diff --git a/docs/SONATA_DEVELOPER_GUIDE.md b/docs/SONATA_DEVELOPER_GUIDE.md index c7a2b5a..fa76ba1 100644 --- a/docs/SONATA_DEVELOPER_GUIDE.md +++ b/docs/SONATA_DEVELOPER_GUIDE.md @@ -844,6 +844,59 @@ The "run" block specifies some global parameters of the simulation run, such as "spike_threshold": -15, }, + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
KeyDescriptionTypeRequiredDefault
tstartStart time of the simulation.floatFalse0.0
tstopStop time of the simulation.floatTrue
dtTime step size.floatTrue
dLFor compartmental cell models, used to define the minimum segment size of each given section. For a section of length L > dL, the section will be partitioned into 1 + 2 \* int(section.L / (2\*dL)) segments.floatFalse
spike_thresholdThe default membrane potential value at which it can be assumed an action potential can be recorded.floatFalse
block_step_sizeUsed by the simulator to determine after how many time steps should it save the simulation and results (assume such behavior is available).intFalse
+ + ### Conditions Configuration This block specifies optional global parameters with reserved meaning associated with manipulation of the "in silico preparation". @@ -1379,4 +1432,3 @@ Allen folks to fill in For the case that the model_template follows the *bmtk* schema, the following is the expected structure of the hoc template. Allen folks to fill in -