Publish docs @ 9b7136d

Author: github-actions[bot]

404.html

@@ -410,6 +410,12 @@
   <a href="/docs/usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="/docs/usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>

changelog.html

@@ -445,6 +445,12 @@
   <a href="./usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>
@@ -675,7 +681,8 @@
     <h2 id="toc-title">Table of Contents</h2>
 
   <ul>
-  <li><a href="#release-0.38.3" id="toc-release-0.38.3" class="nav-link active" data-scroll-target="#release-0.38.3">Release 0.38.3</a></li>
+  <li><a href="#release-0.38.4" id="toc-release-0.38.4" class="nav-link active" data-scroll-target="#release-0.38.4">Release 0.38.4</a></li>
+  <li><a href="#release-0.38.3" id="toc-release-0.38.3" class="nav-link" data-scroll-target="#release-0.38.3">Release 0.38.3</a></li>
   <li><a href="#release-0.38.2" id="toc-release-0.38.2" class="nav-link" data-scroll-target="#release-0.38.2">Release 0.38.2</a></li>
   <li><a href="#release-0.38.1" id="toc-release-0.38.1" class="nav-link" data-scroll-target="#release-0.38.1">Release 0.38.1</a></li>
   <li><a href="#release-0.38.0" id="toc-release-0.38.0" class="nav-link" data-scroll-target="#release-0.38.0">Release 0.38.0</a>
@@ -743,6 +750,10 @@ <h1 class="title">Changelog</h1>
 </header>
 
 
+<section id="release-0.38.4" class="level1">
+<h1>Release 0.38.4</h1>
+<p>The minimum Julia version was increased to 1.10.2 (from 1.10.0). On versions before 1.10.2, <code>sample()</code> took an excessively long time to run (probably due to compilation).</p>
+</section>
 <section id="release-0.38.3" class="level1">
 <h1>Release 0.38.3</h1>
 <p><code>getparams(::Model, ::AbstractVarInfo)</code> now returns an empty <code>Float64[]</code> if the VarInfo contains no parameters.</p>

core-functionality/index.html

@@ -447,6 +447,12 @@
   <a href="../../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>

developers/compiler/design-overview/index.html

@@ -476,6 +476,12 @@
   <a href="../../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>
@@ -958,16 +964,16 @@ <h1>Consider a probabilistic model defined by</h1>
  <span class="ansi-bold"> parameters  </span><span class="ansi-bold">    mean  </span><span class="ansi-bold">     std  </span><span class="ansi-bold">    mcse  </span><span class="ansi-bold">    ess_bulk  </span><span class="ansi-bold">    ess_tail  </span><span class="ansi-bold">    rh ⋯
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float ⋯
 
-           a    0.9769    0.9004    0.0032    81244.2436   122647.4335    1.00 ⋯
-           b    2.8809    0.4883    0.0012   172245.2903   211219.4504    1.00 ⋯
+           a    0.9706    0.8981    0.0031    81774.5741   121491.7468    1.00 ⋯
+           b    2.8795    0.4881    0.0012   172551.8474   209481.3251    1.00 ⋯
 </span><span class="ansi-cyan-fg ansi-bold">                                                               2 columns omitted
 
 Quantiles
  </span><span class="ansi-cyan-fg ansi-bold"> parameters  </span><span class="ansi-cyan-fg ansi-bold">    2.5%  </span><span class="ansi-cyan-fg ansi-bold">   25.0%  </span><span class="ansi-cyan-fg ansi-bold">   50.0%  </span><span class="ansi-cyan-fg ansi-bold">   75.0%  </span><span class="ansi-cyan-fg ansi-bold">   97.5%
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64
 
-           a   -0.7865    0.3683    0.9770    1.5825    2.7445
-           b    1.9234    2.5525    2.8824    3.2096    3.8367
+           a   -0.7923    0.3644    0.9700    1.5762    2.7266
+           b    1.9246    2.5493    2.8800    3.2076    3.8382
 </span></pre>
 </div>
 </div>
@@ -992,25 +998,25 @@ <h1>Consider a probabilistic model defined by</h1>
 Iterations        = 1:1:1000000
 Number of chains  = 1
 Samples per chain = 1000000
-Wall duration     = 25.82 seconds
-Compute duration  = 25.82 seconds
+Wall duration     = 25.81 seconds
+Compute duration  = 25.81 seconds
 parameters        = a, b
 internals         = lp
 
 Summary Statistics
  <span class="ansi-bold"> parameters  </span><span class="ansi-bold">    mean  </span><span class="ansi-bold">     std  </span><span class="ansi-bold">    mcse  </span><span class="ansi-bold">    ess_bulk  </span><span class="ansi-bold">    ess_tail  </span><span class="ansi-bold">    rh ⋯
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float ⋯
 
-           a    0.9765    0.9012    0.0032    80296.4252   122319.1202    1.00 ⋯
-           b    2.8802    0.4875    0.0012   176118.6556   216825.6425    1.00 ⋯
+           a    0.9761    0.8981    0.0032    81204.1326   122212.1574    1.00 ⋯
+           b    2.8813    0.4875    0.0012   173774.9292   213582.8354    1.00 ⋯
 </span><span class="ansi-cyan-fg ansi-bold">                                                               2 columns omitted
 
 Quantiles
  </span><span class="ansi-cyan-fg ansi-bold"> parameters  </span><span class="ansi-cyan-fg ansi-bold">    2.5%  </span><span class="ansi-cyan-fg ansi-bold">   25.0%  </span><span class="ansi-cyan-fg ansi-bold">   50.0%  </span><span class="ansi-cyan-fg ansi-bold">   75.0%  </span><span class="ansi-cyan-fg ansi-bold">   97.5%
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64
 
-           a   -0.7955    0.3694    0.9756    1.5847    2.7430
-           b    1.9247    2.5514    2.8795    3.2079    3.8402
+           a   -0.7848    0.3704    0.9729    1.5821    2.7381
+           b    1.9276    2.5535    2.8807    3.2101    3.8379
 </span></pre>
 </div>
 </div>

developers/compiler/minituring-compiler/index.html

@@ -447,6 +447,12 @@
   <a href="../../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>
@@ -974,16 +980,16 @@ <h2 class="anchored" data-anchor-id="contexts-within-contexts">Contexts within c
  <span class="ansi-bold"> parameters  </span><span class="ansi-bold">    mean  </span><span class="ansi-bold">     std  </span><span class="ansi-bold">    mcse  </span><span class="ansi-bold">    ess_bulk  </span><span class="ansi-bold">    ess_tail  </span><span class="ansi-bold">    rh ⋯
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float ⋯
 
-           a    0.9765    0.8985    0.0032    79298.8071   121621.7959    1.00 ⋯
-           b    2.8819    0.4887    0.0012   172490.3835   215732.0896    1.00 ⋯
+           a    0.9742    0.9010    0.0032    79229.8146   120244.6012    1.00 ⋯
+           b    2.8821    0.4877    0.0012   174178.5871   216857.5149    1.00 ⋯
 </span><span class="ansi-cyan-fg ansi-bold">                                                               2 columns omitted
 
 Quantiles
  </span><span class="ansi-cyan-fg ansi-bold"> parameters  </span><span class="ansi-cyan-fg ansi-bold">    2.5%  </span><span class="ansi-cyan-fg ansi-bold">   25.0%  </span><span class="ansi-cyan-fg ansi-bold">   50.0%  </span><span class="ansi-cyan-fg ansi-bold">   75.0%  </span><span class="ansi-cyan-fg ansi-bold">   97.5%
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64
 
-           a   -0.7849    0.3699    0.9756    1.5826    2.7404
-           b    1.9276    2.5513    2.8812    3.2114    3.8401
+           a   -0.7937    0.3670    0.9729    1.5806    2.7456
+           b    1.9275    2.5518    2.8823    3.2112    3.8409
 </span></pre>
 </div>
 </div>
@@ -1004,16 +1010,16 @@ <h2 class="anchored" data-anchor-id="contexts-within-contexts">Contexts within c
  <span class="ansi-bold"> parameters  </span><span class="ansi-bold">    mean  </span><span class="ansi-bold">     std  </span><span class="ansi-bold">    mcse  </span><span class="ansi-bold">   ess_bulk  </span><span class="ansi-bold">    ess_tail  </span><span class="ansi-bold">    rha ⋯
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">    Float64  </span><span class="ansi-bright-black-fg ansi-bold">     Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float6 ⋯
 
-           a    0.4994    0.9988    0.0039   64322.5574   124912.6651    1.000 ⋯
-           b    0.5125    2.2285    0.0135   27159.5725    50642.3780    1.000 ⋯
+           a    0.5020    0.9979    0.0039   65176.4252   129103.4002    1.000 ⋯
+           b    0.5093    2.2245    0.0135   26959.6308    52574.9810    1.000 ⋯
 </span><span class="ansi-cyan-fg ansi-bold">                                                               2 columns omitted
 
 Quantiles
  </span><span class="ansi-cyan-fg ansi-bold"> parameters  </span><span class="ansi-cyan-fg ansi-bold">    2.5%  </span><span class="ansi-cyan-fg ansi-bold">   25.0%  </span><span class="ansi-cyan-fg ansi-bold">   50.0%  </span><span class="ansi-cyan-fg ansi-bold">   75.0%  </span><span class="ansi-cyan-fg ansi-bold">   97.5%
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64
 
-           a   -1.4532   -0.1762    0.4978    1.1744    2.4576
-           b   -3.8436   -0.9940    0.5008    2.0170    4.8876
+           a   -1.4545   -0.1724    0.5000    1.1779    2.4548
+           b   -3.8398   -0.9896    0.5017    2.0106    4.8784
 </span></pre>
 </div>
 </div>

developers/compiler/minituring-contexts/index.html

@@ -447,6 +447,12 @@
   <a href="../../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>
@@ -771,25 +777,25 @@ <h1 class="title">Manually Defining a Model</h1>
 Iterations        = 501:1:1500
 Number of chains  = 1
 Samples per chain = 1000
-Wall duration     = 6.82 seconds
-Compute duration  = 6.82 seconds
+Wall duration     = 7.59 seconds
+Compute duration  = 7.59 seconds
 parameters        = s², m
 internals         = lp, n_steps, is_accept, acceptance_rate, log_density, hamiltonian_energy, hamiltonian_energy_error, max_hamiltonian_energy_error, tree_depth, numerical_error, step_size, nom_step_size
 
 Summary Statistics
  <span class="ansi-bold"> parameters  </span><span class="ansi-bold">    mean  </span><span class="ansi-bold">     std  </span><span class="ansi-bold">    mcse  </span><span class="ansi-bold"> ess_bulk  </span><span class="ansi-bold"> ess_tail  </span><span class="ansi-bold">    rhat  </span><span class="ansi-bold"> e ⋯
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">  Float64  </span><span class="ansi-bright-black-fg ansi-bold">  Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold">   ⋯
 
-          s²    2.0937    2.0708    0.0957   629.6587   433.4490    1.0050     ⋯
-           m    1.1447    0.8222    0.0380   487.0383   380.4005    1.0051     ⋯
+          s²    2.0553    2.0907    0.1052   432.9659   437.2805    1.0027     ⋯
+           m    1.2132    0.8167    0.0391   463.6457   423.4252    0.9995     ⋯
 </span><span class="ansi-cyan-fg ansi-bold">                                                                1 column omitted
 
 Quantiles
  </span><span class="ansi-cyan-fg ansi-bold"> parameters  </span><span class="ansi-cyan-fg ansi-bold">    2.5%  </span><span class="ansi-cyan-fg ansi-bold">   25.0%  </span><span class="ansi-cyan-fg ansi-bold">   50.0%  </span><span class="ansi-cyan-fg ansi-bold">   75.0%  </span><span class="ansi-cyan-fg ansi-bold">   97.5%
  </span><span class="ansi-bright-black-fg ansi-bold">     Symbol  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64  </span><span class="ansi-bright-black-fg ansi-bold"> Float64
 
-          s²    0.5612    1.0249    1.5130    2.4141    7.5230
-           m   -0.5281    0.6030    1.1421    1.6804    2.7480
+          s²    0.5649    1.0412    1.5098    2.3231    6.6065
+           m   -0.5878    0.7871    1.1996    1.6877    2.7971
 </span></pre>
 </div>
 </div>

developers/compiler/model-manual/index.html

@@ -447,6 +447,12 @@
   <a href="../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>

developers/contributing/index.html

@@ -447,6 +447,12 @@
   <a href="../../../usage/external-samplers/index.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Using External Samplers</span></a>
   </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../../../usage/troubleshooting/index.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Troubleshooting</span></a>
+  </div>
 </li>
       </ul>
   </li>