enrichKEGG()函数中use_internal_data=TRUE 时通路名没有去掉物种名

[czy1238677]

get_data_from_KEGG_db函数少了这一步: PATHID2NAME.df[,2] <- sub("\\s-\\s[^-]+$", "", PATHID2NAME.df[, 2])

[guidohooiveld]

Good catch! Yet, please realize that the use of the 'internal' data is not recommended, but you rather should download it from the KEGG server on he fly.