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Make Downsample Parameters a Local File Property #13

@guswelter

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@guswelter

Currently, the downsample parameters (M and stepMultiplier, see here) are configured at the application level, and the processed files which contain the downsample data are assumed to be in sync with these parameters.

Please change this so that these parameters are configured per-file and embedded as metadata in the processed files, such that the parameters can vary between files.

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