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fix participant_id column to use sub-<label> (#266)
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genetics_ukbb/participants.tsv

Lines changed: 14 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -1,15 +1,15 @@
11
participant_id age sex group genetic_id IDH BatchID VariationSetType Assembly GeneticDataType
2-
S000001 48 M patient 125425 yes b001 CNV hg38 SNP_intensity
3-
S000002 60 M control 125698 no b001 CNV hg38 SNP_intensity
4-
S000003 72 M patient 452589 yes b002 SNV/CNV hg19/hg38 WES/SNP_intensity
5-
S000004 84 F patient 325478 no b002 CNV hg38 SNP_intensity
6-
S000005 89+ M control 623589 yes b002 SNV/CNV hg19/hg38 WES/SNP_intensity
7-
S000006 89+ F patient 458712 no b003 SNV hg19 WES
8-
S000007 89+ M patient 985632 yes b004 SNV hg19 WES
9-
S000008 60 F control 325687 yes b004 CNV hg38 SNP_intensity
10-
S000009 48 F patient 753159 no b005 SNV/CNV hg19/hg38 WES/SNP_intensity
11-
S000010 84 F control 654852 yes b005 SNV hg19 WES
12-
S000011 60 M control 648279 yes b005 SNV/CNV hg19/hg38 WES/SNP_intensity
13-
S000012 36 F control 468231 yes b005 SNV/CNV hg19/hg38 WES/SNP_intensity
14-
S000013 89+ M patient 225587 no b001 SNV/CNV hg19/hg38 WES/SNP_intensity
15-
S000014 84 M control 664458 yes b002 CNV hg38 SNP_intensity
2+
sub-01 48 M patient 125425 yes b001 CNV hg38 SNP_intensity
3+
sub-02 60 M control 125698 no b001 CNV hg38 SNP_intensity
4+
sub-03 72 M patient 452589 yes b002 SNV/CNV hg19/hg38 WES/SNP_intensity
5+
sub-04 84 F patient 325478 no b002 CNV hg38 SNP_intensity
6+
sub-05 89+ M control 623589 yes b002 SNV/CNV hg19/hg38 WES/SNP_intensity
7+
sub-06 89+ F patient 458712 no b003 SNV hg19 WES
8+
sub-07 89+ M patient 985632 yes b004 SNV hg19 WES
9+
sub-08 60 F control 325687 yes b004 CNV hg38 SNP_intensity
10+
sub-09 48 F patient 753159 no b005 SNV/CNV hg19/hg38 WES/SNP_intensity
11+
sub-10 84 F control 654852 yes b005 SNV hg19 WES
12+
sub-11 60 M control 648279 yes b005 SNV/CNV hg19/hg38 WES/SNP_intensity
13+
sub-12 36 F control 468231 yes b005 SNV/CNV hg19/hg38 WES/SNP_intensity
14+
sub-13 89+ M patient 225587 no b001 SNV/CNV hg19/hg38 WES/SNP_intensity
15+
sub-14 84 M control 664458 yes b002 CNV hg38 SNP_intensity
Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -1,8 +1,8 @@
11
participant_id age gender
2-
cm4 37.0 f
3-
jh17 37.0 f
4-
cm8 22.0 f
5-
jh19 51.0 f
6-
ir05 38.0 m
7-
ir07 23.0 m
8-
ir08 51.0 m
2+
sub-cm4 37.0 f
3+
sub-jh17 37.0 f
4+
sub-cm8 22.0 f
5+
sub-jh19 51.0 f
6+
sub-ir05 38.0 m
7+
sub-ir07 23.0 m
8+
sub-ir08 51.0 m

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