diff --git a/GenomeFileUtil.spec b/GenomeFileUtil.spec index 05cca1f9..5971b43d 100644 --- a/GenomeFileUtil.spec +++ b/GenomeFileUtil.spec @@ -318,6 +318,7 @@ module GenomeFileUtil { returns (MetagenomeSaveResult returnVal) authentication required; typedef structure { + int workspace_id; string workspace; string name; KBaseGenomes.Genome data; diff --git a/lib/GenomeFileUtil/GenomeFileUtilImpl.py b/lib/GenomeFileUtil/GenomeFileUtilImpl.py index 0d01dd6e..b41f4d82 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilImpl.py +++ b/lib/GenomeFileUtil/GenomeFileUtilImpl.py @@ -69,7 +69,7 @@ class GenomeFileUtil: ######################################### noqa VERSION = "0.11.7" GIT_URL = "git@github.com:kbaseapps/GenomeFileUtil.git" - GIT_COMMIT_HASH = "591a19ccf4d1b42f01cc06486654b6d3a8ea08e4" + GIT_COMMIT_HASH = "861a50b5ce2d0b8b481fe514b41a6d6b89ee0c96" #BEGIN_CLASS_HEADER #END_CLASS_HEADER @@ -831,27 +831,27 @@ def fasta_gff_to_metagenome(self, ctx, params): def save_one_genome(self, ctx, params): """ :param params: instance of type "SaveOneGenomeParams" -> structure: - parameter "workspace" of String, parameter "name" of String, - parameter "data" of type "Genome" (Genome type -- annotated and - assembled genome data. Field descriptions: id - string - KBase - legacy data ID scientific_name - string - human readable species - name domain - string - human readable phylogenetic domain name - (eg. "Bacteria") warnings - list of string - genome-level warnings - generated in the annotation process genome_tiers - list of string - - controlled vocabulary (based on app input and checked by - GenomeFileUtil) A list of labels describing the data source for - this genome. Allowed values - Representative, Reference, - ExternalDB, User Tier assignments based on genome source: * All - phytozome - Representative and ExternalDB * Phytozome flagship - genomes - Reference, Representative and ExternalDB * Ensembl - - Representative and ExternalDB * RefSeq Reference - Reference, - Representative and ExternalDB * RefSeq Representative - - Representative and ExternalDB * RefSeq Latest or All Assemblies - folder - ExternalDB * User Data - User tagged feature_counts - map - of string to integer - total counts of each type of feature keys - are a controlled vocabulary of - "CDS", "gene", "misc_feature", - "misc_recomb", "mobile_element", "ncRNA" - 72, - "non_coding_features", "non_coding_genes", + parameter "workspace_id" of Long, parameter "workspace" of String, + parameter "name" of String, parameter "data" of type "Genome" + (Genome type -- annotated and assembled genome data. Field + descriptions: id - string - KBase legacy data ID scientific_name - + string - human readable species name domain - string - human + readable phylogenetic domain name (eg. "Bacteria") warnings - list + of string - genome-level warnings generated in the annotation + process genome_tiers - list of string - controlled vocabulary + (based on app input and checked by GenomeFileUtil) A list of + labels describing the data source for this genome. Allowed values + - Representative, Reference, ExternalDB, User Tier assignments + based on genome source: * All phytozome - Representative and + ExternalDB * Phytozome flagship genomes - Reference, + Representative and ExternalDB * Ensembl - Representative and + ExternalDB * RefSeq Reference - Reference, Representative and + ExternalDB * RefSeq Representative - Representative and ExternalDB + * RefSeq Latest or All Assemblies folder - ExternalDB * User Data + - User tagged feature_counts - map of string to integer - total + counts of each type of feature keys are a controlled vocabulary of + - "CDS", "gene", "misc_feature", "misc_recomb", "mobile_element", + "ncRNA" - 72, "non_coding_features", "non_coding_genes", "protein_encoding_gene", "rRNA", "rep_origin", "repeat_region", "tRNA" genetic_code - int - An NCBI-assigned taxonomic category for the organism See here - diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index d1851a61..d5e42b55 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -22,7 +22,8 @@ from installed_clients.WorkspaceClient import Workspace from GenomeFileUtil.core.GenomeUtils import ( is_parent, propagate_cds_props_to_gene, warnings, parse_inferences, - load_ontology_mappings, set_taxon_data, set_default_taxon_data + load_ontology_mappings, set_taxon_data, set_default_taxon_data, + set_up_single_params, validate_mass_params ) MAX_MISC_FEATURE_SIZE = 10000 @@ -113,52 +114,16 @@ def __init__(self, config): def import_genbank(self, params): print('validating parameters') - mass_params = self._set_up_single_params(params) + mass_params = set_up_single_params( + params, _WSNAME, self._validate_params, self.dfu.ws_name_to_id + ) return self._import_genbank_mass(mass_params)[0] def import_genbank_mass(self, params): print('validating parameters') - self._validate_mass_params(params) + validate_mass_params(params, self._validate_params) return self._import_genbank_mass(params) - def _set_up_single_params(self, params): - # avoid side effects and keep variables in params unmodfied - inputs = dict(params) - self._validate_params(inputs) - ws_id = self._get_int(inputs.pop(_WSID, None), _WSID) - ws_name = inputs.pop(_WSNAME, None) - if (bool(ws_id) == bool(ws_name)): # xnor - raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WSNAME}' parameter must be provided") - if not ws_id: - print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " - + "a workspace ID over a mutable workspace name that may cause race conditions") - ws_id = self.dfu.ws_name_to_id(ws_name) - mass_params = {_WSID: ws_id, _INPUTS: [inputs]} - return mass_params - - def _validate_mass_params(self, params): - ws_id = self._get_int(params.get(_WSID), _WSID) - if not ws_id: - raise ValueError(f"{_WSID} is required") - inputs = params.get(_INPUTS) - if not inputs or type(inputs) is not list: - raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") - for i, inp in enumerate(inputs, start=1): - if type(inp) is not dict: - raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") - try: - self._validate_params(inp) - except Exception as e: - raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e - - def _get_int(self, putative_int, name, minimum=1): - if putative_int is not None: - if type(putative_int) is not int: - raise ValueError(f"{name} must be an integer, got: {putative_int}") - if putative_int < minimum: - raise ValueError(f"{name} must be an integer >= {minimum}") - return putative_int - def _import_genbank_mass(self, params): workspace_id = params[_WSID] @@ -197,6 +162,12 @@ def _import_genbank_mass(self, params): # parse genbank file self._parse_genbank(genome_obj) + # check features + self.gi.check_dna_sequence_in_features(genome_obj.genome_data) + + # validate genome + genome_obj.genome_data['warnings'] = self.gi.validate_genome(genome_obj.genome_data) + # gather all objects genome_objs.append(genome_obj) @@ -209,7 +180,6 @@ def _import_genbank_mass(self, params): for genome_obj in genome_objs: shutil.rmtree(genome_obj.input_directory) - # TODO make an internal mass function save_genomes results = self._save_genomes(workspace_id, genome_objs) # return the result @@ -227,17 +197,18 @@ def _import_genbank_mass(self, params): return details def _save_genomes(self, workspace_id, genome_objs): - results = [ - self.gi.save_one_genome( - { - 'workspace': workspace_id, - 'name': genome_obj.genome_name, - 'data': genome_obj.genome_data, - "meta": genome_obj.genome_meta, - } - ) for genome_obj in genome_objs - ] - + results = self.gi.save_genome_mass( + { + "workspace_id": workspace_id, + "inputs": [ + { + "name": genome_obj.genome_name, + "data": genome_obj.genome_data, + "meta": genome_obj.genome_meta, + } for genome_obj in genome_objs + ], + } + ) return results def _validate_params(self, params): diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index def9a499..1479b11c 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -16,6 +16,10 @@ MAX_GENOME_SIZE = 2**30 +_WS = "workspace" +_WSID = "workspace_id" +_INPUTS = "inputs" + class GenomeInterface: def __init__(self, config): @@ -32,18 +36,58 @@ def __init__(self, config): self.scratch = config.raw['scratch'] self.ws_large_data = WsLargeDataIO(self.callback_url) - @staticmethod - def _validate_save_one_genome_params(params): + def save_one_genome(self, params): + """ + Saves a single genome object to the workspace. + + This method prepares and validates the necessary parameters for saving a genome. + It then executes the saving process and returns relevant information about the saved genome. + + Args: + params (dict): A dictionary containing the parameters for saving the genome. + Must include workspace and genome-specific information. + + Returns: + dict: The information about the saved genome object, including metadata. """ - _validate_save_one_genome_params: - validates params passed to save_one_genome method + mass_params = GenomeUtils.set_up_single_params( + params, _WS, self._validate_genome_input_params, self.dfu.ws_name_to_id + ) + return self._save_genome_mass(mass_params)[0] + + def save_genome_mass(self, params, validate_genome=False): + """ + Saves multiple genome objects to the workspace. + + This method handles the saving of multiple genome objects in bulk. It validates + the parameters, processes each genome individually, and performs necessary + updates or validations before saving. If requested, it will also validate the + genomes before saving. + + # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, + # the workspace service request will fail. + + Args: + params (dict): A dictionary containing the parameters for saving the genomes. + Should include workspace ID and a list of genome inputs with their data. + validate_genome (bool, optional): A flag indicating whether to validate the + genomes before saving. Defaults to False. + + Returns: + list: A list of dictionaries, each containing information about a saved + genome object and any warnings encountered during the saving process. + """ + GenomeUtils.validate_mass_params(params, self._validate_genome_input_params) + return self._save_genome_mass(params, validate_genome=validate_genome) + + def _validate_genome_input_params(self, genome_input): + """ + Check required parameters are in genome_input """ - logging.info('start validating save_one_genome params') # check for required parameters - for p in ['workspace', 'name', 'data']: - if p not in params: - raise ValueError( - '"{}" parameter is required, but missing'.format(p)) + for p in ["name", "data"]: + if p not in genome_input: + raise ValueError(f"{p} parameter is required, but missing") def _check_shock_response(self, response, errtxt): """ @@ -90,11 +134,10 @@ def _own_handle(self, genome_data, handle_property): handle_id = dfu_shock['handle']['hid'] genome_data[handle_property] = handle_id - def _check_dna_sequence_in_features(self, genome): + def check_dna_sequence_in_features(self, genome): """ - _check_dna_sequence_in_features: check dna sequence in each feature + check_dna_sequence_in_features: check dna sequence in each feature """ - logging.info('start checking dna sequence in each feature') if 'features' in genome: features_to_work = {} @@ -128,54 +171,73 @@ def get_one_genome(self, params): return data, res['info'] # return self.dfu.get_objects(params)['data'][0] - def save_one_genome(self, params): - logging.info('start saving genome object') - self._validate_save_one_genome_params(params) - workspace = params['workspace'] - name = params['name'] - data = params['data'] - # XXX there is no `workspace_datatype` param in the spec - ws_datatype = params.get('workspace_datatype', "KBaseGenomes.Genome") - # XXX there is no `meta` param in the spec - meta = params.get('meta', {}) - if "AnnotatedMetagenomeAssembly" in ws_datatype: - if params.get('upgrade') or 'feature_counts' not in data: - data = self._update_metagenome(data) - else: - if params.get('upgrade') or 'feature_counts' not in data: - data = self._update_genome(data) - - # check all handles point to shock nodes owned by calling user - self._own_handle(data, 'genbank_handle_ref') - self._own_handle(data, 'gff_handle_ref') - if "AnnotatedMetagenomeAssembly" not in ws_datatype: - self._check_dna_sequence_in_features(data) - data['warnings'] = self.validate_genome(data) - - # sort data - data = GenomeUtils.sort_dict(data) - # dump genome to scratch for upload - data_path = os.path.join(self.scratch, name + ".json") - json.dump(data, open(data_path, 'w')) - if 'hidden' in params and str(params['hidden']).lower() in ('yes', 'true', 't', '1'): - hidden = 1 - else: - hidden = 0 - - if isinstance(workspace, int) or workspace.isdigit(): - workspace_id = workspace - else: - workspace_id = self.dfu.ws_name_to_id(workspace) - - save_params = {'id': workspace_id, - 'objects': [{'type': ws_datatype, - 'data_json_file': data_path, - 'name': name, - 'meta': meta, - 'hidden': hidden}]} - dfu_oi = self.ws_large_data.save_objects(save_params)[0] - returnVal = {'info': dfu_oi, 'warnings': data.get('warnings', [])} - return returnVal + def _save_genome_mass(self, params, validate_genome=True): + + workspace_id = params[_WSID] + inputs = params[_INPUTS] + + objects = [] + warnings = [] + + for input_params in inputs: + + obj = {} + + # retrive required params + name = input_params['name'] + data = dict(input_params['data']) + + # XXX there is no `workspace_datatype` param in the spec + # NOTE: This allows a user to specify any arbitrary workspace type which could cause, + # in the worst case, data corruption. It should be removed from the API + # (note it is not currently documented) so users cannot access it. + ws_datatype = input_params.get('workspace_datatype', "KBaseGenomes.Genome") + # XXX there is no `meta` param in the spec + meta = input_params.get('meta', {}) + + obj["type"] = ws_datatype + obj["name"] = name + obj["meta"] = meta + + if "AnnotatedMetagenomeAssembly" in ws_datatype: + if input_params.get('upgrade') or 'feature_counts' not in data: + data = self._update_metagenome(data) + else: + if input_params.get('upgrade') or 'feature_counts' not in data: + data = self._update_genome(data) + + # check all handles point to shock nodes owned by calling user + self._own_handle(data, 'genbank_handle_ref') + self._own_handle(data, 'gff_handle_ref') + if "AnnotatedMetagenomeAssembly" not in ws_datatype and validate_genome: + self.check_dna_sequence_in_features(data) + data['warnings'] = self.validate_genome(data) + + # sort data + data = GenomeUtils.sort_dict(data) + # dump genome to scratch for upload + data_path = os.path.join(self.scratch, name + ".json") + json.dump(data, open(data_path, 'w')) + if 'hidden' in input_params and str(input_params['hidden']).lower() in ('yes', 'true', 't', '1'): + hidden = 1 + else: + hidden = 0 + + obj["data_json_file"] = data_path + obj["hidden"] = hidden + + objects.append(obj) + warnings.append(data.get('warnings', [])) + + dfu_infos = self.ws_large_data.save_objects( + {'id': workspace_id, 'objects': objects} + ) + + output = [ + {'info': dfu_oi, 'warnings': warning} + for dfu_oi, warning in zip(dfu_infos, warnings) + ] + return output @staticmethod def determine_tier(source): @@ -207,6 +269,7 @@ def _update_metagenome(self, genome): """Checks for missing required fields and fixes breaking changes""" if 'molecule_type' not in genome: genome['molecule_type'] = 'Unknown' + return genome def _update_genome(self, genome): """Checks for missing required fields and fixes breaking changes""" @@ -345,8 +408,6 @@ def validate_genome(g): """ allowed_tiers = {'Representative', 'Reference', 'ExternalDB', 'User'} - - logging.info('Validating genome object contents') warnings = g.get('warnings', []) # TODO: Determine whether these checks make any sense for Metagenome diff --git a/lib/GenomeFileUtil/core/GenomeUtils.py b/lib/GenomeFileUtil/core/GenomeUtils.py index 0ffeae29..d75e9967 100644 --- a/lib/GenomeFileUtil/core/GenomeUtils.py +++ b/lib/GenomeFileUtil/core/GenomeUtils.py @@ -3,13 +3,18 @@ import os import re import time +from typing import Callable, Dict, Any from relation_engine_client import REClient from relation_engine_client.exceptions import RENotFound +from GenomeFileUtil.core.MiscUtils import get_int # Name of the ncbi taxonomy namespace stored in "taxon_assignments" _NCBI_TAX = 'ncbi' +_WSID = 'workspace_id' +_INPUTS = 'inputs' + warnings = { "cds_excluded": "SUSPECT: CDS from {} was excluded because the associated " "CDS failed coordinates validation", @@ -482,4 +487,89 @@ def set_taxon_data(tax_id, re_api_url, genome_dict): ) # Assign the scientific name to the most specific (right-most) taxon in the lineage genome_dict['scientific_name'] = sciname - \ No newline at end of file + + +def set_up_single_params( + params: Dict[str, Any], + ws: str, + validate_params_func: Callable[[Dict[str, Any]], None], + ws_name_to_id_func: Callable[[str], int] +) -> Dict[str, Any]: + """ + Sets up parameters by validating them and ensuring that exactly one of workspace ID or name is provided. + + Args: + params (Dict[str, Any]): A dictionary where the keys are parameter names (strings) and the values + can be of any type. + ws (str): A string representing the key for the workspace name or identifier. + validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters + and validates them. This function should raise an exception if the parameters are invalid. + ws_name_to_id_func (Callable[[str], int]): A function that takes a workspace name (string) and returns + its corresponding ID (integer). + + Returns: + Dict[str, Any]: A dictionary containing the workspace ID and the processed parameters. The dictionary + has keys workspace_id and inputs, where workspace_id is the workspace ID and inputs is a list containing + the input parameters. + + Raises: + ValueError: If neither or both the workspace ID and workspace name are provided in the parameters. + + Notes: + - If a workspace ID is not provided, the function will attempt to convert the workspace name to an ID + using `ws_name_to_id_func`. + - It is preferable to provide a workspace ID directly to avoid potential race conditions with mutable + workspace names. + """ + inputs = dict(params) + validate_params_func(inputs) + ws_id = get_int(inputs.pop(_WSID, None), _WSID) + ws_name = inputs.pop(ws, None) + if bool(ws_id) == bool(ws_name): # xnor + raise ValueError(f"Exactly one of a '{_WSID}' or a '{ws}' parameter must be provided") + if not ws_id: + print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " + + "a workspace ID over a mutable workspace name that may cause race conditions") + ws_id = ws_name_to_id_func(ws_name) + mass_params = {_WSID: ws_id, _INPUTS: [inputs]} + return mass_params + + +def validate_mass_params( + params: Dict[str, Any], + validate_params_func: Callable[[Dict[str, Any]], None] +) -> None: + """ + Validates the provided parameters according to specific rules. + + Args: + params (Dict[str, Any]): A dictionary containing parameters to validate. Must include: + - workspace_id: A workspace ID, which must be present and valid. + - inputs: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. + + validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters + and validates it. The function should raise an exception if the parameters are invalid. + + Raises: + ValueError: If workspace_id is missing or invalid, if inputs is missing or not a non-empty list, or if any + entry in inputs is not a dictionary or fails validation. + + Notes: + - The function checks that workspace_id is present and converts it to an integer using `get_int`. + - The inputs field must be a non-empty list of dictionaries. Each dictionary in the list is validated + using `validate_params_func`. + - If any validation fails, a `ValueError` is raised with a message indicating the issue and entry index. + """ + ws_id = get_int(params.get(_WSID), _WSID) + if not ws_id: + raise ValueError(f"{_WSID} is required") + inputs = params.get(_INPUTS) + if not inputs or type(inputs) != list: + raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") + for i, inp in enumerate(inputs, start=1): + if type(inp) != dict: + raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") + try: + validate_params_func(inp) + except Exception as e: + raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e \ No newline at end of file diff --git a/lib/GenomeFileUtil/core/MiscUtils.py b/lib/GenomeFileUtil/core/MiscUtils.py index a34eb6f7..e99a7b71 100644 --- a/lib/GenomeFileUtil/core/MiscUtils.py +++ b/lib/GenomeFileUtil/core/MiscUtils.py @@ -12,3 +12,29 @@ def validate_lists_have_same_elements(l1, l2): diff = set(l1) ^ (set(l2)) # get the symmetric difference of the sets # check if all ids are shared return len(diff) == 0 + + +def get_int(putative_int, name, minimum=1): + """ + Validates and returns an integer value. + + This function checks whether the provided value is an integer and if it meets the specified minimum value. + If the checks are not passed, it raises a `ValueError` with a descriptive message. + + Args: + putative_int (int or None): The value to be validated and returned. If `None`, it will be returned as is. + name (str): A descriptive name for the value being checked. This is used in error messages. + minimum (int, optional): The minimum acceptable value for `putative_int`. Defaults to 1. + + Returns: + int: The validated integer if all checks are passed. + + Raises: + ValueError: If `putative_int` is not an integer, or if it is less than `minimum`. + """ + if putative_int is not None: + if type(putative_int) is not int: + raise ValueError(f"{name} must be an integer, got: {putative_int}") + if putative_int < minimum: + raise ValueError(f"{name} must be an integer >= {minimum}") + return putative_int diff --git a/test/data/e_coli/e_coli_with_assembly_curated.json b/test/data/e_coli/e_coli_with_assembly_curated.json new file mode 100644 index 00000000..c268fd8a --- /dev/null +++ b/test/data/e_coli/e_coli_with_assembly_curated.json @@ -0,0 +1,288028 @@ +{ + "cdss": [ + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000006" + ], + [ + "gene_synonym", + "ECK0001" + ], + [ + "gene_synonym", + "EcoGene:EG11277" + ], + [ + "gene_synonym", + "GI:16127995" + ], + [ + "gene_synonym", + "GeneID:944742" + ], + [ + "gene_synonym", + "JW4367" + ], + [ + "gene_synonym", + "NP_414542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD86" + ], + [ + "gene_synonym", + "b0001" + ], + [ + "gene_synonym", + "thrL" + ] + ], + "dna_sequence": "ATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGA", + "dna_sequence_length": 66, + "functions": [ + "thr operon leader peptide" + ], + "id": "CDS_1", + "location": [ + [ + "NC_000913", + 190, + "+", + 66 + ] + ], + "md5": "cd572f0df722f00fc2123c68f381b98b", + "parent_gene": "", + "protein_md5": "13fe4258b37e32edda386faa50ec5fdf", + "protein_translation": "MKRISTTITTTITITTGNGAG", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000008" + ], + [ + "gene_synonym", + "ECK0002" + ], + [ + "gene_synonym", + "EcoGene:EG10998" + ], + [ + "gene_synonym", + "GI:16127996" + ], + [ + "gene_synonym", + "GeneID:945803" + ], + [ + "gene_synonym", + "Hs" + ], + [ + "gene_synonym", + "JW0001" + ], + [ + "gene_synonym", + "NP_414543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00561" + ], + [ + "gene_synonym", + "b0002" + ], + [ + "gene_synonym", + "thrA" + ], + [ + "gene_synonym", + "thrA1" + ], + [ + "gene_synonym", + "thrA2" + ], + [ + "gene_synonym", + "thrD" + ] + ], + "dna_sequence": "ATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAACGTATTTTTGCCGAACTTTTGACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCGCAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAAACATGTCCTGCATGGCATTAGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAAATGTCGATCGCCATTATGGCCGGCGTATTAGAAGCGCGCGGTCACAACGTTACTGTTATCGATCCGGTCGAAAAACTGCTGGCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCTGAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGATCACATGGTGCTGATGGCAGGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGCAACGGTTCCGACTACTCTGCTGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGACGTTGACGGGGTCTATACCTGCGACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGCTAAAGTTCTTCACCCCCGCACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCTCAAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATCTGAATAACATGGCAATGTTCAGCGTTTCTGGTCCGGGGATGAAAGGGATGGTCGGCATGGCGGCGCGCGTCTTTGCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGAAATGGGTTATACCGAACCGGACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCCGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAACTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAATATTGATGAAGATGGCGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGTAATGATCCGCTGTTCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTCTATAGCCACTATTATCAGCCGCTGCCGTTGGTACTGCGCGGATATGGTGCGGGCAATGACGTTACAGCTGCCGGTGTCTTTGCTGATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGA", + "dna_sequence_length": 2463, + "functions": [ + "Bifunctional aspartokinase/homoserine dehydrogenase 1" + ], + "id": "CDS_2", + "location": [ + [ + "NC_000913", + 337, + "+", + 2463 + ] + ], + "md5": "20d5afda58d5cfdaa163c62921443e25", + "parent_gene": "", + "protein_md5": "0f66dc2b3024a9739d0e912fde12b8ba", + "protein_translation": "MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV", + "protein_translation_length": 820, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000010" + ], + [ + "gene_synonym", + "ECK0003" + ], + [ + "gene_synonym", + "EcoGene:EG10999" + ], + [ + "gene_synonym", + "GI:16127997" + ], + [ + "gene_synonym", + "GeneID:947498" + ], + [ + "gene_synonym", + "JW0002" + ], + [ + "gene_synonym", + "NP_414544.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00547" + ], + [ + "gene_synonym", + "b0003" + ], + [ + "gene_synonym", + "thrB" + ] + ], + "dna_sequence": "ATGGTTAAAGTTTATGCCCCGGCTTCCAGTGCCAATATGAGCGTCGGGTTTGATGTGCTCGGGGCGGCGGTGACACCTGTTGATGGTGCATTGCTCGGAGATGTAGTCACGGTTGAGGCGGCAGAGACATTCAGTCTCAACAACCTCGGACGCTTTGCCGATAAGCTGCCGTCAGAACCACGGGAAAATATCGTTTATCAGTGCTGGGAGCGTTTTTGCCAGGAACTGGGTAAGCAAATTCCAGTGGCGATGACCCTGGAAAAGAATATGCCGATCGGTTCGGGCTTAGGCTCCAGTGCCTGTTCGGTGGTCGCGGCGCTGATGGCGATGAATGAACACTGCGGCAAGCCGCTTAATGACACTCGTTTGCTGGCTTTGATGGGCGAGCTGGAAGGCCGTATCTCCGGCAGCATTCATTACGACAACGTGGCACCGTGTTTTCTCGGTGGTATGCAGTTGATGATCGAAGAAAACGACATCATCAGCCAGCAAGTGCCAGGGTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGGATTAAAGTCTCGACGGCAGAAGCCAGGGCTATTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCACGGGCGACATCTGGCAGGCTTCATTCACGCCTGCTATTCCCGTCAGCCTGAGCTTGCCGCGAAGCTGATGAAAGATGTTATCGCTGAACCCTACCGTGAACGGTTACTGCCAGGCTTCCGGCAGGCGCGGCAGGCGGTCGCGGAAATCGGCGCGGTAGCGAGCGGTATCTCCGGCTCCGGCCCGACCTTGTTCGCTCTGTGTGACAAGCCGGAAACCGCCCAGCGCGTTGCCGACTGGTTGGGTAAGAACTACCTGCAAAATCAGGAAGGTTTTGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGTACTGGAAAACTAA", + "dna_sequence_length": 933, + "functions": [ + "homoserine kinase" + ], + "id": "CDS_3", + "location": [ + [ + "NC_000913", + 2801, + "+", + 933 + ] + ], + "md5": "51e827780f3898e4dd50ccc8f7e21e0d", + "parent_gene": "", + "protein_md5": "09fc035645f9509d17d76d9dba33c265", + "protein_translation": "MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFSLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPETAQRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000012" + ], + [ + "gene_synonym", + "ECK0004" + ], + [ + "gene_synonym", + "EcoGene:EG11000" + ], + [ + "gene_synonym", + "GI:16127998" + ], + [ + "gene_synonym", + "GeneID:945198" + ], + [ + "gene_synonym", + "JW0003" + ], + [ + "gene_synonym", + "NP_414545.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00934" + ], + [ + "gene_synonym", + "b0004" + ], + [ + "gene_synonym", + "thrC" + ] + ], + "dna_sequence": "ATGAAACTCTACAATCTGAAAGATCACAACGAGCAGGTCAGCTTTGCGCAAGCCGTAACCCAGGGGTTGGGCAAAAATCAGGGGCTGTTTTTTCCGCACGACCTGCCGGAATTCAGCCTGACTGAAATTGATGAGATGCTGAAGCTGGATTTTGTCACCCGCAGTGCGAAGATCCTCTCGGCGTTTATTGGTGATGAAATCCCACAGGAAATCCTGGAAGAGCGCGTGCGCGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTGAAAGCGATGTCGGTTGTCTGGAATTGTTCCACGGGCCAACGCTGGCATTTAAAGATTTCGGCGGTCGCTTTATGGCACAAATGCTGACCCATATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGCACGACGGTCAGTGGTCACCCAAAGCGACTCAGGCGACGTTATCCAACGCGATGGACGTGAGTCAGCCGAACAACTGGCCGCGTGTGGAAGAGTTGTTCCGCCGCAAAATCTGGCAACTGAAAGAGCTGGGTTATGCAGCCGTGGATGATGAAACCACGCAACAGACAATGCGTGAGTTAAAAGAACTGGGCTACACTTCGGAGCCGCACGCTGCCGTAGCTTATCGTGCGCTGCGTGATCAGTTGAATCCAGGCGAATATGGCTTGTTCCTCGGCACCGCGCATCCGGCGAAATTTAAAGAGAGCGTGGAAGCGATTCTCGGTGAAACGTTGGATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAA", + "dna_sequence_length": 1287, + "functions": [ + "L-threonine synthase" + ], + "id": "CDS_4", + "location": [ + [ + "NC_000913", + 3734, + "+", + 1287 + ] + ], + "md5": "93b19fb7b37c0b60027e4537f83850d0", + "parent_gene": "", + "protein_md5": "3fe5ee9bcebd44132d18e2b50b8b92c3", + "protein_translation": "MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000015" + ], + [ + "gene_synonym", + "ECK0005" + ], + [ + "gene_synonym", + "EcoGene:EG14384" + ], + [ + "gene_synonym", + "GI:16127999" + ], + [ + "gene_synonym", + "GeneID:944747" + ], + [ + "gene_synonym", + "JW0004" + ], + [ + "gene_synonym", + "NP_414546.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75616" + ], + [ + "gene_synonym", + "b0005" + ], + [ + "gene_synonym", + "yaaX" + ] + ], + "dna_sequence": "GTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAA", + "dna_sequence_length": 297, + "functions": [ + "DUF2502 family putative periplasmic protein" + ], + "id": "CDS_5", + "location": [ + [ + "NC_000913", + 5234, + "+", + 297 + ] + ], + "md5": "2a6bf4c86256b6689661779d4366f0cb", + "parent_gene": "", + "protein_md5": "accd217a526db58f0dc94fad2625013a", + "protein_translation": "MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000018" + ], + [ + "gene_synonym", + "ECK0006" + ], + [ + "gene_synonym", + "EcoGene:EG10011" + ], + [ + "gene_synonym", + "GI:16128000" + ], + [ + "gene_synonym", + "GeneID:944749" + ], + [ + "gene_synonym", + "JW0005" + ], + [ + "gene_synonym", + "NP_414547.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8I3" + ], + [ + "gene_synonym", + "b0006" + ], + [ + "gene_synonym", + "yaaA" + ] + ], + "dna_sequence": "ATGCTGATTCTTATTTCACCTGCGAAAACGCTTGATTACCAAAGCCCGTTGACCACCACGCGCTATACGCTGCCGGAGCTGTTAGACAATTCCCAGCAGTTGATCCATGAGGCGCGGAAACTGACGCCTCCGCAGATTAGCACGCTGATGCGCATCAGCGACAAACTGGCGGGTATCAACGCCGCTCGCTTTCATGACTGGCAGCCAGATTTCACGCCGGCGAATGCCCGCCAGGCGATTCTGGCGTTTAAAGGTGATGTCTACACCGGCTTGCAGGCCGAAACCTTCAGCGAAGACGATTTCGATTTTGCCCAACAGCATTTGCGAATGCTTTCCGGCTTGTATGGCGTACTCCGCCCGCTCGATTTAATGCAGCCTTATCGTCTGGAAATGGGGATCCGTCTTGAGAATGCCCGAGGGAAAGATCTGTATCAATTCTGGGGAGATATCATCACCAACAAGCTGAACGAGGCGCTCGCAGCACAAGGCGATAATGTGGTGATTAATCTGGCGTCAGATGAGTATTTTAAATCGGTGAAGCCGAAGAAATTGAATGCCGAGATTATCAAGCCGGTGTTCCTCGATGAGAAGAACGGCAAATTTAAGATCATCAGCTTCTACGCTAAGAAAGCACGCGGTCTGATGAGTCGTTTCATTATTGAAAATCGGCTGACCAAACCAGAGCAACTGACTGGTTTTAATAGCGAAGGTTACTTCTTTGATGAAGATTCCTCCAGCAATGGCGAACTGGTGTTTAAACGCTACGAGCAGCGTTAA", + "dna_sequence_length": 777, + "functions": [ + "peroxide resistance protein, lowers intracellular iron" + ], + "id": "CDS_6", + "location": [ + [ + "NC_000913", + 6459, + "-", + 777 + ] + ], + "md5": "526cc558d00c8b6a111dc18ae36caa22", + "parent_gene": "", + "protein_md5": "3918eea8540ab18805c356c3e3096954", + "protein_translation": "MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000020" + ], + [ + "gene_synonym", + "ECK0007" + ], + [ + "gene_synonym", + "EcoGene:EG11555" + ], + [ + "gene_synonym", + "GI:16128001" + ], + [ + "gene_synonym", + "GeneID:944745" + ], + [ + "gene_synonym", + "JW0006" + ], + [ + "gene_synonym", + "NP_414548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30143" + ], + [ + "gene_synonym", + "b0007" + ], + [ + "gene_synonym", + "yaaJ" + ] + ], + "dna_sequence": "ATGCCAGATTTTTTCTCCTTCATTAACAGCGTCCTTTGGGGATCGGTAATGATTTACCTGCTCTTCGGCGCAGGTTGTTGGTTCACTTTTCGCACCGGATTTGTGCAGTTTCGCTACATCCGCCAGTTTGGCAAAAGTCTTAAAAATAGCATTCATCCACAGCCAGGCGGTTTAACCTCATTTCAGTCATTGTGTACCAGTCTTGCGGCGCGCGTGGGTAGCGGCAACCTGGCCGGCGTTGCGCTGGCTATTACCGCCGGTGGACCTGGAGCCGTCTTTTGGATGTGGGTTGCCGCGTTTATCGGCATGGCGACCTCGTTTGCCGAATGTTCTCTGGCACAACTTTATAAAGAACGTGACGTCAATGGGCAGTTTCGTGGCGGACCGGCATGGTATATGGCGCGCGGGCTGGGGATGCGCTGGATGGGCGTTCTGTTCGCCGTCTTTTTGCTCATCGCCTATGGCATAATTTTCAGCGGAGTTCAAGCGAACGCCGTTGCCCGCGCCCTGAGTTTTTCTTTTGATTTTCCCCCGCTGGTGACAGGCATTATTCTCGCTGTCTTTACTCTGCTGGCAATCACTCGCGGTCTTCATGGCGTCGCCCGGCTCATGCAGGGCTTTGTCCCGTTGATGGCGATAATCTGGGTACTGACCAGCCTGGTAATTTGCGTAATGAATATCGGGCAACTTCCCCACGTCATTTGGTCTATTTTTGAGAGTGCTTTTGGCTGGCAGGAAGCGGCAGGCGGCGCGGCGGGATATACCTTAAGCCAGGCGATTACTAACGGTTTTCAGCGCAGTATGTTTTCCAATGAGGCGGGAATGGGTTCGACGCCAAACGCGGCAGCGGCAGCGGCGTCCTGGCCTCCGCATCCGGCAGCGCAAGGGATTGTCCAGATGATTGGCATTTTTATCGACACCCTGGTCATCTGTACGGCAAGCGCCATGCTGATATTACTGGCGGGTAACGGCACAACCTACATGCCGCTGGAAGGTATTCAGCTTATCCAGAAGGCGATGCGGGTGCTAATGGGTTCCTGGGGTGCTGAGTTTGTTACCCTTGTGGTTATTCTGTTTGCCTTCAGCTCCATCGTTGCCAACTACATTTATGCCGAAAACAATCTCTTCTTTTTACGCCTGAACAACCCTAAAGCGATCTGGTGTTTGCGGATCTGCACCTTCGCAACGGTCATCGGCGGCACCTTGCTAAGCCTTCCGCTGATGTGGCAACTGGCAGATATCATAATGGCCTGCATGGCTATTACCAATTTGACCGCCATTTTACTGCTCTCGCCTGTGGTTCATACCATTGCCAGTGATTATCTACGCCAGCGTAAACTCGGCGTGCGCCCGGTGTTTGATCCATTGCGTTATCCGGATATCGGTCGCCAGCTTTCTCCGGACGCGTGGGATGATGTTTCGCAGGAGTAA", + "dna_sequence_length": 1431, + "functions": [ + "putative transporter" + ], + "id": "CDS_7", + "location": [ + [ + "NC_000913", + 7959, + "-", + 1431 + ] + ], + "md5": "69a2f030643e67623a2581743b215470", + "parent_gene": "", + "protein_md5": "6b0a18d75f3ad8aca1ae92a0db5af53e", + "protein_translation": "MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNGTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPDIGRQLSPDAWDDVSQE", + "protein_translation_length": 476, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000027" + ], + [ + "gene_synonym", + "ECK0008" + ], + [ + "gene_synonym", + "EcoGene:EG11556" + ], + [ + "gene_synonym", + "GI:16128002" + ], + [ + "gene_synonym", + "GeneID:944748" + ], + [ + "gene_synonym", + "JW0007" + ], + [ + "gene_synonym", + "NP_414549.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A870" + ], + [ + "gene_synonym", + "b0008" + ], + [ + "gene_synonym", + "talB" + ], + [ + "gene_synonym", + "yaaK" + ] + ], + "dna_sequence": "ATGACGGACAAATTGACCTCCCTTCGTCAGTACACCACCGTAGTGGCCGACACTGGGGACATCGCGGCAATGAAGCTGTATCAACCGCAGGATGCCACAACCAACCCTTCTCTCATTCTTAACGCAGCGCAGATTCCGGAATACCGTAAGTTGATTGATGATGCTGTCGCCTGGGCGAAACAGCAGAGCAACGATCGCGCGCAGCAGATCGTGGACGCGACCGACAAACTGGCAGTAAATATTGGTCTGGAAATCCTGAAACTGGTTCCGGGCCGTATCTCAACTGAAGTTGATGCGCGTCTTTCCTATGACACCGAAGCGTCAATTGCGAAAGCAAAACGCCTGATCAAACTCTACAACGATGCTGGTATTAGCAACGATCGTATTCTGATCAAACTGGCTTCTACCTGGCAGGGTATCCGTGCTGCAGAACAGCTGGAAAAAGAAGGCATCAACTGTAACCTGACCCTGCTGTTCTCCTTCGCTCAGGCTCGTGCTTGTGCGGAAGCGGGCGTGTTCCTGATCTCGCCGTTTGTTGGCCGTATTCTTGACTGGTACAAAGCGAATACCGATAAGAAAGAGTACGCTCCGGCAGAAGATCCGGGCGTGGTTTCTGTATCTGAAATCTACCAGTACTACAAAGAGCACGGTTATGAAACCGTGGTTATGGGCGCAAGCTTCCGTAACATCGGCGAAATTCTGGAACTGGCAGGCTGCGACCGTCTGACCATCGCACCGGCACTGCTGAAAGAGCTGGCGGAGAGCGAAGGGGCTATCGAACGTAAACTGTCTTACACCGGCGAAGTGAAAGCGCGTCCGGCGCGTATCACTGAGTCCGAGTTCCTGTGGCAGCACAACCAGGATCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATCTGCTGTAA", + "dna_sequence_length": 954, + "functions": [ + "transaldolase B" + ], + "id": "CDS_8", + "location": [ + [ + "NC_000913", + 8238, + "+", + 954 + ] + ], + "md5": "abd597c891b73e1f68899f477df7fd4c", + "parent_gene": "", + "protein_md5": "8bc41f8b7a091d5894e5f48e87ab5611", + "protein_translation": "MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000030" + ], + [ + "gene_synonym", + "ECK0009" + ], + [ + "gene_synonym", + "EcoGene:EG11511" + ], + [ + "gene_synonym", + "GI:16128003" + ], + [ + "gene_synonym", + "GeneID:944760" + ], + [ + "gene_synonym", + "JW0008" + ], + [ + "gene_synonym", + "NP_414550.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF03" + ], + [ + "gene_synonym", + "b0009" + ], + [ + "gene_synonym", + "bisD" + ], + [ + "gene_synonym", + "chlG" + ], + [ + "gene_synonym", + "mog" + ], + [ + "gene_synonym", + "mogA" + ], + [ + "gene_synonym", + "yaaG" + ] + ], + "dna_sequence": "ATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGCGGAACTGGCCCGGCGCGTCGTGACGTAACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACAGATGCGCCAGATCAGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTGGGCGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGAGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAA", + "dna_sequence_length": 588, + "functions": [ + "molybdochelatase incorporating molybdenum into molybdopterin" + ], + "id": "CDS_9", + "location": [ + [ + "NC_000913", + 9306, + "+", + 588 + ] + ], + "md5": "0a32665ee7a8d0032397827c549f3452", + "parent_gene": "", + "protein_md5": "3d21682c3229e2736a6f4ff872d59326", + "protein_translation": "MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFASVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000032" + ], + [ + "gene_synonym", + "ECK0010" + ], + [ + "gene_synonym", + "EcoGene:EG11512" + ], + [ + "gene_synonym", + "GI:16128004" + ], + [ + "gene_synonym", + "GeneID:944792" + ], + [ + "gene_synonym", + "JW0009" + ], + [ + "gene_synonym", + "NP_414551.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC98" + ], + [ + "gene_synonym", + "b0010" + ], + [ + "gene_synonym", + "satP" + ], + [ + "gene_synonym", + "yaaH" + ] + ], + "dna_sequence": "ATGGGCAACACTAAGTTGGCTAATCCGGCACCGCTGGGCCTGATGGGCTTCGGCATGACCACCATTCTGCTTAACCTGCACAACGTGGGTTATTTCGCTCTGGACGGTATTATTCTTGCCATGGGCATTTTCTACGGCGGCATCGCGCAAATTTTTGCTGGTCTGCTGGAGTACAAAAAAGGCAACACTTTCGGTTTAACCGCATTCACCTCTTACGGTTCTTTCTGGCTGACGCTGGTTGCGATTCTGCTGATGCCGAAACTGGGTCTGACCGATGCGCCAAATGCACAGTTCCTTGGTGTCTACCTGGGTCTGTGGGGCGTATTTACGCTGTTTATGTTCTTCGGCACGCTGAAAGGCGCACGCGTTCTGCAATTCGTTTTCTTTAGCCTGACCGTGCTGTTTGCCCTGCTGGCGATCGGTAACATTGCCGGTAACGCCGCAATCATCCACTTTGCCGGCTGGATTGGGCTGATCTGCGGTGCCAGCGCAATCTATCTGGCGATGGGTGAAGTACTGAACGAGCAGTTTGGTCGCACCGTTCTGCCGATTGGTGAATCCCACTAA", + "dna_sequence_length": 567, + "functions": [ + "succinate-acetate transporter" + ], + "id": "CDS_10", + "location": [ + [ + "NC_000913", + 10494, + "-", + 567 + ] + ], + "md5": "b750a95e4f19611bb8c4f7f86901572d", + "parent_gene": "", + "protein_md5": "f8cecc10df7ed11bb9a851ffecbbd625", + "protein_translation": "MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000037" + ], + [ + "gene_synonym", + "ECK0011" + ], + [ + "gene_synonym", + "EcoGene:EG14340" + ], + [ + "gene_synonym", + "GI:16128005" + ], + [ + "gene_synonym", + "GeneID:944771" + ], + [ + "gene_synonym", + "JW0010" + ], + [ + "gene_synonym", + "NP_414552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75617" + ], + [ + "gene_synonym", + "b0011" + ], + [ + "gene_synonym", + "yaaW" + ] + ], + "dna_sequence": "ATGAATGTTAATTACCTGAATGATTCAGATCTGGATTTTCTTCAGCATTGTAGTGAGGAACAGTTGGCAAATTTCGCCCGATTGCTCACCCATAATGAAAAAGGCAAAACTCGCCTCTCCAGCGTACTGATGCGCAACGAACTGTTTAAATCGATGGAAGGGCATCCCGAGCAACATCGCCGCAACTGGCAGCTGATTGCCGGAGAATTACAGCATTTTGGTGGCGATAGTATCGCCAACAAACTGCGCGGACACGGTAAATTGTATCGGGCCATTTTGCTCGATGTTTCAAAGCGATTGAAGCTGAAAGCCGACAAAGAGATGTCTACGTTTGAAATTGAGCAACAGTTACTGGAACAATTTCTGCGTAATACCTGGAAGAAAATGGACGAGGAACATAAGCAGGAGTTTCTGCACGCGGTCGATGCCAGGGTGAATGAGCTGGAAGAGCTGCTGCCGCTGCTGATGAAAGACAAATTATTGGCAAAAGGTGTGTCGCATTTGCTTTCCAGCCAACTGACCCGCATTTTACGCACCCACGCAGCAATGAGCGTACTTGGGCATGGTTTGCTGCGCGGCGCGGGGCTGGGAGGCCCTGTAGGTGCGGCACTAAATGGGGTTAAAGCGGTCAGCGGCAGCGCCTATCGCGTGACGATTCCAGCCGTACTGCAAATCGCCTGCCTGCGCCGGATGGTTAGCGCCACTCAGGTCTGA", + "dna_sequence_length": 714, + "functions": [ + "UPF0174 family protein" + ], + "id": "CDS_11", + "location": [ + [ + "NC_000913", + 11356, + "-", + 714 + ] + ], + "md5": "f1994d506b5d8835a3749de790dbf2de", + "parent_gene": "", + "protein_md5": "6cb49aa3c311912db142bd13461f7cd2", + "protein_translation": "MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKLKADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKLLAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVTIPAVLQIACLRRMVSATQV", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000043" + ], + [ + "gene_synonym", + "ECK0013" + ], + [ + "gene_synonym", + "EcoGene:EG11513" + ], + [ + "gene_synonym", + "GI:16128007" + ], + [ + "gene_synonym", + "GeneID:944751" + ], + [ + "gene_synonym", + "JW0012" + ], + [ + "gene_synonym", + "NP_414554.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28696" + ], + [ + "gene_synonym", + "b0013" + ], + [ + "gene_synonym", + "yaaI" + ] + ], + "dna_sequence": "ATGAAATCCGTTTTTACGATTTCCGCCAGCCTGGCGATTAGCCTGATGCTGTGCTGCACGGCGCAGGCAAACGACCATAAACTCCTCGGCGCCATTGCAATGCCGCGTAACGAAACCAACGATCTGGCGCTGAAACTTCCTGTTTGTCGCATTGTGAAACGCATACAACTCTCTGCCGACCATGGCGATTTACAGTTAAGCGGTGCATCGGTTTATTTCAAAGCCGCCCGTAGCGCCAGTCAGAGCCTGAATATTCCTTCAGAAATAAAAGAAGGGCAAACCACTGACTGGATCAACATTAACAGCGATAACGACAATAAACGCTGCGTCTCAAAAATCACCTTTTCGGGTCATACGGTGAACTCATCGGATATGGCCACGCTGAAAATTATCGGCGACGACTAA", + "dna_sequence_length": 405, + "functions": [ + "UPF0412 family protein" + ], + "id": "CDS_12", + "location": [ + [ + "NC_000913", + 11786, + "-", + 405 + ] + ], + "md5": "021e705c61a3b5e3580325ff245ceb65", + "parent_gene": "", + "protein_md5": "d612bbf7ee4e74b80a7a6e2d0db5c40e", + "protein_translation": "MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDD", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000052" + ], + [ + "gene_synonym", + "ECK0014" + ], + [ + "gene_synonym", + "EcoGene:EG10241" + ], + [ + "gene_synonym", + "GI:16128008" + ], + [ + "gene_synonym", + "GeneID:944750" + ], + [ + "gene_synonym", + "JW0013" + ], + [ + "gene_synonym", + "NP_414555.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Y8" + ], + [ + "gene_synonym", + "b0014" + ], + [ + "gene_synonym", + "dnaK" + ], + [ + "gene_synonym", + "groPAB" + ], + [ + "gene_synonym", + "groPC" + ], + [ + "gene_synonym", + "groPF" + ], + [ + "gene_synonym", + "grpC" + ], + [ + "gene_synonym", + "grpF" + ], + [ + "gene_synonym", + "seg" + ] + ], + "dna_sequence": "ATGGGTAAAATAATTGGTATCGACCTGGGTACTACCAACTCTTGTGTAGCGATTATGGATGGCACCACTCCTCGCGTGCTGGAGAACGCCGAAGGCGATCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCGATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATGCCGTTCAAAATTATTGCTGCTGATAACGGCGACGCATGGGTCGAAGTTAAAGGCCAGAAAATGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGACAAAGGCACTGGCAACCGTACTATCGCGGTTTATGACCTGGGTGGTGGTACTTTCGATATTTCTATTATCGAAATCGACGAAGTTGACGGCGAAAAAACCTTCGAAGTTCTGGCAACCAACGGTGATACCCACCTGGGGGGTGAAGACTTCGACAGCCGTCTGATCAACTATCTGGTTGAAGAATTCAAGAAAGATCAGGGCATTGACCTGCGCAACGATCCGCTGGCAATGCAGCGCCTGAAAGAAGCGGCAGAAAAAGCGAAAATCGAACTGTCTTCCGCTCAGCAGACCGACGTTAACCTGCCATACATCACTGCAGACGCGACCGGTCCGAAACACATGAACATCAAAGTGACTCGTGCGAAACTGGAAAGCCTGGTTGAAGATCTGGTAAACCGTTCCATTGAGCCGCTGAAAGTTGCACTGCAGGACGCTGGCCTGTCCGTATCTGATATCGACGACGTTATCCTCGTTGGTGGTCAGACTCGTATGCCAATGGTTCAGAAGAAAGTTGCTGAGTTCTTTGGTAAAGAGCCGCGTAAAGACGTTAACCCGGACGAAGCTGTAGCAATCGGTGCTGCTGTTCAGGGTGGTGTTCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAACGTGCGGCTGATAACAAATCTCTGGGTCAGTTCAACCTAGATGGTATCAACCCGGCACCGCGCGGCATGCCGCAGATCGAAGTTACCTTCGATATCGATGCTGACGGTATCCTGCACGTTTCCGCGAAAGATAAAAACAGCGGTAAAGAGCAGAAGATCACCATCAAGGCTTCTTCTGGTCTGAACGAAGATGAAATCCAGAAAATGGTACGCGACGCAGAAGCTAACGCCGAAGCTGACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTGCAAACAACGCGAAAGATGACGATGTTGTCGACGCTGAATTTGAAGAAGTCAAAGACAAAAAATAA", + "dna_sequence_length": 1917, + "functions": [ + "chaperone Hsp70, with co-chaperone DnaJ" + ], + "id": "CDS_13", + "location": [ + [ + "NC_000913", + 12163, + "+", + 1917 + ] + ], + "md5": "fe07f741d6a22cd2322332dfb45fe97a", + "parent_gene": "", + "protein_md5": "0d39280bf6256e4ebfb5b40449c56b29", + "protein_translation": "MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK", + "protein_translation_length": 638, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000054" + ], + [ + "gene_synonym", + "ECK0015" + ], + [ + "gene_synonym", + "EcoGene:EG10240" + ], + [ + "gene_synonym", + "GI:16128009" + ], + [ + "gene_synonym", + "GeneID:944753" + ], + [ + "gene_synonym", + "JW0014" + ], + [ + "gene_synonym", + "NP_414556.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08622" + ], + [ + "gene_synonym", + "b0015" + ], + [ + "gene_synonym", + "dnaJ" + ], + [ + "gene_synonym", + "faa" + ], + [ + "gene_synonym", + "groP" + ], + [ + "gene_synonym", + "grpC" + ] + ], + "dna_sequence": "ATGGCTAAGCAAGATTATTACGAGATTTTAGGCGTTTCCAAAACAGCGGAAGAGCGTGAAATCAGAAAGGCCTACAAACGCCTGGCCATGAAATACCACCCGGACCGTAACCAGGGTGACAAAGAGGCCGAGGCGAAATTTAAAGAGATCAAGGAAGCTTATGAAGTTCTGACCGACTCGCAAAAACGTGCGGCATACGATCAGTATGGTCATGCTGCGTTTGAGCAAGGTGGCATGGGCGGCGGCGGTTTTGGCGGCGGCGCAGACTTCAGCGATATTTTTGGTGACGTTTTCGGCGATATTTTTGGCGGCGGACGTGGTCGTCAACGTGCGGCGCGCGGTGCTGATTTACGCTATAACATGGAGCTCACCCTCGAAGAAGCTGTACGTGGCGTGACCAAAGAGATCCGCATTCCGACTCTGGAAGAGTGTGACGTTTGCCACGGTAGCGGTGCAAAACCAGGTACACAGCCGCAGACTTGTCCGACCTGTCATGGTTCTGGTCAGGTGCAGATGCGCCAGGGATTCTTCGCTGTACAGCAGACCTGTCCACACTGTCAGGGCCGCGGTACGCTGATCAAAGATCCGTGCAACAAATGTCATGGTCATGGTCGTGTTGAGCGCAGCAAAACGCTGTCCGTTAAAATCCCGGCAGGGGTGGACACTGGAGACCGCATCCGTCTTGCGGGCGAAGGTGAAGCGGGCGAGCATGGCGCACCGGCAGGCGATCTGTACGTTCAGGTTCAGGTTAAACAGCACCCGATTTTCGAGCGTGAAGGCAACAACCTGTATTGCGAAGTCCCGATCAACTTCGCTATGGCGGCGCTGGGTGGCGAAATCGAAGTACCGACCCTTGATGGTCGCGTCAAACTGAAAGTGCCTGGCGAAACCCAGACCGGTAAGCTATTCCGTATGCGCGGTAAAGGCGTCAAGTCTGTCCGCGGTGGCGCACAGGGTGATTTGCTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAAAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAA", + "dna_sequence_length": 1131, + "functions": [ + "chaperone Hsp40, DnaK co-chaperone" + ], + "id": "CDS_14", + "location": [ + [ + "NC_000913", + 14168, + "+", + 1131 + ] + ], + "md5": "55196655c404d4a0166d91689297bf38", + "parent_gene": "", + "protein_md5": "f5147ac0d118b474783edf1f4d673e67", + "protein_translation": "MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR", + "protein_translation_length": 376, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000058" + ], + [ + "gene_synonym", + "ECK0016" + ], + [ + "gene_synonym", + "EcoGene:EG40012" + ], + [ + "gene_synonym", + "GI:16128010" + ], + [ + "gene_synonym", + "GeneID:944754" + ], + [ + "gene_synonym", + "NP_414557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF91" + ], + [ + "gene_synonym", + "b0016" + ], + [ + "gene_synonym", + "insL1" + ] + ], + "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", + "dna_sequence_length": 1113, + "functions": [ + "IS186 transposase" + ], + "id": "CDS_15", + "location": [ + [ + "NC_000913", + 15445, + "+", + 1113 + ] + ], + "md5": "3fce9c70c9584709b648ad88256d7bb8", + "parent_gene": "", + "protein_md5": "4dc27d1a21f12988eb2f603aa2b9828d", + "protein_translation": "MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000064" + ], + [ + "gene_synonym", + "ECK4466" + ], + [ + "gene_synonym", + "EcoGene:EG12074" + ], + [ + "gene_synonym", + "GI:16128012" + ], + [ + "gene_synonym", + "GeneID:944756" + ], + [ + "gene_synonym", + "NP_414559.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33236" + ], + [ + "gene_synonym", + "b0018" + ], + [ + "gene_synonym", + "gefL" + ], + [ + "gene_synonym", + "mokC" + ] + ], + "dna_sequence": "ATGCTGAACACATGTAGAGTGCCTCTTACTGACCGTAAGGTCAAGGAGAAGAGAGCAATGAAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAAAGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA", + "dna_sequence_length": 210, + "functions": [ + "regulatory protein for HokC, overlaps CDS of hokC" + ], + "id": "CDS_16", + "location": [ + [ + "NC_000913", + 16960, + "-", + 210 + ] + ], + "md5": "b69e96bad5ffd7084a930c02d5197a5d", + "parent_gene": "", + "protein_md5": "654ba6a95360f88a6a7db06a208f9c6a", + "protein_translation": "MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047278" + ], + [ + "gene_synonym", + "ECK0018" + ], + [ + "gene_synonym", + "EcoGene:EG10373" + ], + [ + "gene_synonym", + "GI:49175991" + ], + [ + "gene_synonym", + "GeneID:2847744" + ], + [ + "gene_synonym", + "JW5879" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACG4" + ], + [ + "gene_synonym", + "YP_025292.1" + ], + [ + "gene_synonym", + "b4412" + ], + [ + "gene_synonym", + "gef" + ], + [ + "gene_synonym", + "hokC" + ] + ], + "dna_sequence": "ATGAAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAAAGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA", + "dna_sequence_length": 153, + "functions": [ + "toxic membrane protein, small" + ], + "id": "CDS_17", + "location": [ + [ + "NC_000913", + 16903, + "-", + 153 + ] + ], + "md5": "989fc5ff4d3c41ea58f3406b6e431954", + "parent_gene": "", + "protein_md5": "c927f27b99759a392fc3d10a68011412", + "protein_translation": "MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE", + "protein_translation_length": 50, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000068" + ], + [ + "gene_synonym", + "ECK0020" + ], + [ + "gene_synonym", + "EcoGene:EG10652" + ], + [ + "gene_synonym", + "GI:16128013" + ], + [ + "gene_synonym", + "GeneID:944758" + ], + [ + "gene_synonym", + "JW0018" + ], + [ + "gene_synonym", + "NP_414560.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13738" + ], + [ + "gene_synonym", + "ant" + ], + [ + "gene_synonym", + "antA" + ], + [ + "gene_synonym", + "b0019" + ], + [ + "gene_synonym", + "nhaA" + ] + ], + "dna_sequence": "GTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGACGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTGTTAGTCGGTCTGGAAGTTAAACGTGAACTGATGCAAGGATCGCTAGCCAGCTTACGCCAGGCCGCATTTCCAGTTATCGCCGCTATTGGTGGGATGATTGTGCCGGCATTACTCTATCTGGCTTTTAACTATGCCGATCCGATTACCCGCGAAGGGTGGGCGATCCCGGCGGCTACTGACATTGCTTTTGCACTTGGTGTACTGGCGCTGTTGGGAAGTCGTGTTCCGTTAGCGCTGAAGATCTTTTTGATGGCTCTGGCTATTATCGACGATCTTGGGGCCATCATTATCATCGCATTGTTCTACACTAATGACTTATCGATGGCCTCTCTTGGCGTCGCGGCTGTAGCAATTGCGGTACTCGCGGTATTGAATCTGTGTGGTGCACGCCGCACGGGCGTCTATATTCTTGTTGGCGTGGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACTCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTGCACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGCGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGTGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGTAGATCCAGAACTGATTAACTGGGCGAAACTCGGTATCCTGGTCGGTTCTATCTCTTCGGCGGTAATTGGATACAGCTGGTTACGCGTTCGTTTGCGTCCATCAGTTTGA", + "dna_sequence_length": 1167, + "functions": [ + "sodium-proton antiporter" + ], + "id": "CDS_18", + "location": [ + [ + "NC_000913", + 17489, + "+", + 1167 + ] + ], + "md5": "b6f132d099493f27cb171a9bec71601f", + "parent_gene": "", + "protein_md5": "6cee586615be3037084294bb04755791", + "protein_translation": "MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000072" + ], + [ + "gene_synonym", + "ECK0021" + ], + [ + "gene_synonym", + "EcoGene:EG11078" + ], + [ + "gene_synonym", + "GI:16128014" + ], + [ + "gene_synonym", + "GeneID:944757" + ], + [ + "gene_synonym", + "JW0019" + ], + [ + "gene_synonym", + "NP_414561.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G2" + ], + [ + "gene_synonym", + "antO" + ], + [ + "gene_synonym", + "b0020" + ], + [ + "gene_synonym", + "nhaR" + ], + [ + "gene_synonym", + "yaaB" + ] + ], + "dna_sequence": "ATGAGCATGTCTCATATCAATTACAACCACTTGTATTACTTCTGGCATGTCTATAAAGAAGGTTCCGTGGTTGGCGCAGCGGAGGCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGACGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGATATTGTGAACTATCGCAAAGAATCCAATTTATTGTTTGACGTTGGCGTGGCTGATGCACTTTCCAAACGCCTGGTCAGTAGCGTACTTAACGCCGCAGTGGTAGAAGGCGAGCCCATTCATCTTCGCTGCTTCGAATCCACCCACGAAATGCTGCTGGAGCAATTAAGTCAGCATAAACTGGATATGATCATTTCTGACTGTCCGATAGACTCTACGCAGCAGGAAGGCCTGTTCTCCGTGAGAATTGGCGAATGTGGCGTGAGTTTCTGGTGTACAAATCCACCACCAGAAAAACCGTTCCCGGCTTGTCTGGAAGAACGGCGACTTTTGATTCCTGGGCGACGTTCAATGTTAGGGCGCAAATTGCTTAACTGGTTTAACTCCCAGGGATTAAACGTAGAAATCCTCGGCGAGTTTGATGATGCCGCTTTGATGAAAGCTTTTGGTGCGATGCACAATGCAATCTTCGTTGCCCCAACGCTTTATGCATATGACTTTTATGCCGATAAAACTGTCGTAGAAATTGGTCGCGTCGAGAATGTGATGGAAGAGTACCATGCTATTTTTGCTGAGCGGATGATTCAGCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCTTTTTAGTCCAGCGGTGCGTTAA", + "dna_sequence_length": 906, + "functions": [ + "transcriptional activator of nhaA" + ], + "id": "CDS_19", + "location": [ + [ + "NC_000913", + 18715, + "+", + 906 + ] + ], + "md5": "fc6ad3c8ececb0c1d27e056db5544c75", + "parent_gene": "", + "protein_md5": "18b81b41aef5f364b6d48565df28ad24", + "protein_translation": "MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAVR", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000075" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16128015" + ], + [ + "gene_synonym", + "GeneID:944743" + ], + [ + "gene_synonym", + "NP_414562.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF25" + ], + [ + "gene_synonym", + "b0021" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_20", + "location": [ + [ + "NC_000913", + 20314, + "-", + 504 + ] + ], + "md5": "9b3b0a523236fbbb94e9a150e2349e7c", + "parent_gene": "", + "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", + "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000078" + ], + [ + "gene_synonym", + "ECK0023" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16128016" + ], + [ + "gene_synonym", + "GeneID:948449" + ], + [ + "gene_synonym", + "NP_414563.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF07" + ], + [ + "gene_synonym", + "b0022" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_21", + "location": [ + [ + "NC_000913", + 20508, + "-", + 276 + ] + ], + "md5": "db0d756792984c1e534a2dad9bfdde5f", + "parent_gene": "", + "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000082" + ], + [ + "gene_synonym", + "ECK0024" + ], + [ + "gene_synonym", + "EcoGene:EG10919" + ], + [ + "gene_synonym", + "GI:16128017" + ], + [ + "gene_synonym", + "GeneID:944759" + ], + [ + "gene_synonym", + "JW0022" + ], + [ + "gene_synonym", + "NP_414564.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7U7" + ], + [ + "gene_synonym", + "b0023" + ], + [ + "gene_synonym", + "rpsT" + ], + [ + "gene_synonym", + "sup" + ] + ], + "dna_sequence": "TTGGCTAATATCAAATCAGCTAAGAAGCGCGCCATTCAGTCTGAAAAGGCTCGTAAGCACAACGCAAGCCGTCGCTCTATGATGCGTACTTTCATCAAGAAAGTATACGCAGCTATCGAAGCTGGCGACAAAGCTGCTGCACAGAAAGCATTTAACGAAATGCAACCGATCGTGGACCGTCAGGCTGCTAAAGGTCTGATCCACAAAAACAAAGCTGCACGTCATAAGGCTAACCTGACTGCACAGATCAACAAACTGGCTTAA", + "dna_sequence_length": 264, + "functions": [ + "30S ribosomal subunit protein S20" + ], + "id": "CDS_22", + "location": [ + [ + "NC_000913", + 21078, + "-", + 264 + ] + ], + "md5": "f3bd020b1136707f763f1ae20842b1d8", + "parent_gene": "", + "protein_md5": "aa8c8bdeafb5001d2c2f4e8ac5114d55", + "protein_translation": "MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000089" + ], + [ + "gene_synonym", + "ECK0025" + ], + [ + "gene_synonym", + "EcoGene:EG14386" + ], + [ + "gene_synonym", + "GI:16128018" + ], + [ + "gene_synonym", + "GeneID:949128" + ], + [ + "gene_synonym", + "JW5003" + ], + [ + "gene_synonym", + "NP_414565.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75620" + ], + [ + "gene_synonym", + "b0024" + ], + [ + "gene_synonym", + "yaaY" + ] + ], + "dna_sequence": "ATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCTTGACCGCTGTACAAGGTATACTCGGACGATTTTCACTGTTTTGA", + "dna_sequence_length": 219, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_23", + "location": [ + [ + "NC_000913", + 21181, + "+", + 219 + ] + ], + "md5": "632d9c89eeed63443296c35601b7374a", + "parent_gene": "", + "protein_md5": "ba6191e60d52aa485969dd92928859eb", + "protein_translation": "MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMKSHFFLISVLNRRLTLTAVQGILGRFSLF", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000091" + ], + [ + "gene_synonym", + "ECK0026" + ], + [ + "gene_synonym", + "EcoGene:EG11079" + ], + [ + "gene_synonym", + "GI:16128019" + ], + [ + "gene_synonym", + "GeneID:949129" + ], + [ + "gene_synonym", + "JW0023" + ], + [ + "gene_synonym", + "NP_414566.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG40" + ], + [ + "gene_synonym", + "b0025" + ], + [ + "gene_synonym", + "ribF" + ], + [ + "gene_synonym", + "yaaC" + ] + ], + "dna_sequence": "ATGAAGCTGATACGCGGCATACATAATCTCAGCCAGGCCCCGCAAGAAGGGTGTGTGCTGACTATTGGTAATTTCGACGGCGTGCATCGCGGTCATCGCGCGCTGTTACAGGGCTTGCAGGAAGAAGGGCGCAAGCGCAACTTACCGGTGATGGTGATGCTTTTTGAACCTCAACCACTGGAACTGTTTGCTACCGATAAAGCCCCGGCAAGACTGACCCGGCTGCGGGAAAAACTGCGTTACCTTGCAGAGTGTGGCGTTGATTACGTGCTGTGCGTGCGTTTCGACAGGCGTTTCGCGGCGTTAACCGCGCAAAATTTCATCAGCGATCTTCTGGTGAAGCATTTGCGCGTAAAATTTCTTGCCGTAGGTGATGATTTCCGCTTTGGCGCTGGTCGTGAAGGCGATTTCTTGTTATTACAGAAAGCTGGCATGGAATACGGCTTCGATATCACCAGTACGCAAACTTTTTGCGAAGGTGGCGTGCGCATCAGCAGCACCGCCGTGCGTCAGGCCCTTGCGGATGACAATCTGGCTCTGGCAGAGAGTTTACTGGGGCACCCGTTTGCCATCTCCGGGCGTGTAGTCCACGGTGATGAATTAGGGCGCACTATAGGTTTCCCGACGGCGAATGTACCGCTGCGCCGTCAGGTTTCCCCGGTGAAAGGGGTTTATGCGGTAGAAGTGCTGGGCCTCGGTGAAAAGCCGTTACCCGGCGTGGCAAACATCGGAACACGCCCAACGGTTGCCGGTATTCGCCAGCAGCTGGAAGTGCATTTGTTAGATGTTGCAATGGACCTTTACGGTCGCCATATACAAGTAGTGCTGCGTAAAAAAATACGCAATGAGCAGCGATTTGCGTCGCTGGACGAACTGAAAGCGCAGATTGCGCGTGATGAATTAACCGCCCGCGAATTTTTTGGGCTAACAAAACCGGCTTAA", + "dna_sequence_length": 942, + "functions": [ + "bifunctional riboflavin kinase/FAD synthetase" + ], + "id": "CDS_24", + "location": [ + [ + "NC_000913", + 21407, + "+", + 942 + ] + ], + "md5": "ade7634f5413fa6471ff64467a3b820e", + "parent_gene": "", + "protein_md5": "25ec4f764e87614d7859601d579758d8", + "protein_translation": "MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000094" + ], + [ + "gene_synonym", + "ECK0027" + ], + [ + "gene_synonym", + "EcoGene:EG10492" + ], + [ + "gene_synonym", + "GI:16128020" + ], + [ + "gene_synonym", + "GeneID:944761" + ], + [ + "gene_synonym", + "JW0024" + ], + [ + "gene_synonym", + "NP_414567.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00956" + ], + [ + "gene_synonym", + "b0026" + ], + [ + "gene_synonym", + "ileS" + ], + [ + "gene_synonym", + "ilvS" + ] + ], + "dna_sequence": "ATGAGTGACTATAAATCAACCCTGAATTTGCCGGAAACAGGGTTCCCGATGCGTGGCGATCTCGCCAAGCGCGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAAGACATTATCGTGAAGTCCAAAGGGCTTTCCGGTTATGACTCGCCGTATGTGCCTGGCTGGGACTGCCACGGTCTGCCGATCGAGCTGAAAGTCGAGCAAGAATACGGTAAGCCGGGTGAGAAATTCACCGCCGCCGAGTTCCGCGCCAAGTGCCGCGAATACGCGGCGACCCAGGTTGACGGTCAACGCAAAGACTTTATCCGTCTGGGCGTGCTGGGCGACTGGTCGCACCCGTACCTGACCATGGACTTCAAAACTGAAGCCAACATCATCCGCGCGCTGGGCAAAATCATCGGCAACGGTCACCTGCACAAAGGCGCGAAGCCAGTTCACTGGTGCGTTGACTGCCGTTCTGCGCTGGCGGAAGCGGAAGTTGAGTATTACGACAAAACTTCTCCGTCCATCGACGTTGCTTTCCAGGCAGTCGATCAGGATGCACTGAAAGCAAAATTTGCCGTAAGCAACGTTAACGGCCCAATCTCGCTGGTAATCTGGACCACCACGCCGTGGACTCTGCCTGCCAACCGCGCAATCTCTATTGCACCAGATTTCGACTATGCGCTGGTGCAGATCGACGGTCAGGCCGTGATTCTGGCGAAAGATCTGGTTGAAAGCGTAATGCAGCGTATCGGCGTGACCGATTACACCATTCTCGGCACGGTAAAAGGTGCGGAGCTTGAGCTGCTGCGCTTTACCCATCCGTTTATGGGCTTCGACGTTCCGGCAATCCTCGGCGATCACGTTACCCTGGATGCCGGTACCGGTGCCGTTCACACCGCGCCTGGCCACGGCCCGGACGACTATGTGATCGGTCAGAAATACGGCCTGGAAACCGCTAACCCGGTTGGCCCGGACGGCACTTATCTGCCGGGCACTTATCCGACGCTGGATGGCGTGAACGTCTTCAAAGCGAACGACATCGTCGTTGCGCTGCTGCAGGAAAAAGGCGCGCTGCTGCACGTTGAGAAAATGCAGCACAGCTATCCGTGCTGCTGGCGTCACAAAACGCCGATCATCTTCCGCGCGACGCCGCAGTGGTTCGTCAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAAGGGTAAAGCGCCGTATCGTCAGGTACTGACCCACGGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGAGATCCTGAAACGTGCTGCCGATAGCTATCGTCGTATCCGTAACACCGCGCGCTTCCTGCTGGCAAACCTGAACGGTTTTGATCCAGCAAAAGATATGGTGAAACCGGAAGAGATGGTGGTACTGGATCGCTGGGCCGTAGGTTGTGCGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTACAGCGTCTGATGCGCTTCTGCTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCTGATGAAGTGTGGGGCTACCTGCCGGGCGAACGTGAAAAATACGTCTTCACCGGTGAGTGGTACGAAGGCCTGTTTGGCCTGGCAGACAGTGAAGCGATGAACGATGCGTTCTGGGACGAGCTGTTGAAAGTGCGTGGCGAAGTGAACAAAGTCATTGAGCAAGCGCGTGCCGACAAGAAAGTGGGTGGCTCGCTGGAAGCGGCAGTAACCTTGTATGCAGAACCGGAACTGTCGGCGAAACTGACCGCGCTGGGCGATGAATTACGATTTGTCCTGTTGACCTCCGGCGCTACCGTTGCAGACTATAACGACGCACCTGCTGATGCTCAGCAGAGCGAAGTACTCAAAGGGCTGAAAGTCGCGTTGAGTAAAGCCGAAGGTGAGAAGTGCCCACGCTGCTGGCACTACACCCAGGATGTCGGCAAGGTGGCGGAACACGCAGAAATCTGCGGCCGCTGTGTCAGCAACGTCGCCGGTGACGGTGAAAAACGTAAGTTTGCCTGA", + "dna_sequence_length": 2817, + "functions": [ + "isoleucyl-tRNA synthetase" + ], + "id": "CDS_25", + "location": [ + [ + "NC_000913", + 22391, + "+", + 2817 + ] + ], + "md5": "767162ec932d4c76f0d0b1636786b447", + "parent_gene": "", + "protein_md5": "4f44ee315bb36865c75246f599e9eeed", + "protein_translation": "MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA", + "protein_translation_length": 938, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000096" + ], + [ + "gene_synonym", + "ECK0028" + ], + [ + "gene_synonym", + "EcoGene:EG10548" + ], + [ + "gene_synonym", + "GI:16128021" + ], + [ + "gene_synonym", + "GeneID:944800" + ], + [ + "gene_synonym", + "JW0025" + ], + [ + "gene_synonym", + "NP_414568.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00804" + ], + [ + "gene_synonym", + "b0027" + ], + [ + "gene_synonym", + "lspA" + ] + ], + "dna_sequence": "ATGAGTCAATCGATCTGTTCAACAGGGCTACGCTGGCTGTGGCTGGTGGTAGTCGTGCTGATTATCGATCTGGGCAGCAAATACCTGATCCTCCAGAACTTTGCTCTGGGGGATACGGTCCCGCTGTTCCCGTCGCTTAATCTGCATTATGCGCGTAACTATGGCGCGGCGTTTAGTTTCCTTGCCGATAGCGGCGGCTGGCAGCGTTGGTTCTTTGCCGGTATTGCGATTGGTATTAGCGTGATCCTGGCAGTGATGATGTATCGCTCGAAGGCCACGCAGAAGCTAAACAATATCGCTTACGCGCTGATTATTGGCGGCGCGCTGGGCAACCTGTTCGACCGCCTGTGGCACGGCTTCGTTGTCGATATGATCGACTTCTACGTCGGCGACTGGCACTTCGCCACCTTCAACCTTGCCGATACTGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAA", + "dna_sequence_length": 495, + "functions": [ + "prolipoprotein signal peptidase (signal peptidase II)" + ], + "id": "CDS_26", + "location": [ + [ + "NC_000913", + 25207, + "+", + 495 + ] + ], + "md5": "a8975a89b82b47843d303c073ff6793e", + "parent_gene": "", + "protein_md5": "9683e1fc5f9a6deec15cbbd89526f929", + "protein_translation": "MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000101" + ], + [ + "gene_synonym", + "ECK0029" + ], + [ + "gene_synonym", + "EcoGene:EG11080" + ], + [ + "gene_synonym", + "GI:16128022" + ], + [ + "gene_synonym", + "GeneID:944807" + ], + [ + "gene_synonym", + "JW0026" + ], + [ + "gene_synonym", + "NP_414569.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM0" + ], + [ + "gene_synonym", + "b0028" + ], + [ + "gene_synonym", + "fkpB" + ], + [ + "gene_synonym", + "slpA" + ], + [ + "gene_synonym", + "yaaD" + ] + ], + "dna_sequence": "ATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTAAACCGGCGCTGTTCCGCCTGGGTGATGCTTCTCTTTCTGAAGGGCTGGAGCAACACCTGTTGGGGCTGAAAGTGGGCGATAAAACCACCTTCTCGTTGGAGCCAGATGCGGCGTTTGGCGTGCCGTCACCGGACCTGATTCAGTACTTCTCCCGCCGTGAATTTATGGATGCAGGCGAGCCAGAAATTGGCGCAATCATGCTTTTTACCGCAATGGATGGCAGTGAGATGCCTGGCGTGATCCGCGAAATTAACGGCGACTCCATTACCGTTGATTTCAACCATCCGCTGGCCGGGCAGACCGTTCATTTTGATATTGAAGTGCTGGAAATCGATCCGGCACTGGAGGCGTAA", + "dna_sequence_length": 450, + "functions": [ + "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" + ], + "id": "CDS_27", + "location": [ + [ + "NC_000913", + 25826, + "+", + 450 + ] + ], + "md5": "b7c6b0ce7ceeaeb928da871ebf1e51bd", + "parent_gene": "", + "protein_md5": "9b645bb4da5c24a326dc2063b5c3faf4", + "protein_translation": "MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000103" + ], + [ + "gene_synonym", + "ECK0030" + ], + [ + "gene_synonym", + "EcoGene:EG11081" + ], + [ + "gene_synonym", + "GI:16128023" + ], + [ + "gene_synonym", + "GeneID:944777" + ], + [ + "gene_synonym", + "JW0027" + ], + [ + "gene_synonym", + "NP_414570.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62623" + ], + [ + "gene_synonym", + "b0029" + ], + [ + "gene_synonym", + "ispH" + ], + [ + "gene_synonym", + "lytB" + ], + [ + "gene_synonym", + "yaaE" + ] + ], + "dna_sequence": "ATGCAGATCCTGTTGGCCAACCCGCGTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCGCGATTTGACGGTGTTTGATGCCACCTGTCCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGTCGCCGTGGCGAAGAATCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACAATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTATGACCCAGACCACGCTGTCGGTGGATGACACGTCTGATGTGATCGACGCGCTGCGTAAACGCTTCCCGAAAATTGTCGGTCCGCGCAAAGATGACATCTGCTACGCCACGACTAACCGTCAGGAAGCGGTACGCGCCCTGGCAGAACAGGCGGAAGTTGTGTTGGTGGTCGGTTCGAAAAACTCCTCCAACTCCAACCGTCTGGCGGAGCTGGCCCAGCGTATGGGCAAACGCGCGTTTTTGATTGACGATGCGAAAGACATCCAGGAAGAGTGGGTGAAAGAGGTTAAATGCGTCGGCGTGACTGCGGGCGCATCGGCTCCGGATATTCTGGTGCAGAATGTGGTGGCACGTTTGCAGCAGCTGGGCGGTGGTGAAGCCATTCCGCTGGAAGGCCGTGAAGAAAACATTGTTTTCGAAGTGCCGAAAGAGCTGCGTGTCGATATTCGTGAAGTCGATTAA", + "dna_sequence_length": 951, + "functions": [ + "4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein" + ], + "id": "CDS_28", + "location": [ + [ + "NC_000913", + 26277, + "+", + 951 + ] + ], + "md5": "932151d6d94a85f830805f6298377e7a", + "parent_gene": "", + "protein_md5": "fd663c367297cadbd81e4c8b4dbfb5a7", + "protein_translation": "MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000109" + ], + [ + "gene_synonym", + "ECK0031" + ], + [ + "gene_synonym", + "EcoGene:EG11082" + ], + [ + "gene_synonym", + "GI:16128024" + ], + [ + "gene_synonym", + "GeneID:944796" + ], + [ + "gene_synonym", + "JW0028" + ], + [ + "gene_synonym", + "NP_414571.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22564" + ], + [ + "gene_synonym", + "b0030" + ], + [ + "gene_synonym", + "rihC" + ], + [ + "gene_synonym", + "yaaF" + ] + ], + "dna_sequence": "ATGCGTTTACCTATCTTCCTCGATACTGACCCCGGCATTGACGATGCCGTCGCCATTGCCGCCGCGATTTTTGCACCCGAACTCGACCTGCAACTGATGACCACCGTCGCGGGTAATGTCTCGGTTGAGAAAACTACCCGCAATGCCCTGCAACTGCTGCATTTCTGGAATGCGGAGATTCCGCTCGCCCAAGGGGCCGCTGTGCCACTGGTACGCGCACCGCGTGATGCGGCATCTGTGCACGGCGAATCGGGAATGGCTGGCTACGACTTTGTTGAGCACAACCGAAAGCCGCTCGGGATACCGGCGTTTCTGGCGATTCGGGATGCCCTGATGCGTGCACCAGAGCCTGTTACCCTGGTGGCCATCGGCCCGTTAACCAATATTGCGCTGTTACTTTCACAATGCCCGGAATGCAAGCCGTATATTCGCCGTCTGGTGATCATGGGTGGTTCTGCCGGACGCGGCAACTGTACGCCAAACGCCGAGTTTAATATTGCTGCCGATCCAGAAGCTGCTGCCTGTGTCTTCCGCAGTGGTATTGAAATCGTCATGTGCGGTTTGGATGTCACCAATCAGGCAATATTAACTCCTGACTATCTCTCTACACTGCCGCAGTTAAACCGTACCGGGAAAATGCTTCACGCCCTGTTTAGCCACTACCGTAGCGGCAGTATGCAAAGCGGCTTGCGAATGCACGATCTCTGCGCCATCGCCTGGCTGGTGCGCCCGGACCTGTTCACTCTCAAACCCTGTTTTGTGGCAGTGGAAACTCAGGGCGAATTTACCTCAGGCACGACGGTGGTTGATATCGACGGTTGCCTGGGCAAGCCAGCCAATGTACAGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAA", + "dna_sequence_length": 915, + "functions": [ + "ribonucleoside hydrolase 3" + ], + "id": "CDS_29", + "location": [ + [ + "NC_000913", + 27293, + "+", + 915 + ] + ], + "md5": "14059a9b26eb4980d539a84f624aeb28", + "parent_gene": "", + "protein_md5": "599f6680062a0635ee2eea6ddbb3bf13", + "protein_translation": "MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000112" + ], + [ + "gene_synonym", + "ECK0032" + ], + [ + "gene_synonym", + "EcoGene:EG10206" + ], + [ + "gene_synonym", + "GI:16128025" + ], + [ + "gene_synonym", + "GeneID:944762" + ], + [ + "gene_synonym", + "JW0029" + ], + [ + "gene_synonym", + "NP_414572.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04036" + ], + [ + "gene_synonym", + "b0031" + ], + [ + "gene_synonym", + "dapB" + ] + ], + "dna_sequence": "ATGCATGATGCAAACATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCAGGCGGCGCTGGCATTAGAGGGCGTGCAGTTGGGCGCTGCGCTGGAGCGTGAAGGATCTTCTTTACTGGGCAGCGACGCCGGTGAGCTGGCCGGAGCCGGGAAAACAGGCGTTACCGTGCAAAGCAGCCTCGATGCGGTAAAAGATGATTTTGATGTGTTTATCGATTTTACCCGTCCGGAAGGTACGCTGAACCATCTCGCTTTTTGTCGCCAGCATGGCAAAGGGATGGTGATCGGCACTACGGGGTTTGACGAAGCCGGTAAACAAGCAATTCGTGACGCCGCTGCCGATATTGCGATTGTCTTTGCTGCCAATTTTAGCGTTGGCGTTAACGTCATGCTTAAGCTGCTGGAGAAAGCAGCCAAAGTGATGGGTGACTACACCGATATCGAAATTATTGAAGCACATCATAGACATAAAGTTGATGCGCCGTCAGGCACCGCACTGGCAATGGGAGAGGCGATCGCCCACGCCCTTGATAAAGATCTGAAAGATTGCGCGGTCTACAGTCGTGAAGGCCACACCGGTGAACGTGTGCCTGGCACCATTGGTTTTGCCACCGTGCGTGCAGGTGACATCGTTGGTGAACATACCGCGATGTTTGCCGATATTGGCGAGCGTCTGGAGATCACCCATAAGGCGTCCAGCCGTATGACATTTGCTAACGGCGCGGTAAGATCGGCTTTGTGGTTGAGTGGTAAGGAAAGCGGTCTTTTTGATATGCGAGATGTACTTGATCTCAATAATTTGTAA", + "dna_sequence_length": 822, + "functions": [ + "dihydrodipicolinate reductase" + ], + "id": "CDS_30", + "location": [ + [ + "NC_000913", + 28374, + "+", + 822 + ] + ], + "md5": "28cc3eb5f46931d95b4a02663e65e9c1", + "parent_gene": "", + "protein_md5": "f639e2efb23c6eacc2d42f822e5ad56f", + "protein_translation": "MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000118" + ], + [ + "gene_synonym", + "ECK0033" + ], + [ + "gene_synonym", + "EcoGene:EG10134" + ], + [ + "gene_synonym", + "GI:16128026" + ], + [ + "gene_synonym", + "GeneID:949025" + ], + [ + "gene_synonym", + "JW0030" + ], + [ + "gene_synonym", + "NP_414573.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6F1" + ], + [ + "gene_synonym", + "arg" + ], + [ + "gene_synonym", + "b0032" + ], + [ + "gene_synonym", + "cap" + ], + [ + "gene_synonym", + "carA" + ], + [ + "gene_synonym", + "pyrA" + ] + ], + "dna_sequence": "TTGATTAAGTCAGCGCTATTGGTTCTGGAAGACGGAACCCAGTTTCACGGTCGGGCCATAGGGGCAACAGGTTCGGCGGTTGGGGAAGTCGTTTTCAATACTTCAATGACCGGTTATCAAGAAATCCTCACTGATCCTTCCTATTCTCGTCAAATCGTTACTCTTACTTATCCCCATATTGGCAATGTCGGCACCAATGACGCCGATGAAGAATCTTCTCAGGTACATGCACAAGGTCTGGTGATTCGCGACCTGCCGCTGATTGCCAGCAACTTCCGTAATACCGAAGACCTCTCTTCTTACCTGAAACGCCATAACATCGTGGCGATTGCCGATATCGATACCCGTAAGCTGACGCGTTTACTGCGCGAGAAAGGCGCACAGAATGGCTGCATTATCGCGGGCGATAACCCGGATGCGGCGCTGGCGTTAGAAAAAGCCCGCGCGTTCCCAGGTCTGAATGGCATGGATCTGGCAAAAGAAGTGACCACCGCAGAAGCCTATAGCTGGACACAAGGGAGCTGGACGTTGACCGGTGGCCTGCCAGAAGCGAAAAAAGAAGACGAGCTGCCGTTCCACGTCGTGGCTTATGATTTTGGTGCCAAGCGCAACATCCTGCGGATGCTGGTGGATAGAGGCTGTCGCCTGACCATCGTTCCGGCGCAAACTTCTGCGGAAGATGTGCTGAAAATGAATCCAGACGGCATCTTCCTCTCCAACGGTCCTGGCGACCCGGCCCCGTGCGATTACGCCATTACCGCCATCCAGAAATTCCTCGAAACCGATATTCCGGTATTCGGCATCTGTCTCGGTCATCAGCTGCTGGCGCTGGCGAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCGTTGTTCGACCACTTTATCGAGTTAATTGAGCAGTACCGTAAAACCGCTAAGTAA", + "dna_sequence_length": 1149, + "functions": [ + "carbamoyl phosphate synthetase small subunit, glutamine amidotransferase" + ], + "id": "CDS_31", + "location": [ + [ + "NC_000913", + 29651, + "+", + 1149 + ] + ], + "md5": "71b58bbeec64b8c607ac2914dc52ff99", + "parent_gene": "", + "protein_md5": "4bb7e4577040102b282c076c07ca7304", + "protein_translation": "MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000121" + ], + [ + "gene_synonym", + "ECK0034" + ], + [ + "gene_synonym", + "EcoGene:EG10135" + ], + [ + "gene_synonym", + "GI:16128027" + ], + [ + "gene_synonym", + "GeneID:944775" + ], + [ + "gene_synonym", + "JW0031" + ], + [ + "gene_synonym", + "NP_414574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00968" + ], + [ + "gene_synonym", + "b0033" + ], + [ + "gene_synonym", + "cap" + ], + [ + "gene_synonym", + "carB" + ], + [ + "gene_synonym", + "pyrA" + ] + ], + "dna_sequence": "ATGCCAAAACGTACAGATATAAAAAGTATCCTGATTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTGGTGAACTCCAACCCGGCGACCATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTTGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACGATGGGCGGTCAGACGGCGCTGAACTGCGCGCTGGAGCTGGAACGTCAGGGCGTGTTGGAAGAGTTCGGTGTCACCATGATTGGTGCCACTGCCGATGCGATTGATAAAGCAGAAGACCGCCGTCGTTTCGACGTAGCGATGAAGAAAATTGGTCTGGAAACCGCGCGTTCCGGTATCGCACACACGATGGAAGAAGCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTGGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATGGGCATCCACACCGGTGACTCCATCACTGTCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAACGGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGCCTCCTTCGAGCCGTCCATCGACTATGTGGTTACTAAAATTCCTCGCTTCAACTTCGAAAAATTCGCCGGTGCTAACGACCGTCTGACCACTCAGATGAAATCGGTTGGCGAAGTGATGGCGATTGGTCGCACGCAGCAGGAATCCCTGCAAAAAGCGCTGCGCGGCCTGGAAGTCGGTGCGACTGGATTCGACCCGAAAGTGAGCCTGGATGACCCGGAAGCGTTAACCAAAATCCGTCGCGAACTGAAAGACGCAGGCGCAGATCGTATCTGGTACATCGCCGATGCGTTCCGTGCGGGCCTGTCTGTGGACGGCGTCTTCAACCTGACCAACATTGACCGCTGGTTCCTGGTACAGATTGAAGAGCTGGTGCGTCTGGAAGAGAAAGTGGCGGAAGTGGGCATCACTGGCCTGAACGCTGACTTCCTGCGCCAGCTGAAACGCAAAGGCTTTGCCGATGCGCGCTTGGCAAAACTGGCGGGCGTACGCGAAGCGGAAATCCGTAAGCTGCGTGACCAGTATGACCTGCACCCGGTTTATAAGCGCGTGGATACCTGTGCGGCAGAGTTCGCCACCGACACCGCTTACATGTACTCCACTTATGAAGAAGAGTGCGAAGCGAATCCGTCTACCGACCGTGAAAAAATCATGGTGCTTGGCGGCGGCCCGAACCGTATCGGTCAGGGTATCGAATTCGACTACTGTTGCGTACACGCCTCGCTGGCGCTGCGCGAAGACGGTTACGAAACCATTATGGTTAACTGTAACCCGGAAACCGTCTCCACCGACTACGACACTTCCGACCGCCTCTACTTCGAGCCGGTAACTCTGGAAGATGTGCTGGAAATCGTGCGTATCGAGAAGCCGAAAGGCGTTATCGTCCAGTACGGCGGTCAGACCCCGCTGAAACTGGCGCGCGCGCTGGAAGCTGCTGGCGTACCGGTTATCGGCACCAGCCCGGATGCTATCGACCGTGCAGAAGACCGTGAACGCTTCCAGCATGCGGTTGAGCGTCTGAAACTGAAACAACCGGCGAACGCCACCGTTACCGCTATTGAAATGGCGGTAGAGAAGGCGAAAGAGATTGGCTACCCGCTGGTGGTACGTCCGTCTTACGTTCTCGGCGGTCGGGCGATGGAAATCGTCTATGACGAAGCTGACCTGCGTCGCTACTTCCAGACGGCGGTCAGCGTGTCTAACGATGCGCCAGTGTTGCTGGACCACTTCCTCGATGACGCGGTAGAAGTTGACGTGGATGCCATCTGCGACGGCGAAATGGTGCTGATTGGCGGCATCATGGAGCATATTGAGCAGGCGGGCGTGCACTCCGGTGACTCCGCATGTTCTCTGCCAGCCTACACCTTAAGTCAGGAAATTCAGGATGTGATGCGCCAGCAGGTGCAGAAACTGGCCTTCGAATTGCAGGTGCGCGGCCTGATGAACGTGCAGTTTGCGGTGAAAAACAACGAAGTCTACCTGATTGAAGTTAACCCGCGTGCGGCGCGTACCGTTCCGTTCGTCTCCAAAGCCACCGGCGTACCGCTGGCAAAAGTGGCGGCGCGCGTGATGGCTGGCAAATCGCTGGCTGAGCAGGGCGTAACCAAAGAAGTTATCCCGCCGTACTACTCGGTGAAAGAAGTGGTGCTGCCGTTCAATAAATTCCCGGGCGTTGACCCGCTGTTAGGGCCAGAAATGCGCTCTACCGGGGAAGTCATGGGCGTGGGCCGCACCTTCGCTGAAGCGTTTGCCAAAGCGCAGCTGGGCAGCAACTCCACCATGAAGAAACACGGTCGTGCGCTGCTTTCCGTGCGCGAAGGCGATAAAGAACGCGTGGTGGACCTGGCGGCAAAACTGCTGAAACAGGGCTTCGAGCTGGATGCGACCCACGGCACGGCGATTGTGCTGGGCGAAGCAGGTATCAACCCGCGTCTGGTAAACAAGGTGCATGAAGGCCGTCCGCACATTCAGGACCGTATCAAGAATGGCGAATATACCTACATCATCAACACCACCTCAGGCCGTCGTGCGATTGAAGACTCCCGCGTGATTCGTCGCAGTGCGCTGCAATATAAAGTGCATTACGACACCACCCTGAACGGCGGCTTTGCCACCGCGATGGCGCTGAATGCCGATGCGACTGAAAAAGTAATTTCGGTGCAGGAAATGCACGCACAGATCAAATAA", + "dna_sequence_length": 3222, + "functions": [ + "carbamoyl-phosphate synthase large subunit" + ], + "id": "CDS_32", + "location": [ + [ + "NC_000913", + 30817, + "+", + 3222 + ] + ], + "md5": "155e489300d697103c837e36bb6d2481", + "parent_gene": "", + "protein_md5": "ed1aec2733811466d12b0a050407a275", + "protein_translation": "MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK", + "protein_translation_length": 1073, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000125" + ], + [ + "gene_synonym", + "ECK0035" + ], + [ + "gene_synonym", + "EcoGene:EG13451" + ], + [ + "gene_synonym", + "GI:90111079" + ], + [ + "gene_synonym", + "GeneID:944795" + ], + [ + "gene_synonym", + "JW0033" + ], + [ + "gene_synonym", + "NP_414576.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE58" + ], + [ + "gene_synonym", + "b0034" + ], + [ + "gene_synonym", + "caiF" + ] + ], + "dna_sequence": "ATGTGTGAAGGATATGTTGAAAAACCACTCTACTTGTTAATCGCCGAATGGATGATGGCTGAAAATCGGTGGGTGATAGCAAGAGAGATCTCTATTCATTTCGATATTGAACACAGCAAGGCGGTTAATACCCTGACTTATATTCTGTCGGAAGTCACAGAAATAAGCTGCGAAGTTAAGATGATCCCTAATAAGCTGGAAGGGCGGGGATGCCAGTGTCAGCGACTGGTTAAAGTGGTCGATATCGATGAGCAAATTTACGCGCGCCTGCGCAATAACAGTCGGGAAAAATTAGTCGGTGTAAGAAAGACGCCGCGTATTCCTGCCGTTCCGCTCACGGAACTTAACCGCGAGCAGAAGTGGCAGATGATGTTGTCAAAGAGTATGCGTCGTTAA", + "dna_sequence_length": 396, + "functions": [ + "cai operon transcriptional activator" + ], + "id": "CDS_33", + "location": [ + [ + "NC_000913", + 34300, + "+", + 396 + ] + ], + "md5": "f13223163c7d85237656defaa37a4ba7", + "parent_gene": "", + "protein_md5": "61d804f5e6839c42806f4d4e18fd3c6d", + "protein_translation": "MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000128" + ], + [ + "gene_synonym", + "ECK0036" + ], + [ + "gene_synonym", + "EcoGene:EG12608" + ], + [ + "gene_synonym", + "GI:90111080" + ], + [ + "gene_synonym", + "GeneID:948999" + ], + [ + "gene_synonym", + "JW5004" + ], + [ + "gene_synonym", + "NP_414577.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39206" + ], + [ + "gene_synonym", + "b0035" + ], + [ + "gene_synonym", + "caiE" + ] + ], + "dna_sequence": "GTGAGCTATTACGCCTTTGAGGGGTTAATTCCGGTGGTTCACCCGACGGCGTTTGTCCATCCCAGTGCCGTCTTGATTGGCGATGTGATTGTGGGAGCCGGTGTCTACATCGGCCCACTCGCCTCACTGCGTGGTGACTACGGGCGGTTGATCGTGCAAGCGGGAGCCAATATTCAGGATGGCTGCATTATGCATGGCTACTGCGACACTGACACTATCGTTGGGGAAAACGGCCATATCGGGCACGGAGCGATCCTGCATGGTTGTTTGATTGGTCGCGATGCATTGGTCGGGATGAACAGCGTGATTATGGATGGCGCGGTCATTGGCGAAGAGAGCATTGTTGCCGCCATGAGCTTTGTCAAAGCGGGCTTTCGCGGCGAGAAACGCCAGTTGTTGATGGGTACGCCAGCCCGCGCTGTACGCAATGTTAGTGACGACGAGTTACACTGGAAACGGTTGAATACCAAAGAGTATCAGGATCTTGTCGGGCGCTGTCATGTATCGTTACATGAAACGCAGCCACTGAGGCAAATGGAGGAAAATCGCCCCCGTTTGCAGGGGACGACGGATGTGACGCCTAAACGGTGA", + "dna_sequence_length": 591, + "functions": [ + "stimulator of CaiD and CaiB enzyme activities" + ], + "id": "CDS_34", + "location": [ + [ + "NC_000913", + 35371, + "-", + 591 + ] + ], + "md5": "e8437dd8a9320af122b7690a5f102577", + "parent_gene": "", + "protein_md5": "ae7caab41013348183df893ed0613591", + "protein_translation": "MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000130" + ], + [ + "gene_synonym", + "ECK0037" + ], + [ + "gene_synonym", + "EcoGene:EG11557" + ], + [ + "gene_synonym", + "GI:221800779" + ], + [ + "gene_synonym", + "GeneID:948995" + ], + [ + "gene_synonym", + "JW0035" + ], + [ + "gene_synonym", + "NP_414578.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31551" + ], + [ + "gene_synonym", + "b0036" + ], + [ + "gene_synonym", + "caiD" + ], + [ + "gene_synonym", + "yaaL" + ] + ], + "dna_sequence": "ATGAGTGAATCATTACATCTGACCCGCAATGGATCAATTCTGGAAATTACCCTTGATCGTCCAAAAGCGAATGCTATTGATGCAAAAACCAGCTTTGAAATGGGCGAAGTATTTCTAAATTTCCGTGACGATCCGCAATTACGTGTCGCCATTATTACCGGTGCCGGAGAGAAGTTCTTTTCCGCGGGCTGGGATTTAAAAGCGGCAGCAGAAGGCGAAGCACCGGATGCTGACTTTGGTCCGGGTGGTTTTGCGGGATTAACCGAAATTTTCAATCTCGACAAACCGGTTATCGCAGCTGTGAACGGCTATGCCTTTGGCGGCGGCTTTGAACTGGCGCTGGCGGCAGATTTTATTGTTTGTGCCGATAACGCCAGCTTCGCCCTGCCGGAAGCCAAACTGGGCATCGTTCCTGACAGCGGCGGTGTGCTGCGTCTGCCGAAGATCCTGCCGCCTGCCATCGTCAATGAAATGGTGATGACCGGCAGACGAATGGGCGCAGAAGAGGCGCTGCGTTGGGGGATAGTCAACCGCGTGGTTAGCCAGGCGGAACTGATGGATAACGCCCGCGAACTGGCTCAGCAGCTGGTTAACAGCGCCCCGCTGGCGATTGCGGCGCTGAAAGAGATCTACCGCACCACCAGCGAAATGCCGGTAGAAGAAGCGTATCGCTATATTCGCAGCGGCGTGTTGAAACACTATCCATCGGTTCTGCATTCGGAAGATGCCATTGAAGGGCCGCTGGCGTTTGCCGAGAAGCGCGATCCGGTGTGGAAAGGACGTTAA", + "dna_sequence_length": 786, + "functions": [ + "carnitinyl-CoA dehydratase" + ], + "id": "CDS_35", + "location": [ + [ + "NC_000913", + 36162, + "-", + 786 + ] + ], + "md5": "6ef2e64a3eb6c05f537c6cb72ae4f783", + "parent_gene": "", + "protein_md5": "d9c8f73871e078c879e4ff865e64a61d", + "protein_translation": "MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000133" + ], + [ + "gene_synonym", + "ECK0038" + ], + [ + "gene_synonym", + "EcoGene:EG11558" + ], + [ + "gene_synonym", + "GI:221800780" + ], + [ + "gene_synonym", + "GeneID:944886" + ], + [ + "gene_synonym", + "JW0036" + ], + [ + "gene_synonym", + "NP_414579.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31552" + ], + [ + "gene_synonym", + "b0037" + ], + [ + "gene_synonym", + "caiC" + ], + [ + "gene_synonym", + "yaaM" + ] + ], + "dna_sequence": "ATGGATATCATTGGCGGACAACATCTACGTCAAATGTGGGACGATCTTGCGGACGTTTACGGTCATAAAACGGCGCTGATTTGTGAATCCAGCGGCGGAGTCGTTAACCGGTATAGTTATCTTGAGTTAAATCAGGAGATTAACCGCACGGCAAACCTGTTTTATACGCTGGGGATTCGCAAAGGCGACAAGGTTGCACTACATCTCGACAACTGCCCGGAATTTATCTTTTGCTGGTTCGGGCTGGCAAAAATTGGCGCGATTATGGTGCCGATTAACGCCCGCCTGTTGTGCGAGGAAAGCGCGTGGATCCTGCAAAATAGCCAGGCGTGCCTGCTGGTGACCAGTGCGCAATTCTATCCTATGTATCAACAGATTCAGCAGGAAGATGCCACTCAATTGCGGCACATTTGCCTGACAGATGTGGCACTTCCCGCTGATGATGGCGTGAGTTCGTTTACTCAACTGAAAAATCAACAACCTGCCACCTTGTGCTATGCACCGCCGCTATCGACTGACGATACGGCGGAAATTCTCTTCACCTCCGGCACCACCTCCCGACCGAAAGGTGTGGTGATTACCCATTACAACCTGCGCTTCGCTGGATATTACTCCGCCTGGCAGTGTGCACTGCGTGACGATGACGTCTACCTGACGGTAATGCCTGCGTTTCATATCGATTGCCAGTGTACTGCGGCGATGGCGGCGTTTTCTGCCGGGGCCACCTTTGTGCTGGTCGAGAAATACAGCGCCCGCGCCTTCTGGGGACAGGTACAGAAGTACCGCGCCACCGTTACCGAATGTATTCCGATGATGATCCGTACGTTGATGGTACAGCCGCCTTCAGCGAACGATCAGCAACACCGCCTGCGGGAAGTGATGTTTTATCTCAACTTGTCGGAGCAGGAAAAAGATGCGTTTTGTGAACGCTTCGGCGTTCGCTTGCTGACGTCTTATGGGATGACGGAAACCATTGTGGGCATTATCGGCGATCGTCCTGGCGATAAACGACGCTGGCCGTCGATTGGTCGGGTGGGGTTTTGCTACGAAGCGGAGATCCGCGACGATCACAATCGCCCGCTCCCGGCTGGTGAGATCGGTGAAATCTGCATTAAAGGCATACCTGGGAAAACCATCTTCAAAGAGTACTTTCTCAACCCACAAGCCACTGCGAAAGTGCTGGAAGCCGATGGCTGGCTGCATACCGGCGATACCGGATACCGCGACGAAGAGGACTTTTTTTATTTCGTCGATCGCCGCTGCAATATGATTAAACGTGGCGGCGAGAATGTCTCCTGCGTGGAGCTGGAAAATATTATCGCCGCGCACCCGAAAATTCAGGACATCGTGGTTGTGGGTATTAAAGATTCGATTCGCGATGAAGCCATCAAAGCATTTGTGGTGCTGAATGAAGGTGAAACATTGAGCGAAGAGGAATTTTTCCGCTTCTGCGAACAAAATATGGCGAAATTTAAAGTGCCCTCTTATCTGGAGATCAGAAAAGATCTGCCACGTAATTGCTCGGGGAAAATAATTAGAAAGAATCTGAAATAA", + "dna_sequence_length": 1554, + "functions": [ + "putative crotonobetaine/carnitine-CoA ligase" + ], + "id": "CDS_36", + "location": [ + [ + "NC_000913", + 37824, + "-", + 1554 + ] + ], + "md5": "e0828c6bd385b202dc42cd8f8d438c9a", + "parent_gene": "", + "protein_md5": "a9e5fb09e2ded7f9efee0fdabc5425ed", + "protein_translation": "MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK", + "protein_translation_length": 517, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000136" + ], + [ + "gene_synonym", + "ECK0039" + ], + [ + "gene_synonym", + "EcoGene:EG11559" + ], + [ + "gene_synonym", + "GI:16128032" + ], + [ + "gene_synonym", + "GeneID:948997" + ], + [ + "gene_synonym", + "JW0037" + ], + [ + "gene_synonym", + "NP_414580.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31572" + ], + [ + "gene_synonym", + "b0038" + ], + [ + "gene_synonym", + "caiB" + ], + [ + "gene_synonym", + "yaaN" + ] + ], + "dna_sequence": "ATGGATCATCTACCCATGCCGAAATTCGGGCCGTTGGCCGGATTGCGCGTTGTCTTCTCCGGTATCGAAATCGCCGGACCGTTTGCCGGGCAAATGTTCGCAGAATGGGGCGCGGAAGTTATCTGGATCGAGAACGTCGCCTGGGCCGACACCATTCGCGTTCAACCGAACTACCCGCAACTCTCCCGCCGCAATTTGCACGCGCTGTCGTTAAATATTTTCAAAGATGAAGGCCGCGAAGCGTTTCTGAAATTAATGGAAACCACCGATATCTTCATCGAAGCCAGTAAAGGTCCGGCCTTTGCCCGTCGTGGCATTACCGATGAAGTACTGTGGCAGCACAACCCGAAACTGGTTATCGCTCACCTGTCCGGTTTTGGTCAGTACGGCACCGAGGAGTACACCAATCTTCCGGCCTATAACACTATCGCCCAGGCCTTTAGTGGTTACCTGATTCAGAACGGTGATGTTGACCAGCCAATGCCTGCCTTCCCGTATACCGCCGATTACTTTTCTGGCCTGACCGCCACCACGGCGGCGCTGGCAGCACTGCATAAAGTGCGTGAAACCGGTAAAGGCGAAAGTATCGACATCGCCATGTATGAAGTGATGCTGCGTATGGGCCAGTACTTCATGATGGATTACTTCAACGGCGGCGAAATGTGCCCGCGCATGAGCAAAGGTAAAGATCCCTACTACGCCGGTTGCGGTCTGTATAAATGTGCCGACGGCTACATCGTGATGGAACTGGTGGGCATTACCCAAATTGAAGAGTGCTTTAAAGATATTGGCCTCGCACATCTGCTTGGCACGCCAGAAATCCCGGAAGGCACTCAGCTTATCCACCGTATCGAATGCCCTTACGGCCCACTGGTTGAAGAGAAACTCGATGCCTGGCTGGCGACACATACCATCGCGGAAGTAAAAGAACGCTTTGCTGAACTGAATATCGCCTGCGCCAAAGTGCTGACCGTACCGGAACTGGAAAGCAATCCACAGTATGTGGCTCGCGAATCAATCACTCAGTGGCAAACGATGGATGGTCGCACCTGCAAAGGGCCGAACATCATGCCGAAATTCAAAAATAACCCCGGACAAATCTGGCGCGGAATGCCCTCACATGGCATGGACACGGCTGCCATTTTGAAAAATATCGGCTACAGCGAAAACGACATTCAGGAGTTGGTCAGCAAAGGTCTGGCCAAAGTTGAGGACTAA", + "dna_sequence_length": 1218, + "functions": [ + "crotonobetainyl CoA:carnitine CoA transferase" + ], + "id": "CDS_37", + "location": [ + [ + "NC_000913", + 39115, + "-", + 1218 + ] + ], + "md5": "654fd95eb47e1ad688ea155db76d1663", + "parent_gene": "", + "protein_md5": "f5f726e4fa4f96657eb9f84c388113b4", + "protein_translation": "MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000139" + ], + [ + "gene_synonym", + "ECK0040" + ], + [ + "gene_synonym", + "EcoGene:EG11560" + ], + [ + "gene_synonym", + "GI:16128033" + ], + [ + "gene_synonym", + "GeneID:949064" + ], + [ + "gene_synonym", + "JW0038" + ], + [ + "gene_synonym", + "NP_414581.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60584" + ], + [ + "gene_synonym", + "b0039" + ], + [ + "gene_synonym", + "caiA" + ], + [ + "gene_synonym", + "yaaO" + ] + ], + "dna_sequence": "ATGGATTTTAATTTAAATGATGAGCAGGAACTGTTTGTCGCCGGTATCCGCGAACTGATGGCCAGCGAAAACTGGGAGGCCTATTTTGCCGAGTGCGACCGTGACAGCGTCTACCCGGAACGTTTTGTCAAAGCACTGGCGGATATGGGTATCGACAGTCTGCTGATCCCTGAAGAGCACGGTGGTCTGGACGCGGGGTTTGTTACTCTCGCCGCCGTGTGGATGGAGCTGGGACGTCTGGGGGCACCAACCTATGTGCTGTACCAGTTGCCGGGCGGGTTCAACACCTTCCTGCGCGAAGGCACACAAGAGCAGATCGACAAAATTATGGCTTTCCGCGGCACCGGTAAGCAGATGTGGAACTCAGCGATTACCGAACCGGGCGCGGGCTCCGACGTGGGTAGCCTGAAAACGACTTATACCCGTAGAAATGGTAAGATTTATCTTAATGGTAGTAAGTGTTTTATTACCAGCAGCGCCTACACCCCGTACATCGTGGTGATGGCGCGCGACGGGGCTTCTCCGGACAAACCTGTCTACACCGAATGGTTTGTTGATATGAGCAAACCGGGCATCAAAGTGACCAAACTTGAAAAGCTCGGTCTGCGTATGGATAGCTGCTGTGAAATCACCTTTGACGACGTGGAACTGGACGAGAAAGACATGTTCGGTCGGGAAGGTAACGGCTTTAACCGCGTCAAAGAAGAGTTCGACCATGAACGTTTCCTGGTAGCCCTCACCAACTACGGTACGGCGATGTGCGCCTTTGAAGATGCGGCGCGCTACGCCAATCAGCGCGTGCAGTTTGGCGAGGCTATTGGTCGTTTCCAGTTGATTCAGGAAAAATTCGCCCACATGGCGATCAAATTAAACTCCATGAAAAACATGCTGTATGAAGCAGCGTGGAAAGCAGACAACGGCACCATCACCTCTGGCGATGCAGCGATGTGCAAATACTTCTGCGCCAATGCGGCATTTGAAGTTGTGGATAGCGCAATGCAGGTGCTGGGCGGTGTCGGGATTGCGGGCAACCACCGCATCAGCCGCTTCTGGCGTGATCTGCGTGTAGACCGCGTCTCCGGGGGATCTGACGAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAA", + "dna_sequence_length": 1143, + "functions": [ + "crotonobetaine reductase subunit II, FAD-binding" + ], + "id": "CDS_38", + "location": [ + [ + "NC_000913", + 40386, + "-", + 1143 + ] + ], + "md5": "ee41013f471c492ddbba6d8ef902e6cd", + "parent_gene": "", + "protein_md5": "fa68e48e0f4f5f7e3a1b394e6ac0e47f", + "protein_translation": "MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR", + "protein_translation_length": 380, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000141" + ], + [ + "gene_synonym", + "ECK0041" + ], + [ + "gene_synonym", + "EcoGene:EG11561" + ], + [ + "gene_synonym", + "GI:16128034" + ], + [ + "gene_synonym", + "GeneID:944765" + ], + [ + "gene_synonym", + "JW0039" + ], + [ + "gene_synonym", + "NP_414582.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31553" + ], + [ + "gene_synonym", + "b0040" + ], + [ + "gene_synonym", + "caiT" + ], + [ + "gene_synonym", + "yaaP" + ] + ], + "dna_sequence": "ATGAAGAATGAAAAGAGAAAAACGGGAATAGAACCGAAGGTTTTCTTTCCGCCGTTAATAATCGTCGGCATACTTTGTTGGCTTACAGTCAGAGATCTGGATGCAGCGAATGTCGTTATTAATGCTGTATTCAGTTACGTCACCAATGTATGGGGATGGGCATTTGAATGGTATATGGTGGTGATGCTTTTCGGTTGGTTCTGGCTGGTGTTTGGCCCGTATGCCAAAAAGCGTTTAGGTAACGAACCGCCAGAATTTAGCACCGCCAGTTGGATCTTTATGATGTTCGCCTCCTGTACGTCTGCTGCCGTACTGTTCTGGGGATCGATTGAGATCTACTACTACATCTCCACCCCGCCGTTTGGCTTAGAACCGAACTCGACAGGGGCGAAAGAGTTGGGGCTGGCTTACAGCTTGTTCCACTGGGGACCTCTGCCGTGGGCCACTTACAGCTTCCTTTCAGTCGCCTTCGCTTACTTCTTCTTTGTCCGCAAAATGGAAGTGATTCGCCCCAGCTCGACACTGGTGCCGCTGGTAGGTGAAAAACACGCCAAAGGGTTGTTCGGCACTATCGTCGACAACTTCTATCTCGTCGCCTTGATCTTCGCGATGGGTACCAGTCTGGGCCTTGCCACGCCGCTGGTGACCGAGTGTATGCAATGGTTGTTTGGCATTCCGCATACCCTGCAACTGGACGCTATCATCATTACCTGCTGGATTATCCTCAACGCCATTTGCGTCGCTTGCGGTCTGCAAAAAGGGGTACGTATCGCCAGTGACGTGCGTAGTTACCTGAGCTTCCTGATGCTGGGTTGGGTGTTCATTGTCAGCGGTGCCAGCTTCATCATGAACTACTTCACCGATTCGGTGGGGATGTTGCTGATGTATCTGCCGCGCATGTTGTTCTATACCGATCCCATCGCTAAAGGCGGCTTCCCGCAGGGCTGGACCGTGTTCTACTGGGCATGGTGGGTGATTTATGCTATCCAGATGAGTATCTTCCTCGCCCGCATCTCCCGTGGTCGTACTGTGCGTGAACTGTGCTTCGGCATGGTGCTGGGGCTGACAGCGTCAACCTGGATCCTGTGGACTGTACTCGGTAGTAACACTCTGCTGTTGATAGATAAAAACATCATCAACATTCCAAATCTGATCGAACAGTACGGTGTGGCGCGCGCCATCATTGAAACCTGGGCCGCTCTGCCACTCAGCACCGCCACCATGTGGGGCTTCTTCATCCTCTGCTTTATTGCCACCGTTACGCTGGTTAACGCCTGCTCTTATACCCTGGCGATGTCCACTTGCCGCGAAGTACGCGATGGTGAAGAACCACCTCTGCTGGTGCGTATCGGTTGGTCAATTCTGGTTGGCATTATCGGTATTGTTCTGCTGGCGCTCGGCGGCCTGAAACCGATTCAAACCGCCATTATCGCCGGAGGATGCCCGCTGTTCTTCGTCAACATTATGGTGACGCTCTCCTTTATTAAAGACGCGAAACAGAACTGGAAAGATTAA", + "dna_sequence_length": 1515, + "functions": [ + "putative transporter" + ], + "id": "CDS_39", + "location": [ + [ + "NC_000913", + 41931, + "-", + 1515 + ] + ], + "md5": "e2b00c513f67475c6d8f0a711a61d3f9", + "parent_gene": "", + "protein_md5": "38b4db6538bce110ff050407026631c8", + "protein_translation": "MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD", + "protein_translation_length": 504, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000145" + ], + [ + "gene_synonym", + "ECK0042" + ], + [ + "gene_synonym", + "EcoGene:EG11562" + ], + [ + "gene_synonym", + "GI:90111081" + ], + [ + "gene_synonym", + "GeneID:947316" + ], + [ + "gene_synonym", + "JW0040" + ], + [ + "gene_synonym", + "NP_414583.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60566" + ], + [ + "gene_synonym", + "b0041" + ], + [ + "gene_synonym", + "fixA" + ], + [ + "gene_synonym", + "yaaQ" + ] + ], + "dna_sequence": "ATGAAGATTATTACTTGCTATAAGTGCGTGCCTGATGAACAGGATATTGCGGTCAATAATGCTGATGGTTCATTAGACTTCAGCAAAGCCGATGCCAAAATAAGCCAATACGATCTCAACGCTATTGAAGCGGCTTGCCAGCTAAAGCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAGCAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGAAATCCTCAATATTCCGGCAGTTAACGGCGTCAGCAAAATTATCTCCCTGACGGCAGATACCCTCACCGTTGAGCGCGAACTGGAAGATGAAACCGAAACCTTAAGCATTCCGCTGCCTGCGGTTGTTGCTGTTTCCACTGATATCAACTCCCCACAAATTCCTTCGATGAAAGCCATTCTCGGCGCGGCGAAAAAGCCCGTCCAGGTATGGTCGGCGGCGGATATTGGTTTTAACGCAGAGGCAGCCTGGTCAGAACAACAGGTTGCCGCGCCGAAACAGCGCGAACGTCAGCGCATCGTGATTGAAGGCGACGGCGAAGAACAGATCGCCGCATTTGCTGAAAATCTTCGCAAAGTCATTTAA", + "dna_sequence_length": 771, + "functions": [ + "anaerobic carnitine reduction putative electron transfer flavoprotein subunit" + ], + "id": "CDS_40", + "location": [ + [ + "NC_000913", + 42403, + "+", + 771 + ] + ], + "md5": "c8e0a9ad48baa1234585e6c2c57a4013", + "parent_gene": "", + "protein_md5": "519318b39f87a1b89045902a8e149408", + "protein_translation": "MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000147" + ], + [ + "gene_synonym", + "ECK0043" + ], + [ + "gene_synonym", + "EcoGene:EG11563" + ], + [ + "gene_synonym", + "GI:16128036" + ], + [ + "gene_synonym", + "GeneID:948939" + ], + [ + "gene_synonym", + "JW0041" + ], + [ + "gene_synonym", + "NP_414584.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31574" + ], + [ + "gene_synonym", + "b0042" + ], + [ + "gene_synonym", + "fixB" + ], + [ + "gene_synonym", + "yaaR" + ] + ], + "dna_sequence": "ATGAACACGTTTTCTCAAGTCTGGGTATTCAGCGATACCCCTTCTCGTCTGCCGGAACTGATGAACGGTGCGCAGGCTTTAGCTAATCAAATCAACACCTTTGTCCTCAATGATGCCGACGGCGCACAGGCAATCCAGCTCGGCGCTAATCATGTCTGGAAATTAAACGGCAAACCGGACGATCGGATGATCGAAGATTACGCCGGTGTCATGGCTGACACTATTCGCCAGCACGGCGCAGACGGCCTGGTGCTGCTGCCAAACACCCGTCGCGGCAAATTACTGGCGGCAAAACTGGGTTATCGCCTTAAAGCGGCGGTGTCTAACGATGCCAGCACCGTCAGCGTACAGGACGGTAAAGCGACAGTGAAACACATGGTTTACGGTGGTCTGGCGATTGGCGAAGAACGCATTGCCACGCCGTATGCGGTACTGACCATCAGCAGCGGCACGTTCGATGCGGCTCAGCCAGACGCGTCACGCACTGGCGAAACGCACACCGTGGAGTGGCAGGCTCCGGCTGTGGCGATTACCCGCACGGCAACCCAGGCGCGCCAGAGCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGTCGCGGTATTGGCAGCAAAGAGAACATTGCGCTGGCAGAACAGCTTTGCAAGGCGATAGGTGCGGAGTTGGCCTGTTCTCGTCCGGTGGCGGAAAACGAAAAATGGATGGAGCACGAACGCTATGTCGGTATCTCCAACCTGATGCTGAAACCTGAACTGTACCTGGCGGTGGGGATCTCCGGGCAGATCCAGCACATGGTTGGCGCTAACGCGTCGCAAACCATTTTCGCCATCAATAAAGATAAAAATGCGCCGATCTTCCAGTACGCGGATTACGGCATTGTTGGCGACGCCGTGAAGATCCTTCCGGCGCTGACCGCAGCTTTAGCGCGTTGA", + "dna_sequence_length": 942, + "functions": [ + "putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein" + ], + "id": "CDS_41", + "location": [ + [ + "NC_000913", + 43188, + "+", + 942 + ] + ], + "md5": "3cf7be4aebdd7ea4d74b5b6a94b60a86", + "parent_gene": "", + "protein_md5": "a6a7192af9aac1d6a8179ccd34c0e88f", + "protein_translation": "MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000149" + ], + [ + "gene_synonym", + "ECK0044" + ], + [ + "gene_synonym", + "EcoGene:EG11564" + ], + [ + "gene_synonym", + "GI:16128037" + ], + [ + "gene_synonym", + "GeneID:948958" + ], + [ + "gene_synonym", + "JW0042" + ], + [ + "gene_synonym", + "NP_414585.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68644" + ], + [ + "gene_synonym", + "b0043" + ], + [ + "gene_synonym", + "fixC" + ], + [ + "gene_synonym", + "yaaS" + ] + ], + "dna_sequence": "ATGTCCGAAGATATCTTTGACGCCATCATCGTCGGTGCAGGGCTTGCCGGTTCGGTTGCCGCACTGGTGCTCGCCCGCGAAGGTGCGCAAGTGTTAGTTATCGAGCGTGGCAATTCCGCAGGTGCCAAGAACGTCACCGGCGGGCGTCTCTATGCCCACAGTCTGGAACACATTATTCCTGGTTTCGCCGACTCCGCCCCCGTAGAACGCCTGATCACCCATGAAAAACTCGCGTTTATGACGGAAAAGTCAGCGATGACTATGGACTACTGCAATGGTGACGAAACCTCGCCATCCCAGCGTTCTTACTCCGTTTTGCGCAGTAAATTTGATGCCTGGCTGATGGAGCAGGCCGAAGAAGCGGGCGCGCAGTTAATTACCGGGATCCGCGTCGATAACCTCGTACAGCGCGATGGCAAAGTCGTCGGTGTAGAAGCCGATGGCGATGTGATTGAAGCGAAAACGGTGATCCTTGCTGATGGGGTGAACTCCATCCTTGCCGAAAAATTGGGGATGGCAAAACGCGTCAAACCGACGGATGTGGCGGTTGGCGTGAAGGAACTGATCGAGTTACCGAAGTCGGTTATTGAAGACCGTTTTCAGTTGCAGGGTAATCAGGGGGCGGCTTGCCTGTTTGCGGGATCACCCACCGATGGCCTGATGGGCGGCGGCTTCCTTTATACCAATGAAAACACCCTGTCGCTGGGGCTGGTTTGTGGTTTGCATCATCTGCATGACGCGAAAAAATCGGTGCCGCAAATGCTGGAAGATTTCAAACAGCATCCGGCCGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCAACATGCTGCCGGAGTTGGTTGGTGACGGCGTATTGATTGCCGGTGATGCCGCCGGAATGTGTATGAACCTCGGTTTTACCATTCGCGGTATGGATCTGGCGATTGCCGCCGGGGAAGCCGCAGCAAAAACCGTGCTTTCAGCGATGAAAAGCGACGATTTCAGTAAGCAAAAACTGGCGGAATATCGTCAGCATCTTGAGAGTGGTCCGCTGCGCGATATGCGTATGTACCAGAAACTACCGGCGTTCCTTGATAACCCACGCATGTTTAGCGGCTACCCGGAGCTGGCGGTGGGTGTGGCGCGTGACCTGTTCACCATTGATGGCAGCGCGCCGGAACTGATGCGCAAGAAAATCCTCCGCCACGGCAAGAAAGTGGGCTTCATCAATCTAATCAAGGATGGCATGAAAGGAGTGACCGTTTTATGA", + "dna_sequence_length": 1287, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_42", + "location": [ + [ + "NC_000913", + 44180, + "+", + 1287 + ] + ], + "md5": "945833d424ca91037c246a3d80b1ccba", + "parent_gene": "", + "protein_md5": "a87c39e41931e84f94d7b94331865e2a", + "protein_translation": "MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000151" + ], + [ + "gene_synonym", + "ECK0045" + ], + [ + "gene_synonym", + "EcoGene:EG11565" + ], + [ + "gene_synonym", + "GI:16128038" + ], + [ + "gene_synonym", + "GeneID:948590" + ], + [ + "gene_synonym", + "JW0043" + ], + [ + "gene_synonym", + "NP_414586.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68646" + ], + [ + "gene_synonym", + "b0044" + ], + [ + "gene_synonym", + "fixX" + ], + [ + "gene_synonym", + "yaaT" + ] + ], + "dna_sequence": "ATGACTTCTCCCGTCAATGTGGACGTCAAACTGGGCGTCAATAAATTCAATGTCGATGAAGAGCATCCGCACATTGTTGTGAAGGCCGATGCTGATAAACAGGCGCTGGAGCTGCTGGTGAAAGCGTGCCCCGCAGGTCTGTACAAGAAGCAGGATGACGGCAGTGTGCGCTTCGATTACGCCGGATGTCTGGAGTGCGGCACCTGTCGCATTCTGGGGCTGGGGTCGGCGCTGGAACAGTGGGAATACCCGCGCGGCACCTTTGGTGTGGAGTTCCGTTACGGCTGA", + "dna_sequence_length": 288, + "functions": [ + "putative 4Fe-4S ferredoxin-type protein" + ], + "id": "CDS_43", + "location": [ + [ + "NC_000913", + 45463, + "+", + 288 + ] + ], + "md5": "fb893d4a48aae049a6b9501763fab666", + "parent_gene": "", + "protein_md5": "25c176104b8a298c5e47bbc96315ab21", + "protein_translation": "MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000156" + ], + [ + "gene_synonym", + "ECK0046" + ], + [ + "gene_synonym", + "EcoGene:EG11566" + ], + [ + "gene_synonym", + "GI:16128039" + ], + [ + "gene_synonym", + "GeneID:944766" + ], + [ + "gene_synonym", + "JW0044" + ], + [ + "gene_synonym", + "NP_414587.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31679" + ], + [ + "gene_synonym", + "b0045" + ], + [ + "gene_synonym", + "yaaU" + ], + [ + "gene_synonym", + "yabE" + ] + ], + "dna_sequence": "ATGCAACCGTCCAGAAACTTTGACGATCTCAAATTCTCCTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGTCCGTTTCTGGATGGTTATGTACTGGTAATGATTGGCGTGGCGCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGCCACCTCAATGATCACCGAGTTCTCCAGTACCCGTCAGCGGGCGTTTTCCATCAGCTTTATTGCCGCGATGTGGTATGTCGGCGCGACCTGTGCCGATCTGGTCGGCTACTGGCTTTATGATGTGGAAGGCGGCTGGCGCTGGATGCTGGGTAGCGCGGCGATCCCCTGTTTGTTGATTTTGATTGGTCGATTCGAACTGCCTGAATCTCCCCGCTGGTTATTACGCAAAGGGCGAGTAAAAGAGTGCGAAGAGATGATGATCAAACTGTTTGGCGAACCGGTGGCTTTCGATGAAGAGCAGCCGCAGCAAACCCGTTTTCGCGATCTGTTTAATCGCCGCCATTTTCCTTTTGTTCTGTTTGTTGCCGCCATCTGGACCTGCCAGGTGATCCCAATGTTCGCCATTTACACCTTTGGCCCGCAAATCGTTGGTTTGTTGGGATTGGGGGTTGGCAAAAACGCGGCACTAGGGAATGTGGTGATTAGCCTGTTCTTTATGCTCGGCTGTATTCCGCCGATGCTGTGGTTAAACACTGCCGGACGGCGTCCATTGTTGATTGGCAGCTTTGCCATGATGACGCTGGCGCTGGCGGTTTTGGGGCTAATCCCGGATATGGGGATCTGGCTGGTAGTGATGGCCTTTGCGGTGTATGCCTTTTTCTCTGGCGGGCCGGGTAATTTGCAGTGGCTCTATCCTAATGAACTCTTCCCGACAGATATCCGCGCCTCTGCCGTGGGCGTGATTATGTCCTTAAGTCGTATTGGCACCATTGTTTCGACCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGACCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAA", + "dna_sequence_length": 1332, + "functions": [ + "putative MFS sugar transporter", + "membrane protein" + ], + "id": "CDS_44", + "location": [ + [ + "NC_000913", + 45807, + "+", + 1332 + ] + ], + "md5": "14cff3df61bcc0a159cbd738e7203031", + "parent_gene": "", + "protein_md5": "b7dfd486a24cdf66bca7ff9b4c27866d", + "protein_translation": "MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000159" + ], + [ + "gene_synonym", + "ECK0047" + ], + [ + "gene_synonym", + "EcoGene:EG11568" + ], + [ + "gene_synonym", + "GI:16128040" + ], + [ + "gene_synonym", + "GeneID:944767" + ], + [ + "gene_synonym", + "JW0045" + ], + [ + "gene_synonym", + "NP_414588.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A754" + ], + [ + "gene_synonym", + "b0046" + ], + [ + "gene_synonym", + "kefF" + ], + [ + "gene_synonym", + "yabF" + ] + ], + "dna_sequence": "ATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTTACGGTCATGGCGGCACGGCGCTGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGCCCATCATGGATAG", + "dna_sequence_length": 531, + "functions": [ + "potassium-efflux system ancillary protein for KefC, glutathione-regulated", + "quinone oxidoreductase, FMN-dependent" + ], + "id": "CDS_45", + "location": [ + [ + "NC_000913", + 47246, + "+", + 531 + ] + ], + "md5": "d701061637135de3d8c43b53c115f0aa", + "parent_gene": "", + "protein_md5": "61913914683c9ecef01d172aaaa9153e", + "protein_translation": "MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000161" + ], + [ + "gene_synonym", + "ECK0048" + ], + [ + "gene_synonym", + "EcoGene:EG10521" + ], + [ + "gene_synonym", + "GI:16128041" + ], + [ + "gene_synonym", + "GeneID:944773" + ], + [ + "gene_synonym", + "JW0046" + ], + [ + "gene_synonym", + "NP_414589.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03819" + ], + [ + "gene_synonym", + "b0047" + ], + [ + "gene_synonym", + "kefC" + ], + [ + "gene_synonym", + "trkC" + ] + ], + "dna_sequence": "ATGGATAGCCATACGCTGATTCAGGCGCTGATTTATCTCGGTTCGGCAGCGCTGATTGTACCCATTGCGGTACGTCTTGGTCTGGGATCGGTACTTGGCTACCTGATCGCCGGCTGCATTATTGGCCCGTGGGGGCTGCGACTGGTGACCGATGCCGAATCTATTCTGCACTTTGCCGAGATTGGGGTGGTGCTGATGCTGTTTATTATCGGCCTCGAACTCGATCCACAAAGGCTGTGGAAGCTGCGTGCGGCAGTGTTCGGCTGTGGCGCATTGCAGATGGTGATTTGCGGCGGCCTGCTGGGGCTGTTCTGCATGTTACTTGGGCTGCGCTGGCAGGTCGCGGAATTGATCGGCATGACGCTGGCGCTCTCCTCTACGGCGATTGCCATGCAGGCGATGAATGAACGCAATCTGATGGTGACGCAAATGGGTCGCAGTGCCTTTGCGGTGCTGCTGTTCCAGGATATCGCGGCGATCCCGCTGGTGGCGATGATTCCGCTACTGGCAACGAGCAGTGCCTCGACGACGATGGGCGCATTTGCTCTCTCGGCGTTAAAAGTGGCGGGTGCGCTGGTGCTGGTGGTATTGCTGGGGCGCTATGTCACGCGTCCGGCGCTGCGTTTTGTAGCCCGCTCTGGCTTGCGGGAAGTGTTTAGTGCCGTGGCGTTATTCCTCGTGTTTGGCTTTGGTTTGCTGCTGGAAGAGGTCGGCTTGTCGATGGCGATGGGCGCGTTTCTGGCGGGCGTACTGCTGGCAAGCTCGGAATACCGTCATGCGCTGGAGAGCGATATCGAACCATTTAAAGGTTTGCTGTTGGGGCTGTTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGCTGCTCGGTTTCCTCATCATCAAAATCGCCATGCTGTGGCTGATTGCCCGACCGTTGCAAGTGCCAAATAAACAGCGTCGTTGGTTTGCGGTGTTGTTAGGGCAGGGCAGTGAGTTTGCCTTTGTGGTATTTGGCGCGGCGCAGATGGCGAATGTGCTGGAGCCGGAGTGGGCGAAATCGCTGACCCTGGCGGTGGCGCTGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCAATCGCCTTGAGCAATCTTCTACTGAGGAAGCGCGTGAAGCCGATGAGATCGACGAAGAACAGCCGCGCGTGATTATCGCCGGATTCGGTCGTTTTGGGCAGATTACCGGACGTTTACTGCTCTCCAGCGGGGTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTGCCCGCGCCCGCGATGTCGACCACTACATTCGTTTGCGTCAGGCAGGCGTTGAAAAGCCGGAGCGTGAAACCTTCGAAGGTGCGCTGAAAACCGGGCGTCTGGCACTGGAAAGTTTAGGTCTGGGGCCGTATGAAGCGCGAGAACGTGCCGATGTGTTCCGCCGCTTTAATATTCAGATGGTGGAAGAGATGGCAATGGTTGAGAACGACACCAAAGCCCGCGCGGCGGTCTATAAACGCACCAGCGCGATGTTAAGTGAGATCATTACCGAGGACCGCGAACATCTGTCATTAATTCAACGACATGGCTGGCAGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAA", + "dna_sequence_length": 1863, + "functions": [ + "potassium:proton antiporter" + ], + "id": "CDS_46", + "location": [ + [ + "NC_000913", + 47769, + "+", + 1863 + ] + ], + "md5": "bb5d663be7f36abc952284e79c3ebd8b", + "parent_gene": "", + "protein_md5": "05e52805c257ab46aedd76f2937d2a46", + "protein_translation": "MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGCGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS", + "protein_translation_length": 620, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000164" + ], + [ + "gene_synonym", + "ECK0049" + ], + [ + "gene_synonym", + "EcoGene:EG10326" + ], + [ + "gene_synonym", + "GI:16128042" + ], + [ + "gene_synonym", + "GeneID:944790" + ], + [ + "gene_synonym", + "JW0047" + ], + [ + "gene_synonym", + "NP_414590.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABQ4" + ], + [ + "gene_synonym", + "b0048" + ], + [ + "gene_synonym", + "folA" + ], + [ + "gene_synonym", + "tmrA" + ] + ], + "dna_sequence": "ATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGAAGTCGGTGGATGAAGCCATCGCGGCGTGTGGTGACGTACCAGAAATCATGGTGATTGGCGGCGGTCGCGTTTATGAACAGTTCTTGCCAAAAGCGCAAAAACTGTATCTGACGCATATCGACGCAGAAGTGGAAGGCGACACCCATTTCCCGGATTACGAGCCGGATGACTGGGAATCGGTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAA", + "dna_sequence_length": 480, + "functions": [ + "dihydrofolate reductase" + ], + "id": "CDS_47", + "location": [ + [ + "NC_000913", + 49823, + "+", + 480 + ] + ], + "md5": "08f4e7905c474ffc6ad31cd54a3a76b3", + "parent_gene": "", + "protein_md5": "ce7c49af8b85e648e2e76cb6d1771f09", + "protein_translation": "MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000167" + ], + [ + "gene_synonym", + "ECK0050" + ], + [ + "gene_synonym", + "EcoGene:EG10048" + ], + [ + "gene_synonym", + "GI:16128043" + ], + [ + "gene_synonym", + "GeneID:944770" + ], + [ + "gene_synonym", + "JW0048" + ], + [ + "gene_synonym", + "NP_414591.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05637" + ], + [ + "gene_synonym", + "apaH" + ], + [ + "gene_synonym", + "b0049" + ], + [ + "gene_synonym", + "cfcB" + ] + ], + "dna_sequence": "ATGGCGACATACCTTATTGGCGACGTTCATGGTTGTTACGATGAACTGATCGCATTGCTGCATAAAGTAGAATTTACCCCTGGGAAAGATACCCTCTGGCTGACGGGCGATCTGGTCGCGCGCGGGCCGGGTTCGCTGGATGTTCTGCGCTATGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGCCGGGATCAGCCGCAATAAACCGAAAGATCGCCTGACACCGCTGCTGGAAGCGCCGGATGCCGACGAGCTGCTTAACTGGCTGCGGCGCCAGCCTCTGCTGCAAATCGACGAAGAGAAAAAGCTGGTGATGGCCCACGCAGGGATCACGCCGCAGTGGGATCTGCAGACCGCCAAAGAGTGCGCACGCGATGTAGAAGCGGTGCTATCGAGTGACTCCTATCCCTTCTTTCTTGATGCCATGTACGGCGATATGCCAAATAACTGGTCACCGGAATTGCGGGGGCTGGGAAGACTGCGTTTTATCACCAACGCTTTTACCCGTATGCGTTTTTGCTTCCCGAACGGTCAACTGGATATGTACAGCAAAGAATCGCCGGAAGAGGCCCCTGCCCCACTGAAACCGTGGTTTGCGATTCCTGGCCCTGTCGCTGAAGAATACAGCATCGCCTTTGGTCACTGGGCATCGCTGGAGGGCAAAGGTACGCCGGAAGGTATATACGCGCTGGATACCGGCTGCTGCTGGGGTGGTACATTAACCTGCCTGCGCTGGGAAGATAAACAGTATTTTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAA", + "dna_sequence_length": 843, + "functions": [ + "diadenosine tetraphosphatase" + ], + "id": "CDS_48", + "location": [ + [ + "NC_000913", + 51222, + "-", + 843 + ] + ], + "md5": "3539ea06aa18a15a838bc1aceb47d0c7", + "parent_gene": "", + "protein_md5": "0fc0ae6392796ac6c2286821ebe1190b", + "protein_translation": "MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGEAAAS", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000169" + ], + [ + "gene_synonym", + "ECK0051" + ], + [ + "gene_synonym", + "EcoGene:EG10047" + ], + [ + "gene_synonym", + "GI:16128044" + ], + [ + "gene_synonym", + "GeneID:944772" + ], + [ + "gene_synonym", + "JW0049" + ], + [ + "gene_synonym", + "NP_414592.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62672" + ], + [ + "gene_synonym", + "apaG" + ], + [ + "gene_synonym", + "b0050" + ], + [ + "gene_synonym", + "corD" + ], + [ + "gene_synonym", + "temP" + ] + ], + "dna_sequence": "ATGATCAATTCGCCCCGAGTGTGTATTCAGGTTCAAAGCGTCTACATTGAGGCTCAATCTTCACCTGATAATGAACGTTACGTTTTTGCTTATACCGTAACCATACGCAATCTGGGGCGAGCGCCAGTGCAGTTGTTGGGGCGTTACTGGCTGATCACCAATGGCAATGGCCGTGAAACCGAAGTCCAGGGCGAAGGAGTGGTTGGCGTCCAGCCACTTATCGCGCCTGGCGAAGAGTACCAGTACACCAGCGGTGCAATCATTGAAACCCCGCTGGGCACCATGCAGGGTCACTACGAAATGATCGATGAAAATGGCGTCCCTTTCAGCATCGACATTCCCGTATTCCGACTCGCCGTTCCCACACTCATTCATTAA", + "dna_sequence_length": 378, + "functions": [ + "protein associated with Co2+ and Mg2+ efflux" + ], + "id": "CDS_49", + "location": [ + [ + "NC_000913", + 51606, + "-", + 378 + ] + ], + "md5": "52ba273dd7d5ee02411bf9bd1cedd732", + "parent_gene": "", + "protein_md5": "10af8e029d2976e91ee59bcb09e86b15", + "protein_translation": "MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000175" + ], + [ + "gene_synonym", + "ECK0052" + ], + [ + "gene_synonym", + "EcoGene:EG10523" + ], + [ + "gene_synonym", + "GI:16128045" + ], + [ + "gene_synonym", + "GeneID:944939" + ], + [ + "gene_synonym", + "JW0050" + ], + [ + "gene_synonym", + "NP_414593.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06992" + ], + [ + "gene_synonym", + "b0051" + ], + [ + "gene_synonym", + "ksgA" + ], + [ + "gene_synonym", + "rsmA" + ] + ], + "dna_sequence": "ATGAATAATCGAGTCCACCAGGGCCACTTAGCCCGTAAACGCTTCGGGCAAAACTTTCTCAACGATCAGTTCGTGATCGACAGTATTGTGTCTGCCATTAACCCGCAAAAGGGCCAGGCGATGGTCGAAATCGGCCCCGGTCTGGCGGCATTGACCGAACCGGTCGGCGAACGTCTGGACCAGCTGACGGTCATCGAACTTGACCGCGATCTGGCGGCACGTCTGCAAACGCATCCATTCTTAGGCCCGAAACTGACGATTTATCAGCAGGATGCGATGACCTTTAACTTTGGTGAACTGGCCGAGAAAATGGGTCAGCCGCTGCGTGTTTTCGGCAACCTGCCTTATAACATCTCCACGCCGTTGATGTTCCATCTGTTTAGCTATACTGATGCCATTGCCGACATGCACTTTATGTTGCAAAAAGAGGTGGTGAATCGTCTGGTTGCAGGACCGAACAGCAAAGCGTATGGTCGATTAAGCGTCATGGCGCAATACTATTGCAATGTGATCCCGGTACTGGAAGTACCGCCGTCAGCCTTTACACCACCACCCAAAGTGGATTCCGCCGTCGTGCGCCTGGTTCCTCATGCAACGATGCCTCACCCGGTTAAAGATGTTCGTGTGTTGAGCCGCATCACCACCGAAGCCTTTAACCAGCGTCGTAAAACCATTCGTAACAGCCTCGGCAACCTGTTTAGCGTCGAGGTGTTAACGGGAATGGGGATCGACCCGGCGATGCGAGCGGAAAATATCTCTGTCGCGCAATATTGCCAGATGGCGAACTATCTGGCGGAGAACGCGCCTTTGCAGGAGAGTTAA", + "dna_sequence_length": 822, + "functions": [ + "16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent" + ], + "id": "CDS_50", + "location": [ + [ + "NC_000913", + 52430, + "-", + 822 + ] + ], + "md5": "cbae11c74e237e2c1ce7147e0d206d92", + "parent_gene": "", + "protein_md5": "2515d982c79f8d998293c1777b6b4314", + "protein_translation": "MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000178" + ], + [ + "gene_synonym", + "ECK0053" + ], + [ + "gene_synonym", + "EcoGene:EG10691" + ], + [ + "gene_synonym", + "GI:16128046" + ], + [ + "gene_synonym", + "GeneID:944919" + ], + [ + "gene_synonym", + "JW0051" + ], + [ + "gene_synonym", + "NP_414594.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19624" + ], + [ + "gene_synonym", + "b0052" + ], + [ + "gene_synonym", + "pdxA" + ] + ], + "dna_sequence": "ATGGTTAAAACCCAACGTGTTGTGATCACTCCCGGCGAGCCCGCCGGGATTGGCCCGGACTTAGTTGTCCAGCTTGCACAGCGTGAGTGGCCGGTCGAACTGGTTGTTTGTGCCGATGCCACTCTCCTTACCAACCGGGCAGCGATGCTCGGTTTGCCGCTCACCCTCCGCCCTTATTCCCCCAACTCCCCTGCACAACCGCAAACTGCGGGCACATTAACGCTACTTCCTGTCGCGCTACGTGCACCTGTCACTGCGGGGCAGTTAGCGGTTGAAAATGGGCATTATGTGGTGGAAACGCTGGCGCGAGCGTGCGATGGTTGTCTGAACGGCGAATTTGCCGCGCTGATCACAGGTCCGGTGCATAAAGGCGTTATTAACGACGCTGGCATTCCTTTTACCGGTCATACCGAGTTTTTCGAAGAGCGTTCGCAGGCGAAAAAGGTGGTGATGATGCTGGCGACCGAAGAACTTCGCGTGGCGCTGGCAACGACGCATTTACCGCTGCGCGATATCGCAGACGCTATCACCCCTGCACTTTTGCACGAAGTGATTGCTATTTTGCATCACGATTTGCGGACCAAATTTGGTATTGCCGAACCGCGCATTCTGGTCTGCGGGCTGAATCCGCACGCGGGCGAAGGCGGTCATATGGGTACGGAAGAGATAGACACCATTATTCCGGTGCTCAATGAGCTGCGGGCGCAGGGGATGAAACTCAACGGGCCGCTGCCTGCCGATACCCTGTTTCAGCCGAAATATCTTGATAACGCCGACGCCGTGCTGGCGATGTACCACGATCAGGGTCTTCCCGTGCTAAAATACCAGGGCTTCGGGCGCGGTGTGAACATTACGCTGGGCCTGCCCTTTATTCGCACATCAGTGGACCACGGCACCGCGCTTGAACTGGCGGGACGTGGCAAAGCCGATGTCGGCAGTTTTATTACGGCGCTTAATCTCGCCATCAAAATGATTGTTAACACCCAATGA", + "dna_sequence_length": 990, + "functions": [ + "4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent" + ], + "id": "CDS_51", + "location": [ + [ + "NC_000913", + 53416, + "-", + 990 + ] + ], + "md5": "92858dd38303c95a870b5738f34ab764", + "parent_gene": "", + "protein_md5": "1cfadfa6ee50881af75c0c606a5c991a", + "protein_translation": "MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000180" + ], + [ + "gene_synonym", + "ECK0054" + ], + [ + "gene_synonym", + "EcoGene:EG10985" + ], + [ + "gene_synonym", + "GI:16128047" + ], + [ + "gene_synonym", + "GeneID:944812" + ], + [ + "gene_synonym", + "JW0052" + ], + [ + "gene_synonym", + "NP_414595.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABZ6" + ], + [ + "gene_synonym", + "b0053" + ], + [ + "gene_synonym", + "surA" + ] + ], + "dna_sequence": "ATGAAGAACTGGAAAACGCTGCTTCTCGGTATCGCCATGATCGCGAATACCAGTTTCGCTGCCCCCCAGGTAGTCGATAAAGTCGCAGCCGTCGTCAATAACGGCGTCGTGCTGGAAAGCGACGTTGATGGATTAATGCAGTCGGTAAAACTGAACGCTGCTCAGGCAAGGCAGCAACTTCCTGATGACGCGACGCTGCGCCACCAAATCATGGAACGTTTGATCATGGATCAAATCATCCTGCAGATGGGGCAGAAAATGGGAGTGAAAATCTCCGATGAGCAGCTGGATCAGGCGATTGCTAACATCGCGAAACAGAACAACATGACGCTGGATCAGATGCGCAGCCGTCTGGCTTACGATGGACTGAACTACAACACCTATCGTAACCAGATCCGCAAAGAGATGATTATCTCTGAAGTGCGTAACAACGAGGTGCGTCGTCGCATCACCATCCTGCCGCAGGAAGTCGAATCCCTGGCGCAGCAGGTGGGTAACCAAAACGACGCCAGCACTGAGCTGAACCTGAGCCACATCCTGATCCCGCTGCCGGAAAACCCGACCTCTGATCAGGTGAACGAAGCGGAAAGCCAGGCGCGCGCCATTGTCGATCAGGCGCGTAACGGCGCTGATTTCGGTAAGCTGGCGATTGCTCATTCTGCCGACCAGCAGGCGCTGAACGGCGGCCAGATGGGCTGGGGCCGTATTCAGGAGTTGCCCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGCCATATTCTGCTGAAACCGTCGCCGATCATGACTGACGAACAGGCCCGTGTGAAACTGGAACAGATTGCTGCTGATATCAAGAGTGGTAAAACGACTTTTGCTGCCGCAGCGAAAGAGTTCTCTCAGGATCCAGGCTCTGCTAACCAGGGCGGCGATCTCGGCTGGGCTACACCAGATATTTTCGATCCGGCCTTCCGTGACGCCCTGACTCGCCTGAACAAAGGTCAAATGAGTGCACCGGTTCACTCTTCATTCGGCTGGCATTTAATCGAACTGCTGGATACCCGTAATGTCGATAAAACCGACGCTGCGCAGAAAGATCGTGCATACCGCATGCTGATGAACCGTAAGTTCTCGGAAGAAGCAGCAAGCTGGATGCAGGAACAACGTGCCAGCGCCTACGTTAAAATCCTGAGCAACTAA", + "dna_sequence_length": 1287, + "functions": [ + "peptidyl-prolyl cis-trans isomerase (PPIase)" + ], + "id": "CDS_52", + "location": [ + [ + "NC_000913", + 54702, + "-", + 1287 + ] + ], + "md5": "ae8d9d6ee5a237ef43e430bdd4428b46", + "parent_gene": "", + "protein_md5": "3279d575a3d10c30c51847f89440205b", + "protein_translation": "MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000183" + ], + [ + "gene_synonym", + "ECK0055" + ], + [ + "gene_synonym", + "EcoGene:EG11569" + ], + [ + "gene_synonym", + "GI:16128048" + ], + [ + "gene_synonym", + "GeneID:945011" + ], + [ + "gene_synonym", + "JW0053" + ], + [ + "gene_synonym", + "NP_414596.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31554" + ], + [ + "gene_synonym", + "b0054" + ], + [ + "gene_synonym", + "imp" + ], + [ + "gene_synonym", + "lptD" + ], + [ + "gene_synonym", + "ostA" + ], + [ + "gene_synonym", + "yabG" + ] + ], + "dna_sequence": "ATGAAAAAACGTATCCCCACTCTCCTGGCCACCATGATTGCCACCGCCCTTTATAGTCAACAGGGACTGGCAGCCGACCTCGCCTCACAGTGCATGTTGGGCGTGCCAAGCTATGACCGTCCTCTGGTACAGGGCGATACCAATGACTTACCCGTGACTATCAATGCTGACCACGCGAAAGGGGACTACCCGGATGACGCCGTGTTTACTGGCAGCGTGGATATCATGCAGGGTAACAGCCGTCTGCAGGCCGACGAAGTGCAGCTCCATCAAAAAGAGGCACCAGGACAACCGGAGCCGGTACGTACCGTTGATGCGCTCGGTAATGTCCATTACGACGATAACCAGGTGATCCTCAAAGGGCCGAAAGGCTGGGCGAATCTGAACACCAAAGATACCAACGTCTGGGAAGGTGATTACCAGATGGTGGGTCGCCAGGGTCGCGGTAAAGCGGACCTGATGAAACAACGTGGCGAAAACCGCTATACCATTCTGGATAACGGTAGCTTTACCTCCTGTCTGCCGGGTTCTGACACCTGGAGCGTGGTAGGTAGCGAAATTATTCATGACCGCGAAGAACAAGTTGCGGAGATCTGGAACGCCCGCTTTAAGGTGGGTCCGGTACCGATCTTTTATAGCCCCTATTTGCAGTTGCCGGTGGGTGACAAACGTCGCTCTGGTTTCTTGATCCCGAACGCCAAGTACACCACCACCAACTACTTTGAGTTCTACCTGCCATATTACTGGAACATCGCGCCAAATATGGATGCCACCATCACGCCGCATTATATGCATCGTCGTGGCAACATCATGTGGGAGAACGAATTCCGCTACCTCTCCCAGGCGGGCGCTGGCTTGATGGAACTGGACTATCTGCCTTCAGATAAAGTCTATGAAGATGAACACCCGAACGATGACAGTTCACGTCGTTGGTTATTCTACTGGAACCACTCCGGGGTCATGGATCAGGTGTGGCGTTTCAACGTCGACTACACCAAGGTCAGCGATCCTAGCTACTTCAATGATTTCGATAACAAGTACGGTTCCAGTACTGACGGCTACGCAACGCAAAAATTCAGCGTTGGCTATGCGGTGCAAAACTTCAATGCCACCGTTTCAACCAAGCAGTTCCAGGTTTTCAGCGAACAGAACACCAGTAGCTACTCGGCAGAGCCGCAGTTAGACGTTAATTACTACCAGAATGATGTTGGTCCGTTTGATACGCGTATTTACGGCCAGGCAGTGCACTTTGTTAACACCAGAGACGACATGCCTGAAGCAACCCGTGTTCACCTGGAACCGACCATCAATTTGCCGCTCTCTAATAACTGGGGCAGCATCAATACCGAAGCGAAGTTGCTGGCAACCCATTATCAGCAAACCAATCTTGACTGGTATAACTCCAGAAACACGACCAAGCTGGACGAATCCGTTAACCGCGTAATGCCGCAATTCAAAGTTGACGGCAAAATGGTCTTTGAACGCGATATGGAAATGCTGGCTCCGGGTTATACCCAAACGCTGGAACCGCGCGCGCAGTATTTGTACGTGCCGTATCGCGATCAGAGCGACATCTATAACTACGACTCGTCTCTGCTGCAATCTGACTACTCTGGCCTGTTCCGGGACCGGACTTACGGCGGTCTTGACCGTATTGCCTCCGCTAACCAGGTGACGACCGGTGTCACATCTCGCATATATGATGATGCTGCCGTTGAACGTTTTAATATTTCCGTTGGTCAAATCTACTATTTCACGGAGTCTCGCACTGGCGATGACAACATAACATGGGAGAATGACGACAAAACGGGTTCACTGGTGTGGGCAGGCGATACTTACTGGCGTATCTCCGAGCGTTGGGGATTGCGTGGCGGGATTCAGTACGATACACGTCTGGATAACGTAGCGACCAGTAACTCCAGCATTGAATACCGTCGGGATGAAGACCGTCTGGTACAGCTGAATTACCGTTACGCCAGCCCGGAATATATTCAGGCTACGCTGCCTAAGTACTATTCCACTGCTGAGCAATATAAGAATGGTATTTCGCAGGTAGGTGCTGTCGCCAGCTGGCCAATTGCCGATCGTTGGTCCATTGTTGGGGCCTACTACTACGACACCAATGCTAACAAGCAAGCCGACTCTATGTTAGGTGTGCAATACAGCTCCTGCTGCTATGCAATTCGCGTCGGTTACGAGCGGAAGCTGAACGGTTGGGATAACGATAAACAACATGCGGTATATGACAACGCAATCGGCTTTAACATCGAACTTCGCGGCCTGAGCTCCAACTACGGTCTGGGTACGCAAGAGATGCTGCGTTCGAACATTCTGCCGTATCAAAACACTTTGTGA", + "dna_sequence_length": 2355, + "functions": [ + "LPS assembly OM complex LptDE, beta-barrel component" + ], + "id": "CDS_53", + "location": [ + [ + "NC_000913", + 57109, + "-", + 2355 + ] + ], + "md5": "da01c65ba2a15c034e9f7e28391a7bf0", + "parent_gene": "", + "protein_md5": "b463754221f72713d04e1f23ce27c9cd", + "protein_translation": "MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL", + "protein_translation_length": 784, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000187" + ], + [ + "gene_synonym", + "ECK0056" + ], + [ + "gene_synonym", + "EcoGene:EG11570" + ], + [ + "gene_synonym", + "GI:16128049" + ], + [ + "gene_synonym", + "GeneID:948992" + ], + [ + "gene_synonym", + "JW0054" + ], + [ + "gene_synonym", + "NP_414597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31680" + ], + [ + "gene_synonym", + "b0055" + ], + [ + "gene_synonym", + "djlA" + ], + [ + "gene_synonym", + "yabH" + ] + ], + "dna_sequence": "ATGCAGTATTGGGGAAAAATCATTGGCGTGGCCGTGGCCTTACTGATGGGCGGCGGCTTTTGGGGCGTAGTGTTAGGCCTGTTAATTGGCCATATGTTTGATAAAGCCCGTAGCCGTAAAATGGCGTGGTTCGCCAACCAGCGTGAGCGTCAGGCGCTGTTTTTTGCCACCACTTTTGAAGTGATGGGGCATTTAACCAAATCCAAAGGTCGCGTCACGGAGGCTGATATTCATATCGCCAGCCAGTTGATGGACCGAATGAATCTTCATGGCGCTTCCCGTACTGCGGCGCAAAATGCGTTCCGGGTGGGAAAATCAGACAATTACCCGCTGCGCGAAAAGATGCGCCAGTTTCGCAGTGTCTGCTTTGGTCGTTTTGACTTAATTCGTATGTTTCTGGAGATCCAGATTCAGGCGGCGTTTGCTGATGGTTCACTGCACCCGAATGAACGGGCGGTGCTGTATGTCATTGCAGAAGAATTAGGGATCTCCCGCGCTCAGTTTGACCAGTTTTTGCGCATGATGCAGGGCGGTGCACAGTTTGGCGGCGGTTATCAGCAGCAAACTGGCGGTGGTAACTGGCAGCAAGCGCAGCGTGGCCCAACGCTGGAAGATGCCTGTAATGTGCTGGGCGTGAAGCCGACGGATGATGCGACCACCATCAAACGTGCCTACCGTAAGCTGATGAGTGAACACCATCCCGATAAGCTGGTGGCGAAAGGTTTGCCGCCTGAGATGATGGAGATGGCGAAGCAGAAAGCGCAGGAAATTCAGCAGGCATATGAGCTGATAAAGCAGCAGAAAGGGTTTAAATGA", + "dna_sequence_length": 816, + "functions": [ + "membrane-anchored DnaK co-chaperone, DNA-binding protein" + ], + "id": "CDS_54", + "location": [ + [ + "NC_000913", + 57364, + "+", + 816 + ] + ], + "md5": "04712b22796b98a09f4b58e7d06d03c9", + "parent_gene": "", + "protein_md5": "f7565c17b3101661253fed8ad4db8ecc", + "protein_translation": "MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000192" + ], + [ + "gene_synonym", + "ASAP:ABE-0000194" + ], + [ + "gene_synonym", + "ECK0057" + ], + [ + "gene_synonym", + "EcoGene:EG12610" + ], + [ + "gene_synonym", + "GeneID:944776" + ], + [ + "gene_synonym", + "JW0055" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39220" + ], + [ + "gene_synonym", + "b4659" + ], + [ + "gene_synonym", + "yabP" + ], + [ + "gene_synonym", + "yabQ" + ] + ], + "dna_sequence": "ATGAAAGTATCAGTTCCAGGCATGCCGGTTACACTTTTAAATATGAGCAAGAACGATATTTATAAGATGGTGAGCGGGGACAAGATGGACGTGAAGATGAATATCTTTCAACGCTTGTGGGAGACGTTACGCCATCTGTTCTGGTCAGATAAACAGACTGAGGCTTATAAACTTCTGTTCAATTTCGTGAATAACCAGACTGGCAACATCAACGCCTCAGAATACTTTACTGGGGCTATCAACGAGAATGAGAGAGAAAAGTTTATCAATAGCCTGGAATTATTCAATAAACTTAAAACATGCGCAAAAAATCCGGATGAGTTGGTCGCAAAGGGCAATATGCGCTGGGTCGCCCAGACCTTCGGGGATATCGAGTTAAGTGTCACTTTTTTCATTGAAAAGAATAAGATATGTACTCAGACGTTGCAGCTGCATAAGGGCCAAGGTAACTTGGGCGTTGATCTTAGAAAGGCTTACCTTCCCGGCGTTGACATGAGGGATTGTTACCTTGGTAAAAAAACAATGAAAGGTAGCAATGATATCCTTTATGAGAGACCTGGGTGGAATGCTAACCTGGGCCGTGCTACCCCGGACGGTGCTACCCCGGACGGTGCTAACCCGGACGGTGCTAACCTGGACGGTGCTACCGTGAACGGTGCTACCTCCTTATATGATGAGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAA", + "dna_sequence_length": 807, + "id": "CDS_55", + "location": [ + [ + "NC_000913", + 58474, + "+", + 579 + ], + [ + "NC_000913", + 59052, + "+", + 228 + ] + ], + "md5": "3fcb32319692c6079ea3bc34335f9e91", + "parent_gene": "", + "protein_md5": "b71018680a2134cfc6cb2e535222275e", + "protein_translation": "MKVSVPGMPVTLLNMSKNDIYKMVSGDKMDVKMNIFQRLWETLRHLFWSDKQTEAYKLLFNFVNNQTGNINASEYFTGAINENEREKFINSLELFNKLKTCAKNPDELVAKGNMRWVAQTFGDIELSVTFFIEKNKICTQTLQLHKGQGNLGVDLRKAYLPGVDMRDCYLGKKTMKGSNDILYERPGWNANLGRATPDGATPDGANPDGANLDGATVNGATSLYDEVIIINKIPPKKIDTKGVATEEVATKKVLLNKLLTTQLLNEPE", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000196" + ], + [ + "gene_synonym", + "ECK0059" + ], + [ + "gene_synonym", + "EcoGene:EG12609" + ], + [ + "gene_synonym", + "GI:16128052" + ], + [ + "gene_synonym", + "GeneID:946262" + ], + [ + "gene_synonym", + "JW0057" + ], + [ + "gene_synonym", + "NP_414600.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA37" + ], + [ + "gene_synonym", + "b0058" + ], + [ + "gene_synonym", + "rluA" + ], + [ + "gene_synonym", + "yabO" + ] + ], + "dna_sequence": "ATGGGGATGGAAAACTACAATCCACCGCAGGAACCCTGGTTGGTTATCCTGTATCAGGATGACCATATTATGGTGGTCAACAAGCCGAGCGGTTTGTTGTCAGTGCCGGGTCGTCTGGAAGAGCACAAAGACAGCGTGATGACGCGCATTCAGCGTGATTATCCGCAGGCAGAATCGGTGCATCGTCTGGATATGGCTACCAGCGGCGTGATTGTAGTGGCGCTGACCAAAGCCGCGGAGCGGGAGTTAAAACGCCAGTTCCGCGAGCGCGAGCCGAAAAAGCAGTATGTGGCCCGCGTCTGGGGGCATCCATCCCCCGCAGAAGGTCTGGTGGATCTGCCGCTGATTTGCGACTGGCCAAACCGCCCGAAACAGAAAGTCTGTTACGAAACGGGTAAACCTGCGCAGACGGAATATGAAGTGGTGGAGTATGCGGCGGATAACACGGCAAGAGTGGTGTTAAAACCGATTACCGGGCGTTCGCATCAATTGCGTGTGCATATGCTGGCGCTGGGTCATCCGATTCTCGGCGATCGTTTTTATGCATCACCAGAAGCGAGAGCGATGGCACCACGTTTGTTGCTACATGCAGAGATGTTGACGATTACCCATCCGGCGTATGGCAATAGTATGACGTTTAAAGCGCCAGCGGATTTTTAA", + "dna_sequence_length": 660, + "functions": [ + "dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent" + ], + "id": "CDS_56", + "location": [ + [ + "NC_000913", + 60346, + "-", + 660 + ] + ], + "md5": "884b8f548dcc37564b06b5154e58cca4", + "parent_gene": "", + "protein_md5": "0de6f5d10286a29a72ae672024d23f37", + "protein_translation": "MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000198" + ], + [ + "gene_synonym", + "ECK0060" + ], + [ + "gene_synonym", + "EcoGene:EG11083" + ], + [ + "gene_synonym", + "GI:16128053" + ], + [ + "gene_synonym", + "GeneID:948523" + ], + [ + "gene_synonym", + "JW0058" + ], + [ + "gene_synonym", + "NP_414601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60240" + ], + [ + "gene_synonym", + "b0059" + ], + [ + "gene_synonym", + "hepA" + ], + [ + "gene_synonym", + "rapA" + ], + [ + "gene_synonym", + "yabA" + ] + ], + "dna_sequence": "ATGCCTTTTACACTTGGTCAACGCTGGATCAGCGATACAGAAAGCGAATTGGGACTTGGAACCGTTGTCGCGGTGGATGCGCGAACTGTCACTTTACTTTTCCCATCTACTGGTGAAAACCGTCTGTACGCACGCAGTGATTCCCCCGTGACCCGCGTGATGTTCAACCCTGGTGATACCATTACCAGCCATGACGGCTGGCAGATGCAAGTCGAAGAAGTAAAAGAAGAAAATGGCTTGCTGACCTATATCGGTACTCGCCTGGATACTGAAGAGTCCGGCGTAGCCCTGCGTGAAGTTTTCCTTGATAGCAAACTGGTGTTCAGCAAACCGCAGGACCGTCTGTTTGCCGGGCAGATTGACCGTATGGACCGCTTTGCGCTGCGTTATCGCGCGCGTAAATATTCCAGCGAACAGTTCCGTATGCCGTACAGCGGCCTGCGCGGTCAGCGTACCAGCCTGATCCCGCATCAGCTCAACATCGCTCATGATGTTGGTCGCCGCCACGCGCCGCGCGTCCTGCTGGCTGACGAAGTGGGTTTAGGGAAAACCATTGAAGCCGGGATGATCCTGCATCAGCAACTGCTCTCTGGCGCTGCTGAACGTGTGCTAATTATCGTCCCGGAAACCTTACAGCATCAGTGGCTGGTAGAAATGCTGCGCCGTTTCAACCTGCGCTTTGCGCTATTTGATGATGAGCGTTATGCCGAAGCTCAGCACGATGCTTACAACCCGTTTGACACCGAACAGCTGGTGATTTGCTCGCTGGATTTTGCCCGTCGTAGCAAACAGCGCCTGGAACATCTCTGTGAAGCCGAATGGGACCTGCTGGTGGTCGATGAAGCGCATCACCTGGTGTGGAGCGAAGATGCGCCAAGCCGTGAATATCAGGCCATTGAACAACTGGCAGAGCACGTGCCGGGCGTTCTGCTGCTGACCGCGACCCCGGAACAGCTGGGGATGGAAAGCCACTTCGCCCGTCTGCGTCTGCTGGACCCGAACCGTTTCCACGATTTTGCGCAGTTCGTTGAAGAGCAGAAAAATTATCGTCCGGTTGCGGACGCCGTTGCCATGCTGCTGGCAGGTAACAAACTGAGCAATGACGAACTGAACATGCTCGGCGAGATGATCGGCGAGCAGGATATCGAGCCGCTGTTGCAGGCAGCAAACAGCGACAGCGAAGATGCCCAGAGCGCCCGTCAGGAGCTGGTTTCGATGCTGATGGATCGCCACGGCACCAGCCGCGTGCTGTTCCGTAACACGCGTAACGGTGTGAAAGGATTCCCGAAACGCGAGCTGCACACCATTAAGCTGCCGCTACCGACGCAGTATCAGACGGCTATTAAAGTCTCCGGCATTATGGGCGCACGTAAAAGTGCGGAAGATCGTGCTCGCGATATGCTCTACCCGGAGCGTATTTATCAGGAATTTGAAGGTGATAACGCCACCTGGTGGAACTTCGATCCGCGCGTTGAGTGGCTGATGGGCTACCTGACCAGCCATCGCTCTCAGAAAGTGCTGGTGATCTGCGCCAAAGCTGCCACTGCGCTGCAACTGGAGCAGGTACTGCGCGAACGTGAAGGTATTCGCGCTGCGGTGTTCCACGAAGGTATGTCGATTATCGAACGTGACCGCGCTGCCGCCTGGTTTGCCGAAGAAGACACCGGCGCACAGGTACTGCTGTGCTCAGAAATCGGTTCTGAAGGACGTAACTTCCAGTTCGCCAGCCACATGGTGATGTTTGACCTGCCATTCAACCCGGATCTACTGGAGCAGCGTATTGGTCGTCTGGATCGTATCGGCCAGGCGCACGATATTCAGATCCATGTGCCTTATCTGGAGAAAACCGCTCAGTCGGTGCTGGTGCGCTGGTATCACGAAGGTCTGGATGCATTTGAGCACACCTGCCCGACCGGACGCACTATTTACGATAGCGTATACAACGATCTGATTAACTATCTGGCTTCACCGGATCAAACCGAAGGCTTTGACGATCTGATCAAAAACTGCCGCGAGCAACATGAAGCGCTGAAAGCACAGCTGGAACAGGGTCGTGACCGCCTGCTGGAAATCCACTCCAACGGTGGCGAAAAAGCCCAGGCACTGGCAGAAAGCATTGAAGAGCAGGATGACGATACCAACCTGATCGCCTTCGCCATGAACCTGTTCGATATTATCGGTATCAATCAGGACGATCGCGGCGACAACATGATCGTGCTGACGCCGTCCGATCATATGCTGGTGCCGGACTTCCCTGGCCTGTCGGAAGATGGCATCACCATCACCTTTGATCGTGAAGTGGCGCTGGCGCGTGAAGATGCACAGTTTATTACCTGGGAGCATCCGCTGATCCGCAACGGTCTGGATCTGATCCTTTCTGGCGATACCGGTAGCAGCACGATTTCACTGTTAAAAAACAAAGCGTTGCCGGTAGGTACGCTGTTGGTGGAACTGATTTATGTGGTTGAAGCCCAGGCTCCGAAGCAGTTGCAGCTCAACCGCTTCCTGCCACCGACGCCGGTACGTATGCTGCTGGATAAAAACGGCAACAACCTGGCGGCGCAGGTAGAGTTTGAAACCTTTAACCGCCAGCTTAACGCGGTTAACCGTCACACCGGCAGCAAACTGGTTAACGCCGTGCAGCAGGATGTTCACGCTATCCTTCAACTGGGTGAAGCGCAGATCGAGAAATCTGCCCGTGCATTGATTGATGCAGCGCGTAACGAAGCCGACGAAAAACTGTCTGCCGAGCTGTCTCGTCTGGAAGCTCTGCGTGCAGTGAACCCGAACATTCGTGACGACGAACTGACCGCCATTGAGAGCAACCGTCAGCAGGTAATGGAAAGCCTGGATCAGGCAGGTTGGCGTCTGGATGCCCTGCGTTTGATCGTTGTAACGCATCAGTAA", + "dna_sequence_length": 2907, + "functions": [ + "RNA polymerase remodeling/recycling factor ATPase", + "RNA polymerase-associated, ATP-dependent RNA translocase" + ], + "id": "CDS_57", + "location": [ + [ + "NC_000913", + 63264, + "-", + 2907 + ] + ], + "md5": "a9eae956a6179272d28093c54026de87", + "parent_gene": "", + "protein_md5": "1c7cff5567c19190aa0e69381c500868", + "protein_translation": "MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ", + "protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000202" + ], + [ + "gene_synonym", + "ECK0061" + ], + [ + "gene_synonym", + "EcoGene:EG10747" + ], + [ + "gene_synonym", + "GI:16128054" + ], + [ + "gene_synonym", + "GeneID:944779" + ], + [ + "gene_synonym", + "JW0059" + ], + [ + "gene_synonym", + "NP_414602.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21189" + ], + [ + "gene_synonym", + "b0060" + ], + [ + "gene_synonym", + "dinA" + ], + [ + "gene_synonym", + "polB" + ] + ], + "dna_sequence": "GTGGCGCAGGCAGGTTTTATCTTAACCCGACACTGGCGGGACACCCCGCAAGGGACAGAAGTCTCCTTCTGGCTGGCGACGGACAACGGGCCGTTGCAGGTTACGCTTGCACCGCAAGAGTCCGTGGCGTTTATTCCCGCCGATCAGGTTCCCCGCGCTCAGCATATTTTGCAGGGTGAACAAGGCTTTCGCCTGACACCGCTGGCGTTAAAGGATTTTCACCGCCAGCCGGTGTATGGCCTTTACTGTCGCGCCCATCGCCAATTGATGAATTACGAAAAGCGCCTGCGTGAAGGTGGCGTTACCGTCTACGAGGCCGATGTGCGTCCGCCAGAACGCTATCTGATGGAGCGGTTTATCACCTCACCGGTGTGGGTCGAGGGTGATATGCACAATGGCACTATCGTTAATGCCCGTCTGAAACCGCATCCCGACTATCGTCCGCCGCTCAAGTGGGTTTCTATAGATATTGAAACCACCCGCCACGGTGAGCTGTACTGCATCGGCCTGGAAGGCTGCGGGCAGCGCATCGTTTATATGCTGGGGCCGGAGAATGGCGACGCCTCCTCGCTTGATTTCGAACTGGAATACGTCGCCAGCCGCCCGCAGTTGCTGGAAAAACTCAACGCCTGGTTTGCCAACTACGATCCTGATGTGATCATCGGTTGGAACGTGGTGCAGTTCGATCTGCGAATGCTGCAAAAACATGCCGAGCGTTACCGTCTTCCGCTGCGTCTTGGGCGCGATAATAGCGAGCTGGAGTGGCGCGAGCACGGCTTTAAAAACGGCGTCTTTTTTGCCCAGGCTAAAGGTCGGCTAATTATCGACGGTATCGAGGCGCTGAAATCCGCGTTCTGGAATTTCTCTTCATTCTCGCTGGAAACTGTCGCTCAGGAGCTATTAGGCGAAGGAAAATCTATCGATAACCCGTGGGATCGAATGGACGAAATTGACCGCCGTTTCGCCGAAGATAAACCTGCGCTGGCAACTTATAACCTGAAAGATTGCGAGCTGGTGACGCAGATCTTCCACAAAACTGAAATCATGCCATTTTTACTCGAACGGGCAACGGTGAACGGCCTGCCGGTGGACCGACACGGCGGTTCGGTGGCGGCATTTGGTCATCTCTATTTTCCGCGAATGCATCGCGCTGGTTATGTCGCGCCTAATCTCGGCGAAGTGCCGCCGCACGCCAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGTACCCGTCGATCATCCGCACCTTTCTGATTGATCCCGTCGGGCTGGTGGAAGGCATGGCGCAGCCTGATCCAGAGCACAGTACCGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGATTGTGACTAACATCTGGCACGGGCGCGATGAAGCCAAACGCCAGGGTAACAAACCGCTGTCGCAGGCGCTGAAAATCATCATGAATGCCTTTTATGGCGTGCTCGGCACCACCGCCTGCCGCTTCTTCGATCCGCGGCTGGCATCGTCGATCACCATGCGTGGTCATCAGATCATGCGGCAAACCAAAGCGTTGATTGAAGCACAGGGCTACGACGTTATCTACGGCGATACCGACTCAACGTTTGTCTGGCTGAAAGGCGCACATTCGGAAGAAGAAGCGGCGAAAATCGGTCGTGCACTGGTGCAGCACGTTAACGCCTGGTGGGCGGAAACGCTGCAAAAACAACGGCTGACCAGCGCATTAGAACTGGAGTATGAAACCCATTTCTGCCGTTTTCTGATGCCAACCATTCGCGGAGCCGATACCGGCAGTAAAAAGCGTTATGCCGGACTGATTCAGGAGGGCGACAAGCAGCGGATGGTGTTTAAAGGGCTGGAAACCGTGCGCACCGACTGGACGCCGCTGGCCCAGCAGTTTCAGCAGGAGCTATACCTGCGCATCTTCCGCAACGAGCCATATCAGGAATATGTACGCGAAACCATCGACAAACTGATGGCGGGTGAACTGGATGCGCGACTGGTTTACCGTAAACGCCTTCGCCGTCCGCTGAGCGAGTATCAGCGTAATGTGCCGCCTCATGTACGCGCCGCTCGCCTTGCCGATGAAGAAAACCAAAAGCGTGGTCGCCCCTTGCAATATCAGAATCGCGGCACCATTAAGTACGTATGGACCACCAACGGCCCGGAGCCGCTGGACTACCAACGTTCACCACTGGATTACGAACACTATCTGACCCGCCAGCTACAACCCGTGGCGGAGGGAATACTCCCTTTTATTGAGGATAATTTTGCTACACTTATGACCGGGCAACTTGGGCTATTTTGA", + "dna_sequence_length": 2352, + "functions": [ + "DNA polymerase II" + ], + "id": "CDS_58", + "location": [ + [ + "NC_000913", + 65780, + "-", + 2352 + ] + ], + "md5": "0414c1277b6522e9c93a1d1124c1b35d", + "parent_gene": "", + "protein_md5": "9debf28c696e3e5f09e76693104c59bf", + "protein_translation": "MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF", + "protein_translation_length": 783, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000209" + ], + [ + "gene_synonym", + "ECK0062" + ], + [ + "gene_synonym", + "EcoGene:EG10055" + ], + [ + "gene_synonym", + "GI:16128055" + ], + [ + "gene_synonym", + "GeneID:945294" + ], + [ + "gene_synonym", + "JW0060" + ], + [ + "gene_synonym", + "NP_414603.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08203" + ], + [ + "gene_synonym", + "araD" + ], + [ + "gene_synonym", + "b0061" + ] + ], + "dna_sequence": "ATGTTAGAAGATCTCAAACGCCAGGTATTAGAAGCCAACCTGGCGCTGCCAAAACACAACCTGGTCACGCTCACATGGGGCAACGTCAGCGCCGTTGATCGCGAGCGCGGCGTCTTTGTGATCAAACCTTCCGGCGTCGATTACAGCGTCATGACCGCTGACGATATGGTCGTGGTTAGCATCGAAACCGGTGAAGTGGTTGAAGGTACGAAAAAGCCCTCCTCCGACACGCCAACTCACCGGCTGCTCTATCAGGCATTCCCCTCCATTGGCGGCATTGTGCATACGCACTCGCGCCACGCCACCATCTGGGCGCAGGCGGGTCAGTCGATTCCAGCAACCGGCACCACCCACGCCGACTATTTCTACGGCACCATTCCCTGCACCCGCAAAATGACCGACGCAGAAATCAACGGCGAATATGAGTGGGAAACCGGTAACGTCATCGTAGAAACCTTTGAAAAACAGGGTATCGATGCAGCGCAAATGCCCGGCGTTCTGGTCCATTCCCACGGCCCGTTTGCATGGGGCAAAAATGCCGAAGATGCGGTGCATAACGCCATCGTGCTGGAAGAGGTCGCTTATATGGGGATATTCTGCCGTCAGTTAGCGCCGCAGTTACCGGATATGCAGCAAACGCTGCTGGATAAACACTATCTGCGTAAGCATGGCGCGAAGGCATATTACGGGCAGTAA", + "dna_sequence_length": 696, + "functions": [ + "L-ribulose-5-phosphate 4-epimerase" + ], + "id": "CDS_59", + "location": [ + [ + "NC_000913", + 66550, + "-", + 696 + ] + ], + "md5": "b952e0abbf58e03aaa3b308e34530868", + "parent_gene": "", + "protein_md5": "aa2874f655af5247e303666bed22cea2", + "protein_translation": "MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000221" + ], + [ + "gene_synonym", + "ECK0063" + ], + [ + "gene_synonym", + "EcoGene:EG10052" + ], + [ + "gene_synonym", + "GI:16128056" + ], + [ + "gene_synonym", + "GeneID:947511" + ], + [ + "gene_synonym", + "JW0061" + ], + [ + "gene_synonym", + "NP_414604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08202" + ], + [ + "gene_synonym", + "araA" + ], + [ + "gene_synonym", + "b0062" + ] + ], + "dna_sequence": "ATGACGATTTTTGATAATTATGAAGTGTGGTTTGTCATTGGCAGCCAGCATCTGTATGGCCCGGAAACCCTGCGTCAGGTCACCCAACATGCCGAGCACGTCGTTAATGCGCTGAATACGGAAGCGAAACTGCCCTGCAAACTGGTGTTGAAACCGCTGGGCACCACGCCGGATGAAATCACCGCTATTTGCCGCGACGCGAATTACGACGATCGTTGCGCTGGTCTGGTGGTGTGGCTGCACACCTTCTCCCCGGCCAAAATGTGGATCAACGGCCTGACCATGCTCAACAAACCGTTGCTGCAATTCCACACCCAGTTCAACGCGGCGCTGCCGTGGGACAGTATCGATATGGACTTTATGAACCTGAACCAGACTGCACATGGCGGTCGCGAGTTCGGCTTCATTGGCGCGCGTATGCGTCAGCAACATGCCGTGGTTACCGGTCACTGGCAGGATAAACAAGCCCATGAGCGTATCGGCTCCTGGATGCGTCAGGCGGTCTCTAAACAGGATACCCGTCATCTGAAAGTCTGCCGATTTGGCGATAACATGCGTGAAGTGGCGGTCACCGATGGCGATAAAGTTGCCGCACAGATCAAGTTCGGTTTCTCCGTCAATACCTGGGCGGTTGGCGATCTGGTGCAGGTGGTGAACTCCATCAGCGACGGCGATGTTAACGCGCTGGTCGATGAGTACGAAAGCTGCTACACCATGACGCCTGCCACACAAATCCACGGCAAAAAACGACAGAACGTGCTGGAAGCGGCGCGTATTGAGCTGGGGATGAAGCGTTTCCTGGAACAAGGTGGCTTCCACGCGTTCACCACCACCTTTGAAGATTTGCACGGTCTGAAACAGCTTCCTGGTCTGGCCGTACAGCGTCTGATGCAGCAGGGTTACGGCTTTGCGGGCGAAGGCGACTGGAAAACTGCCGCCCTGCTTCGCATCATGAAGGTGATGTCAACCGGTCTGCAGGGCGGCACCTCCTTTATGGAGGACTACACCTATCACTTCGAGAAAGGTAATGACCTGGTGCTCGGCTCCCATATGCTGGAAGTCTGCCCGTCGATCGCCGCAGAAGAGAAACCGATCCTCGACGTTCAGCATCTCGGTATTGGTGGTAAGGACGATCCTGCCCGCCTGATCTTCAATACCCAAACCGGCCCAGCGATTGTCGCCAGCTTGATTGATCTCGGCGATCGTTACCGTCTACTGGTTAACTGCATCGACACGGTGAAAACACCGCACTCCCTGCCGAAACTGCCGGTGGCGAATGCGCTGTGGAAAGCGCAACCGGATCTGCCAACTGCTTCCGAAGCGTGGATCCTCGCTGGTGGCGCGCACCATACCGTCTTCAGCCATGCACTGAACCTCAACGATATGCGCCAATTCGCCGAGATGCACGACATTGAAATCACGGTGATTGATAACGACACACGCCTGCCAGCGTTTAAAGACGCGCTGCGCTGGAACGAAGTGTATTACGGGTTTCGTCGCTAA", + "dna_sequence_length": 1503, + "functions": [ + "L-arabinose isomerase" + ], + "id": "CDS_60", + "location": [ + [ + "NC_000913", + 68337, + "-", + 1503 + ] + ], + "md5": "6d69b48b82c9b2ebfc7f9de97959597d", + "parent_gene": "", + "protein_md5": "d10df6959beed111ac1348858e76d3ae", + "protein_translation": "MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000223" + ], + [ + "gene_synonym", + "ECK0064" + ], + [ + "gene_synonym", + "EcoGene:EG10053" + ], + [ + "gene_synonym", + "GI:16128057" + ], + [ + "gene_synonym", + "GeneID:946017" + ], + [ + "gene_synonym", + "JW0062" + ], + [ + "gene_synonym", + "NP_414605.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08204" + ], + [ + "gene_synonym", + "araB" + ], + [ + "gene_synonym", + "b0063" + ] + ], + "dna_sequence": "ATGGCGATTGCAATTGGCCTCGATTTTGGCAGTGATTCTGTGCGAGCTTTGGCGGTGGACTGCGCTACCGGTGAAGAGATCGCCACCAGCGTAGAGTGGTATCCCCGTTGGCAGAAAGGGCAATTTTGTGATGCCCCGAATAACCAGTTCCGTCATCATCCGCGTGACTACATTGAGTCAATGGAAGCGGCACTGAAAACCGTGCTTGCAGAGCTTAGCGTCGAACAGCGCGCAGCTGTGGTCGGGATTGGCGTTGACAGTACCGGCTCGACGCCCGCACCGATTGATGCCGACGGAAACGTGCTGGCGCTGCGCCCGGAGTTTGCCGAAAACCCGAACGCGATGTTCGTATTGTGGAAAGACCACACTGCGGTTGAAGAAGCGGAAGAGATTACCCGTTTGTGCCACGCGCCGGGCAACGTTGACTACTCCCGCTACATTGGTGGTATTTATTCCAGCGAATGGTTCTGGGCAAAAATCCTGCATGTGACTCGCCAGGACAGCGCCGTGGCGCAATCTGCCGCATCGTGGATTGAGCTGTGCGACTGGGTGCCAGCTCTGCTTTCCGGTACCACCCGCCCGCAGGATATTCGTCGCGGACGTTGCAGCGCCGGGCATAAATCTCTGTGGCACGAAAGCTGGGGCGGCCTGCCGCCAGCCAGTTTCTTTGATGAGCTGGACCCGATCCTCAATCGCCATTTGCCTTCCCCGCTGTTCACTGACACTTGGACTGCCGATATTCCGGTGGGCACCTTATGCCCGGAATGGGCGCAGCGTCTCGGCCTGCCTGAAAGCGTGGTGATTTCCGGCGGCGCGTTTGACTGCCATATGGGCGCAGTTGGCGCAGGCGCACAGCCTAACGCACTGGTAAAAGTTATCGGTACTTCCACCTGCGACATTCTGATTGCCGACAAACAGAGCGTTGGCGAGCGGGCAGTTAAAGGTATTTGCGGTCAGGTTGATGGCAGCGTGGTGCCTGGATTTATCGGTCTGGAAGCAGGCCAATCGGCGTTTGGTGATATCTACGCCTGGTTTGGTCGCGTACTCGGCTGGCCGCTGGAACAGCTTGCCGCCCAGCATCCGGAACTGAAAACGCAAATCAACGCCAGCCAGAAACAACTGCTTCCGGCGCTGACCGAAGCATGGGCCAAAAATCCGTCTCTGGATCACCTGCCGGTGGTGCTCGACTGGTTTAACGGCCGCCGCACACCGAACGCTAACCAACGCCTGAAAGGGGTGATTACCGATCTTAACCTCGCTACCGACGCTCCGCTGCTGTTCGGCGGTTTGATTGCTGCCACCGCCTTTGGCGCACGCGCAATCATGGAGTGCTTTACCGATCAGGGGATCGCCGTTAATAACGTGATGGCACTGGGCGGCATCGCGCGGAAAAACCAGGTCATTATGCAGGCCTGCTGCGACGTGCTGAATCGCCCGCTGCAAATTGTTGCCTCTGACCAGTGCTGTGCGCTCGGTGCGGCGATTTTTGCTGCCGTCGCCGCGAAAGTGCACGCAGACATCCCATCAGCTCAGCAAAAAATGGCCAGTGCGGTAGAGAAAACCCTGCAACCGTGCAGCGAGCAGGCACAACGCTTTGAACAGCTTTATCGCCGCTATCAGCAATGGGCGATGAGCGCCGAACAACACTATCTTCCAACTTCCGCCCCGGCACAGGCTGCCCAGGCCGTTGCGACTCTATAA", + "dna_sequence_length": 1701, + "functions": [ + "L-ribulokinase" + ], + "id": "CDS_61", + "location": [ + [ + "NC_000913", + 70048, + "-", + 1701 + ] + ], + "md5": "b98bcedac009dea57897d14145065c6a", + "parent_gene": "", + "protein_md5": "4b33d67a267b14f04ea898f6d58ceccc", + "protein_translation": "MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKTQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL", + "protein_translation_length": 566, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000236" + ], + [ + "gene_synonym", + "ECK0065" + ], + [ + "gene_synonym", + "EcoGene:EG10054" + ], + [ + "gene_synonym", + "GI:16128058" + ], + [ + "gene_synonym", + "GeneID:944780" + ], + [ + "gene_synonym", + "JW0063" + ], + [ + "gene_synonym", + "NP_414606.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9E0" + ], + [ + "gene_synonym", + "araC" + ], + [ + "gene_synonym", + "b0064" + ] + ], + "dna_sequence": "ATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAATGGTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCTACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAA", + "dna_sequence_length": 879, + "functions": [ + "ara regulon transcriptional activator", + "autorepressor" + ], + "id": "CDS_62", + "location": [ + [ + "NC_000913", + 70387, + "+", + 879 + ] + ], + "md5": "d65d4b4c69ea9938089bbe9685e3762e", + "parent_gene": "", + "protein_md5": "83ca0f6b434d115c2d3a74bfc12a9eda", + "protein_translation": "MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000241" + ], + [ + "gene_synonym", + "ECK0066" + ], + [ + "gene_synonym", + "EcoGene:EG11571" + ], + [ + "gene_synonym", + "GI:16128059" + ], + [ + "gene_synonym", + "GeneID:944783" + ], + [ + "gene_synonym", + "JW5005" + ], + [ + "gene_synonym", + "NP_414607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30149" + ], + [ + "gene_synonym", + "b0065" + ], + [ + "gene_synonym", + "yabI" + ] + ], + "dna_sequence": "ATGCAAGCATTGCTGGAACACTTTATTACCCAATCCACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTATTGGCTGCTTGATGGGCGACTGGATTTCTTTCTGGCTGGGTTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCACTACTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTGCCGGAATGCAGAGCGGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAG", + "dna_sequence_length": 765, + "functions": [ + "DedA family inner membrane protein" + ], + "id": "CDS_63", + "location": [ + [ + "NC_000913", + 71351, + "+", + 765 + ] + ], + "md5": "ab7eeb94c0fd7f42b08193b91561c130", + "parent_gene": "", + "protein_md5": "7bdc1bf59644bfb4c77a35bb5838b41b", + "protein_translation": "MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000244" + ], + [ + "gene_synonym", + "ECK0067" + ], + [ + "gene_synonym", + "EcoGene:EG11572" + ], + [ + "gene_synonym", + "GI:16128060" + ], + [ + "gene_synonym", + "GeneID:944785" + ], + [ + "gene_synonym", + "JW0065" + ], + [ + "gene_synonym", + "NP_414608.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31548" + ], + [ + "gene_synonym", + "b0066" + ], + [ + "gene_synonym", + "sfuC" + ], + [ + "gene_synonym", + "thiQ" + ], + [ + "gene_synonym", + "yabJ" + ] + ], + "dna_sequence": "ATGTTAAAACTGACTGATATCACCTGGCTTTACCACCATTTGCCGATGCGTTTTAGCTTAACGGTGGAACGCGGCGAGCAGGTGGCGATCCTCGGGCCAAGCGGCGCGGGTAAAAGTACCCTGCTGAATTTGATCGCCGGTTTTCTGACGCCAGCCAGCGGTTCGCTGACTATCGATGGCGTAGATCACACAACTATGCCGCCGTCACGCCGTCCGGTGTCGATGCTGTTTCAGGAGAACAACCTGTTCAGCCACCTGACGGTCGCACAGAACATCGGGCTGGGGCTAAATCCGGGATTGAAACTGAACGCGGTACAGCAGGGGAAAATGCACGCTATCGCCCGCCAGATGGGGATTGATAATTTAATGGCGCGGTTACCGGGCGAGCTTTCCGGCGGTCAGCGACAGCGAGTGGCGTTAGCGCGTTGTCTGGTACGCGAACAGCCGATTTTATTGCTCGATGAACCGTTCTCTGCGCTCGATCCGGCGTTACGTCAGGAGATGTTGACGCTGGTGAGCACGAGCTGCCAGCAGCAAAAAATGACGCTATTGATGGTGTCGCACAGCGTGGAAGATGCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAG", + "dna_sequence_length": 699, + "functions": [ + "thiamine/thiamine pyrophosphate ABC transporter ATPase" + ], + "id": "CDS_64", + "location": [ + [ + "NC_000913", + 72927, + "-", + 699 + ] + ], + "md5": "b0af869907529651c86d6e26535d0c9e", + "parent_gene": "", + "protein_md5": "06c9588bcc6976883e1948953189ed41", + "protein_translation": "MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKASASALLGITG", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000246" + ], + [ + "gene_synonym", + "ECK0068" + ], + [ + "gene_synonym", + "EcoGene:EG11573" + ], + [ + "gene_synonym", + "GI:16128061" + ], + [ + "gene_synonym", + "GeneID:944784" + ], + [ + "gene_synonym", + "JW0066" + ], + [ + "gene_synonym", + "NP_414609.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31549" + ], + [ + "gene_synonym", + "b0067" + ], + [ + "gene_synonym", + "sfuB" + ], + [ + "gene_synonym", + "thiP" + ], + [ + "gene_synonym", + "yabK" + ] + ], + "dna_sequence": "ATGGCAACGCGCCGTCAGCCGTTAATTCCCGGCTGGTTAATTCCAGGTGTAAGCGCCACCACGCTGGTGGTAGCGGTTGCGCTGGCGGCGTTTCTCGCCCTGTGGTGGAACGCGCCGCAGGATGACTGGGTGGCAGTCTGGCAGGACAGCTATCTGTGGCATGTGGTGCGCTTCTCCTTCTGGCAGGCGTTTCTCTCGGCACTGCTCTCTGTCATACCCGCGATATTCCTCGCCCGCGCGCTCTATCGCAGGCGCTTTCCGGGTCGGCTGGCGCTGTTGCGTCTGTGTGCAATGACCTTGATCCTCCCGGTGTTGGTCGCTGTTTTCGGCATTCTTAGCGTCTATGGTCGCCAGGGCTGGCTGGCAACACTCTGCCAATCGCTCGGTCTGGAGTGGACCTTTTCGCCCTACGGCCTGCAAGGTATTTTGCTGGCCCATGTGTTTTTTAATCTGCCGATGGCGAGCCGCTTATTACTCCAGGCACTGGAAAACATCCCCGGCGAACAGCGTCAACTTGCCGCCCAGCTTGGGATGCGTAGCTGGCATTTTTTCCGCTTCGTCGAATGGCCGTGGTTACGGCGACAAATCCCGCCGGTTGCTGCGCTTATCTTTATGCTCTGTTTCGCCAGCTTCGCCACCGTGCTATCGCTGGGGGGCGGTCCGCAGGCGACCACTATCGAGCTGGCAATCTATCAGGCGCTGAGTTACGACTACGATCCTGCCCGCGCGGCAATGCTGGCGCTGCTCCAGATGGTGTGCTGCCTCGGGCTGGTGCTGTTGAGTCAGCGATTGAGTAAGGCCATTGCGCCCGGCACCACGCTGCTGCAAGGCTGGCGCGACCCGGACGATCGTCTGCATAGCCGCATTTGCGACACGGTGTTAATTGTGCTGGCGCTGCTGCTGTTGCTGCCACCGTTACTGGCGGTGATCGTCGATGGGGTAAATCGCCAGTTGCCGGAAGTGCTGGCACAACCGGTGCTGTGGCAGGCGCTGTGGACCTCGTTGCGTATTGCGCTGGCGGCAGGTGTATTGTGCGTAGTGCTGACCATGATGCTGCTATGGAGCAGTCGCGAACTGCGGGCGCGGCAGAAAATGCTGGCGGGTCAGGTGCTGGAGATGAGCGGCATGTTGATCCTCGCCATGCCGGGGATTGTGCTGGCTACCGGCTTCTTTTTACTGCTCAACAACACTATCGGCCTGCCACAATCTGCTGACGGCATTGTGATTTTCACCAATGCGTTAATGGCGATCCCTTATGCGCTGAAAGTGCTGGAAAACCCGATGCGCGATATCACCGCCCGCTACAGCATGTTATGTCAGTCGCTGGGGATTGAAGGCTGGTCACGCTTAAAAGTGGTGGAGCTGCGCGCCCTGAAACGTCCACTGGCGCAGGCGCTGGCCTTTGCATGCGTGCTGTCGATTGGTGATTTTGGCGTGGTGGCGTTGTTCGGTAACGATGATTTCCGCACCCTGCCGTTTTATCTCTACCAGCAAATTGGCTCCTATCGCAGCCAGGACGGTGCGGTCACCGCGTTAATTCTGCTGCTGCTCTGTTTTCTGCTGTTTACCGTGATTGAAAAACTACCGGGGCGAAATGTTAAAACTGACTGA", + "dna_sequence_length": 1611, + "functions": [ + "thiamine/thiamine pyrophosphate ABC transporter permease" + ], + "id": "CDS_65", + "location": [ + [ + "NC_000913", + 74521, + "-", + 1611 + ] + ], + "md5": "5b52c00046faa26a6efdb3ecb754e1dc", + "parent_gene": "", + "protein_md5": "e67ba22d71ab1fd2ace7b0256be7a79c", + "protein_translation": "MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD", + "protein_translation_length": 536, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000249" + ], + [ + "gene_synonym", + "ECK0069" + ], + [ + "gene_synonym", + "EcoGene:EG11574" + ], + [ + "gene_synonym", + "GI:16128062" + ], + [ + "gene_synonym", + "GeneID:946306" + ], + [ + "gene_synonym", + "JW0067" + ], + [ + "gene_synonym", + "NP_414610.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31550" + ], + [ + "gene_synonym", + "b0068" + ], + [ + "gene_synonym", + "sfuA" + ], + [ + "gene_synonym", + "tbpA" + ], + [ + "gene_synonym", + "thiB" + ], + [ + "gene_synonym", + "yabL" + ] + ], + "dna_sequence": "GTGTTAAAAAAATGTCTGCCCCTGCTGTTGCTGTGCACAGCGCCCGTTTTCGCTAAACCCGTTCTGACTGTTTATACCTACGATTCCTTCGCCGCCGACTGGGGGCCTGGTCCGGTGGTTAAAAAAGCCTTTGAAGCCGACTGTAATTGCGAACTGAAACTGGTGGCGCTGGAAGATGGCGTTTCGCTTCTCAACCGTCTACGGATGGAAGGCAAAAACAGTAAAGCCGATGTGGTGCTGGGGCTGGATAACAACCTGTTAGACGCCGCCAGTAAAACCGGACTGTTTGCCAAAAGCGGTGTGGCAGCGGATGCCGTTAACGTTCCCGGCGGCTGGAATAATGACACTTTCGTACCGTTTGATTATGGCTACTTCGCCTTCGTTTATGACAAGAACAAACTGAAAAACCCGCCACAAAGCCTGAAAGAACTGGTTGAGAGCGATCAAAACTGGCGGGTGATTTATCAGGATCCGCGCACCAGTACACCGGGGCTGGGTCTGTTGCTATGGATGCAAAAAGTCTATGGCGATGACGCCCCACAAGCCTGGCAGAAACTGGCGAAGAAAACGGTCACGGTCACCAAAGGCTGGAGCGAAGCCTACGGCCTGTTTTTAAAAGGTGAAAGCGATCTGGTACTGAGTTACACCACCTCTCCGGCTTATCACATTCTCGAAGAGAAGAAAGATAACTACGCCGCCGCGAACTTCAGCGAAGGTCACTATCTGCAAGTGGAAGTCGCCGCCCGCACCGCTGCCAGCAAGCAGCCGGAGCTGGCGCAAAAATTCCTCCAGTTTATGGTTTCTCCGGCTTTCCAGAATGCGATCCCAACCGGCAACTGGATGTATCCGGTGGCAAACGTCACGCTGCCTGCCGGTTTTGAAAAATTGACCAAACCCGCAACCACGTTGGAGTTCACGCCAGCCGAAGTGGCGGCACAACGTCAGGCATGGATTAGCGAATGGCAACGCGCCGTCAGCCGTTAA", + "dna_sequence_length": 984, + "functions": [ + "thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein" + ], + "id": "CDS_66", + "location": [ + [ + "NC_000913", + 75480, + "-", + 984 + ] + ], + "md5": "81eb1327d7709eae49c1f0aa94a3742f", + "parent_gene": "", + "protein_md5": "6621e2a53c142e7c0bfdc9a1644d2429", + "protein_translation": "MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000251" + ], + [ + "gene_synonym", + "ECK0070" + ], + [ + "gene_synonym", + "EcoGene:EG12094" + ], + [ + "gene_synonym", + "GI:16128063" + ], + [ + "gene_synonym", + "GeneID:944788" + ], + [ + "gene_synonym", + "JW0068" + ], + [ + "gene_synonym", + "NP_414611.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33595" + ], + [ + "gene_synonym", + "b0069" + ], + [ + "gene_synonym", + "sgrR" + ], + [ + "gene_synonym", + "yabN" + ] + ], + "dna_sequence": "ATGCCATCTGCTCGTCTGCAACAACAGTTCATCCGCCTGTGGCAATGCTGCGAGGGTAAATCGCAGGACACAACGCTCAACGAACTGGCAGCGTTATTGAGCTGCTCGCGTCGTCATATGCGCACCCTGCTCAACACCATGCAGGATCGCGGCTGGCTGACGTGGGAAGCGGAAGTCGGGCGCGGTAAACGCTCGCGTCTGACATTCCTCTATACCGGGCTGGCGCTTCAGCAACAGCGGGCGGAAGACCTGCTGGAGCAGGATCGTATCGATCAACTGGTGCAGTTGGTTGGCGACAAAGCGACTGTGCGGCAAATGCTGGTTTCTCATCTGGGCCGCAGCTTCCGCCAGGGGCGGCACATCCTGCGCGTGCTCTACTATCGTCCGTTGCGTAATCTGCTACCTGGCAGCGCATTGCGCCGTTCCGAAACCCATATCGCCCGGCAAATCTTCAGTTCGCTAACGCGCATAAATGAGGAAAATGGGGAACTGGAAGCAGACATCGCCCACCACTGGCAGCAAATTTCACCGCTTCACTGGCGTTTCTTTTTGCGTCCAGGAGTCCATTTTCACCATGGTCGTGAACTGGAAATGGACGATGTGATCGCCTCTTTAAAACGAATCAATACGCTGCCGCTCTATTCGCATATTGCTGACATTGTGTCGCCGACGCCCTGGACGCTGGATATCCATCTCACGCAACCGGACCGCTGGTTACCGTTACTGCTGGGGCAAGTTCCGGCGATGATCCTGCCGCGCGAATGGGAAACCCTCAGTAACTTTGCCAGCCATCCCATCGGCACCGGTCCGTATGCGGTGATTCGCAACAGCACCAATCAACTGAAAATTCAGGCATTCGATGACTTCTTCGGTTACCGGGCATTAATCGACGAAGTTAACGTCTGGGTTCTGCCGGAAATTGCCGACGAGCCAGCCGGAGGGCTGATGCTAAAAGGTCCACAGGGCGAGGAAAAAGAGATTGAAAGCCGCCTGGAGGAAGGTTGCTACTATTTACTGTTCGACAGCCGCACCCATCGCGGGGCGAATCAGCAAGTCAGGGACTGGGTAAGCTATGTGCTTTCTCCAACTAATCTGGTCTATTTCGCTGAGGAACAGTACCAGCAACTGTGGTTCCCGGCTTATGGACTGCTCCCCCGTTGGCACCATGCCCGCACCATAAAGAGCGAAAAACCGGCTGGCCTGGAAAGCCTCACCCTAACCTTTTATCAGGATCACAGTGAGCATCGGGTGATTGCCGGGATCATGCAGCAGATTCTGGCAAGTCACCAGGTCACGCTGAAAATCAAAGAGATCGACTACGATCAGTGGCATACAGGAGAGATCGAAAGTGATATCTGGCTAAACAGCGCCAACTTTACCCTGCCGCTGGACTTCTCTGTTTTCGCACATTTATGCGAAGTGCCACTGCTACAACATTGCATTCCCATTGACTGGCAAGCCGACGCTGCTCGCTGGCGCAATGGCGAGATGAATCTGGCGAACTGGTGCCAGCAACTGGTCGCCAGCAAAGCGATGGTGCCATTATTGCACCACTGGCTGATCATTCAGGGGCAACGCAGTATGCGCGGCCTGCGCATGAATACCCTCGGCTGGTTCGATTTTAAATCAGCGTGGTTTGCGCCACCGGATCCATGA", + "dna_sequence_length": 1656, + "functions": [ + "transcriptional DNA-binding transcriptional activator of sgrS sRNA" + ], + "id": "CDS_67", + "location": [ + [ + "NC_000913", + 77299, + "-", + 1656 + ] + ], + "md5": "916dfb60800b725a406afa8ca0c92af3", + "parent_gene": "", + "protein_md5": "f54eecbacd9b35ac4c76c6f09f1400c6", + "protein_translation": "MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4477" + ], + [ + "gene_synonym", + "EcoGene:EG14467" + ], + [ + "gene_synonym", + "GI:226524697" + ], + [ + "gene_synonym", + "GeneID:7751624" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P5Z7" + ], + [ + "gene_synonym", + "YP_002791237.1" + ], + [ + "gene_synonym", + "b4662" + ], + [ + "gene_synonym", + "sgrT" + ] + ], + "dna_sequence": "ATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCGTTGGTTAAGCGTCCCACAACGATTAACCATGCTTGAAGGACTGATGCAGTGGGATGACCGCAATTCTGAAAGTTGA", + "dna_sequence_length": 132, + "functions": [ + "inhibitor of glucose uptake" + ], + "id": "CDS_68", + "location": [ + [ + "NC_000913", + 77388, + "+", + 132 + ] + ], + "md5": "4efeec2ec997f192a4eae52c64e47cdd", + "parent_gene": "", + "protein_md5": "abfa044baa298f169ea62ac6b48e1185", + "protein_translation": "MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES", + "protein_translation_length": 43, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000257" + ], + [ + "gene_synonym", + "ECK0072" + ], + [ + "gene_synonym", + "EcoGene:EG11754" + ], + [ + "gene_synonym", + "GI:49175994" + ], + [ + "gene_synonym", + "GeneID:944793" + ], + [ + "gene_synonym", + "JW0069" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31675" + ], + [ + "gene_synonym", + "YP_025293.1" + ], + [ + "gene_synonym", + "b0070" + ], + [ + "gene_synonym", + "setA" + ], + [ + "gene_synonym", + "yabM" + ] + ], + "dna_sequence": "ATGATCTGGATAATGACGATGGCTCGCCGTATGAACGGTGTTTACGCGGCATTTATGCTGGTCGCTTTTATGATGGGGGTGGCCGGGGCGCTACAGGCTCCTACATTGAGCTTATTTCTGAGTCGTGAGGTTGGCGCGCAACCTTTCTGGATCGGCCTCTTTTATACGGTGAATGCTATTGCTGGGATCGGCGTAAGCCTCTGGTTGGCAAAACGTTCTGACAGTCAGGGCGATCGGCGAAAACTGATTATATTTTGCTGTTTGATGGCTATCGGCAATGCGCTATTGTTTGCATTTAATCGTCATTATCTGACGCTTATCACCTGTGGTGTGCTTCTGGCATCTCTGGCCAATACGGCAATGCCACAGTTATTTGCTCTGGCGCGGGAATATGCGGATAACTCGGCGCGAGAAGTGGTGATGTTTAGCTCGGTGATGCGTGCGCAGCTTTCTCTGGCATGGGTTATCGGTCCACCGTTGGCCTTTATGCTGGCGTTGAATTACGGCTTTACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAACTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGACCTGCAACACCATGTACATTATTGATATGCCGTTGTGGATCAGTAGCGAGTTAGGATTGCCAGACAAACTGGCGGGTTTCCTGATGGGGACGGCAGCTGGACTGGAAATACCAGCAATGATTCTGGCTGGCTACTATGTCAAACGTTATGGTAAGCGGCGAATGATGGTCATAGCAGTGGCGGCAGGAGTACTGTTTTACACCGGATTGATTTTCTTTAATAGCCGTATGGCGTTGATGACGCTGCAACTTTTTAACGCTGTATTTATCGGCATTGTTGCGGGTATTGGGATGCTATGGTTTCAGGATTTAATGCCTGGAAGAGCGGGGGCAGCTACCACCTTATTTACTAACAGTATTTCTACCGGGGTAATTCTGGCTGGCGTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGA", + "dna_sequence_length": 1179, + "functions": [ + "broad specificity sugar efflux system" + ], + "id": "CDS_69", + "location": [ + [ + "NC_000913", + 77621, + "+", + 1179 + ] + ], + "md5": "faf1a42a221a79cd77709418a13a3644", + "parent_gene": "", + "protein_md5": "1074d081a970e24900388928dd262a63", + "protein_translation": "MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000259" + ], + [ + "gene_synonym", + "ECK0073" + ], + [ + "gene_synonym", + "EcoGene:EG11575" + ], + [ + "gene_synonym", + "GI:16128065" + ], + [ + "gene_synonym", + "GeneID:945642" + ], + [ + "gene_synonym", + "JW0070" + ], + [ + "gene_synonym", + "NP_414613.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30126" + ], + [ + "gene_synonym", + "b0071" + ], + [ + "gene_synonym", + "leuD" + ] + ], + "dna_sequence": "ATGGCAGAGAAATTTATCAAACACACAGGCCTGGTGGTTCCGCTGGATGCCGCCAATGTCGATACCGATGCAATCATCCCGAAACAGTTTTTGCAGAAAGTGACCCGTACGGGTTTTGGCGCGCATCTGTTTAACGACTGGCGTTTTCTGGATGAAAAAGGCCAACAGCCAAACCCGGACTTCGTGCTGAACTTCCCGCAGTATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTGTGGCTCTTCGCGTGAGCACGCGCCCTGGGCATTGACCGACTACGGTTTTAAAGTGGTGATTGCGCCGAGTTTTGCTGACATCTTCTACGGCAATAGCTTTAACAACCAGCTGCTGCCGGTGAAATTAAGCGATGCAGAAGTGGACGAACTGTTTGCGCTGGTGAAAGCTAATCCGGGGATCCATTTCGACGTGGATCTGGAAGCGCAAGAGGTGAAAGCGGGAGAGAAAACCTATCGCTTTACCATCGATGCCTTCCGCCGCCACTGCATGATGAACGGTCTGGACAGTATTGGGCTTACCTTGCAGCACGACGACGCCATTGCCGCTTATGAAGCAAAACAACCTGCGTTTATGAATTAA", + "dna_sequence_length": 606, + "functions": [ + "3-isopropylmalate dehydratase small subunit" + ], + "id": "CDS_70", + "location": [ + [ + "NC_000913", + 79453, + "-", + 606 + ] + ], + "md5": "e5b60c7d4d83d924225880843c6e6bf1", + "parent_gene": "", + "protein_md5": "108aa625085bb3e3d8f6207045d4692e", + "protein_translation": "MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000261" + ], + [ + "gene_synonym", + "ECK0074" + ], + [ + "gene_synonym", + "EcoGene:EG11576" + ], + [ + "gene_synonym", + "GI:16128066" + ], + [ + "gene_synonym", + "GeneID:945076" + ], + [ + "gene_synonym", + "JW0071" + ], + [ + "gene_synonym", + "NP_414614.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6A6" + ], + [ + "gene_synonym", + "b0072" + ], + [ + "gene_synonym", + "leuC" + ] + ], + "dna_sequence": "ATGGCTAAGACGTTATACGAAAAATTGTTCGACGCTCACGTTGTGTACGAAGCCGAAAACGAAACCCCACTGTTATATATCGACCGCCACCTGGTGCATGAAGTGACCTCACCGCAGGCGTTCGATGGTCTGCGCGCCCACGGTCGCCCGGTACGTCAGCCGGGCAAAACCTTCGCTACCATGGATCACAACGTCTCTACCCAGACCAAAGACATTAATGCCTGCGGTGAAATGGCGCGTATCCAGATGCAGGAACTGATCAAAAACTGCAAAGAATTTGGCGTCGAACTGTATGACCTGAATCACCCGTATCAGGGGATCGTCCACGTAATGGGGCCGGAACAGGGCGTCACCTTGCCGGGGATGACCATTGTCTGCGGCGACTCGCATACCGCCACCCACGGCGCGTTTGGCGCACTGGCCTTTGGTATCGGCACTTCCGAAGTTGAACACGTACTGGCAACGCAAACCCTGAAACAGGGCCGCGCAAAAACCATGAAAATTGAAGTCCAGGGCAAAGCCGCGCCGGGCATTACCGCAAAAGATATCGTGCTGGCAATTATCGGTAAAACCGGTAGCGCAGGCGGCACCGGGCATGTGGTGGAGTTTTGCGGCGAAGCAATCCGTGATTTAAGCATGGAAGGTCGTATGACCCTGTGCAATATGGCAATCGAAATGGGCGCAAAAGCCGGTCTGGTTGCACCGGACGAAACCACCTTTAACTATGTCAAAGGCCGTCTGCATGCGCCGAAAGGCAAAGATTTCGACGACGCCGTTGCCTACTGGAAAACCCTGCAAACCGACGAAGGCGCAACTTTCGATACCGTTGTCACTCTGCAAGCAGAAGAAATTTCACCGCAGGTCACCTGGGGCACCAATCCCGGCCAGGTGATTTCCGTGAACGACAATATTCCCGATCCGGCTTCGTTTGCCGATCCGGTTGAACGCGCGTCGGCAGAAAAAGCGCTGGCCTATATGGGGCTGAAACCGGGTATTCCGCTGACCGAAGTGGCTATCGACAAAGTGTTTATCGGTTCCTGTACCAACTCGCGCATTGAAGATTTACGCGCGGCAGCGGAGATCGCCAAAGGGCGAAAAGTCGCGCCAGGCGTGCAGGCACTGGTGGTTCCCGGCTCTGGCCCGGTAAAAGCCCAGGCGGAAGCGGAAGGTCTGGATAAAATCTTTATTGAAGCCGGTTTTGAATGGCGCTTGCCTGGCTGCTCAATGTGTCTGGCGATGAACAACGACCGTCTGAATCCGGGCGAACGTTGTGCCTCCACCAGCAACCGTAACTTTGAAGGCCGCCAGGGGCGCGGCGGGCGCACGCATCTGGTCAGCCCGGCAATGGCTGCCGCTGCTGCTGTGACCGGACATTTCGCCGACATTCGCAACATTAAATAA", + "dna_sequence_length": 1401, + "functions": [ + "3-isopropylmalate dehydratase large subunit" + ], + "id": "CDS_71", + "location": [ + [ + "NC_000913", + 80864, + "-", + 1401 + ] + ], + "md5": "e5f1f1270252c570cfa1f30129417482", + "parent_gene": "", + "protein_md5": "4d42f5f16566dbb9e6cade35cf385fe1", + "protein_translation": "MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000265" + ], + [ + "gene_synonym", + "ECK0075" + ], + [ + "gene_synonym", + "EcoGene:EG11577" + ], + [ + "gene_synonym", + "GI:90111082" + ], + [ + "gene_synonym", + "GeneID:944798" + ], + [ + "gene_synonym", + "JW5807" + ], + [ + "gene_synonym", + "NP_414615.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30125" + ], + [ + "gene_synonym", + "b0073" + ], + [ + "gene_synonym", + "leuB" + ] + ], + "dna_sequence": "ATGTCGAAGAATTACCATATTGCCGTATTGCCGGGGGACGGTATTGGTCCGGAAGTGATGACCCAGGCGCTGAAAGTGCTGGATGCCGTGCGCAACCGCTTTGCGATGCGCATCACCACCAGCCATTACGATGTAGGCGGCGCAGCCATTGATAACCACGGGCAACCACTGCCGCCTGCGACGGTTGAAGGTTGTGAGCAAGCCGATGCCGTGCTGTTTGGCTCGGTAGGCGGCCCGAAGTGGGAACATTTACCACCAGACCAGCAACCAGAACGCGGCGCGCTGCTGCCTCTGCGTAAGCACTTCAAATTATTCAGCAACCTGCGCCCGGCAAAACTGTATCAGGGGCTGGAAGCATTCTGTCCGCTGCGTGCAGACATTGCCGCAAACGGCTTCGACATCCTGTGTGTGCGCGAACTGACCGGCGGCATCTATTTCGGTCAGCCAAAAGGCCGCGAAGGTAGCGGACAATATGAAAAAGCCTTTGATACCGAGGTGTATCACCGTTTTGAGATCGAACGTATCGCCCGCATCGCGTTTGAATCTGCTCGCAAGCGTCGCCACAAAGTGACGTCGATCGATAAAGCCAACGTGCTGCAATCCTCTATTTTATGGCGGGAGATCGTTAACGAGATCGCCACGGAATACCCGGATGTCGAACTGGCGCATATGTACATCGACAACGCCACCATGCAGCTGATTAAAGATCCATCACAGTTTGACGTTCTGCTGTGCTCCAACCTGTTTGGCGACATTCTGTCTGACGAGTGCGCAATGATCACTGGCTCGATGGGGATGTTGCCTTCCGCCAGCCTGAACGAGCAAGGTTTTGGACTGTATGAACCGGCGGGCGGCTCGGCACCAGATATCGCAGGCAAAAACATCGCCAACCCGATTGCACAAATCCTTTCGCTGGCACTGCTGCTGCGTTACAGCCTGGATGCCGATGATGCGGCTTGCGCCATTGAACGCGCCATTAACCGCGCATTAGAAGAAGGCATTCGCACCGGGGATTTAGCCCGTGGCGCTGCCGCCGTTAGTACCGATGAAATGGGCGATATCATTGCCCGCTATGTAGCAGAAGGGGTGTAA", + "dna_sequence_length": 1092, + "functions": [ + "3-isopropylmalate dehydrogenase, NAD(+)-dependent" + ], + "id": "CDS_72", + "location": [ + [ + "NC_000913", + 81958, + "-", + 1092 + ] + ], + "md5": "a645e5fadec1340f1bdc87c9c98f8d37", + "parent_gene": "", + "protein_md5": "9f236d51fdd36569883f4b5581d5ad7f", + "protein_translation": "MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVAEGV", + "protein_translation_length": 363, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000267" + ], + [ + "gene_synonym", + "ECK0076" + ], + [ + "gene_synonym", + "EcoGene:EG11226" + ], + [ + "gene_synonym", + "GI:16128068" + ], + [ + "gene_synonym", + "GeneID:947465" + ], + [ + "gene_synonym", + "JW0073" + ], + [ + "gene_synonym", + "NP_414616.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09151" + ], + [ + "gene_synonym", + "b0074" + ], + [ + "gene_synonym", + "leuA" + ] + ], + "dna_sequence": "ATGAGCCAGCAAGTCATTATTTTCGATACCACATTGCGCGACGGTGAACAGGCGTTACAGGCAAGCTTGAGTGTGAAAGAAAAACTGCAAATTGCGCTGGCCCTTGAGCGTATGGGTGTTGACGTGATGGAAGTCGGTTTCCCCGTCTCTTCGCCGGGCGATTTTGAATCGGTGCAAACCATCGCCCGCCAGGTTAAAAACAGCCGCGTATGTGCGTTAGCTCGCTGCGTGGAAAAAGATATCGACGTGGCGGCCGAATCCCTGAAAGTCGCCGAAGCCTTCCGTATTCATACCTTTATTGCCACTTCGCCAATGCACATCGCCACCAAGCTGCGCAGCACGCTGGACGAGGTGATCGAACGCGCTATCTATATGGTGAAACGCGCCCGTAATTACACCGATGATGTTGAATTTTCTTGCGAAGATGCCGGGCGTACACCCATTGCCGATCTGGCGCGAGTGGTCGAAGCGGCGATTAATGCCGGTGCCACCACCATCAACATTCCGGACACCGTGGGCTACACCATGCCGTTTGAGTTCGCCGGAATCATCAGCGGCCTGTATGAACGCGTGCCTAACATCGACAAAGCCATTATCTCCGTACATACCCACGACGATTTGGGCCTGGCGGTCGGAAACTCACTGGCGGCGGTACATGCCGGTGCACGCCAGGTGGAAGGCGCAATGAACGGGATCGGCGAGCGTGCCGGAAACTGTTCCCTGGAAGAAGTCATCATGGCGATCAAAGTTCGTAAGGATATTCTCAACGTCCACACCGCCATTAATCACCAGGAGATATGGCGCACCAGCCAGTTAGTTAGCCAGATTTGTAATATGCCGATCCCGGCAAACAAAGCCATTGTTGGCAGCGGCGCATTCGCACACTCCTCCGGTATACACCAGGATGGCGTGCTGAAAAACCGCGAAAACTACGAAATCATGACACCAGAATCTATTGGTCTGAACCAAATCCAGCTGAATCTGACCTCTCGTTCGGGGCGTGCGGCGGTGAAACATCGCATGGATGAGATGGGGTATAAAGAAAGTGAATATAATTTAGACAATTTGTACGATGCTTTCCTGAAGCTGGCGGACAAAAAAGGTCAGGTGTTTGATTACGATCTGGAGGCGCTGGCCTTCATCGGTAAGCAGCAAGAAGAGCCGGAGCATTTCCGTCTGGATTACTTCAGCGTGCAGTCTGGCTCTAACGATATCGCCACCGCCGCCGTCAAACTGGCCTGTGGCGAAGAAGTCAAAGCAGAAGCCGCCAACGGTAACGGTCCGGTCGATGCCGTCTATCAGGCAATTAACCGCATCACTGAATATAACGTCGAACTGGTGAAATACAGCCTGACCGCCAAAGGCCACGGTAAAGATGCGCTGGGTCAGGTGGATATCGTCGCTAACTACAACGGTCGCCGCTTCCACGGCGTCGGCCTGGCTACCGATATTGTCGAGTCATCTGCCAAAGCCATGGTGCACGTTCTGAACAATATCTGGCGTGCCGCAGAAGTCGAAAAAGAGTTGCAACGCAAAGCTCAACACAACGAAAACAACAAGGAAACCGTGTGA", + "dna_sequence_length": 1572, + "functions": [ + "2-isopropylmalate synthase" + ], + "id": "CDS_73", + "location": [ + [ + "NC_000913", + 83529, + "-", + 1572 + ] + ], + "md5": "88f203643a50cc1f9c4fb0e5a4d05392", + "parent_gene": "", + "protein_md5": "2e7ad6989e4f507866d7138706f23ec1", + "protein_translation": "MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGRAAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFRLDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITEYNVELVKYSLTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQHNENNKETV", + "protein_translation_length": 523, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000269" + ], + [ + "gene_synonym", + "ECK0077" + ], + [ + "gene_synonym", + "EcoGene:EG11280" + ], + [ + "gene_synonym", + "GI:16128069" + ], + [ + "gene_synonym", + "GeneID:946072" + ], + [ + "gene_synonym", + "JW0074" + ], + [ + "gene_synonym", + "NP_414617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD79" + ], + [ + "gene_synonym", + "b0075" + ], + [ + "gene_synonym", + "leuL" + ], + [ + "gene_synonym", + "leuLP" + ] + ], + "dna_sequence": "ATGACTCACATCGTTCGCTTTATCGGTCTACTACTACTAAACGCATCTTCTTTGCGCGGTAGACGAGTGAGCGGCATCCAGCATTAA", + "dna_sequence_length": 87, + "functions": [ + "leu operon leader peptide" + ], + "id": "CDS_74", + "location": [ + [ + "NC_000913", + 83708, + "-", + 87 + ] + ], + "md5": "3822e3797a7f64366f83fb60c525c292", + "parent_gene": "", + "protein_md5": "b0d7e14348bbe9ca5277cc67cff46ff4", + "protein_translation": "MTHIVRFIGLLLLNASSLRGRRVSGIQH", + "protein_translation_length": 28, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000280" + ], + [ + "gene_synonym", + "ECK0078" + ], + [ + "gene_synonym", + "EcoGene:EG10531" + ], + [ + "gene_synonym", + "GI:90111083" + ], + [ + "gene_synonym", + "GeneID:949034" + ], + [ + "gene_synonym", + "JW0075" + ], + [ + "gene_synonym", + "NP_414618.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10151" + ], + [ + "gene_synonym", + "b0076" + ], + [ + "gene_synonym", + "leuO" + ] + ], + "dna_sequence": "ATGCCAGAGGTACAAACAGATCATCCAGAGACGGCGGAGTTAAGCAAACCACAGCTACGCATGGTCGATCTCAACTTATTAACCGTTTTCGATGCCGTGATGCAGGAGCAAAACATTACTCGTGCCGCTCATGTTCTGGGAATGTCGCAACCTGCGGTCAGTAACGCTGTTGCACGCCTGAAGGTGATGTTTAATGACGAGCTTTTTGTTCGTTATGGCCGTGGTATTCAACCGACTGCTCGCGCATTTCAACTTTTTGGTTCAGTTCGTCAGGCATTGCAACTAGTACAAAATGAATTGCCTGGTTCAGGTTTTGAACCCGCGAGCAGTGAACGTGTATTTCATCTTTGTGTTTGCAGCCCGTTAGACAGCATTCTGACCTCGCAGATTTATAATCACATTGAGCAGATTGCGCCAAATATACATGTTATGTTCAAGTCTTCATTAAATCAGAACACTGAACATCAGCTGCGTTATCAGGAAACGGAGTTTGTGATTAGTTATGAAGACTTCCATCGTCCTGAATTTACCAGCGTACCATTATTTAAAGATGAAATGGTGCTGGTAGCCAGCAAAAATCATCCAACAATTAAGGGCCCGTTACTGAAACATGATGTTTATAACGAACAACATGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCTTGGTATGACACGGTAGATAAGCAAGCCAGTATCGCGTATCAGGGCATGGCAATGATGAGCGTACTTAGCGTGGTGTCGCAAACGCATTTGGTCGCTATTGCGCCGCGTTGGCTGGCTGAAGAGTTCGCTGAATCCTTAGAATTACAGGTATTACCGCTGCCGTTAAAACAAAACAGCAGAACCTGTTATCTCTCCTGGCATGAAGCTGCCGGGCGCGATAAAGGCCATCAGTGGATGGAAGAGCAATTAGTCTCAATTTGCAAACGCTAA", + "dna_sequence_length": 945, + "functions": [ + "global transcription factor" + ], + "id": "CDS_75", + "location": [ + [ + "NC_000913", + 84368, + "+", + 945 + ] + ], + "md5": "3f253f62e1670d3c5d5d79ab40fc1507", + "parent_gene": "", + "protein_md5": "95f6400c1703e1dccdccad08feeada38", + "protein_translation": "MPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000290" + ], + [ + "gene_synonym", + "ECK0079" + ], + [ + "gene_synonym", + "EcoGene:EG10500" + ], + [ + "gene_synonym", + "GI:90111084" + ], + [ + "gene_synonym", + "GeneID:948793" + ], + [ + "gene_synonym", + "JW0076" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00893" + ], + [ + "gene_synonym", + "YP_025294.2" + ], + [ + "gene_synonym", + "b0077" + ], + [ + "gene_synonym", + "ilvI" + ] + ], + "dna_sequence": "ATGGAGATGTTGTCTGGAGCCGAGATGGTCGTCCGATCGCTTATCGATCAGGGCGTTAAACAAGTATTCGGTTATCCCGGAGGCGCAGTCCTTGATATTTATGATGCATTGCATACCGTGGGTGGTATTGATCATGTATTAGTTCGTCATGAGCAGGCGGCGGTGCATATGGCCGATGGCCTGGCGCGCGCGACCGGGGAAGTCGGCGTCGTGCTGGTAACGTCGGGTCCAGGGGCGACCAATGCGATTACTGGCATCGCCACCGCTTATATGGATTCCATTCCATTAGTTGTCCTTTCCGGGCAGGTAGCGACCTCGTTGATAGGTTACGATGCCTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCACTACTACCGGACATAAAGGGCAAATTAAGCGTGCTCTGCAAACGCTGGTAGCGGCAAAAAAACCGGTTGTCTACGTAGGCGGTGGGGCAATCACGGCGGGCTGCCATCAGCAGTTGAAAGAAACGGTGGAGGCGTTGAATCTGCCCGTTGTTTGCTCATTGATGGGGCTGGGGGCGTTTCCGGCAACGCATCGTCAGGCACTGGGCATGCTGGGAATGCACGGTACCTACGAAGCCAATATGACGATGCATAACGCGGATGTGATTTTCGCCGTCGGGGTACGATTTGATGACCGAACGACGAACAATCTGGCAAAGTACTGCCCAAATGCCACTGTTCTGCATATCGATATTGATCCTACTTCCATTTCTAAAACCGTGACTGCGGATATCCCGATTGTGGGGGATGCTCGCCAGGTCCTCGAACAAATGCTTGAACTCTTGTCGCAAGAATCCGCCCATCAACCACTGGATGAGATCCGCGACTGGTGGCAGCAAATTGAACAGTGGCGCGCTCGTCAGTGCCTGAAATATGACACTCACAGTGAAAAGATTAAACCGCAGGCGGTGATCGAGACTCTTTGGCGGTTGACGAAGGGAGACGCTTACGTGACGTCCGATGTCGGGCAGCACCAGATGTTTGCTGCACTTTATTATCCATTCGACAAACCGCGTCGCTGGATCAATTCCGGTGGCCTCGGCACGATGGGTTTTGGTTTACCTGCGGCACTGGGCGTCAAAATGGCGTTGCCAGAAGAAACCGTGGTTTGCGTCACTGGCGACGGCAGTATTCAGATGAACATCCAGGAACTGTCTACCGCGTTGCAATACGAGTTGCCCGTACTGGTGGTGAATCTCAATAACCGCTATCTGGGGATGGTGAAGCAGTGGCAGGACATGATCTATTCCGGCCGTCATTCACAATCTTATATGCAATCGCTACCCGATTTCGTCCGTCTGGCGGAAGCCTATGGGCATGTCGGGATCCAGATTTCTCATCCGCATGAGCTGGAAAGCAAACTTAGCGAGGCGCTGGAACAGGTGCGCAATAATCGCCTGGTGTTTGTTGATGTTACCGTCGATGGCAGCGAGCACGTCTACCCGATGCAGATTCGCGGGGGCGGAATGGATGAAATGTGGTTAAGCAAAACGGAGAGAACCTGA", + "dna_sequence_length": 1725, + "functions": [ + "acetolactate synthase 3 large subunit" + ], + "id": "CDS_76", + "location": [ + [ + "NC_000913", + 85630, + "+", + 1725 + ] + ], + "md5": "caf0752a249703e7c5726b3c46e1a6dd", + "parent_gene": "", + "protein_md5": "5f12a997f27fae555456c91ae1fff791", + "protein_translation": "MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT", + "protein_translation_length": 574, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000294" + ], + [ + "gene_synonym", + "ECK0080" + ], + [ + "gene_synonym", + "EcoGene:EG10499" + ], + [ + "gene_synonym", + "GI:16128071" + ], + [ + "gene_synonym", + "GeneID:947267" + ], + [ + "gene_synonym", + "JW0077" + ], + [ + "gene_synonym", + "NP_414620.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00894" + ], + [ + "gene_synonym", + "b0078" + ], + [ + "gene_synonym", + "brnP" + ], + [ + "gene_synonym", + "ilvH" + ] + ], + "dna_sequence": "ATGCGCCGGATATTATCAGTCTTACTCGAAAATGAATCAGGCGCGTTATCCCGCGTGATTGGCCTTTTTTCCCAGCGTGGCTACAACATTGAAAGCCTGACCGTTGCGCCAACCGACGATCCGACATTATCGCGTATGACCATCCAGACCGTGGGCGATGAAAAAGTACTTGAGCAGATCGAAAAGCAATTACACAAACTGGTCGATGTCTTGCGCGTGAGTGAGTTGGGGCAGGGCGCGCATGTTGAGCGGGAAATCATGCTGGTGAAAATTCAGGCCAGCGGTTACGGGCGTGACGAAGTGAAACGTAATACGGAAATATTCCGTGGGCAAATTATCGATGTCACACCCTCGCTTTATACCGTTCAATTAGCAGGCACCAGCGGTAAGCTTGATGCATTTTTAGCATCGATTCGCGATGTGGCGAAAATTGTGGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGA", + "dna_sequence_length": 492, + "functions": [ + "acetolactate synthase 3, small subunit, valine-sensitive" + ], + "id": "CDS_77", + "location": [ + [ + "NC_000913", + 87357, + "+", + 492 + ] + ], + "md5": "c79226dce66d10882115fab670ebf312", + "parent_gene": "", + "protein_md5": "20c9b2c99325f00f97eca293da032b3f", + "protein_translation": "MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000299" + ], + [ + "gene_synonym", + "ECK0081" + ], + [ + "gene_synonym", + "EcoGene:EG10338" + ], + [ + "gene_synonym", + "GI:16128073" + ], + [ + "gene_synonym", + "GeneID:944804" + ], + [ + "gene_synonym", + "JW0078" + ], + [ + "gene_synonym", + "NP_414622.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACP1" + ], + [ + "gene_synonym", + "b0080" + ], + [ + "gene_synonym", + "cra" + ], + [ + "gene_synonym", + "fruC" + ], + [ + "gene_synonym", + "fruR" + ], + [ + "gene_synonym", + "fruS?" + ], + [ + "gene_synonym", + "serR?" + ], + [ + "gene_synonym", + "shl" + ] + ], + "dna_sequence": "GTGAAACTGGATGAAATCGCTCGGCTGGCGGGAGTGTCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTGCTCAGAAGATCAGCCAGACAACGAAATGCGGTGCATTGAGCACCTTTTACAGCGTCAGGTTGATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGACCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTCCCGCCGAGACGGTGCTTTATCTTGGTGCGCTACCGGAGCTTTCTGTCAGCTTCCTGCGTGAACAAGGTTTCCGTACTGCCTGGAAAGATGATCCGCGCGAAGTGCATTTCCTGTATGCCAACAGCTATGAGCGGGAGGCGGCTGCCCAGTTATTCGAAAAATGGCTGGAAACGCATCCGATGCCGCAGGCGCTGTTCACAACGTCGTTTGCGTTGTTGCAAGGAGTGATGGATGTCACGCTGCGTCGCGACGGCAAACTGCCTTCTGACCTGGCAATTGCCACCTTTGGCGATAACGAACTGCTCGACTTCTTACAGTGTCCGGTGCTGGCAGTGGCTCAACGTCACCGCGATGTCGCAGAGCGTGTGCTGGAGATTGTCCTGGCAAGCCTGGACGAACCGCGTAAGCCAAAACCTGGTTTAACGCGCATTAAACGTAATCTCTATCGCCGCGGCGTGCTCAGCCGTAGCTAA", + "dna_sequence_length": 1005, + "functions": [ + "transcriptional repressor-activator for carbon metabolism" + ], + "id": "CDS_78", + "location": [ + [ + "NC_000913", + 88028, + "+", + 1005 + ] + ], + "md5": "8108b82ca23fc82d2bbff27ccabe465c", + "parent_gene": "", + "protein_md5": "b69733282dba9d9c66611dcc06e86583", + "protein_translation": "MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000302" + ], + [ + "gene_synonym", + "ECK0082" + ], + [ + "gene_synonym", + "EcoGene:EG11084" + ], + [ + "gene_synonym", + "GI:16128074" + ], + [ + "gene_synonym", + "GeneID:944810" + ], + [ + "gene_synonym", + "JW0079" + ], + [ + "gene_synonym", + "NP_414623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22186" + ], + [ + "gene_synonym", + "b0081" + ], + [ + "gene_synonym", + "mraZ" + ], + [ + "gene_synonym", + "yabB" + ] + ], + "dna_sequence": "ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCCGTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTTATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCGGGCTGACAAAAGAAGTGATGCTGGTTGGACAGTTCAACAAGTTTGAGCTGTGGGATGAAACAACCTGGCATCAACAGGTCAAGGAAGATATCGACGCAGAGCAGTTGGCTACCGGAGACTTATCGGAGCGACTGCAGGACTTGTCTCTATAA", + "dna_sequence_length": 459, + "functions": [ + "RsmH methytransferase inhibitor" + ], + "id": "CDS_79", + "location": [ + [ + "NC_000913", + 89634, + "+", + 459 + ] + ], + "md5": "780344597af620c048cfdf9431b9c296", + "parent_gene": "", + "protein_md5": "caf26526566e5443399fb4a9b79e8df5", + "protein_translation": "MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIYHPCLLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000304" + ], + [ + "gene_synonym", + "ECK0083" + ], + [ + "gene_synonym", + "EcoGene:EG11085" + ], + [ + "gene_synonym", + "GI:16128075" + ], + [ + "gene_synonym", + "GeneID:944806" + ], + [ + "gene_synonym", + "JW0080" + ], + [ + "gene_synonym", + "NP_414624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60390" + ], + [ + "gene_synonym", + "b0082" + ], + [ + "gene_synonym", + "mraW" + ], + [ + "gene_synonym", + "rsmH" + ], + [ + "gene_synonym", + "yabC" + ] + ], + "dna_sequence": "ATGATGGAAAACTATAAACATACTACGGTGCTGCTGGATGAAGCCGTTAATGGCCTCAATATCCGTCCTGATGGCATCTACATTGATGGGACTTTTGGTCGCGGTGGTCACTCACGTCTGATCCTCTCGCAGCTTGGCGAAGAGGGGCGTTTGCTGGCGATCGATCGCGACCCGCAGGCTATCGCCGTTGCGAAGACTATTGATGATCCGCGCTTCTCCATCATCCACGGACCTTTCTCCGCGCTGGGCGAATACGTTGCCGAGCGCGATCTTATCGGCAAGATCGACGGCATTCTCCTCGATCTTGGCGTCTCTTCACCGCAACTTGATGATGCTGAACGTGGCTTTTCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAGTCGTGGCTGCTGCAACGCCGGTGAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAACTGGAGGAGATAGAGCAGGCGCTAAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATTGTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGATGACTGAAGAGCAGCTCAAAAAACTGGGTGGCCGTCAGCTGCGAGCACTAGGCAAGTTAATGCCGGGCGAAGAAGAGGTGGCTGAGAACCCTCGTGCCCGTAGTTCAGTTCTGCGTATTGCAGAGAGGACGAATGCATGA", + "dna_sequence_length": 942, + "functions": [ + "16S rRNA m(4)C1402 methyltransferase, SAM-dependent" + ], + "id": "CDS_80", + "location": [ + [ + "NC_000913", + 90094, + "+", + 942 + ] + ], + "md5": "4bb729530d8b915b14280fd6c9e060da", + "parent_gene": "", + "protein_md5": "60e578c177a169cec19325fad173e260", + "protein_translation": "MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000306" + ], + [ + "gene_synonym", + "ECK0084" + ], + [ + "gene_synonym", + "EcoGene:EG11086" + ], + [ + "gene_synonym", + "GI:16128076" + ], + [ + "gene_synonym", + "GeneID:944803" + ], + [ + "gene_synonym", + "JW0081" + ], + [ + "gene_synonym", + "NP_414625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEN4" + ], + [ + "gene_synonym", + "b0083" + ], + [ + "gene_synonym", + "ftsL" + ], + [ + "gene_synonym", + "mraR" + ], + [ + "gene_synonym", + "yabD" + ] + ], + "dna_sequence": "ATGATCAGCAGAGTGACAGAAGCTCTAAGCAAAGTTAAAGGATCGATGGGAAGCCACGAGCGCCATGCATTGCCTGGTGTTATCGGTGACGATCTTTTGCGATTTGGGAAGCTGCCACTCTGCCTGTTCATTTGCATTATTTTGACGGCGGTGACTGTGGTAACCACGGCGCACCATACCCGTTTACTGACCGCTCAGCGCGAACAACTGGTGCTGGAGCGAGATGCTTTAGACATTGAATGGCGCAACCTGATCCTTGAAGAGAATGCGCTCGGCGACCATAGCCGGGTGGAAAGGATCGCCACGGAAAAGCTGCAAATGCAGCATGTTGATCCGTCACAAGAAAATATCGTAGTGCAAAAATAA", + "dna_sequence_length": 366, + "functions": [ + "membrane bound cell division leucine zipper septum protein" + ], + "id": "CDS_81", + "location": [ + [ + "NC_000913", + 91032, + "+", + 366 + ] + ], + "md5": "55122f2f83c86cb0e2d4b6c19a2d89c2", + "parent_gene": "", + "protein_md5": "049383c87ab3f6e97f9a4884f97c116f", + "protein_translation": "MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQK", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000309" + ], + [ + "gene_synonym", + "ECK0085" + ], + [ + "gene_synonym", + "EcoGene:EG10341" + ], + [ + "gene_synonym", + "GI:16128077" + ], + [ + "gene_synonym", + "GeneID:944799" + ], + [ + "gene_synonym", + "JW0082" + ], + [ + "gene_synonym", + "NP_414626.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD68" + ], + [ + "gene_synonym", + "b0084" + ], + [ + "gene_synonym", + "ftsI" + ], + [ + "gene_synonym", + "pbpB" + ], + [ + "gene_synonym", + "sep" + ] + ], + "dna_sequence": "ATGAAAGCAGCGGCGAAAACGCAGAAACCAAAACGTCAGGAAGAACATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTGGTCGCCCGTTAGCGGTGAGCGTGCCGGTAAAAGCGATTTGGGCTGACCCGAAAGAAGTGCATGACGCTGGCGGTATCAGCGTCGGTGACCGCTGGAAGGCGCTGGCTAACGCGCTCAATATTCCGCTGGATCAGCTTTCAGCCCGCATTAACGCCAACCCGAAAGGGCGCTTTATTTATCTGGCGCGTCAGGTGAACCCTGACATGGCGGACTACATCAAAAAACTGAAACTGCCGGGGATTCATCTGCGTGAAGAGTCTCGCCGTTACTATCCGTCCGGCGAAGTGACTGCTCACCTCATCGGCTTTACTAACGTCGATAGTCAAGGGATTGAGGGCGTTGAGAAGAGTTTCGATAAATGGCTTACCGGGCAGCCGGGTGAGCGCATTGTGCGTAAAGACCGCTATGGTCGCGTAATTGAAGATATTTCTTCTACTGACAGCCAGGCAGCGCACAACCTGGCGCTGAGTATTGATGAACGCCTGCAGGCGCTGGTTTATCGCGAACTGAACAACGCGGTGGCCTTTAACAAGGCTGAATCTGGTAGCGCCGTGCTGGTGGATGTCAACACCGGTGAAGTGCTGGCGATGGCTAACAGCCCGTCATACAACCCTAACAATCTGAGCGGCACGCCGAAAGAGGCGATGCGTAACCGTACCATCACCGACGTGTTTGAACCGGGCTCAACGGTTAAACCGATGGTGGTAATGACCGCGTTGCAACGTGGCGTGGTGCGGGAAAACTCGGTACTCAATACCATTCCTTATCGAATTAACGGCCACGAAATCAAAGACGTGGCACGCTACAGCGAATTAACCCTGACCGGGGTATTACAGAAGTCGAGTAACGTCGGTGTTTCCAAGCTGGCGTTAGCGATGCCGTCCTCAGCGTTAGTAGATACTTACTCACGTTTTGGACTGGGAAAAGCGACCAATTTGGGGTTGGTCGGAGAACGCAGTGGCTTATATCCTCAAAAACAACGGTGGTCTGACATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGTTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTACCGCGAAAAAGGTCGGGCCGGACGGTCGCTACATCAATAAATATATTGCTTATACCGCAGGCGTTGCGCCTGCGAGTCAGCCGCGCTTCGCGCTGGTTGTTGTTATCAACGATCCGCAGGCGGGTAAATACTACGGCGGCGCCGTTTCCGCGCCGGTCTTTGGTGCCATCATGGGCGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAA", + "dna_sequence_length": 1767, + "functions": [ + "transpeptidase involved in septal peptidoglycan synthesis", + "penicillin-binding protein 3" + ], + "id": "CDS_82", + "location": [ + [ + "NC_000913", + 91413, + "+", + 1767 + ] + ], + "md5": "055df5f07200c59934559055a22fd18c", + "parent_gene": "", + "protein_md5": "ca864650b3b215c619e7ca7958675e39", + "protein_translation": "MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS", + "protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000311" + ], + [ + "gene_synonym", + "ECK0086" + ], + [ + "gene_synonym", + "EcoGene:EG10621" + ], + [ + "gene_synonym", + "GI:16128078" + ], + [ + "gene_synonym", + "GeneID:944791" + ], + [ + "gene_synonym", + "JW0083" + ], + [ + "gene_synonym", + "NP_414627.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22188" + ], + [ + "gene_synonym", + "b0085" + ], + [ + "gene_synonym", + "murE" + ] + ], + "dna_sequence": "GTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTGCCATTATTGCAGAGGCGAAAGATGAGGCGACCGATGGTGAAATCCGTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGACGTTTTGCGCAATGGAAGTTTCCTCCCACGGGCTGGTACAGCACCGTGTGGCGGCATTGAAATTTGCGGCGTCGGTCTTTACCAACTTAAGCCGCGATCACCTTGATTATCATGGTGATATGGAACACTACGAAGCCGCGAAATGGCTGCTTTATTCTGAGCATCATTGCGGTCAGGCGATTATTAACGCCGACGATGAAGTGGGCCGCCGCTGGCTGGCAAAACTGCCGGACGCGGTTGCGGTATCAATGGAAGATCATATTAATCCGAACTGTCACGGACGCTGGTTGAAAGCGACCGAAGTGAACTATCACGACAGCGGTGCGACGATTCGCTTTAGCTCAAGTTGGGGCGATGGCGAAATTGAAAGCCATCTGATGGGCGCTTTTAACGTCAGCAACCTGCTGCTCGCGCTGGCGACACTGTTGGCACTCGGCTATCCACTGGCTGATCTGCTGAAAACCGCCGCGCGTCTGCAACCGGTTTGCGGACGTATGGAAGTGTTCACTGCGCCAGGCAAACCGACGGTGGTGGTGGATTACGCGCATACGCCGGATGCACTGGAAAAAGCCTTACAGGCGGCGCGTCTGCACTGTGCGGGCAAGCTGTGGTGTGTCTTTGGCTGTGGTGGCGATCGCGATAAAGGTAAGCGTCCACTGATGGGCGCAATTGCCGAAGAGTTTGCTGACGTGGCGGTGGTGACGGACGATAACCCGCGTACCGAAGAACCGCGTGCCATCATCAACGATATTCTGGCGGGAATGTTAGATGCCGGACATGCCAAAGTGATGGAAGGCCGTGCTGAAGCGGTGACTTGCGCCGTTATGCAGGCTAAAGAGAATGATGTGGTACTGGTCGCGGGCAAAGGCCATGAAGATTACCAGATTGTTGGCAATCAGCGTCTGGACTACTCCGATCGCGTCACGGTGGCGCGTCTGCTGGGGGTGATTGCATGA", + "dna_sequence_length": 1488, + "functions": [ + "UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase" + ], + "id": "CDS_83", + "location": [ + [ + "NC_000913", + 93166, + "+", + 1488 + ] + ], + "md5": "8da8651a23fe898974b2e2f6727b4b8e", + "parent_gene": "", + "protein_md5": "e83511defef507348e5a9d02ae774102", + "protein_translation": "MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000313" + ], + [ + "gene_synonym", + "ECK0087" + ], + [ + "gene_synonym", + "EcoGene:EG10622" + ], + [ + "gene_synonym", + "GI:16128079" + ], + [ + "gene_synonym", + "GeneID:944813" + ], + [ + "gene_synonym", + "JW0084" + ], + [ + "gene_synonym", + "NP_414628.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11880" + ], + [ + "gene_synonym", + "b0086" + ], + [ + "gene_synonym", + "mra" + ], + [ + "gene_synonym", + "murF" + ] + ], + "dna_sequence": "ATGATTAGCGTAACCCTTAGCCAACTTACCGACATTCTCAACGGTGAACTGCAAGGTGCAGATATCACCCTTGATGCTGTAACCACTGATACCCGAAAACTGACGCCGGGCTGCCTGTTTGTTGCCCTGAAAGGCGAACGTTTTGATGCCCACGATTTTGCCGACCAGGCGAAAGCTGGCGGCGCAGGCGCACTACTGGTTAGCCGTCCGCTGGACATCGACCTGCCGCAGTTAATCGTCAAGGATACGCGTCTGGCGTTTGGTGAACTGGCTGCATGGGTTCGCCAGCAAGTTCCGGCGCGCGTGGTTGCTCTGACGGGGTCCTCCGGCAAAACCTCCGTTAAAGAGATGACGGCGGCGATTTTAAGCCAGTGCGGCAACACGCTTTATACGGCAGGCAATCTCAACAACGACATCGGTGTACCGATGACGCTGTTGCGCTTAACGCCGGAATACGATTACGCAGTTATTGAACTTGGCGCGAACCATCAGGGCGAAATAGCCTGGACTGTGAGTCTGACTCGCCCGGAAGCTGCGCTGGTCAACAACCTGGCAGCGGCGCATCTGGAAGGTTTTGGCTCGCTTGCGGGTGTCGCGAAAGCGAAAGGTGAAATCTTTAGCGGCCTGCCGGAAAACGGTATCGCCATTATGAACGCCGACAACAACGACTGGCTGAACTGGCAGAGCGTAATTGGCTCACGCAAAGTGTGGCGTTTCTCACCCAATGCCGCCAACAGCGATTTCACCGCCACCAATATCCATGTGACCTCGCACGGTACGGAATTTACCCTACAAACCCCAACCGGTAGCGTCGATGTTCTGCTGCCGTTGCCGGGGCGTCACAATATTGCGAATGCGCTGGCAGCCGCTGCGCTCTCCATGTCCGTGGGCGCAACGCTTGATGCTATCAAAGCGGGGCTGGCAAATCTGAAAGCTGTTCCAGGCCGTCTGTTCCCCATCCAACTGGCAGAAAACCAGTTGCTGCTCGACGACTCCTACAACGCCAATGTCGGTTCAATGACTGCAGCAGTCCAGGTACTGGCTGAAATGCCGGGCTACCGCGTGCTGGTGGTGGGCGATATGGCGGAACTGGGCGCTGAAAGCGAAGCCTGCCATGTACAGGTGGGCGAGGCGGCAAAAGCTGCTGGTATTGACCGCGTGTTAAGCGTGGGTAAACAAAGCCATGCTATCAGCACCGCCAGCGGCGTTGGCGAACATTTTGCTGATAAAACTGCGTTAATTACGCGTCTTAAATTACTGATTGCTGAGCAACAGGTAATTACGATTTTAGTTAAGGGTTCACGTAGTGCCGCCATGGAAGAGGTAGTACGCGCTTTACAGGAGAATGGGACATGTTAG", + "dna_sequence_length": 1359, + "functions": [ + "UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase" + ], + "id": "CDS_84", + "location": [ + [ + "NC_000913", + 94650, + "+", + 1359 + ] + ], + "md5": "1c43127648e1cadb5b68660780828f1b", + "parent_gene": "", + "protein_md5": "5396f3a33a06a69f91053c7c025f1ff8", + "protein_translation": "MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENGTC", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000316" + ], + [ + "gene_synonym", + "ECK0088" + ], + [ + "gene_synonym", + "EcoGene:EG10604" + ], + [ + "gene_synonym", + "GI:16128080" + ], + [ + "gene_synonym", + "GeneID:944814" + ], + [ + "gene_synonym", + "JW0085" + ], + [ + "gene_synonym", + "NP_414629.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W3" + ], + [ + "gene_synonym", + "b0087" + ], + [ + "gene_synonym", + "mraY" + ], + [ + "gene_synonym", + "murX" + ] + ], + "dna_sequence": "ATGTTAGTTTGGCTGGCCGAACATTTGGTCAAATATTATTCCGGCTTTAACGTCTTTTCCTATCTGACGTTTCGCGCCATCGTCAGCCTGCTGACCGCGCTGTTCATCTCATTGTGGATGGGCCCGCGTATGATTGCTCATTTGCAAAAACTTTCCTTTGGTCAGGTGGTGCGTAACGACGGTCCTGAATCACACTTCAGCAAGCGCGGTACGCCGACCATGGGCGGGATTATGATCCTGACGGCGATTGTGATCTCCGTACTGCTGTGGGCTTACCCGTCCAATCCGTACGTCTGGTGCGTGTTGGTGGTGCTGGTAGGTTACGGTGTTATTGGCTTTGTTGATGATTATCGCAAAGTGGTGCGTAAAGACACCAAAGGGTTGATCGCTCGTTGGAAGTATTTCTGGATGTCGGTCATTGCGCTGGGTGTCGCCTTCGCCCTGTACCTTGCCGGCAAAGACACGCCCGCAACGCAGCTGGTGGTCCCATTCTTTAAAGATGTGATGCCGCAGCTGGGGCTGTTCTACATTCTGCTGGCTTACTTCGTCATTGTGGGTACTGGCAACGCGGTAAACCTGACCGATGGTCTCGACGGCCTGGCAATTATGCCGACCGTATTTGTCGCCGGTGGTTTTGCGCTGGTGGCGTGGGCGACCGGCAATATGAACTTTGCCAGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGATGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAA", + "dna_sequence_length": 1083, + "functions": [ + "phospho-N-acetylmuramoyl-pentapeptide transferase" + ], + "id": "CDS_85", + "location": [ + [ + "NC_000913", + 96002, + "+", + 1083 + ] + ], + "md5": "69db3e7a6a35f2329f0732b6f37ebfcf", + "parent_gene": "", + "protein_md5": "9fc6a2249ccf26d2a5dd645ebb3f5e85", + "protein_translation": "MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", + "protein_translation_length": 360, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000318" + ], + [ + "gene_synonym", + "ECK0089" + ], + [ + "gene_synonym", + "EcoGene:EG10620" + ], + [ + "gene_synonym", + "GI:16128081" + ], + [ + "gene_synonym", + "GeneID:944818" + ], + [ + "gene_synonym", + "JW0086" + ], + [ + "gene_synonym", + "NP_414630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14900" + ], + [ + "gene_synonym", + "b0088" + ], + [ + "gene_synonym", + "murD" + ] + ], + "dna_sequence": "ATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGCTCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCTGGCCTGGATAAATTACCCGAAGCCGTAGAACGCCACACGGGCAGTCTGAATGATGAATGGCTGATGGCGGCAGATCTGATTGTCGCCAGTCCCGGTATTGCACTGGCGCATCCATCCTTAAGCGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGTCGCGAAGCACAAGCACCGATTGTGGCGATTACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACGTTGGTGTGGGTGGCAATATTGGCCTGCCTGCGTTGATGCTACTGGATGATGAGTGTGAACTGTACGTGCTGGAACTGTCGAGCTTCCAGCTGGAAACCACCTCCAGCTTACAGGCGGTAGCAGCGACCATTCTGAACGTGACTGAAGATCATATGGATCGCTATCCGTTTGGTTTACAACAGTATCGTGCAGCAAAACTGCGCATTTACGAAAACGCGAAAGTTTGCGTGGTTAATGCTGATGATGCCTTAACAATGCCGATTCGCGGTGCGGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTGAATCATCAGCAGGGCGAAACCTGGCTGCGGGTTAAAGGCGAGAAAGTGCTGAATGTGAAAGAGATGAAACTTTCCGGGCAGCATAACTACACCAATGCGCTGGCGGCGCTGGCGCTGGCAGATGCTGCAGGGTTACCGCGTGCCAGCAGCCTGAAAGCGTTAACCACATTCACTGGTCTGCCGCATCGCTTTGAAGTTGTGCTGGAGCATAACGGCGTACGTTGGATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACGTAGACGGCACACTGCATTTGTTGCTGGGTGGCGATGGTAAATCGGCGGACTTTAGCCCACTGGCGCGTTACCTGAATGGCGATAACGTACGTCTGTATTGTTTCGGTCGTGACGGCGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACTATGGAACAGGCGATGCGCTTGCTGGCTCCGCGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCAGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGGCAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA", + "dna_sequence_length": 1317, + "functions": [ + "UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase" + ], + "id": "CDS_86", + "location": [ + [ + "NC_000913", + 97087, + "+", + 1317 + ] + ], + "md5": "5eaa0bb6d7e1eac9d956ee6753b922f0", + "parent_gene": "", + "protein_md5": "8854d7953ec4e73de0c110b3373df75d", + "protein_translation": "MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG", + "protein_translation_length": 438, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000320" + ], + [ + "gene_synonym", + "ECK0090" + ], + [ + "gene_synonym", + "EcoGene:EG10344" + ], + [ + "gene_synonym", + "GI:16128082" + ], + [ + "gene_synonym", + "GeneID:946322" + ], + [ + "gene_synonym", + "JW0087" + ], + [ + "gene_synonym", + "NP_414631.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABG4" + ], + [ + "gene_synonym", + "b0089" + ], + [ + "gene_synonym", + "ftsW" + ] + ], + "dna_sequence": "ATGCGTTTATCTCTCCCTCGCCTGAAAATGCCGCGCCTGCCAGGATTCAGTATCCTGGTCTGGATCTCCACGGCGCTAAAGGGCTGGGTGATGGGCTCGCGGGAAAAAGATACCGACAGCCTGATCATGTACGATCGCACCTTACTGTGGCTGACCTTCGGCCTCGCGGCGATTGGCTTTATCATGGTGACCTCGGCGTCAATGCCCATAGGGCAACGCTTAACCAACGATCCGTTCTTCTTCGCGAAGCGTGATGGTGTCTATCTGATTTTGGCGTTTATTCTGGCGATCATTACGCTGCGTCTGCCGATGGAGTTCTGGCAACGCTACAGTGCCACGATGCTGCTCGGATCTATCATCCTGCTGATGATCGTCCTGGTAGTGGGTAGCTCGGTTAAAGGGGCATCGCGTTGGATCGATCTCGGTTTGCTGCGTATCCAGCCTGCGGAGCTGACAAAACTGTCGCTGTTTTGCTATATCGCCAACTATCTGGTGCGTAAAGGCGACGAAGTACGTAATAACCTGCGCGGCTTCCTGAAACCGATGGGCGTGATTCTGGTGTTGGCAGTGTTACTGCTGGCACAGCCAGACCTTGGTACGGTGGTGGTGTTGTTTGTGACTACGCTGGCGATGTTGTTCCTGGCGGGAGCGAAATTGTGGCAGTTCATTGCCATTATCGGTATGGGCATTTCAGCGGTTGTGTTGCTGATACTCGCCGAACCGTACCGTATCCGCCGTGTTACCGCATTCTGGAACCCGTGGGAAGATCCCTTTGGCAGCGGCTATCAGTTAACGCAATCGCTGATGGCGTTTGGTCGCGGCGAACTTTGGGGGCAAGGTTTAGGTAACTCGGTACAAAAACTGGAGTATCTGCCGGAAGCGCACACTGACTTTATTTTCGCCATTATCGGCGAAGAACTGGGGTATGTCGGTGTGGTGCTGGCACTTTTAATGGTATTCTTCGTCGCTTTTCGCGCGATGTCGATTGGCCGTAAAGCATTAGAAATTGACCACCGTTTTTCCGGTTTTCTCGCCTGTTCTATTGGCATCTGGTTTAGCTTCCAGGCGCTGGTTAACGTAGGCGCGGCGGCGGGGATGTTACCGACCAAAGGTCTGACATTGCCGCTGATCAGTTACGGTGGTTCGAGCTTACTGATTATGTCGACAGCCATCATGATGCTGTTGCGTATTGATTATGAAACGCGTCTGGAGAAAGCGCAGGCGTTTGTACGAGGTTCACGATGA", + "dna_sequence_length": 1245, + "functions": [ + "putative lipid II flippase", + "integral membrane protein", + "FtsZ ring stabilizer" + ], + "id": "CDS_87", + "location": [ + [ + "NC_000913", + 98403, + "+", + 1245 + ] + ], + "md5": "13b4aec72819979696354c126e6c976e", + "parent_gene": "", + "protein_md5": "80169ac40b04644e64f19b23f346f32f", + "protein_translation": "MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMYDRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRLPMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYIANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGELWGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMMLLRIDYETRLEKAQAFVRGSR", + "protein_translation_length": 414, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000322" + ], + [ + "gene_synonym", + "ECK0091" + ], + [ + "gene_synonym", + "EcoGene:EG10623" + ], + [ + "gene_synonym", + "GI:16128083" + ], + [ + "gene_synonym", + "GeneID:946321" + ], + [ + "gene_synonym", + "JW0088" + ], + [ + "gene_synonym", + "NP_414632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17443" + ], + [ + "gene_synonym", + "b0090" + ], + [ + "gene_synonym", + "murG" + ] + ], + "dna_sequence": "ATGAGTGGTCAAGGAAAGCGATTAATGGTGATGGCAGGCGGAACCGGTGGACATGTATTCCCGGGACTGGCGGTTGCGCACCATCTAATGGCTCAGGGTTGGCAAGTTCGCTGGCTGGGGACTGCCGACCGTATGGAAGCGGACTTAGTGCCAAAACATGGCATCGAAATTGATTTCATTCGTATCTCTGGTCTGCGTGGAAAAGGTATAAAAGCACTGATAGCTGCCCCGCTGCGTATCTTCAACGCCTGGCGTCAGGCGCGGGCGATTATGAAAGCGTACAAACCTGACGTGGTGCTCGGTATGGGAGGCTACGTGTCAGGTCCAGGTGGTCTGGCCGCGTGGTCGTTAGGCATTCCGGTTGTACTTCATGAACAAAACGGTATTGCGGGCTTAACCAATAAATGGCTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCCGTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAACGCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCAAATGAAGTGAGCCGGGTTGCCCGGGCGTAA", + "dna_sequence_length": 1068, + "functions": [ + "N-acetylglucosaminyl transferase" + ], + "id": "CDS_88", + "location": [ + [ + "NC_000913", + 99644, + "+", + 1068 + ] + ], + "md5": "436ea6ece80c781e51efcc299bb820b5", + "parent_gene": "", + "protein_md5": "a3ca7531d4c383960ac3b072581ef9e0", + "protein_translation": "MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARA", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000324" + ], + [ + "gene_synonym", + "ECK0092" + ], + [ + "gene_synonym", + "EcoGene:EG10619" + ], + [ + "gene_synonym", + "GI:16128084" + ], + [ + "gene_synonym", + "GeneID:946153" + ], + [ + "gene_synonym", + "JW0089" + ], + [ + "gene_synonym", + "NP_414633.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17952" + ], + [ + "gene_synonym", + "b0091" + ], + [ + "gene_synonym", + "murC" + ] + ], + "dna_sequence": "ATGAATACACAACAATTGGCAAAACTGCGTTCCATCGTGCCCGAAATGCGTCGCGTTCGGCACATACATTTTGTCGGCATTGGTGGTGCCGGTATGGGCGGTATTGCCGAAGTTCTGGCCAATGAAGGTTATCAGATCAGTGGTTCCGATTTAGCGCCAAATCCGGTCACGCAGCAGTTAATGAATCTGGGTGCGACGATTTATTTCAACCATCGCCCGGAAAACGTACGTGATGCCAGCGTGGTCGTTGTTTCCAGCGCGATTTCTGCCGATAACCCGGAAATTGTCGCCGCTCATGAAGCGCGTATTCCGGTGATCCGTCGTGCCGAAATGCTGGCTGAGTTAATGCGTTTTCGTCATGGCATCGCCATTGCCGGAACGCACGGCAAAACGACAACCACCGCGATGGTTTCCAGCATCTACGCAGAAGCGGGGCTCGACCCAACCTTCGTTAACGGCGGGCTGGTAAAAGCGGCGGGGGTTCATGCGCGTTTGGGGCATGGTCGGTACCTGATTGCCGAAGCAGATGAGAGTGATGCATCGTTCCTGCATCTGCAACCGATGGTGGCGATTGTCACCAATATCGAAGCCGACCACATGGATACCTACCAGGGCGACTTTGAGAATTTAAAACAGACTTTTATTAATTTTCTGCACAACCTGCCGTTTTACGGTCGTGCGGTGATGTGTGTTGATGATCCGGTGATCCGCGAATTGTTACCGCGAGTGGGGCGTCAGACCACGACTTACGGCTTCAGCGAAGATGCCGACGTGCGTGTAGAAGATTATCAGCAGATTGGCCCGCAGGGGCACTTTACGCTGCTGCGCCAGGACAAAGAGCCGATGCGCGTCACCCTGAATGCGCCAGGTCGTCATAACGCGCTGAACGCCGCAGCTGCGGTTGCGGTTGCTACGGAAGAGGGCATTGACGACGAGGCTATTTTGCGGGCGCTTGAAAGCTTCCAGGGGACTGGTCGCCGTTTTGATTTCCTCGGTGAATTCCCGCTGGAGCCAGTGAATGGTAAAAGCGGTACGGCAATGCTGGTCGATGACTACGGCCACCACCCGACGGAAGTGGACGCCACCATTAAAGCGGCGCGCGCAGGCTGGCCGGATAAAAACCTGGTAATGCTGTTTCAGCCGCACCGTTTTACCCGTACGCGCGACCTGTATGATGATTTCGCCAATGTGCTGACGCAGGTTGATACCCTGTTGATGCTGGAAGTGTATCCGGCTGGCGAAGCGCCAATTCCGGGAGCGGACAGCCGTTCGCTGTGTCGCACAATTCGTGGACGTGGGAAAATTGATCCCATTCTGGTGCCGGATCCGGCGCGGGTAGCCGAGATGCTGGCACCGGTATTAACCGGTAACGACCTGATTCTCGTTCAGGGGGCTGGTAATATTGGAAAAATTGCCCGTTCTTTAGCTGAAATCAAACTGAAGCCGCAAACTCCGGAGGAAGAACAACATGACTGA", + "dna_sequence_length": 1476, + "functions": [ + "UDP-N-acetylmuramate:L-alanine ligase" + ], + "id": "CDS_89", + "location": [ + [ + "NC_000913", + 100765, + "+", + 1476 + ] + ], + "md5": "c55f638e1f4db59729d0144ac0ae37cf", + "parent_gene": "", + "protein_md5": "21aba3a2a5bc6bc345078a518cfd0e17", + "protein_translation": "MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000326" + ], + [ + "gene_synonym", + "ECK0093" + ], + [ + "gene_synonym", + "EcoGene:EG10214" + ], + [ + "gene_synonym", + "GI:16128085" + ], + [ + "gene_synonym", + "GeneID:946324" + ], + [ + "gene_synonym", + "JW0090" + ], + [ + "gene_synonym", + "NP_414634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07862" + ], + [ + "gene_synonym", + "b0092" + ], + [ + "gene_synonym", + "ddl" + ], + [ + "gene_synonym", + "ddlB" + ] + ], + "dna_sequence": "ATGACTGATAAAATCGCGGTCCTGTTGGGTGGGACCTCCGCTGAGCGGGAAGTTTCTCTGAATTCTGGCGCAGCGGTGTTAGCCGGACTGCGTGAAGGCGGTATTGACGCGTATCCTGTCGACCCGAAAGAAGTCGACGTGACGCAACTGAAGTCGATGGGCTTTCAGAAAGTGTTTATCGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGCAGAGTTTGAAAAAGGCCTGAGCGATAAGCAGTTAGCAGAAATTTCTGCTCTGGGTTTGCCGGTTATCGTTAAGCCGAGCCGCGAAGGTTCCAGTGTGGGAATGTCAAAAGTAGTAGCAGAAAATGCTCTACAAGATGCATTAAGATTGGCATTTCAGCACGATGAAGAAGTATTGATTGAAAAATGGCTAAGTGGGCCGGAGTTCACGGTTGCGATACTCGGTGAAGAAATTTTACCGTCAATACGTATTCAACCGTCCGGAACCTTCTATGATTATGAGGCGAAGTATCTCTCTGATGAGACACAGTATTTCTGCCCCGCAGGTCTGGAAGCGTCACAAGAGGCCAATTTGCAGGCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAA", + "dna_sequence_length": 921, + "functions": [ + "D-alanine:D-alanine ligase" + ], + "id": "CDS_90", + "location": [ + [ + "NC_000913", + 102233, + "+", + 921 + ] + ], + "md5": "ee3cc820d83220e0cbe878dc1564cc51", + "parent_gene": "", + "protein_md5": "54e611311e0e2a239edc3e7c5749607a", + "protein_translation": "MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILELAD", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000329" + ], + [ + "gene_synonym", + "ECK0094" + ], + [ + "gene_synonym", + "EcoGene:EG10342" + ], + [ + "gene_synonym", + "GI:16128086" + ], + [ + "gene_synonym", + "GeneID:944823" + ], + [ + "gene_synonym", + "JW0091" + ], + [ + "gene_synonym", + "NP_414635.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06136" + ], + [ + "gene_synonym", + "b0093" + ], + [ + "gene_synonym", + "ftsQ" + ] + ], + "dna_sequence": "ATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTCGCCGCAATAATGGAACGCGTCTGGCGGGGATCCTTTTCCTGCTGACCGTTTTAACGACAGTGTTGGTGAGCGGCTGGGTCGTGTTGGGCTGGATGGAAGATGCGCAACGCCTGCCGCTCTCAAAGCTGGTGTTGACCGGTGAACGCCATTACACACGTAATGACGATATCCGGCAGTCGATCCTGGCATTGGGTGAGCCGGGTACCTTTATGACCCAGGATGTCAACATCATCCAGACGCAAATAGAACAACGCCTGCCGTGGATTAAGCAGGTGAGCGTCAGAAAGCAGTGGCCTGATGAATTGAAGATTCATCTGGTTGAATATGTGCCGATTGCGCGGTGGAATGATCAACATATGGTAGACGCGGAAGGAAATACCTTCAGCGTGCCGCCAGAACGCACCAGCAAGCAGGTGCTTCCAATGCTGTATGGCCCGGAAGGCAGCGCCAATGAAGTGTTGCAGGGCTATCGCGAAATGGGGCAGATGCTGGCAAAGGACAGATTTACTCTGAAGGAAGCGGCGATGACCGCGCGGCGTTCCTGGCAGTTGACGCTGAATAACGATATTAAGCTCAATCTTGGCCGGGGCGATACGATGAAACGTTTGGCTCGCTTTGTAGAACTTTATCCGGTTTTACAGCAGCAGGCGCAAACCGATGGCAAACGGATTAGCTACGTTGATTTGCGTTATGACTCTGGAGCGGCAGTAGGCTGGGCGCCCTTGCCGCCAGAGGAATCTACTCAGCAACAAAATCAGGCACAGGCAGAACAACAATGA", + "dna_sequence_length": 831, + "functions": [ + "divisome assembly protein, membrane anchored protein involved in growth of wall at septum" + ], + "id": "CDS_91", + "location": [ + [ + "NC_000913", + 103155, + "+", + 831 + ] + ], + "md5": "15bdd6f4abdf4de8eed1980c349d5735", + "parent_gene": "", + "protein_md5": "89c302565302e97261ffc4ee483d4770", + "protein_translation": "MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000331" + ], + [ + "gene_synonym", + "ECK0095" + ], + [ + "gene_synonym", + "EcoGene:EG10339" + ], + [ + "gene_synonym", + "GI:16128087" + ], + [ + "gene_synonym", + "GeneID:944778" + ], + [ + "gene_synonym", + "JW0092" + ], + [ + "gene_synonym", + "NP_414636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH0" + ], + [ + "gene_synonym", + "b0094" + ], + [ + "gene_synonym", + "divA" + ], + [ + "gene_synonym", + "ftsA" + ] + ], + "dna_sequence": "ATGATCAAGGCGACGGACAGAAAACTGGTAGTAGGACTGGAGATTGGTACCGCGAAGGTTGCCGCTTTAGTAGGGGAAGTTCTGCCCGACGGTATGGTCAATATCATTGGCGTGGGCAGCTGCCCGTCGCGTGGTATGGATAAAGGCGGGGTGAACGACCTCGAATCCGTGGTCAAGTGCGTACAACGCGCCATTGACCAGGCAGAATTGATGGCAGATTGTCAGATCTCTTCGGTATATCTGGCGCTTTCTGGTAAGCACATCAGCTGCCAGAATGAAATTGGTATGGTGCCTATTTCTGAAGAAGAAGTGACGCAAGAAGATGTGGAAAACGTCGTCCATACCGCGAAATCGGTGCGTGTGCGCGATGAGCATCGTGTGCTGCATGTGATCCCGCAAGAGTATGCGATTGACTATCAGGAAGGGATCAAGAATCCGGTAGGACTTTCGGGCGTGCGGATGCAGGCAAAAGTGCACCTGATCACATGTCACAACGATATGGCGAAAAACATCGTCAAAGCGGTTGAACGTTGTGGGCTGAAAGTTGACCAACTGATATTTGCCGGACTGGCATCAAGTTATTCGGTATTGACGGAAGATGAACGTGAACTGGGTGTCTGCGTCGTCGATATCGGTGGTGGTACAATGGATATCGCCGTTTATACCGGTGGGGCATTGCGCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTGCAACGTCAGACACTGGCAGAGGTGATCGAGCCGCGCTATACCGAGCTGCTCAACCTGGTCAACGAAGAGATATTGCAGTTGCAGGAAAAGCTTCGCCAACAAGGGGTTAAACATCACCTGGCGGCAGGCATTGTATTAACCGGTGGCGCAGCGCAGATCGAAGGTCTTGCAGCCTGTGCTCAGCGCGTGTTTCATACGCAAGTGCGTATCGGCGCGCCGCTGAACATTACCGGTTTAACGGATTATGCTCAGGAGCCGTATTATTCGACGGCGGTGGGATTGCTTCACTATGGGAAAGAGTCACATCTTAACGGTGAAGCTGAAGTAGAAAAACGTGTTACAGCATCAGTTGGCTCGTGGATCAAGCGACTCAATAGTTGGCTGCGAAAAGAGTTTTAA", + "dna_sequence_length": 1263, + "functions": [ + "ATP-binding cell division FtsK recruitment protein" + ], + "id": "CDS_92", + "location": [ + [ + "NC_000913", + 103982, + "+", + 1263 + ] + ], + "md5": "11dc6acb6fea7e7bafa683e853ede326", + "parent_gene": "", + "protein_md5": "7b58e674ba3dcc106ceb417c9db138f7", + "protein_translation": "MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDIAVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLNGEAEVEKRVTASVGSWIKRLNSWLRKEF", + "protein_translation_length": 420, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000333" + ], + [ + "gene_synonym", + "ECK0096" + ], + [ + "gene_synonym", + "EcoGene:EG10347" + ], + [ + "gene_synonym", + "GI:16128088" + ], + [ + "gene_synonym", + "GeneID:944786" + ], + [ + "gene_synonym", + "JW0093" + ], + [ + "gene_synonym", + "NP_414637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9A6" + ], + [ + "gene_synonym", + "b0095" + ], + [ + "gene_synonym", + "ftsZ" + ], + [ + "gene_synonym", + "sfiB" + ], + [ + "gene_synonym", + "sulB" + ] + ], + "dna_sequence": "ATGTTTGAACCAATGGAACTTACCAATGACGCGGTGATTAAAGTCATCGGCGTCGGCGGCGGCGGCGGTAATGCTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATGCATTGCGTGCGGCGCTGGAAGGTGCAGACATGGTCTTTATTGCTGCGGGTATGGGTGGTGGTACCGGTACAGGTGCAGCACCAGTCGTCGCTGAAGTGGCAAAAGATTTGGGTATCCTGACCGTTGCTGTCGTCACTAAGCCTTTCAACTTTGAAGGCAAGAAGCGTATGGCATTCGCGGAGCAGGGGATCACTGAACTGTCCAAGCATGTGGACTCTCTGATCACTATCCCGAACGACAAACTGCTGAAAGTTCTGGGCCGCGGTATCTCCCTGCTGGATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGTGCAAGGTATCGCTGAACTGATTACTCGTCCGGGTTTGATGAACGTGGACTTTGCAGACGTACGCACCGTAATGTCTGAGATGGGCTACGCAATGATGGGTTCTGGCGTGGCGAGCGGTGAAGACCGTGCGGAAGAAGCTGCTGAAATGGCTATCTCTTCTCCGCTGCTGGAAGATATCGACCTGTCTGGCGCGCGCGGCGTGCTGGTTAACATCACGGCGGGCTTCGACCTGCGTCTGGATGAGTTCGAAACGGTAGGTAACACCATCCGTGCATTTGCTTCCGACAACGCGACTGTGGTTATCGGTACTTCTCTTGACCCGGATATGAATGACGAGCTGCGCGTAACCGTTGTTGCGACAGGTATCGGCATGGACAAACGTCCTGAAATCACTCTGGTGACCAATAAGCAGGTTCAGCAGCCAGTGATGGATCGCTACCAGCAGCATGGGATGGCTCCGCTGACCCAGGAGCAGAAGCCGGTTGCTAAAGTCGTGAATGACAATGCGCCGCAAACTGCGAAAGAGCCGGATTATCTGGATATCCCAGCATTCCTGCGTAAGCAAGCTGATTAA", + "dna_sequence_length": 1152, + "functions": [ + "GTP-binding tubulin-like cell division protein" + ], + "id": "CDS_93", + "location": [ + [ + "NC_000913", + 105305, + "+", + 1152 + ] + ], + "md5": "55eb34f75d02478f037a30712574446f", + "parent_gene": "", + "protein_md5": "c16a16e243d432912840fefd5939be2e", + "protein_translation": "MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQPVMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000336" + ], + [ + "gene_synonym", + "ECK0097" + ], + [ + "gene_synonym", + "EcoGene:EG10265" + ], + [ + "gene_synonym", + "GI:16128089" + ], + [ + "gene_synonym", + "GeneID:944816" + ], + [ + "gene_synonym", + "JW0094" + ], + [ + "gene_synonym", + "NP_414638.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A725" + ], + [ + "gene_synonym", + "asmB" + ], + [ + "gene_synonym", + "b0096" + ], + [ + "gene_synonym", + "envA" + ], + [ + "gene_synonym", + "lpxC" + ] + ], + "dna_sequence": "ATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTGCGCCGGCCAACACCGGGGTCATCTATCGTCGCACCGACTTGAATCCACCGGTAGATTTCCCGGCCGATGCCAAATCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGTGGGCTGAATTTAAGCCGTACAATGGTTTTTCGCTGGATTTCACCATCGATTTTAACCATCCGGCTATTGATTCCAGCAACCAGCGCTATGCGATGAACTTCTCCGCTGATGCGTTTATGCGCCAGATCAGCCGTGCGCGTACGTTCGGTTTCATGCGTGATATCGAATATCTGCAGTCCCGTGGTTTGTGCCTGGGCGGCAGCTTCGATTGTGCCATCGTTGTTGACGATTATCGCGTACTGAACGAAGACGGCCTGCGTTTTGAAGACGAATTTGTGCGTCACAAAATGCTCGATGCGATCGGTGACTTGTTCATGTGTGGTCACAATATTATTGGTGCATTTACCGCTTATAAATCCGGTCATGCACTGAATAACAAACTGCTGCAGGCTGTCCTGGCGAAACAGGAAGCCTGGGAATATGTGACCTTCCAGGACGACGCAGAACTGCCGTTGGCCTTCAAAGCGCCTTCAGCTGTACTGGCATAA", + "dna_sequence_length": 918, + "functions": [ + "UDP-3-O-acyl N-acetylglucosamine deacetylase" + ], + "id": "CDS_94", + "location": [ + [ + "NC_000913", + 106557, + "+", + 918 + ] + ], + "md5": "8cc8f216b32e59b77f0431f02fd253e2", + "parent_gene": "", + "protein_md5": "bf027aecde1ae723b927b94a26fa4936", + "protein_translation": "MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAPSAVLA", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000340" + ], + [ + "gene_synonym", + "ECK0098" + ], + [ + "gene_synonym", + "EcoGene:EG11087" + ], + [ + "gene_synonym", + "GI:90111085" + ], + [ + "gene_synonym", + "GeneID:944831" + ], + [ + "gene_synonym", + "JW5007" + ], + [ + "gene_synonym", + "NP_414639.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62395" + ], + [ + "gene_synonym", + "b0097" + ], + [ + "gene_synonym", + "secM" + ], + [ + "gene_synonym", + "srrA" + ], + [ + "gene_synonym", + "yacA" + ] + ], + "dna_sequence": "GTGAGTGGAATACTGACGCGCTGGCGACAGTTTGGTAAACGCTACTTCTGGCCGCATCTCTTATTAGGGATGGTTGCGGCGAGTTTAGGTTTGCCTGCGCTCAGCAACGCCGCCGAACCAAACGCGCCCGCAAAAGCGACAACCCGCAACCACGAGCCTTCAGCCAAAGTTAACTTTGGTCAATTGGCCTTGCTGGAAGCGAACACACGCCGCCCGAATTCGAACTATTCCGTTGATTACTGGCATCAACATGCCATTCGCACGGTAATCCGTCATCTTTCTTTCGCAATGGCACCGCAAACACTGCCCGTTGCTGAAGAATCTTTGCCTCTTCAGGCGCAACATCTTGCATTACTGGATACGCTCAGCGCGCTGCTGACCCAGGAAGGCACGCCGTCTGAAAAGGGTTATCGCATTGATTATGCGCATTTTACCCCACAAGCAAAATTCAGCACGCCCGTCTGGATAAGCCAGGCGCAAGGCATCCGTGCTGGCCCTCAACGCCTCACCTAA", + "dna_sequence_length": 513, + "functions": [ + "regulator of secA translation" + ], + "id": "CDS_95", + "location": [ + [ + "NC_000913", + 107705, + "+", + 513 + ] + ], + "md5": "414b28294691670ed4aa4f021be4d632", + "parent_gene": "", + "protein_md5": "4ee14dd4c0d3b2ce82ead84838f87235", + "protein_translation": "MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT", + "protein_translation_length": 170, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000343" + ], + [ + "gene_synonym", + "ECK0099" + ], + [ + "gene_synonym", + "EcoGene:EG10936" + ], + [ + "gene_synonym", + "GI:16128091" + ], + [ + "gene_synonym", + "GeneID:944821" + ], + [ + "gene_synonym", + "JW0096" + ], + [ + "gene_synonym", + "NP_414640.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10408" + ], + [ + "gene_synonym", + "azi" + ], + [ + "gene_synonym", + "b0098" + ], + [ + "gene_synonym", + "pea" + ], + [ + "gene_synonym", + "prlD" + ], + [ + "gene_synonym", + "secA" + ] + ], + "dna_sequence": "ATGCTAATCAAATTGTTAACTAAAGTTTTCGGTAGTCGTAACGATCGCACCCTGCGCCGGATGCGCAAAGTGGTCAACATCATCAATGCCATGGAACCGGAGATGGAAAAACTCTCCGACGAAGAACTGAAAGGGAAAACCGCAGAGTTTCGTGCACGTCTGGAAAAAGGCGAAGTGCTGGAAAATCTGATCCCGGAAGCTTTCGCCGTGGTACGTGAGGCAAGTAAGCGCGTCTTTGGTATGCGTCACTTCGACGTTCAGTTACTCGGCGGTATGGTTCTTAACGAACGCTGCATCGCCGAAATGCGTACCGGTGAAGGAAAAACCCTGACCGCAACGCTGCCTGCTTACCTGAACGCACTAACCGGTAAAGGCGTGCACGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGCGTTCAGCCCTGAAGAACGTGTACAGCGTAAACTGCACTATGCGCTGGTGGACGAAGTGGACTCCATCCTGATCGATGAAGCGCGTACACCGCTGATCATTTCCGGCCCGGCAGAAGACAGCTCGGAAATGTATAAACGCGTGAATAAAATTATTCCGCACCTGATCCGTCAGGAAAAAGAAGACTCCGAAACCTTCCAGGGCGAAGGCCACTTCTCGGTGGACGAAAAATCTCGCCAGGTGAACCTGACCGAACGTGGTCTGGTGCTGATTGAAGAACTGCTGGTGAAAGAGGGCATCATGGATGAAGGGGAGTCTCTGTACTCTCCGGCCAACATCATGCTGATGCACCACGTAACGGCGGCGCTGCGCGCTCATGCGCTGTTTACCCGTGACGTCGACTACATCGTTAAAGATGGTGAAGTTATCATCGTTGACGAACACACCGGTCGTACCATGCAGGGCCGTCGCTGGTCCGATGGTCTGCACCAGGCTGTGGAAGCGAAAGAAGGTGTGCAGATCCAGAACGAAAACCAAACGCTGGCTTCGATCACCTTCCAGAACTACTTCCGTCTGTATGAAAAACTGGCGGGGATGACCGGTACTGCTGATACCGAAGCTTTCGAATTTAGCTCAATCTACAAGCTGGATACCGTCGTTGTTCCGACCAACCGTCCAATGATTCGTAAAGATCTGCCGGACCTGGTCTACATGACTGAAGCGGAAAAAATTCAGGCGATCATTGAAGATATCAAAGAACGTACTGCGAAAGGCCAGCCGGTGCTGGTGGGTACTATCTCCATCGAAAAATCGGAGCTGGTGTCAAACGAACTGACCAAAGCCGGTATTAAGCACAACGTCCTGAACGCCAAATTCCACGCCAACGAAGCGGCGATTGTTGCTCAGGCAGGTTATCCGGCTGCGGTGACTATCGCGACCAATATGGCGGGTCGTGGTACAGATATTGTGCTCGGTGGTAGCTGGCAGGCAGAAGTTGCCGCGCTGGAAAATCCGACCGCAGAGCAAATTGAAAAAATTAAAGCCGACTGGCAGGTACGTCACGATGCGGTACTGGAAGCAGGTGGCCTGCATATCATCGGTACCGAGCGTCACGAATCCCGTCGTATCGATAACCAGTTGCGCGGTCGTTCTGGTCGTCAGGGGGATGCTGGTTCTTCCCGTTTCTACCTGTCGATGGAAGATGCGCTGATGCGTATTTTTGCTTCCGACCGAGTATCCGGCATGATGCGTAAACTGGGTATGAAGCCAGGCGAAGCCATTGAACACCCGTGGGTGACTAAAGCGATTGCCAACGCCCAGCGTAAAGTTGAAAGCCGTAACTTCGACATTCGTAAGCAACTGCTGGAATATGATGACGTGGCTAACGATCAGCGTCGCGCCATTTACTCCCAGCGTAACGAACTGTTGGATGTCAGCGATGTGAGCGAAACCATTAACAGCATTCGTGAAGATGTGTTCAAAGCGACCATTGATGCCTACATTCCACCACAGTCGCTGGAAGAAATGTGGGATATTCCGGGGCTGCAGGAACGTCTGAAGAACGATTTCGACCTCGATTTGCCAATTGCCGAGTGGCTGGATAAAGAACCAGAACTGCATGAAGAGACGCTGCGTGAGCGCATTCTGGCGCAGTCCATCGAAGTGTATCAGCGTAAAGAAGAAGTGGTTGGTGCTGAGATGATGCGTCACTTCGAGAAAGGCGTCATGCTGCAAACGCTTGACTCCCTGTGGAAAGAGCACCTGGCAGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTGAAGAGGTTGAGGAGCTGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCGCAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTGCCATGGCCGCCTGCAATAA", + "dna_sequence_length": 2706, + "functions": [ + "preprotein translocase subunit, ATPase" + ], + "id": "CDS_96", + "location": [ + [ + "NC_000913", + 108279, + "+", + 2706 + ] + ], + "md5": "70f5bf351f6f3337efe1c38ff1ae3ed4", + "parent_gene": "", + "protein_md5": "1baad8fe077050f7097e1f3d00a93ace", + "protein_translation": "MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ", + "protein_translation_length": 901, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000346" + ], + [ + "gene_synonym", + "ECK0100" + ], + [ + "gene_synonym", + "EcoGene:EG10626" + ], + [ + "gene_synonym", + "GI:16128092" + ], + [ + "gene_synonym", + "GeneID:944824" + ], + [ + "gene_synonym", + "JW0097" + ], + [ + "gene_synonym", + "NP_414641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08337" + ], + [ + "gene_synonym", + "b0099" + ], + [ + "gene_synonym", + "mutT" + ], + [ + "gene_synonym", + "nudA" + ] + ], + "dna_sequence": "ATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATGAATTCCCGGACAGGCATATAACACTGTGGTTTTGGCTGGTCGAACGCTGGGAAGGGGAGCCGTGGGGTAAAGAAGGGCAACCCGGTGAGTGGATGTCGCTGGTCGGTCTTAATGCCGATGATTTTCCGCCAGCCAATGAACCGGTAATTGCGAAGCTTAAACGTCTGTAG", + "dna_sequence_length": 390, + "functions": [ + "dGTP-preferring nucleoside triphosphate pyrophosphohydrolase" + ], + "id": "CDS_97", + "location": [ + [ + "NC_000913", + 111044, + "+", + 390 + ] + ], + "md5": "8789f83263e9dd6dd4ed3edd39ceef89", + "parent_gene": "", + "protein_md5": "ad01a70ae0aa1d45b730f946fb47abfd", + "protein_translation": "MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPGEWMSLVGLNADDFPPANEPVIAKLKRL", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000351" + ], + [ + "gene_synonym", + "ECK0101" + ], + [ + "gene_synonym", + "EcoGene:EG12314" + ], + [ + "gene_synonym", + "GI:16128094" + ], + [ + "gene_synonym", + "GeneID:945630" + ], + [ + "gene_synonym", + "JW5008" + ], + [ + "gene_synonym", + "NP_414643.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8H8" + ], + [ + "gene_synonym", + "b0101" + ], + [ + "gene_synonym", + "yacG" + ] + ], + "dna_sequence": "ATGTCAGAAACTATTACGGTGAATTGCCCAACCTGCGGGAAAACGGTGGTGTGGGGTGAAATCAGCCCGTTTCGGCCATTTTGCTCCAAACGTTGTCAGCTGATCGACCTCGGAGAATGGGCTGCTGAAGAAAAACGAATCCCCAGCAGTGGCGATCTTTCCGAAAGCGATGACTGGAGCGAAGAACCAAAGCAGTGA", + "dna_sequence_length": 198, + "functions": [ + "DNA gyrase inhibitor" + ], + "id": "CDS_98", + "location": [ + [ + "NC_000913", + 111846, + "-", + 198 + ] + ], + "md5": "3be08b0c49a9fc5195dc716af0560f0d", + "parent_gene": "", + "protein_md5": "389a5dad656b70da31de26225cbe2bab", + "protein_translation": "MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWSEEPKQ", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000355" + ], + [ + "gene_synonym", + "ECK0102" + ], + [ + "gene_synonym", + "EcoGene:EG12313" + ], + [ + "gene_synonym", + "GI:16128095" + ], + [ + "gene_synonym", + "GeneID:944873" + ], + [ + "gene_synonym", + "JW0099" + ], + [ + "gene_synonym", + "NP_414644.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36680" + ], + [ + "gene_synonym", + "b0102" + ], + [ + "gene_synonym", + "yacF" + ], + [ + "gene_synonym", + "zapD" + ] + ], + "dna_sequence": "ATGCAGACCCAGGTCCTTTTTGAACATCCACTAAATGAAAAAATGCGTACATGGCTGCGCATTGAGTTTTTGATTCAGCAACTCACCGTTAATTTACCCATCGTTGACCACGCTGGCGCGCTGCATTTCTTCCGTAATGTCAGTGAATTACTGGATGTTTTCGAGCGCGGCGAAGTCCGCACTGAGCTGTTGAAAGAACTTGACCGGCAGCAACGTAAACTCCAGACCTGGATTGGCGTGCCTGGCGTGGACCAGAGCCGTATTGAAGCATTAATTCAGCAGTTAAAAGCGGCGGGGAGCGTATTAATTTCCGCGCCGCGTATCGGGCAATTTCTGCGTGAAGATCGTTTGATTGCTCTGGTGCGTCAGCGACTGAGCATCCCAGGCGGCTGTTGCAGCTTTGATTTACCTACATTGCACATTTGGCTGCATCTACCCCAGGCGCAGCGCGACAGCCAGGTAGAAACCTGGATTGCCAGCCTGAACCCGCTCACCCAGGCACTTACCATGGTGCTGGATTTAATTCGCCAGTCGGCCCCCTTCCGTAAACAAACCAGCCTGAATGGTTTTTATCAGGATAACGGTGGCGATGCCGACTTGCTGCGCCTGAATCTGTCGCTCGATTCACAGCTTTATCCGCAAATTTCCGGACATAAGAGCCGTTTTGCCATTCGTTTTATGCCGCTGGACACTGAAAACGGACAGGTACCGGAACGTCTGGATTTCGAACTGGCCTGTTGCTAA", + "dna_sequence_length": 744, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_99", + "location": [ + [ + "NC_000913", + 112599, + "-", + 744 + ] + ], + "md5": "a8abc1c4a902792b59d8b5dd2a343bd1", + "parent_gene": "", + "protein_md5": "5403583dde618abfb0e97a384af9b5da", + "protein_translation": "MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000357" + ], + [ + "gene_synonym", + "ECK0103" + ], + [ + "gene_synonym", + "EcoGene:EG12312" + ], + [ + "gene_synonym", + "GI:16128096" + ], + [ + "gene_synonym", + "GeneID:949060" + ], + [ + "gene_synonym", + "JW0100" + ], + [ + "gene_synonym", + "NP_414645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6I9" + ], + [ + "gene_synonym", + "b0103" + ], + [ + "gene_synonym", + "coaE" + ], + [ + "gene_synonym", + "yacE" + ] + ], + "dna_sequence": "ATGAGGTATATAGTTGCCTTAACGGGAGGCATTGGCAGTGGCAAGAGTACCGTTGCCAATGCGTTTGCTGATCTCGGAATTAACGTCATTGATGCCGATATTATTGCGCGTCAGGTGGTTGAACCAGGTGCACCTGCGCTACATGCCATTGCTGATCACTTTGGCGCTAACATGATTGCTGCTGATGGAACATTGCAGCGCCGGGCCTTGCGCGAGCGGATCTTCGCCAACCCGGAAGAGAAAAACTGGCTTAACGCCCTGCTGCATCCGCTGATTCAGCAAGAGACGCAACACCAGATCCAGCAAGCTACTTCCCCCTATGTACTGTGGGTTGTGCCATTGCTGGTAGAAAACTCACTGTATAAAAAAGCGAATCGAGTGCTTGTGGTGGATGTCAGCCCAGAAACGCAACTTAAGCGCACCATGCAGCGCGATGATGTAACTCGCGAGCATGTCGAACAAATCCTTGCTGCTCAGGCAACGCGCGAAGCCCGCCTTGCCGTGGCAGATGACGTCATTGATAATAACGGCGCACCGGATGCTATCGCATCGGATGTTGCCCGCCTGCACGCACACTATTTGCAGCTTGCGTCGCAGTTTGTCTCACAGGAAAAACCGTAA", + "dna_sequence_length": 621, + "functions": [ + "dephospho-CoA kinase" + ], + "id": "CDS_100", + "location": [ + [ + "NC_000913", + 113219, + "-", + 621 + ] + ], + "md5": "983f26db7447e6f438106ac3053e37f0", + "parent_gene": "", + "protein_md5": "a298a24b75c6cca43bd5aa7079e218e8", + "protein_translation": "MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000362" + ], + [ + "gene_synonym", + "ECK0104" + ], + [ + "gene_synonym", + "EcoGene:EG10422" + ], + [ + "gene_synonym", + "GI:16128097" + ], + [ + "gene_synonym", + "GeneID:948986" + ], + [ + "gene_synonym", + "JW0101" + ], + [ + "gene_synonym", + "NP_414646.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60560" + ], + [ + "gene_synonym", + "b0104" + ], + [ + "gene_synonym", + "guaC" + ] + ], + "dna_sequence": "ATGCGTATTGAAGAAGATCTGAAGTTAGGTTTTAAAGACGTTCTCATCCGCCCTAAACGCTCCACTCTTAAAAGCCGTTCCGATGTTGAACTGGAACGTCAATTCACCTTCAAACATTCAGGTCAGAGCTGGTCCGGCGTGCCGATTATCGCCGCAAATATGGACACCGTAGGCACATTTTCTATGGCCTCTGCGCTGGCTTCTTTTGATATTTTGACTGCTGTGCATAAACACTATTCTGTCGAAGAGTGGCAAGCGTTTATCAACAATTCTTCCGCTGATGTGCTGAAACATGTGATGGTTTCTACCGGTACGTCTGATGCGGATTTCGAAAAAACTAAACAGATTCTCGACCTGAACCCGGCATTAAACTTCGTTTGTATTGACGTGGCGAATGGTTATTCCGAACACTTCGTGCAGTTCGTTGCGAAAGCGCGTGAAGCGTGGCCGACCAAAACCATTTGTGCTGGTAACGTAGTGACTGGTGAAATGTGTGAGGAGCTTATCCTCTCAGGTGCCGATATCGTTAAAGTTGGCATTGGCCCAGGTTCTGTTTGTACAACTCGCGTCAAAACAGGCGTCGGTTATCCGCAACTTTCTGCGGTAATCGAATGTGCCGATGCTGCGCACGGTCTGGGCGGAATGATCGTCAGCGATGGTGGCTGCACCACGCCGGGCGATGTGGCGAAAGCCTTTGGCGGCGGTGCCGATTTCGTCATGCTTGGCGGCATGCTGGCGGGCCACGAAGAGAGCGGCGGTCGCATCGTTGAGGAGAACGGCGAGAAATTTATGCTGTTCTACGGCATGAGCTCCGAGTCTGCGATGAAACGTCACGTTGGCGGCGTTGCGGAATATCGCGCAGCAGAAGGTAAAACCGTTAAGCTGCCGCTGCGAGGCCCGGTTGAAAATACCGCGCGAGATATTTTGGGCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAA", + "dna_sequence_length": 1044, + "functions": [ + "GMP reductase" + ], + "id": "CDS_101", + "location": [ + [ + "NC_000913", + 113444, + "+", + 1044 + ] + ], + "md5": "6af735df0a40f9211f9dff0e598a310b", + "parent_gene": "", + "protein_md5": "e774b4bd360a8560af7557b6b005cc1c", + "protein_translation": "MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNNL", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000366" + ], + [ + "gene_synonym", + "ECK0105" + ], + [ + "gene_synonym", + "EcoGene:EG11798" + ], + [ + "gene_synonym", + "GI:16128099" + ], + [ + "gene_synonym", + "GeneID:945806" + ], + [ + "gene_synonym", + "JW0102" + ], + [ + "gene_synonym", + "NP_414648.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36646" + ], + [ + "gene_synonym", + "b0106" + ], + [ + "gene_synonym", + "hofC" + ], + [ + "gene_synonym", + "hopC" + ], + [ + "gene_synonym", + "yacD" + ] + ], + "dna_sequence": "ATGGCGAGTAAGCAACTCTGGCGCTGGCATGGCATAACCGGCGACGGCAATGCGCAAGATGGGATGCTATGGGCAGAGAGCCGTACTTTACTGCTTATGGCACTACAGCAACAGATGGTTACCCCACTAAGCCTGAAGCGAATCGCCATCAATTCTGCGCAGTGGCGAGGAGATAAAAGCGCGGAAGTCATTCATCAACTGGCGACGCTACTCAAAGCAGGGTTAACGCTTTCTGAAGGGCTGGCTCTGCTGGCGGAACAGCATCCCAGTAAGCAATGGCAAGCGTTGCTGCAATCGCTGGCGCACGATCTCGAACAGGGCATTGCTTTTTCCAATGCCTTATTACCCTGGTCAGAGGTATTTCCGCCGCTCTATCAGGCGATGATCCGCACGGGTGAACTGACCGGTAAGCTGGATGAATGCTGCTTTGAACTGGCGCGTCAGCAAAAAGCCCAGCGTCAGTTGACCGACAAAGTGAAATCAGCGTTACGTTATCCCATCATCATTTTAGCGATGGCAATCATGGTGGTTGTGGCAATGCTGCATTTTGTTCTGCCGGAGTTTGCCGCTATCTATAAGACCTTCAACACCCCACTACCGGCACTAACGCAGGGGATCATGACGCTGGCAGACTTTAGTGGCGAATGGAGCTGGCTGCTGGTGTTGTTCGGCTTTCTGCTGGCGATAGCCAATAAGTTGCTGATGCGCCGACCGACCTGGCTTATAGTGCGGCAGAAATTGCTGTTACGCATCCCGATTATGGGTTCACTGATGCGGGGACAAAAACTCACGCAGATCTTTACGATTCTGGCGCTGACACAAAGTGCAGGCATTACTTTTTTACAGGGCGTAGAGAGCGTCAGAGAAACAATGCGCTGCCCGTACTGGGTGCAACTTCTGACACAAATCCAGCACGATATCAGTAACGGTCAACCCATCTGGCTGGCGCTAAAAAATACCGGTGAGTTTAGCCCGCTCTGTTTGCAATTAGTGAGAACAGGAGAGGCATCCGGCTCTCTGGATCTCATGTTAGACAACCTCGCCCATCATCATCGGGAAAACACAATGGCGCTGGCGGATAACCTCGCAGCCTTACTGGAACCGGCGTTGCTGATCATAACGGGAGGAATTATTGGTACGCTGGTGGTGGCAATGTATCTGCCAATTTTCCATTTAGGCGATGCGATGAGTGGGATGGGATAA", + "dna_sequence_length": 1203, + "functions": [ + "assembly protein in type IV pilin biogenesis, transmembrane protein" + ], + "id": "CDS_102", + "location": [ + [ + "NC_000913", + 115724, + "-", + 1203 + ] + ], + "md5": "6c85456dd07aabfe0a47fb7d8340d584", + "parent_gene": "", + "protein_md5": "63ecd4b41556f1bad2ce79765d13a1f8", + "protein_translation": "MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLSLKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVKSALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSWLLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLLTQIQHDISNGQPIWLALKNTGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRENTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000370" + ], + [ + "gene_synonym", + "ECK0106" + ], + [ + "gene_synonym", + "EcoGene:EG12106" + ], + [ + "gene_synonym", + "GI:16128100" + ], + [ + "gene_synonym", + "GeneID:947481" + ], + [ + "gene_synonym", + "JW0103" + ], + [ + "gene_synonym", + "NP_414649.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36645" + ], + [ + "gene_synonym", + "b0107" + ], + [ + "gene_synonym", + "hofB" + ], + [ + "gene_synonym", + "hopB" + ] + ], + "dna_sequence": "ATGAATATTCCACAGCTCACTGCCCTGTGTCTGCGTTATCATGGAGTCTTGCTGGATGCCAGCGAAGAGGTGGTTCATGTTGCGGTAGTCGATGCACCTTCGCATGAGCTACTGGACGCATTGCATTTCGCTACCACCAAACGTATTGAGATCACCTGCTGGACGCGCCAACAAATGGAAGGTCACGCCAGTCGCACACAACAGACATTGCCCGTAGCTGTTCAGGAGAAGCATCAGCCCAAAGCAGAGTTGCTAACTCGAACGTTACAATCTGCGCTGGAACAACGCGCGTCTGATATTCATATCGAACCAGCGGACAATGCCTACCGCATCCGCTTGCGTATCGACGGCGTATTGCATCCTTTACCGGATGTTTCACCGGATGCCGGAGTCGCATTAACCGCCAGATTAAAAGTGCTGGGAAACCTGGATATTGCGGAACATCGCCTGCCGCAGGACGGGCAATTCACTGTCGAACTGGCAGGAAACGCCGTCTCATTTCGTATTGCGACCTTACCATGTCGGGGTGGTGAAAAGGTGGTATTAAGGTTGTTACAGCAGGTGGGTCAGGCACTGGATGTCAACACGCTTGGAATGCAGCCGTTACAACTGGCGGACTTTGCTCATGCCTTGCAACAACCACAGGGACTGGTGCTGGTAACTGGCCCTACCGGCAGCGGCAAAACGGTCACGCTTTATAGTGCCCTGCAAAAGCTGAATACCGCTGACATTAATATTTGTAGCGTCGAAGATCCAGTTGAGATCCCCATAGCCGGACTAAACCAGACGCAAATCCATCCGCGTGCCGGACTCACCTTTCAGGGCGTTTTGCGTGCGTTATTGCGCCAGGATCCTGACGTCATCATGATCGGAGAGATCCGCGATGGCGAAACAGCAGAGATCGCTATTAAAGCGGCGCAAACTGGTCACCTGGTGTTGTCTACCCTACACACTAATTCCACCTGCGAAACGCTGGTACGTTTACAGCAAATGGGGGTCGCCCGCTGGATGCTATCATCGGCGCTTACGCTGGTAATAGCCCAGCGTCTGGTACGCAAACTTTGCCCACATTGTCGCCGGCAGCAAGGGGAGCCCATCCACATTCCAGACAATGTATGGCCATCGCCGCTGCCCCACTGGCAGGCACCCGGTTGTGTACATTGCTACCACGGTTTTTATGGTCGTACGGCCTTATTTGAAGTTCTGCCCATAACGCCGGTCATTCGTCAGCTTATTTCCGCTAATACCGACGTTGAATCGCTGGAAACGCACGCACGACAGGCGGGTATGCGTACGCTTTTTGAAAACGGCTGCCTGGCCGTAGAGCAAGGCTTAACCACCTTTGAAGAGTTAATCCGCGTACTGGGGATGCCGCATGGCGAGTAA", + "dna_sequence_length": 1386, + "functions": [ + "T2SE secretion family protein", + "P-loop ATPase superfamily protein" + ], + "id": "CDS_103", + "location": [ + [ + "NC_000913", + 117099, + "-", + 1386 + ] + ], + "md5": "47695ea63fe0012401482f32499cde33", + "parent_gene": "", + "protein_md5": "3137a58a24bdcdf04c81fcf0c2041571", + "protein_translation": "MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000372" + ], + [ + "gene_synonym", + "ECK0107" + ], + [ + "gene_synonym", + "EcoGene:EG12107" + ], + [ + "gene_synonym", + "GI:16128101" + ], + [ + "gene_synonym", + "GeneID:945817" + ], + [ + "gene_synonym", + "JW0104" + ], + [ + "gene_synonym", + "NP_414650.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36647" + ], + [ + "gene_synonym", + "b0108" + ], + [ + "gene_synonym", + "ppdD" + ] + ], + "dna_sequence": "ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTATTCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAGAGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGCTATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCATGACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGCAAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA", + "dna_sequence_length": 441, + "functions": [ + "putative prepilin peptidase-dependent pilin" + ], + "id": "CDS_104", + "location": [ + [ + "NC_000913", + 117549, + "-", + 441 + ] + ], + "md5": "482f095c27bf82d94de9d72748b68bb4", + "parent_gene": "", + "protein_md5": "6ad437c6258227e99ba583609f236310", + "protein_translation": "MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000374" + ], + [ + "gene_synonym", + "ECK0108" + ], + [ + "gene_synonym", + "EcoGene:EG11546" + ], + [ + "gene_synonym", + "GI:16128102" + ], + [ + "gene_synonym", + "GeneID:948869" + ], + [ + "gene_synonym", + "JW0105" + ], + [ + "gene_synonym", + "NP_414651.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30011" + ], + [ + "gene_synonym", + "b0109" + ], + [ + "gene_synonym", + "nadC" + ] + ], + "dna_sequence": "ATGCCGCCTCGCCGCTATAACCCTGACACCCGACGTGACGAGCTGCTGGAACGCATTAATCTCGATATCCCCGGCGCGGTGGCCCAGGCGCTGCGGGAAGATTTAGGCGGAACAGTCGATGCCAACAATGATATTACGGCAAAACTTTTACCGGAAAATTCTCGCTCTCATGCCACGGTGATCACCCGCGAGAATGGCGTCTTTTGCGGCAAACGCTGGGTTGAAGAGGTGTTTATTCAACTGGCAGGCGACGATGTCACCATAATCTGGCATGTGGATGACGGCGATGTCATCAATGCCAATCAATCCTTGTTCGAACTTGAAGGCCCATCCCGCGTGCTGTTAACGGGCGAACGCACTGCGCTTAATTTTGTGCAAACCCTTTCAGGAGTTGCCAGTAAGGTACGCCACTATGTCGAATTGCTGGAAGGCACCAACACGCAGTTGTTGGATACGCGCAAAACCTTACCCGGCCTGCGTTCAGCTCTGAAATACGCGGTACTTTGCGGCGGCGGAGCGAATCACCGTCTGGGGCTTTCTGATGCCTTCCTGATCAAAGAAAACCATATTATTGCCTCCGGCTCAGTGCGCCAGGCGGTCGAAAAAGCGTCCTGGCTGCACCCGGATGCGCCAGTAGAAGTCGAAGTAGAGAATCTGGAAGAACTTGATGAAGCCCTGAAAGCAGGAGCCGATATCATCATGCTGGATAACTTCGAAACAGAACAGATGCGCGAAGCCGTCAAACGCACCAACGGCAAGGCGCTACTGGAAGTGTCTGGCAACGTCACTGACAAAACACTGCGTGAATTTGCCGAAACGGGCGTGGACTTTATCTCCGTCGGTGCGCTAACTAAACACGTACAAGCACTCGACCTTTCAATGCGTTTTCGCTAA", + "dna_sequence_length": 894, + "functions": [ + "quinolinate phosphoribosyltransferase" + ], + "id": "CDS_105", + "location": [ + [ + "NC_000913", + 118645, + "-", + 894 + ] + ], + "md5": "83bc09b727d2525b97a1d21e76072356", + "parent_gene": "", + "protein_md5": "3f6a3d6ff2239a91fb28445f5e4c327c", + "protein_translation": "MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000380" + ], + [ + "gene_synonym", + "ECK0109" + ], + [ + "gene_synonym", + "EcoGene:EG10041" + ], + [ + "gene_synonym", + "GI:16128103" + ], + [ + "gene_synonym", + "GeneID:948877" + ], + [ + "gene_synonym", + "JW0106" + ], + [ + "gene_synonym", + "NP_414652.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13016" + ], + [ + "gene_synonym", + "ampD" + ], + [ + "gene_synonym", + "b0110" + ] + ], + "dna_sequence": "ATGTTGTTAGAACAGGGGTGGCTGGTTGGCGCGCGCCGCGTTCCCTCACCACATTACGATTGCCGCCCGGATGACGAAACACCCACCCTGCTGGTGGTGCACAATATTAGCCTGCCGCCAGGCGAGTTTGGCGGTCCGTGGATCGACGCATTATTCACTGGAACTATTGATCCGCAGGCACATCCTTTCTTTGCTGAGATCGCCCATTTGCGCGTCTCCGCTCACTGTTTGATTCGCCGTGATGGTGAAATAGTCCAGTATGTTCCTTTCGATAAACGTGCATGGCATGCGGGAGTCTCTCAGTATCAGGGGCGCGAACGCTGCAATGATTTTTCTATTGGGATTGAGCTTGAAGGCACCGATACGCTGGCGTATACCGATGCGCAGTATCAACAGCTTGCGGCGGTTACGCGGGCACTGATTGATTGCTATCCGGATATCGCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGA", + "dna_sequence_length": 552, + "functions": [ + "1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent", + "murein amidase" + ], + "id": "CDS_106", + "location": [ + [ + "NC_000913", + 118733, + "+", + 552 + ] + ], + "md5": "2aa634fbc8a5b6046e1aba5e691c63d5", + "parent_gene": "", + "protein_md5": "3b4a18f012c60d06e90e4851e219312c", + "protein_translation": "MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000382" + ], + [ + "gene_synonym", + "ECK0110" + ], + [ + "gene_synonym", + "EcoGene:EG10042" + ], + [ + "gene_synonym", + "GI:16128104" + ], + [ + "gene_synonym", + "GeneID:946678" + ], + [ + "gene_synonym", + "JW0107" + ], + [ + "gene_synonym", + "NP_414653.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE14" + ], + [ + "gene_synonym", + "ampE" + ], + [ + "gene_synonym", + "b0111" + ] + ], + "dna_sequence": "ATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGGTGAAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGCTACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCGGCAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGCTGATTGTGGGGGGAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGCATCATCGTTTACAGTCCGGCATTGATGCCGTGCTTCATGTACTGGATTGGGTGCCGGTTCGTCTTGCGGGTGTGGTATATGCCTTGATCGGTCATGGTGAGAAAGCGTTACCGGCCTGGTTTGCTTCGCTGGGTGATTTCCATACTTCGCAGTATCAGGTGTTAACGCGTCTGGCGCAGTTCTCTCTGGCGCGTGAACCGCATGTCGATAAGGTGGAGACGCCGAAGGCAGCGGTTTCAATGGCGAAGAAAACCTCGTTCGTGGTCGTGGTGGTGATTGCACTACTGACGATTTACGGGGCGTTGGTGTAA", + "dna_sequence_length": 855, + "functions": [ + "ampicillin resistance inner membrane protein", + "putative signaling protein in beta-lactamase regulation" + ], + "id": "CDS_107", + "location": [ + [ + "NC_000913", + 119281, + "+", + 855 + ] + ], + "md5": "6ca9d5085e97b2904925e7011510a035", + "parent_gene": "", + "protein_md5": "b8adf77916259d7103ab136bcf59a655", + "protein_translation": "MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000384" + ], + [ + "gene_synonym", + "ECK0111" + ], + [ + "gene_synonym", + "EcoGene:EG10084" + ], + [ + "gene_synonym", + "GI:16128105" + ], + [ + "gene_synonym", + "GeneID:946018" + ], + [ + "gene_synonym", + "JW0108" + ], + [ + "gene_synonym", + "NP_414654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15993" + ], + [ + "gene_synonym", + "aroP" + ], + [ + "gene_synonym", + "b0112" + ] + ], + "dna_sequence": "ATGATGGAAGGTCAACAGCACGGCGAGCAGCTAAAGCGCGGCCTTAAAAACCGCCATATTCAGCTTATCGCGCTGGGTGGCGCGATAGGGACCGGGTTATTCCTGGGTAGCGCCTCCGTAATACAGTCCGCAGGGCCAGGGATTATCCTGGGTTACGCCATTGCTGGTTTTATCGCCTTTCTGATCATGCGTCAGCTGGGTGAAATGGTGGTCGAAGAACCTGTCGCAGGCTCCTTTAGCCACTTTGCTTATAAATACTGGGGCAGTTTTGCCGGTTTCGCCTCTGGCTGGAACTACTGGGTACTGTACGTTTTAGTTGCCATGGCTGAGCTGACTGCCGTGGGTAAATACATTCAGTTCTGGTATCCGGAAATCCCCACCTGGGTTTCTGCCGCCGTATTCTTTGTGGTGATTAACGCCATCAACCTGACCAACGTTAAAGTGTTTGGCGAGATGGAGTTCTGGTTTGCCATTATCAAAGTTATCGCGGTGGTAGCGATGATCATCTTCGGCGGCTGGCTGCTATTCAGTGGCAACGGCGGCCCGCAGGCGACCGTTAGCAACCTGTGGGATCAGGGTGGTTTCCTGCCGCACGGCTTCACCGGGCTGGTGATGATGATGGCGATTATCATGTTCTCGTTCGGTGGTCTGGAACTGGTGGGGATCACCGCAGCAGAAGCTGATAACCCGGAGCAAAGTATACCGAAAGCAACTAACCAGGTTATCTACCGCATCCTGATTTTCTATATTGGTTCGTTAGCCGTTCTGCTCTCACTGATGCCGTGGACCCGCGTTACCGCCGATACCAGTCCGTTTGTGCTGATCTTCCACGAGTTAGGCGATACCTTTGTGGCGAATGCGCTGAACATCGTGGTACTGACTGCGGCGCTCTCCGTGTACAACAGCTGCGTATATTGCAACAGCCGTATGCTGTTTGGTCTGGCACAACAGGGTAATGCGCCAAAAGCGCTGGCGTCTGTCGATAAACGTGGTGTACCAGTAAATACCATTCTGGTGTCTGCACTGGTAACGGCGTTGTGCGTACTGATTAACTACCTTGCCCCAGAGTCCGCTTTCGGACTGTTAATGGCGCTGGTGGTATCTGCACTGGTAATCAACTGGGCGATGATTAGCCTGGCGCATATGAAATTCCGTCGCGCCAAGCAGGAACAAGGCGTGGTAACTCGCTTCCCTGCTCTGCTTTATCCGCTGGGTAACTGGATCTGCCTGCTGTTTATGGCGGCGGTACTGGTGATTATGCTGATGACCCCAGGAATGGCGATTTCGGTATACCTGATCCCGGTATGGCTGATCGTGTTAGGTATCGGCTATCTGTTTAAAGAGAAAACCGCCAAAGCCGTAAAAGCGCATTAA", + "dna_sequence_length": 1374, + "functions": [ + "aromatic amino acid transporter" + ], + "id": "CDS_108", + "location": [ + [ + "NC_000913", + 121551, + "-", + 1374 + ] + ], + "md5": "ae7182eab8f54303d1fb58001c25c509", + "parent_gene": "", + "protein_md5": "ee01be8c1c7402256b5d426934c9b15c", + "protein_translation": "MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000394" + ], + [ + "gene_synonym", + "ECK0112" + ], + [ + "gene_synonym", + "EcoGene:EG11088" + ], + [ + "gene_synonym", + "GI:16128106" + ], + [ + "gene_synonym", + "GeneID:944827" + ], + [ + "gene_synonym", + "JW0109" + ], + [ + "gene_synonym", + "NP_414655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACL9" + ], + [ + "gene_synonym", + "aceC" + ], + [ + "gene_synonym", + "b0113" + ], + [ + "gene_synonym", + "genA" + ], + [ + "gene_synonym", + "pdhR" + ], + [ + "gene_synonym", + "yacB" + ] + ], + "dna_sequence": "ATGGCCTACAGCAAAATCCGCCAACCAAAACTCTCCGATGTGATTGAGCAGCAACTGGAGTTTTTGATCCTCGAAGGCACTCTCCGCCCGGGCGAAAAACTCCCACCGGAACGCGAACTGGCAAAACAGTTTGACGTCTCCCGTCCCTCCTTGCGTGAGGCGATTCAACGTCTCGAAGCGAAGGGCTTGTTGCTTCGTCGCCAGGGTGGCGGCACTTTTGTCCAGAGCAGCCTATGGCAAAGCTTCAGCGATCCGCTGGTGGAGCTGCTCTCCGACCATCCTGAGTCACAGTATGACTTGCTCGAAACACGACACGCCCTGGAAGGTATCGCCGCTTATTACGCCGCGCTGCGTAGTACCGATGAAGACAAGGAACGCATCCGTGAACTCCACCACGCCATAGAGCTGGCGCAGCAGTCTGGCGATCTGGACGCGGAATCAAACGCCGTACTCCAGTATCAGATTGCCGTCACCGAAGCGGCCCACAATGTGGTTCTGCTTCATCTGCTAAGGTGTATGGAGCCGATGTTGGCCCAGAATGTCCGCCAGAACTTCGAATTGCTCTATTCGCGTCGCGAGATGCTGCCGCTGGTGAGTAGTCACCGCACCCGCATATTTGAAGCGATTATGGCCGGTAAGCCGGAAGAAGCGCGCGAAGCATCGCATCGCCATCTGGCCTTTATCGAAGAAATTTTGCTCGACAGAAGTCGTGAAGAGAGCCGCCGTGAGCGTTCTCTGCGTCGTCTGGAGCAACGAAAGAATTAG", + "dna_sequence_length": 765, + "functions": [ + "pyruvate dehydrogenase complex repressor", + "autorepressor" + ], + "id": "CDS_109", + "location": [ + [ + "NC_000913", + 122092, + "+", + 765 + ] + ], + "md5": "42adbab6ee98448eb597dd7b5639ec05", + "parent_gene": "", + "protein_md5": "46a9878e5f5f0a1f25c26a908baa14ab", + "protein_translation": "MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000397" + ], + [ + "gene_synonym", + "ECK0113" + ], + [ + "gene_synonym", + "EcoGene:EG10024" + ], + [ + "gene_synonym", + "GI:16128107" + ], + [ + "gene_synonym", + "GeneID:944834" + ], + [ + "gene_synonym", + "JW0110" + ], + [ + "gene_synonym", + "NP_414656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG8" + ], + [ + "gene_synonym", + "aceE" + ], + [ + "gene_synonym", + "b0114" + ] + ], + "dna_sequence": "ATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAGCTATCCGCTGGAACGCCATCATGACGGTGCTGCGTGCGTCGAAAAAAGACCTCGAACTGGGCGGCCATATGGCGTCCTTCCAGTCTTCCGCAACCATTTATGATGTGTGCTTTAACCACTTCTTCCGTGCACGCAACGAGCAGGATGGCGGCGACCTGGTTTACTTCCAGGGCCACATCTCCCCGGGCGTGTACGCTCGTGCTTTCCTGGAAGGTCGTCTGACTCAGGAGCAGCTGGATAACTTCCGTCAGGAAGTTCACGGCAATGGCCTCTCTTCCTATCCGCACCCGAAACTGATGCCGGAATTCTGGCAGTTCCCGACCGTATCTATGGGTCTGGGTCCGATTGGTGCTATTTACCAGGCTAAATTCCTGAAATATCTGGAACACCGTGGCCTGAAAGATACCTCTAAACAAACCGTTTACGCGTTCCTCGGTGACGGTGAAATGGACGAACCGGAATCCAAAGGTGCGATCACCATCGCTACCCGTGAAAAACTGGATAACCTGGTCTTCGTTATCAACTGTAACCTGCAGCGTCTTGACGGCCCGGTCACCGGTAACGGCAAGATCATCAACGAACTGGAAGGCATCTTCGAAGGTGCTGGCTGGAACGTGATCAAAGTGATGTGGGGTAGCCGTTGGGATGAACTGCTGCGTAAGGATACCAGCGGTAAACTGATCCAGCTGATGAACGAAACCGTTGACGGCGACTACCAGACCTTCAAATCGAAAGATGGTGCGTACGTTCGTGAACACTTCTTCGGTAAATATCCTGAAACCGCAGCACTGGTTGCAGACTGGACTGACGAGCAGATCTGGGCACTGAACCGTGGTGGTCACGATCCGAAGAAAATCTACGCTGCATTCAAGAAAGCGCAGGAAACCAAAGGCAAAGCGACAGTAATCCTTGCTCATACCATTAAAGGTTACGGCATGGGCGACGCGGCTGAAGGTAAAAACATCGCGCACCAGGTTAAGAAAATGAACATGGACGGTGTGCGTCATATCCGCGACCGTTTCAATGTGCCGGTGTCTGATGCAGATATCGAAAAACTGCCGTACATCACCTTCCCGGAAGGTTCTGAAGAGCATACCTATCTGCACGCTCAGCGTCAGAAACTGCACGGTTATCTGCCAAGCCGTCAGCCGAACTTCACCGAGAAGCTTGAGCTGCCGAGCCTGCAAGACTTCGGCGCGCTGTTGGAAGAGCAGAGCAAAGAGATCTCTACCACTATCGCTTTCGTTCGTGCTCTGAACGTGATGCTGAAGAACAAGTCGATCAAAGATCGTCTGGTACCGATCATCGCCGACGAAGCGCGTACTTTCGGTATGGAAGGTCTGTTCCGTCAGATTGGTATTTACAGCCCGAACGGTCAGCAGTACACCCCGCAGGACCGCGAGCAGGTTGCTTACTATAAAGAAGACGAGAAAGGTCAGATTCTGCAGGAAGGGATCAACGAGCTGGGCGCAGGTTGTTCCTGGCTGGCAGCGGCGACCTCTTACAGCACCAACAATCTGCCGATGATCCCGTTCTACATCTATTACTCGATGTTCGGCTTCCAGCGTATTGGCGATCTGTGCTGGGCGGCTGGCGACCAGCAAGCGCGTGGCTTCCTGATCGGCGGTACTTCCGGTCGTACCACCCTGAACGGCGAAGGTCTGCAGCACGAAGATGGTCACAGCCACATTCAGTCGCTGACTATCCCGAACTGTATCTCTTACGACCCGGCTTACGCTTACGAAGTTGCTGTCATCATGCATGACGGTCTGGAGCGTATGTACGGTGAAAAACAAGAGAACGTTTACTACTACATCACTACGCTGAACGAAAACTACCACATGCCGGCAATGCCGGAAGGTGCTGAGGAAGGTATCCGTAAAGGTATCTACAAACTCGAAACTATTGAAGGTAGCAAAGGTAAAGTTCAGCTGCTCGGCTCCGGTTCTATCCTGCGTCACGTCCGTGAAGCAGCTGAGATCCTGGCGAAAGATTACGGCGTAGGTTCTGACGTTTATAGCGTGACCTCCTTCACCGAGCTGGCGCGTGATGGTCAGGATTGTGAACGCTGGAACATGCTGCACCCGCTGGAAACTCCGCGCGTTCCGTATATCGCTCAGGTGATGAACGACGCTCCGGCAGTGGCATCTACCGACTATATGAAACTGTTCGCTGAGCAGGTCCGTACTTACGTACCGGCTGACGACTACCGCGTACTGGGTACTGATGGCTTCGGTCGTTCCGACAGCCGTGAGAACCTGCGTCACCACTTCGAAGTTGATGCTTCTTATGTCGTGGTTGCGGCGCTGGGCGAACTGGCTAAACGTGGCGAAATCGATAAGAAAGTGGTTGCTGACGCAATCGCCAAATTCAACATCGATGCAGATAAAGTTAACCCGCGTCTGGCGTAA", + "dna_sequence_length": 2664, + "functions": [ + "pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding" + ], + "id": "CDS_110", + "location": [ + [ + "NC_000913", + 123017, + "+", + 2664 + ] + ], + "md5": "f81fc7d70ff91a73966ab714f720cdec", + "parent_gene": "", + "protein_md5": "6661e42b76599483a127a1fe3c7d0752", + "protein_translation": "MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA", + "protein_translation_length": 887, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000400" + ], + [ + "gene_synonym", + "ECK0114" + ], + [ + "gene_synonym", + "EcoGene:EG10025" + ], + [ + "gene_synonym", + "GI:16128108" + ], + [ + "gene_synonym", + "GeneID:944794" + ], + [ + "gene_synonym", + "JW0111" + ], + [ + "gene_synonym", + "NP_414657.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06959" + ], + [ + "gene_synonym", + "aceF" + ], + [ + "gene_synonym", + "b0115" + ] + ], + "dna_sequence": "ATGGCTATCGAAATCAAAGTACCGGACATCGGGGCTGATGAAGTTGAAATCACCGAGATCCTGGTCAAAGTGGGCGACAAAGTTGAAGCCGAACAGTCGCTGATCACCGTAGAAGGCGACAAAGCCTCTATGGAAGTTCCGTCTCCGCAGGCGGGTATCGTTAAAGAGATCAAAGTCTCTGTTGGCGATAAAACCCAGACCGGCGCACTGATTATGATTTTCGATTCCGCCGACGGTGCAGCAGACGCTGCACCTGCTCAGGCAGAAGAGAAGAAAGAAGCAGCTCCGGCAGCAGCACCAGCGGCTGCGGCGGCAAAAGACGTTAACGTTCCGGATATCGGCAGCGACGAAGTTGAAGTGACCGAAATCCTGGTGAAAGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCACCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGACTGAAGTGATGGTGAAAGTGGGCGACAAAGTTGCCGCTGAACAGTCACTGATCACCGTAGAAGGCGACAAAGCTTCTATGGAAGTTCCGGCGCCGTTTGCAGGCGTCGTGAAGGAACTGAAAGTCAACGTTGGCGATAAAGTGAAAACTGGCTCGCTGATTATGATCTTCGAAGTTGAAGGCGCAGCGCCTGCGGCAGCTCCTGCGAAACAGGAAGCGGCAGCGCCGGCACCGGCAGCAAAAGCTGAAGCCCCGGCAGCAGCACCAGCTGCGAAAGCGGAAGGCAAATCTGAATTTGCTGAAAACGACGCTTATGTTCACGCGACTCCGCTGATCCGCCGTCTGGCACGCGAGTTTGGTGTTAACCTTGCGAAAGTGAAGGGCACTGGCCGTAAAGGTCGTATCCTGCGCGAAGACGTTCAGGCTTACGTGAAAGAAGCTATCAAACGTGCAGAAGCAGCTCCGGCAGCGACTGGCGGTGGTATCCCTGGCATGCTGCCGTGGCCGAAGGTGGACTTCAGCAAGTTTGGTGAAATCGAAGAAGTGGAACTGGGCCGCATCCAGAAAATCTCTGGTGCGAACCTGAGCCGTAACTGGGTAATGATCCCGCATGTTACTCACTTCGACAAAACCGATATCACCGAGTTGGAAGCGTTCCGTAAACAGCAGAACGAAGAAGCGGCGAAACGTAAGCTGGATGTGAAGATCACCCCGGTTGTCTTCATCATGAAAGCCGTTGCTGCAGCTCTTGAGCAGATGCCTCGCTTCAATAGTTCGCTGTCGGAAGACGGTCAGCGTCTGACCCTGAAGAAATACATCAACATCGGTGTGGCGGTGGATACCCCGAACGGTCTGGTTGTTCCGGTATTCAAAGACGTCAACAAGAAAGGCATCATCGAGCTGTCTCGCGAGCTGATGACTATTTCTAAGAAAGCGCGTGACGGTAAGCTGACTGCGGGCGAAATGCAGGGCGGTTGCTTCACCATCTCCAGCATCGGCGGCCTGGGTACTACCCACTTCGCGCCGATTGTGAACGCGCCGGAAGTGGCTATCCTCGGCGTTTCCAAGTCCGCGATGGAGCCGGTGTGGAATGGTAAAGAGTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAA", + "dna_sequence_length": 1893, + "functions": [ + "pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2" + ], + "id": "CDS_111", + "location": [ + [ + "NC_000913", + 125695, + "+", + 1893 + ] + ], + "md5": "4e77faef4403e2421f715fcc925c2fb9", + "parent_gene": "", + "protein_md5": "71a490c733e5f9df7d3b5b5c0a876a35", + "protein_translation": "MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSDIRRLVM", + "protein_translation_length": 630, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000404" + ], + [ + "gene_synonym", + "ECK0115" + ], + [ + "gene_synonym", + "EcoGene:EG10543" + ], + [ + "gene_synonym", + "GI:16128109" + ], + [ + "gene_synonym", + "GeneID:944854" + ], + [ + "gene_synonym", + "JW0112" + ], + [ + "gene_synonym", + "NP_414658.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9P0" + ], + [ + "gene_synonym", + "b0116" + ], + [ + "gene_synonym", + "dhl" + ], + [ + "gene_synonym", + "lpd" + ], + [ + "gene_synonym", + "lpdA" + ] + ], + "dna_sequence": "ATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCTTCCGTTGCGCTGATTTAGGTCTGGAAACCGTAATCGTAGAACGTTACAACACCCTTGGCGGTGTTTGCCTGAACGTCGGCTGTATCCCTTCTAAAGCACTGCTGCACGTAGCAAAAGTTATCGAAGAAGCCAAAGCGCTGGCTGAACACGGTATCGTCTTCGGCGAACCGAAAACCGATATCGACAAGATTCGTACCTGGAAAGAGAAAGTGATCAATCAGCTGACCGGTGGTCTGGCTGGTATGGCGAAAGGCCGCAAAGTCAAAGTGGTCAACGGTCTGGGTAAATTCACCGGGGCTAACACCCTGGAAGTTGAAGGTGAGAACGGCAAAACCGTGATCAACTTCGACAACGCGATCATTGCAGCGGGTTCTCGCCCGATCCAACTGCCGTTTATTCCGCATGAAGATCCGCGTATCTGGGACTCCACTGACGCGCTGGAACTGAAAGAAGTACCAGAACGCCTGCTGGTAATGGGTGGCGGTATCATCGGTCTGGAAATGGGCACCGTTTACCACGCGCTGGGTTCACAGATTGACGTGGTTGAAATGTTCGACCAGGTTATCCCGGCAGCTGACAAAGACATCGTTAAAGTCTTCACCAAGCGTATCAGCAAGAAATTCAACCTGATGCTGGAAACCAAAGTTACCGCCGTTGAAGCGAAAGAAGACGGCATTTATGTGACGATGGAAGGCAAAAAAGCACCCGCTGAACCGCAGCGTTACGACGCCGTGCTGGTAGCGATTGGTCGTGTGCCGAACGGTAAAAACCTCGACGCAGGCAAAGCAGGCGTGGAAGTTGACGACCGTGGTTTCATCCGCGTTGACAAACAGCTGCGTACCAACGTACCGCACATCTTTGCTATCGGCGATATCGTCGGTCAACCGATGCTGGCACACAAAGGTGTTCACGAAGGTCACGTTGCCGCTGAAGTTATCGCCGGTAAGAAACACTACTTCGATCCGAAAGTTATCCCGTCCATCGCCTATACCGAACCAGAAGTTGCATGGGTGGGTCTGACTGAGAAAGAAGCGAAAGAGAAAGGCATCAGCTATGAAACCGCCACCTTCCCGTGGGCTGCTTCTGGTCGTGCTATCGCTTCCGACTGCGCAGACGGTATGACCAAGCTGATTTTCGACAAAGAATCTCACCGTGTGATCGGTGGTGCGATTGTCGGTACTAACGGCGGCGAGCTGCTGGGTGAAATCGGCCTGGCAATCGAAATGGGTTGTGATGCTGAAGACATCGCACTGACCATCCACGCGCACCCGACTCTGCACGAGTCTGTGGGCCTGGCGGCAGAAGTGTTCGAAGGTAGCATTACCGACCTGCCGAACCCGAAAGCGAAGAAGAAGTAA", + "dna_sequence_length": 1425, + "functions": [ + "dihydrolipoyl dehydrogenase", + "E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes", + "glycine cleavage system L protein", + "dihydrolipoamide dehydrogenase" + ], + "id": "CDS_112", + "location": [ + [ + "NC_000913", + 127912, + "+", + 1425 + ] + ], + "md5": "6d14d57ad1258e42e8290a992d0d6010", + "parent_gene": "", + "protein_md5": "631f444eb319baaf657cb7836d934fa5", + "protein_translation": "MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000406" + ], + [ + "gene_synonym", + "ECK0116" + ], + [ + "gene_synonym", + "EcoGene:EG12315" + ], + [ + "gene_synonym", + "GI:16128110" + ], + [ + "gene_synonym", + "GeneID:944868" + ], + [ + "gene_synonym", + "JW0113" + ], + [ + "gene_synonym", + "NP_414659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36682" + ], + [ + "gene_synonym", + "b0117" + ], + [ + "gene_synonym", + "yacH" + ] + ], + "dna_sequence": "ATGAAAATGACTTTGCCGTTTAAACCCCATGTGCTGGCGCTAATTTGCAGTGCCGGGCTTTGTGCCGCCTCTACCGGGCTATATATAAAAAGCCGCACAGTGGAAGCGCCTGTGGAACCGCAATCGACACAACTGGCTGTGTCTGACGCTGCCGCGGTTACGTTTCCTGCAACGGTTTCCGCACCTCCCGTAACACCCGCCGTCGTCAAATCCGCATTCAGCACTGCACAAATAGATCAATGGGTCGCGCCCGTCGCGCTGTATCCCGACGCCCTACTTTCGCAGGTGCTGATGGCATCAACCTATCCGACAAACGTTGCTCAAGCAGTGCAATGGTCGCACGATAATCCACTTAAACAAGGCGATGCTGCTATTCAGGCGGTATCTGACCAGCCGTGGGACGCCAGCGTTAAATCACTGGTGGCCTTTCCACAATTGATGGCATTGATGGGCGAAAACCCGCAATGGGTGCAAAACCTGGGCGATGCTTTTCTGGCCCAGCCGCAGGACGTGATGGACTCGGTACAGCGATTGCGGCAACTGGCGCAACAAACCGGCTCGCTGAAGTCATCAACCGAACAGAAAGTTATTACCACAACGAAGAAAGCTGTACCGGTAAAACAGACAGTCACGGCACCCGTCATACCATCCAATACAGTTTTAACTGCCAACCCCGTCATTACAGAGCCGGCAACAACCGTCATTTCCATTGAGCCCGCCAATCCTGATGTGGTCTATATTCCCAACTACAACCCAACCGTGGTTTACGGGAACTGGGCCAATACTGCGTATCCGCCGGTTTATCTGCCACCACCAGCCGGAGAACCGTTTGTTGACAGCTTTGTACGCGGATTCGGCTATAGCATGGGCGTTGCTACCACGTACGCACTATTCAGCAGCATCGACTGGGACGACGACGATCATGACCATCATCATCATGACAATGATGATTATCATCACCACGATGGCGGTCATCGTGACGGTAATGGCTGGCAACACAACGGCGACAACATCAATATCGACGTCAACAATTTCAACCGTATCACCGGTGAGCATCTTACTGATAAGAATATGGCATGGCGGCACAATCCAAACTACCGTAATGGTGTGCCCTATCATGATCAGGATATGGCAAAGCGGTTTCATCAAACCGATGTCAACGGCGGAATGAGCGCCACGCAATTACCTGCCCCAACGCGCGACAGCCAGCGTCAGGCGGCAGCAAATCAGTTTCAGCAACGAACACACGCCGCACCAGTCATTACACGAGATACCCAACGTCAGGCAGCGGCACAGCGGTTTAATGAAGCTGAACACTATGGGAGCTATGACGACTTCCACGACTTCAGCCGTCGCCAACCACTGACCCAGCAACAAAAGGACGCCGCTCGTCAGCGTTATCAGTCCGCCTCGCCTGAGCAGCGCCAGGCAGTTCGCGAGAGAATGCAGACTAACCCGAAGATCCAGCAGCGAAGAGAGGCAGCGCGTGAGCGCATTCAGTCCGCCTCGCCTGAGCAGCGCCAGGCGGTTCGCGAGAAAATGCAGACTAACCCGCAGAACCAGCAGCGAAGAGACGCAGCGCGTGAGCGTATTCAGTCCGCATCACCAGAGCAGCGCCAGGTGTTTAAGGAAAAAGTACAGCAGCGCCCACTGAATCAACAGCAACGTGATAACGCCCGCCAGCGTGTTCAATCGGCATCACCTGAACAACGTCAGGTTTTTCGGGAGAAAGTTCAGGAGAGCCGCCCACAACGTCTAAACGACAGTAACCATACTGTCAGGCTGAATAACGAGCAACGGTCAGCAGTATGCGAACGTCTCTCTGAACGTGGAGCAAGAAGACTGGAAAGGTAA", + "dna_sequence_length": 1854, + "functions": [ + "DUF3300 family protein" + ], + "id": "CDS_113", + "location": [ + [ + "NC_000913", + 131260, + "-", + 1854 + ] + ], + "md5": "f0e829b09ad080b306001be2c92fa345", + "parent_gene": "", + "protein_md5": "086ed0d9565aabc8b397e8711026d30c", + "protein_translation": "MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQLAVSDAAAVTFPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTYPTNVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTTKKAVPVKQTVTAPVIPSNTVLTANPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDNDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAANQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFHDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPKIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVCERLSERGARRLER", + "protein_translation_length": 617, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000411" + ], + [ + "gene_synonym", + "ECK0117" + ], + [ + "gene_synonym", + "EcoGene:EG12316" + ], + [ + "gene_synonym", + "GI:16128111" + ], + [ + "gene_synonym", + "GeneID:944864" + ], + [ + "gene_synonym", + "JW0114" + ], + [ + "gene_synonym", + "NP_414660.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36683" + ], + [ + "gene_synonym", + "acnB" + ], + [ + "gene_synonym", + "b0118" + ], + [ + "gene_synonym", + "yacI" + ], + [ + "gene_synonym", + "yacJ" + ] + ], + "dna_sequence": "GTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAGGTTATGCAGTCCTGGGCGGATGCCGAATGGTTCCTGAATCGCCCGGCGCTGGCTGAAAAACTGACCGTTACTGTCTTCAAAGTCACTGGCGAAACTAACACCGATGACCTTTCTCCGGCACCGGATGCGTGGTCACGCCCGGATATCCCACTGCACGCGCTGGCGATGCTGAAAAACGCCCGTGAAGGTATTGAGCCAGACCAGCCTGGTGTTGTTGGTCCGATCAAGCAAATCGAAGCTCTGCAACAGAAAGGTTTCCCGCTGGCGTACGTCGGTGACGTTGTGGGTACGGGTTCTTCGCGTAAATCCGCCACTAACTCCGTTCTGTGGTTTATGGGCGATGATATTCCACATGTGCCGAACAAACGCGGCGGTGGTTTGTGCCTCGGCGGTAAAATTGCACCCATCTTCTTTAACACGATGGAAGACGCGGGTGCACTGCCAATCGAAGTCGACGTCTCTAACCTGAACATGGGCGACGTGATTGACGTTTACCCGTACAAAGGTGAAGTGCGTAACCACGAAACCGGCGAACTGCTGGCGACCTTCGAACTGAAAACCGACGTGCTGATTGATGAAGTGCGTGCTGGTGGCCGTATTCCGCTGATTATCGGGCGTGGCCTGACCACCAAAGCGCGTGAAGCACTTGGTCTGCCGCACAGTGATGTGTTCCGTCAGGCGAAAGATGTCGCTGAGAGCGATCGCGGCTTCTCGCTGGCGCAAAAAATGGTAGGCCGTGCCTGTGGCGTGAAAGGCATTCGTCCGGGCGCGTACTGTGAACCGAAAATGACTTCTGTAGGTTCCCAGGACACCACCGGCCCGATGACCCGTGATGAACTGAAAGACCTGGCGTGCCTGGGCTTCTCGGCTGACCTGGTGATGCAGTCTTTCTGCCACACCGCGGCGTATCCGAAGCCAGTTGACGTGAACACGCACCACACGCTGCCGGACTTCATTATGAACCGTGGCGGTGTGTCGCTGCGTCCGGGTGACGGCGTCATTCACTCCTGGCTGAACCGTATGCTGCTGCCGGATACCGTCGGTACCGGTGGTGACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGTAATGCCGCTTGATATGCCGGAATCCGTTCTGGTGCGCTTCAAAGGCAAAATGCAGCCGGGCATCACCCTGCGCGATCTGGTACACGCTATTCCGCTGTATGCGATCAAACAAGGTCTGCTGACCGTTGAGAAGAAAGGCAAGAAAAACATCTTCTCTGGCCGCATCCTGGAAATTGAAGGTCTGCCGGATCTGAAAGTTGAGCAGGCCTTTGAGCTAACCGATGCGTCCGCCGAGCGTTCTGCCGCTGGTTGTACCATCAAGCTGAACAAAGAACCGATCATCGAATACCTGAACTCTAACATCGTCCTGCTGAAGTGGATGATCGCGGAAGGTTACGGCGATCGTCGTACCCTGGAACGTCGTATTCAGGGCATGGAAAAATGGCTGGCGAATCCTGAGCTGCTGGAAGCCGATGCAGATGCGGAATACGCGGCAGTGATCGACATCGATCTGGCGGATATTAAAGAGCCAATCCTGTGTGCTCCGAACGACCCGGATGACGCGCGTCCGCTGTCTGCGGTACAGGGTGAGAAGATCGACGAAGTGTTTATCGGTTCCTGCATGACCAACATCGGTCACTTCCGTGCTGCGGGTAAACTGCTGGATGCGCATAAAGGTCAGTTGCCGACCCGCCTGTGGGTGGCACCGCCAACCCGTATGGACGCCGCACAGTTGACCGAAGAAGGCTACTACAGCGTCTTCGGTAAGAGTGGTGCGCGTATCGAGATCCCTGGCTGTTCCCTGTGTATGGGTAACCAGGCGCGTGTGGCGGACGGTGCAACGGTGGTTTCCACCTCTACCCGTAACTTCCCGAACCGTCTGGGTACTGGCGCGAATGTCTTCCTGGCTTCTGCGGAACTGGCGGCTGTTGCGGCGCTGATTGGCAAACTGCCGACGCCGGAAGAGTACCAGACCTACGTGGCGCAGGTAGATAAAACAGCCGTTGATACTTACCGTTATCTGAACTTCAACCAGCTTTCTCAGTACACCGAGAAAGCCGATGGGGTGATTTTCCAGACTGCGGTTTAA", + "dna_sequence_length": 2598, + "functions": [ + "aconitate hydratase 2", + "aconitase B", + "2-methyl-cis-aconitate hydratase" + ], + "id": "CDS_114", + "location": [ + [ + "NC_000913", + 131615, + "+", + 2598 + ] + ], + "md5": "b5f2fba8bb4980fedcf5a1bc39b368a4", + "parent_gene": "", + "protein_md5": "7a3874660a6c17014cd75b3a253359e3", + "protein_translation": "MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKADGVIFQTAV", + "protein_translation_length": 865, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000414" + ], + [ + "gene_synonym", + "ECK0118" + ], + [ + "gene_synonym", + "EcoGene:EG12605" + ], + [ + "gene_synonym", + "GI:90111086" + ], + [ + "gene_synonym", + "GeneID:944809" + ], + [ + "gene_synonym", + "JW0115" + ], + [ + "gene_synonym", + "NP_414661.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8E5" + ], + [ + "gene_synonym", + "b0119" + ], + [ + "gene_synonym", + "yacL" + ] + ], + "dna_sequence": "ATGGATTACGAATTTCTGCGCGATATTACCGGAGTGGTAAAGGTGCGTATGTCCATGGGGCATGAAGTGGTCGGGCACTGGTTTAATGAAGAGGTGAAAGAAAACCTGGCCTTGCTTGATGAAGTGGAACAAGCAGCGCACGCACTGAAAGGTAGCGAACGGTCCTGGCAACGGGCAGGGCATGAATACACCCTGTGGATGGACGGTGAAGAGGTGATGGTTCGCGCCAATCAACTGGAATTCGCTGGCGATGAAATGGAAGAGGGGATGAACTACTACGACGAAGAAAGCCTGTCGCTATGCGGCGTTGAGGATTTTCTGCAGGTCGTGGCGGCTTACCGCAATTTCGTGCAGCAGAAGTAA", + "dna_sequence_length": 363, + "functions": [ + "UPF0231 family protein" + ], + "id": "CDS_115", + "location": [ + [ + "NC_000913", + 134388, + "+", + 363 + ] + ], + "md5": "ce0985d1b27ebed07a604a60727d2b4c", + "parent_gene": "", + "protein_md5": "6b38f5ed43a61eea2ece7fb07abb5f4c", + "protein_translation": "MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000416" + ], + [ + "gene_synonym", + "ECK0119" + ], + [ + "gene_synonym", + "EcoGene:EG10962" + ], + [ + "gene_synonym", + "GI:16128113" + ], + [ + "gene_synonym", + "GeneID:947719" + ], + [ + "gene_synonym", + "JW0116" + ], + [ + "gene_synonym", + "NP_414662.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7F6" + ], + [ + "gene_synonym", + "b0120" + ], + [ + "gene_synonym", + "speD" + ] + ], + "dna_sequence": "TTGAAAAAACTGAAACTGCATGGCTTTAATAATCTGACCAAAAGTCTGAGTTTTTGTATTTACGATATCTGCTACGCCAAAACTGCCGAAGAGCGCGACGGTTATATTGCTTATATCGATGAACTCTATAATGCCAACCGTCTGACCGAAATCCTGTCAGAAACCTGTTCCATTATCGGGGCTAATATTCTTAACATCGCCCGCCAGGATTACGAACCACAGGGTGCCAGCGTCACTATTCTGGTGAGTGAAGAACCGGTTGACCCGAAACTCATCGACAAAACAGAACACCCCGGCCCACTGCCAGAAACGGTCGTTGCCCATCTTGATAAAAGTCATATTTGCGTACATACCTACCCGGAAAGTCATCCTGAAGGCGGTTTATGTACCTTCCGCGCCGATATTGAAGTCTCTACCTGCGGCGTGATTTCTCCGCTGAAGGCGCTGAATTACCTGATCCACCAGCTTGAGTCCGATATCGTAACCATTGATTATCGCGTGCGCGGTTTTACCCGCGACATTAACGGTATGAAGCACTTTATCGACCATGAGATTAATTCGATTCAGAACTTTATGTCTGACGATATGAAGGCGCTGTATGACATGGTGGATGTGAACGTCTATCAGGAAAATATCTTCCATACCAAGATGTTGCTTAAAGAGTTCGACCTTAAGCACTACATGTTCCACACCAAACCGGAAGACTTAACCGACAGCGAGCGCCAGGAAATTACCGCTGCGCTGTGGAAAGAAATGCGCGAGATTTATTACGGGCGCAATATGCCAGCTGTTTAA", + "dna_sequence_length": 795, + "functions": [ + "S-adenosylmethionine decarboxylase" + ], + "id": "CDS_116", + "location": [ + [ + "NC_000913", + 135582, + "-", + 795 + ] + ], + "md5": "c819242206274a8bfd4ed8dd4b7f711f", + "parent_gene": "", + "protein_md5": "48e7bddb5dbed6b3c40a806bdcf3efd5", + "protein_translation": "MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000418" + ], + [ + "gene_synonym", + "ECK0120" + ], + [ + "gene_synonym", + "EcoGene:EG10963" + ], + [ + "gene_synonym", + "GI:16128114" + ], + [ + "gene_synonym", + "GeneID:947726" + ], + [ + "gene_synonym", + "JW0117" + ], + [ + "gene_synonym", + "NP_414663.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09158" + ], + [ + "gene_synonym", + "b0121" + ], + [ + "gene_synonym", + "speE" + ] + ], + "dna_sequence": "ATGGCCGAAAAAAAACAGTGGCATGAAACGCTACACGACCAGTTTGGGCAGTACTTTGCGGTAGATAACGTTCTGTATCATGAAAAGACCGATCACCAGGATCTGATCATTTTTGAGAACGCTGCATTTGGTCGCGTAATGGCGCTGGATGGCGTAGTACAAACCACCGAGCGCGACGAGTTTATCTATCATGAGATGATGACCCATGTTCCGCTACTGGCCCATGGTCACGCGAAACATGTGCTGATTATCGGCGGCGGCGACGGTGCCATGCTGCGTGAAGTAACCCGACATAAAAACGTTGAGTCAATCACGATGGTGGAAATCGATGCGGGTGTCGTATCGTTCTGCCGTCAGTATCTACCCAACCATAACGCCGGTAGCTACGACGATCCGCGCTTTAAGCTGGTGATCGACGATGGCGTCAATTTCGTTAATCAAACCAGCCAGACCTTTGATGTCATTATCTCCGACTGCACCGATCCTATCGGTCCCGGCGAAAGCCTTTTCACTTCGGCATTTTATGAAGGCTGCAAACGTTGCCTGAATCCTGGCGGTATCTTCGTCGCACAAAACGGCGTCTGCTTTTTACAGCAGGAAGAAGCCATCGACAGCCATCGCAAACTCAGCCATTACTTCAGCGACGTTGGCTTTTATCAGGCGGCGATCCCGACCTATTACGGCGGTATCATGACTTTTGCATGGGCGACAGATAACGACGCCTTACGCCATCTCTCAACCGAAATTATTCAGGCGCGTTTTCTCGCCTCTGGCCTGAAATGCCGTTATTACAATCCGGCAATCCATACGGCAGCTTTTGCCTTACCTCAGTATCTGCAAGACGCACTGGCTTCACAGCCGTCCTAA", + "dna_sequence_length": 867, + "functions": [ + "spermidine synthase (putrescine aminopropyltransferase)" + ], + "id": "CDS_117", + "location": [ + [ + "NC_000913", + 136464, + "-", + 867 + ] + ], + "md5": "fe3acadf4ebab73002ae1624751b8710", + "parent_gene": "", + "protein_md5": "1c4eb8da7d0ef9335ecc32a9284914d4", + "protein_translation": "MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000423" + ], + [ + "gene_synonym", + "ECK0121" + ], + [ + "gene_synonym", + "EcoGene:EG11089" + ], + [ + "gene_synonym", + "GI:90111087" + ], + [ + "gene_synonym", + "GeneID:948472" + ], + [ + "gene_synonym", + "JW0118" + ], + [ + "gene_synonym", + "NP_414664.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA95" + ], + [ + "gene_synonym", + "b0122" + ], + [ + "gene_synonym", + "gspS" + ], + [ + "gene_synonym", + "yacC" + ] + ], + "dna_sequence": "ATGAAGACGTTTTTCAGAACAGTGTTATTCGGCAGCCTGATGGCCGTCTGCGCAAACAGTTACGCGCTCAGCGAGTCTGAAGCCGAAGATATGGCCGATTTAACGGCAGTTTTTGTCTTTCTGAAGAACGATTGTGGTTACCAGAACTTACCTAACGGGCAAATTCGTCGCGCACTGGTCTTTTTCGCTCAGCAAAACCAGTGGGACCTCAGTAATTACGACACCTTCGACATGAAAGCCCTCGGTGAAGACAGCTACCGCGATCTCAGCGGCATTGGCATTCCCGTCGCTAAAAAATGCAAAGCCCTGGCCCGCGATTCCTTAAGCCTGCTTGCCTACGTCAAATAA", + "dna_sequence_length": 348, + "functions": [ + "PulS_OutS family protein" + ], + "id": "CDS_118", + "location": [ + [ + "NC_000913", + 136917, + "-", + 348 + ] + ], + "md5": "4d4db90766d48691b2f918ad9727c123", + "parent_gene": "", + "protein_md5": "e1f11b794d647462366a094eeaf6a8b8", + "protein_translation": "MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000430" + ], + [ + "gene_synonym", + "ECK0122" + ], + [ + "gene_synonym", + "EcoGene:EG12318" + ], + [ + "gene_synonym", + "GI:16128116" + ], + [ + "gene_synonym", + "GeneID:947736" + ], + [ + "gene_synonym", + "JW0119" + ], + [ + "gene_synonym", + "NP_414665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36649" + ], + [ + "gene_synonym", + "b0123" + ], + [ + "gene_synonym", + "cueO" + ], + [ + "gene_synonym", + "cuiD" + ], + [ + "gene_synonym", + "yacK" + ] + ], + "dna_sequence": "ATGCAACGTCGTGATTTCTTAAAATATTCCGTCGCGCTGGGTGTGGCTTCGGCTTTGCCGCTGTGGAGCCGCGCAGTATTTGCGGCAGAACGCCCAACGTTACCGATCCCTGATTTGCTCACGACCGATGCCCGTAATCGCATTCAGTTAACTATTGGCGCAGGCCAGTCCACCTTTGGCGGGAAAACTGCAACTACCTGGGGCTATAACGGCAATCTGCTGGGGCCGGCGGTGAAATTACAGCGCGGCAAAGCGGTAACGGTTGATATCTACAACCAACTGACGGAAGAGACAACGTTGCACTGGCACGGGCTGGAAGTACCGGGTGAAGTCGACGGCGGCCCGCAGGGAATTATTCCGCCAGGTGGCAAGCGCTCGGTGACGTTGAACGTTGATCAACCTGCCGCTACCTGCTGGTTCCATCCGCATCAGCACGGCAAAACCGGGCGACAGGTGGCGATGGGGCTGGCTGGGCTGGTGGTGATTGAAGATGACGAGATCCTGAAATTAATGCTGCCAAAACAGTGGGGTATCGATGATGTTCCGGTGATCGTTCAGGATAAGAAATTTAGCGCCGACGGGCAGATTGATTATCAACTGGATGTGATGACCGCCGCCGTGGGCTGGTTTGGCGATACGTTGCTGACCAACGGTGCAATCTACCCGCAACACGCTGCCCCGCGTGGTTGGCTGCGCCTGCGTTTGCTCAATGGCTGTAATGCCCGTTCGCTCAATTTCGCCACCAGCGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGCTGCAACTCTCTATGGACCCGATGCTCGATATGATGGGGATGCAGATGCTAATGGAGAAATATGGCGATCAGGCGATGGCCGGGATGGATCACAGCCAGATGATGGGCCATATGGGGCACGGCAATATGAATCATATGAACCACGGCGGGAAGTTCGATTTCCACCATGCCAACAAAATCAACGGTCAGGCGTTTGATATGAACAAGCCGATGTTTGCGGCGGCGAAAGGGCAATACGAACGTTGGGTTATCTCTGGCGTGGGCGACATGATGCTGCATCCGTTCCATATCCACGGCACGCAGTTCCGTATCTTGTCAGAAAATGGCAAACCGCCAGCGGCTCATCGCGCGGGCTGGAAAGATACCGTTAAGGTAGAAGGTAATGTCAGCGAAGTGCTGGTGAAGTTTAATCACGATGCACCGAAAGAACATGCTTATATGGCGCACTGCCATCTGCTGGAGCATGAAGATACGGGGATGATGTTAGGGTTTACGGTATAA", + "dna_sequence_length": 1551, + "functions": [ + "multicopper oxidase (laccase)" + ], + "id": "CDS_119", + "location": [ + [ + "NC_000913", + 137083, + "+", + 1551 + ] + ], + "md5": "1c57192cabf3bcacfb9d65cc1b5c8df5", + "parent_gene": "", + "protein_md5": "df83bbbcf448f87b83a1a04813cb824e", + "protein_translation": "MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV", + "protein_translation_length": 516, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000433" + ], + [ + "gene_synonym", + "ECK0123" + ], + [ + "gene_synonym", + "EcoGene:EG10369" + ], + [ + "gene_synonym", + "GI:16128117" + ], + [ + "gene_synonym", + "GeneID:944830" + ], + [ + "gene_synonym", + "JW0120" + ], + [ + "gene_synonym", + "NP_414666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15877" + ], + [ + "gene_synonym", + "b0124" + ], + [ + "gene_synonym", + "gcd" + ] + ], + "dna_sequence": "ATGGCAATTAACAATACAGGCTCGCGACGATTACTCGTCACGCTAACAGCCCTTTTTGCAGCGCTTTGCGGGCTGTATCTACTCATTGGCGGAGGCTGGCTGGTCGCGATTGGCGGCTCCTGGTACTACCCTATCGCTGGCCTTGTGATGCTCGGCGTCGCCTGGATGCTGTGGCGCAGTAAACGCGCCGCGCTTTGGCTATACGCAGCCCTGCTGCTCGGCACCATGATTTGGGGCGTCTGGGAAGTTGGTTTCGACTTCTGGGCGCTGACTCCGCGCAGCGACATTCTGGTCTTCTTCGGCATCTGGCTGATCCTGCCGTTTGTCTGGCGTCGCCTGGTCATTCCTGCCAGCGGCGCAGTTGCCGCACTGGTGGTCGCACTGCTGATTAGCGGTGGTATCCTGACCTGGGCCGGATTTAACGATCCGCAGGAGATCAACGGCACCTTAAGCGCCGATGCCACACCTGCTGAAGCTATCTCCCCCGTAGCCGATCAGGACTGGCCTGCCTATGGTCGTAATCAGGAAGGTCAACGCTTTTCGCCGCTGAAACAAATTAACGCCGATAACGTCCATAATCTGAAAGAAGCCTGGGTGTTCCGTACTGGCGATGTGAAGCAGCCGAACGATCCGGGTGAAATCACCAATGAAGTGACGCCGATTAAAGTGGGCGACACCCTTTACCTGTGTACCGCTCACCAGCGCCTGTTTGCGCTTGATGCCGCCAGCGGCAAAGAGAAATGGCATTACGATCCTGAGCTGAAAACCAACGAGTCTTTCCAGCACGTAACCTGCCGTGGTGTCTCTTATCATGAAGCCAAAGCAGAAACCGCTTCGCCGGAAGTGATGGCGGATTGCCCGCGTCGTATCATTCTTCCGGTCAATGATGGTCGACTGATTGCGATTAACGCTGAAAACGGCAAACTGTGCGAAACCTTCGCCAATAAAGGCGTGCTCAATCTGCAAAGCAATATGCCAGACACCAAACCGGGTCTGTATGAACCGACTTCGCCACCGATTATCACCGATAAAACCATCGTGATGGCCGGTTCAGTTACCGATAACTTCTCAACCCGCGAAACGTCTGGCGTGATCCGTGGTTTTGATGTCAACACCGGGGAGCTGCTGTGGGCTTTTGATCCCGGCGCGAAAGATCCGAACGCAATCCCGTCTGACGAACACACCTTTACCTTTAACTCGCCAAACTCCTGGGCACCAGCGGCCTATGACGCGAAGCTGGATCTGGTCTATCTGCCGATGGGCGTGACCACGCCGGATATCTGGGGCGGTAACCGCACACCGGAACAGGAACGTTATGCCAGCTCGATTCTGGCGCTGAATGCCACTACCGGGAAACTGGCGTGGAGCTACCAGACCGTTCACCACGACCTGTGGGACATGGATCTTCCGGCACAGCCGACGCTGGCGGACATCACCGTTAATGGTCAGAAAGTGCCAGTTATTTACGCTCCGGCGAAAACCGGCAACATTTTTGTGCTCGATCGTCGTAATGGCGAACTGGTGGTTCCGGCACCGGAAAAACCGGTTCCCCAAGGTGCAGCGAAAGGCGATTACGTAACCCCAACTCAACCGTTTTCTGAACTGAGCTTCCGTCCGACGAAAGATTTGAGCGGTGCGGATATGTGGGGAGCCACCATGTTTGACCAACTGGTGTGCCGCGTGATGTTCCACCAGATGCGCTATGAAGGCATTTTCACCCCGCCATCTGAACAGGGTACGCTGGTCTTCCCGGGTAACCTGGGGATGTTCGAATGGGGCGGGATTTCCGTTGATCCAAATCGTGAAGTGGCGATTGCCAACCCAATGGCACTGCCGTTTGTTTCGAAACTGATCCCGCGTGGTCCTGGCAACCCGATGGAGCAGCCGAAAGATGCCAAAGGCACGGGTACGGAATCCGGCATTCAGCCACAGTACGGTGTACCGTATGGTGTCACGCTCAACCCGTTCCTCTCACCATTTGGTCTGCCATGTAAACAGCCAGCATGGGGTTATATCTCGGCGCTGGATCTGAAAACTAATGAAGTGGTGTGGAAGAAACGTATTGGTACGCCGCAGGACAGTATGCCGTTCCCGATGCCGGTTCCGGTGCCGTTCAATATGGGTATGCCGATGCTGGGCGGGCCAATCTCCACGGCGGGTAACGTGCTGTTTATCGCCGCTACGGCAGATAACTACCTGCGCGCTTACAACATGAGCAACGGTGAAAAACTGTGGCAGGGTCGTTTACCAGCGGGTGGTCAGGCTACGCCAATGACCTATGAAGTGAATGGTAAGCAGTATGTGGTGATCTCCGCAGGCGGTCACGGTTCATTTGGTACGAAGATGGGCGACTATATTGTGGCTTATGCGCTGCCGGATGATGTGAAGTAA", + "dna_sequence_length": 2391, + "functions": [ + "glucose dehydrogenase" + ], + "id": "CDS_120", + "location": [ + [ + "NC_000913", + 141225, + "-", + 2391 + ] + ], + "md5": "38f96c63dc15a86c390be21a175e6e7c", + "parent_gene": "", + "protein_md5": "0684fb357355e8f0b8e6dfdf1d16760b", + "protein_translation": "MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSADATPAEAISPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK", + "protein_translation_length": 796, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000440" + ], + [ + "gene_synonym", + "ECK0124" + ], + [ + "gene_synonym", + "EcoGene:EG20098" + ], + [ + "gene_synonym", + "GI:90111088" + ], + [ + "gene_synonym", + "GeneID:946624" + ], + [ + "gene_synonym", + "JW5009" + ], + [ + "gene_synonym", + "NP_414667.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9M2" + ], + [ + "gene_synonym", + "b0125" + ], + [ + "gene_synonym", + "hpt" + ] + ], + "dna_sequence": "ATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGGTGCTGGTGGGTCTGCTGCGTGGCTCATTTATGTTTATGGCGGACCTGTGCCGTGAAGTTCAGGTATCTCATGAAGTCGACTTTATGACCGCCTCCAGCTACGGTAGCGGCATGTCCACCACCCGTGATGTGAAAATCCTCAAAGATCTGGATGAAGATATCCGTGGCAAGGACGTGCTGATTGTTGAAGATATCATCGACTCGGGGAATACACTGTCGAAAGTGCGTGAGATCTTAAGCCTGCGCGAACCGAAGTCGCTGGCGATTTGTACGCTGCTGGATAAACCGTCCCGTCGTGAAGTGAACGTCCCGGTAGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAA", + "dna_sequence_length": 537, + "functions": [ + "hypoxanthine phosphoribosyltransferase" + ], + "id": "CDS_121", + "location": [ + [ + "NC_000913", + 141431, + "+", + 537 + ] + ], + "md5": "347c34122c6f5cec9a5f46151203600c", + "parent_gene": "", + "protein_md5": "83e24d1b011dea566c31f593927c9702", + "protein_translation": "MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000442" + ], + [ + "gene_synonym", + "ECK0125" + ], + [ + "gene_synonym", + "EcoGene:EG12319" + ], + [ + "gene_synonym", + "GI:16128119" + ], + [ + "gene_synonym", + "GeneID:944832" + ], + [ + "gene_synonym", + "JW0122" + ], + [ + "gene_synonym", + "NP_414668.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61517" + ], + [ + "gene_synonym", + "b0126" + ], + [ + "gene_synonym", + "can" + ], + [ + "gene_synonym", + "yadF" + ] + ], + "dna_sequence": "ATGAAAGACATAGATACACTCATCAGCAACAATGCACTATGGTCAAAAATGCTGGTGGAAGAGGATCCCGGGTTTTTTGAGAAACTGGCACAAGCGCAAAAACCGCGCTTTCTATGGATTGGATGTTCCGACAGTCGCGTTCCTGCAGAACGTTTAACCGGTCTTGAGCCGGGCGAACTCTTTGTTCACCGTAATGTTGCTAACCTGGTCATTCACACTGACCTGAACTGCCTTTCCGTGGTTCAGTATGCAGTGGATGTACTCGAAGTTGAACACATTATTATCTGTGGCCACTACGGTTGCGGCGGCGTACAAGCCGCAGTTGAAAACCCGGAACTGGGGCTTATCAACAACTGGCTGCTGCATATCCGCGATATCTGGTTCAAACATAGCTCATTGCTCGGCGAAATGCCGCAAGAGCGCCGTCTGGATACCTTGTGTGAACTGAACGTCATGGAACAGGTGTATAACCTGGGCCACTCCACCATTATGCAATCAGCGTGGAAACGCGGGCAGAAAGTTACCATTCACGGCTGGGCCTACGGCATTCACGACGGCTTGCTGCGTGATCTGGATGTTACCGCCACCAACCGCGAAACCCTTGAGCAACGTTACCGTCACGGGATTTCCAACCTCAAGCTGAAACACGCCAACCACAAATAA", + "dna_sequence_length": 663, + "functions": [ + "carbonic anhydrase" + ], + "id": "CDS_122", + "location": [ + [ + "NC_000913", + 142670, + "-", + 663 + ] + ], + "md5": "e24080e36e9458b11a636aed11676261", + "parent_gene": "", + "protein_md5": "7a19fc763018cea7a941ca7feb7122bf", + "protein_translation": "MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHANHK", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000447" + ], + [ + "gene_synonym", + "ECK0126" + ], + [ + "gene_synonym", + "EcoGene:EG12320" + ], + [ + "gene_synonym", + "GI:16128120" + ], + [ + "gene_synonym", + "GeneID:944833" + ], + [ + "gene_synonym", + "JW0123" + ], + [ + "gene_synonym", + "NP_414669.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36879" + ], + [ + "gene_synonym", + "b0127" + ], + [ + "gene_synonym", + "yadG" + ] + ], + "dna_sequence": "ATGACCATTGCACTGGAACTTCAACAGCTTAAAAAAACCTATCCAGGCGGCGTTCAGGCGCTTCGTGGGATAGATTTGCAGGTCGAAGCGGGTGATTTTTATGCGCTTCTCGGGCCGAACGGGGCCGGGAAATCGACCACTATCGGTATTATCAGCTCTCTGGTAAATAAAACCTCCGGGCGGGTCAGCGTATTTGGTTACGATCTCGAGAAGGATGTCGTGAACGCTAAACGTCAGTTGGGACTGGTGCCGCAGGAATTTAACTTCAACCCGTTTGAAACCGTGCAGCAAATTGTGGTGAATCAGGCAGGGTACTACGGCGTGGAGCGCAAAGAAGCGTACATCCGCAGCGAAAAGTATCTTAAACAACTCGATCTATGGGGAAAACGCAACGAACGTGCGCGTATGTTATCTGGCGGGATGAAGCGCCGTTTAATGATTGCCCGTGCGTTAATGCATGAACCTAAACTACTGATTCTCGACGAACCGACCGCAGGCGTGGATATTGAACTTCGCCGCTCAATGTGGGGCTTTTTGAAGGATTTAAACGACAAAGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGTGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCACCGAAAAGCCCGTTACCGAAGCTCGATGGCTATCAGTATCGACTGGTCGATACCGCGACGCTGGAAGTTGAAGTGCTGCGTGAGCAGGGGATCAACAGCGTATTTACGCAGTTAAGTGAGCAGGGCATTCAGGTATTAAGTATGCGTAACAAAGCTAACCGTCTGGAAGAGCTGTTTGTTTCACTGGTTAATGAAAAACAAGGAGATCGCGCATGA", + "dna_sequence_length": 927, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_123", + "location": [ + [ + "NC_000913", + 142779, + "+", + 927 + ] + ], + "md5": "daf0efb3ae733f8a6ccc21453a6e8fcd", + "parent_gene": "", + "protein_md5": "18acf8210d82c9f9aedc74c99466b051", + "protein_translation": "MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLVNEKQGDRA", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000450" + ], + [ + "gene_synonym", + "ECK0127" + ], + [ + "gene_synonym", + "EcoGene:EG12321" + ], + [ + "gene_synonym", + "GI:16128121" + ], + [ + "gene_synonym", + "GeneID:944836" + ], + [ + "gene_synonym", + "JW0124" + ], + [ + "gene_synonym", + "NP_414670.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFN6" + ], + [ + "gene_synonym", + "b0128" + ], + [ + "gene_synonym", + "yadH" + ] + ], + "dna_sequence": "ATGATGCATCTTTACTGGGTGGCGCTAAAAAGCATCTGGGCGAAAGAGATCCATCGCTTTATGCGTATCTGGGTGCAGACGCTGGTGCCGCCAGTCATCACCATGACCCTTTACTTTATTATCTTCGGTAACCTGATTGGTTCGCGTATTGGCGATATGCATGGCTTCAGCTATATGCAGTTCATCGTACCGGGGCTGATCATGATGTCGGTGATCACCAATGCCTACGCCAACGTTGCGTCATCATTTTTTGGTGCCAAGTTCCAGCGTAATATTGAAGAGCTGCTGGTAGCGCCGGTTCCGACTCACGTCATTATTGCCGGATATGTCGGCGGTGGCGTGGCGCGTGGTCTGTTTGTTGGCATTCTGGTGACGGCAATTTCACTGTTTTTTGTGCCATTTCAGGTGCATTCGTGGGTATTCGTTGCCTTAACGCTGGTGCTCACGGCGGTGTTGTTCTCCCTTGCGGGTTTGCTGAACGGTGTGTTTGCCAAAACGTTCGATGACATCAGCCTGGTGCCAACCTTTGTGTTAACGCCACTCACGTATTTGGGCGGGGTCTTTTACTCACTGACTTTGTTGCCGCCGTTCTGGCAAGGGCTGTCGCACCTGAACCCAATCGTTTATATGATCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAA", + "dna_sequence_length": 771, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_124", + "location": [ + [ + "NC_000913", + 143702, + "+", + 771 + ] + ], + "md5": "54a08dccd0aead8b26eec27035a4bf14", + "parent_gene": "", + "protein_md5": "b33785388ed7fee27027fd1c6f05e055", + "protein_translation": "MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000453" + ], + [ + "gene_synonym", + "ECK0128" + ], + [ + "gene_synonym", + "EcoGene:EG12322" + ], + [ + "gene_synonym", + "GI:16128122" + ], + [ + "gene_synonym", + "GeneID:947397" + ], + [ + "gene_synonym", + "JW0125" + ], + [ + "gene_synonym", + "NP_414671.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36881" + ], + [ + "gene_synonym", + "agaX" + ], + [ + "gene_synonym", + "b0129" + ], + [ + "gene_synonym", + "yadI" + ] + ], + "dna_sequence": "ATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATACTGGATGCGCTGGAGAAAAAACATGGGGCACTTCTTCAGTGCCGGGCCGTGAATTTCTGGCGCGGATTAAGCTCTAATATGCTCAGCCGCATGATGTGCGATGCTCTGCATGAAGCGGACTCTGGTGAGGGTGTCATCTTCTTAACCGATATAGCCGGAGCGCCACCGTATCGCGTGGCTTCATTATTAAGCCACAAACACTCCCGTTGCGAAGTGATTTCTGGTGTCACGTTACCGTTAATTGAACAGATGATGGCTTGCCGTGAAACCATGACCAGTTCAGAGTTTCGCGAGCGTATTGTCGAACTGGGTGCGCCGGAGGTGAGTAGTCTTTGGCACCAACAACAAAAAAATCCGCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAA", + "dna_sequence_length": 441, + "functions": [ + "putative PTS Enzyme IIA" + ], + "id": "CDS_125", + "location": [ + [ + "NC_000913", + 144577, + "+", + 441 + ] + ], + "md5": "f36ddd0beb4c8aae99b60a30b3369675", + "parent_gene": "", + "protein_md5": "7ce8c621e72a670ddf90e4b63bf9c0ae", + "protein_translation": "MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNMLSRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMACRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000457" + ], + [ + "gene_synonym", + "ECK0129" + ], + [ + "gene_synonym", + "EcoGene:EG11749" + ], + [ + "gene_synonym", + "GI:16128123" + ], + [ + "gene_synonym", + "GeneID:946536" + ], + [ + "gene_synonym", + "JW0126" + ], + [ + "gene_synonym", + "NP_414672.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31666" + ], + [ + "gene_synonym", + "b0130" + ], + [ + "gene_synonym", + "yadE" + ] + ], + "dna_sequence": "ATGTACAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGTGTCAGTGCCGCGTTACCTGCCCGTTATATGCAAACCATCGAAAATGCTGCGGTCTGGGCGCAAATTGGTGACAAGATGGTGACCGTGGGGAATATTCGGGCCGGACAAATCATTGCCGTGGAGCCCACTGCCGCAAGTTATTACGCATTTAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATACGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGACTGGCCTATATCAGCGCACTGGATGCCCAACCCGATAATGGCCTGTCGGTGCTAACCTATCACCATATTCTGCGCGACGAAGAAAACACCCGTTTTCGCCATACTTCGACGACCACATCGGTACGCGCTTTCAATAACCAGATGGCCTGGCTGCGTGACAGGGGATACGCGACACTGAGCATGGTGCAGCTGGAAGGCTACGTGAAGAATAAGATCAATCTCCCTGCGCGAGCGGTGGTGATTACCTTTGATGATGGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTGTTGAAACAATATGGCATGAAGGCGACGGCGTTTATTGTTACCTCACGCATCAAACGTCACCCGCAGAAGTGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAGCTTAACGAAATTCGCGATGTATTTGATTTCCAGTCACATACCCATTTTTTGCATCGGGTAGATGGTTATCGCCGACCCATATTACTGAGCCGTAGTGAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCGCATGTCTGGTATCTTTCGTATCCGTTTGGCGGATTTAATGACAACGCCGTGAAGGCAGCAAACGATGCCGGATTTCACCTGGCGGTGACAACCATGAAAGGCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAA", + "dna_sequence_length": 1230, + "functions": [ + "putative polysaccharide deacetylase lipoprotein" + ], + "id": "CDS_126", + "location": [ + [ + "NC_000913", + 145081, + "+", + 1230 + ] + ], + "md5": "e03e0cb966de94472ad797948b36daa1", + "parent_gene": "", + "protein_md5": "b26774612c6f6aadea625a7b0f20debf", + "protein_translation": "MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPSAGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLSVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQLEGYVKNKINLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLVSNQPQG", + "protein_translation_length": 409, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000459" + ], + [ + "gene_synonym", + "ECK0130" + ], + [ + "gene_synonym", + "EcoGene:EG11747" + ], + [ + "gene_synonym", + "GI:16128124" + ], + [ + "gene_synonym", + "GeneID:945686" + ], + [ + "gene_synonym", + "JW0127" + ], + [ + "gene_synonym", + "NP_414673.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A790" + ], + [ + "gene_synonym", + "b0131" + ], + [ + "gene_synonym", + "panD" + ] + ], + "dna_sequence": "ATGATTCGCACGATGCTGCAGGGCAAACTCCACCGCGTGAAAGTGACTCATGCGGACCTGCACTATGAAGGTTCTTGCGCCATTGACCAGGATTTTCTTGACGCAGCCGGTATTCTCGAAAACGAAGCCATTGATATCTGGAATGTCACCAACGGCAAGCGTTTCTCCACTTATGCCATCGCGGCAGAACGCGGTTCGAGAATTATTTCTGTTAACGGTGCGGCGGCCCACTGCGCCAGTGTCGGCGATATTGTCATCATCGCCAGCTTCGTTACCATGCCAGATGAAGAAGCTCGCACCTGGCGACCCAACGTCGCCTATTTTGAAGGCGACAATGAAATGAAACGTACCGCGAAAGCGATTCCGGTACAGGTTGCTTGA", + "dna_sequence_length": 381, + "functions": [ + "aspartate 1-decarboxylase" + ], + "id": "CDS_127", + "location": [ + [ + "NC_000913", + 146694, + "-", + 381 + ] + ], + "md5": "4d46986dc9396ce8addce35c9c415e1a", + "parent_gene": "", + "protein_md5": "0c4b65c44498a22741210287e17540e2", + "protein_translation": "MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKAIPVQVA", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000463" + ], + [ + "gene_synonym", + "ECK0131" + ], + [ + "gene_synonym", + "EcoGene:EG11748" + ], + [ + "gene_synonym", + "GI:16128125" + ], + [ + "gene_synonym", + "GeneID:944781" + ], + [ + "gene_synonym", + "JW5010" + ], + [ + "gene_synonym", + "NP_414674.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31665" + ], + [ + "gene_synonym", + "b0132" + ], + [ + "gene_synonym", + "yadD" + ] + ], + "dna_sequence": "ATGGATGCACCGAGTACCACACCGCATGACGCGGTATTTAAACAATTTTTAATGCATGCGGAGACGGCTCGCGACTTTCTGGAGATACATTTGCCAGTGGAATTACGCGAACTTTGTGACCTCAACACGCTTCATTTAGAGTCGGGGAGTTTCATTGAAGAGAGCCTGAAAGGACACAGCACGGACGTGCTCTATTCCGTGCAAATGCAGGGCAATCCCGGTTATCTGCATGTTGTGATTGAACACCAAAGCAAGCCGGATAAGAAAATGGCCTTTCGCATGATGCGTTATTCTATAGCCGCCATGCACCGGCATCTGGAGGCTGACCACGATAAGCTGCCGCTGGTGGTGCCGATACTGTTTTATCAGGGCGAGGCCACACCTTATCCGCTATCAATGTGCTGGTTTGATATGTTTTACTCGCCGGAGCTGGCGCGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACCATCACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTACTGCAAAAACATATTCGCCAGCGCGACTTAATGTTATTGCTTGAGCAACTGGTCACGCTGATCGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACTATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTACGGTGTGTTGAGAGACAGGGAAACGGGAGGGGAGTCTATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAAGTAAGTCAGGAATTCGCCCAGCGTCTTCTGAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTGATAAGGTAATTAACCTTATTTAA", + "dna_sequence_length": 903, + "functions": [ + "transposase_31 family protein" + ], + "id": "CDS_128", + "location": [ + [ + "NC_000913", + 146968, + "+", + 903 + ] + ], + "md5": "0c217e0256d7e1cca1a98d30bb90e3c8", + "parent_gene": "", + "protein_md5": "f8c2a3bed8a22a88dff6e7b5ed82af79", + "protein_translation": "MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEVSQEFAQRLLSKGMSREDVAEMANLPLAEIDKVINLI", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000465" + ], + [ + "gene_synonym", + "ECK0132" + ], + [ + "gene_synonym", + "EcoGene:EG11746" + ], + [ + "gene_synonym", + "GI:16128126" + ], + [ + "gene_synonym", + "GeneID:944958" + ], + [ + "gene_synonym", + "JW0129" + ], + [ + "gene_synonym", + "NP_414675.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31663" + ], + [ + "gene_synonym", + "b0133" + ], + [ + "gene_synonym", + "panC" + ] + ], + "dna_sequence": "GTGTTAATTATCGAAACCCTGCCGCTGCTGCGTCAGCAAATTCGCCGCCTGCGTATGGAAGGCAAGCGCGTGGCGCTGGTGCCTACCATGGGTAACCTGCACGATGGCCATATGAAGCTGGTCGACGAAGCCAAAGCCCGCGCCGATGTGGTCGTCGTCAGTATTTTCGTTAACCCGATGCAGTTCGACCGCCCGGAAGATCTGGCTCGTTATCCACGGACCTTGCAGGAGGACTGCGAGAAGCTAAACAAACGTAAAGTGGATTTAGTTTTCGCCCCTTCGGTAAAAGAGATCTACCCGAACGGTACTGAAACCCACACTTACGTTGACGTTCCTGGCCTTTCGACCATGCTGGAAGGTGCCAGCCGTCCGGGACATTTTCGCGGCGTTTCGACTATTGTCAGCAAGCTGTTCAACCTGGTCCAGCCGGACATCGCCTGCTTCGGTGAAAAAGATTTTCAGCAACTGGCGCTGATCCGCAAAATGGTTGCCGATATGGGCTTCGATATTGAGATTGTCGGTGTGCCAATTATGCGCGCCAAAGACGGTCTGGCGCTAAGTTCCCGTAACGGTTATCTGACGGCGGAACAACGCAAAATTGCGCCTGGTCTGTACAAAGTTTTAAGTTCGATTGCTGACAAATTGCAGGCTGGGGAACGGGATCTCGATGAAATTATTACCATTGCGGGGCAAGAACTGAATGAAAAAGGCTTCCGCGCCGATGATATTCAGATTCGCGATGCCGACACATTGCTGGAAGTTTCTGAAACCAGCAAACGGGCAGTAATTCTGGTAGCCGCCTGGCTTGGCGATGCTCGCCTGATCGACAACAAAATGGTCGAGCTGGCGTAA", + "dna_sequence_length": 852, + "functions": [ + "pantothenate synthetase" + ], + "id": "CDS_129", + "location": [ + [ + "NC_000913", + 148795, + "-", + 852 + ] + ], + "md5": "b4c4b1538a75413294642d61edf5e8ff", + "parent_gene": "", + "protein_md5": "4b6b69c8934ce88643461a12c57bfc30", + "protein_translation": "MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIITIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLIDNKMVELA", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000467" + ], + [ + "gene_synonym", + "ECK0133" + ], + [ + "gene_synonym", + "EcoGene:EG11675" + ], + [ + "gene_synonym", + "GI:16128127" + ], + [ + "gene_synonym", + "GeneID:944839" + ], + [ + "gene_synonym", + "JW0130" + ], + [ + "gene_synonym", + "NP_414676.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31057" + ], + [ + "gene_synonym", + "b0134" + ], + [ + "gene_synonym", + "panA" + ], + [ + "gene_synonym", + "panB" + ] + ], + "dna_sequence": "ATGAAACCGACCACCATCTCCTTACTGCAGAAGTACAAACAGGAAAAAAAACGTTTCGCGACCATCACCGCTTATGACTATAGCTTCGCCAAACTCTTTGCTGATGAAGGGCTTAACGTCATGCTGGTGGGCGATTCGCTGGGCATGACGGTTCAGGGGCACGACTCCACCCTGCCAGTTACCGTTGCCGATATCGCCTACCACACTGCCGCCGTACGTCGCGGCGCACCAAACTGCCTGCTGCTGGCTGACCTGCCGTTTATGGCGTATGCCACGCCGGAACAAGCCTTCGAAAACGCCGCAACGGTTATGCGTGCCGGTGCTAACATGGTCAAAATTGAAGGCGGTGAGTGGCTGGTAGAAACCGTACAAATGCTGACCGAACGTGCCGTTCCTGTATGTGGTCACTTAGGTTTAACACCACAGTCAGTGAATATTTTCGGTGGCTACAAAGTTCAGGGGCGCGGCGATGAAGCGGGCGATCAACTGCTCAGCGATGCATTAGCCTTAGAAGCTGCTGGGGCACAGCTGCTGGTGCTGGAATGCGTGCCGGTTGAACTGGCAAAACGTATTACCGAAGCACTGGCGATCCCGGTTATTGGCATTGGCGCAGGCAACGTCACTGACGGGCAGATCCTCGTGATGCACGACGCCTTTGGTATTACCGGCGGTCACATTCCTAAATTCGCTAAAAATTTCCTCGCCGAAACGGGCGACATCCGCGCGGCTGTGCGGCAGTATATGGCTGAAGTGGAGTCCGGCGTTTATCCGGGCGAAGAACACAGTTTCCATTAA", + "dna_sequence_length": 795, + "functions": [ + "3-methyl-2-oxobutanoate hydroxymethyltransferase" + ], + "id": "CDS_130", + "location": [ + [ + "NC_000913", + 149601, + "-", + 795 + ] + ], + "md5": "a707587dbc80949e79815cb00047f5e3", + "parent_gene": "", + "protein_md5": "4e89fea41ab6715763352adf9b1b33c2", + "protein_translation": "MKPTTISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000470" + ], + [ + "gene_synonym", + "ECK0134" + ], + [ + "gene_synonym", + "EcoGene:EG11678" + ], + [ + "gene_synonym", + "GI:16128128" + ], + [ + "gene_synonym", + "GeneID:944837" + ], + [ + "gene_synonym", + "JW0131" + ], + [ + "gene_synonym", + "NP_414677.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31058" + ], + [ + "gene_synonym", + "b0135" + ], + [ + "gene_synonym", + "yadC" + ] + ], + "dna_sequence": "ATGAAGACTATCTTCAGGTACATTCTTTTTTTAGCACTGTATTCTTGTTGTAATACAGTCAGTGCATATACAAGTTTTATTGTGGGAAATAATGCAGGAGTTGATAACTATCGAGGCCCCTCCACTGCCGCACAGATGACCTTTAATTACACATCAACAGCAAGCAACTTGGTTTTTTATAAACCCACGCAGCTCGGCCCGACTGGGGTAAAAATGTACTGGTCATACCTGGATACAGGTACCGGTGGTGGTATTCTTTACTGCAATACATCTGGCAGAGCGAATCCTGGTCCAATAACTATTGAAAATGCCATGGTCTATTCAGGTAAAGATTATGGCGGACATAAACTATTTAATACATCTGTTCCTGGTCTGTATTACACCATGTTAATATCAAGGGTCTGGTCTGCATACGATACAATAACTGACATTCAATCGCCAGGAATCTATATCGGAGATCCTTCCAACCAAGAATTTTTCTTTTCCGTCACAGACAGCGATCTACAAACTAAGGGTTGCAACAAAGCAGACGACTACGATAAGTTTTGGGCTATTGGTGGTATAGTACACAACATAACTGTTGAATTTTATACAGATACTAATTTCGATCCTACACTTAATCAGCAAGTCCAGTTATCCAGTTCATCAAATTACCTTTATTCGTTTAAGGCCTACAGTCCTGGTACAAAAGTTGTAGATCACAGCAACCACATTTATGTCAATTTCACACTGAATAATGTCAAATTAACCTTACCAACATGTTTTACCTCCATACTTACCGGGCCATCAGTCAATGGTTCAACGGTTAGAATGGGAGAATATAGCTCTGGGACAATTAAAAATGGCGCTTCACCTGTTCCCTTTGATATCTCGCTTCAGAATTGTATTCGTGTGCGTAATATTGAAACAAAACTCGTCACTGGAAAAGTAGGTACTCAAAACACACAACTGCTTGGTAATACGCTTACTGGAAGCACTGCCGCCAAAGGCGTTGGCGTACTCATTGAAGGTTTAGCAACCAGTAAAAATCCGCTAATGACATTAAAACCTAATGATACGAATTCTGTTTATATAGATTATGAAACCGAAGATGACACCTCCGATGGGGTTTACCCTAATCAAGGTAACGGCACATCACAGCCTCTTCATTTCCAGGCAACATTAAAGCAAGACGGGAATATTGCTATCGAACCCGGCGAATTTAAAGCCACCAGTACTTTCCAGGTAACCTATCCCTGA", + "dna_sequence_length": 1239, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_131", + "location": [ + [ + "NC_000913", + 150953, + "-", + 1239 + ] + ], + "md5": "a49196bbb0f503153fca8f5b91988ca0", + "parent_gene": "", + "protein_md5": "999e4039acde2b14be8837264a28b5d2", + "protein_translation": "MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAAQMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIENAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNYLYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTFQVTYP", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000472" + ], + [ + "gene_synonym", + "ECK0135" + ], + [ + "gene_synonym", + "EcoGene:EG12325" + ], + [ + "gene_synonym", + "GI:16128129" + ], + [ + "gene_synonym", + "GeneID:944835" + ], + [ + "gene_synonym", + "JW0132" + ], + [ + "gene_synonym", + "NP_414678.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37016" + ], + [ + "gene_synonym", + "b0136" + ], + [ + "gene_synonym", + "yadK" + ] + ], + "dna_sequence": "ATGCATCCCACTCAACGTAAGCTGATGAAGAGAATAATTCTGTTTCTGTCATTACTGTTTTGCATCGCCTGTCCAGCCATTGCTGGACAGGATATTGACCTTGTTGCCAATGTAAAAAACAGCACCTGCAAAAGCGGAATCAGTAACCAGGGTAATATTGATCTTGGCGTCGTTGGGGTGGGATATTTTTCAGGTAATGTTACTCCTGAAAGTTATCAACCAGGTGGAAAAGAGTTCACTATCACTGTATCCGACTGTGCATTACAGGGAACTGGCGATGTGCTAAATCAGTTACATATTGATTTTAGAGCCCTTAGCGGTGTCATGGCTGCTGGCTCTAGGCAAATATTTGCTAATGAAATTTCGTCAGGAGCAAGTAATGTAGGAGTAGTTATATTTTCTACTCAGGATTCGGCGAATACATTCAATGTTCTTAATGCTTCAGGCGGATCTCGTTCCGTTTATCCAGTAATGTCGGATGACATGAATGGTTCATCCTGGAAATTTAGCACCCGAATGCAAAAAATCGATCCTGCATTGAGTGTTACATCTGGTCAACTTATGAGCCATGTGTTAGTGGATATTTACTACGAATAA", + "dna_sequence_length": 597, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_132", + "location": [ + [ + "NC_000913", + 151599, + "-", + 597 + ] + ], + "md5": "c454bd467f3b216649fd41bc76c964e3", + "parent_gene": "", + "protein_md5": "16b02670050e71951c1747a616553447", + "protein_translation": "MHPTQRKLMKRIILFLSLLFCIACPAIAGQDIDLVANVKNSTCKSGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDFRALSGVMAAGSRQIFANEISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSDDMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000475" + ], + [ + "gene_synonym", + "ECK0136" + ], + [ + "gene_synonym", + "EcoGene:EG12326" + ], + [ + "gene_synonym", + "GI:16128130" + ], + [ + "gene_synonym", + "GeneID:944829" + ], + [ + "gene_synonym", + "JW0133" + ], + [ + "gene_synonym", + "NP_414679.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37017" + ], + [ + "gene_synonym", + "b0137" + ], + [ + "gene_synonym", + "yadL" + ] + ], + "dna_sequence": "ATGATGACATTTAAAAATTTACGTTATGGATTATCCAGCAGTGTCGTTTTGGCTGCCTCATTGTTCAGCGTACTCTCTTATGCGGCAACAGACAGTATTGGACTGACCGTTATTACTACTGTAGAAATGGGTACTTGTACCGCTACATTAGTAAATGACTCTGATCAGGACATTTCTGTTGTTGATTTTGGTGATGTATATATTTCTGAAATCAATGCCAAGACCAAAGTAAAAACATTCAAACTCAAATTCAAAGACTGTGCGGGTATCCCCAATAAAAAAGCGCAAATAAAATTAACCAAGCGAGCCACATGCGAGGGAACTGCTAATGACGGTGCGGGGTTTGCAAATGGTTCCACAGCCGCAGATAAAGCAAGTGCTGTCGCCGTTGAAGTCTGGAGCACTGTAACTCCGGCAACAGGGAGTGCAACACAATTTAGCTGTGTAACACCAGCATCACAAGAGGTAACAATCTCCACTGCAGCCAATGCGGTCGTTTATTATCCGATGAGTGCACGCCTGGTCGTGGAAAAAAATAAAACCGTAAACAATGTCACTGCGGGTAAGTTTTCTGCACCAGCCACATTTACAGTAACCTATAACTAA", + "dna_sequence_length": 606, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_133", + "location": [ + [ + "NC_000913", + 152231, + "-", + 606 + ] + ], + "md5": "8e81413249537fd794fc79741b13b331", + "parent_gene": "", + "protein_md5": "d89ccbae5a46f65a7becc1673e87de90", + "protein_translation": "MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000477" + ], + [ + "gene_synonym", + "ECK0137" + ], + [ + "gene_synonym", + "EcoGene:EG12327" + ], + [ + "gene_synonym", + "GI:90111089" + ], + [ + "gene_synonym", + "GeneID:944828" + ], + [ + "gene_synonym", + "JW0134" + ], + [ + "gene_synonym", + "NP_414680.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37018" + ], + [ + "gene_synonym", + "b0138" + ], + [ + "gene_synonym", + "yadM" + ] + ], + "dna_sequence": "ATGATAAAAACAACGCCACATAAAATAGTGATACTGATGGGAATATTATTATCACCCTCAGTATTTGCAACGGATATTAATGTAGAGTTTACAGCCACTGTCAAAGCGACAACCTGTAACATCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTCTGGATAAGATCGCGAATAAAACGACAGAATCTCAGGCTGATTTTAAACTGGTTGCCAGTGGGTGCAGCAGTGGCATCAGTTGGATTGATACCACTCTGACCGGAAATGCATCATCAAGCTCACCTAAGCTTATTATACCGCAGTCTGGTGATTCATCTTCGACGACAAGTAATATCGGTATGGGTTTCAAAAAACGGACTACTGATGATGCCACTTTCCTTAAACCTAACAGTGCGGAAAAGATACGCTGGAGCACAGACGAGATGCAGCCCGATAAGGGTCTTGAAATGACCGTTGCGCTACGTGAAACAGATGCAGGGCAAGGCGTACCGGGGAATTTTCGTGCACTGGCGACGTTTAATTTCATCTATCAATAA", + "dna_sequence_length": 570, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_134", + "location": [ + [ + "NC_000913", + 152812, + "-", + 570 + ] + ], + "md5": "cab5af42fa404036fa56d9e19dd6fe03", + "parent_gene": "", + "protein_md5": "7da70447456e55090456d8217c01f976", + "protein_translation": "MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALATFNFIYQ", + "protein_translation_length": 189, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000479" + ], + [ + "gene_synonym", + "ECK0138" + ], + [ + "gene_synonym", + "EcoGene:EG11972" + ], + [ + "gene_synonym", + "GI:16128132" + ], + [ + "gene_synonym", + "GeneID:944819" + ], + [ + "gene_synonym", + "JW0135" + ], + [ + "gene_synonym", + "NP_414681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33129" + ], + [ + "gene_synonym", + "b0139" + ], + [ + "gene_synonym", + "htrE" + ] + ], + "dna_sequence": "GTGACTATAGAATATACTAAAAATTATCATCATCTGACCCGTATCGCCACGTTTTGCGCGCTGCTGTATTGCAATACTGCTTTCAGTGCTGAACTCGTTGAATATGACCATACCTTCCTGATGGGGCAGAATGCATCTAATATTGATCTCAGCCGGTACAGTGAAGGTAACCCCGCTATACCGGGTGTTTACGACGTCAGTGTTTATGTAAACGACCAACCAATCATTAACCAAAGTATTACATTTGTCGCAATTGAAGGAAAAAAGAACGCCCAGGCTTGTATCACATTAAAGAATTTATTGCAGTTTCATATTAATTCTCCCGATATAAATAACGAAAAAGCCGTTCTGCTTGCCAGGGATGAAACGCTCGGCAATTGCCTCAATTTGACGGAAATTATCCCTCAGGCTTCTGTTCGTTATGACGTTAACGATCAACGTCTGGATATAGACGTTCCTCAAGCCTGGGTAATGAAAAATTACCAAAACTATGTTGATCCATCGTTATGGGAAAACGGCATTAATGCGGCCATGTTGTCATACAACCTCAACGGATATCATAGTGAAACCCCTGGTCGAAAAAATGAAAGCATTTATGCTGCATTTAACGGTGGGATGAATTTAGGTGCATGGCGACTGCGTGCCTCGGGCAACTACAACTGGATGACCGATTCTGGCAGTAATTATGATTTTAAGAATCGGTATGTTCAGCGTGATATCGCCTCGCTGCGTTCTCAACTCATTCTTGGTGAGTCTTATACGACGGGCGAAACCTTTGATTCCGTCAGTATCCGAGGCATTCGTTTATACAGTGACAGCCGCATGTTGCCTCCGACTTTAGCCAGCTTTGCGCCTATCATTCATGGCGTTGCCAATACCAACGCCAAAGTCACTATTACGCAAGGTGGCTATAAGATTTATGAAACGACGGTGCCGCCAGGCGCTTTCGTCATTGATGATCTGAGTCCGTCAGGGTACGGCAGCGATCTTATTGTTACCATCGAAGAATCCGATGGCTCAAAGCGGACATTCTCGCAACCTTTCTCATCCGTTGTTCAAATGTTACGCCCTGGCGTTGGACGTTGGGATATTAGCGGCGGTCAGGTCTTAAAAGATGATATTCAGGATGAGCCTAATTTATTTCAAGCAAGCTACTACTACGGCCTGAATAACTATCTGACGGGTTATACCGGTATTCAGATAACCGATAATAACTATACCGCTGGTTTGTTAGGTCTTGGTCTGAATACTTCAGTTGGTGCATTTTCTTTCGATGTGACTCATTCCAATGTTCGTATCCCGGATGATAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAATTGATGAAGTGAAACATCCCGAACAAGATCTTGAACCGAAATCCATGCGTAATTACTCACGCATGAAAAATCAGGTTACGGTCAGTATTAACCAACCGTTGAAATTTGAGAAAAAAGATTACGGTTCATTTTATCTTTCCGGAAGTTGGTCCGATTACTGGGCTTCCGGACAAAATCGTAGCAATTACTCTATTGGCTACAGTAACAGTACATCCTGGGGCAGCTACAGTGTCAGTGCCCAGCGTTCATGGAATGAAGACGGCGACACTGACGATAGCGTTTATCTTAGTTTCACCATTCCAATTGAAAAATTACTTGGCACTGAACAACGTACTTCAGGTTTCCAGAGTATTGATACTCAAATAAGCAGTGACTTTAAGGGTAATAACCAACTCAACGTTAGCAGCAGTGGCTATAGCGATAACGCTCGCGTCAGTTATAGCGTGAATACTGGCTATACGATGAATAAAGCCAGCAAAGATTTGAGTTATGTTGGGGGTTATGCCAGCTATGAGTCACCATGGGGAACGCTGGCAGGTTCAATTTCTGCAAATAGCGATAACAGCCGTCAAGTTTCTCTCAGCACCGACGGTGGTTTTGTATTGCATAGCGGTGGACTGACTTTCAGTAATGATAGTTTTAGCGACTCCGATACACTGGCGGTAGTTCAGGCTCCAGGTGCTCAAGGAGCGCGAATAAATTATGGCAACAGTACTATCGATCGATGGGGTTATGGTGTCACCAGCGCTCTTTCTCCTTATCATGAAAACCGTATCGCGCTGGATATCAACGATCTTGAGAACGATGTTGAATTAAAAAGTACCAGTGCAGTAGCTGTACCGCGTCAGGGTTCAGTCGTCTTTGCTGATTTTGAAACCGTGCAAGGGCAATCAGCCATTATGAACATCACACGAAGTGATGGTAAAAATATTCCATTTGCTGCAGATATTTATGATGAGCAAGGCAATGTCATTGGTAATGTTGGACAGGGTGGACAAGCATTTGTTCGTGGTATTGAGCAGCAGGGAAATATCAGCATTAAATGGCTCGAACAAAGTAAACCCGTAAGTTGTCTTGCGCATTATCAACAAAGCCCAGAAGCAGAAAAAATAGCACAATCTATTATTCTGAATGGAATTCGGTGTCAGATTCAGTAA", + "dna_sequence_length": 2598, + "functions": [ + "putative outer membrane usher protein" + ], + "id": "CDS_135", + "location": [ + [ + "NC_000913", + 155426, + "-", + 2598 + ] + ], + "md5": "1a72a9de05d150f97f44a42606bb6196", + "parent_gene": "", + "protein_md5": "fc7345cfde518ea6c81c03af64274d80", + "protein_translation": "MTIEYTKNYHHLTRIATFCALLYCNTAFSAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFVAIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNDQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKNESIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTIEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEKIAQSIILNGIRCQIQ", + "protein_translation_length": 865, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000482" + ], + [ + "gene_synonym", + "ECK0139" + ], + [ + "gene_synonym", + "EcoGene:EG11973" + ], + [ + "gene_synonym", + "GI:16128133" + ], + [ + "gene_synonym", + "GeneID:944859" + ], + [ + "gene_synonym", + "JW0136" + ], + [ + "gene_synonym", + "NP_414682.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33128" + ], + [ + "gene_synonym", + "b0140" + ], + [ + "gene_synonym", + "ecpD" + ], + [ + "gene_synonym", + "yadV" + ] + ], + "dna_sequence": "ATGTTTTTTAACACCAAACATACAACAGCTTTATGCTTCGTAACCTGTATGGCTTTTAGTTCATCGTCTATTGCGGACATTGTCATTTCGGGTACTCGCGTAATATATAAAAGCGATCAAAAAAGTGTCAACGTACGTCTGGAAAATAAAGGGAATAACCCGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCTACGCCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGCACCTCACTGCCTAAAGACAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGATGCAGAAAAGGTCGCGAATCAAAGCCTGCTGCAACTGGCATTTCGCACACGTATAAAACTTTTCTATCGCCCGGATGGATTGAAGGGAAATCCCTCTGAAGCCCCGTTAGCCCTGAAGTGGTTCTGGTCAGGTTCAGAAGGTAAGGCGTCATTACGAGTGACCAATCCAACCCCTTACTACGTCTCTTTTAGCAGTGGTGATTTAGAAGCTAGCGGTAAACGCTATCCGATTGATGTGAAAATGATTGCACCATTTAGTGATGAGGTCATGAAAGTCAATGGCCTTAATGGCAAAGCGAATTCTGCAAAAGTGCATTTTTACGCCATTAATGACTTTGGTGGCGCAATTGAAGGTAATGCCAGGCTGTAA", + "dna_sequence_length": 741, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_136", + "location": [ + [ + "NC_000913", + 156201, + "-", + 741 + ] + ], + "md5": "8c3c4a51da6298fccc9675d78f6ac4e8", + "parent_gene": "", + "protein_md5": "5881a3619c4db00cb1dc8cc73d574f4e", + "protein_translation": "MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000487" + ], + [ + "gene_synonym", + "ECK0140" + ], + [ + "gene_synonym", + "EcoGene:EG12328" + ], + [ + "gene_synonym", + "GI:16128134" + ], + [ + "gene_synonym", + "GeneID:944841" + ], + [ + "gene_synonym", + "JW0137" + ], + [ + "gene_synonym", + "NP_414683.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37050" + ], + [ + "gene_synonym", + "b0141" + ], + [ + "gene_synonym", + "yadN" + ] + ], + "dna_sequence": "ATGTCTAAAAAATTAGGTTTTGCCCTGTCTGGTCTTATGCTGGCGATGGTTGCAGGTACTGCTTCTGCTGATATGGACGGCGGTCAGTTAAATATCAGTGGTCTGGTTGTTGATAACACCTGTGAAACCCGCGTTGACGGCGGTAACAAGGATGGTCTGATCCTGCTGCAAACCGCAACCGTTGGTGAAATCGATGCTGGCGTACTGAATGACACCGTTGGCGCTAAAGCTAAACCTTTCAGCATCACCGTTGACTGCAGCAAAGCAAATCCGAATCCAGGTAGCACGGCTAAAATGACCTTCGGTTCTGTTTTCTTTGGTAACAGCAAAGGGACTTTGAACAACGACATGTCTATTAACAACCCATCTGACGGCGTTAATATCGCTCTACACAATATTGATGGTTCCACTATCAAACAGGTTCAAATTAACAACCCTGGCGATGTGTATACTAAAGCCCTGGATGCAACGACAAAATCTGCTGTTTATGATTTTAAAGCGTCTTACGTTCGTGCCGTCGCAGACCAAACAGCAACTGCTGGTTATGTAAAAACTAACACTGCATACACCATTACTTATCAGTAA", + "dna_sequence_length": 585, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_137", + "location": [ + [ + "NC_000913", + 156883, + "-", + 585 + ] + ], + "md5": "21e1ce12125b0f18376eeeae0c5bf90c", + "parent_gene": "", + "protein_md5": "c3ed61e86ca762340fa0f1438321b49a", + "protein_translation": "MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000491" + ], + [ + "gene_synonym", + "ECK0141" + ], + [ + "gene_synonym", + "EcoGene:EG11374" + ], + [ + "gene_synonym", + "GI:16128135" + ], + [ + "gene_synonym", + "GeneID:948792" + ], + [ + "gene_synonym", + "JW0138" + ], + [ + "gene_synonym", + "NP_414684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26281" + ], + [ + "gene_synonym", + "b0142" + ], + [ + "gene_synonym", + "folK" + ] + ], + "dna_sequence": "ATGACAGTGGCGTATATTGCCATAGGCAGCAATCTGGCCTCTCCGCTGGAGCAGGTCAATGCTGCCCTGAAAGCATTAGGCGATATCCCTGAAAGCCACATTCTTACCGTTTCTTCGTTTTACCGCACCCCACCGCTGGGGCCGCAAGATCAACCCGATTACTTAAACGCAGCCGTGGCGCTGGAAACCTCTCTTGCACCTGAAGAGCTACTCAATCACACACAGCGTATTGAATTGCAGCAAGGTCGCGTCCGCAAAGCTGAACGCTGGGGACCACGCACGCTGGATCTCGACATCATGCTGTTTGGTAATGAAGTGATAAATACTGAACGCCTGACCGTTCCGCACTACGATATGAAGAATCGTGGATTTATGCTGTGGCCGCTGTTTGAAATCGCGCCGGAGTTGGTGTTTCCTGATGGGGAGATGTTGCGTCAAATCTTACATACAAGAGCATTTGACAAATTAAACAAATGGTAA", + "dna_sequence_length": 480, + "functions": [ + "2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase" + ], + "id": "CDS_138", + "location": [ + [ + "NC_000913", + 157732, + "-", + 480 + ] + ], + "md5": "ea9ab2a4f32ae9bee4a6d0851a91f5ac", + "parent_gene": "", + "protein_md5": "8ec3f596357e83c64d4a301a0a64841c", + "protein_translation": "MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000493" + ], + [ + "gene_synonym", + "ECK0142" + ], + [ + "gene_synonym", + "EcoGene:EG10690" + ], + [ + "gene_synonym", + "GI:162135892" + ], + [ + "gene_synonym", + "GeneID:947318" + ], + [ + "gene_synonym", + "JW5808" + ], + [ + "gene_synonym", + "NP_414685.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABF1" + ], + [ + "gene_synonym", + "b0143" + ], + [ + "gene_synonym", + "pcnB" + ] + ], + "dna_sequence": "ATTTTTACCCGAGTCGCTAATTTTTGCCGCAAGGTGCTAAGCCGCGAGGAAAGCGAGGCTGAACAGGCAGTCGCCCGTCCACAGGTGACGGTGATCCCGCGTGAGCAGCATGCTATTTCCCGCAAAGATATCAGTGAAAATGCCCTGAAGGTAATGTACAGGCTCAATAAAGCGGGATACGAAGCCTGGCTGGTTGGCGGCGGCGTGCGCGACCTGTTACTTGGCAAAAAGCCGAAAGATTTTGACGTAACCACTAACGCCACGCCTGAGCAGGTGCGCAAACTGTTCCGTAACTGCCGCCTGGTGGGTCGCCGTTTCCGTCTGGCTCATGTAATGTTTGGCCCGGAGATTATCGAAGTTGCGACCTTCCGTGGACACCACGAAGGTAACGTCAGCGACCGCACGACCTCCCAACGCGGGCAAAACGGCATGTTGCTGCGCGACAACATTTTCGGCTCCATCGAAGAAGACGCCCAGCGCCGCGATTTCACTATCAACAGCCTGTATTACAGCGTAGCGGATTTTACCGTCCGTGATTACGTTGGCGGCATGAAGGATCTGAAGGACGGCGTTATCCGTCTGATTGGTAACCCGGAAACGCGCTACCGTGAAGATCCGGTACGTATGCTGCGCGCGGTACGTTTTGCCGCCAAATTGGGTATGCGCATCAGCCCGGAAACCGCAGAACCGATCCCTCGCCTCGCTACCCTGCTGAACGATATCCCACCGGCACGCCTGTTTGAAGAATCGCTTAAACTGCTACAAGCGGGCTACGGTTACGAAACCTATAAGCTGTTGTGTGAATATCATCTGTTCCAGCCGCTGTTCCCGACCATTACCCGCTACTTCACGGAAAATGGCGACAGCCCGATGGAGCGGATCATTGAACAGGTGCTGAAGAATACCGATACGCGTATCCATAACGATATGCGCGTGAACCCGGCGTTCCTGTTTGCCGCCATGTTCTGGTACCCACTGCTGGAGACGGCACAGAAGATCGCCCAGGAAAGCGGCCTGACCTATCACGACGCTTTCGCGCTGGCGATGAACGACGTGCTGGACGAAGCCTGCCGTTCACTGGCAATCCCGAAACGTCTGACGACATTAACCCGCGATATCTGGCAGTTGCAGTTGCGTATGTCCCGTCGTCAGGGTAAACGCGCATGGAAACTGCTGGAGCATCCTAAGTTCCGTGCGGCTTATGACCTGTTGGCCTTGCGAGCTGAAGTTGAGCGTAACGCTGAACTGCAGCGTCTGGTGAAATGGTGGGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCGTCGTACTCGTCGTCCACGCAAACGCGCACCACGTCGTGAGGGTACCGCATGA", + "dna_sequence_length": 1398, + "functions": [ + "poly(A) polymerase" + ], + "id": "CDS_139", + "location": [ + [ + "NC_000913", + 159126, + "-", + 1398 + ] + ], + "md5": "3e4b52ef6fe3db0e0dec189c5b19ba6d", + "parent_gene": "", + "protein_md5": "0477f57d4c0cbf394911f90808369024", + "protein_translation": "MFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000497" + ], + [ + "gene_synonym", + "ECK0143" + ], + [ + "gene_synonym", + "EcoGene:EG11362" + ], + [ + "gene_synonym", + "GI:226524698" + ], + [ + "gene_synonym", + "GeneID:944846" + ], + [ + "gene_synonym", + "JW5892" + ], + [ + "gene_synonym", + "NP_414686.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27305" + ], + [ + "gene_synonym", + "b0144" + ], + [ + "gene_synonym", + "gluQ" + ], + [ + "gene_synonym", + "yadB" + ] + ], + "dna_sequence": "ATGCTCCCGCCTTATTTTTTGTTCAAAGAGATGACAGACACACAGTATATTGGCCGCTTCGCCCCCTCTCCTTCCGGCGAGCTTCATTTTGGCTCTCTGATCGCCGCGCTCGGCAGCTATTTGCAGGCTCGCGCCCGGCAAGGTCGCTGGCTGGTACGCATAGAAGATATCGACCCGCCTCGTGAAGTTCCCGGTGCCGCAGAAACTATCCTGCGCCAGCTGGAACATTACGGTCTGCACTGGGACGGCGATGTTCTCTGGCAATCGCAACGTCACGACGCCTATCGTGAAGCACTCGCCTGGTTACATGAACAAGGACTAAGTTATTACTGCACCTGTACGCGTGCGCGTATTCAAAGCATTGGCGGTATTTACGACGGTCATTGCCGGGTGTTGCATCATGGACCAGACAACGCCGCAGTGCGTATCCGCCAGCAGCATCCGGTCACGCAATTTACTGACCAGCTGCGCGGCATTATTCACGCCGACGAAAAACTGGCACGGGAAGATTTTATCATTCATCGCCGTGATGGGTTGTTCGCCTACAACCTGGCTGTTGTGGTTGATGATCATTTCCAGGGCGTTACAGAAATAGTGCGTGGGGCTGATCTGATTGAACCAACAGTAAGGCAAATCTCGCTGTACCAGCTTTTTGGCTGGAAAGTGCCAGATTACATTCATCTGCCGCTGGCGCTTAATCCACAAGGCGCTAAACTTTCCAAGCAGAATCATGCGCCTGCGTTGCCGAAAGGCGATCCACGCCCGGTACTAATCGCGGCACTTCAATTTCTGGGGCAGCAGGCAGAAGCACACTGGCAGGATTTCAGCGTCGAGCAAATCCTTCAGTCAGCCGTCAAAAACTGGCGGCTTACCGCCGTGCCCGAGTCGGCAATTGTAAATTCAACATTCTCAAATGCGTCATGCTGA", + "dna_sequence_length": 927, + "functions": [ + "glutamyl-Q tRNA(Asp) synthetase" + ], + "id": "CDS_140", + "location": [ + [ + "NC_000913", + 160112, + "-", + 927 + ] + ], + "md5": "435e621632ef9d5c799f464707d8726e", + "parent_gene": "", + "protein_md5": "e2be1e8b3e2c71bf2a14409c735e713d", + "protein_translation": "MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPESAIVNSTFSNASC", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000499" + ], + [ + "gene_synonym", + "ECK0144" + ], + [ + "gene_synonym", + "EcoGene:EG10230" + ], + [ + "gene_synonym", + "GI:16128138" + ], + [ + "gene_synonym", + "GeneID:944850" + ], + [ + "gene_synonym", + "JW0141" + ], + [ + "gene_synonym", + "NP_414687.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABS1" + ], + [ + "gene_synonym", + "b0145" + ], + [ + "gene_synonym", + "dksA" + ], + [ + "gene_synonym", + "msmA" + ] + ], + "dna_sequence": "ATGCAAGAAGGGCAAAACCGTAAAACATCGTCCCTGAGTATTCTCGCCATCGCTGGGGTGGAACCATATCAGGAGAAGCCGGGCGAAGAGTATATGAATGAAGCCCAGCTGGCGCACTTCCGTCGTATTCTGGAAGCATGGCGTAATCAACTCAGGGATGAAGTCGATCGCACCGTTACACATATGCAGGATGAAGCAGCCAACTTCCCGGACCCGGTAGACCGTGCAGCCCAGGAAGAAGAGTTCAGCCTCGAACTGCGTAACCGCGATCGCGAGCGTAAGCTGATCAAAAAGATCGAGAAGACGCTGAAAAAAGTGGAAGACGAAGATTTCGGCTACTGCGAATCCTGCGGTGTTGAAATTGGTATTCGCCGTCTGGAAGCGCGCCCGACAGCCGATCTGTGCATCGACTGCAAAACGCTGGCTGAAATTCGCGAAAAACAGATGGCTGGCTAA", + "dna_sequence_length": 456, + "functions": [ + "transcriptional regulator of rRNA transcription", + "DnaK suppressor protein" + ], + "id": "CDS_141", + "location": [ + [ + "NC_000913", + 160604, + "-", + 456 + ] + ], + "md5": "58fa0e1837a66891a66ff1953cf79486", + "parent_gene": "", + "protein_md5": "5492ee991adc2f4a849470a45e6b2141", + "protein_translation": "MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000503" + ], + [ + "gene_synonym", + "ECK0145" + ], + [ + "gene_synonym", + "EcoGene:EG10949" + ], + [ + "gene_synonym", + "GI:16128139" + ], + [ + "gene_synonym", + "GeneID:944855" + ], + [ + "gene_synonym", + "JW0142" + ], + [ + "gene_synonym", + "NP_414688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A823" + ], + [ + "gene_synonym", + "b0146" + ], + [ + "gene_synonym", + "sfs" + ], + [ + "gene_synonym", + "sfs1" + ], + [ + "gene_synonym", + "sfsA" + ] + ], + "dna_sequence": "ATGGAATTTTCTCCCCCTCTACAGCGCGCGACGCTAATTCAGCGTTACAAACGTTTTTTAGCCGATGTGATCACACCCGATGGTCGCGAATTAACGCTACACTGCCCGAATACGGGTGCGATGACCGGTTGTGCAACGCCTGGCGATACCGTCTGGTATTCGACTTCAGACAACACCAAACGGAAATACCCACACACCTGGGAATTAACTCAAAGCCAGAGCGGCGCATTTATTTGCGTCAACACGCTTTGGGCTAACAGGTTGACGAAAGAGGCTATCCTTAATGAATCAATTTCAGAACTGTCAGGCTATAGCTCGCTGAAAAGCGAAGTAAAATACGGCGCAGAACGCAGCCGTATTGACTTTATGTTGCAGGCGGATTCGCGTCCAGACTGCTATATTGAAGTGAAATCGGTTACGTTAGCGGAGAACGAACAGGGATATTTTCCCGATGCGGTCACTGAACGAGGTCAGAAACACCTTCGGGAGTTGATGAGCGTAGCGGCTGAAGGCCAGCGTGCGGTTATCTTTTTCGCCGTGCTGCATTCAGCCATTACACGGTTTTCACCCGCGCGCCACATCGATGAGAAATACGCGCAACTATTGTCAGAAGCTCAACAGAGGGGGGTAGAAATTCTGGCTTACAAAGCGGAAATTTCTGCTGAAGGCATGGCTCTTAAAAAATCACTGCCGGTTACATTGTAG", + "dna_sequence_length": 705, + "functions": [ + "sugar fermentation stimulation protein A" + ], + "id": "CDS_142", + "location": [ + [ + "NC_000913", + 161486, + "-", + 705 + ] + ], + "md5": "8e53e78e69f244d72289588dc29ba4e3", + "parent_gene": "", + "protein_md5": "52f8d87678b685eb9a2b7791673843d9", + "protein_translation": "MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000505" + ], + [ + "gene_synonym", + "ECK0146" + ], + [ + "gene_synonym", + "EcoGene:EG12330" + ], + [ + "gene_synonym", + "GI:90111091" + ], + [ + "gene_synonym", + "GeneID:944848" + ], + [ + "gene_synonym", + "JW5011" + ], + [ + "gene_synonym", + "NP_414689.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37025" + ], + [ + "gene_synonym", + "b0147" + ], + [ + "gene_synonym", + "ligT" + ], + [ + "gene_synonym", + "yadP" + ] + ], + "dna_sequence": "ATGTCTGAACCGCAACGTCTGTTCTTTGCTATCGACTTACCTGCAGAAATCCGCGAACAGATTATCCATTGGCGCGCCACACACTTCCCACCTGAGGCGGGACGTCCGGTCGCCGCCGATAATTTGCATCTGACTCTGGCATTTTTAGGCGAAGTGAGCGCCGAGAAAGAGAAGGCGCTTTCTCTTTTAGCCGGACGGATTCGTCAACCTGGTTTCACACTCACGCTTGATGACGCCGGACAATGGCTGCGTTCGCGTGTGGTGTGGTTAGGGATGCGTCAGCCGCCACGCGGCTTAATCCAGCTGGCGAATATGCTCCGTTCACAGGCTGCCCGCAGCGGTTGTTTTCAAAGCAATCGTCCGTTTCATCCACATATTACCTTATTGCGCGACGCCAGCGAGGCGGTGACAATCCCGCCGCCAGGTTTTAACTGGTCGTATGCGGTGACGGAGTTCACCCTTTACGCCTCCTCGTTTGCCCGTGGACGCACACGCTACACGCCGCTAAAACGCTGGGCGCTAACGCAATAA", + "dna_sequence_length": 531, + "functions": [ + "2'-5' RNA ligase" + ], + "id": "CDS_143", + "location": [ + [ + "NC_000913", + 162031, + "-", + 531 + ] + ], + "md5": "752a20b2ed6866eb3376ce489f5383a2", + "parent_gene": "", + "protein_md5": "e6f459b6a57cdee20fb777041dabb654", + "protein_translation": "MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000510" + ], + [ + "gene_synonym", + "ECK0147" + ], + [ + "gene_synonym", + "EcoGene:EG12329" + ], + [ + "gene_synonym", + "GI:162135893" + ], + [ + "gene_synonym", + "GeneID:944845" + ], + [ + "gene_synonym", + "JW0144" + ], + [ + "gene_synonym", + "NP_414690.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37024" + ], + [ + "gene_synonym", + "b0148" + ], + [ + "gene_synonym", + "hrpB" + ], + [ + "gene_synonym", + "yadO" + ] + ], + "dna_sequence": "GTGTCGTCGTTGCCCGTTGCTGCCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTCGTCATCTCAGAAGGGCGCTCGTTTCCGGTTGAACGCCGTTATTTACCGCTGCCCGCGCATCAGCGTTTTGACGATGCCGTTGCGGTAGCCACCGCTGAAATGCTGCGTCAGGAAAGCGGATCATTACTGTTATTTTTACCTGGCGTCGGAGAAATTCAGCGTGTGCAGGAACAACTGGCTTCGCGCATCGGCAGTGATGTATTGCTCTGCCCGCTGTATGGCGCGTTGTCGCTGAACGATCAGCGAAAAGCGATCCTCCCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCGGGCGCGCCGGGCGTCTGGAGCCGGGTATCAGCCTGCATTTAATCGCCAAAGAACAAGCAGAACGCGCCGCGGCGCAAAGTGAACCGGAGATCTTACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCGCTTATCGCGCCGCTACTTGCCGGGGCGTTTGCCGATCGCATTGCTCGTCGCCGTGGGCAAGATGGACGCTATCAACTGGCAAACGGCATGGGAGCGATGCTCGATGCCAACGACGCGCTAAGCCGCCACGAATGGTTGATCGCACCGTTATTATTGCAGGGCAGCGCCTCGCCGGATGCGCGGATTTTACTGGCGCTGCTGGTCGATATTGATGAGTTAGTACAACGCTGCCCGCAGCTGGTACAGCAGTCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTGGACGGCGGAAGCGGAACAGCTACGCTTGCGTTTGTTATGCGCCGCAAAGTGGTTGCCGGAATATGACTGGCCAGCGGTTGATGATGAAAGTTTATTGGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGCCCAGGGGCGCGTGCCGCTGGTGCTGGAGTTGCTTTCACCTGCCCAAAGGCCATTACAAATCACACGAGATTTGAGCGACTTCTGGAAAGGAGCGTACCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAA", + "dna_sequence_length": 2430, + "functions": [ + "putative ATP-dependent helicase" + ], + "id": "CDS_144", + "location": [ + [ + "NC_000913", + 162105, + "+", + 2430 + ] + ], + "md5": "d3b5876d1cd54cfe3a0848481ed124f6", + "parent_gene": "", + "protein_md5": "8f8db7ee930adc1f95897e626122641e", + "protein_translation": "MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQITRDLSDFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS", + "protein_translation_length": 809, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000516" + ], + [ + "gene_synonym", + "ECK0148" + ], + [ + "gene_synonym", + "EcoGene:EG10605" + ], + [ + "gene_synonym", + "GI:16128142" + ], + [ + "gene_synonym", + "GeneID:944843" + ], + [ + "gene_synonym", + "JW0145" + ], + [ + "gene_synonym", + "NP_414691.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02919" + ], + [ + "gene_synonym", + "b0149" + ], + [ + "gene_synonym", + "mrcB" + ], + [ + "gene_synonym", + "pbpF" + ], + [ + "gene_synonym", + "ponB" + ] + ], + "dna_sequence": "ATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAACAAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGATTATGATGACTATGAGGATGAAGAACCGATGCCGCGCAAAGGTAAGGGCAAAGGCAAAGGGCGTAAGCCTCGTGGCAAACGCGGCTGGCTATGGCTACTGCTAAAACTGGCTATCGTTTTTGCCGTGCTGATCGCCATTTACGGCGTTTATCTCGATCAAAAAATTCGTAGCCGTATTGATGGCAAGGTCTGGCAACTGCCTGCGGCAGTTTATGGCCGAATGGTCAATCTTGAGCCAGACATGACCATCAGCAAGAACGAGATGGTGAAGCTGCTGGAGGCGACCCAGTATCGTCAGGTGTCGAAAATGACCCGTCCTGGCGAATTTACCGTGCAGGCCAACAGCATTGAGATGATTCGCCGTCCGTTTGATTTCCCGGACAGTAAAGAAGGACAGGTGCGCGCGCGTCTGACCTTTGATGGCGATCATCTGGCGACGATCGTCAATATGGAGAACAACCGTCAGTTCGGTTTCTTCCGTCTTGATCCGCGTCTGATCACCATGATCTCTTCGCCAAACGGTGAGCAGCGTCTGTTTGTGCCGCGCAGTGGTTTCCCGGATTTGCTGGTGGATACTTTGCTGGCGACAGAAGACCGTCATTTTTACGAGCATGATGGAATCAGTCTCTACTCAATCGGACGTGCGGTGCTGGCAAACCTGACCGCCGGACGCACGGTACAGGGTGCGAGTACGCTGACGCAACAGCTGGTGAAAAACCTGTTCCTCTCCAGCGAGCGTTCTTACTGGCGTAAAGCGAACGAAGCTTACATGGCGCTGATCATGGACGCGCGTTACAGCAAAGACCGTATTCTTGAGCTGTATATGAACGAGGTGTATCTCGGTCAGAGCGGCGACAACGAAATCCGCGGCTTCCCGCTGGCAAGCTTGTATTACTTTGGTCGCCCGGTAGAAGAGCTAAGCCTCGACCAGCAGGCGCTGTTAGTCGGTATGGTGAAAGGGGCGTCCATCTACAACCCGTGGCGTAACCCAAAACTGGCGCTGGAGCGACGTAATCTGGTGCTGCGTCTGCTGCAACAGCAACAGATTATTGATCAAGAACTCTATGACATGTTGAGTGCCCGTCCGCTGGGGGTTCAGCCGCGCGGTGGGGTGATCTCTCCTCAGCCAGCCTTTATGCAACTGGTGCGTCAGGAGCTGCAGGCAAAACTGGGCGATAAGGTAAAAGATCTCTCCGGCGTGAAGATCTTCACTACCTTTGACTCGGTGGCCCAGGACGCGGCAGAAAAAGCCGCCGTGGAAGGCATTCCGGCACTGAAGAAACAGCGTAAGTTGAGCGATCTTGAAACTGCGATTGTGGTCGTCGACCGCTTTAGTGGTGAAGTTCGTGCGATGGTCGGAGGTTCTGAGCCGCAGTTTGCGGGCTACAACCGTGCGATGCAGGCGCGTCGTTCGATTGGTTCCCTTGCAAAACCAGCGACTTATCTGACGGCCTTAAGCCAGCCGAAAATCTATCGTCTGAATACGTGGATTGCGGATGCGCCAATTGCGCTGCGTCAGCCGAATGGCCAGGTCTGGTCACCGCAGAATGATGACCGTCGTTATAGCGAAAGCGGCAGAGTGATGCTGGTGGATGCGTTGACCCGTTCGATGAACGTGCCGACGGTAAATCTGGGGATGGCGCTGGGGCTGCCTGCGGTTACGGAGACCTGGATTAAACTGGGCGTACCGAAAGATCAGTTGCATCCGGTTCCGGCAATGCTGCTGGGGGCGTTGAACTTAACGCCAATCGAAGTGGCGCAGGCATTCCAGACCATCGCCAGCGGTGGTAACCGTGCACCGCTTTCTGCGCTGCGTTCGGTAATCGCGGAAGATGGCAAAGTGCTGTATCAGAGCTTCCCGCAGGCGGAACGCGCTGTTCCGGCGCAGGCGGCGTATCTGACACTATGGACCATGCAGCAGGTGGTACAACGCGGTACGGGTCGTCAGCTTGGGGCGAAATACCCGAACCTGCATCTGGCAGGGAAAACAGGGACTACCAACAATAACGTAGATACCTGGTTTGCGGGCATTGACGGCAGCACGGTGACCATCACCTGGGTCGGCCGTGATAACAACCAGCCGACCAAACTGTATGGTGCCAGCGGGGCAATGTCGATTTATCAGCGTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAA", + "dna_sequence_length": 2535, + "functions": [ + "fused glycosyl transferase and transpeptidase" + ], + "id": "CDS_145", + "location": [ + [ + "NC_000913", + 164730, + "+", + 2535 + ] + ], + "md5": "ff2d35bb16a32c1082f6bd2eda57a1c1", + "parent_gene": "", + "protein_md5": "254d97f5d497ed17e650772214fa6811", + "protein_translation": "MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN", + "protein_translation_length": 844, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000520" + ], + [ + "gene_synonym", + "ECK0149" + ], + [ + "gene_synonym", + "EcoGene:EG10302" + ], + [ + "gene_synonym", + "GI:16128143" + ], + [ + "gene_synonym", + "GeneID:944856" + ], + [ + "gene_synonym", + "JW0146" + ], + [ + "gene_synonym", + "NP_414692.1" + ], + [ + "gene_synonym", + "T1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06971" + ], + [ + "gene_synonym", + "b0150" + ], + [ + "gene_synonym", + "fhuA" + ], + [ + "gene_synonym", + "tonA" + ] + ], + "dna_sequence": "ATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCGCAGTTGTAGTAGCCACAGCGGTTAGCGGCATGTCTGTTTATGCACAGGCAGCGGTTGAACCGAAAGAAGACACTATCACCGTTACCGCTGCACCTGCGCCGCAAGAAAGCGCATGGGGGCCTGCTGCAACTATTGCGGCGCGACAGTCTGCTACCGGCACTAAAACCGATACGCCGATTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTGGCCCGGTTTCCGTGCTTTACGGTAAAAGCAGTCCTGGCGGCCTGTTGAATATGGTCAGCAAGCGTCCGACCACCGAACCGCTGAAAGAAGTTCAGTTTAAAGCCGGTACTGACAGCCTGTTCCAGACTGGTTTTGACTTTAGCGATTCGTTGGATGATGACGGTGTTTACTCTTATCGCCTGACCGGTCTTGCGCGTTCTGCCAATGCCCAGCAGAAAGGGTCAGAAGAGCAGCGTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATCTGTACAATCCGGTGAATACCGATTTCGACTTCAATGCCAAAGATCCGGCAAACTCCGGCCCTTACCGCATTCTGAATAAACAGAAACAAACGGGCGTTTATGTTCAGGATCAGGCGCAGTGGGATAAAGTGCTGGTCACCCTAGGCGGTCGTTATGACTGGGCAGATCAAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTAACTACCTGTTTGATAATGGTGTAACACCTTACTTCAGCTATAGCGAATCGTTTGAACCTTCTTCGCAAGTTGGGAAGGATGGTAATATTTTCGCACCGTCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCTGACGCTGGGCACCGGTGGTCGTTATACTGGCTCCAGTTATGGTGATCCGGCTAACTCCTTTAAAGTGGGAAGTTATACGGTCGTGGATGCGTTAGTACGTTATGATCTGGCGCGAGTCGGCATGGCTGGCTCCAACGTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAA", + "dna_sequence_length": 2244, + "functions": [ + "ferrichrome outer membrane transporter" + ], + "id": "CDS_146", + "location": [ + [ + "NC_000913", + 167484, + "+", + 2244 + ] + ], + "md5": "467a47984b81f22142b6169a40ede9c2", + "parent_gene": "", + "protein_md5": "21a88c481c4dec223b53369a71d600f2", + "protein_translation": "MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF", + "protein_translation_length": 747, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000522" + ], + [ + "gene_synonym", + "ECK0150" + ], + [ + "gene_synonym", + "EcoGene:EG10304" + ], + [ + "gene_synonym", + "GI:16128144" + ], + [ + "gene_synonym", + "GeneID:945250" + ], + [ + "gene_synonym", + "JW0147" + ], + [ + "gene_synonym", + "NP_414693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07821" + ], + [ + "gene_synonym", + "b0151" + ], + [ + "gene_synonym", + "fhuC" + ] + ], + "dna_sequence": "ATGCAGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGACCGGTCTGATTGGTCACAACGGTTCTGGTAAATCCACTCTGCTCAAAATGCTTGGCCGTCATCAGCCGCCGTCGGAAGGGGAGATTCTTCTTGATGCCCAACCGCTGGAAAGCTGGAGCAGCAAAGCGTTTGCCCGCAAAGTGGCTTATTTGCCGCAGCAGCTTCCTCCGGCAGAAGGGATGACCGTGCGTGAACTGGTGGCGATTGGTCGTTACCCGTGGCATGGCGCGCTGGGGCGCTTTGGGGCGGCAGATCGCGAAAAAGTCGAGGAAGCTATCTCGCTGGTTGGCTTAAAACCGCTGGCGCATCGGCTGGTCGATAGTCTCTCTGGCGGCGAACGTCAGCGGGCGTGGATCGCCATGCTGGTGGCGCAGGATAGCCGTTGTCTGTTGCTCGACGAACCGACCTCGGCGCTGGATATCGCCCACCAGGTTGATGTGCTGTCGCTGGTGCACCGTTTAAGTCAGGAGCGTGGCCTGACGGTCATTGCCGTGTTGCACGATATCAATATGGCGGCACGCTACTGTGATTATCTGGTCGCCCTGCGCGGCGGTGAAATGATTGCTCAGGGAACGCCTGCGGAAATTATGCGCGGCGAAACCCTCGAAATGATTTATGGCATCCCGATGGGTATTTTGCCGCATCCGGCGGGTGCTGCACCTGTGAGTTTTGTTTATTGA", + "dna_sequence_length": 798, + "functions": [ + "iron(3+)-hydroxamate import ABC transporter ATPase" + ], + "id": "CDS_147", + "location": [ + [ + "NC_000913", + 169778, + "+", + 798 + ] + ], + "md5": "86c9fe9d81edf7fa7a0f1c36094a0b28", + "parent_gene": "", + "protein_md5": "84438753d7cba90f0b21ff4792580f03", + "protein_translation": "MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000524" + ], + [ + "gene_synonym", + "ECK0151" + ], + [ + "gene_synonym", + "EcoGene:EG10305" + ], + [ + "gene_synonym", + "GI:16128145" + ], + [ + "gene_synonym", + "GeneID:947510" + ], + [ + "gene_synonym", + "JW0148" + ], + [ + "gene_synonym", + "NP_414694.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07822" + ], + [ + "gene_synonym", + "b0152" + ], + [ + "gene_synonym", + "fhuD" + ] + ], + "dna_sequence": "ATGAGCGGCTTACCTCTTATTTCGCGCCGTCGACTGTTAACGGCGATGGCGCTTTCTCCGTTGTTATGGCAGATGAATACCGCCCACGCGGCGGCTATTGATCCCAATCGTATTGTGGCGCTGGAGTGGTTGCCGGTGGAATTACTGCTGGCGCTCGGCATCGTGCCTTACGGCGTGGCGGATACCATCAACTATCGCCTGTGGGTCAGCGAACCACCATTGCCGGACTCAGTGATCGACGTCGGTTTGCGCACAGAACCTAACCTTGAACTGCTGACCGAAATGAAACCATCGTTTATGGTCTGGTCGGCAGGATATGGCCCTTCACCAGAAATGCTGGCTCGTATTGCGCCGGGTCGCGGATTTAACTTCAGTGACGGCAAACAGCCGTTGGCGATGGCGCGTAAATCGCTGACGGAAATGGCAGATTTACTTAACCTGCAAAGCGCAGCGGAAACGCATTTAGCGCAATATGAAGACTTTATCCGCAGCATGAAACCCCGCTTTGTGAAGCGTGGTGCGCGTCCGTTATTGCTGACGACGCTTATCGATCCGCGCCATATGCTGGTCTTCGGTCCAAACAGCTTGTTCCAGGAAATTCTTGATGAGTACGGCATCCCAAATGCCTGGCAAGGGGAAACCAACTTCTGGGGCAGTACCGCCGTCAGTATCGATCGTCTGGCGGCGTATAAAGACGTTGATGTGCTCTGTTTTGATCACGACAACAGCAAAGACATGGATGCGCTAATGGCAACGCCGCTGTGGCAGGCCATGCCGTTTGTCCGCGCCGGACGCTTTCAGCGCGTACCTGCAGTCTGGTTTTATGGTGCGACGCTCTCGGCAATGCACTTTGTGCGCGTTCTGGATAACGCCATCGGAGGTAAAGCGTGA", + "dna_sequence_length": 891, + "functions": [ + "iron(3+)-hydroxamate import ABC transporter periplasmic binding protein" + ], + "id": "CDS_148", + "location": [ + [ + "NC_000913", + 170575, + "+", + 891 + ] + ], + "md5": "6127f8980ba16c80af58b458f6eab77f", + "parent_gene": "", + "protein_md5": "3dc6f035d807193f2faa8c058a64169a", + "protein_translation": "MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRVLDNAIGGKA", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000526" + ], + [ + "gene_synonym", + "ECK0152" + ], + [ + "gene_synonym", + "EcoGene:EG10303" + ], + [ + "gene_synonym", + "GI:16128146" + ], + [ + "gene_synonym", + "GeneID:946890" + ], + [ + "gene_synonym", + "JW0149" + ], + [ + "gene_synonym", + "NP_414695.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06972" + ], + [ + "gene_synonym", + "b0153" + ], + [ + "gene_synonym", + "fhuB" + ] + ], + "dna_sequence": "GTGAGTAAACGAATTGCGCTTTTCCCGGCGTTATTGCTGGCGCTGTTAGTGATTGTCGCTACGGCGCTCACCTGGATGAACTTCTCGCAGGCGCTGCCGCGTAGCCAGTGGGCGCAGGCTGCCTGGTCGCCGGATATTGACGTCATCGAGCAGATGATTTTTCACTACAGCTTGTTGCCGCGTCTGGCGATTTCGCTGCTGGTGGGCGCGGGTCTGGGGCTGGTGGGCGTGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCGCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTACTGGTTATCTTCCATCATGACCAACTGCAAAGCATGTTTCTGTGGAGCACTGGAACGCTGACGCAAACCGACTGGGGCGGCGTTGAGCGTTTATGGCCGCAGCTGCTGGGCGGTGTGATGCTGACGTTGCTGCTACTTCGTCCGTTAACCCTGATGGGGCTTGATGATGGCGTGGCGCGCAATCTCGGGCTGGCCTTGTCGCTTGCGCGTCTGGCAGCGCTGTCGCTGGCGATTGTCATCAGTGCGCTGCTGGTGAACGCTGTGGGGATTATCGGCTTTATCGGGTTGTTCGCGCCGCTGCTGGCAAAAATGCTGGGGGCGCGGCGTCTGCTGCCACGACTGATGCTGGCGTCGTTGATTGGTGCGCTGATCCTCTGGCTTTCCGATCAAATCATCCTCTGGCTGACTCGCGTGTGGATGGAAGTGTCCACCGGTTCGGTCACTGCGTTGATCGGTGCGCCGCTGCTACTGTGGCTGTTGCCGCGTTTACGCAGCATTAGCGCGCCGGATATGAAGGTCAACGATCGTGTCGCGGCTGAACGCCAACATGTGCTGGCGTTTGCCCTCGCGGGCGGCGTGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTGATGCGCACGGCTGGACGTGGGCGAGCGGGGCGTTGCTCGAGGATTTAATGCCCTGGCGCTGGCCGCGAATTATGGCGGCGCTGTTTGCGGGCGTCATGCTGGCGGTGGCGGGCTGTATTATTCAGCGACTGACCGGAAACCCGATGGCAAGCCCGGAAGTGCTGGGGATTAGCTCCGGCGCGGCGTTTGGCGTGGTGTTGATGCTGTTTCTGGTGCCGGGTAATGCCTTTGGCTGGCTGTTACCTGCAGGCAGTCTCGGCGCGGCGGTGACGCTGTTGATCATTATGATCGCCGCCGGCCGCGGTGGATTTTCCCCACACCGTATGTTACTGGCGGGGATGGCGTTAAGCACCGCGTTCACCATGCTTTTGATGATGTTGCAGGCAAGTGGTGACCCGCGAATGGCGCAAGTGCTGACCTGGATTTCCGGTTCGACCTACAACGCGACCGATGCGCAGGTCTGGCGCACCGGAATTGTGATGGTGATTTTGCTGGCGATTACCCCGCTGTGCCGCCGCTGGCTGACCATTTTACCGCTGGGTGGTGATACCGCCCGAGCCGTAGGAATGGCGCTGACGCCGACGCGAATTGCGCTGCTGCTGTTAGCGGCTTGCCTGACGGCGACCGCGACGATGACTATTGGACCGTTGAGTTTTGTTGGTTTAATGGCACCGCATATTGCGCGGATGATGGGCTTTCGACGGACGATGCCACACATCGTAATTTCGGCGCTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAA", + "dna_sequence_length": 1983, + "functions": [ + "iron(3+)-hydroxamate import ABC transporter permease" + ], + "id": "CDS_149", + "location": [ + [ + "NC_000913", + 171462, + "+", + 1983 + ] + ], + "md5": "5e4fdd67a72a4b3425bcd882df7839bb", + "parent_gene": "", + "protein_md5": "4fd99d79287b912ccee1d7f7d8b4a0c0", + "protein_translation": "MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFAAQAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR", + "protein_translation_length": 660, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000529" + ], + [ + "gene_synonym", + "ECK0153" + ], + [ + "gene_synonym", + "EcoGene:EG10432" + ], + [ + "gene_synonym", + "GI:16128147" + ], + [ + "gene_synonym", + "GeneID:946892" + ], + [ + "gene_synonym", + "JW0150" + ], + [ + "gene_synonym", + "NP_414696.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23893" + ], + [ + "gene_synonym", + "b0154" + ], + [ + "gene_synonym", + "gsa?" + ], + [ + "gene_synonym", + "hemL" + ], + [ + "gene_synonym", + "popC" + ] + ], + "dna_sequence": "ATGAGTAAGTCTGAAAATCTTTACAGCGCAGCGCGCGAGCTGATCCCTGGCGGTGTGAACTCCCCTGTTCGCGCCTTTACTGGCGTGGGCGGCACTCCACTGTTTATCGAAAAAGCGGACGGCGCTTATCTGTACGATGTTGATGGCAAAGCCTATATCGATTATGTCGGTTCCTGGGGGCCGATGGTGCTGGGCCATAACCATCCGGCAATCCGCAATGCCGTGATTGAAGCCGCCGAGCGTGGTTTAAGCTTTGGTGCACCAACCGAAATGGAAGTGAAAATGGCGCAACTGGTGACCGAACTGGTCCCGACCATGGATATGGTGCGCATGGTGAACTCCGGCACTGAAGCGACCATGAGCGCCATCCGCCTGGCCCGTGGTTTTACCGGTCGCGACAAAATTATTAAATTTGAAGGGTGTTACCATGGTCACGCTGACTGCCTGCTGGTGAAAGCCGGTTCTGGCGCACTCACGTTAGGCCAGCCAAACTCGCCGGGCGTTCCGGCAGATTTCGCCAAATATACCTTAACCTGTACTTATAATGATCTGGCTTCTGTACGCGCCGCATTTGAGCAATACCCGCAAGAGATTGCCTGTATTATCGTCGAGCCGGTGGCAGGCAATATGAACTGTGTTCCGCCGCTGCCAGAGTTCCTGCCAGGTCTGCGCGCGCTGTGCGACGAATTTGGCGCGTTGCTGATCATCGATGAAGTGATGACCGGTTTCCGCGTAGCGCTAGCTGGCGCACAGGATTATTACGGCGTAGTGCCAGATTTAACCTGCCTCGGCAAAATCATCGGCGGTGGAATGCCGGTAGGCGCATTCGGTGGTCGTCGTGATGTAATGGATGCGCTGGCCCCGACGGGTCCGGTCTATCAGGCGGGTACGCTTTCCGGTAACCCGATTGCGATGGCAGCGGGTTTCGCCTGTCTGAATGAAGTCGCGCAGCCGGGCGTTCACGAAACGCTGGATGAGCTGACAACACGTCTGGCAGAAGGTCTGCTGGAAGCGGCAGAAGAAGCCGGAATTCCGCTGGTCGTTAACCACGTTGGCGGCATGTTCGGTATTTTCTTTACCGACGCCGAGTCCGTGACGTGCTATCAGGATGTGATGGCCTGTGACGTGGAACGCTTTAAGCGTTTCTTCCATATGATGCTGGACGAAGGTGTTTACCTGGCACCGTCAGCGTTTGAAGCGGGCTTTATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTGCACGTCGGGTGTTTGCGAAGTTGTGA", + "dna_sequence_length": 1281, + "functions": [ + "glutamate-1-semialdehyde aminotransferase (aminomutase)" + ], + "id": "CDS_150", + "location": [ + [ + "NC_000913", + 174882, + "-", + 1281 + ] + ], + "md5": "4dd52cdb04dde0f811807638d65fe6ea", + "parent_gene": "", + "protein_md5": "c93a72a28bd021655bc2221b16efd538", + "protein_translation": "MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000533" + ], + [ + "gene_synonym", + "ECK0154" + ], + [ + "gene_synonym", + "EcoGene:EG12331" + ], + [ + "gene_synonym", + "GI:16128148" + ], + [ + "gene_synonym", + "GeneID:946715" + ], + [ + "gene_synonym", + "JW5012" + ], + [ + "gene_synonym", + "NP_414697.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37019" + ], + [ + "gene_synonym", + "b0155" + ], + [ + "gene_synonym", + "clcA" + ], + [ + "gene_synonym", + "eriC" + ], + [ + "gene_synonym", + "yadQ" + ] + ], + "dna_sequence": "ATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGCGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGAACCAACGTATGGGGGCGCTGGTACATACTGCTGATAATTATCCGCTTCTGTTAACCGTCGCTTTTCTCTGTTCGGCGGTGCTGGCGATGTTTGGCTACTTTTTGGTGCGCAAATACGCGCCGGAAGCAGGTGGTTCGGGGATCCCGGAAATTGAAGGGGCGCTGGAAGATCAACGTCCCGTTCGCTGGTGGCGTGTATTGCCGGTGAAGTTCTTTGGCGGGCTGGGGACACTCGGCGGAGGCATGGTGTTGGGGCGCGAAGGGCCAACCGTGCAGATCGGCGGTAACATTGGCCGTATGGTGCTTGATATTTTCCGCCTGAAAGGTGACGAAGCTCGCCATACGCTGCTGGCAACCGGTGCTGCTGCGGGGCTGGCTGCGGCCTTTAACGCGCCGCTGGCGGGTATTTTGTTTATTATCGAAGAGATGCGTCCGCAGTTTCGCTATACGTTAATTTCGATTAAAGCGGTATTTATTGGTGTCATTATGTCGACCATTATGTACCGGATTTTTAATCATGAAGTTGCGTTGATTGACGTCGGTAAACTTTCTGATGCGCCGCTTAATACGCTGTGGCTTTATCTGATCCTCGGTATTATTTTTGGCATTTTCGGCCCTATTTTTAATAAATGGGTGCTGGGGATGCAGGATTTGCTGCACCGTGTGCACGGCGGCAATATTACCAAATGGGTGCTAATGGGCGGTGCGATTGGCGGTCTGTGTGGATTGCTGGGGTTTGTGGCACCAGCAACGTCGGGCGGCGGTTTTAACCTGATTCCTATCGCTACCGCGGGGAATTTCAGCATGGGAATGCTGGTGTTTATCTTCGTCGCGCGGGTCATTACCACCTTACTCTGCTTCTCTTCCGGCGCGCCGGGCGGTATTTTTGCCCCGATGCTGGCGCTGGGTACTGTGCTGGGAACCGCTTTCGGAATGGTTGCCGTTGAGCTGTTTCCGCAATATCACCTTGAGGCGGGGACGTTTGCTATTGCCGGAATGGGGGCATTACTGGCGGCATCTATTCGCGCGCCGTTAACGGGGATCATTCTGGTTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATACTTGA", + "dna_sequence_length": 1422, + "functions": [ + "H(+)/Cl(-) exchange transporter" + ], + "id": "CDS_151", + "location": [ + [ + "NC_000913", + 175107, + "+", + 1422 + ] + ], + "md5": "0c1b238e192311e7b940cee6475a017b", + "parent_gene": "", + "protein_md5": "cc50097b245098fa32ff05d39746678f", + "protein_translation": "MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASASENT", + "protein_translation_length": 473, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000538" + ], + [ + "gene_synonym", + "ECK0155" + ], + [ + "gene_synonym", + "EcoGene:EG12332" + ], + [ + "gene_synonym", + "GI:16128149" + ], + [ + "gene_synonym", + "GeneID:944857" + ], + [ + "gene_synonym", + "JW0152" + ], + [ + "gene_synonym", + "NP_414698.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACC3" + ], + [ + "gene_synonym", + "b0156" + ], + [ + "gene_synonym", + "erpA" + ], + [ + "gene_synonym", + "yadR" + ] + ], + "dna_sequence": "ATGAGTGATGACGTAGCACTGCCGCTGGAGTTTACCGACGCAGCAGCCAACAAAGTTAAAAGCCTGATCGCTGACGAAGATAACCCGAATCTGAAATTACGCGTGTATATCACCGGTGGCGGTTGCAGCGGCTTCCAGTATGGTTTCACCTTTGATGATCAGGTGAACGAAGGCGATATGACCATCGAAAAACAGGGCGTTGGCCTGGTGGTTGATCCGATGAGCCTGCAATATCTGGTCGGCGGTTCCGTTGATTATACCGAAGGTCTGGAAGGTTCTCGTTTCATCGTGACCAACCCGAACGCGAAAAGCACCTGCGGTTGCGGTTCTTCCTTTAGTATCTAA", + "dna_sequence_length": 345, + "functions": [ + "iron-sulfur cluster insertion protein" + ], + "id": "CDS_152", + "location": [ + [ + "NC_000913", + 176610, + "+", + 345 + ] + ], + "md5": "d9a82c16a8d0b2e94ddad0ce6510c7f5", + "parent_gene": "", + "protein_md5": "f820d44147862f2bcd9e5cf6b9f34043", + "protein_translation": "MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000540" + ], + [ + "gene_synonym", + "ECK0156" + ], + [ + "gene_synonym", + "EcoGene:EG12333" + ], + [ + "gene_synonym", + "GI:16128150" + ], + [ + "gene_synonym", + "GeneID:949062" + ], + [ + "gene_synonym", + "JW0153" + ], + [ + "gene_synonym", + "NP_414699.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP0" + ], + [ + "gene_synonym", + "b0157" + ], + [ + "gene_synonym", + "yadS" + ] + ], + "dna_sequence": "ATGCTCGTCTATTGGCTGGATATAGTCGGCACAGCGGTATTTGCCATCTCCGGCGTTTTGTTAGCCGGAAAATTGCGTATGGACCCTTTTGGTGTTCTGGTACTGGGCGTGGTAACCGCAGTAGGCGGCGGGACAATTCGCGACATGGCGCTGGATCACGGCCCGGTATTTTGGGTGAAAGATCCCACCGATCTGGTCGTTGCAATGGTCACCAGCATGCTGACCATCGTGCTGGTGCGCCAGCCAAGACGCTTACCAAAATGGATGTTGCCGGTGCTGGACGCCGTTGGTCTGGCGGTGTTTGTCGGCATTGGCGTGAATAAAGCCTTTAATGCGGAAGCCGGTCCGTTAATCGCGGTTTGTATGGGCGTCATTACTGGCGTTGGCGGCGGGATCATTCGTGATGTTCTGGCCCGCGAAATCCCCATGATTTTACGTACAGAAATCTACGCAACTGCCTGTATTATCGGCGGTATTGTCCACGCTACGGCTTATTACACATTTTCCGTACCACTGGAAACAGCCAGTATGATGGGCATGGTCGTGACGCTATTGATTCGGCTGGCGGCTATTCGTTGGCATCTTAAGCTACCGACGTTTGCGCTGGATGAGAATGGGCGTTGA", + "dna_sequence_length": 624, + "functions": [ + "UPF0126 family inner membrane protein" + ], + "id": "CDS_153", + "location": [ + [ + "NC_000913", + 177624, + "-", + 624 + ] + ], + "md5": "85cd1de5c83c63e2c96c6acd0b735f2e", + "parent_gene": "", + "protein_md5": "eecf6b755b9a9b4068715fd9ae59dc6f", + "protein_translation": "MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000542" + ], + [ + "gene_synonym", + "ECK0157" + ], + [ + "gene_synonym", + "EcoGene:EG12334" + ], + [ + "gene_synonym", + "GI:16128151" + ], + [ + "gene_synonym", + "GeneID:947574" + ], + [ + "gene_synonym", + "JW0154" + ], + [ + "gene_synonym", + "NP_414700.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37028" + ], + [ + "gene_synonym", + "b0158" + ], + [ + "gene_synonym", + "btuF" + ], + [ + "gene_synonym", + "yadT" + ] + ], + "dna_sequence": "ATGGCTAAGTCACTGTTCAGGGCGCTGGTCGCCCTGTCTTTTCTTGCGCCACTGTGGCTCAACGCCGCGCCGCGCGTCATCACGCTTTCTCCCGCCAACACTGAACTTGCCTTTGCCGCCGGGATCACGCCGGTTGGGGTCAGCAGCTATTCCGACTATCCTCCACAAGCGCAAAAGATTGAGCAGGTTTCCACCTGGCAGGGGATGAATCTGGAACGCATTGTCGCGCTGAAACCCGATCTGGTGATTGCCTGGCGTGGAGGTAATGCCGAGCGGCAGGTTGACCAGCTGGCTTCGCTGGGAATAAAAGTGATGTGGGTCGATGCGACAAGCATTGAACAAATTGCCAATGCGTTACGTCAACTGGCCCCCTGGAGTCCGCAACCAGACAAGGCCGAACAAGCCGCGCAATCCCTGCTGGATCAGTACGCGCAATTGAAAGCGCAATATGCTGATAAACCTAAAAAACGTGTTTTTCTGCAATTCGGCATTAATCCGCCATTTACCAGTGGAAAAGAGTCGATTCAGAACCAGGTACTCGAAGTTTGTGGCGGAGAAAACATCTTTAAAGACAGCCGGGTTCCCTGGCCGCAAGTTAGCCGCGAACAGGTGTTAGCACGCTCGCCACAGGCGATTGTCATTACAGGCGGACCGGACCAAATTCCTAAAATCAAACAATACTGGGGTGAACAGCTCAAAATTCCCGTTATTCCTCTCACGAGTGACTGGTTTGAACGTGCAAGCCCACGTATTATCCTCGCTGCACAACAGCTCTGTAATGCGCTTTCACAGGTAGATTAG", + "dna_sequence_length": 801, + "functions": [ + "vitamin B12 ABC transporter periplasmic binding protein" + ], + "id": "CDS_154", + "location": [ + [ + "NC_000913", + 178462, + "-", + 801 + ] + ], + "md5": "c3a406ff61a6f8acdb950854ee6897a7", + "parent_gene": "", + "protein_md5": "ef641f630db987af456f7d54f7bbfb7a", + "protein_translation": "MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000545" + ], + [ + "gene_synonym", + "ECK0158" + ], + [ + "gene_synonym", + "EcoGene:EG11090" + ], + [ + "gene_synonym", + "GI:16128152" + ], + [ + "gene_synonym", + "GeneID:948542" + ], + [ + "gene_synonym", + "JW0155" + ], + [ + "gene_synonym", + "NP_414701.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF12" + ], + [ + "gene_synonym", + "b0159" + ], + [ + "gene_synonym", + "mtn" + ], + [ + "gene_synonym", + "mtnN" + ], + [ + "gene_synonym", + "pfs" + ], + [ + "gene_synonym", + "yadA" + ] + ], + "dna_sequence": "ATGAAAATCGGCATCATTGGTGCAATGGAAGAAGAAGTTACGCTGCTGCGTGACAAAATCGAAAACCGTCAAACTATCAGTCTCGGCGGTTGCGAAATCTATACCGGCCAACTGAATGGAACCGAGGTTGCGCTTCTGAAATCGGGCATCGGTAAAGTCGCTGCGGCGCTGGGTGCCACTTTGCTGTTGGAACACTGCAAGCCAGATGTGATTATTAACACCGGTTCTGCCGGTGGCCTGGCACCAACGTTGAAAGTGGGCGATATCGTTGTCTCGGACGAAGCACGTTATCACGACGCGGATGTCACGGCATTTGGTTATGAATACGGTCAGTTACCAGGCTGTCCGGCAGGCTTTAAAGCTGACGATAAACTGATCGCTGCCGCTGAGGCCTGCATTGCCGAACTGAATCTTAACGCTGTACGTGGCCTGATTGTTAGCGGCGACGCTTTCATCAACGGTTCTGTTGGTCTGGCGAAAATCCGCCACAACTTCCCACAGGCCATTGCTGTAGAGATGGAAGCGACGGCAATCGCCCATGTCTGCCACAATTTCAACGTCCCGTTTGTTGTCGTACGCGCCATCTCCGACGTGGCCGATCAACAGTCTCATCTTAGCTTCGATGAGTTCCTGGCTGTTGCCGCTAAACAGTCCAGCCTGATGGTTGAGTCACTGGTGCAGAAACTTGCACATGGCTAA", + "dna_sequence_length": 699, + "functions": [ + "5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" + ], + "id": "CDS_155", + "location": [ + [ + "NC_000913", + 179153, + "-", + 699 + ] + ], + "md5": "1925039ff6d5a29cd1f4a8052f2788b7", + "parent_gene": "", + "protein_md5": "0e6003b175c65911bc68fb215270015c", + "protein_translation": "MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000548" + ], + [ + "gene_synonym", + "ECK0159" + ], + [ + "gene_synonym", + "EcoGene:EG10225" + ], + [ + "gene_synonym", + "GI:16128153" + ], + [ + "gene_synonym", + "GeneID:947177" + ], + [ + "gene_synonym", + "JW0156" + ], + [ + "gene_synonym", + "NP_414702.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15723" + ], + [ + "gene_synonym", + "b0160" + ], + [ + "gene_synonym", + "dgt" + ], + [ + "gene_synonym", + "optA" + ] + ], + "dna_sequence": "ATGGCACAGATTGATTTCCGAAAAAAAATAAACTGGCATCGTCGTTACCGTTCACCGCAGGGCGTTAAAACCGAACATGAGATCCTGCGGATCTTCGAGAGCGATCGCGGGCGTATCATCAACTCTCCGGCAATTCGTCGTCTGCAACAAAAGACCCAGGTTTTTCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGATGAACTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCGTTTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAAGCCAGCCTCTGACTGACGATCGCTGCAGCGTGGCGGCACTACGTTTACGGGACGGGGAAGAACCGCTTAACGAGCTGCGGCGCAAGATTCGTCAGGACTTATGTCATTTTGAGGGGAATGCACAAGGCATTCGCCTGGTGCATACATTGATGCGGATGAATCTCACCTGGGCACAGGTTGGCGGTATTTTAAAATATACCCGTCCGGCGTGGTGGCGTGGCGAAACGCCTGAGACACATCACTATTTAATGAAAAAGCCGGGTTATTATCTTTCTGAAGAAGCCTATATTGCCCGGTTGCGTAAAGAACTTAATTTGGCGCTTTACAGTCGTTTTCCATTAACGTGGATTATGGAAGCTGCCGACGACATCTCCTATTGTGTGGCAGACCTTGAAGATGCGGTAGAGAAAAGAATATTTACCGTTGAGCAGCTTTATCATCATTTGCACGAAGCGTGGGGCCAGCATGAGAAAGGTTCGCTCTTTTCGCTGGTGGTTGAAAATGCCTGGGAAAAATCACGCTCAAATAGTTTAAGCCGCAGTACGGAAGATCAGTTTTTTATGTATTTACGGGTAAACACCCTAAATAAACTGGTACCCTACGCGGCACAACGATTTATTGATAATCTGCCTGCGATTTTCGCCGGAACGTTTAATCATGCATTATTGGAAGATGCCAGCGAATGCAGCGATCTTCTTAAGCTATATAAAAATGTCGCTGTAAAACATGTGTTTAGCCATCCAGATGTCGAGCGGCTTGAATTGCAGGGCTATCGGGTCATTAGCGGATTATTAGAGATTTATCGTCCTTTATTAAGCCTGTCGTTATCAGACTTTACTGAACTGGTAGAAAAAGAACGGGTGAAACGTTTCCCTATTGAATCGCGCTTATTCCACAAACTCTCGACGCGCCATCGGCTGGCCTATGTCGAGGCTGTCAGTAAATTACCGTCAGATTCTCCTGAGTTTCCGCTATGGGAATATTATTACCGTTGCCGCCTGCTGCAGGATTATATCAGCGGTATGACCGACCTCTATGCGTGGGATGAATACCGACGTCTGATGGCCGTAGAACAATAA", + "dna_sequence_length": 1518, + "functions": [ + "deoxyguanosine triphosphate triphosphohydrolase" + ], + "id": "CDS_156", + "location": [ + [ + "NC_000913", + 179237, + "+", + 1518 + ] + ], + "md5": "aebc33a007f4bb80fec3db75ebd4c066", + "parent_gene": "", + "protein_md5": "2af0589e277b7c428f84a587d715d24c", + "protein_translation": "MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAALRLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ", + "protein_translation_length": 505, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000551" + ], + [ + "gene_synonym", + "ECK0160" + ], + [ + "gene_synonym", + "EcoGene:EG10463" + ], + [ + "gene_synonym", + "GI:16128154" + ], + [ + "gene_synonym", + "GeneID:947139" + ], + [ + "gene_synonym", + "JW0157" + ], + [ + "gene_synonym", + "NP_414703.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0V0" + ], + [ + "gene_synonym", + "b0161" + ], + [ + "gene_synonym", + "degP" + ], + [ + "gene_synonym", + "htrA" + ], + [ + "gene_synonym", + "ptd" + ] + ], + "dna_sequence": "ATGAAAAAAACCACATTAGCACTGAGTGCACTGGCTCTGAGTTTAGGTTTGGCGTTATCTCCGCTCTCTGCAACGGCGGCTGAGACTTCTTCAGCAACGACAGCCCAGCAGATGCCAAGCCTTGCACCGATGCTCGAAAAGGTGATGCCTTCAGTGGTCAGCATTAACGTAGAAGGTAGCACAACCGTTAATACGCCGCGTATGCCGCGTAATTTCCAGCAGTTCTTCGGTGATGATTCTCCGTTCTGCCAGGAAGGTTCTCCGTTCCAGAGCTCTCCGTTCTGCCAGGGTGGCCAGGGCGGTAATGGTGGCGGCCAGCAACAGAAATTCATGGCGCTGGGTTCCGGCGTCATCATTGATGCCGATAAAGGCTATGTCGTCACCAACAACCACGTTGTTGATAACGCGACGGTCATTAAAGTTCAACTGAGCGATGGCCGTAAGTTCGACGCGAAGATGGTTGGCAAAGATCCGCGCTCTGATATCGCGCTGATCCAAATCCAGAACCCGAAAAACCTGACCGCAATTAAGATGGCGGATTCTGATGCACTGCGCGTGGGTGATTACACCGTAGCGATTGGTAACCCGTTTGGTCTGGGCGAGACGGTAACTTCCGGGATTGTCTCTGCGCTGGGGCGTAGCGGCCTGAATGCCGAAAACTACGAAAACTTCATCCAGACCGATGCAGCGATCAACCGTGGTAACTCCGGTGGTGCGCTGGTTAACCTGAACGGCGAACTGATCGGTATCAACACCGCGATCCTCGCACCGGACGGCGGCAACATCGGTATCGGTTTTGCTATCCCGAGTAACATGGTGAAAAACCTGACCTCGCAGATGGTGGAATACGGCCAGGTGAAACGCGGTGAGCTGGGTATTATGGGGACTGAGCTGAACTCCGAACTGGCGAAAGCGATGAAAGTTGACGCCCAGCGCGGTGCTTTCGTAAGCCAGGTTCTGCCTAATTCCTCCGCTGCAAAAGCGGGCATTAAAGCGGGTGATGTGATCACCTCACTGAACGGTAAGCCGATCAGCAGCTTTGCCGCACTGCGTGCTCAGGTGGGTACTATGCCGGTAGGCAGCAAACTGACCCTGGGCTTACTGCGCGACGGTAAGCAGGTTAACGTGAACCTGGAACTGCAGCAGAGCAGCCAGAATCAGGTTGATTCCAGCTCCATCTTCAACGGCATTGAAGGCGCTGAGATGAGCAACAAAGGCAAAGATCAGGGCGTGGTAGTGAACAACGTGAAAACGGGCACTCCGGCTGCGCAGATCGGCCTGAAGAAAGGTGATGTGATTATTGGCGCGAACCAGCAGGCAGTGAAAAACATCGCTGAACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAA", + "dna_sequence_length": 1425, + "functions": [ + "serine endoprotease (protease Do), membrane-associated" + ], + "id": "CDS_157", + "location": [ + [ + "NC_000913", + 180884, + "+", + 1425 + ] + ], + "md5": "69b56203da2665463856e03344064151", + "parent_gene": "", + "protein_md5": "fb8c2814f376b032973534386ddd20a2", + "protein_translation": "MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000554" + ], + [ + "gene_synonym", + "ECK0161" + ], + [ + "gene_synonym", + "EcoGene:EG12335" + ], + [ + "gene_synonym", + "GI:90111093" + ], + [ + "gene_synonym", + "GeneID:944860" + ], + [ + "gene_synonym", + "JW5013" + ], + [ + "gene_synonym", + "NP_414704.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37047" + ], + [ + "gene_synonym", + "b0162" + ], + [ + "gene_synonym", + "cdaR" + ], + [ + "gene_synonym", + "sdaR" + ], + [ + "gene_synonym", + "yaeG" + ] + ], + "dna_sequence": "ATGGCTGGCTGGCATCTTGATACCAAAATGGCGCAGGATATCGTGGCACGTACCATGCGCATCATCGATACCAATATCAACGTAATGGATGCCCGTGGGCGAATTATCGGCAGCGGCGATCGTGAGCGTATTGGTGAATTGCACGAAGGTGCATTGCTGGTACTTTCACAGGGACGAGTCGTCGATATCGATGACGCGGTAGCACGTCATCTGCACGGTGTGCGGCAGGGGATTAATCTACCGTTACGGCTGGAAGGTGAAATTGTCGGCGTAATTGGCCTGACAGGTGAACCAGAGAATCTGCGTAAATATGGCGAACTGGTCTGCATGACGGCTGAAATGATGCTGGAACAGTCGCGGTTGATGCACTTGTTGGCGCAGGATAGCCGTTTGCGGGAAGAACTGGTGATGAACCTGATTCAGGCAGAGGAGAATACTCCCGCACTTACTGAATGGGCGCAACGGCTGGGGATCGATCTCAATCAACCGCGAGTGGTGGCTATTGTTGAGGTCGACAGCGGTCAGCTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGACAGTTTGCGTGGCGACTGGCAGGCCAACGAACTGGCGCGACCGCTGGCGCGGCTGAAAACGATGGACAATAACGGCTTGCTGCGACGAACGCTGGCGGCGTGGTTTCGCCACAATGTGCAACCGCTGGCAACGTCAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAG", + "dna_sequence_length": 1158, + "functions": [ + "carbohydrate diacid regulon transcriptional regulator", + "autoregulator" + ], + "id": "CDS_158", + "location": [ + [ + "NC_000913", + 182463, + "+", + 1158 + ] + ], + "md5": "044306e6af1875468c738b943abb3cce", + "parent_gene": "", + "protein_md5": "6351cec6a6c59d9787fee4e6e170bf47", + "protein_translation": "MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000556" + ], + [ + "gene_synonym", + "ECK0162" + ], + [ + "gene_synonym", + "EcoGene:EG12336" + ], + [ + "gene_synonym", + "GI:16128156" + ], + [ + "gene_synonym", + "GeneID:947044" + ], + [ + "gene_synonym", + "JW0159" + ], + [ + "gene_synonym", + "NP_414705.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62768" + ], + [ + "gene_synonym", + "b0163" + ], + [ + "gene_synonym", + "yaeH" + ] + ], + "dna_sequence": "ATGTACGACAATCTGAAAAGTCTGGGTATTACCAATCCTGAAGAAATTGATCGTTACAGCCTCCGGCAGGAAGCCAACAACGATATTCTGAAAATCTATTTCCAGAAAGACAAAGGCGAGTTTTTCGCCAAGAGCGTTAAGTTTAAATATCCGCGTCAGCGTAAAACGGTCGTCGCTGATGGTGTGGGTCAGGGTTATAAAGAAGTCCAGGAAATCAGCCCGAATCTACGGTATATCATTGATGAGCTTGATCAAATCTGCCAGCGTGACCGCAGCGAAGTTGATCTTAAGCGTAAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCTGGAAAAACTAACGCGTAAATAA", + "dna_sequence_length": 387, + "functions": [ + "UPF0325 family protein" + ], + "id": "CDS_159", + "location": [ + [ + "NC_000913", + 184095, + "-", + 387 + ] + ], + "md5": "3ddc2a70f3d3f6412b0a71b0b16df5e2", + "parent_gene": "", + "protein_md5": "4ddf5054a88b91559aee6478ea4a0b69", + "protein_translation": "MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEADLEKLTRK", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000559" + ], + [ + "gene_synonym", + "ECK0163" + ], + [ + "gene_synonym", + "EcoGene:EG12337" + ], + [ + "gene_synonym", + "GI:90111094" + ], + [ + "gene_synonym", + "GeneID:945002" + ], + [ + "gene_synonym", + "JW5014" + ], + [ + "gene_synonym", + "NP_414706.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37049" + ], + [ + "gene_synonym", + "b0164" + ], + [ + "gene_synonym", + "yaeI" + ] + ], + "dna_sequence": "ATGATTTCACGCCGCCGATTTTTGCAGGCTACTGCCGCGACGATAGCCACGAGCTCAGGTTTCGGTTATATGCATTACTGTGAGCCAGGCTGGTTTGAATTAATCCGTCACCGCCTCGCCTTTTTTAAAGACAACGCAGCACCATTCAAAATTCTTTTTCTGGCCGATCTCCATTACTCTCGTTTTGTTCCTTTAAGCCTGATTTCTGACGCGATTGCTCTTGGCATAGAACAAAAGCCCGATTTGATATTACTGGGCGGCGATTACGTATTATTTGATATGTCGCTGAATTTTTCGGCGTTTAGTGACGTACTCTCCCCCCTTGCCGAATGTGCGCCGACGTTTGCCTGCTTCGGCAACCACGATCGCCCTGTTGGTACAGAAAAAAATCACTTAATTGGCGAGACGTTGAAATCAGCGGGCATCACGGTGTTGTTTAACCAGGCTACGGTGATCGCCACGCCGAACAGGCAATTCGAACTGGTAGGCACTGGTGACTTATGGGCCGGACAATGCAAACCGCCTCCCGCCAGCGAAGCCAATCTGCCAAGACTGGTGCTGGCGCATAATCCCGACAGCAAAGAAGTCATGCGTGATGAACCCTGGGATCTGATGCTGTGCGGCCATACTCACGGCGGGCAACTGCGCGTACCGTTGGTTGGTGAACCTTTTGCCCCTGTCGAAGATAAACGTTACGTCGCCGGATTAAATGCCTTTGGCGAAAGACACATCTACACAACCCGTGGCGTGGGCAGTTTGTATGGTTTGCGTCTGAACTGCCGCCCGGAAGTAACGATGCTGGAACTGGTGTAG", + "dna_sequence_length": 813, + "functions": [ + "phosphodiesterase with model substrate bis-pNPP" + ], + "id": "CDS_160", + "location": [ + [ + "NC_000913", + 185069, + "-", + 813 + ] + ], + "md5": "70867f2a7a0d5da3cf5403789de56d3d", + "parent_gene": "", + "protein_md5": "26945a7f97dfc64de2925cea9fd84b75", + "protein_translation": "MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000565" + ], + [ + "gene_synonym", + "ECK0164" + ], + [ + "gene_synonym", + "EcoGene:EG10207" + ], + [ + "gene_synonym", + "GI:16128159" + ], + [ + "gene_synonym", + "GeneID:944862" + ], + [ + "gene_synonym", + "JW0161" + ], + [ + "gene_synonym", + "NP_414708.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9D8" + ], + [ + "gene_synonym", + "b0166" + ], + [ + "gene_synonym", + "dapD" + ], + [ + "gene_synonym", + "ssa" + ] + ], + "dna_sequence": "ATGCAGCAGTTACAGAACATTATTGAAACCGCTTTTGAACGCCGTGCCGAGATCACGCCAGCCAATGCAGACACCGTTACCCGCGAAGCGGTAAATCAGGTGATCGCCCTGCTGGATTCCGGCGCACTGCGTGTAGCGGAAAAAATTGACGGTCAGTGGGTGACGCATCAGTGGTTGAAAAAAGCGGTGCTGCTCTCTTTCCGTATTAATGATAATCAGGTGATCGAAGGGGCAGAAAGCCGCTACTTCGACAAAGTGCCGATGAAATTCGCCGACTACGACGAAGCACGTTTCCAGAAAGAAGGCTTCCGCGTTGTGCCACCAGCGGCGGTACGTCAGGGTGCGTTTATTGCCCGTAACACCGTGCTGATGCCGTCTTACGTCAACATCGGCGCATATGTTGATGAAGGCACCATGGTTGATACCTGGGCGACCGTCGGTTCTTGTGCGCAGATTGGTAAAAACGTCCACCTTTCCGGTGGCGTGGGCATCGGCGGCGTGCTGGAACCGCTGCAGGCTAACCCAACCATCATTGAAGATAATTGCTTCATCGGCGCGCGCTCTGAAGTGGTTGAAGGGGTGATTGTCGAAGAAGGTTCCGTCATTTCCATGGGCGTATACATTGGTCAGAGCACCCGTATTTACGACCGTGAAACCGGCGAAATCCACTACGGTCGCGTTCCGGCGGGGTCTGTGGTTGTTTCAGGTAATCTGCCGTCAAAAGATGGCAAATACAGCCTCTACTGTGCGGTTATCGTTAAGAAAGTTGACGCGAAAACTCGCGGCAAAGTCGGCATTAACGAACTGCTGCGTACCATCGACTAA", + "dna_sequence_length": 825, + "functions": [ + "2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" + ], + "id": "CDS_161", + "location": [ + [ + "NC_000913", + 185947, + "-", + 825 + ] + ], + "md5": "c187c16d2b99b45ee6200a83498e84d8", + "parent_gene": "", + "protein_md5": "456634840ecc8c243e1ffa2773ca7012", + "protein_translation": "MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000568" + ], + [ + "gene_synonym", + "ECK0165" + ], + [ + "gene_synonym", + "EcoGene:EG11411" + ], + [ + "gene_synonym", + "GI:16128160" + ], + [ + "gene_synonym", + "GeneID:944863" + ], + [ + "gene_synonym", + "JW0162" + ], + [ + "gene_synonym", + "NP_414709.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27249" + ], + [ + "gene_synonym", + "b0167" + ], + [ + "gene_synonym", + "glnD" + ] + ], + "dna_sequence": "ATGAATACCCTTCCAGAACAGTACGCAAACACCGCTCTCCCCACCCTGCCCGGTCAACCGCAAAATCCATGCGTCTGGCCCCGTGATGAATTAACCGTCGGTGGGATAAAAGCCCATATCGATACTTTCCAGCGTTGGCTGGGTGATGCCTTTGACAATGGGATCTCTGCAGAACAGTTGATTGAGGCGCGCACCGAGTTTATCGACCAGCTCCTGCAACGATTATGGATTGAAGCGGGATTCAGCCAGATTGCCGACCTGGCATTGGTCGCCGTCGGTGGCTACGGTCGTGGCGAGCTGCATCCACTTTCAGACGTCGATTTACTGATTTTAAGCCGTAAAAAGCTCCCGGACGATCAGGCGCAAAAAGTGGGCGAGCTGTTAACGCTGCTCTGGGATGTAAAGCTGGAAGTCGGTCATAGCGTGCGCACGCTTGAAGAGTGCATGCTGGAAGGGTTATCGGATTTAACCGTCGCCACCAATTTAATCGAATCCCGCTTATTAATTGGCGATGTTGCGCTGTTCCTCGAACTGCAAAAACATATTTTCAGCGAAGGATTCTGGCCTTCCGACAAGTTCTACGCGGCGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCTGGATGAAATGGTCGGGTTTGGCTTCTTAACCTCAGCGGAGCGGGCGGAATTAAACGAATGTCTGCATATATTGTGGCGTATTCGCTTTGCCCTGCATCTGGTCGTCAGCCGTTACGATAATCGCCTGTTATTCGATCGCCAGCTTAGCGTCGCCCAGCGTCTGAATTACAGTGGTGAAGGTAACGAACCGGTCGAGCGGATGATGAAGGATTACTTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACACTATTTATGCGCCAGCCGGAAGCCATCTTGCGTATGTTCTACACCATGGTGCACAACAGTGCGATCACCGGCATTTACTCCACCACGCTGCGCCAGTTACGCCATGCCCGTCGCCATCTGCAACAACCGCTGTGTAATATTCCGGAAGCACGAAAACTGTTTTTGAGCATTCTGCGTCACCCCGGAGCGGTGCGGCGCGGGCTATTGCCAATGCATCGCCATAGCGTGCTCGGCGCGTATATGCCGCAATGGTCGCATATCGTCGGGCAGATGCAGTTTGATCTGTTCCACGCCTACACGGTGGATGAACATACTATCCGCGTGATGCTGAAACTGGAGAGTTTTGCCAGTGAAGAAACGCGCCAGCGCCATCCGTTGTGTGTGGACGTCTGGCCGCGCCTGCCGTCAACTGAGCTGATTTTCATCGCCGCGCTGTTTCACGATATCGCCAAAGGACGCGGCGGCGACCACTCCATTCTCGGTGCTCAGGATGTAGTGCATTTTGCCGAACTCCACGGGCTGAACTCACGCGAAACACAGCTGGTCGCCTGGCTGGTTCGCCAGCACCTGTTGATGTCGGTGACCGCCCAACGCCGCGATATTCAGGACCCGGAAGTCATCAAGCAGTTTGCCGAAGAAGTGCAAACGGAAAATCGTCTGCGCTATCTGGTATGCCTGACTGTGGCTGACATTTGCGCCACCAACGAAACGCTGTGGAATAGCTGGAAGCAAAGTCTGTTGCGTGAGCTCTACTTTGCCACCGAAAAGCAGCTACGACGCGGAATGCAAAACACGCCGGATATGCGCGAACGGGTTCGCCATCACCAACTCCAGGCACTGGCACTACTGCGCATGGATAACATCGACGAAGAGGCGCTGCACCAAATTTGGTCACGCTGTCGTGCTAACTATTTTGTCCGCCATAGCCCAAATCAACTGGCCTGGCATGCCCGCCATTTATTACAGCATGATTTAAGCAAACCGCTGGTATTGCTTAGCCCGCAGGCTACGCGTGGAGGCACCGAGATTTTTATCTGGAGCCCGGACCGCCCTTATCTGTTTGCCGCCGTCTGTGCCGAATTAGACCGCCGCAATTTAAGTGTTCACGACGCACAAATTTTCACCACTCGCGACGGTATGGCGATGGATACCTTTATCGTGCTGGAACCCGATGGCAACCCGCTGTCCGCAGATCGTCATGAGGTTATTCGGTTTGGTCTGGAGCAAGTACTGACGCAAAGTAGCTGGCAGCCACCGCAGCCCCGTCGCCAACCCGCCAAATTACGCCATTTTACTGTTGAAACCGAAGTAACGTTTTTGCCGACCCATACCGACCGCAAATCGTTCCTCGAACTGATCGCCCTCGACCAACCTGGACTGCTGGCGCGAGTCGGGAAAATTTTTGCCGATCTGGGAATTTCGCTTCATGGTGCCCGAATTACAACCATTGGCGAGCGAGTAGAAGATTTATTCATAATTGCCACCGCTGACCGGCGTGCGCTTAATAACGAGTTGCAGCAGGAAGTGCATCAGCGGTTGACAGAGGCCCTCAATCCAAACGATAAAGGGTGA", + "dna_sequence_length": 2673, + "functions": [ + "uridylyltransferase" + ], + "id": "CDS_162", + "location": [ + [ + "NC_000913", + 188650, + "-", + 2673 + ] + ], + "md5": "c91c705fec887ab8d9ccc7ca05252c8d", + "parent_gene": "", + "protein_md5": "ef4b2dd86af8aab2d64baa976a7c4466", + "protein_translation": "MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQRWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVHNSAITGIYSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPNDKG", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000571" + ], + [ + "gene_synonym", + "ECK0166" + ], + [ + "gene_synonym", + "EcoGene:EG10570" + ], + [ + "gene_synonym", + "GI:16128161" + ], + [ + "gene_synonym", + "GeneID:947882" + ], + [ + "gene_synonym", + "JW0163" + ], + [ + "gene_synonym", + "NP_414710.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE18" + ], + [ + "gene_synonym", + "b0168" + ], + [ + "gene_synonym", + "map" + ], + [ + "gene_synonym", + "pepM" + ] + ], + "dna_sequence": "ATGGCTATCTCAATCAAGACCCCAGAAGATATCGAAAAAATGCGCGTCGCTGGCCGACTGGCTGCCGAAGTGCTGGAGATGATCGAACCGTATGTTAAACCGGGCGTCAGCACCGGCGAGCTGGATCGCATCTGTAATGATTACATTGTTAATGAACAACACGCGGTTTCTGCCTGCCTCGGCTATCACGGCTATCCGAAATCCGTTTGCATCTCTATTAATGAAGTGGTGTGCCACGGTATCCCGGACGATGCTAAGCTGCTGAAAGATGGCGATATCGTTAACATTGATGTCACCGTAATCAAAGATGGTTTCCACGGCGATACCTCGAAAATGTTTATCGTCGGTAAGCCGACCATCATGGGCGAACGTCTGTGCCGCATCACGCAAGAAAGCCTGTACCTGGCGCTACGCATGGTAAAACCAGGCATTAATCTGCGCGAAATCGGTGCGGCGATTCAGAAATTTGTCGAAGCAGAAGGCTTCTCCGTCGTTCGTGAATATTGCGGACACGGTATTGGTCGCGGCTTCCATGAAGAACCGCAGGTGCTGCACTATGACTCCCGTGAAACCAACGTCGTACTGAAACCTGGGATGACGTTCACCATCGAGCCAATGGTCAACGCGGGTAAAAAAGAGATCCGCACCATGAAAGATGGCTGGACGGTAAAAACCAAAGATCGCAGCTTGTCTGCACAATATGAGCATACTATTGTGGTGACTGATAACGGCTGCGAAATTCTGACGCTACGCAAGGATGACACCATCCCGGCGATAATCTCGCACGACGAATAA", + "dna_sequence_length": 795, + "functions": [ + "methionine aminopeptidase" + ], + "id": "CDS_163", + "location": [ + [ + "NC_000913", + 189506, + "-", + 795 + ] + ], + "md5": "39a60be35c76ad3acc3e43c67a05f0cc", + "parent_gene": "", + "protein_md5": "c168653e3c8d2bb35f52032fea2ce506", + "protein_translation": "MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000575" + ], + [ + "gene_synonym", + "ECK0168" + ], + [ + "gene_synonym", + "EcoGene:EG10901" + ], + [ + "gene_synonym", + "GI:16128162" + ], + [ + "gene_synonym", + "GeneID:947874" + ], + [ + "gene_synonym", + "JW0164" + ], + [ + "gene_synonym", + "NP_414711.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7V0" + ], + [ + "gene_synonym", + "b0169" + ], + [ + "gene_synonym", + "rpsB" + ] + ], + "dna_sequence": "ATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGTCACCAGACCCGTTACTGGAACCCGAAAATGAAGCCGTTCATCTTCGGTGCGCGTAACAAAGTTCACATCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCGCAAAGGTAAAATCCTTTTCGTTGGTACTAAACGCGCTGCAAGCGAAGCGGTGAAAGACGCTGCTCTGAGCTGCGACCAGTTCTTCGTGAACCATCGCTGGCTGGGCGGTATGCTGACTAACTGGAAAACCGTTCGTCAGTCCATCAAACGTCTGAAAGACCTGGAAACTCAGTCTCAGGACGGTACTTTCGACAAGCTGACCAAGAAAGAAGCGCTGATGCGCACTCGTGAGCTGGAGAAACTGGAAAACAGCCTGGGCGGTATCAAAGACATGGGCGGTCTGCCGGACGCTCTGTTTGTAATCGATGCTGACCACGAACACATTGCTATCAAAGAAGCAAACAACCTGGGTATTCCGGTATTTGCTATCGTTGATACCAACTCTGATCCGGACGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAA", + "dna_sequence_length": 726, + "functions": [ + "30S ribosomal subunit protein S2" + ], + "id": "CDS_164", + "location": [ + [ + "NC_000913", + 189874, + "+", + 726 + ] + ], + "md5": "045a6d2aec21ab8ef4164c70b7ad9985", + "parent_gene": "", + "protein_md5": "f0974d30d7835f4b52b27c2f40e89ca4", + "protein_translation": "MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000579" + ], + [ + "gene_synonym", + "ECK0169" + ], + [ + "gene_synonym", + "EcoGene:EG11033" + ], + [ + "gene_synonym", + "GI:16128163" + ], + [ + "gene_synonym", + "GeneID:944866" + ], + [ + "gene_synonym", + "JW0165" + ], + [ + "gene_synonym", + "NP_414712.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6P1" + ], + [ + "gene_synonym", + "b0170" + ], + [ + "gene_synonym", + "tsf" + ] + ], + "dna_sequence": "ATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTACTGGCGCAGGCATGATGGATTGCAAAAAAGCACTGACTGAAGCTAACGGCGACATCGAGCTGGCAATCGAAAACATGCGTAAGTCCGGTGCTATTAAAGCAGCGAAAAAAGCAGGCAACGTTGCTGCTGACGGCGTGATCAAAACCAAAATCGACGGCAACTACGGCATCATTCTGGAAGTTAACTGCCAGACTGACTTCGTTGCAAAAGACGCTGGTTTCCAGGCGTTCGCAGACAAAGTTCTGGACGCAGCTGTTGCTGGCAAAATCACTGACGTTGAAGTTCTGAAAGCACAGTTCGAAGAAGAACGTGTTGCGCTGGTAGCGAAAATTGGTGAAAACATCAACATTCGCCGCGTTGCTGCGCTGGAAGGCGACGTTCTGGGTTCTTATCAGCACGGTGCGCGTATCGGCGTTCTGGTTGCTGCTAAAGGCGCTGACGAAGAGCTGGTTAAACACATCGCTATGCACGTTGCTGCAAGCAAGCCAGAATTCATCAAACCGGAAGACGTATCCGCTGAAGTGGTAGAAAAAGAATACCAGGTACAGCTGGATATCGCGATGCAGTCTGGTAAGCCGAAAGAAATCGCAGAGAAAATGGTTGAAGGCCGCATGAAGAAATTCACCGGCGAAGTTTCTCTGACCGGTCAGCCGTTCGTTATGGAACCAAGCAAAACTGTTGGTCAGCTGCTGAAAGAGCATAACGCTGAAGTGACTGGCTTCATCCGCTTCGAAGTGGGTGAAGGCATCGAGAAAGTTGAGACTGACTTTGCAGCAGAAGTTGCTGCGATGTCCAAGCAGTCTTAA", + "dna_sequence_length": 852, + "functions": [ + "translation elongation factor EF-Ts" + ], + "id": "CDS_165", + "location": [ + [ + "NC_000913", + 190857, + "+", + 852 + ] + ], + "md5": "620e05082af5bfbd34f0075e869a50b3", + "parent_gene": "", + "protein_md5": "5c95adf3bad4ca4fb76bb94204974137", + "protein_translation": "MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000582" + ], + [ + "gene_synonym", + "ECK0170" + ], + [ + "gene_synonym", + "EcoGene:EG11539" + ], + [ + "gene_synonym", + "GI:16128164" + ], + [ + "gene_synonym", + "GeneID:944989" + ], + [ + "gene_synonym", + "JW0166" + ], + [ + "gene_synonym", + "NP_414713.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E9" + ], + [ + "gene_synonym", + "b0171" + ], + [ + "gene_synonym", + "pyrH" + ], + [ + "gene_synonym", + "smbA" + ], + [ + "gene_synonym", + "umk" + ] + ], + "dna_sequence": "ATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGCTCTGCAGGGCACTGAAGGCTTCGGTATTGATGCAAGCATACTGGATCGTATGGCTCAGGAAATCAAAGAACTGGTTGAACTGGGTATTCAGGTTGGTGTGGTGATTGGTGGGGGTAACCTGTTCCGTGGCGCTGGTCTGGCGAAAGCGGGTATGAACCGCGTTGTGGGCGACCACATGGGGATGCTGGCGACCGTAATGAACGGCCTGGCAATGCGTGATGCACTGCACCGCGCCTATGTGAACGCTCGTCTGATGTCCGCTATTCCATTGAATGGCGTGTGCGACAGCTACAGCTGGGCAGAAGCTATCAGCCTGTTGCGCAACAACCGTGTGGTGATCCTCTCCGCCGGTACAGGTAACCCGTTCTTTACCACCGACTCAGCAGCTTGCCTGCGTGGTATCGAAATTGAAGCCGATGTGGTGCTGAAAGCAACCAAAGTTGACGGCGTGTTTACCGCTGATCCGGCGAAAGATCCAACCGCAACCATGTACGAGCAACTGACTTACAGCGAAGTGCTGGAAAAAGAGCTGAAAGTCATGGACCTGGCGGCCTTCACGCTGGCTCGTGACCATAAATTACCGATTCGTGTTTTCAATATGAACAAACCGGGTGCGCTGCGCCGTGTGGTAATGGGTGAAAAAGAAGGGACTTTAATCACGGAATAA", + "dna_sequence_length": 726, + "functions": [ + "uridylate kinase" + ], + "id": "CDS_166", + "location": [ + [ + "NC_000913", + 191855, + "+", + 726 + ] + ], + "md5": "75ed90a29ccaf4c565338dd4671a8195", + "parent_gene": "", + "protein_md5": "2a381e1e09c703d61823ce7f7d5643e3", + "protein_translation": "MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000588" + ], + [ + "gene_synonym", + "ECK0171" + ], + [ + "gene_synonym", + "EcoGene:EG10335" + ], + [ + "gene_synonym", + "GI:16128165" + ], + [ + "gene_synonym", + "GeneID:946122" + ], + [ + "gene_synonym", + "JW0167" + ], + [ + "gene_synonym", + "NP_414714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A805" + ], + [ + "gene_synonym", + "b0172" + ], + [ + "gene_synonym", + "frr" + ], + [ + "gene_synonym", + "rrf" + ] + ], + "dna_sequence": "GTGATTAGCGATATCAGAAAAGATGCTGAAGTACGCATGGACAAATGCGTAGAAGCGTTCAAAACCCAAATCAGCAAAATACGCACGGGTCGTGCTTCTCCCAGCCTGCTGGATGGCATTGTCGTGGAATATTACGGCACGCCGACGCCGCTGCGTCAGCTGGCAAGCGTAACGGTAGAAGATTCCCGTACACTGAAAATCAACGTGTTTGATCGTTCAATGTCTCCGGCCGTTGAAAAAGCGATTATGGCGTCCGATCTTGGCCTGAACCCGAACTCTGCGGGTAGCGACATCCGTGTTCCGCTGCCGCCGCTGACGGAAGAACGTCGTAAAGATCTGACCAAAATCGTTCGTGGTGAAGCAGAACAAGCGCGTGTTGCAGTACGTAACGTGCGTCGTGACGCGAACGACAAAGTGAAAGCACTGTTGAAAGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGA", + "dna_sequence_length": 558, + "functions": [ + "ribosome recycling factor" + ], + "id": "CDS_167", + "location": [ + [ + "NC_000913", + 192872, + "+", + 558 + ] + ], + "md5": "cd394e4d7ee3a4e2f694d502d1ee3005", + "parent_gene": "", + "protein_md5": "0e5b9e7c05a91724267593844409d8e5", + "protein_translation": "MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000592" + ], + [ + "gene_synonym", + "ECK0172" + ], + [ + "gene_synonym", + "EcoGene:EG12715" + ], + [ + "gene_synonym", + "GI:16128166" + ], + [ + "gene_synonym", + "GeneID:945019" + ], + [ + "gene_synonym", + "JW0168" + ], + [ + "gene_synonym", + "NP_414715.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45568" + ], + [ + "gene_synonym", + "b0173" + ], + [ + "gene_synonym", + "dxr" + ], + [ + "gene_synonym", + "ispC" + ], + [ + "gene_synonym", + "yaeM" + ] + ], + "dna_sequence": "ATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCAGGCAAAAATGTCACTCGCATGGTAGAACAGTGCCTGGAATTCTCTCCCCGCTATGCCGTAATGGACGATGAAGCGAGTGCGAAACTTCTTAAAACGATGCTACAGCAACAGGGTAGCCGCACCGAAGTCTTAAGTGGGCAACAAGCCGCTTGCGATATGGCAGCGCTTGAGGATGTTGATCAGGTGATGGCAGCCATTGTTGGCGCTGCTGGGCTGTTACCTACGCTTGCTGCGATCCGCGCGGGTAAAACCATTTTGCTGGCCAATAAAGAATCACTGGTTACCTGCGGACGTCTGTTTATGGACGCCGTAAAGCAGAGCAAAGCGCAATTGTTACCGGTCGATAGCGAACATAACGCCATTTTTCAGAGTTTACCGCAACCTATCCAGCATAATCTGGGATACGCTGACCTTGAGCAAAATGGCGTGGTGTCCATTTTACTTACCGGGTCTGGTGGCCCTTTCCGTGAGACGCCATTGCGCGATTTGGCAACAATGACGCCGGATCAAGCCTGCCGTCATCCGAACTGGTCGATGGGGCGTAAAATTTCTGTCGATTCGGCTACCATGATGAACAAAGGTCTGGAATACATTGAAGCGCGTTGGCTGTTTAACGCCAGCGCCAGCCAGATGGAAGTGCTGATTCACCCGCAGTCAGTGATTCACTCAATGGTGCGCTATCAGGACGGCAGTGTTCTGGCGCAGCTGGGGGAACCGGATATGCGTACGCCAATTGCCCACACCATGGCATGGCCGAATCGCGTGAACTCTGGCGTGAAGCCGCTCGATTTTTGCAAACTAAGTGCGTTGACATTTGCCGCACCGGATTATGATCGTTATCCATGCCTGAAACTGGCGATGGAGGCGTTCGAACAAGGCCAGGCAGCGACGACAGCATTGAATGCCGCAAACGAAATCACCGTTGCTGCTTTTCTTGCGCAACAAATCCGCTTTACGGATATCGCTGCGTTGAATTTATCCGTACTGGAAAAAATGGATATGCGCGAACCACAATGTGTGGACGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGA", + "dna_sequence_length": 1197, + "functions": [ + "1-deoxy-D-xylulose 5-phosphate reductoisomerase" + ], + "id": "CDS_168", + "location": [ + [ + "NC_000913", + 193521, + "+", + 1197 + ] + ], + "md5": "f0e939c6c6d492fea23aeaa526f58f83", + "parent_gene": "", + "protein_md5": "e8cd2b09ad65623d0bbb2d02485e3fcb", + "protein_translation": "MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000595" + ], + [ + "gene_synonym", + "ECK0173" + ], + [ + "gene_synonym", + "EcoGene:EG13329" + ], + [ + "gene_synonym", + "GI:16128167" + ], + [ + "gene_synonym", + "GeneID:944874" + ], + [ + "gene_synonym", + "JW0169" + ], + [ + "gene_synonym", + "NP_414716.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60472" + ], + [ + "gene_synonym", + "b0174" + ], + [ + "gene_synonym", + "ispU" + ], + [ + "gene_synonym", + "rth" + ], + [ + "gene_synonym", + "uppS" + ], + [ + "gene_synonym", + "yaeS" + ] + ], + "dna_sequence": "GTGATGTTGTCTGCTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCTTTAGTAGTGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACCAGATCAGATAGATGAAGAGATGCTAAACCAGCATGTCTGTATGCATGAACTGGCCCCTGTAGATTTAGTAATTAGGACTGGGGGGGAGCATCGCATTAGTAACTTTTTGCTTTGGCAAATTGCCTATGCCGAACTTTACTTTACAGATGTTCTCTGGCCCGATTTCGATGAACAAGACTTTGAAGGGGCGTTAAATGCCTTTGCTAATCGAGAGCGTCGTTTCGGCGGCACCGAGCCCGGTGATGAAACAGCCTGA", + "dna_sequence_length": 762, + "functions": [ + "undecaprenyl pyrophosphate synthase" + ], + "id": "CDS_169", + "location": [ + [ + "NC_000913", + 194903, + "+", + 762 + ] + ], + "md5": "fb743ab4720198c8f5952a04a2562727", + "parent_gene": "", + "protein_md5": "a95d322438644ad81c219c6322ffad06", + "protein_translation": "MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000600" + ], + [ + "gene_synonym", + "ECK0174" + ], + [ + "gene_synonym", + "EcoGene:EG10139" + ], + [ + "gene_synonym", + "GI:90111095" + ], + [ + "gene_synonym", + "GeneID:944876" + ], + [ + "gene_synonym", + "JW5810" + ], + [ + "gene_synonym", + "NP_414717.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABG1" + ], + [ + "gene_synonym", + "b0175" + ], + [ + "gene_synonym", + "cdsA" + ] + ], + "dna_sequence": "TTGCTGAAGTATCGCCTGATATCTGCTTTTGTGTTAATACCCGTCGTCATCGCGGCGTTGTTTCTGTTGCCGCCGGTGGGGTTCGCCATTGTAACGCTGGTGGTCTGCATGCTGGCAGCGTGGGAATGGGGACAGCTTAGCGGTTTTACCACTCGTTCGCAGCGAGTATGGTTGGCGGTGTTATGCGGGTTATTGTTGGCGCTGATGCTTTTTCTGTTGCCGGAATATCACCGAAATATTCATCAACCGCTGGTTGAAATCTCACTTTGGGCTTCGCTGGGTTGGTGGATTGTCGCGCTATTGCTGGTGCTGTTTTACCCAGGTTCCGCAGCAATCTGGCGTAACTCTAAAACATTGCGCCTTATTTTTGGCGTGCTAACCATTGTTCCCTTCTTCTGGGGCATGCTGGCGTTACGGGCCTGGCACTATGACGAGAATCATTACAGTGGCGCAATATGGCTGCTCTATGTCATGATCCTGGTATGGGGCGCTGACTCCGGCGCATATATGTTTGGCAAATTGTTTGGTAAACATAAGCTGGCACCGAAGGTTTCTCCGGGTAAAACCTGGCAAGGCTTTATCGGTGGACTCGCTACTGCAGCGGTAATCTCATGGGGTTATGGCATGTGGGCGAATCTCGACGTCGCTCCCGTCACCTTACTCATTTGCTCTATTGTCGCAGCGTTAGCCTCAGTGCTCGGCGATCTGACCGAGAGTATGTTTAAGCGTGAAGCAGGAATTAAGGACAGCGGTCATTTAATTCCAGGACACGGTGGTATTTTAGATCGTATTGATAGCCTGACGGCTGCGGTACCGGTCTTTGCTTGCTTGTTGTTACTGGTATTCAGGACGCTTTAA", + "dna_sequence_length": 858, + "functions": [ + "CDP-diglyceride synthase" + ], + "id": "CDS_170", + "location": [ + [ + "NC_000913", + 195677, + "+", + 858 + ] + ], + "md5": "1b8e824aa6c359d6dd7d8277b7b5654c", + "parent_gene": "", + "protein_md5": "75f6a8137282a1b04f4365d3b7438f8b", + "protein_translation": "MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLLVFRTL", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000603" + ], + [ + "gene_synonym", + "ECK0175" + ], + [ + "gene_synonym", + "EcoGene:EG12436" + ], + [ + "gene_synonym", + "GI:16128169" + ], + [ + "gene_synonym", + "GeneID:944871" + ], + [ + "gene_synonym", + "JW0171" + ], + [ + "gene_synonym", + "NP_414718.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEH1" + ], + [ + "gene_synonym", + "b0176" + ], + [ + "gene_synonym", + "ecfE" + ], + [ + "gene_synonym", + "rseP" + ], + [ + "gene_synonym", + "yaeL" + ] + ], + "dna_sequence": "ATGCTGAGTTTTCTCTGGGATTTGGCTTCGTTCATCGTTGCACTGGGTGTACTTATCACCGTGCATGAATTTGGTCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCGCCACCATGCCTTCAATAATAAATCTGTCGGCCAACGAGCGGCGATTATTGCCGCAGGTCCGGTTGCAAACTTCATTTTTGCTATCTTTGCCTACTGGCTGGTTTTTATTATTGGTGTGCCTGGCGTACGTCCGGTGGTTGGCGAAATAGCAGCCAATTCGATAGCTGCGGAAGCACAAATTGCACCAGGTACGGAACTAAAAGCCGTAGATGGTATCGAAACGCCTGATTGGGATGCCGTGCGTTTGCAGTTGGTCGATAAAATTGGCGATGAAAGCACCACCATTACAGTAGCGCCATTTGGCAGCGACCAACGGCGGGATGTAAAGCTCGATTTACGTCACTGGGCGTTTGAGCCTGATAAAGAAGATCCGGTATCTTCGCTGGGGATTCGTCCTCGTGGGCCGCAAATTGAACCTGTACTGGAAAATGTGCAGCCAAACTCGGCGGCAAGCAAGGCAGGTTTGCAAGCAGGCGACAGGATCGTTAAAGTCGATGGTCAGCCCTTAACGCAGTGGGTGACCTTTGTGATGCTTGTCCGGGATAACCCGGGTAAATCCTTAGCGTTAGAAATCGAAAGGCAGGGGAGTCCCTTGTCTTTGACATTAATCCCGGAGAGTAAACCGGGTAATGGTAAAGCGATTGGTTTTGTCGGTATTGAGCCGAAAGTCATTCCTTTGCCAGATGAGTATAAAGTTGTACGCCAGTATGGGCCGTTCAACGCCATCGTCGAAGCCACGGACAAAACGTGGCAGCTGATGAAGCTGACGGTCAGTATGCTGGGAAAATTGATCACCGGTGATGTGAAACTGAACAACCTCAGTGGGCCGATCTCTATCGCCAAGGGGGCTGGGATGACAGCGGAACTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATAATTAACCTGTTTCCGTTGCCCGTACTTGACGGGGGGCATCTGCTGTTCCTTGCGATCGAAAAGATCAAGGGCGGACCGGTATCCGAGCGGGTTCAAGACTTTTGTTATCGCATTGGCTCGATTCTGCTGGTGCTGTTAATGGGGCTTGCACTTTTCAATGATTTCTCTCGGTTATGA", + "dna_sequence_length": 1353, + "functions": [ + "inner membrane zinc RIP metalloprotease", + "RpoE activator, by degrading RseA", + "cleaved signal peptide endoprotease" + ], + "id": "CDS_171", + "location": [ + [ + "NC_000913", + 196546, + "+", + 1353 + ] + ], + "md5": "d1ad92468682ca56d72bd6cb128a2687", + "parent_gene": "", + "protein_md5": "d976d8d9918e87307e67da061135fb82", + "protein_translation": "MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000605" + ], + [ + "gene_synonym", + "ECK0176" + ], + [ + "gene_synonym", + "EcoGene:EG12676" + ], + [ + "gene_synonym", + "GI:16128170" + ], + [ + "gene_synonym", + "GeneID:944870" + ], + [ + "gene_synonym", + "JW0172" + ], + [ + "gene_synonym", + "NP_414719.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A940" + ], + [ + "gene_synonym", + "b0177" + ], + [ + "gene_synonym", + "bamA" + ], + [ + "gene_synonym", + "ecfK" + ], + [ + "gene_synonym", + "omp85" + ], + [ + "gene_synonym", + "yaeT" + ], + [ + "gene_synonym", + "yzzN" + ], + [ + "gene_synonym", + "yzzY" + ] + ], + "dna_sequence": "ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTAGCAGCGCCACCGTATACGGTGCTGAAGGGTTCGTAGTGAAAGATATTCATTTCGAAGGCCTTCAGCGTGTCGCCGTTGGTGCGGCCCTCCTCAGTATGCCGGTGCGCACAGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCCGATATCGAGAAAGGTCTGGAAGACTTCTACTACAGCGTCGGTAAATATAGCGCCAGCGTAAAAGCTGTCGTGACCCCGCTGCCGCGCAACCGTGTTGACCTAAAACTGGTGTTCCAGGAAGGTGTGTCAGCTGAAATCCAGCAAATTAACATTGTTGGTAACCATGCTTTCACCACCGACGAACTGATCTCTCATTTCCAACTGCGTGACGAAGTGCCGTGGTGGAACGTGGTAGGCGATCGTAAATACCAGAAACAGAAACTGGCGGGCGACCTTGAAACCCTGCGCAGCTACTATCTGGATCGCGGTTATGCCCGTTTCAACATCGACTCTACCCAGGTCAGTCTGACGCCAGATAAAAAAGGTATTTACGTCACGGTGAACATCACCGAAGGCGATCAGTACAAGCTTTCTGGCGTTGAAGTGAGCGGCAACCTTGCCGGGCACTCCGCTGAAATTGAGCAGCTGACTAAGATCGAGCCGGGTGAGCTGTATAACGGCACCAAAGTGACCAAGATGGAAGATGACATCAAAAAGCTTCTCGGTCGCTATGGTTATGCCTATCCGCGCGTACAGTCGATGCCCGAAATTAACGATGCCGACAAAACCGTTAAATTACGTGTGAACGTTGATGCGGGTAACCGTTTCTACGTGCGTAAGATCCGTTTTGAAGGTAACGATACCTCGAAAGATGCCGTCCTGCGTCGCGAAATGCGTCAGATGGAAGGTGCATGGCTGGGGAGCGATCTGGTCGATCAGGGTAAGGAGCGTCTGAATCGTCTGGGCTTCTTTGAAACTGTCGATACCGATACCCAACGTGTTCCGGGTAGCCCGGACCAGGTTGATGTCGTCTACAAGGTAAAAGAGCGCAACACCGGTAGCTTCAACTTTGGTATTGGTTACGGTACTGAAAGTGGCGTGAGCTTCCAGGCTGGTGTGCAGCAGGATAACTGGTTAGGTACAGGTTATGCTGTTGGTATCAACGGGACCAAAAACGATTACCAGACCTATGCTGAACTGTCGGTAACCAACCCGTACTTCACCGTAGATGGCGTAAGCCTCGGTGGTCGTCTCTTCTATAATGACTTCCAGGCAGATGACGCCGACCTGTCCGACTATACCAACAAGAGTTATGGTACAGACGTGACGTTGGGCTTCCCGATTAACGAATATAACTCGCTGCGTGCAGGTCTGGGTTATGTACATAACTCCCTGTCCAACATGCAGCCTCAGGTTGCGATGTGGCGTTATCTGTACTCTATGGGTGAACATCCGAGCACCTCTGATCAGGATAACAGCTTCAAAACGGACGACTTCACGTTCAACTATGGTTGGACCTATAACAAGCTTGACCGTGGTTACTTCCCGACAGATGGTTCACGTGTCAACCTGACCGGTAAAGTGACCATTCCTGGATCGGATAACGAATACTACAAAGTGACGTTAGACACGGCGACTTATGTGCCGATCGATGACGATCACAAATGGGTTGTTCTGGGGCGTACCCGCTGGGGTTATGGTGATGGTTTAGGCGGCAAAGAGATGCCGTTCTACGAGAACTTCTATGCCGGTGGTTCCAGCACCGTGCGTGGCTTCCAGTCCAATACCATTGGTCCGAAAGCAGTTTACTTCCCGCATCAGGCCAGTAATTATGATCCGGACTATGATTACGAATGTGCGACTCAGGACGGCGCGAAAGACCTGTGTAAATCGGATGATGCTGTAGGCGGTAACGCCATGGCGGTTGCCAGCCTCGAGTTCATCACCCCGACGCCGTTTATTAGCGATAAGTATGCTAACTCGGTTCGTACTTCCTTCTTCTGGGATATGGGTACCGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGTCCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAA", + "dna_sequence_length": 2433, + "functions": [ + "BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor" + ], + "id": "CDS_172", + "location": [ + [ + "NC_000913", + 197928, + "+", + 2433 + ] + ], + "md5": "b7ec1f74e820a874e31dade7b3006ab6", + "parent_gene": "", + "protein_md5": "a903fc4fe493421cba7148152cf5d580", + "protein_translation": "MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKTW", + "protein_translation_length": 810, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000608" + ], + [ + "gene_synonym", + "ECK0177" + ], + [ + "gene_synonym", + "EcoGene:EG10455" + ], + [ + "gene_synonym", + "GI:16128171" + ], + [ + "gene_synonym", + "GeneID:944861" + ], + [ + "gene_synonym", + "JW0173" + ], + [ + "gene_synonym", + "NP_414720.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEU7" + ], + [ + "gene_synonym", + "b0178" + ], + [ + "gene_synonym", + "hlpA" + ], + [ + "gene_synonym", + "ompH" + ], + [ + "gene_synonym", + "skp" + ] + ], + "dna_sequence": "GTGAAAAAGTGGTTATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGCAGGCTAAAATGAAAAAGCTGCAGTCCATGAAAGCGGGCAGCGATCGCACTAAGCTGGAAAAAGACGTGATGGCTCAGCGCCAGACTTTTGCTCAGAAAGCGCAGGCTTTTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGACATCACTGCCGACGTACTGAAACAGGTTAAATAA", + "dna_sequence_length": 486, + "functions": [ + "periplasmic chaperone" + ], + "id": "CDS_173", + "location": [ + [ + "NC_000913", + 200482, + "+", + 486 + ] + ], + "md5": "c49ca21f7ad66e22a4b3e0867717cffe", + "parent_gene": "", + "protein_md5": "bfaf87cb327c4863122f5b21037726d2", + "protein_translation": "MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000610" + ], + [ + "gene_synonym", + "ECK0178" + ], + [ + "gene_synonym", + "EcoGene:EG10316" + ], + [ + "gene_synonym", + "GI:16128172" + ], + [ + "gene_synonym", + "GeneID:944882" + ], + [ + "gene_synonym", + "JW0174" + ], + [ + "gene_synonym", + "NP_414721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21645" + ], + [ + "gene_synonym", + "b0179" + ], + [ + "gene_synonym", + "firA" + ], + [ + "gene_synonym", + "lpxD" + ], + [ + "gene_synonym", + "omsA" + ], + [ + "gene_synonym", + "ssc" + ] + ], + "dna_sequence": "ATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCACAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAACCAGTGCCAGATTGCACATAACGTCGTGATTGGCGACAATACGGCGGTTGCCGGTGGCGTCATTATGGCGGGCAGCCTGAAAATTGGTCGTTACTGCATGATCGGCGGAGCCAGCGTAATCAACGGGCATATGGAAATATGCGACAAAGTGACGGTTACGGGCATGGGTATGGTGATGCGTCCCATCACTGAACCAGGCGTCTATTCCTCAGGCATTCCGCTGCAACCCAACAAAGTCTGGCGCAAAACCGCTGCACTGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAA", + "dna_sequence_length": 1026, + "functions": [ + "UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase" + ], + "id": "CDS_174", + "location": [ + [ + "NC_000913", + 200971, + "+", + 1026 + ] + ], + "md5": "0b1bd380f826d8bf7d4966b458cb6090", + "parent_gene": "", + "protein_md5": "741fa666fa9fd650190bc1458057cfdf", + "protein_translation": "MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000613" + ], + [ + "gene_synonym", + "ECK0179" + ], + [ + "gene_synonym", + "EcoGene:EG11284" + ], + [ + "gene_synonym", + "GI:16128173" + ], + [ + "gene_synonym", + "GeneID:944888" + ], + [ + "gene_synonym", + "JW0175" + ], + [ + "gene_synonym", + "NP_414722.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Q6" + ], + [ + "gene_synonym", + "b0180" + ], + [ + "gene_synonym", + "fabZ" + ], + [ + "gene_synonym", + "sabA" + ], + [ + "gene_synonym", + "sefA" + ], + [ + "gene_synonym", + "sfhC" + ], + [ + "gene_synonym", + "yaeA" + ] + ], + "dna_sequence": "TTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGAAGAAGGTCGTTTTCTGCGCGCAGTAAAAAATGTCTCTGTCAATGAGCCATTCTTCCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGCGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCGAAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGATGTGTGCTCGTAGCCGGGAGGCCTGA", + "dna_sequence_length": 456, + "functions": [ + "(3R)-hydroxymyristol acyl carrier protein dehydratase" + ], + "id": "CDS_175", + "location": [ + [ + "NC_000913", + 202101, + "+", + 456 + ] + ], + "md5": "3e944e6749f12eecdee93beebd5d2843", + "parent_gene": "", + "protein_md5": "39c986b5fa4f42d99ad008fbdd2694fb", + "protein_translation": "MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000618" + ], + [ + "gene_synonym", + "ECK0180" + ], + [ + "gene_synonym", + "EcoGene:EG10545" + ], + [ + "gene_synonym", + "GI:16128174" + ], + [ + "gene_synonym", + "GeneID:944849" + ], + [ + "gene_synonym", + "JW0176" + ], + [ + "gene_synonym", + "NP_414723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A722" + ], + [ + "gene_synonym", + "b0181" + ], + [ + "gene_synonym", + "lpxA" + ] + ], + "dna_sequence": "GTGATTGATAAATCCGCCTTTGTGCATCCAACCGCCATTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAACCGCTGTATTCTCGCCAACAACGCAACGCTGGCGGGTCACGTATCGGTTGACGACTTCGCGATCATCGGCGGCATGACCGCAGTCCATCAGTTCTGCATCATTGGTGCGCACGTGATGGTTGGCGGCTGCTCCGGTGTGGCGCAGGACGTCCCTCCTTATGTCATTGCGCAGGGTAACCACGCAACGCCGTTCGGTGTCAATATCGAAGGGCTGAAGCGCCGCGGATTCAGCCGTGAGGCGATTACCGCTATCCGCAATGCGTATAAGCTGATTTATCGTAGCGGTAAAACGCTCGATGAAGTGAAACCGGAAATTGCTGAACTGGCGGAAACATATCCGGAAGTGAAAGCCTTTACCGATTTCTTTGCACGCTCAACGCGCGGTCTGATTCGTTAA", + "dna_sequence_length": 789, + "functions": [ + "UDP-N-acetylglucosamine acetyltransferase" + ], + "id": "CDS_176", + "location": [ + [ + "NC_000913", + 202560, + "+", + 789 + ] + ], + "md5": "1397f3023ed6a892ed85169d29c18896", + "parent_gene": "", + "protein_md5": "67d5473b2d87839eceb38dacbf198014", + "protein_translation": "MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000620" + ], + [ + "gene_synonym", + "ECK0181" + ], + [ + "gene_synonym", + "EcoGene:EG10546" + ], + [ + "gene_synonym", + "GI:16128175" + ], + [ + "gene_synonym", + "GeneID:944838" + ], + [ + "gene_synonym", + "JW0177" + ], + [ + "gene_synonym", + "NP_414724.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10441" + ], + [ + "gene_synonym", + "b0182" + ], + [ + "gene_synonym", + "lpxB" + ], + [ + "gene_synonym", + "pgsB" + ] + ], + "dna_sequence": "ATGACTGAACAGCGTCCATTAACGATTGCCCTGGTCGCCGGAGAAACCTCCGGCGATATCCTGGGGGCCGGTTTAATCCGCGCTCTGAAAGAACATGTGCCCAACGCCCGCTTTGTTGGTGTTGCCGGGCCACGAATGCAGGCTGAAGGCTGCGAAGCCTGGTACGAAATGGAAGAACTGGCGGTGATGGGCATTGTTGAAGTGCTCGGTCGTCTGCGTCGCTTACTGCATATTCGTGCCGATCTGACAAAGCGTTTTGGCGAACTGAAGCCAGATGTTTTTGTTGGTATTGATGCGCCTGACTTCAATATTACTCTTGAAGGTAACCTCAAAAAGCAGGGTATCAAAACCATTCATTACGTCAGTCCGTCAGTCTGGGCGTGGCGACAGAAACGTGTTTTCAAAATAGGCAGAGCCACCGATCTGGTGCTCGCATTTCTGCCTTTCGAAAAAGCGTTTTATGACAAATACAACGTACCGTGCCGCTTTATCGGTCATACCATGGCTGATGCCATGCCATTAGATCCAGATAAAAATGCCGCCCGTGATGTGCTGGGGATCCCTCACGATGCCCACTGCCTGGCGTTGCTACCGGGGAGCCGTGGTGCAGAAGTTGAAATGCTTAGTGCCGATTTCCTGAAAACGGCCCAGCTTTTGCGCCAGACATATCCGGATCTCGAAATCGTGGTGCCACTGGTGAATGCCAAACGCCGCGAGCAGTTTGAACGCATCAAAGCTGAAGTCGCGCCAGACCTTTCAGTTCATTTGCTGGATGGGATGGGCCGTGAGGCGATGGTCGCCAGCGATGCGGCGCTACTGGCGTCGGGTACGGCAGCCCTGGAGTGTATGCTGGCGAAATGCCCGATGGTGGTGGGATATCGCATGAAGCCTTTTACCTTCTGGTTGGCGAAGCGGCTGGTGAAAACTGATTATGTCTCGCTGCCAAATCTGCTGGCGGGCAGAGAGTTAGTCAAAGAATTATTGCAGGAAGAGTGTGAGCCGCAAAAACTGGCTGCGGCGCTGTTACCGCTGTTGGCGAACGGGAAAACCAGCCACGCGATGCACGATACCTTCCGTGAACTGCATCAGCAGATCCGCTGCAATGCCGATGAGCAGGCGGCACAAGCCGTTCTGGAGTTAGCACAATGA", + "dna_sequence_length": 1149, + "functions": [ + "tetraacyldisaccharide-1-P synthase" + ], + "id": "CDS_177", + "location": [ + [ + "NC_000913", + 203348, + "+", + 1149 + ] + ], + "md5": "69fd222445d2736323e712cc939b878b", + "parent_gene": "", + "protein_md5": "00529aad8c9fd81e045d4e1d8f4a6e2d", + "protein_translation": "MTEQRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGPRMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDFNITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLELAQ", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000622" + ], + [ + "gene_synonym", + "ECK0182" + ], + [ + "gene_synonym", + "EcoGene:EG10861" + ], + [ + "gene_synonym", + "GI:16128176" + ], + [ + "gene_synonym", + "GeneID:944852" + ], + [ + "gene_synonym", + "JW0178" + ], + [ + "gene_synonym", + "NP_414725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10442" + ], + [ + "gene_synonym", + "b0183" + ], + [ + "gene_synonym", + "rnhB" + ] + ], + "dna_sequence": "ATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGCCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGATCCTTGACCCGGCGCGCCCGATTGCCGGGCTGAATGATTCCAAAAAGCTGAGCGAAAAACGCCGTCTGGCGCTCTATGAAGAGATCAAAGAGAAAGCGTTGAGCTGGAGTCTGGGCCGCGCGGAACCCCACGAAATCGACGAGCTGAACATTCTTCATGCGACCATGCTGGCGATGCAGCGTGCCGTCGCTGGGCTGCATATTGCGCCGGAATATGTGTTGATTGATGGTAACCGCTGCCCGAAATTACCGATGCCTGCGATGGCTGTGGTGAAAGGCGATAGCCGCGTACCGGAAATCAGTGCCGCGTCTATCCTGGCGAAAGTGACGCGTGACGCCGAAATGGCGGCGCTGGATATTGTTTTCCCGCAATATGGTTTTGCCCAACACAAAGGGTACCCAACCGCTTTTCATCTGGAAAAACTGGCTGAACACGGCGCGACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGA", + "dna_sequence_length": 597, + "functions": [ + "ribonuclease HII, degrades RNA of DNA-RNA hybrids" + ], + "id": "CDS_178", + "location": [ + [ + "NC_000913", + 204493, + "+", + 597 + ] + ], + "md5": "a4a68e390e6c684477e52b635554c133", + "parent_gene": "", + "protein_md5": "d7a3a5e13c1c51387522d19a7825cf8f", + "protein_translation": "MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000624" + ], + [ + "gene_synonym", + "ECK0183" + ], + [ + "gene_synonym", + "EcoGene:EG10238" + ], + [ + "gene_synonym", + "GI:16128177" + ], + [ + "gene_synonym", + "GeneID:944877" + ], + [ + "gene_synonym", + "JW0179" + ], + [ + "gene_synonym", + "NP_414726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10443" + ], + [ + "gene_synonym", + "b0184" + ], + [ + "gene_synonym", + "dnaE" + ], + [ + "gene_synonym", + "polC" + ], + [ + "gene_synonym", + "sdgC" + ] + ], + "dna_sequence": "ATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGCGACTACTCGATGATCGATGGCCTGGCCAAAACCGCACCGTTGGTAAAAAAGGCGGCGGCGTTGGGTATGCCAGCACTGGCGATCACCGATTTCACCAACCTTTGTGGTCTGGTGAAGTTCTACGGAGCGGGACATGGCGCAGGGATTAAGCCTATCGTCGGGGCAGATTTTAACGTCCAGTGCGACCTGCTGGGTGATGAGTTAACCCACCTGACGGTACTGGCGGCGAACAATACCGGCTATCAGAATCTGACGTTGCTGATCTCAAAAGCGTATCAGCGCGGGTACGGTGCCGCCGGGCCGATCATCGATCGCGACTGGCTTATCGAATTAAACGAAGGGTTGATCCTTCTTTCCGGCGGACGCATGGGCGACGTCGGACGCAGTCTTTTGCGTGGTAACAGCGCGCTGGTAGATGAGTGTGTCGCGTTTTATGAAGAACACTTCCCGGATCGCTATTTTCTCGAGCTGATCCGCACCGGCAGGCCGGATGAAGAAAGCTATCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGACGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTGTAACGTAACCGTGCGTCTTGGTGAATACTTCCTGCCGCAGTTCCCGACCGGGGACATGAGCACCGAAGATTATCTGGTCAAGCGTGCAAAAGAGGGCCTGGAAGAGCGTCTGGCCTTTTTATTCCCTGATGAGGAAGAACGTCTTAAGCGCCGCCCGGAATATGACGAACGTCTGGAGACTGAACTTCAGGTTATCAACCAGATGGGCTTCCCGGGCTACTTCCTCATCGTTATGGAATTTATCCAGTGGTCGAAAGATAACGGCGTACCGGTAGGGCCAGGCCGTGGCTCCGGTGCGGGTTCACTGGTGGCCTACGCGCTGAAAATCACCGACCTCGATCCGCTGGAATTTGACCTGCTGTTCGAACGTTTCCTTAACCCGGAACGTGTCTCCATGCCTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGGCGCTGATCGACATGGCGCGCAAACTGGAAGGGGTCACCCGTAACGCCGGTAAGCACGCCGGTGGGGTGGTTATCGCGCCGACCAAAATTACCGATTTTGCGCCGCTTTACTGCGATGAAGAGGGCAAACATCCGGTCACCCAGTTTGATAAAAGCGACGTTGAATACGCCGGACTGGTGAAGTTCGACTTCCTTGGTTTGCGTACGCTCACCATCATCAACTGGGCGCTGGAGATGATCAACAAGCGGCGGGCGAAGAATGGCGAGCCGCCGCTGGATATCGCTGCGATCCCGCTGGATGATAAGAAAAGCTTCGACATGCTGCAACGCTCGGAAACCACGGCGGTATTCCAGCTTGAATCGCGCGGCATGAAGGACCTGATCAAGCGTCTACAACCTGACTGCTTCGAAGATATGATCGCCCTAGTGGCACTGTTCCGCCCCGGTCCGTTGCAATCAGGGATGGTGGATAACTTTATCGACCGTAAACATGGTCGTGAAGAGATCTCCTATCCGGACGTACAGTGGCAGCATGAAAGCCTGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGAAATCGTGTATGGTATTGGCGCGATCAAAGGGGTCGGTGAAGGTCCGATTGAGGCCATCATCGAAGCCCGTAATAAAGGCGGCTACTTCCGCGAACTGTTTGATCTCTGCGCCCGTACCGACACCAAAAAGTTGAACCGTCGCGTGCTGGAAAAACTGATCATGTCCGGGGCGTTTGACCGTCTTGGGCCACATCGCGCAGCGCTGATGAACTCGCTGGGCGATGCGTTAAAAGCGGCAGATCAACACGCGAAAGCGGAAGCTATCGGTCAGGCCGATATGTTCGGCGTGCTGGCCGAAGAGCCGGAACAAATTGAACAATCCTACGCCAGCTGCCAACCGTGGCCGGAGCAGGTGGTATTAGATGGGGAACGTGAAACGTTAGGCCTGTACCTGACCGGACACCCTATCAACCAGTATTTAAAAGAGATTGAGCGTTATGTCGGAGGCGTAAGGCTGAAAGACATGCACCCGACAGAACGTGGTAAAGTCATCACGGCTGCGGGGCTCGTTGTTGCCGCGCGGGTTATGGTCACCAAGCGCGGCAATCGTATCGGTATCTGCACGCTGGATGACCGTTCCGGGCGGCTGGAAGTGATGTTGTTTACTGACGCCCTGGATAAATACCAGCAATTGCTGGAAAAAGACCGCATACTTATCGTCAGCGGACAGGTCAGCTTTGATGACTTCAGCGGTGGGCTTAAAATGACCGCTCGCGAAGTGATGGATATTGACGAAGCCCGGGAAAAATATGCTCGCGGGCTTGCTATCTCGCTGACGGACAGGCAAATTGATGACCAGCTTTTAAACCGACTCCGTCAGTCTCTGGAACCCCACCGCTCTGGGACAATTCCAGTACATCTCTACTATCAGAGGGCGGATGCACGCGCGCGGTTGCGTTTTGGCGCGACGTGGCGTGTCTCTCCGAGCGATCGTTTATTAAACGATCTCCGTGGCCTCATTGGTTCGGAGCAGGTGGAACTGGAGTTTGACTAA", + "dna_sequence_length": 3483, + "functions": [ + "DNA polymerase III alpha subunit" + ], + "id": "CDS_179", + "location": [ + [ + "NC_000913", + 205126, + "+", + 3483 + ] + ], + "md5": "578826f32c443c0bb6fe0617bcacbb5e", + "parent_gene": "", + "protein_md5": "f950e4fc98ec91abd0b4b3ead1e6026b", + "protein_translation": "MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVELEFD", + "protein_translation_length": 1160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000630" + ], + [ + "gene_synonym", + "ECK0184" + ], + [ + "gene_synonym", + "EcoGene:EG11647" + ], + [ + "gene_synonym", + "GI:16128178" + ], + [ + "gene_synonym", + "GeneID:944895" + ], + [ + "gene_synonym", + "JW0180" + ], + [ + "gene_synonym", + "NP_414727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD5" + ], + [ + "gene_synonym", + "accA" + ], + [ + "gene_synonym", + "b0185" + ] + ], + "dna_sequence": "ATGAGTCTGAATTTCCTTGATTTTGAACAGCCGATTGCAGAGCTGGAAGCGAAAATCGATTCTCTGACTGCGGTTAGCCGTCAGGATGAGAAACTGGATATTAACATCGATGAAGAAGTGCATCGTCTGCGTGAAAAAAGCGTAGAACTGACACGTAAAATCTTCGCCGATCTCGGTGCATGGCAGATTGCGCAACTGGCACGCCATCCACAGCGTCCTTATACCCTGGATTACGTTCGCCTGGCATTTGATGAATTTGACGAACTGGCTGGCGACCGCGCGTATGCAGACGATAAAGCTATCGTCGGTGGTATCGCCCGTCTCGATGGTCGTCCGGTGATGATCATTGGTCATCAAAAAGGTCGTGAAACCAAAGAAAAAATTCGCCGTAACTTTGGTATGCCAGCGCCAGAAGGTTACCGCAAAGCACTGCGTCTGATGCAAATGGCTGAACGCTTTAAGATGCCTATCATCACCTTTATCGACACCCCGGGGGCTTATCCTGGCGTGGGCGCAGAAGAGCGTGGTCAGTCTGAAGCCATTGCACGCAACCTGCGTGAAATGTCTCGCCTCGGCGTACCGGTAGTTTGTACGGTTATCGGTGAAGGTGGTTCTGGCGGTGCGCTGGCGATTGGCGTGGGCGATAAAGTGAATATGCTGCAATACAGCACCTATTCCGTTATCTCGCCGGAAGGTTGTGCGTCCATTCTGTGGAAGAGCGCCGACAAAGCGCCGCTGGCGGCTGAAGCGATGGGTATCATTGCTCCGCGTCTGAAAGAACTGAAACTGATCGACTCCATCATCCCGGAACCACTGGGTGGTGCTCACCGTAACCCGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAA", + "dna_sequence_length": 960, + "functions": [ + "acetyl-CoA carboxylase, carboxytransferase, alpha subunit" + ], + "id": "CDS_180", + "location": [ + [ + "NC_000913", + 208621, + "+", + 960 + ] + ], + "md5": "9fbafbfda38c934d6046e213ee86ecee", + "parent_gene": "", + "protein_md5": "ecad122ea2e955a8f798d20bffccbf20", + "protein_translation": "MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000633" + ], + [ + "gene_synonym", + "ECK0185" + ], + [ + "gene_synonym", + "EcoGene:EG13219" + ], + [ + "gene_synonym", + "GI:16128179" + ], + [ + "gene_synonym", + "GeneID:944887" + ], + [ + "gene_synonym", + "JW0181" + ], + [ + "gene_synonym", + "LDC2" + ], + [ + "gene_synonym", + "NP_414728.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52095" + ], + [ + "gene_synonym", + "b0186" + ], + [ + "gene_synonym", + "ldc" + ], + [ + "gene_synonym", + "ldcC" + ], + [ + "gene_synonym", + "ldcH" + ] + ], + "dna_sequence": "ATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCAAAGAACTGGAGTCGGCGCTGGTGGCGCAAGGCTTTCAGATTATCTGGCCACAAAACAGCGTTGATTTGCTGAAATTTATCGAGCATAACCCTCGAATTTGCGGCGTGATTTTTGACTGGGATGAGTACAGTCTCGATTTATGTAGCGATATCAATCAGCTTAATGAATATCTCCCGCTTTATGCCTTCATCAACACCCACTCGACGATGGATGTCAGCGTGCAGGATATGCGGATGGCGCTCTGGTTTTTTGAATATGCGCTGGGGCAGGCGGAAGATATCGCCATTCGTATGCGTCAGTACACCGACGAATATCTTGATAACATTACACCGCCGTTCACGAAAGCCTTGTTTACCTACGTCAAAGAGCGGAAGTACACCTTTTGTACGCCGGGGCATATGGGCGGCACCGCATATCAAAAAAGCCCGGTTGGCTGTCTGTTTTATGATTTTTTCGGCGGGAATACTCTTAAGGCTGATGTCTCTATTTCGGTCACCGAGCTTGGTTCGTTGCTCGACCACACCGGGCCACACCTGGAAGCGGAAGAGTACATCGCGCGGACTTTTGGCGCGGAACAGAGTTATATCGTTACCAACGGAACATCGACGTCGAACAAAATTGTGGGTATGTACGCCGCGCCATCCGGCAGTACGCTGTTGATCGACCGCAATTGTCATAAATCGCTGGCGCATCTGTTGATGATGAACGATGTAGTGCCAGTCTGGCTGAAACCGACGCGTAATGCGTTGGGGATTCTTGGTGGGATCCCGCGCCGTGAATTTACTCGCGACAGCATCGAAGAGAAAGTCGCTGCTACCACGCAAGCACAATGGCCGGTTCATGCGGTGATCACCAACTCCACCTATGATGGCTTGCTCTACAACACCGACTGGATCAAACAGACGCTGGATGTCCCGTCGATTCACTTCGATTCTGCCTGGGTGCCGTACACCCATTTTCATCCGATCTACCAGGGTAAAAGTGGTATGAGCGGCGAGCGTGTTGCGGGAAAAGTGATCTTCGAAACGCAATCGACCCACAAAATGCTGGCGGCGTTATCGCAGGCTTCGCTGATCCACATTAAAGGCGAGTATGACGAAGAGGCCTTTAACGAAGCCTTTATGATGCATACCACCACCTCGCCCAGTTATCCCATTGTTGCTTCGGTTGAGACGGCGGCGGCGATGCTGCGTGGTAATCCGGGCAAACGGCTGATTAACCGTTCAGTAGAACGAGCTCTGCATTTTCGCAAAGAGGTCCAGCGGCTGCGGGAAGAGTCTGACGGTTGGTTTTTCGATATCTGGCAACCGCCGCAGGTGGATGAAGCCGAATGCTGGCCCGTTGCGCCTGGCGAACAGTGGCACGGCTTTAACGATGCGGATGCCGATCATATGTTTCTCGATCCGGTTAAAGTCACTATTTTGACACCGGGGATGGACGAGCAGGGCAATATGAGCGAGGAGGGGATCCCGGCGGCGCTGGTAGCAAAATTCCTCGACGAACGTGGGATCGTAGTAGAGAAAACCGGCCCTTATAACCTGCTGTTTCTCTTTAGTATTGGCATCGATAAAACCAAAGCAATGGGATTATTGCGTGGGTTGACGGAATTCAAACGCTCTTACGATCTCAACCTGCGGATCAAAAATATGCTACCCGATCTCTATGCAGAAGATCCCGATTTCTACCGCAATATGCGTATTCAGGATCTGGCACAAGGGATCCATAAGCTGATTCGTAAACACGATCTTCCCGGTTTGATGTTGCGGGCATTCGATACTTTGCCGGAGATGATCATGACGCCACATCAGGCATGGCAACGACAAATTAAAGGCGAAGTAGAAACCATTGCGCTGGAACAACTGGTCGGTAGAGTATCGGCAAATATGATCCTGCCTTATCCACCGGGCGTACCGCTGTTGATGCCTGGAGAAATGCTGACCAAAGAGAGCCGCACAGTACTCGATTTTCTACTGATGCTTTGTTCCGTCGGGCAACATTACCCCGGTTTTGAAACGGATATTCACGGCGCGAAACAGGACGAAGACGGCGTTTACCGCGTACGAGTCCTAAAAATGGCGGGATAA", + "dna_sequence_length": 2142, + "functions": [ + "lysine decarboxylase 2, constitutive" + ], + "id": "CDS_181", + "location": [ + [ + "NC_000913", + 209679, + "+", + 2142 + ] + ], + "md5": "2a47e6b0fc7c713f1782939e6098af6d", + "parent_gene": "", + "protein_md5": "38161fdde05e685426cddf9bec774f52", + "protein_translation": "MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG", + "protein_translation_length": 713, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000635" + ], + [ + "gene_synonym", + "ECK0186" + ], + [ + "gene_synonym", + "EcoGene:EG13224" + ], + [ + "gene_synonym", + "GI:90111096" + ], + [ + "gene_synonym", + "GeneID:944875" + ], + [ + "gene_synonym", + "JW0182" + ], + [ + "gene_synonym", + "NP_414729.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52096" + ], + [ + "gene_synonym", + "b0187" + ], + [ + "gene_synonym", + "yaeR" + ] + ], + "dna_sequence": "ATGCTGGGTTTAAAACAGGTTCACCATATTGCGATTATTGCGACGGATTATGCGGTGAGCAAAGCTTTCTACTGCGATATTCTTGGTTTCACGCTGCAAAGCGAAGTCTATCGCGAAGCGCGCGACTCATGGAAAGGGGATTTGGCGCTTAATGGGCAATATGTGATTGAGCTTTTCTCATTTCCGTTCCCGCCGGAACGACCCAGCCGACCGGAAGCTTGCGGTCTGCGTCATCTGGCTTTTAGCGTTGATGACATCGATGCGGCAGTGGCGCACCTTGAAAGCCATAACGTGAAGTGTGAAACCATCCGTGTCGATCCATACACGCAAAAACGCTTCACCTTCTTTAACGATCCGGACGGGCTGCCGTTGGAACTGTATGAGCAGTAA", + "dna_sequence_length": 390, + "functions": [ + "putative lyase" + ], + "id": "CDS_182", + "location": [ + [ + "NC_000913", + 211877, + "+", + 390 + ] + ], + "md5": "0dfca0b72589d7917f4e6bd71c1bd194", + "parent_gene": "", + "protein_md5": "4b1e42e2cf1af9aa6558949461a02c9d", + "protein_translation": "MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDGLPLELYEQ", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000638" + ], + [ + "gene_synonym", + "ECK0187" + ], + [ + "gene_synonym", + "EcoGene:EG13220" + ], + [ + "gene_synonym", + "GI:16128181" + ], + [ + "gene_synonym", + "GeneID:944889" + ], + [ + "gene_synonym", + "JW0183" + ], + [ + "gene_synonym", + "NP_414730.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52097" + ], + [ + "gene_synonym", + "b0188" + ], + [ + "gene_synonym", + "mesJ" + ], + [ + "gene_synonym", + "tilS" + ], + [ + "gene_synonym", + "yaeN" + ] + ], + "dna_sequence": "ATGACACTCACGCTCAATAGACAACTTCTCACCTCACGCCAGATTCTGGTGGCCTTTAGCGGCGGGCTTGACTCCACCGTTCTGCTGCATCAGTTGGTGCAGTGGCGGACGGAAAATCCGGGTGTCGCTCTGCGCGCTATTCATGTGCATCACGGTTTAAGTGCCAATGCCGATGCCTGGGTTACGCATTGCGAAAACGTCTGCCAACAGTGGCAGGTGCCGCTGGTGGTCGAACGCGTACAACTTGCGCAAGAAGGACTGGGCATTGAGGCCCAGGCGCGGCAGGCACGTTATCAGGCATTTGCCCGCACCTTGTTGCCCGGTGAAGTGCTGGTCACCGCGCAACATCTCGACGATCAATGTGAAACCTTTCTGCTGGCGCTAAAACGCGGCAGTGGCCCTGCCGGGCTTTCGGCTATGGCGGAAGTCTCGGAGTTTGCCGGAACGCGGCTTATTCGCCCGTTGCTCGCCCGCACGCGGGGGGAACTGGTGCAGTGGGCGCGTCAGTATGATTTACGCTGGATTGAAGACGAAAGTAATCAGGACGACTCATACGATCGTAACTTTCTGCGCCTGCGCGTAGTGCCGTTATTGCAGCAGCGTTGGCCGCATTTTGCCGAAGCAACGGCCCGCAGCGCCGCACTTTGTGCTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAA", + "dna_sequence_length": 1299, + "functions": [ + "tRNA(Ile)-lysidine synthetase" + ], + "id": "CDS_183", + "location": [ + [ + "NC_000913", + 212331, + "+", + 1299 + ] + ], + "md5": "9669b6092dc369c1076f128c0173a880", + "parent_gene": "", + "protein_md5": "7e96182a6a7bd0ee063ff97c2ae41716", + "protein_translation": "MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPAGLGSVQLNAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000641" + ], + [ + "gene_synonym", + "ECK0188" + ], + [ + "gene_synonym", + "EcoGene:EG13221" + ], + [ + "gene_synonym", + "GI:90111097" + ], + [ + "gene_synonym", + "GeneID:944891" + ], + [ + "gene_synonym", + "JW0184" + ], + [ + "gene_synonym", + "NP_414731.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFW8" + ], + [ + "gene_synonym", + "b0189" + ], + [ + "gene_synonym", + "mesJ" + ], + [ + "gene_synonym", + "rof" + ], + [ + "gene_synonym", + "yaeO" + ] + ], + "dna_sequence": "ATGAATGATACGTATCAACCAATCAATTGTGATGATTACGATAATCTTGAGCTCGCCTGCCAGCATCATTTAATGCTGACACTTGAGCTGAAAGATGGCGAAAAATTGCAGGCAAAAGCCAGTGATTTAGTCTCCCGCAAAAATGTGGAGTACCTGGTCGTCGAGGCCGCTGGCGAAACCCGCGAGCTGCGTCTGGATAAAATTACCAGCTTTAGCCACCCGGAAATCGGTACGGTGGTGGTAAGCGAATCCTGA", + "dna_sequence_length": 255, + "functions": [ + "modulator of Rho-dependent transcription termination" + ], + "id": "CDS_184", + "location": [ + [ + "NC_000913", + 213932, + "-", + 255 + ] + ], + "md5": "6de21caf08154416df4ceed43738ac71", + "parent_gene": "", + "protein_md5": "9cb665f7074f000617fa722ab8ef0030", + "protein_translation": "MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047214" + ], + [ + "gene_synonym", + "ECK0189" + ], + [ + "gene_synonym", + "EcoGene:EG13222" + ], + [ + "gene_synonym", + "GI:49176004" + ], + [ + "gene_synonym", + "GeneID:1450233" + ], + [ + "gene_synonym", + "JW0185" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8K5" + ], + [ + "gene_synonym", + "YP_026160.1" + ], + [ + "gene_synonym", + "b4406" + ], + [ + "gene_synonym", + "yaeP" + ] + ], + "dna_sequence": "GTGGAAAAATATTGTGAGTTAATACGCAAGCGGTACGCGGAAATCGCCAGCGGAGACTTAGGATACGTTCCGGACGCGCTGGGCTGCGTTTTGAAAGTGCTGAATGAAATGGCTGCCGACGACGCCCTTTCTGAGGCTGTCAGGGAAAAAGCAGCATACGCTGCGGCAAACTTACTGGTGAGCGATTATGTCAATGAATGA", + "dna_sequence_length": 201, + "functions": [ + "UPF0253 family protein" + ], + "id": "CDS_185", + "location": [ + [ + "NC_000913", + 214125, + "-", + 201 + ] + ], + "md5": "58396699c7fd4041cd510c719fa4578e", + "parent_gene": "", + "protein_md5": "16a4e396bea42fb2f83c8e0d157eaa1d", + "protein_translation": "MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALSEAVREKAAYAAANLLVSDYVNE", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000648" + ], + [ + "gene_synonym", + "ECK0190" + ], + [ + "gene_synonym", + "EcoGene:EG13223" + ], + [ + "gene_synonym", + "GI:16128183" + ], + [ + "gene_synonym", + "GeneID:946809" + ], + [ + "gene_synonym", + "JW0186" + ], + [ + "gene_synonym", + "NP_414732.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA97" + ], + [ + "gene_synonym", + "b0190" + ], + [ + "gene_synonym", + "yaeQ" + ] + ], + "dna_sequence": "ATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACCAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGATGATGAGCCGGAAGCGTGGCTGCGTAACGATCACCTGGGCATTGATTTGTGGATTGAGCTGGGGCTGCCGGATGAGCGGCGGATTAAGAAAGCCTGCACCCAGGCCGCAGAAGTGGCGCTGTTTACCTATAATAGTCGGGCGGCGCAAATCTGGTGGCAGCAAAATCAGAGCAAATGTGTGCAGTTTGCCAATCTTTCCGTCTGGTATCTGGACGATGAACAACTGGCGAAAGTAAGCGCCTTTGCCGATCGTACCATGACGCTGCAGGCAACGATTCAGGATGGCGTGATCTGGTTATCGGATGATAAGAATAATCTGGAAGTGAACTTAACCGCCTGGCAACAACCTTCATGA", + "dna_sequence_length": 546, + "functions": [ + "PDDEXK superfamily protein" + ], + "id": "CDS_186", + "location": [ + [ + "NC_000913", + 214291, + "+", + 546 + ] + ], + "md5": "2c9f0348ede84579f4354cec96f207c4", + "parent_gene": "", + "protein_md5": "5c5cbe2cf9268e395b232384268c3254", + "protein_translation": "MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000650" + ], + [ + "gene_synonym", + "ECK0191" + ], + [ + "gene_synonym", + "EcoGene:EG12354" + ], + [ + "gene_synonym", + "GI:16128184" + ], + [ + "gene_synonym", + "GeneID:946046" + ], + [ + "gene_synonym", + "JW0187" + ], + [ + "gene_synonym", + "NP_414733.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40711" + ], + [ + "gene_synonym", + "arfB" + ], + [ + "gene_synonym", + "b0191" + ], + [ + "gene_synonym", + "yaeJ" + ] + ], + "dna_sequence": "ATGATTGTGATTTCCCGACATGTTGCTATTCCCGATGGTGAGCTTGAGATCACCGCCATTCGTGCGCAGGGCGCGGGCGGGCAGCATGTTAATAAGACCTCAACGGCTATTCATCTGCGTTTTGACATTCGGGCGTCCAGCCTGCCAGAGTATTACAAAGAGCGTCTGCTCGCCGCCAGCCATCATTTGATCAGCAGTGATGGCGTGATTGTCATTAAGGCACAGGAATACCGCAGTCAGGAACTGAACCGCGAAGCAGCTCTGGCCCGGCTGGTGGCTATGATTAAAGAATTAACAACAGAAAAAAAAGCCCGACGACCCACGCGGCCCACCCGTGCATCGAAAGAGCGCAGGCTGGCATCGAAAGCACAAAAATCAAGCGTGAAGGCGATGCGCGGCAAAGTGCGCAGCGGTCGGGAATAA", + "dna_sequence_length": 423, + "functions": [ + "alternative stalled-ribosome rescue factor B", + "peptidyl-tRNA hydrolase, ribosome-attached" + ], + "id": "CDS_187", + "location": [ + [ + "NC_000913", + 214833, + "+", + 423 + ] + ], + "md5": "b71ea4a689dc65a357336e3d83902666", + "parent_gene": "", + "protein_md5": "bf929418f511765a3781435504d335f2", + "protein_translation": "MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEKKARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000652" + ], + [ + "gene_synonym", + "ECK0192" + ], + [ + "gene_synonym", + "EcoGene:EG12137" + ], + [ + "gene_synonym", + "GI:16128185" + ], + [ + "gene_synonym", + "GeneID:946782" + ], + [ + "gene_synonym", + "JW0188" + ], + [ + "gene_synonym", + "NP_414734.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40710" + ], + [ + "gene_synonym", + "b0192" + ], + [ + "gene_synonym", + "cutF" + ], + [ + "gene_synonym", + "nlpE" + ] + ], + "dna_sequence": "ATGGTGAAAAAAGCGATAGTGACAGCGATGGCTGTAATCAGCCTCTTTACTCTGATGGGATGTAATAATCGGGCCGAAGTCGATACGCTTTCTCCGGCGCAGGCTGCCGAACTGAAACCGATGCCGCAAAGTTGGCGCGGCGTGCTGCCGTGTGCCGATTGCGAAGGAATCGAAACCTCTCTGTTCCTCGAAAAAGACGGAACATGGGTGATGAATGAGCGTTATCTCGGTGCTCGTGAAGAACCTTCCTCCTTCGCTTCCTACGGTACATGGGCGCGAACCGCTGACAAGCTGGTATTAACCGACAGCAAAGGTGAAAAGTCATATTATCGGGCGAAAGGCGATGCGCTGGAGATGCTCGATCGTGAAGGCAATCCGATTGAATCGCAGTTCAACTATACGCTGGAAGCGGCACAATCCAGTTTACCTATGACGCCGATGACCCTGCGGGGCATGTATTTTTATATGGCTGATGCGGCGACCTTCACTGATTGCGCGACCGGAAAACGTTTCATGGTAGCGAATAACGCAGAGCTGGAGCGTAGCTACCTGGCTGCGCGCGGTCACAGTGAAAAACCGGTGTTACTGTCAGTAGAAGGTCACTTTACGCTTGAGGGTAATCCGGATACCGGTGCGCCGACTAAAGTATTGGCACCCGATACGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAA", + "dna_sequence_length": 711, + "functions": [ + "lipoprotein involved with copper homeostasis and adhesion" + ], + "id": "CDS_188", + "location": [ + [ + "NC_000913", + 215269, + "+", + 711 + ] + ], + "md5": "a5d55ea98f2299eebfe3caf1011791ff", + "parent_gene": "", + "protein_md5": "840a02f89b25b531d46615add518a845", + "protein_translation": "MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000655" + ], + [ + "gene_synonym", + "ECK0193" + ], + [ + "gene_synonym", + "EcoGene:EG12138" + ], + [ + "gene_synonym", + "GI:90111098" + ], + [ + "gene_synonym", + "GeneID:944892" + ], + [ + "gene_synonym", + "JW5016" + ], + [ + "gene_synonym", + "NP_414735.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37056" + ], + [ + "gene_synonym", + "b0193" + ], + [ + "gene_synonym", + "yaeF" + ], + [ + "gene_synonym", + "yaeK" + ] + ], + "dna_sequence": "ATGGATAAACCAAAGGCGTACTGCCGCCTGTTTCTCCCCAGCTTTCTTTTACTTTCGGCTTGTACCGTTGATATCAGCCAGCCAGACCCATCAGCCACAGCAGTAGATGCCGAGGCAAAAACATGGGCTGTCAAATTCCAGCATCAAAGCTCTTTCACCGAACAATCAATAAAAGAAATAACGGCACCTGATCTCAAACCCGGCGATTTGCTGTTCTCCTCAAGCCTTGGGGTAACCTCATTTGGAATCCGCGTCTTCAGCACTTCCTCTGTGAGTCACGTTGCAATCTTTCTGGGTGATAATAACGTTGCAGAAGCGACAGGCGCTGGCGTCCAGATCGTTTCCCTTAAAAAAGCGATGAAGCATAGTGATAAGCTTTTCGTCTTACGAGTCCCGGATCTTACCCCGCAACAAGCCACAGATATCACCGCGTTTGCCAATAAAATCAAAGATAGCGGTTATAACTATCGCGGCATTGTCGAATTTATTCCCTTTATGGTGACTCGCCAGATGTGCTCACTGAATCCGTTCTCCGAGGATTTTCGCCAACAGTGCGTCAGCGGCCTGGCGAAAGCGCAGTTAAGCAGTGTGGGCGAAGGAGACAAAAAGTCGTGGTTTTGTTCGGAATTTGTCACGGATGCCTTTGCCAAAGCCGGGCATCCACTTACACTGGCGCAATCGGGCTGGATTAGCCCTGCCGATCTGATGCATATGCGTATTGGTGATGTCTCTGCGTTTAAGCCAGAAACGCAGTTACAGTATGTTGGGCACCTGAAGCCTGGGATTTATATCAAGGCGGGTCGCTTTGTTGGTTTGACCCGGTGA", + "dna_sequence_length": 825, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_189", + "location": [ + [ + "NC_000913", + 217003, + "-", + 825 + ] + ], + "md5": "ed4c32243e85e005f832a1d34633d3fd", + "parent_gene": "", + "protein_md5": "588dc07f7ce71f9209577d865d92b1ca", + "protein_translation": "MDKPKAYCRLFLPSFLLLSACTVDISQPDPSATAVDAEAKTWAVKFQHQSSFTEQSIKEITAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNNVAEATGAGVQIVSLKKAMKHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIVEFIPFMVTRQMCSLNPFSEDFRQQCVSGLAKAQLSSVGEGDKKSWFCSEFVTDAFAKAGHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVGHLKPGIYIKAGRFVGLTR", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000657" + ], + [ + "gene_synonym", + "ECK0194" + ], + [ + "gene_synonym", + "EcoGene:EG10770" + ], + [ + "gene_synonym", + "GI:16128187" + ], + [ + "gene_synonym", + "GeneID:949116" + ], + [ + "gene_synonym", + "JW0190" + ], + [ + "gene_synonym", + "NP_414736.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16659" + ], + [ + "gene_synonym", + "b0194" + ], + [ + "gene_synonym", + "drpA" + ], + [ + "gene_synonym", + "proS" + ] + ], + "dna_sequence": "ATGCGTACTAGCCAATACCTGCTCTCCACTCTCAAGGAGACACCTGCCGACGCCGAGGTGATCAGCCATCAGCTGATGCTGCGCGCCGGGATGATCCGCAAGCTGGCCTCCGGGTTATATACCTGGCTGCCGACCGGCGTGCGCGTTCTGAAAAAAGTCGAAAACATCGTGCGTGAAGAGATGAACAACGCCGGTGCGATCGAGGTGTCGATGCCGGTGGTTCAGCCAGCCGATTTGTGGCAAGAGAGTGGTCGTTGGGAACAGTACGGTCCGGAACTGCTGCGTTTTGTTGACCGTGGCGAGCGTCCGTTCGTACTCGGCCCAACTCATGAAGAAGTTATCACTGACCTGATTCGTAACGAGCTTAGCTCTTACAAACAGCTGCCGCTGAACTTCTATCAGATCCAGACCAAGTTCCGCGACGAAGTGCGTCCGCGTTTCGGCGTCATGCGTTCCCGCGAATTCCTGATGAAAGATGCTTACTCTTTCCATACTTCTCAGGAATCCCTGCAGGAAACCTACGATGCAATGTATGCGGCCTACAGCAAAATCTTCAGCCGCATGGGGCTGGATTTCCGCGCCGTACAAGCCGACACCGGTTCTATCGGCGGCAGCGCCTCTCACGAATTCCAGGTGCTGGCGCAGAGCGGTGAAGACGATGTGGTCTTCTCCGACACCTCTGACTATGCAGCGAACATTGAACTGGCAGAAGCTATCGCGCCGAAAGAACCGCGCGCTGCTGCTACCCAGGAAATGACGCTGGTTGATACGCCGAACGCGAAAACCATCGCGGAACTGGTTGAACAGTTCAATCTGCCGATTGAGAAAACGGTTAAGACTCTGCTGGTTAAAGCGGTTGAAGGCAGCAGCTTCCCGCAGGTTGCGCTGCTGGTGCGCGGTGATCACGAGCTGAACGAAGTTAAAGCAGAAAAACTGCCGCAGGTTGCAAGCCCGCTGACTTTCGCGACCGAAGAAGAAATTCGTGCCGTGGTTAAAGCCGGTCCGGGTTCACTGGGTCCGGTAAACATGCCGATTCCGGTGGTGATTGACCGTACCGTTGCGGCGATGAGTGATTTCGCTGCTGGTGCTAACATCGATGGTAAACACTACTTCGGCATCAACTGGGATCGCGATGTCGCTACCCCGGAAGTTGCAGATATCCGTAACGTGGTGGCTGGCGATCCAAGCCCGGATGGCCAGGGTAGGCTGCTGATCAAACGTGGTATCGAAGTTGGTCACATCTTCCAGCTGGGTACCAAGTACTCCGAAGCACTGAAAGCCTCCGTACAGGGTGAAGATGGCCGTAACCAAATCCTGACGATGGGTTGCTACGGTATCGGGGTAACGCGTGTGGTAGCTGCGGCGATTGAGCAGAACTACGACGAACGAGGCATCGTATGGCCTGACGCTATCGCGCCGTTCCAGGTGGCGATTCTGCCGATGAACATGCACAAATCCTTCCGCGTACAAGAGCTTGCTGAGAAACTGTACAGCGAACTGCGTGCACAAGGTATCGAAGTGCTGCTGGATGACCGCAAAGAGCGTCCGGGCGTGATGTTTGCTGATATGGAACTGATCGGTATTCCGCACACTATTGTGCTGGGCGACCGTAACCTCGACAACGACGATATCGAATATAAATATCGTCGCAACGGCGAGAAACAGTTAATTAAGACTGGTGACATCGTCGAATATCTGGTGAAACAGATTAAAGGCTGA", + "dna_sequence_length": 1719, + "functions": [ + "prolyl-tRNA synthetase" + ], + "id": "CDS_190", + "location": [ + [ + "NC_000913", + 218775, + "-", + 1719 + ] + ], + "md5": "59fa20ef03c8e95c7b2e74227ee6a8a4", + "parent_gene": "", + "protein_md5": "9bfb277b5f3ada9171524f312c6fb860", + "protein_translation": "MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIKG", + "protein_translation_length": 572, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000661" + ], + [ + "gene_synonym", + "ECK0195" + ], + [ + "gene_synonym", + "EcoGene:EG11503" + ], + [ + "gene_synonym", + "GI:16128188" + ], + [ + "gene_synonym", + "GeneID:949112" + ], + [ + "gene_synonym", + "JW0191" + ], + [ + "gene_synonym", + "NP_414737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28634" + ], + [ + "gene_synonym", + "b0195" + ], + [ + "gene_synonym", + "tsaA" + ], + [ + "gene_synonym", + "yaeB" + ] + ], + "dna_sequence": "ATGAGCAGTTTCCAGTTCGAGCAAATAGGCGTTATTCGCTCGCCCTATAAAGAAAAGTTCGCCGTTCCGCGCCAGCCAGGTCTGGTAAAAAGCGCCAACGGCGAACTGCATCTCATTGCTCCCTACAACCAGGCCGACGCCGTTCGCGGCCTGGAAGCGTTCAGCCATTTATGGATCCTTTTCGTCTTTCATCAAACGATGGAAGGCGGCTGGCGTCCGACTGTGCGTCCACCGCGCCTCGGCGGTAACGCCAGAATGGGGGTTTTCGCAACACGCTCTACTTTCCGCCCTAACCCAATTGGCATGTCGCTGGTAGAGCTGAAAGAGGTTGTTTGCCATAAAGACAGCGTGATTCTGAAGCTCGGCAGTCTGGATCTGGTCGATGGTACGCCGGTAGTGGATATCAAACCGTATCTCCCCTTTGCCGAATCGCTTCCCGATGCCAGTGCCAGCTATGCGCAAAGTGCGCCAGCTGCAGAGATGGCGGTGAGTTTTACCGCAGAGGTCGAAAAGCAGCTTTTGACGCTGGAGAAGCGTTATCCGCAGTTAACGCTGTTTATCCGCGAAGTACTGGCGCAGGACCCGCGCCCGGCCTATCGTAAAGGTGAGGAAACGGGCAAAACCTATGCCGTCTGGCTACATGATTTTAACGTTCGCTGGCGCGTCACCGACGCAGGTTTTGAAGTCTTTGCGCTGGAACCGCGTTAA", + "dna_sequence_length": 708, + "functions": [ + "tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent" + ], + "id": "CDS_191", + "location": [ + [ + "NC_000913", + 219594, + "-", + 708 + ] + ], + "md5": "44978ca36fb242b415338960bdd0d366", + "parent_gene": "", + "protein_md5": "7362a2591a895bf47e3333890b401d15", + "protein_translation": "MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000663" + ], + [ + "gene_synonym", + "ECK0196" + ], + [ + "gene_synonym", + "EcoGene:EG11502" + ], + [ + "gene_synonym", + "GI:16128189" + ], + [ + "gene_synonym", + "GeneID:949113" + ], + [ + "gene_synonym", + "JW0192" + ], + [ + "gene_synonym", + "NP_414738.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69411" + ], + [ + "gene_synonym", + "b0196" + ], + [ + "gene_synonym", + "rcsF" + ] + ], + "dna_sequence": "ATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGTCGAACCCGTTCAAAGCACTGCACCCCAGCCGAAAGCGGAGCCTGCAAAACCGAAAGCGCCGCGCGCCACGCCGGTCCGAATTTATACCAATGCAGAAGAATTAGTCGGCAAACCGTTCCGCGATCTCGGTGAAGTCAGTGGCGACTCTTGCCAGGCCTCTAATCAGGACTCTCCGCCGAGCATTCCAACCGCACGTAAGCGGATGCAAATCAACGCCTCTAAAATGAAAGCCAATGCTGTATTACTGCATAGCTGCGAAGTCACCAGCGGTACGCCAGGCTGCTATCGTCAGGCTGTATGTATCGGTTCTGCGCTTAACATTACGGCGAAATGA", + "dna_sequence_length": 405, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_192", + "location": [ + [ + "NC_000913", + 219995, + "-", + 405 + ] + ], + "md5": "5b6470713f646080f71e2895e2a5ed48", + "parent_gene": "", + "protein_md5": "0ea44a49b70285717a7432533a30b5a1", + "protein_translation": "MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYRQAVCIGSALNITAK", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000666" + ], + [ + "gene_synonym", + "ECK0197" + ], + [ + "gene_synonym", + "EcoGene:EG11504" + ], + [ + "gene_synonym", + "GI:16128190" + ], + [ + "gene_synonym", + "GeneID:944893" + ], + [ + "gene_synonym", + "JW0193" + ], + [ + "gene_synonym", + "NP_414739.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28635" + ], + [ + "gene_synonym", + "b0197" + ], + [ + "gene_synonym", + "metD" + ], + [ + "gene_synonym", + "metQ" + ], + [ + "gene_synonym", + "yaeC" + ] + ], + "dna_sequence": "ATGGCGTTCAAATTCAAAACCTTTGCGGCAGTGGGAGCCCTGATCGGATCACTGGCACTGGTAGGCTGCGGTCAGGATGAAAAAGATCCAAACCACATTAAAGTCGGCGTGATTGTTGGTGCCGAACAGCAGGTTGCAGAAGTCGCGCAGAAAGTTGCGAAAGACAAATATGGCCTGGACGTTGAGCTGGTAACCTTCAACGACTATGTTCTGCCAAACGAAGCATTGAGCAAAGGCGATATCGACGCCAACGCCTTCCAGCATAAACCGTACCTTGATCAGCAACTGAAAGATCGTGGCTACAAACTGGTCGCAGTAGGCAACACTTTTGTTTATCCGATTGCTGGTTACTCCAAGAAAATCAAATCACTGGATGAACTGCAGGATGGTTCGCAGGTTGCCGTGCCAAACGACCCAACTAACCTTGGTCGTTCACTGCTGCTGCTGCAAAAAGTGGGCTTGATCAAACTGAAAGATGGCGTTGGCCTGCTGCCGACCGTTCTTGATGTTGTTGAGAACCCCAAAAATCTGAAAATTGTTGAACTGGAAGCACCGCAACTGCCGCGTTCTCTGGACGACGCGCAAATCGCTCTGGCAGTTATCAATACCACCTATGCCAGCCAGATTGGCCTGACTCCGGCGAAAGACGGTATCTTTGTTGAAGATAAAGAGTCCCCGTACGTAAACCTGATCGTGACGCGTGAAGATAACAAAGACGCCGAGAACGTGAAGAAATTCGTCCAGGCTTATCAGTCTGACGAAGTTTACGAAGCAGCAAACAAAGTGTTTAACGGCGGAGCTGTTAAAGGCTGGTAA", + "dna_sequence_length": 816, + "functions": [ + "DL-methionine transporter subunit" + ], + "id": "CDS_193", + "location": [ + [ + "NC_000913", + 220928, + "-", + 816 + ] + ], + "md5": "e7d787291b3bb1c3efe9b58a772256c0", + "parent_gene": "", + "protein_md5": "28a7814aeb6b097d83e34aff5982e20b", + "protein_translation": "MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000668" + ], + [ + "gene_synonym", + "ECK0198" + ], + [ + "gene_synonym", + "EcoGene:EG11737" + ], + [ + "gene_synonym", + "GI:16128191" + ], + [ + "gene_synonym", + "GeneID:944894" + ], + [ + "gene_synonym", + "JW0194" + ], + [ + "gene_synonym", + "NP_414740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31547" + ], + [ + "gene_synonym", + "b0198" + ], + [ + "gene_synonym", + "metD" + ], + [ + "gene_synonym", + "metI" + ], + [ + "gene_synonym", + "yaeE" + ] + ], + "dna_sequence": "ATGTCTGAGCCGATGATGTGGCTGCTGGTTCGTGGCGTATGGGAAACGCTGGCAATGACCTTCGTATCCGGTTTTTTTGGCTTTGTGATTGGTCTGCCGGTTGGCGTTCTGCTTTATGTCACGCGTCCGGGGCAAATTATTGCTAACGCGAAGCTGTATCGTACCGTTTCTGCGATTGTGAACATTTTCCGTTCCATCCCGTTCATTATCTTGCTTGTATGGATGATTCCGTTTACCCGCGTTATTGTCGGTACATCGATTGGTTTGCAGGCAGCGATTGTTCCGTTAACCGTTGGTGCAGCACCGTTTATTGCCCGTATGGTCGAGAACGCTCTGCTGGAGATCCCAACCGGGTTAATTGAAGCTTCCCGCGCAATGGGTGCCACGCCGATGCAGATCGTCCGTAAGGTGCTGTTACCGGAAGCGCTGCCGGGTCTGGTGAATGCGGCAACTATCACCCTGATTACCCTGGTCGGTTATTCCGCGATGGGTGGTGCAGTCGGTGCCGGTGGTTTAGGTCAGATTGGCTATCAGTATGGCTACATCGGCTATAACGCGACGGTGATGAATACGGTACTGGTATTGCTGGTCATTCTGGTTTATTTAATTCAGTTCGCAGGCGACCGCATCGTCCGGGCTGTCACTCGCAAGTAA", + "dna_sequence_length": 654, + "functions": [ + "DL-methionine transporter subunit" + ], + "id": "CDS_194", + "location": [ + [ + "NC_000913", + 221621, + "-", + 654 + ] + ], + "md5": "1802f8755fc0752ce187f56d26b82316", + "parent_gene": "", + "protein_md5": "8cc05077228007da2d3a7bf7635361b4", + "protein_translation": "MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000671" + ], + [ + "gene_synonym", + "ECK0199" + ], + [ + "gene_synonym", + "EcoGene:EG11621" + ], + [ + "gene_synonym", + "GI:16128192" + ], + [ + "gene_synonym", + "GeneID:944896" + ], + [ + "gene_synonym", + "JW0195" + ], + [ + "gene_synonym", + "NP_414741.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30750" + ], + [ + "gene_synonym", + "abc" + ], + [ + "gene_synonym", + "b0199" + ], + [ + "gene_synonym", + "metD" + ], + [ + "gene_synonym", + "metN" + ] + ], + "dna_sequence": "ATGATAAAACTTTCGAATATCACCAAAGTGTTCCACCAGGGCACCCGCACCATCCAGGCGTTGAACAACGTCAGCCTGCATGTGCCAGCTGGACAAATTTATGGCGTTATCGGTGCCTCAGGCGCGGGTAAGAGTACGCTTATACGTTGTGTAAACCTGCTGGAGCGCCCAACCGAGGGTAGCGTGCTGGTCGATGGCCAGGAACTGACCACGCTGTCAGAATCCGAGTTGACCAAAGCTCGCCGCCAGATTGGTATGATTTTCCAGCATTTTAACCTGCTCTCTTCGCGTACTGTTTTTGGCAACGTGGCTCTGCCGCTGGAGCTGGACAACACACCGAAAGACGAGGTCAAACGTCGCGTGACGGAATTGCTGTCATTGGTTGGTCTTGGCGATAAGCATGATAGCTACCCGTCGAATCTTTCCGGTGGGCAGAAACAACGTGTGGCAATTGCCCGTGCGTTAGCCAGCAATCCCAAAGTATTGCTGTGTGATGAAGCCACCAGCGCGCTGGACCCGGCAACGACACGTTCTATTCTCGAACTGCTGAAAGACATCAACCGCCGTCTGGGGTTGACGATTCTGTTGATCACCCACGAAATGGACGTTGTGAAGCGCATTTGTGATTGCGTGGCGGTCATCAGCAATGGAGAACTGATCGAGCAGGACACGGTAAGTGAAGTGTTCTCGCATCCGAAAACGCCGCTGGCGCAGAAGTTTATTCAGTCGACCCTGCATCTGGATATCCCGGAAGATTACCAGGAACGTCTGCAAGCGGAGCCATTTACTGACTGCGTGCCGATGCTGCGTCTGGAGTTTACCGGTCAATCGGTCGATGCCCCACTGCTTTCTGAAACCGCGCGTCGTTTCAACGTCAACAACAACATTATTAGCGCGCAGATGGATTACGCCGGTGGCGTTAAGTTCGGCATCATGCTGACTGAAATGCACGGCACACAACAAGATACGCAAGCCGCCATTGCCTGGCTGCAGGAACACCATGTAAAAGTAGAGGTACTGGGTTATGTCTGA", + "dna_sequence_length": 1032, + "functions": [ + "DL-methionine transporter subunit" + ], + "id": "CDS_195", + "location": [ + [ + "NC_000913", + 222645, + "-", + 1032 + ] + ], + "md5": "100f612663a3d51b4e05e71a588a9b3d", + "parent_gene": "", + "protein_md5": "6bf499b0ed2a55a20573294c362eec36", + "protein_translation": "MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGYV", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000675" + ], + [ + "gene_synonym", + "ECK0200" + ], + [ + "gene_synonym", + "EcoGene:EG11736" + ], + [ + "gene_synonym", + "GI:16128193" + ], + [ + "gene_synonym", + "GeneID:944879" + ], + [ + "gene_synonym", + "JW0196" + ], + [ + "gene_synonym", + "NP_414742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63228" + ], + [ + "gene_synonym", + "b0200" + ], + [ + "gene_synonym", + "gmbC" + ], + [ + "gene_synonym", + "gmbX" + ], + [ + "gene_synonym", + "gmhB" + ], + [ + "gene_synonym", + "gmhX" + ], + [ + "gene_synonym", + "wcbN" + ], + [ + "gene_synonym", + "yaeD" + ] + ], + "dna_sequence": "GTGGCGAAGAGCGTACCCGCAATTTTTCTTGACCGTGATGGCACCATTAATGTCGATCACGGCTATGTCCATGAGATCGACAACTTTGAATTTATCGACGGTGTTATTGACGCCATGCGCGAGCTAAAAAAAATGGGCTTTGCGCTGGTGGTAGTAACCAACCAGTCTGGCATTGCTCGCGGTAAATTTACCGAAGCACAGTTTGAAACGCTGACCGAGTGGATGGACTGGTCGCTGGCGGACCGAGATGTCGATCTGGATGGTATCTATTATTGCCCGCATCATCCGCAGGGTAGTGTTGAAGAGTTTCGCCAGGTCTGCGATTGCCGCAAACCACATCCGGGGATGCTTTTGTCAGCACGCGATTATTTGCATATTGATATGGCCGCTTCTTATATGGTGGGCGATAAATTAGAAGATATGCAGGCAGCGGTTGCGGCGAACGTGGGAACAAAAGTGCTGGTGCGTACGGGTAAACCTATTACGCCTGAAGCAGAAAACGCGGCGGATTGGGTGTTAAATAGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGA", + "dna_sequence_length": 576, + "functions": [ + "D,D-heptose 1,7-bisphosphate phosphatase" + ], + "id": "CDS_196", + "location": [ + [ + "NC_000913", + 222833, + "+", + 576 + ] + ], + "md5": "7c2495adda8d845ef6d77d2c51973aeb", + "parent_gene": "", + "protein_md5": "034879e842467f417452367367849a0f", + "protein_translation": "MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKKQQKPAQ", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000692" + ], + [ + "gene_synonym", + "ECK0207" + ], + [ + "gene_synonym", + "EcoGene:EG11648" + ], + [ + "gene_synonym", + "GI:16128194" + ], + [ + "gene_synonym", + "GeneID:944901" + ], + [ + "gene_synonym", + "JW0197" + ], + [ + "gene_synonym", + "NP_414743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30863" + ], + [ + "gene_synonym", + "b0207" + ], + [ + "gene_synonym", + "dkgB" + ], + [ + "gene_synonym", + "yafB" + ] + ], + "dna_sequence": "ATGGCTATCCCTGCATTTGGTTTAGGTACTTTCCGTCTGAAAGACGACGTTGTTATTTCATCTGTGATAACGGCGCTTGAACTTGGTTATCGCGCAATTGATACCGCACAAATCTATGATAACGAAGCCGCAGTAGGTCAGGCGATTGCAGAAAGTGGCGTGCCACGTCATGAACTCTACATCACCACTAAAATCTGGATTGAAAATCTCAGCAAAGACAAATTGATCCCAAGTCTGAAAGAGAGCCTGCAAAAATTGCGTACCGATTATGTTGATCTGACGCTAATCCACTGGCCGTCACCAAACGATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCACGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGTTGCCTGGGCTAAACAGCACGGCATCCATATTACTTCCTATATGACGCTGGCGTATGGTAAGGCCCTGAAAGATGAGGTTATTGCTCGTATCGCAGCTAAACACAATGCGACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTTGATGCCGAAGATAAAAAAGCGATCGCCGCACTGGATTGCAACGACCGCCTGGTTAGCCCGGAAGGTCTGGCTCCTGAATGGGATTAA", + "dna_sequence_length": 804, + "functions": [ + "2,5-diketo-D-gluconate reductase B" + ], + "id": "CDS_197", + "location": [ + [ + "NC_000913", + 229167, + "+", + 804 + ] + ], + "md5": "17b239251732e24d58068a689f3b3820", + "parent_gene": "", + "protein_md5": "42d497419a55e8f85fbbf0897fb40734", + "protein_translation": "MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000694" + ], + [ + "gene_synonym", + "ECK0208" + ], + [ + "gene_synonym", + "EcoGene:EG11649" + ], + [ + "gene_synonym", + "GI:16128195" + ], + [ + "gene_synonym", + "GeneID:947507" + ], + [ + "gene_synonym", + "JW0198" + ], + [ + "gene_synonym", + "NP_414744.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30864" + ], + [ + "gene_synonym", + "b0208" + ], + [ + "gene_synonym", + "yafC" + ] + ], + "dna_sequence": "ATGAAAGCCACGTCGGAAGAACTCGCCATTTTTGTTTCGGTCGTCGAAAGCGGCAGCTTTAGCCGGGCAGCGGAACAATTAGGGCAAGCAAACTCAGCGGTAAGCCGGGCGGTGAAAAAGCTGGAGATGAAACTTGGCGTTAGCCTGCTTAATCGGACCACGCGACAACTTAGCCTGACGGAAGAAGGCGAGCGTTATTTTCGTCGCGTACAGTCAATTTTGCAGGAGATGGCAGCGGCAGAATCAGAAATTATGGAGACGCGTAATACACCGCGTGGACTGTTACGGATCGATGCCGCAACTCCAGTGGTGCTGCACTTTCTGATGCCGTTAATTAAGCCTTTCCGTGAACGCTATCCGGAAGTCACTTTGTCGCTAGTCTCCTCCGAAACGATTATTAATTTGATCGAAAGAAAAGTGGATGTCGCGATACGCGCTGGTACGTTAACGGATTCCAGCTTACGTGCCAGGCCGTTATTTAACAGTTATCGAAAAATTATCGCCTCCCCCGATTATATTTCCCGCTACGGGAAGCCAGAAACGATCGACGATTTAAAGCAACATATTTGCCTGGGATTCACTGAACCCGCTTCCCTCAATACCTGGCCGATAGCCCGTAGCGATGGACAATTACATGAGGTGAAGTACGGTTTGTCATCCAATAGTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAAGAAATCGCTCGCGGAGAATTGGTGGAGTTAATGGCAGATAAAGTGTTGCCAGTGGAAATGCCATTCAGTGCCGTCTATTACAGCGACCGTGCGGTAAGTACGCGCATCCGGGCTTTTATCGATTTCCTTAGCGAGCATGTAAAAACAGCTCCCGGAGGAGCTGTCAGAGAGGCTTAA", + "dna_sequence_length": 915, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_198", + "location": [ + [ + "NC_000913", + 230881, + "-", + 915 + ] + ], + "md5": "a497a86de1c920266157016b35f4242a", + "parent_gene": "", + "protein_md5": "0890b81dcd477ce27b91f0297845e1f0", + "protein_translation": "MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTAPGGAVREA", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000700" + ], + [ + "gene_synonym", + "ECK0209" + ], + [ + "gene_synonym", + "EcoGene:EG11650" + ], + [ + "gene_synonym", + "GI:16128196" + ], + [ + "gene_synonym", + "GeneID:946286" + ], + [ + "gene_synonym", + "JW5017" + ], + [ + "gene_synonym", + "NP_414745.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8U2" + ], + [ + "gene_synonym", + "b0209" + ], + [ + "gene_synonym", + "yafD" + ] + ], + "dna_sequence": "GTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCACATCTGGTGTTATTGCAGGAAGCGCAGACAACGCCAGAGTTAGTACAGTTTGCGACCGCTAACTATCTTGCCGCCGATCAGGTACCCGCTTTCGTGCTGCCACAACATCCTTCTGGCGTAATGACCCTTTCGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGTGGATGTCTATAGTAAGCAGTTACTTCCTATTGGCGATCAGATAGCTCACCACAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACCGATGATCAGCGCCGTCGGGCGTTTGGTCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGTGAAGCTTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAA", + "dna_sequence_length": 801, + "functions": [ + "endo/exonuclease/phosphatase family protein" + ], + "id": "CDS_199", + "location": [ + [ + "NC_000913", + 231122, + "+", + 801 + ] + ], + "md5": "df7a4940ebf617251767c842c3b63738", + "parent_gene": "", + "protein_md5": "12612a887d60eca1ae67919be49d5007", + "protein_translation": "MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERIRILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTDDQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000702" + ], + [ + "gene_synonym", + "ECK0210" + ], + [ + "gene_synonym", + "EcoGene:EG11651" + ], + [ + "gene_synonym", + "GI:16128197" + ], + [ + "gene_synonym", + "GeneID:946197" + ], + [ + "gene_synonym", + "JW0200" + ], + [ + "gene_synonym", + "NP_414746.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30866" + ], + [ + "gene_synonym", + "b0210" + ], + [ + "gene_synonym", + "yafE" + ] + ], + "dna_sequence": "ATGTCAGGTCTGCCACAGGGCAGACCAACGTTTGGCGCTGCGCAAAACGTGAGCGCGGTGGTGGCGTATGACTTATCTGCCCACATGCTGGATGTCGTGGCACAAGCTGCCGAAGCCCGGCAACTGAAAAATATCACCACCCGCCAGGGATATGCCGAAAGTCTGCCATTTGCCGATAACGCATTTGATATTGTTATCAGCCGTTATTCTGCCCATCACTGGCATGATGTTGGTGCAGCACTGCGAGAAGTGAATAGGATATTGAAACCTGGCGGTAGGCTGATTGTGATGGACGTAATGTCTCCGGGTCACCCAGTGCGCGACATCTGGTTACAGACGGTAGAAGCATTACGCGATACCTCTCACGTACGAAACTACGCCAGCGGTGAGTGGTTGACGTTAATCAATGAAGCCAATCTGATAGTTGATAATTTAATTACAGATAAGTTACCGCTGGAATTTTCTTCATGGGTCGCGAGAATGCGTACGCCAGAAGCGTTAGTAGACGCTATTCGCATTTACCAACAGAGCGCATCGACAGAGGTGAGAACGTATTTTGCCTTGCAGAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAA", + "dna_sequence_length": 624, + "functions": [ + "putative S-adenosyl-L-methionine-dependent methyltransferase" + ], + "id": "CDS_200", + "location": [ + [ + "NC_000913", + 231926, + "+", + 624 + ] + ], + "md5": "bc57be6a327d51261f60c9f97da05d2c", + "parent_gene": "", + "protein_md5": "388cadc258c740e3d963af8bf6f1291d", + "protein_translation": "MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQNDGFFTSDIIMVDAHKAA", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000704" + ], + [ + "gene_synonym", + "ECK0211" + ], + [ + "gene_synonym", + "EcoGene:EG10246" + ], + [ + "gene_synonym", + "GI:16128198" + ], + [ + "gene_synonym", + "GeneID:945694" + ], + [ + "gene_synonym", + "JW5018" + ], + [ + "gene_synonym", + "NP_414747.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEZ7" + ], + [ + "gene_synonym", + "b0211" + ], + [ + "gene_synonym", + "dniR" + ], + [ + "gene_synonym", + "mltD" + ], + [ + "gene_synonym", + "yafG" + ] + ], + "dna_sequence": "ATGAAGGCAAAAGCGATATTACTCGCCTCTGTCCTGCTCGTGGGTTGCCAGAGTACCGGCAACGTTCAACAGCACGCACAGAGCCTTTCTGCAGCTGGTCAAGGGGAAGCAGCAAAGTTTACAAGTCAGGCACGATGGATGGACGATGGGACGTCTATCGCGCCAGATGGTGACTTGTGGGCTTTCATTGGCGACGAGCTAAAGATGGGAATTCCGGAAAATGACCGGATTCGCGAACAGAAACAGAAATATTTACGCAATAAGAGCTATCTCCACGATGTAACTTTACGGGCAGAGCCGTATATGTACTGGATAGCAGGGCAAGTTAAAAAACGTAACATGCCTATGGAACTGGTACTACTACCCATAGTGGAGAGCGCTTTTGATCCTCACGCAACGTCTGGCGCCAATGCCGCAGGCATCTGGCAGATCATTCCGAGCACGGGGCGCAATTATGGTTTGAAACAGACCCGCAATTATGACGCGCGTCGCGATGTTGTTGCTTCAACAACTGCCGCGCTGAATATGATGCAGCGTCTGAACAAAATGTTTGACGGCGACTGGCTTCTGACCGTAGCGGCTTATAACAGCGGCGAAGGTCGGGTCATGAAGGCAATTAAAACGAACAAAGCGCGTGGGAAATCCACGGACTTCTGGTCGTTACCGTTGCCGCAGGAAACGAAGCAGTACGTGCCTAAAATGCTGGCATTGAGTGATATTCTCAAAAACAGCAAGCGTTATGGCGTACGTCTGCCAACGACCGATGAAAGCCGTGCTCTGGCGCGTGTGCACCTGAGCAGCCCGGTTGAAATGGCGAAGGTAGCAGATATGGCGGGGATTTCCGTCAGCAAGCTGAAGACATTCAACGCTGGCGTAAAAGGCTCCACGCTGGGCGCAAGTGGCCCGCAGTACGTGATGGTGCCAAAGAAGCATGCAGATCAACTGCGTGAATCTCTGGCTTCAGGCGAAATTGCTGCTGTACAGTCGACGCTGGTTGCCGACAATACGCCGCTTAACAGCCGTGTTTACACCGTACGCTCTGGCGACACGCTTTCAAGTATCGCTTCACGTCTCGGCGTAAGCACCAAAGATTTGCAGCAGTGGAACAAACTGCGCGGATCTAAGCTGAAGCCAGGCCAAAGTTTGACGATTGGTGCAGGCAGTAGCGCACAGCGACTGGCAAACAACAGCGATAGCATTACGTATCGTGTGCGCAAAGGCGATTCGCTTTCAAGCATTGCTAAACGCCACGGCGTGAACATCAAAGATGTGATGCGCTGGAACAGCGACACTGCGAATCTGCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGA", + "dna_sequence_length": 1359, + "functions": [ + "putative membrane-bound lytic murein transglycosylase D" + ], + "id": "CDS_201", + "location": [ + [ + "NC_000913", + 233955, + "-", + 1359 + ] + ], + "md5": "028cec0584f5d418e2250f272e60eebe", + "parent_gene": "", + "protein_md5": "4c991d24375147672387b8f55871976f", + "protein_translation": "MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000707" + ], + [ + "gene_synonym", + "ECK0212" + ], + [ + "gene_synonym", + "EcoGene:EG13330" + ], + [ + "gene_synonym", + "GI:16128199" + ], + [ + "gene_synonym", + "GeneID:944902" + ], + [ + "gene_synonym", + "JW0202" + ], + [ + "gene_synonym", + "NP_414748.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC84" + ], + [ + "gene_synonym", + "b0212" + ], + [ + "gene_synonym", + "gloB" + ], + [ + "gene_synonym", + "yafR" + ] + ], + "dna_sequence": "ATGAATCTTAACAGTATTCCCGCCTTTGATGACAATTACATCTGGGTTTTGAATGATGAAGCAGGTCGCTGCCTGATTGTCGATCCCGGAGACGCAGAGCCAGTATTAAACGCCATTGCCGCCAATAACTGGCAACCGGAGGCCATATTTCTCACCCACCATCACCACGATCACGTTGGCGGCGTAAAAGAACTGGTGGAAAAGTTTCCACAAATTGTGGTGTATGGTCCACAAGAGACACAAGATAAGGGAACAACACAGGTAGTCAAAGATGGCGAAACTGCCTTCGTTTTGGGGCATGAATTTAGTGTAATTGCTACGCCGGGTCACACTTTAGGACATATCTGTTACTTCAGTAAACCTTATCTATTTTGCGGCGACACACTGTTTTCTGGTGGGTGTGGTCGGTTGTTTGAAGGGACAGCATCACAAATGTATCAATCACTTAAAAAGTTAAGTGCGTTACCTGACGATACATTGGTATGTTGTGCTCATGAATATACCTTATCAAATATGAAGTTTGCTTTGAGTATTCTTCCGCACGATTTGTCCATAAATGATTATTATCGTAAAGTTAAGGAGTTACGGGCAAAAAATCAAATAACACTACCCGTAATTCTGAAAAATGAGCGGCAAATTAATGTTTTTTTAAGAACGGAAGATATTGATTTAATTAATGTAATTAATGAAGAAACATTATTGCAACAACCTGAAGAGCGTTTTGCATGGTTAAGGTCAAAGAAAGATAGGTTCTGA", + "dna_sequence_length": 756, + "functions": [ + "hydroxyacylglutathione hydrolase" + ], + "id": "CDS_202", + "location": [ + [ + "NC_000913", + 234782, + "-", + 756 + ] + ], + "md5": "1980b39937e514e3f7efa7c8fee84c7e", + "parent_gene": "", + "protein_md5": "90398da652d9ee65dd85822ddeabcda5", + "protein_translation": "MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEERFAWLRSKKDRF", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000713" + ], + [ + "gene_synonym", + "ECK0213" + ], + [ + "gene_synonym", + "EcoGene:EG13331" + ], + [ + "gene_synonym", + "GI:90111099" + ], + [ + "gene_synonym", + "GeneID:944903" + ], + [ + "gene_synonym", + "JW0203" + ], + [ + "gene_synonym", + "NP_414749.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75672" + ], + [ + "gene_synonym", + "b0213" + ], + [ + "gene_synonym", + "yafS" + ] + ], + "dna_sequence": "ATGAAACCGGCAAGAGTCCCTCAAACTGTCGTGGCTCCTGATTGCTGGGGCGATTTGCCCTGGGGAAAGCTTTATCGCAAGGCGCTGGAGCGCCAGCTCAACCCGTGGTTCACTAAAATGTATGGTTTTCATCTGCTTAAGATTGGCAATTTAAGCGCAGAAATCAATTGCGAAGCGTGCGCGGTTTCTCATCAAGTGAATGTTTCTGCGCAAGGAATGCCCGTCCAGGTACAGGCGGACCCACTTCATCTTCCTTTTGCCGATAAATCCGTTGATGTTTGTCTACTGGCACATACATTGCCGTGGTGCACCGATCCGCATCGTTTATTGCGTGAAGCCGATCGGGTATTGATTGATGATGGCTGGCTGGTCATTAGTGGCTTCAATCCCATCAGTTTTATGGGATTACGCAAACTTGTGCCGGTATTGCGCAAAACCTCGCCCTATAACAGCCGGATGTTTACTCTGATGCGGCAGCTGGACTGGCTCTCTTTGTTGAATTTTGAAGTGCTACACGCCAGCCGTTTCCACGTTCTCCCGTGGAACAAACACGGAGGAAAACTATTGAATGCGCATATTCCTGCGCTTGGTTGCTTACAACTTATTGTTGCCCGGAAACGGACTATTCCTTTAACGCTAAATCCGATGAAACAGAGTAAAAACAAGCCACGAATTCGCCAGGCGGTTGGAGCCACCCGGCAATGTCGTAAACCACAGGCTTAA", + "dna_sequence_length": 723, + "functions": [ + "putative S-adenosyl-L-methionine-dependent methyltransferase" + ], + "id": "CDS_203", + "location": [ + [ + "NC_000913", + 234816, + "+", + 723 + ] + ], + "md5": "ae59ceb4288e043c46854cdc2a929cd5", + "parent_gene": "", + "protein_md5": "60afec669214c402822c446e607cb6a8", + "protein_translation": "MKPARVPQTVVAPDCWGDLPWGKLYRKALERQLNPWFTKMYGFHLLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMFTLMRQLDWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQSKNKPRIRQAVGATRQCRKPQA", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000717" + ], + [ + "gene_synonym", + "ECK0214" + ], + [ + "gene_synonym", + "EcoGene:EG10860" + ], + [ + "gene_synonym", + "GI:16128201" + ], + [ + "gene_synonym", + "GeneID:946955" + ], + [ + "gene_synonym", + "JW0204" + ], + [ + "gene_synonym", + "NP_414750.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Y4" + ], + [ + "gene_synonym", + "b0214" + ], + [ + "gene_synonym", + "cer" + ], + [ + "gene_synonym", + "dasF" + ], + [ + "gene_synonym", + "herA" + ], + [ + "gene_synonym", + "rnh" + ], + [ + "gene_synonym", + "rnhA" + ], + [ + "gene_synonym", + "sdrA" + ], + [ + "gene_synonym", + "sin" + ] + ], + "dna_sequence": "ATGCTTAAACAGGTAGAAATTTTCACCGATGGTTCGTGTCTGGGCAATCCAGGACCTGGGGGTTACGGCGCTATTTTACGCTATCGCGGACGCGAGAAAACCTTTAGCGCTGGCTACACCCGCACCACCAACAACCGTATGGAGTTGATGGCCGCTATTGTCGCGCTGGAGGCGTTAAAAGAACATTGCGAAGTCATTTTGAGTACCGACAGCCAGTATGTCCGCCAGGGTATCACCCAGTGGATCCATAACTGGAAAAAACGTGGCTGGAAAACCGCAGACAAAAAACCAGTAAAAAATGTCGATCTCTGGCAACGTCTTGATGCTGCATTGGGGCAGCATCAAATCAAATGGGAATGGGTTAAAGGCCATGCCGGACACCCGGAAAACGAACGCTGTGATGAACTGGCTCGTGCCGCGGCGATGAATCCCACACTGGAAGATACAGGCTACCAAGTTGAAGTTTAA", + "dna_sequence_length": 468, + "functions": [ + "ribonuclease HI, degrades RNA of DNA-RNA hybrids" + ], + "id": "CDS_204", + "location": [ + [ + "NC_000913", + 236002, + "-", + 468 + ] + ], + "md5": "45b958d1c9b138f117432897564f1890", + "parent_gene": "", + "protein_md5": "baa389b877a7f741a38376cf573ddbda", + "protein_translation": "MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000722" + ], + [ + "gene_synonym", + "ECK0215" + ], + [ + "gene_synonym", + "EcoGene:EG10243" + ], + [ + "gene_synonym", + "GI:16128202" + ], + [ + "gene_synonym", + "GeneID:946441" + ], + [ + "gene_synonym", + "JW0205" + ], + [ + "gene_synonym", + "NP_414751.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03007" + ], + [ + "gene_synonym", + "b0215" + ], + [ + "gene_synonym", + "dnaQ" + ], + [ + "gene_synonym", + "mutD" + ] + ], + "dna_sequence": "ATGAGCACTGCAATTACACGCCAGATCGTTCTCGATACCGAAACCACCGGTATGAACCAGATTGGTGCGCACTATGAAGGCCACAAGATCATTGAGATTGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGATCCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGCGAGGAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTGGCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGCAACAATTCAGCGCATTGTACGTCAGGCAAGTAAGTTACGCGTTGTTTTTGCGACAGATGAAGAGATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA", + "dna_sequence_length": 732, + "functions": [ + "DNA polymerase III epsilon subunit" + ], + "id": "CDS_205", + "location": [ + [ + "NC_000913", + 236067, + "+", + 732 + ] + ], + "md5": "ff9d5f51de261d59ef5d46d2fe3e3ab3", + "parent_gene": "", + "protein_md5": "eb05d01e354a7e3cee855e6993898b71", + "protein_translation": "MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEEIAAHEARLDLVQKKGGSCLWRA", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000727" + ], + [ + "gene_synonym", + "ECK0217" + ], + [ + "gene_synonym", + "EcoGene:EG13332" + ], + [ + "gene_synonym", + "GI:16128203" + ], + [ + "gene_synonym", + "GeneID:949009" + ], + [ + "gene_synonym", + "JW0206" + ], + [ + "gene_synonym", + "NP_414752.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77339" + ], + [ + "gene_synonym", + "b0217" + ], + [ + "gene_synonym", + "yafT" + ] + ], + "dna_sequence": "ATGAATTCAAAAAAGCTTTGTTGCATATGTGTGTTATTCTCGCTGCTTGCAGGATGTGCCTCTGAATCTTCTATTGATGAAAAGAAGAAAAAAGCTCAAGTCACACAAAGTAATATTAATAAAAACACTCCCCAGCAACTGACAGACAAAGATTTATTCGGTAATGAAACCACTCTGGCCGTATCCGAAGAGGATATTCAAGCTGCGCTTGATGGAGATGAGTTCCGCGTTCCCCTTAATTCTCCTGTAATACTTGTTCAATCCGGCAACCGCGCACCGGAAACCATTATGCAGGAGGAGATGCGAAAATATTATACTGTTTCCACATTCTCTGGTATCCCGGACAGGCAAAAGCCTCTGACTTGTAACAAAAACAAAGATAAAAATGAGAACGAGGATGTTGCCAGTGCTGAGAATATGAACTGGATGCAGGCACTGCGTTTTGTGGCTGCAAAAGGACATCAGAAAGCGATTATTGTTTACCAGGATATGTTGCAGACAGGAAAATATGACTCTGCGCTGAAATCAACAGTATGGTCCGACTATAAAAATGACAAACTCACTGACGCTATCTCCCTGCGCTACCTGGTACGTTTCACGCTGGTGGATGTGGCAACAGGTGAGTGGGCTACCTGGTCGCCGGTGAATTATGAATATAAAGTGCTTCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAA", + "dna_sequence_length": 786, + "functions": [ + "lipoprotein" + ], + "id": "CDS_206", + "location": [ + [ + "NC_000913", + 237335, + "+", + 786 + ] + ], + "md5": "3d9ce0d1ae120cce97d62fe75254b3ee", + "parent_gene": "", + "protein_md5": "3ea30f2b0baa586562a330dd1e4e03ff", + "protein_translation": "MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4397" + ], + [ + "gene_synonym", + "EcoGene:EG14451" + ], + [ + "gene_synonym", + "GI:145698220" + ], + [ + "gene_synonym", + "GeneID:5061498" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A605" + ], + [ + "gene_synonym", + "YP_001165307.1" + ], + [ + "gene_synonym", + "b4586" + ], + [ + "gene_synonym", + "ykfM" + ] + ], + "dna_sequence": "ATGCGTTTACATGTTAAATTAAAAGAGTTTCTTTCGATGTTTTTTATGGCCATATTATTTTTCCCTGCATTCAATGCTTCTTTGTTTTTTACCGGAGTTAAACCTCTATATTCAATAATAAAATGCTCCACGGAAATATTTTATGATTGGAGAATGTTGATTCTGTGCTTCGGTTTCATGTCGTTTTCCTTTTTAAATATTCATGTAATTTTACTTACGATAATAAAATCATTCTTAATCAAAAAAACGAAGGTAGTCAATTTCGCCACAGACATAACAATACAGCTAACTCTTATATTTTTACTAATAGCTATCGTAATAGCACCTTTAATAGCTCCTTTTGTCACAGGATATGTCAATACTAATTATCACCCCTGCGGTAATAATACGGGAATTTTCCCAGGAGCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAA", + "dna_sequence_length": 480, + "functions": [ + "lethality reduction protein, putative inner membrane protein" + ], + "id": "CDS_207", + "location": [ + [ + "NC_000913", + 238736, + "-", + 480 + ] + ], + "md5": "b1e38142e92ff1a65104d3535da96e3d", + "parent_gene": "", + "protein_md5": "203b6e42434430fb1985fedd77b1ef43", + "protein_translation": "MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000729" + ], + [ + "gene_synonym", + "ECK0218" + ], + [ + "gene_synonym", + "EcoGene:EG13333" + ], + [ + "gene_synonym", + "GeneID:946644" + ], + [ + "gene_synonym", + "JW0207" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77354" + ], + [ + "gene_synonym", + "b0218" + ], + [ + "gene_synonym", + "yafU" + ] + ], + "dna_sequence": "AGAACCATAGAATTTATTATGAGTTCAGAGCGAGATCTGGTTAATTTTCTTGGCGATTTTTCAATGGATGTGGCCAAAGCAGTTATAGCCGGTGGTGTTGCAACCGCTATTGGAAGTCTGGCTTCTTTTGCCTGTGTTAGCTTTGGCTTTCCAGTAATTCTTGTCGGAGGAGCAATTTTACTGACAGGGATAGTGTGTACAGTTGTTTTAAATGAAATCGATGCTCAATGCCATTTATCAGAAAAATTAAAATATGCAATTAGAGATGGACTAAAACGGCAACAGGAACTTGATAAATGGAAAAGGGAAAACATGACTCCATTTATGTATGTTCTTAACACTCCACCCGTGATATGA", + "dna_sequence_length": 357, + "id": "CDS_208", + "location": [ + [ + "NC_000913", + 239102, + "-", + 357 + ] + ], + "md5": "dc18e4bdea5570b30b50c60ed51eff9b", + "parent_gene": "", + "protein_md5": "bfc7e62d65b60d55daf2ab11d66714b7", + "protein_translation": "RTIEFIMSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285024" + ], + [ + "gene_synonym", + "ECK0219" + ], + [ + "gene_synonym", + "EcoGene:EG11772" + ], + [ + "gene_synonym", + "GeneID:1450235" + ], + [ + "gene_synonym", + "JW0208" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEP9" + ], + [ + "gene_synonym", + "b4503" + ], + [ + "gene_synonym", + "yafF" + ] + ], + "dna_sequence": "GATTTAACCGCAGAGAAGTTCGCCACAGCAATCCGAAACCACTGGCACGTGGAGAATAAGCTGCACAGGCGTCTGGACGTGGTAATGAATGAAGACGACTACAAAATAAGAAGAGGAAACGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGAGAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTACCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAG", + "dna_sequence_length": 273, + "id": "CDS_209", + "location": [ + [ + "NC_000913", + 239106, + "+", + 273 + ] + ], + "md5": "752128b4b4bd741f9fcfc8c6160a14dc", + "parent_gene": "", + "protein_md5": "1f290ee34f64f6f4913bfc6a64a30164", + "protein_translation": "DLTAEKFATAIRNHWHVENKLHRRLDVVMNEDDYKIRRGNAAELFSGIRHIAINILTNEKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000734" + ], + [ + "gene_synonym", + "ECK0220" + ], + [ + "gene_synonym", + "EcoGene:EG13334" + ], + [ + "gene_synonym", + "GI:16128205" + ], + [ + "gene_synonym", + "GeneID:946585" + ], + [ + "gene_synonym", + "JW5019" + ], + [ + "gene_synonym", + "NP_414754.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47679" + ], + [ + "gene_synonym", + "b0219" + ], + [ + "gene_synonym", + "yafV" + ] + ], + "dna_sequence": "GTGCCTGGTTTGAAGATTACGCTTTTGCAGCAACCACTGGTGTGGATGGATGGTCCTGCCAACCTGCGTCATTTTGATCGTCAACTGGAAGGTATTACCGGGCGCGATGTGATCGTTCTACCGGAGATGTTTACCAGCGGCTTTGCCATGGAAGCGGCAGCTTCGTCGCTAGCACAAGATGACGTAGTGAACTGGATGACAGCTAAGGCGCAGCAGTGCAATGCGCTGATTGCAGGCAGTGTTGCATTACAAACGGAGTCTGGTTCGGTTAACCGCTTTTTGCTGGTTGAGCCGGGCGGCACGGTACATTTTTATGATAAGCGTCATCTGTTCCGCATGGCAGATGAGCATCTACATTATAAAGCGGGCAATGCGCGAGTGATTGTGGAATGGCGCGGCTGGCGTATTTTGCCGCTGGTGTGCTACGACTTACGTTTTCCTGTGTGGTCGCGCAATCTCAACGATTATGACCTCGCCCTGTACGTCGCCAACTGGCCTGCTCCGCGCTCTCTGCACTGGCAGGCATTGCTGACGGCCCGCGCGATTGAGAATCAGGCGTATGTGGCGGGATGCAATCGCGTCGGCAGCGATGGCAACGGCTGCCATTATCGCGGTGACAGCCGGGTGATTAATCCGCAAGGAGAGATTATCGCTACTGCCGACGCGCATCAGGCAACGCGCATTGATGCGGAGCTGTCGATGGCAGCATTGCGGGAATATAGAGAAAAGTTTCCGGCATGGCAGGATGCGGATGAGTTTAGGTTGTGGTGA", + "dna_sequence_length": 771, + "functions": [ + "putative NAD(P)-binding C-N hydrolase family amidase" + ], + "id": "CDS_210", + "location": [ + [ + "NC_000913", + 240189, + "-", + 771 + ] + ], + "md5": "8ef51094ff6dc7d62af26650f2a9dea7", + "parent_gene": "", + "protein_md5": "00c5bde862cbecf6b9e06caaadfb0975", + "protein_translation": "MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000740" + ], + [ + "gene_synonym", + "ECK0221" + ], + [ + "gene_synonym", + "EcoGene:EG13547" + ], + [ + "gene_synonym", + "GI:16128206" + ], + [ + "gene_synonym", + "GeneID:946530" + ], + [ + "gene_synonym", + "JW0210" + ], + [ + "gene_synonym", + "NP_414755.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD59" + ], + [ + "gene_synonym", + "b0220" + ], + [ + "gene_synonym", + "ivy" + ], + [ + "gene_synonym", + "ykfE" + ] + ], + "dna_sequence": "ATGGGCAGGATAAGCTCGGGAGGAATGATGTTTAAGGCAATAACGACAGTCGCCGCTCTGGTCATCGCCACCAGTGCAATGGCGCAGGATGATTTAACCATTAGCAGCCTTGCAAAGGGCGAAACCACCAAAGCTGCATTTAATCAGATGGTACAAGGGCATAAGCTGCCTGCCTGGGTGATGAAAGGCGGTACTTATACTCCCGCACAAACCGTAACGTTGGGAGATGAGACGTATCAGGTGATGAGCGCGTGCAAACCGCATGACTGTGGCTCGCAACGTATCGCTGTGATGTGGTCCGAGAAATCTAATCAGATGACGGGGCTGTTCTCGACTATTGATGAGAAAACGTCGCAAGAGAAACTCACCTGGCTGAATGTGAACGATGCGCTTTCGATTGATGGTAAAACGGTGTTGTTCGCGGCGTTGACCGGCAGCCTGGAAAACCATCCGGATGGCTTTAATTTTAAATAA", + "dna_sequence_length": 474, + "functions": [ + "inhibitor of c-type lysozyme, periplasmic" + ], + "id": "CDS_211", + "location": [ + [ + "NC_000913", + 240343, + "+", + 474 + ] + ], + "md5": "9a1f381c090df96373e34e3aee6bcbf1", + "parent_gene": "", + "protein_md5": "238b3de0b3c2ef07111adecfc93154ab", + "protein_translation": "MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000743" + ], + [ + "gene_synonym", + "ECK0222" + ], + [ + "gene_synonym", + "EcoGene:EG13145" + ], + [ + "gene_synonym", + "GI:90111100" + ], + [ + "gene_synonym", + "GeneID:949007" + ], + [ + "gene_synonym", + "JW5020" + ], + [ + "gene_synonym", + "NP_414756.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47146" + ], + [ + "gene_synonym", + "b0221" + ], + [ + "gene_synonym", + "fadE" + ], + [ + "gene_synonym", + "fadF" + ], + [ + "gene_synonym", + "yafH" + ] + ], + "dna_sequence": "ATGATGATTTTGAGTATTCTCGCTACGGTTGTCCTGCTCGGCGCGTTGTTCTATCACCGCGTGAGCTTATTTATCAGCAGTCTGATTTTGCTCGCCTGGACAGCCGCCCTCGGCGTTGCTGGTCTGTGGTCGGCGTGGGTACTGGTGCCTCTGGCCATTATCCTCGTGCCATTTAACTTTGCGCCTATGCGTAAGTCGATGATTTCCGCGCCGGTATTTCGCGGTTTCCGTAAGGTGATGCCGCCGATGTCGCGCACTGAGAAAGAAGCGATTGATGCGGGCACCACCTGGTGGGAGGGCGACTTGTTCCAGGGCAAGCCGGACTGGAAAAAGCTGCATAACTATCCGCAGCCGCGCCTGACCGCCGAAGAGCAAGCGTTTCTCGACGGCCCGGTAGAAGAAGCCTGCCGGATGGCGAATGATTTCCAGATCACCCATGAGCTGGCGGATCTGCCGCCGGAGTTGTGGGCGTACCTTAAAGAGCATCGTTTCTTCGCGATGATCATCAAAAAAGAGTACGGCGGGCTGGAGTTCTCGGCTTATGCCCAGTCTCGCGTGCTGCAAAAACTCTCCGGCGTGAGCGGGATCCTGGCGATTACCGTCGGCGTGCCAAACTCATTAGGCCCGGGCGAACTGTTGCAACATTACGGCACTGACGAGCAGAAAGATCACTATCTGCCGCGTCTGGCGCGTGGTCAGGAGATCCCCTGCTTTGCACTGACCAGCCCGGAAGCGGGTTCCGATGCGGGCGCGATTCCGGACACCGGGATTGTCTGCATGGGCGAATGGCAGGGCCAGCAGGTGCTGGGGATGCGTCTGACCTGGAACAAACGCTACATTACGCTGGCACCGATTGCGACCGTGCTTGGGCTGGCGTTTAAACTCTCCGACCCGGAAAAATTACTCGGCGGTGCAGAAGATTTAGGCATTACCTGTGCGCTGATCCCAACCACCACGCCGGGCGTGGAAATTGGTCGTCGCCACTTCCCGCTGAACGTACCGTTCCAGAACGGACCGACGCGCGGTAAAGATGTCTTCGTGCCGATCGATTACATCATCGGCGGGCCGAAAATGGCCGGGCAAGGCTGGCGGATGCTGGTGGAGTGCCTCTCGGTAGGCCGCGGCATCACCCTGCCTTCCAACTCAACCGGCGGCGTGAAATCGGTAGCGCTGGCAACCGGCGCGTATGCTCACATTCGCCGTCAGTTCAAAATCTCTATTGGTAAGATGGAAGGGATTGAAGAGCCGCTGGCGCGTATTGCCGGTAATGCCTACGTGATGGATGCTGCGGCATCGCTGATTACCTACGGCATTATGCTCGGCGAAAAACCTGCCGTGCTGTCGGCTATCGTTAAGTATCACTGTACCCACCGCGGGCAGCAGTCGATTATTGATGCGATGGATATTACCGGCGGTAAAGGCATTATGCTCGGGCAAAGCAACTTCCTGGCGCGTGCTTACCAGGGCGCACCGATTGCCATCACCGTTGAAGGGGCTAACATTCTGACCCGCAGCATGATGATCTTCGGACAAGGAGCGATTCGTTGCCATCCGTACGTGCTGGAAGAGATGGAAGCGGCGAAGAACAATGACGTCAACGCGTTCGATAAACTGTTGTTCAAACATATCGGTCACGTCGGTAGCAACAAAGTTCGCAGCTTCTGGCTGGGCCTGACGCGCGGTTTAACCAGCAGCACGCCAACCGGCGATGCCACTAAACGCTACTATCAGCACCTGAACCGCCTGAGCGCCAACCTCGCCCTGCTTTCTGATGTCTCGATGGCAGTGCTGGGCGGCAGCCTGAAACGTCGCGAGCGCATCTCGGCCCGTCTGGGGGATATTTTAAGCCAGCTCTACCTCGCCTCTGCCGTGCTGAAGCGTTATGACGACGAAGGCCGTAATGAAGCCGACCTGCCGCTGGTGCACTGGGGCGTACAAGATGCGCTGTATCAGGCTGAACAGGCGATGGATGATTTACTGCAAAACTTCCCGAACCGCGTGGTTGCCGGGCTGCTGAATGTGGTGATCTTCCCGACCGGACGTCATTATCTGGCACCTTCTGACAAGCTGGATCATAAAGTGGCGAAGATTTTACAAGTGCCGAACGCCACCCGTTCCCGCATTGGTCGCGGTCAGTACCTGACGCCGAGCGAGCATAATCCGGTTGGCTTGCTGGAAGAGGCGCTGGTGGATGTGATTGCCGCCGACCCAATTCATCAGCGGATCTGTAAAGAGCTGGGTAAAAACCTGCCGTTTACCCGTCTGGATGAACTGGCGCACAACGCGCTGGTGAAGGGGCTGATTGATAAAGATGAAGCCGCTATTCTGGTGAAAGCTGAAGAAAGCCGTCTGCGCAGTATTAACGTTGATGACTTTGATCCGGAAGAGCTGGCGACGAAGCCGGTAAAGTTGCCGGAGAAAGTGCGGAAAGTTGAAGCCGCGTAA", + "dna_sequence_length": 2445, + "functions": [ + "acyl coenzyme A dehydrogenase" + ], + "id": "CDS_212", + "location": [ + [ + "NC_000913", + 243303, + "-", + 2445 + ] + ], + "md5": "7bc53839c048da8edccc4bc1e30d0a45", + "parent_gene": "", + "protein_md5": "8d032e73dd5e90940f93152341cda159", + "protein_translation": "MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA", + "protein_translation_length": 814, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000751" + ], + [ + "gene_synonym", + "ECK0223" + ], + [ + "gene_synonym", + "EcoGene:EG13146" + ], + [ + "gene_synonym", + "GI:16128208" + ], + [ + "gene_synonym", + "GeneID:949134" + ], + [ + "gene_synonym", + "JW0212" + ], + [ + "gene_synonym", + "NP_414757.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63224" + ], + [ + "gene_synonym", + "b0222" + ], + [ + "gene_synonym", + "gmhA" + ], + [ + "gene_synonym", + "isn" + ], + [ + "gene_synonym", + "lpcA" + ], + [ + "gene_synonym", + "tfrA" + ], + [ + "gene_synonym", + "yafI" + ] + ], + "dna_sequence": "ATGTACCAGGATCTTATTCGTAACGAACTGAACGAAGCGGCGGAAACGCTGGCTAACTTTTTAAAAGATGACGCCAATATTCACGCCATTCAGCGCGCGGCGGTCCTGTTAGCAGACAGCTTTAAAGCCGGTGGCAAAGTGCTTTCCTGCGGCAACGGCGGTTCCCATTGCGACGCTATGCACTTTGCCGAAGAGTTGACCGGTCGCTACCGTGAAAACCGTCCGGGCTACCCGGCGATTGCTATTTCTGACGTTAGTCATATTTCCTGCGTCGGTAATGATTTCGGTTTCAATGATATTTTCTCCCGCTACGTTGAAGCGGTAGGTCGCGAAGGCGATGTACTGCTGGGGATCTCCACCTCCGGTAACTCTGCAAACGTGATCAAAGCGATCGCAGCGGCGCGTGAGAAGGGAATGAAAGTGATCACCCTGACCGGTAAAGACGGCGGCAAAATGGCTGGCACGGCGGATATCGAAATTCGCGTACCGCACTTTGGTTATGCCGACCGCATTCAGGAGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAA", + "dna_sequence_length": 579, + "functions": [ + "D-sedoheptulose 7-phosphate isomerase" + ], + "id": "CDS_213", + "location": [ + [ + "NC_000913", + 243543, + "+", + 579 + ] + ], + "md5": "45523881137225e7f624f03892d124b2", + "parent_gene": "", + "protein_md5": "327c877d6f5c7e3c5044d7e2ffeb1d4e", + "protein_translation": "MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000755" + ], + [ + "gene_synonym", + "ECK0224" + ], + [ + "gene_synonym", + "EcoGene:EG13147" + ], + [ + "gene_synonym", + "GI:16128209" + ], + [ + "gene_synonym", + "GeneID:944906" + ], + [ + "gene_synonym", + "JW0213" + ], + [ + "gene_synonym", + "NP_414758.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47147" + ], + [ + "gene_synonym", + "b0223" + ], + [ + "gene_synonym", + "yafJ" + ] + ], + "dna_sequence": "ATGTGCGAATTGCTCGGGATGAGCGCCAACGTCCCTACCGATATCTGCTTTAGTTTCACCGGGCTTGTACAGCGTGGTGGTGGAACCGGGCCACATAAAGATGGCTGGGGCATTACCTTTTACGAAGGTAAAGGCTGTCGCACATTTAAAGATCCACAACCCAGCTTTAATTCCCCCATCGCCAAACTTGTCCAGGACTACCCGATAAAATCCTGTTCGGTGGTGGCTCATATTCGCCAGGCTAATCGGGGCGAGGTGGCGCTGGAAAATACTCACCCATTTACCCGCGAGTTATGGGGGCGTAACTGGACTTATGCCCATAACGGACAACTGACGGGCTACAAATCACTGGAAACCGGCAACTTCCGCCCGGTAGGCGAAACCGACAGCGAAAAAGCCTTCTGCTGGCTCCTGCATAAATTAACGCAGCGTTACCCGCGCACACCGGGCAACATGGCGGCGGTATTTAAATATATCGCCTCACTGGCGGATGAACTGCGGCAGAAGGGCGTTTTCAACATGCTGCTTTCGGACGGGCGCTATGTAATGGCGTATTGCTCGACTAATTTACACTGGATCACCCGCCGCGCGCCGTTTGGCGTGGCAACGTTGCTGGATCAGGATGTGGAAATCGACTTCAGCTCGCAGACCACACCGAATGATGTGGTCACGGTGATTGCAACACAGCCGCTGACGGGCAATGAAACCTGGCAAAAGATTATGCCAGGCGAATGGCGCTTATTTTGCCTCGGGGAGCGTGTAGTTTGA", + "dna_sequence_length": 768, + "functions": [ + "type 2 glutamine amidotransferase family protein" + ], + "id": "CDS_214", + "location": [ + [ + "NC_000913", + 244327, + "+", + 768 + ] + ], + "md5": "ecde80afa0d465834240ac3ba74aa649", + "parent_gene": "", + "protein_md5": "5b3a74c3ccac39b6b6ad2d79e078b3be", + "protein_translation": "MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000757" + ], + [ + "gene_synonym", + "ECK0225" + ], + [ + "gene_synonym", + "EcoGene:EG13148" + ], + [ + "gene_synonym", + "GI:16128210" + ], + [ + "gene_synonym", + "GeneID:944910" + ], + [ + "gene_synonym", + "JW0214" + ], + [ + "gene_synonym", + "NP_414759.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA99" + ], + [ + "gene_synonym", + "b0224" + ], + [ + "gene_synonym", + "yafK" + ] + ], + "dna_sequence": "ATGCGTAAAATCGCATTAATTCTTGCGATGTTGTTGATCCCGTGCGTTTCATTTGCCGGTTTGCTGGGCAGCAGTAGCTCTACCACGCCTGTGAGCAAAGAGTATAAGCAGCAGTTGATGGGATCCCCTGTCTACATCCAGATCTTCAAGGAAGAACGTACGCTCGATCTCTACGTCAAAATGGGCGAGCAATATCAACTGCTCGACAGCTATAAAATCTGTAAATATTCCGGCGGCTTAGGGCCAAAACAGCGTCAGGGCGATTTCAAAAGCCCGGAAGGGTTTTATAGCGTCCAGCGTAATCAGTTAAAACCAGACAGCCGTTACTACAAAGCGATTAATATTGGTTTCCCCAATGCCTATGACCGTGCGCATGGTTATGAAGGGAAATACCTGATGATCCACGGCGATTGTGTTTCCATCGGCTGCTACGCAATGACCAATCAGGGTATTGATGAGATATTCCAGTTCGTTACTGGTGCGCTGGTGTTTGGTCAGCCGAGCGTGCAAGTGAGTATTTACCCGTTCCGCATGACCGACGCCAATATGAAGCGCCATAAATATTCCAACTTTAAGGACTTCTGGGAGCAACTGAAGCCGGGTTACGACTACTTTGAGCAAACCCGTAAGCCACCAACCGTTTCTGTGGTCAATGGTCGTTACGTGGTCAGCAAGCCGTTAAGCCACGAAGTTGTGCAGCCACAACTGGCATCAAACTACACGCTCCCCGAGGCAAAATAA", + "dna_sequence_length": 741, + "functions": [ + "L,D-transpeptidase-related protein" + ], + "id": "CDS_215", + "location": [ + [ + "NC_000913", + 245805, + "-", + 741 + ] + ], + "md5": "c8dcd31961920082284f94479bde45b5", + "parent_gene": "", + "protein_md5": "99472ffcb58487c5aaf42e057c101ab1", + "protein_translation": "MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000761" + ], + [ + "gene_synonym", + "ECK0226" + ], + [ + "gene_synonym", + "EcoGene:EG13154" + ], + [ + "gene_synonym", + "GI:16128211" + ], + [ + "gene_synonym", + "GeneID:944911" + ], + [ + "gene_synonym", + "JW0215" + ], + [ + "gene_synonym", + "NP_414760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47149" + ], + [ + "gene_synonym", + "b0225" + ], + [ + "gene_synonym", + "yafQ" + ] + ], + "dna_sequence": "ATGATTCAAAGGGATATTGAATACTCGGGACAATATTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAATAAATTGAAATATCTTATGACGCTTCTTATCAATAATACTTTACCGCTTCCAGCTGTTTATAAAGACCACCCGCTGCAAGGTTCATGGAAAGGTTATCGCGATGCTCATGTCGAACCGGACTGGATCCTGATTTACAAACTTACCGATAAACTTTTACGATTTGAGAGAACTGGAACTCACGCGGCGCTCTTTGGGTAA", + "dna_sequence_length": 279, + "functions": [ + "mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ" + ], + "id": "CDS_216", + "location": [ + [ + "NC_000913", + 246239, + "-", + 279 + ] + ], + "md5": "f6d21fdd54b9ee93bc348110c23aad9a", + "parent_gene": "", + "protein_md5": "a4fdd8c0939bdd567d3feb8ccc8b86db", + "protein_translation": "MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000764" + ], + [ + "gene_synonym", + "ECK0227" + ], + [ + "gene_synonym", + "EcoGene:EG13142" + ], + [ + "gene_synonym", + "GI:16128212" + ], + [ + "gene_synonym", + "GeneID:944914" + ], + [ + "gene_synonym", + "JW0216" + ], + [ + "gene_synonym", + "NP_414761.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47150" + ], + [ + "gene_synonym", + "b0226" + ], + [ + "gene_synonym", + "dinJ" + ], + [ + "gene_synonym", + "sosA" + ] + ], + "dna_sequence": "ATGGCTGCTAACGCGTTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCAGCGGACGTACTGGCCGGGATGGGGCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGCCTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCATTGATGTTCATAAGGCCAAAGACGCCGATGATTTATTTGATAAATTAGGAATTTAA", + "dna_sequence_length": 261, + "functions": [ + "antitoxin of YafQ-DinJ toxin-antitoxin system" + ], + "id": "CDS_217", + "location": [ + [ + "NC_000913", + 246502, + "-", + 261 + ] + ], + "md5": "4c9bd396db89f3f1a6060c8f913ee4be", + "parent_gene": "", + "protein_md5": "8ed30fa024c83ac35ce6b448a8331891", + "protein_translation": "MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000775" + ], + [ + "gene_synonym", + "ECK0228" + ], + [ + "gene_synonym", + "EcoGene:EG13149" + ], + [ + "gene_synonym", + "GI:16128213" + ], + [ + "gene_synonym", + "GeneID:944899" + ], + [ + "gene_synonym", + "JW0217" + ], + [ + "gene_synonym", + "NP_414762.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47151" + ], + [ + "gene_synonym", + "b0227" + ], + [ + "gene_synonym", + "yafL" + ] + ], + "dna_sequence": "ATGTCCTTGCCGTCGATTCCATCCTTTGTATTGTCGGGATTACTGTTGATTTGTTTGCCGTTTTCTTCATTTGCCAGCGCCACCACATCACATATCTCTTTCAGCTACGCCGCCCGCCAGCGGATGCAAAACCGTGCGCGTTTATTAAAACAGTACCAAACTCATCTGAAAAAGCAGGCCAGCTATATTGTGGAAGGCAATGCCGAAAGCAAAAGGGCGCTACGCCAGCACAACCGGGAGCAGATAAAACAGCATCCAGAATGGTTTCCTGCTCCGCTCAAGGCGAGTGACAGACGCTGGCAGGCGCTGGCGGAAAACAACCACTTTTTAAGCAGCGACCATCTGCATAACATTACCGAAGTGGCGATTCACCGCCTGGAGCAGCAGCTTGGCAAGCCTTACGTCTGGGGCGGTACGCGGCCTGATAAAGGCTTTGACTGTAGCGGGTTGGTTTTTTATGCCTACAACAAGATCCTTGAGGCTAAGCTCCCGCGCACGGCCAATGAGATGTACCACTATCGCCGGGCAACGATTGTGGCGAACAACGACCTGCGCCGGGGAGATTTGCTGTTTTTCCATATCCACAGCCGCGAGATAGCCGATCATATGGGCGTGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAG", + "dna_sequence_length": 750, + "functions": [ + "putative lipoprotein and C40 family peptidase" + ], + "id": "CDS_218", + "location": [ + [ + "NC_000913", + 246712, + "+", + 750 + ] + ], + "md5": "d8acd042b978e85335d5a7a7fa5e0172", + "parent_gene": "", + "protein_md5": "d3101b7952ca74c6256e50fa5a6d9bcf", + "protein_translation": "MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000779" + ], + [ + "gene_synonym", + "ECK0229" + ], + [ + "gene_synonym", + "EcoGene:EG13150" + ], + [ + "gene_synonym", + "GI:16128214" + ], + [ + "gene_synonym", + "GeneID:944913" + ], + [ + "gene_synonym", + "JW0218" + ], + [ + "gene_synonym", + "NP_414763.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47152" + ], + [ + "gene_synonym", + "b0228" + ], + [ + "gene_synonym", + "rayT" + ], + [ + "gene_synonym", + "tnpAREP" + ], + [ + "gene_synonym", + "yafM" + ] + ], + "dna_sequence": "ATGTCTGAATATCGTCGTTATTACATCAAGGGGGGAACATGGTTTTTCACGGTGAATTTACGAAATCGTCGAAGCCAACTTTTGACCACCCAGTACCAGATGCTCCGTCACGCCATTATTAAAGTTAAGCGAGACAGGCCTTTTGAAATCAACGCCTGGGTCGTTTTGCCAGAGCATATGCACTGTATCTGGACATTACCTGAAGGCGATGATGATTTTTCCTCGCGCTGGCGGGAAATTAAAAAGCAATTTACCCATGCTTGTGGATTGAAAAATATCTGGCAACCACGTTTTTGGGAGCACGCCATCCGCAATACCAAAGATTATAGGCATCATGTTGATTATATTTATATAAATCCAGTAAAGCATGGTTGGGTAAAGCAAGTGAGTGATTGGCCATTCTCAACGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAA", + "dna_sequence_length": 498, + "functions": [ + "RAYT REP element-mobilizing transposase", + "TnpA(REP)" + ], + "id": "CDS_219", + "location": [ + [ + "NC_000913", + 247637, + "+", + 498 + ] + ], + "md5": "ef033fb6403a725c27e816f43c76f338", + "parent_gene": "", + "protein_md5": "a7dd34640dfd0c50d302f2c4aebba93f", + "protein_translation": "MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAGERIIS", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000782" + ], + [ + "gene_synonym", + "ECK0230" + ], + [ + "gene_synonym", + "EcoGene:EG13144" + ], + [ + "gene_synonym", + "GeneID:944908" + ], + [ + "gene_synonym", + "JW5811" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47153" + ], + [ + "gene_synonym", + "b0229" + ], + [ + "gene_synonym", + "fhiA" + ], + [ + "gene_synonym", + "lfhA" + ] + ], + "dna_sequence": "CTGTTGACAATCAACTTTATTGTCGTCACCAAAGGGGCCGAGCGTATTTCCGAGGTTTCTGCCCGCTTTACCTTAGACGCGATGCCCGGCAAACAGATGGCGATTGACGCCGATCTTAACGCCGGATTGATCAACCAGGCGCAGGCGCAAACCCGGCGTAAAGATGTTGCCAGCGAGGCCGATTTCTACGGCGCGATGGACGGGGCATCGAAGTTTGTGCGCGGGGACGCCATCGCCGGGATGATGATTCTGGCGATCAACCTGATCGGCGGCGTCTGTATCGGGATCTTCAAATACAACCTGAGCGCCGATGCTGCCTTCCAGCAGTATGTGCTGATGACCATCGGCGACGGCCTGGTGGCGCAGATCCCTTCCCTGCTGCTCTCCACCGCGGCGGCGATTATCGTCACCCGCGTCAGCGACAACGGCGATATCGCCCATGACGTGCGTAACCAGCTGCTGGCAAGCCCGTCGGTGCTCTACACCGCCACCGGGATTATGTTCGTGCTGGCGGTGGTACCGGGAATGCCGCACCTGCCGTTTTTGCTGTTCAGCGCCCTGCTTGGTTTTACCGGCTGGCGGATGAGCAAACAGCCGCTGGCGGCGGAGGCGGAAGAGAAAAGCCTCGAAACGCTGACCCGCACCATCACCGAAACCAGCGAGCAGCAGGTCAGTTGGGAAACCATTCCGCTGATCGAGCCTATCAGTTTAAGCCTCGGTTACAAACTGGTGGCGCTGGTGGACAAAGCACAGGGTAACCCGCTCACCCAGCGGATTCGCGGCGTGCGGCAGGTGATTTCTGACGGCAACGGCGTGCTGCTGCCGGAGATCCGCATTCGGGAAAACTTCCGCCTTAAGCCCAGTCAGTACGCCATTTTCATCAACGGCATAAAGGCTGATGAAGCGGATATTCCGGCGGATAAACTGATGGCCCTGCCCTCCAGCGAAACCTACGGCGAGATTGACGGCGTGCAGGGGAACGACCCGGCGTACGGGATGCCGGTCACCTGGATCCAGGCGGCGCAGAAAGCGAAGGCGCTGAATATGGGGTATCAGGTGATCGACAGCGCCAGCGTGATCGCTACCCATGTAAATAAGATTGTGCGCAGCTATATTCCTGATTTGTTTAACTATGATGATATTACGCAGTTGCATAACCGTTTATCGTCGACGGCACCGCGTCTGGCGGAAGATTTGAGCGCGGCGCTCAATTACAGCCAGTTGCTGAAAGTGTACCGGGCGCTGCTGACCGAAGGCGTTTCCCTGCGCGATATCGTCACCATCGCCACCGTGCTGGTCGCCAGTAGCACGGTGACGAAAGATCATATTCTGCTGGCGGCCGATGTGCGCCTGGCATTGCGGCGCAGCATTACCCATCCGTTCGTTCGCAAGCAGGAGCTGACGGTGTATACGCTGAATAATGAGCTGGAAAATCTGCTGACCAACGTGGTGAATCAGGCGCAACAGGGCGGGAAAGTGATGCTCGACAGCGTGCCGGTCGATCCGAATATGCTCAACCAGTTCCAGAGTACGATGCCACAGGTGAAAGAGCAGATGAAAGCGGCGGGGAAAGACCCGGTGCTGCTGGTGCCACCGCAGCTGCGCCCTTTGCTGGCGCGTTATGCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAA", + "dna_sequence_length": 1713, + "id": "CDS_220", + "location": [ + [ + "NC_000913", + 250070, + "-", + 1713 + ] + ], + "md5": "2e124ac77b6c438f3796fa1ac8b03376", + "parent_gene": "", + "protein_md5": "73a3cb1df1043dd763cd7f151bfe378a", + "protein_translation": "LLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRNQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKQPLAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVQGNDPAYGMPVTWIQAAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSTAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM", + "protein_translation_length": 570, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000785" + ], + [ + "gene_synonym", + "ECK0231" + ], + [ + "gene_synonym", + "EcoGene:EG13143" + ], + [ + "gene_synonym", + "GeneID:944921" + ], + [ + "gene_synonym", + "JW5812" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47154" + ], + [ + "gene_synonym", + "b0230" + ], + [ + "gene_synonym", + "lafU" + ], + [ + "gene_synonym", + "mbhA" + ] + ], + "dna_sequence": "GTCAGTAAATCCGAGCGTGAAAGCATTATCGCCGCGCTGCACGGGCAGTCGATTTTTAACGGTGGTGGGCTGTCGCCGTTAAATAAAATCAGCCCGTCTCATCCGCCAAAACCTGCCACCGTGGCGGTGCCGGAAGAGACGGAGAAAAAAGCGCGTGATGTGAATGAGAAAACGGCGCTGCTGAAGAAGAAATCCGCCACCGAGCTTGGTGAGCTGGCAACCAGTATCAACACCATTGCCCGTGATGCGCATATGGAAGCGAATCTGGAGATGGAGATTGTTCCCCAGGGATTACGCGTGCTGATTAAAGACGACCAGAACCGCAATATGTTTGAACGCGGCAGCGCGAAGATTATGCCGTTCTTTAAAACGCTGCTGGTGGAGCTCGCGCCAGTGTTCGACTCGCTCGATAATAAAATTATTATTACCGGGCATACCGATGCGATGGCCTACAAAAACAATATCTACAACAACTGGAACCTTTCGGGTGACCGCGCGCTTTCGGCTCGTCGGGTGCTGGAAGAGGCCGGAATGCCGGAAGATAAAGTGATGCAGGTAAGCGCAATGGCGGACCAGATGCTGCTGGATTCCAAAAATCCGCAAAGCGCGGGCAACCGGCGCATTGAGATTATGGTGCTGACCAAAAGTGCGTCCGATACGCTGTATCAATACTTTGGTCAGCATGGGGATAAAGTGGTGCAGCCGCTGGTGCAAAAGCTGGATAAGCAGCAGGTGCTTTCGCAGCGAACGCGTTAA", + "dna_sequence_length": 756, + "id": "CDS_221", + "location": [ + [ + "NC_000913", + 250072, + "+", + 756 + ] + ], + "md5": "58700e6c24724d5221f660b254597e55", + "parent_gene": "", + "protein_md5": "4e9ec3a1d34d7a9f74d6d6bbc3dfc2a2", + "protein_translation": "VSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000789" + ], + [ + "gene_synonym", + "ECK0232" + ], + [ + "gene_synonym", + "EcoGene:EG13141" + ], + [ + "gene_synonym", + "GI:16128217" + ], + [ + "gene_synonym", + "GeneID:944922" + ], + [ + "gene_synonym", + "JW0221" + ], + [ + "gene_synonym", + "NP_414766.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47155" + ], + [ + "gene_synonym", + "b0231" + ], + [ + "gene_synonym", + "dinB" + ], + [ + "gene_synonym", + "dinP" + ] + ], + "dna_sequence": "ATGCGTAAAATCATTCATGTGGATATGGACTGCTTTTTCGCCGCAGTGGAGATGCGCGACAATCCCGCCCTGCGCGATATCCCTATTGCTATTGGCGGCAGCCGCGAACGTCGGGGGGTGATCAGCACCGCCAATTATCCCGCGCGTAAATTTGGCGTACGTAGCGCTATGCCGACAGGGATGGCGCTCAAATTATGCCCACATCTCACCTTGCTTCCGGGGCGCTTTGACGCCTACAAAGAAGCCTCAAATCATATCCGTGAAATCTTCTCGCGCTACACCTCGCGCATTGAACCGTTGTCACTGGATGAGGCTTATCTCGATGTCACCGATAGCGTCCATTGCCACGGTTCTGCGACCCTCATCGCCCAGGAAATCCGCCAGACAATCTTCAACGAGCTGCAACTGACGGCGTCTGCGGGCGTGGCACCAGTAAAGTTTCTCGCCAAAATCGCCTCCGACATGAATAAACCCAACGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCGGCATTTTTACAAACCTTACCGCTGGCAAAAATCCCCGGCGTCGGCAAAGTCTCAGCGGCAAAACTGGAAGCGATGGGGCTGCGGACCTGCGGTGATGTACAAAAGTGTGATCTGGTGATGCTGCTTAAACGCTTTGGCAAATTTGGCCGCATTTTGTGGGAGCGTAGTCAGGGGATTGACGAACGCGATGTTAACAGCGAACGGTTGCGAAAATCCGTCGGCGTGGAACGCACGATGGCGGAAGATATTCATCACTGGTCTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGA", + "dna_sequence_length": 1056, + "functions": [ + "DNA polymerase IV" + ], + "id": "CDS_222", + "location": [ + [ + "NC_000913", + 250898, + "+", + 1056 + ] + ], + "md5": "faeb2625ff37b96911d625e0dd68301c", + "parent_gene": "", + "protein_md5": "aadc10fda1d5a3dde4488aa54bf32245", + "protein_translation": "MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL", + "protein_translation_length": 351, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000793" + ], + [ + "gene_synonym", + "ECK0233" + ], + [ + "gene_synonym", + "EcoGene:EG13151" + ], + [ + "gene_synonym", + "GI:16128218" + ], + [ + "gene_synonym", + "GeneID:944920" + ], + [ + "gene_synonym", + "JW0222" + ], + [ + "gene_synonym", + "NP_414767.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47156" + ], + [ + "gene_synonym", + "b0232" + ], + [ + "gene_synonym", + "yafN" + ] + ], + "dna_sequence": "ATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAAAGCCCATAAAGGCGCGCTTCCGTCCAAGTGCTGCAAGATTAGAGGAAATTACACGCCGCGCTGAACAATATCTTAATGATATGACGGATGATGATTTCAATGACTTTAAGGAATAA", + "dna_sequence_length": 294, + "functions": [ + "antitoxin of the YafO-YafN toxin-antitoxin system" + ], + "id": "CDS_223", + "location": [ + [ + "NC_000913", + 252005, + "+", + 294 + ] + ], + "md5": "5c96f049f8670093c54010697eee88c2", + "parent_gene": "", + "protein_md5": "ecc5a635e995e76849ec0f547771981e", + "protein_translation": "MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000795" + ], + [ + "gene_synonym", + "ECK0234" + ], + [ + "gene_synonym", + "EcoGene:EG13152" + ], + [ + "gene_synonym", + "GI:16128219" + ], + [ + "gene_synonym", + "GeneID:944916" + ], + [ + "gene_synonym", + "JW0223" + ], + [ + "gene_synonym", + "NP_414768.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47157" + ], + [ + "gene_synonym", + "b0233" + ], + [ + "gene_synonym", + "yafO" + ] + ], + "dna_sequence": "ATGCGGGTATTCAAAACAAAACTTATTCGCCTGCAACTTACAGCAGAGGAACTTGATGCGTTAACGGCGGATTTTATTTCCTATAAGCGTGACGGTGTTTTGCCAGATATATTTGGTCGCGATGCACTCTACGACGACTCCTTTACCTGGCCATTAATCAAATTTGAGCGAGTTGCTCATATTCATCTGGCAAATGAGAATAATCCATTTCCGCCACAGTTGCGCCAATTCAGCAGAACGAATGACGAAGCGCATTTGGTATATTGTCAGGGGGCGTTTGATGAGCAAGCATGGTTGCTCATTGCCATTCTGAAACCTGAACCTCATAAACTGGCTCGAGATAACAACCAAATGCATAAAATTGGGAAAATGGCAGAAGCGTTTCGCATGCGTTTTTGA", + "dna_sequence_length": 399, + "functions": [ + "mRNA interferase toxin of the YafO-YafN toxin-antitoxin system" + ], + "id": "CDS_224", + "location": [ + [ + "NC_000913", + 252301, + "+", + 399 + ] + ], + "md5": "3218cd5c03743f83dd7b3e3ebd2d9272", + "parent_gene": "", + "protein_md5": "3d59728167be71a1ea25f5f9e3364ea3", + "protein_translation": "MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000801" + ], + [ + "gene_synonym", + "ECK0235" + ], + [ + "gene_synonym", + "EcoGene:EG13153" + ], + [ + "gene_synonym", + "GI:16128220" + ], + [ + "gene_synonym", + "GeneID:944912" + ], + [ + "gene_synonym", + "JW0224" + ], + [ + "gene_synonym", + "NP_414769.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47158" + ], + [ + "gene_synonym", + "b0234" + ], + [ + "gene_synonym", + "yafP" + ] + ], + "dna_sequence": "ATGAATAACATACAAATAAGAAACTATCAGCCTGGCGATTTTCAGCAACTATGCGCTATTTTCATTAGAGCGGTTACGATGACCGCCAGTCAGCATTATTCACCACAACAAATTTCCGCCTGGGCGCAGATTGACGAATCTCGCTGGAAGGAGAAACTCGCGAAATCACAAGTGTGGGTTGCGATCATTAATGCACAACCGGTTGGTTTTATTTCCCGCATTGAACATTATATCGATATGTTATTTGTTGACCCTGAATACACCCGCCGTGGGGTTGCCAGCGCTTTGTTAAAACCTTTGATTAAGTCTGAATCCGAACTTACGGTGGACGCAAGCATAACCGCAAAACCCTTTTTTGAACGTTATGGTTTTCAGACAGTTAAGCAGCAGCGCGTTGAATGCCGGGGAGCGTGGTTTACTAATTTTTATATGCGATATAAACCGCAACATTAA", + "dna_sequence_length": 453, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_225", + "location": [ + [ + "NC_000913", + 252709, + "+", + 453 + ] + ], + "md5": "dd3e6aebca248a96fbe31db35ce098d5", + "parent_gene": "", + "protein_md5": "c2789699b17058c323cc6f7a230d8997", + "protein_translation": "MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQIDESRWKEKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000805" + ], + [ + "gene_synonym", + "ECK0236" + ], + [ + "gene_synonym", + "EcoGene:EG14368" + ], + [ + "gene_synonym", + "GeneID:944924" + ], + [ + "gene_synonym", + "JW0225" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75675" + ], + [ + "gene_synonym", + "b0235" + ], + [ + "gene_synonym", + "ykfJ" + ] + ], + "dna_sequence": "ATGGGCAAATATATTCGTCCCTTATCCGATGCGGTATTTACCATCGCATCTGATGACCTGTGGATCGAGAGTTTAGCGATCCAACAATTACACACCACGGCAAATTTACCCAACATGCAGCGCGTAGTGGGGATGCCAGATTTACACCCCGGACGCGGCTACCCGATTGGCGCAGCGTTCTTCTCTGTTGGTCGTTTTTACCCGGCA", + "dna_sequence_length": 207, + "id": "CDS_226", + "location": [ + [ + "NC_000913", + 253479, + "+", + 207 + ] + ], + "md5": "dec8cfefd1fccf6570ebab2ce81de461", + "parent_gene": "", + "protein_md5": "30a6be5bcf14554b76f562d15ca2b550", + "protein_translation": "MGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPA", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000807" + ], + [ + "gene_synonym", + "ECK0237" + ], + [ + "gene_synonym", + "EcoGene:EG11496" + ], + [ + "gene_synonym", + "GeneID:947374" + ], + [ + "gene_synonym", + "JW0226" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28369" + ], + [ + "gene_synonym", + "b0236" + ], + [ + "gene_synonym", + "prfH" + ] + ], + "dna_sequence": "GTGCTGGAAACAGAAACGGGCCGCTACTCTGACACACTGCGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTATGAGACGCTGCGTTCGTCGGGGCCGGGCGGTCAACATGTCAATAAAACCGACTCGGCGGTACGCGCCACGCATTTGGCATCCGGTATTAGCGTGAAGGTTCAGTCAGAGCGTAGTCAGCATGCTAACAAGCGGCTGGCACGATTGCTGATTGCCTGGAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCATCACCAGATTGAACGTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAA", + "dna_sequence_length": 501, + "id": "CDS_227", + "location": [ + [ + "NC_000913", + 253702, + "+", + 501 + ] + ], + "md5": "92c9263a10fb983ede04d6f584cd46ef", + "parent_gene": "", + "protein_md5": "35b179e7270a3e8c4908043932769be7", + "protein_translation": "VLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAFIEG", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000809" + ], + [ + "gene_synonym", + "ECK0238" + ], + [ + "gene_synonym", + "EcoGene:EG10695" + ], + [ + "gene_synonym", + "GI:16128223" + ], + [ + "gene_synonym", + "GeneID:945013" + ], + [ + "gene_synonym", + "JW0227" + ], + [ + "gene_synonym", + "NP_414772.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15288" + ], + [ + "gene_synonym", + "b0237" + ], + [ + "gene_synonym", + "pepD" + ], + [ + "gene_synonym", + "pepH" + ] + ], + "dna_sequence": "GTGTCTGAACTGTCTCAATTATCTCCACAGCCGCTGTGGGATATTTTTGCCAAAATCTGTTCTATTCCTCACCCGTCCTATCATGAAGAGCAACTCGCTGAATACATTGTTGGTTGGGCAAAAGAGAAAGGTTTCCATGTCGAACGCGATCAGGTAGGTAATATCCTGATTCGTAAACCTGCTACCGCAGGTATGGAAAATCGTAAACCGGTCGTCTTACAGGCCCACCTCGATATGGTGCCGCAGAAAAATAACGACACCGTGCATGACTTCACGAAAGATCCTATCCAGCCTTATATTGATGGCGAATGGGTTAAAGCGCGCGGCACCACGCTGGGTGCGGATAACGGCATTGGTATGGCCTCTGCGCTGGCGGTTCTGGCTGACGAAAACGTGGTTCACGGCCCGCTGGAAGTGCTGCTGACCATGACCGAAGAAGCCGGTATGGACGGTGCGTTCGGCTTACAGGGCAACTGGTTGCAGGCTGATATTCTGATTAACACCGACTCCGAAGAAGAAGGTGAAATCTACATGGGTTGTGCGGGGGGTATCGACTTCACCTCCAACCTGCATTTAGATCGTGAAGCGGTTCCAGCTGGTTTTGAAACCTTCAAGTTAACCTTAAAAGGTCTGAAAGGCGGTCACTCCGGCGGGGAAATCCACGTTGGGCTGGGTAATGCCAACAAACTGCTGGTGCGCTTCCTGGCGGGTCATGCGGAAGAACTGGATCTGCGCCTTATCGATTTCAACGGCGGCACACTGCGTAACGCCATCCCGCGTGAAGCCTTTGCGACCATTGCTGTCGCAGCTGATAAAGTCGACGTCCTGAAATCTCTGGTGAATACCTATCAGGAGATCCTGAAAAACGAGCTGGCAGAAAAAGAGAAAAATCTGGCCTTGTTGCTGGACTCTGTAGCGAACGATAAAGCTGCCCTGATTGCGAAATCTCGCGATACCTTTATTCGTCTGCTGAACGCCACCCCGAACGGTGTGATTCGTAACTCCGATGTAGCCAAAGGTGTGGTTGAAACCTCCCTGAACGTCGGTGTGGTGACCATGACTGACAATAACGTAGAAATTCACTGCCTGATCCGTTCACTGATCGACAGCGGTAAAGACTACGTGGTGAGCATGCTGGATTCGCTGGGTAAACTGGCTGGCGCGAAAACCGAAGCGAAAGGCGCATATCCTGGCTGGCAGCCGGACGCTAATTCTCCGGTGATGCATCTGGTACGTGAAACCTATCAGCGCCTGTTCAACAAGACGCCGAACATCCAGATTATCCACGCGGGCCTGGAATGTGGTCTGTTCAAAAAACCGTATCCGGAAATGGACATGGTTTCTATCGGGCCAACTATCACCGGTCCACACTCTCCGGATGAGCAAGTTCACATCGAAAGCGTAGGTCATTACTGGACACTGCTGACTGAACTGCTGAAAGAAATTCCGGCGAAGTAA", + "dna_sequence_length": 1458, + "functions": [ + "aminoacyl-histidine dipeptidase (peptidase D)" + ], + "id": "CDS_228", + "location": [ + [ + "NC_000913", + 255716, + "-", + 1458 + ] + ], + "md5": "5fd6264bb93a9313c21c33ca2cddb985", + "parent_gene": "", + "protein_md5": "20366e6478e718e8915829d148f86506", + "protein_translation": "MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK", + "protein_translation_length": 485, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000814" + ], + [ + "gene_synonym", + "ECK0239" + ], + [ + "gene_synonym", + "EcoGene:EG10414" + ], + [ + "gene_synonym", + "GI:16128224" + ], + [ + "gene_synonym", + "GeneID:944817" + ], + [ + "gene_synonym", + "JW0228" + ], + [ + "gene_synonym", + "NP_414773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9M5" + ], + [ + "gene_synonym", + "b0238" + ], + [ + "gene_synonym", + "gpp" + ], + [ + "gene_synonym", + "gpt" + ], + [ + "gene_synonym", + "gxu" + ] + ], + "dna_sequence": "ATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAACCGGCTGGTCGTCCGCTGGTTGATGACTATGTTGTTGATATCCCGCAAGATACCTGGATTGAACAGCCGTGGGATATGGGCGTCGTATTCGTCCCGCCAATCTCCGGTCGCTAA", + "dna_sequence_length": 459, + "functions": [ + "xanthine phosphoribosyltransferase", + "xanthine-guanine phosphoribosyltransferase" + ], + "id": "CDS_229", + "location": [ + [ + "NC_000913", + 255977, + "+", + 459 + ] + ], + "md5": "81c950e7a246c3ef95ff5e7592fabefe", + "parent_gene": "", + "protein_md5": "dc744fab454245b67afe74913115ff1f", + "protein_translation": "MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000817" + ], + [ + "gene_synonym", + "ECK0240" + ], + [ + "gene_synonym", + "EcoGene:EG11091" + ], + [ + "gene_synonym", + "GI:16128225" + ], + [ + "gene_synonym", + "GeneID:946039" + ], + [ + "gene_synonym", + "JW0229" + ], + [ + "gene_synonym", + "NP_414774.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04335" + ], + [ + "gene_synonym", + "b0239" + ], + [ + "gene_synonym", + "frsA" + ], + [ + "gene_synonym", + "yafA" + ] + ], + "dna_sequence": "ATGACACAGGCAAACCTGAGCGAAACCCTGTTCAAACCCCGCTTTAAACATCCTGAAACCTCGACGCTAGTCCGCCGCTTTAATCACGGCGCACAACCGCCTGTGCAGTCGGCCCTTGATGGTAAAACCATCCCTCACTGGTATCGCATGATTAACCGTCTGATGTGGATCTGGCGCGGCATTGACCCACGCGAAATCCTCGACGTCCAGGCACGTATTGTGATGAGCGATGCCGAACGTACCGACGATGATTTATACGATACGGTGATTGGCTACCGTGGCGGCAACTGGATTTATGAGTGGGCCACCCAGGCGATGGTGTGGCAACAAAAAGCCTGTGCGGAAGACGATCCGCAACTCAGTGGTCGTCACTGGCTGCATGCGGCTACGTTGTACAACATTGCCGCCTATCCTCATCTGAAAGGAGATGACCTGGCCGAGCAAGCGCAGGCTTTGTCAAACCGCGCCTATGAAGAGGCCGCTCAGCGTCTACCGGGCACGATGCGGCAGATGGAGTTTACCGTACCCGGCGGTGCGCCCATCACCGGCTTTTTGCATATGCCGAAAGGCGATGGCCCGTTCCCGACGGTATTAATGTGTGGTGGTCTGGATGCGATGCAGACGGACTATTACAGCCTGTATGAACGTTATTTTGCGCCGCGCGGCATTGCGATGCTGACTATTGATATGCCGTCGGTGGGCTTTTCTTCAAAATGGAAGCTCACCCAGGACTCCAGCCTGTTGCATCAGCACGTCTTAAAGGCGCTGCCTAACGTACCGTGGGTGGATCACACTCGCGTCGCGGCCTTTGGTTTCCGTTTCGGCGCTAACGTTGCCGTGCGTCTGGCATACCTTGAATCGCCGCGTCTGAAAGCGGTTGCCTGTCTTGGTCCGGTAGTTCATACCCTGTTGAGTGATTTTAAGTGCCAGCAACAGGTGCCGGAAATGTATCTTGACGTTCTGGCCAGTCGTTTGGGGATGCATGATGCTTCCGATGAAGCGTTGCGCGTGGAGCTGAATCGCTATTCATTAAAAGTGCAAGGATTGCTGGGACGTCGCTGCCCAACGCCAATGTTATCAGGCTACTGGAAGAACGATCCGTTCAGCCCGGAAGAGGACTCACGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAA", + "dna_sequence_length": 1245, + "functions": [ + "fermentation-respiration switch protein", + "PTS Enzyme IIA(Glc)-binding protein", + "pNP-butyrate esterase activity" + ], + "id": "CDS_230", + "location": [ + [ + "NC_000913", + 256527, + "+", + 1245 + ] + ], + "md5": "c5edeec741adfcff60695b5135e85853", + "parent_gene": "", + "protein_md5": "d6715aa924bfc0281640a5050fd2fa36", + "protein_translation": "MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEDDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC", + "protein_translation_length": 414, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000821" + ], + [ + "gene_synonym", + "ECK0241" + ], + [ + "gene_synonym", + "EcoGene:EG11092" + ], + [ + "gene_synonym", + "GeneID:945077" + ], + [ + "gene_synonym", + "JW0230" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24251" + ], + [ + "gene_synonym", + "b0240" + ], + [ + "gene_synonym", + "crl" + ] + ], + "dna_sequence": "ATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGAAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGA", + "dna_sequence_length": 402, + "id": "CDS_231", + "location": [ + [ + "NC_000913", + 257829, + "+", + 71 + ], + [ + "NC_000913", + 258676, + "+", + 331 + ] + ], + "md5": "f6cc46cda3db482cf261efa371a888ca", + "parent_gene": "", + "protein_md5": "214b4b54f12329f8906ac58e750461cd", + "protein_translation": "MTLPSGHPKSRLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEPADDFRDEPVKLTA", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000823" + ], + [ + "gene_synonym", + "ECK0242" + ], + [ + "gene_synonym", + "EcoGene:EG10729" + ], + [ + "gene_synonym", + "GI:16128227" + ], + [ + "gene_synonym", + "GeneID:944926" + ], + [ + "gene_synonym", + "JW0231" + ], + [ + "gene_synonym", + "NP_414776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02932" + ], + [ + "gene_synonym", + "b0241" + ], + [ + "gene_synonym", + "ompE" + ], + [ + "gene_synonym", + "phoE" + ] + ], + "dna_sequence": "ATGAAAAAGAGCACTCTGGCATTAGTGGTGATGGGCATTGTGGCATCTGCATCTGTACAGGCTGCAGAAATATATAATAAAGACGGTAATAAACTGGATGTCTATGGCAAAGTTAAAGCCATGCATTATATGAGTGATAACGCCAGTAAAGATGGCGACCAGAGTTATATCCGTTTTGGTTTCAAAGGCGAAACACAAATTAACGATCAACTGACTGGTTATGGTCGTTGGGAAGCAGAGTTTGCCGGTAATAAAGCAGAGAGTGATACTGCACAGCAAAAAACGCGTCTCGCTTTTGCCGGGTTGAAATATAAAGATTTGGGTTCTTTCGATTATGGTCGTAACCTGGGGGCGTTGTATGACGTGGAAGCCTGGACCGATATGTTCCCGGAATTTGGTGGCGATTCCTCGGCGCAGACCGACAACTTTATGACCAAACGCGCCAGCGGTCTGGCGACGTATCGGAACACCGACTTCTTCGGCGTTATCGATGGCCTGAACTTAACCCTGCAATATCAAGGGAAAAACGAAAACCGCGACGTTAAAAAGCAAAACGGCGATGGCTTCGGCACGTCATTGACATATGACTTTGGCGGCAGCGATTTCGCCATTAGTGGGGCCTATACCAACTCAGATCGCACCAACGAGCAGAACCTGCAAAGCCGTGGCACAGGCAAGCGTGCAGAAGCATGGGCAACAGGTCTGAAATACGATGCCAATAATATTTATCTGGCAACTTTCTATTCTGAAACACGCAAAATGACGCCAATAACTGGCGGCTTTGCCAATAAGACACAGAACTTTGAAGCGGTCGCTCAATACCAGTTTGACTTTGGTCTGCGTCCATCGCTGGGTTATGTCTTATCGAAAGGGAAAGATATTGAAGGTATCGGTGATGAAGATCTGGTCAATTATATCGACGTCGGTGCTACGTATTATTTCAACAAAAATATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGTTGGCATGACGTATCAGTTTTAA", + "dna_sequence_length": 1056, + "functions": [ + "outer membrane phosphoporin protein E" + ], + "id": "CDS_232", + "location": [ + [ + "NC_000913", + 260100, + "-", + 1056 + ] + ], + "md5": "9c19a7f5e3c950976667623c329d036a", + "parent_gene": "", + "protein_md5": "452448727b2c894066601a1370c6f052", + "protein_translation": "MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF", + "protein_translation_length": 351, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000830" + ], + [ + "gene_synonym", + "ECK0243" + ], + [ + "gene_synonym", + "EcoGene:EG10768" + ], + [ + "gene_synonym", + "GI:16128228" + ], + [ + "gene_synonym", + "GeneID:946425" + ], + [ + "gene_synonym", + "JW0232" + ], + [ + "gene_synonym", + "NP_414777.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7B5" + ], + [ + "gene_synonym", + "b0242" + ], + [ + "gene_synonym", + "pro" + ], + [ + "gene_synonym", + "proB" + ] + ], + "dna_sequence": "ATGAGTGACAGCCAGACGCTGGTGGTAAAACTCGGCACCAGTGTGCTAACAGGCGGATCGCGCCGTCTGAACCGTGCCCATATCGTTGAACTTGTTCGCCAGTGCGCGCAGTTACATGCCGCCGGGCATCGGATTGTTATTGTGACGTCGGGCGCGATCGCCGCCGGACGTGAGCACCTGGGTTACCCGGAACTGCCAGCGACCATCGCCTCGAAACAACTGCTGGCGGCGGTAGGGCAGAGTCGACTGATTCAACTGTGGGAACAGCTGTTTTCGATTTATGGCATTCACGTCGGGCAAATGCTGCTGACCCGTGCTGATATGGAAGACCGTGAACGCTTCCTGAACGCCCGCGACACCCTGCGAGCGTTGCTCGATAACAATATCGTTCCGGTAATCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCACGGTAGATGAAGGGGCAACTGCCGCCATTCTGGAACGCGGCAGCTCCCTGTTGCCGAAAGGCATTAAAAGCGTGACTGGCAATTTCTCGCGTGGTGAAGTCATCCGCATTTGCAACCTCGAAGGCCGCGATATCGCCCACGGCGTCAGTCGTTACAACAGCGATGCATTACGCCGTATTGCCGGACACCACTCGCAAGAAATTGATGCAATACTGGGATATGAATACGGCCCGGTTGCCGTTCACCGTGATGACATGATTACCCGTTAA", + "dna_sequence_length": 1104, + "functions": [ + "gamma-glutamate kinase" + ], + "id": "CDS_233", + "location": [ + [ + "NC_000913", + 260388, + "+", + 1104 + ] + ], + "md5": "295cc0a94eb37bf52ce185ed07ad9998", + "parent_gene": "", + "protein_md5": "13119f177bb40251c69d693b6a942708", + "protein_translation": "MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000832" + ], + [ + "gene_synonym", + "ECK0244" + ], + [ + "gene_synonym", + "EcoGene:EG10767" + ], + [ + "gene_synonym", + "GI:16128229" + ], + [ + "gene_synonym", + "GeneID:946680" + ], + [ + "gene_synonym", + "JW0233" + ], + [ + "gene_synonym", + "NP_414778.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07004" + ], + [ + "gene_synonym", + "b0243" + ], + [ + "gene_synonym", + "pro" + ], + [ + "gene_synonym", + "proA" + ] + ], + "dna_sequence": "ATGCTGGAACAAATGGGCATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTGACGCCCGCACGGCTGAAAGGCATTGCCGACGATGTACGTCAGGTGTGCAACCTCGCCGATCCGGTGGGGCAGGTAATCGATGGCGGCGTACTGGACAGCGGCCTGCGTCTTGAGCGTCGTCGCGTACCGCTGGGGGTTATTGGCGTGATTTATGAAGCGCGCCCGAACGTGACGGTTGATGTCGCTTCGCTGTGCCTGAAAACCGGTAATGCGGTGATCCTGCGCGGTGGCAAAGAAACGTGTCGCACTAACGCTGCAACGGTGGCGGTGATTCAGGACGCCCTGAAATCCTGCGGCTTACCGGCGGGTGCCGTGCAGGCGATTGATAATCCTGACCGTGCGCTGGTCAGTGAAATGCTGCGTATGGATAAATACATCGACATGCTGATCCCGCGTGGTGGCGCTGGTTTGCATAAACTGTGCCGTGAACAGTCGACAATCCCGGTGATCACAGGTGGTATAGGCGTATGCCATATTTACGTTGATGAAAGTGTAGAGATCGCTGAAGCATTAAAAGTGATCGTCAACGCGAAAACTCAGCGTCCGAGCACATGTAATACGGTTGAAACGTTGCTGGTGAATAAAAACATCGCCGATAGCTTCCTGCCCGCATTAAGCAAACAAATGGCGGAAAGCGGCGTGACATTACACGCAGATGCAGCTGCACTGGCGCAGTTGCAGGCAGGCCCTGCGAAGGTGGTTGCTGTTAAAGCCGAAGAGTATGACGATGAGTTTCTGTCATTAGATTTGAACGTCAAAATCGTCAGCGATCTTGACGATGCCATCGCCCATATTCGTGAACACGGCACACAACACTCCGATGCGATCCTGACCCGCGATATGCGCAACGCCCAGCGTTTTGTTAACGAAGTGGATTCGTCCGCTGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAA", + "dna_sequence_length": 1254, + "functions": [ + "gamma-glutamylphosphate reductase" + ], + "id": "CDS_234", + "location": [ + [ + "NC_000913", + 261503, + "+", + 1254 + ] + ], + "md5": "41db270a156c9f826afc3bef98e9d122", + "parent_gene": "", + "protein_md5": "e465935ff61a153e054214ab25c51637", + "protein_translation": "MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4458" + ], + [ + "gene_synonym", + "EcoGene:EG14454" + ], + [ + "gene_synonym", + "GeneID:5625552" + ], + [ + "gene_synonym", + "b4626" + ], + [ + "gene_synonym", + "ykfN" + ] + ], + "dna_sequence": "ATGCAACCAGAAGTTGAAGTATTAACCGATCATAATGAGCTAATTTGTTCGAGCTTTATTGAA", + "dna_sequence_length": 63, + "id": "CDS_235", + "location": [ + [ + "NC_000913", + 263212, + "-", + 63 + ] + ], + "md5": "c5fe4d4911e1a1620ce84e1543e05edc", + "parent_gene": "", + "protein_md5": "2d544530374805dd10c835f9f318ca9e", + "protein_translation": "MQPEVEVLTDHNELICSSFIE", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000836" + ], + [ + "gene_synonym", + "ECK0246" + ], + [ + "gene_synonym", + "EcoGene:EG14333" + ], + [ + "gene_synonym", + "GI:16128230" + ], + [ + "gene_synonym", + "GeneID:946726" + ], + [ + "gene_synonym", + "JW0234" + ], + [ + "gene_synonym", + "NP_414779.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77692" + ], + [ + "gene_synonym", + "b0245" + ], + [ + "gene_synonym", + "ykfI" + ] + ], + "dna_sequence": "ATGAAAACTTTACCTGCAATAACTCAGCGGGCGGTGAAGCCCTGCCTGTCACCCGTGGCTGTCTGGCAAATGTTACTGACACGTCTGCTGGAACAGCACTATGGTCTGACAATAAACGACACGCCATTCTGCAATGAGGCTGTGATTAAGGAACACATCGATGCCGGTATCACCCTAGCCGATGCCGTGAATTTTCTGGTAGAAAAATACGAGCTGGTTCGTATCGACAGGAAGGGATTTAGCTGGCAGGAACAATCTCCTTATCTCCGGGCTGCAGACATTCTGCGAGCGCGGCAGGCAACTGGCTTGTTGCGGCAAAGCCGTAACAACGTAGTACGATGA", + "dna_sequence_length": 342, + "functions": [ + "CP4-6 prophage", + "toxin of the YkfI-YafW toxin-antitoxin system" + ], + "id": "CDS_236", + "location": [ + [ + "NC_000913", + 263669, + "-", + 342 + ] + ], + "md5": "b5bfa44614e841fe5a1762dbd4b0f883", + "parent_gene": "", + "protein_md5": "07e71f6d32adcd3d7962aafbdb25f965", + "protein_translation": "MKTLPAITQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFCNEAVIKEHIDAGITLADAVNFLVEKYELVRIDRKGFSWQEQSPYLRAADILRARQATGLLRQSRNNVVR", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000838" + ], + [ + "gene_synonym", + "ECK0247" + ], + [ + "gene_synonym", + "EcoGene:EG13335" + ], + [ + "gene_synonym", + "GI:16128231" + ], + [ + "gene_synonym", + "GeneID:944929" + ], + [ + "gene_synonym", + "JW0235" + ], + [ + "gene_synonym", + "NP_414780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47684" + ], + [ + "gene_synonym", + "b0246" + ], + [ + "gene_synonym", + "yafW" + ] + ], + "dna_sequence": "ATGAGCAACCCTACCAGGGGCCTGCAGCGGGAGATTACACTGCGCCTGGGAGCCCGTCTGGTGCAGGAAGGCAACCGACTGCATTATCTGGCTGACCGGGCCAGCATCACCGGCAAGTTCAGTGACATCGAATGCCGGAAGCTGGATGAAACATTCCCGCACTTTATCCTCCAGATGGAATCGATGCTGACCACCGGTGAACTCAGCCCCCACCATGCCCACTGCGTTACCCTGTACCACAACGATTTAACCTGCGAAGCCGACACCCTTGGCAGTTGCGGCTACGTATACATCGCCATTTACCCCACTCAGCGTTAA", + "dna_sequence_length": 318, + "functions": [ + "CP4-6 prophage", + "antitoxin of the YkfI-YafW toxin-antitoxin system" + ], + "id": "CDS_237", + "location": [ + [ + "NC_000913", + 264007, + "-", + 318 + ] + ], + "md5": "03ca15f3b99e7bdc87a189708233c5d7", + "parent_gene": "", + "protein_md5": "d5b020bf2fce7e5a3b5a4f6d37dd224b", + "protein_translation": "MSNPTRGLQREITLRLGARLVQEGNRLHYLADRASITGKFSDIECRKLDETFPHFILQMESMLTTGELSPHHAHCVTLYHNDLTCEADTLGSCGYVYIAIYPTQR", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285025" + ], + [ + "gene_synonym", + "ECK0248" + ], + [ + "gene_synonym", + "EcoGene:EG14332" + ], + [ + "gene_synonym", + "GI:94541094" + ], + [ + "gene_synonym", + "GeneID:1450236" + ], + [ + "gene_synonym", + "JW5956" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q9XB42" + ], + [ + "gene_synonym", + "YP_588435.1" + ], + [ + "gene_synonym", + "b4504" + ], + [ + "gene_synonym", + "ykfH" + ] + ], + "dna_sequence": "ATGAAAATTATCAGTAAACGCAGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGCAAATACCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGACGTTCCGGATATCGCCGGAGTCCTCGCGGTATACGCCGAACGCCGCCAGGACCGCAATGGGCCCTATACCTGCCTGATGAGCATCACCCTGAACTGA", + "dna_sequence_length": 222, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_238", + "location": [ + [ + "NC_000913", + 264247, + "-", + 222 + ] + ], + "md5": "b5e7b5020f6c5c260386ea8465ee7c95", + "parent_gene": "", + "protein_md5": "a03b415cd3dfe9e6162f95187659ce03", + "protein_translation": "MKIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVPDIAGVLAVYAERRQDRNGPYTCLMSITLN", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000841" + ], + [ + "gene_synonym", + "ECK0249" + ], + [ + "gene_synonym", + "EcoGene:EG14331" + ], + [ + "gene_synonym", + "GI:16128232" + ], + [ + "gene_synonym", + "GeneID:944930" + ], + [ + "gene_synonym", + "JW0236" + ], + [ + "gene_synonym", + "NP_414781.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47685" + ], + [ + "gene_synonym", + "b0247" + ], + [ + "gene_synonym", + "ykfG" + ] + ], + "dna_sequence": "ATGAAACAGCTTTCCTTTTTACCCGGCGAGATGACGCCACAGGACCGGCGTCTCATTCAGCGGGCGCTCAGGGCTCTGGACCGCCACCTGCATGAGCCCGGCGTAGCCTTCACCTCTACCCACGCCGTACGTGAATGGCTGCGACTGCATATGGCCGCGCTTGAGCGGGAAGAGTTCCGGGTGTTGTATCTGGACAACCAGAATCAGTTGATTGCCCATGAAACGCTCTTCACCGGCACGATTAACCGCACCGAGGTGCATCCCCGGGAGGTGGTCAAACGTGCTCTGCACTTCAACGCGGCGGCGGTGATACTCGCGCATAACCATCCTTCCGGCGAGACGACACCTAGCCAGGCCGACAAAACCCTCACGCAGCGACTGGTTCAGGTGCTTCAGCTGGTGGATATCCGTGTCCCTGACCATCTGATTGTCGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGA", + "dna_sequence_length": 477, + "functions": [ + "CP4-6 prophage", + "RadC-like JAB domain protein" + ], + "id": "CDS_239", + "location": [ + [ + "NC_000913", + 264732, + "-", + 477 + ] + ], + "md5": "1eb783ebf51e22ddd57a5202871a1752", + "parent_gene": "", + "protein_md5": "6b46b5f8ab183a56d32d7ac01df3bea9", + "protein_translation": "MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000843" + ], + [ + "gene_synonym", + "ECK0250" + ], + [ + "gene_synonym", + "EcoGene:EG13336" + ], + [ + "gene_synonym", + "GI:16128233" + ], + [ + "gene_synonym", + "GeneID:944931" + ], + [ + "gene_synonym", + "JW5022" + ], + [ + "gene_synonym", + "NP_414782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75676" + ], + [ + "gene_synonym", + "b0248" + ], + [ + "gene_synonym", + "yafX" + ] + ], + "dna_sequence": "ATGACAACACAGACGCAGCACGACCTCGCACCCGCTAACCAACCCGAATTTGAACTGACCGTCACGCCGGTCCCCGATGAACAGCGTATCGATTTCTGGCCACAGTACTTTGGCGCTATCCCGCAGTGGCTACTCCTGGAGCCGCATATCTTCGCCTGGATGGACCGCTTCTGTGAGGGCTACAGCGGTGGTATCTGGTCGTTCTACACCCTCAGCAATGGCGGCGCATTTATGTCCCCCGAGCCTGACAACGATGAGACATGGCGTCTGTTTAACTGCCTGAACGGTAACGATGCCCAAATGAGTGCAGAAGCAGCAGGTATTGCTGTCTGCCTGATTGCGTATAGCCACCATGCCTGCCGTACAGAATGTGACGCGATGACCGCACACTATTACCGCCTGCGGGAGTATGCCATGCAACATCCAGAGGCTCACGCCATTCTGCGTATTATCGACTGA", + "dna_sequence_length": 459, + "functions": [ + "CP4-6 prophage", + "uncharacterized protein" + ], + "id": "CDS_240", + "location": [ + [ + "NC_000913", + 265206, + "-", + 459 + ] + ], + "md5": "6090efd00a877adcc4da6583f541c777", + "parent_gene": "", + "protein_md5": "6e62232820cc09bd02fcdeb51c39bbb3", + "protein_translation": "MTTQTQHDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWLLLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFMSPEPDNDETWRLFNCLNGNDAQMSAEAAGIAVCLIAYSHHACRTECDAMTAHYYRLREYAMQHPEAHAILRIID", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000846" + ], + [ + "gene_synonym", + "ECK0251" + ], + [ + "gene_synonym", + "EcoGene:EG14283" + ], + [ + "gene_synonym", + "GI:16128234" + ], + [ + "gene_synonym", + "GeneID:948839" + ], + [ + "gene_synonym", + "JW5023" + ], + [ + "gene_synonym", + "NP_414783.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75677" + ], + [ + "gene_synonym", + "b0249" + ], + [ + "gene_synonym", + "ykfF" + ] + ], + "dna_sequence": "ATGACCCAATCCGTGTTGCTGCCACCGGGGCCTTTCACCCGGAGACAAGCGCAAGCGGTCACTACCACGTACAGCAATATCACACTCGAAGACGACCAGGGCAGTCACTTCCGTCTGGTGGTTCGTGATACTGAAGGCCGGATGGTCTGGCGGGCATGGAACTTTGAGCCGGATGCCGGTGAAGGTCTTAACCGCTATATCCGCACCTCAGGCATCCGTACAGACACGGCCACCCGCTGA", + "dna_sequence_length": 240, + "functions": [ + "CP4-6 prophage", + "uncharacterized protein" + ], + "id": "CDS_241", + "location": [ + [ + "NC_000913", + 265543, + "-", + 240 + ] + ], + "md5": "023b40a4b7ff1bc65e8ddcfd5dce1ee6", + "parent_gene": "", + "protein_md5": "af7ef3f3a8f1152aee47cb0f35204135", + "protein_translation": "MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000851" + ], + [ + "gene_synonym", + "ECK0252" + ], + [ + "gene_synonym", + "EcoGene:EG13548" + ], + [ + "gene_synonym", + "GI:16128235" + ], + [ + "gene_synonym", + "GeneID:946846" + ], + [ + "gene_synonym", + "JW0239" + ], + [ + "gene_synonym", + "NP_414784.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77162" + ], + [ + "gene_synonym", + "b0250" + ], + [ + "gene_synonym", + "ykfB" + ] + ], + "dna_sequence": "ATGACAATACTTTCACTAAGTCGGTTTATGCTGGCGGGTGTACTGCTCGCGAGCTTTAATGCCTCTGCTATCCCGGGGTTCTGGCAGCAGGGTTACGGTCAGGGCAATACGGAATACAGCGTGACCGAAGCCAGCGGAAAGACGTTTACCATCAACTGCACAGGGAACCCGGACCAGAATGGTTTCTATCAGCATTCAGTCTTTCTTACCCTTGCCGATGACAAGATGGTCAGTTCGCACGATGACGACACTACTATCACCGTAGTGATGGATCACCAGCAGTACATTATTCCGTCCAGCCTGGGCTGGCGTAACGGCGATAACGCCTGGTTTGACTTCATCAGCAATATCTCTGAGGCCGGGCAGTTCGACGTCTACGTCAATGACCACAAAGCAGGGACCTTCACTGCGGACCGGAAGAACGCTGAGAAAGTTCTGTCCACTCTCGGAGACTGCAGCAACGACTGA", + "dna_sequence_length": 468, + "functions": [ + "CP4-6 prophage", + "uncharacterized protein" + ], + "id": "CDS_242", + "location": [ + [ + "NC_000913", + 266087, + "-", + 468 + ] + ], + "md5": "f3d1f2536d06329d1afdc1323b7f0ee1", + "parent_gene": "", + "protein_md5": "ac49c39c84f6b9f2b135c73321ff0041", + "protein_translation": "MTILSLSRFMLAGVLLASFNASAIPGFWQQGYGQGNTEYSVTEASGKTFTINCTGNPDQNGFYQHSVFLTLADDKMVSSHDDDTTITVVMDHQQYIIPSSLGWRNGDNAWFDFISNISEAGQFDVYVNDHKAGTFTADRKNAEKVLSTLGDCSND", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000853" + ], + [ + "gene_synonym", + "ECK0253" + ], + [ + "gene_synonym", + "EcoGene:EG13337" + ], + [ + "gene_synonym", + "GI:145698221" + ], + [ + "gene_synonym", + "GeneID:944934" + ], + [ + "gene_synonym", + "JW0240" + ], + [ + "gene_synonym", + "NP_414785.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77365" + ], + [ + "gene_synonym", + "b0251" + ], + [ + "gene_synonym", + "yafY" + ] + ], + "dna_sequence": "ATGAAACGTAAAACACTGCCTCTGCTGGCGCTGGTTGCCACCACTCTGTTTCTCATCGCATGCGATGACAGAAGTGATGACCTGAAGGCCATCAGTAAATTTAAGGACCTCACCCCACCGCGTTTCAGTGATGTGGTCAGCCACCAGGATGATGTCAGCGAAGAATGGTCACAGGTTGACTACTTATCCGGTCCCACCTTGCAGGTTTTACGTACCCGCCAGTCGCCCGATGGCTGCGAGGATGGCAGTTACTACTACCTCGTGGATATGCAGGAAAAAACCGTCCAGCCACTGATGAATGCGCTGTGTATTGCCGATAACATCAAACTGGAATACCAGGAGGTGACGGACCCGTATACCAAAGAAAAATACTTTGAGTACGCCCATGACGGCAAACTGATGGGGCAGCTACTGATACCCTCGAACCCTGACAATCAGGAATAA", + "dna_sequence_length": 444, + "functions": [ + "lipoprotein, inner membrane", + "degP regulator", + "CP4-6 prophage" + ], + "id": "CDS_243", + "location": [ + [ + "NC_000913", + 266553, + "-", + 444 + ] + ], + "md5": "4e6b3d29518e73ab14c8aaef48c8ca92", + "parent_gene": "", + "protein_md5": "fb84b81ac66c6584d837ef73c07b92c4", + "protein_translation": "MKRKTLPLLALVATTLFLIACDDRSDDLKAISKFKDLTPPRFSDVVSHQDDVSEEWSQVDYLSGPTLQVLRTRQSPDGCEDGSYYYLVDMQEKTVQPLMNALCIADNIKLEYQEVTDPYTKEKYFEYAHDGKLMGQLLIPSNPDNQE", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4445" + ], + [ + "gene_synonym", + "EcoGene:EG14378" + ], + [ + "gene_synonym", + "GeneID:5625553" + ], + [ + "gene_synonym", + "b4627" + ], + [ + "gene_synonym", + "ykfL" + ] + ], + "dna_sequence": "ATTATCGCCATTGTTGTCATCGTCATCATTCTGAACAAAACCGGGGTGTCCGACAGTCTCGCGGCCCTGACCCTTGCCACTGTTGCCGCACTGCTGACGGGAGGTGGCGCAGCCGGTGCTGCCAGTGTCGCGCTGACACCGTTCGTCGGCGTGCCGGTGGGTATTTTCGTGGGCATTTATGTCTTTGCCAAAGTGGTTCGTCTGATTTCAGGAAAAAAATAA", + "dna_sequence_length": 222, + "id": "CDS_244", + "location": [ + [ + "NC_000913", + 266774, + "-", + 222 + ] + ], + "md5": "e04441595b71fd2d3086ce86ccc6f3a0", + "parent_gene": "", + "protein_md5": "fed76ec5598091eb942ac37561cb01f7", + "protein_translation": "IIAIVVIVIILNKTGVSDSLAALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4444" + ], + [ + "gene_synonym", + "EcoGene:EG14377" + ], + [ + "gene_synonym", + "GeneID:5625554" + ], + [ + "gene_synonym", + "b4628" + ], + [ + "gene_synonym", + "yafY" + ], + [ + "gene_synonym", + "ykfK" + ] + ], + "dna_sequence": "ATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTGGCAGGGGAAACGCTGAGTGTGCGTAAGCTTGCCGCTGAGTTTGGTGTGTCGGTGCGCACGCTGCGGCGTGATTTTCGTGAGCGGCTGATGTATCTGGACCTGGAGTATCAGTCCGGATATTGC", + "dna_sequence_length": 192, + "id": "CDS_245", + "location": [ + [ + "NC_000913", + 266967, + "-", + 192 + ] + ], + "md5": "c037b9ba013f4103be6f6231a8b23b31", + "parent_gene": "", + "protein_md5": "7edbe39071456092b4f378e1f2eb1df6", + "protein_translation": "MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQSGYC", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000856" + ], + [ + "gene_synonym", + "ECK0254" + ], + [ + "gene_synonym", + "EcoGene:EG13338" + ], + [ + "gene_synonym", + "GI:90111102" + ], + [ + "gene_synonym", + "GeneID:945373" + ], + [ + "gene_synonym", + "JW0242" + ], + [ + "gene_synonym", + "NP_414786.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77206" + ], + [ + "gene_synonym", + "b0252" + ], + [ + "gene_synonym", + "yafZ" + ] + ], + "dna_sequence": "ATGACCCGTCTGGCTTCGCGCTTTGGCGCAGCAAACCTTATCCGTCGCGACCGTCCGTTAACCCGTGAAGAGCTGTTTCGCGTAGTGCCCAGTGTATTCAGTGAGGACAAACACGAGTCCCGTAGTGAGCGTTATACCTATATACCCACCATCTCCCTGCTCGACAGCCTACAGCGAGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACCCGCGTGCGTGACCCGGGTCGTCGTGAACATACAAAGCATATGCTGCGTCTGCGGCGGGAAGGGCAGATCACCGGTAAACAGGTGCCGGAAATTATTCTACTCAACTCTCACGATGGAACCAGTTCGTATCAGATGTTGCCGGGACTATTTCGTGCGGTTTGTCAGAACGGGCTCGTCTGCGGTGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGACGTGGTGAGTCAGGTGATTGAAGGCGCGTATGAGGTGCTGGGGATTTTTGACCGGGTGGAGGAGAAACGGGATGCCATGCAGTCGTTGCTGTTGCCACCCCCGGCACAGCAGGCACTGGCAAAAGCCGCCCTCACATACCGCTTTGGTGAAGACCACCAGCCGGTGACTGAATCGCAGATCCTCTCCCCTCGCCGCTGGCAGGATGAGAGCAATGACCTGTGGACCACGTACCAGCGTATTCAGGAGAACCTGATTAAGGGCGGGCTCAGTGGCCGTAATGCCAAAGGAGGACGGTCACATACCCGTGCCGTTCGCGGTATCGACGGGGACGTGAAACTTAACCGGGCACTGTGGGTGATGGCGGAAGCCCTGCTCACGCAACTGCAGTGA", + "dna_sequence_length": 822, + "functions": [ + "CP4-6 prophage", + "conserved protein" + ], + "id": "CDS_246", + "location": [ + [ + "NC_000913", + 268005, + "-", + 822 + ] + ], + "md5": "31147f733364c323edf9f11d1f2ceed0", + "parent_gene": "", + "protein_md5": "bef8807ebad49fb4b437afd99979e565", + "protein_translation": "MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKGGRSHTRAVRGIDGDVKLNRALWVMAEALLTQLQ", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000858" + ], + [ + "gene_synonym", + "ECK0255" + ], + [ + "gene_synonym", + "EcoGene:EG13339" + ], + [ + "gene_synonym", + "GI:90111103" + ], + [ + "gene_synonym", + "GeneID:949004" + ], + [ + "gene_synonym", + "JW0243" + ], + [ + "gene_synonym", + "NP_414787.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75678" + ], + [ + "gene_synonym", + "b0253" + ], + [ + "gene_synonym", + "ykfA" + ] + ], + "dna_sequence": "ATGAATAATTCTGAAGGTTTGAAGTCGTTTCAGCAATCGCTTGCTGATCTGCCGCAATGGGTATCAGAGCGGCTTCTGCAGCAAATTAACCAGTTAACTAACTACGAGCCAGTGATCGGCATTATGGGTAAAACCGGTGTTGGGAAGAGCAGTCTGTGCAATGCCCTGTTTGCCGGAGATATATCACCGGTCAGCGATGTGGCGGCCTGTACACGTGAGCCACTGCGCTTTCGCCTGCAAGTCGGCGACCGCTATATAACGCTGATGGATCTGCCCGGCGTGGGCGAAAGTGGCGCTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAGCTTCCTCGCCTCGACCTGGTACTGTGGCTGATTAAGGCCGATGACCGGGCGCTGACGGTGGATGAACATTTTTATCATCAGGTGATTGGAGAGGTATACCGGCATAAGGTGCTGTTTGTTATCAGCCAGTCGGATAAGGCCGAACCTACCAGCGGTGGGGGACAGTTGTCCACGGCGCAGAAGCAGAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTGTTCCAGCCCGTCCATCCGGTGTGTGCTGTGTCGGTCCGTCTACAATGGGGGCTTAAGGTGATGGCCGAGCGGATGATTAAGTGCCTGCCACGTGAGGCCACCAGCCCGGTGGTGTCGCAACTCCATCCTTCCTTTCGCACGACGGTAGTCCGGGAACAGGCTCGTAGCGATTTTGGTGAAACCGTCGGGGCCGTACTCGATAGCATCAGTGCCTTTCCCCTGATACCCGCCCCGGTGCGGGCCGTCATTCAGGCCGTGCGCACCACGGTGGTGTCAGTGGCCCGCGCCGTCTGGGATTTCTTCTTCTGA", + "dna_sequence_length": 864, + "functions": [ + "CP4-6 prophage", + "putative GTP-binding protein" + ], + "id": "CDS_247", + "location": [ + [ + "NC_000913", + 268960, + "-", + 864 + ] + ], + "md5": "896e5a9780cd86ddb7e7bf64a6c52c02", + "parent_gene": "", + "protein_md5": "0c864ca945765d649803c06dbd7c2786", + "protein_translation": "MNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAACTREPLRFRLQVGDRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAEPTSGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPREATSPVVSQLHPSFRTTVVREQARSDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVVSVARAVWDFFF", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000862" + ], + [ + "gene_synonym", + "ECK0256" + ], + [ + "gene_synonym", + "EcoGene:EG13340" + ], + [ + "gene_synonym", + "GI:16128239" + ], + [ + "gene_synonym", + "GeneID:945417" + ], + [ + "gene_synonym", + "JW0244" + ], + [ + "gene_synonym", + "NP_414788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q57083" + ], + [ + "gene_synonym", + "b0254" + ], + [ + "gene_synonym", + "perR" + ] + ], + "dna_sequence": "ATGAAGCTCTTAGCAAAAGCACCTCTAAATCTGTTACGCGCCTTTGAAGCGGCTGGTCGTACCGGAGCTTTTGCGTTGGCCGCCTCTGAGTTGGAACTGTCACCCAGTGCGATCAGCCATGCCATCCGCAAACTGGAAAACTTGCTTGATGTACGCCTTTTTCAGCGCAGTACGCGAGAAATTACGCTGACGAAAGAAGGTGAAATACTGCTTGAGCACATACAGCGGGGATTTAACGAATTACAGCAGGGGTTGGCATTAGTGACGGCTGATGAATCCAGGCCTTTGCGCCTTCATACTGCACCGAGTTTTGCCCATCAATGGCTTTTACCACGTCTTGGTAAGTTCATACGTGAGAACCCAAGCATCGATCTGCGACTTTCAGCCAGCACAGAATATGCACGTTTTGAACAGGATGATTTTGATCTCGATATAGTCTACGGTGAACCCCGCCCATCACCCTATGAGAAGATCCCGCTTGCTGTTGAAGAACTTACGCCACTGTGTTCTCCCCAACTGGCTGAGCGGCTAAAGAAACCAGAGGATCTCTATGCGTTGACATTGATTCAGTGCGATGTGCAGTTGTACCAGTGGAAAGGATGGTTTGAGGCGAATAAGATGACGCCACCCAATAATTATGGCCTTCGATTTGACCGTAGCTTTATGGCGATTGCTGCCGCAGTTGACGGCTTGGGAGTTGTGCTTGAATCAAAACTACTGGCTGAACGTGAAATCGCTAGCGGTAAACTGGTATGCCCACTTGTAAACAGTACCAGCGAAATACATTACATCGGTCATTATTTGGTTTTCCCCCAGCACCAACACATGCATTCTGCGCTTGATGTGTTCAAAACCTGGCTACTGAATGAACTCAATCTGGGTAAAATTCGTTGA", + "dna_sequence_length": 894, + "functions": [ + "CP4-6 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_248", + "location": [ + [ + "NC_000913", + 270182, + "-", + 894 + ] + ], + "md5": "a845e4499cc7a7cbd074e2b4b66e3697", + "parent_gene": "", + "protein_md5": "cc3107629bce64e85e26864682e7955a", + "protein_translation": "MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000867" + ], + [ + "gene_synonym", + "ECK0257" + ], + [ + "gene_synonym", + "EcoGene:EG40014" + ], + [ + "gene_synonym", + "GeneID:5061501" + ], + [ + "gene_synonym", + "ORFAB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75679" + ], + [ + "gene_synonym", + "b4587" + ], + [ + "gene_synonym", + "insN" + ], + [ + "gene_synonym", + "insN1" + ], + [ + "gene_synonym", + "insO" + ] + ], + "dna_sequence": "ATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATGGATGTCGGCCTTTCCACAATGACGCGATGGGTGAAACAATTACGTGATGAACGGCAGGGCAAAACACCAAAAGCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGCCACAATGGCAACCCAGAGAGGATACCAGATGGGGCGCTGGCTTGCTGGCAGACTCATGAAAGAGCTGGGGCTGGTCAGTTGCCAGCAGCCGACTCACCGGTATAAGCGTGGCGGTCATGAGCACGTTGCTATCCCGAATCATCTTGAGCGACAGTTCGCCGTAACGGAACCAAATCAGGTGTGGTGCGGTGATGTGACCTAT", + "dna_sequence_length": 684, + "id": "CDS_249", + "location": [ + [ + "NC_000913", + 270278, + "+", + 258 + ], + [ + "NC_000913", + 271764, + "+", + 426 + ] + ], + "md5": "2f8f5fcde1303e3727b6f4173e6b1a53", + "parent_gene": "", + "protein_md5": "d9454a02231ba5f0a5424c14b01ca889", + "protein_translation": "MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKRALDVRLPEQFSIIGKLRARYPVATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTY", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000871" + ], + [ + "gene_synonym", + "ECK0258" + ], + [ + "gene_synonym", + "EcoGene:EG40009" + ], + [ + "gene_synonym", + "GI:16128241" + ], + [ + "gene_synonym", + "GeneID:949005" + ], + [ + "gene_synonym", + "NP_414790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF88" + ], + [ + "gene_synonym", + "b0256" + ], + [ + "gene_synonym", + "insI1" + ] + ], + "dna_sequence": "ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGCGGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATAGCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGTTGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGCTTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAAACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACAGCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGATTTAGTCTCAGGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCGTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", + "dna_sequence_length": 1152, + "functions": [ + "IS30 transposase" + ], + "id": "CDS_250", + "location": [ + [ + "NC_000913", + 270603, + "+", + 1152 + ] + ], + "md5": "03b2d3a60045491f9481c10830f82a6f", + "parent_gene": "", + "protein_md5": "6fdab526a8f93608482b12881434c699", + "protein_translation": "MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIIVRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000885" + ], + [ + "gene_synonym", + "ECK0260" + ], + [ + "gene_synonym", + "EcoGene:EG13341" + ], + [ + "gene_synonym", + "GeneID:944940" + ], + [ + "gene_synonym", + "JW5813" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47688" + ], + [ + "gene_synonym", + "b0258" + ], + [ + "gene_synonym", + "ykfC" + ] + ], + "dna_sequence": "TTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGAATTACTCTCAGGCCACTACCAGCCCTTGCCCGCCAGACGGGTTTACATCCCTAAAAGCAACGGCAAACTGCGACCACTGGGTATCCCCGCGTTGCGGGATCGTATTGTTCAGCGGGCCATGCTGATGGCGATGGAGCCGATATGGGAGAGTGATTTTCATACGCTCTCATATGGCTTCCGGCCTGAGCGCAGTGTCCACCACGCGATCCGCACGGTGAAATTACAGCTCACAGACTGTGGTGAAACCCGGGGACGCTGGGTGATTGAAGGCGACCTGTCCAGTTACTTCGACACCGTACATCATCGACTGCTGATGAAGGCTGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGAGTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGTGGCGTACTGCCGCTATGCCGATGATTTTGTCCTCATCGTCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAATCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTAT", + "dna_sequence_length": 1108, + "id": "CDS_251", + "location": [ + [ + "NC_000913", + 272847, + "+", + 1108 + ] + ], + "md5": "faff4b84ae5a5798edfb8fd64dee51f8", + "parent_gene": "", + "protein_md5": "d03a9ed7228bed9841dd72a3fe54dad5", + "protein_translation": "LIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALL", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000888" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16128244" + ], + [ + "gene_synonym", + "GeneID:944941" + ], + [ + "gene_synonym", + "NP_414793.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE49" + ], + [ + "gene_synonym", + "b0259" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_252", + "location": [ + [ + "NC_000913", + 275117, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000893" + ], + [ + "gene_synonym", + "ECK0262" + ], + [ + "gene_synonym", + "EcoGene:EG13342" + ], + [ + "gene_synonym", + "GI:90111105" + ], + [ + "gene_synonym", + "GeneID:946284" + ], + [ + "gene_synonym", + "JW5027" + ], + [ + "gene_synonym", + "NP_414794.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47689" + ], + [ + "gene_synonym", + "b0260" + ], + [ + "gene_synonym", + "mmuP" + ], + [ + "gene_synonym", + "ykfD" + ] + ], + "dna_sequence": "ATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTCTGAATGTTATCTCCACGCGCTTTTTTGCCGAAGGGGAGTTCTGGTTCTCGCTGGTCAAAGTGGTCACTATCATCGCCTTTATCATCCTCGGTGGGGCGGCGATTTTCGGCTTTATTCCGATGCAGGATGGCTCGCCCGCGCCGGGGCTGAGTAATATCACGGCAGAAGGCTGGTTCCCGCACGGTGGCTTACCGATTTTGATGACTATGGTGGCAGTGAACTTTGCTTTTTCGGGTACCGAGCTTATCGGCATTGCCGCCGGTGAAACGGAAAACCCGCGCAAAGTTATCCCGGTAGCGATTCGTACTACCATCGCGCGACTGATTATTTTCTTTATCGGCACCGTGTTTGTGCTGGCAGCGCTGATCCCGATGCAGCAGGTGGGCGTGGAGAAAAGCCCGTTTGTGCTGGTATTTGAGAAAGTAGGGATCCCGTACGCCGCTGATATTTTTAACTTCGTGATCCTGACGGCTATTCTTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTGGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACAAGGTAAGGCATTGAGTGAATTACATTATCGCGCGCCGTGGTATCCGCTGGTGCCAGTATTAGGTTTTGTGCTGTGCCTGGTGGCCTGTGTTGGGCTGGCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAA", + "dna_sequence_length": 1404, + "functions": [ + "CP4-6 prophage", + "putative S-methylmethionine transporter" + ], + "id": "CDS_253", + "location": [ + [ + "NC_000913", + 275325, + "+", + 1404 + ] + ], + "md5": "274505236f67afb1fff9f3832d49a2c0", + "parent_gene": "", + "protein_md5": "229d48cee19620fc6440fe63232be376", + "protein_translation": "MQTTQQNAPLKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVWLVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSFTAAGFCMQYWFPQVPVWVWCVVFCAIIFGLNVISTRFFAEGEFWFSLVKVVTIIAFIILGGAAIFGFIPMQDGSPAPGLSNITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPRKVIPVAIRTTIARLIIFFIGTVFVLAALIPMQQVGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNERTLPACFARVTKNGVPLTALSVSMLGGVLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFVFRRRHLQQGKALSELHYRAPWYPLVPVLGFVLCLVACVGLAFDPAQRIALWCGLPFVALCYGAYFLTQPRNAKQEPEHVAE", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000895" + ], + [ + "gene_synonym", + "ECK0263" + ], + [ + "gene_synonym", + "EcoGene:EG13343" + ], + [ + "gene_synonym", + "GI:16128246" + ], + [ + "gene_synonym", + "GeneID:946143" + ], + [ + "gene_synonym", + "JW0253" + ], + [ + "gene_synonym", + "NP_414795.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47690" + ], + [ + "gene_synonym", + "b0261" + ], + [ + "gene_synonym", + "mmuM" + ], + [ + "gene_synonym", + "yagD" + ] + ], + "dna_sequence": "ATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATTGGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGCTCTGAATACCGTGGCGATTATCATTGTAGCGTTGAGGCATTTCAGGCGTTTCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGAACTCGGGCGAGCATTACGATGCCGTGAGCAAAACCTGGCATCATCACGGTGAACATTGCGCGCAGCTGGCGGATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGA", + "dna_sequence_length": 933, + "functions": [ + "CP4-6 prophage", + "S-methylmethionine:homocysteine methyltransferase" + ], + "id": "CDS_254", + "location": [ + [ + "NC_000913", + 276715, + "+", + 933 + ] + ], + "md5": "ff9548daad7d2175a549f82f17d905b1", + "parent_gene": "", + "protein_md5": "751787cd584546e973fc51dc472cdf67", + "protein_translation": "MSQNNPLRALLDKQDILLLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKARS", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000898" + ], + [ + "gene_synonym", + "ECK0264" + ], + [ + "gene_synonym", + "EcoGene:EG12340" + ], + [ + "gene_synonym", + "GI:90111106" + ], + [ + "gene_synonym", + "GeneID:947676" + ], + [ + "gene_synonym", + "JW0254" + ], + [ + "gene_synonym", + "NP_414796.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37009" + ], + [ + "gene_synonym", + "afuC" + ], + [ + "gene_synonym", + "b0262" + ], + [ + "gene_synonym", + "fbpC" + ], + [ + "gene_synonym", + "yagC" + ] + ], + "dna_sequence": "ATGACTCAGAAAAATTTCGTTGAACTGCGCAACGTCACTAAACGATTTGGCAGTAATACGGTAATCGACAATATCAACCTCACCATCCCGCAGGGGCAAATGGTGACGCTGCTCGGCCCGTCCGGCTGCGGCAAAACCACTATTTTGCGCCTGGTTGCCGGGCTGGAAAAACCGAGCGAAGGGCAAATTTTCATTGATGGCGAAGACGTCACCCATCGCTCTATTCAGCAGCGCGATATCTGTATGGTGTTTCAGTCCTATGCCCTGTTCCCGCATATGTCGCTGGGAGAGAATGTCGGTTATGGCCTGAAAATGCTCGGCGTACCGCGCGCAGAGCTGAAAGCCCGCGTCAAAGAGGCGTTGGCGATGGTGGATCTGGAAGGATTCGAAGACCGCTTTGTCGATCAGATCTCCGGCGGGCAGCAGCAGCGCGTGGCGCTGGCCCGCGCGCTGATCCTCAAGCCGAAAGTGCTGCTGTTTGATGAGCCGTTGAGTAACCTCGACGCCAACCTGCGTCGCAGCATGCGCGACAAGATCCGCGAGTTGCAAAAGCAGTTTGATATCACCTCGCTGTACGTCACCCACGATCAGAGCGAAGCCTTTGCGGTTTCTGATACTGTGCTGGTGATGAACAAGGGACACATCATGCAGATCGGCTCACCGCAGGATCTTTACCGCCAGCCCGCCTCCCGCTTTATGGCGAGCTTTATGGGCGATGCCAACCTGTTCCCGGCAACCTTCAGCGACGGATACGTTGATATCTACGGCTATCATCTGCCGCGCCCGCTGCACTTTGGTACACAGGGTGAAGGGATGGTCGGTGTGCGCCCGGAAGCGATCACGCTCAGCGATCGCGGCGAAGAGAGCCAGCGCTGCGTGATCCGCCATGTCGCCTATATGGGGCCGCAGTATGAAGTGACGGTGGAATGGCACGGGCAGGAGATATTATTGCAGGTCAACGCTACGCGTCTGCAACCGGACGTCGGCGAGCAGTATTATCTTGAAATCCATCCGTACGGCATGTTTGTTCTGGCGGATGCGGCATAA", + "dna_sequence_length": 1047, + "functions": [ + "CP4-6 prophage", + "putative ferric transporter subunit" + ], + "id": "CDS_255", + "location": [ + [ + "NC_000913", + 278802, + "-", + 1047 + ] + ], + "md5": "1986a0f2ada265307e052d604557a6e5", + "parent_gene": "", + "protein_md5": "2865d8897774e838bff4918974a69fa5", + "protein_translation": "MTQKNFVELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPLHFGTQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYMGPQYEVTVEWHGQEILLQVNATRLQPDVGEQYYLEIHPYGMFVLADAA", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000900" + ], + [ + "gene_synonym", + "ECK0265" + ], + [ + "gene_synonym", + "EcoGene:EG14277" + ], + [ + "gene_synonym", + "GeneID:947073" + ], + [ + "gene_synonym", + "JW0255" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75681" + ], + [ + "gene_synonym", + "afuB" + ], + [ + "gene_synonym", + "b0263" + ], + [ + "gene_synonym", + "fbpB" + ] + ], + "dna_sequence": "GGCCAAATCGATAAATCGCTCGATGAAGCCTCACTCAGCCTGCGCGCCGGTTCCCTGCGTACCATTACGCACATCCTGCTGCCGCTGCTGCGCCCGGCGATCCTCTCGGCGCTGATTTACAGCTTTGTGCGCGCCATTACCACCGTCAGCGCCATTGTGTTCCTCGTCACGCCGGATACCCGCGTAGCGACGGCTTACATCCTCAACCGCGTGGAAGATGGCGAATACGGTGTAGCGATTGCCTACGGTTCCATTCTGATCGTGGTGATGCTGGCGATTATTTTCATCTTTGACTGGCTGATCGGTGAATCACGTACCTCCCGTTCAAAAGCCAAAAACCAGGCGTAA", + "dna_sequence_length": 348, + "id": "CDS_256", + "location": [ + [ + "NC_000913", + 279161, + "-", + 348 + ] + ], + "md5": "dfa1a94e92aa1a9cc7293402c5629759", + "parent_gene": "", + "protein_md5": "898b16ebdaa7e7c864f7ed0dc95ecc0c", + "protein_translation": "GQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFIFDWLIGESRTSRSKAKNQA", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000906" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16128249" + ], + [ + "gene_synonym", + "GeneID:947698" + ], + [ + "gene_synonym", + "NP_414798.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF26" + ], + [ + "gene_synonym", + "b0264" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCAGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_257", + "location": [ + [ + "NC_000913", + 279681, + "-", + 504 + ] + ], + "md5": "b3b6d14e187a3d92aafdf329f45ef694", + "parent_gene": "", + "protein_md5": "7d37bc43f614740314039784eef22b64", + "protein_translation": "MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000909" + ], + [ + "gene_synonym", + "ECK4521" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16128250" + ], + [ + "gene_synonym", + "GeneID:944946" + ], + [ + "gene_synonym", + "NP_414799.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF08" + ], + [ + "gene_synonym", + "b0265" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_258", + "location": [ + [ + "NC_000913", + 279875, + "-", + 276 + ] + ], + "md5": "41231158e2773380f006f003f3c4ba9f", + "parent_gene": "", + "protein_md5": "27f7da6e06bb874058543e01b3979d8b", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0258" + ], + [ + "gene_synonym", + "EcoGene:EG40009" + ], + [ + "gene_synonym", + "GeneID:14678508" + ], + [ + "gene_synonym", + "b4708" + ], + [ + "gene_synonym", + "insI1" + ] + ], + "dna_sequence": "GAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", + "dna_sequence_length": 174, + "id": "CDS_259", + "location": [ + [ + "NC_000913", + 279931, + "+", + 174 + ] + ], + "md5": "5a113b11391db364fe59dd48647c9e71", + "parent_gene": "", + "protein_md5": "39959f4597757652cfc67adedc60f792", + "protein_translation": "ENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285026" + ], + [ + "gene_synonym", + "ECK4473" + ], + [ + "gene_synonym", + "EcoGene:EG14418" + ], + [ + "gene_synonym", + "GeneID:1450237" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q79E92" + ], + [ + "gene_synonym", + "b4505" + ], + [ + "gene_synonym", + "insX" + ], + [ + "gene_synonym", + "ykgN" + ] + ], + "dna_sequence": "ATGAGCGGTAAGCGTTATCCCGAAGAGTTTAAAACTGAAGCAGTCAAACAGGTTGTTGATCTCGGTTATTCTGTTGCCAGCGTTGCAACACGTCTCGATATCACCACCCACAGCCTTTATGCCTGGATAAAGAAGTACGGTCCGGATTCTTCCACTAATAAAGAACAGTCAGATGCTCAGGCCGAGATCCGCCGTCTCCAGAAAGAGCTGAAACGGGTTACCGACGAACGGGACATATTAAAAAAAGCT", + "dna_sequence_length": 249, + "id": "CDS_260", + "location": [ + [ + "NC_000913", + 280362, + "-", + 249 + ] + ], + "md5": "4b174c88f160f2de2fc4bbbdc9598199", + "parent_gene": "", + "protein_md5": "c52520b0950e83f4df70e71cdff7d50a", + "protein_translation": "MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKA", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000912" + ], + [ + "gene_synonym", + "ECK0267" + ], + [ + "gene_synonym", + "EcoGene:EG12339" + ], + [ + "gene_synonym", + "GeneID:944944" + ], + [ + "gene_synonym", + "JW0259" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37008" + ], + [ + "gene_synonym", + "b0266" + ], + [ + "gene_synonym", + "yagB" + ] + ], + "dna_sequence": "ATGAATAAAGACTCTACTCAAACTTGGGGGCTTAAACGAGATATCACACCGTGTTTCGGAGCACGACTGGTGCAGGAAGGTCATCGTCTGCATTTTCTGGCTGACCGGGCTGGATTCACCGGCTCATTCAGTGAGGTGCAGACTCTACAACTGGATGAAGCCTTCCCGCATTTTGTCGCACATCTGGAGCTGATGCTGCTCTCCTGTGAGCTGAATCCCAGGTACGCGCACTGTGTCACACTGTACCGTAACGGGCTGACTGGTGAAGCCGATACGCTGGGCAGTCATGGGTATGTATATATCGCAATT", + "dna_sequence_length": 309, + "id": "CDS_261", + "location": [ + [ + "NC_000913", + 280735, + "-", + 309 + ] + ], + "md5": "c1ff00fcea0fb26fc838caefcfec5356", + "parent_gene": "", + "protein_md5": "a76d7eea67e964759f2f1f440897fb8a", + "protein_translation": "MNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLADRAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVTLYRNGLTGEADTLGSHGYVYIAI", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000915" + ], + [ + "gene_synonym", + "ECK0268" + ], + [ + "gene_synonym", + "EcoGene:EG12338" + ], + [ + "gene_synonym", + "GI:16128252" + ], + [ + "gene_synonym", + "GeneID:944937" + ], + [ + "gene_synonym", + "JW0260" + ], + [ + "gene_synonym", + "NP_414801.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37007" + ], + [ + "gene_synonym", + "b0267" + ], + [ + "gene_synonym", + "yagA" + ] + ], + "dna_sequence": "ATGGAGTCGCTTATGCCCTGGGATGCGAGAGATACCATGTCATTACGTACTGAGTTTGTTTTGTTCGCCTCGCAGGACGGGGCGAACATCCGTTCCCTCTGCCGTCGCTTCGGCATTTCACCTGCCACCGGCTACAAGTGGCTCCAGCGCTGGGCTCAGGAAGGTGCCGCCGGTCTTCAGGACCGCCCGCGCATTCCGCACCATTCCCCGAACCGCTCATCTGACGACATCACGGCCCTGCTGCGTATGGCCCATGACCGTCATGAACGCTGGGGAGCCCGCAAGATTAAGCGCTGGCTCGAGGACCAGGGGCACACCATGCCCGCCTTCAGCACCGTCCATAACCTGATGGCCCGCCATGGCCTGCTGCCGGGCGCTTCACCGGGCATTCCCGCCACGGGCCGGTTCGAACACGACGCGCCGAACCGCCTCTGGCAGATGGATTTTAAGGGCCACTTTCCTTTTGGCGGTGGACGCTGCCATCCGCTCACCCTGCTGGACGACCACTCCCGTTTTTCCCTGTGCCTGGCGCACTGTACCGATGAACGGCGCGAGACCGTGCAGCAGCAGCTGGTCAGCGTGTTTGAGCGTTACGGCCTGCCGGACCGGATGACCATGGATAACGGCTCACCGTGGGGCGACACCACCGGCACCTGGACGGCGCTGGAGCTGTGGCTGATGCGCCTGGGTATCCGGGTGGGGCACTCCCGGCCTTATCATCCGCAGACGCAGGGGAAGCTGGAGCGTTTTCACCGCAGCCTGAAGGCGGAAGTGCTGCAGGGAAAATGGTTCGCAGACAGCGGTGAACTGCAGCGCGCCTTCGACCACTGGCGGACGGTCTATAACCTTGAACGCCCGCACGAGGCGCTGGATATGGCGGTACCGGGCTCGCGGTATCAGCCGTCAGCGCGGCAGTACAGCGGCAACACAACGCCCCCGGAATACGATGAAGGGGTGATGGTCAGGAAAGTGGATATCAGCGGAAAGCTGAGCGTGAAAGGGGTAAGTCTGAGCGCAGGCAAGGCGTTCAGGGGAGAACGGGTCGGGCTGAAGGAGATGCAGGAAGACGGCAGCTACGAGGTGTGGTGGTACAGCACGAAAGTGGGGGTGATCGACCTGAAGAAAAAGTCGATCACCATGGGTAAAGGATGTTAA", + "dna_sequence_length": 1155, + "functions": [ + "CP4-6 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_262", + "location": [ + [ + "NC_000913", + 281983, + "-", + 1155 + ] + ], + "md5": "64e0e06ae1438a7c6031ce7d282b0c85", + "parent_gene": "", + "protein_md5": "b4d61c8451a847737f2083173925d977", + "protein_translation": "MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000921" + ], + [ + "gene_synonym", + "ECK0269" + ], + [ + "gene_synonym", + "EcoGene:EG13344" + ], + [ + "gene_synonym", + "GI:345452715" + ], + [ + "gene_synonym", + "GeneID:944925" + ], + [ + "gene_synonym", + "JW0261" + ], + [ + "gene_synonym", + "NP_414802.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75682" + ], + [ + "gene_synonym", + "b0268" + ], + [ + "gene_synonym", + "yagE" + ] + ], + "dna_sequence": "ATGCCGCAGTCCGCGTTGTTCACGGGAATCATTCCCCCTGTCTCCACCATTTTTACCGCCGACGGCCAGCTCGATAAGCCGGGCACCGCCGCGCTGATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAGCGAACCTGATCCGCTATTTCGAGCAGGTGGCCGACAGCGTCACGCTGCCGGTGATGCTCTATAACTTCCCGGCGCTGACCGGGCAGGATCTGACTCCGGCGCTGGTGAAAACCCTCGCCGACTCGCGCAGCAATATTATCGGCATCAAAGACACCATCGACTCCGTCGCCCACCTGCGCAGCATGATCCATACCGTCAAAGGTGCCCATCCGCACTTCACCGTGCTCTGCGGCTACGACGATCATCTGTTCAATACCCTGCTGCTCGGCGGCGACGGGGCGATATCGGCGAGCGGCAACTTTGCCCCGCAGGTGTCGGTGAATCTTCTGAAAGCCTGGCGCGACGGGGACGTGGCGAAAGCGGCCGGGTATCATCAGACCTTGCTGCAAATTCCGCAGATGTATCAGCTGGATACGCCGTTTGTGAACGTGATTAAAGAGGCGATCGTGCTCTGCGGTCGTCCTGTCTCCACGCACGTGCTGCCGCCCGCCTCGCCGCTGGACGAGCCGCGCAAGGCGCAGCTGAAAACCCTGCTGCAACAGCTCAAGCTTTGCTGA", + "dna_sequence_length": 909, + "functions": [ + "2-keto-3-deoxy gluconate (KDG) aldolase", + "CP4-6 prophage" + ], + "id": "CDS_263", + "location": [ + [ + "NC_000913", + 282278, + "+", + 909 + ] + ], + "md5": "22b1f2814cf9993af0cb192a63c980f0", + "parent_gene": "", + "protein_md5": "4d146da1ce0f66d28ce9ad1e71d74b1f", + "protein_translation": "MPQSALFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKLC", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000923" + ], + [ + "gene_synonym", + "ECK0270" + ], + [ + "gene_synonym", + "EcoGene:EG13345" + ], + [ + "gene_synonym", + "GI:16128254" + ], + [ + "gene_synonym", + "GeneID:944928" + ], + [ + "gene_synonym", + "JW0262" + ], + [ + "gene_synonym", + "NP_414803.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77596" + ], + [ + "gene_synonym", + "b0269" + ], + [ + "gene_synonym", + "yagF" + ] + ], + "dna_sequence": "ATGACCATTGAGAAAATTTTCACCCCGCAGGACGACGCGTTTTATGCGGTGATCACCCACGCGGCGGGGCCGCAGGGCGCTCTGCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGGCATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACCATGATTGCGCTGGCCGCGATGCACGACCTGCCGACTATTCTGGTGCCGGGCGGGGCGACGCTGCCGCCGACCGTCGGGGAAGACGCGGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGATCGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACGATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGAGCGTGCTGCCCAACGGCCCGGACTATCACCCGACCGTGCGCGCCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCGGAAGAGGGCGCGCGCGAGCTGGCGCGGCGGCAGACGCACCCGGACCTGCACGCCCACGACTTTTTGCCGGACGACACCCGGCTGTGGGCGGCACTGCAGTCGGTGAGCGGCGGCACCTGGAAAGGCTGTATTTATGACACCGATAAAATTATCGAGGTAATTAACGCCGGTAAAAAAGCGCTCGGAATTTAA", + "dna_sequence_length": 1968, + "functions": [ + "CP4-6 prophage", + "dehydratase family protein" + ], + "id": "CDS_264", + "location": [ + [ + "NC_000913", + 283201, + "+", + 1968 + ] + ], + "md5": "dd03d846fcd59c6c4163626360705a38", + "parent_gene": "", + "protein_md5": "cc43aab40ad953046e929249fcb677d2", + "protein_translation": "MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLFGMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKEITRNGGIPFAAFVSDPCDGRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVATCDKGLPATMIALAAMHDLPTILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEAAELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIARQSARAVSELDSRGITTRDILSDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWTRINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGENLEWWQASERRARFRQCLREQDGVEPDDVILPPEKAKAKGLTSTVCFPTGNIAPEGSVIKATAIDPSVVGEDGVYHHTGRVRVFVSEAQAIKAIKREEIVQGDIMVVIGGGPSGTGMEETYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDIIEIAVDRLTLTGSVNFIGTADNPLTPEEGARELARRQTHPDLHAHDFLPDDTRLWAALQSVSGGTWKGCIYDTDKIIEVINAGKKALGI", + "protein_translation_length": 655, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000929" + ], + [ + "gene_synonym", + "ECK0271" + ], + [ + "gene_synonym", + "EcoGene:EG13346" + ], + [ + "gene_synonym", + "GI:16128255" + ], + [ + "gene_synonym", + "GeneID:944947" + ], + [ + "gene_synonym", + "JW0263" + ], + [ + "gene_synonym", + "NP_414804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75683" + ], + [ + "gene_synonym", + "b0270" + ], + [ + "gene_synonym", + "yagG" + ] + ], + "dna_sequence": "ATGACGCAATTAACCATGAAAGACAAAATTGGCTACGGGCTGGGAGACACCGCCTGCGGCTTCGTCTGGCAGGCCACGATGTTCCTGCTGGCCTATTTCTACACCGACGTCTTCGGCCTGTCGGCGGGGATTATGGGCACGCTGTTTTTGGTCTCCCGCGTGCTCGACGCCGTCACCGACCCGCTGATGGGGCTGCTGGTAGACCGCACCCGCACGCGGCACGGCCAGTTCCGCCCGTTCCTGCTGTGGGGGGCCATCCCGTTCGGCATCGTCTGCGTGCTGACCTTCTACACGCCGGACTTCTCCGCACAGGGCAAGATCATCTACGCCTGCGTGACCTACATTCTCCTGACCCTGGTCTACACCTTCGTTAACGTGCCGTACTGCGCCATGCCGGGCGTCATCACCGCCGACCCGAAAGAGCGTCACGCCCTGCAGTCCTGGCGCTTCTTCCTGGCGGCGGCGGGCTCGCTCGCTATCAGCGGCATCGCGCTGCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCTCTACGTCTGCTTCTTCACGACCAAAGAGCGCTACACCTTTGAGGTGCAGCCGGGCTCGTCGGTGGCGAAAGACCTTAAGCTGCTGCTGGGCAACAGCCAGTGGCGCATCATGTGCGCGTTCAAGATGATGGCGACCTGCTCCAACGTGGTGCGCGGCGGGGCGACGCTCTACTTCGTGAAATACGTGATGGATCACCCGGAGTTGGCGACCCAGTTTTTACTTTACGGCAGCCTCGCCACCATGTTCGGCTCGCTTTGCTCCTCACGCCTGCTGGGCCGCTTCGACCGCGTCACCGCCTTCAAGTGGATCATCGTCGCCTACTCGCTGATCAGCCTGCTGATTTTCGTCACCCCGGCGGAGCACATCGCGCTCATTTTTGCCCTCAACATCCTGTTCCTGTTCGTCTTTAATACCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGGCGCAGGGCGAGGCCGTTCCCGACGCCGCGACAGCCGCATCCCATTAA", + "dna_sequence_length": 1383, + "functions": [ + "CP4-6 prophage", + "putative sugar transporter" + ], + "id": "CDS_265", + "location": [ + [ + "NC_000913", + 285395, + "+", + 1383 + ] + ], + "md5": "f95a18693eb84084856811d738877250", + "parent_gene": "", + "protein_md5": "734734bacea304a02153e52c3e38f2a2", + "protein_translation": "MTQLTMKDKIGYGLGDTACGFVWQATMFLLAYFYTDVFGLSAGIMGTLFLVSRVLDAVTDPLMGLLVDRTRTRHGQFRPFLLWGAIPFGIVCVLTFYTPDFSAQGKIIYACVTYILLTLVYTFVNVPYCAMPGVITADPKERHALQSWRFFLAAAGSLAISGIALPLVSIIGKGDEQVGYFGAMCVLGLSGVVLLYVCFFTTKERYTFEVQPGSSVAKDLKLLLGNSQWRIMCAFKMMATCSNVVRGGATLYFVKYVMDHPELATQFLLYGSLATMFGSLCSSRLLGRFDRVTAFKWIIVAYSLISLLIFVTPAEHIALIFALNILFLFVFNTTTPLQWLMASDVVDYEESRSGRRLDGLVFSTYLFSLKIGLAIGGAVVGWILAYVNYSASSSVQPVEVLTTIKILFCVVPVVLYAGMFIMLSLYKLTDARVEAISRQLIKHRAAQGEAVPDAATAASH", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000931" + ], + [ + "gene_synonym", + "ECK0272" + ], + [ + "gene_synonym", + "EcoGene:EG13347" + ], + [ + "gene_synonym", + "GI:16128256" + ], + [ + "gene_synonym", + "GeneID:944949" + ], + [ + "gene_synonym", + "JW0264" + ], + [ + "gene_synonym", + "NP_414805.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77713" + ], + [ + "gene_synonym", + "b0271" + ], + [ + "gene_synonym", + "yagH" + ] + ], + "dna_sequence": "ATGGAAATCACTAACCCGATACTCACCGGCTTCAACCCGGACCCGTCCCTGTGCCGCCAGGGCGAGGACTACTACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCTGCTCTACACCGACGTGAAGATTGTCGACTCGCCGTGGAAAAACGGCCGCAACTTCCTCGTCACCGCGCCCTCCATCGAGGGGCCATGGAGCGAGCCAATCCCGATGGGCAACGGCGGGTTTGACCCGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCGTTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACGCCGCTCTGCTACACCGAAGGCGCGCACCTGTATCGCCACGCGGGATGGTACTACCTGATGGCCGCCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATGGCCTACCTCACCAGCCGCCCGCTGCGCCTGCCCGGCGTGCCGCTGCTGGCCTCCGGCGGACGCGGCTACTGCCCGCTGGGGCGCGAGACCGGCATCGCCCGCATTGAATGGCGCGACGGCTGGCCGTACGTGGAAGGCGGCAAGCACGCGCAGCTGACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTACGAGGAGGGACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAA", + "dna_sequence_length": 1611, + "functions": [ + "CP4-6 prophage", + "putative xylosidase/arabinosidase" + ], + "id": "CDS_266", + "location": [ + [ + "NC_000913", + 286789, + "+", + 1611 + ] + ], + "md5": "870c28b57cf4c834ab186c6e93e899b0", + "parent_gene": "", + "protein_md5": "481f72f8536242029e9c5cab2d79ffc8", + "protein_translation": "MEITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYADGKFWLLYTDVKIVDSPWKNGRNFLVTAPSIEGPWSEPIPMGNGGFDPSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAGWYYLMAAEGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPLLASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDDFDASSLDPELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFRAETRMEFSPVHFQQSAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQLDHNVPSWPLHEQPIPVPEHAESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFTYEPV", + "protein_translation_length": 536, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000933" + ], + [ + "gene_synonym", + "ECK0273" + ], + [ + "gene_synonym", + "EcoGene:EG13349" + ], + [ + "gene_synonym", + "GI:16128257" + ], + [ + "gene_synonym", + "GeneID:945016" + ], + [ + "gene_synonym", + "JW0265" + ], + [ + "gene_synonym", + "NP_414806.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77300" + ], + [ + "gene_synonym", + "b0272" + ], + [ + "gene_synonym", + "yagI" + ] + ], + "dna_sequence": "ATGCCGATTATTCAGTCTGTTGAACGTGCGTTGCAGATCCTCGACCTGTTCAACGAGCAGGCCACCGAGCTTAAGATCACCGACATCAGCAAACTGATGGGGCTGAGCAAGAGTACCCTCCACTCGCTGCTAAAAACCCTGCAGCTTCACGGCTATATCGATCAGAACCCGGAGAACGGCAAGTATCGCCTCGGCATGAAGCTGGTCGAGCGCGGCCATTTTGTCGTGGGCTCCATCGATATTCGGCAGAAGGCAAAAGGCTGGCTGACGGAGCTGTCCCGGCGGACCGGGCAGACCACCCATCTGGGGATCCTGGACGGGCGTGAAGGGGTCTATATCGAGAAGATTGAAGGCAAGCTGGCCGCCATCGCCTATTCACGCATCGGCCGCCGCCTGCCGGTGCACGCCACCGCCATCGGCAAGGTGTTGATTGCCTGGCTGGGCGAGGCCGAGCTGAACGCCCTGCTGGAGGGCTATCAGTACACTACCTTTACGCCCGCCACCCTCGCGTCTCGCGAAGCCTTAATGAGCGCCCTGGCGCAGACCCGCGAGCAAGGCTACGCCCTGGACAGCGAAGAGAACGAGCAGGGCGTGCGCTGCGTGGCGGTGCCGGTGTGGAACCACGAGTCCCGCGTCATCGCCGCCCTGAGCCTGTCGACGCTGACCTCCCGCGTGGACGACGCGGAGCTGGCTAATTTCCGCGAGCAGCTTCAGCAGGCCGGGCTCGCGCTCTCGCGCGCGCTGGGCTACCCGGCCTGA", + "dna_sequence_length": 759, + "functions": [ + "CP4-6 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_267", + "location": [ + [ + "NC_000913", + 289162, + "-", + 759 + ] + ], + "md5": "c1da6a7bdffbc7cef17e117bab483152", + "parent_gene": "", + "protein_md5": "4f66db19180d454d04bf08c00c68855d", + "protein_translation": "MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTTHLGILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQYTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQAGLALSRALGYPA", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000939" + ], + [ + "gene_synonym", + "Arg5" + ], + [ + "gene_synonym", + "ECK0274" + ], + [ + "gene_synonym", + "EcoGene:EG10067" + ], + [ + "gene_synonym", + "GI:16128258" + ], + [ + "gene_synonym", + "GeneID:944844" + ], + [ + "gene_synonym", + "JW0266" + ], + [ + "gene_synonym", + "NP_414807.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06960" + ], + [ + "gene_synonym", + "argD" + ], + [ + "gene_synonym", + "argF" + ], + [ + "gene_synonym", + "b0273" + ] + ], + "dna_sequence": "ATGTCCGATTTATACAAAAAACACTTTCTGAAACTGCTCGACTTTACCCCTGCACAGTTCACTTCTCTGCTGACCCTTGCCGCACAGCTCAAAGCCGATAAAAAAAATGGCAAGGAAGTACAGAAGCTTACCGGTAAAAACATCGCGCTCATCTTCGAAAAAGACTCGACTCGTACCCGTTGCTCTTTCGAAGTTGCCGCATTTGACCAGGGCGCGCGCGTTACCTATTTAGGGCCGAGCGGCAGCCAGATTGGGCATAAAGAGTCAATTAAGGACACCGCGCGGGTTCTCGGGCGGATGTATGACGGCATTCAGTATCGCGGTCACGGCCAGGAAGTGGTCGAAACGCTGGCGCAGTATGCGGGCGTGCCGGTGTGGAACGGGCTGACCAACGAGTTCCACCCGACCCAGCTGCTGGCGGACCTGATGACCATGCAGGAGCACCTGCCGGGCAAGGCGTTTAACGAGATGACGCTGGTCTACGCGGGCGATGCGCGCAACAACATGGGCAACTCGATGCTGGAAGCGGCGGCGCTGACCGGGCTGGATCTGCGCCTGTTGGCCCCGAAAGCCTGCTGGCCGGAAGAGAGCCTGGTGGCGGAGTGCAGCGCGCTGGCGGAGAAGCACGGCGGGAAAATTACTCTGACGGAAGACGTGGCGGCAGGCGTTAAGGGCGCGGACTTTATCTATACCGACGTGTGGGTGTCGATGGGCGAGGCCAAAGAGAAGTGGGCAGAGCGGATTGCGCTGCTGCGCGGGTATCAGGTGAACGCGCAGATGATGGCGCTGACCGACAACCCGAACGTGAAGTTCCTGCACTGTCTGCCGGCGTTCCATGACGACCAGACTACGCTCGGCAAGCAGATGGCGAAGGAGTTCGATCTGCACGGCGGGATGGAGGTGACGGACGAGGTGTTTGAGTCGGCGGCGAGCATCGTGTTCGACCAGGCGGAAAACCGGATGCATACGATTAAGGCGGTGATGATGGCAACGCTTGGGGAGTGA", + "dna_sequence_length": 1005, + "functions": [ + "ornithine carbamoyltransferase 2, chain F", + "CP4-6 prophage" + ], + "id": "CDS_268", + "location": [ + [ + "NC_000913", + 290305, + "-", + 1005 + ] + ], + "md5": "47d66ec1bf2fc5ae2b5902dfac2b1695", + "parent_gene": "", + "protein_md5": "54625b44f67ed33ff02e0b4be34a5262", + "protein_translation": "MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLTGKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQYAGVPVWNGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEAKEKWAERIALLRGYQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMMATLGE", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4504" + ], + [ + "gene_synonym", + "EcoGene:EG14492" + ], + [ + "gene_synonym", + "GeneID:7751632" + ], + [ + "gene_synonym", + "b4688" + ], + [ + "gene_synonym", + "ykgS" + ] + ], + "dna_sequence": "GAAAATAATCGTATCTGCCTCCGATTCTCTGCAGAAGCAGAAAGACATTGGATCGAATTCTACAACCAGGTCGAGTCAGAAATGAGAATGATTGGCCTTCTTTATGATTTTAAGGATTATGCTTCTAAAATGGCGGAGAACATGGCGAGGCTTGCTGCCTTACTTCATTACTTCAGCGGTGATGGAGGCGATATATCTGTTACCG", + "dna_sequence_length": 205, + "id": "CDS_269", + "location": [ + [ + "NC_000913", + 290429, + "+", + 205 + ] + ], + "md5": "6e21e0e4100636e8fd1e32ea6651644c", + "parent_gene": "", + "protein_md5": "3c7aa5886e1a29752fe16d7d41aefe3c", + "protein_translation": "ENNRICLRFSAEAERHWIEFYNQVESEMRMIGLLYDFKDYASKMAENMARLAALLHYFSGDGGDISVT", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000948" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16128259" + ], + [ + "gene_synonym", + "GeneID:944950" + ], + [ + "gene_synonym", + "NP_414808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF27" + ], + [ + "gene_synonym", + "b0274" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCAGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_270", + "location": [ + [ + "NC_000913", + 291152, + "-", + 504 + ] + ], + "md5": "b3b6d14e187a3d92aafdf329f45ef694", + "parent_gene": "", + "protein_md5": "7d37bc43f614740314039784eef22b64", + "protein_translation": "MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000951" + ], + [ + "gene_synonym", + "ECK4523" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16128260" + ], + [ + "gene_synonym", + "GeneID:944951" + ], + [ + "gene_synonym", + "NP_414809.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF09" + ], + [ + "gene_synonym", + "b0275" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_271", + "location": [ + [ + "NC_000913", + 291346, + "-", + 276 + ] + ], + "md5": "41231158e2773380f006f003f3c4ba9f", + "parent_gene": "", + "protein_md5": "27f7da6e06bb874058543e01b3979d8b", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000963" + ], + [ + "gene_synonym", + "ECK0275" + ], + [ + "gene_synonym", + "EcoGene:EG13549" + ], + [ + "gene_synonym", + "GeneID:949094" + ], + [ + "gene_synonym", + "JW0270" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77169" + ], + [ + "gene_synonym", + "b0276" + ], + [ + "gene_synonym", + "yagJ" + ] + ], + "dna_sequence": "ATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTATCGTCAAATCGTCGAAATGAGTACCGAACCGCAGGATGTGGATCTGGTCAGGCCGGCGAACAAGTTTGAAATGACCAGGGTGCGTGAAGGTGAAAAGGAAGCTGACCTTCCAGTCTGGAAACACCATTTGTTGTGTGACGAAAGCGGGAACTATCCGGCTCTGTTGAACCATTGGGAAACCAAGGTTTTTGAGATCGAAACCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTAAAGGGTAAATTACGAGTGTTAGATTTGAAACGGCAGGATGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAA", + "dna_sequence_length": 828, + "id": "CDS_272", + "location": [ + [ + "NC_000913", + 291404, + "+", + 828 + ] + ], + "md5": "b69977febd471ca806657ca0fb6ed54a", + "parent_gene": "", + "protein_md5": "b3e53b7f121b8068a3b1ba2946795f66", + "protein_translation": "IFSPDVSRTYVEYLADKVADREEDAEEYLEAIMEARVTVAGMGLVMEVQDYFDGEADRLAKAWLAEYTPQIKSLKDERKEAYRQIVEMSTEPQDVDLVRPANKFEMTRVREGEKEADLPVWKHHLLCDESGNYPALLNHWETKVFEIETKREGFAFWYRNPQYTGQSSLGIAYVEAEQYKIVRPDFLFFAEQDGKMVVDLVDPHSLHLADALPKLEGLALYAEHHSDAYRRIESVAEVKGKLRVLDLKRQDVQDAVATAENAETLFSSGLADDYQ", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000965" + ], + [ + "gene_synonym", + "ECK0276" + ], + [ + "gene_synonym", + "EcoGene:EG13550" + ], + [ + "gene_synonym", + "GI:16128262" + ], + [ + "gene_synonym", + "GeneID:945847" + ], + [ + "gene_synonym", + "JW0271" + ], + [ + "gene_synonym", + "NP_414811.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77657" + ], + [ + "gene_synonym", + "b0277" + ], + [ + "gene_synonym", + "yagK" + ] + ], + "dna_sequence": "ATGAAAACATATCAAGGTACTCATGGAGTACATATCCTCGAATATCAGAGTAAGATTAATAAATTATTATGTTATTTGACTAACCGGTATCCTAGGTTAATTGCTGTACGTGTCGATCTCCACTATCCCAAAATAGTTGATAACGGTGACAATATCTGTTGCTTCCCTAACCTGGAACCTGGGGTGATATCCCGGATGCGTGAATCCCTCAGAGCTAAGCTGGAGGCTGACCGTACCCGTAAGGTGCGTGAGGATAAACGCATTTACCGTTGCCCTTTATTTATTATATGGGCGAAAGAGTATTCTGAATCAGGTAAATGCCACTATCACATTTGCCTGTTGTTCAACAAAGACGCTTACTACCACCTCGGGGATTACGATCAGGACGATAACCTTAGAGGGATGATCACAGGAGCCTGGTACAGCGCCCTGAGACTGGAGAGAGACGATCACCCTGGTCTGGTCCATTTTCCTGAAAACTGTAAGTATGTGCTAGACACCAATAGTACTGACTTCCAGCAGAACTACCAGGCGCTGTTAACCCGACTGGACTACCTGACCAAAGTTGAAAGCAAAGTGTTTGGTGAAGGAGACCGTAACTTCGGCTGTAGCCAAATCGAACTGTAA", + "dna_sequence_length": 627, + "functions": [ + "CP4-6 prophage", + "conserved protein" + ], + "id": "CDS_273", + "location": [ + [ + "NC_000913", + 292948, + "-", + 627 + ] + ], + "md5": "f8190389c9ef536f90dd67f5e2d41cc5", + "parent_gene": "", + "protein_md5": "bc044919ecf19ff1fc1d4d905e7dcb9d", + "protein_translation": "MKTYQGTHGVHILEYQSKINKLLCYLTNRYPRLIAVRVDLHYPKIVDNGDNICCFPNLEPGVISRMRESLRAKLEADRTRKVREDKRIYRCPLFIIWAKEYSESGKCHYHICLLFNKDAYYHLGDYDQDDNLRGMITGAWYSALRLERDDHPGLVHFPENCKYVLDTNSTDFQQNYQALLTRLDYLTKVESKVFGEGDRNFGCSQIEL", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000970" + ], + [ + "gene_synonym", + "ECK0277" + ], + [ + "gene_synonym", + "EcoGene:EG13551" + ], + [ + "gene_synonym", + "GI:16128263" + ], + [ + "gene_synonym", + "GeneID:945845" + ], + [ + "gene_synonym", + "JW0272" + ], + [ + "gene_synonym", + "NP_414812.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77607" + ], + [ + "gene_synonym", + "b0278" + ], + [ + "gene_synonym", + "yagL" + ] + ], + "dna_sequence": "ATGAGAGGTAAAATACTACTTTACCAGTTAAAGTATCGCTGGCAATCACTCTCTATTTTTGGTTGTTTTTTATGCAAAATGACATTATTCAGGTATCAAAAAATAATTTATGACACCGGAGTGCATCAGATGCGTTCATTTTTTTACACCATATGCAGTAGCGAACAGCAAGAAAGCATTACAGATCATCACTCACTTGCTGAGATATGCCAAAAATTTAATATTCTACCTGAACATGTTGTGATCGAGCAGGTAGATATTAAAGAGGTTGTTTCAGAGCAACGTTTACTCAGACAATTGATTCATCATGAAATGAACCGGCAGGACACGCTTGTCATTCCAGATCTAAGCTGTCTTGGCAGAACTGTGGAGGACTTACAGAATATTTTATTTTTTTGCCTTCAAAAAGAAATGTTTATCTACAGCTACCATCCAGCTTCAAGGATAGAGCCTTCTGCTGAAAGTTGCTTGTCTTTTTTGATTGCTCGTCAGGATACGATTGACATTCACAATCTGAAATCAACTAAAAGCCGATATCGACATGTTAAGAAAAAATTAGGACGAAAGGAGGGAAGCAAATACCGACGTGATATCACAATACTTAAGAAAGGTGGATTTACTCAGGCTGAGATTGCAAAGAAATTGAGTATCAGTTTATCGACTGTGAAGCGGCACTGGAATAACGGAATCATCGGTTAA", + "dna_sequence_length": 699, + "functions": [ + "CP4-6 prophage", + "DNA-binding protein" + ], + "id": "CDS_274", + "location": [ + [ + "NC_000913", + 293918, + "-", + 699 + ] + ], + "md5": "3af6fed31e59d363e057a69928fd884c", + "parent_gene": "", + "protein_md5": "857177c38afbdc48f0283d29f46a6336", + "protein_translation": "MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000972" + ], + [ + "gene_synonym", + "ECK0278" + ], + [ + "gene_synonym", + "EcoGene:EG13552" + ], + [ + "gene_synonym", + "GI:16128264" + ], + [ + "gene_synonym", + "GeneID:944959" + ], + [ + "gene_synonym", + "JW0273" + ], + [ + "gene_synonym", + "NP_414813.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71296" + ], + [ + "gene_synonym", + "b0279" + ], + [ + "gene_synonym", + "yagM" + ] + ], + "dna_sequence": "ATGTCTAATAGTGTTACTAATTTTGAGATGAGCAGCGTTCTACCAGGAAAAAAACCTTGTCAAGGCAAAAACAATGAGTCACAGGTAGTACAGACTACTCCCATAAAAAAACACTCAGTCACGTTCAAAAATCAATCTTCATTAGGAGTAATTGATCATTATGCCAGACTAACAAATAAATCTCACTCTTCCGTAATAGCGGAAGTTGTGGATTTGGCTATCCCTATATTAGAAAAATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTAAAACAGAAGTAACTCTGGAAGAGTACTGTTCGTTAATCTGGAAAACGAACATCATGAGTCCATTAAAAATCCCCATTGCAGATTACTTTCAACTGAACGCTAATGATGAATTCATGGGGAAAGATGAAAAAACAGTTATACGTGAAAGGCTATCCTCGCTAAGGGAAAATTACGATATGGAAAAAGCCATTTACATTTACAATCAAAGACATTTTGATGTAAAGCATCAAAGTGTCTCAGGATATTCAAACATTATTCTTATTCATAGAACAACCTTTGAGGGTTATTACTTTGATGCCGGGCAGGCTCTACTCTTGTCAACATCCCAATTGATTATATTCGGGATAAATGAAGTTCTTAGAAGAAAGGGGATTGTTATGCCTTATCCGGTTGTTTGTTGGATTGATATTTACCATGTCAATGAAATGGTGGTTATGCTGCCAGTGCTCCGCAAAACAGATGTTTCCAACCGTGTTAATGTACCGGATGACATCATTATAAACCCATACTCACAAGAGAGCAGAACCTAA", + "dna_sequence_length": 855, + "functions": [ + "CP4-6 prophage", + "uncharacterized protein" + ], + "id": "CDS_275", + "location": [ + [ + "NC_000913", + 294799, + "-", + 855 + ] + ], + "md5": "a263cad84eb864bdf5ad599c2134ba44", + "parent_gene": "", + "protein_md5": "0e2ae6a78bfe082a381dc4681bbb317f", + "protein_translation": "MSNSVTNFEMSSVLPGKKPCQGKNNESQVVQTTPIKKHSVTFKNQSSLGVIDHYARLTNKSHSSVIAEVVDLAIPILEKCNRHNWSINEIKNDLLKFSIKESINRSRGKTEVTLEEYCSLIWKTNIMSPLKIPIADYFQLNANDEFMGKDEKTVIRERLSSLRENYDMEKAIYIYNQRHFDVKHQSVSGYSNIILIHRTTFEGYYFDAGQALLLSTSQLIIFGINEVLRRKGIVMPYPVVCWIDIYHVNEMVVMLPVLRKTDVSNRVNVPDDIIINPYSQESRT", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000976" + ], + [ + "gene_synonym", + "ECK0279" + ], + [ + "gene_synonym", + "EcoGene:EG13553" + ], + [ + "gene_synonym", + "GI:16128265" + ], + [ + "gene_synonym", + "GeneID:945349" + ], + [ + "gene_synonym", + "JW0274" + ], + [ + "gene_synonym", + "NP_414814.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71297" + ], + [ + "gene_synonym", + "b0280" + ], + [ + "gene_synonym", + "yagN" + ] + ], + "dna_sequence": "ATGGCAACCCCAGCAACTGTATCCATAGAACCCACTCTGGCAGCTATCAGAGCTCGCTGGTGTATTAATTCAAGTAAAACAACTCAATCCTTTAACGATCCTGCGTCCATGGAAGAGGTTGTCGAGTATCTCAAAGGAACATACTCAGCTCTTCGCAAGTCTGTCGCATGCGCCAAACTGAAAATTTTACATCTTAAACAAAGAATGCAAAATGCTACTAACTTTCTCGCGCGTCTGATGTCATGTAAAAATCAGGCATCCAGATCGCATCACAGTACGGCTAAATCAGCTAAAAGTGCCTTATCATCAGATTCAGGTGATGGTAGTGACCCCGACCCCGAGCCCGAAACGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGA", + "dna_sequence_length": 441, + "functions": [ + "CP4-6 prophage", + "uncharacterized protein" + ], + "id": "CDS_276", + "location": [ + [ + "NC_000913", + 295579, + "-", + 441 + ] + ], + "md5": "9e21439c2de6e3aa97930b1d11fc2ebb", + "parent_gene": "", + "protein_md5": "a8beb55dcc0d150c8874fa37d910afad", + "protein_translation": "MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYLKGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALSSDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000979" + ], + [ + "gene_synonym", + "ECK0280" + ], + [ + "gene_synonym", + "EcoGene:EG13554" + ], + [ + "gene_synonym", + "GI:16128266" + ], + [ + "gene_synonym", + "GeneID:947351" + ], + [ + "gene_synonym", + "JW0275" + ], + [ + "gene_synonym", + "NP_414815.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71298" + ], + [ + "gene_synonym", + "b0281" + ], + [ + "gene_synonym", + "intF" + ], + [ + "gene_synonym", + "yagO" + ] + ], + "dna_sequence": "ATGTTTATTCCCTCCATTTACTTACACCAGCAGTTACATTATTGTAAGACAGCAATTCTCAACTGGAGCCGAAAAATGGCGCTTTCAAGACAAAAATTTACCTTCGAAAGACTTCGCAGATTCACCTTACCGGAAGGGAAAAAACAAACTTTTCTTTGGGATGCAGATGTAACAACCCTGGCATGCCGAGCAACTAGCGGAGCAAAAGCCTTTGTATTCCAAAGCGTATATGCGGGGAAAACCCTTCGCATGACTATTGGCAACATTAACGACTGGAAGATTGATGATGCGAGAGCCGAGGCAAGACGGTTACAAACATTGATCGATACAGGGATAGATCCACGAATTGCTAAGGCTGTAAAAATCGCAGAAGCAGAATCCCTGCAGGCAGAATCACGTAAAACAAAAGTGACTTTCTCCGTCGCCTGGGAAGACTATCTTCAAGAATTGAGAACCGGTATCAGTGCAAAAACTAAACGCCCATATTCTACTCGATACATTGCCGATCACATTAACTTGTCCAGTCGTGGAGGCGAAAGTAAAAAAAGAGGCCAAGGCCCGACTTCGGCTGGACCATTGGCTAGTTTGCTCAACCTGCCGTTATCGGAGCTAACCCCAGATTACATAGCAGCGTGGCTGAGTACAGAAAGGCAAAATAGACCTACCGTCACTGCTCACGCTTATCGCCTACTACGTGCTTTCATCAAATGGAGTAATTATCAGAAAAAATATCAAGGGATCATTCCTGGCGATCTGGCACAAGATTACAACGTAAGAAAAATGGTTCCCGTGTCAGCGAGTAAAGCTGATGATTGCCTGCAAAAGGAACAACTAAAAAGCTGGTTTAGTGCCGTGCGTAGCCTCAATAATCCTATTGCATCGGCCTATCTCCAAGTACTTTTGCTCACTGGTGCTCGGCGTGAAGAAATTGCGTCGCTTCGCTGGTCAGACGTAGATTTCAAATGGTCAAGCATGCGAATTAAAGACAAGATCGAAGGTGAACGTATCATCCCTCTCACTCCTTATGTTTCTGAATTGTTAAATGTACTAGCGCAATCCCCAAATTCTGACGTAAATAAGGAGGGTTGGGTTTTCAGAAGTAACAGTAAAAGTGGCAAAATTATTGAGCCGCGTTCAGCGCACAACAGAGCATTAGTGCTGGCTGAGTTACCACATATCAGCCTTCACGGTTTACGTCGTAGTTTTGGTACTTTGGCCGAGTGGGTTGAAGTTCCCACTGGTATTGTTGCTCAAATTATGGGACACAAACCCAGCGCTCTTGCCGAAAAACACTATCGCCGTCGTCCGTTAGATCTGTTACGAAAATGGCACGAGAAAATTGAGACATGGATCTTAAATGAAGCAGGTATTACCATAAAAAACAACGTTGATATGCGTTGA", + "dna_sequence_length": 1401, + "functions": [ + "CP4-6 prophage", + "putative phage integrase" + ], + "id": "CDS_277", + "location": [ + [ + "NC_000913", + 297096, + "-", + 1401 + ] + ], + "md5": "108920a212fab69ebc684b7ca3408e28", + "parent_gene": "", + "protein_md5": "f4ae31da92a322db7baee553ca5a2a4e", + "protein_translation": "MFIPSIYLHQQLHYCKTAILNWSRKMALSRQKFTFERLRRFTLPEGKKQTFLWDADVTTLACRATSGAKAFVFQSVYAGKTLRMTIGNINDWKIDDARAEARRLQTLIDTGIDPRIAKAVKIAEAESLQAESRKTKVTFSVAWEDYLQELRTGISAKTKRPYSTRYIADHINLSSRGGESKKRGQGPTSAGPLASLLNLPLSELTPDYIAAWLSTERQNRPTVTAHAYRLLRAFIKWSNYQKKYQGIIPGDLAQDYNVRKMVPVSASKADDCLQKEQLKSWFSAVRSLNNPIASAYLQVLLLTGARREEIASLRWSDVDFKWSSMRIKDKIEGERIIPLTPYVSELLNVLAQSPNSDVNKEGWVFRSNSKSGKIIEPRSAHNRALVLAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWHEKIETWILNEAGITIKNNVDMR", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000982" + ], + [ + "gene_synonym", + "ECK0281" + ], + [ + "gene_synonym", + "EcoGene:EG13555" + ], + [ + "gene_synonym", + "GeneID:7751633" + ], + [ + "gene_synonym", + "JW0276" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75684" + ], + [ + "gene_synonym", + "b4694" + ], + [ + "gene_synonym", + "yagP" + ] + ], + "dna_sequence": "CATAAGTGTATCGGCTGGCGTCAGTCCCCGGAGGTTGCGCCTTATCGCTGGCCATTTGAAGAAAACGGGAGAACTTTCGACCTTGCGATTGAACCGCAGATTACGACTAATGATCTGCGTCTGATGTTGAGGCTGGCTCTTGCCGGCGGAGGAATAACAATTGCCACTCAGGAAACTTTCAGGCCATATATTGAAAGCGGTAAGCTTGTATCGCTGCTTGATGACTTTCTTCCACAATTTCCGGGCTTCTATCTGTATTTCCCACAGCGTCGCAATATTGCACCAAAGCTCCGCGCCCTGATTGACTACGTCAAAGAATGGCGGCAGCAATTGGCTTAA", + "dna_sequence_length": 339, + "id": "CDS_278", + "location": [ + [ + "NC_000913", + 297719, + "-", + 339 + ] + ], + "md5": "03b0bd127c18d2451e51b9c5161ae959", + "parent_gene": "", + "protein_md5": "be934510fb721b2ffb159edd671b4bc7", + "protein_translation": "HKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4508" + ], + [ + "gene_synonym", + "EcoGene:EG14496" + ], + [ + "gene_synonym", + "GeneID:7751634" + ], + [ + "gene_synonym", + "b4695" + ], + [ + "gene_synonym", + "yagP" + ], + [ + "gene_synonym", + "ykgT" + ] + ], + "dna_sequence": "ATGCCTGCCCCCGTCGTCCTGATCCTTGCGGCCGGGCGTGGAGAGTGCTTTCTCGCCTCCGGGGGAAATACCCATAAG", + "dna_sequence_length": 78, + "id": "CDS_279", + "location": [ + [ + "NC_000913", + 297791, + "-", + 78 + ] + ], + "md5": "fa34cd334e11adc2e0cb8bc4ba037afd", + "parent_gene": "", + "protein_md5": "b57f43c8ae7c6d236d30f78de96166f7", + "protein_translation": "MPAPVVLILAAGRGECFLASGGNTHK", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000984" + ], + [ + "gene_synonym", + "ECK0282" + ], + [ + "gene_synonym", + "EcoGene:EG13556" + ], + [ + "gene_synonym", + "GI:16128268" + ], + [ + "gene_synonym", + "GeneID:945010" + ], + [ + "gene_synonym", + "JW0277" + ], + [ + "gene_synonym", + "NP_414817.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77183" + ], + [ + "gene_synonym", + "b0283" + ], + [ + "gene_synonym", + "paoD" + ], + [ + "gene_synonym", + "yagQ" + ] + ], + "dna_sequence": "ATGTCATACCCGCTTTTTGACAAAGACGAACACTGGCATAAGCCAGAGCAGGCGTTTCTCACCGATGACCACCGGACCATTCTGCGCTTCGCCGTAGAGGCGCTAATGTCCGGTAAAGGAGCGGTGCTGGTGACGCTGGTGGAGATACGCGGCGGCGCGGCGCGCCCGCTCGGGGCGCAGATGGTGGTGCGCGAAGATGGTCGTTACTGCGGTTTTGTCTCTGGCGGCTGCGTGGAGGCCGCTGCCGCTTTTGAAGCGCTGGAGATGATGGGCTCAGGCCGCGATCGCGAAATTCGCTATGGCGAAGGTTCGCCGTGGTTTGACATCGTTCTGCCCTGCGGCGGTGGGATCACGCTGACGCTCCATAAACTACGCTCGGCACAGCCTCTGCTCGCCGTGCTGAACCGCCTGGAACAGAGAAAACCGGTGGGGCTGCGCTACGATCCGCAAGCACAATCGCTGGTGTGCCTGCCCACGCAAACCCGGACGGGCTGGAATCTCAATGGCTTTGAGGTGGGGTTCAGGCCATGCGTCAGGCTGATGATTTACGGACGTTCTCTTGAGGCGCAGGCAACCGCGAGTCTTGCAGCAGCCACAGGCTATGACAGCCATATCTTCGATCTTTTTCCGGCCTCAGCCAGCGCTCAGATCGATACCGATACGGCGGTCATTTTGCTGTGCCATGATCTCAACCGGGAGCTGCCAGTGTTGCAGGCCGCGCGAGAAGCAAAACCCTTTTATCTCGGCGCATTGGGCAGCTATCGAACCCACACGTTACGTCTGCAAAAGCTCCACGAGCTGGGATGGTCCAGGGAGGAAACAACGCAAATCCGGGCACCCGTCGGGATATTCCCCAAAGCCCGGGATGCGCATACTCTGGCACTCTCCGTGCTGGCAGAAGTCGCCTCTGTACGTCTCCATCAGGAGGAGGATTCATGCCTGCCCCCGTCGTCCTGA", + "dna_sequence_length": 957, + "functions": [ + "moco insertion factor for PaoABC aldehyde oxidoreductase" + ], + "id": "CDS_280", + "location": [ + [ + "NC_000913", + 298726, + "-", + 957 + ] + ], + "md5": "8fbd98cb634de6c71eda6db4bce82b6c", + "parent_gene": "", + "protein_md5": "705e074b4ab5f23d1bec82a9fd9819a0", + "protein_translation": "MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000988" + ], + [ + "gene_synonym", + "ECK0283" + ], + [ + "gene_synonym", + "EcoGene:EG13557" + ], + [ + "gene_synonym", + "GI:16128269" + ], + [ + "gene_synonym", + "GeneID:944961" + ], + [ + "gene_synonym", + "JW0278" + ], + [ + "gene_synonym", + "NP_414818.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77489" + ], + [ + "gene_synonym", + "b0284" + ], + [ + "gene_synonym", + "hsm" + ], + [ + "gene_synonym", + "paoC" + ], + [ + "gene_synonym", + "yagR" + ] + ], + "dna_sequence": "ATGAAATTTGATAAACCCGCAGGGGAAAACCCGATCGATCAGCTGAAGGTTGTCGGTCGTCCCCATGACCGCATCGACGGACCGCTGAAAACTACCGGCACGGCACGCTACGCCTACGAATGGCATGAAGAAGCCCCCAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATTGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGGCTGTCATTACCGCCAGTAACGCCGGGGCACTCGGCAAAGGCGACAAAAACACCGCCAGGCTGTTAGGCGGCCCCACTATTGAGCACTATCATCAGGCCATTGCGCTGGTAGTGGCCGAGACCTTCGAACAGGCGCGAGCGGCGGCCTCGCTGGTGCAGGCACACTATCGCCGTAATAAAGGAGCTTACTCCCTGGCGGACGAAAAACAGGCCGTCAATCAGCCGCCGGAAGACACGCCCGACAAAAACGTCGGTGACTTTGACGGGGCTTTCACCTCCGCTGCGGTGAAGATTGATGCTACCTACACGACCCCGGACCAGAGCCATATGGCGATGGAGCCGCATGCCTCGATGGCCGTCTGGGATGGAAATAAGCTTACCCTCTGGACCTCAAATCAGATGATTGACTGGTGCCGCACCGATCTGGCAAAAACGCTGAAAGTTCCCGTGGAGAATGTGCGTATTATCTCCCCGTATATCGGCGGAGGGTTTGGCGGCAAGCTGTTCCTGAGAAGCGATGCGCTGCTGGCGGCCCTCGCCGCCCGAGCGGTGAAACGTCCGGTTAAAGTGATGCTCCCCCGCCCCTCTATTCCCAATAACACCACGCACCGCCCCGCCACCCTTCAGCACTTGCGTATCGGTGCCGACCAGAGCGGGAAAATCACCGCTATCTCACATGAAAGCTGGTCTGGAAACCTGCCCGGCGGCACGCCGGAAACGGCGGTACAGCAAAGCGAATTACTCTACGCCGGGGCGAATCGTCATACCGGCCTGCGGCTCGCCACGCTTGATTTGCCGGAAGGGAACGCCATGCGTGCGCCCGGCGAAGCCCCCGGTCTGATGGCGCTCGAAATCGCGATCGACGAACTGGCGGAAAAAGCGGGCATCGATCCCGTCGAGTTTCGCATCCTGAATGACACTCAGGTTGACCCCGCCGACCCGACGCGCTGCTTCTCTCGCCGTCAGCTTATCGAGTGCTTGCGCACCGGAGCGGATAAATTTGGCTGGAAGCAGCGCAACGCCACACCCGGACAGGTGCGCGACGGGGAGTGGCTAGTCGGCCACGGTGTTGCGGCGGGCTTTCGCAATAATCTGCTGGAAAAATCGGGTGCTCGGGTTCACCTCGAACAAAACGGCACCGTTACCGTAGAAACGGACATGACCGACATTGGCACCGGCAGCTACACCATTCTGGCCCAGACGGCAGCGGAAATGCTTGGCGTACCGCTGGAGCAGGTTGCGGTTCACCTCGGCGATTCCAGTTTCCCGGTTTCTGCGGGTTCTGGTGGACAATGGGGCGCGAATACCTCCACCTCCGGCGTTTACGCCGCCTGTATGAAGCTTCGCGAAATGATTGCCTCGGCAGTCGGGTTTGATCCTGAGCAGTCGCAGTTTGCCGACGGCAAGATTACCAACGGTACCCGAAGCGCCACGCTACATGAAGCCACCGCAGGCGGCAGACTGACAGCGGAAGAGAGCATTGAATTCGGAACACTGAGCAAAGAGTACCAGCAGTCGACCTTTGCCGGGCATTTTGTGGAGGTCGGCGTGCATAGCGCGACGGGAGAAGTTCGGGTCCGGCGTATGCTCGCTGTGTGTGCTGCAGGACGCATCCTGAATCCGAAAACTGCGCGCAGCCAGGTCATTGGCGCAATGACTATGGGCATGGGCGCGGCACTGATGGAGGAGCTGGCGGTGGATGACCGTTTGGGCTACTTCGTTAATCACGATATGGCGGGGTATGAGGTGCCGGTTCATGCGGATATCCCAAAACAGGAGGTGATTTTCCTGGATGATACCGACCCCATATCCTCCCCGATGAAGGCCAAAGGTGTCGGTGAGCTGGGCCTGTGCGGCGTGAGCGCGGCTATCGCCAACGCGGTGTATAACGCCACCGGTATTCGGGTACGGGATTATCCCATCACTCTGGATAAGCTGCTCGATAAGCTGCCGGATGTGGTTTAA", + "dna_sequence_length": 2199, + "functions": [ + "PaoABC aldehyde oxidoreductase, Moco-containing subunit" + ], + "id": "CDS_281", + "location": [ + [ + "NC_000913", + 300934, + "-", + 2199 + ] + ], + "md5": "72b29092c077b52e72430b4f982cc337", + "parent_gene": "", + "protein_md5": "8a8e8d0553249eb93ae22aa3c45cbe43", + "protein_translation": "MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEEAPNAAYGYIVGSAIAKGRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGGPTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDKNVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRTDLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGGTPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDPADPTRCFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRNNLLEKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSSFPVSAGSGGQWGANTSTSGVYAACMKLREMIASAVGFDPEQSQFADGKITNGTRSATLHEATAGGRLTAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLPDVV", + "protein_translation_length": 732, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000990" + ], + [ + "gene_synonym", + "ECK0284" + ], + [ + "gene_synonym", + "EcoGene:EG13558" + ], + [ + "gene_synonym", + "GI:16128270" + ], + [ + "gene_synonym", + "GeneID:945710" + ], + [ + "gene_synonym", + "JW0279" + ], + [ + "gene_synonym", + "NP_414819.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77324" + ], + [ + "gene_synonym", + "b0285" + ], + [ + "gene_synonym", + "paoB" + ], + [ + "gene_synonym", + "yagS" + ] + ], + "dna_sequence": "ATGAAGGCGTTTACCTATGAACGAGTGAATACCCCAGCCGAGGCGGCACTTAGCGCTCAGCGCGTACCCGGCGCAAAATTTATCGCGGGCGGGACCAATCTGCTGGACCTGATGAAGCTGGAAATTGAAACGCCCACCCACCTTATCGATGTGAACGGCCTCGGGCTCGATAAGATTGAAGTGACCGACGCGGGTGGGCTGCGCATCGGCGCACTGGTACGGAACACCGACCTGGCGGCTCACGAGCGCGTGCGTCGTGATTACGCGGTACTCTCCCGCGCCCTGCTCGCTGGCGCGTCTGGTCAGTTACGTAATCAGGCAACCACCGCAGGTAATCTGCTCCAGCGCACGCGCTGCCCCTATTTTTACGACACCAATCAGCCCTGCAATAAGCGCCTGCCCGGGAGCGGCTGCGCGGCGCTTGAAGGCTTTAGCCGTCAGCACGCGGTGGTAGGCGTAAGCGAAGCCTGCATTGCCACCCATCCGAGCGATATGGCGGTCGCAATGCGGTTGCTGGATGCGGTGGTGGAAACCATCACGCCGGAGGGAAAGACTCGCAGTATCACACTGGCTGATTTTTATCACCCTCCGGGAAAAACGCCGCACATTGAAACCGCCCTGCTTCCCGGTGAGCTTATCGTTGCGGTGACGTTACCTCCACCGCTCGGCGGAAAACATATCTACCGTAAGGTGCGCGATCGCGCCTCCTACGCCTTTGCCCTGGTATCGGTCGCGGCGATTATTCAGCCTGACGGCAGCGGGCGCGTCGCGCTGGGCGGAGTAGCACATAAGCCCTGGCGCATTGAGGCTGCGGATGCTCAGCTATCCCAGGGGGCGCAGGCCGTATATGACACGCTGTTCGCCAGCGCCCATCCCACCGCTGAAAACACCTTTAAACTCCTGTTGGCGAAGCGAACGCTTGCCTCCGTACTGGCTGAAGCGAGGGCACAGGCATGA", + "dna_sequence_length": 957, + "functions": [ + "PaoABC aldehyde oxidoreductase, FAD-containing subunit" + ], + "id": "CDS_282", + "location": [ + [ + "NC_000913", + 301887, + "-", + 957 + ] + ], + "md5": "cf6da5421681a88aa6dd0eeecc6f22fd", + "parent_gene": "", + "protein_md5": "2ae497564efa052e9c9610acd5f4aee8", + "protein_translation": "MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIETPTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQLRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIATHPSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTLPPPLGGKHIYRKVRDRASYAFALVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLSQGAQAVYDTLFASAHPTAENTFKLLLAKRTLASVLAEARAQA", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000992" + ], + [ + "gene_synonym", + "ECK0285" + ], + [ + "gene_synonym", + "EcoGene:EG13559" + ], + [ + "gene_synonym", + "GI:16128271" + ], + [ + "gene_synonym", + "GeneID:945330" + ], + [ + "gene_synonym", + "JW0280" + ], + [ + "gene_synonym", + "NP_414820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77165" + ], + [ + "gene_synonym", + "b0286" + ], + [ + "gene_synonym", + "paoA" + ], + [ + "gene_synonym", + "yagT" + ] + ], + "dna_sequence": "ATGAGCAACCAAGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTAAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACAGCGGCGACCGCCGTGGTTTATCCTCATTCTACGCTGGCGGCAAGCGTTCCGGCAGCTACACCCGCGCCAGAGATAATGCCCCTGACACTGAAGGTGAACGGCAAAACCGAGCAGCTTGAGGTGGATACCCGAACCACGCTACTGGACACTTTGCGTGAAAATCTGCATTTGATCGGTACCAAGAAAGGTTGCGATCACGGACAGTGCGGAGCCTGTACCGTGCTGGTCAATGGTCGCAGGCTTAATGCCTGCCTGACGCTTGCAGTCATGCATCAGGGGGCCGAGATCACCACCATTGAAGGCCTGGGTTCGCCAGATAATCTTCACCCCATGCAGGCGGCCTTTATCAAGCATGATGGCTTCCAGTGCGGCTACTGCACCTCCGGGCAAATTTGCTCATCAGTAGCGGTGCTAAAAGAGATTCAGGACGGCATTCCCAGTCACGTCACGGTCGATTTGGTTTCCGCTCCAGAAACAACTGCCGATGAGATCCGTGAACGTATGAGCGGCAACATCTGTCGCTGTGGTGCATACGCTAACATCCTTGCCGCCATTGAAGATGCTGCGGGGGAGATAAAATCATGA", + "dna_sequence_length": 690, + "functions": [ + "PaoABC aldehyde oxidoreductase, 2Fe-2S subunit" + ], + "id": "CDS_283", + "location": [ + [ + "NC_000913", + 302573, + "-", + 690 + ] + ], + "md5": "8b62a3680fe9faa4b16dcd0d08b6fbf4", + "parent_gene": "", + "protein_md5": "5cc5ee9665ec3b972d55c960e92d608d", + "protein_translation": "MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000995" + ], + [ + "gene_synonym", + "ECK0286" + ], + [ + "gene_synonym", + "EcoGene:EG13560" + ], + [ + "gene_synonym", + "GI:16128272" + ], + [ + "gene_synonym", + "GeneID:945677" + ], + [ + "gene_synonym", + "JW0281" + ], + [ + "gene_synonym", + "NP_414821.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAA1" + ], + [ + "gene_synonym", + "b0287" + ], + [ + "gene_synonym", + "yagU" + ] + ], + "dna_sequence": "ATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAGTGGGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCACCGTATATTTTTCTTCGAGACTGGTTGGGGCTGACAGATCCCAATGCGGCTGTTTATACCTTTGCCGGGCATGTCTTTAACTGGGTTGGTGTTACGCACATTATCTTTTCGATAGTGTTTGCTGTCGGTTATTGTGTGGTCGCTGAAGTATTTCCAAAAATTAAACTCTGGCAGGGCTTACTGGCAGGTGCTTTAGCCCAACTTTTTGTTCATATGATTTCATTCCCTCTCATGGGACTGACGCCACCTCTGTTTGATCTCCCGTGGTATGAGAATGTTTCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAA", + "dna_sequence_length": 615, + "functions": [ + "DUF1440 family inner membrane acid resistance protein" + ], + "id": "CDS_284", + "location": [ + [ + "NC_000913", + 302991, + "+", + 615 + ] + ], + "md5": "774c888372b72461680d507fb14ac873", + "parent_gene": "", + "protein_md5": "401df03ac6e518ec8fd3816bc4874931", + "protein_translation": "MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000997" + ], + [ + "gene_synonym", + "ECK0287" + ], + [ + "gene_synonym", + "EcoGene:EG14323" + ], + [ + "gene_synonym", + "GI:16128273" + ], + [ + "gene_synonym", + "GeneID:945905" + ], + [ + "gene_synonym", + "JW0282" + ], + [ + "gene_synonym", + "NP_414822.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAL9" + ], + [ + "gene_synonym", + "b0288" + ], + [ + "gene_synonym", + "ykgJ" + ] + ], + "dna_sequence": "ATGAGCAATCTGAATCCATGCATGACGTGTGGTGCCTGTTGTGCATTTTTCCGCGTCTCTTTTTACTGGGCCGAAGCCGACGATGCTGGCGGTACTATTCCCGCCAGGCTCACTGAACAAATATCCCCTTTTCACCGATGCATGAGCGGTACCAATCAGAAAAACCCCCGATGTATTGCCCTTGCAGGAACCCCGGGCAAAAATGCCTGCTGCACGATATATAAAAATCGATCGTCCACATGCAGAGAATTCGCCATGTCTGGTGAGAACGGAGTCGTCAATGAGGCTTGCAATCGTGCAAGGGCTAAATACGGGCTGACACCGTTATAA", + "dna_sequence_length": 330, + "functions": [ + "UPF0153 cysteine cluster protein" + ], + "id": "CDS_285", + "location": [ + [ + "NC_000913", + 304182, + "-", + 330 + ] + ], + "md5": "21b9ae3e5b82650ed83f6ee4f04e9fce", + "parent_gene": "", + "protein_md5": "ad6491738862cd4bb7dd568c25ba802a", + "protein_translation": "MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001000" + ], + [ + "gene_synonym", + "ECK0288" + ], + [ + "gene_synonym", + "EcoGene:EG13561" + ], + [ + "gene_synonym", + "GI:90111108" + ], + [ + "gene_synonym", + "GeneID:946631" + ], + [ + "gene_synonym", + "JW5030" + ], + [ + "gene_synonym", + "NP_414823.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77263" + ], + [ + "gene_synonym", + "b0289" + ], + [ + "gene_synonym", + "ecpE" + ], + [ + "gene_synonym", + "matF" + ], + [ + "gene_synonym", + "yagV" + ] + ], + "dna_sequence": "ATGTTCAGGCGACGTGGCGTAACATTAACTAAGGCCCTGCTGACAGCGGTCTGTATGCTGGCGGCACCTTTGACACAGGCGATTTCGGTCGGCAATCTGACATTTTCGCTGCCGTCCGAGACTGACTTTGTCAGCAAACGTGTAGTGAATAACAACAAAAGCGCACGGATATACCGTATTGCCATCAGTGCTATTGATAGCCCGGGCAGCAGTGAATTGCGCACCCGACCGGTGGATGGTGAACTGCTTTTCGCCCCCCGCCAGCTGGCGTTGCAGGCTGGTGAGAGCGAGTATTTTAAATTTTACTATCATGGTCCACGGGATAACCGCGAGCGCTACTACCGGGTCTCATTTCGCGAGGTCCCCACTCGTAACCATACAAGACGCAGCCCAACCGGCGGCGTGGTCAGCACGGAGCCGGTGGTGGTGATGGATACCATTCTGGTAGTACGACCACGTCAGGTTCAGTTTAAATGGTCCTTCGACAAGGTGACAGGAACGGTAAGTAACACTGGCAACACATGGTTTAAGCTACTGATTAAGCCAGGATGTGATTCGACCGAAGAGGAAGGCGATGCCTGGTATCTACGTCCGGGAGACGTGGTTCATCAGCCTGAGTTACGTCAGCCGGGGAATCACTATCTGGTCTATAACGACAAATTCATTAAGATTAGCGATTCCTGTCCGGCTAAGCCCCCTTCGGCGGACTAA", + "dna_sequence_length": 711, + "functions": [ + "ECP production pilus chaperone" + ], + "id": "CDS_286", + "location": [ + [ + "NC_000913", + 305205, + "-", + 711 + ] + ], + "md5": "9d9c171315e7cd8dae2242f2113b95c5", + "parent_gene": "", + "protein_md5": "c702368c5aab7f5f3ee56905d0a4070c", + "protein_translation": "MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNHTRRSPTGGVVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001002" + ], + [ + "gene_synonym", + "ECK0289" + ], + [ + "gene_synonym", + "EcoGene:EG13562" + ], + [ + "gene_synonym", + "GI:16128275" + ], + [ + "gene_synonym", + "GeneID:947349" + ], + [ + "gene_synonym", + "JW0284" + ], + [ + "gene_synonym", + "NP_414824.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77694" + ], + [ + "gene_synonym", + "b0290" + ], + [ + "gene_synonym", + "ecpD" + ], + [ + "gene_synonym", + "matE" + ], + [ + "gene_synonym", + "yagW" + ] + ], + "dna_sequence": "ATGAGAGTTAACCTACTAATAACGATGATAATTTTCGCGCTAATCTGGCCAGTAACTGCGCTCAGAGCGGCAGTGAGCAAAACAACCTGGGCGGATGCACCGGCACGCGAGTTTGTGTTTGTCGAAAACAACTCAGACGACAACTTTTTCGTCACTCCTGGCGGGGCGCTGGATCCGCGCCTGACCGGTGCCAACCGCTGGACCGGTTTAAAATACACTGGTTCAGGAACCATCTATCAGCAAAGCCTCGGCTACATTGATAACGGTTACAACACCGGCCTTTATACCAACTGGAAGTTTGATATGTGGCTGGAAAATTCACCAGTTTCATCTCCTTTAACTGGCTTGCGCTGCATCAACTGGTACGCTGGGTGTAATATGACCACCAGTCTTATCCTGCCGCAAACCACCGACGCCAGTGGATTTTATGGCGCGACGGTGACCAGCGGCGGCGCGAAGTGGATGCACGGCATGTTGTCAGACGCGTTTTACCAGTATATGCAACAAATGCCCGTCGGCAGCAGCTTTACAATGACCATCAATGCCTGCCAGACCTCTGTGAACTATGACGCCAGCAGCGGCGCACGCTGTAAGGATCAGGCCTCCGGCAACTGGTATGTTCGCAACGTCACCCATACGAAAGCAGCAAATCTACGGTTGATAAATACCCACTCGCTGGCGGAAGTATTTATCAACAGCGACGGAGTACCGACTCTGGGCGAAGGGAACGCCGACTGCCGGACGCAAACCATCGGCAGCCGTTCAGGATTAAGTTGTAAGATGGTTAACTATACCCTGCAAACAAACGGACTCAGCAACACCTCAATCCATATATTCCCGGCGATCGCCAACTCGTCGTTAGCCTCGGCCGTCGGGGCGTACGATATGCAGTTCAGTCTGAATGGCAGTTCATGGAAACCGGTGAGCAATACCGCCTATTACTACACCTTCAACGAGATGAAGAGCGCAGACTCGATCTATGTTTTCTTCTCGAGCAACTTCTTTAAGCAGATGGTGAACCTCGGGATCAGCGATATCAACACCAAAGATCTATTCAACTTTCGCTTTCAGAACACCACATCACCGGAGTCTGGCTGGTATGAATTTTCTACCTCCAACACGCTGATTATCAAACCCCGTGATTTCAGCATCAGTATTATCTCCGATGAATATACTCAGACACCGTCGCGGGAGGGATATGTTGGCAGCGGCGAGTCGGCACTCGATTTCGGCTATATCGTAACCACCAGCGGTAAAACAGCTGCCGACGAAGTGCTGATCAAGGTGACCGGACCCGCGCAGGTGATTGGCGGGCGCTCCTATTGTGTCTTCAGCTCCGATGACGGTAAGGCGAAAGTACCGTTCCCGGCGACACTTTCCTTTATTACCCGCAACGGAGCTACAAAAACCTACGATGCCGGGTGCGATGATAGCTGGCGGGATATGACCGATGCGCTGTGGTTGACCACACCGTGGACTGATATCTCTGGCGAAGTGGGGCAGATGGATAAGACCACAGTCAAATTTTCGATTCCAATGGATAACGCCATTTCGCTGCGTACGGTAGATGATAACGGCTGGTTTGGCGAAGTCAGCGCTTCAGGAGAGATTCATGTTCAGGCGACGTGGCGTAACATTAACTAA", + "dna_sequence_length": 1644, + "functions": [ + "polymerized tip adhesin of ECP fibers" + ], + "id": "CDS_287", + "location": [ + [ + "NC_000913", + 306817, + "-", + 1644 + ] + ], + "md5": "67d0e88c3f0b8c5be56f83768aeff6ad", + "parent_gene": "", + "protein_md5": "291a4e5b21a2a7f383fa2446b4b338a0", + "protein_translation": "MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN", + "protein_translation_length": 547, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001005" + ], + [ + "gene_synonym", + "ECK0290" + ], + [ + "gene_synonym", + "EcoGene:EG13563" + ], + [ + "gene_synonym", + "GI:16128276" + ], + [ + "gene_synonym", + "GeneID:947606" + ], + [ + "gene_synonym", + "JW0285" + ], + [ + "gene_synonym", + "NP_414825.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77802" + ], + [ + "gene_synonym", + "b0291" + ], + [ + "gene_synonym", + "ecpC" + ], + [ + "gene_synonym", + "matD" + ], + [ + "gene_synonym", + "yagX" + ] + ], + "dna_sequence": "ATGCCTTTACGACGGTTCTCCCCAGGACTGAAAGCCCAGTTTGCCTTCGGCATGGTCTTTTTGTTCGTTCAGCCCGATGCCAGCGCTGCTGACATAAGTGCGCAGCAAATAGGTGGGGTGATTATTCCGCAGGCCTTCAGTCAGGCGCTTCAGGACGGCATGAGCGTCCCGCTCTATATTCATCTCGCCGGTAGCCAGGGTCGCCAGGACGATCAGCGAATCGGCAGCGCTTTTATCTGGCTGGACGATGGACAGCTACGCATCCGGAAAATACAGCTGGAAGAGAGTGAAGATAACGCCAGTGTCAGCGAACAAACTCGACAGCAGCTGATGGCTCTGGCCAACGCCCCGTTCAATGAGGCCCTTACCATCCCCCTGACTGACAACGCGCAGCTGGATCTCAGCTTGCGCCAACTGCTGCTGCAGCTAGTGGTCAAGCGCGAAGCGCTGGGCACCGTACTACGCTCACGTAGCGAAGACATCGGGCAGTCCAGTGTTAACACCCTCAGCAGTAATCTGAGCTATAACTTGGGCGTCTATAACAACCAGTTGCGTAACGGCGGGAGCAACACATCCAGCTATCTGTCGCTGAATAACGTTACTGCACTGCGCGAACATCATGTGGTGCTCGACGGCTCGCTGTACGGGATCGGTAGCGGTCAACAGGACAGTGAATTATATAAAGCGATGTATGAACGCGATTTTGCCGGTCACCGATTTGCCGGTGGAATGCTCGACACCTGGAACTTGCAGTCCTTAGGGCCGATGACCGCCATTTCAGCAGGGAAGATTTACGGCCTTTCCTGGGGAAACCAGGCCAGCTCCACCATCTTCGACAGCAGCCAGTCAGCCACGCCAGTGATCGCCTTTTTACCGGCGGCGGGCGAAGTACATCTCACCCGTGATGGGCGGCTACTAAGCGTTCAGAACTTCACTATGGGCAATCATGAAGTGGATACCCGGGGTCTACCGTACGGGATTTACGATGTGGAAGTTGAGGTGATCGTTAACGGTCGCGTGATCAGCAAACGCACCCAGCGGGTCAATAAGCTGTTTAGCCGGGGGCGCGGCGTCGGTGCACCACTGGCGTGGCAGGTATGGGGCGGTAGCTTTCATATGGATCGCTGGTCGGAAAACGGGAAAAAGACGCGACCAGCTAAAGAGAGTTGGCTAGCAGGTGCCTCGACCTCCGGCTCATTGAGTACGCTTAGCTGGGCGGCAACGGGATATGGATACGATAATCAGGCGGTGGGTGAAACCCGTCTGACGCTGCCGCTTGGGGGGGCGATCAACGTTAACCTGCAAAATATGCTGGCCAGTGACAGCTCATGGAGCAGCATCGGCAGCATCAGCGCCACTCTACCGGGAGGCTTTAGTTCGCTGTGGGTTAATCAGGAAAAAACCCGCATTGGCAATCAATTGCGACGTAGCGATGCCGACAACCGTGCAATCGGCGGCACACTCAACCTGAACTCACTGTGGTCGAAGCTGGGCACATTCAGCATCAGCTACAATGATGACCGCCGTTACAACAGCCATTATTACACGGCAGATTACTATCAAAATGTCTACAGCGGTACCTTTGGTTCGCTTGGCCTGCGGGCCGGTATTCAGCGCTATAACAACGGCGACAGCAACGCCAATACAGGAAAATATATCGCTCTCGATCTCTCGCTACCACTGGGCAACTGGTTTAGCGCAGGGATGACTCATCAAAACGGCTACACCATGGCAAACCTGTCAGCACGCAAACAGTTTGATGAAGGAACCATTCGCACTGTTGGTGCCAATCTGTCACGTGCCATCTCCGGCGATACCGGTGATGACAAAACCCTCAGCGGCGGGGCGTATGCACAATTCGACGCTCGTTACGCCAGCGGAACGCTGAACGTCAATAGCGCGGCGGACGGCTACGTCAATACCAACTTGACCGCCAATGGCAGCGTCGGCTGGCAGGGTAAAAACATTGCTGCCAGCGGGCGGACTGATGGCAACGCTGGGGTGATATTCAACACCGGGCTGGAGGACGACGGTCAGATCAGCGCCAAAATCAACGGGCGGATTTTCCCGCTTAACGGCAAGCGTAACTATCTCCCGCTCTCTCCCTATGGAAGATATGAGGTGGAGTTACAGAACAGCAAAAACTCACTCGACAGTTACGATATCGTCAGCGGCCGCAAAAGTCGTCTGACTCTCTATCCAGGCAATGTCGCTGTCATTGAGCCAGAGGTGAAGCAGATGGTTACCGTCTCCGGTCGTATCCGTGCGGAAGACGGCACACTGCTGGCTAACGCACGGATTAACAACCATATCGGCCGAACCCGAACCGATGAAAACGGCGAGTTTGTCATGGACGTGGATAAGAAATACCCCACTATCGATTTTCGCTACAGTGGCAATAAAACCTGCGAAGTGGCTCTGGAACTCAACCAGGCGCGCGGTGCCGTCTGGGTCGGTGATGTGGTCTGCAGCGGCCTCTCATCGTGGGCGGCGGTGACGCAGACAGGAGAAGAGAATGAGAGTTAA", + "dna_sequence_length": 2526, + "functions": [ + "ECP production outer membrane protein" + ], + "id": "CDS_288", + "location": [ + [ + "NC_000913", + 309332, + "-", + 2526 + ] + ], + "md5": "02ab1f60c102785685205409957d3051", + "parent_gene": "", + "protein_md5": "cebd2000775fa33cbe6fb7c32c8a9f11", + "protein_translation": "MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES", + "protein_translation_length": 841, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001007" + ], + [ + "gene_synonym", + "ECK0291" + ], + [ + "gene_synonym", + "EcoGene:EG13564" + ], + [ + "gene_synonym", + "GI:16128277" + ], + [ + "gene_synonym", + "GeneID:948806" + ], + [ + "gene_synonym", + "JW0286" + ], + [ + "gene_synonym", + "NP_414826.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77188" + ], + [ + "gene_synonym", + "b0292" + ], + [ + "gene_synonym", + "ecpB" + ], + [ + "gene_synonym", + "matC" + ], + [ + "gene_synonym", + "yagY" + ] + ], + "dna_sequence": "ATGAAAAAGCACCTTCTGCCTCTCGCTCTGCTGTTTTCCGGAATATCTCCGGCCCAGGCGCTGGATGTCGGCGATATATCATCGTTTATGAACAGTGACAGCAGCACGCTGAGCAAAACGATCAAAAACAGTACCGACAGTGGTCGCCTTATCAATATCCGTCTCGAACGGCTCTCTTCACCGCTTGACGACGGGCAGGTTATCTCAATGGACAAGCCGGATGAGTTGCTACTCACTCCCGCCAGCTTGCTGCTACCCGCCCAAGCCAGCGAAGTGATCCGCTTCTTCTATAAGGGACCCGCAGATGAAAAAGAGCGCTACTACCGCATTGTCTGGTTTGATCAGGCCCTCAGTGATGCGCAGCGCGATAATGCCAACCGCAGCGCTGTGGCCACTGCTTCCGCCCGCATCGGCACCATTCTGGTCGTCGCCCCTCGTCAGGCGAACTACCACTTTCAGTACGCCAACGGCTCCCTGACAAATACAGGAAATGCGACGCTGCGGATCCTCGCCTACGGACCTTGCCTGAAAGCCGCCAACGGTAAGGAGTGTAAAGAGAATTACTACCTGATGCCGGGCAAGTCGCGTCGTTTTACCCGCGTGGACACTGCGGATAACAAAGGACGGGTTGCACTTTGGCAGGGTGATAAGTTCATTCCCGTGAAATAG", + "dna_sequence_length": 669, + "functions": [ + "ECP production pilus chaperone" + ], + "id": "CDS_289", + "location": [ + [ + "NC_000913", + 310026, + "-", + 669 + ] + ], + "md5": "5dabb99c722d04f261ddb63bee469bfe", + "parent_gene": "", + "protein_md5": "9a16b865bd37f58d5d9b3ace9b42f85b", + "protein_translation": "MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001009" + ], + [ + "gene_synonym", + "ECK0292" + ], + [ + "gene_synonym", + "EcoGene:EG13565" + ], + [ + "gene_synonym", + "GI:16128278" + ], + [ + "gene_synonym", + "GeneID:948759" + ], + [ + "gene_synonym", + "JW0287" + ], + [ + "gene_synonym", + "NP_414827.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAA3" + ], + [ + "gene_synonym", + "b0293" + ], + [ + "gene_synonym", + "ecpA" + ], + [ + "gene_synonym", + "matB" + ], + [ + "gene_synonym", + "yagZ" + ] + ], + "dna_sequence": "ATGAAAAAAAAGGTTCTGGCAATAGCTCTGGTAACGGTGTTTACCGGCATGGGTGTGGCGCAGGCTGCTGACGTAACAGCTCAGGCTGTAGCGACCTGGTCGGCAACAGCCAAAAAAGACACCACCAGTAAGCTGGTTGTGACGCCACTCGGTAGCCTGGCGTTCCAGTATGCCGAAGGCATTAAAGGTTTTAACTCACAGAAAGGTCTATTTGACGTGGCTATCGAGGGTGACTCAACGGCTACCGCCTTTAAACTGACCTCACGTCTTATCACCAACACATTAACCCAGTTGGATACCTCAGGTTCCACACTGAATGTGGGCGTGGATTATAACGGCGCGGCAGTCGAAAAAACTGGCGATACCGTGATGATCGATACCGCCAACGGCGTACTGGGCGGCAACCTTAGCCCGCTGGCTAACGGTTACAATGCCAGCAATCGTACCACCGCACAGGATGGTTTCACCTTCTCCATCATCAGCGGTACCACCAATGGTACCACCGCAGTAACAGATTACAGCACTCTACCGGAAGGCATCTGGAGCGGCGACGTTAGCGTACAGTTCGACGCGACCTGGACCAGTTAA", + "dna_sequence_length": 588, + "functions": [ + "ECP pilin" + ], + "id": "CDS_290", + "location": [ + [ + "NC_000913", + 310671, + "-", + 588 + ] + ], + "md5": "0a580c4336e3fcec31ccd3caf5fd059a", + "parent_gene": "", + "protein_md5": "0250374e0b605ee294a7833edc6af233", + "protein_translation": "MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001011" + ], + [ + "gene_synonym", + "ECK0293" + ], + [ + "gene_synonym", + "EcoGene:EG14324" + ], + [ + "gene_synonym", + "GI:16128279" + ], + [ + "gene_synonym", + "GeneID:944966" + ], + [ + "gene_synonym", + "JW5031" + ], + [ + "gene_synonym", + "NP_414828.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71301" + ], + [ + "gene_synonym", + "b0294" + ], + [ + "gene_synonym", + "ecpR" + ], + [ + "gene_synonym", + "matA" + ], + [ + "gene_synonym", + "ykgK" + ] + ], + "dna_sequence": "GTGACATGGCAAAGTGATTACAGTAGGGACTATGAGGTTAAAAACCATATGGAATGTCAAAACCGTTCTGATAAATACATCTGGTCTCCCCATGACGCCTACTTCTATAAAGGACTATCTGAACTGATTGTGGATATCGACAGATTAATTTATCTATCGTTGGAGAAAATTAGAAAAGATTTCGTGTTTATCAATCTCAGTACGGATTCTTTATCTGAATTTATAAACCGTGATAATGAATGGTTATCCGCGGTAAAGGGGAAACAGGTCGTATTGATTGCGGCCAGAAAGTCAGAGGCCTTAGCAAATTATTGGTATTACAATAGCAATATTAGGGGCGTGGTATACGCTGGACTGAGTCGTGATATTAGAAAAGAACTGGTCTATGTGATTAATGGCAGGTTCCTGAGAAAAGATATTAAGAAAGATAAAATCACGGACCGGGAAATGGAAATTATCCGCATGACGGCCCAGGGAATGCAACCTAAATCGATTGCCAGAATTGAAAATTGTAGTGTGAAGACAGTGTATACCCATCGGCGTAATGCTGAGGCCAAGCTGTACTCAAAAATATATAAGTTGGTTCAGTAA", + "dna_sequence_length": 591, + "functions": [ + "putative transcriptional regulator for the ecp operon" + ], + "id": "CDS_291", + "location": [ + [ + "NC_000913", + 311336, + "-", + 591 + ] + ], + "md5": "2c8bdd7d7b89d696c73576bdd74730f2", + "parent_gene": "", + "protein_md5": "c76e4213847eeeb77e296dea5ba48e15", + "protein_translation": "MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELVYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001019" + ], + [ + "gene_synonym", + "ECK0294" + ], + [ + "gene_synonym", + "EcoGene:EG14325" + ], + [ + "gene_synonym", + "GI:16128280" + ], + [ + "gene_synonym", + "GeneID:944962" + ], + [ + "gene_synonym", + "JW5033" + ], + [ + "gene_synonym", + "NP_414829.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56257" + ], + [ + "gene_synonym", + "b0295" + ], + [ + "gene_synonym", + "ykgL" + ] + ], + "dna_sequence": "ATGCAGGCTGCGCCGCAAAGGGAGGAGACTGAGTGGCGTGTTCAGTCTAAAAGAGGGTTGATGCCAGCATACAGGGGCGAAGCTGGTCAACAAGTCAACATTAAGATAATGGAATATTCGGAGAGAAACGTCAGGCAGTTGGCCTCAAATGAACAGGAAGAATATATCCCCAGGAAAATTAATGTTGGTGTTATAAACACACCAACATTAATCCGATCTGATTATTAA", + "dna_sequence_length": 228, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_292", + "location": [ + [ + "NC_000913", + 312112, + "+", + 228 + ] + ], + "md5": "96af576be5b5e04bf2ffb7e48e4ef560", + "parent_gene": "", + "protein_md5": "043dcc3b0fa38e1433ad27639e6f71d5", + "protein_translation": "MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNVRQLASNEQEEYIPRKINVGVINTPTLIRSDY", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285027" + ], + [ + "gene_synonym", + "ECK0295" + ], + [ + "gene_synonym", + "EcoGene:EG14432" + ], + [ + "gene_synonym", + "GI:94541137" + ], + [ + "gene_synonym", + "GeneID:1450238" + ], + [ + "gene_synonym", + "JW5034" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEQ2" + ], + [ + "gene_synonym", + "YP_588437.1" + ], + [ + "gene_synonym", + "b4506" + ], + [ + "gene_synonym", + "rpmJ2" + ], + [ + "gene_synonym", + "ykgO" + ] + ], + "dna_sequence": "ATGAAAGTTCTTAACTCTCTGCGTACCGCAAAAGAACGCCATCCAGACTGTCAGATTGTGAAGCGAAAAGGACGGCTATATGTGATTTGTAAATCTAATCCACGTTTTAAGGCCGTTCAGGGTCGTAAGAAAAAACGTTGA", + "dna_sequence_length": 141, + "functions": [ + "RpmJ-like protein" + ], + "id": "CDS_293", + "location": [ + [ + "NC_000913", + 312514, + "-", + 141 + ] + ], + "md5": "fd8d66224be10f4fd1b7e78a54a368f1", + "parent_gene": "", + "protein_md5": "9515c84ce0e80ff58be67c618687cc3d", + "protein_translation": "MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001021" + ], + [ + "gene_synonym", + "ECK0296" + ], + [ + "gene_synonym", + "EcoGene:EG14326" + ], + [ + "gene_synonym", + "GI:16128281" + ], + [ + "gene_synonym", + "GeneID:944960" + ], + [ + "gene_synonym", + "JW5035" + ], + [ + "gene_synonym", + "NP_414830.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7N1" + ], + [ + "gene_synonym", + "b0296" + ], + [ + "gene_synonym", + "rpmE2" + ], + [ + "gene_synonym", + "ykgM" + ] + ], + "dna_sequence": "ATGAAGCCCAATATCCATCCTGAGTATCGTACTGTGGTGTTCCACGACACCAGTGTTGATGAGTACTTTAAAATCGGCTCGACTATCAAAACAGACCGTGAGATTGAGCTGGATGGCGTAACGTATCCATACGTGACAATTGATGTCTCTTCTAAATCGCACCCGTTCTATACAGGGAAGCTGAGAACAGTGGCATCAGAAGGAAATGTTGCACGATTCACCCAACGTTTTGGTCGTTTTGTTAGCACGAAAAAGGGGGCGTGA", + "dna_sequence_length": 264, + "functions": [ + "50S ribosomal protein L31 type B", + "alternative zinc-limitation L31 protein" + ], + "id": "CDS_294", + "location": [ + [ + "NC_000913", + 312777, + "-", + 264 + ] + ], + "md5": "a5c2a25e3138d4b8bc5d9173600f3b58", + "parent_gene": "", + "protein_md5": "7d0734f54a1b7a2cf2bdb32fc5b937b2", + "protein_translation": "MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4486" + ], + [ + "gene_synonym", + "EcoGene:EG14476" + ], + [ + "gene_synonym", + "GI:226524699" + ], + [ + "gene_synonym", + "GeneID:7751635" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P5Z8" + ], + [ + "gene_synonym", + "YP_002791238.1" + ], + [ + "gene_synonym", + "b4671" + ], + [ + "gene_synonym", + "ykgR" + ] + ], + "dna_sequence": "ATGAAAGAGAATAAAGTACAGCAAATCAGTCATAAACTGATTAATATCGTTGTTTTTGTCGCAATTGTAGAATACGCCTATTTATTTCTCCATTTCTATTAA", + "dna_sequence_length": 102, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_295", + "location": [ + [ + "NC_000913", + 313242, + "-", + 102 + ] + ], + "md5": "c0ca5c9137fa94e4cb503e8f2f9815ad", + "parent_gene": "", + "protein_md5": "5ccaa8c288aec28506e2e79fea95ee9f", + "protein_translation": "MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY", + "protein_translation_length": 33, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4446" + ], + [ + "gene_synonym", + "EcoGene:EG14433" + ], + [ + "gene_synonym", + "GeneID:5625556" + ], + [ + "gene_synonym", + "b4630" + ], + [ + "gene_synonym", + "ykgP" + ] + ], + "dna_sequence": "CAACTTGTTCATGAATTAACCATTCCGGATAAACTATGGGATCAAATTCAGGCATCGAAAGGAACTGGCTGGTTTCCGTTAATGGATTAA", + "dna_sequence_length": 90, + "id": "CDS_296", + "location": [ + [ + "NC_000913", + 313805, + "-", + 90 + ] + ], + "md5": "b80fd46e0c6c82aae36da375f5165ab4", + "parent_gene": "", + "protein_md5": "c5305c0fecd7f733cc80872d68639b31", + "protein_translation": "QLVHELTIPDKLWDQIQASKGTGWFPLMD", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001025" + ], + [ + "gene_synonym", + "ECK0297" + ], + [ + "gene_synonym", + "EcoGene:EG12161" + ], + [ + "gene_synonym", + "GeneID:944957" + ], + [ + "gene_synonym", + "JW0291" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36943" + ], + [ + "gene_synonym", + "b0297" + ], + [ + "gene_synonym", + "eaeH" + ] + ], + "dna_sequence": "ATGTCACATTATAAAACAGGTCATAAACAACCACGATTTCGTTATTCAGTTCTGGCCCGCTGCGTGGCGTGGGCAAATATCTCTGTTCAGGTTCTTTTTCCACTCGCTGTCACCTTTACCCCAGTAATGGCGGCACGTGCGCAGCATGCGGTTCAGCCACGGTTGAGCATGGGAAATACTACGGTAACTGCTGATAATAACGTGGAGAAAAATGTCGCGTCGTTTGCCGCAAATGCCGGGACATTTTTAAGCAGTCAGCCAGATAGCGATGCGACACGTAACTTTATTACCGGAATGGCCACAGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTCACTCAGGGGGCAATACATCGTACAGACGATCGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCC", + "dna_sequence_length": 872, + "id": "CDS_297", + "location": [ + [ + "NC_000913", + 314357, + "+", + 872 + ] + ], + "md5": "831e6cb7967d9cbc773d0adfe91af18a", + "parent_gene": "", + "protein_md5": "7d279f2b07e523e117fc2ed4ef09ec5f", + "protein_translation": "MSHYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMAARAQHAVQPRLSMGNTTVTADNNVEKNVASFAANAGTFLSSQPDSDATRNFITGMATAKANQEIQEWLGKYGTARVKLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDDRTQSNIGFGWRHFSGNDWMAGVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDIEDYQERPANGWDIRAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAISAEVTYTPV", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001028" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524700" + ], + [ + "gene_synonym", + "GeneID:944952" + ], + [ + "gene_synonym", + "NP_414832.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF66" + ], + [ + "gene_synonym", + "b0298" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_298", + "location": [ + [ + "NC_000913", + 315291, + "+", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001030" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16128284" + ], + [ + "gene_synonym", + "GeneID:944948" + ], + [ + "gene_synonym", + "NP_414833.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF79" + ], + [ + "gene_synonym", + "b0299" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", + "dna_sequence_length": 867, + "functions": [ + "IS3 transposase B" + ], + "id": "CDS_299", + "location": [ + [ + "NC_000913", + 315587, + "+", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001032" + ], + [ + "gene_synonym", + "ECK0300" + ], + [ + "gene_synonym", + "EcoGene:EG13381" + ], + [ + "gene_synonym", + "GeneID:944956" + ], + [ + "gene_synonym", + "JW5037" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77601" + ], + [ + "gene_synonym", + "b0300" + ], + [ + "gene_synonym", + "ykgA" + ] + ], + "dna_sequence": "GTGCGATATGACAAAGAATTAACGGAGAATGAGATGATCAGGCAGAAGATTCTACAGCAGCTCCTGGAGTGGATTGAGTGCAATCTTGAGCACCCTATTTCAATCGAAGATATCGCACAGAAATCTGGCTACAGCAGACGCAACATCCAGCTTCTGTTCCGAAATTTCATGCATGTGCCTTTGGGAGAATACATTCGCAAACGAAGGCTTTGTCGTGCCGCCATTCTTGTCCGGCTCACCGCGAAATCTATGCTTGATATTGCACTCTCTTTGCATTTTGATTCACAGCAGTCATTCAGCCGCGAATTTAAAAAGTTATTCGGCTGCTCTCCCCGTGAATACCGCCACCGTGATTATTGGGATCTCGCAAATATCTTCCCTTCTTTTTTAATACGTCAACAGCAAAAGACGGAGTGTAGATTAATCAACTTTCCTGAGACACCTATTTTTGGCAACTCATTTAAATATGACATTGAAGTGTCGAATAAATCACCGGATGAAGAAGTCAAACTACGACGTCATCATTTAGCCAGATGTATGAAGAATTTTAAGACGGATATCTATTTCGTTTCCACGTTTGAACCGTCAACAAAATCGGTCGATTTGCTCACGGTTGAAACTTTTGCTGGTACGGTATGTGAATATGCTGACATGCCAAAAGAGTGGACAACGACCCGAGGACTT", + "dna_sequence_length": 684, + "id": "CDS_300", + "location": [ + [ + "NC_000913", + 317169, + "-", + 684 + ] + ], + "md5": "ecfb219150d53659872e16bd6f44995f", + "parent_gene": "", + "protein_md5": "bf3a51cbd1c3b31b14b03438b71a474b", + "protein_translation": "VRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGL", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4454" + ], + [ + "gene_synonym", + "EcoGene:EG14443" + ], + [ + "gene_synonym", + "GeneID:5625557" + ], + [ + "gene_synonym", + "b4631" + ], + [ + "gene_synonym", + "ykgQ" + ] + ], + "dna_sequence": "GATTTCTCACTGACAGATAAAGAAATGGCACAAATTAGTTCGCTTGATTTGGGTTATGTTGGGGAGTCGGTAAAACATTTTAATCCTGAATTTGTTCGTGGTTGTCTTGCTGTAAAAATACATGATTGA", + "dna_sequence_length": 129, + "id": "CDS_301", + "location": [ + [ + "NC_000913", + 317439, + "+", + 129 + ] + ], + "md5": "720ec5f5268f2c1ef5133b542ad6d516", + "parent_gene": "", + "protein_md5": "fa9a445cb1c4c81e086d8d02cf89baa0", + "protein_translation": "DFSLTDKEMAQISSLDLGYVGESVKHFNPEFVRGCLAVKIHD", + "protein_translation_length": 42, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001038" + ], + [ + "gene_synonym", + "ECK0301" + ], + [ + "gene_synonym", + "EcoGene:EG13579" + ], + [ + "gene_synonym", + "GI:90111110" + ], + [ + "gene_synonym", + "GeneID:944974" + ], + [ + "gene_synonym", + "JW5038" + ], + [ + "gene_synonym", + "NP_414835.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75685" + ], + [ + "gene_synonym", + "b0301" + ], + [ + "gene_synonym", + "rclC" + ] + ], + "dna_sequence": "ATGGAAAAATACCTGCACCTGTTAAGTCGGGGAGATAAAATTGGCCTGACATTGATTCGTCTGAGTATTGCAATTGTTTTTATGTGGATTGGGTTATTAAAGTTTGTCCCTTACGAGGCAGACAGCATTACACCATTCGTCGCAAACAGTCCACTAATGTCGTTCTTTTATGAACACCCGGAAGACTATAAACAGTATCTGACTCACGAAGGCGAATACAAACCAGAAGCAAGGGCATGGCAAACGGCCAATAATACCTATGGTTTTTCCAACGGTCTTGGCGTCGTGGAGGTGATTATTGCTCTGCTGGTTTTGGCTAATCCTGTCAATCGCTGGTTAGGTTTATTGGGAGGACTGATGGCATTTACCACGCCGCTGGTAACACTCTCATTTTTAATCACCACCCCGGAGGCATGGGTACCCGCATTGGGTGACGCTCATCATGGTTTCCCTTATTTATCCGGTGCTGGTCGCCTGGTATTGAAAGATACTCTGATGCTGGCAGGTGCAGTCATGATAATGGCAGATTCGGCGCGGGAAATTCTTAAACAACGCAGTAATGAATCCAGTTCAACGTTAAAAACTGAATATTGA", + "dna_sequence_length": 594, + "functions": [ + "reactive chlorine species (RCS) stress resistance inner membrane protein" + ], + "id": "CDS_302", + "location": [ + [ + "NC_000913", + 318319, + "-", + 594 + ] + ], + "md5": "e8cc28f0ba07ff50b94a43fbe9c4b531", + "parent_gene": "", + "protein_md5": "7bc26ff03631238942a079fd9a526a14", + "protein_translation": "MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001043" + ], + [ + "gene_synonym", + "ECK0302" + ], + [ + "gene_synonym", + "EcoGene:EG14278" + ], + [ + "gene_synonym", + "GI:90111111" + ], + [ + "gene_synonym", + "GeneID:945658" + ], + [ + "gene_synonym", + "JW5039" + ], + [ + "gene_synonym", + "NP_414837.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75687" + ], + [ + "gene_synonym", + "b0303" + ], + [ + "gene_synonym", + "rclB" + ], + [ + "gene_synonym", + "ykgB" + ], + [ + "gene_synonym", + "ykgI" + ] + ], + "dna_sequence": "ATGTTTAAAAAATCTGTTTTATTTGCAACACTATTATCTGGCGTTATGGCATTTTCCACCAATGCAGATGATAAAATAATTCTGAAACATATCAGCGTCTCGTCAGTATCAGCATCACCGACAGTTCTGGAGGATACCATTGCTGATATAGCCAGAAAATATAATGCTTCATCCTGGAAAGTCACATCGATGCGAATTGATAATAATTCAACCGCAACAGCAGTATTGTATAAATAA", + "dna_sequence_length": 237, + "functions": [ + "reactive chlorine species (RCS) stress resistance periplasmic protein" + ], + "id": "CDS_303", + "location": [ + [ + "NC_000913", + 318567, + "-", + 237 + ] + ], + "md5": "1cf83f069e1e3ebc2d71528aa9320193", + "parent_gene": "", + "protein_md5": "4deb0a840e6405fdfad87f0936a60c19", + "protein_translation": "MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001048" + ], + [ + "gene_synonym", + "ECK0303" + ], + [ + "gene_synonym", + "EcoGene:EG13580" + ], + [ + "gene_synonym", + "GI:90111112" + ], + [ + "gene_synonym", + "GeneID:946092" + ], + [ + "gene_synonym", + "JW5040" + ], + [ + "gene_synonym", + "NP_414838.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77212" + ], + [ + "gene_synonym", + "b0304" + ], + [ + "gene_synonym", + "rclA" + ], + [ + "gene_synonym", + "ykgC" + ] + ], + "dna_sequence": "ATGAATAAATATCAGGCAGTGATTATTGGTTTTGGCAAGGCTGGAAAAACATTAGCCGTCACGCTGGCAAAAGCAGGTTGGCGAGTGGCTCTCATCGAACAATCAAATGCAATGTATGGCGGGACCTGTATTAATATCGGCTGCATCCCAACCAAAACATTGGTTCATGACGCACAGCAGCACACAGATTTTGTCCGTGCCATACAGCGTAAAAATGAAGTGGTTAATTTTTTACGTAATAAGAATTTTCATAATCTTGCGGATATGCCCAATATCGACGTGATCGACGGCCAGGCGGAGTTTATCAATAATCATAGCCTGCGTGTTCATCGGCCTGAGGGAAATCTGGAAATTCATGGCGAGAAAATTTTTATTAATACCGGTGCACAAACCGTGGTTCCGCCAATTCCTGGAATTACCACCACGCCAGGAGTATATGACAGCACCGGATTACTTAATCTAAAAGAATTGCCTGGGCATTTAGGTATTTTGGGCGGCGGATATATTGGCGTTGAGTTCGCCTCTATGTTCGCTAATTTTGGCAGCAAGGTAACCATTTTAGAAGCAGCTTCGCTGTTTTTGCCTCGGGAAGATCGGGATATTGCTGATAATATCGCGACGATTTTACGCGATCAGGGCGTCGATATTATCCTCAATGCCCATGTGGAGCGAATCAGTCACCATGAAAATCAAGTGCAAGTGCATAGCGAGCACGCCCAACTGGCGGTGGATGCACTGTTAATAGCTTCCGGTCGTCAACCGGCTACCGCTTCGTTACATCCAGAAAATGCCGGTATCGCAGTAAACGAGCGCGGGGCAATTGTCGTTGACAAGCGATTACATACCACCGCAGACAATATTTGGGCGATGGGAGATGTTACCGGCGGGCTGCAATTTACTTACATATCACTGGATGATTACCGCATTGTACGTGATGAGTTACTGGGTGAAGGCAAACGTAGTACTGATGATCGGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAGAGAGAGTGGTGCTGATATTCAGGTGGTGACATTGCCTGTAGCTGCAATTCCGCGTGCCAGAGTGATGAATGATACTCGTGGGGTATTAAAAGCGATTGTTGATAATAAAACCCAACGTATGTTAGGGGCATCACTGCTGTGTGTTGACTCCCACGAGATGATCAATATAGTGAAAATGGTGATGGATGCCGGGCTGCCTTATAGCATATTACGCGATCAGATATTTACTCATCCGTCGATGAGCGAATCACTCAATGATCTATTTTCATTAGTCAAATAA", + "dna_sequence_length": 1326, + "functions": [ + "reactive chlorine stress species (RCS) resistance protein", + "pyridine nucleotide-dependent disulfide oxidoreductase family" + ], + "id": "CDS_304", + "location": [ + [ + "NC_000913", + 320001, + "-", + 1326 + ] + ], + "md5": "f8502f2a6176a1f4bbe0c322173331ed", + "parent_gene": "", + "protein_md5": "2458ebb05f095447534c25c58dbdf86c", + "protein_translation": "MNKYQAVIIGFGKAGKTLAVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQHTDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEGNLEIHGEKIFINTGAQTVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQLAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARVMNDTRGVLKAIVDNKTQRMLGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLVK", + "protein_translation_length": 441, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001054" + ], + [ + "gene_synonym", + "ECK0304" + ], + [ + "gene_synonym", + "EcoGene:EG13581" + ], + [ + "gene_synonym", + "GI:16128290" + ], + [ + "gene_synonym", + "GeneID:945616" + ], + [ + "gene_synonym", + "JW0298" + ], + [ + "gene_synonym", + "NP_414839.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77379" + ], + [ + "gene_synonym", + "b0305" + ], + [ + "gene_synonym", + "rclR" + ], + [ + "gene_synonym", + "ykgD" + ] + ], + "dna_sequence": "ATGGATGCCCTTAGCCGTTTGTTGATGCTTAACGCTCCACAAGGAACGATCGATAAGAATTGCGTGTTAGGAAGTGACTGGCAGCTTCCACATGGTGCCGGGGAATTATCGGTTATTCGTTGGCATGCGTTAACGCAAGGAGCGGCGAAGCTGGAAATGCCGACGGGGGAGATTTTTACATTACGCCCGGGAAATGTGGTCCTGCTACCACAAAATTCAGCTCATCGCCTGAGTCATGTCGATAATGAATCGACCTGTATTGTCTGCGGCACTCTTCGGTTGCAACATTCGGCGCGTTATTTTTTAACGTCTTTGCCGGAAACGCTGTTTTTAGCACCGGTTAACCACAGCGTGGAATATAACTGGCTGAGGGAGGCGATCCCGTTTTTACAACAGGAATCCAGATCGGCAATGCCGGGAGTGGATGCACTGTGTAGCCAGATCTGCGCTACATTCTTTACCCTCGCGGTGCGTGAGTGGATTGCACAGGTTAATACTGAGAAAAACATTCTCAGTTTGCTTCTGCATCCACGTCTTGGTGCGGTAATACAGCAAATGCTGGAAATGCCAGGACACGCCTGGACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTATGCCAGTGAATCATCTTTTCACAAGGCGTTTGTCCGCGAGTTTGGTTGTACCCCGGGAGAATATCGGGAAAGGGTCAGACAGCTTGCACCCTGA", + "dna_sequence_length": 855, + "functions": [ + "reactive chlorine species (RCS)-specific activator of the rcl genes" + ], + "id": "CDS_305", + "location": [ + [ + "NC_000913", + 320227, + "+", + 855 + ] + ], + "md5": "781d70f06a344596b541c3f60acc3234", + "parent_gene": "", + "protein_md5": "685e6d0e68bdc2b72dd55f5c1470257c", + "protein_translation": "MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001058" + ], + [ + "gene_synonym", + "ECK0305" + ], + [ + "gene_synonym", + "EcoGene:EG13582" + ], + [ + "gene_synonym", + "GI:16128291" + ], + [ + "gene_synonym", + "GeneID:948438" + ], + [ + "gene_synonym", + "JW5041" + ], + [ + "gene_synonym", + "NP_414840.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77252" + ], + [ + "gene_synonym", + "b0306" + ], + [ + "gene_synonym", + "ykgE" + ] + ], + "dna_sequence": "GTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTCGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTACCCGACGTATCTGGCGGATGAACCTGAATGGGCATCACGTGCCGCAAAGGTTGCCGCGCGTATGCAGGATCTCACCTCTTTTATTGTTAATAAATTAGGGGTAGTCGATGTAGGTGCCAGTTTGCAAGGGAGAGCGGTGTATCACCCATCTTGTAGCCTGGCCCGTAAGCTGGGAGTGAAGGACGAGCCACTTACGCTGCTGAAAAATGTGCGTGGACTGGAGCTGTTGACCTTTGCTGAACAGGATACCTGCTGCGGATTTGGCGGCACGTTCTCGGTCAAAATGGCCGAAATATCCGGCGAGATGGTGAAAGAAAAGGTTGCGCACCTGATGGAAGTCCGCCCTGAGTATTTAATTGGTGCTGACGTGAGTTGCCTGCTAAACATCAGTGGGCGATTACAACGGGAAGGGCAGAAAGTCAAAGTGATGCATATTGCTGAAGTGTTGATGAGCCGCTGA", + "dna_sequence_length": 720, + "functions": [ + "cysteine-rich LutA family protein", + "putative electron transport chain YkgEFG component" + ], + "id": "CDS_306", + "location": [ + [ + "NC_000913", + 321608, + "+", + 720 + ] + ], + "md5": "e2587411f09033187c14c2c45c04933c", + "parent_gene": "", + "protein_md5": "4f40db343d8fe1a2490bc5670cc1295e", + "protein_translation": "MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAAKVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001060" + ], + [ + "gene_synonym", + "ECK0306" + ], + [ + "gene_synonym", + "EcoGene:EG13583" + ], + [ + "gene_synonym", + "GI:16128292" + ], + [ + "gene_synonym", + "GeneID:944980" + ], + [ + "gene_synonym", + "JW0300" + ], + [ + "gene_synonym", + "NP_414841.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77536" + ], + [ + "gene_synonym", + "b0307" + ], + [ + "gene_synonym", + "ykgF" + ] + ], + "dna_sequence": "ATGTCGATCAAAACCAGTAATACAGATTTTAAGACACGCATCCGTCAGCAAATTGAAGATCCGATCATGCGCAAAGCGGTGGCAAACGCGCAGCAGCGTATTGGGGCAAATCGGCAAAAAATGGTCGATGAATTGGGGCACTGGGAGGAGTGGCGCGATCGGGCCGCCCAGATACGTGATCATGTTCTGAGTAATCTCGACGCTTATCTGTACCAGCTCTCAGAAAAAGTGACGCAAAACGGCGGTCACGTCTATTTTGCAAGAACCAAAGAAGACGCTACCCGCTACATTTTACAGGTTGCCCAACGCAAAAATGCCCGGAAGGTGGTGAAATCTAAATCGATGGTGACCGAAGAGATTGGTGTCAATCATGTGTTGCAGGATGCTGGCATTCAGGTGATTGAAACCGATCTGGGTGAATATATTCTCCAGCTGGATCAAGATCCGCCATCTCATGTTGTGGTCCCGGCAATTCATAAAGATCGCCATCAGATCCGTCGAGTGCTACACGAACGTCTGGGCTATGAGGGGCCGGAAACGCCTGAAGCGATGACCTTATTCATCCGGCAAAAAATCCGCGAAGATTTCCTCAGTGCTGAAATAGGTATTACCGGCTGTAATTTCGCGGTGGCAGAGACCGGTTCGGTATGCCTGGTGACCAATGAAGGTAATGCGCGAATGTGTACCACGCTGCCTAAAACGCATATTGCAGTGATGGGAATGGAGCGTATTGCCCCCACGTTTGCCGAGGTAGATGTATTGATCACCATGCTGGCGCGCAGTGCCGTTGGTGCACGTTTGACGGGATACAACACCTGGCTGACAGGACCGCGCGAAGCTGGGCACGTTGATGGTCCTGAAGAGTTTCATCTGGTTATTGTCGATAACGGGCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTCATCGTCGGGTGATGGCTGAAAAAGGGATCACCGCAAAAGCAGAGCAACGGGCGATAAAAATGTTCGCTTATGCCAATAGTCATCCAGGATTGTGGAAAGTCGGGATGATGGCCGGTGCTCATGCGGCAAGCTGGTTTATCAATGGCGGCAAAACACCACTCAAATTTGGCGCGATTAGCGACTGGATGGAAGCACGCGATCTTCCTGAAGCTGACGGAGAGAGTTTCCGTAGTTGGTTTAAGAAACATCAGGCGCAGGAGAAAAAGAATGGATAA", + "dna_sequence_length": 1428, + "functions": [ + "ferridoxin-like LutB family protein", + "putative electron transport chain YkgEFG component" + ], + "id": "CDS_307", + "location": [ + [ + "NC_000913", + 322338, + "+", + 1428 + ] + ], + "md5": "c9b8c21866391c3d01994228ffe77190", + "parent_gene": "", + "protein_md5": "67ec7930c2d984a92d1d51dfc63193d3", + "protein_translation": "MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDELGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVYFARTKEDATRYILQVAQRKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEARDLPEADGESFRSWFKKHQAQEKKNG", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001062" + ], + [ + "gene_synonym", + "ECK0307" + ], + [ + "gene_synonym", + "EcoGene:EG13584" + ], + [ + "gene_synonym", + "GI:90111113" + ], + [ + "gene_synonym", + "GeneID:945906" + ], + [ + "gene_synonym", + "JW5042" + ], + [ + "gene_synonym", + "NP_414842.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77433" + ], + [ + "gene_synonym", + "b0308" + ], + [ + "gene_synonym", + "ykgG" + ] + ], + "dna_sequence": "ATGGATAATCGAGGCGAATTTTTGAATAACGTTGCTCAGGCACTGGGTCGCCCGCTGCGACTTGAACCGCAAGCAGAAGATGCGCCGCTTAACAACTATGCTAACGAGCGGCTTACCCAACTTAACCAACAGCAGCGCTGTGACGCGTTTATTCAGTTTGCCAGCGATGTTATGTTGACGCGCTGTGAGCTGACCAGCGAGGCGAAGGCGGCAGAAGCTGCAATACGTCTGTGTAAAGAGCTGGGAGATCAGTCGGTCGTGATTAGCGGTGACACGAGGCTGGAGGAATTGGGGATTAGCGAACGTTTGCAGCAGGAATGCAATGCCGTTGTTTGGGATCCGGCGAAAGGTGCCGAGAATATCTCGCAGGCAGAGCAGGCTAAAGTGGGTGTTGTGTATGCTGAATATGGTTTAACCGAATCGGGAGGCGTGGTTCTTTTTTCCGCCGCCGAGCGCGGGCGTTCATTGAGCCTGCTCCCGGAATATTCTCTTTTTATCCTGCGTAAAAGCACTATCCTGCCGCGTGTAGCGCAACTCGCAGAAAAATTGCATCAGAAAGCGCAGGCCGGTGAACGAATGCCTTCCTGCATTAACATCATTAGCGGCCCCAGTTCAACGGCGGATATTGAGCTTATCAAAGTCGTCGGAGTTCATGGCCCGGTGAAAGCGGTGTATCTGATTATTGAGGATTGTTGA", + "dna_sequence_length": 696, + "functions": [ + "LutC family protein", + "putative electron transport chain YkgEFG component" + ], + "id": "CDS_308", + "location": [ + [ + "NC_000913", + 323758, + "+", + 696 + ] + ], + "md5": "bef003ca37aeff76492033a69eaa403c", + "parent_gene": "", + "protein_md5": "5606b0ad845085d2901679303e1134de", + "protein_translation": "MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001066" + ], + [ + "gene_synonym", + "ECK0308" + ], + [ + "gene_synonym", + "EcoGene:EG13585" + ], + [ + "gene_synonym", + "GI:16128295" + ], + [ + "gene_synonym", + "GeneID:947513" + ], + [ + "gene_synonym", + "JW0302" + ], + [ + "gene_synonym", + "NP_414844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77180" + ], + [ + "gene_synonym", + "b0310" + ], + [ + "gene_synonym", + "ykgH" + ] + ], + "dna_sequence": "ATGCGTGAACAAATCAAACAGGATATCGATCTGATTGAGATTTTATTTTATCTGAAGAAAAAGATTCGTGTTATCCTTTTTATTATGGCTATATGTATGGCTATGGTGCTGTTGTTTCTGTATATCAATAAAGACAATATAAAAGTGATTTACAGCCTAAAAATAAACCAGACAACGCCAGGTATACTTGTTAGCTGTGATAGCAATAATAATTTTGCCTGTCAGACTACAATGACTGAAGATGTTATTCAGCGAATTACTACATTTTTTCACACCAGCCCAGATGTCAAGAACAGAGAAATAAGGCTGGAATGGTCAGGAGATAAGAGAGCTTTACCAACTGCTGAAGAGGAAATATCTCGCGTGCAGGCCTCTATTATCAAATGGTATGCGTCAGAATATCATAATGGCAGGCAAGTTCTCGATGAGATACAAACGCCTTCAGCAATTAACAGTGAGCTTTATACAAAAATGATATACCTGACCAGGAACTGGTCATTGTATCCGAACGGTGATGGCTGTGTAACTATAAGCTCACCAGAAATAAAAAATAAATACCCTGCTGCCATTTGCCTGGCTCTGGGATTTTTTCTAAGCATTGTAATTTCTGTAATGTTTTGCCTTGTCAAAAAAATGGTAGATGAATACCAACAAAACTCTGGGCAGTAA", + "dna_sequence_length": 669, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_309", + "location": [ + [ + "NC_000913", + 325364, + "-", + 669 + ] + ], + "md5": "cff94e265b4d6f64d2a19fab581d9494", + "parent_gene": "", + "protein_md5": "bf13e8e1e6a015643c8cea1ea7d10c19", + "protein_translation": "MREQIKQDIDLIEILFYLKKKIRVILFIMAICMAMVLLFLYINKDNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTEDVIQRITTFFHTSPDVKNREIRLEWSGDKRALPTAEEEISRVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIYLTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQNSGQ", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001070" + ], + [ + "gene_synonym", + "ECK0309" + ], + [ + "gene_synonym", + "EcoGene:EG10109" + ], + [ + "gene_synonym", + "GI:16128296" + ], + [ + "gene_synonym", + "GeneID:945716" + ], + [ + "gene_synonym", + "JW0303" + ], + [ + "gene_synonym", + "NP_414845.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17444" + ], + [ + "gene_synonym", + "b0311" + ], + [ + "gene_synonym", + "betA" + ] + ], + "dna_sequence": "TTGCAATTTGACTACATCATTATTGGTGCCGGCTCAGCCGGCAACGTTCTCGCTACCCGTCTGACTGAAGATCCGAATACCTCCGTGCTGCTGCTTGAAGCGGGCGGCCCGGACTATCGCTTTGACTTCCGCACCCAGATGCCCGCTGCCCTGGCATTCCCGCTACAGGGTAAACGCTACAACTGGGCCTATGAAACGGAACCTGAACCGTTTATGAATAACCGCCGCATGGAGTGCGGACGCGGTAAAGGTCTGGGTGGATCGTCGCTGATCAACGGCATGTGCTACATCCGTGGCAATGCGCTGGATCTCGATAACTGGGCGCAAGAACCCGGTCTGGAGAACTGGAGCTACCTCGACTGCCTGCCCTACTACCGCAAGGCCGAGACTCGCGATATGGGTGAAAACGACTATCACGGCGGTGATGGCCCGGTGAGCGTCACTACCTCCAAACCCGGCGTCAATCCGCTGTTTGAAGCGATGATTGAAGCGGGCGTGCAGGCGGGCTACCCGCGCACGGACGATCTCAACGGTTATCAGCAGGAAGGTTTTGGTCCGATGGATCGCACCGTCACGCCGCAGGGCCGTCGCGCCAGCACCGCGCGTGGCTATCTCGATCAGGCCAAATCGCGTCCTAACCTGACCATTCGTACTCACGCTATGACCGATCACATCATTTTTGACGGCAAACGCGCGGTGGGCGTCGAATGGCTGGAAGGCGACAGCACCATCCCAACCCGCGCAACGGCCAACAAAGAAGTGCTGTTATGTGCAGGCGCGATTGCCTCACCGCAGATCCTGCAACGCTCCGGCGTCGGCAACGCTGAACTGCTGGCGGAGTTTGATATTCCGCTGGTGCATGAATTACCCGGCGTCGGCGAAAATCTTCAGGATCATCTGGAGATGTATCTGCAATATGAGTGCAAAGAACCGGTTTCCCTCTACCCTGCCCTGCAGTGGTGGAACCAGCCGAAAATCGGTGCGGAGTGGCTGTTTGGCGGCACTGGCGTTGGTGCCAGCAACCACTTTGAAGCAGGTGGATTTATTCGCAGCCGTGAGGAATTTGCGTGGCCGAATATTCAGTACCATTTCCTGCCAGTAGCGATTAACTATAACGGCTCGAATGCAGTGAAAGAGCACGGTTTCCAGTGCCACGTCGGCTCAATGCGCTCGCCAAGCCGTGGGCATGTGCGGATTAAATCCCGCGACCCGCACCAGCATCCGGCGATTCTGTTTAACTACATGTCGCACGAGCAGGACTGGCAGGAGTTCCGCGACGCAATTCGCATCACCCGCGAGATCATGCATCAACCCGCGCTGGATCAGTATCGTGGCCGCGAAATCAGCCCCGGTGTCGAATGCCAGACGGATGAACAGCTCGATGAGTTCGTGCGTAACCACGCCGAAACCGCCTTCCATCCGTGCGGTACCTGCAAAATGGGTTACGACGAGATGTCCGTGGTTGACGGCGAAGGCCGCGTACACGGGTTAGAAGGCCTGCGTGTGGTGGATGCGTCGATTATGCCGCAGATTATCACCGGGAATTTGAACGCCACGACAATTATGATTGGCGAGAAAATAGCGGATATGATTCGTGGACAGGAAGCGCTGCCGAGGAGCACGGCGGGATATTTTGTGGCAAATGGGATGCCGGTGAGAGCGAAAAAATGA", + "dna_sequence_length": 1671, + "functions": [ + "choline dehydrogenase, a flavoprotein" + ], + "id": "CDS_310", + "location": [ + [ + "NC_000913", + 327247, + "-", + 1671 + ] + ], + "md5": "843503e21e428ba1b761b6da2aeaed65", + "parent_gene": "", + "protein_md5": "fb2f59b05969a7019fd6a5a1a6247a2d", + "protein_translation": "MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRSTAGYFVANGMPVRAKK", + "protein_translation_length": 556, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001072" + ], + [ + "gene_synonym", + "ECK0310" + ], + [ + "gene_synonym", + "EcoGene:EG10110" + ], + [ + "gene_synonym", + "GI:16128297" + ], + [ + "gene_synonym", + "GeneID:947376" + ], + [ + "gene_synonym", + "JW0304" + ], + [ + "gene_synonym", + "NP_414846.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17445" + ], + [ + "gene_synonym", + "b0312" + ], + [ + "gene_synonym", + "betB" + ] + ], + "dna_sequence": "ATGTCCCGAATGGCAGAACAGCAGCTTTATATACATGGTGGTTATACCTCCGCCACCAGCGGTCGCACCTTCGAGACCATTAACCCGGCCAACGGTAACGTGCTGGCGACCGTGCAGGCCGCCGGGCGCGAGGATGTCGATCGCGCCGTGAAAAGCGCCCAGCAGGGGCAAAAAATCTGGGCGTCGATGACCGCCATGGAGCGCTCGCGTATTCTGCGTCGGGCCGTTGATATTCTGCGTGAACGCAATGACGAACTCGCAAAACTGGAAACCCTCGACACCGGAAAAGCATATTCGGAAACCTCAACCGTCGATATCGTTACCGGTGCGGACGTGCTGGAGTACTACGCCGGGCTGATCCCGGCGCTGGAAGGCAGCCAGATCCCGTTGCGTGAAACGTCCTTTGTGTATACCCGCCGCGAACCGCTGGGCGTAGTGGCAGGGATTGGCGCATGGAACTACCCGATCCAGATTGCCCTGTGGAAATCCGCCCCGGCGCTGGCGGCAGGCAACGCAATGATTTTCAAACCGAGCGAAGTTACCCCGCTTACCGCGTTAAAGCTGGCTGAAATTTACAGCGAAGCGGGCCTGCCGGACGGCGTATTTAACGTGTTGCCGGGCGTGGGCGCGGAGACCGGGCAATATCTGACCGAGCATCCGGGCATTGCCAAAGTGTCATTTACCGGCGGTGTCGCCAGCGGCAAAAAAGTGATGGCTAACTCGGCGGCCTCTTCCCTGAAAGAAGTGACCATGGAACTGGGCGGTAAATCACCGCTGATCGTTTTCGATGATGCGGATCTCGATCTCGCCGCCGATATCGCCATGATGGCAAACTTCTTCAGCTCCGGTCAGGTGTGTACCAATGGCACCCGCGTCTTCGTTCCGGCGAAATGCAAAGCCGCATTTGAGCAGAAAATTCTGGCGCGCGTTGAGCGCATTCGCGCGGGCGACGTTTTCGATCCGCAAACTAACTTCGGCCCGCTGGTCAGCTTCCCGCATCGCGATAACGTGCTGCGCTATATCGCCAAAGGCAAAGAGGAAGGCGCGCGCGTACTGTGCGGCGGCGATGTACTGAAAGGCGATGGCTTCGATAACGGCGCATGGGTTGCACCGACAGTGTTCACCGATTGCAGCGACGATATGACCATCGTGCGTGAAGAGATCTTCGGGCCAGTGATGTCCATTCTGACCTACGAGTCGGAAGACGAAGTCATTCGCCGCGCTAACGATACCGACTACGGCCTGGCGGCGGGCATCGTGACAGCGGACCTGAACCGCGCGCATCGCGTCATTCATCAGCTGGAAGCGGGTATTTGCTGGATCAACACCTGGGGCGAATCCCCGGCAGAGATGCCCGTTGGCGGCTACAAACACTCCGGCATTGGTCGCGAGAACGGCGTGATGACGCTCCAGAGTTACACCCAGGTGAAGTCCATCCAGGTTGAGATGGCTAAATTCCAGTCCATATTCTAA", + "dna_sequence_length": 1473, + "functions": [ + "betaine aldehyde dehydrogenase, NAD-dependent" + ], + "id": "CDS_311", + "location": [ + [ + "NC_000913", + 328733, + "-", + 1473 + ] + ], + "md5": "32f337c1f9e16c15bb28b44f3937ea1f", + "parent_gene": "", + "protein_md5": "49fcbbfa7b0d959af14afbe967b8c19b", + "protein_translation": "MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF", + "protein_translation_length": 490, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001076" + ], + [ + "gene_synonym", + "ECK0311" + ], + [ + "gene_synonym", + "EcoGene:EG10111" + ], + [ + "gene_synonym", + "GI:49176011" + ], + [ + "gene_synonym", + "GeneID:944981" + ], + [ + "gene_synonym", + "JW0305" + ], + [ + "gene_synonym", + "NP_414847.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17446" + ], + [ + "gene_synonym", + "b0313" + ], + [ + "gene_synonym", + "betI" + ] + ], + "dna_sequence": "ATGCCCAAATTGGGGATGCAGTCGATCCGGCGCAGACAACTGATCGACGCCACACTGGAAGCAATAAATGAAGTGGGCATGCACGATGCAACGATCGCGCAGATCGCCCGCCGTGCAGGCGTTTCTACGGGGATCATCAGCCACTATTTCAGGGACAAAAATGGTCTGCTGGAAGCAACCATGCGCGATATCACCAGTCAGCTGCGTGACGCGGTTTTGAATCGATTACATGCACTTCCGCAGGGCAGTGCAGAGCAGCGATTACAGGCGATTGTTGGCGGAAACTTCGATGAAACGCAGGTGAGCAGTGCGGCGATGAAAGCCTGGCTGGCGTTCTGGGCCAGCAGTATGCATCAGCCGATGCTCTATCGTTTACAGCAGGTCAGCAGCCGCCGCTTGCTGTCGAATCTGGTGAGCGAGTTTCGTCGCGAATTGCCGCGCGAACAGGCACAGGAAGCGGGCTACGGCCTGGCCGCGCTGATTGATGGATTATGGCTGCGCGCGGCTCTGAGCGGCAAACCGCTGGATAAAACCCGCGCTAATTCCCTGACCCGCCACTTTATCACTCAGCATCTACCCACCGATTAA", + "dna_sequence_length": 588, + "functions": [ + "choline-inducible betIBA-betT divergent operon transcriptional repressor" + ], + "id": "CDS_312", + "location": [ + [ + "NC_000913", + 329334, + "-", + 588 + ] + ], + "md5": "a7da5078e70fbb0ccfc639f62918b884", + "parent_gene": "", + "protein_md5": "2115970d6fc6e17c960a5dd6f7042705", + "protein_translation": "MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001080" + ], + [ + "gene_synonym", + "ECK0312" + ], + [ + "gene_synonym", + "EcoGene:EG10112" + ], + [ + "gene_synonym", + "GI:16128299" + ], + [ + "gene_synonym", + "GeneID:945079" + ], + [ + "gene_synonym", + "JW0306" + ], + [ + "gene_synonym", + "NP_414848.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABC9" + ], + [ + "gene_synonym", + "b0314" + ], + [ + "gene_synonym", + "betT" + ] + ], + "dna_sequence": "ATGACAGACCTTTCACACAGCAGGGAAAAGGACAAAATCAATCCGGTGGTGTTTTACACCTCCGCCGGACTGATTTTGTTGTTTTCCCTGACAACGATCCTGTTTCGCGACTTCTCGGCCCTGTGGATTGGCCGCACGCTGGACTGGGTTTCTAAAACCTTCGGTTGGTACTATCTGCTGGCGGCAACGCTCTATATTGTCTTTGTGGTCTGTATCGCTTGTTCGCGTTTTGGTTCGGTGAAGCTCGGGCCAGAACAATCCAAACCGGAATTCAGCCTGCTGAGTTGGGCGGCGATGCTGTTTGCTGCCGGGATCGGTATCGACCTGATGTTCTTCTCCGTAGCCGAACCGGTAACGCAGTATATGCAGCCGCCGGAAGGCGCGGGACAGACGATTGAGGCCGCGCGTCAGGCGATGGTCTGGACGCTGTTTCACTACGGCTTAACCGGCTGGTCGATGTATGCGCTGATGGGCATGGCGCTCGGATACTTTAGCTATCGTTATAATTTGCCGCTCACCATCCGCTCGGCGCTGTACCCGATCTTCGGTAAACGGATTAACGGGCCGATAGGTCACTCAGTGGATATTGCAGCGGTGATCGGCACTATCTTCGGTATTGCCACTACGCTCGGTATCGGTGTGGTGCAGCTTAACTATGGCTTGAGCGTACTGTTTGATATTCCCGATTCGATGGCGGCGAAAGCGGCACTGATCGCCTTGTCGGTGATAATCGCCACGATCTCTGTCACCTCCGGTGTCGATAAGGGCATTCGCGTGTTATCGGAGCTTAATGTCGCGCTGGCGCTGGGATTGATCCTGTTCGTATTGTTTATGGGCGACACTTCGTTCCTGCTTAATGCACTGGTGCTGAATGTTGGCGACTATGTGAATCGCTTTATGGGCATGACGCTCAACAGTTTTGCCTTCGACCGTCCGGTTGAGTGGATGAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGTTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGGCGCAGTATCCGGCGTTTACCTTTAGCGCCTCCGTCGCCACCATTACTGGCCTGCTGTTTTATGTGACCTCGGCGGACTCCGGGGCGCTGGTGCTGGGGAATTTCACCTCGCAGCTTAAAGATATCAACAGCGACGCCCCCGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAATCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTAAACAGATGATGGAGACGGTCTGTTACCCGGCAATGGAAGAAGTGGCGCAGGAGTTGCGGTTGCGCGGCGCGTACGTGGAGCTAAAAAGCCTGCCACCGGAAGAGGGACAGCAGTTGGGTCATCTGGATTTGTTGGTGCATATGGGCGAAGAGCAAAACTTTGTCTATCAGATTTGGCCGCAGCAATATTCGGTGCCGGGCTTTACCTACCGCGCACGCAGCGGTAAATCGACCTACTACCGGCTGGAAACCTTCCTGTTAGAAGGCAGCCAGGGCAACGACCTGATGGACTACAGCAAAGAGCAGGTGATCACCGATATTCTTGACCAGTACGAGCGGCACCTTAACTTTATTCATCTCCATCGTGAAGCGCCGGGCCATAGCGTGATGTTCCCGGACGCGTGA", + "dna_sequence_length": 2034, + "functions": [ + "choline transporter of high affinity" + ], + "id": "CDS_313", + "location": [ + [ + "NC_000913", + 329463, + "+", + 2034 + ] + ], + "md5": "961a85da88e3c3189ff005d4c394164c", + "parent_gene": "", + "protein_md5": "68a7b6ffd74481e53076568ba8c61d1f", + "protein_translation": "MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA", + "protein_translation_length": 677, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001086" + ], + [ + "gene_synonym", + "ECK0313" + ], + [ + "gene_synonym", + "EcoGene:EG11236" + ], + [ + "gene_synonym", + "GI:16128300" + ], + [ + "gene_synonym", + "GeneID:947459" + ], + [ + "gene_synonym", + "JW0307" + ], + [ + "gene_synonym", + "NP_414849.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21514" + ], + [ + "gene_synonym", + "b0315" + ], + [ + "gene_synonym", + "yahA" + ] + ], + "dna_sequence": "ATGAATTCATGTGATTTTCGTGTTTTTCTGCAAGAGTTCGGTACAACGGTTCATTTGTCATTGCCTGGTAGCGTATCCGAGAAAGAACGACTGCTACTCAAGCTGCTGATGCAGGGAATGTCTGTAACAGAAATATCACAGTACAGAAATCGCAGTGCAAAGACAATTTCACATCAAAAGAAACAGCTCTTTGAGAAACTGGGGATTCAGAGCGATATTACTTTCTGGCGCGATATTTTCTTTCAGTACAATCCGGAGATCATATCCGCCACGGGGAGTAATAGTCACAGATATATTAATGATAATCACTATCACCATATCGTCACGCCTGAAGCCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAATGACCCGCCAACTGATGAAACAGACTGCGGATATTCTGATGCCGGTAAAACATTTGCTGCCGGACAATTTCCATATTGGCATCAACGTCTCGGCGGGTTGTTTTTTGGCAGCGGGATTTGAAAAAGAGTGTCTGAACCTGGTTAATAAATTAGGTAACGATAAAATCAAGCTGGTTCTCGAGCTAACGGAACGTAACCCTATTCCGGTAACGCCAGAAGCCAGAGCGATATTTGACAGCCTTCATCAGCACAACATTACCTTTGCGCTGGATGACTTTGGTACGGGTTATGCGACCTATCGTTACTTGCAGGCGTTCCCGGTCGATTTTATTAAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTTGTACTCTCCGCCAGTACCGGGTAATAAATTTATCTCTGAATGGGTAATGAAAGCAGGTGGTTGA", + "dna_sequence_length": 1089, + "functions": [ + "c-di-GMP-specific phosphodiesterase" + ], + "id": "CDS_314", + "location": [ + [ + "NC_000913", + 332371, + "+", + 1089 + ] + ], + "md5": "d1a9c734159ecdaaa9816f090eaa804f", + "parent_gene": "", + "protein_md5": "411b4fa05115770d246cb0fb02e54bd0", + "protein_translation": "MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001088" + ], + [ + "gene_synonym", + "ECK0314" + ], + [ + "gene_synonym", + "EcoGene:EG13586" + ], + [ + "gene_synonym", + "GI:16128301" + ], + [ + "gene_synonym", + "GeneID:945278" + ], + [ + "gene_synonym", + "JW0308" + ], + [ + "gene_synonym", + "NP_414850.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77700" + ], + [ + "gene_synonym", + "b0316" + ], + [ + "gene_synonym", + "yahB" + ] + ], + "dna_sequence": "ATGAACTCAATTTTTACCGAAGAGAATCTGTTGGCATTTACTACCGCTGCGCGTTTTGGCAGCTTCAGTAAAGCCGCAGAAGAGTTGGGTTTAACCACTTCCGCCATTAGCTACACCATTAAGCGTATGGAGACGGGGCTGGATGTGGTGCTGTTCACTCGCAGTACCCGCAGCATTGAGTTAACGGAGTCCGGGCGTTATTTTTTCCGCAAAGCTACCGACCTGCTGAATGATTTTTATGCCATCAAACGCAGAATCGATACTATTTCGCAGGGCATAGAAGCGCGTGTGCGCATTTGTATTAATCAGCTGCTTTATACGCCCAAACACACCGCACGCTTGTTACAGGTGCTGAAAAAGCAGTTTCCTACCTGCCAGATTACCGTCACCACCGAAGTGTATAACGGCGTCTGGGATGCGATTATTAATAATCAGGCCAATATCGCCATCGGCGCACCCGATACACTACTGGACGGCGGCGGTATTGATTACACTGAAATTGGCGCGATTCGCTGGGCTTTTGCTATCGCCCCGGATCACCCGTTAGCCTTTGTGCCGGAACCCATCGCCGAAAGCCAACTGCGTCTCTACCCTAATATTATGGTGGAGGACACCGCGCATACGATTAATAAAAAAGTGGGCTGGTTGCTGCACGGGCAGGAGTCAATTCTGGTGCCAGATTTCAACACCAAATGTCAGTGCCAGATTTTAGGTGAAGGAATTGGTTTTTTGCCGGATTACATGGTCCGTGAGGCGATGACGCAATCCCTGCTGGTTACCCGACAAATCCATAATCCGCGCCAGGATTCGCGCATGTTACTGGCGACTCAGCATTCTGCTACGGGTCAGGTGACGCAGTGGATTAAAAAACAATTTGCGCCAAATGGCATATTAACGGGGATCTATCAGGATTTACTGCATCGGGAGAATTAA", + "dna_sequence_length": 933, + "functions": [ + "putative DNA-bindng transcriptional regulator" + ], + "id": "CDS_315", + "location": [ + [ + "NC_000913", + 334433, + "-", + 933 + ] + ], + "md5": "75c33bf75d1471ecd15936b535931964", + "parent_gene": "", + "protein_md5": "bf3a36c82504415bbb000c2636d22a7e", + "protein_translation": "MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001091" + ], + [ + "gene_synonym", + "ECK0315" + ], + [ + "gene_synonym", + "EcoGene:EG13587" + ], + [ + "gene_synonym", + "GI:16128302" + ], + [ + "gene_synonym", + "GeneID:947337" + ], + [ + "gene_synonym", + "JW0309" + ], + [ + "gene_synonym", + "NP_414851.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77219" + ], + [ + "gene_synonym", + "b0317" + ], + [ + "gene_synonym", + "yahC" + ] + ], + "dna_sequence": "ATGAACGGACTCACGGCAACGGGTGTCACCGTCGGTATTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTCGGGCTCTCTCAAGGATGGGAATTATTAGGAACCATTGGCTTCGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGGGGTTTATCAGAAGTCTGGCGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGACTGCTGGTTGGCTGGCCTCTGTAAGTGGACTGTCCGCGTTCTGGGCGAGCGTAATTACTACCGTACCCTTCTCGGCGGTAGTGGTCTGGCAAGGGCGTTTCTGGTTACTGTCCTTTATTCCCGGTGGCTTTCTCGGCATGACGCTGTTTTTTGCCAGCGGGATGAACTGGACGGTGACGTTACTGGGTTTTCTGGCGGGTAACTGCGTGGGGGTAATTTCAGAATATGGTGGACAAAAATTAAGCGAAGCGACGACTAAACGCGACGGGTATTAA", + "dna_sequence_length": 498, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_316", + "location": [ + [ + "NC_000913", + 335022, + "-", + 498 + ] + ], + "md5": "89f6469dc519e91a5050a281c000a745", + "parent_gene": "", + "protein_md5": "0235befc034c930aa28b7f4ceca7b4c8", + "protein_translation": "MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATTKRDGY", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001095" + ], + [ + "gene_synonym", + "ECK0316" + ], + [ + "gene_synonym", + "EcoGene:EG13588" + ], + [ + "gene_synonym", + "GI:16128303" + ], + [ + "gene_synonym", + "GeneID:947681" + ], + [ + "gene_synonym", + "JW0310" + ], + [ + "gene_synonym", + "NP_414852.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77736" + ], + [ + "gene_synonym", + "b0318" + ], + [ + "gene_synonym", + "yahD" + ] + ], + "dna_sequence": "ATGAGTATAAAAAATCTACCTGCCGACTATTTATTGGCTGCACAACAGGGTGATATCGATAAAGTAAAAACCTGCCTTGCGCTGGGTGTCGATATTAATACCTGCGATCGTCAGGGGAAAACGGCAATTACGCTGGCAAGTTTATATCAGCAATATGCTTGCGTTCAGGCATTAATTGATGCCGGAGCGGATATTAATAAGCAAGATCATACCTGTTTAAATCCTTTTTTAATTAGCTGTCTGAACGATGATTTAACGCTACTACGAATTATTTTACCGGCTAAACCCGATCTTAATTGCGTAACCCGTTTTGGCGGTGTCGGCCTGACGCCTGCCTGTGAAAAAGGCCATTTAAGTATTGTAAAAGAGCTTTTGGCGCATACGGAGATTAACGTTAACCAGACCAACCATGTAGGCTGGACGCCGCTACTGGAAGCGATTGTGCTTAATGATGGTGGTATTAAACAGCAGGCGATTGTGCAGTTATTGCTGGAACACGGTGCCAGCCCGCATCTGACCGATAAATATGGCAAAACGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGTTACTGATTGCCGCAGGTGCATAA", + "dna_sequence_length": 606, + "functions": [ + "ankyrin repeat protein" + ], + "id": "CDS_317", + "location": [ + [ + "NC_000913", + 335280, + "+", + 606 + ] + ], + "md5": "062b49b8249024fd362dfbab490ce332", + "parent_gene": "", + "protein_md5": "69b4759cf5429d6ae98c42bf3b4dafa3", + "protein_translation": "MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001097" + ], + [ + "gene_synonym", + "ECK0317" + ], + [ + "gene_synonym", + "EcoGene:EG13589" + ], + [ + "gene_synonym", + "GI:16128304" + ], + [ + "gene_synonym", + "GeneID:947134" + ], + [ + "gene_synonym", + "JW0311" + ], + [ + "gene_synonym", + "NP_414853.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77297" + ], + [ + "gene_synonym", + "b0319" + ], + [ + "gene_synonym", + "yahE" + ] + ], + "dna_sequence": "GTGTGGGCGCTAACTGCGGATGCGGATTTTCTGGCGCAGCGGGGGCAAGGACAGGTTGAACAGGTCTTTGCCAGAGCGGTAAATATCGCACTCCCGGCTCGCCAGCAGTTGCTGACGCTGCTTTGTGAAGAGTACGACAATGCGCCAAACAGTTGTCGGTTGGCACTCACTCACTTTGATGATCTGTTCCGGCATGGTGATAAGGTTCAGTTTGACGATCAAGGTATTACGGTTGGTCAACATCTTCATATAGAGATGAGTCGTTGTCGGCGTTGGCTGTCCCCAACCTTGCAAATGACCGCTGTGAATTTTCACCTTATCGCCTGGCTACAGTGGCACGACATTATTCATCAGCACCTGGGGGAAAATGAAACCCTGTTTAATTATCGCGGCGATAATCCGTTTTATCAGGCGTTAAATAAAGAATTACATATTAAACGACGGGCAGTTATTCAGGCCGTAAACGATAAACAAAATATCGCCTCAGCGGTCGCCAGTATGATGGGGTTAGGGATTGGCCTTACGCCATCAGCCGACGATTATTTAACAGGTCTGGCGCTTATTTTATTTATTCCCGGGCATCCGGCGGAAAAATACAAAGAGGAATTTTATCTCGGTCTGCAACGCGGCAAAAATAATACCACATTATTAAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACATCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATGGTTGTGCGCTGAGCCAAACCTACGGAGGGAATTATGTCAGTTAA", + "dna_sequence_length": 864, + "functions": [ + "DUF2877 family protein" + ], + "id": "CDS_318", + "location": [ + [ + "NC_000913", + 335925, + "+", + 864 + ] + ], + "md5": "b81f9b5cc9eb30198abcd76c47378375", + "parent_gene": "", + "protein_md5": "6f147c448593702425030acd785b2774", + "protein_translation": "MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001099" + ], + [ + "gene_synonym", + "ECK0318" + ], + [ + "gene_synonym", + "EcoGene:EG13590" + ], + [ + "gene_synonym", + "GI:16128305" + ], + [ + "gene_synonym", + "GeneID:947298" + ], + [ + "gene_synonym", + "JW0312" + ], + [ + "gene_synonym", + "NP_414854.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77187" + ], + [ + "gene_synonym", + "b0320" + ], + [ + "gene_synonym", + "yahF" + ] + ], + "dna_sequence": "ATGTCAGTTAAAATAGTCATTAAACCGAATACCTATTTTGATTCTGTCTCGCTGATGTCTATCTCCACGCGTGCAAATAAACTCGACGGCGTCGAGCAGGCATTTGTGGCGATGGCGACCGAAATGAATAAAGGCGTGCTGAAGAATTTAGGACTGCTGACGCCGGAGCTGGAGCAGGCGAAAAACGGCGACCTGATGATTGTCATCAATGGTAAATCGGGTGCGGACAACGAGCAGTTACTGGTGGAGATTGAAGAACTGTTCAACACCAAAGCGCAAAGCGGCTCGCACGAGGCGCGTTACGCCACTATTGGCAGCGCCAAAAAGCATATCCCGGAAAGTAACCTGGCGGTGATTTCGGTCAACGGTCTGTTTGCCGCTCGCGAAGCGCGTCAGGCGCTGCAAAACGATCTCAACGTGATGCTGTTTTCCGATAACGTCTCAGTTGAAGATGAACTGGCGCTCAAGCAACTGGCCCACGAAAAAGGGCTGCTGATGATGGGGCCAGACTGTGGCACGGCGATTATCAACGGCGCGGCGCTCTGTTTTGGTAACGCCGTGCGTCGCGGCAACATCGGTATTGTTGGCGCATCCGGCACCGGCAGTCAGGAGTTGAGCGTCCGCATTCATGAATTTGGCGGCGGCGTTTCGCAACTGATTGGCACCGGCGGGCGCGACCTGAGCGAGAAAATCGGCGGCCTGATGATGCTCGACGCCATCGGGATGCTGGAAAACGATCCGCAAACTGAAATCATTGCGCTTATCTCCAAACCGCCTGCGCCTGCGGTGGCCCGCAAAGTGCTGGAACGTGCGCGCGCCTGCCGCAAGCCGGTGGTCGTCTGCTTCCTCGATCGTGGCGAAACGCCAGTGGATGAGCAGGGGCTACAGTTTGCCCGCGGCACCAAAGAGGCAGCGCTAAAAGCGGTGATGCTCTCCGGCGTGAAACAGGAAAATCTCGACCTGCATACGCTTAACCAGCCGTTGATTGCGGATGTGCGTGCGCGTCTGCAACCGCAGCAGAAATACATTCGTGGCCTGTTCTGCGGCGGCACGCTGTGCGACGAAACCATGTTCGCGGTGATGGAAAAACATGGCGATGTCTACAGCAACATTCAGCCCGATCCGGAATTCCGCCTGAAAGATATCAACCGCAGCATCAAACACACCTTCCTCGACTTTGGCGATGACGACTTCACCAATGGCAAGCCGCACCCGATGATTGACCCCACCAACCGCATCAGTCGCTTGATCGAAGAGGCGCGCGATCCAGAAGTGGCGGTGATCGTGATGGATTTTGTGCTCGGATTTGGATCGCATGAAGATCCGGTCGGCTCCACCATCGAGACGATCAAAGAAGCGAAAGCGATCGCCGCTGCCGAAGGACGCGAGTTGATCATTCTCGCCTATGTGCTGGGTACCGATCTTGATACGCCATCGTTAGAACAACAAAGCCAGATGCTGCTTGATGCCGGAGTGATTCTGGCGAGCAGCAGCACCAATACCGGATTGCTGGCGCGTGAATTTATCTGCAAAGGGGAGGAAGCCTGA", + "dna_sequence_length": 1548, + "functions": [ + "putative NAD(P)-binding succinyl-CoA synthase" + ], + "id": "CDS_319", + "location": [ + [ + "NC_000913", + 336778, + "+", + 1548 + ] + ], + "md5": "16bd6b6367d1380307c1ae7af3301db1", + "parent_gene": "", + "protein_md5": "9ad8ffbceb86405433e36b45e4dd9c55", + "protein_translation": "MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA", + "protein_translation_length": 515, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001101" + ], + [ + "gene_synonym", + "ECK0319" + ], + [ + "gene_synonym", + "EcoGene:EG13591" + ], + [ + "gene_synonym", + "GI:16128306" + ], + [ + "gene_synonym", + "GeneID:945379" + ], + [ + "gene_synonym", + "JW0313" + ], + [ + "gene_synonym", + "NP_414855.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77221" + ], + [ + "gene_synonym", + "b0321" + ], + [ + "gene_synonym", + "yahG" + ] + ], + "dna_sequence": "ATGAGCCAGTCACTGTTTAGCCAACCATTGAACGTTATTAACGTCGGCATCGCCATGTTTAGCGATGACCTGAAAAAGCAGCATGTAGAAGTGACTCAACTCGACTGGACGCCGCCGGGGCAGGGCAATATGCAGGTGGTGCAGGCGCTGGATAACATTGCCGATTCGCCGCTGGCGGACAAAATCGCCGCCGCTAACCAGCAGGCGCTGGAGCGTATTATCCAGTCGCATCCGGTGCTGATTGGTTTTGATCAGGCGATTAACGTGGTGCCGGGCATGACGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTGCGGCGCGATGAAAGGCGCGGTCACCGGAGCGCTGGTGTTCGAAGGACTGGCGAAAGATCTCGACGAGGCGGCTGAACTGGCGGCTTCCGGGGAGATCACCTTCTCGCCGTGTCACGAGCACGACTGCGTGGGATCGATGGCGGGTGTTACCTCGGCCTCGATGTTTATGCACATCGTAAAAAACAAAACCTACGGCAACATCGCTTATACCAACATGAGCGAGCAGATGGCGAAGATTTTGCGTATGGGCGCTAACGACCAGAGCGTGATTGACCGCCTGAACTGGATGCGTGATGTGCAGGGACCAATACTGCGCGACGCGATGAAAATTATCGGCGAAATCGATCTGCGCTTAATGCTGGCGCAGGCGCTGCATATGGGCGATGAGTGCCATAACCGCAATAACGCCGGGACGACACTGCTGATTCAGGCGCTGACGCCGGGGATTATTCAGGCGGGTTATTCCGTCGAGCAACAGCGCGAAGTGTTTGAGTTTGTCGCCAGCAGCGACTACTTCTCCGGCCCGACGTGGATGGCGATGTGTAAAGCGGCGATGGATGCGGCGCATGGCATCGAATACAGCACCGTGGTCACCACCATGGCGCGTAACGGCGTCGAGTTCGGCCTGCGGGTCAGCGGCCTGCCGGGGCAATGGTTTACCGGCCCGGCGCAGCAGGTGATCGGCCCGATGTTTGCCGGTTATAAGCCGGAAGATTCGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGCGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGA", + "dna_sequence_length": 1419, + "functions": [ + "DUF1116 family protein" + ], + "id": "CDS_320", + "location": [ + [ + "NC_000913", + 338325, + "+", + 1419 + ] + ], + "md5": "7ea2173310e2417ae3031e8b47c2d0a7", + "parent_gene": "", + "protein_md5": "e70ae54fffaa6d941a02bbbf8257d731", + "protein_translation": "MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001107" + ], + [ + "gene_synonym", + "ECK0321" + ], + [ + "gene_synonym", + "EcoGene:EG13593" + ], + [ + "gene_synonym", + "GI:16128308" + ], + [ + "gene_synonym", + "GeneID:944984" + ], + [ + "gene_synonym", + "JW0315" + ], + [ + "gene_synonym", + "NP_414857.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77624" + ], + [ + "gene_synonym", + "b0323" + ], + [ + "gene_synonym", + "yahI" + ] + ], + "dna_sequence": "ATGAAAGAGCTTGTGGTCGTTGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAACGCCGCTGGCGAACTGTGTGGCAGATACGCAGGGCGGCATCGGCTATCTGATCCAACAGGCGCTGAATAACCGGCTGGCGCGTCACGGCGAGAAGAAAGCCGTCACCGTGGTGACTCAGGTGGAAGTGGATAAAAACGATCCAGGTTTTGCCCATCCCACCAAGCCCATCGGCGCATTCTTTAGTGACAGCCAGCGTGACGAATTACAAAAGGCAAACCCTGACTGGTGTTTTGTTGAAGATGCCGGGCGGGGCTATCGCCGCGTGGTCGCCTCGCCGGAACCGAAACGTATTGTCGAAGCACCTGCCATTAAAGCGCTGATCCAACAAGGTTTTGTCGTAATTGGCGCGGGCGGCGGTGGAATTCCGGTAGTGCGTACTGACGCGGGAGATTACCAAAGCGTGGACGCGGTTATCGACAAAGATCTCTCTACCGCGCTGCTGGCCCGTGAAATTCACGCCGACATTCTTGTGATCACCACTGGCGTCGAAAAAGTGTGTATTCACTTTGGCAAACCGCAGCAGCAGGCGCTCGATCGGGTGGATATTGCCACCATGACCCGCTATATGCAGGAAGGGCATTTCCCGCCCGGCAGCATGTTGCCAAAAATCATCGCCAGCCTGACATTTTTAGAACAAGGCGGCAAAGAAGTGATTATCACCACGCCGGAATGCCTGCCTGCGGCGCTGCGCGGCGAAACGGGCACTCATATTATTAAAACGTAA", + "dna_sequence_length": 951, + "functions": [ + "carbamate kinase-like protein" + ], + "id": "CDS_321", + "location": [ + [ + "NC_000913", + 340165, + "+", + 951 + ] + ], + "md5": "2ceeda6b2ed66a76a1a27a93e9b4f069", + "parent_gene": "", + "protein_md5": "3ed616c14a8b68224a1adb27ce200cdc", + "protein_translation": "MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHKREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001109" + ], + [ + "gene_synonym", + "ECK0322" + ], + [ + "gene_synonym", + "EcoGene:EG13594" + ], + [ + "gene_synonym", + "GI:16128309" + ], + [ + "gene_synonym", + "GeneID:944976" + ], + [ + "gene_synonym", + "JW0316" + ], + [ + "gene_synonym", + "NP_414858.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77554" + ], + [ + "gene_synonym", + "b0324" + ], + [ + "gene_synonym", + "yahJ" + ] + ], + "dna_sequence": "ATGAAAGAAAGCAATAGCCGCCGTGAATTTCTGAGCCAGAGCGGTAAGATGGTCACCGCCGCCGCGCTGTTTGGTACCTCTGTGCCGCTCGCCCATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGACAAAACCTTTTACGGCGGGCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGTACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGTTTCCGGCCTGAAAAATCTGCAAAATTTGCAGGCGGTGCTGGCGCGACGTCAGGCGGGCTTTGAGTGTGAAATCGTCGCCTTCCCGCAGCACGGTTTGCTGCTGTCGAAATCTGAACCTTTAATGCGTGAAGCGATGCAGGCGGGGGCGCATTACGTCGGCGGCCTGGACCCGACCAGTGTTGATGGCGCGATGGAAAAATCCCTCGACACCATGTTCCAGATTGCGCTGGACTACGACAAAGGCGTCGATATTCACCTGCACGAAACCACTCCGGCAGGCGTGGCAGCCATCAATTATATGGTTGAAACGGTAGAGAAAACGCCACAGCTGAAGGGCAAGCTGACCATCAGTCACGCCTTTGCGCTGGCAACGCTCAACGAGCAACAGGTAGATGAACTGGCGAACCGGATGGTGGTGCAACAAATTTCTATCGCCTCGACGGTGCCGATTGGCACGCTGCATATGCCGCTCAAACAGTTGCACGACAAAGGCGTAAAAGTGATGACTGGCACTGACAGCGTTATCGACCACTGGTCGCCTTATGGTCTGGGCGACATGCTGGAAAAAGCCAATCTGTACGCGCAGCTCTATATTCGTCCTAACGAACAGAACCTCTCCCGCTCGCTGTTTTTAGCCACTGGCGATGTATTGCCGCTGAATGAAAAAGGCGAGCGTGTATGGCCAAAAGCGCAGGATGACGCCAGCTTTGTGCTGGTGGACGCCTCCTGTTCCGCCGAGGCGGTGGCGCGTATCTCGCCGAGAACCGCAACGTTCCATAAAGGGCAACTGGTGTGGGGGAGTGTGGCAGGTTGA", + "dna_sequence_length": 1383, + "functions": [ + "putative metallo-dependent hydrolase domain deaminase" + ], + "id": "CDS_322", + "location": [ + [ + "NC_000913", + 341125, + "+", + 1383 + ] + ], + "md5": "37ebb886a8b045f8ff20b793edd7a79b", + "parent_gene": "", + "protein_md5": "8e6d41c61a016da310468948f231438f", + "protein_translation": "MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001113" + ], + [ + "gene_synonym", + "ECK0323" + ], + [ + "gene_synonym", + "EcoGene:EG13595" + ], + [ + "gene_synonym", + "GI:16128310" + ], + [ + "gene_synonym", + "GeneID:944975" + ], + [ + "gene_synonym", + "JW0317" + ], + [ + "gene_synonym", + "NP_414859.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75691" + ], + [ + "gene_synonym", + "b0325" + ], + [ + "gene_synonym", + "yahK" + ] + ], + "dna_sequence": "ATGAAGATCAAAGCTGTTGGTGCATATTCCGCTAAACAACCACTTGAACCGATGGATATCACCCGGCGTGAACCGGGACCGAATGATGTCAAAATCGAAATCGCTTACTGTGGCGTTTGCCATTCCGATCTCCACCAGGTCCGTTCCGAGTGGGCGGGGACGGTTTACCCCTGCGTGCCGGGTCATGAAATTGTGGGGCGTGTGGTAGCCGTTGGTGATCAGGTAGAAAAATATGCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCTGCGACACCGCATAAATCGCCGGAAGTTTTCAACCTGATCATGAAACGCCGTGCGATAGCCGGTTCTATGATTGGCGGCATTCCAGAAACTCAGGAGATGCTCGATTTTTGCGCCGAACATGGCATCGTGGCTGATATAGAGATGATTCGGGCCGATCAAATTAATGAAGCCTATGAGCGAATGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGA", + "dna_sequence_length": 1050, + "functions": [ + "broad specificity NADPH-dependent aldehyde reductase, Zn-containing" + ], + "id": "CDS_323", + "location": [ + [ + "NC_000913", + 342884, + "+", + 1050 + ] + ], + "md5": "9fd35892ba214bd6a73fd6d47834c972", + "parent_gene": "", + "protein_md5": "b5d80ba7a45d546018efaf0d15f43c1c", + "protein_translation": "MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001117" + ], + [ + "gene_synonym", + "ECK0324" + ], + [ + "gene_synonym", + "EcoGene:EG13596" + ], + [ + "gene_synonym", + "GI:16128311" + ], + [ + "gene_synonym", + "GeneID:944970" + ], + [ + "gene_synonym", + "JW0318" + ], + [ + "gene_synonym", + "NP_414860.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77393" + ], + [ + "gene_synonym", + "b0326" + ], + [ + "gene_synonym", + "yahL" + ] + ], + "dna_sequence": "ATGATATCATTAAAAGCTCCGCACAATAATTTGATGCCATATACGCAACAAAGCATACTTAATACGGTTAAAAACAATCAGTTACCAGAGGATATCAAAAGCTCCCTGGTTTCCTGTGTCGATATATTCAAGGTTTTGATTAAACAATATTATGATTATCCTTATGATTGTCGTGATGATTTAGTCGATGACGACAAACTCATTCATCTCATGGCTGCCGTACGAGACTGTGAGTGGTCAGACGATAACGCACTCACCATAAATGTGCAGTTTAATGATTTCCCTGGATTTTATGACTGGATGGATTACCCTGATCACCCGGTTAAGTTTGTTTTTCACATACTTGAAAATCAAAAAGGGACAGTTTGGGTATATGACCAGGATGATGCGTTTCTTGATATTAAAGCAAACGTGCAGGCTGGACGCTTTACCGGGCTTAAGAAATTAGTGCAGTTTATCGATTCAGTGCGAACAGATTGCAAATGTATTCTTCTTGAATACCATATGCCTTTGCTGAGAATTTTCCCTAAAGGGAAAGAGTGTATGCATGTGGAAAAATGGCTTCGCGAAATGTCGTCTATTCCGGAGACAGACGCGCCCATTAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAATAGAGTGCAGGAATTAGGTGACAGATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAG", + "dna_sequence_length": 816, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_324", + "location": [ + [ + "NC_000913", + 344176, + "+", + 816 + ] + ], + "md5": "b8a8678ca0bb30e5c385fb2b1eed7077", + "parent_gene": "", + "protein_md5": "01aa3a9a4485110e530f4034332630cc", + "protein_translation": "MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001120" + ], + [ + "gene_synonym", + "ECK0325" + ], + [ + "gene_synonym", + "EcoGene:EG13597" + ], + [ + "gene_synonym", + "GI:90111114" + ], + [ + "gene_synonym", + "GeneID:944969" + ], + [ + "gene_synonym", + "JW5044" + ], + [ + "gene_synonym", + "NP_414861.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75692" + ], + [ + "gene_synonym", + "b0327" + ], + [ + "gene_synonym", + "yahM" + ] + ], + "dna_sequence": "ATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGGAGAGTGGGCTGAAATGGGAAGCTAAAGACTCAAGTAAACTTATCGGAAATAAGGACCACGCATTACGGGGGCTATCATCGCCGATGGCCGTGATTCGGCAAATCAGGTTGATTACGTAG", + "dna_sequence_length": 246, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_325", + "location": [ + [ + "NC_000913", + 345404, + "+", + 246 + ] + ], + "md5": "e68509ae2cc64a01b177091e60c00eb2", + "parent_gene": "", + "protein_md5": "b1eb28d966647641742f8ce38cfe4784", + "protein_translation": "MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGRPMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001122" + ], + [ + "gene_synonym", + "ECK0326" + ], + [ + "gene_synonym", + "EcoGene:EG13598" + ], + [ + "gene_synonym", + "GI:16128313" + ], + [ + "gene_synonym", + "GeneID:944968" + ], + [ + "gene_synonym", + "JW0320" + ], + [ + "gene_synonym", + "NP_414862.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75693" + ], + [ + "gene_synonym", + "b0328" + ], + [ + "gene_synonym", + "yahN" + ] + ], + "dna_sequence": "ATGATGCAGTTAGTTCACTTATTTATGGATGAAATCACTATGGATCCTTTGCATGCCGTTTACCTGACCGTAGGACTGTTCGTGATTACTTTTTTTAATCCGGGAGCCAATCTCTTTGTGGTAGTACAAACCAGCCTGGCTTCCGGTCGACGCGCAGGGGTGCTGACCGGGCTGGGCGTGGCGCTGGGCGATGCATTTTATTCCGGGTTGGGTTTGTTTGGTCTTGCAACGCTAATTACGCAGTGTGAGGAGATTTTTTCGCTTATCAGAATCGTCGGCGGCGCTTATCTCTTATGGTTTGCGTGGTGCAGCATGCGCCGCCAGTCAACACCGCAAATGAGCACACTACAACAACCGATTAGCGCCCCCTGGTATGTCTTTTTTCGCCGCGGATTAATTACCGATCTCTCTAACCCGCAAACCGTTTTATTTTTTATCAGTATTTTCTCAGTAACATTAAATGCCGAAACACCAACATGGGCACGTTTAATGGCCTGGGCGGGGATTGTGCTCGCATCAATTATCTGGCGAGTTTTTCTTAGTCAGGCGTTTTCTTTGCCCGCTGTGCGTCGTGCTTATGGGCGTATGCAACGCGTTGCCAGTCGGGTTATTGGTGCAATTATTGGTGTATTCGCGCTACGCCTGATTTACGAAGGGGTGACGCAGCGGTGA", + "dna_sequence_length": 672, + "functions": [ + "amino acid exporter for proline, lysine, glutamate, homoserine" + ], + "id": "CDS_326", + "location": [ + [ + "NC_000913", + 346337, + "-", + 672 + ] + ], + "md5": "daf5ebc0a667e4396f90e0194c25051b", + "parent_gene": "", + "protein_md5": "b531e00f95f85a5ec05889314c227143", + "protein_translation": "MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001130" + ], + [ + "gene_synonym", + "ECK0327" + ], + [ + "gene_synonym", + "EcoGene:EG13599" + ], + [ + "gene_synonym", + "GI:16128314" + ], + [ + "gene_synonym", + "GeneID:944985" + ], + [ + "gene_synonym", + "JW0321" + ], + [ + "gene_synonym", + "NP_414863.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75694" + ], + [ + "gene_synonym", + "b0329" + ], + [ + "gene_synonym", + "yahO" + ] + ], + "dna_sequence": "ATGAAAATAATCTCTAAAATGTTAGTCGGTGCGTTAGCGTTAGCCGTTACCAATGTCTATGCCGCTGAATTGATGACCAAAGCGGAATTTGAAAAAGTTGAATCGCAGTATGAAAAAATAGGTGATATTTCAACCAGCAATGAAATGTCGACTGCAGATGCAAAAGAAGATTTGATCAAAAAAGCGGATGAAAAAGGGGCTGATGTGTTGGTACTGACCTCCGGTCAAACTGACAATAAGATCCACGGCACGGCAAATATTTATAAGAAGAAGTAA", + "dna_sequence_length": 276, + "functions": [ + "periplasmic protein, function unknown, YhcN family" + ], + "id": "CDS_327", + "location": [ + [ + "NC_000913", + 346484, + "+", + 276 + ] + ], + "md5": "cf779ac811c9de1a998c6ef0db023590", + "parent_gene": "", + "protein_md5": "17a73fa6504185e959ec2bc37e59a4af", + "protein_translation": "MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001133" + ], + [ + "gene_synonym", + "ECK0328" + ], + [ + "gene_synonym", + "EcoGene:EG13600" + ], + [ + "gene_synonym", + "GI:16128315" + ], + [ + "gene_synonym", + "GeneID:944987" + ], + [ + "gene_synonym", + "JW0322" + ], + [ + "gene_synonym", + "NP_414864.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77743" + ], + [ + "gene_synonym", + "b0330" + ], + [ + "gene_synonym", + "prpR" + ], + [ + "gene_synonym", + "yahP" + ] + ], + "dna_sequence": "ATGGCACATCCACCACGGCTTAATGACGACAAACCGGTTATCTGGACGGTATCTGTAACGCGCCTGTTCGAGCTGTTTCGCGATATCAGCCTCGAGTTTGATCACCTGGCGAACATTACCCCTATTCAGCTTGGCTTTGAAAAAGCAGTGACCTACATCCGCAAGAAACTGGCAAACGAACGCTGTGACGCCATCATCGCGGCTGGCTCTAACGGCGCGTACCTGAAAAGCCGCCTGTCAGTGCCAGTTATTTTGATTAAACCGAGCGGCTACGATGTGTTACAGGCACTGGCAAAAGCCGGAAAACTCACCTCTTCTATCGGCGTTGTCACCTATCAGGAAACCATTCCAGCGCTGGTGGCGTTTCAAAAAACCTTTAATTTGCGCCTCGACCAACGTAGCTACATTACCGAGGAAGACGCACGCGGGCAGATTAACGAGCTAAAAGCTAACGGCACCGAAGCGGTGGTCGGCGCAGGGCTGATTACCGATTTGGCAGAAGAAGCCGGAATGACCGGAATTTTTATCTATTCCGCCGCCACCGTGCGCCAGGCGTTCAGCGATGCGCTGGATATGACGCGCATGTCGTTACGCCATAACACTCACGATGCCACCCGCAACGCCCTGCGTACTCGTTACGTGCTGGGCGATATGCTCGGTCAATCACCACAGATGGAACAAGTACGGCAGACTATTTTGCTGTATGCCCGCTCCAGTGCGGCGGTGTTGATTGAGGGGGAAACGGGGACGGGCAAAGAGCTGGCGGCCCAGGCGATTCATCGGGAATATTTTGCCCGCCACGATGCGCGACAGGGCAAAAAGTCGCATCCGTTTGTTGCCGTCAACTGCGGGGCGATTGCCGAATCGCTGCTGGAAGCAGAACTGTTTGGCTATGAGGAAGGGGCGTTTACCGGCTCGCGACGCGGAGGTCGCGCCGGGCTGTTCGAAATTGCCCACGGCGGTACGCTGTTTCTGGATGAGATTGGCGAAATGCCGCTACCTTTGCAGACCCGGCTGCTGCGGGTGCTGGAAGAAAAAGAGGTCACCCGCGTCGGCGGGCATCAGCCTGTTCCGGTAGATGTACGGGTCATTAGCGCCACTCACTGCAATCTGGAAGAAGATATGCAGCAAGGACGTTTTCGCCGTGATCTGTTTTATCGGCTGAGTATTTTGCGTCTGCAATTGCCACCACTGCGCGAGCGGGTGGCGGATATTCTTCCGCTGGCGGAAAGCTTTTTGAAAGTGTCTCTGGCGGCGCTCTCCGCCCCATTTTCTGCTGCATTACGCCAGGGGTTACAGGCAAGTGAAACTGTGCTGCTGCACTACGACTGGCCAGGCAATATTCGTGAACTGCGCAATATGATGGAACGACTGGCGCTGTTTTTAAGTGTGGAACCGACGCCGGATTTAACGCCGCAGTTTATGCAACTGCTACTGCCGGAACTGGCGCGCGAGTCGGCGAAAACTCCCGCTCCACGCTTACTGACACCACAACAGGCACTGGAGAAATTTAATGGCGATAAAACAGCAGCGGCGAATTATTTAGGCATCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGA", + "dna_sequence_length": 1587, + "functions": [ + "propionate catabolism operon regulatory protein" + ], + "id": "CDS_328", + "location": [ + [ + "NC_000913", + 348443, + "-", + 1587 + ] + ], + "md5": "ee239cb2d8cf195204dc8a4d24128cc1", + "parent_gene": "", + "protein_md5": "2ac1fc3edc70d832fcf553664d8e3ee7", + "protein_translation": "MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS", + "protein_translation_length": 528, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001138" + ], + [ + "gene_synonym", + "ECK0329" + ], + [ + "gene_synonym", + "EcoGene:EG13601" + ], + [ + "gene_synonym", + "GI:16128316" + ], + [ + "gene_synonym", + "GeneID:944990" + ], + [ + "gene_synonym", + "JW0323" + ], + [ + "gene_synonym", + "NP_414865.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77541" + ], + [ + "gene_synonym", + "b0331" + ], + [ + "gene_synonym", + "prpB" + ], + [ + "gene_synonym", + "yahQ" + ] + ], + "dna_sequence": "ATGTCTCTACACTCTCCAGGTAAAGCGTTTCGCGCTGCACTGACTAAAGAAAATCCATTGCAGATTGTTGGCACCATCAACGCTAATCATGCGCTGTTGGCGCAGCGTGCCGGATATCAGGCAATTTATCTTTCTGGCGGTGGCGTGGCGGCAGGTTCGCTGGGGCTGCCCGATCTCGGTATTTCTACCCTTGATGATGTGCTGACCGACATTCGCCGTATCACCGACGTTTGTTCGCTGCCGCTGCTGGTGGATGCGGATATCGGTTTTGGTTCTTCGGCCTTTAACGTGGCGCGCACCGTGAAATCGATGATTAAAGCCGGTGCGGCAGGATTGCATATTGAAGATCAGGTTGGTGCGAAACGCTGCGGTCATCGTCCGAATAAAGCGATCGTCTCGAAAGAAGAGATGGTGGATCGGATCCGCGCGGCGGTGGATGCGAAAACCGATCCTGATTTTGTGATCATGGCGCGCACCGATGCTCTGGCGGTAGAGGGGCTGGATGCGGCGATCGAGCGTGCGCAGGCCTATGTTGAAGCGGGTGCCGAGATGTTGTTCCCGGAGGCGATTACCGAACTCGCCATGTACCGCCAGTTTGCCGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAA", + "dna_sequence_length": 891, + "functions": [ + "2-methylisocitrate lyase" + ], + "id": "CDS_329", + "location": [ + [ + "NC_000913", + 348682, + "+", + 891 + ] + ], + "md5": "bb2ef7de19e8cf09ed2469b510d84c40", + "parent_gene": "", + "protein_md5": "1c117956dd932bba0dc42cc8709188d8", + "protein_translation": "MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFARSQVK", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001148" + ], + [ + "gene_synonym", + "ECK0330" + ], + [ + "gene_synonym", + "EcoGene:EG11756" + ], + [ + "gene_synonym", + "GI:16128318" + ], + [ + "gene_synonym", + "GeneID:947528" + ], + [ + "gene_synonym", + "JW0324" + ], + [ + "gene_synonym", + "NP_414867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31660" + ], + [ + "gene_synonym", + "b0333" + ], + [ + "gene_synonym", + "prpC" + ], + [ + "gene_synonym", + "yahS" + ], + [ + "gene_synonym", + "yzzD" + ] + ], + "dna_sequence": "ATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGAAAAAATCTGTGGCACTTTCTGGCGTTCCGGCGGGCAATACGGCGCTCTGCACCGTGGGTAAAAGTGGCAATGACCTGCATTACCGCGGCTACGATATTCTTGATCTGGCGAAACATTGCGAATTTGAAGAAGTGGCGCATCTGCTGATCCACGGCAAACTGCCGACCCGTGACGAACTCGCCGCTTACAAAACGAAACTGAAAGCCCTGCGCGGTTTACCGGCTAACGTGCGTACCGTGCTGGAAGCCTTACCGGCGGCGTCGCACCCGATGGATGTTATGCGCACCGGTGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCATACCGTCTCTGGCGCGCGGGATATTGCCGACAAACTGCTGGCGTCGCTTAGCTCGATTCTCCTTTATTGGTATCACTACAGCCACAACGGCGAACGCATCCAACCGGAAACCGATGACGACTCCATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCATCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCCTCCACCTTTACCAGTCGGGTGATTGCGGGCACCGGCTCTGATATGTATTCCGCGATTATTGGCGCGATTGGCGCACTGCGCGGGCCAAAACACGGCGGGGCGAATGAAGTGTCGCTGGAGATCCAGCAACGCTACGAAACGCCGGACGAAGCCGAAGCAGATATCCGCAAGCGCGTGGAAAACAAAGAAGTGGTCATTGGTTTTGGTCATCCGGTTTACACCATCGCTGACCCGCGCCACCAGGTGATTAAACGTGTGGCGAAGCAGCTCTCGCAGGAAGGCGGCTCGCTGAAGATGTACAACATCGCCGATCGCCTGGAAACGGTGATGTGGGAGAGCAAAAAGATGTTCCCCAATCTCGACTGGTTCTCTGCTGTTTCCTACAACATGATGGGCGTTCCCACCGAGATGTTCACACCACTGTTTGTTATCGCCCGCGTCACCGGCTGGGCGGCGCACATTATCGAACAACGTCAGGACAACAAAATTATCCGTCCTTCCGCCAATTATGTTGGACCGGAAGACCGCCCGTTTGTCGCGCTGGATAAGCGCCAGTAA", + "dna_sequence_length": 1170, + "functions": [ + "2-methylcitrate synthase" + ], + "id": "CDS_330", + "location": [ + [ + "NC_000913", + 350012, + "+", + 1170 + ] + ], + "md5": "42f10effe6288bdb4341d89f7890a7dd", + "parent_gene": "", + "protein_md5": "d7cbd5caf74a75301da0d8b5cae459f3", + "protein_translation": "MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ", + "protein_translation_length": 389, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001152" + ], + [ + "gene_synonym", + "ECK0331" + ], + [ + "gene_synonym", + "EcoGene:EG13603" + ], + [ + "gene_synonym", + "GI:16128319" + ], + [ + "gene_synonym", + "GeneID:945931" + ], + [ + "gene_synonym", + "JW0325" + ], + [ + "gene_synonym", + "NP_414868.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77243" + ], + [ + "gene_synonym", + "acnC" + ], + [ + "gene_synonym", + "b0334" + ], + [ + "gene_synonym", + "prpD" + ], + [ + "gene_synonym", + "yahT" + ] + ], + "dna_sequence": "ATGTCAGCTCAAATCAACAACATCCGCCCGGAATTTGATCGTGAAATCGTTGATATCGTCGATTACGTCATGAACTACGAAATCAGCTCTAAAGTGGCCTACGACACCGCACATTACTGCCTGCTCGACACGCTCGGCTGCGGTCTGGAAGCTCTCGAATACCCGGCCTGTAAAAAACTGCTGGGGCCAATTGTTCCCGGCACCGTCGTACCCAACGGCGTGCGCGTCCCCGGAACTCAGTTCCAGCTCGACCCCGTCCAGGCGGCATTTAACATCGGCGCGATGATCCGCTGGCTCGATTTCAACGATACCTGGCTGGCGGCGGAGTGGGGCCATCCTTCCGACAACCTCGGCGGCATTCTGGCAACGGCGGACTGGCTTTCGCGCAACGCGGTCGCCAGCGGCAAAGCGCCGTTGACCATGAAACAGGTGCTGACCGCAATGATCAAAGCCCATGAAATTCAGGGCTGCATCGCGCTGGAAAACTCCTTTAACCGCGTCGGCCTCGACCACGTTCTGTTAGTGAAAGTGGCTTCCACCGCCGTGGTCGCCGAAATGCTCGGCCTGACCCGCGAGGAAATTCTCAACGCCGTTTCGCTGGCGTGGGTGGACGGTCAGTCGCTGCGCACCTATCGCCATGCGCCGAACACCGGCACGCGTAAATCCTGGGCGGCGGGCGATGCCACTTCCCGCGCGGTACGTCTGGCACTGATGGCGAAAACGGGCGAAATGGGTTACCCGTCAGCCCTGACTGCGCCGGTGTGGGGCTTCTACGACGTCTCCTTTAAAGGTGAATCGTTCCGCTTCCAGCGCCCGTACGGTTCCTACGTTATGGAAAATGTGCTGTTCAAAATCTCCTTCCCGGCGGAGTTCCACTCCCAGACGGCAGTTGAAGCAGCGATGACGCTCTATGAACAGATGCAGGCAGCAGGCAAAACGGCGGCGGATATCGAAAAAGTGACCATTCGCACCCACGAAGCCTGTATTCGCATCATCGACAAAAAAGGGCCGCTCAATAACCCGGCAGACCGCGATCACTGCATTCAGTACATGGTGGCGATCCCGCTGCTATTCGGGCGCTTAACGGCGGCAGATTACGAGGACAACGTTGCGCAAGATAAACGCATTGACGCCCTGCGCGAGAAGATCAATTGCTTTGAAGATCCGGCATTTACCGCTGACTACCACGACCCGGAAAAACGCGCCATCGCCAATGCCATTACCCTTGAGTTCACCGACGGCACACGATTTGAAGAAGTGGTGGTGGAGTACCCCATTGGTCATGCTCGCCGCCGTCAGGATGGTATTCCGAAACTGGTCGATAAATTCAAAATCAATCTCGCGCGCCAGTTCCCGACTCGCCAACAGCAGCGCATTCTGGAGGTTTCTCTCGACAGAGCTCGCCTGGAACAGATGCCGGTCAATGAGTATCTCGACCTGTACGTCATTTAA", + "dna_sequence_length": 1452, + "functions": [ + "2-methylcitrate dehydratase" + ], + "id": "CDS_331", + "location": [ + [ + "NC_000913", + 351215, + "+", + 1452 + ] + ], + "md5": "e7457f3e638738d7c715b68a1fed0a1c", + "parent_gene": "", + "protein_md5": "685e109994c1166c5b0021c666f95f19", + "protein_translation": "MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKKLLGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIALENSFNRVGLDHVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRARLEQMPVNEYLDLYVI", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001154" + ], + [ + "gene_synonym", + "ECK0332" + ], + [ + "gene_synonym", + "EcoGene:EG13604" + ], + [ + "gene_synonym", + "GI:16128320" + ], + [ + "gene_synonym", + "GeneID:946891" + ], + [ + "gene_synonym", + "JW0326" + ], + [ + "gene_synonym", + "NP_414869.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77495" + ], + [ + "gene_synonym", + "b0335" + ], + [ + "gene_synonym", + "prpE" + ], + [ + "gene_synonym", + "yahU" + ] + ], + "dna_sequence": "ATGTCTTTTAGCGAATTTTATCAGCGTTCGATTAACGAACCGGAGCAGTTCTGGGCCGAGCAGGCCCGGCGTATTGACTGGCAGACGCCCTTTACGCAAACGCTCGATCACAGCAATCCGCCGTTTGCCCGTTGGTTTTGTGAAGGCCGAACCAACTTGTGCCACAACGCCATCGACCGCTGGCTGGAGAAACAGCCAGAGGCGCTGGCGCTGATTGCCGTCTCTTCGGAAACAGAAGAAGAGCGCACCTTTACCTTTCGTCAGCTGCATGACGAAGTGAACGCGGTGGCCTCAATGTTGCGTTCATTGGGTGTGCAGCGCGGCGATCGGGTGCTGGTGTATATGCCGATGATTGCCGAAGCGCATATTACTCTGCTGGCCTGCGCGCGCATTGGCGCTATTCACTCGGTGGTGTTTGGTGGATTTGCCTCGCACAGCGTGGCGGCGCGAATTGATGACGCTAAACCGGTGCTGATTGTCTCGGCTGATGCCGGAGCGCGCGGTGGCAAAATCATTCCCTATAAAAAATTGCTCGACGATGCGATAAGTCAGGCGCAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGACCTGGCCGGACTGCGGCGTGTGGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCTGAAAAAATTCCCTACCGCTGAAATTCGCAAACACGATCTCTCGTCGCTGGAAGTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCAATACGCTGGATGTGCCGGTCATCGACAACTACTGGCAGACCGAATCCGGCTGGCCGATTATGGCGATTGCTCGCGGTCTGGACGACAGGCCGACGCGTCTGGGAAGCCCCGGTGTGCCGATGTATGGCTATAACGTGCAGTTGCTTAATGAAGTCACCGGCGAACCGTGTGGCGTCAACGAGAAAGGGATGCTGGTGGTGGAAGGGCCGCTGCCGCCGGGGTGTATTCAGACCATCTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAGAGAAGGCGATTATGGCGCTGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAG", + "dna_sequence_length": 1887, + "functions": [ + "propionate--CoA ligase" + ], + "id": "CDS_332", + "location": [ + [ + "NC_000913", + 352706, + "+", + 1887 + ] + ], + "md5": "643b4c713ff62bf582f50ded85fb6694", + "parent_gene": "", + "protein_md5": "d4dbd6598de83d83528ba1e7fa58c927", + "protein_translation": "MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQHIGARVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSVFFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWTIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDRDVAHSQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQAMEE", + "protein_translation_length": 628, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001159" + ], + [ + "gene_synonym", + "ECK0333" + ], + [ + "gene_synonym", + "EcoGene:EG11327" + ], + [ + "gene_synonym", + "GI:16128321" + ], + [ + "gene_synonym", + "GeneID:944994" + ], + [ + "gene_synonym", + "JW0327" + ], + [ + "gene_synonym", + "NP_414870.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA82" + ], + [ + "gene_synonym", + "b0336" + ], + [ + "gene_synonym", + "codB" + ] + ], + "dna_sequence": "GTGTCGCAAGATAACAACTTTAGCCAGGGGCCAGTCCCGCAGTCGGCGCGGAAAGGGGTATTGGCATTGACGTTCGTCATGCTGGGATTAACCTTCTTTTCCGCCAGTATGTGGACCGGCGGCACTCTCGGAACCGGTCTTAGCTATCATGATTTCTTCCTCGCAGTTCTCATCGGTAATCTTCTCCTCGGTATTTACACTTCATTTCTCGGTTACATTGGCGCAAAAACCGGCCTGACCACTCATCTTCTTGCTCGCTTCTCGTTTGGTGTTAAAGGCTCATGGCTGCCTTCACTGCTACTGGGCGGAACTCAGGTTGGCTGGTTTGGCGTCGGTGTGGCGATGTTTGCCATTCCGGTGGGTAAGGCAACCGGGCTGGATATTAATTTGCTGATTGCCGTTTCCGGTTTACTGATGACCGTCACCGTCTTTTTTGGCATTTCGGCGCTGACGGTTCTTTCGGTGATTGCGGTTCCGGCTATCGCCTGCCTGGGCGGTTATTCCGTGTGGCTGGCTGTTAACGGCATGGGCGGCCTGGACGCATTAAAAGCGGTCGTTCCCGCACAACCGTTAGATTTCAATGTCGCGCTGGCGCTGGTTGTGGGGTCATTTATCAGTGCGGGTACGCTCACCGCTGACTTTGTCCGGTTTGGTCGCAATGCCAAACTGGCGGTGCTGGTGGCGATGGTGGCCTTTTTCCTCGGCAACTCGTTGATGTTTATTTTCGGTGCAGCGGGCGCTGCGGCACTGGGCATGGCGGATATCTCTGATGTGATGATTGCTCAGGGCCTGCTGCTGCCTGCGATTGTGGTGCTGGGGCTGAATATCTGGACCACCAACGATAACGCACTCTATGCGTCGGGTTTAGGTTTCGCCAACATTACCGGGATGTCGAGCAAAACCCTTTCGGTAATCAACGGTATTATCGGTACGGTCTGCGCATTATGGCTGTATAACAATTTTGTCGGCTGGTTGACCTTCCTTTCGGCAGCTATTCCTCCAGTGGGTGGCGTGATCATCGCCGACTATCTGATGAACCGTCGCCGCTATGAGCACTTTGCGACCACGCGTATGATGAGTGTCAATTGGGTGGCGATTCTGGCGGTCGCCTTGGGGATTGCTGCAGGCCACTGGTTACCGGGAATTGTTCCGGTCAACGCGGTATTAGGTGGCGCGCTGAGCTATCTGATCCTTAACCCGATTTTGAATCGTAAAACGACAGCAGCAATGACGCATGTGGAGGCTAACAGTGTCGAATAA", + "dna_sequence_length": 1260, + "functions": [ + "cytosine transporter" + ], + "id": "CDS_333", + "location": [ + [ + "NC_000913", + 354922, + "+", + 1260 + ] + ], + "md5": "de2c81d0d182e6af25ddf26d3b62414f", + "parent_gene": "", + "protein_md5": "6858c3474c4dbbd401c74617222094b0", + "protein_translation": "MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLGTGLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLDALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFGRNAKLAVLVAMVAFFLGNSLMFIFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATTRMMSVNWVAILAVALGIAAGHWLPGIVPVNAVLGGALSYLILNPILNRKTTAAMTHVEANSVE", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001161" + ], + [ + "gene_synonym", + "ECK0334" + ], + [ + "gene_synonym", + "EcoGene:EG11326" + ], + [ + "gene_synonym", + "GI:16128322" + ], + [ + "gene_synonym", + "GeneID:944996" + ], + [ + "gene_synonym", + "JW0328" + ], + [ + "gene_synonym", + "NP_414871.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25524" + ], + [ + "gene_synonym", + "b0337" + ], + [ + "gene_synonym", + "codA" + ] + ], + "dna_sequence": "GTGTCGAATAACGCTTTACAAACAATTATTAACGCCCGGTTACCAGGCGAAGAGGGGCTGTGGCAGATTCATCTGCAGGACGGAAAAATCAGCGCCATTGATGCGCAATCCGGCGTGATGCCCATAACTGAAAACAGCCTGGATGCCGAACAAGGTTTAGTTATACCGCCGTTTGTGGAGCCACATATTCACCTGGACACCACGCAAACCGCCGGACAACCGAACTGGAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGAAGTGAAGCAGGAAGTCGCGCCGTGGATTGATCTGCAAATCGTCGCCTTCCCTCAGGAAGGGATTTTGTCGTATCCCAACGGTGAAGCGTTGCTGGAAGAGGCGTTACGCTTAGGGGCAGATGTAGTGGGGGCGATTCCGCATTTTGAATTTACCCGTGAATACGGCGTGGAGTCGCTGCATAAAACCTTCGCCCTGGCGCAAAAATACGACCGTCTCATCGACGTTCACTGTGATGAGATCGATGACGAGCAGTCGCGCTTTGTCGAAACCGTTGCTGCCCTGGCGCACCATGAAGGCATGGGCGCGCGAGTCACCGCCAGCCACACCACGGCAATGCACTCCTATAACGGGGCGTATACCTCACGCCTGTTCCGCTTGCTGAAAATGTCCGGTATTAACTTTGTCGCCAACCCGCTGGTCAATATTCATCTGCAAGGACGTTTCGATACGTATCCAAAACGTCGCGGCATCACGCGCGTTAAAGAGATGCTGGAGTCCGGCATTAACGTCTGCTTTGGTCACGATGATGTCTTCGATCCGTGGTATCCGCTGGGAACGGCGAATATGCTGCAAGTGCTGCATATGGGGCTGCATGTTTGCCAGTTGATGGGCTACGGGCAGATTAACGATGGCCTGAATTTAATCACCCACCACAGCGCAAGGACGTTGAATTTGCAGGATTACGGCATTGCCGCCGGAAACAGCGCCAACCTGATTATCCTGCCGGCTGAAAATGGGTTTGATGCGCTGCGCCGTCAGGTTCCGGTACGTTATTCGGTACGTGGCGGCAAGGTGATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGA", + "dna_sequence_length": 1284, + "functions": [ + "cytosine/isoguanine deaminase" + ], + "id": "CDS_334", + "location": [ + [ + "NC_000913", + 356171, + "+", + 1284 + ] + ], + "md5": "429414425322759d425f2c6007ee9af1", + "parent_gene": "", + "protein_md5": "a6e25223f14065f44e16af6ec7717ba1", + "protein_translation": "MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001165" + ], + [ + "gene_synonym", + "ECK0335" + ], + [ + "gene_synonym", + "EcoGene:EG11421" + ], + [ + "gene_synonym", + "GI:157783149" + ], + [ + "gene_synonym", + "GeneID:945001" + ], + [ + "gene_synonym", + "JW5894" + ], + [ + "gene_synonym", + "NP_414872.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27111" + ], + [ + "gene_synonym", + "b0338" + ], + [ + "gene_synonym", + "cynR" + ] + ], + "dna_sequence": "ATGCTCTCTCGACATATCAATTATTTTCTTGCCGTGGCTGAACATGGCAGCTTCACCCGTGCCGCCAGTGCGTTGCACGTCTCCCAACCTGCGCTTTCCCAGCAGATTCGCCAGTTAGAGGAGAGTTTAGGCGTGCCGCTGTTTGACCGTAGCGGGCGAACGATTCGTCTCACTGATGCAGGAGAAGTCTGGCGACAGTACGCCAGCCGGGCGTTACAGGAACTGGGGGCGGGTAAACGGGCGATTCATGATGTTGCCGATCTGACGCGAGGATCGCTGCGTATCGCCGTCACCCCCACCTTTACGAGCTACTTTATCGGCCCCTTAATGGCGGATTTCTATGCGCGCTATCCCAGCATCACGCTCCAGCTACAGGAAATGTCGCAGGAGAAAATCGAGGATATGCTTTGCCGCGACGAGTTGGACGTTGGGATTGCCTTCGCGCCTGTGCATTCGCCGGAGCTGGAGGCAATTCCTTTACTGACAGAAAGTTTAGCGTTAGTCGTGGCGCAACATCATCCGCTGGCCGTCCATGAACAGGTGGCGTTGAGTCGCTTGCATGATGAAAAACTGGTCCTGCTCAGCGCGGAATTTGCCACCAGAGAGCAAATTGACCACTACTGCGAGAAAGCGGGGCTACATCCACAGGTGGTCATTGAGGCGAACTCAATTAGCGCGGTTCTGGAGCTGATTCGCCGCACTTCCCTTTCCACATTGTTACCAGCAGCGATTGCCACACAACATGACGGGCTTAAAGCTATTTCTCTTGCCCCGCCACTACTGGAGAGAACGGCGGTTTTGTTGCGGCGGAAAAATAGCTGGCAGACAGCCGCCGCGAAGGCATTTTTGCACATGGCGTTGGATAAATGCGCGGTTGTTGGCGGAAATGAATCACGGTAG", + "dna_sequence_length": 900, + "functions": [ + "transcriptional activator of cyn operon", + "autorepressor" + ], + "id": "CDS_335", + "location": [ + [ + "NC_000913", + 358690, + "-", + 900 + ] + ], + "md5": "5520eb431efea2b8b34a8f113279fd5c", + "parent_gene": "", + "protein_md5": "4f3949c2d64173f0904786f1e9fb240f", + "protein_translation": "MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001171" + ], + [ + "gene_synonym", + "ECK0336" + ], + [ + "gene_synonym", + "EcoGene:EG10176" + ], + [ + "gene_synonym", + "GI:16128324" + ], + [ + "gene_synonym", + "GeneID:946548" + ], + [ + "gene_synonym", + "JW0330" + ], + [ + "gene_synonym", + "NP_414873.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABE9" + ], + [ + "gene_synonym", + "b0339" + ], + [ + "gene_synonym", + "cynT" + ] + ], + "dna_sequence": "GTGAAAGAGATTATTGATGGATTCCTTAAATTCCAGCGCGAGGCATTTCCGAAGCGGGAAGCCTTGTTTAAACAGCTGGCGACACAGCAAAGCCCGCGCACACTTTTTATCTCCTGCTCCGACAGCCGTCTGGTCCCTGAGCTGGTGACGCAACGTGAGCCTGGCGATCTGTTCGTTATTCGCAACGCGGGCAATATCGTCCCTTCCTACGGGCCGGAACCCGGTGGCGTTTCTGCTTCGGTGGAGTATGCCGTCGCTGCGCTTCGGGTATCTGACATTGTGATTTGTGGTCATTCCAACTGTGGCGCGATGACCGCCATTGCCAGCTGTCAGTGCATGGACCATATGCCTGCCGTCTCCCACTGGCTGCGTTATGCCGATTCAGCCCGCGTCGTTAATGAGGCGCGCCCGCATTCCGATTTACCGTCAAAAGCTGCGGCGATGGTACGTGAAAACGTCATTGCTCAGTTGGCTAATTTGCAAACTCATCCATCGGTGCGCCTGGCGCTCGAAGAGGGGCGGATCGCCCTGCACGGCTGGGTCTACGACATTGAAAGCGGCAGCATCGCAGCTTTTGACGGCGCAACCCGCCAGTTTGTGCCACTGGCCGCTAATCCTCGCGTTTGTGCCATACCGCTACGCCAACCGACCGCAGCGTAA", + "dna_sequence_length": 660, + "functions": [ + "carbonic anhydrase" + ], + "id": "CDS_336", + "location": [ + [ + "NC_000913", + 358799, + "+", + 660 + ] + ], + "md5": "27724c05b6f3622a93fe1416df443022", + "parent_gene": "", + "protein_md5": "a309cdb0fb30afb9f46c21965e99a2c6", + "protein_translation": "MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFDGATRQFVPLAANPRVCAIPLRQPTAA", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001173" + ], + [ + "gene_synonym", + "ECK0337" + ], + [ + "gene_synonym", + "EcoGene:EG10175" + ], + [ + "gene_synonym", + "GI:16128325" + ], + [ + "gene_synonym", + "GeneID:948998" + ], + [ + "gene_synonym", + "JW0331" + ], + [ + "gene_synonym", + "NP_414874.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00816" + ], + [ + "gene_synonym", + "b0340" + ], + [ + "gene_synonym", + "cnt" + ], + [ + "gene_synonym", + "cynS" + ] + ], + "dna_sequence": "ATGATTCAGTCACAAATTAACCGCAATATTCGTCTTGATCTTGCCGATGCCATTTTGCTCAGCAAAGCTAAAAAAGATCTCTCATTTGCCGAGATTGCCGACGGCACCGGTCTGGCAGAAGCCTTTGTAACCGCGGCTTTGCTGGGTCAGCAGGCGCTTCCTGCCGACGCCGCCCGCCTGGTCGGGGCGAAGCTGGATCTCGACGAAGACTCCATTCTACTGTTGCAGATGATTCCACTGCGTGGCTGCATTGATGACCGTATTCCAACTGACCCAACGATGTATCGTTTCTATGAAATGTTGCAGGTGTACGGTACAACCCTGAAAGCGTTGGTTCATGAGAAATTTGGCGATGGCATTATTAGCGCGATTAACTTCAAACTCGACGTTAAGAAAGTGGCGGACCCGGAAGGTGGCGAACGTGCGGTCATCACCTTAGATGGTAAATATCTGCCGACCAAACCGTTCTGA", + "dna_sequence_length": 471, + "functions": [ + "cyanate aminohydrolase" + ], + "id": "CDS_337", + "location": [ + [ + "NC_000913", + 359489, + "+", + 471 + ] + ], + "md5": "1de407aad4499b1d9ebd5a7003601663", + "parent_gene": "", + "protein_md5": "1a86bc8e069e57eaa8c799523a09c105", + "protein_translation": "MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001175" + ], + [ + "gene_synonym", + "ECK0338" + ], + [ + "gene_synonym", + "EcoGene:EG10177" + ], + [ + "gene_synonym", + "GI:16128326" + ], + [ + "gene_synonym", + "GeneID:946770" + ], + [ + "gene_synonym", + "JW0332" + ], + [ + "gene_synonym", + "NP_414875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17583" + ], + [ + "gene_synonym", + "b0341" + ], + [ + "gene_synonym", + "cynX" + ] + ], + "dna_sequence": "ATGCTGCTGGTACTGGTGCTGATTGGTCTTAATATGCGACCACTGCTCACCTCCGTCGGGCCACTGCTACCGCAATTGCGCCAGGCGAGCGGAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGGCGGCGGTGGGCTTGGTGCCGCCATAACGCCCTGGTTAGTTCAACATAGCGAAACCTGGTATCAAACACTCGCCTGGTGGGCGCTGCCTGCCGTTGTTGCGCTCTTTGCCTGGTGGTGGCAAAGCGCCCGCGAGGTCGCCTCTTCCCACAAGACAACAACCACTCCGGTTCGCGTGGTATTCACTCCCCGCGCGTGGACGCTGGGTGTTTACTTCGGTCTGATTAACGGCGGTTACGCCAGCCTGATTGCCTGGTTACCCGCTTTCTATATTGAGATTGGTGCCAGCGCGCAGTACAGCGGTTCCTTACTGGCATTGATGACGCTTGGGCAAGCCGCAGGAGCTTTGCTGATGCCTGCTATGGCTCGCCATCAGGATCGGCGCAAACTGTTAATGCTGGCGCTGGTGTTACAACTGGTGGGGTTCTGCGGCTTTATCTGGCTGCCGATGCAATTGCCGGTATTGTGGGCGATGGTGTGTGGGTTAGGTCTGGGCGGCGCGTTTCCGCTCTGTTTGCTGCTGGCGCTCGATCACTCTGTGCAACCGGCTATTGCTGGCAAGCTGGTGGCGTTTATGCAGGGAATCGGTTTTATCATCGCCGGGCTTGCCCCGTGGTTTTCTGGCGTGCTGCGTAGTATCAGCGGCAATTACCTGATGGACTGGGCATTTCATGCGCTGTGCGTCGTTGGGCTGATGATCATAACCCTGCGTTTTGCACCAGTACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGA", + "dna_sequence_length": 1155, + "functions": [ + "putative cyanate transporter" + ], + "id": "CDS_338", + "location": [ + [ + "NC_000913", + 359992, + "+", + 1155 + ] + ], + "md5": "e601ba6224c6c3f57a4e8553a337f854", + "parent_gene": "", + "protein_md5": "a42e40018f599ba50d0fb8b46aa21621", + "protein_translation": "MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPVRFPQLWVKEA", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001177" + ], + [ + "gene_synonym", + "ECK0339" + ], + [ + "gene_synonym", + "EcoGene:EG10524" + ], + [ + "gene_synonym", + "GI:16128327" + ], + [ + "gene_synonym", + "GeneID:945674" + ], + [ + "gene_synonym", + "JW0333" + ], + [ + "gene_synonym", + "NP_414876.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07464" + ], + [ + "gene_synonym", + "b0342" + ], + [ + "gene_synonym", + "lacA" + ] + ], + "dna_sequence": "TTGAACATGCCAATGACCGAAAGAATAAGAGCAGGCAAGCTATTTACCGATATGTGCGAAGGCTTACCGGAAAAAAGACTTCGTGGGAAAACGTTAATGTATGAGTTTAATCACTCGCATCCATCAGAAGTTGAAAAAAGAGAAAGCCTGATTAAAGAAATGTTTGCCACGGTAGGGGAAAACGCCTGGGTAGAACCGCCTGTCTATTTCTCTTACGGTTCCAACATCCATATAGGCCGCAATTTTTATGCAAATTTCAATTTAACCATTGTCGATGACTACACGGTAACAATCGGTGATAACGTACTGATTGCACCCAACGTTACTCTTTCCGTTACGGGACACCCTGTACACCATGAATTGAGAAAAAACGGCGAGATGTACTCTTTTCCGATAACGATTGGCAATAACGTCTGGATCGGAAGTCATGTGGTTATTAATCCAGGCGTCACCATCGGGGATAATTCTGTTATTGGCGCGGGTAGTATCGTCACAAAAGACATTCCACCAAACGTCGTGGCGGCTGGCGTTCCTTGTCGGGTTATTCGCGAAATAAACGACCGGGATAAGCACTATTATTTCAAAGATTATAAAGTTGAATCGTCAGTTTAA", + "dna_sequence_length": 612, + "functions": [ + "thiogalactoside acetyltransferase" + ], + "id": "CDS_339", + "location": [ + [ + "NC_000913", + 361860, + "-", + 612 + ] + ], + "md5": "a3cc2cde2e4f55ddfe1d705f49823640", + "parent_gene": "", + "protein_md5": "e69827668fe7dbce00e651f828d1d5c7", + "protein_translation": "MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001181" + ], + [ + "gene_synonym", + "ECK0340" + ], + [ + "gene_synonym", + "EcoGene:EG10526" + ], + [ + "gene_synonym", + "GI:16128328" + ], + [ + "gene_synonym", + "GeneID:949083" + ], + [ + "gene_synonym", + "JW0334" + ], + [ + "gene_synonym", + "NP_414877.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02920" + ], + [ + "gene_synonym", + "b0343" + ], + [ + "gene_synonym", + "lacY" + ] + ], + "dna_sequence": "ATGTACTATTTAAAAAACACAAACTTTTGGATGTTCGGTTTATTCTTTTTCTTTTACTTTTTTATCATGGGAGCCTACTTCCCGTTTTTCCCGATTTGGCTACATGACATCAACCATATCAGCAAAAGTGATACGGGTATTATTTTTGCCGCTATTTCTCTGTTCTCGCTATTATTCCAACCGCTGTTTGGTCTGCTTTCTGACAAACTCGGGCTGCGCAAATACCTGCTGTGGATTATTACCGGCATGTTAGTGATGTTTGCGCCGTTCTTTATTTTTATCTTCGGGCCACTGTTACAATACAACATTTTAGTAGGATCGATTGTTGGTGGTATTTATCTAGGCTTTTGTTTTAACGCCGGTGCGCCAGCAGTAGAGGCATTTATTGAGAAAGTCAGCCGTCGCAGTAATTTCGAATTTGGTCGCGCGCGGATGTTTGGCTGTGTTGGCTGGGCGCTGTGTGCCTCGATTGTCGGCATCATGTTCACCATCAATAATCAGTTTGTTTTCTGGCTGGGCTCTGGCTGTGCACTCATCCTCGCCGTTTTACTCTTTTTCGCCAAAACGGATGCGCCCTCTTCTGCCACGGTTGCCAATGCGGTAGGTGCCAACCATTCGGCATTTAGCCTTAAGCTGGCACTGGAACTGTTCAGACAGCCAAAACTGTGGTTTTTGTCACTGTATGTTATTGGCGTTTCCTGCACCTACGATGTTTTTGACCAACAGTTTGCTAATTTCTTTACTTCGTTCTTTGCTACCGGTGAACAGGGTACGCGGGTATTTGGCTACGTAACGACAATGGGCGAATTACTTAACGCCTCGATTATGTTCTTTGCGCCACTGATCATTAATCGCATCGGTGGGAAAAACGCCCTGCTGCTGGCTGGCACTATTATGTCTGTACGTATTATTGGCTCATCGTTCGCCACCTCAGCGCTGGAAGTGGTTATTCTGAAAACGCTGCATATGTTTGAAGTACCGTTCCTGCTGGTGGGCTGCTTTAAATATATTACCAGCCAGTTTGAAGTGCGTTTTTCAGCGACGATTTATCTGGTCTGTTTCTGCTTCTTTAAGCAACTGGCGATGATTTTTATGTCTGTACTGGCGGGCAATATGTATGAAAGCATCGGTTTCCAGGGCGCTTATCTGGTGCTGGGTCTGGTGGCGCTGGGCTTCACCTTAATTTCCGTGTTCACGCTTAGCGGCCCCGGCCCGCTTTCCCTGCTGCGTCGTCAGGTGAATGAAGTCGCTTAA", + "dna_sequence_length": 1254, + "functions": [ + "lactose permease" + ], + "id": "CDS_340", + "location": [ + [ + "NC_000913", + 363179, + "-", + 1254 + ] + ], + "md5": "3370705655f849d924ba349c462bf4e4", + "parent_gene": "", + "protein_md5": "49f5aab847431e5b9d173eb0199e3347", + "protein_translation": "MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001183" + ], + [ + "gene_synonym", + "ECK0341" + ], + [ + "gene_synonym", + "EcoGene:EG10527" + ], + [ + "gene_synonym", + "GI:16128329" + ], + [ + "gene_synonym", + "GeneID:945006" + ], + [ + "gene_synonym", + "JW0335" + ], + [ + "gene_synonym", + "NP_414878.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00722" + ], + [ + "gene_synonym", + "b0344" + ], + [ + "gene_synonym", + "lacZ" + ] + ], + "dna_sequence": "ATGACCATGATTACGGATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCTTTGCCTGGTTTCCGGCACCAGAAGCGGTGCCGGAAAGCTGGCTGGAGTGCGATCTTCCTGAGGCCGATACTGTCGTCGTCCCCTCAAACTGGCAGATGCACGGTTACGATGCGCCCATCTACACCAACGTGACCTATCCCATTACGGTCAATCCGCCGTTTGTTCCCACGGAGAATCCGACGGGTTGTTACTCGCTCACATTTAATGTTGATGAAAGCTGGCTACAGGAAGGCCAGACGCGAATTATTTTTGATGGCGTTAACTCGGCGTTTCATCTGTGGTGCAACGGGCGCTGGGTCGGTTACGGCCAGGACAGTCGTTTGCCGTCTGAATTTGACCTGAGCGCATTTTTACGCGCCGGAGAAAACCGCCTCGCGGTGATGGTGCTGCGCTGGAGTGACGGCAGTTATCTGGAAGATCAGGATATGTGGCGGATGAGCGGCATTTTCCGTGACGTCTCGTTGCTGCATAAACCGACTACACAAATCAGCGATTTCCATGTTGCCACTCGCTTTAATGATGATTTCAGCCGCGCTGTACTGGAGGCTGAAGTTCAGATGTGCGGCGAGTTGCGTGACTACCTACGGGTAACAGTTTCTTTATGGCAGGGTGAAACGCAGGTCGCCAGCGGCACCGCGCCTTTCGGCGGTGAAATTATCGATGAGCGTGGTGGTTATGCCGATCGCGTCACACTACGTCTGAACGTCGAAAACCCGAAACTGTGGAGCGCCGAAATCCCGAATCTCTATCGTGCGGTGGTTGAACTGCACACCGCCGACGGCACGCTGATTGAAGCAGAAGCCTGCGATGTCGGTTTCCGCGAGGTGCGGATTGAAAATGGTCTGCTGCTGCTGAACGGCAAGCCGTTGCTGATTCGAGGCGTTAACCGTCACGAGCATCATCCTCTGCATGGTCAGGTCATGGATGAGCAGACGATGGTGCAGGATATCCTGCTGATGAAGCAGAACAACTTTAACGCCGTGCGCTGTTCGCATTATCCGAACCATCCGCTGTGGTACACGCTGTGCGACCGCTACGGCCTGTATGTGGTGGATGAAGCCAATATTGAAACCCACGGCATGGTGCCAATGAATCGTCTGACCGATGATCCGCGCTGGCTACCGGCGATGAGCGAACGCGTAACGCGAATGGTGCAGCGCGATCGTAATCACCCGAGTGTGATCATCTGGTCGCTGGGGAATGAATCAGGCCACGGCGCTAATCACGACGCGCTGTATCGCTGGATCAAATCTGTCGATCCTTCCCGCCCGGTGCAGTATGAAGGCGGCGGAGCCGACACCACGGCCACCGATATTATTTGCCCGATGTACGCGCGCGTGGATGAAGACCAGCCCTTCCCGGCTGTGCCGAAATGGTCCATCAAAAAATGGCTTTCGCTACCTGGAGAGACGCGCCCGCTGATCCTTTGCGAATACGCCCACGCGATGGGTAACAGTCTTGGCGGTTTCGCTAAATACTGGCAGGCGTTTCGTCAGTATCCCCGTTTACAGGGCGGCTTCGTCTGGGACTGGGTGGATCAGTCGCTGATTAAATATGATGAAAACGGCAACCCGTGGTCGGCTTACGGCGGTGATTTTGGCGATACGCCGAACGATCGCCAGTTCTGTATGAACGGTCTGGTCTTTGCCGACCGCACGCCGCATCCAGCGCTGACGGAAGCAAAACACCAGCAGCAGTTTTTCCAGTTCCGTTTATCCGGGCAAACCATCGAAGTGACCAGCGAATACCTGTTCCGTCATAGCGATAACGAGCTCCTGCACTGGATGGTGGCGCTGGATGGTAAGCCGCTGGCAAGCGGTGAAGTGCCTCTGGATGTCGCTCCACAAGGTAAACAGTTGATTGAACTGCCTGAACTACCGCAGCCGGAGAGCGCCGGGCAACTCTGGCTCACAGTACGCGTAGTGCAACCGAACGCGACCGCATGGTCAGAAGCCGGGCACATCAGCGCCTGGCAGCAGTGGCGTCTGGCGGAAAACCTCAGTGTGACGCTCCCCGCCGCGTCCCACGCCATCCCGCATCTGACCACCAGCGAAATGGATTTTTGCATCGAGCTGGGTAATAAGCGTTGGCAATTTAACCGCCAGTCAGGCTTTCTTTCACAGATGTGGATTGGCGATAAAAAACAACTGCTGACGCCGCTGCGCGATCAGTTCACCCGTGCACCGCTGGATAACGACATTGGCGTAAGTGAAGCGACCCGCATTGACCCTAACGCCTGGGTCGAACGCTGGAAGGCGGCGGGCCATTACCAGGCCGAAGCAGCGTTGTTGCAGTGCACGGCAGATACACTTGCTGATGCGGTGCTGATTACGACCGCTCACGCGTGGCAGCATCAGGGGAAAACCTTATTTATCAGCCGGAAAACCTACCGGATTGATGGTAGTGGTCAAATGGCGATTACCGTTGATGTTGAAGTGGCGAGCGATACACCGCATCCGGCGCGGATTGGCCTGAACTGCCAGCTGGCGCAGGTAGCAGAGCGGGTAAACTGGCTCGGATTAGGGCCGCAAGAAAACTATCCCGACCGCCTTACTGCCGCCTGTTTTGACCGCTGGGATCTGCCATTGTCAGACATGTATACCCCGTACGTCTTCCCGAGCGAAAACGGTCTGCGCTGCGGGACGCGCGAATTGAATTATGGCCCACACCAGTGGCGCGGCGACTTCCAGTTCAACATCAGCCGCTACAGTCAACAGCAACTGATGGAAACCAGCCATCGCCATCTGCTGCACGCGGAAGAAGGCACATGGCTGAATATCGACGGTTTCCATATGGGGATTGGTGGCGACGACTCCTGGAGCCCGTCAGTATCGGCGGAATTCCAGCTGAGCGCCGGTCGCTACCATTACCAGTTGGTCTGGTGTCAAAAATAA", + "dna_sequence_length": 3075, + "functions": [ + "beta-D-galactosidase" + ], + "id": "CDS_341", + "location": [ + [ + "NC_000913", + 366305, + "-", + 3075 + ] + ], + "md5": "1852d4b74ebd175d16835f2ec404e67e", + "parent_gene": "", + "protein_md5": "61d924523cd4bd0dbab1985e54f1f401", + "protein_translation": "MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK", + "protein_translation_length": 1024, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001189" + ], + [ + "gene_synonym", + "ECK0342" + ], + [ + "gene_synonym", + "EcoGene:EG10525" + ], + [ + "gene_synonym", + "GI:49176012" + ], + [ + "gene_synonym", + "GeneID:945007" + ], + [ + "gene_synonym", + "JW0336" + ], + [ + "gene_synonym", + "NP_414879.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03023" + ], + [ + "gene_synonym", + "b0345" + ], + [ + "gene_synonym", + "lacI" + ] + ], + "dna_sequence": "GTGAAACCAGTAACGTTATACGATGTCGCAGAGTATGCCGGTGTCTCTTATCAGACCGTTTCCCGCGTGGTGAACCAGGCCAGCCACGTTTCTGCGAAAACGCGGGAAAAAGTGGAAGCGGCGATGGCGGAGCTGAATTACATTCCCAACCGCGTGGCACAACAACTGGCGGGCAAACAGTCGTTGCTGATTGGCGTTGCCACCTCCAGTCTGGCCCTGCACGCGCCGTCGCAAATTGTCGCGGCGATTAAATCTCGCGCCGATCAACTGGGTGCCAGCGTGGTGGTGTCGATGGTAGAACGAAGCGGCGTCGAAGCCTGTAAAGCGGCGGTGCACAATCTTCTCGCGCAACGCGTCAGTGGGCTGATCATTAACTATCCGCTGGATGACCAGGATGCCATTGCTGTGGAAGCTGCCTGCACTAATGTTCCGGCGTTATTTCTTGATGTCTCTGACCAGACACCCATCAACAGTATTATTTTCTCCCATGAAGACGGTACGCGACTGGGCGTGGAGCATCTGGTCGCATTGGGTCACCAGCAAATCGCGCTGTTAGCGGGCCCATTAAGTTCTGTCTCGGCGCGTCTGCGTCTGGCTGGCTGGCATAAATATCTCACTCGCAATCAAATTCAGCCGATAGCGGAACGGGAAGGCGACTGGAGTGCCATGTCCGGTTTTCAACAAACCATGCAAATGCTGAATGAGGGCATCGTTCCCACTGCGATGCTGGTTGCCAACGATCAGATGGCGCTGGGCGCAATGCGCGCCATTACCGAGTCCGGGCTGCGCGTTGGTGCGGATATCTCGGTAGTGGGATACGACGATACCGAAGACAGCTCATGTTATATCCCGCCGTTAACCACCATCAAACAGGATTTTCGCCTGCTGGGGCAAACCAGCGTGGACCGCTTGCTGCAACTCTCTCAGGGCCAGGCGGTGAAGGGCAATCAGCTGTTGCCCGTCTCACTGGTGAAAAGAAAAACCACCCTGGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGA", + "dna_sequence_length": 1083, + "functions": [ + "lactose-inducible lac operon transcriptional repressor" + ], + "id": "CDS_342", + "location": [ + [ + "NC_000913", + 367510, + "-", + 1083 + ] + ], + "md5": "570baece468ba4bca65537e88a368dcd", + "parent_gene": "", + "protein_md5": "228e7a41278dfe231a49f0de7c32ff11", + "protein_translation": "MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ", + "protein_translation_length": 360, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001191" + ], + [ + "gene_synonym", + "ECK0343" + ], + [ + "gene_synonym", + "EcoGene:EG20276" + ], + [ + "gene_synonym", + "GI:145698223" + ], + [ + "gene_synonym", + "GeneID:945938" + ], + [ + "gene_synonym", + "JW0337" + ], + [ + "gene_synonym", + "NP_414880.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77569" + ], + [ + "gene_synonym", + "b0346" + ], + [ + "gene_synonym", + "mhpR" + ] + ], + "dna_sequence": "ATGCAGAACAATGAGCAGACGGAATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTCGGGCTGCTGGCGGAACTCAGCGGCCTGCATCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCGTAGCCCCTCCGATGATAGTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGACGAACAGTGGATTTCTGCACTGGCGGCCCCACTGCTGGGCGATCTGTTGCGCGAAGTGGTATGGCCGACAGATGTGTCCACGCTGGATGTTGATGCAATGGTGGTACGCGAAACCACTCACCGTTTCAGCCGCTTATCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGCCTCGGGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGATGACTATCAACTGGCACGGGAACCGTTAAAGCTGGAAGCCATTCTGGCGCGCGCGCGCAAAGAGGGTTACGGACAGAACTACCGCGGCTGGGATCAGGAGGAGAAGATCGCCTCTATCGCCGTACCGCTGCGCAGTGAACAACGGGTGATTGGCTGTCTGAATCTGGTGTATATGGCGAGCGCAATGACCATTGAACAGGCAGCGGAAAAGCATCTTCCGGCGCTACAACGGGTAGCAAAACAGATCGAAGAAGGGGTTGAATCGCAGGCTATTCTGGTGGCCGGAAGGCGAAGCGGCATGCATTTACGTTGA", + "dna_sequence_length": 834, + "functions": [ + "mhp operon transcriptional activator" + ], + "id": "CDS_343", + "location": [ + [ + "NC_000913", + 368420, + "-", + 834 + ] + ], + "md5": "784ae742cb0f575be5bd3c22673458b5", + "parent_gene": "", + "protein_md5": "62040962c3fe17fc1c7f7539ddf2f4d3", + "protein_translation": "MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRKELIEMLASRPGDDYQLAREPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGMHLR", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001196" + ], + [ + "gene_synonym", + "ECK0344" + ], + [ + "gene_synonym", + "EcoGene:EG20273" + ], + [ + "gene_synonym", + "GI:16128332" + ], + [ + "gene_synonym", + "GeneID:945197" + ], + [ + "gene_synonym", + "JW0338" + ], + [ + "gene_synonym", + "NP_414881.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77397" + ], + [ + "gene_synonym", + "b0347" + ], + [ + "gene_synonym", + "mhpA" + ] + ], + "dna_sequence": "ATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCGACTACCCGCGTGCGATTGGTATTGATGACGAGGCGCTGCGCACCATGCAGTCGGTCGGCCTGGTCGATGATGTTCTGCCGCACACTACGCCGTGGCACGCGATGCGTTTTCTCACCCCGAAAGGCCGCTGTTTTGCTGATATTCAGCCAATGACCGATGAATTTGGCTGGCCGCGCCGTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGAAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGATTGTGGTAGATATCGCCAACGATCCGTTAAGTACGCCGCATATCTATTTGTGTTGCGATCCGGTGCGCCCGTATGTTTCTGCCGCGCTGCCTCATGCGGTACGTCGCTTTGAATTTATGGTGATGCCGGGAGAAACCGAAGAGCAGCTGCGTGAGCCGCAAAATATGCGCAAGCTGTTAAGCAAAGTGCTGCCTAATCCGGACAATGTTGAATTGATTCGCCAGCGTGTCTACACCCACAACGCGCGACTGGCGCAACGTTTCCGTATTGATCGCGTACTGCTGGCGGGCGATGCCGCGCACATCATGCCGGTATGGCAGGGGCAGGGCTATAACAGTGGTATGCGCGACGCCTTTAACCTCGCATGGAAACTGGCGTTGGTTATCCAGGGGAAAGCCCGCGATGCGCTGCTCGATACCTATCAACAAGAACGTCGCGATCACGCCAAAGCGATGATTGACCTGTCCGTGACGGCGGGCAACGTGCTGGCTCCGCCGAAACGCTGGCAGGGTACGTTACGTGACGGCGTTTCCTGGCTGTTGAATTATCTGCCGCCAGTAAAACGCTACTTCCTCGAAATGCGCTTCAAGCCGATGCCGCAATATTACGGCGGTGCGCTGATGCGTGAGGGCGAAGCGAAGCACTCTCCGGTCGGCAAGATGTTTATTCAGCCGAAAGTCACGCTGGAAAACGGCGACGTGACGCTGCTCGATAACGCGATCGGCGCGAACTTCGCGGTAATTGGCTGGGGATGCAATCCACTGTGGGGGATGAGCGACGAGCAAATCCAGCAGTGGCGCGCGTTGGGCACACGCTTCATTCAGGTGGTGCCGGAAGTGCAAATTCATACCGCACAGGATAACCACGACGGCGTACTACGCGTGGGCGATACGCAAGGTCGCCTGCGTAGCTGGTTCGCGCAACACAATGCTTCGCTGGTGGTGATGCGCCCGGATCGCTTTGTTGCCGCCACCGCCATTCCGCAAACCCTGGGCAAGACCCTGAATAAACTGGCGTCGGTGATGACGCTGACCCGCCCTGATGCCGACGTTTCTGTCGAAAAGGTAGCCTGA", + "dna_sequence_length": 1665, + "functions": [ + "3-(3-hydroxyphenyl)propionate hydroxylase" + ], + "id": "CDS_344", + "location": [ + [ + "NC_000913", + 368611, + "+", + 1665 + ] + ], + "md5": "16f8a15c493e01fa0cb99088108da645", + "parent_gene": "", + "protein_md5": "066f75165e952fb244545cc08873bf22", + "protein_translation": "MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWPRRNAFIQPQVDAVMLEGVSRFPNVRCLFSRELEAFSQQDDEVTLHLKTAEGQREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDPVRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYTHNARLAQRFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDALLDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWLLNYLPPVKRYFLEMRFKPMPQYYGGALMREGEAKHSPVGKMFIQPKVTLENGDVTLLDNAIGANFAVIGWGCNPLWGMSDEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLRVGDTQGRLRSWFAQHNASLVVMRPDRFVAATAIPQTLGKTLNKLASVMTLTRPDADVSVEKVA", + "protein_translation_length": 554, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001198" + ], + [ + "gene_synonym", + "ECK0345" + ], + [ + "gene_synonym", + "EcoGene:EG20274" + ], + [ + "gene_synonym", + "GI:16128333" + ], + [ + "gene_synonym", + "GeneID:945047" + ], + [ + "gene_synonym", + "JW0339" + ], + [ + "gene_synonym", + "NP_414882.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABR9" + ], + [ + "gene_synonym", + "b0348" + ], + [ + "gene_synonym", + "mhpB" + ] + ], + "dna_sequence": "ATGCACGCTTATCTTCACTGTCTTTCCCACTCGCCGCTGGTGGGGTATGTCGACCCGGCGCAAGAGGTGCTCGATGAGGTCAATGGCGTGATTGCCAGCGCCCGCGAGCGTATTGCGGCATTCTCCCCTGAACTGGTGGTGCTGTTTGCGCCAGATCACTACAACGGCTTTTTCTATGACGTGATGCCACCGTTCTGTTTAGGCGTTGGAGCGACGGCAATTGGTGATTTCGGCAGTGCGGCAGGAGAGCTGCCCGTGCCTGTGGAGCTGGCGGAGGCCTGTGCGCATGCCGTCATGAAGAGCGGGATCGATCTTGCCGTTTCTTACTGTATGCAGGTGGACCACGGGTTCGCCCAGCCGCTGGAGTTCCTGCTCGGTGGGCTGGATAAGGTGCCAGTTCTGCCTGTGTTCATCAACGGTGTCGCCACGCCGCTGCCCGGTTTCCAGCGTACCCGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTTCCCATCAGCCGCCGGTGCCCGAACTGGCGAAAGCCGATGCCCATATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGACGCATACAGGAACTGGATGCCGTCAGTAACGAAGAGCTTTCCGCCATTGCCGGAAAGTCGACACATGAAATCAAAACCTGGGTCGCCGCTTTTGCCGCTATTTCTGCGTTTGGCAACTGGCGTAGCGAAGGGCGTTATTACCGCCCAATCCCGGAGTGGATTGCCGGATTTGGCTCGTTAAGCGCCAGAACAGAGAACTGA", + "dna_sequence_length": 945, + "functions": [ + "2,3-dihydroxyphenylpropionate 1,2-dioxygenase" + ], + "id": "CDS_345", + "location": [ + [ + "NC_000913", + 370277, + "+", + 945 + ] + ], + "md5": "f4870f2d857cf429362d1d8c4fe37bca", + "parent_gene": "", + "protein_md5": "2932d3b4e9fdac8bc4bfe81ba6c920bd", + "protein_translation": "MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001201" + ], + [ + "gene_synonym", + "ECK0346" + ], + [ + "gene_synonym", + "EcoGene:EG20275" + ], + [ + "gene_synonym", + "GI:459201369" + ], + [ + "gene_synonym", + "GeneID:944954" + ], + [ + "gene_synonym", + "JW0340" + ], + [ + "gene_synonym", + "NP_414883.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77044" + ], + [ + "gene_synonym", + "b0349" + ], + [ + "gene_synonym", + "mhpC" + ] + ], + "dna_sequence": "ATGAGTTATCAGCCACAAACCGAAGCCGCCACCAGCCGTTTTCTGAATGTAGAAGAAGCGGGTAAAACGCTGCGCATCCATTTTAATGACTGCGGACAAGGCGACGAAACCGTTGTCCTGCTGCATGGTTCCGGCCCGGGTGCTACTGGCTGGGCGAACTTCAGCCGCAATATCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCATTGCCGGTTCTGAACTGCATATCTTCCGCGACTGTGGTCACTGGGCGCAGTGGGAACATGCCGACGCTTTCAATCAACTGGTGCTGAATTTCCTCGCACGCCCTTAA", + "dna_sequence_length": 867, + "functions": [ + "2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" + ], + "id": "CDS_346", + "location": [ + [ + "NC_000913", + 371239, + "+", + 867 + ] + ], + "md5": "5ca398faf3ca0051fbaf1278e4656765", + "parent_gene": "", + "protein_md5": "5f8f757095f99040f2af355c661c350a", + "protein_translation": "MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLARP", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001205" + ], + [ + "gene_synonym", + "ECK0347" + ], + [ + "gene_synonym", + "EcoGene:EG14274" + ], + [ + "gene_synonym", + "GI:90111116" + ], + [ + "gene_synonym", + "GeneID:944768" + ], + [ + "gene_synonym", + "JW0341" + ], + [ + "gene_synonym", + "NP_414884.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77608" + ], + [ + "gene_synonym", + "b0350" + ], + [ + "gene_synonym", + "mhpD" + ], + [ + "gene_synonym", + "mhpS" + ] + ], + "dna_sequence": "ATGACGAAGCATACTCTTGAGCAACTGGCGGCGGATTTACGCCGCGCCGCAGAGCAGGGCGAAGCGATTGCACCGCTGCGCGATCTGATTGGTATCGATAACGCTGAAGCGGCTTACGCCATTCAGCACATAAATGTGCAACATGACGTTGCGCAGGGGCGTCGCGTGGTAGGGCGTAAAGTGGGCCTGACACATCCGAAAGTGCAACAACAACTGGGCGTTGATCAACCGGATTTTGGGACGTTATTTGCCGACATGTGTTATGGCGATAACGAAATCATTCCTTTTTCCCGTGTTCTGCAACCCCGCATTGAAGCGGAGATCGCACTGGTGTTGAACCGCGATTTGCCCGCAACCGATATCACCTTCGACGAATTGTATAACGCCATTGAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGA", + "dna_sequence_length": 810, + "functions": [ + "2-keto-4-pentenoate hydratase" + ], + "id": "CDS_347", + "location": [ + [ + "NC_000913", + 372115, + "+", + 810 + ] + ], + "md5": "4521c523ab1522dae841ce7daf0c7e0a", + "parent_gene": "", + "protein_md5": "da10eaa6e06640558dea3773f0f7dd3c", + "protein_translation": "MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001207" + ], + [ + "gene_synonym", + "ECK0348" + ], + [ + "gene_synonym", + "EcoGene:EG13625" + ], + [ + "gene_synonym", + "GI:16128336" + ], + [ + "gene_synonym", + "GeneID:945008" + ], + [ + "gene_synonym", + "JW0342" + ], + [ + "gene_synonym", + "NP_414885.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77580" + ], + [ + "gene_synonym", + "b0351" + ], + [ + "gene_synonym", + "mhpF" + ] + ], + "dna_sequence": "ATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCACGGTCAGCATCTGGAGATGGCGGTGATGGTTGGCATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGACGTATGGGCGTCGCCACCACCCATGAAGGGGTGATCGGACTGATGAACATGCCTGAATTTGCTGATATCGACATTGTATTTGATGCGACCAGCGCCGGTGCTCATGTGAAAAACGATGCCGCTTTACGCGAAGCGAAACCGGATATTCGCTTAATTGACCTGACGCCTGCTGCCATCGGCCCTTACTGCGTGCCGGTGGTTAACCTCGAGGCGAACGTCGATCAACTGAACGTCAACATGGTCACCTGCGGCGGCCAGGCCACCATTCCAATGGTGGCGGCAGTTTCACGCGTGGCGCGTGTTCATTACGCCGAAATTATCGCTTCTATCGCCAGTAAATCTGCCGGACCTGGCACGCGTGCCAATATCGATGAATTTACGGAAACCACTTCCCGAGCCATTGAAGTGGTGGGCGGCGCGGCAAAAGGGAAGGCGATTATTGTGCTTAACCCAGCAGAGCCACCGTTGATGATGCGTGACACGGTGTATGTATTGAGCGACGAAGCTTCACAAGATGATATCGAAGCCTCAATCAATGAAATGGCTGAGGCGGTGCAGGCTTACGTACCGGGTTATCGCCTGAAACAGCGCGTGCAGTTTGAAGTTATCCCGCAGGATAAACCGGTCAATTTACCGGGCGTGGGGCAATTCTCCGGACTGAAAACAGCGGTCTGGCTGGAAGTCGAAGGCGCAGCGCATTATCTGCCTGCCTATGCGGGCAACCTCGACATTATGACTTCCAGTGCGCTGGCGACAGCGGAAAAAATGGCCCAGTCACTGGCGCGCAAGGCAGGAGAAGCGGCATGA", + "dna_sequence_length": 951, + "functions": [ + "acetaldehyde-CoA dehydrogenase II, NAD-binding" + ], + "id": "CDS_348", + "location": [ + [ + "NC_000913", + 372921, + "+", + 951 + ] + ], + "md5": "a64ea9612d6a4ee997b390aae12ec0b3", + "parent_gene": "", + "protein_md5": "2cfc807776cae4addcaafe7630a822e3", + "protein_translation": "MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDLTPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIASKSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEASQDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEVEGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAGEAA", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001209" + ], + [ + "gene_synonym", + "ECK0349" + ], + [ + "gene_synonym", + "EcoGene:EG13292" + ], + [ + "gene_synonym", + "GI:16128337" + ], + [ + "gene_synonym", + "GeneID:945012" + ], + [ + "gene_synonym", + "JW0343" + ], + [ + "gene_synonym", + "NP_414886.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P51020" + ], + [ + "gene_synonym", + "b0352" + ], + [ + "gene_synonym", + "mhpE" + ] + ], + "dna_sequence": "ATGAACGGTAAAAAACTTTATATCTCGGACGTCACATTGCGTGACGGTATGCACGCCATTCGTCATCAGTATTCGCTGGAAAACGTTCGCCAGATTGCCAAAGCACTGGACGATGCCCGCGTGGATTCGATTGAAGTGGCCCACGGCGACGGTTTGCAAGGTTCCAGCTTTAACTATGGTTTCGGCGCACATAGCGACCTTGAATGGATTGAAGCGGCGGCGGATGTGGTGAAGCACGCCAAAATCGCGACGTTGTTGCTGCCAGGAATCGGCACTATTCACGATCTGAAAAATGCCTGGCAGGCTGGCGCGCGGGTGGTTCGTGTGGCAACGCACTGTACCGAAGCTGATGTTTCCGCCCAGCATATTCAGTATGCCCGCGAGCTCGGAATGGACACCGTTGGTTTTCTGATGATGAGCCATATGACCACGCCGGAGAATCTCGCCAAGCAGGCAAAGCTGATGGAAGGCTACGGTGCGACCTGTATTTATGTGGTGGATTCTGGCGGTGCGATGAACATGAGCGATATCCGTGACCGTTTCCGCGCCCTGAAAGCAGAGCTGAAACCAGAAACGCAAACTGGCATGCACGCTCACCATAACCTGAGTCTTGGCGTGGCGAACTCTATCGCGGCGGTGGAAGAGGGCTGCGACCGAATCGACGCCAGCCTCGCGGGAATGGGCGCGGGCGCAGGTAACGCACCGCTGGAAGTGTTTATTGCCGCCGCGGATAAACTGGGCTGGCAGCATGGGACCGATCTCTATGCGTTAATGGATGCCGCCGACGACCTGGTGCGTCCGTTGCAGGATCGACCGGTACGAGTCGATCGCGAAACGCTGGCGCTGGGATACGCTGGTGTTTACTCGAGCTTCCTGCGTCACTGTGAAACGGCGGCGGCGCGTTATGGCTTAAGTGCGGTGGATATTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAA", + "dna_sequence_length": 1014, + "functions": [ + "4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I" + ], + "id": "CDS_349", + "location": [ + [ + "NC_000913", + 373868, + "+", + 1014 + ] + ], + "md5": "d7620dfde64a231111445b05ad5132df", + "parent_gene": "", + "protein_md5": "0cecdc75cde2708ed60a5ea482fa9481", + "protein_translation": "MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQAGARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVDRETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLRNNK", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001213" + ], + [ + "gene_synonym", + "ECK0350" + ], + [ + "gene_synonym", + "EcoGene:EG13293" + ], + [ + "gene_synonym", + "GI:90111117" + ], + [ + "gene_synonym", + "GeneID:944997" + ], + [ + "gene_synonym", + "JW5046" + ], + [ + "gene_synonym", + "NP_414887.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77589" + ], + [ + "gene_synonym", + "b0353" + ], + [ + "gene_synonym", + "mhpT" + ], + [ + "gene_synonym", + "yaiK" + ] + ], + "dna_sequence": "ATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCGTTGGTTGGCGGAATGCTGGCGGACCGTTATGGTCGCAAGCGCATTTTGATTGGCTCAGTTGCGCTGTTTGGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGTTTTCGTGGGACGGCAGTGAGCCTGATGTATTGCGGTGTTCCCATTGGCGCGGCGCTGGCGGCGACACTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAACGGTGTTTTGGGTAGGTGGTGTGGTGCCGTTGATTCTGGTGCCGCTATTAATGCGCTGGCTGCCGGAGTCGGCGGTTTTCGCTGGCGAAAAACAGTCTGCGCCACCACTGCGTGCCTTATTTGCGCCAGAAACGGCAACCGCGACGCTGCTGCTGTGGTTGTGTTATTTCTTCACTCTGCTGGTGGTCTACATGTTGATCAACTGGCTACCGCTACTTTTGGTGGAGCAAGGATTCCAGCCATCGCAGGCGGCAGGGGTGATGTTTGCCCTGCAAATGGGGGCGGCAAGCGGGACGTTAATGTTGGGCGCATTGATGGATAAGCTGCGTCCAGTAACCATGTCGCTACTGATTTATAGCGGCATGTTAGCTTCGCTGCTGGCGCTTGGAACGGTGTCGTCATTTAACGGTATGTTGCTGGCGGGATTTGTCGCGGGGTTGTTTGCGACAGGTGGGCAAAGCGTTTTGTATGCCCTGGCACCGTTGTTTTACAGTTCGCAGATCCGCGCAACAGGTGTGGGAACAGCCGTGGCGGTAGGGCGTCTGGGGGCTATGAGCGGTCCGTTACTGGCCGGGAAAATGCTGGCATTAGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGA", + "dna_sequence_length": 1212, + "functions": [ + "3-hydroxyphenylpropionic transporter" + ], + "id": "CDS_350", + "location": [ + [ + "NC_000913", + 375459, + "+", + 1212 + ] + ], + "md5": "139f39b9e4a63e1b7a20864957632921", + "parent_gene": "", + "protein_md5": "ab766e9497b798f419ef5e1f538a552e", + "protein_translation": "MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQAFALDKMQMGWIFSAGILGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWDFPSLVFARLMTGVGLGAALPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGFAGANLAWQTVFWVGGVVPLILVPLLMRWLPESAVFAGEKQSAPPLRALFAPETATATLLLWLCYFFTLLVVYMLINWLPLLLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDKLRPVTMSLLIYSGMLASLLALGTVSSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSSQIRATGVGTAVAVGRLGAMSGPLLAGKMLALGTGTVGVMAASAPGILVAGLAVFILMSRRSRIQPCADA", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001216" + ], + [ + "gene_synonym", + "ECK0351" + ], + [ + "gene_synonym", + "EcoGene:EG13294" + ], + [ + "gene_synonym", + "GI:90111118" + ], + [ + "gene_synonym", + "GeneID:944993" + ], + [ + "gene_synonym", + "JW0345" + ], + [ + "gene_synonym", + "NP_414888.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P51024" + ], + [ + "gene_synonym", + "b0354" + ], + [ + "gene_synonym", + "yaiL" + ] + ], + "dna_sequence": "ATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAGCAGGATTAGTCACCAGCAAAAAAGCGGCGAAGGTGGAGAGAACGGCGAAAAAATCGCGCGTTCAGGCGCGTGAAGCTCGGGCGGCGGTAGAAGAAAATAAAAAGGCACAGCTTGAGCGTGATAAACAGCTTAGCGAACAGCAAAAACAAGCGGCGTTGGCGAAAGAATATAAAGCTCAGGTGAAGCAGCTTATTGAAATGAACCGAATCACCATTGCCAATGGCGATATTGGTTTTAACTTCACTGACGGCAATCTGATTAAGAAGATTTTTGTCGATAAGCTCACACAGGCGCAGTTGATTAATGGTCGTCTGGCGATTGCCCGCTTGTTGGTCGATAACAATAGCGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAA", + "dna_sequence_length": 540, + "functions": [ + "DUF2058 family protein" + ], + "id": "CDS_351", + "location": [ + [ + "NC_000913", + 376772, + "+", + 540 + ] + ], + "md5": "4cecc1653aa8a773efb55e881026f348", + "parent_gene": "", + "protein_md5": "bcbd4cdb0268ca8a2c022422865ad231", + "protein_translation": "MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEENKKAQLERDKQLSEQQKQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIARLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001219" + ], + [ + "gene_synonym", + "ECK0352" + ], + [ + "gene_synonym", + "EcoGene:EG13295" + ], + [ + "gene_synonym", + "GI:16128340" + ], + [ + "gene_synonym", + "GeneID:944991" + ], + [ + "gene_synonym", + "JW0346" + ], + [ + "gene_synonym", + "NP_414889.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P51025" + ], + [ + "gene_synonym", + "b0355" + ], + [ + "gene_synonym", + "frmB" + ], + [ + "gene_synonym", + "yaiM" + ] + ], + "dna_sequence": "ATGGAACTCATTGAAAAACATGTCAGCTTTGGCGGCTGGCAAAATATGTATCGGCATTATTCCCAATCACTGAAATGTGAAATGAATGTCGGCGTCTATCTCCCACCAAAAGCCGCGAATGAAAAATTGCCGGTGCTGTACTGGCTTTCAGGCCTGACCTGCAACGAGCAGAATTTCATTACTAAATCGGGGATGCAGCGTTACGCGGCTGAGCACAACATTATTGTTGTTGCGCCGGACACCAGTCCGCGAGGCAGTCATGTCGCAGATGCTGACCGTTACGATCTCGGGCAAGGTGCCGGGTTTTACCTGAACGCGACGCAAGCGCCGTGGAATGAACATTACAAAATGTATGACTATATCCGCAACGAGCTGCCGGATTTAGTGATGCATCATTTTCCGGCAACGGCCAAAAAGTCTATCTCTGGTCATTCTATGGGCGGGCTGGGCGCGCTGGTGCTGGCGTTACGTAACCCAGATGAATATGTCAGCGTCTCGGCGTTTTCGCCCATTGTCTCCCCATCGCAAGTGCCGTGGGGACAGCAAGCCTTTGCTGCATATCTTGCTGAAAATAAAGATGCCTGGTTGGATTACGACCCGGTGAGTCTTATTTCACAAGGTCAACGCGTTGCGGAAATCATGGTTGATCAGGGGTTGAGTGATGATTTTTACGCAGAACAGCTGCGGACTCCAAATCTTGAAAAGATCTGCCAGGAGATGAATATCAAGACGTTAATCCGTTATCACGAGGGTTATGATCACAGCTATTATTTTGTCTCCAGTTTTATTGGCGAGCATATTGCCTACCACGCCAATAAACTGAATATGCGTTGA", + "dna_sequence_length": 834, + "functions": [ + "S-formylglutathione hydrolase" + ], + "id": "CDS_352", + "location": [ + [ + "NC_000913", + 378368, + "-", + 834 + ] + ], + "md5": "89395584e723e09413c7e86c00169bc4", + "parent_gene": "", + "protein_md5": "c905e1b4cfcc2dc8517c90d0ae8e241c", + "protein_translation": "MELIEKHVSFGGWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001221" + ], + [ + "gene_synonym", + "ECK0353" + ], + [ + "gene_synonym", + "EcoGene:EG50010" + ], + [ + "gene_synonym", + "GI:16128341" + ], + [ + "gene_synonym", + "GeneID:944988" + ], + [ + "gene_synonym", + "JW0347" + ], + [ + "gene_synonym", + "NP_414890.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25437" + ], + [ + "gene_synonym", + "adhC" + ], + [ + "gene_synonym", + "b0356" + ], + [ + "gene_synonym", + "frmA" + ] + ], + "dna_sequence": "ATGAAATCACGTGCTGCCGTTGCATTTGCTCCCGGTAAACCGCTGGAAATCGTTGAAATTGACGTTGCACCACCGAAAAAAGGTGAAGTGCTAATTAAAGTCACCCATACCGGCGTTTGCCATACCGACGCATTTACCCTCTCCGGCGATGACCCGGAAGGTGTATTCCCGGTGGTTCTCGGTCACGAAGGGGCCGGCGTTGTGGTTGAAGTCGGTGAAGGCGTAACCAGCGTCAAACCTGGCGACCATGTGATCCCGCTTTACACCGCGGAGTGCGGCGAGTGTGAGTTCTGTCGTTCTGGCAAAACTAACCTCTGTGTTGCGGTTCGCGAAACCCAGGGTAAAGGCCTGATGCCAGACGGCACCACCCGTTTTTCTTACAACGGGCAGCCGCTTTATCACTACATGGGGTGCTCTACATTCAGTGAATACACCGTAGTCGCGGAAGTGTCTCTGGCAAAAATTAATCCAGAAGCAAACCATGAACACGTCTGCCTGCTGGGCTGTGGCGTGACCACCGGTATTGGCGCGGTACACAACACAGCTAAAGTCCAGCCAGGTGATTCTGTTGCCGTGTTTGGTCTTGGCGCGATTGGTCTGGCAGTGGTTCAGGGCGCGCGTCAGGCGAAAGCGGGTCGGATTATCGCTATCGATACCAACCCGAAGAAATTCGATCTGGCGCGTCGCTTCGGTGCTACCGACTGCATTAACCCGAATGACTACGACAAACCGATAAAAGATGTCCTGTTGGATATCAACAAATGGGGTATCGACCATACCTTTGAATGCATCGGTAACGTCAACGTGATGCGTGCGGCGCTGGAAAGTGCGCACCGCGGCTGGGGTCAGTCGGTGATCATCGGGGTCGCGGTTGCCGGTCAGGAAATCTCCACCCGTCCATTCCAGTTGGTCACTGGTCGCGTATGGAAAGGTTCCGCGTTTGGCGGCGTGAAAGGTCGTTCCCAGTTACCGGGCATGGTTGAAGATGCGATGAAAGGTGATATCGATCTGGAACCGTTTGTCACGCATACCATGAGCCTGGATGAAATTAATGACGCCTTCGACCTGATGCATGAAGGCAAATCCATTCGAACCGTAATTCGTTACTGA", + "dna_sequence_length": 1110, + "functions": [ + "alcohol dehydrogenase class III", + "glutathione-dependent formaldehyde dehydrogenase" + ], + "id": "CDS_353", + "location": [ + [ + "NC_000913", + 379571, + "-", + 1110 + ] + ], + "md5": "339cf45cd3a7298162afe4faea735b49", + "parent_gene": "", + "protein_md5": "8a61fe9fcea284714e8fd8ed4543e47e", + "protein_translation": "MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVIRY", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001226" + ], + [ + "gene_synonym", + "ECK0354" + ], + [ + "gene_synonym", + "EcoGene:EG13296" + ], + [ + "gene_synonym", + "GI:162135894" + ], + [ + "gene_synonym", + "GeneID:944986" + ], + [ + "gene_synonym", + "JW0348" + ], + [ + "gene_synonym", + "NP_414891.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP3" + ], + [ + "gene_synonym", + "b0357" + ], + [ + "gene_synonym", + "frmR" + ], + [ + "gene_synonym", + "yaiN" + ] + ], + "dna_sequence": "ATGCCCAGTACTCCGGAAGAGAAGAAAAAGGTCCTTACTCGAGTTCGTCGTATTCGGGGGCAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAACAGATCGCTGCCGTTCGGGGCGCGGCTAATGGGCTGATGGCAGAAGTGCTTGAAAGCCATATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGTTGACGACACTATTGAACTGGTTCGTGCCTATCTTAAATAG", + "dna_sequence_length": 276, + "functions": [ + "regulator protein that represses frmRAB operon" + ], + "id": "CDS_354", + "location": [ + [ + "NC_000913", + 379881, + "-", + 276 + ] + ], + "md5": "9dd1951a0d13876fa640cb91ec729761", + "parent_gene": "", + "protein_md5": "42aa88b8937af3dbc7154b9a93528a6f", + "protein_translation": "MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001230" + ], + [ + "gene_synonym", + "ECK0355" + ], + [ + "gene_synonym", + "EcoGene:EG13297" + ], + [ + "gene_synonym", + "GI:16128343" + ], + [ + "gene_synonym", + "GeneID:945014" + ], + [ + "gene_synonym", + "JW0349" + ], + [ + "gene_synonym", + "NP_414892.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47534" + ], + [ + "gene_synonym", + "b0358" + ], + [ + "gene_synonym", + "yaiO" + ] + ], + "dna_sequence": "ATGATAAAACGGACGTTATTAGCGGCGGCCATTTTTAGCGCATTGCCCGCTTATGCCGGGTTAACTTCCATTACCGCGGGCTACGATTTTACCGATTATTCTGGCGATCATGGCAACCGTAATTTAGCGTATGCTGAACTGGTGGCGAAAGTTGAAAACGCAACGCTGCTTTTTAATCTTTCCCAGGGGCGTCGTGATTATGAAACTGAACATTTCAATGCCACTCGCGGTCAGGGTGCGGTCTGGTATAAATGGAATAACTGGCTGACAACCCGAACGGGTATTGCCTTTGCGGATAATACGCCGGTCTTTGCCCGCCAGGATTTTCGTCAGGATATTAACCTGGCCCTGTTACCAAAAACGCTTTTCACGACCGGTTATCGCTACACTAAATATTACGATGATGTCGAAGTCGATGCCTGGCAAGGCGGCGTATCACTCTATACTGGCCCGGTGATCACCAGCTACCGCTATACCCATTATGACTCCAGCGATGCAGGTGGTAGTTATAGCAATATGATTTCCGTGCGTCTGAATGACCCGCGCGGCACTGGTTATACGCAACTATGGCTAAGCCGCGGAACAGGTGCTTACACCTATGACTGGACGCCAGAAACACGCTACGGCAGCATGAAGAGCGTCAGTCTGCAACGTATTCAACCGCTGACTGAGCAACTTAATCTCGGGCTGACGGCAGGTAAAGTGTGGTACGACACCCCAACCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGA", + "dna_sequence_length": 774, + "functions": [ + "outer membrane protein" + ], + "id": "CDS_355", + "location": [ + [ + "NC_000913", + 380842, + "-", + 774 + ] + ], + "md5": "871613a4befe5420e031066f89535942", + "parent_gene": "", + "protein_md5": "4af68b08710e8e38578c22e3b511f9cf", + "protein_translation": "MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001232" + ], + [ + "gene_synonym", + "ASAP:ABE-0001241" + ], + [ + "gene_synonym", + "ASAP:ABE-0285111" + ], + [ + "gene_synonym", + "ECK0356" + ], + [ + "gene_synonym", + "EcoGene:EG14236" + ], + [ + "gene_synonym", + "GeneID:4056039" + ], + [ + "gene_synonym", + "JW0350" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75697" + ], + [ + "gene_synonym", + "b4579" + ], + [ + "gene_synonym", + "yaiF" + ], + [ + "gene_synonym", + "yaiX" + ] + ], + "dna_sequence": "ATGGACTTATTGCCTTTTTTACTGGACGCGAACCTCAGCGCGACAAACCCACCCGCTATTCCGCACTGGTGGAAGCGTCAACCGCTTATTCCCAACCTTCTGTCACAGGAACTGAAAAACTATCTGAAGCTTAATGTTAAAGAGAAAAATATTCAGATTGCAGACCAGGTAATTATTGATGAAACTGCAGGTGAAGTTGTTATCGGCGCGAATACCCGTATTTGTCATGGTGCCGTTATTCAGGGTCCGGTAGTGATTGGCGCAAACTGCCTGATAGGTAATAGTAATTATGCGTTTATTCGTCCTGGCACAATAATCAGCAATGGCGTAAAAATTGGTTTTGCCACCGAGATTAAAAATGCGGTTATTGAAGCGGAAGCAACGATTGGTCCGCAATGTTTTATTGCCGACTCGGTAGTTGCAAACCAGGCATATTTAGGCGCACAAGTACGTACCAGTAATCATCGTCTGGATGAACAGCCCGTGTCTGTTCGAACTCCAGAGGGAATTATCGCTACCGGATGCGATAAATTAGGTTGTTATATCGGGCAGCGTTCACGCCTTGGCGTACAAGTTATTATTTTGCCTGGGCGAATTATTTCCCCGAACACGCAACTTGGCCCGCGCGTGATTGTAGAACGTAATTTACCTACCGGAACTTATTCACTCCGACAAGAACTTATCCGTACAGGAGATTAA", + "dna_sequence_length": 699, + "id": "CDS_356", + "location": [ + [ + "NC_000913", + 382872, + "-", + 282 + ], + [ + "NC_000913", + 381260, + "-", + 417 + ] + ], + "md5": "11dbf8111857301b90eadc3a84d73ab9", + "parent_gene": "", + "protein_md5": "56f18451bbd1684f80d75aa94f605938", + "protein_translation": "MDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQELKNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNSNYAFIRPGTIISNGVKIGFATEIKNAVIEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001237" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698224" + ], + [ + "gene_synonym", + "GeneID:945025" + ], + [ + "gene_synonym", + "NP_414894.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF40" + ], + [ + "gene_synonym", + "b0360" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_357", + "location": [ + [ + "NC_000913", + 381351, + "+", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001239" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16128346" + ], + [ + "gene_synonym", + "GeneID:945203" + ], + [ + "gene_synonym", + "NP_414895.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF53" + ], + [ + "gene_synonym", + "b0361" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_358", + "location": [ + [ + "NC_000913", + 381674, + "+", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001243" + ], + [ + "gene_synonym", + "ECK0360" + ], + [ + "gene_synonym", + "EcoGene:EG13298" + ], + [ + "gene_synonym", + "GI:16128348" + ], + [ + "gene_synonym", + "GeneID:945308" + ], + [ + "gene_synonym", + "JW0355" + ], + [ + "gene_synonym", + "NP_414897.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47536" + ], + [ + "gene_synonym", + "b0363" + ], + [ + "gene_synonym", + "yaiP" + ] + ], + "dna_sequence": "ATGAAAACCTGGATATTTATCTGTATGTCCATAGCAATGTTGCTATGGTTTTTAAGTACGCTAAGACGTAAACCCAGTCAAAAGAAAGGCTGTATTGACGCCATTATACCTGCGTATAACGAAGGCCCGTGTCTGGCGCAGTCACTGGATAATCTACTGCGTAACCCTTATTTTTGCCGGGTAATTTGCGTTAACGACGGCTCCACGGACAATACCGAAGCGGTCATGGCGGAAGTCAAACGCAAATGGGGCGACCGCTTTGTTGCCGTCACGCAAAAAAATACCGGTAAAGGTGGTGCGCTGATGAATGGCCTCAATTACGCCACCTGCGACCAGGTTTTTTTAAGTGATGCCGACACCTATGTTCCGCCCGATCAAGACGGAATGGGCTATATGCTGGCAGAAATTGAGCGCGGTGCCGATGCCGTAGGCGGCATTCCCTCTACTGCGTTGAAAGGCGCGGGTCTGTTACCGCACATCCGCGCGACCGTAAAGTTGCCGATGATTGTTATGAAGCGCACGCTACAGCAGCTCCTGGGTGGCGCACCGTTTATTATCAGCGGTGCCTGCGGGATGTTCCGTACTGATGTATTGCGTAAGTTCGGTTTCTCGGATCGTACTAAAGTCGAAGACCTTGATCTCACCTGGACATTGGTGGCAAACGGCTACCGTATTCGGCAGGCGAATCGCTGCATCGTATACCCACAGGAATGCAACAGCCCGCGTGAGGAGTGGCGTCGCTGGCGGCGTTGGATTGTGGGATACGCGGTCTGTATGCGCCTGCATAAAAGACTTTTATTTAGCCGCTTCGGTATCTTCAGTATATTTCCTATGCTGTTGGTTGTGCTTTATGGCGTTGGGATTTATCTCACTACCTGGTTTAATGAATTCATCACCACCGGGCCGCATGGAGTGGTGTTGGCAATGTTTCCGCTTATCTGGGTCGGCGTAGTTTGTGTTATTGGTGCTTTTAGCGCCTGGTTTCATCGTTGCTGGTTGTTGGTGCCTTTAGCGCCGCTTTCCGTTGTGTATGTATTATTAGCTTATGCCATCTGGATTATTTATGGACTTATTGCCTTTTTTACTGGACGCGAACCTCAGCGCGACAAACCCACCCGCTATTCCGCACTGGTGGAAGCGTCAACCGCTTATTCCCAACCTTCTGTCACAGGAACTGAAAAACTATCTGAAGCTTAA", + "dna_sequence_length": 1197, + "functions": [ + "putative family 2 glycosyltransferase" + ], + "id": "CDS_359", + "location": [ + [ + "NC_000913", + 383935, + "-", + 1197 + ] + ], + "md5": "9e9a981207c965cbb46c5bc14d22d3ba", + "parent_gene": "", + "protein_md5": "caadef463d9eed2abb0700f4a1ef3286", + "protein_translation": "MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001249" + ], + [ + "gene_synonym", + "ECK0361" + ], + [ + "gene_synonym", + "EcoGene:EG13302" + ], + [ + "gene_synonym", + "GI:90111121" + ], + [ + "gene_synonym", + "GeneID:946967" + ], + [ + "gene_synonym", + "JW0356" + ], + [ + "gene_synonym", + "NP_414898.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71311" + ], + [ + "gene_synonym", + "b0364" + ], + [ + "gene_synonym", + "yaiS" + ] + ], + "dna_sequence": "GTGGATAAGGTTTTAGATTCAGCCCTCCTTTCTTCGGCAAATAAAAGAAAGGGTATCCTTGCTATTGGCGCACATCCTGACGATATAGAATTAGGCTGTGGCGCATCGCTTGCTCGTCTTGCGCAAAAAGGAATTTATATCGCAGCCGTGGTGATGACTACCGGCAACTCTGGCACAGATGGAATAATCGATCGCCATGAAGAATCGCGCAACGCCCTAAAGATATTAGGGTGCCACCAAACTATTCATCTTAATTTTGCTGACACCCGCGCTCATTTACAGCTCAATGATATGATTTCCGCCCTGGAAGACATCATTAAAAATCAAATTCCTTCTGATGTTGAAATCATGCGGGTATATACCATGCATGATGCCGACCGCCATCAGGATCATCTTGCTGTTTATCAAGCTTCAATGGTTGCCTGCCGAACTATTCCGCAAATTCTCGGCTACGAAACCCCAAGTACCTGGCTTTCATTTATGCCTCAGGTTTTTGAATCCGTTAAAGAAGAATATTTCACAGTCAAACTTGCTGCATTAAAAAAACATAAAAGCTAG", + "dna_sequence_length": 558, + "functions": [ + "putative PIG-L family deacetylase" + ], + "id": "CDS_360", + "location": [ + [ + "NC_000913", + 384616, + "-", + 558 + ] + ], + "md5": "d46b0996844fb6eb3b29aef8b8843de3", + "parent_gene": "", + "protein_md5": "1a6966fe480a96f12c4f1ee392dce1f3", + "protein_translation": "MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAALKKHKS", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001256" + ], + [ + "gene_synonym", + "ECK0362" + ], + [ + "gene_synonym", + "EcoGene:EG13300" + ], + [ + "gene_synonym", + "GI:90111122" + ], + [ + "gene_synonym", + "GeneID:945030" + ], + [ + "gene_synonym", + "JW0357" + ], + [ + "gene_synonym", + "NP_414899.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47537" + ], + [ + "gene_synonym", + "b0365" + ], + [ + "gene_synonym", + "ssiA" + ], + [ + "gene_synonym", + "tauA" + ], + [ + "gene_synonym", + "yaiR" + ] + ], + "dna_sequence": "ATGGCAATTTCATCGCGTAACACACTTCTTGCCGCACTGGCATTCATCGCTTTTCAGGCACAGGCGGTGAACGTCACCGTGGCGTATCAAACCTCAGCCGAACCGGCGAAAGTGGCTCAGGCCGACAACACCTTTGCTAAAGAAAGCGGAGCAACCGTGGACTGGCGTAAGTTTGACAGCGGAGCCAGCATCGTGCGGGCGCTGGCTTCAGGCGACGTGCAAATCGGCAACCTCGGTTCCAGCCCGTTAGCGGTTGCAGCCAGCCAACAGGTGCCGATTGAAGTCTTCTTGCTGGCGTCAAAACTGGGTAACTCCGAAGCGCTGGTGGTAAAGAAAACTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGGTTAACGCCCTGGAAAAAGACGGCAAGGTGTTGACCGATTCTGAACAGGTCGGGCAGTGGGGCGCGCCAACGCTGGACGTCTGGGTGGTGCGCAAAGATTTTGCCGAGAAACATCCTGAGGTCGTGAAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGCAACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGAATACCTATCTGACGCCGCAGCAACAAACGGCAGAACTGACCGGACCGGTGAACAAAGCGATCATCGACACCGCGCAGTTTTTGAAAGAGCAGGGCAAGGTCCCGGCTGTAGCGAATGATTACAGCCAGTACGTTACCTCGCGCTTCGTGCAATAA", + "dna_sequence_length": 963, + "functions": [ + "taurine ABC transporter periplasmic binding protein" + ], + "id": "CDS_361", + "location": [ + [ + "NC_000913", + 385232, + "+", + 963 + ] + ], + "md5": "8ff6ecb099b73518a6bace316cc5d2eb", + "parent_gene": "", + "protein_md5": "ac3787434fe6e316d5a66e7e54aeb9c9", + "protein_translation": "MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDVWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001259" + ], + [ + "gene_synonym", + "ECK0363" + ], + [ + "gene_synonym", + "EcoGene:EG13299" + ], + [ + "gene_synonym", + "GI:16128351" + ], + [ + "gene_synonym", + "GeneID:945027" + ], + [ + "gene_synonym", + "JW0358" + ], + [ + "gene_synonym", + "NP_414900.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47538" + ], + [ + "gene_synonym", + "b0366" + ], + [ + "gene_synonym", + "ssiB" + ], + [ + "gene_synonym", + "tauB" + ], + [ + "gene_synonym", + "yaiQ" + ] + ], + "dna_sequence": "ATGCTGCAAATCTCTCATCTTTACGCCGATTATGGCGGCAAACCGGCACTGGAAGATATCAACCTGACGCTGGAAAGCGGCGAGCTACTGGTGGTGCTGGGGCCGTCCGGCTGCGGTAAAACCACCCTGCTGAATCTGATTGCCGGTTTTGTGCCTTATCAGCATGGCAGCATTCAACTGGCGGGTAAGCGTATTGAGGGACCGGGAGCAGAGCGTGGCGTAGTTTTTCAGAATGAAGGGCTACTACCGTGGCGCAATGTACAGGACAACGTGGCGTTCGGCCTGCAATTGGCAGGTATAGAGAAAATGCAGCGACTGGAAATCGCGCACCAGATGCTGAAAAAAGTGGGGCTGGAAGGCGCAGAAAAACGCTACATCTGGCAGCTTTCCGGTGGTCAACGTCAGCGGGTGGGGATTGCTCGTGCGCTGGCGGCGAATCCCCAGCTGTTATTACTCGACGAACCGTTTGGTGCGCTGGACGCCTTCACCCGCGACCAGATGCAAACCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTTCTCATGA", + "dna_sequence_length": 768, + "functions": [ + "taurine ABC transporter ATPase" + ], + "id": "CDS_362", + "location": [ + [ + "NC_000913", + 386207, + "+", + 768 + ] + ], + "md5": "6009723f67d206e21a0be5075d2063d9", + "parent_gene": "", + "protein_md5": "4886c79ded078ae53828005123e3f29e", + "protein_translation": "MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFARRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001261" + ], + [ + "gene_synonym", + "ECK0364" + ], + [ + "gene_synonym", + "EcoGene:EG13301" + ], + [ + "gene_synonym", + "GI:16128352" + ], + [ + "gene_synonym", + "GeneID:945026" + ], + [ + "gene_synonym", + "JW0359" + ], + [ + "gene_synonym", + "NP_414901.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47539" + ], + [ + "gene_synonym", + "b0367" + ], + [ + "gene_synonym", + "ssiC" + ], + [ + "gene_synonym", + "tauC" + ], + [ + "gene_synonym", + "yaiJ" + ] + ], + "dna_sequence": "ATGAGTGTGCTCATTAATGAAAAACTGCATTCGCGGCGGCTGAAATGGCGCTGGCCGCTCTCGCGTCAGGTGACCTTAAGCATTGGCACGTTAGCGGTTTTACTCACCGTATGGTGGACGGTGGCGACGCTGCAACTGATTAGCCCGCTATTTTTGCCGCCGCCGCAACAGGTACTGGAAAAACTACTCACCATTGCCGGACCGCAAGGCTTTATGGACGCCACGCTGTGGCAGCATCTGGCAGCCAGTCTGACGCGCATTATGCTGGCGCTATTTGCAGCGGTGTTGTTCGGTATTCCGGTCGGGATCGCGATGGGACTTAGCCCTACGGTACGCGGCATTCTGGATCCGATAATCGAGCTTTATCGTCCGGTGCCGCCGCTGGCTTATTTGCCGCTGATGGTGATCTGGTTTGGTATTGGTGAAACCTCGAAGATCTTACTGATCTATTTAGCGATTTTTGCACCGGTGGCGATGTCGGCGCTGGCGGGGGTGAAAAGCGTGCAGCAGGTTCGCATTCGTGCCGCCCAGTCGCTGGGTGCCAGCCGTGCGCAGGTGCTGTGGTTTGTCATTTTGCCCGGTGCGCTGCCGGAAATCCTCACCGGATTACGTATTGGTCTGGGGGTGGGCTGGTCTACGCTGGTGGCGGCGGAGCTGATTGCCGCGACGCGCGGTTTAGGATTTATGGTTCAGTCAGCGGGTGAATTTCTCGCAACTGACGTGGTGCTGGCGGGGATCGCGGTGATTGCGATTATCGCCTTTCTTTTAGAACTGGGTCTGCGCGCGTTACAGCGCCGCCTGACGCCCTGGCATGGAGAAGTACAATGA", + "dna_sequence_length": 828, + "functions": [ + "taurine ABC transporter permease" + ], + "id": "CDS_363", + "location": [ + [ + "NC_000913", + 386971, + "+", + 828 + ] + ], + "md5": "26725be1bc5568c4fd762a3f60b79b94", + "parent_gene": "", + "protein_md5": "577861f0dcd1161819cf7d44d6b95308", + "protein_translation": "MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001263" + ], + [ + "gene_synonym", + "ECK0365" + ], + [ + "gene_synonym", + "EcoGene:EG12423" + ], + [ + "gene_synonym", + "GI:16128353" + ], + [ + "gene_synonym", + "GeneID:945021" + ], + [ + "gene_synonym", + "JW0360" + ], + [ + "gene_synonym", + "NP_414902.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37610" + ], + [ + "gene_synonym", + "b0368" + ], + [ + "gene_synonym", + "ssiD" + ], + [ + "gene_synonym", + "tauD" + ], + [ + "gene_synonym", + "yaiG" + ] + ], + "dna_sequence": "ATGAGTGAACGTCTGAGCATTACCCCGCTGGGGCCGTATATCGGCGCACAAATTTCGGGTGCCGACCTGACGCGCCCGTTAAGCGATAATCAGTTTGAACAGCTTTACCATGCGGTGCTGCGCCATCAGGTGGTGTTTCTACGCGATCAAGCTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCTGGCAGCTAAAGAGTTACCTTCGACCGGCGGTGATACGCTCTGGACCAGCGGTATTGCGGCCTATGAGGCGCTCTCTGTTCCCTTCCGCCAGCTGCTGAGTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTTCCCGGAATACAAATACCGCAAAACCGAGGAGGAACATCAACGCTGGCGCGAGGCGGTCGCGAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAATTGTTGATGTGAGCGAGAAAGAGAGCGAAGCCTTGTTAAGTTTTTTGTTTGCCCATATCACCAAACCGGAGTTTCAGGTGCGCTGGCGCTGGCAACCAAATGATATTGCGATTTGGGATAACCGCGTGACCCAGCACTATGCCAATGCCGATTACCTGCCACAGCGACGGATAATGCATCGGGCGACGATCCTTGGGGATAAACCGTTTTATCGGGCGGGGTAA", + "dna_sequence_length": 852, + "functions": [ + "taurine dioxygenase, 2-oxoglutarate-dependent" + ], + "id": "CDS_364", + "location": [ + [ + "NC_000913", + 387795, + "+", + 852 + ] + ], + "md5": "e8dc4327ec5a8148fe19455cc4ff0062", + "parent_gene": "", + "protein_md5": "f26d5d282df7f8f52826e8a91d695d9a", + "protein_translation": "MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRAG", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001266" + ], + [ + "gene_synonym", + "ECK0366" + ], + [ + "gene_synonym", + "EcoGene:EG10428" + ], + [ + "gene_synonym", + "GI:90111123" + ], + [ + "gene_synonym", + "GeneID:945017" + ], + [ + "gene_synonym", + "JW0361" + ], + [ + "gene_synonym", + "NP_414903.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB2" + ], + [ + "gene_synonym", + "b0369" + ], + [ + "gene_synonym", + "hemB" + ], + [ + "gene_synonym", + "ncf" + ] + ], + "dna_sequence": "ATGACAGACTTAATCCAACGCCCTCGTCGCCTGCGCAAATCTCCTGCGCTGCGCGCTATGTTTGAAGAGACAACACTTAGCCTTAACGACCTGGTGTTGCCGATCTTTGTTGAAGAAGAAATTGACGACTACAAAGCCGTTGAAGCCATGCCAGGCGTGATGCGCATTCCAGAGAAACATCTGGCACGCGAAATTGAACGCATCGCCAACGCCGGTATTCGTTCCGTGATGACTTTTGGCATCTCTCACCATACCGATGAAACCGGCAGCGATGCCTGGCGGGAAGATGGACTGGTGGCGCGTATGTCGCGCATCTGCAAGCAGACCGTGCCAGAAATGATCGTTATGTCAGACACCTGCTTCTGTGAATACACTTCTCACGGTCACTGCGGTGTGCTGTGCGAGCATGGCGTCGACAACGACGCGACTCTGGAAAATTTAGGCAAGCAAGCCGTGGTTGCAGCTGCTGCAGGTGCAGACTTCATCGCCCCTTCCGCCGCGATGGACGGCCAGGTACAGGCGATTCGTCAGGCGCTGGACGCTGCGGGATTTAAAGATACGGCGATTATGTCGTATTCGACCAAGTTCGCCTCCTCCTTTTATGGCCCGTTCCGTGAAGCTGCCGGAAGCGCATTAAAAGGCGACCGCAAAAGCTATCAGATGAACCCAATGAACCGTCGTGAGGCGATTCGTGAATCACTGCTGGATGAAGCCCAGGGCGCAGACTGCCTGATGGTTAAACCTGCTGGAGCGTACCTCGACATCGTGCGTGAGCTGCGTGAACGTACTGAATTGCCGATTGGCGCGTATCAGGTGAGCGGTGAGTATGCGATGATTAAGTTCGCCGCGCTGGCGGGTGCTATAGATGAAGAGAAAGTCGTGCTCGAAAGCTTAGGTTCGATTAAGCGTGCGGGTGCGGATCTGATTTTCAGCTACTTTGCGCTGGATTTGGCTGAGAAGAAGATTCTGCGTTAA", + "dna_sequence_length": 975, + "functions": [ + "5-aminolevulinate dehydratase (porphobilinogen synthase)" + ], + "id": "CDS_365", + "location": [ + [ + "NC_000913", + 389727, + "-", + 975 + ] + ], + "md5": "d29386c1b4e92b37bbef589903917b0c", + "parent_gene": "", + "protein_md5": "28ea057f2be462c5d1aa36c12293c25a", + "protein_translation": "MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001274" + ], + [ + "gene_synonym", + "ASAP:ABE-0001288" + ], + [ + "gene_synonym", + "ASAP:ABE-0285112" + ], + [ + "gene_synonym", + "ECK0368" + ], + [ + "gene_synonym", + "EcoGene:EG13605" + ], + [ + "gene_synonym", + "GeneID:4056040" + ], + [ + "gene_synonym", + "JW0362" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77199" + ], + [ + "gene_synonym", + "b4580" + ], + [ + "gene_synonym", + "yaiT" + ], + [ + "gene_synonym", + "yaiU" + ] + ], + "dna_sequence": "ATGCACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAAACTATGATACCTGGACTTATATCGATAATCCCGTTACAGCACTTGATTGGGATCATATGGATAAGGCAGGCACTGTAGATGGCAACTATGTAAACTATAGTGGTTTTGTCTATTACAACAACACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAACCATGATTATGCAGACAGTACTGCTAATCAGCTTGATATCAGTAATTCAGTGATTCACGGTTCGATTACTTCTATGCTGCCTGGCGGTTATTATGATCGTTTTGATGCAGATGGTAATAATCTGGGTGGATATGATTTTTACACTGATGCGGTTGTTGATACACACTGGCGTGATGGTGATGTTTTCACTTTGAACATTGCTAACACTACTATTGATGATGATTATGAAGCTCTTTACTTCACTGATTCTTATAAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCAATGTCCTTTACTGCTTCAGGTTCCGACTATGCGATGAAGAACAATGTATTCCTCAGCAATTCAACGCTGATGGGTGATGTTGCCTTTACCAGCACCTGGAATAGTAATTTTGATCCGAATGGTCATGATTCCAACGGTGACGGGGTGAAAGATACCAACGGGGGTTGGACTGATGATAGCCTCAACGTTGATGAACTAAATCTCACTCTCGATAACGGAAGCAAGTGGGTTGGTCAGGCAATTTATAACGTTGCTGAAACGTCAGCAATGTATGATGTTGCTACAAACAGCCTTACTCCTGATGCAACATATGAAAACAATGACTGGAAACGTGTTGTTGATGACAAGGTCTTCCAGAGCGGTGTATTTAACGTAGCGTTGAATAACGGTTCTGAATGGGATACTACAGGTCGTTCCATCGTTGATACCTTGACAGTTAATAATGGTTCTCAGGTTAATGTTTCGGAATCTAAATTAACTTCAGATACTATCGATTTAACTAACGGTTCTTCGCTGAACATTGGTGAAGATGGCTACGTTGATACCGATCATCTGACTATTAACTCCTACAGTACTGTTGCGTTGACCGAATCTACTGGGTGGGGGGCTGATTACAACCTGTACGCCAATACTATCACCGTAACTAACGGCGGTGTATTGGATGTGAACGTTGATCAGTTCGATACTGAAGCTTTCCGTACTGACAAACTGGAACTGACCAGCGGCAACATCGCTGACCATAACGGTAACGTAGTATCTGGTGTGTTCGATATCCATAGCAGCGATTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGTACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCAACAGCAACGCGACCTTCTCTGCTGCTAACAAAGCTGACCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTGATAACGGCGGCGCATGGGTAAGCTACTTCGGTGGTAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAACCATGAGCAACGGTACTTACGTTGACGGTAGCACCAACTCCGACGCTTGGGGCTTCGGTTTGAAAGCCGGTTACGACTTCAAACTGGGTGATGCTGGTTACGTGACTCCTTACGGCAGCGTTTCTGGTCTGTTCCAGTCTGGTGATGACTACCAGCTGAGCAACGACATGAAAGTTGACGGTCAGTCTTACGACAGCATGCGTTATGAACTGGGTGTAGATGCAGGTTATACCTTCACCTACAGCGAAGATCAGGCTCTGACTCCGTACTTCAAACTGGCTTACGTCTACGACGACTCTAACAACGATAACGATGTGAACGGCGATTCCATCGATAACGGTACTGAAGGGTCTGCGGTACGTGTTGGTCTGGGTACTCAGTTTAGCTTCACCAAGAACTTCAGCGCCTATACCGATGCTAACTACCTCGGTGGTGGTGACGTAGATCAAGACTGGTCCGCGAACGTGGGTGTTAAATATACCTGGTAA", + "dna_sequence_length": 2907, + "id": "CDS_366", + "location": [ + [ + "NC_000913", + 390251, + "+", + 1458 + ], + [ + "NC_000913", + 392970, + "+", + 1449 + ] + ], + "md5": "684ceacf89bc19348f5e9cd16dd60103", + "parent_gene": "", + "protein_md5": "7b0211c7e767c5a0dad83c01ab71aaa3", + "protein_translation": "MHSWKKKLVVSQLALACTLAITSQANAANYDTWTYIDNPVTALDWDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTANQLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIANTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIALSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYAGPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDTNGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWKRVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVVSGVFDIHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW", + "protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001277" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16128357" + ], + [ + "gene_synonym", + "GeneID:945036" + ], + [ + "gene_synonym", + "NP_414906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF80" + ], + [ + "gene_synonym", + "b0372" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", + "dna_sequence_length": 867, + "functions": [ + "IS3 transposase B" + ], + "id": "CDS_367", + "location": [ + [ + "NC_000913", + 392605, + "-", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001279" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524701" + ], + [ + "gene_synonym", + "GeneID:946900" + ], + [ + "gene_synonym", + "NP_414907.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF67" + ], + [ + "gene_synonym", + "b0373" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_368", + "location": [ + [ + "NC_000913", + 392901, + "-", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001290" + ], + [ + "gene_synonym", + "ECK0370" + ], + [ + "gene_synonym", + "EcoGene:EG13607" + ], + [ + "gene_synonym", + "GI:226524702" + ], + [ + "gene_synonym", + "GeneID:946902" + ], + [ + "gene_synonym", + "JW0366" + ], + [ + "gene_synonym", + "NP_414909.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP5" + ], + [ + "gene_synonym", + "b0375" + ], + [ + "gene_synonym", + "yaiV" + ] + ], + "dna_sequence": "ATGTTATCTGTAGTTAAACCTCTTCAGGAATTTGGTAAGCTCGATAAATGTTTGTCCAGATACGGTACGCGCTTCGAGTTTAATAATGAAAAGCAAGTTATATTTTCCAGTGATGTCAATAACGAAGATACTTTCGTTATTTTAGAGGGAGTTATCTCTCTGCGTAGAGAAGAAAACGTACTTATCGGTATTACCCAGGCTCCTTATATTATGGGGCTGGCTGATGGTTTAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATCCATCAACGTACACGCATATCGCGTTCTGTCGTCGCAGAAGTTCTCGCTGCTTTGCGTAAAGGCGGCTATATCGAAATGAATAAAGGCAAACTGGTCGCTATCAACCGTTTGCCTTCAGAGTATTAA", + "dna_sequence_length": 624, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_369", + "location": [ + [ + "NC_000913", + 394506, + "+", + 624 + ] + ], + "md5": "8f41b85770a43f21e88378f6cd1bc33a", + "parent_gene": "", + "protein_md5": "ed38d7247e1cb3e9c256040c013699f8", + "protein_translation": "MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001292" + ], + [ + "gene_synonym", + "ECK0371" + ], + [ + "gene_synonym", + "EcoGene:EG12867" + ], + [ + "gene_synonym", + "GI:16128361" + ], + [ + "gene_synonym", + "GeneID:946904" + ], + [ + "gene_synonym", + "JW5052" + ], + [ + "gene_synonym", + "NP_414910.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD70" + ], + [ + "gene_synonym", + "ampH" + ], + [ + "gene_synonym", + "b0376" + ], + [ + "gene_synonym", + "yaiH" + ] + ], + "dna_sequence": "TTGAAACGTAGTCTGCTTTTTTCTGCCGTGCTGTGTGCGGCGTCATTGACCTCCGTCCATGCGGCGCAGCCGATCACTGAACCGGAGTTTGCCTCTGATATTGTCGATCGTTATGCCGATCATATTTTTTACGGCAGCGGTGCCACGGGGATGGCTCTGGTTGTTATCGACGGTAACCAGCGCGTCTTTCGCAGTTATGGCGAAACGCGACCTGGTAATAACGTTCGCCCGCAGCTGGATTCGGTCGTGCGTATTGCTTCCCTCACCAAGCTAATGACCAGTGAGATGCTGGTGAAATTGCTCGACCAGGGGACCGTGAAGTTAAACGATCCGCTAAGTAAATATGCTCCGCCAGGCGCACGCGTGCCAACCTACAATGGGACGCCCATTACGCTGGTCAATCTGGCAACCCATACCAGCGCCCTGCCCCGTGAACAGCCCGGTGGCGCGGCACATCGTCCGGTGTTTGTCTGGCCAACGCGCGAGCAACGCTGGAAATACCTTTCTACGGCGAAGCTGAAAGCCGCGCCAGGCAGTCAGGCGGCGTACTCTAACCTTGCGTTCGACCTGCTGGCAGATGCACTGGCGAATGCGTCCGGCAAGCCTTATACCCAGTTGTTTGAAGAGCAGATTACCCGTCCATTGGGGATGAAAGACACCACCTACACCCCCTCACCGGATCAGTGCCGCCGTTTAATGGTTGCTGAGCGCGGTGCCAGTCCGTGCAATAACACGCTGGCGGCAATTGGCAGCGGCGGCGTCTATTCCACGCCTGGCGATATGATGCGCTGGATGCAGCAGTATTTGTCATCTGATTTTTATCAGCGCAGTAACCAGGCAGATCGCATGCAGACGTTGATTTATCAGCGCGCGCAGTTTACGAAAGTGATTGGCATGGATGTCCCCGGCAAAGCGGATGCGCTTGGTTTAGGTTGGGTATATATGGCCCCGAAAGAGGGTCGTCCGGGGATTATTCAGAAGACAGGCGGTGGTGGCGGTTTCATTACCTATATGGCGATGATCCCGCAGAAGAATATTGGCGCGTTTGTGGTGGTCACTCGTTCGCCGTTGACGCGCTTTAAAAATATGAGCGATGGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGA", + "dna_sequence_length": 1158, + "functions": [ + "D-alanyl-D-alanine- carboxypeptidase/endopeptidase", + "penicillin-binding protein", + "weak beta-lactamase" + ], + "id": "CDS_370", + "location": [ + [ + "NC_000913", + 396287, + "-", + 1158 + ] + ], + "md5": "cf60c4d3e606717ad9b570eff3dcf954", + "parent_gene": "", + "protein_md5": "f3778eedc060501efe6cd009804ae842", + "protein_translation": "MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001297" + ], + [ + "gene_synonym", + "ECK0372" + ], + [ + "gene_synonym", + "EcoGene:EG10928" + ], + [ + "gene_synonym", + "GI:16128362" + ], + [ + "gene_synonym", + "GeneID:946884" + ], + [ + "gene_synonym", + "JW0368" + ], + [ + "gene_synonym", + "NP_414911.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFY6" + ], + [ + "gene_synonym", + "b0377" + ], + [ + "gene_synonym", + "sbmA" + ] + ], + "dna_sequence": "ATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTTTTTCTCTCGGCCTTCGTTTGGGCATTGATTGCCGTTATCTTCTGGCAAGCCGGTGGGGGTGACTGGGTGGCGCGTATCACCGGCGCTTCCGGGCAGATCCCGATTAGCGCCGCGCGTTTCTGGTCGTTGGATTTCCTGATTTTTTACGCTTACTACATTGTTTGCGTAGGACTTTTTGCATTGTTCTGGTTTATCTACAGCCCGCATCGTTGGCAATACTGGTCAATACTCGGTACTGCACTGATCATCTTCGTCACCTGGTTTTTGGTGGAAGTCGGGGTCGCCGTCAACGCCTGGTATGCGCCGTTCTATGATCTGATTCAAACCGCGCTAAGTTCGCCGCATAAAGTCACCATCGAACAATTTTACCGCGAAGTGGGCGTCTTTCTGGGGATTGCGCTGATCGCTGTGGTGATCAGTGTGCTGAACAACTTCTTTGTCAGTCACTACGTGTTCCGCTGGCGTACAGCGATGAACGAATATTACATGGCGAACTGGCAACAACTGCGTCATATCGAAGGGGCCGCACAGCGTGTGCAGGAAGACACCATGCGTTTTGCTTCAACGCTGGAGAATATGGGCGTCAGTTTTATCAACGCCATCATGACGTTGATCGCCTTCCTGCCGGTGCTGGTAACGCTCTCCGCGCATGTGCCGGAGCTGCCGATTATCGGGCACATTCCGTATGGTCTGGTGATTGCCGCAATCGTCTGGTCGCTGATGGGGACCGGATTGCTGGCAGTGGTAGGGATCAAACTGCCGGGGCTGGAGTTTAAAAACCAGCGTGTAGAGGCTGCCTACCGTAAAGAGCTGGTTTATGGTGAAGACGATGCCACGCGCGCGACGCCGCCTACGGTACGCGAGCTGTTTAGCGCCGTACGGAAAAACTATTTCCGCCTCTATTTTCACTATATGTATTTCAACATCGCCCGCATTCTCTATTTGCAGGTCGATAACGTTTTCGGTTTGTTCTTGCTGTTTCCGTCAATTGTTGCCGGTACGATTACGCTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAA", + "dna_sequence_length": 1221, + "functions": [ + "peptide antibiotic transporter" + ], + "id": "CDS_371", + "location": [ + [ + "NC_000913", + 396639, + "+", + 1221 + ] + ], + "md5": "6871012f6e4d72a85ba9e594384512e4", + "parent_gene": "", + "protein_md5": "7968d0737be07ef472730ce5231f8e2e", + "protein_translation": "MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQIPISAARFWSLDFLIFYAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHELDGDKIQEVTHTLS", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001299" + ], + [ + "gene_synonym", + "ECK0373" + ], + [ + "gene_synonym", + "EcoGene:EG13608" + ], + [ + "gene_synonym", + "GI:16128363" + ], + [ + "gene_synonym", + "GeneID:945038" + ], + [ + "gene_synonym", + "JW0369" + ], + [ + "gene_synonym", + "NP_414912.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77562" + ], + [ + "gene_synonym", + "b0378" + ], + [ + "gene_synonym", + "yaiW" + ] + ], + "dna_sequence": "ATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGTTCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAACCGTTGAAAAAGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGGCTGGCACCGACGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCAAATTATCAGGCAGATCCGGCCGTTCCGGGCTTAAGCAAGATCGCCTGGCAAGAGATTGACCGTCGTGCTGAACGGATGCACATTCCTGCTTTTCTGGTTCATACCGCGCTAAAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGTTAGAGAAAGGTGACAGCTTCTCTTTTGAGGAGACGGCGCTGTACAAGAAAGTTTATCAACTTGCCGAAACGAAAACGGGTAAATCACTCCCCCGCGAAATGTTGCCTGGCATTCAACTGGAAAGCCCGAAAATCACCCGCAACCTGACTACGGCCTGGTTTGCGAAGCGCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGA", + "dna_sequence_length": 1095, + "functions": [ + "microcin Bac7 uptake protein", + "outer membrane surface-exposed lipoprotein" + ], + "id": "CDS_372", + "location": [ + [ + "NC_000913", + 397872, + "+", + 1095 + ] + ], + "md5": "0016cffe3c2d9641c4167e2ec0ae15e0", + "parent_gene": "", + "protein_md5": "1d864791391a4de37124a1b9b6c46773", + "protein_translation": "MSRVNPLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLINMVPMGQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAAKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAETKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ", + "protein_translation_length": 364, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001302" + ], + [ + "gene_synonym", + "ECK0374" + ], + [ + "gene_synonym", + "EcoGene:EG14279" + ], + [ + "gene_synonym", + "GI:16128364" + ], + [ + "gene_synonym", + "GeneID:945223" + ], + [ + "gene_synonym", + "JW0370" + ], + [ + "gene_synonym", + "NP_414913.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP7" + ], + [ + "gene_synonym", + "b0379" + ], + [ + "gene_synonym", + "yaiY" + ] + ], + "dna_sequence": "ATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTGTTTGTGCTGTTTTGCTTTTGGGCTGGGGCGCAATTGCTGAACCTGTTAGTGCATGCGCCCGGCGTCTATGAGCGTTTAATGCAGGTCCAGGAAACAGGTCGCCCACGGGTGGAAATTGGTTTAGGTGTCGGCACCATTTTCGGGCTGATCCCGTTTTTAGTAGGCTGCCTCATTTTTGCAGTGGTGGCGCTATGGCTGCACTGGCGACATCGCCGCCAGTAA", + "dna_sequence_length": 309, + "functions": [ + "DUF2755 family inner membrane protein" + ], + "id": "CDS_373", + "location": [ + [ + "NC_000913", + 399333, + "-", + 309 + ] + ], + "md5": "1f6a3b4779b379239a7b85b5e76a4bc0", + "parent_gene": "", + "protein_md5": "7f96e8cdcba5b70264df8173cbad350b", + "protein_translation": "MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNLLVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ", + "protein_translation_length": 102, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001307" + ], + [ + "gene_synonym", + "ECK0375" + ], + [ + "gene_synonym", + "EcoGene:EG14280" + ], + [ + "gene_synonym", + "GI:90111125" + ], + [ + "gene_synonym", + "GeneID:947355" + ], + [ + "gene_synonym", + "JW5053" + ], + [ + "gene_synonym", + "NP_414914.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAQ0" + ], + [ + "gene_synonym", + "b0380" + ], + [ + "gene_synonym", + "yaiZ" + ] + ], + "dna_sequence": "ATGAATCTGCCTGTAAAAATCCGCCGTGACTGGCACTACTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAA", + "dna_sequence_length": 213, + "functions": [ + "DUF2754 family putative inner membrane protein" + ], + "id": "CDS_374", + "location": [ + [ + "NC_000913", + 399593, + "+", + 213 + ] + ], + "md5": "51dc23374e5862e8d4d572f756ca490f", + "parent_gene": "", + "protein_md5": "48eca8134a8510ca6323f54c8427d41e", + "protein_translation": "MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001309" + ], + [ + "gene_synonym", + "ECK0376" + ], + [ + "gene_synonym", + "EcoGene:EG10213" + ], + [ + "gene_synonym", + "GI:16128366" + ], + [ + "gene_synonym", + "GeneID:945313" + ], + [ + "gene_synonym", + "JW0372" + ], + [ + "gene_synonym", + "NP_414915.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6J8" + ], + [ + "gene_synonym", + "b0381" + ], + [ + "gene_synonym", + "ddlA" + ] + ], + "dna_sequence": "ATGGAAAAACTGCGGGTAGGAATCGTTTTTGGTGGTAAATCAGCGGAACATGAAGTGTCTCTGCAATCGGCAAAAAACATTGTCGATGCCATTGATAAAAGTCGCTTCGACGTTGTGCTGCTGGGCATTGATAAACAAGGGCAATGGCACGTCAGCGATGCCAGCAATTATCTGCTAAATGCAGACGATCCTGCCCATATTGCGTTGCGCCCTTCGGCGACCAGCCTTGCGCAGGTGCCAGGTAAACATGAGCATCAGCTTATCGACGCGCAAAACGGTCAGCCGTTGCCGACGGTGGATGTCATTTTCCCGATTGTCCACGGTACGCTGGGCGAAGATGGTTCCTTGCAGGGAATGCTGCGGGTCGCCAATTTACCGTTTGTAGGTTCTGATGTTCTGGCTTCAGCAGCCTGTATGGACAAAGATGTCACCAAACGTCTGCTACGCGATGCCGGGCTGAACATTGCGCCATTTATTACCCTGACGCGCGCCAATCGTCACAACATTAGTTTTGCCGAAGTGGAGTCTAAACTGGGGTTACCACTGTTTGTAAAACCGGCTAATCAGGGCTCTTCTGTTGGTGTCAGCAAAGTAACCAGTGAAGAACAGTACGCAATTGCCGTCGATCTGGCGTTCGAGTTCGATCATAAAGTGATCGTTGAGCAAGGGATCAAAGGTCGTGAGATCGAATGCGCAGTTCTGGGCAACGACAATCCGCAAGCCAGCACCTGTGGAGAGATCGTACTCACCAGCGATTTCTATGCCTACGACACCAAGTACATTGACGAAGATGGCGCGAAAGTGGTAGTTCCGGCAGCCATTGCGCCAGAAATCAACGATAAGATCCGGGCGATTGCCGTTCAGGCTTATCAAACGTTGGGATGCGCAGGCATGGCGCGTGTAGACGTGTTTTTAACCCCAGAGAACGAAGTGGTGATCAACGAGATCAACACCCTGCCTGGCTTCACTAATATCAGTATGTATCCGAAGCTGTGGCAAGCCAGCGGTCTGGGTTACACCGATCTGATCACACGTTTGATTGAACTGGCGCTGGAGCGTCACGCTGCGGATAACGCATTGAAAACCACAATGTAA", + "dna_sequence_length": 1095, + "functions": [ + "D-alanine-D-alanine ligase A" + ], + "id": "CDS_375", + "location": [ + [ + "NC_000913", + 400923, + "-", + 1095 + ] + ], + "md5": "4e2905bf6715556d6e96563cd3b4bd4f", + "parent_gene": "", + "protein_md5": "da971fe75f46b0e67d0f7a765e069a77", + "protein_translation": "MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNALKTTM", + "protein_translation_length": 364, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001313" + ], + [ + "gene_synonym", + "ECK0377" + ], + [ + "gene_synonym", + "EcoGene:EG11256" + ], + [ + "gene_synonym", + "GI:16128367" + ], + [ + "gene_synonym", + "GeneID:947709" + ], + [ + "gene_synonym", + "JW0373" + ], + [ + "gene_synonym", + "NP_414916.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN9" + ], + [ + "gene_synonym", + "b0382" + ], + [ + "gene_synonym", + "iraP" + ], + [ + "gene_synonym", + "yaiB" + ] + ], + "dna_sequence": "ATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA", + "dna_sequence_length": 261, + "functions": [ + "anti-RssB factor, RpoS stabilzer during Pi starvation", + "anti-adapter protein" + ], + "id": "CDS_376", + "location": [ + [ + "NC_000913", + 401386, + "+", + 261 + ] + ], + "md5": "0276b5649c2f6742a7c1d97195843172", + "parent_gene": "", + "protein_md5": "81df583a371326a910430ba1314133b7", + "protein_translation": "MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001328" + ], + [ + "gene_synonym", + "ECK0378" + ], + [ + "gene_synonym", + "EcoGene:EG10727" + ], + [ + "gene_synonym", + "GI:49176017" + ], + [ + "gene_synonym", + "GeneID:945041" + ], + [ + "gene_synonym", + "JW0374" + ], + [ + "gene_synonym", + "NP_414917.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00634" + ], + [ + "gene_synonym", + "b0383" + ], + [ + "gene_synonym", + "phoA" + ], + [ + "gene_synonym", + "psiA" + ] + ], + "dna_sequence": "GTGAAACAAAGCACTATTGCACTGGCACTCTTACCGTTACTGTTTACCCCTGTGACAAAAGCCCGGACACCAGAAATGCCTGTTCTGGAAAACCGGGCTGCTCAGGGCGATATTACTGCACCCGGCGGTGCTCGCCGTTTAACGGGTGATCAGACTGCCGCTCTGCGTGATTCTCTTAGCGATAAACCTGCAAAAAATATTATTTTGCTGATTGGCGATGGGATGGGGGACTCGGAAATTACTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAGGTATAGATGCCTTACCGCTTACCGGGCAATACACTCACTATGCGCTGAATAAAAAAACCGGCAAACCGGACTACGTCACCGACTCGGCTGCATCAGCAACCGCCTGGTCAACCGGTGTCAAAACCTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGAACAGCTGCTTAACGCTCGTGCCGACGTTACGCTTGGCGGCGGCGCAAAAACCTTTGCTGAAACGGCAACCGCTGGTGAATGGCAGGGAAAAACGCTGCGTGAACAGGCACAGGCGCGTGGTTATCAGTTGGTGAGCGATGCTGCCTCACTGAATTCGGTGACGGAAGCGAATCAGCAAAAACCCCTGCTTGGCCTGTTTGCTGACGGCAATATGCCAGTGCGCTGGCTAGGACCGAAAGCAACGTACCATGGCAATATCGATAAGCCCGCAGTCACCTGTACGCCAAATCCGCAACGTAATGACAGTGTACCAACCCTGGCGCAGATGACCGACAAAGCCATTGAATTGTTGAGTAAAAATGAGAAAGGCTTTTTCCTGCAAGTTGAAGGTGCGTCAATCGATAAACAGGATCATGCTGCGAATCCTTGTGGGCAAATTGGCGAGACGGTCGATCTCGATGAAGCCGTACAACGGGCGCTGGAATTCGCTAAAAAGGAGGGTAACACGCTGGTCATAGTCACCGCTGATCACGCCCACGCCAGCCAGATTGTTGCGCCGGATACCAAAGCTCCGGGCCTCACCCAGGCGCTAAATACCAAAGATGGCGCAGTGATGGTGATGAGTTACGGGAACTCCGAAGAGGATTCACAAGAACATACCGGCAGTCAGTTGCGTATTGCGGCGTATGGCCCGCATGCCGCCAATGTTGTTGGACTGACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAA", + "dna_sequence_length": 1416, + "functions": [ + "bacterial alkaline phosphatase" + ], + "id": "CDS_377", + "location": [ + [ + "NC_000913", + 401747, + "+", + 1416 + ] + ], + "md5": "c9e052049f08d0f3edcfd742ace8ed62", + "parent_gene": "", + "protein_md5": "8a5f1201d7a41231c61a183828c2d5de", + "protein_translation": "MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK", + "protein_translation_length": 471, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001330" + ], + [ + "gene_synonym", + "ECK0379" + ], + [ + "gene_synonym", + "EcoGene:EG11401" + ], + [ + "gene_synonym", + "GI:162135895" + ], + [ + "gene_synonym", + "GeneID:945040" + ], + [ + "gene_synonym", + "JW5054" + ], + [ + "gene_synonym", + "NP_414918.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFM4" + ], + [ + "gene_synonym", + "b0384" + ], + [ + "gene_synonym", + "psiF" + ] + ], + "dna_sequence": "ATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATCAGCAGGCGACGGCGCAGGCGTTGAAAGGGGATGCTCGTAAGACCTACATGAGTGATTGCCTGAAGAACAGCAAGTCTGCGCCTGGCGAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGA", + "dna_sequence_length": 321, + "functions": [ + "PsiF family protein" + ], + "id": "CDS_378", + "location": [ + [ + "NC_000913", + 403281, + "+", + 321 + ] + ], + "md5": "ecd1c3d555c39bce33b1ccd75156b33a", + "parent_gene": "", + "protein_md5": "e39c02ac664f7b5e0d8ab20af3741469", + "protein_translation": "MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001336" + ], + [ + "gene_synonym", + "ECK0380" + ], + [ + "gene_synonym", + "EcoGene:EG11257" + ], + [ + "gene_synonym", + "GI:16128370" + ], + [ + "gene_synonym", + "GeneID:945037" + ], + [ + "gene_synonym", + "JW0376" + ], + [ + "gene_synonym", + "NP_414919.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP1" + ], + [ + "gene_synonym", + "adrA" + ], + [ + "gene_synonym", + "b0385" + ], + [ + "gene_synonym", + "yaiC" + ] + ], + "dna_sequence": "ATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTGCGCTTCGCCCGTCGCGTCAGACTACCCCGTGCGGTTGGCCTGGCTGGCATGTTCTTACCGATTGCTTCAACGCTGGTTTCACACCCGCCGCCGGGCTGGTGGTGGCTGGTGTTGGTCGGCTGGGCGTTCGTCTGGCCGCATTTAGCCTGGCAGATAGCGAGCAGGGCCGTCGATCCGCTTAGCCGGGAAATTTACAACTTAAAAACCGATGCAGTATTAGCGGGAATGTGGGTAGGCGTAATGGGCGTAAACGTGCTGCCTTCCACCGCGATGTTGATGATTATGTGTCTGAATTTGATGGGGGCAGGCGGCCCCCGTCTGTTTGTCGCGGGTCTGGTGTTGATGGTGGTTTCCTGCCTTGTCACCCTCGAGCTGACGGGCATTACCGTGTCGTTCAATAGTGCGCCGCTGGAATGGTGGCTCTCCCTTCCCATTATTGTCATTTATCCTCTGCTGTTTGGCTGGGTCAGCTACCAGACGGCAACCAAACTGGCGGAACATAAACGCAGGTTGCAGGTCATGAGTACCCGCGACGGCATGACGGGCGTGTATAACCGACGTCATTGGGAAACTATGTTACGCAATGAATTTGATAACTGTCGGCGGCATAATCGCGATGCAACGTTACTGATTATCGATATCGACCATTTCAAGAGCATCAACGATACCTGGGGCCATGATGTGGGCGATGAAGCGATTGTGGCGCTTACCCGACAGTTACAAATTACCCTGCGCGGTAGCGATGTGATTGGTCGGTTTGGCGGCGATGAGTTTGCAGTAATCATGTCCGGTACGCCAGCTGAGAGCGCCATTACCGCCATGTTACGGGTGCATGAAGGGCTAAATACATTACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGA", + "dna_sequence_length": 1116, + "functions": [ + "diguanylate cyclase, cellulose regualtor" + ], + "id": "CDS_379", + "location": [ + [ + "NC_000913", + 403703, + "+", + 1116 + ] + ], + "md5": "90f3b94554472ab1b53a148b3289b4ac", + "parent_gene": "", + "protein_md5": "33221920300f1b251518b225a4291ac6", + "protein_translation": "MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA", + "protein_translation_length": 371, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001338" + ], + [ + "gene_synonym", + "ECK0381" + ], + [ + "gene_synonym", + "EcoGene:EG10769" + ], + [ + "gene_synonym", + "GI:16128371" + ], + [ + "gene_synonym", + "GeneID:945034" + ], + [ + "gene_synonym", + "JW0377" + ], + [ + "gene_synonym", + "NP_414920.1" + ], + [ + "gene_synonym", + "Pro2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9L8" + ], + [ + "gene_synonym", + "b0386" + ], + [ + "gene_synonym", + "pro" + ], + [ + "gene_synonym", + "proC" + ] + ], + "dna_sequence": "ATGGAAAAGAAAATCGGTTTTATTGGCTGCGGCAATATGGGAAAAGCCATTCTCGGCGGTCTGATTGCCAGCGGTCAGGTGCTTCCAGGGCAAATCTGGGTATACACCCCCTCCCCGGATAAAGTCGCCGCCCTGCATGACCAGTTCGGCATCAACGCCGCAGAATCGGCGCAAGAAGTGGCGCAAATCGCCGACATCATTTTTGCTGCCGTTAAACCTGGCATCATGATTAAAGTGCTTAGCGAAATCACCTCCAGCCTGAATAAAGACTCTCTGGTCGTTTCTATTGCTGCAGGTGTCACGCTCGACCAGCTTGCCCGCGCGCTGGGCCATGACCGGAAAATTATCCGCGCCATGCCGAACACTCCCGCACTGGTTAATGCCGGGATGACCTCCGTAACGCCAAACGCGCTGGTAACCCCAGAAGATACCGCTGATGTGCTGAATATTTTCCGCTGCTTTGGCGAAGCGGAAGTAATTGCTGAGCCGATGATCCACCCGGTGGTCGGTGTGAGCGGTTCTTCGCCAGCCTACGTATTTATGTTTATCGAAGCGATGGCCGACGCCGCCGTGCTGGGCGGGATGCCACGCGCCCAGGCGTATAAATTTGCCGCTCAGGCGGTAATGGGTTCCGCAAAAATGGTGCTGGAAACGGGAGAACATCCGGGGGCACTGAAAGATATGGTCTGCTCACCGGGAGGCACCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGA", + "dna_sequence_length": 810, + "functions": [ + "pyrroline-5-carboxylate reductase, NAD(P)-binding" + ], + "id": "CDS_380", + "location": [ + [ + "NC_000913", + 405644, + "-", + 810 + ] + ], + "md5": "1841b75453b82c3a3a8b015f4c4df6b9", + "parent_gene": "", + "protein_md5": "ad28a8bffcd43132168d795293745983", + "protein_translation": "MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001344" + ], + [ + "gene_synonym", + "ECK0382" + ], + [ + "gene_synonym", + "EcoGene:EG13176" + ], + [ + "gene_synonym", + "GI:90111127" + ], + [ + "gene_synonym", + "GeneID:945033" + ], + [ + "gene_synonym", + "JW0378" + ], + [ + "gene_synonym", + "NP_414921.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8D3" + ], + [ + "gene_synonym", + "b0387" + ], + [ + "gene_synonym", + "yaiI" + ] + ], + "dna_sequence": "ATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCAGGTTTCGACGTTGCCGATAACGAAATTGTCCGGCAGTGTGAAGCGGGCGATTTGGTGATCACCGCAGATATACCTTTGGCTGCTGAAGCCATCGAGAAAGGCGCTGCGGCGCTTAATCCGCGCGGCGAACGTTACACGCCAGCGACCATTCGTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAA", + "dna_sequence_length": 459, + "functions": [ + "UPF0178 family protein" + ], + "id": "CDS_381", + "location": [ + [ + "NC_000913", + 405764, + "+", + 459 + ] + ], + "md5": "c50230092baffba5a8eaecf07d3d7bad", + "parent_gene": "", + "protein_md5": "2990862072e39b1733ed4503093023ad", + "protein_translation": "MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001353" + ], + [ + "gene_synonym", + "ECK0383" + ], + [ + "gene_synonym", + "EcoGene:EG10082" + ], + [ + "gene_synonym", + "GI:16128373" + ], + [ + "gene_synonym", + "GeneID:945031" + ], + [ + "gene_synonym", + "JW0379" + ], + [ + "gene_synonym", + "NP_414922.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6E1" + ], + [ + "gene_synonym", + "aroL" + ], + [ + "gene_synonym", + "b0388" + ] + ], + "dna_sequence": "ATGACACAACCTCTTTTTCTGATCGGGCCTCGGGGCTGTGGTAAAACAACGGTCGGAATGGCCCTTGCCGATTCGCTTAACCGTCGGTTTGTCGATACCGATCAGTGGTTGCAATCACAGCTCAATATGACGGTCGCGGAGATCGTCGAAAGGGAAGAGTGGGCGGGATTTCGCGCCAGAGAAACGGCGGCGCTGGAAGCGGTAACTGCGCCATCCACCGTTATCGCTACAGGCGGCGGCATTATTCTGACGGAATTTAATCGTCACTTCATGCAAAATAACGGGATCGTGGTTTATTTGTGTGCGCCAGTATCAGTCCTGGTTAACCGACTGCAAGCTGCACCGGAAGAAGATTTACGGCCAACCTTAACGGGAAAACCGCTGAGCGAAGAAGTTCAGGAAGTGCTGGAAGAACGCGATGCGCTATATCGCGAAGTTGCGCATATTATCATCGACGCAACAAACGAACCCAGCCAGGTGATTTCTGAAATTCGCAGCGCCCTGGCACAGACGATCAATTGTTGA", + "dna_sequence_length": 525, + "functions": [ + "shikimate kinase II" + ], + "id": "CDS_382", + "location": [ + [ + "NC_000913", + 406405, + "+", + 525 + ] + ], + "md5": "c5496ef0ee724057c822333738d57a15", + "parent_gene": "", + "protein_md5": "35629e2fbd76b27ac71366f4d32bce1b", + "protein_translation": "MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC", + "protein_translation_length": 174, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001355" + ], + [ + "gene_synonym", + "ECK0384" + ], + [ + "gene_synonym", + "EcoGene:EG11093" + ], + [ + "gene_synonym", + "GI:16128374" + ], + [ + "gene_synonym", + "GeneID:945043" + ], + [ + "gene_synonym", + "JW0380" + ], + [ + "gene_synonym", + "NP_414923.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN5" + ], + [ + "gene_synonym", + "b0389" + ], + [ + "gene_synonym", + "yaiA" + ] + ], + "dna_sequence": "ATGCCAACGAAACCGCCTTATCCTCGTGAAGCATATATAGTGACGATTGAAAAAGGAAAGCCAGGACAGACGGTAACCTGGTACCAACTCAGAGCCGATCATCCTAAACCAGACTCGTTGATCAGTGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGA", + "dna_sequence_length": 192, + "functions": [ + "OxyR-regulated conserved protein" + ], + "id": "CDS_383", + "location": [ + [ + "NC_000913", + 406979, + "+", + 192 + ] + ], + "md5": "655fff70d9d1aab041fd3e84e898e3c0", + "parent_gene": "", + "protein_md5": "76276175b24bc2a79c2eb244dd5c3de7", + "protein_translation": "MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001357" + ], + [ + "gene_synonym", + "ECK0385" + ], + [ + "gene_synonym", + "EcoGene:EG10083" + ], + [ + "gene_synonym", + "GI:16128375" + ], + [ + "gene_synonym", + "GeneID:945045" + ], + [ + "gene_synonym", + "JW0381" + ], + [ + "gene_synonym", + "NP_414924.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE28" + ], + [ + "gene_synonym", + "aroM" + ], + [ + "gene_synonym", + "b0390" + ] + ], + "dna_sequence": "ATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGAAGTGCTCGATAATCAGGGTTATGACGTCATTTTATTAATGAGTACAGCAAACATTAGTAGTATGACTGCGCGTAATACGATCTTTCTTGAGCCGTCGCGAATATTGCCTCCACTGGTTTCCTCTATTGTTGAAGATCATCAGGTGGGGGTTATCGTTCCGGTTGAGGAGATGCTGCCCGTTCAGGCGCAAAAATGGCAAATTTTGCAGAAATCGCCGGTATTTTCATTGGGTAACCCCATTCATGATTCAGAACAAAAAATCATTGATGCCGGGAAAGAATTACTGGCAAAAGGGGCTGATGTCATCATGCTGGATTGTTTAGGATTTCACCAACGTCATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCTGCGGAATTACTGGTGTAA", + "dna_sequence_length": 678, + "functions": [ + "AroM family protein" + ], + "id": "CDS_384", + "location": [ + [ + "NC_000913", + 407428, + "+", + 678 + ] + ], + "md5": "44c4bc9ffba7a5ef6eb0f9cc2dfb462a", + "parent_gene": "", + "protein_md5": "2f013e09d86676b638bfa36d3e9cb55f", + "protein_translation": "MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001360" + ], + [ + "gene_synonym", + "ECK0386" + ], + [ + "gene_synonym", + "EcoGene:EG12159" + ], + [ + "gene_synonym", + "GI:16128376" + ], + [ + "gene_synonym", + "GeneID:945048" + ], + [ + "gene_synonym", + "JW0382" + ], + [ + "gene_synonym", + "NP_414925.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C037" + ], + [ + "gene_synonym", + "b0391" + ], + [ + "gene_synonym", + "yaiE" + ] + ], + "dna_sequence": "ATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAA", + "dna_sequence_length": 285, + "functions": [ + "UPF0345 family protein" + ], + "id": "CDS_385", + "location": [ + [ + "NC_000913", + 408177, + "+", + 285 + ] + ], + "md5": "52e805a0a5885ed77b3dd71c5d27e814", + "parent_gene": "", + "protein_md5": "2803dfeb0ae7ed649845703d52f5fbb8", + "protein_translation": "MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001363" + ], + [ + "gene_synonym", + "ECK0387" + ], + [ + "gene_synonym", + "EcoGene:EG14282" + ], + [ + "gene_synonym", + "GeneID:945423" + ], + [ + "gene_synonym", + "JW0383" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75704" + ], + [ + "gene_synonym", + "b0392" + ], + [ + "gene_synonym", + "ykiA" + ] + ], + "dna_sequence": "GATATTGTTGCGGAACTGGCTACGATAAAAGATAAATCAGATGATGAATGGTGGCGTGCATTGCTGCAAAGTCGCAATGATCATTTACGCCAAACGGCATTGCGCAACGCACATACCCCGGCGTTGTTGTTAACGACATTGACTGAGCCTCAGGATCGGTCGCTGGCTATTAATAATCCACAGCTGGCTGCCGATGTGAAAACGGCGTGGTTAAAAGAGGATCCATCATTACTCTTATTTGTCGAACAACCCGATCTTTCGCTGTTACGTGATTTAGTGAAAACCGGGGCAACGCGGAAAATTCGCAGTGAAGCGCGTCACCGGCTTGAGGAAAAACAATGA", + "dna_sequence_length": 342, + "id": "CDS_386", + "location": [ + [ + "NC_000913", + 408609, + "+", + 342 + ] + ], + "md5": "7e03aceed6fded2209de3d9bead6456c", + "parent_gene": "", + "protein_md5": "51981eba255638aa8737197aa924a222", + "protein_translation": "DIVAELATIKDKSDDEWWRALLQSRNDHLRQTALRNAHTPALLLTTLTEPQDRSLAINNPQLAADVKTAWLKEDPSLLLFVEQPDLSLLRDLVKTGATRKIRSEARHRLEEKQ", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001366" + ], + [ + "gene_synonym", + "ECK0388" + ], + [ + "gene_synonym", + "EcoGene:EG12158" + ], + [ + "gene_synonym", + "GI:16128378" + ], + [ + "gene_synonym", + "GeneID:948585" + ], + [ + "gene_synonym", + "JW0384" + ], + [ + "gene_synonym", + "NP_414927.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36767" + ], + [ + "gene_synonym", + "b0393" + ], + [ + "gene_synonym", + "rdgC" + ], + [ + "gene_synonym", + "yaiD" + ] + ], + "dna_sequence": "ATGCTGTGGTTCAAAAATTTAATGGTTTACCGTCTTAGCCGCGAGATTTCGCTGCGTGCAGAAGAGATGGAAAAACAGCTAGCCTCGATGGCATTTACCCCATGCGGCAGCCAGGACATGGCGAAGATGGGCTGGGTTCCTCCGATGGGATCGCACAGCGATGCGTTAACGCACGTTGCCAATGGTCAAATTGTTATCTGCGCGCGCAAAGAAGAAAAAATCCTCCCGTCTCCGGTGATTAAACAGGCGCTGGAAGCGAAAATCGCCAAACTGGAAGCGGAACAGGCGCGTAAGCTGAAGAAAACCGAAAAAGATTCGCTGAAAGACGAAGTGCTGCACTCTCTGCTGCCGCGTGCTTTCAGCCGTTTTAGCCAGACAATGATGTGGATCGACACGGTTAACGGTTTGATTATGGTGGACTGCGCCAGTGCCAAAAAAGCGGAAGATACGCTGGCATTACTGCGTAAAAGCCTGGGGTCGTTACCGGTTGTACCATTGAGCATGGAAAACCCGATTGAACTGACGCTGACCGAATGGGTTCGCTCCGGTAGTGCGGCACAGGGCTTCCAGCTGCTTGATGAAGCCGAGCTGAAATCGTTGCTGGAAGATGGCGGCGTGATCCGCGCGAAGAAACAAGATCTGACCAGCGAAGAGATCACCAATCACATTGAAGCCGGAAAAGTGGTGACTAAACTGGCGCTCGACTGGCAGCAGCGCATTCAGTTTGTGATGTGCGACGATGGTTCGCTCAAGCGTCTGAAGTTCTGCGACGAGCTGCGCGATCAAAACGAAGATATCGACCGTGAAGATTTCGCCCAGCGTTTTGATGCCGATTTCATCCTGATGACTGGTGAACTGGCAGCGTTAATTCAAAACCTGATTGAAGGATTAGGTGGCGAAGCACAACGTTAA", + "dna_sequence_length": 912, + "functions": [ + "nucleoid-associated ssDNA and dsDNA binding protein", + "competitive inhibitor of RecA function" + ], + "id": "CDS_387", + "location": [ + [ + "NC_000913", + 410019, + "-", + 912 + ] + ], + "md5": "e1a2bc40bf41cd0f0e210852219b7cde", + "parent_gene": "", + "protein_md5": "cac643010e273e86918ad3bb0a83df4c", + "protein_translation": "MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001372" + ], + [ + "gene_synonym", + "ECK0389" + ], + [ + "gene_synonym", + "EcoGene:EG11288" + ], + [ + "gene_synonym", + "GI:90111128" + ], + [ + "gene_synonym", + "GeneID:949086" + ], + [ + "gene_synonym", + "JW0385" + ], + [ + "gene_synonym", + "NP_414928.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23917" + ], + [ + "gene_synonym", + "b0394" + ], + [ + "gene_synonym", + "mak" + ], + [ + "gene_synonym", + "yajF" + ] + ], + "dna_sequence": "GTGCGTATAGGTATCGATTTAGGCGGCACCAAAACTGAAGTGATTGCACTGGGCGATGCAGGGGAGCAGTTGTACCGCCATCGTCTGCCCACGCCGCGTGATGATTACCGGCAGACTATTGAAACGATCGCCACGTTGGTTGATATGGCGGAGCAGGCGACGGGGCAGCGCGGAACGGTAGGTATGGGCATTCCTGGCTCAATTTCGCCTTACACCGGTGTGGTGAAGAATGCCAATTCAACCTGGCTCAACGGTCAGCCATTCGATAAAGACTTAAGCGCGAGGTTGCAGCGGGAAGTGCGGCTGGCAAATGACGCTAACTGTCTGGCGGTTTCAGAAGCAGTAGATGGCGCGGCAGCGGGAGCGCAGACGGTATTTGCCGTGATTATCGGCACGGGATGCGGCGCGGGCGTGGCATTCAATGGGCGGGCGCATATCGGCGGCAATGGCACGGCAGGTGAGTGGGGACACAATCCGCTACCGTGGATGGACGAAGACGAACTGCGTTATCGCGAGGAAGTCCCTTGTTATTGCGGTAAACAAGGTTGTATTGAAACCTTTATTTCGGGCACGGGATTCGCGATGGATTATCGTCGTTTGAGCGGACATGCGCTGAAAGGCAGTGAAATTATCCGCCTGGTTGAAGAAAGCGATCCGGTAGCGGAACTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCGTTTATATCAAACGGTTGGGCAGTTGATTAAACAATTTGTCTTCGGCGGCGAATGTGAAACGCCGGTGCGTAAGGCGAAGCACGGTGATTCCAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAA", + "dna_sequence_length": 909, + "functions": [ + "manno(fructo)kinase" + ], + "id": "CDS_388", + "location": [ + [ + "NC_000913", + 410144, + "+", + 909 + ] + ], + "md5": "63859aa9dccaa63bc6eeb7a958c01b09", + "parent_gene": "", + "protein_md5": "5a133050dfea0ab1f4bb447ccb18099b", + "protein_translation": "MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001378" + ], + [ + "gene_synonym", + "ECK0390" + ], + [ + "gene_synonym", + "EcoGene:EG10060" + ], + [ + "gene_synonym", + "GI:49176018" + ], + [ + "gene_synonym", + "GeneID:949077" + ], + [ + "gene_synonym", + "JW0386" + ], + [ + "gene_synonym", + "NP_414930.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23910" + ], + [ + "gene_synonym", + "araJ" + ], + [ + "gene_synonym", + "b0396" + ] + ], + "dna_sequence": "ATGAAAAAAGTCATTTTATCTTTGGCTCTGGGCACGTTTGGTTTGGGGATGGCCGAATTTGGCATTATGGGCGTGCTCACGGAGCTGGCGCATAACGTAGGAATTTCGATTCCTGCCGCCGGGCATATGATCTCGTATTATGCACTGGGGGTGGTGGTCGGTGCGCCAATCATCGCACTCTTTTCCAGCCGCTACTCACTCAAACATATCTTGTTGTTTCTGGTGGCGTTGTGCGTCATTGGCAACGCCATGTTCACGCTCTCTTCGTCTTACCTGATGCTCGCCATTGGTCGGCTGGTATCCGGCTTTCCGCATGGCGCATTTTTTGGCGTCGGAGCGATCGTGTTATCAAAAATTATCAAACCCGGAAAAGTCACCGCCGCCGTGGCGGGGATGGTTTCCGGGATGACAGTCGCCAATTTGCTGGGCATTCCGCTGGGAACGTATTTAAGTCAGGAATTTAGCTGGCGTTACACCTTTTTATTGATCGCTGTTTTTAATATTGCGGTGATGGCATCGGTCTATTTTTGGGTGCCAGATATTCGCGACGAGGCGAAAGGAAATCTGCGCGAACAATTTCACTTTTTGCGCAGCCCGGCCCCGTGGTTAATTTTCGCCGCCACGATGTTTGGCAACGCAGGTGTGTTTGCCTGGTTCAGCTACGTAAAGCCATACATGATGTTTATTTCCGGTTTTTCGGAAACGGCGATGACCTTTATTATGATGTTAGTTGGGCTAGGGATGGTGCTGGGAAATATGCTAAGTGGCAGGATTTCAGGACGTTATTCACCACTGCGCATTGCAGCAGTGACTGACTTTATAATTGTACTGGCACTGCTGATGCTCTTTTTCTGCGGCGGCATGAAAACAACGTCGCTTATTTTTGCTTTTATTTGTTGCGCGGGATTATTTGCCCTTTCAGCACCGCTACAAATATTGTTACTACAAAACGCCAAAGGCGGAGAGTTATTAGGTGCCGCAGGTGGGCAAATAGCGTTTAACCTCGGTAGCGCCGTCGGCGCATATTGCGGAGGTATGATGCTGACGCTGGGGCTGGCATATAATTACGTGGCGCTGCCTGCCGCCCTGCTTTCGTTTGCTGCGATGTCGTCGTTGCTGCTGTATGGTCGCTATAAGCGCCAGCAAGCGGCGGATACTCCGGTGCTGGCGAAACCACTGGGGTAG", + "dna_sequence_length": 1185, + "functions": [ + "L-arabinose-inducible putative transporter, MFS family" + ], + "id": "CDS_389", + "location": [ + [ + "NC_000913", + 412481, + "-", + 1185 + ] + ], + "md5": "267e636a8f0f4c47e3c1287d37ca905a", + "parent_gene": "", + "protein_md5": "2fbb6699c96b4befdcb46b78845c57e8", + "protein_translation": "MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001381" + ], + [ + "gene_synonym", + "ECK0391" + ], + [ + "gene_synonym", + "EcoGene:EG10927" + ], + [ + "gene_synonym", + "GI:16128382" + ], + [ + "gene_synonym", + "GeneID:949076" + ], + [ + "gene_synonym", + "JW0387" + ], + [ + "gene_synonym", + "NP_414931.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13458" + ], + [ + "gene_synonym", + "b0397" + ], + [ + "gene_synonym", + "rmuA" + ], + [ + "gene_synonym", + "sbcC" + ] + ], + "dna_sequence": "ATGAAAATTCTCAGCCTGCGCCTGAAAAACCTGAACTCATTAAAAGGCGAATGGAAGATTGATTTCACCCGCGAGCCGTTCGCCAGCAACGGGCTGTTTGCTATTACCGGCCCAACAGGTGCGGGGAAAACCACCCTGCTGGACGCCATTTGTCTGGCGCTGTATCACGAAACTCCGCGTCTCTCTAACGTTTCACAATCGCAAAATGATCTCATGACCCGCGATACCGCCGAATGTCTGGCGGAGGTGGAGTTTGAAGTGAAAGGTGAAGCGTACCGTGCATTCTGGAGCCAGAATCGGGCGCGTAACCAACCCGACGGTAATTTGCAGGTGCCACGCGTAGAGCTGGCGCGCTGCGCCGACGGCAAAATTCTCGCCGACAAAGTGAAAGATAAGCTGGAACTGACAGCGACGTTAACCGGGCTGGATTACGGGCGCTTCACCCGTTCGATGCTGCTTTCGCAGGGGCAATTTGCTGCCTTCCTGAATGCCAAACCCAAAGAACGCGCGGAATTGCTCGAGGAGTTAACCGGCACTGAAATCTACGGGCAAATCTCGGCGATGGTTTTTGAGCAGCACAAATCGGCCCGCACAGAGCTGGAGAAGCTGCAAGCGCAGGCCAGCGGCGTCACGTTGCTCACGCCGGAACAAGTGCAATCGCTGACAGCGAGTTTGCAGGTACTTACTGACGAAGAAAAACAGTTAATTACCGCGCAGCAGCAAGAACAACAATCGCTAAACTGGTTAACGCGTCAGGACGAATTGCAGCAAGAAGCCAGCCGCCGTCAGCAGGCCTTGCAACAGGCGTTAGCCGAAGAAGAAAAAGCGCAACCTCAACTGGCGGCGCTTAGTCTGGCACAACCGGCACGAAATCTTCGTCCACACTGGGAACGCATCGCAGAACACAGCGCGGCGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGCATTCGCCACCACGCGGCGAAGCAGTCAGCAGAATTACAGCAGCAGCAACAAAGCCTGAATACCTGGTTACAGGAACACGACCGCTTCCGTCAGTGGAACAACGAACCGGCGGGTTGGCGTGCGCAGTTCTCCCAACAAACCAGCGATCGCGAGCATCTGCGGCAATGGCAGCAACAGTTAACCCATGCTGAGCAAAAACTTAATGCGCTTGCGGCGATCACGTTGACGTTAACCGCCGATGAAGTTGCTACCGCCCTGGCGCAACATGCTGAGCAACGCCCACTGCGTCAGCACCTGGTCGCGCTGCATGGACAGATTGTTCCCCAACAAAAACGTCTGGCGCAGTTACAGGTCGCTATCCAGAATGTCACGCAAGAACAGACGCAACGTAACGCCGCACTTAACGAAATGCGCCAGCGTTATAAAGAAAAGACGCAGCAACTTGCCGATGTGAAAACCATTTGCGAGCAGGAAGCGCGCATCAAAACGCTGGAAGCTCAACGTGCACAGTTACAGGCGGGTCAGCCTTGCCCACTTTGTGGTTCCACCAGCCACCCGGCGGTCGAGGCGTATCAGGCGCTGGAGCCTGGCGTTAATCAGTCTCGATTACTGGCGCTGGAAAACGAAGTTAAAAAGCTCGGTGAAGAAGGTGCGACGCTACGTGGGCAACTGGACGCCATAACAAAGCAGCTTCAGCGTGATGAAAACGAAGCGCAAAGCCTCCGACAAGATGAGCAAGCACTTACTCAACAATGGCAAGCCGTCACGGCCAGCCTCAATATCACCTTGCAGCCACTGGACGATATTCAACCGTGGCTGGATGCACAAGATGAGCACGAACGCCAGCTGCGGTTACTCAGCCAACGGCATGAATTACAAGGGCAGATTGCCGCGCATAATCAGCAAATTATCCAGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATTGACGGGTTATGCACTGACATTGCCACAGGAAGATGAAGAAGAGAGCTGGTTGGCGACACGTCAGCAAGAAGCGCAGAGCTGGCAGCAACGCCAGAACGAATTAACCGCGCTGCAAAACCGTATTCAGCAGCTGACGCCGATTCTGGAAACGTTGCCGCAAAGTGATGAACTCCCGCACTGCGAAGAAACTGTGGTATTGGAAAACTGGCGGCAGGTACATGAACAATGTCTCGCATTACACAGCCAGCAGCAGACGTTACAGCAACAGGATGTTCTGGCGGCGCAAAGTCTGCAAAAAGCCCAGGCGCAGTTTGACACCGCGCTACAGGCCAGCGTCTTTGACGATCAGCAGGCGTTCCTTGCGGCGCTAATGGATGAACAAACACTAACGCAGCTGGAACAGCTCAAGCAGAATCTGGAAAACCAGCGCCGTCAGGCGCAAACTCTGGTCACTCAGACAGCAGAAACGCTGGCACAGCATCAACAACACCGACCTGACGACGGGTTGGCTCTCACTGTGACGGTGGAGCAGATTCAGCAAGAGTTAGCGCAAACTCACCAAAAGTTGCGTGAAAACACCACGAGTCAAGGCGAGATTCGCCAGCAGCTGAAGCAGGATGCAGATAACCGTCAGCAACAACAAACCTTAATGCAGCAAATTGCTCAAATGACGCAGCAGGTTGAGGACTGGGGATATCTGAATTCGCTAATAGGTTCCAAAGAGGGCGATAAATTCCGCAAGTTTGCCCAGGGGCTGACGCTGGATAATTTAGTCCATCTCGCTAATCAGCAACTTACCCGGCTGCACGGGCGCTATCTGTTACAGCGCAAAGCCAGCGAGGCGCTGGAAGTCGAGGTTGTTGATACCTGGCAGGCAGATGCGGTACGCGATACCCGTACCCTTTCCGGCGGCGAAAGTTTCCTCGTTAGTCTGGCGCTGGCGCTGGCGCTTTCGGATCTGGTCAGCCATAAAACACGTATTGACTCGCTGTTCCTTGATGAAGGTTTTGGCACGCTGGATAGCGAAACGCTGGATACCGCCCTTGATGCGCTGGATGCCCTGAACGCCAGTGGCAAAACCATCGGTGTGATTAGCCACGTAGAAGCGATGAAAGAGCGTATTCCGGTGCAGATCAAAGTGAAAAAGATCAACGGCCTGGGCTACAGCAAACTGGAAAGTACGTTTGCAGTGAAATAA", + "dna_sequence_length": 3147, + "functions": [ + "exonuclease, dsDNA, ATP-dependent" + ], + "id": "CDS_390", + "location": [ + [ + "NC_000913", + 415753, + "-", + 3147 + ] + ], + "md5": "e5d9635b4cbc529199cb4a35840d17f5", + "parent_gene": "", + "protein_md5": "3b76eedb8f516a62131d230ebc79083e", + "protein_translation": "MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK", + "protein_translation_length": 1048, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001383" + ], + [ + "gene_synonym", + "ECK0392" + ], + [ + "gene_synonym", + "EcoGene:EG11094" + ], + [ + "gene_synonym", + "GI:16128383" + ], + [ + "gene_synonym", + "GeneID:945049" + ], + [ + "gene_synonym", + "JW0388" + ], + [ + "gene_synonym", + "NP_414932.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG76" + ], + [ + "gene_synonym", + "b0398" + ], + [ + "gene_synonym", + "sbcD" + ], + [ + "gene_synonym", + "yajA" + ] + ], + "dna_sequence": "ATGCGCATCCTTCACACCTCAGACTGGCATCTCGGCCAGAACTTCTACAGTAAAAGCCGCGAAGCTGAACATCAGGCTTTTCTTGACTGGCTGCTGGAGACAGCACAAACCCATCAGGTGGATGCGATTATTGTTGCCGGTGATGTTTTCGATACCGGCTCGCCGCCCAGTTACGCCCGCACGTTATACAACCGTTTTGTTGTCAATTTACAGCAAACTGGCTGTCATCTGGTGGTACTGGCAGGAAACCATGACTCGGTCGCCACGCTGAATGAATCGCGCGATATCATGGCGTTCCTCAATACTACCGTGGTCGCCAGCGCCGGACATGCGCCGCAAATCTTGCCTCGTCGCGACGGGACGCCAGGCGCAGTGCTGTGCCCCATTCCGTTTTTACGTCCGCGTGACATTATTACCAGCCAGGCGGGGCTTAACGGTATTGAAAAACAGCAGCATTTACTGGCAGCGATTACCGATTATTACCAACAACACTATGCCGATGCCTGCAAACTGCGCGGCGATCAGCCTCTGCCCATCATCGCCACGGGACATTTAACGACCGTGGGGGCCAGTAAAAGTGACGCCGTGCGTGACATTTATATTGGCACGCTGGACGCGTTTCCGGCACAAAACTTTCCACCAGCCGACTACATCGCGCTCGGGCATATTCACCGCGCACAGATTATTGGCGGCATGGAACATGTTCGCTATTGCGGCTCCCCCATTCCACTGAGTTTTGATGAATGCGGTAAGAGTAAATATGTCCATCTGGTGACATTTTCAAACGGCAAATTAGAGAGCGTGGAAAACCTGAACGTACCGGTAACGCAACCCATGGCAGTGCTGAAAGGCGATCTGGCGTCGATTACCGCACAGCTGGAACAGTGGCGCGATGTATCGCAGGAGCCACCTGTCTGGCTGGATATCGAAATCACTACTGATGAGTATCTGCATGATATTCAGCGCAAAATCCAGGCATTAACCGAATCATTGCCTGTCGAAGTATTGCTGGTACGTCGGAGTCGTGAACAGCGCGAGCGTGTGTTAGCCAGCCAACAGCGTGAAACCCTCAGCGAACTCAGCGTCGAAGAGGTGTTCAATCGCCGTCTGGCACTGGAAGAACTGGATGAATCGCAGCAGCAACGTCTGCAGCATCTTTTCACCACGACGTTGCATACCCTCGCCGGAGAACACGAAGCATGA", + "dna_sequence_length": 1203, + "functions": [ + "exonuclease, dsDNA, ATP-dependent" + ], + "id": "CDS_391", + "location": [ + [ + "NC_000913", + 416952, + "-", + 1203 + ] + ], + "md5": "7248df543e24a698edbecd69ef08b9cc", + "parent_gene": "", + "protein_md5": "2484503ea26833aba591bd8c06223adb", + "protein_translation": "MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001389" + ], + [ + "gene_synonym", + "ECK0393" + ], + [ + "gene_synonym", + "EcoGene:EG10728" + ], + [ + "gene_synonym", + "GI:16128384" + ], + [ + "gene_synonym", + "GeneID:945046" + ], + [ + "gene_synonym", + "JW0389" + ], + [ + "gene_synonym", + "NP_414933.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ5" + ], + [ + "gene_synonym", + "b0399" + ], + [ + "gene_synonym", + "phoB" + ], + [ + "gene_synonym", + "phoRc" + ] + ], + "dna_sequence": "ATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAATGGCTTTCAGCCGGTCGAAGCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGATGGCGGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAACCCGCTTTTAA", + "dna_sequence_length": 690, + "functions": [ + "response regulator in two-component regulatory system with PhoR" + ], + "id": "CDS_392", + "location": [ + [ + "NC_000913", + 417142, + "+", + 690 + ] + ], + "md5": "f45ed64686f854e8ab7c4d437b6ebeaf", + "parent_gene": "", + "protein_md5": "0e45b31dbd48b4685a1831b0524fc60d", + "protein_translation": "MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001391" + ], + [ + "gene_synonym", + "ECK0394" + ], + [ + "gene_synonym", + "EcoGene:EG10733" + ], + [ + "gene_synonym", + "GI:16128385" + ], + [ + "gene_synonym", + "GeneID:945044" + ], + [ + "gene_synonym", + "JW0390" + ], + [ + "gene_synonym", + "NP_414934.1" + ], + [ + "gene_synonym", + "R1pho" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08400" + ], + [ + "gene_synonym", + "b0400" + ], + [ + "gene_synonym", + "nmpB" + ], + [ + "gene_synonym", + "phoR" + ], + [ + "gene_synonym", + "phoR1" + ] + ], + "dna_sequence": "GTGCTGGAACGGCTGTCGTGGAAAAGGCTGGTGCTGGAGCTGCTACTTTGCTGCCTCCCGGCTTTCATCCTGGGTGCATTTTTTGGTTACCTGCCCTGGTTTTTGCTGGCATCGGTAACAGGACTGCTTATCTGGCATTTCTGGAATTTATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGATGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTGACCACGGAAGAGGGCGGTATTTTCTGGTGTAACGGTCTGGCGCAACAAATTCTTGGTTTGCGCTGGCCGGAAGATAACGGGCAGAACATCCTTAACCTACTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTCAACACCGGGCGGCATCTGGAAATTCGCGTCATGCCTTATACCCACAAACAGTTGCTGATGGTGGCGCGTGATGTCACGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGTTACGTACGCCATTGACCGTGTTACAGGGTTACCTGGAGATGATGAATGAGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGACATTTACCTTTGAGATAGATAACGGCCTCAAGGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGATTAGGGTTAGCGATCGTGAAACATGCTGTGAATCATCACGAAAGTCGCCTGAATATTGAGAGTACAGTAGGAAAAGGAACACGTTTCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAA", + "dna_sequence_length": 1296, + "functions": [ + "sensory histidine kinase in two-component regulatory system with PhoB" + ], + "id": "CDS_393", + "location": [ + [ + "NC_000913", + 417889, + "+", + 1296 + ] + ], + "md5": "cc80039cc6070a7aef4ad0eada299390", + "parent_gene": "", + "protein_md5": "230fc434f85c4660afff084d840e3f19", + "protein_translation": "MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD", + "protein_translation_length": 431, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001394" + ], + [ + "gene_synonym", + "ECK0395" + ], + [ + "gene_synonym", + "EcoGene:EG12168" + ], + [ + "gene_synonym", + "GI:16128386" + ], + [ + "gene_synonym", + "GeneID:945042" + ], + [ + "gene_synonym", + "JW0391" + ], + [ + "gene_synonym", + "NP_414935.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD99" + ], + [ + "gene_synonym", + "b0401" + ], + [ + "gene_synonym", + "brnQ" + ], + [ + "gene_synonym", + "hrbA" + ] + ], + "dna_sequence": "ATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGGCGAACACGTCTGGACTGCGGCATTCGGCTTCCTCATTACTGCCGTTGGCCTGCCGGTATTAACGGTAGTGGCGCTGGCAAAAGTTGGCGGCGGTGTTGACAGCCTCAGCACGCCAATCGGTAAAGTCGCTGGCGTACTGCTGGCAACGGTTTGTTACCTGGCGGTGGGGCCGCTTTTCGCTACGCCGCGTACAGCTACCGTTTCCTTTGAAGTGGGGATTGCGCCGCTGACGGGTGATTCCGCGCTGCCGCTGTTTATCTACAGCCTGGTCTATTTCGCTATCGTTATTCTGGTTTCGCTCTATCCGGGCAAGCTGCTGGATACCGTGGGCAACTTCCTTGCGCCGCTGAAAATTATCGCGCTGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTGACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCTGGTCGATCAGTCTGCAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATCGCACTGGTTGTATTAAGTTTTACACGCTCATGGTGGCATAATTCGTCCCGCGTGATTGCTCCGCCGATGTTTATCAGCCTGCTTTTTGGTATTCTCGACGGGATCAAAGCATCTGCATTCAGCGATATCTTACCGTCCTGGGCGCAGCGTTTACCGCTGGCCGAACAAGGTCTGGCGTGGTTAATGCCAACAGTGGTGATGGTGGTTCTGGCCATTATCTGGGATCGCGCGGCAGGTCGTCAGGTGACCTCCAGCGCTCACTAA", + "dna_sequence_length": 1320, + "functions": [ + "branched-chain amino acid transport system 2 carrier protein", + "LIV-II transport system for Ile, Leu, and Val" + ], + "id": "CDS_394", + "location": [ + [ + "NC_000913", + 419591, + "+", + 1320 + ] + ], + "md5": "782426df41a0f63a4ad2f2705f46e19e", + "parent_gene": "", + "protein_md5": "bab745c09ee80710ad1f5407e19f9037", + "protein_translation": "MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001398" + ], + [ + "gene_synonym", + "ECK0396" + ], + [ + "gene_synonym", + "EcoGene:EG13609" + ], + [ + "gene_synonym", + "GI:16128387" + ], + [ + "gene_synonym", + "GeneID:945050" + ], + [ + "gene_synonym", + "JW5055" + ], + [ + "gene_synonym", + "NP_414936.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAE2" + ], + [ + "gene_synonym", + "b0402" + ], + [ + "gene_synonym", + "hisY" + ], + [ + "gene_synonym", + "proY" + ], + [ + "gene_synonym", + "yajM" + ] + ], + "dna_sequence": "ATGGAAAGTAAGAACAAGCTAAAGCGTGGGCTAAGTACCCGCCACATACGCTTTATGGCACTGGGTTCAGCAATTGGCACCGGGCTGTTTTACGGTTCGGCAGACGCCATCAAAATGGCCGGTCCGAGCGTGTTGTTGGCCTATATTATCGGTGGTATCGCGGCGTATATCATTATGCGTGCGCTGGGGGAAATGTCGGTACATAACCCGGCCGCCAGCTCTTTCTCGCGTTATGCGCAGGAAAACCTCGGCCCGCTGGCAGGTTACATTACCGGCTGGACCTACTGCTTTGAAATCCTTATTGTCGCCATCGCCGATGTGACCGCTTTTGGTATCTATATGGGTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTCGTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGCATTCTTAACTTTGTTGTGCTGACTGCTTCGCTGTCGGCAATTAACAGTGATGTATTTGGCGTAGGCCGTATGCTCCACGGTATGGCAGAGCAGGGCAGCGCGCCGAAAATTTTCAGCAAAACGTCGCGTCGCGGTATTCCGTGGGTTACGGTGCTGGTGATGACTACCGCGCTGCTGTTTGCGGTGTATCTGAACTACATCATGCCGGAAAACGTCTTCCTGGTGATCGCTTCGCTGGCAACCTTCGCCACGGTGTGGGTGTGGATTATGATCCTGCTGTCGCAAATTGCCTTCCGTCGCCGTTTGCCGCCAGAAGAAGTTAAGGCGCTGAAATTTAAAGTGCCGGGTGGGGTAGCAACGACCATCGGCGGGCTGATTTTCCTGCTCTTTATTATCGGGTTGATTGGTTATCACCCGGATACGCGTATCTCGCTGTATGTCGGTTTCGCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAA", + "dna_sequence_length": 1374, + "functions": [ + "proline-specific permease" + ], + "id": "CDS_395", + "location": [ + [ + "NC_000913", + 420986, + "+", + 1374 + ] + ], + "md5": "21272894cdb4e313e1b2380c20542b2a", + "parent_gene": "", + "protein_md5": "111a14e2f39729750ab3bfc622cd4712", + "protein_translation": "MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001402" + ], + [ + "gene_synonym", + "ECK0397" + ], + [ + "gene_synonym", + "EcoGene:EG10565" + ], + [ + "gene_synonym", + "GI:345452716" + ], + [ + "gene_synonym", + "GeneID:949131" + ], + [ + "gene_synonym", + "JW0393" + ], + [ + "gene_synonym", + "NP_414937.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21517" + ], + [ + "gene_synonym", + "b0403" + ], + [ + "gene_synonym", + "malZ" + ] + ], + "dna_sequence": "ATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACTGCTCATTACACTGTGGCTGACGGGCGAAGACCCACCGCAGCGCATTATGCTGCGTACAGAACACGATAACGAAGAAATGTCAGTACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATGGCGTGCGGCGATTGATCTCTCCAGCGGACAACCCCGGCGGCGTTACAGTTTCAAACTGCTGTGGCACGATCGCCAGCGTTGGTTTACACCGCAGGGCTTCAGCCGAATGCCGCCGGCACGACTGGAGCAGTTTGCCGTCGATGTACCGGATATCGGCCCACAATGGGCTGCGGATCAGATTTTTTATCAGATCTTCCCTGATCGTTTTGCGCGTAGTCTTCCTCGTGAAGCTGAACAGGATCATGTCTATTACCATCATGCAGCCGGACAAGAGATCATCTTGCGTGACTGGGATGAACCGGTCACGGCGCAGGCGGGCGGATCAACGTTCTATGGCGGCGATCTGGACGGGATAAGCGAAAAACTGCCGTATCTGAAAAAGCTTGGCGTGACAGCGCTGTATCTCAATCCGGTGTTTAAAGCTCCCAGCGTACATAAATACGATACCGAGGATTATCGCCATGTCGATCCGCAGTTTGGCGGTGATGGGGCGTTGCTGCGTTTGCGACACAATACGCAGCAGCTGGGAATGCGGCTGGTGCTGGACGGCGTGTTTAACCACAGTGGCGATTCCCATGCCTGGTTTGACAGGCATAATCGTGGCACGGGTGGTGCTTGTCACAACCCCGAATCGCCCTGGCGCGACTGGTACTCGTTTAGTGATGATGGCACGGCGCTCGACTGGCTTGGCTATGCCAGCTTGCCGAAGCTGGATTATCAGTCGGAAAGTCTGGTGAATGAAATTTATCGCGGGGAAGACAGTATTGTCCGCCACTGGCTGAAAGCGCCGTGGAATATGGACGGCTGGCGGCTGGATGTGGTGCATATGCTGGGGGAGGCGGGTGGGGCGCGCAATAATATGCAGCACGTTGCCGGGATCACCGAAGCGGCGAAAGAAACCCAGCCGGAAGCGTATATTGTCGGCGAACATTTTGGCGATGCACGGCAATGGTTACAGGCCGATGTGGAAGATGCCGCCATGAACTATCGTGGCTTCACATTCCCGTTGTGGGGATTTCTTGCCAATACCGATATCTCTTACGATCCGCAGCAAATTGATGCCCAAACCTGTATGGCCTGGATGGATAATTACCGCGCAGGGCTTTCTCATCAACAACAATTACGTATGTTTAATCAGCTCGACAGCCACGATACTGCGCGATTTAAAACGCTGCTCGGTCGGGATATTGCGCGCCTGCCGCTGGCGGTGGTCTGGCTGTTCACCTGGCCTGGTGTACCGTGCATTTATTACGGTGATGAAGTAGGACTGGATGGCAAAAACGATCCGTTTTGCCGTAAACCGTTCCCCTGGCAGGTGGAAAAGCAGGATACGGCGTTATTCGCGCTGTACCAGCGAATGATTGCGCTGCGTAAGAAAAGTCAGGCGCTACGTCATGGCGGCTGTCAGGTGCTGTATGCGGAAGATAACGTGGTGGTATTTGTCCGCGTGCTGAATCAGCAACGTGTACTGGTGGCAATCAACCGTGGCGAGGCCTGTGAAGTGGTGCTACCCGCGTCACCGTTTCTCAATGCCGTGCAATGGCAATGCAAAGAAGGGCATGGGCAACTGACTGACGGGATTCTGGCTTTGCCTGCCATTTCGGCTACGGTATGGATGAACTAA", + "dna_sequence_length": 1815, + "functions": [ + "maltodextrin glucosidase" + ], + "id": "CDS_396", + "location": [ + [ + "NC_000913", + 422518, + "+", + 1815 + ] + ], + "md5": "b6bab09b04294562343213f3252f1f31", + "parent_gene": "", + "protein_md5": "31ba00c2069d04a5ea9a4d3a66623e1e", + "protein_translation": "MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN", + "protein_translation_length": 604, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001404" + ], + [ + "gene_synonym", + "ECK0398" + ], + [ + "gene_synonym", + "EcoGene:EG11095" + ], + [ + "gene_synonym", + "GI:16128389" + ], + [ + "gene_synonym", + "GeneID:949132" + ], + [ + "gene_synonym", + "JW0394" + ], + [ + "gene_synonym", + "NP_414938.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21515" + ], + [ + "gene_synonym", + "acpD" + ], + [ + "gene_synonym", + "acpH" + ], + [ + "gene_synonym", + "b0404" + ], + [ + "gene_synonym", + "yajB" + ] + ], + "dna_sequence": "ATGAATTTTTTAGCTCACCTGCATTTAGCCCATCTCGCGGAAAGCTCGCTTTCCGGCAATTTACTGGCTGATTTCGTACGCGGAAATCCTGAAGAAAGTTTTCCGCCCGACGTCGTGGCTGGCATTCATATGCATCGACGTATCGACGTATTGACTGACAATCTGCCGGAAGTCCGCGAAGCACGGGAGTGGTTTCGTAGTGAAACGCGCCGCGTTGCGCCTATTACGCTGGATGTCATGTGGGATCACTTTCTTTCCCGCCACTGGTCGCAGCTGTCGCCGGACTTTCCGCTACAGGAATTTGTCTGTTATGCCCGCGAGCAAGTGATGACGATTTTGCCGGACTCACCGCCACGTTTTATCAATCTGAACAATTACTTGTGGTCAGAGCAGTGGCTGGTGCGCTATCGCGATATGGATTTCATCCAGAACGTGTTAAACGGCATGGCAAGCCGCCGCCCACGTCTGGATGCCCTGCGTGACTCCTGGTACGATTTAGACGCTCATTATGACGCCCTCGAAACCCGCTTCTGGCAGTTTTATCCGCGGATGATGGCGCAGGCGTCACGCAAGGCGTTATAA", + "dna_sequence_length": 582, + "functions": [ + "acyl carrier protein (ACP) phosphodiesterase", + "ACP hydrolyase" + ], + "id": "CDS_397", + "location": [ + [ + "NC_000913", + 424918, + "-", + 582 + ] + ], + "md5": "9ffb26c06aec2303706433d8188cfe6f", + "parent_gene": "", + "protein_md5": "2502d6cf4bbc03565b0eae18159ac0f1", + "protein_translation": "MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001411" + ], + [ + "gene_synonym", + "ECK0399" + ], + [ + "gene_synonym", + "EcoGene:EG10812" + ], + [ + "gene_synonym", + "GI:16128390" + ], + [ + "gene_synonym", + "GeneID:944905" + ], + [ + "gene_synonym", + "JW0395" + ], + [ + "gene_synonym", + "NP_414939.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7F9" + ], + [ + "gene_synonym", + "b0405" + ], + [ + "gene_synonym", + "queA" + ] + ], + "dna_sequence": "ATGCGCGTTACCGATTTCTCCTTTGAATTGCCCGAATCCCTGATTGCCCACTATCCCATGCCTGAACGCAGTAGCTGTCGTTTACTGTCGCTGGACGGGCCGACGGGCGCGCTGACGCACGGTACTTTCACCGATTTACTTGATAAGCTCAACCCCGGCGATCTTCTGGTTTTTAATAATACCCGCGTGATCCCGGCGCGCCTGTTTGGGCGTAAAGCCAGCGGCGGCAAGATTGAAGTGCTGGTTGAACGGATGCTCGACGACAAACGCATTCTTGCGCATATTCGCGCCTCGAAAGCGCCAAAACCTGGCGCAGAACTGCTGCTGGGCGATGACGAAAGTATTAACGCAACAATGACCGCGCGCCACGGCGCACTGTTTGAAGTCGAATTTAATGATGAACGCTCGGTGCTGGATATTCTCAACAGCATCGGCCATATGCCGCTGCCGCCGTATATCGACCGTCCGGACGAAGACGCTGACCGCGAACTTTATCAAACCGTTTATAGCGAAAAACCGGGCGCGGTTGCAGCCCCGACCGCAGGTCTGCATTTTGACGAGCCTTTGCTGGAAAAATTGCGCGCCAAAGGCGTGGAGATGGCGTTTGTGACGTTGCACGTTGGTGCGGGCACCTTCCAGCCGGTGCGCGTCGACACCATTGAAGATCACATCATGCACTCGGAATACGCTGAAGTACCGCAGGATGTGGTAGACGCGGTACTGGCGGCGAAAGCGCGCGGTAACCGGGTGATTGCGGTTGGCACCACTTCAGTACGTTCGCTGGAAAGCGCGGCTCAGGCAGCGAAAAACGATCTCATTGAACCGTTCTTCGACGATACCCAAATCTTTATCTATCCGGGCTTCCAGTACAAAGTGGTCGATGCGCTGGTGACGAACTTCCACTTGCCAGAGTCGACGCTGATTATGCTGGTTTCGGCCTTTGCCGGTTATCAACACACCATGAACGCCTATAAAGCAGCGGTAGAAGAGAAATATCGCTTTTTTAGTTACGGTGATGCGATGTTTATCACGTACAATCCGCAGGCAATTAATGAGCGCGTCGGGGAGTAA", + "dna_sequence_length": 1071, + "functions": [ + "S-adenosylmethionine:tRNA ribosyltransferase-isomerase" + ], + "id": "CDS_398", + "location": [ + [ + "NC_000913", + 425011, + "+", + 1071 + ] + ], + "md5": "1478438441e828ef5019e25121213794", + "parent_gene": "", + "protein_md5": "6c24b5c8dd2910015562bbc01843a363", + "protein_translation": "MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001413" + ], + [ + "gene_synonym", + "ECK0400" + ], + [ + "gene_synonym", + "EcoGene:EG10996" + ], + [ + "gene_synonym", + "GI:16128391" + ], + [ + "gene_synonym", + "GeneID:949130" + ], + [ + "gene_synonym", + "JW0396" + ], + [ + "gene_synonym", + "NP_414940.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A847" + ], + [ + "gene_synonym", + "b0406" + ], + [ + "gene_synonym", + "tgt" + ], + [ + "gene_synonym", + "vacC" + ] + ], + "dna_sequence": "ATGAAATTTGAACTGGACACCACCGACGGTCGCGCACGCCGTGGCCGCCTGGTCTTTGATCGTGGCGTAGTGGAAACGCCTTGTTTTATGCCTGTTGGCACCTACGGCACCGTAAAAGGGATGACGCCGGAAGAAGTTGAAGCCACTGGCGCGCAAATTATCCTCGGCAACACCTTCCACCTGTGGCTGCGCCCGGGCCAGGAAATCATGAAACTGCACGGCGATCTGCACGATTTTATGCAGTGGAAGGGGCCGATCCTCACCGACTCCGGCGGCTTCCAGGTCTTCAGCCTTGGCGATATTCGTAAAATCACCGAACAGGGCGTGCACTTCCGTAACCCGATCAACGGCGATCCGATTTTCCTCGATCCTGAAAAATCAATGGAGATTCAGTACGATCTTGGTTCGGATATCGTCATGATCTTTGATGAGTGTACGCCGTATCCTGCTGACTGGGATTACGCAAAACGCTCCATGGAGATGTCTCTGCGTTGGGCGAAGCGTAGCCGTGAGCGTTTTGACAGTCTCGGAAACAAAAATGCGCTGTTTGGTATCATCCAGGGCAGCGTTTACGAAGATTTACGTGATATTTCTGTTAAAGGTCTGGTAGATATCGGTTTTGATGGCTACGCTGTCGGCGGTCTGGCTGTGGGTGAGCCGAAAGCAGATATGCACCGCATTCTGGAGCATGTATGCCCGCAAATTCCGGCAGACAAACCGCGTTACCTGATGGGCGTTGGTAAACCAGAAGACCTGGTTGAAGGCGTACGTCGTGGTATCGATATGTTTGACTGCGTAATGCCAACCCGCAACGCCCGAAATGGTCATTTGTTCGTGACCGATGGCGTGGTGAAAATCCGCAATGCGAAGTATAAGAGCGATACTGGCCCACTCGATCCTGAGTGTGATTGCTACACCTGTCGCAATTATTCACGCGCTTACTTGCATCATCTTGACCGTTGCAACGAAATATTAGGCGCGCGACTCAACACCATTCATAACCTTCGTTACTACCAGCGTTTGATGGCGGGTTTACGCAAGGCTATTGAAGAGGGTAAATTAGAGAGCTTCGTAACTGATTTTTACCAGCGTCAGGGGCGAGAAGTACCACCTTTGAACGTTGATTAA", + "dna_sequence_length": 1128, + "functions": [ + "tRNA-guanine transglycosylase" + ], + "id": "CDS_399", + "location": [ + [ + "NC_000913", + 426137, + "+", + 1128 + ] + ], + "md5": "368adf52c3284d17febdb8ccfd2d0d9d", + "parent_gene": "", + "protein_md5": "91ce89c8c196f54ebdda1ef42dfb6aee", + "protein_translation": "MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001415" + ], + [ + "gene_synonym", + "ECK0401" + ], + [ + "gene_synonym", + "EcoGene:EG11096" + ], + [ + "gene_synonym", + "GI:16128392" + ], + [ + "gene_synonym", + "GeneID:945374" + ], + [ + "gene_synonym", + "JW0397" + ], + [ + "gene_synonym", + "NP_414941.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADZ7" + ], + [ + "gene_synonym", + "b0407" + ], + [ + "gene_synonym", + "yajC" + ] + ], + "dna_sequence": "ATGAGCTTTTTTATTTCTGATGCGGTAGCGGCAACGGGTGCACCGGCGCAAGGTAGCCCGATGTCTTTGATTTTGATGCTGGTGGTATTCGGTCTGATTTTCTATTTCATGATCCTGCGTCCACAGCAGAAGCGCACCAAAGAACACAAAAAGCTGATGGACTCCATTGCCAAAGGTGATGAAGTTCTGACGAACGGTGGCCTGGTTGGTCGCGTAACCAAAGTAGCGGAAAACGGCTACATTGCTATCGCGCTGAATGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAA", + "dna_sequence_length": 333, + "functions": [ + "SecYEG protein translocase auxillary subunit" + ], + "id": "CDS_400", + "location": [ + [ + "NC_000913", + 427287, + "+", + 333 + ] + ], + "md5": "8b7db9fae8a95adbfa0a64ca402e7a5b", + "parent_gene": "", + "protein_md5": "71affcd52404a53dba2f3b6f1bfef285", + "protein_translation": "MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001417" + ], + [ + "gene_synonym", + "ECK0402" + ], + [ + "gene_synonym", + "EcoGene:EG10938" + ], + [ + "gene_synonym", + "GI:16128393" + ], + [ + "gene_synonym", + "GeneID:949133" + ], + [ + "gene_synonym", + "JW0398" + ], + [ + "gene_synonym", + "NP_414942.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG90" + ], + [ + "gene_synonym", + "b0408" + ], + [ + "gene_synonym", + "secD" + ] + ], + "dna_sequence": "GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTCGTGAAGCATTAATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCCGGCAACGCCGCGCTGGCTGGCAGCTATTCACGCTGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGACACCGCGCTTGGCAAACTCCAGGAACAAAATATCGATAGCCTACGCAGTGACCTGCGCGAAAAGGGCATCCCGTATACCACTGTTCGTAAAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCTGCGTAACCGTGTAAACCAACTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAGGGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGCGCGTGCGAAAGAGATTCTGGGTGCGACGGCAACGCTGGAATTCCGTCTGGTAAACACCAACGTTGACCAGGCCGCTGCGGCATCCGGTCGCGTACCGGGCGACTCTGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTGGTGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAACCGATGGCAACCCTGTTTGTGGAGTACAAAGACAGCGGTAAGAAAGATGCAAATGGTCGTGCGGTTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATCACCGGCATCAACAACCCGAACGAAGCCCGTCAGCTGTCACTGCTGCTGCGTGCCGGTGCGTTGATCGCGCCGATTCAGATTGTTGAAGAACGTACCATTGGCCCAACCCTGGGTATGCAGAACATTGAACAGGGGCTGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTATTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCAACGGACGTACTGTTCAACAGGCAATTGATGAAGGTTATCGTGGCGCATTCAGTTCTATCTTCGATGCGAACATCACCACGCTGATTAAAGTCATCATCCTGTACGCAGTGGGTACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGA", + "dna_sequence_length": 1848, + "functions": [ + "SecYEG protein translocase auxillary subunit" + ], + "id": "CDS_401", + "location": [ + [ + "NC_000913", + 427647, + "+", + 1848 + ] + ], + "md5": "242fdb9dbae2e5484519a182221a2916", + "parent_gene": "", + "protein_md5": "51fdfca8e71148381d19e004eafb7861", + "protein_translation": "MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI", + "protein_translation_length": 615, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001419" + ], + [ + "gene_synonym", + "ECK0403" + ], + [ + "gene_synonym", + "EcoGene:EG10940" + ], + [ + "gene_synonym", + "GI:16128394" + ], + [ + "gene_synonym", + "GeneID:949120" + ], + [ + "gene_synonym", + "JW0399" + ], + [ + "gene_synonym", + "NP_414943.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG93" + ], + [ + "gene_synonym", + "b0409" + ], + [ + "gene_synonym", + "secF" + ] + ], + "dna_sequence": "GTGGCACAGGAATATACTGTTGAACAACTAAACCACGGCCGTAAAGTCTATGACTTTATGCGCTGGGACTACTGGGCTTTCGGCATCTCTGGTCTGCTGTTAATCGCTGCTATCGTTATTATGGGCGTGCGCGGCTTTAACTGGGGGCTGGATTTCACCGGTGGTACGGTTATTGAAATTACGCTCGAAAAACCGGCTGAAATTGACGTAATGCGTGATGCATTGCAAAAAGCCGGTTTTGAAGAGCCGATGCTGCAAAACTTTGGTAGCAGCCATGACATCATGGTCCGTATGCCGCCTGCTGAAGGCGAAACCGGCGGTCAGGTGTTGGGCAGCCAGGTTCTGAAGGTGATTAACGAATCCACCAATCAGAATGCAGCAGTGAAGCGTATTGAGTTCGTCGGTCCGAGCGTGGGGGCAGACCTTGCGCAAACCGGTGCGATGGCGTTGATGGCAGCGCTGCTGTCTATCCTCGTGTACGTAGGTTTCCGCTTTGAGTGGCGACTGGCGGCAGGGGTGGTTATTGCGCTGGCGCACGACGTTATCATTACGCTGGGTATTTTGTCGTTATTCCATATCGAGATTGACCTGACCATTGTGGCATCGTTGATGTCGGTTATCGGTTACTCGCTTAACGACAGTATCGTGGTATCGGACCGTATTCGTGAAAACTTCCGCAAGATCCGTCGCGGTACGCCTTACGAAATCTTTAACGTGTCCTTGACCCAGACGCTGCACCGTACCTTGATCACATCCGGTACTACCTTGATGGTTATCCTGATGCTGTACCTCTTCGGTGGTCCGGTACTGGAAGGCTTCTCGCTGACCATGCTTATCGGTGTTTCCATCGGTACTGCATCTTCCATCTATGTGGCATCTGCGTTGGCTCTGAAACTGGGTATGAAGCGCGAACACATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAA", + "dna_sequence_length": 972, + "functions": [ + "SecYEG protein translocase auxillary subunit" + ], + "id": "CDS_402", + "location": [ + [ + "NC_000913", + 429505, + "+", + 972 + ] + ], + "md5": "32d4c809aac078b0a6f6bf5faefd0bfa", + "parent_gene": "", + "protein_md5": "fd56b079f665d458d48c00e62f1a661d", + "protein_translation": "MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001422" + ], + [ + "gene_synonym", + "ECK0404" + ], + [ + "gene_synonym", + "EcoGene:EG11097" + ], + [ + "gene_synonym", + "GI:16128395" + ], + [ + "gene_synonym", + "GeneID:945051" + ], + [ + "gene_synonym", + "JW0400" + ], + [ + "gene_synonym", + "NP_414944.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAQ2" + ], + [ + "gene_synonym", + "b0410" + ], + [ + "gene_synonym", + "yajD" + ] + ], + "dna_sequence": "ATGGCTATCATCCCAAAAAACTATGCGCGGTTAGAAAGCGGCTATCGCGAAAAAGCATTAAAAATCTATCCGTGGGTCTGCGGTCGCTGTTCCCGCGAGTTTGTTTATTCCAACCTGCGTGAACTTACCGTTCACCACATTGATCACGACCATACCAATAACCCGGAAGATGGCAGTAACTGGGAATTGTTGTGTCTCTATTGCCACGATCATGAGCATTCGAAATATACCGAAGCGGATCAGTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGA", + "dna_sequence_length": 348, + "functions": [ + "HNH nuclease family protein" + ], + "id": "CDS_403", + "location": [ + [ + "NC_000913", + 430605, + "+", + 348 + ] + ], + "md5": "46b76d58bce4cfee6fc7c01279b8e520", + "parent_gene": "", + "protein_md5": "9423b535b2adce32a0371dc85f4279dc", + "protein_translation": "MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001425" + ], + [ + "gene_synonym", + "ECK0405" + ], + [ + "gene_synonym", + "EcoGene:EG11035" + ], + [ + "gene_synonym", + "GI:16128396" + ], + [ + "gene_synonym", + "GeneID:946242" + ], + [ + "gene_synonym", + "JW0401" + ], + [ + "gene_synonym", + "NP_414945.1" + ], + [ + "gene_synonym", + "T6rec" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A927" + ], + [ + "gene_synonym", + "b0411" + ], + [ + "gene_synonym", + "nupA" + ], + [ + "gene_synonym", + "tsx" + ] + ], + "dna_sequence": "ATGAAAAAAACATTACTGGCAGCCGGTGCGGTACTGGCGCTCTCTTCGTCTTTTACTGTCAACGCAGCTGAAAACGACAAACCGCAGTATCTTTCCGACTGGTGGCACCAGAGCGTTAACGTTGTCGGAAGCTATCACACCCGTTTCGGACCGCAGATCCGCAACGATACCTACCTTGAGTACGAAGCATTCGCTAAAAAAGACTGGTTCGACTTCTATGGTTATGCGGATGCGCCGGTATTCTTCGGCGGTAACTCCGATGCTAAAGGTATCTGGAACCACGGTTCTCCGCTGTTTATGGAAATCGAACCACGTTTCTCCATCGACAAGCTGACCAATACTGACCTTAGCTTCGGTCCGTTCAAAGAGTGGTACTTCGCGAACAACTACATTTACGACATGGGTCGTAATAAAGATGGTCGCCAGAGCACCTGGTACATGGGTCTGGGTACCGATATCGACACTGGCCTGCCGATGAGCCTGTCCATGAACGTCTATGCGAAATACCAGTGGCAGAACTATGGCGCAGCGAACGAAAACGAGTGGGACGGTTACCGTTTCAAAATTAAATACTTTGTGCCGATTACCGATCTGTGGGGCGGTCAGCTGAGCTACATCGGCTTCACCAACTTCGACTGGGGTTCCGATTTAGGGGATGACAGCGGTAACGCAATCAACGGTATTAAGACCCGTACTAATAACTCTATCGCTTCCAGCCATATTCTGGCTCTGAACTACGATCACTGGCACTACTCTGTCGTAGCTCGTTACTGGCACGACGGTGGTCAGTGGAACGACGATGCAGAACTGAACTTCGGCAACGGCAACTTCAACGTTCGCTCTACCGGCTGGGGTGGTTACCTGGTAGTAGGTTACAACTTCTGA", + "dna_sequence_length": 885, + "functions": [ + "nucleoside channel, receptor of phage T6 and colicin K" + ], + "id": "CDS_404", + "location": [ + [ + "NC_000913", + 432013, + "-", + 885 + ] + ], + "md5": "184133515af8e304c776154b02ef385c", + "parent_gene": "", + "protein_md5": "ed1b89a738bb5f7ee793c8ae2e770053", + "protein_translation": "MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001433" + ], + [ + "gene_synonym", + "ECK0406" + ], + [ + "gene_synonym", + "EcoGene:EG12874" + ], + [ + "gene_synonym", + "GI:90111129" + ], + [ + "gene_synonym", + "GeneID:947233" + ], + [ + "gene_synonym", + "JW5056" + ], + [ + "gene_synonym", + "NP_414946.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46122" + ], + [ + "gene_synonym", + "b0412" + ], + [ + "gene_synonym", + "yajI" + ] + ], + "dna_sequence": "ATGAATACTAACGTTTTTCGACTGCTCCTGCTGGGAAGCCTGTTCAGCCTTAGCGCCTGTGTGCAGCAAAGTGAAGTGCGACAGATGAAACACAGCGTCAGCACGCTGAACCAGGAGATGACGCAACTCAATCAAGAAACAGTCAAAATCACTCAGCAAAACAGGCTGAATGCAAAATCCAGCAGTGGGGTTTACCTTCTGCCTGGAGCGAAAACACCGGCAAGACTGGAAAGCCAGATCGGTACTTTACGTATGTCGCTGGTGAATATTACGCCTGATGCAGATGGCACCACCCTTACACTACGTATTCAGGGTGAGTCGAATGATCCCTTGCCCGCATTCAGCGGAACTGTTGAATATGGGCAAATTCAGGGAACAATAGACAACTTTCAGGAAATCAATGTGCAGAATCAATTGATTAATGCCCCTGCCAGCGTCCTCGCCCCCAGCGATGTTGATATTCCGTTACAGTTAAAGGGGATTTCTGTGGATCAGTTAGGCTTTGTACGTATCCACGACATTCAACCTGTTATGCAGTAA", + "dna_sequence_length": 540, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_405", + "location": [ + [ + "NC_000913", + 432851, + "-", + 540 + ] + ], + "md5": "3c0f53a20c0c955989f6447fcf55e535", + "parent_gene": "", + "protein_md5": "f85fab297748e29ce7fcec9f4e5e81c4", + "protein_translation": "MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNQETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGISVDQLGFVRIHDIQPVMQ", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001437" + ], + [ + "gene_synonym", + "ECK0407" + ], + [ + "gene_synonym", + "EcoGene:EG11320" + ], + [ + "gene_synonym", + "GI:16128398" + ], + [ + "gene_synonym", + "GeneID:947437" + ], + [ + "gene_synonym", + "JW0403" + ], + [ + "gene_synonym", + "NP_414947.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8D0" + ], + [ + "gene_synonym", + "b0413" + ], + [ + "gene_synonym", + "nrdR" + ], + [ + "gene_synonym", + "ribX" + ], + [ + "gene_synonym", + "ybaD" + ] + ], + "dna_sequence": "ATGCATTGCCCATTCTGTTTCGCCGTGGACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTACGCCGCCGTCGGCAGTGTCTGGTGTGTAATGAACGTTTCACCACCTTTGAAGTGGCGGAGCTGGTTATGCCGCGTGTTGTAAAAAGCAACGACGTGCGTGAACCGTTTAATGAAGAGAAATTGCGTAGCGGAATGCTGCGGGCGCTGGAAAAACGTCCGGTGAGTTCCGATGACGTCGAAATGGCAATCAATCATATTAAATCGCAGCTGCGCGCCACCGGTGAGCGCGAAGTGCCGAGCAAGATGATTGGCAATCTGGTGATGGAGCAATTGAAAAAGCTCGATAAAGTCGCCTATATCCGTTTTGCCTCTGTCTACCGCAGTTTCGAAGATATCAAAGAATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAA", + "dna_sequence_length": 450, + "functions": [ + "Nrd regulon repressor" + ], + "id": "CDS_406", + "location": [ + [ + "NC_000913", + 433002, + "+", + 450 + ] + ], + "md5": "3f4d031991540009875bd47e554db115", + "parent_gene": "", + "protein_md5": "38a74cb1c9ac64e2eec5a461bd6814cf", + "protein_translation": "MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001441" + ], + [ + "gene_synonym", + "ECK0408" + ], + [ + "gene_synonym", + "EcoGene:EG11321" + ], + [ + "gene_synonym", + "GI:16128399" + ], + [ + "gene_synonym", + "GeneID:945620" + ], + [ + "gene_synonym", + "JW0404" + ], + [ + "gene_synonym", + "NP_414948.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25539" + ], + [ + "gene_synonym", + "b0414" + ], + [ + "gene_synonym", + "ribD" + ], + [ + "gene_synonym", + "ribG" + ], + [ + "gene_synonym", + "ybaE" + ] + ], + "dna_sequence": "GTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCACCGGCTTTCCTTATATTCAGTTAAAACTTGGCGCATCGCTTGATGGTCGCACGGCGATGGCGAGCGGCGAAAGCCAGTGGATCACTTCGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCAACTGGGTAAACAGCAAATTAACAGCATCTGGGTGGAAGCGGGGCCAACGCTCGCTGGCGCATTGCTGCAGGCGGGTTTAGTCGATGAGCTGATTGTCTATATCGCACCTAAACTATTAGGCAGCGACGCCCGCGGATTATGCACGCTGCCAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGA", + "dna_sequence_length": 1104, + "functions": [ + "fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase" + ], + "id": "CDS_407", + "location": [ + [ + "NC_000913", + 433455, + "+", + 1104 + ] + ], + "md5": "7b41709c1e295736361a0ab96456cc83", + "parent_gene": "", + "protein_md5": "5364d153bc0b79b7eabdd129e885ca0a", + "protein_translation": "MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001444" + ], + [ + "gene_synonym", + "ECK0409" + ], + [ + "gene_synonym", + "EcoGene:EG11322" + ], + [ + "gene_synonym", + "GI:16128400" + ], + [ + "gene_synonym", + "GeneID:946453" + ], + [ + "gene_synonym", + "JW0405" + ], + [ + "gene_synonym", + "NP_414949.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61714" + ], + [ + "gene_synonym", + "b0415" + ], + [ + "gene_synonym", + "ribE" + ], + [ + "gene_synonym", + "ribH" + ], + [ + "gene_synonym", + "ybaF" + ] + ], + "dna_sequence": "ATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGGCTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGA", + "dna_sequence_length": 471, + "functions": [ + "riboflavin synthase beta chain" + ], + "id": "CDS_408", + "location": [ + [ + "NC_000913", + 434647, + "+", + 471 + ] + ], + "md5": "e30d81649a2222892bf5f09146b0eb09", + "parent_gene": "", + "protein_md5": "726e62e250bbd136faca4fd18d794103", + "protein_translation": "MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001447" + ], + [ + "gene_synonym", + "ECK0410" + ], + [ + "gene_synonym", + "EcoGene:EG10666" + ], + [ + "gene_synonym", + "GI:16128401" + ], + [ + "gene_synonym", + "GeneID:945054" + ], + [ + "gene_synonym", + "JW0406" + ], + [ + "gene_synonym", + "NP_414950.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A780" + ], + [ + "gene_synonym", + "b0416" + ], + [ + "gene_synonym", + "groNB" + ], + [ + "gene_synonym", + "nusB" + ], + [ + "gene_synonym", + "ssaD" + ], + [ + "gene_synonym", + "ssyB" + ] + ], + "dna_sequence": "GTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCCTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGA", + "dna_sequence_length": 420, + "functions": [ + "transcription antitermination protein" + ], + "id": "CDS_409", + "location": [ + [ + "NC_000913", + 435137, + "+", + 420 + ] + ], + "md5": "ae791b5217dd0bb63cdec2d0ffeff104", + "parent_gene": "", + "protein_md5": "ab94b0fdca273702d5dd8594481ef496", + "protein_translation": "MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001452" + ], + [ + "gene_synonym", + "ECK0411" + ], + [ + "gene_synonym", + "EcoGene:EG20227" + ], + [ + "gene_synonym", + "GI:16128402" + ], + [ + "gene_synonym", + "GeneID:947387" + ], + [ + "gene_synonym", + "JW0407" + ], + [ + "gene_synonym", + "NP_414951.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGG0" + ], + [ + "gene_synonym", + "b0417" + ], + [ + "gene_synonym", + "thiL" + ] + ], + "dna_sequence": "ATGGCATGTGGCGAGTTCTCCCTGATTGCCCGTTATTTTGACCGTGTAAGAAGTTCTCGTCTTGATGTCGAACTGGGCATCGGCGACGATTGCGCACTTCTCAATATCCCCGAGAAACAGACCCTGGCGATCAGCACTGATACGCTGGTGGCGGGTAACCATTTCCTCCCTGATATCGATCCTGCTGATCTGGCTTATAAAGCACTGGCGGTGAACCTAAGCGATCTGGCAGCGATGGGGGCCGATCCGGCCTGGCTGACGCTGGCATTAACCTTACCGGACGTAGACGAAGCGTGGCTTGAGTCCTTCAGCGACAGTTTGTTTGATCTTCTCAATTATTACGATATGCAACTCATTGGCGGCGATACCACGCGTGGGCCATTATCAATGACGTTGGGTATCCACGGCTTTGTTCCGATGGGACGAGCCTTAACGCGCTCTGGGGCGAAACCGGGTGACTGGATCTATGTGACCGGTACACCGGGCGATAGCGCCGCCGGGCTGGCGATTTTGCAAAACCGTTTGCAGGTTGCCGATGCTAAAGATGCGGACTACTTGATCAAACGTCATCTCCGTCCATCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATCTGGCAAATTCAGCCATCGATCTCTCTGACGGTTTGATTTCCGATCTCGGGCATATCGTGAAAGCCAGCGACTGCGGCGCACGTATTGACCTGGCATTGCTGCCGTTTTCTGATGCGCTTTCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCGTACCGTTTACCTGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAA", + "dna_sequence_length": 978, + "functions": [ + "thiamine monophosphate kinase" + ], + "id": "CDS_410", + "location": [ + [ + "NC_000913", + 435634, + "+", + 978 + ] + ], + "md5": "75f214746f1aa1e073476b3988549fbd", + "parent_gene": "", + "protein_md5": "dad5c3404a7cbb501851087af9277516", + "protein_translation": "MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001454" + ], + [ + "gene_synonym", + "ECK0412" + ], + [ + "gene_synonym", + "EcoGene:EG10704" + ], + [ + "gene_synonym", + "GI:16128403" + ], + [ + "gene_synonym", + "GeneID:947542" + ], + [ + "gene_synonym", + "JW0408" + ], + [ + "gene_synonym", + "NP_414952.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18200" + ], + [ + "gene_synonym", + "b0418" + ], + [ + "gene_synonym", + "pgpA" + ], + [ + "gene_synonym", + "yajN" + ] + ], + "dna_sequence": "ATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGATGGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATCATGGCAGCATTGTCTGGGACGAATTTATTGGTATGTGGATCACGCTCATGGCGCTGCCGACCAATGACTGGCAGTGGGTTGCCGCCGGGTTTGTGATTTTCCGTATTCTGGATATGTGGAAGCCGTGGCCGATCCGCTGGTTTGATCGCAATGTGCATGGCGGCATGGGGATCATGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAG", + "dna_sequence_length": 519, + "functions": [ + "phosphatidylglycerophosphatase A" + ], + "id": "CDS_411", + "location": [ + [ + "NC_000913", + 436589, + "+", + 519 + ] + ], + "md5": "85fc618049820086454ee0fdeed873db", + "parent_gene": "", + "protein_md5": "21f16f854e3ba61149163dd69681337a", + "protein_translation": "MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001457" + ], + [ + "gene_synonym", + "ECK0413" + ], + [ + "gene_synonym", + "EcoGene:EG13611" + ], + [ + "gene_synonym", + "GI:90111130" + ], + [ + "gene_synonym", + "GeneID:946903" + ], + [ + "gene_synonym", + "JW0409" + ], + [ + "gene_synonym", + "NP_414953.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77735" + ], + [ + "gene_synonym", + "b0419" + ], + [ + "gene_synonym", + "yajO" + ] + ], + "dna_sequence": "ATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCAGATCGCGGTAATCACGCATGGACACTGCCGGAAGAAAGCAGCCGTCCCATAATTAAACGTGCACTGGAAGGCGGCATAAATTTCTTTGATACCGCCAACAGTTATTCTGACGGCAGCAGCGAAGAGATCGTCGGTCGCGCACTGCGGGATTTCGCCCGTCGTGAAGACGTGGTCGTTGCGACCAAAGTGTTCCATCGCGTTGGTGATTTACCGGAAGGATTATCCCGTGCGCAAATTTTGCGCTCTATCGACGACAGCCTGCGACGTCTCGGCATGGATTATGTCGATATCCTGCAAATTCATCGCTGGGATTACAACACGCCGATCGAAGAGACGCTGGAAGCCCTCAACGACGTGGTAAAAGCCGGGAAAGCGCGTTATATCGGCGCGTCATCAATGCACGCTTCGCAGTTTGCTCAGGCACTGGAACTCCAAAAACAGCACGGCTGGGCGCAGTTTGTCAGTATGCAGGATCACTACAATCTGATTTATCGTGAAGAAGAGCGCGAGATGCTACCACTGTGTTATCAGGAGGGCGTGGCGGTAATTCCATGGAGCCCGCTGGCAAGGGGCCGTCTGACGCGTCCGTGGGGAGAAACTACCGCACGACTGGTGTCTGATGAGGTGGGGAAAAATCTCTATAAAGAAAGCGATGAAAATGACGCGCAGATCGCAGAGCGGTTAACAGGCGTCAGTGAAGAACTGGGGGCGACACGAGCACAAGTTGCGCTGGCCTGGTTGTTGAGTAAACCGGGCATTGCCGCACCGATTATCGGAACTTCGCGCGAAGAACAGCTTGATGAGCTATTGAACGCGGTGGATATCACTTTGAAGCCGGAACAGATTGCCGAACTGGAAACGCCGTATAAACCGCATCCTGTCGTAGGATTTAAATAA", + "dna_sequence_length": 975, + "functions": [ + "2-carboxybenzaldehyde reductase" + ], + "id": "CDS_412", + "location": [ + [ + "NC_000913", + 438135, + "-", + 975 + ] + ], + "md5": "621018f92c1fbbaf675a0fa7581fd4af", + "parent_gene": "", + "protein_md5": "6f239857fde2e286b67a868ac42113d0", + "protein_translation": "MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001461" + ], + [ + "gene_synonym", + "ECK0414" + ], + [ + "gene_synonym", + "EcoGene:EG13612" + ], + [ + "gene_synonym", + "GI:16128405" + ], + [ + "gene_synonym", + "GeneID:945060" + ], + [ + "gene_synonym", + "JW0410" + ], + [ + "gene_synonym", + "NP_414954.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77488" + ], + [ + "gene_synonym", + "b0420" + ], + [ + "gene_synonym", + "dxs" + ], + [ + "gene_synonym", + "yajP" + ] + ], + "dna_sequence": "ATGAGTTTTGATATTGCCAAATACCCGACCCTGGCACTGGTCGACTCCACCCAGGAGTTACGACTGTTGCCGAAAGAGAGTTTACCGAAACTCTGCGACGAACTGCGCCGCTATTTACTCGACAGCGTGAGCCGTTCCAGCGGGCACTTCGCCTCCGGGCTGGGCACGGTCGAACTGACCGTGGCGCTGCACTATGTCTACAACACCCCGTTTGACCAATTGATTTGGGATGTGGGGCATCAGGCTTATCCGCATAAAATTTTGACCGGACGCCGCGACAAAATCGGCACCATCCGTCAGAAAGGCGGTCTGCACCCGTTCCCGTGGCGCGGCGAAAGCGAATATGACGTATTAAGCGTCGGGCATTCATCAACCTCCATCAGTGCCGGAATTGGTATTGCGGTTGCTGCCGAAAAAGAAGGCAAAAATCGCCGCACCGTCTGTGTCATTGGCGATGGCGCGATTACCGCAGGCATGGCGTTTGAAGCGATGAATCACGCGGGCGATATCCGTCCTGATATGCTGGTGATTCTCAACGACAATGAAATGTCGATTTCCGAAAATGTCGGCGCGCTCAACAACCATCTGGCACAGCTGCTTTCCGGTAAGCTTTACTCTTCACTGCGCGAAGGCGGGAAAAAAGTTTTCTCTGGCGTGCCGCCAATTAAAGAGCTGCTCAAACGCACCGAAGAACATATTAAAGGCATGGTAGTGCCTGGCACGTTGTTTGAAGAGCTGGGCTTTAACTACATCGGCCCGGTGGACGGTCACGATGTGCTGGGGCTTATCACCACGCTAAAGAACATGCGCGACCTGAAAGGCCCGCAGTTCCTGCATATCATGACCAAAAAAGGTCGTGGTTATGAACCGGCAGAAAAAGACCCGATCACTTTCCACGCCGTGCCTAAATTTGATCCCTCCAGCGGTTGTTTGCCGAAAAGTAGCGGCGGTTTGCCGAGCTATTCAAAAATCTTTGGCGACTGGTTGTGCGAAACGGCAGCGAAAGACAACAAGCTGATGGCGATTACTCCGGCGATGCGTGAAGGTTCCGGCATGGTCGAGTTTTCACGTAAATTCCCGGATCGCTACTTCGACGTGGCAATTGCCGAGCAACACGCGGTGACCTTTGCTGCGGGTCTGGCGATTGGTGGGTACAAACCCATTGTCGCGATTTACTCCACTTTCCTGCAACGCGCCTATGATCAGGTGCTGCATGACGTGGCGATTCAAAAGCTTCCGGTCCTGTTCGCCATCGACCGCGCGGGCATTGTTGGTGCTGACGGTCAAACCCATCAGGGTGCTTTTGATCTCTCTTACCTGCGCTGCATACCGGAAATGGTCATTATGACCCCGAGCGATGAAAACGAATGTCGCCAGATGCTCTATACCGGCTATCACTATAACGATGGCCCGTCAGCGGTGCGCTACCCGCGTGGCAACGCGGTCGGCGTGGAACTGACGCCGCTGGAAAAACTACCAATTGGCAAAGGCATTGTGAAGCGTCGTGGCGAGAAACTGGCGATCCTTAACTTTGGTACGCTGATGCCAGAAGCGGCGAAAGTCGCCGAATCGCTGAACGCCACGCTGGTCGATATGCGTTTTGTGAAACCGCTTGATGAAGCGTTAATTCTGGAAATGGCCGCCAGCCATGAAGCGCTGGTCACCGTAGAAGAAAACGCCATTATGGGCGGCGCAGGCAGCGGCGTGAACGAAGTGCTGATGGCCCATCGTAAACCAGTACCCGTGCTGAACATTGGCCTGCCGGACTTCTTTATTCCGCAAGGAACTCAGGAAGAAATGCGCGCCGAACTCGGCCTCGATGCCGCTGGTATGGAAGCCAAAATCAAGGCCTGGCTGGCATAA", + "dna_sequence_length": 1863, + "functions": [ + "1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring" + ], + "id": "CDS_413", + "location": [ + [ + "NC_000913", + 440177, + "-", + 1863 + ] + ], + "md5": "cbce08a7dc3c09f9031bfa8efb534c77", + "parent_gene": "", + "protein_md5": "4972d29224db60427f2e8050ccd576c8", + "protein_translation": "MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA", + "protein_translation_length": 620, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001463" + ], + [ + "gene_synonym", + "ECK0415" + ], + [ + "gene_synonym", + "EcoGene:EG10508" + ], + [ + "gene_synonym", + "GI:16128406" + ], + [ + "gene_synonym", + "GeneID:945064" + ], + [ + "gene_synonym", + "JW0411" + ], + [ + "gene_synonym", + "NP_414955.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22939" + ], + [ + "gene_synonym", + "b0421" + ], + [ + "gene_synonym", + "ispA" + ] + ], + "dna_sequence": "ATGGACTTTCCGCAGCAACTCGAAGCCTGCGTTAAGCAGGCCAACCAGGCGCTGAGCCGTTTTATCGCCCCACTGCCCTTTCAGAACACTCCCGTGGTCGAAACCATGCAGTATGGCGCATTATTAGGTGGTAAGCGCCTGCGACCTTTCCTGGTTTATGCCACCGGTCATATGTTCGGCGTTAGCACAAACACGCTGGACGCACCCGCTGCCGCCGTTGAGTGTATCCACGCTTACTCATTAATTCATGATGATTTACCGGCAATGGATGATGACGATCTGCGTCGCGGTTTGCCAACCTGCCATGTGAAGTTTGGCGAAGCAAACGCGATTCTCGCTGGCGACGCTTTACAAACGCTGGCGTTCTCGATTTTAAGCGATGCCGATATGCCGGAAGTGTCGGACCGCGACAGAATTTCGATGATTTCTGAACTGGCGAGCGCCAGTGGTATTGCCGGAATGTGCGGTGGTCAGGCATTAGATTTAGACGCGGAAGGCAAACACGTACCTCTGGACGCGCTTGAGCGTATTCATCGTCATAAAACCGGCGCATTGATTCGCGCCGCCGTTCGCCTTGGTGCATTAAGCGCCGGAGATAAAGGACGTCGTGCTCTGCCGGTACTCGACAAGTATGCAGAGAGCATCGGCCTTGCCTTCCAGGTTCAGGATGACATCCTGGATGTGGTGGGAGATACTGCAACGTTGGGAAAACGCCAGGGTGCCGACCAGCAACTTGGTAAAAGTACCTACCCTGCACTTCTGGGTCTTGAGCAAGCCCGGAAGAAAGCCCGGGATCTGATCGACGATGCCCGTCAGTCGCTGAAACAACTGGCTGAACAGTCACTCGATACCTCGGCACTGGAAGCGCTAGCGGACTACATCATCCAGCGTAATAAATAA", + "dna_sequence_length": 900, + "functions": [ + "geranyltranstransferase" + ], + "id": "CDS_414", + "location": [ + [ + "NC_000913", + 441101, + "-", + 900 + ] + ], + "md5": "d22c10419287360a051e46bf0d950c0a", + "parent_gene": "", + "protein_md5": "a3f97f10bebcc599f65f6498301607e7", + "protein_translation": "MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001466" + ], + [ + "gene_synonym", + "ECK0416" + ], + [ + "gene_synonym", + "EcoGene:EG11098" + ], + [ + "gene_synonym", + "GI:16128407" + ], + [ + "gene_synonym", + "GeneID:945069" + ], + [ + "gene_synonym", + "JW0412" + ], + [ + "gene_synonym", + "NP_414956.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8G9" + ], + [ + "gene_synonym", + "b0422" + ], + [ + "gene_synonym", + "xseB" + ], + [ + "gene_synonym", + "yajE" + ] + ], + "dna_sequence": "ATGCCGAAGAAAAATGAGGCGCCCGCCAGCTTTGAAAAGGCGCTGAGCGAGCTGGAACAGATTGTAACCCGTCTGGAAAGTGGCGACCTGCCGCTGGAAGAGGCGCTGAACGAGTTCGAACGCGGCGTGCAGCTGGCACGTCAGGGGCAGGCCAAATTACAACAAGCCGAACAGCGCGTACAAATTCTGCTGTCTGACAATGAAGACGCCTCTCTAACCCCTTTTACACCGGACAATGAGTAA", + "dna_sequence_length": 243, + "functions": [ + "exonuclease VII small subunit" + ], + "id": "CDS_415", + "location": [ + [ + "NC_000913", + 441343, + "-", + 243 + ] + ], + "md5": "ce2bd71895d7e0833f8a73d6ca6c4e4c", + "parent_gene": "", + "protein_md5": "0f0feee8b183ef8c8fdd4ac0df27ae16", + "protein_translation": "MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001470" + ], + [ + "gene_synonym", + "ECK0417" + ], + [ + "gene_synonym", + "EcoGene:EG13273" + ], + [ + "gene_synonym", + "GI:16128408" + ], + [ + "gene_synonym", + "GeneID:945067" + ], + [ + "gene_synonym", + "JW0413" + ], + [ + "gene_synonym", + "NP_414957.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77718" + ], + [ + "gene_synonym", + "b0423" + ], + [ + "gene_synonym", + "nuvA" + ], + [ + "gene_synonym", + "thiI" + ], + [ + "gene_synonym", + "yajJ" + ], + [ + "gene_synonym", + "yajK" + ] + ], + "dna_sequence": "ATGAAGTTTATCATTAAATTGTTCCCGGAAATCACCATCAAAAGCCAATCTGTGCGCTTGCGCTTTATAAAAATCCTTACCGGGAACATTCGTAACGTTTTAAAGCACTATGATGAGACGCTCGCTGTCGTCCGCCACTGGGATAACATCGAAGTTCGCGCAAAAGATGAAAACCAGCGTCTGGCTATTCGCGACGCTCTGACCCGTATTCCGGGTATCCACCATATTCTCGAAGTCGAAGACGTGCCGTTTACCGACATGCACGATATTTTCGAGAAAGCGTTGGTTCAGTATCGCGATCAGCTGGAAGGCAAAACCTTCTGCGTACGCGTGAAGCGCCGTGGCAAACATGATTTTAGCTCGATTGATGTGGAACGTTACGTCGGCGGCGGTTTAAATCAGCATATTGAATCCGCGCGCGTGAAGCTGACCAATCCGGATGTGACTGTCCATCTGGAAGTGGAAGACGATCGTCTCCTGCTGATTAAAGGCCGCTACGAAGGTATTGGCGGTTTCCCGATCGGCACCCAGGAAGATGTGCTGTCGCTCATTTCCGGTGGTTTCGACTCCGGTGTTTCCAGTTATATGTTGATGCGTCGCGGCTGCCGCGTGCATTACTGCTTCTTTAACCTCGGCGGCGCGGCGCATGAAATTGGCGTGCGTCAGGTGGCGCATTATCTGTGGAACCGCTTTGGCAGCTCCCACCGCGTGCGTTTTGTCGCTATTAATTTCGAACCGGTCGTCGGGGAAATTCTCGAGAAAATCGACGACGGTCAGATGGGCGTTATCCTCAAACGTATGATGGTGCGTGCCGCATCTAAAGTGGCTGAACGTTACGGCGTACAGGCGCTGGTCACCGGCGAAGCGCTCGGCCAGGTGTCCAGCCAGACGCTGACCAACCTGCGCCTGATTGATAACGTCTCCGACACGCTGATCCTGCGTCCGCTGATCTCTTACGACAAAGAGCACATCATCAACCTGGCCCGCCAGATTGGCACCGAAGACTTTGCTCGCACGATGCCGGAATATTGTGGTGTGATCTCCAAAAGCCCGACGGTGAAAGCAGTTAAATCGAAGATTGAAGCGGAAGAAGAGAAGTTCGACTTCAGCATTCTCGATAAAGTGGTTGAGGAAGCGAATAACGTTGATATCCGCGAAATCGCCCAGCAGACCGAGCAGGAAGTGGTGGAAGTGGAAACCGTCAATGGCTTCGGCCCGAACGACGTGATCCTCGATATCCGTTCTATCGATGAACAGGAAGATAAGCCACTGAAAGTCGAAGGGATTGATGTGGTTTCTCTGCCGTTCTATAAACTGAGCACCAAATTTGGCGATCTCGACCAGAACAAAACCTGGCTGCTGTGGTGTGAGCGCGGGGTGATGAGCCGTCTGCAGGCGCTCTATCTGCGCGAGCAGGGCTTTAACAATGTGAAGGTATATCGCCCGTAA", + "dna_sequence_length": 1449, + "functions": [ + "tRNA s(4)U8 sulfurtransferase" + ], + "id": "CDS_416", + "location": [ + [ + "NC_000913", + 441549, + "+", + 1449 + ] + ], + "md5": "5eff227e9c9edd72941a3b715c9c1f11", + "parent_gene": "", + "protein_md5": "40eefeb932a427e6f57410b53b69e3b2", + "protein_translation": "MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKVYRP", + "protein_translation_length": 482, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001472" + ], + [ + "gene_synonym", + "ECK0418" + ], + [ + "gene_synonym", + "EcoGene:EG13272" + ], + [ + "gene_synonym", + "GI:90111131" + ], + [ + "gene_synonym", + "GeneID:945066" + ], + [ + "gene_synonym", + "JW5057" + ], + [ + "gene_synonym", + "NP_414958.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46948" + ], + [ + "gene_synonym", + "b0424" + ], + [ + "gene_synonym", + "thiJ" + ], + [ + "gene_synonym", + "yajL" + ] + ], + "dna_sequence": "ATGAGCGCATCGGCACTGGTTTGCCTCGCCCCTGGTAGTGAAGAGACTGAAGCCGTCACCACTATCGATCTGCTGGTTCGCGGCGGTATCAAAGTCACCACTGCCAGCGTCGCCAGCGATGGTAACCTGGCGATTACCTGCTCGCGCGGCGTGAAGCTGCTGGCGGATGCGCCGCTGGTCGAAGTGGCTGATGGCGAATATGACGTGATCGTGCTGCCTGGTGGCATTAAAGGCGCGGAGTGTTTTCGCGATAGCACTCTGCTGGTTGAAACCGTTAAACAGTTCCACCGTTCCGGGCGTATCGTCGCGGCTATTTGCGCCGCGCCAGCCACCGTGCTGGTGCCGCACGATATCTTCCCGATTGGTAATATGACCGGCTTCCCGACGCTGAAAGACAAAATTCCCGCCGAACAATGGCTGGACAAGCGCGTCGTCTGGGATGCACGGGTAAAATTGCTGACCAGCCAGGGGCCGGGTACAGCTATCGACTTTGGTCTGAAAATTATCGACCTGTTGGTTGGGCGTGAAAAAGCCCATGAAGTGGCATCACAACTGGTGATGGCGGCAGGGATTTATAATTATTACGAGTAG", + "dna_sequence_length": 591, + "functions": [ + "oxidative-stress-resistance chaperone" + ], + "id": "CDS_417", + "location": [ + [ + "NC_000913", + 443641, + "-", + 591 + ] + ], + "md5": "226f55d358d1e69630eb89ddea45a2e1", + "parent_gene": "", + "protein_md5": "fa0d3c949697af67f435b8aef0a96a5a", + "protein_translation": "MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001474" + ], + [ + "gene_synonym", + "ECK0419" + ], + [ + "gene_synonym", + "EcoGene:EG13271" + ], + [ + "gene_synonym", + "GI:16128410" + ], + [ + "gene_synonym", + "GeneID:945065" + ], + [ + "gene_synonym", + "JW0415" + ], + [ + "gene_synonym", + "NP_414959.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J4" + ], + [ + "gene_synonym", + "apbA" + ], + [ + "gene_synonym", + "b0425" + ], + [ + "gene_synonym", + "panE" + ] + ], + "dna_sequence": "ATGAAAATTACCGTATTGGGATGCGGTGCCTTAGGGCAATTATGGCTTACAGCACTTTGCAAACAGGGTCATGAAGTTCAGGGCTGGCTGCGCGTACCGCAACCTTATTGTAGCGTGAATCTGGTTGAGACAGATGGTTCGATATTTAACGAATCGCTGACCGCCAACGATCCCGATTTTCTCGCCACCAGCGATCTGCTCCTGGTGACGCTGAAAGCATGGCAGGTTTCCGATGCCGTCAAAAGCCTCGCGTCCACACTGCCTGTAACTACGCCAATACTGTTAATTCACAACGGCATGGGCACCATCGAAGAGTTGCAAAACATTCAGCAGCCATTACTGATGGGCACCACCACCCATGCAGCCCGCCGCGACGGCAATGTCATTATTCATGTGGCAAACGGTATCACGCATATTGGCCCGGCACGGCAACAGGACGGGGATTACAGTTATCTGGCGGATATTTTGCAAACCGTGTTGCCTGACGTTGCCTGGCATAACAATATTCGCGCCGAGCTGTGGCGCAAGCTGGCAGTCAACTGCGTGATTAATCCACTGACTGCCATCTGGAATTGCCCGAACGGTGAATTACGTCATCATCCGCAAGAAATTATGCAGATATGCGAAGAAGTCGCGGCGGTGATCGAACGCGAAGGGCATCATACTTCAGCAGAAGATTTGCGTGATTACGTGATGCAGGTGATTGATGCCACAGCGGAAAATATCTCGTCGATGTTGCAGGATATCCGCGCGCTGCGCCACACTGAAATCGACTATATCAATGGTTTTCTCTTACGCCGCGCCCGCGCGCATGGGATTGCCGTACCGGAAAACACCCGCCTGTTTGAAATGGTAAAAAGAAAGGAGAGTGAATATGAGCGCATCGGCACTGGTTTGCCTCGCCCCTGGTAG", + "dna_sequence_length": 912, + "functions": [ + "2-dehydropantoate reductase, NADPH-specific" + ], + "id": "CDS_418", + "location": [ + [ + "NC_000913", + 444515, + "-", + 912 + ] + ], + "md5": "8a20e9855e149424c0ba64c2630ca735", + "parent_gene": "", + "protein_md5": "6b68f148109cf622045d2398a272c212", + "protein_translation": "MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLPRPW", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001478" + ], + [ + "gene_synonym", + "ECK0420" + ], + [ + "gene_synonym", + "EcoGene:EG13613" + ], + [ + "gene_synonym", + "GI:90111132" + ], + [ + "gene_synonym", + "GeneID:945063" + ], + [ + "gene_synonym", + "JW5058" + ], + [ + "gene_synonym", + "NP_414960.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8E7" + ], + [ + "gene_synonym", + "b0426" + ], + [ + "gene_synonym", + "yajQ" + ] + ], + "dna_sequence": "ATGCCATCTTTCGATATTGTCTCTGAAGTTGATCTTCAGGAAGCACGTAACGCGGTCGATAACGCGAGCCGCGAAGTGGAGTCCCGTTTTGACTTCCGTAACGTTGAAGCCTCATTTGAGCTGAACGACGCCAGCAAAACCATCAAAGTGTTGAGCGAGTCCGATTTCCAGGTCAATCAGTTGCTGGATATTCTGCGTGCCAAGCTGCTGAAGCGCGGCATTGAAGGCAGTTCGCTGGATGTACCGGAGAATATCGTTCATAGCGGTAAAACCTGGTTTGTGGAAGCGAAACTGAAACAGGGCATTGAGAGCGCGACCCAGAAGAAAATCGTCAAGATGATCAAAGACAGCAAACTGAAAGTGCAGGCGCAAATTCAGGGCGATGAAATCCGCGTAACGGGCAAATCTCGTGATGATTTGCAGGCTGTCATGGCGATGGTACGTGGTGGCGATCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAA", + "dna_sequence_length": 492, + "functions": [ + "phage Phi6 host factor, ATP/GTP binding protein" + ], + "id": "CDS_419", + "location": [ + [ + "NC_000913", + 444683, + "+", + 492 + ] + ], + "md5": "f1ef294c7815b925751b1355403009fe", + "parent_gene": "", + "protein_md5": "43b40eec41574e304aeb711bfdc83b82", + "protein_translation": "MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKNFRD", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001481" + ], + [ + "gene_synonym", + "ECK0421" + ], + [ + "gene_synonym", + "EcoGene:EG13614" + ], + [ + "gene_synonym", + "GI:90111133" + ], + [ + "gene_synonym", + "GeneID:945058" + ], + [ + "gene_synonym", + "JW5059" + ], + [ + "gene_synonym", + "NP_414961.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77726" + ], + [ + "gene_synonym", + "b0427" + ], + [ + "gene_synonym", + "yajR" + ] + ], + "dna_sequence": "ATGAACGATTATAAAATGACGCCAGGTGAGAGGCGCGCGACCTGGGGTTTAGGGACCGTATTCTCGTTGCGCATGCTGGGCATGTTTATGGTTCTGCCGGTTCTGACCACGTACGGCATGGCTCTGCAAGGTGCCAGCGAAGCATTAATCGGTATTGCCATTGGTATTTATGGTCTGACTCAGGCCGTTTTTCAGATTCCGTTTGGCCTGCTTTCCGACCGCATTGGTCGCAAACCATTAATTGTCGGTGGGCTGGCGGTGTTTGCCGCCGGTAGCGTTATCGCTGCGCTTTCCGACTCCATCTGGGGAATTATTCTGGGCCGGGCGCTACAAGGCTCTGGAGCAATTGCCGCCGCCGTTATGGCGCTGCTTTCCGATCTCACGCGCGAACAAAACCGCACCAAAGCGATGGCGTTTATCGGCGTGAGCTTTGGCATTACCTTTGCCATTGCGATGGTGCTTGGCCCGATCATCACTCACAAACTTGGGCTGCACGCGCTGTTCTGGATGATCGCTATTCTGGCAACGACCGGCATTGCGTTGACCATTTGGGTTGTGCCCAACAGTAGCACTCACGTACTTAATCGTGAGTCCGGAATGGTGAAAGGCAGTTTCAGTAAAGTGCTGGCGGAACCGCGGCTGCTGAAACTCAACTTTGGCATTATGTGTCTGCATATTTTGCTGATGTCGACGTTTGTTGCCCTGCCCGGACAACTGGCTGATGCAGGGTTCCCGGCGGCTGAACACTGGAAGGTCTATCTGGCGACAATGCTAATCGCCTTTGGCTCGGTCGTGCCTTTCATTATCTACGCTGAAGTTAAGCGCAAAATGAAGCAAGTCTTTGTCTTCTGCGTCGGGTTGATCGTGGTTGCGGAAATTGTGTTGTGGAACGCGCAAACGCAGTTCTGGCAACTGGTGGTCGGCGTGCAGCTTTTCTTTGTGGCGTTTAATTTGATGGAAGCCCTCCTGCCCTCACTTATCAGTAAAGAGTCGCCAGCAGGTTACAAAGGTACGGCGATGGGTGTTTACTCCACCAGCCAGTTTCTTGGCGTGGCGATTGGCGGTTCGCTGGGCGGCTGGATTAACGGCATGTTTGACGGTCAGGGGGTATTTCTCGCTGGCGCAATGCTGGCCGCAGTGTGGCTGACAGTCGCCAGTACCATGAAAGAACCGCCGTATGTCAGCAGTTTGCGCATTGAAATCCCGGCGAACATTGCCGCAAACGAGGCGTTAAAAGTGCGTTTGCTAGAAACTGAAGGCATCAAAGAAGTGTTGATTGCAGAAGAAGAACATTCAGCTTATGTGAAAATCGACAGCAAAGTGACGAATCGCTTTGAGATAGAACAGGCAATTCGTCAGGCATAA", + "dna_sequence_length": 1365, + "functions": [ + "putative transporter" + ], + "id": "CDS_420", + "location": [ + [ + "NC_000913", + 446666, + "-", + 1365 + ] + ], + "md5": "2362a9d789d7b4dbd14fe7bbf774293f", + "parent_gene": "", + "protein_md5": "409893d58a5d003d03cd88763bd4d100", + "protein_translation": "MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWINGMFDGQGVFLAGAMLAAVWLTVASTMKEPPYVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFEIEQAIRQA", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001484" + ], + [ + "gene_synonym", + "ECK0422" + ], + [ + "gene_synonym", + "EcoGene:EG10182" + ], + [ + "gene_synonym", + "GI:16128413" + ], + [ + "gene_synonym", + "GeneID:945073" + ], + [ + "gene_synonym", + "JW0418" + ], + [ + "gene_synonym", + "NP_414962.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEA5" + ], + [ + "gene_synonym", + "b0428" + ], + [ + "gene_synonym", + "cyoE" + ] + ], + "dna_sequence": "ATGATGTTTAAGCAATACCTGCAAGTAACGAAACCAGGCATCATCTTTGGCAACCTGATCTCGGTGATTGGGGGATTCCTGCTGGCCTCAAAGGGCAGCATTGATTATCCCCTGTTTATCTACACGCTGGTTGGGGTGTCACTGGTTGTGGCGTCGGGTTGTGTGTTTAACAACTACATCGACAGGGATATCGACAGAAAGATGGAAAGGACGAAGAATCGGGTGCTGGTGAAAGGCCTGATCTCTCCTGCTGTCTCGCTGGTGTACGCCACGTTGCTGGGTATTGCTGGCTTTATGCTGCTGTGGTTTGGCGCGAATCCGCTGGCCTGCTGGCTGGGGGTGATGGGCTTTGTGGTTTATGTCGGCGTTTATAGCCTGTACATGAAACGCCACTCTGTCTACGGCACGTTGATTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCTTCAGCCTGTGGCAGATGCCTCACTCCTATGCCATCGCCATTTTCCGCTTTAAGGATTACCAGGCGGCAAACATTCCGGTATTGCCAGTGGTAAAAGGCATTTCGGTGGCGAAGAATCACATCACGCTGTATATCATCGCCTTTGCCGTTGCCACGCTGATGCTCTCTCTTGGCGGTTACGCTGGGTATAAATATCTGGTGGTCGCCGCGGCGGTTAGCGTCTGGTGGTTAGGTATGGCTCTGCGCGGTTATAAAGTTGCTGATGACAGAATCTGGGCGCGCAAGCTGTTCGGCTTCTCTATCATCGCCATCACTGCCCTCTCGGTGATGATGTCCGTTGATTTTATGGTACCGGACTCGCATACGCTGCTGGCTGCTGTGTGGTAA", + "dna_sequence_length": 891, + "functions": [ + "protoheme IX farnesyltransferase" + ], + "id": "CDS_421", + "location": [ + [ + "NC_000913", + 447705, + "-", + 891 + ] + ], + "md5": "d7231e3019ac417d1e81ba834572b824", + "parent_gene": "", + "protein_md5": "59473cc5528cc4a5cd579c211a8b4d8e", + "protein_translation": "MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001487" + ], + [ + "gene_synonym", + "ECK0423" + ], + [ + "gene_synonym", + "EcoGene:EG10181" + ], + [ + "gene_synonym", + "GI:16128414" + ], + [ + "gene_synonym", + "GeneID:944918" + ], + [ + "gene_synonym", + "JW0419" + ], + [ + "gene_synonym", + "NP_414963.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABJ6" + ], + [ + "gene_synonym", + "b0429" + ], + [ + "gene_synonym", + "cyoD" + ] + ], + "dna_sequence": "ATGAGTCATTCTACCGATCACAGCGGCGCGTCCCATGGCAGCGTAAAAACCTACATGACAGGCTTTATCCTGTCGATCATTCTGACGGTGATTCCGTTCTGGATGGTGATGACAGGAGCTGCCTCTCCGGCCGTAATTCTGGGAACAATCCTGGCAATGGCAGTGGTACAGGTTCTGGTGCATCTGGTGTGCTTCCTGCACATGAATACCAAATCAGATGAAGGCTGGAACATGACGGCGTTTGTCTTCACCGTGCTAATCATCGCTATCCTGGTTGTAGGCTCCATCTGGATTATGTGGAACCTCAACTACAACATGATGATGCACTAA", + "dna_sequence_length": 330, + "functions": [ + "cytochrome o ubiquinol oxidase subunit IV" + ], + "id": "CDS_422", + "location": [ + [ + "NC_000913", + 448046, + "-", + 330 + ] + ], + "md5": "05cf5454dec4ca0ff0f6997b6e4192ab", + "parent_gene": "", + "protein_md5": "0716002e1951c2c2400be1af5dd06537", + "protein_translation": "MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001491" + ], + [ + "gene_synonym", + "ECK0424" + ], + [ + "gene_synonym", + "EcoGene:EG10180" + ], + [ + "gene_synonym", + "GI:16128415" + ], + [ + "gene_synonym", + "GeneID:946897" + ], + [ + "gene_synonym", + "JW0420" + ], + [ + "gene_synonym", + "NP_414964.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABJ3" + ], + [ + "gene_synonym", + "b0430" + ], + [ + "gene_synonym", + "cyoC" + ] + ], + "dna_sequence": "ATGGCAACTGATACTTTGACGCACGCGACTGCCCACGCGCACGAACACGGGCACCACGATGCAGGCGGAACCAAAATCTTCGGATTTTGGATCTACCTGATGAGCGACTGCATTCTGTTCTCTATCTTGTTTGCTACCTATGCCGTTCTGGTGAACGGCACCGCAGGCGGCCCGACAGGTAAGGACATTTTCGAACTGCCGTTCGTTCTGGTTGAAACTTTCTTGCTGTTGTTCAGCTCCATCACCTACGGCATGGCGGCTATCGCCATGTACAAAAACAACAAAAGCCAGGTTATCTCCTGGCTGGCGTTGACCTGGTTGTTTGGTGCCGGATTTATCGGGATGGAAATCTATGAATTCCATCACCTGATTGTTAACGGCATGGGTCCGGATCGCAGCGGCTTCCTGTCAGCGTTCTTTGCGCTGGTCGGCACGCACGGTCTGCACGTCACTTCTGGTCTTATCTGGATGGCGGTGCTGATGGTGCAAATCGCCCGTCGCGGCCTGACCAGCACTAACCGTACCCGCATCATGTGCCTGAGCCTGTTCTGGCACTTCCTGGATGTGGTTTGGATCTGTGTGTTCACTGTTGTTTATCTGATGGGGGCGATGTAA", + "dna_sequence_length": 615, + "functions": [ + "cytochrome o ubiquinol oxidase subunit III" + ], + "id": "CDS_423", + "location": [ + [ + "NC_000913", + 448660, + "-", + 615 + ] + ], + "md5": "d9d662ec28876f760ab5370e31151317", + "parent_gene": "", + "protein_md5": "8404e23b100d4aba614871681fcc1a72", + "protein_translation": "MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001493" + ], + [ + "gene_synonym", + "ECK0425" + ], + [ + "gene_synonym", + "EcoGene:EG10179" + ], + [ + "gene_synonym", + "GI:16128416" + ], + [ + "gene_synonym", + "GeneID:945615" + ], + [ + "gene_synonym", + "JW0421" + ], + [ + "gene_synonym", + "NP_414965.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABI8" + ], + [ + "gene_synonym", + "b0431" + ], + [ + "gene_synonym", + "cyoB" + ] + ], + "dna_sequence": "ATGTTCGGAAAATTATCACTTGATGCAGTCCCGTTCCATGAACCTATCGTCATGGTTACGATCGCTGGCATTATTTTGGGAGGTCTGGCGCTCGTTGGCCTGATCACTTACTTCGGTAAGTGGACCTACCTGTGGAAAGAGTGGCTGACCTCCGTCGACCATAAACGCCTCGGTATCATGTATATCATCGTGGCGATTGTGATGTTGCTGCGTGGTTTTGCTGACGCCATTATGATGCGTAGCCAGCAGGCTCTTGCCTCGGCGGGCGAAGCGGGCTTCCTGCCACCTCACCACTACGATCAGATCTTTACCGCGCACGGCGTGATTATGATCTTCTTCGTGGCGATGCCTTTCGTTATCGGTCTGATGAACCTGGTGGTTCCGCTGCAGATCGGCGCGCGTGACGTTGCGTTCCCGTTCCTCAACAACTTAAGCTTCTGGTTTACCGTTGTTGGTGTGATTCTGGTTAACGTTTCTCTCGGCGTGGGCGAATTTGCGCAGACCGGCTGGCTGGCCTATCCACCGCTATCGGGAATAGAGTACAGTCCGGGAGTCGGTGTCGATTACTGGATATGGAGTCTCCAGCTATCCGGTATAGGTACGACGCTTACCGGTATCAACTTCTTCGTTACCATTCTGAAGATGCGCGCACCGGGCATGACCATGTTCAAGATGCCAGTATTTACCTGGGCATCACTGTGCGCGAACGTACTGATTATTGCTTCCTTCCCAATTCTGACGGTTACCGTCGCGTTGTTGACCCTGGATCGCTATCTGGGCACCCATTTCTTTACCAACGATATGGGTGGCAACATGATGATGTACATCAACCTGATTTGGGCCTGGGGCCACCCGGAAGTTTACATCCTGATCCTGCCTGTTTTCGGTGTGTTCTCCGAAATTGCGGCAACCTTCTCGCGTAAACGTCTGTTTGGTTATACCTCGCTGGTATGGGCAACCGTCTGTATCACCGTGCTGTCGTTCATCGTTTGGCTGCACCACTTCTTTACGATGGGTGCGGGCGCGAACGTAAACGCCTTCTTTGGTATCACCACAATGATTATCGCCATCCCGACCGGGGTGAAGATCTTCAACTGGCTGTTCACCATGTATCAGGGCCGCATCGTGTTCCATTCTGCGATGCTGTGGACCATCGGTTTTATCGTCACCTTCTCGGTGGGCGGGATGACTGGCGTGCTGCTGGCCGTACCGGGCGCGGACTTCGTTCTGCATAACAGCCTGTTCCTGATTGCGCACTTCCATAACGTGATCATCGGCGGCGTGGTCTTCGGCTGCTTCGCAGGGATGACCTACTGGTGGCCTAAAGCGTTCGGTTTCAAACTGAACGAAACCTGGGGTAAACGCGCGTTCTGGTTCTGGATCATCGGCTTCTTCGTTGCCTTTATGCCACTGTATGCGCTGGGCTTCATGGGCATGACCCGTCGTTTGAGCCAGCAGATTGACCCGCAGTTCCACACCATGCTGATGATTGCAGCCAGCGGTGCAGTACTGATTGCGCTGGGTATTCTCTGCCTCGTTATTCAGATGTACGTTTCTATTCGCGACCGCGACCAGAACCGTGACCTGACTGGCGACCCGTGGGGTGGCCGTACGCTGGAGTGGGCAACCTCTTCCCCGCCTCCGTTCTATAACTTTGCCGTAGTGCCGCACGTTCACGAACGTGATGCATTCTGGGAAATGAAAGAGAAAGGCGAAGCGTATAAAAAGCCTGACCACTATGAAGAAATTCATATGCCGAAAAACAGCGGTGCAGGTATCGTCATTGCAGCTTTCTCCACCATCTTCGGTTTCGCCATGATCTGGCATATCTGGTGGCTGGCGATTGTTGGCTTCGCAGGCATGATCATCACCTGGATCGTGAAAAGCTTCGACGAGGACGTGGATTACTACGTGCCGGTGGCAGAAATCGAAAAACTGGAAAACCAGCATTTCGATGAGATTACTAAGGCAGGGCTGAAAAATGGCAACTGA", + "dna_sequence_length": 1992, + "functions": [ + "cytochrome o ubiquinol oxidase subunit I" + ], + "id": "CDS_424", + "location": [ + [ + "NC_000913", + 450641, + "-", + 1992 + ] + ], + "md5": "014865a4b7409fbb7430b0083b5399f7", + "parent_gene": "", + "protein_md5": "d538bcaafd2c39381572efd93acd371d", + "protein_translation": "MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN", + "protein_translation_length": 663, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001495" + ], + [ + "gene_synonym", + "ECK0426" + ], + [ + "gene_synonym", + "EcoGene:EG10178" + ], + [ + "gene_synonym", + "GI:16128417" + ], + [ + "gene_synonym", + "GeneID:945080" + ], + [ + "gene_synonym", + "JW0422" + ], + [ + "gene_synonym", + "NP_414966.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABJ1" + ], + [ + "gene_synonym", + "b0432" + ], + [ + "gene_synonym", + "cyoA" + ] + ], + "dna_sequence": "ATGAGACTCAGGAAATACAATAAAAGTTTGGGATGGTTGTCATTATTTGCAGGCACTGTATTGCTCAGTGGCTGTAATTCTGCGCTGTTAGATCCCAAAGGACAGATTGGTCTGGAGCAACGTTCACTGATACTGACGGCATTTGGCCTGATGTTGATTGTCGTTATTCCCGCAATCTTGATGGCTGTTGGTTTCGCCTGGAAGTACCGTGCGAGCAATAAAGATGCTAAGTACAGCCCGAACTGGTCACACTCCAATAAAGTGGAAGCTGTGGTCTGGACGGTACCTATCTTAATCATCATCTTCCTTGCAGTACTGACCTGGAAAACCACTCACGCTCTTGAGCCTAGCAAGCCGCTGGCACACGACGAGAAGCCCATTACCATCGAAGTGGTTTCCATGGACTGGAAATGGTTCTTCATCTACCCGGAACAGGGCATTGCTACCGTGAATGAAATCGCTTTCCCGGCGAACACTCCGGTGTACTTCAAAGTGACCTCCAACTCCGTGATGAACTCCTTCTTCATTCCGCGTCTGGGTAGCCAGATTTATGCCATGGCCGGTATGCAGACTCGCCTGCATCTGATCGCCAACGAACCCGGCACTTATGACGGTATCTCCGCCAGCTACAGCGGCCCGGGCTTCTCAGGCATGAAGTTCAAAGCTATTGCAACACCGGATCGCGCCGCATTCGACCAGTGGGTCGCAAAAGCGAAGCAGTCGCCGAACACCATGTCTGACATGGCTGCGTTCGAAAAACTGGCCGCGCCTAGCGAATACAACCAGGTGGAATATTTCTCCAACGTGAAACCAGACTTGTTTGCCGATGTAATTAACAAGTTTATGGCTCACGGTAAGAGCATGGACATGACCCAGCCAGAAGGTGAGCACAGCGCACACGAAGGTATGGAAGGCATGGACATGAGCCACGCGGAATCCGCCCATTAA", + "dna_sequence_length": 948, + "functions": [ + "cytochrome o ubiquinol oxidase subunit II" + ], + "id": "CDS_425", + "location": [ + [ + "NC_000913", + 451610, + "-", + 948 + ] + ], + "md5": "8ec52a341cd8d4fa76b4b654aac55371", + "parent_gene": "", + "protein_md5": "925c1148bd9b451cefa9b48d96afa4ef", + "protein_translation": "MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001501" + ], + [ + "gene_synonym", + "ECK0427" + ], + [ + "gene_synonym", + "EcoGene:EG12183" + ], + [ + "gene_synonym", + "GI:16128418" + ], + [ + "gene_synonym", + "GeneID:946438" + ], + [ + "gene_synonym", + "JW0423" + ], + [ + "gene_synonym", + "NP_414967.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE16" + ], + [ + "gene_synonym", + "ampG" + ], + [ + "gene_synonym", + "b0433" + ] + ], + "dna_sequence": "ATGTCCAGTCAATATTTACGTATTTTTCAACAGCCGCGTTCAGCCATATTGCTGATCCTGGGTTTTGCTTCCGGGCTACCGCTCGCCCTGACATCCGGTACCTTACAGGCCTGGATGACGGTCGAGAATATCGATCTCAAAACCATTGGTTTCTTCTCTCTGGTAGGCCAGGCTTACGTTTTTAAATTCCTCTGGTCACCGCTGATGGACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCGCCACGCAAATCCTGTTATTAGTCGCCATTGCGGCGATGGGTTTTCTCGAACCAGGCACCCAACTCCGCTGGATGGCGGCGCTGGCAGTGGTGATCGCTTTTTGCTCTGCTTCCCAGGATATAGTCTTCGATGCGTGGAAAACCGATGTGCTTCCGGCAGAAGAACGTGGTGCGGGCGCGGCAATCAGCGTGCTGGGTTACCGTTTAGGGATGCTGGTTTCCGGCGGCCTAGCCCTGTGGCTGGCAGATAAATGGCTGGGCTGGCAGGGCATGTACTGGTTAATGGCGGCACTGTTGATCCCCTGTATTATCGCGACGTTGCTTGCACCAGAACCAACCGACACCATTCCTGTGCCCAAAACGCTGGAACAAGCGGTTGTTGCACCTCTGCGAGATTTCTTTGGTCGCAATAATGCCTGGCTTATTTTGCTTCTTATCGTGCTGTATAAGCTGGGCGACGCATTCGCCATGAGCCTGACAACCACGTTTTTGATTCGCGGCGTCGGGTTTGATGCGGGTGAAGTAGGCGTGGTTAACAAAACGCTTGGCTTACTAGCGACCATTGTTGGCGCATTGTACGGTGGGATTTTGATGCAGCGCCTGTCACTGTTCCGGGCACTGCTGATTTTCGGCATTTTACAAGGTGCGTCTAACGCCGGTTACTGGCTGCTGTCGATTACTGATAAGCATCTCTACAGCATGGGCGCAGCCGTCTTTTTCGAAAACCTCTGTGGCGGGATGGGCACATCAGCCTTTGTCGCGCTGTTAATGACGCTATGTAATAAGTCATTTTCCGCTACTCAATTTGCCCTGCTCTCAGCGCTTTCTGCTGTAGGGCGAGTTTATGTCGGCCCCGTGGCGGGTTGGTTTGTTGAAGCACACGGCTGGTCGACATTCTATCTATTCTCCGTCGCCGCTGCCGTACCAGGGCTTATTTTGCTGCTGGTTTGCCGCCAGACGCTTGAATATACACGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCGGGCGTCAGCCTGTTGGCCGTGTGGTTACTGCTATTGACGATGGACGCGCTGGATTTGACGCACTTCTCTTTCCTGCCTGCTCTGCTGGAAGTCGGGGTTTTAGTCGCCCTTTCTGGCGTCGTGCTTGGTGGTTTGCTGGATTATCTGGCGCTACGAAAAACGCATCTGACGTAA", + "dna_sequence_length": 1476, + "functions": [ + "muropeptide transporter" + ], + "id": "CDS_426", + "location": [ + [ + "NC_000913", + 453545, + "-", + 1476 + ] + ], + "md5": "1b8605fd5886f114bf0f67ab36ef98de", + "parent_gene": "", + "protein_md5": "85fc465b9030eba1ce9ecdb1f2b5e057", + "protein_translation": "MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001504" + ], + [ + "gene_synonym", + "ECK0428" + ], + [ + "gene_synonym", + "EcoGene:EG12182" + ], + [ + "gene_synonym", + "GI:90111134" + ], + [ + "gene_synonym", + "GeneID:945521" + ], + [ + "gene_synonym", + "JW0424" + ], + [ + "gene_synonym", + "NP_414968.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADA5" + ], + [ + "gene_synonym", + "b0434" + ], + [ + "gene_synonym", + "yajG" + ] + ], + "dna_sequence": "ATGTTCAAAAAAATCCTCTTCCCGTTAGTTGCTCTGTTTATGCTTGCAGGATGCGCAAAACCGCCAACAACTATTGAAGTTTCCCCGACGATTACACTGCCACAGCAGGATCCAAGCCTGATGGGCGTCACCGTAAGCATTAATGGTGCCGATCAGCGTACCGATCAGGCGCTGGCAAAAGTCACCCGCGATAATCAAATCGTTACCCTGACCGCCTCCCGCGATCTGCGTTTCCTGCTGCAAGAAGTGCTGGAAAAACAGATGACCGCGCGTGGTTACATGGTTGGTCCGAATGGCCCGGTTAATCTGCAAATCATCGTTAGCCAACTGTATGCTGACGTGTCCCAGGGCAACGTGCGCTACAACATCGCGACCAAAGCGGATATCGCCATCATCGCTACCGCGCAGAATGGCAACAAAATGACCAAAAACTATCGTGCCAGCTACAACGTTGAAGGTGCGTTCCAGGCCTCCAACAAAAATATCGCCGATGCGGTTAACAGTGTGCTGACCGATACCATCGCTGATATGTCTCAGGACACCAGCATCCACGAATTCATCAAGCAGAACGCGCGTTAA", + "dna_sequence_length": 579, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_427", + "location": [ + [ + "NC_000913", + 454167, + "-", + 579 + ] + ], + "md5": "a704c8d4400e294198f9b6be2ab1cb63", + "parent_gene": "", + "protein_md5": "787304e09e3cef09c640759772fd43e4", + "protein_translation": "MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001508" + ], + [ + "gene_synonym", + "ECK0429" + ], + [ + "gene_synonym", + "EcoGene:EG10125" + ], + [ + "gene_synonym", + "GI:90111135" + ], + [ + "gene_synonym", + "GeneID:947043" + ], + [ + "gene_synonym", + "JW5060" + ], + [ + "gene_synonym", + "NP_414969.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABE2" + ], + [ + "gene_synonym", + "b0435" + ], + [ + "gene_synonym", + "bolA" + ] + ], + "dna_sequence": "ATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAA", + "dna_sequence_length": 318, + "functions": [ + "stationary-phase morphogene, transcriptional repressor for mreB", + "also regulator for dacA, dacC, and ampC" + ], + "id": "CDS_428", + "location": [ + [ + "NC_000913", + 454472, + "+", + 318 + ] + ], + "md5": "b626990ab9fefcca5e2a2ce030f9884d", + "parent_gene": "", + "protein_md5": "a3aebedd25ddedfe1ade83d1e8475627", + "protein_translation": "MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGSIA", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001511" + ], + [ + "gene_synonym", + "ECK0430" + ], + [ + "gene_synonym", + "EcoGene:EG11003" + ], + [ + "gene_synonym", + "GI:16128421" + ], + [ + "gene_synonym", + "GeneID:945081" + ], + [ + "gene_synonym", + "JW0426" + ], + [ + "gene_synonym", + "NP_414970.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A850" + ], + [ + "gene_synonym", + "b0436" + ], + [ + "gene_synonym", + "tig" + ] + ], + "dna_sequence": "ATGCAAGTTTCAGTTGAAACCACTCAAGGCCTTGGCCGCCGTGTAACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATTGACGCCATCATTAAAGAAAAAATCAATCCGGCTGGCGCACCGACTTATGTTCCGGGCGAATACAAGCTGGGTGAAGACTTCACTTACTCTGTAGAGTTTGAAGTTTATCCGGAAGTTGAACTGCAGGGTCTGGAAGCGATCGAAGTTGAAAAACCGATCGTTGAAGTGACCGACGCTGACGTTGACGGCATGCTGGATACTCTGCGTAAACAGCAGGCGACCTGGAAAGAAAAAGACGGCGCTGTTGAAGCAGAAGACCGCGTAACCATCGACTTCACCGGTTCTGTAGACGGCGAAGAGTTCGAAGGCGGTAAAGCGTCTGATTTCGTACTGGCGATGGGCCAGGGTCGTATGATCCCGGGCTTTGAAGACGGTATCAAAGGCCACAAAGCTGGCGAAGAGTTCACCATCGACGTGACCTTCCCGGAAGAATACCACGCAGAAAACCTGAAAGGTAAAGCAGCGAAATTCGCTATCAACCTGAAGAAAGTTGAAGAGCGTGAACTGCCGGAACTGACTGCAGAATTCATCAAACGTTTCGGCGTTGAAGATGGTTCCGTAGAAGGTCTGCGCGCTGAAGTGCGTAAAAACATGGAGCGCGAGCTGAAGAGCGCCATCCGTAACCGCGTTAAGTCTCAGGCGATCGAAGGTCTGGTAAAAGCTAACGACATCGACGTACCGGCTGCGCTGATCGACAGCGAAATCGACGTTCTGCGTCGCCAGGCTGCACAGCGTTTCGGTGGCAACGAAAAACAAGCTCTGGAACTGCCGCGCGAACTGTTCGAAGAACAGGCTAAACGCCGCGTAGTTGTTGGCCTGCTGCTGGGCGAAGTTATCCGCACCAACGAGCTGAAAGCTGACGAAGAGCGCGTGAAAGGCCTGATCGAAGAGATGGCTTCTGCGTACGAAGATCCGAAAGAAGTTATCGAGTTCTACAGCAAAAACAAAGAACTGATGGACAACATGCGCAATGTTGCTCTGGAAGAACAGGCTGTTGAAGCTGTACTGGCGAAAGCGAAAGTGACTGAAAAAGAAACCACTTTCAACGAGCTGATGAACCAGCAGGCGTAA", + "dna_sequence_length": 1299, + "functions": [ + "peptidyl-prolyl cis/trans isomerase (trigger factor)" + ], + "id": "CDS_429", + "location": [ + [ + "NC_000913", + 455133, + "+", + 1299 + ] + ], + "md5": "12ccb2eca1d238b42ba08f139fa2e94e", + "parent_gene": "", + "protein_md5": "be175fae90c64d4e251742b3a98a8abe", + "protein_translation": "MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001515" + ], + [ + "gene_synonym", + "ECK0431" + ], + [ + "gene_synonym", + "EcoGene:EG10158" + ], + [ + "gene_synonym", + "GI:16128422" + ], + [ + "gene_synonym", + "GeneID:945082" + ], + [ + "gene_synonym", + "JW0427" + ], + [ + "gene_synonym", + "NP_414971.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6G7" + ], + [ + "gene_synonym", + "b0437" + ], + [ + "gene_synonym", + "clpP" + ], + [ + "gene_synonym", + "lopP" + ], + [ + "gene_synonym", + "wseA" + ] + ], + "dna_sequence": "ATGTCATACAGCGGCGAACGAGATAACTTTGCACCCCATATGGCGCTGGTGCCGATGGTCATTGAACAGACCTCACGCGGTGAGCGCTCTTTTGATATCTATTCTCGTCTACTTAAGGAACGCGTCATTTTTCTGACTGGCCAGGTTGAAGACCACATGGCTAACCTGATTGTGGCGCAGATGCTGTTCCTGGAAGCGGAAAACCCAGAAAAAGATATCTATCTGTACATTAACTCCCCAGGCGGGGTGATCACTGCCGGGATGTCTATCTATGACACCATGCAGTTTATCAAGCCTGATGTCAGCACCATCTGTATGGGCCAGGCGGCCTCGATGGGCGCTTTCTTGCTGACCGCAGGGGCAAAAGGTAAACGTTTTTGCCTGCCGAATTCGCGCGTGATGATTCACCAACCGTTGGGCGGCTACCAGGGCCAGGCGACCGATATCGAAATTCATGCCCGTGAAATTCTGAAAGTTAAAGGGCGCATGAATGAACTTATGGCGCTTCATACGGGTCAATCATTAGAACAGATTGAACGTGATACCGAGCGCGATCGCTTCCTTTCCGCCCCTGAAGCGGTGGAATACGGTCTGGTCGATTCGATTCTGACCCATCGTAATTGA", + "dna_sequence_length": 624, + "functions": [ + "proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases" + ], + "id": "CDS_430", + "location": [ + [ + "NC_000913", + 456677, + "+", + 624 + ] + ], + "md5": "a04fb072d6281eda2a6b9228c9c71503", + "parent_gene": "", + "protein_md5": "c80cda9efd4d78c152403bd0ab9e6143", + "protein_translation": "MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001517" + ], + [ + "gene_synonym", + "ECK0432" + ], + [ + "gene_synonym", + "EcoGene:EG10159" + ], + [ + "gene_synonym", + "GI:16128423" + ], + [ + "gene_synonym", + "GeneID:945083" + ], + [ + "gene_synonym", + "JW0428" + ], + [ + "gene_synonym", + "NP_414972.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6H1" + ], + [ + "gene_synonym", + "b0438" + ], + [ + "gene_synonym", + "clpX" + ], + [ + "gene_synonym", + "lopC" + ] + ], + "dna_sequence": "ATGACAGATAAACGCAAAGATGGCTCAGGCAAATTGCTGTATTGCTCTTTTTGCGGCAAAAGCCAGCATGAAGTGCGCAAGCTGATTGCCGGTCCATCCGTGTATATCTGCGACGAATGTGTTGATTTATGTAACGACATCATTCGCGAAGAGATTAAAGAAGTTGCACCGCATCGTGAACGCAGTGCGCTACCGACGCCGCATGAAATTCGCAACCACCTGGACGATTACGTTATCGGCCAGGAACAGGCGAAAAAAGTGCTGGCGGTCGCGGTATACAACCATTACAAACGTCTGCGCAACGGCGATACCAGCAATGGCGTCGAGTTGGGCAAAAGTAACATTCTGCTGATCGGTCCGACCGGTTCCGGTAAAACGCTGCTGGCTGAAACGCTGGCGCGCCTGCTGGATGTTCCGTTCACCATGGCCGACGCGACTACACTGACCGAAGCCGGTTATGTGGGTGAAGACGTTGAAAACATCATTCAGAAGCTGTTGCAGAAATGCGACTACGATGTCCAGAAAGCACAGCGTGGTATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGCATTGGTTTTGGCGCGACGGTAAAAGCGAAGTCCGACAAAGCAAGCGAAGGCGAGCTGCTGGCGCAGGTTGAACCGGAAGATCTGATCAAGTTTGGTCTTATCCCTGAGTTTATTGGTCGTCTGCCGGTTGTCGCAACGTTGAATGAACTGAGCGAAGAAGCTCTGATTCAGATCCTCAAAGAGCCGAAAAACGCCCTGACCAAGCAGTATCAGGCGCTGTTTAATCTGGAAGGCGTGGATCTGGAATTCCGTGACGAGGCGCTGGATGCTATCGCTAAGAAAGCGATGGCGCGTAAAACCGGTGCCCGTGGCCTGCGTTCCATCGTAGAAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAA", + "dna_sequence_length": 1275, + "functions": [ + "ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease" + ], + "id": "CDS_431", + "location": [ + [ + "NC_000913", + 457426, + "+", + 1275 + ] + ], + "md5": "e9d91f74f06554708f9525a0be7278c2", + "parent_gene": "", + "protein_md5": "a012cfd0e4de441348271c672b888a8a", + "protein_translation": "MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQASGE", + "protein_translation_length": 424, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001521" + ], + [ + "gene_synonym", + "ECK0433" + ], + [ + "gene_synonym", + "EcoGene:EG10542" + ], + [ + "gene_synonym", + "GI:16128424" + ], + [ + "gene_synonym", + "GeneID:945085" + ], + [ + "gene_synonym", + "JW0429" + ], + [ + "gene_synonym", + "NP_414973.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9M0" + ], + [ + "gene_synonym", + "b0439" + ], + [ + "gene_synonym", + "capR" + ], + [ + "gene_synonym", + "deg" + ], + [ + "gene_synonym", + "dir" + ], + [ + "gene_synonym", + "lon" + ], + [ + "gene_synonym", + "lonA" + ], + [ + "gene_synonym", + "lopA" + ], + [ + "gene_synonym", + "muc" + ] + ], + "dna_sequence": "ATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCTTTTCACCGTCGGGACCGTGGCCTCTATATTGCAGATGCTGAAACTGCCTGACGGCACCGTCAAAGTGCTGGTCGAGGGGTTACAGCGCGCGCGTATTTCTGCGCTCTCTGACAATGGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGCGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGGGTAGGTAAAACCTCTCTTGGTCAGTCCATTGCCAAAGCCACCGGGCGTAAATATGTCCGTATGGCGCTGGGCGGCGTGCGTGATGAAGCGGAAATCCGTGGTCACCGCCGTACTTACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTCGACGATAGCGCCATTATCGGCATTATTCGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAATCTCCAAACTGTGTCGCAAAGCGGTTAAGCAGTTACTGCTCGATAAGTCATTAAAACATATCGAAATTAACGGCGATAACCTGCATGACTATCTCGGTGTTCAGCGTTTCGACTATGGTCGCGCGGATAACGAAAACCGTGTCGGTCAGGTAACCGGTCTGGCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACATCCACGTCCACGTACCGGAAGGTGCGACGCCGAAAGATGGTCCGAGTGCCGGTATTGCTATGTGCACCGCGCTGGTTTCTTGCCTGACCGGTAACCCGGTTCGTGCCGATGTGGCAATGACCGGTGAGATCACTCTGCGTGGTCAGGTACTGCCGATCGGTGGTTTGAAAGAAAAACTCCTGGCAGCGCATCGCGGCGGGATTAAAACAGTGCTAATTCCGTTCGAAAATAAACGCGATCTGGAAGAGATTCCTGACAACGTAATTGCCGATCTGGACATTCATCCTGTGAAGCGCATTGAGGAAGTTCTGACTCTGGCGCTGCAAAATGAACCGTCTGGTATGCAGGTTGTGACTGCAAAATAG", + "dna_sequence_length": 2355, + "functions": [ + "DNA-binding ATP-dependent protease La" + ], + "id": "CDS_432", + "location": [ + [ + "NC_000913", + 458888, + "+", + 2355 + ] + ], + "md5": "08a7aa9d3a4147a87fec03404906c66f", + "parent_gene": "", + "protein_md5": "ce48f6ed2f5ed052d5b4c46400f3e1d6", + "protein_translation": "MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK", + "protein_translation_length": 784, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001527" + ], + [ + "gene_synonym", + "ECK0434" + ], + [ + "gene_synonym", + "EcoGene:EG10467" + ], + [ + "gene_synonym", + "GI:16128425" + ], + [ + "gene_synonym", + "GeneID:949095" + ], + [ + "gene_synonym", + "JW0430" + ], + [ + "gene_synonym", + "NP_414974.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACF4" + ], + [ + "gene_synonym", + "b0440" + ], + [ + "gene_synonym", + "dpeA" + ], + [ + "gene_synonym", + "hopD" + ], + [ + "gene_synonym", + "hupB" + ] + ], + "dna_sequence": "GTGAATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAAGAGATCACCATCGCTGCTGCTAAAGTACCGAGCTTCCGTGCAGGTAAAGCACTGAAAGACGCGGTAAACTAA", + "dna_sequence_length": 273, + "functions": [ + "HU, DNA-binding transcriptional regulator, beta subunit" + ], + "id": "CDS_433", + "location": [ + [ + "NC_000913", + 461451, + "+", + 273 + ] + ], + "md5": "07f961da3806a711015aa00a7d9b723a", + "parent_gene": "", + "protein_md5": "f008373a488a46c105e95fdfb99fa95a", + "protein_translation": "MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001531" + ], + [ + "gene_synonym", + "ECK0435" + ], + [ + "gene_synonym", + "EcoGene:EG13249" + ], + [ + "gene_synonym", + "GI:16128426" + ], + [ + "gene_synonym", + "GeneID:946056" + ], + [ + "gene_synonym", + "JW0431" + ], + [ + "gene_synonym", + "NP_414975.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADY1" + ], + [ + "gene_synonym", + "b0441" + ], + [ + "gene_synonym", + "ppiD" + ], + [ + "gene_synonym", + "ybaU" + ] + ], + "dna_sequence": "ATGATGGACAGCTTACGCACGGCTGCAAACAGTCTCGTGCTCAAGATTATTTTCGGTATCATTATCGTGTCGTTCATATTGACCGGCGTGAGTGGTTACCTGATTGGCGGAGGCAATAACTACGCCGCAAAAGTGAATGACCAGGAAATCAGCCGTGGGCAATTCGAGAACGCCTTCAACAGCGAGCGTAATCGCATGCAGCAACAGCTGGGCGATCAATACTCCGAGCTGGCAGCGAACGAAGGCTATATGAAAACCCTGCGTCAACAGGTGCTGAATCGTCTGATCGACGAGGCGCTGCTGGATCAGTACGCACGTGAGCTGAAACTGGGTATCAGCGATGAGCAGGTTAAACAGGCGATTTTCGCGACCCCAGCCTTCCAGGTTGACGGCAAATTTGATAACAGCCGCTATAACGGTATCCTCAACCAGATGGGGATGACCGCCGATCAGTACGCCCAGGCGCTGCGTAACCAGCTCACTACCCAACAGCTGATTAACGGCGTTGCCGGTACCGATTTTATGCTGAAAGGTGAAACCGACGAGCTGGCGGCACTGGTCGCGCAACAACGCGTGGTGCGTGAGGCGACTATCGATGTTAACGCGCTGGCGGCGAAGCAGCCTGTGACCGAACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCATCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGATTTTGCTGCATTAGCCAAAGAAAAATCTGCCGATATTATCTCTGCTCGTAACGGCGGCGATATGGGTTGGTTAGAAGATGCCACTATCCCGGACGAACTGAAAAATGCTGGTCTGAAAGAAAAAGGCCAACTGTCTGGTGTCATCAAATCTTCGGTCGGTTTCCTGATTGTACGTCTGGACGACATTCAGCCAGCGAAAGTGAAATCGTTAGACGAAGTACGTGACGACATTGCGGCGAAAGTGAAACACGAAAAAGCCCTCGATGCGTACTACGCGCTGCAGCAGAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGTTAAGGCATTGGTTCAGCACAACAAAGCTGAACAACAGGCGAAAGTGGATGCTGAGAAACTGCTGGTTGATTTGAAAGCCGGCAAAGGTGCGGAAGCTATGCAGGCTGCCGGTCTGAAATTTGGCGAGCCGAAAACCTTAAGCCGTTCCGGTCGTGACCCGATTAGCCAGGCGGCGTTTGCACTGCCACTGCCAGCGAAAGACAAACCGAGCTACGGTATGGCGACCGATATGCAAGGTAATGTGGTTCTGCTGGCGCTGGATGAAGTGAAACAAGGTTCAATGCCGGAAGATCAGAAAAAAGCGATGGTGCAGGGTATCACCCAGAACAACGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAA", + "dna_sequence_length": 1872, + "functions": [ + "periplasmic folding chaperone, has an inactive PPIase domain" + ], + "id": "CDS_434", + "location": [ + [ + "NC_000913", + 461915, + "+", + 1872 + ] + ], + "md5": "3511a15e9a805fb3e22fd4d2d8918d3e", + "parent_gene": "", + "protein_md5": "6107950a8bfdc532059d2b072baf9356", + "protein_translation": "MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ", + "protein_translation_length": 623, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001534" + ], + [ + "gene_synonym", + "ECK0436" + ], + [ + "gene_synonym", + "EcoGene:EG13250" + ], + [ + "gene_synonym", + "GI:16128427" + ], + [ + "gene_synonym", + "GeneID:945884" + ], + [ + "gene_synonym", + "JW0432" + ], + [ + "gene_synonym", + "NP_414976.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR8" + ], + [ + "gene_synonym", + "b0442" + ], + [ + "gene_synonym", + "ybaV" + ] + ], + "dna_sequence": "ATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAATGTCTCATAGCGCGCTGGCGGCAGCTTCTGTGGCGAAACCGACGGCGGTAGAAACCAAAGCGGAAGCTCCTGCAGCACAAAGTAAAGCAGCAGTACCGGCGAAAGCCAGTGACGAAGAAGGCACCCGGGTCAGCATTAATAATGCCAGCGCGGAAGAGCTAGCCCGCGCGATGAATGGCGTTGGCCTGAAGAAAGCGCAGGCGATTGTCAGTTATCGCGAAGAGTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAA", + "dna_sequence_length": 372, + "functions": [ + "putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein" + ], + "id": "CDS_435", + "location": [ + [ + "NC_000913", + 463937, + "+", + 372 + ] + ], + "md5": "5d36a6b7c2dc14c58dacc961b64e3bdb", + "parent_gene": "", + "protein_md5": "2477d7b9334dff9d96e1432da8410d67", + "protein_translation": "MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL", + "protein_translation_length": 123, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001537" + ], + [ + "gene_synonym", + "ECK0437" + ], + [ + "gene_synonym", + "EcoGene:EG13251" + ], + [ + "gene_synonym", + "GI:16128428" + ], + [ + "gene_synonym", + "GeneID:945812" + ], + [ + "gene_synonym", + "JW0433" + ], + [ + "gene_synonym", + "NP_414977.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77712" + ], + [ + "gene_synonym", + "b0443" + ], + [ + "gene_synonym", + "fadM" + ], + [ + "gene_synonym", + "tesC" + ], + [ + "gene_synonym", + "ybaW" + ] + ], + "dna_sequence": "ATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATGGGTTGGAAAATAGCGACAGTTTTCAGTGGATGACGGCCCATAACATCGCCTTCGTCGTGGTCAATATCAATATTAACTATCGTCGCCCAGCGGTATTAAGTGACCTGTTAACTATTACCAGTCAGTTGCAGCAATTAAACGGTAAAAGCGGCATCTTAAGCCAGGTCATTACACTGGAGCCGGAAGGGCAGGTGGTAGCGGATGCGCTTATTACGTTTGTTTGTATTGATCTTAAAACGCAGAAAGCATTAGCTCTGGAAGGGGAATTGCGCGAAAAGCTGGAGCAGATGGTTAAGTAA", + "dna_sequence_length": 399, + "functions": [ + "long-chain acyl-CoA thioesterase III" + ], + "id": "CDS_436", + "location": [ + [ + "NC_000913", + 464402, + "+", + 399 + ] + ], + "md5": "7a43b07c2164dfa55491c17aea587125", + "parent_gene": "", + "protein_md5": "14cb24435dc8036ccb3f450aa3bf50ec", + "protein_translation": "MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKALALEGELREKLEQMVK", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001539" + ], + [ + "gene_synonym", + "ECK0438" + ], + [ + "gene_synonym", + "EcoGene:EG13252" + ], + [ + "gene_synonym", + "GI:16128429" + ], + [ + "gene_synonym", + "GeneID:947034" + ], + [ + "gene_synonym", + "JW0434" + ], + [ + "gene_synonym", + "NP_414978.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77756" + ], + [ + "gene_synonym", + "b0444" + ], + [ + "gene_synonym", + "queC" + ], + [ + "gene_synonym", + "ybaX" + ] + ], + "dna_sequence": "ATGAAACGTGCTGTCGTTGTGTTCAGTGGAGGTCAGGATTCCACCACCTGTCTGGTGCAGGCATTACAACAATATGATGAAGTCCATTGCGTGACGTTCGATTACGGTCAGCGGCATCGCGCAGAAATCGACGTGGCACGCGAACTGGCGCTGAAACTGGGGGCACGCGCGCATAAGGTGCTGGATGTCACCCTGCTCAACGAGCTGGCGGTCAGTAGCCTGACGCGTGACAGCATTCCGGTGCCTGATTATGAACCTGAAGCCGATGGTATCCCGAATACGTTTGTCCCAGGGCGTAATATTTTGTTCCTGACGCTGGCGGCAATATATGCGTATCAGGTAAAAGCAGAAGCCGTAATTACTGGCGTCTGCGAAACGGATTTCTCCGGCTACCCGGATTGCCGCGATGAGTTTGTGAAAGCACTAAACCATGCCGTCAGTTTGGGCATGGCGAAAGATATTCGTTTTGAAACGCCGCTGATGTGGATTGATAAAGCGGAAACCTGGGCGCTGGCAGATTATTACGGCAAACTGGATTTAGTCCGTAACGAAACGTTGACCTGCTATAACGGCTTTAAAGGCGACGGTTGCGGTCATTGTGCGGCATGTAATTTACGCGCCAACGGTTTGAATCATTATCTGGCCGATAAACCGACGGTGATGGCAGCGATGAAGCAGAAAACCGGGTTGAGGTAA", + "dna_sequence_length": 696, + "functions": [ + "7-cyano-7-deazaguanine (preQ0) synthase", + "queuosine biosynthesis" + ], + "id": "CDS_437", + "location": [ + [ + "NC_000913", + 465547, + "-", + 696 + ] + ], + "md5": "40288c9b3b349b1eab9bf211f8887e7b", + "parent_gene": "", + "protein_md5": "e016ac1429a3f688333e890176de2690", + "protein_translation": "MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDLVRNETLTCYNGFKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLR", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001542" + ], + [ + "gene_synonym", + "ECK0439" + ], + [ + "gene_synonym", + "EcoGene:EG13217" + ], + [ + "gene_synonym", + "GI:16128430" + ], + [ + "gene_synonym", + "GeneID:949093" + ], + [ + "gene_synonym", + "JW0435" + ], + [ + "gene_synonym", + "NP_414979.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46890" + ], + [ + "gene_synonym", + "b0445" + ], + [ + "gene_synonym", + "ybaE" + ] + ], + "dna_sequence": "ATGCGATTGCTCAACCGTCTTAACCAGTATCAACGTCTGTGGCAACCTTCCGCCGGAAAGCCGCAAACCGTCACCGTCAGCGAACTGGCCGAACGCTGTTTTTGCAGCGAACGCCATGTTCGTACGCTGTTGCGTCAGGCACAGGAGGCGGGATGGCTGGAGTGGCAGGCGCAGTCAGGACGCGGAAAGCGCGGACAATTACGCTTTCTGGTCACGCCGGAATCGCTACGCAATGCGATGATGGAACAGGCACTGGAAACCGGAAAGCAGCAAGATGTGCTGGAGCTGGCGCAACTGGCCCCAGGTGAGCTGCGCACTCTGTTACAGCCGTTTATGGGCGGACAATGGCAAAACGATACACCCACGTTGCGTATTCCCTACTATCGCCCGCTCGAACCGCTACAACCAGGCTTTTTGCCCGGCCGTGCCGAGCAGCATCTCGCCGGGCAGATATTTTCCGGCCTGACCCGCTTCGATAATAATACTCAGCGCCCGATTGGCGATTTAGCGCATCACTGGGAAACCTCTACTGACGGGTTACGCTGGGACTTTTATCTTCGTTCAACCCTACACTGGCATAACGGCGATGCAGTAAAAGCCTCACACTTACACCAGCGATTATTGATGCTGTTACAACTGCCAGCACTGGATCAATTATTTATTAGCGTGAAGCGTATTGAAGTCACCCATCCGCAGTGTCTGACCTTCTTTTTACATCGCCCTGATTACTGGCTTGCGCACCGGCTGGCGAGCTATTGCAGCCATCTGGCGCATCCGCAATTCCCACTGATCGGCACGGGTCCTTTTCGCTTAACACAATTCACAGCAGAGCTGGTGCGCCTGGAAAGCCATGATTATTACCATTTACGTCATCCGCTGCTTAAAGCGGTTGAGTACTGGATAACTCCGCCGCTTTTCGAAAAAGATTTGGGAACCAGTTGTCGGCATCCCGTGCAAATCACCATCGGCAAACCGGAGGAGCTGCAACGGGTCAGCCAGGTCAGTAGCGGCATCAGTTTAGGTTTTTGCTATTTGACGTTGCGCAAAAGTCCCCGACTCTCCCTCTGGCAGGCGCGAAAAGTGATCTCCATTATTCATCAATCCGGTTTATTACAAACGTTAGAAGTCGGAGAAAACCTGATCACCGCCAGTCATGCATTACTGCCAGGCTGGACTATTCCGCATTGGCAGGTACCGGATGAAGTCAAACTACCGAAAACCTTGACGCTGGTTTATCACCTACCGATAGAACTTCATACCATGGCAGAACGCCTACAGGCGACACTGGCAGCGGAAGGCTGTGAACTCACAATTATTTTTCATAACGCAAAAAACTGGGACGACACGACCCTACAGGCACACGCAGACCTCATGATGGGCGACAGATTAATTGGCGAAGCACCGGAATATACTCTGGAGCAATGGCTGCGCTGCGATCCGCTGTGGCCACATGTTTTCGACGCTCCAGCATACGCACATCTACAATCGACACTGGATGCCGTGCAAATAATGCCTGATGAAGAAAACCGATTTAATGCCCTGAAAGCGGTTTTTAGCCAGTTAATGACAGATGCGACGCTGACGCCGCTGTTCAACTATCACTATCGCATTAGTGCCCCTCCCGGCGTGAACGGTGTGCGACTGACACCGCGCGGCTGGTTTGAATTTACCGAAGCCTGGCTTCCCGCGCCATCGCAATGA", + "dna_sequence_length": 1701, + "functions": [ + "putative ABC transporter periplasmic binding protein" + ], + "id": "CDS_438", + "location": [ + [ + "NC_000913", + 467312, + "-", + 1701 + ] + ], + "md5": "675f0b7199d4537fecd1d673192de085", + "parent_gene": "", + "protein_md5": "691aaa4d560b5b382c886b4b7167d284", + "protein_translation": "MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLQAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ", + "protein_translation_length": 566, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001548" + ], + [ + "gene_synonym", + "ECK0440" + ], + [ + "gene_synonym", + "EcoGene:EG13216" + ], + [ + "gene_synonym", + "GI:90111136" + ], + [ + "gene_synonym", + "GeneID:945089" + ], + [ + "gene_synonym", + "JW0436" + ], + [ + "gene_synonym", + "NP_414980.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46891" + ], + [ + "gene_synonym", + "b0446" + ], + [ + "gene_synonym", + "cof" + ] + ], + "dna_sequence": "ATGGCTCGTCTGGCAGCATTTGATATGGATGGCACTTTATTGATGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCGACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACGGAACGCGCGTGCATTCTCTGGAAGGTGAACTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACGGTTGGTTTACCGGGAAAGAGATCCCTGCGTTGTTGCAGGCATTTGTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACTCGGCAGCGTCACCAAGATCTGCTTCTGTGGCGATCACGACGATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGAAGTGCTGCCGGTGGGCTGCAATAAAGGCGCTGCATTGACGGTGCTGACCCAACATTTAGGTTTATCGTTGCGCGATTGCATGGCCTTTGGTGATGCGATGAACGATCGCGAAATGTTAGTCAGCGTCGGTAGCGGATTTATTATGGGCAATGCGATGCCGCAACTGCGCGCGGAGCTCCCGCATTTACCGGTGATTGGACATTGCCGAAATCAGGCTGTCTCTCACTATTTGACGCACTGGCTGGACTATCCACATCTACCTTATTCCCCCGAATAA", + "dna_sequence_length": 819, + "functions": [ + "thiamine pyrimidine pyrophosphate hydrolase", + "HMP-PP phosphatase" + ], + "id": "CDS_439", + "location": [ + [ + "NC_000913", + 467412, + "+", + 819 + ] + ], + "md5": "3ff9f46d5fd8c08a95ad5609e7daba59", + "parent_gene": "", + "protein_md5": "6a868667be2f869d1f5a3adeb0eca635", + "protein_translation": "MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001553" + ], + [ + "gene_synonym", + "ECK0441" + ], + [ + "gene_synonym", + "EcoGene:EG13218" + ], + [ + "gene_synonym", + "GI:90111137" + ], + [ + "gene_synonym", + "GeneID:945091" + ], + [ + "gene_synonym", + "JW0437" + ], + [ + "gene_synonym", + "NP_414981.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACJ5" + ], + [ + "gene_synonym", + "b0447" + ], + [ + "gene_synonym", + "grp?" + ], + [ + "gene_synonym", + "ybaO" + ] + ], + "dna_sequence": "ATGTTAGATAAAATTGACCGTAAGCTGCTGGCCTTACTGCAGCAGGATTGCACCCTCTCTTTGCAGGCACTGGCTGAAGCCGTTAATCTGACAACCACCCCTTGCTGGAAGCGCCTGAAACGGCTGGAGGACGACGGTATCCTTATCGGCAAAGTCGCCCTGCTGGATCCGGAAAAAATAGGCCTCGGCCTGACCGCTTTTGTGCTGATAAAAACGCAACATCACAGCAGCGAATGGTATTGCCGCTTTGTCACGGTGGTTACCGAAATGCCAGAAGTGCTGGGGTTCTGGCGCATGGCTGGTGAATACGATTATCTGATGCGCGTCCAGGTTGCCGACATGAAACGCTACGACGAGTTTTATAAGCGTCTGGTAAACAGCGTGCCGGGGCTGTCGGACGTCACTTCCAGCTTCGCGATGGAACAGATTAAATACACCACTTCTTTACCCATCGAATAA", + "dna_sequence_length": 459, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_440", + "location": [ + [ + "NC_000913", + 468383, + "+", + 459 + ] + ], + "md5": "e3f41d39073b7b09eef89480e17e144d", + "parent_gene": "", + "protein_md5": "fec718c80e00354a5a4a825b5ad0a9e8", + "protein_translation": "MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001555" + ], + [ + "gene_synonym", + "ECK0442" + ], + [ + "gene_synonym", + "EcoGene:EG11622" + ], + [ + "gene_synonym", + "GI:16128433" + ], + [ + "gene_synonym", + "GeneID:945092" + ], + [ + "gene_synonym", + "JW0438" + ], + [ + "gene_synonym", + "NP_414982.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77265" + ], + [ + "gene_synonym", + "b0448" + ], + [ + "gene_synonym", + "mdl" + ], + [ + "gene_synonym", + "mdlA" + ] + ], + "dna_sequence": "GTGCGATTATTTGCTCAATTAAGCTGGTATTTCCGTCGGGAATGGCGTCGCTATCTCGGGGCTGTCGCCTTGCTTGTCATTATCGCGATGCTGCAACTGGTTCCGCCAAAAGTGGTTGGTATTGTTGTCGATGGCGTGACAGAACAACACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATCTCCTGCGTTACGTCTGGCGGGTATTGCTGTTTGGTGCGTCTTATCAACTGGCTGTTGAACTGCGTGAAGATTATTACCGTCAGCTAAGCCGGCAGCATCCTGAGTTTTACCTGCGTCATCGCACCGGTGACCTCATGGCTCGTGCGACCAATGACGTCGATCGCGTCGTGTTTGCCGCCGGAGAAGGGGTGCTGACGCTGGTGGATTCACTGGTGATGGGCTGCGCTGTGTTGATTATGATGTCTACGCAAATTAGCTGGCAGTTGACCTTATTTTCCCTGTTGCCGATGCCAGTGATGGCGATCATGATTAAGCGCAACGGCGATGCTTTGCATGAACGCTTTAAGCTGGCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCAAAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCAGCTCACCAGTTTTATGATGTATTTAGGTCTGATGATTTGGCCAATGCTGGCGCTGGCATGGATGTTTAACATTGTGGAACGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAGCGCGGTGTGATGCTTTCCGGCGGGCAAAAACAGCGTATCTCCATTGCTCGTGCGTTATTAGTCAACGCGGAAATCCTCATCCTTGATGATGCGCTTTCGGCGGTGGACGGACGCACTGAGCACCAGATCCTGCATAACCTGCGTCAGTGGGGGCAGGGAAGAACGGTAATCATCAGTGCCCATCGCCTTTCTGCACTGACGGAAGCCAGTGAAATTATTGTGATGCAGCACGGACATATCGCCCAGCGTGGCAATCATGATGTGCTGGCACAACAAAGCGGCTGGTATCGCGATATGTATCGCTATCAACAACTGGAGGCGGCGCTCGACGACGCTCCGGAAAATCGCGAGGAGGCCGTCGATGCGTAG", + "dna_sequence_length": 1773, + "functions": [ + "putative multidrug ABC transporter ATPase" + ], + "id": "CDS_441", + "location": [ + [ + "NC_000913", + 468871, + "+", + 1773 + ] + ], + "md5": "b9425113c78d470203fabb3bb1b8912f", + "parent_gene": "", + "protein_md5": "2273f6c681d6759f843d2686018bc3da", + "protein_translation": "MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFSLLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDVLAQQSGWYRDMYRYQQLEAALDDAPENREEAVDA", + "protein_translation_length": 590, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001557" + ], + [ + "gene_synonym", + "ECK0443" + ], + [ + "gene_synonym", + "EcoGene:EG14374" + ], + [ + "gene_synonym", + "GI:16128434" + ], + [ + "gene_synonym", + "GeneID:945088" + ], + [ + "gene_synonym", + "JW5061" + ], + [ + "gene_synonym", + "NP_414983.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG5" + ], + [ + "gene_synonym", + "b0449" + ], + [ + "gene_synonym", + "mdl" + ], + [ + "gene_synonym", + "mdlB" + ] + ], + "dna_sequence": "ATGCGTAGTTTTAGCCAACTGTGGCCGACTCTCAAGCGCCTGTTAGCGTACGGTTCGCCGTGGCGTAAACCGCTGGGGATTGCGGTCCTGATGATGTGGGTTGCGGCGGCGGCAGAAGTCAGTGGGCCGCTGCTTATCAGCTATTTTATCGACAATATGGTAGCGAAAAATAACCTGCCGTTGAAAGTGGTTGCAGGGCTGGCTGCGGCGTATGTTGGGCTGCAACTGTTTGCCGCCGGGCTACATTACGCGCAGTCGCTGCTGTTTAATCGGGCGGCAGTAGGCGTAGTGCAACAGTTGCGTACCGACGTGATGGATGCTGCGTTACGCCAGCCATTAAGCGAGTTTGATACCCAACCCGTCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAATCATCAATGGCATGAGCGTTATCCAGCAGTTTCGTCAGCAGGCGCGATTTGGCGAACGTATGGGGGAGGCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGCGTGCTGTATGCGTTTATCAGCTATCTTGGGCGACTTAACGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATGGACGGACCGCGCCAGCAATATGGCAATGATGATCGCCCGTTACAGAGTGGCACCATCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGCCAGTTTATTGATGGGCTATTACCCGCTAACGGAAGGTGAGATTCGCCTTGATGGTCGTCCATTAAGTTCGCTAAGTCACAGCGCGCTGCGCCAGGGCGTGGCAATGGTGCAGCAAGATCCGGTGGTGCTGGCGGATACCTTCCTCGCCAACGTGACGCTGGGGCGGGATATCTCCGAAGAACGCGTCTGGCAGGCGCTGGAAACCGTGCAACTGGCGGAGCTGGCGCGTAGCATGAGCGACGGTATTTACACGCCGCTGGGCGAGCAGGGGAATAATCTCTCAGTTGGGCAAAAGCAACTGCTGGCACTGGCGCGCGTGCTGGTCGAGACGCCGCAAATCCTGATCCTTGATGAGGCAACCGCCAGCATTGACTCCGGTACTGAACAGGCGATTCAACATGCTCTGGCGGCGGTGCGTGAACATACCACGCTGGTAGTGATTGCTCACCGCTTATCGACCATTGTTGATGCCGACACCATTCTGGTGCTTCATCGTGGGCAAGCCGTGGAGCAGGGCACTCACCAGCAACTGCTGGCGGCCCAGGGACGCTACTGGCAGATGTATCAACTGCAACTTGCGGGCGAAGAGCTGGCAGCCAGCGTGCGTGAAGAGGAATCATTGAGCGCCTGA", + "dna_sequence_length": 1782, + "functions": [ + "putative multidrug ABC transporter ATPase" + ], + "id": "CDS_442", + "location": [ + [ + "NC_000913", + 470636, + "+", + 1782 + ] + ], + "md5": "2df822bd1f4702d47406cd56daf108b0", + "parent_gene": "", + "protein_md5": "990c3944a53f9d4e20318df8fc0ec1ff", + "protein_translation": "MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLPLKVVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDRPLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELAASVREEESLSA", + "protein_translation_length": 593, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001562" + ], + [ + "gene_synonym", + "ECK0444" + ], + [ + "gene_synonym", + "EcoGene:EG12191" + ], + [ + "gene_synonym", + "GI:16128435" + ], + [ + "gene_synonym", + "GeneID:945087" + ], + [ + "gene_synonym", + "JW0440" + ], + [ + "gene_synonym", + "NP_414984.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC55" + ], + [ + "gene_synonym", + "b0450" + ], + [ + "gene_synonym", + "glnK" + ], + [ + "gene_synonym", + "ybaI" + ] + ], + "dna_sequence": "ATGAAGCTGGTGACCGTGATAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCATTGGTATTCAGGGCCTGACCGTCACCGAAGTGAAAGGTTTCGGGCGTCAGAAAGGGCATGCCGAGCTGTACCGGGGGGCGGAATACAGCGTCAATTTCCTGCCAAAAGTAAAAATTGATGTGGCGATTGCTGATGACCAACTCGATGAAGTGATCGATATCGTCAGTAAGGCGGCTTACACCGGAAAAATTGGCGACGGCAAAATCTTCGTCGCTGAATTGCAACGCGTCATTCGTATTCGTACCGGCGAAGCCGACGAAGCGGCGCTGTAA", + "dna_sequence_length": 339, + "functions": [ + "nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB" + ], + "id": "CDS_443", + "location": [ + [ + "NC_000913", + 472598, + "+", + 339 + ] + ], + "md5": "74b1efa6c441ec61b118293654520720", + "parent_gene": "", + "protein_md5": "2c10f8c51446d7159794c9595ed25026", + "protein_translation": "MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001564" + ], + [ + "gene_synonym", + "ECK0445" + ], + [ + "gene_synonym", + "EcoGene:EG11821" + ], + [ + "gene_synonym", + "GI:16128436" + ], + [ + "gene_synonym", + "GeneID:945084" + ], + [ + "gene_synonym", + "JW0441" + ], + [ + "gene_synonym", + "NP_414985.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69681" + ], + [ + "gene_synonym", + "amtB" + ], + [ + "gene_synonym", + "b0451" + ], + [ + "gene_synonym", + "ybaG" + ] + ], + "dna_sequence": "ATGAAGATAGCGACGATAAAAACTGGGCTTGCTTCACTGGCGATGCTTCCGGGACTGGTAATGGCTGCACCTGCGGTGGCCGATAAAGCCGACAATGCGTTTATGATGATTTGTACTGCGCTGGTGCTGTTTATGACTATTCCGGGGATTGCCCTGTTTTACGGTGGGTTGATTCGCGGCAAAAACGTGCTGTCGATGCTGACGCAGGTGACGGTGACATTTGCACTGGTCTGTATTCTCTGGGTGGTTTACGGTTACTCGCTGGCGTTTGGTGAGGGCAACAACTTCTTCGGCAACATTAACTGGTTGATGCTGAAAAACATCGAACTGACGGCGGTGATGGGCAGCATTTATCAGTATATCCACGTGGCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGCTTCTCAGCTGTGTTGATTTTCGTGGTGGTATGGCTGACGCTCTCTTACATTCCGATTGCGCATATGGTGTGGGGCGGTGGTTTGCTGGCTTCTCACGGTGCGCTGGATTTCGCGGGTGGCACCGTGGTGCACATTAACGCCGCAATCGCCGGTCTGGTGGGCGCGTATCTGATAGGAAAACGCGTGGGCTTCGGTAAAGAGGCGTTTAAACCGCACAACCTGCCGATGGTCTTCACCGGGACTGCCATTCTCTATATCGGTTGGTTTGGCTTTAACGCCGGGTCAGCGGGCACGGCGAATGAAATCGCGGCACTGGCATTTGTGAATACTGTGGTCGCAACGGCGGCGGCAATTCTTGGCTGGATCTTCGGTGAATGGGCGCTGCGTGGTAAGCCTTCACTGCTGGGGGCGTGTTCTGGCGCGATTGCCGGTCTGGTCGGCGTGACGCCAGCCTGCGGCTACATTGGGGTTGGCGGCGCGTTGATTATCGGCGTGGTAGCTGGTCTGGCGGGCTTGTGGGGCGTTACCATGCTCAAACGCTTGCTGCGGGTGGATGATCCCTGCGATGTCTTCGGTGTGCACGGCGTTTGTGGCATTGTCGGCTGTATCATGACCGGGATTTTTGCCGCCAGCTCGCTGGGCGGCGTGGGCTTCGCTGAAGGTGTGACGATGGGCCATCAGTTGCTGGTACAGCTGGAAAGCATCGCCATTACGATCGTCTGGTCCGGTGTTGTGGCATTTATCGGCTACAAATTGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAA", + "dna_sequence_length": 1287, + "functions": [ + "ammonium transporter" + ], + "id": "CDS_444", + "location": [ + [ + "NC_000913", + 472966, + "+", + 1287 + ] + ], + "md5": "8bbdc44f807b9ede95513415d5f1f18f", + "parent_gene": "", + "protein_md5": "7425101048cecf93418f55c3037cb6be", + "protein_translation": "MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNSHGENAYNA", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001566" + ], + [ + "gene_synonym", + "ECK0446" + ], + [ + "gene_synonym", + "EcoGene:EG10995" + ], + [ + "gene_synonym", + "GI:16128437" + ], + [ + "gene_synonym", + "GeneID:945074" + ], + [ + "gene_synonym", + "JW0442" + ], + [ + "gene_synonym", + "NP_414986.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGG2" + ], + [ + "gene_synonym", + "b0452" + ], + [ + "gene_synonym", + "tesB" + ] + ], + "dna_sequence": "ATGAGTCAGGCGCTAAAAAATTTACTGACATTGTTAAATCTGGAAAAAATTGAGGAAGGACTCTTTCGCGGCCAGAGTGAAGATTTAGGTTTACGCCAGGTGTTTGGCGGCCAGGTCGTGGGTCAGGCCTTGTATGCTGCAAAAGAGACCGTCCCTGAAGAGCGGCTGGTACATTCGTTTCACAGCTACTTTCTTCGCCCTGGCGATAGTAAGAAGCCGATTATTTATGATGTCGAAACGCTGCGTGACGGTAACAGCTTCAGCGCCCGCCGGGTTGCTGCTATTCAAAACGGCAAACCGATTTTTTATATGACTGCCTCTTTCCAGGCACCAGAAGCGGGTTTCGAACATCAAAAAACAATGCCGTCCGCGCCAGCGCCTGATGGCCTCCCTTCGGAAACGCAAATCGCCCAATCGCTGGCGCACCTGCTGCCGCCAGTGCTGAAAGATAAATTCATCTGCGATCGTCCGCTGGAAGTCCGTCCGGTGGAGTTTCATAACCCACTGAAAGGTCACGTCGCAGAACCACATCGTCAGGTGTGGATCCGCGCAAATGGTAGCGTGCCGGATGACCTGCGCGTTCATCAGTATCTGCTCGGTTACGCTTCTGATCTTAACTTCCTGCCGGTAGCTCTACAGCCGCACGGCATCGGTTTTCTCGAACCGGGGATTCAGATTGCCACCATTGACCATTCCATGTGGTTCCATCGCCCGTTTAATTTGAATGAATGGCTGCTGTATAGCGTGGAGAGCACCTCGGCGTCCAGCGCACGTGGCTTTGTGCGCGGTGAGTTTTATACCCAAGACGGCGTACTGGTTGCCTCGACCGTTCAGGAAGGGGTGATGCGTAATCACAATTAA", + "dna_sequence_length": 861, + "functions": [ + "acyl-CoA thioesterase 2" + ], + "id": "CDS_445", + "location": [ + [ + "NC_000913", + 475161, + "-", + 861 + ] + ], + "md5": "5aebfc089057964f13401daa387d9f19", + "parent_gene": "", + "protein_md5": "db48d4e8f270845af318b767af7d6024", + "protein_translation": "MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001574" + ], + [ + "gene_synonym", + "ECK0447" + ], + [ + "gene_synonym", + "EcoGene:EG13253" + ], + [ + "gene_synonym", + "GI:49176025" + ], + [ + "gene_synonym", + "GeneID:945070" + ], + [ + "gene_synonym", + "JW0443" + ], + [ + "gene_synonym", + "NP_414987.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77717" + ], + [ + "gene_synonym", + "b0453" + ], + [ + "gene_synonym", + "ybaY" + ] + ], + "dna_sequence": "ATGAAACTCGTGCACATGGCCAGTGGTTTAGCGGTTGCGATTGCGTTGGCGGCTTGCGCAGATAAAAGCGCGGATATTCAGACGCCAGCACCGGCTGCAAATACGTCTATTTCAGCAACACAACAACCAGCTATCCAGCAACCGAATGTCTCCGGTACCGTCTGGATCCGTCAGAAAGTCGCACTGCCGCCTGATGCTGTGCTGACCGTGACACTTTCTGACGCGTCGTTAGCCGATGCACCGTCAAAAGTGCTGGCGCAGAAAGCGGTGCGTACTGAAGGTAAACAGTCACCATTCAGCTTTGTTCTGTCATTTAACCCGGCAGATGTTCAGCCGAACGCGCGTATTCTGTTGAGTGCGGCGATTACCGTGAATGACAAACTGGTATTTATCACCGATACCGTTCAGCCGGTGATCAACCAGGGCGGAACTAAAGCCGACCTGACATTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAA", + "dna_sequence_length": 573, + "functions": [ + "outer membrane lipoprotein" + ], + "id": "CDS_446", + "location": [ + [ + "NC_000913", + 475379, + "+", + 573 + ] + ], + "md5": "793c974c024ebc2cb368b7fa08451877", + "parent_gene": "", + "protein_md5": "de43ac1b712f464cf7d68c078339839d", + "protein_translation": "MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNPSSAVPAPTQY", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001576" + ], + [ + "gene_synonym", + "ECK0448" + ], + [ + "gene_synonym", + "EcoGene:EG13254" + ], + [ + "gene_synonym", + "GI:16128439" + ], + [ + "gene_synonym", + "GeneID:945094" + ], + [ + "gene_synonym", + "JW0444" + ], + [ + "gene_synonym", + "NP_414988.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP2" + ], + [ + "gene_synonym", + "b0454" + ], + [ + "gene_synonym", + "ybaZ" + ] + ], + "dna_sequence": "ATGCTGGTTTCTTGCGCAATGCGACTTCACTCGGGCGTTTTTCCAGATTATGCTGAAAAATTACCTCAGGAAGAAAAGATGGAAAAAGAAGATTCATTTCCCCAACGCGTCTGGCAAATCGTCGCCGCTATTCCCGAAGGCTATGTCACCACTTACGGTGATGTGGCGAAACTGGCGGGATCGCCCCGCGCCGCGCGCCAGGTGGGCGGTGTGTTAAAGCGTCTCCCTGAAGGCAGCACCTTACCCTGGCACCGGGTGGTTAATCGCCACGGCACAATTTCGCTAACCGGACCGGATTTACAGCGTCAGCGACAGGCATTACTGGCAGAAGGTGTGATGGTATCGGGAAGCGGGCAAATCGACTTGCAGCGTTATCGCTGGAACTACTAA", + "dna_sequence_length": 390, + "functions": [ + "excision repair protein, alkyltransferase-like protein ATL" + ], + "id": "CDS_447", + "location": [ + [ + "NC_000913", + 476371, + "-", + 390 + ] + ], + "md5": "a61812a1f112568929e156c0419cc882", + "parent_gene": "", + "protein_md5": "6087b77aea927d65738bb3396fb39f38", + "protein_translation": "MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001582" + ], + [ + "gene_synonym", + "ECK0450" + ], + [ + "gene_synonym", + "EcoGene:EG11099" + ], + [ + "gene_synonym", + "GI:16128440" + ], + [ + "gene_synonym", + "GeneID:948863" + ], + [ + "gene_synonym", + "JW0445" + ], + [ + "gene_synonym", + "NP_414989.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAQ6" + ], + [ + "gene_synonym", + "b0456" + ], + [ + "gene_synonym", + "ybaA" + ] + ], + "dna_sequence": "ATGAAGTATGTTGATGGTTTTGTGGTTGCCGTTCCTGCCGATAAAAAGGATGCCTATCGGGAAATGGCCGCTAAGGCTGCGCCATTGTTTAAAGAGTTTGGCGCGCTTCGTATTGTCGAATGCTGGGCCAGCGATGTACCGGATGGCAAAGTGACCGATTTTCGTATGGCGGTGAAAGCGGAAGAGAATGAAGAGGTTGTCTTTAGCTGGATTGAATACCCTTCAAAAGAGGTCCGCGACGCTGCTAATCAAAAGATGATGTCGGACCCACGGATGAAAGAGTTCGGCGAGTCCATGCCGTTTGACGGCAAGCGAATGATCTATGGCGGATTCGAGTCAATCATCGACGAATAG", + "dna_sequence_length": 354, + "functions": [ + "DUF1428 family protein" + ], + "id": "CDS_448", + "location": [ + [ + "NC_000913", + 476672, + "+", + 354 + ] + ], + "md5": "e2162aa0658bb1d5c12131312d1e5d45", + "parent_gene": "", + "protein_md5": "ddf54e2a1876bd2de0b1097122664d99", + "protein_translation": "MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001584" + ], + [ + "gene_synonym", + "ECK0451" + ], + [ + "gene_synonym", + "EcoGene:EG14237" + ], + [ + "gene_synonym", + "GI:90111138" + ], + [ + "gene_synonym", + "GeneID:948951" + ], + [ + "gene_synonym", + "JW5062" + ], + [ + "gene_synonym", + "NP_414990.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77473" + ], + [ + "gene_synonym", + "b0457" + ], + [ + "gene_synonym", + "ylaB" + ] + ], + "dna_sequence": "GTGAGAACACGACATCTGGTCGGCCTTATTTCGGGAGTACTGATTCTTTCAGTATTGCTGCCTGTCGGCTTAAGCATCTGGCTGGCCCATCAGCAGGTAGAAACATCGTTTATTGAAGAGCTGGATACCTATTCCTCCCGCGTCGCTATTCGAGCCAATAAGGTGGCGACACAAGGGAAAGATGCGCTGCAGGAGCTGGAAAGATGGCAAGGCGCTGCCTGTAGCGAAGCCCATCTCATGGAAATGCGTCGGGTATCTTACAGTTATCGCTATATTCAGGAAGTGGCTTATATCGATAACAACGTTCCCCAGTGTTCGTCTCTGGAGCATGAAAGTCCGCCCGATACCTTCCCCGAGCCAGGTAAAATTTCGAAAGATGGTTATCGTGTCTGGTTAACATCGCATAACGATTTAGGCATTATCCGTTACATGGTCGCCATGGGAACGGCACATTATGTCGTCATGATCGACCCCGCTTCCTTTATTGATGTCATTCCCTATAGCTCATGGCAAATTGATGCCGCCATTATTGGCAATGCCCATAACGTTGTCATAACCAGCAGCGATGAAATTGCTCAGGGAATTATTACCAGGCTACAAAAAACACCCGGTGAGCATATCGAAAATAATGGAATCATTTACGATATCCTGCCCTTACCGGAGATGAATATTTCGATCATCACATGGGCTTCAACGAAAATGTTGCAGAAAGGCTGGCATCGGCAAGTCTTTATTTGGTTACCGCTCGGGTTGGTGATTGGCCTGCTGGCAGCGATGTTTGTGCTGCGTATTTTGCGCCGTATTCAGTCACCGCATCATCGGCTGCAGGATGCTATCGAAAATCGTGATATTTGCGTGCACTATCAGCCGATTGTCTCCTTAGCCAATGGCAAAATTGTCGGTGCTGAGGCACTGGCGCGCTGGCCGCAGACAGACGGTAGTTGGTTGTCACCAGATAGTTTTATTCCGCTGGCACAGCAAACGGGCCTTTCTGAGCCATTGACGCTACTGATTATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGCGTCAGCATCCACAGCAGCATATTTCGATCAATCTTGAATCCCCCGTGCTCACCTCGGAAAAAATCCCGCAATTGCTGCGTGACATGATCAATCACTATCAGGTTAATCCCAGACAGATCGCGCTTGAACTCACTGAACGCGAGTTTGCCGATCCGAAAACCAGCGCCCCGATAATTTCTCGCTACCGGGAGGCGGGCCATGAAATTTATCTTGATGATTTTGGTACGGGGTATTCAAGTTTAAGTTATTTACAGGATCTGGATGTCGACATTCTGAAGATCGATAAATCTTTCGTTGATGCGCTGGAATATAAAAATGTCACGCCGCATATCATCGAAATGGCAAAAACACTGAAACTGAAAATGGTAGCGGAGGGAATCGAAACCAGTAAACAAGAAGAGTGGTTACGCCAGCATGGCGTGCACTACGGTCAGGGCTGGCTCTACAGCAAGGCATTACCGAAAGAAGATTTCTTACGCTGGGCCGAGCAACATTTGTGA", + "dna_sequence_length": 1551, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_449", + "location": [ + [ + "NC_000913", + 478617, + "-", + 1551 + ] + ], + "md5": "ad0c478c0cacede802aef62e5074df85", + "parent_gene": "", + "protein_md5": "fcfaef53e46e2a174eefafe09d25e0a1", + "protein_translation": "MRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVAYIDNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPLPEMNISIITWASTKMLQKGWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHISINLESPVLTSEKIPQLLRDMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL", + "protein_translation_length": 516, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001587" + ], + [ + "gene_synonym", + "ECK0452" + ], + [ + "gene_synonym", + "EcoGene:EG14238" + ], + [ + "gene_synonym", + "GI:90111139" + ], + [ + "gene_synonym", + "GeneID:948876" + ], + [ + "gene_synonym", + "JW5063" + ], + [ + "gene_synonym", + "NP_414991.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAS0" + ], + [ + "gene_synonym", + "b0458" + ], + [ + "gene_synonym", + "ylaC" + ] + ], + "dna_sequence": "ATGACCGAAATACAACGCCTGCTGACCGAAACGATTGAGTCTCTGAATACCCGCGAAAAACGCGACAACAAACCCCGCTTTAGTATCAGTTTTATCCGTAAACATCCGGGGCTGTTTATCGGTATGTACGTTGCTTTTTTTGCCACCCTGGCGGTGATGTTGCAGTCCGAAACGCTGTCAGGCTCTGTCTGGCTACTGGTTGTATTATTTATCCTGCTTAATGGTTTCTTCTTTTTCGATGTCTACCCACGCTACCGCTATGAAGATATCGACGTGCTGGATTTCCGCGTTTGCTATAACGGCGAATGGTACAACACGCGCTTTGTACCTGCCGCGCTGGTTGAAGCCATCTTGAACTCTCCGCGTGTCGCGGATGTTCATAAGGAACAACTGCAAAAAATGATCGTCCGTAAAGGTGAACTGTCTTTTTACGATATTTTTACCCTCGCTCGCGCCGAATCAACATCTTAA", + "dna_sequence_length": 471, + "functions": [ + "DUF1449 family inner membrane protein" + ], + "id": "CDS_450", + "location": [ + [ + "NC_000913", + 479251, + "-", + 471 + ] + ], + "md5": "6a2c776e21525041c55020d6855869fd", + "parent_gene": "", + "protein_md5": "8c0fc28afdc8cc4f0ff842ba48eac564", + "protein_translation": "MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYVAFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001591" + ], + [ + "gene_synonym", + "ECK0453" + ], + [ + "gene_synonym", + "EcoGene:EG14239" + ], + [ + "gene_synonym", + "GI:16128443" + ], + [ + "gene_synonym", + "GeneID:945096" + ], + [ + "gene_synonym", + "JW0448" + ], + [ + "gene_synonym", + "NP_414992.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77791" + ], + [ + "gene_synonym", + "b0459" + ], + [ + "gene_synonym", + "maa" + ], + [ + "gene_synonym", + "ylaD" + ] + ], + "dna_sequence": "ATGAGCACAGAAAAAGAAAAGATGATTGCTGGTGAGTTGTATCGCTCGGCAGATGAGACGTTATCTCGCGATCGCCTGCGCGCTCGTCAGCTTATTCACCGATACAATCATTCCCTGGCGGAAGAGCACACATTACGCCAGCAAATTCTCGCTGATCTATTCGGTCAGGTGACAGAGGCTTATATTGAGCCAACGTTTCGCTGTGACTATGGCTATAACATTTTTCTCGGTAATAATTTTTTCGCCAACTTCGATTGCGTGATGCTTGATGTCTGCCCTATTCGCATCGGTGATAACTGTATGTTGGCACCAGGCGTTCATATCTACACGGCAACACATCCCATCGACCCTGTAGCACGTAATAGCGGTGCTGAACTGGGGAAACCCGTCACCATCGGTAATAACGTCTGGATTGGCGGACGCGCGGTCATTAACCCTGGTGTGACCATTGGTGATAACGTCGTGGTAGCCTCAGGTGCAGTTGTCACAAAAGATGTCCCGGACAACGTTGTCGTGGGCGGTAATCCAGCCAGAATAATTAAAAAATTGTAA", + "dna_sequence_length": 552, + "functions": [ + "maltose O-acetyltransferase" + ], + "id": "CDS_451", + "location": [ + [ + "NC_000913", + 479918, + "-", + 552 + ] + ], + "md5": "5e6e7322eb46f9bb12d027117adf286d", + "parent_gene": "", + "protein_md5": "44e440bb09de08f4df2a54e54e6ed7f1", + "protein_translation": "MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001594" + ], + [ + "gene_synonym", + "ECK0454" + ], + [ + "gene_synonym", + "EcoGene:EG10439" + ], + [ + "gene_synonym", + "GI:16128444" + ], + [ + "gene_synonym", + "GeneID:945098" + ], + [ + "gene_synonym", + "JW0449" + ], + [ + "gene_synonym", + "NP_414993.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE3" + ], + [ + "gene_synonym", + "b0460" + ], + [ + "gene_synonym", + "hha" + ] + ], + "dna_sequence": "ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGTGTTATCGAGAAAAATAAATACGAATTATCAGATAATGAACTGGCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAATTGACCATGAATAAACTGTACGACAAGATCCCTTCCTCAGTATGGAAATTTATTCGCTAA", + "dna_sequence_length": 219, + "functions": [ + "modulator of gene expression, with H-NS" + ], + "id": "CDS_452", + "location": [ + [ + "NC_000913", + 480308, + "-", + 219 + ] + ], + "md5": "8fe3797e6376aaf4864bc2420225414a", + "parent_gene": "", + "protein_md5": "12c7241ea3ff19fca3246f734db77c39", + "protein_translation": "MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001596" + ], + [ + "gene_synonym", + "ECK0455" + ], + [ + "gene_synonym", + "EcoGene:EG12429" + ], + [ + "gene_synonym", + "GI:16128445" + ], + [ + "gene_synonym", + "GeneID:945106" + ], + [ + "gene_synonym", + "JW0450" + ], + [ + "gene_synonym", + "NP_414994.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR0" + ], + [ + "gene_synonym", + "b0461" + ], + [ + "gene_synonym", + "tomB" + ], + [ + "gene_synonym", + "ybaJ" + ] + ], + "dna_sequence": "ATGGATGAATACTCACCCAAAAGACATGATATCGCACAGCTTAAGTTTCTCTGTGAAACCCTGTATCATGACTGCCTTGCAAACCTTGAAGAAAGCAATCATGGCTGGGTAAACGACCCAACCTCGGCGATCAACCTCCAGTTGAATGAACTGATTGAGCATATTGCGACCTTCGCACTTAATTACAAAATTAAGTATAATGAAGACAATAAGCTCATTGAGCAGATCGACGAATATCTGGATGACACCTTTATGTTGTTCAGTAGTTATGGTATTAATATGCAGGATCTTCAGAAATGGCGGAAGTCAGGTAATCGACTATTCCGTTGTTTTGTCAATGCGACGAAAGAGAATCCTGCGAGTTTATCTTGTTAG", + "dna_sequence_length": 375, + "functions": [ + "Hha toxicity attenuator", + "conjugation-related protein" + ], + "id": "CDS_453", + "location": [ + [ + "NC_000913", + 480708, + "-", + 375 + ] + ], + "md5": "4c1bea8d80bb2c591f27a0db7e2a1d12", + "parent_gene": "", + "protein_md5": "59f4d82cd10395502e6959ccb0935bc9", + "protein_translation": "MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPASLSC", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001601" + ], + [ + "gene_synonym", + "ECK0456" + ], + [ + "gene_synonym", + "EcoGene:EG11704" + ], + [ + "gene_synonym", + "GI:16128446" + ], + [ + "gene_synonym", + "GeneID:945108" + ], + [ + "gene_synonym", + "JW0451" + ], + [ + "gene_synonym", + "NP_414995.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31224" + ], + [ + "gene_synonym", + "acrB" + ], + [ + "gene_synonym", + "acrE" + ], + [ + "gene_synonym", + "b0462" + ] + ], + "dna_sequence": "ATGCCTAATTTCTTTATCGATCGCCCGATTTTTGCGTGGGTGATCGCCATTATCATCATGTTGGCAGGGGGGCTGGCGATCCTCAAACTGCCGGTGGCGCAATATCCTACGATTGCACCGCCGGCAGTAACGATCTCCGCCTCCTACCCCGGCGCTGATGCGAAAACAGTGCAGGACACGGTGACACAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTACATGTCCTCTAACAGTGACTCCACGGGTACCGTGCAGATCACCCTGACCTTTGAGTCTGGTACTGATGCGGATATCGCGCAGGTTCAGGTGCAGAACAAACTGCAGCTGGCGATGCCGTTGCTGCCGCAAGAAGTTCAGCAGCAAGGGGTGAGCGTTGAGAAATCATCCAGCAGCTTCCTGATGGTTGTCGGCGTTATCAACACCGATGGCACCATGACGCAGGAGGATATCTCCGACTACGTGGCGGCGAATATGAAAGATGCCATCAGCCGTACGTCGGGCGTGGGTGATGTTCAGTTGTTCGGTTCACAGTACGCGATGCGTATCTGGATGAACCCGAATGAGCTGAACAAATTCCAGCTAACGCCGGTTGATGTCATTACCGCCATCAAAGCGCAGAACGCCCAGGTTGCGGCGGGTCAGCTCGGTGGTACGCCGCCGGTGAAAGGCCAACAGCTTAACGCCTCTATTATTGCTCAGACGCGTCTGACCTCTACTGAAGAGTTCGGCAAAATCCTGCTGAAAGTGAATCAGGATGGTTCCCGCGTGCTGCTGCGTGACGTCGCGAAGATTGAGCTGGGTGGTGAGAACTACGACATCATCGCAGAGTTTAACGGCCAACCGGCTTCCGGTCTGGGGATCAAGCTGGCGACCGGTGCAAACGCGCTGGATACCGCTGCGGCAATCCGTGCTGAACTGGCGAAGATGGAACCGTTCTTCCCGTCGGGTCTGAAAATTGTTTACCCATACGACACCACGCCGTTCGTGAAAATCTCTATTCACGAAGTGGTTAAAACGCTGGTCGAAGCGATCATCCTCGTGTTCCTGGTTATGTATCTGTTCCTGCAGAACTTCCGCGCGACGTTGATTCCGACCATTGCCGTACCGGTGGTATTGCTCGGGACCTTTGCCGTCCTTGCCGCCTTTGGCTTCTCGATAAACACGCTAACAATGTTCGGGATGGTGCTCGCCATCGGCCTGTTGGTGGATGACGCCATCGTTGTGGTAGAAAACGTTGAGCGTGTTATGGCGGAAGAAGGTTTGCCGCCAAAAGAAGCTACCCGTAAGTCGATGGGGCAGATTCAGGGCGCTCTGGTCGGTATCGCGATGGTACTGTCGGCGGTATTCGTACCGATGGCCTTCTTTGGCGGTTCTACTGGTGCTATCTATCGTCAGTTCTCTATTACCATTGTTTCAGCAATGGCGCTGTCGGTACTGGTGGCGTTGATCCTGACTCCAGCTCTTTGTGCCACCATGCTGAAACCGATTGCCAAAGGCGATCACGGGGAAGGTAAAAAAGGCTTCTTCGGCTGGTTTAACCGCATGTTCGAGAAGAGCACGCACCACTACACCGACAGCGTAGGCGGTATTCTGCGCAGTACGGGGCGTTACCTGGTGCTGTATCTGATCATCGTGGTCGGCATGGCCTATCTGTTCGTGCGTCTGCCAAGCTCCTTCTTGCCAGATGAGGACCAGGGCGTGTTTATGACCATGGTTCAGCTGCCAGCAGGTGCAACGCAGGAACGTACACAGAAAGTGCTCAATGAGGTAACGCATTACTATCTGACCAAAGAAAAGAACAACGTTGAGTCGGTGTTCGCCGTTAACGGCTTCGGCTTTGCGGGACGTGGTCAGAATACCGGTATTGCGTTCGTTTCCTTGAAGGACTGGGCCGATCGTCCGGGCGAAGAAAACAAAGTTGAAGCGATTACCATGCGTGCAACACGCGCTTTCTCGCAAATCAAAGATGCGATGGTTTTCGCCTTTAACCTGCCCGCAATCGTGGAACTGGGTACTGCAACCGGCTTTGACTTTGAGCTGATTGACCAGGCTGGCCTTGGTCACGAAAAACTGACTCAGGCGCGTAACCAGTTGCTTGCAGAAGCAGCGAAGCACCCTGATATGTTGACCAGCGTACGTCCAAACGGTCTGGAAGATACCCCGCAGTTTAAGATTGATATCGACCAGGAAAAAGCGCAGGCGCTGGGTGTTTCTATCAACGACATTAACACCACTCTGGGCGCTGCATGGGGCGGCAGCTATGTGAACGACTTTATCGACCGCGGTCGTGTGAAGAAAGTTTATGTCATGTCAGAAGCGAAATACCGTATGCTGCCGGATGATATCGGCGACTGGTATGTTCGTGCTGCTGATGGTCAGATGGTGCCATTCTCGGCGTTCTCCTCTTCTCGTTGGGAGTACGGTTCGCCGCGTCTGGAACGTTACAACGGCCTGCCATCCATGGAAATCTTAGGCCAGGCGGCACCGGGTAAAAGTACCGGTGAAGCAATGGAGCTGATGGAACAACTGGCGAGCAAACTGCCTACCGGTGTTGGCTATGACTGGACGGGGATGTCCTATCAGGAACGTCTCTCCGGCAACCAGGCACCTTCACTGTACGCGATTTCGTTGATTGTCGTGTTCCTGTGTCTGGCGGCGCTGTACGAGAGCTGGTCGATTCCGTTCTCCGTTATGCTGGTCGTTCCGCTGGGGGTTATCGGTGCGTTGCTGGCTGCCACCTTCCGTGGCCTGACCAATGACGTTTACTTCCAGGTAGGCCTGCTCACAACCATTGGGTTGTCGGCGAAGAACGCGATCCTTATCGTCGAATTCGCCAAAGACTTGATGGATAAAGAAGGTAAAGGTCTGATTGAAGCGACGCTTGATGCGGTGCGGATGCGTTTACGTCCGATCCTGATGACCTCGCTGGCGTTTATCCTCGGCGTTATGCCGCTGGTTATCAGTACTGGTGCTGGTTCCGGCGCGCAGAACGCAGTAGGTACCGGTGTAATGGGCGGGATGGTGACCGCAACGGTACTGGCAATCTTCTTCGTTCCGGTATTCTTTGTGGTGGTTCGCCGCCGCTTTAGCCGCAAGAATGAAGATATCGAGCACAGCCATACTGTCGATCATCATTGA", + "dna_sequence_length": 3150, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_454", + "location": [ + [ + "NC_000913", + 484403, + "-", + 3150 + ] + ], + "md5": "9ace3c40185ccf08e92a67c28696da94", + "parent_gene": "", + "protein_md5": "c564a138f040b7ce63fb3db8488183e1", + "protein_translation": "MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRKNEDIEHSHTVDHH", + "protein_translation_length": 1049, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001603" + ], + [ + "gene_synonym", + "ECK0457" + ], + [ + "gene_synonym", + "EcoGene:EG11703" + ], + [ + "gene_synonym", + "GI:16128447" + ], + [ + "gene_synonym", + "GeneID:945112" + ], + [ + "gene_synonym", + "JW0452" + ], + [ + "gene_synonym", + "Mb" + ], + [ + "gene_synonym", + "NP_414996.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE06" + ], + [ + "gene_synonym", + "acrA" + ], + [ + "gene_synonym", + "b0463" + ], + [ + "gene_synonym", + "lir" + ], + [ + "gene_synonym", + "mbl" + ], + [ + "gene_synonym", + "mtcA" + ], + [ + "gene_synonym", + "nbsA" + ], + [ + "gene_synonym", + "sipB" + ] + ], + "dna_sequence": "ATGAACAAAAACAGAGGGTTTACGCCTCTGGCGGTCGTTCTGATGCTCTCAGGCAGCTTAGCCCTAACAGGATGTGACGACAAACAGGCCCAACAAGGTGGCCAGCAGATGCCCGCCGTTGGCGTAGTAACAGTCAAAACTGAACCTCTGCAGATCACAACCGAGCTTCCGGGTCGCACCAGTGCCTACCGGATCGCAGAAGTTCGTCCTCAAGTTAGCGGGATTATCCTGAAGCGTAATTTCAAAGAAGGTAGCGACATCGAAGCAGGTGTCTCTCTCTATCAGATTGATCCTGCGACCTATCAGGCGACATACGACAGTGCGAAAGGTGATCTGGCGAAAGCCCAGGCTGCAGCCAATATCGCGCAATTGACGGTGAATCGTTATCAGAAACTGCTCGGTACTCAGTACATCAGTAAGCAAGAGTACGATCAGGCTCTGGCTGATGCGCAACAGGCGAATGCTGCGGTAACTGCGGCGAAAGCTGCCGTTGAAACTGCGCGGATCAATCTGGCTTACACCAAAGTCACCTCTCCGATTAGCGGTCGCATTGGTAAGTCGAACGTGACGGAAGGCGCATTGGTACAGAACGGTCAGGCGACTGCGCTGGCAACCGTGCAGCAACTTGATCCGATCTACGTTGATGTGACCCAGTCCAGCAACGACTTCCTGCGCCTGAAACAGGAACTGGCGAATGGCACGCTGAAACAAGAGAACGGCAAAGCCAAAGTGTCACTGATCACCAGTGACGGCATTAAGTTCCCGCAGGACGGTACGCTGGAATTCTCTGACGTTACCGTTGATCAGACCACTGGGTCTATCACCCTACGCGCTATCTTCCCGAACCCGGATCACACTCTGCTGCCGGGTATGTTCGTGCGCGCACGTCTGGAAGAAGGGCTTAATCCAAACGCTATTTTAGTCCCGCAACAGGGCGTAACCCGTACGCCGCGTGGCGATGCCACCGTACTGGTAGTTGGCGCGGATGACAAAGTGGAAACCCGTCCGATCGTTGCAAGCCAGGCTATTGGCGATAAGTGGCTGGTGACAGAAGGTCTGAAAGCAGGCGATCGCGTAGTAATAAGTGGGCTGCAGAAAGTGCGTCCTGGTGTCCAGGTAAAAGCACAAGAAGTTACCGCTGATAATAACCAGCAAGCCGCAAGCGGTGCTCAGCCTGAACAGTCCAAGTCTTAA", + "dna_sequence_length": 1194, + "functions": [ + "multidrug efflux system" + ], + "id": "CDS_455", + "location": [ + [ + "NC_000913", + 485619, + "-", + 1194 + ] + ], + "md5": "ba07e9fc4ec4645bc2482924615e9bd1", + "parent_gene": "", + "protein_md5": "52762d32c4bba225824c9d1a93b2d1b3", + "protein_translation": "MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS", + "protein_translation_length": 397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001608" + ], + [ + "gene_synonym", + "ECK0458" + ], + [ + "gene_synonym", + "EcoGene:EG12116" + ], + [ + "gene_synonym", + "GI:16128448" + ], + [ + "gene_synonym", + "GeneID:945516" + ], + [ + "gene_synonym", + "JW0453" + ], + [ + "gene_synonym", + "NP_414997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS9" + ], + [ + "gene_synonym", + "acrR" + ], + [ + "gene_synonym", + "b0464" + ], + [ + "gene_synonym", + "ybaH" + ] + ], + "dna_sequence": "ATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGGTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGCGAATTTGTCGGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACAAACGTTAAAACATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAA", + "dna_sequence_length": 648, + "functions": [ + "transcriptional repressor" + ], + "id": "CDS_456", + "location": [ + [ + "NC_000913", + 485761, + "+", + 648 + ] + ], + "md5": "4830743b562913d95b50c732748e8939", + "parent_gene": "", + "protein_md5": "27e8f13d77a01af2c9129bf6c6703e9a", + "protein_translation": "MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001613" + ], + [ + "gene_synonym", + "ECK0459" + ], + [ + "gene_synonym", + "EcoGene:EG14240" + ], + [ + "gene_synonym", + "GI:16128449" + ], + [ + "gene_synonym", + "GeneID:945132" + ], + [ + "gene_synonym", + "JW0454" + ], + [ + "gene_synonym", + "NP_414998.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77338" + ], + [ + "gene_synonym", + "aefA" + ], + [ + "gene_synonym", + "b0465" + ], + [ + "gene_synonym", + "kefA" + ], + [ + "gene_synonym", + "mscK" + ], + [ + "gene_synonym", + "pnuH" + ] + ], + "dna_sequence": "ATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCTCGATAAAATCGATCGCATAAAAGAAGAGACAGTTCAGCTACGGCAAAAAGTCGCTGAAGCGCCGGAAAAAATGCGCCAGGCGACCGCGGCGTTAACAGCACTTAGCGATGTCGATAACGACGAAGAAACGCGCAAAATTCTGAGCACGCTGTCGTTGCGCCAGCTGGAAACTCGCGTTGCCCAGGCGCTGGACGATTTGCAAAACGCACAAAACGATCTGGCGTCTTATAACAGCCAGCTGGTTTCGTTACAGACGCAGCCCGAACGCGTGCAAAATGCGATGTATAACGCTTCGCAGCAGCTGCAACAAATTCGCAGTCGTCTGGATGGGACTGATGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGACTTTAACCGAAAAAACGGCGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCTGTTGTCTCGTATCCTTTACCAGCAACAACAAACGCTGCCCTCGGCGGATGAACTGGAAAACATGACCAACCGCATCGCGGATTTGCGTCTCGAACAGTTTGAAGTTAACCAGCAGCGTGATGCACTCTTCCAGAGCGATGCGTTCGTCAACAAACTGGAAGAAGGTCACACCAACGAAGTCAACAGCGAAGTTCACGATGCGTTATTGCAAGTGGTTGATATGCGTCGCGAATTGCTGGATCAACTCAACAAACAGTTGGGTAACCAGCTGATGATGGCCATTAACCTGCAAATCAACCAGCAGCAGTTAATGAGTGTGTCGAAAAACCTGAAATCCATCCTGACTCAGCAAATCTTTTGGGTGAACAGTAACCGTCCAATGGACTGGGACTGGATCAAAGCGTTCCCGCAAAGCCTGAAAGATGAATTTAAGTCGATGAAAATCACGGTGAACTGGCAAAAAGCCTGGCCCGCCGTTTTTATCGCTTTCCTCGCTGGTTTGCCGCTGCTGTTGATTGCCGGGCTGATCCACTGGCGTCTGGGCTGGCTGAAAGCGTATCAACAAAAACTGGCTTCCGCTGTGGGTTCCCTGCGTAACGACAGCCAGCTCAACACACCAAAAGCGATCCTTATCGACCTGATCCGTGCGCTGCCGGTGTGCCTGATTATTCTCGCGGTTGGCCTGATTCTGTTGACCATGCAGCTCAACATCAGCGAACTGCTATGGTCGTTCAGCAAAAAACTGGCGATATTCTGGCTGGTGTTTGGCCTGTGCTGGAAGGTACTGGAGAAAAACGGCGTTGCCGTACGTCACTTCGGCATGCCGGAACAGCAGACCAGCCACTGGCGTCGGCAAATTGTCCGCATCAGTCTCGCATTGCTGCCTATCCATTTCTGGTCTGTGGTGGCAGAACTTTCCCCGCTGCATCTGATGGATGATGTGCTGGGGCAAGCGATGATTTTCTTCAACCTGCTGCTGATTGCCTTCCTGGTATGGCCGATGTGCCGCGAAAGCTGGCGTGATAAAGAGTCGCACACCATGCGACTGGTCACCATTACCGTGCTGTCGATAATCCCGATTGCGCTGATGGTGCTGACTGCTACAGGCTACTTCTACACTACGCTGCGTCTGGCAGGACGCTGGATTGAAACCGTTTATCTGGTGATCATCTGGAACCTGCTGTACCAGACGGTACTGCGTGGCTTAAGCGTAGCGGCGCGGCGTATCGCCTGGCGTCGTGCGCTGGCGCGTCGGCAGAATCTGGTGAAAGAGGGCGCAGAAGGTGCTGAACCGCCGGAAGAACCCACCATTGCACTGGAGCAAGTTAACCAGCAGACGCTGCGTATTACCATGTTGCTGATGTTTGCGCTGTTCGGTGTCATGTTCTGGGCAATTTGGTCCGATTTGATCACCGTGTTCAGCTATCTCGACAGCATCACGCTCTGGCATTACAACGGCACTGAAGCTGGCGCTGCGGTGGTGAAAAACGTCACCATGGGCAGTCTGTTGTTTGCGATTATCGCCTCAATGGTGGCCTGGGCGTTGATTCGCAACCTGCCTGGTTTACTGGAAGTGCTGGTGCTCTCGCGACTGAATATGCGCCAGGGCGCGTCGTATGCCATTACTACCATCCTTAACTACATCATTATTGCTGTTGGTGCGATGACGGTGTTCGGATCGCTGGGCGTCTCTTGGGATAAACTCCAGTGGCTGGCCGCAGCATTATCCGTAGGTCTTGGTTTTGGTTTACAAGAAATTTTCGGTAACTTCGTCTCCGGTTTGATCATTCTATTCGAACGTCCGGTGCGTATTGGCGATACGGTAACCATTGGTAGCTTCTCGGGGACGGTAAGTAAGATCCGTATTCGTGCGACAACGATTACCGATTTCGATCGCAAAGAAGTGATCATCCCGAACAAAGCGTTTGTTACCGAGCGTCTGATCAACTGGTCGTTGACTGACACTACTACGCGTCTGGTGATCCGTCTCGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGATCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCTTTAACCAGCTTGAAGTGCATCTGCACAACGAGAAGGGCGATGAGGTGACGGAAGTAAAACGCGACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAA", + "dna_sequence_length": 3363, + "functions": [ + "mechanosensitive channel protein, intermediate conductance, K+ regulated" + ], + "id": "CDS_457", + "location": [ + [ + "NC_000913", + 486536, + "+", + 3363 + ] + ], + "md5": "7a99b7abbad3d9a722182fc439d44d8c", + "parent_gene": "", + "protein_md5": "fc6cf84d6585a3b81e72f45f917c76b3", + "protein_translation": "MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTKADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAFVNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWQKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRESWRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLMFALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG", + "protein_translation_length": 1120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001616" + ], + [ + "gene_synonym", + "ECK0460" + ], + [ + "gene_synonym", + "EcoGene:EG12830" + ], + [ + "gene_synonym", + "GI:16128450" + ], + [ + "gene_synonym", + "GeneID:945144" + ], + [ + "gene_synonym", + "JW0455" + ], + [ + "gene_synonym", + "NP_414999.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45807" + ], + [ + "gene_synonym", + "b0466" + ], + [ + "gene_synonym", + "ybaM" + ] + ], + "dna_sequence": "ATGTCACTGGAAAATGCCCCTGACGATGTCAAACTGGCTGTCGATTTGATTGTGCTGCTGGAGGAAAATCAGATCCCTGCCAGTACCGTGCTGCGCGCGCTGGATATTGTAAAGCGTGATTATGAAAAGAAATTAACGCGCGATGATGAGGCGGAAAAGTGA", + "dna_sequence_length": 162, + "functions": [ + "DUF2496 family protein" + ], + "id": "CDS_458", + "location": [ + [ + "NC_000913", + 490271, + "-", + 162 + ] + ], + "md5": "6891cb80e222837dd0ee13f8ec95c488", + "parent_gene": "", + "protein_md5": "d05cc26d0c280b18e3a5ff1c55bc4a0b", + "protein_translation": "MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTRDDEAEK", + "protein_translation_length": 53, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001619" + ], + [ + "gene_synonym", + "ECK0461" + ], + [ + "gene_synonym", + "EcoGene:EG10765" + ], + [ + "gene_synonym", + "GI:16128451" + ], + [ + "gene_synonym", + "GeneID:945071" + ], + [ + "gene_synonym", + "JW0456" + ], + [ + "gene_synonym", + "NP_415000.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23862" + ], + [ + "gene_synonym", + "b0467" + ], + [ + "gene_synonym", + "priC" + ] + ], + "dna_sequence": "GTGAAAACCGCCCTGCTGCTGGAAAAACTGGAAGGACAGCTCGCTACGCTGCGTCAGCGTTGTGCCCCGGTGTCACAGTTCGCCACGCTAAGTGCTCGTTTCGACAGGCATCTTTTTCAGACTCGTGCGACAACACTACAGGCTTGTCTCGACGAGGCGGGCGATAATCTGGCTGCGCTTCGTCATGCAGTTGAGCAGCAACAGCTGCCGCAAGTGGCCTGGCTGGCGGAACATCTGGCGGCACAACTGGAAGCCATCGCGCGTGAAGCCTCCGCCTGGTCATTGCGCGAGTGGGACAGTGCACCACCGAAAATTGCCCGCTGGCAGCGTAAACGTATTCAGCATCAGGATTTTGAGCGGCGGCTACGTGAGATGGTTGCCGAACGCAGAGCCCGTCTGGCGCGGGTGACCGATCTCGTGGAACAGCAAACGCTGCATCGTGAAGTGGAAGCCTATGAAGCGCGCCTGGCACGCTGCCGCCATGCGCTGGAAAAAATCGAAAACAGGTTAGCGCGTTTAACCCGCTAG", + "dna_sequence_length": 528, + "functions": [ + "primosomal replication protein N''" + ], + "id": "CDS_459", + "location": [ + [ + "NC_000913", + 490812, + "-", + 528 + ] + ], + "md5": "9cdc608b5c9676f034e8dd392d8e979f", + "parent_gene": "", + "protein_md5": "be01d6ed8eed5fe5e734be8a04151295", + "protein_translation": "MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001625" + ], + [ + "gene_synonym", + "ECK0462" + ], + [ + "gene_synonym", + "EcoGene:EG12843" + ], + [ + "gene_synonym", + "GI:16128452" + ], + [ + "gene_synonym", + "GeneID:945558" + ], + [ + "gene_synonym", + "JW0457" + ], + [ + "gene_synonym", + "NP_415001.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR5" + ], + [ + "gene_synonym", + "b0468" + ], + [ + "gene_synonym", + "ybaN" + ] + ], + "dna_sequence": "ATGCAACGAATCATTTTAATCATCATTGGCTGGCTGGCGGTAGTGCTGGGTACGCTGGGCGTGGTATTACCGGTATTACCGACGACGCCGTTTATCCTGCTGGCGGCCTGGTGCTTTGCCCGTTCTTCCCCGCGCTTTCACGCCTGGTTGCTGTACCGCTCATGGTTTGGCAGCTATCTACGTTTCTGGCAGAAACATCATGCGATGCCGCGCGGCGTCAAACCGCGGGCGATTTTGCTTATTTTGCTCACGTTTGCCATTTCTCTGTGGTTCGTCCAGATGCCATGGGTGCGCATCATGTTGCTGGTAATTCTCGCCTGTTTGCTTTTCTATATGTGGCGAATTCCGGTGATTGATGAAAAGCAAGAAAAGCACTGA", + "dna_sequence_length": 378, + "functions": [ + "DUF454 family inner membrane protein" + ], + "id": "CDS_460", + "location": [ + [ + "NC_000913", + 490882, + "+", + 378 + ] + ], + "md5": "75b04ba718c22697f900dd39f5f031e9", + "parent_gene": "", + "protein_md5": "bc54172278741905cd4b02571125d3ec", + "protein_translation": "MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSPRFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLLVILACLLFYMWRIPVIDEKQEKH", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001628" + ], + [ + "gene_synonym", + "ECK0463" + ], + [ + "gene_synonym", + "EcoGene:EG10051" + ], + [ + "gene_synonym", + "GI:16128453" + ], + [ + "gene_synonym", + "GeneID:945113" + ], + [ + "gene_synonym", + "JW0458" + ], + [ + "gene_synonym", + "NP_415002.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69503" + ], + [ + "gene_synonym", + "apt" + ], + [ + "gene_synonym", + "b0469" + ] + ], + "dna_sequence": "ATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGCGCGTGGCTTCTTGTTTGGCGCTCCGGTAGCTCTGGGTCTGGGCGTTGGCTTTGTACCGGTCCGTAAACCGGGCAAACTGCCGCGTGAAACCATCAGTGAAACTTACGACCTGGAATACGGCACCGATCAGCTGGAGATCCACGTTGATGCCATCAAACCGGGCGACAAAGTTCTGGTGGTGGACGACCTGCTGGCAACCGGCGGCACTATCGAAGCGACCGTTAAACTGATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAA", + "dna_sequence_length": 552, + "functions": [ + "adenine phosphoribosyltransferase" + ], + "id": "CDS_461", + "location": [ + [ + "NC_000913", + 491412, + "+", + 552 + ] + ], + "md5": "a0589fa4b57eeb8c24aeb5805d3881f7", + "parent_gene": "", + "protein_md5": "6d41a83e06643bdacab599c5dd5ed77c", + "protein_translation": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001633" + ], + [ + "gene_synonym", + "ECK0464" + ], + [ + "gene_synonym", + "EcoGene:EG10245" + ], + [ + "gene_synonym", + "GI:16128454" + ], + [ + "gene_synonym", + "GeneID:945105" + ], + [ + "gene_synonym", + "JW0459" + ], + [ + "gene_synonym", + "NP_415003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06710" + ], + [ + "gene_synonym", + "b0470" + ], + [ + "gene_synonym", + "dnaX" + ], + [ + "gene_synonym", + "dnaZ" + ] + ], + "dna_sequence": "ATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGAAATCGAGCAGGGGCGCTTTGTCGATCTGATTGAAATCGACGCCGCCTCGCGCACCAAAGTTGAAGATACCCGCGACCTGCTGGATAACGTCCAGTACGCTCCGGCGCGTGGTCGTTTCAAAGTTTATCTGATCGACGAAGTGCATATGCTGTCGCGCCACAGCTTTAACGCACTGTTAAAAACCCTTGAAGAGCCGCCGGAGCACGTTAAGTTTCTGCTGGCGACGACCGATCCACAGAAATTGCCGGTGACGATTTTGTCACGCTGTCTGCAATTTCATCTCAAGGCGCTGGATGTCGAGCAAATTCGCCATCAGCTTGAGCACATCCTCAACGAAGAACATATCGCTCACGAGCCGCGGGCGCTGCAATTGCTGGCACGCGCCGCTGAAGGCAGCCTGCGAGATGCCTTAAGTCTGACCGACCAGGCGATTGCCAGCGGTGACGGCCAGGTTTCAACCCAGGCGGTCAGTGCGATGCTGGGTACGCTTGACGACGATCAGGCGCTGTCGCTGGTTGAAGCGATGGTCGAGGCCAACGGCGAGCGCGTAATGGCGCTGATTAATGAAGCCGCTGCCCGTGGTATCGAGTGGGAAGCGTTGCTGGTGGAAATGCTCGGCCTGTTGCATCGTATTGCGATGGTACAACTTTCGCCTGCTGCACTTGGCAACGACATGGCCGCCATCGAGCTGCGGATGCGTGAACTGGCGCGCACCATACCGCCGACGGATATTCAGCTTTACTATCAGACGCTGTTGATTGGTCGCAAAGAATTACCGTATGCGCCGGACCGTCGCATGGGCGTTGAGATGACGCTGCTGCGCGCGCTGGCATTCCATCCGCGTATGCCGCTGCCTGAGCCAGAAGTGCCACGACAGTCCTTTGCACCCGTCGCGCCAACGGCAGTAATGACGCCAACCCAGGTGCCGCCGCAACCGCAATCAGCGCCGCAGCAGGCACCGACTGTACCGCTCCCGGAAACCACCAGCCAGGTGCTGGCGGCGCGCCAGCAGTTGCAGCGCGTGCAGGGAGCAACCAAAGCAAAAAAGAGTGAACCGGCAGCCGCTACCCGCGCGCGGCCGGTGAATAACGCTGCGCTGGAAAGACTGGCTTCGGTCACCGATCGCGTTCAGGCGCGTCCGGTGCCATCGGCGCTGGAAAAAGCGCCAGCCAAAAAAGAAGCGTATCGCTGGAAGGCGACCACTCCGGTGATGCAGCAAAAAGAAGTGGTCGCCACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGACTATCGTTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCGCAGGCGCGCGAGTCCATTATTGCGGATAATAATATTCAGACCCTGCGTCGGTTCTTCGATGCGGAGCTGGATGAAGAAAGTATCCGCCCCATTTGA", + "dna_sequence_length": 1932, + "functions": [ + "DNA polymerase III/DNA elongation factor III, tau and gamma subunits" + ], + "id": "CDS_462", + "location": [ + [ + "NC_000913", + 492092, + "+", + 1932 + ] + ], + "md5": "4f24fb10d274a29135cde1d5350f2871", + "parent_gene": "", + "protein_md5": "3514bc6f19a5da6e368fab2fb2bcd3c4", + "protein_translation": "MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI", + "protein_translation_length": 643, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001636" + ], + [ + "gene_synonym", + "ECK0465" + ], + [ + "gene_synonym", + "EcoGene:EG11100" + ], + [ + "gene_synonym", + "GI:16128455" + ], + [ + "gene_synonym", + "GeneID:945104" + ], + [ + "gene_synonym", + "JW0460" + ], + [ + "gene_synonym", + "NP_415004.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8B5" + ], + [ + "gene_synonym", + "b0471" + ], + [ + "gene_synonym", + "efbC" + ], + [ + "gene_synonym", + "ybaB" + ] + ], + "dna_sequence": "ATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCGTCGCGTAGAGATCGACCCGAGCCTGCTGGAAGACGACAAAGAGATGCTGGAAGACCTGGTGGCTGCAGCATTCAACGACGCAGCACGTCGTATTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGA", + "dna_sequence_length": 330, + "functions": [ + "DNA-binding protein, putative nucleoid-associated protein" + ], + "id": "CDS_463", + "location": [ + [ + "NC_000913", + 494076, + "+", + 330 + ] + ], + "md5": "dc2b0d9e0a1048c8ca7473c5b91002c1", + "parent_gene": "", + "protein_md5": "a7c2dce10c2ff34d22b8aa674aa75c8c", + "protein_translation": "MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001638" + ], + [ + "gene_synonym", + "ECK0466" + ], + [ + "gene_synonym", + "EcoGene:EG10834" + ], + [ + "gene_synonym", + "GI:16128456" + ], + [ + "gene_synonym", + "GeneID:945100" + ], + [ + "gene_synonym", + "JW0461" + ], + [ + "gene_synonym", + "NP_415005.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7H6" + ], + [ + "gene_synonym", + "b0472" + ], + [ + "gene_synonym", + "recR" + ] + ], + "dna_sequence": "ATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATCGGCCACTGCGCCGATTGCCGCACTTTCACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTGGAACAGCGTCTGGCAGAGGAAAAAATCACTGAAGTGATCCTCGCCACCAACCCCACGGTTGAAGGTGAAGCTACCGCTAACTACATTGCCGAGCTTTGCGCGCAATATGACGTGGAAGCCAGCCGAATCGCTCATGGCGTTCCGGTTGGCGGCGAGCTGGAAATGGTCGACGGCACCACGTTGTCACACTCCCTTGCCGGGCGTCATAAGATTCGTTTTTAA", + "dna_sequence_length": 606, + "functions": [ + "gap repair protein" + ], + "id": "CDS_464", + "location": [ + [ + "NC_000913", + 494405, + "+", + 606 + ] + ], + "md5": "91e0a5527abd174815015c13b567cf4f", + "parent_gene": "", + "protein_md5": "90556cceaea882a61285fd22312b2d34", + "protein_translation": "MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001642" + ], + [ + "gene_synonym", + "ECK0467" + ], + [ + "gene_synonym", + "EcoGene:EG10461" + ], + [ + "gene_synonym", + "GI:16128457" + ], + [ + "gene_synonym", + "GeneID:945099" + ], + [ + "gene_synonym", + "JW0462" + ], + [ + "gene_synonym", + "NP_415006.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Z3" + ], + [ + "gene_synonym", + "b0473" + ], + [ + "gene_synonym", + "htpG" + ] + ], + "dna_sequence": "ATGAAAGGACAAGAAACTCGTGGTTTTCAGTCAGAAGTGAAACAGCTTCTGCACCTGATGATCCATTCTCTCTATTCCAATAAAGAAATCTTCCTGCGTGAGCTTATCTCTAACGCCTCCGATGCGGCGGACAAGCTGCGTTTCCGTGCGCTCTCTAACCCGGACCTGTACGAAGGTGATGGCGAACTACGCGTTCGTGTCTCTTTCGATAAAGACAAGCGTACGCTGACCATCTCCGATAACGGCGTGGGGATGACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGACATCACCAAAGAAGATCGTGGTACTGAAATCACCCTGCATCTGCGTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCGTTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTAACAAGTCGGAAATCACCGATGAAGAGTACAAAGAGTTCTACAAACACATCGCCCACGACTTTAATGATCCGCTGACCTGGAGCCACAACCGTGTTGAAGGTAAGCAGGAGTACACCAGCCTGCTGTACATCCCGTCCCAGGCTCCGTGGGATATGTGGAACCGCGATCATAAACACGGCCTGAAACTGTATGTTCAGCGTGTGTTCATCATGGACGACGCAGAACAGTTCATGCCGAACTATCTGCGCTTCGTGCGTGGTCTGATTGACTCCAGCGATCTGCCGCTGAACGTTTCCCGTGAAATCCTCCAGGACAGCACGGTAACGCGTAACCTGCGCAATGCGCTGACCAAGCGTGTGCTGCAAATGCTGGAAAAACTGGCGAAAGACGACGCGGAAAAATACCAGACCTTCTGGCAACAGTTTGGCCTGGTACTGAAAGAAGGTCCGGCGGAAGATTTCGCTAACCAGGAAGCGATCGCCAAACTGCTGCGTTTTGCTTCTACCCATACCGATTCTTCTGCGCAGACCGTATCTCTGGAAGACTACGTTTCCCGCATGAAAGAAGGGCAGGAGAAAATCTACTACATCACCGCAGACAGCTATGCGGCAGCGAAGAGCAGCCCGCACCTGGAACTGCTGCGTAAGAAAGGCATCGAAGTTCTGCTGCTTTCCGACCGCATCGATGAGTGGATGATGAACTATCTGACTGAGTTCGACGGTAAACCGTTCCAGTCGGTGTCTAAAGTTGACGAGTCGCTTGAAAAACTGGCTGACGAAGTTGATGAGAGCGCGAAAGAAGCGGAGAAAGCACTGACTCCGTTCATCGACCGTGTGAAAGCCCTGCTCGGCGAGCGCGTGAAAGATGTCCGTCTGACTCACCGTCTGACCGATACGCCAGCGATCGTTTCGACCGACGCGGACGAAATGAGCACTCAGATGGCGAAACTGTTCGCTGCGGCGGGCCAGAAAGTGCCAGAAGTGAAATACATCTTCGAACTGAACCCGGATCACGTACTGGTGAAACGTGCGGCAGATACTGAAGATGAAGCGAAGTTCAGCGAGTGGGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGA", + "dna_sequence_length": 1875, + "functions": [ + "protein refolding molecular co-chaperone Hsp90, Hsp70-dependent", + "heat-shock protein", + "ATPase" + ], + "id": "CDS_465", + "location": [ + [ + "NC_000913", + 495120, + "+", + 1875 + ] + ], + "md5": "0ac498d625c029e727f681b5af37b6f7", + "parent_gene": "", + "protein_md5": "46be049f6f54705e4e4750ffc9649e9d", + "protein_translation": "MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS", + "protein_translation_length": 624, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001645" + ], + [ + "gene_synonym", + "ECK0468" + ], + [ + "gene_synonym", + "EcoGene:EG10032" + ], + [ + "gene_synonym", + "GI:16128458" + ], + [ + "gene_synonym", + "GeneID:945097" + ], + [ + "gene_synonym", + "JW0463" + ], + [ + "gene_synonym", + "NP_415007.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69441" + ], + [ + "gene_synonym", + "adk" + ], + [ + "gene_synonym", + "b0474" + ], + [ + "gene_synonym", + "dnaW" + ], + [ + "gene_synonym", + "plsA" + ] + ], + "dna_sequence": "ATGCGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTTCATCATGGAGAAATATGGTATTCCGCAAATCTCCACTGGCGATATGCTGCGTGCTGCGGTCAAATCTGGCTCCGAGCTGGGTAAACAAGCAAAAGACATTATGGATGCTGGCAAACTGGTCACCGACGAACTGGTGATCGCGCTGGTTAAAGAGCGCATTGCTCAGGAAGACTGCCGTAATGGTTTCCTGTTGGACGGCTTCCCGCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATCGTTGACCGTATCGTCGGTCGCCGCGTTCATGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGATGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACAGCACCGCTGATCGGCTACTACTCCAAAGAAGCAGAAGCGGGTAATACCAAATACGCGAAAGTTGACGGCACCAAGCCGGTTGCTGAAGTTCGCGCTGATCTGGAAAAAATCCTCGGCTAA", + "dna_sequence_length": 645, + "functions": [ + "adenylate kinase" + ], + "id": "CDS_466", + "location": [ + [ + "NC_000913", + 497175, + "+", + 645 + ] + ], + "md5": "ae1edc3daf7c77e909b86021a194e83c", + "parent_gene": "", + "protein_md5": "19579ce40a7e689d7eafceb415f215e8", + "protein_translation": "MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG", + "protein_translation_length": 214, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001649" + ], + [ + "gene_synonym", + "ECK0469" + ], + [ + "gene_synonym", + "EcoGene:EG10431" + ], + [ + "gene_synonym", + "GI:16128459" + ], + [ + "gene_synonym", + "GeneID:947532" + ], + [ + "gene_synonym", + "JW0464" + ], + [ + "gene_synonym", + "NP_415008.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23871" + ], + [ + "gene_synonym", + "b0475" + ], + [ + "gene_synonym", + "hemH" + ], + [ + "gene_synonym", + "popA" + ], + [ + "gene_synonym", + "visA" + ] + ], + "dna_sequence": "ATGCGTCAGACTAAAACCGGTATCCTGCTGGCAAACCTGGGTACGCCCGATGCCCCCACACCTGAAGCGGTAAAACGCTATCTGAAACAATTTTTAAGCGACAGACGCGTGGTTGATACCTCACGGTTGTTATGGTGGCCATTGCTGCGCGGCGTGATTTTGCCGCTGCGCTCGCCGCGTGTGGCGAAGCTGTATGCCTCTGTCTGGATGGAAGGTGGCTCGCCGCTGATGGTTTACAGCCGCCAGCAACAGCAGGCGCTGGCACAACGTTTACCGGAGATGCCCGTAGCGCTGGGAATGAGCTACGGCTCGCCATCACTGGAAAGCGCCGTAGATGAACTCCTGGCAGAGCATGTAGATCATATTGTGGTGCTGCCGCTTTATCCGCAATTCTCCTGTTCTACGGTCGGTGCGGTATGGGATGAACTGGCACGCATTCTGGCGCGCAAACGTAGCATTCCGGGGATATCGTTTATACGTGATTACGCCGATAACCACGATTACATTAATGCACTGGCGAACAGCGTACGCGCTTCTTTTGCCAAACATGGCGAACCGGATCTGCTACTGCTCTCTTATCATGGCATTCCCCAGCGTTATGCAGATGAAGGCGATGATTACCCGCAACGTTGCCGCACAACGACTCGTGAACTGGCTTCCGCATTGGGGATGGCACCGGAAAAAGTGATGATGACCTTTCAGTCGCGCTTTGGTCGGGAACCCTGGCTGATGCCTTATACCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAA", + "dna_sequence_length": 963, + "functions": [ + "ferrochelatase" + ], + "id": "CDS_467", + "location": [ + [ + "NC_000913", + 498055, + "+", + 963 + ] + ], + "md5": "5d7d91e9f1ff8c825368c1848c7867a4", + "parent_gene": "", + "protein_md5": "7c2f949d42783fbb757e42e7445e27a4", + "protein_translation": "MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001651" + ], + [ + "gene_synonym", + "ECK0470" + ], + [ + "gene_synonym", + "EcoGene:EG11101" + ], + [ + "gene_synonym", + "GI:16128460" + ], + [ + "gene_synonym", + "GeneID:947514" + ], + [ + "gene_synonym", + "JW0465" + ], + [ + "gene_synonym", + "NP_415009.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23872" + ], + [ + "gene_synonym", + "aes" + ], + [ + "gene_synonym", + "b0476" + ], + [ + "gene_synonym", + "ybaC" + ] + ], + "dna_sequence": "ATGAAGCCGGAAAACAAACTACCTGTTCTGGACCTTATTTCTGCTGAAATGAAGACCGTTGTGAATACTCTTCAGCCGGATTTACCGCCCTGGCCCGCAACGGGAACGATTGCTGAGCAACGACAGTATTACACGCTTGAGCGCCGATTCTGGAATGCGGGCGCTCCAGAAATGGCAACCAGAGCTTACATGGTTCCAACAAAATATGGGCAGGTGGAAACACGTCTCTTTTGTCCGCAGCCAGATAGCCCAGCGACGCTATTTTATTTGCATGGAGGCGGTTTTATTCTCGGCAATCTCGATACCCACGATCGCATCATGCGCCTGCTGGCAAGCTACAGCCAATGTACGGTGATTGGTATTGATTACACCCTTTCACCTGAAGCGCGTTTTCCGCAAGCGATAGAGGAAATTGTGGCTGCTTGTTGTTATTTCCACCAGCAGGCGGAGGATTATCAAATCAATATGTCCCGCATTGGCTTTGCCGGTGATTCCGCAGGTGCCATGCTGGCGCTCGCCAGTGCGTTGTGGTTGCGTGATAAACAGATCGATTGCGGTAAAGTTGCGGGCGTTTTGCTGTGGTATGGGCTTTACGGATTACGGGATTCCGTGACTCGTCGTCTGTTGGGCGGTGTCTGGGATGGCTTAACGCAACAGGATTTGCAGATGTACGAAGAGGCATATTTAAGCAACGACGCGGACCGCGAGTCGCCGTATTACTGTCTGTTTAATAATGATCTCACTCGCGAAGTTCCGCCCTGTTTTATTGCCGGGGCGGAGTTCGATCCGCTGCTGGATGACAGCCGTCTGCTTTACCAGACGTTAGCGGCGCATCAGCAGCCCTGTGAGTTCAAACTCTACCCAGGCACGCTGCACGCCTTTTTGCATTATTCACGGATGATGAAAACCGCCGACGAGGCTCTTCGCGACGGCGCTCAGTTCTTTACCGCTCAGCTTTAG", + "dna_sequence_length": 960, + "functions": [ + "acetyl esterase" + ], + "id": "CDS_468", + "location": [ + [ + "NC_000913", + 499973, + "-", + 960 + ] + ], + "md5": "86c47780191d1ab92f67722eeca42028", + "parent_gene": "", + "protein_md5": "19816cf0ce1cd4f4f9a55d83b338530c", + "protein_translation": "MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGTIAEQRQYYTLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001655" + ], + [ + "gene_synonym", + "ECK0471" + ], + [ + "gene_synonym", + "EcoGene:EG11102" + ], + [ + "gene_synonym", + "GI:16128461" + ], + [ + "gene_synonym", + "GeneID:946584" + ], + [ + "gene_synonym", + "JW0466" + ], + [ + "gene_synonym", + "NP_415010.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEW6" + ], + [ + "gene_synonym", + "b0477" + ], + [ + "gene_synonym", + "gsk" + ] + ], + "dna_sequence": "ATGAAATTTCCCGGTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAGCGAAAGTGGATGATGAATTTATTGAGCGTTATGGATTAAGCGCCGGGCATTCACTGGTGATTGAGGATGATGTAGCCGAAGCGCTTTATCAGGAACTAAAACAGAAAAACCTGATTACCCATCAGTTTGCGGGTGGCACCATTGGTAACACCATGCACAACTACTCGGTGCTCGCGGACGACCGTTCGGTGCTGCTGGGCGTCATGTGCAGCAATATTGAAATTGGCAGTTATGCCTATCGTTACCTGTGTAACACTTCCAGCCGTACCGATCTTAACTATCTACAAGGCGTGGATGGCCCGATTGGTCGTTGCTTTACGCTGATTGGCGAGTCCGGGGAACGTACCTTTGCTATCAGTCCAGGCCACATGAACCAGCTGCGGGCTGAAAGCATTCCGGAAGATGTGATTGCCGGAGCCTCGGCACTGGTTCTCACCTCATATCTGGTGCGTTGCAAGCCGGGTGAACCCATGCCGGAAGCAACCATGAAAGCCATTGAGTACGCGAAGAAATATAACGTACCGGTGGTGCTGACGCTGGGCACCAAGTTTGTCATTGCCGAGAATCCGCAGTGGTGGCAGCAATTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGCGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCAGCATCCGCTGCTGCCGGGCGCTATAGCGGAATTCAACCAGTATGAGTTTAGCCGCGCCATGCGCCACAAGGATTGCCAGAATCCGCTGCGTGTATATTCGCACATTGCGCCGTACATGGGCGGGCCGGAAAAAATCATGAACACTAATGGAGCGGGGGATGGCGCATTGGCAGCGTTGCTGCATGACATTACCGCCAACAGCTACCATCGTAGCAACGTACCAAACTCCAGCAAACATAAATTCACCTGGTTAACTTATTCATCGTTAGCGCAGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAA", + "dna_sequence_length": 1305, + "functions": [ + "inosine/guanosine kinase" + ], + "id": "CDS_469", + "location": [ + [ + "NC_000913", + 500125, + "+", + 1305 + ] + ], + "md5": "6df633fa452aeac4e80ed5fa4e5460a1", + "parent_gene": "", + "protein_md5": "f8f4894b2ba9ef23ee23d36a37b7e00f", + "protein_translation": "MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALDWVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001658" + ], + [ + "gene_synonym", + "ECK0472" + ], + [ + "gene_synonym", + "EcoGene:EG12623" + ], + [ + "gene_synonym", + "GI:16128462" + ], + [ + "gene_synonym", + "GeneID:946576" + ], + [ + "gene_synonym", + "JW0467" + ], + [ + "gene_synonym", + "NP_415011.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39830" + ], + [ + "gene_synonym", + "b0478" + ], + [ + "gene_synonym", + "ybaL" + ], + [ + "gene_synonym", + "ylaA" + ] + ], + "dna_sequence": "ATGCATCACGCCACCCCGCTTATCACCACCATTGTTGGCGGCCTTGTGCTCGCCTTTATCCTCGGCATGCTGGCCAATAAACTACGTATTTCTCCTCTGGTGGGATATCTGTTAGCGGGTGTGCTGGCAGGACCATTCACTCCGGGCTTTGTTGCCGATACCAAGCTTGCCCCGGAACTGGCTGAACTGGGCGTCATTCTGTTGATGTTTGGCGTCGGTTTGCACTTTTCGCTGAAGGATTTGATGGCGGTAAAGGCCATCGCCATTCCCGGTGCGATCGCCCAGATAGCCGTGGCGACGCTGCTGGGTATGGCGCTCTCTGCCGTGCTGGGCTGGTCGTTAATGACCGGTATCGTGTTCGGTTTATGTCTTTCCACCGCCAGTACCGTGGTGTTACTGCGCGCACTTGAAGAACGGCAATTAATTGACAGTCAGCGTGGGCAAATCGCCATCGGTTGGTTGATTGTGGAAGACCTGGTAATGGTTCTGACGCTGGTGTTGCTGCCCGCAGTGGCAGGAATGATGGAACAGGGCGATGTGGGCTTTGCCACTCTTGCAGTCGATATGGGGATCACCATCGGCAAAGTGATCGCATTTATCGCCATTATGATGCTGGTAGGTCGCCGTCTGGTGCCGTGGATTATGGCACGCAGCGCGGCAACCGGTTCTCGCGAGCTGTTTACCCTGTCGGTGCTGGCGCTGGCGTTAGGGGTTGCCTTTGGTGCGGTAGAGCTGTTTGATGTCTCCTTTGCACTCGGTGCGTTCTTTGCCGGGATGGTACTGAACGAGTCTGAACTGAGTCACCGTGCCGCCCACGATACGCTGCCATTGCGCGACGCGTTTGCGGTGCTGTTTTTTGTCTCCGTCGGGATGTTGTTTGATCCGTTAATTCTGATTCAGCAACCGCTGGCAGTGCTGGCGACGCTGGCGATTATTCTGTTTGGTAAGTCGTTAGCCGCATTTTTCCTGGTGCGACTGTTTGGTCACTCCCAACGTACGGCATTAACCATCGCCGCCAGCCTGGCGCAGATTGGTGAGTTCGCGTTTATCCTGGCGGGACTGGGAATGGCATTGAATTTACTGCCGCAGGCCGGACAAAACCTGGTACTGGCAGGGGCGATCCTGTCGATTATGCTCAACCCGGTACTGTTCGCACTACTGGAGAAATATCTGGCGAAGACCGAAACGCTGGAAGAGCAGACGCTGGAAGAGGCAATCGAAGAAGAGAAGCAGATCCCAGTGGATATTTGCAACCATGCGCTACTGGTGGGTTACGGTCGTGTAGGCAGCCTGCTGGGGGAGAAATTGCTCGCCTCTGATATTCCGCTGGTGGTGATTGAGACGTCACGAACCCGTGTTGATGAGCTGCGAGAGCGCGGGGTCCGCGCAGTATTGGGCAATGCGGCGAACGAAGAAATTATGCAACTGGCGCATCTGGAATGTGCAAAATGGCTGATCCTGACGATTCCCAACGGTTATGAAGCGGGTGAGATTGTGGCATCTGCCCGCGCGAAAAATCCGGATATTGAGATTATTGCCCGCGCCCATTATGACGATGAAGTGGCGTATATCACCGAACGTGGTGCGAATCAGGTAGTGATGGGCGAGCGTGAAATCGCCCGTACCATGCTGGAACTGCTGGAAACGCCACCGGCGGGTGAGGTGGTGACGGGGTAA", + "dna_sequence_length": 1677, + "functions": [ + "inner membrane putative NAD(P)-binding transporter" + ], + "id": "CDS_470", + "location": [ + [ + "NC_000913", + 503238, + "-", + 1677 + ] + ], + "md5": "acdbb3c6ab7697f8e4c585dcb608c2a7", + "parent_gene": "", + "protein_md5": "07e4d7e681d4d66b23d6e92af2c1f0d3", + "protein_translation": "MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGVAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG", + "protein_translation_length": 558, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001661" + ], + [ + "gene_synonym", + "ECK0473" + ], + [ + "gene_synonym", + "EcoGene:EG13268" + ], + [ + "gene_synonym", + "GI:16128463" + ], + [ + "gene_synonym", + "GeneID:945119" + ], + [ + "gene_synonym", + "JW0468" + ], + [ + "gene_synonym", + "NP_415012.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52067" + ], + [ + "gene_synonym", + "b0479" + ], + [ + "gene_synonym", + "fsr" + ] + ], + "dna_sequence": "ATGGCAATGAGTGAACAACCCCAGCCTGTGGCGGGCGCGGCTGCGTCAACGACCAAGGCCCGAACATCGTTTGGTATTTTAGGTGCTATCAGCCTCTCACATCTGCTGAACGACATGATCCAATCGCTGATTCTGGCGATTTATCCGCTGCTTCAGTCAGAATTTTCTCTGACATTTATGCAGATTGGCATGATAACCCTCACCTTCCAGCTCGCCTCTTCGCTACTGCAACCAGTGGTCGGCTACTGGACCGATAAATATCCGATGCCATGGTCGTTGCCAATTGGCATGTGCTTTACCTTAAGCGGTCTGGTGCTGCTTGCGCTGGCGGGCAGTTTTGGCGCAGTTCTGCTGGCGGCGGCGCTGGTCGGTACCGGTTCATCGGTCTTTCATCCGGAATCTTCTCGCGTGGCCCGTATGGCTTCCGGCGGGCGGCATGGCCTGGCGCAATCTATCTTTCAGGTCGGCGGCAACTTTGGCAGTTCCCTGGGACCCTTGCTGGCGGCGGTGATTATCGCGCCTTATGGCAAAGGCAACGTTGCCTGGTTTGTGCTTGCGGCACTGCTGGCGATCGTGGTGTTGGCGCAAATCAGCCGTTGGTACTCGGCACAGCACCGAATGAATAAAGGAAAACCCAAAGCGACGATTATCAATCCACTGCCGCGCAATAAAGTTGTACTGGCGGTCAGCATTCTGTTAATCCTCATTTTCTCGAAATATTTCTATATGGCGAGCATCAGCAGCTATTACACCTTTTATCTGATGCAAAAATTCGGATTATCTATCCAGAATGCTCAGCTTCATCTGTTTGCCTTCCTGTTTGCCGTTGCGGCAGGTACGGTGATCGGCGGGCCTGTAGGGGATAAAATTGGGCGGAAATATGTGATTTGGGGCTCTATCCTCGGCGTTGCGCCGTTTACGCTGATTTTACCCTACGCCAGCCTGCACTGGACGGGGGTTTTAACGGTGATTATTGGATTTATCCTCGCTTCGGCATTCTCTGCCATTCTGGTCTACGCTCAGGAGCTGCTTCCAGGACGTATCGGTATGGTTTCTGGACTCTTTTTCGGTTTTGCTTTTGGCATGGGAGGTCTGGGAGCGGCAGTTCTGGGGCTTATCGCCGATCACACCAGCATCGAGTTAGTCTATAAAATCTGTGCTTTCCTGCCACTATTGGGGATGTTGACCATATTCCTGCCTGATAACCGGCATAAAGACTGA", + "dna_sequence_length": 1221, + "functions": [ + "putative fosmidomycin efflux system protein" + ], + "id": "CDS_471", + "location": [ + [ + "NC_000913", + 504696, + "-", + 1221 + ] + ], + "md5": "18ca3397871a77541f94259f1283255e", + "parent_gene": "", + "protein_md5": "9b82d4781f21605010344b7832934572", + "protein_translation": "MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFGSSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIINPLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001668" + ], + [ + "gene_synonym", + "ECK0474" + ], + [ + "gene_synonym", + "EcoGene:EG11060" + ], + [ + "gene_synonym", + "GI:16128464" + ], + [ + "gene_synonym", + "GeneID:947331" + ], + [ + "gene_synonym", + "JW0469" + ], + [ + "gene_synonym", + "NP_415013.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07024" + ], + [ + "gene_synonym", + "b0480" + ], + [ + "gene_synonym", + "ushA" + ] + ], + "dna_sequence": "ATGAAATTATTGCAGCGGGGCGTGGCGTTAGCGCTGTTAACCACATTTACACTGGCGAGTGAAACTGCTCTGGCGTATGAGCAGGATAAAACCTACAAAATTACAGTTCTGCATACCAATGATCATCATGGGCATTTTTGGCGCAATGAATATGGCGAATATGGTCTGGCGGCGCAAAAAACGCTGGTGGATGGTATCCGCAAAGAGGTTGCGGCTGAAGGCGGTAGCGTGCTGCTACTTTCCGGTGGCGACATTAACACTGGCGTGCCCGAGTCTGACTTACAGGATGCCGAACCTGATTTTCGCGGTATGAATCTGGTGGGCTATGACGCGATGGCGATCGGTAATCATGAATTTGATAATCCGCTCACCGTATTACGCCAGCAGGAAAAGTGGGCCAAGTTCCCGTTGCTTTCCGCGAATATCTACCAGAAAAGTACTGGCGAGCGCCTGTTTAAACCGTGGGCGCTGTTTAAGCGTCAGGATCTGAAAATTGCCGTTATTGGGCTGACAACCGATGACACAGCAAAAATTGGTAACCCGGAATACTTCACTGATATCGAATTTCGTAAGCCCGCCGATGAAGCGAAGCTGGTGATTCAGGAGCTGCAACAGACAGAAAAGCCAGACATTATTATCGCGGCGACCCATATGGGGCATTACGATAATGGTGAGCACGGCTCTAACGCACCGGGCGATGTGGAGATGGCACGCGCGCTGCCTGCCGGATCGCTGGCGATGATCGTCGGTGGTCACTCGCAAGATCCGGTCTGCATGGCGGCAGAAAACAAAAAACAGGTCGATTACGTGCCGGGTACGCCATGCAAACCAGATCAACAAAACGGCATCTGGATTGTGCAGGCGCATGAGTGGGGCAAATACGTGGGACGGGCTGATTTTGAGTTTCGTAATGGCGAAATGAAAATGGTTAACTACCAGCTGATTCCGGTGAACCTGAAGAAGAAAGTGACCTGGGAAGACGGGAAAAGCGAGCGCGTGCTTTACACTCCTGAAATCGCTGAAAACCAGCAAATGATCTCGCTGTTATCACCGTTCCAGAACAAAGGCAAAGCGCAGCTGGAAGTGAAAATAGGCGAAACCAATGGTCGTCTGGAAGGCGATCGTGACAAAGTGCGTTTTGTACAGACCAATATGGGGCGGTTGATTCTGGCAGCCCAAATGGATCGCACTGGTGCCGACTTTGCGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAGCCATTCGGCAATGTGGTGGTGTATGCCGACATGACCGGTAAAGAGGTGATTGATTACCTGACCGCCGTCGCGCAGATGAAGCCAGATTCAGGTGCCTACCCGCAATTTGCCAACGTTAGCTTTGTGGCGAAAGACGGCAAACTGAACGACCTTAAAATCAAAGGCGAACCGGTCGATCCGGCGAAAACTTACCGTATGGCGACATTAAACTTCAATGCCACCGGCGGTGATGGATATCCGCGCCTTGATAACAAACCGGGCTATGTGAATACCGGCTTTATTGATGCCGAAGTGCTGAAAGCGTATATCCAGAAAAGCTCGCCGCTGGATGTGAGTGTTTATGAACCGAAAGGTGAGGTGAGCTGGCAGTAA", + "dna_sequence_length": 1653, + "functions": [ + "bifunctional UDP-sugar hydrolase/5'-nucleotidase" + ], + "id": "CDS_472", + "location": [ + [ + "NC_000913", + 504914, + "+", + 1653 + ] + ], + "md5": "792d0df285e310ff8944d2ef6336f61f", + "parent_gene": "", + "protein_md5": "acd6e2367d87dbff7971d0b93bd179e7", + "protein_translation": "MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ", + "protein_translation_length": 550, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001670" + ], + [ + "gene_synonym", + "ECK0475" + ], + [ + "gene_synonym", + "EcoGene:EG12454" + ], + [ + "gene_synonym", + "GI:16128465" + ], + [ + "gene_synonym", + "GeneID:947083" + ], + [ + "gene_synonym", + "JW0470" + ], + [ + "gene_synonym", + "NP_415014.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR3" + ], + [ + "gene_synonym", + "b0481" + ], + [ + "gene_synonym", + "proX" + ], + [ + "gene_synonym", + "ybaK" + ] + ], + "dna_sequence": "ATGACACCCGCAGTTAAATTACTCGAAAAAAACAAGATTTCGTTTCAAATCCATACCTACGAGCACGATCCGGCTGAAACCAATTTTGGCGATGAAGTCGTCAAAAAATTAGGTTTGAATCCGGATCAGGTCTACAAAACGCTGCTGGTGGCAGTGAACGGTGATATGAAACACCTTGCCGTGGCCGTTACGCCGGTCGCAGGTCAACTGGATCTTAAAAAAGTAGCAAAAGCGCTGGGTGCCAAGAAAGTTGAGATGGCCGATCCGATGGTCGCGCAGCGTTCGACGGGATACCTGGTTGGGGGGATTAGCCCACTGGGGCAGAAAAAACGTCTGCCAACGATTATCGACGCCCCCGCACAAGAATTTGCCACTATTTATGTTTCCGGCGGCAAGCGCGGACTGGATATCGAACTGGCGGCAGGCGATCTGGCAAAGATCCTCGATGCCAAATTTGCTGATATCGCCCGCCGCGATTAA", + "dna_sequence_length": 480, + "functions": [ + "Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase" + ], + "id": "CDS_473", + "location": [ + [ + "NC_000913", + 507082, + "-", + 480 + ] + ], + "md5": "7ffa4368e5e124fa45288c7cc9a3fa74", + "parent_gene": "", + "protein_md5": "677dcd5545f1f8a54d803b6efc570355", + "protein_translation": "MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001673" + ], + [ + "gene_synonym", + "ECK0476" + ], + [ + "gene_synonym", + "EcoGene:EG13244" + ], + [ + "gene_synonym", + "GI:16128466" + ], + [ + "gene_synonym", + "GeneID:945124" + ], + [ + "gene_synonym", + "JW0471" + ], + [ + "gene_synonym", + "NP_415015.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77301" + ], + [ + "gene_synonym", + "b0482" + ], + [ + "gene_synonym", + "ybaP" + ] + ], + "dna_sequence": "ATGGATCTGTTGTACCGGGTAAAAACGCTTTGGGCCGCGCTGCGCGGTAATCATTACACCTGGCCTGCCATCGATATCACCCTCCCCGGCAATCGCCATTTTCATCTGATTGGCAGTATTCATATGGGTAGCCACGATATGGCTCCCCTGCCCACCCGTTTGCTCAAAAAGCTCAAAAACGCCGATGCGCTGATCGTCGAGGCGGATGTTTCCACCAGCGATACGCCTTTTGCTAATTTGCCTGCCTGCGAGGCGCTGGAAGAGCGCATTAGCGAGGAGCAACTCCAAAACCTGCAGCACATTAGCCAGGAGATGGGCATTTCTCCCTCACTCTTTTCTACCCAACCGCTGTGGCAAATCGCGATGGTTCTTCAGGCGACGCAGGCACAAAAACTGGGGCTGCGGGCAGAATACGGTATCGATTACCAGCTATTGCAGGCGGCGAAGCAACAACATAAACCCGTGATTGAACTGGAAGGGGCTGAAAACCAGATTGCCATGTTGCTCCAGCTCCCTGACAAAGGACTGGCGCTGCTGGACGATACGCTGACCCACTGGCATACCAACGCACGGTTGCTGCAACAAATGATGAGCTGGTGGCTGAATGCACCGCCGCAAAATAATGATATAACGCTGCCCAATACGTTCAGTCAGTCGCTGTACGATGTGCTGATGCATCAGCGAAATCTCGCCTGGCGGGATAAATTACGCGCCATGCCGCCGGGGCGATATGTGGTCGCGGTCGGTGCACTACACCTGTATGGAGAAGGGAATTTGCCGCAAATGTTGCGCTAA", + "dna_sequence_length": 795, + "functions": [ + "TraB family protein" + ], + "id": "CDS_474", + "location": [ + [ + "NC_000913", + 508080, + "-", + 795 + ] + ], + "md5": "ae5803b5a30606442c3d259e21cd8d4f", + "parent_gene": "", + "protein_md5": "955e9d6870bf40a4e65d45a752744566", + "protein_translation": "MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001677" + ], + [ + "gene_synonym", + "ECK0477" + ], + [ + "gene_synonym", + "EcoGene:EG13245" + ], + [ + "gene_synonym", + "GI:90111140" + ], + [ + "gene_synonym", + "GeneID:948800" + ], + [ + "gene_synonym", + "JW0472" + ], + [ + "gene_synonym", + "NP_415016.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T6" + ], + [ + "gene_synonym", + "b0483" + ], + [ + "gene_synonym", + "ybaQ" + ] + ], + "dna_sequence": "ATGAAACAGGCAACAAGAAAACCGACGACACCCGGAGATATTCTTCTCTATGAATATCTGGAACCGCTCGATTTGAAAATCAATGAGTTAGCAGAGTTGCTGCATGTTCATCGTAATAGCGTCAGTGCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAA", + "dna_sequence_length": 342, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_475", + "location": [ + [ + "NC_000913", + 508218, + "+", + 342 + ] + ], + "md5": "91d0a0054653cd87da8ff3a9af9151c7", + "parent_gene": "", + "protein_md5": "de0a7a3f6bb413800e313cbf0f79c5a3", + "protein_translation": "MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001681" + ], + [ + "gene_synonym", + "ECK0478" + ], + [ + "gene_synonym", + "EcoGene:EG13246" + ], + [ + "gene_synonym", + "GI:16128468" + ], + [ + "gene_synonym", + "GeneID:946106" + ], + [ + "gene_synonym", + "JW0473" + ], + [ + "gene_synonym", + "NP_415017.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q59385" + ], + [ + "gene_synonym", + "b0484" + ], + [ + "gene_synonym", + "copA" + ], + [ + "gene_synonym", + "ybaR" + ] + ], + "dna_sequence": "ATGTCACAAACTATCGACCTGACCCTGGACGGCCTGTCCTGCGGTCACTGCGTTAAACGCGTGAAAGAAAGTCTTGAACAGCGTCCGGATGTTGAGCAGGCGGATGTGTCTATCACTGAAGCGCACGTTACCGGGACTGCCAGTGCAGAACAGCTGATCGAAACCATCAAACAAGCGGGTTATGACGCATCTGTAAGCCACCCAAAGGCTAAACCGCTGGCGGAGTCATCAATCCCGTCGGAAGCACTGACAGCGGTTTCTGAGGCGCTTCCGGCAGCGACCGCCGATGACGATGACAGCCAGCAGTTGCTGCTGAGCGGCATGAGCTGCGCCAGCTGTGTCACCCGCGTACAAAATGCGCTGCAAAGCGTACCGGGCGTCACTCAGGCACGGGTAAACCTGGCGGAGCGTACTGCGCTGGTGATGGGCAGTGCCTCCCCACAAGATTTAGTGCAGGCGGTGGAAAAAGCGGGCTACGGCGCGGAAGCGATTGAAGATGACGCTAAACGCCGCGAGCGCCAGCAAGAAACCGCCGTCGCTACGATGAAGCGCTTCCGCTGGCAGGCAATTGTCGCACTGGCGGTGGGTATCCCGGTGATGGTCTGGGGGATGATCGGCGATAACATGATGGTCACCGCTGACAACCGCAGCCTGTGGTTGGTTATCGGCCTGATAACCCTGGCAGTGATGGTTTTCGCCGGCGGCCATTTTTACCGCAGTGCATGGAAAAGCCTGCTGAACGGTGCGGCGACGATGGATACGCTGGTGGCGCTGGGTACTGGCGTGGCGTGGCTCTATTCGATGAGCGTCAACCTGTGGCCGCAGTGGTTCCCGATGGAAGCGCGACATCTTTATTACGAAGCCAGCGCGATGATTATCGGTCTGATCAATCTCGGCCATATGCTGGAAGCGCGCGCACGCCAGCGTTCTTCTAAGGCGCTGGAAAAGTTACTCGATTTAACCCCGCCGACGGCACGCCTGGTTACTGACGAAGGTGAAAAAAGCGTGCCTCTGGCAGAAGTGCAGCCAGGTATGTTGCTGCGCCTGACGACCGGCGATCGCGTGCCGGTAGATGGCGAGATTACCCAGGGCGAAGCATGGCTGGATGAAGCGATGCTGACGGGCGAACCAATCCCGCAGCAAAAAGGCGAAGGCGATAGCGTCCATGCCGGGACAGTGGTACAGGACGGCAGTGTGCTGTTTCGTGCCAGTGCGGTTGGCAGCCATACTACGCTGTCACGAATCATTCGCATGGTGCGCCAGGCCCAGAGCAGCAAGCCAGAAATCGGTCAGCTGGCGGATAAAATCTCAGCCGTATTTGTGCCGGTAGTGGTGGTTATTGCGCTTGTCAGTGCGGCAATCTGGTATTTCTTTGGTCCGGCACCGCAGATTGTCTATACCCTGGTGATTGCCACCACGGTACTGATTATTGCCTGTCCGTGTGCGCTGGGGCTGGCGACGCCGATGTCGATTATTTCCGGCGTCGGGCGGGCGGCTGAGTTTGGCGTGCTGGTGCGGGACGCTGACGCGCTGCAACGCGCCAGTACACTCGACACTGTAGTGTTCGATAAAACCGGGACGCTGACTGAAGGGAAGCCGCAGGTTGTCGCAGTGAAAACATTTGCTGATGTTGATGAAGCGCAGGCATTGCGTCTGGCGGCGGCACTGGAGCAAGGTTCCAGCCATCCGCTGGCACGAGCGATCCTCGATAAAGCAGGTGATATGCAGCTACCGCAGGTCAACGGTTTCCGCACATTGCGCGGGCTGGGCGTGAGCGGTGAAGCTGAAGGTCATGCGTTATTGCTGGGCAATCAGGCGCTGTTAAATGAGCAACAGGTTGGTACCAAAGCTATCGAAGCGGAGATTACTGCTCAGGCATCGCAAGGGGCAACGCCTGTGCTGCTGGCGGTTGACGGGAAAGCGGTAGCCCTGCTGGCAGTACGCGATCCGTTGCGTAGTGATAGCGTGGCGGCGCTGCAACGCCTGCATAAAGCGGGATATCGTCTGGTGATGTTGACCGGGGATAACCCAACCACCGCCAATGCGATCGCCAAAGAAGCAGGGATTGATGAGGTGATCGCCGGGGTGCTGCCGGACGGTAAAGCCGAAGCGATCAAACATCTGCAAAGTGAAGGACGTCAGGTGGCAATGGTGGGCGACGGCATTAACGACGCGCCAGCGCTGGCTCAGGCGGATGTCGGCATTGCGATGGGTGGCGGCAGTGATGTTGCCATTGAAACCGCGGCGATTACCCTGATGCGCCATAGCCTGATGGGCGTTGCGGATGCGCTCGCTATTTCCCGCGCAACGCTGCACAACATGAAGCAGAACCTGCTCGGTGCGTTTATCTACAACAGTATCGGTATTCCGGTCGCCGCCGGTATTTTGTGGCCGTTCACTGGAACACTGCTTAACCCGGTAGTTGCCGGAGCGGCAATGGCGCTCTCGTCGATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGGTTTAAACCGAAGGAATAA", + "dna_sequence_length": 2505, + "functions": [ + "copper transporter" + ], + "id": "CDS_476", + "location": [ + [ + "NC_000913", + 511379, + "-", + 2505 + ] + ], + "md5": "faf01bae751344403862b1feb7ac1096", + "parent_gene": "", + "protein_md5": "0a0881ae63fe50c130e320dcbb1582b6", + "protein_translation": "MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKAIEAEITAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE", + "protein_translation_length": 834, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001688" + ], + [ + "gene_synonym", + "ECK0479" + ], + [ + "gene_synonym", + "EcoGene:EG13247" + ], + [ + "gene_synonym", + "GI:16128469" + ], + [ + "gene_synonym", + "GeneID:946187" + ], + [ + "gene_synonym", + "JW0474" + ], + [ + "gene_synonym", + "NP_415018.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77454" + ], + [ + "gene_synonym", + "b0485" + ], + [ + "gene_synonym", + "glsA" + ], + [ + "gene_synonym", + "glsA1" + ], + [ + "gene_synonym", + "ybaS" + ] + ], + "dna_sequence": "ATGTTAGATGCAAACAAATTACAGCAGGCAGTGGATCAGGCTTACACCCAATTTCACTCACTTAACGGCGGACAAAATGCCGATTACATTCCCTTTCTGGCGAATGTACCAGGTCAACTGGCGGCAGTGGCTATCGTGACCTGCGATGGCAACGTCTATAGTGCGGGTGACAGTGATTACCGCTTTGCACTGGAATCCATCTCGAAAGTCTGTACGTTAGCCCTTGCGTTAGAAGATGTCGGCCCGCAGGCGGTACAGGACAAAATTGGCGCTGACCCGACCGGATTGCCCTTTAACTCAGTTATCGCCTTAGAGTTGCATGGCGGCAAACCGCTTTCGCCACTGGTAAATGCTGGCGCTATTGCCACCACCAGCCTGATTAACGCTGAAAATGTTGAACAACGCTGGCAGCGAATTTTACATATCCAACAGCAACTGGCTGGCGAGCAGGTAGCGCTCTCTGACGAAGTCAACCAGTCGGAACAAACAACCAACTTCCATAACCGGGCCATAGCCTGGCTGCTGTACTCCGCCGGATATCTCTATTGTGATGCAATGGAAGCCTGTGACGTGTATACCCGTCAGTGCTCCACGCTCCTCAATACTATTGAACTGGCAACGCTTGGCGCGACGCTGGCGGCAGGTGGTGTGAATCCGTTGACGCATAAACGCGTTCTTCAGGCCGACAACGTGCCGTACATTCTGGCCGAAATGATGATGGAAGGGCTGTATGGTCGCTCCGGTGACTGGGCGTATCGTGTTGGTTTACCGGGCAAAAGCGGTGTAGGTGGCGGTATTCTGGCGGTCGTCCCTGGAGTGATGGGAATTGCCGCGTTCTCACCACCGCTGGACGAAGATGGCAACAGTGTTCGCGGTCAAAAAATGGTGGCATCGGTCGCTAAGCAACTCGGCTATAACGTGTTTAAGGGCTGA", + "dna_sequence_length": 933, + "functions": [ + "glutaminase 1" + ], + "id": "CDS_477", + "location": [ + [ + "NC_000913", + 511641, + "+", + 933 + ] + ], + "md5": "e1aa4c6ea2eb3631838dff5a6f8b2c5c", + "parent_gene": "", + "protein_md5": "5694d78b07062d40c14aa4526ef3273d", + "protein_translation": "MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001690" + ], + [ + "gene_synonym", + "ECK0480" + ], + [ + "gene_synonym", + "EcoGene:EG13248" + ], + [ + "gene_synonym", + "GI:16128470" + ], + [ + "gene_synonym", + "GeneID:945363" + ], + [ + "gene_synonym", + "JW0475" + ], + [ + "gene_synonym", + "NP_415019.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77400" + ], + [ + "gene_synonym", + "b0486" + ], + [ + "gene_synonym", + "ybaT" + ] + ], + "dna_sequence": "ATGATGAACACGGAAGGTAATAACGGTAACAAACCTCTCGGTCTATGGAACGTCGTTTCCATCGGCATTGGGGCAATGGTGGGGGCGGGGATCTTCGCGCTGCTGGGGCAGGCTGCATTGCTAATGGAAGCCTCGACCTGGGTCGCCTTTGCTTTTGGCGGTATTGTGGCGATGTTTTCCGGTTATGCCTATGCGCGTCTGGGGGCGAGCTATCCCAGCAATGGCGGCATTATCGACTTCTTTCGTCGCGGATTAGGCAACGGCGTCTTTTCGCTGGCGCTCTCGTTACTGTACCTGTTGACGCTGGCGGTGAGCATCGCCATGGTCGCCCGTGCTTTTGGCGCTTATGCCGTGCAGTTTTTGCATGAAGGCAGCCAGGAGGAGCACCTTATTTTGCTCTACGCGTTGGGGATCATTGCGGTGATGACGCTTTTCAACTCCTTAAGCAACCATGCGGTAGGGCGGCTGGAAGTGATCCTCGTCGGCATTAAAATGATGATCCTGTTATTGCTGATTATTGCCGGTGTCTGGTCGCTGCAACCGGCGCATATTTCCGTCTCTGCGCCCCCCAGCTCCGGTGCGTTCTTCTCCTGTATTGGGATAACTTTCCTTGCCTATGCGGGCTTTGGCATGATGGCGAACGCGGCGGATAAAGTGAAAGATCCGCAGGTCATTATGCCACGGGCGTTTCTGGTGGCGATTGGCGTTACCACGTTGCTTTATATCTCGCTGGCACTGGTTTTGCTTAGCGATGTATCGGCATTAGAGTTAGAAAAATATGCCGATACCGCCGTAGCGCAGGCTGCTTCTCCGCTGCTCGGGCATGTGGGTTATGTGATCGTCGTCATCGGCGCTTTACTGGCGACGGCTTCAGCCATTAACGCGAACCTGTTCGCCGTGTTTAACATCATGGACAACATGGGCAGCGAACGCGAACTGCCGAAGCTAATGAATAAATCCCTGTGGCGGCAGAGTACCTGGGGCAACATTATTGTCGTGGTGTTGATTATGCTGATGACGGCGGCACTGAATTTAGGCTCACTCGCCAGCGTTGCCAGCGCCACCTTTTTGATTTGCTACCTGGCGGTGTTTGTGGTGGCGATCCGCCTGCGTCATGATATTCACGCCTCGTTGCCGATTCTTATCGTTGGTACGTTGGTGATGTTGTTGGTGATCGTTGGCTTTATCTACAGTCTGTGGTCCCAGGGTAGCCGTGCGTTGATATGGATTATTGGCTCACTCTTACTCAGCCTTATTGTGGCAATGGTCATGAAGCGCAATAAAACCGTATAA", + "dna_sequence_length": 1293, + "functions": [ + "putative amino acid transporter" + ], + "id": "CDS_478", + "location": [ + [ + "NC_000913", + 512576, + "+", + 1293 + ] + ], + "md5": "98e98106a15d02282150be9b6a0c8ce6", + "parent_gene": "", + "protein_md5": "1956a8e47f72b42f52110c328f394d60", + "protein_translation": "MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001693" + ], + [ + "gene_synonym", + "ECK0481" + ], + [ + "gene_synonym", + "EcoGene:EG13256" + ], + [ + "gene_synonym", + "GI:16128471" + ], + [ + "gene_synonym", + "GeneID:945332" + ], + [ + "gene_synonym", + "JW0476" + ], + [ + "gene_synonym", + "NP_415020.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G4" + ], + [ + "gene_synonym", + "b0487" + ], + [ + "gene_synonym", + "cueR" + ], + [ + "gene_synonym", + "ybbI" + ] + ], + "dna_sequence": "ATGAACATCAGCGATGTAGCAAAAATTACCGGCCTGACCAGCAAAGCCATTCGCTTCTATGAAGAGAAGGGGCTGGTGACGCCGCCGATGCGCAGCGAAAACGGTTATCGCACCTACACGCAGCAGCATCTCAACGAACTGACCTTACTGCGCCAGGCACGGCAGGTGGGCTTTAACCTGGAAGAGAGCGGCGAGCTGGTGAATCTGTTTAACGACCCGCAGCGGCACAGCGCCGACGTCAAACGGCGCACGCTGGAGAAGGTGGCGGAGATCGAACGACACATTGAGGAGCTGCAATCCATGCGCGACCAGCTGCTGGCACTGGCGAATGCCTGCCCTGGCGATGACAGCGCCGACTGCCCGATTATCGAAAATCTCTCCGGCTGCTGTCATCATCGGGCAGGGTGA", + "dna_sequence_length": 408, + "functions": [ + "copper-responsive regulon transcriptional regulator" + ], + "id": "CDS_479", + "location": [ + [ + "NC_000913", + 513993, + "+", + 408 + ] + ], + "md5": "3b93e26fe9ae886813f2e4671cec7fc7", + "parent_gene": "", + "protein_md5": "d5ede7fa852bcbb40f345a0f77c2fb31", + "protein_translation": "MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADCPIIENLSGCCHHRAG", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001695" + ], + [ + "gene_synonym", + "ECK0482" + ], + [ + "gene_synonym", + "EcoGene:EG13257" + ], + [ + "gene_synonym", + "GI:145698226" + ], + [ + "gene_synonym", + "GeneID:945126" + ], + [ + "gene_synonym", + "JW5065" + ], + [ + "gene_synonym", + "NP_415021.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAS3" + ], + [ + "gene_synonym", + "b0488" + ], + [ + "gene_synonym", + "ybbJ" + ] + ], + "dna_sequence": "ATGATGGAGTTAATGGTCGTTCATCCACATATTTTCTGGCTCAGTCTCGGCGGTTTGCTGCTGGCAGCCGAGATGCTGGGCGGAAATGGTTATTTGTTGTGGAGCGGCGTGGCAGCGGTGATTACCGGCCTGGTGGTCTGGCTGGTGCCGCTGGGTTGGGAGTGGCAAGGGGTAATGTTTGCCATCCTGACGCTGCTCGCCGCCTGGCTGTGGTGGAAATGGTTGTCGCGGCGGGTGCGCGAACAAAAGCACAGCGATAGTCATTTAAACCAGCGCGGGCAGCAGCTGATTGGCCGACGTTTTGTGCTGGAATCTCCGCTGGTCAACGGGCGCGGTCATATGCGCGTCGGTGACAGTTCATGGCCTGTCAGCGCCAGCGAGGATCTCGGTGCAGGTACGCATGTTGAAGTCATTGCGATAGAAGGGATAACCCTACATATCCGAGCCGTCTCGTCTTAA", + "dna_sequence_length": 459, + "functions": [ + "inner membrane protein", + "stimulator of the QmcA suppressor of ftsH-htpX" + ], + "id": "CDS_480", + "location": [ + [ + "NC_000913", + 514859, + "-", + 459 + ] + ], + "md5": "0c9225611c79151b257e4ffbf924b8a3", + "parent_gene": "", + "protein_md5": "22cceb8ea8572d920b6ea0113afe5ddb", + "protein_translation": "MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001697" + ], + [ + "gene_synonym", + "ECK0483" + ], + [ + "gene_synonym", + "EcoGene:EG13258" + ], + [ + "gene_synonym", + "GI:16128473" + ], + [ + "gene_synonym", + "GeneID:947257" + ], + [ + "gene_synonym", + "JW0478" + ], + [ + "gene_synonym", + "NP_415022.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA53" + ], + [ + "gene_synonym", + "b0489" + ], + [ + "gene_synonym", + "qmcA" + ], + [ + "gene_synonym", + "ybbK" + ] + ], + "dna_sequence": "ATGCTTATCTTTATCCCGATTCTCATTTTTGTCGCGCTGGTCATTGTCGGCGCGGGTGTCAAAATCGTACCGCAGGGCTATCAGTGGACAGTAGAACGCTTTGGTCGCTATACCAAAACGTTACAGCCGGGGCTCAGTCTGGTGGTGCCGTTTATGGATCGCATTGGTCGCAAGATCAATATGATGGAGCAAGTGCTCGATATCCCTTCCCAGGAAGTTATCTCGAAAGATAACGCCAACGTTACCATCGACGCCGTGTGCTTTATTCAGGTGATTGACGCGCCGCGCGCGGCTTATGAAGTCAGCAATCTGGAGCTGGCGATCATCAACCTGACCATGACTAACATCCGTACCGTGCTGGGTTCAATGGAACTTGACGAAATGCTCTCTCAGCGCGACAGCATCAACTCACGCCTGCTGCGTATTGTCGATGAAGCCACCAACCCGTGGGGGATTAAAGTCACCCGTATTGAAATTCGCGACGTGCGCCCACCGGCAGAGCTTATCTCTTCAATGAACGCGCAGATGAAAGCGGAACGTACCAAACGCGCTTACATTCTTGAAGCGGAAGGGATCCGTCAGGCGGAAATCCTCAAAGCCGAAGGTGAAAAACAGTCGCAAATCCTGAAAGCGGAAGGCGAACGTCAGTCGGCGTTTTTACAGGCTGAAGCGCGTGAACGTTCCGCCGAAGCAGAAGCCCGCGCCACCAAAATGGTGTCTGAAGCTATCGCCTCCGGTGATATTCAGGCGGTGAACTACTTCGTAGCGCAGAAATACACCGAAGCGTTACAGCAGATCGGTTCCTCCAGTAACAGCAAAGTAGTGATGATGCCATTAGAGGCCAGCAGCCTGATGGGGTCGATTGCCGGGATTGCCGAGCTGGTGAAAGACAGCGCCAACAAACGGACTCAGCCATGA", + "dna_sequence_length": 918, + "functions": [ + "PHB domain membrane-anchored putative protease" + ], + "id": "CDS_481", + "location": [ + [ + "NC_000913", + 515773, + "-", + 918 + ] + ], + "md5": "3b460c06493a77e617472e4e0dca0153", + "parent_gene": "", + "protein_md5": "387f8d4713918680be5812f660828394", + "protein_translation": "MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001703" + ], + [ + "gene_synonym", + "ECK0484" + ], + [ + "gene_synonym", + "EcoGene:EG13259" + ], + [ + "gene_synonym", + "GI:16128474" + ], + [ + "gene_synonym", + "GeneID:946990" + ], + [ + "gene_synonym", + "JW0479" + ], + [ + "gene_synonym", + "NP_415023.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77279" + ], + [ + "gene_synonym", + "b0490" + ], + [ + "gene_synonym", + "fetA" + ], + [ + "gene_synonym", + "ybbL" + ] + ], + "dna_sequence": "ATGCAGGAAAATAGTCCTTTGCTTCAGCTACAAAACGTAGGATATCTGGCGGGTGATGCGAAGATTCTTAATAACATCAATTTTTCGCTGCGTGCTGGCGAATTTAAGTTAATTACCGGTCCTTCTGGTTGTGGCAAAAGTACGCTGCTAAAAATAGTTGCTTCATTGATCAGCCCAACCAGCGGAACGTTACTGTTTGAAGGTGAGGATGTCAGCACACTAAAGCCAGAAATCTACCGCCAACAAGTCTCTTACTGCGCCCAGACACCGACGCTGTTTGGCGATACGGTATACGATAATCTGATCTTTCCCTGGCAGATCCGTAACCGGCAGCCTGACCCAGCCATTTTTCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACGTCAATGAGATGATCCATCGTTATGTGCGCGAGCAAAATATTGCCGTGCTGTGGGTGACACACGATAAAGACGAAATTAATCATGCGGATAAAGTGATTACACTGCAACCGCATGCCGGAGAAATGCAGGAAGCACGCTATGAACTCGCATAA", + "dna_sequence_length": 678, + "functions": [ + "iron export ABC transporter ATPase", + "peroxide resistance protein" + ], + "id": "CDS_482", + "location": [ + [ + "NC_000913", + 515919, + "+", + 678 + ] + ], + "md5": "00479e453bec3d22be7d2cda72774372", + "parent_gene": "", + "protein_md5": "78e737f41dea33e1d1e828d78a1f9822", + "protein_translation": "MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001705" + ], + [ + "gene_synonym", + "ECK0485" + ], + [ + "gene_synonym", + "EcoGene:EG13260" + ], + [ + "gene_synonym", + "GI:90111141" + ], + [ + "gene_synonym", + "GeneID:945137" + ], + [ + "gene_synonym", + "JW5066" + ], + [ + "gene_synonym", + "NP_415024.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77307" + ], + [ + "gene_synonym", + "b0491" + ], + [ + "gene_synonym", + "fetB" + ], + [ + "gene_synonym", + "ybbM" + ] + ], + "dna_sequence": "ATGAACTCGCATAATATTACTAACGAATCATTAGCACTGGCATTAATGCTGGTGGTGGTGGCAATCTTAATTAGCCATAAAGAAAAACTGGCGCTGGAGAAAGATATTCTCTGGAGCGTCGGGCGAGCGATAATTCAGCTGATTATTGTCGGCTATGTGCTGAAGTATATTTTCAGCGTGGATGATGCCAGCCTGACATTATTGATGGTGTTATTTATCTGCTTTAATGCGGCGTGGAACGCGCAAAAACGCAGTAAATATATTGCTAAAGCTTTTATCTCATCGTTTATTGCCATTACGGTCGGGGCGGGAATTACCCTGGCGGTGCTGATTCTCTCAGGGTCGATTGAATTTATCCCGATGCAGGTGATCCCTATCGCCGGGATGATTGCCGGTAACGCCATGGTAGCGGTGGGGTTGTGTTACAACAATTTAGGGCAACGGGTCATTAGCGAACAGCAACAGATTCAGGAGAAACTGAGTCTTGGTGCGACGCCGAAGCAGGCTTCAGCGATATTGATTCGCGACAGTATTCGCGCGGCTTTAATTCCGACGGTCGATTCAGCAAAAACGGTTGGCTTAGTGAGTTTACCAGGAATGATGTCCGGGCTGATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGA", + "dna_sequence_length": 780, + "functions": [ + "iron export ABC transporter permease", + "peroxide resistance protein" + ], + "id": "CDS_483", + "location": [ + [ + "NC_000913", + 516583, + "+", + 780 + ] + ], + "md5": "2697f0ad5d1506ddf94745a2092f6c6e", + "parent_gene": "", + "protein_md5": "057c039d5e1ce6bca6144cf710d89113", + "protein_translation": "MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001707" + ], + [ + "gene_synonym", + "ECK0486" + ], + [ + "gene_synonym", + "EcoGene:EG13261" + ], + [ + "gene_synonym", + "GI:90111142" + ], + [ + "gene_synonym", + "GeneID:947119" + ], + [ + "gene_synonym", + "JW5067" + ], + [ + "gene_synonym", + "NP_415025.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77395" + ], + [ + "gene_synonym", + "b0492" + ], + [ + "gene_synonym", + "ybbN" + ] + ], + "dna_sequence": "ATGTCCGTAGAAAATATTGTCAACATTAACGAATCTAACCTGCAACAGGTTCTTGAACAGTCGATGACCACTCCGGTGCTGTTCTATTTTTGGTCTGAACGTAGCCAGCACTGTTTGCAGTTAACCCCAATTCTGGAAAGCCTCGCGGCGCAGTACAACGGGCAATTTATTCTGGCGAAGCTGGACTGCGACGCGGAGCAGATGATTGCCGCGCAGTTTGGTCTGCGTGCGATTCCGACCGTGTATCTGTTCCAGAACGGGCAACCGGTAGATGGCTTCCAGGGGCCGCAACCGGAAGAGGCGATCCGCGCCCTGCTGGATAAAGTGCTGCCGCGCGAAGAAGAGCTGAAAGCGCAGCAGGCGATGCAACTGATGCAGGAAAGCAATTACACCGATGCCCTGCCATTGCTGAAAGACGCCTGGCAGTTGTCGAATCAGAACGGGGAGATCGGCCTGCTGCTGGCAGAAACGCTGATTGCGCTGAACCGTTCTGAAGATGCGGAAGCGGTGCTGAAAACCATTCCGTTGCAGGATCAGGACACCCGCTACCAGGGGCTGGTGGCGCAAATCGAACTGCTGAAGCAGGCGGCTGATACGCCGGAAATTCAACAGTTGCAACAGCAGGTGGCGGAGAATCCAGAAGATGCCGCACTGGCGACGCAACTGGCGCTGCAACTGCATCAGGTTGGGCGCAATGAAGAGGCGCTGGAGTTGCTGTTCGGGCATCTGCGTAAAGATCTCACCGCCGCAGACGGTCAGACGCGTAAAACGTTCCAGGAGATCCTCGCTGCGCTGGGTACGGGTGATGCACTGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGA", + "dna_sequence_length": 855, + "functions": [ + "DnaK co-chaperone, thioredoxin-like protein" + ], + "id": "CDS_484", + "location": [ + [ + "NC_000913", + 518279, + "-", + 855 + ] + ], + "md5": "c938b9d03af2aee3407c3f0cdea29b3f", + "parent_gene": "", + "protein_md5": "78e337f55c30e8db209d8c2c35083444", + "protein_translation": "MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001709" + ], + [ + "gene_synonym", + "ECK0487" + ], + [ + "gene_synonym", + "EcoGene:EG13262" + ], + [ + "gene_synonym", + "GI:16128477" + ], + [ + "gene_synonym", + "GeneID:945337" + ], + [ + "gene_synonym", + "JW0482" + ], + [ + "gene_synonym", + "NP_415026.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP4" + ], + [ + "gene_synonym", + "b0493" + ], + [ + "gene_synonym", + "ybbO" + ] + ], + "dna_sequence": "ATGACTCATAAAGCAACGGAGATCCTGACAGGTAAAGTTATGCAAAAATCGGTCTTAATTACCGGATGTTCCAGTGGAATTGGCCTGGAAAGCGCGCTCGAATTAAAACGCCAGGGTTTTCATGTGCTGGCAGGTTGCCGGAAACCGGATGATGTTGAGCGCATGAACAGCATGGGATTTACCGGCGTGTTGATCGATCTGGATTCACCAGAAAGTGTTGATCGCGCAGCCGACGAGGTGATCGCCCTGACCGATAATTGTCTGTATGGGATCTTTAACAATGCCGGATTCGGCATGTATGGCCCCCTTTCCACCATCAGCCGTGCGCAGATGGAACAGCAGTTTTCCGCCAACTTTTTCGGCGCACACCAGCTCACCATGCGCCTGTTACCCGCGATGTTACCGCACGGTGAAGGGCGTATTGTGATGACATCATCGGTGATGGGATTAATCTCCACGCCGGGTCGTGGCGCTTACGCGGCCAGTAAATATGCGCTGGAGGCGTGGTCAGATGCACTGCGCATGGAGCTGCGCCACAGCGGAATTAAAGTCAGCCTGATCGAACCCGGTCCCATTCGTACTCGCTTCACCGACAACGTCAACCAGACGCAAAGTGATAAACCAGTCGAAAATCCCGGCATCGCCGCCCGCTTTACGTTGGGACCGGAAGCGGTGGTGGACAAAGTACGCCATGCTTTTATTAGCGAGAAGCCGAAGATGCGCTATCCGGTGACGCTGGTGACCTGGGCGGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGA", + "dna_sequence_length": 810, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_485", + "location": [ + [ + "NC_000913", + 519149, + "-", + 810 + ] + ], + "md5": "3b6702e0e0eda88aa36c19ece582f9a9", + "parent_gene": "", + "protein_md5": "92659115632610ae29aaf90fb7e32ae9", + "protein_translation": "MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001713" + ], + [ + "gene_synonym", + "ECK0488" + ], + [ + "gene_synonym", + "EcoGene:EG11542" + ], + [ + "gene_synonym", + "GI:16128478" + ], + [ + "gene_synonym", + "GeneID:945127" + ], + [ + "gene_synonym", + "JW0483" + ], + [ + "gene_synonym", + "NP_415027.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADA1" + ], + [ + "gene_synonym", + "apeA" + ], + [ + "gene_synonym", + "b0494" + ], + [ + "gene_synonym", + "pldC" + ], + [ + "gene_synonym", + "tesA" + ] + ], + "dna_sequence": "ATGATGAACTTCAACAATGTTTTCCGCTGGCATTTGCCCTTCCTGTTCCTGGTCCTGTTAACCTTCCGTGCCGCCGCAGCGGACACGTTATTGATTCTGGGTGATAGCCTGAGCGCCGGGTATCGAATGTCTGCCAGCGCGGCCTGGCCTGCCTTGTTGAATGATAAGTGGCAGAGTAAAACGTCGGTAGTTAATGCCAGCATCAGCGGCGACACCTCGCAACAAGGACTGGCGCGCCTTCCGGCTCTGCTGAAACAGCATCAGCCGCGTTGGGTGCTGGTTGAACTGGGCGGCAATGACGGTTTGCGTGGTTTTCAGCCACAGCAAACCGAGCAAACGCTGCGCCAGATTTTGCAGGATGTCAAAGCCGCCAACGCTGAACCATTGTTAATGCAAATACGTCTGCCTGCAAACTATGGTCGCCGTTATAATGAAGCCTTTAGCGCCATTTACCCCAAACTCGCCAAAGAGTTTGATGTTCCGCTGCTGCCCTTTTTTATGGAAGAGGTCTACCTCAAGCCACAATGGATGCAGGATGACGGTATTCATCCCAACCGCGACGCCCAGCCGTTTATTGCCGACTGGATGGCGAAGCAGTTGCAGCCTTTAGTAAATCATGACTCATAA", + "dna_sequence_length": 627, + "functions": [ + "acyl-CoA thioesterase 1 and protease I and lysophospholipase L1" + ], + "id": "CDS_486", + "location": [ + [ + "NC_000913", + 519765, + "-", + 627 + ] + ], + "md5": "597029ecf4ff01b03cd10cd1fff387e1", + "parent_gene": "", + "protein_md5": "cacb2a3c455890e713cdc700f6ed12ea", + "protein_translation": "MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001717" + ], + [ + "gene_synonym", + "ECK0489" + ], + [ + "gene_synonym", + "EcoGene:EG11657" + ], + [ + "gene_synonym", + "GI:16128479" + ], + [ + "gene_synonym", + "GeneID:945122" + ], + [ + "gene_synonym", + "JW0484" + ], + [ + "gene_synonym", + "NP_415028.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T8" + ], + [ + "gene_synonym", + "b0495" + ], + [ + "gene_synonym", + "ybbA" + ] + ], + "dna_sequence": "ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCACCGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGAAAACGTCGAGCTTCCGGCTCTGCTGCGCGGTGAGAGTAGCGCGGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATCATCTTCCGGCACAGCTTTCCGGCGGTGAACAGCAACGAGTGGCGCTGGCACGAGCCTTTAATGGTCGACCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGACCTGCTGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA", + "dna_sequence_length": 687, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_487", + "location": [ + [ + "NC_000913", + 519733, + "+", + 687 + ] + ], + "md5": "890706ea5a4f8c4464e171e46e653083", + "parent_gene": "", + "protein_md5": "4f52cdecd6ba96f0da8386afa0a8d56d", + "protein_translation": "MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001720" + ], + [ + "gene_synonym", + "ECK0490" + ], + [ + "gene_synonym", + "EcoGene:EG13263" + ], + [ + "gene_synonym", + "GI:16128480" + ], + [ + "gene_synonym", + "GeneID:945118" + ], + [ + "gene_synonym", + "JW0485" + ], + [ + "gene_synonym", + "NP_415029.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77504" + ], + [ + "gene_synonym", + "b0496" + ], + [ + "gene_synonym", + "ybbP" + ] + ], + "dna_sequence": "ATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCATGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCGCCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATCCCCCTGGCCTGAAACCGCAGGCGGGCAGCGTATTGCTGGCCCCACGCCTGATGGCACTGCTTAACCTGAAAACGGGCGACACCATTGACGTGGGCGATGCCACCTTGCGGATTGCCGGAGAAGTGATTCAGGAACCGGATTCCGGTTTTAACCCCTTCCAGATGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGTTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTCCTGCTGCTTTCGGCGCTTCTGACCTTGCTGCTGGCAGTGGCAGCGGTGGCGGTAGCGATGAATCATTACTGTCGCAGTCGCTACGATCTGGTGGCGATCCTCAAAACGCTGGGGGCAGGGCGAGCGCAACTGCGTAAGCTAATCGTCGGTCAGTGGTTGATGGTGCTGACGCTTTCAGCCGTTACCGGTGGGGCCATAGGCCTGTTGTTCGAAAACGTGTTGATGGTGCTGCTCAAGCCCGTTCTGCCTGCTGCACTACCGCCAGCCAGCCTCTGGCCGTGGCTGTGGGCGCTTGGCACCATGACGGTCATCTCGCTGCTGGTGGGGCTACGACCATATCGCTTGTTGCTGGCAACGCAGCCTTTACGCGTATTACGTAATGATGTGGTAGCGAACGTCTGGCCGCTGAAGTTTTATCTGCCGATTGTCAGTGTGGTGGTTGTGCTGCTGCTCGCCGGATTAATGGGTGGCAGCATGCTGCTTTGGGCGGTGCTGGCGGGCGCGGTAGTACTGGCTTTGCTGTGCGGTGTGCTGGGCTGGATGCTGCTGAATGTACTTCGCCGCATGACGCTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGATTAACGATAAGCCGACAGAAGGTAATGAAGATGAGGCGCTTAACCGCGAACTCAATCTTACCTGGCAAAATACGCGGCCCGATCATAATCCGATTGTCGCCGGTAACTGGCCGCCAAAAGCCGATGAAGTGTCGATGGAAGAGGGGCTGGCGAAACGCTTAAACGTTGCCCTCGGTGATACCGTGACTTTTATGGGCGATACCCAGGAGTTCCGCGCTAAAGTGACCAGCCTGCGCAAAGTGGACTGGGAAAGTCTGCGGCCTAATTTCTATTTTATTTTCCCTGAAGGGGCATTAGACGGGCAACCGCAGAGCTGGCTTACCAGTTTCCGCTGGGAGAATGGCAACGGCATGTTGACACAACTCAACCGCCAGTTCCCGACCATTAGCCTGTTAGATATTGGCGCGATTTTAAAACAGGTCGGTCAGGTGCTGGAGCAGGTAAGTCGGGCGCTGGAAGTGATGGTGGTACTGGTCACCGCCTGCGGTATGTTGCTGTTGCTGGCACAGGTGCAGGTGGGAATGCGTCAGCGTCATCAGGAGCTGGTGGTGTGGCGCACACTCGGTGCGGGGAAAAAACTGCTGCGTACCACGTTGTGGTGTGAGTTCGCCATGCTTGGGTTTGTTTCCGGCCTGGTGGCCGCAATTGGTGCGGAAACGGCGCTGGCAGTGTTGCAGGCGAAAGTGTTTGATTTTCCGTGGGAGCCAGACTGGCGATTGTGGATTGTTCTGCCGTGCAGCGGAGCGCTGCTGCTGTCGCTTTTCGGCGGCTGGCTGGGTGCGCGACTGGTTAAGGGTAAGGCGCTGTTCAGGCAGTTTGCGGGGTGA", + "dna_sequence_length": 2415, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_488", + "location": [ + [ + "NC_000913", + 520416, + "+", + 2415 + ] + ], + "md5": "2d55d899faf99ba5431003f2d257774d", + "parent_gene": "", + "protein_md5": "4cad79037f47d23a61b9af142ed8b851", + "protein_translation": "MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKALFRQFAG", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001724" + ], + [ + "gene_synonym", + "ECK0491" + ], + [ + "gene_synonym", + "EcoGene:EG10849" + ], + [ + "gene_synonym", + "GI:16128481" + ], + [ + "gene_synonym", + "GeneID:945116" + ], + [ + "gene_synonym", + "JW0486" + ], + [ + "gene_synonym", + "NP_415030.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16919" + ], + [ + "gene_synonym", + "b0497" + ], + [ + "gene_synonym", + "rhsD" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGTCCGGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGAGGCGGTGTACAGCCGCAGTGAGTCAATGTGGCTGGTGCGCGGTGGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTGAGCGGGTGCCGGGTGCTGAGGACGTACTGCCAGCGCCGCTGCCGCCGTACCGGGTGCTTACCGGGATGGCGGACCGCTTCGGGCGGACGCTGACGTACCGGCGTGAGGCCGCCGGTGACCTGGCCGGGGAAATCACCGGCGTGACGGACGGTGCCGGGCGGGAGTTCCGTCTGGTGCTGACCACGCAGGCGCAGCGTGCGGAAGAGGCCCGCACCTCTTCGCTATCTTCTTCTGACAGTTCCCGCCCTCTCTCAGCCTCAGCGTTCCCCGACACACTGCCCGGTACCGAATACGGCCCCGACAGGGGTATCCGCCTTTCGGCGGTGTGGCTGATGCACGACCCGGCATACCCGGAGAGCCTGCCCGCTGCGCCACTGGTGCGGTACACGTATACGGAAGCCGGTGAACTGCTGGCGGTATATGACCGCAGCAATACGCAGGTGCGCGCTTTCACGTATGACGCGCAGCACCCGGGCCGGATGGTGGCGCACCGTTACGCGGGAAGGCCGGAGATGCGCTACCGCTACGACGATACGGGGCGGGTGGTGGAGCAACTGAACCCGGCAGGGTTAAGCTACCGCTATCTTTATGAGCAGGACCGCATCACCGTCACCGACAGCCTGAACCGGCGTGAGGTGCTGCATACAGAAGGCGGGGCCGGGCTGAAACGGGTGGTGAAAAAAGAACTGGCGGACGGCAGCGTCACGCGCAGCGGGTATGACGCGGCAGGAAGGCTCACGGCGCAGACGGACGCGGCGGGACGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGCACCCGGCAGATGACCTGGAGCCGCTACGGGCAGTTGCTGGCGTTCACCGACTGCTCGGGCTACCAGACCCGTTATGAATACGACCGCTTCGGCCAGATGACGGCGGTCCACCGCGAGGAAGGCATCAGCCTTTACCGCCGCTATGACAACCGTGGCCGGTTAACCTCGGTGAAAGACGCACAGGGCCGTGAAACGCGGTATGAATACAACGCCGCAGGCGACCTGACTGCCGTTATCACCCCGGACGGCAACCGGAGCGAGACACAGTACGATGCGTGGGGAAAGGCGGTCAGCACCACGCAGGGCGGGCTGACGCGCAGTATGGAGTACGATGCTGCCGGACGTGTCATCAGCCTGACCAACGAGAACGGCAGCCACAGCGTCTTCAGTTACGATGCGCTGGACCGGCTGGTACAGCAGGGCGGCTTTGACGGGCGGACGCAACGTTATCATTATGACCTGACCGGAAAACTCACACAGAGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCACGGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCAGCATGAGACGAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGCCGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTATATGACCGTGACTACGGGTGGAGTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGGTATATTACTCAGGACCCGATGGGGTTGAAAGGGGGATGGAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGGAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGAAACGCAGAATAGATCTCTATGTAATGATATGGAATACTCTGGTATTGTCTGTAAAGATACTAATGGAAAATATTTTGCATCTAAGGCAGAAACTGATAATTTAAGAAAGGAGTCATATCCTCTGAAAAGAAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAA", + "dna_sequence_length": 4281, + "functions": [ + "Rhs protein with DUF4329 family putative toxin domain", + "putative neighboring cell growth inhibitor" + ], + "id": "CDS_489", + "location": [ + [ + "NC_000913", + 523261, + "+", + 4281 + ] + ], + "md5": "de111a3f0f0dd4171c99065599e26b9d", + "parent_gene": "", + "protein_md5": "2bb38a108a5186f8d6762924828c151a", + "protein_translation": "MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRVLTGMADRFGRTLTYRREAAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASAFPDTLPGTEYGPDRGIRLSAVWLMHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVILWYYDESDRITHRTVNGEPAEQWQYDGHGWLTDISHLSEGHRVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWSDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVCKDTNGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKNLVRSKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD", + "protein_translation_length": 1426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001726" + ], + [ + "gene_synonym", + "ECK0492" + ], + [ + "gene_synonym", + "EcoGene:EG11769" + ], + [ + "gene_synonym", + "GI:16128482" + ], + [ + "gene_synonym", + "GeneID:945115" + ], + [ + "gene_synonym", + "JW0487" + ], + [ + "gene_synonym", + "NP_415031.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33668" + ], + [ + "gene_synonym", + "b0498" + ], + [ + "gene_synonym", + "ybbC" + ] + ], + "dna_sequence": "ATGAAATATAGTTCAATATTTTCGATGCTTTCATTTTTTATACTATTTGCCTGTAATGAGACAGCTGTTTACGGTTCTGATGAAAACATTATTTTTATGAGGTATGTGGAAAAATTACATTTAGATAAATACTCTGTTAAAAATACGGTAAAAACTGAAACAATGGCGATACAATTAGCTGAAATATATGTTAGGTATCGCTATGGCGAACGGATTGCAGAAGAAGAAAAACCATATTTAATTACGGAACTACCAGATAGTTGGGTTGTTGAGGGAGCAAAGTTACCTTATGAAGTTGCGGGTGGTGTATTTATTATAGAAATTAATAAGAAAAATGGATGTGTTTTGAATTTCCTACATAGTAAATAA", + "dna_sequence_length": 369, + "functions": [ + "putative immunity protein" + ], + "id": "CDS_490", + "location": [ + [ + "NC_000913", + 527581, + "+", + 369 + ] + ], + "md5": "2c7b4eb7ceaeff0072ab7c8945f07251", + "parent_gene": "", + "protein_md5": "09c651c59dcbe42b31ccf97d0d5d7cf8", + "protein_translation": "MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001729" + ], + [ + "gene_synonym", + "ECK0493" + ], + [ + "gene_synonym", + "EcoGene:EG14327" + ], + [ + "gene_synonym", + "GeneID:945114" + ], + [ + "gene_synonym", + "JW0488" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77759" + ], + [ + "gene_synonym", + "b0499" + ], + [ + "gene_synonym", + "rhsH" + ], + [ + "gene_synonym", + "ylbH" + ] + ], + "dna_sequence": "CTGGCGCTGATGGATGCGGATGGAAACATTGCGTGGAGCGGGGAGTATGATGAGTGGGGCAACCAGCTGAATGAAGAGAACCCGCATCACCTGCACCAGCCGTACCGGCTGCCGGGGCAGCAGTATGATAAGGAGTCGGGGCTGTACTACAACCGGAACCGGTACTACGATCCGTTGCAGGGGCGGTATATCACTCAGGACCCGATAGGGCTGGAGGGGGGATGGAGTCTGTATGCGTATCCGCTGAATCCGGTGAATGGTATTGATCCATTAGGGTTAAGTCCCGCAGATGTAGCGCTAATAAGAAGAAAAGATCAACTAAACCATCAAAGAGCATGGGATATATTATCTGATACTTATGAAGATATGAAGAGATTAAATTTAGGTGGGACTGATCAATTTTTCCATTGTATGGCATTTTGTCGAGTGTCTAAATTAAATGACGCTGGTGTTAGCCGATCGGCGAAAGGGCTGGGTTATGAAAAAGAGATTAGAGATTACGGGTTAAATCTGTTCGGTATGTACGGCAGAAAAGTAAAGCTATCCCATTCTGAAATGATTGAAGATAATAAAAAAGACTTGGCTGTAAATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATAAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAA", + "dna_sequence_length": 708, + "id": "CDS_491", + "location": [ + [ + "NC_000913", + 527952, + "+", + 708 + ] + ], + "md5": "cef38f69f5a5559386a0d644657970ef", + "parent_gene": "", + "protein_md5": "9371d73065115cec51a7b78e9f3b5513", + "protein_translation": "LALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSPADVALIRRKDQLNHQRAWDILSDTYEDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNLFGMYGRKVKLSHSEMIEDNKKDLAVNDHGLTCPSTTDCSDRCSDYINPEHKKTIKALQDAGYLK", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001731" + ], + [ + "gene_synonym", + "ECK0494" + ], + [ + "gene_synonym", + "EcoGene:EG11770" + ], + [ + "gene_synonym", + "GeneID:945133" + ], + [ + "gene_synonym", + "JW0489" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33669" + ], + [ + "gene_synonym", + "b0501" + ], + [ + "gene_synonym", + "ybbD" + ] + ], + "dna_sequence": "ATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTATTTTTGCTATTATAATCATTGTTGTTTTATGCGTAATTACTTATCTTTATTTATACAAAGATGAATCTCTTGTAAGTAAACATTACATAAACTATATGGCAATACCAGAAAATGATGGAGTTTTTACATGGCTCCCAGATTTTTTTCCGCACGTAGCGGTGGATATATCAATATACACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTTGTGCAGAGTAA", + "dna_sequence_length": 491, + "id": "CDS_492", + "location": [ + [ + "NC_000913", + 528640, + "+", + 491 + ] + ], + "md5": "102f5f33d0b031d4f951590a73089935", + "parent_gene": "", + "protein_md5": "542173c6bb3a3c6015301be60f2e5133", + "protein_translation": "MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLPDFFPHVAVDISIYTNVEDDYFFLIFP", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4441" + ], + [ + "gene_synonym", + "EcoGene:EG14349" + ], + [ + "gene_synonym", + "GeneID:5625558" + ], + [ + "gene_synonym", + "b4632" + ], + [ + "gene_synonym", + "ylbI" + ] + ], + "dna_sequence": "AGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACT", + "dna_sequence_length": 93, + "id": "CDS_493", + "location": [ + [ + "NC_000913", + 529500, + "+", + 93 + ] + ], + "md5": "9ee0d03e94ddf80cc2e85925bf0d5272", + "parent_gene": "", + "protein_md5": "0ff12282ecf0760e0f61fa44cb6ce67d", + "protein_translation": "SGKPAARQGDMPQYGGPIVQGSAGVLIVAPT", + "protein_translation_length": 31, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001736" + ], + [ + "gene_synonym", + "ECK0495" + ], + [ + "gene_synonym", + "EcoGene:EG14285" + ], + [ + "gene_synonym", + "GeneID:946803" + ], + [ + "gene_synonym", + "JW5880" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77688" + ], + [ + "gene_synonym", + "b0502" + ], + [ + "gene_synonym", + "ylbG" + ] + ], + "dna_sequence": "ATGCTTCATACTGCCAATCCCGTCATCAAACACAAAGCCGGTTTGCTCAATCTGGCTGAAGAACTCAGCAACGTATCAAAAGCCTGTAAAATCATGGGCGTTTCGCGTGATACGTTTTATCGTTACCGCGAACTGGTCGCTGAAGGCGGTGTGGATGCGCAGATTAATCGTAGTCGCCGCGCTCCTAACCTTAAGAACCGTACCGATGAGGCAACTGAACAGGCTGTTGTTGATTACGCCGTCGCTTTCCCGACACATGGTCAGCACCGGGCCAGCAACGAGCTGCGTAAACAGGGGGTTTTTATCTCCGACAGTGGTGTCCGTTCTGTCTGGTTACTCCATAACCTTGAGAATCTCCAAAAGACGATACTGAACAAATTTTATCAGGTGACGTTCCGTAAAAAGTTGTATGGAGTTCTCGAT", + "dna_sequence_length": 423, + "id": "CDS_494", + "location": [ + [ + "NC_000913", + 530016, + "-", + 357 + ], + [ + "NC_000913", + 529660, + "-", + 66 + ] + ], + "md5": "32727c8c27de934e21980e57abe16068", + "parent_gene": "", + "protein_md5": "0dc134a80c6f3a0d6a43950c3214a4f6", + "protein_translation": "MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLQKTILNKFYQVTFRKKLYGVLD", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001740" + ], + [ + "gene_synonym", + "ECK0496" + ], + [ + "gene_synonym", + "EcoGene:EG11768" + ], + [ + "gene_synonym", + "GI:16128487" + ], + [ + "gene_synonym", + "GeneID:947063" + ], + [ + "gene_synonym", + "JW0491" + ], + [ + "gene_synonym", + "NP_415036.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33667" + ], + [ + "gene_synonym", + "b0503" + ], + [ + "gene_synonym", + "mnmH" + ], + [ + "gene_synonym", + "selE" + ], + [ + "gene_synonym", + "selU" + ], + [ + "gene_synonym", + "ybbB" + ] + ], + "dna_sequence": "ATGCAAGAGAGACACACGGAACAGGACTATCGTGCCCTGCTGATTGCTGATACGCCCATTATTGATGTTCGCGCCCCTATCGAGTTTGAGCACGGCGCAATGCCCGCCGCTATCAATCTGCCGTTAATGAATAACGATGAACGCGCCGCCGTTGGCACCTGCTATAAACAGCAAGGCTCAGACGCAGCGCTGGCGCTGGGACATAAACTGGTGGCGGGTGAAATTCGTCAGCAGCGCATGGACGCCTGGCGGGCAGCGTGCCTGCAAAATCCGCAAGGTATTCTCTGCTGCGCCCGTGGCGGTCAGCGCTCACATATTGTGCAAAGCTGGTTGCATGCAGCGGGGATTGATTATCCGCTGGTGGAAGGCGGTTATAAGGCACTGCGCCAGACCGCGATTCAGGCGACTATTGAACTGGCACAAAAACCGATAGTGCTGATTGGCGGTTGTACCGGCAGCGGTAAAACGCTGTTAGTGCAGCAACAGCCGAACGGTGTTGATCTGGAAGGGTTGGCGCGTCATCGCGGTTCGGCGTTTGGTCGCACGTTACAACCACAACTTAGCCAGGCGAGTTTTGAAAACCTGCTGGCTGCCGAAATGCTAAAAACCGACGCCCGTCAGAATTTGCGCCTGTGGGTGCTGGAAGACGAAAGCCGGATGATCGGTTCGAATCACCTGCCGGAATGCCTGCGCGAGCGAATGACTCAGGCGGCGATTGCGGTGGTAGAAGATCCGTTTGAGATCCGTCTTGAGCGCCTGAACGAAGAGTATTTCTTGCGTATGCATCATGATTTTACCCACGCGTACGGCGACGAACAGGGCTGGCAGGAGTATTGCGAATACCTGCATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGGCAGCACCGACGGTCATCTGGCCTGGCTGGTGCCGTTACTTGAAGAATATTACGACCCGATGTATCGCTATCAGCTTGAGAAAAAAGCGGAAAAAGTTGTCTTTCGCGGTGAGTGGGCGGAAGTGGCGGAATGGGTTAAGGCGCGGTAA", + "dna_sequence_length": 1095, + "functions": [ + "tRNA 2-selenouridine synthase, selenophosphate-dependent" + ], + "id": "CDS_495", + "location": [ + [ + "NC_000913", + 531226, + "-", + 1095 + ] + ], + "md5": "43a91584303b9168d1c582a90a653442", + "parent_gene": "", + "protein_md5": "d8b01b9da932c9d18b39be3493bdc33c", + "protein_translation": "MQERHTEQDYRALLIADTPIIDVRAPIEFEHGAMPAAINLPLMNNDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDESRMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNELAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFRGEWAEVAEWVKAR", + "protein_translation_length": 364, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001742" + ], + [ + "gene_synonym", + "ECK0497" + ], + [ + "gene_synonym", + "EcoGene:EG13267" + ], + [ + "gene_synonym", + "GI:16128488" + ], + [ + "gene_synonym", + "GeneID:945139" + ], + [ + "gene_synonym", + "JW0492" + ], + [ + "gene_synonym", + "NP_415037.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACR0" + ], + [ + "gene_synonym", + "allS" + ], + [ + "gene_synonym", + "b0504" + ], + [ + "gene_synonym", + "glxA1" + ], + [ + "gene_synonym", + "ybbS" + ] + ], + "dna_sequence": "ATGTTCGATCCAGAAACCTTGCGGACTTTCATTGCGGTTGCTGAAACAGGAAGTTTTTCAAAAGCGGCAGAACGATTATGTAAAACCACGGCGACGATCAGTTATCGCATTAAACTTCTGGAAGAGAATACCGGAGTAGCGCTGTTTTTCCGTACGACTCGCAGCGTGACGTTGACAGCGGCTGGCGAGCATCTACTTTCCCAGGCCAGAGACTGGCTGAGCTGGCTGGAAAGTATGCCAAGCGAGCTGCAACAGGTGAATGATGGCGTGGAACGCCAGGTGAATATTGTCATCAACAACCTGCTCTACAACCCCCAGGCCGTCGCCCAGTTGCTGGCGTGGCTGAATGAGCGTTACCCCTTTACCCAGTTTCACATCTCCCGACAAATCTATATGGGCGTCTGGGACTCGCTATTGTACGAAGGTTTTTCGCTGGCTATCGGCGTCACGGGAACTGAGGCGCTGGCAAATACCTTTAGTCTTGATCCCTTAGGATCGGTGCAATGGCGCTTTGTCATGGCGGCGGATCATCCGCTGGCGAACGTTGAAGAGCCGCTAACAGAAGCGCAGTTGCGGCGCTTTCCGGCGGTCAATATTGAAGACAGCGCCCGCACCTTAACCAAACGCGTCGCCTGGCGATTGCCAGGGCAAAAAGAGATTATTGTTCCCGATATGGAAACGAAAATCGCCGCCCATCTGGCGGGCGTTGGCATTGGTTTTTTGCCAAAATCGCTTTGCCAGTCAATGATCGATAATCAACAACTGGTCAGCCGGGTAATCCCAACGATGCGCCCTCCTTCGCCATTGAGTCTGGCATGGCGCAAATTTGGCAGCGGCAAAGCGGTAGAAGATATTGTGACCTTGTTTACCCAGCGCAGGCCGGAAATCAGCGGATTTTTAGAAATTTTCGGCAACCCACGCAGTTAA", + "dna_sequence_length": 927, + "functions": [ + "allD operon transcriptional activator" + ], + "id": "CDS_496", + "location": [ + [ + "NC_000913", + 532221, + "-", + 927 + ] + ], + "md5": "de7f96f2b4c2932297b69f636f5b423e", + "parent_gene": "", + "protein_md5": "a1ef8771fae9935051929a9f52b34c79", + "protein_translation": "MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001747" + ], + [ + "gene_synonym", + "ECK0498" + ], + [ + "gene_synonym", + "EcoGene:EG13615" + ], + [ + "gene_synonym", + "GI:16128489" + ], + [ + "gene_synonym", + "GeneID:945141" + ], + [ + "gene_synonym", + "JW0493" + ], + [ + "gene_synonym", + "NP_415038.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77731" + ], + [ + "gene_synonym", + "allA" + ], + [ + "gene_synonym", + "b0505" + ], + [ + "gene_synonym", + "glxA2" + ], + [ + "gene_synonym", + "ybbT" + ] + ], + "dna_sequence": "ATGAAACTTCAGGTATTACCGTTAAGTCAGGAAGCCTTTAGTGCTTATGGCGACGTAATCGAAACGCAGCAACGGGATTTTTTCCATATTAACAATGGCCTGGTGGAGCGTTACCACGATTTGGCGCTGGTTGAGATTCTTGAGCAAGACTGTACGCTTATCAGCATTAACCGCGCGCAACCGGCGAATCTGCCGCTGACCATTCACGAACTCGAACGTCATCCGCTGGGTACTCAGGCCTTTATCCCGATGAAAGGTGAGGTGTTTGTGGTGGTCGTGGCGTTAGGTGACGACAAACCAGACCTGTCAACGCTGCGGGCGTTTATCACCAACGGCGAACAGGGAGTGAATTACCATCGTAACGTCTGGCATCACCCACTTTTCGCCTGGCAGCGCGTCACCGATTTTCTGACCATCGATCGCGGCGGCAGTGACAACTGTGATGTTGAAAGTATTCCTGAACAGGAACTCTGTTTTGCGTGA", + "dna_sequence_length": 483, + "functions": [ + "ureidoglycolate lyase, releasing urea" + ], + "id": "CDS_497", + "location": [ + [ + "NC_000913", + 532451, + "+", + 483 + ] + ], + "md5": "218b0caabfe45dc9e939f4ff27f49d98", + "parent_gene": "", + "protein_md5": "a1ff25a19b298fae4a3cf670f80155db", + "protein_translation": "MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001750" + ], + [ + "gene_synonym", + "ECK0499" + ], + [ + "gene_synonym", + "EcoGene:EG13616" + ], + [ + "gene_synonym", + "GI:16128490" + ], + [ + "gene_synonym", + "GeneID:945333" + ], + [ + "gene_synonym", + "JW0494" + ], + [ + "gene_synonym", + "NP_415039.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACN4" + ], + [ + "gene_synonym", + "allR" + ], + [ + "gene_synonym", + "b0506" + ], + [ + "gene_synonym", + "gclR" + ], + [ + "gene_synonym", + "glxA3" + ], + [ + "gene_synonym", + "ybbU" + ] + ], + "dna_sequence": "ATGACGGAAGTTAGACGGCGCGGCAGGCCAGGACAGGCGGAGCCTGTGGCACAGAAGGGCGCACAGGCGTTAGAGCGGGGAATTGCGATTCTGCAATATTTGGAAAAAAGTGGGGGAAGTTCGTCGGTTAGCGATATTTCTCTCAATCTGGATTTGCCGCTCTCCACGACCTTTCGCTTGCTGAAGGTTTTACAGGCAGCGGATTTTGTCTATCAGGACAGTCAATTAGGCTGGTGGCATATAGGATTAGGTGTCTTTAACGTCGGTGCGGCGTACATCCATAACCGCGATGTCCTCTCCGTCGCCGGGCCGTTTATGCGCCGCCTGATGTTACTTTCCGGCGAAACGGTCAATGTCGCGATCCGTAACGGCAATGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAA", + "dna_sequence_length": 816, + "functions": [ + "glyoxylate-inducible transcriptional repressor of all and gcl operons" + ], + "id": "CDS_498", + "location": [ + [ + "NC_000913", + 533011, + "+", + 816 + ] + ], + "md5": "79ee68ddde63d51749874133cdaba4bc", + "parent_gene": "", + "protein_md5": "1d46f1a2f2ddb83eab40ce091ccca85a", + "protein_translation": "MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001754" + ], + [ + "gene_synonym", + "ECK0500" + ], + [ + "gene_synonym", + "EcoGene:EG11583" + ], + [ + "gene_synonym", + "GI:16128491" + ], + [ + "gene_synonym", + "GeneID:945394" + ], + [ + "gene_synonym", + "JW0495" + ], + [ + "gene_synonym", + "NP_415040.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEP7" + ], + [ + "gene_synonym", + "b0507" + ], + [ + "gene_synonym", + "gcl" + ] + ], + "dna_sequence": "ATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATGTGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCGCGCAACGGCAGGGAATATCGGCGTATGTCTGGGGACTTCCGGTCCTGCGGGCACGGACATGATCACCGCGCTCTATTCCGCTTCTGCTGATTCCATTCCTATTCTGTGCATTACCGGCCAGGCACCGCGCGCCCGTCTGCATAAAGAAGATTTTCAGGCCGTAGATATTGAAGCAATTGCTAAACCGGTCAGCAAAATGGCGGTTACAGTTCGTGAAGCGGCGCTGGTGCCTCGCGTGCTGCAACAGGCATTTCACCTGATGCGTTCTGGTCGTCCGGGTCCGGTACTGGTGGATTTACCGTTCGACGTTCAGGTTGCGGAAATCGAGTTTGATCCTGACATGTACGAACCGCTGCCGGTCTACAAACCTGCTGCCAGCCGTATGCAGATCGAAAAAGCTGTAGAAATGTTAATCCAGGCCGAACGTCCGGTGATTGTTGCCGGGGGCGGGGTAATTAATGCTGACGCAGCTGCACTGTTACAACAGTTTGCTGAACTGACCAGCGTTCCGGTGATCCCAACGCTAATGGGCTGGGGCTGTATCCCGGACGATCATGAACTGATGGCCGGGATGGTGGGTCTGCAAACCGCGCATCGTTACGGTAACGCAACGCTGCTGGCGTCTGACATGGTGTTTGGTATCGGTAACCGTTTTGCTAACCGTCATACCGGCTCGGTAGAGAAATACACCGAAGGGCGCAAAATCGTTCATATTGATATTGAGCCGACGCAAATTGGTCGCGTGCTGTGTCCGGATCTCGGTATTGTCTCTGATGCTAAAGCGGCGCTGACACTGCTGGTTGAAGTGGCGCAGGAGATGCAAAAAGCGGGTCGTCTGCCGTGTCGTAAAGAATGGGTCGCCGACTGCCAGCAGCGTAAACGCACTTTGCTGCGCAAAACCCACTTCGACAACGTGCCGGTGAAACCGCAGCGCGTGTATGAAGAGATGAACAAAGCCTTTGGTCGCGATGTTTGTTATGTCACCACCATTGGTCTGTCACAAATCGCTGCGGCACAAATGCTGCATGTCTTTAAAGACCGCCACTGGATCAACTGTGGTCAGGCTGGTCCGTTAGGCTGGACGATTCCGGCTGCGCTAGGGGTTTGTGCCGCTGATCCGAAACGCAATGTGGTGGCGATTTCTGGCGACTTTGACTTCCAGTTCCTGATTGAAGAGTTAGCTGTTGGCGCGCAGTTCAACATTCCGTACATCCATGTGCTGGTCAACAACGCTTATCTGGGGCTGATTCGTCAGTCACAACGCGCTTTTGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCGGACGCACCGACTGAAACCTGCTTCATGCACTATGAATAA", + "dna_sequence_length": 1782, + "functions": [ + "glyoxylate carboligase" + ], + "id": "CDS_499", + "location": [ + [ + "NC_000913", + 533916, + "+", + 1782 + ] + ], + "md5": "aa5fc3c2fe1ade23738b679c2f08a04b", + "parent_gene": "", + "protein_md5": "961db20d98ade1633c6020c9993a76f5", + "protein_translation": "MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE", + "protein_translation_length": 593, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001756" + ], + [ + "gene_synonym", + "ECK0501" + ], + [ + "gene_synonym", + "EcoGene:EG11584" + ], + [ + "gene_synonym", + "GI:16128492" + ], + [ + "gene_synonym", + "GeneID:946186" + ], + [ + "gene_synonym", + "JW0496" + ], + [ + "gene_synonym", + "NP_415041.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30147" + ], + [ + "gene_synonym", + "b0508" + ], + [ + "gene_synonym", + "gip" + ], + [ + "gene_synonym", + "hyi" + ], + [ + "gene_synonym", + "ybbG" + ] + ], + "dna_sequence": "ATGTTACGTTTCTCTGCTAATTTATCGATGTTATTTGGAGAATATGATTTTCTCGCCCGTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACTGGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACCATTTTGATATTCCTGGTTTCCATCTCACCGGAACTCGGCAGGCGCTGAAATTGATTGATGATGTTGGTTGCTGCAATTTGAAAATTCAGTATGACATTTATCATATGCAGCGGATGGAAGGTGAATTAACCAACACCATGACTCAGTGGGCTGATAAAATTGGTCACCTGCAAATTGCCGATAATCCGCATCGCGGCGAACCGGGAACCGGAGAAATTAATTATGATTATCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAA", + "dna_sequence_length": 777, + "functions": [ + "hydroxypyruvate isomerase" + ], + "id": "CDS_500", + "location": [ + [ + "NC_000913", + 535710, + "+", + 777 + ] + ], + "md5": "db2dd2f7bff22fd7d0ddab6187d9761b", + "parent_gene": "", + "protein_md5": "1ae37ec6ee6c190f80e1e757b3e7fe0f", + "protein_translation": "MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGEINYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001759" + ], + [ + "gene_synonym", + "ECK0502" + ], + [ + "gene_synonym", + "EcoGene:EG13265" + ], + [ + "gene_synonym", + "GI:16128493" + ], + [ + "gene_synonym", + "GeneID:945146" + ], + [ + "gene_synonym", + "JW0497" + ], + [ + "gene_synonym", + "NP_415042.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77161" + ], + [ + "gene_synonym", + "b0509" + ], + [ + "gene_synonym", + "glxB1" + ], + [ + "gene_synonym", + "glxR" + ], + [ + "gene_synonym", + "ybbQ" + ] + ], + "dna_sequence": "ATGAAACTGGGATTTATTGGCTTAGGCATTATGGGTACACCGATGGCCATTAATCTGGCGCGTGCCGGTCATCAATTACATGTCACGACCATTGGACCGGTTGCTGATGAATTACTGTCACTGGGTGCCGTCAGTGTTGAAACTGCTCGCCAGGTAACGGAAGCATCGGACATCATTTTTATTATGGTGCCGGACACACCTCAGGTTGAAGAAGTTCTGTTCGGTGAAAATGGTTGTACCAAAGCCTCGCTGAAGGGCAAAACCATTGTTGATATGAGCTCCATTTCCCCGATTGAAACTAAGCGTTTCGCTCGTCAGGTGAATGAACTGGGCGGCGATTATCTCGATGCGCCAGTCTCCGGCGGTGAAATCGGTGCGCGTGAAGGGACGTTGTCGATTATGGTTGGCGGTGATGAAGCGGTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCGATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTGCTATTTGCTTCAAAAGCCGGTGCGGACCCGGTACGTGTGCGCCAGGCGCTGATGGGCGGCTTTGCTTCCTCACGTATTCTGGAAGTTCATGGCGAGCGTATGATTAAACGCACCTTTAATCCGGGCTTCAAAATCGCTCTGCACCAGAAAGATCTCAACCTGGCACTGCAAAGTGCGAAAGCACTTGCGCTGAACCTGCCAAACACTGCGACCTGCCAGGAGTTATTTAATACCTGTGCGGCAAACGGTGGCAGCCAGTTGGATCACTCTGCGTTAGTGCAGGCGCTGGAATTAATGGCTAACCATAAACTGGCCTGA", + "dna_sequence_length": 879, + "functions": [ + "tartronate semialdehyde reductase, NADH-dependent" + ], + "id": "CDS_501", + "location": [ + [ + "NC_000913", + 536586, + "+", + 879 + ] + ], + "md5": "a7605e2641eb1122eaad63edb5077961", + "parent_gene": "", + "protein_md5": "1789572b041dafe54ac987870d68db11", + "protein_translation": "MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001764" + ], + [ + "gene_synonym", + "ECK0504" + ], + [ + "gene_synonym", + "EcoGene:EG13618" + ], + [ + "gene_synonym", + "GI:90111144" + ], + [ + "gene_synonym", + "GeneID:945138" + ], + [ + "gene_synonym", + "JW0499" + ], + [ + "gene_synonym", + "NP_415044.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75712" + ], + [ + "gene_synonym", + "allP" + ], + [ + "gene_synonym", + "b0511" + ], + [ + "gene_synonym", + "glxB2" + ], + [ + "gene_synonym", + "ybbW" + ] + ], + "dna_sequence": "ATGGAACATCAGAGAAAACTATTCCAGCAACGCGGCTATAGCGAAGATCTATTGCCGAAAACGCAAAGCCAGCGGACCTGGAAAACATTTAACTATTTTACCTTATGGATGGGTTCGGTTCATAACGTTCCCAATTATGTGATGGTCGGCGGCTTTTTTATTCTCGGCTTGTCTACCTTTAGTATTATGCTGGCAATTATCCTCAGCGCCTTTTTCATTGCCGCGGTAATGGTATTAAACGGTGCTGCGGGCAGTAAATACGGTGTGCCTTTTGCCATGATCCTGCGTGCTTCTTACGGTGTACGTGGTGCACTGTTTCCCGGATTATTAAGGGGCGGAATTGCCGCCATCATGTGGTTTGGTTTGCAATGTTACGCGGGGTCACTGGCCTGCTTGATTCTGATTGGCAAAATCTGGCCGGGATTTTTAACTCTCGGTGGTGATTTCACTCTGTTAGGCCTTTCTCTACCGGGCTTAATTACTTTCTTAATCTTCTGGCTGGTCAACGTTGGTATAGGTTTTGGCGGTGGCAAAGTTTTAAATAAATTCACTGCCATTCTTAACCCGTGCATCTATATCGTTTTCGGCGGTATGGCGATTTGGGCGATTTCACTGGTCGGGATCGGTCCAATCTTTGACTACATTCCGAGCGGTATTCAGAAAGCAGAAAACGGTGGCTTCCTGTTCCTGGTGGTGATTAACGCGGTAGTTGCGGTCTGGGCGGCACCGGCGGTGAGCGCATCCGACTTTACGCAAAACGCCCACTCGTTTCGTGAGCAGGCGCTGGGGCAAACGCTGGGTTTAGTTGTGGCCTATATTCTGTTTGCGGTCGCCGGGGTATGTATTATTGCCGGAGCCAGTATTCACTACGGCGCTGATACCTGGAACGTGCTGGATATTGTTCAGCGTTGGGACAGCCTGTTCGCCTCGTTCTTTGCGGTACTGGTTATTCTGATGACAACTATCTCCACTAACGCGACCGGTAATATTATTCCAGCCGGTTATCAGATTGCCGCCATTGCACCGACAAAACTGACCTATAAAAACGGCGTACTGATTGCCAGTATTATCAGCTTGCTGATCTGCCCGTGGAAATTAATGGAAAATCAGGACAGCATTTATCTTTTCCTCGATATTATCGGCGGAATGCTTGGTCCGGTAATTGGTGTCATGATGGCGCATTATTTTGTGGTGATGCGCGGACAAATTAATCTTGATGAACTGTATACCGCACCTGGCGATTATAAATATTACGATAACGGTTTTAACCTCACTGCGTTTTCAGTAACTCTGGTGGCCGTTATTTTATCTCTTGGCGGTAAGTTTATTCACTTTATGGAACCGTTATCGCGTGTTTCATGGTTTGTCGGCGTCATCGTCGCCTTTGCGGCCTACGCCTTATTAAAGAAACGTACAACAGCAGAAAAAACAGGAGAGCAAAAAACCATAGGTTAA", + "dna_sequence_length": 1455, + "functions": [ + "putative allantoin transporter" + ], + "id": "CDS_502", + "location": [ + [ + "NC_000913", + 537633, + "+", + 1455 + ] + ], + "md5": "a8a83462509c84323433c4e098c0806e", + "parent_gene": "", + "protein_md5": "fd06856f24fd292f2cf4369261edaacf", + "protein_translation": "MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG", + "protein_translation_length": 484, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001768" + ], + [ + "gene_synonym", + "ECK0505" + ], + [ + "gene_synonym", + "EcoGene:EG13619" + ], + [ + "gene_synonym", + "GI:16128496" + ], + [ + "gene_synonym", + "GeneID:945134" + ], + [ + "gene_synonym", + "JW0500" + ], + [ + "gene_synonym", + "NP_415045.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77671" + ], + [ + "gene_synonym", + "allB" + ], + [ + "gene_synonym", + "b0512" + ], + [ + "gene_synonym", + "glxB3" + ], + [ + "gene_synonym", + "ybbX" + ] + ], + "dna_sequence": "ATGTCTTTTGATTTAATCATTAAAAACGGCACCGTTATTTTAGAAAACGAAGCTCGCGTTGTAGATATCGCCGTTAAAGGCGGAAAAATTGCTGCTATCGGTCAGGATCTGGGCGATGCAAAAGAAGTTATGGATGCGTCTGGTCTGGTGGTTTCGCCGGGCATGGTTGATGCGCACACCCATATTTCTGAACCGGGTCGTAGCCACTGGGAAGGTTATGAAACCGGTACTCGCGCAGCGGCAAAAGGTGGTATCACCACCATGATCGAAATGCCGCTCAACCAGCTGCCTGCAACGGTTGACCGCGCTTCAATTGAACTGAAGTTCGATGCCGCTAAAGGCAAGCTGACTATTGATGCGGCACAACTCGGTGGCCTGGTGTCTTACAACATCGACCGTCTGCATGAGCTGGATGAAGTGGGCGTTGTCGGCTTCAAATGCTTCGTTGCGACCTGTGGCGATCGCGGTATCGACAACGACTTCCGTGATGTAAACGACTGGCAGTTCTTCAAAGGTGCGCAGAAGCTGGGCGAACTGGGTCAGCCGGTGCTGGTGCACTGCGAAAACGCGCTGATTTGTGACGAACTGGGCGAAGAAGCGAAGCGTGAAGGTCGCGTAACCGCTCATGACTATGTGGCTTCGCGTCCGGTATTTACCGAAGTGGAAGCAATTCGCCGCGTACTGTATCTGGCGAAAGTTGCTGGTTGCCGTCTGCACGTTTGCCACGTCAGCAGCCCGGAAGGTGTTGAGGAAGTGACTCGTGCACGTCAGGAAGGTCAGGACGTTACTTGTGAATCCTGCCCGCATTACTTTGTACTGGATACCGATCAGTTCGAAGAAATCGGTACTCTGGCGAAGTGTTCACCGCCGATCCGCGATCTGGAAAACCAGAAAGGCATGTGGGAAAAACTGTTTAACGGTGAAATCGACTGCCTGGTTTCCGACCACTCTCCATGCCCGCCGGAAATGAAAGCCGGTAACATCATGAAAGCATGGGGCGGTATCGCCGGTCTGCAAAGCTGCATGGACGTGATGTTCGATGAAGCGGTACAGAAACGCGGTATGTCTCTGCCAATGTTCGGCAAATTAATGGCGACTAACGCAGCAGATATTTTCGGTCTGCAGCAAAAAGGCCGTATCGCCCCAGGAAAAGATGCCGACTTCGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAA", + "dna_sequence_length": 1362, + "functions": [ + "allantoinase" + ], + "id": "CDS_503", + "location": [ + [ + "NC_000913", + 539147, + "+", + 1362 + ] + ], + "md5": "6269ba8696d3cce0c36e5a8c573335b8", + "parent_gene": "", + "protein_md5": "843c3cd9ef110a3fcc545286cabd4b1b", + "protein_translation": "MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001771" + ], + [ + "gene_synonym", + "ECK0506" + ], + [ + "gene_synonym", + "EcoGene:EG13620" + ], + [ + "gene_synonym", + "GI:90111145" + ], + [ + "gene_synonym", + "GeneID:945131" + ], + [ + "gene_synonym", + "JW0501" + ], + [ + "gene_synonym", + "NP_415046.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77328" + ], + [ + "gene_synonym", + "b0513" + ], + [ + "gene_synonym", + "glxB4" + ], + [ + "gene_synonym", + "ybbY" + ] + ], + "dna_sequence": "ATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCAACGATATCGCCACCAGCCTGGCAGTGGGGATTGCACTCTCCGGCGTGCTGACGATGTTGATTGGTTTTAGCGGATTAGGCCATCGCCTGGCACGGTTATTTACGCCGTCGGTGATGGTCTTGTTTATGTTGATGCTGGGCGCGCAGCTGACCACTATCTTTTTCAAAGGTATGCTCGGGCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAGTTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTCGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGTGATTACAGGTCTGGTAAATATCAGCAATACCTACGGTGCGATTCGGGGCACGGATGTTTTTTATCCGCAGCAGGGCGCAGGGAATACGCGTTATCGTCGTAGCTTTGTGGCGACCGGATTTATGACGCTGATAACCGTACCGCTGGCGGTAATTCCATTTTCACCGTTTGTTTCATCCATTGGTTTATTAACCCAGACTGGCGATTACACGCGGCGTTCGTTTATTTATGGCAGCGTTATTTGCCTGCTGGTGGCGCTGGTTCCTGCACTCACGCGACTGTTTTGCAGTATCCCTTTACCCGTGAGTAGTGCGGTCATGCTGGTTTCTTATCTGCCTTTACTCTTTTCCGCGCTGGTGTTTAGCCAGCAAATAACGTTTACCGCTCGCAATATTTATCGACTCGCATTGCCGTTATTTGTCGGCATATTTTTAATGGCATTACCGCCTGTGTATCTGCAAGACCTTCCATTAACGCTTCGTCCTCTGCTCAGTAACGGCTTATTGGTCGGGATTTTACTGGCTGTTCTTATGGATAACCTTATTCCGTGGGAACGCATCGAATAA", + "dna_sequence_length": 1302, + "functions": [ + "putative uracil/xanthine transporter" + ], + "id": "CDS_504", + "location": [ + [ + "NC_000913", + 540565, + "+", + 1302 + ] + ], + "md5": "294058b126abd4498ca5ee8f46057b1a", + "parent_gene": "", + "protein_md5": "f5d8e143daa551145c79cb12dc0813be", + "protein_translation": "MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE", + "protein_translation_length": 433, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001773" + ], + [ + "gene_synonym", + "ECK0507" + ], + [ + "gene_synonym", + "EcoGene:EG13621" + ], + [ + "gene_synonym", + "GI:16128498" + ], + [ + "gene_synonym", + "GeneID:945129" + ], + [ + "gene_synonym", + "JW0502" + ], + [ + "gene_synonym", + "NP_415047.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77364" + ], + [ + "gene_synonym", + "b0514" + ], + [ + "gene_synonym", + "glxB5" + ], + [ + "gene_synonym", + "glxK" + ], + [ + "gene_synonym", + "ybbZ" + ] + ], + "dna_sequence": "ATGAAGATTGTCATTGCGCCAGACTCTTTTAAAGAGAGCTTAAGTGCAGAAAAATGTTGTCAGGCAATTAAAGCCGGGTTTTCGACCCTCTTTCCCGATGCGAACTATATCTGTTTGCCGATAGCGGATGGCGGCGAAGGGACGGTGGATGCGATGGTCGCCGCGACGGGCGGCAACATCGTGACGCTTGAAGTCTGCGGGCCGATGGGCGAAAAAGTGAATGCTTTTTATGGCCTTACCGGCGACGGGAAAACGGCGGTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTATGGGCATGGCGCAGGCGCTCGGTGTGCGTTTCCTTGATGCCGACGGTCAGGCGCTGGCGGCAAACGGTGGTAATTTAGCGCGCGTGGCAAGCATTGAGATGGATGAATGCGATCCGCGTCTGGCGAATTGCCATATTGAAGTAGCATGTGACGTTGATAACCCGCTGGTAGGGGCACGCGGCGCGGCGGCGGTGTTTGGCCCGCAAAAAGGGGCAACGCCGGAGATGGTCGAAGAACTTGAACAGGGGCTGCAAAATTACGCCCGTGTTTTACAACAGCAAACTGAAATTAATGTCTGCCAGATGGCGGGCGGCGGCGCTGCGGGCGGTATGGGTATTGCGGCGGCGGTATTTCTCAATGCGGATATTAAACCGGGCATTGAAATTGTGTTGAATGCGGTCAATCTTGCGCAGGCAGTGCAGGGCGCAGCACTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCAGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCATTTTGCCTCGTCTGGCACCTTTAGCCGAAGTGCTCGCCAGCGGTGAAACCAATCTCTTCAACAGCGCGCGAAATATTGCCTGCGCCATTAAAATAGGTCAGGGAATTAAAAACTAA", + "dna_sequence_length": 1146, + "functions": [ + "glycerate kinase II" + ], + "id": "CDS_505", + "location": [ + [ + "NC_000913", + 541888, + "+", + 1146 + ] + ], + "md5": "eb5f7b346ce1f93a8647bc0fe081275f", + "parent_gene": "", + "protein_md5": "ca9ea4441a92c22b915ae0115633eb43", + "protein_translation": "MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001775" + ], + [ + "gene_synonym", + "ECK0508" + ], + [ + "gene_synonym", + "EcoGene:EG13622" + ], + [ + "gene_synonym", + "GI:16128499" + ], + [ + "gene_synonym", + "GeneID:945149" + ], + [ + "gene_synonym", + "JW0503" + ], + [ + "gene_synonym", + "NP_415048.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75713" + ], + [ + "gene_synonym", + "allE" + ], + [ + "gene_synonym", + "b0515" + ], + [ + "gene_synonym", + "glxB6" + ], + [ + "gene_synonym", + "ughY" + ], + [ + "gene_synonym", + "ylbA" + ] + ], + "dna_sequence": "ATGGGATATTTAAATAACGTCACCGGTTACCGCGAAGATTTACTGGCTAACCGTGCGATTGTTAAACACGGTAATTTCGCACTGTTAACCCCGGATGGTCTGGTAAAAAATATTATTCCGGGCTTTGAAAATTGTGACGCGACAATCCTCTCCACGCCAAAGCTGGGTGCCTCTTTTGTTGATTATCTGGTCACACTGCATCAAAACGGTGGCAACCAACAGGGCTTCGGTGGCGAAGGCATTGAAACGTTCCTGTATGTGATCTCTGGAAATATCACTGCCAAAGCCGAAGGCAAAACATTTGCCTTAAGCGAAGGTGGCTATCTTTATTGCCCGCCAGGCTCCTTAATGACGTTTGTTAACGCCCAGGCCGAAGACAGCCAAATCTTTTTATATAAGCGCCGCTATGTTCCGGTAGAAGGCTATGCACCGTGGCTGGTTTCTGGCAATGCCAGCGAACTGGAACGCATTCATTATGAAGGCATGGACGATGTTATTCTGCTGGATTTTCTGCCCAAAGAGTTAGGTTTTGATATGAACATGCATATCCTCTCTTTTGCACCAGGTGCCAGCCACGGTTATATCGAAACACACGTTCAGGAACACGGTGCCTATATTCTTTCCGGTCAGGGGGTTTATAACCTCGACAATAACTGGATCCCGGTGAAAAAAGGCGATTACATCTTTATGGGCGCTTATTCTTTACAGGCTGGTTATGGTGTAGGGCGTGGTGAAGCGTTCAGCTATATTTACTCGAAAGATTGTAACCGCGACGTAGAGATTTAA", + "dna_sequence_length": 786, + "functions": [ + "S-ureidoglycine aminohydrolase" + ], + "id": "CDS_506", + "location": [ + [ + "NC_000913", + 544046, + "-", + 786 + ] + ], + "md5": "a9e5cd4ebf3e938b8419ca1eb159114b", + "parent_gene": "", + "protein_md5": "9653e1d8690b5d25bdda3e247f40cca6", + "protein_translation": "MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001777" + ], + [ + "gene_synonym", + "ECK0509" + ], + [ + "gene_synonym", + "EcoGene:EG13623" + ], + [ + "gene_synonym", + "GI:16128500" + ], + [ + "gene_synonym", + "GeneID:945150" + ], + [ + "gene_synonym", + "JW0504" + ], + [ + "gene_synonym", + "NP_415049.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77425" + ], + [ + "gene_synonym", + "allC" + ], + [ + "gene_synonym", + "b0516" + ], + [ + "gene_synonym", + "glxB7" + ], + [ + "gene_synonym", + "ylbB" + ] + ], + "dna_sequence": "ATGATTACACATTTCCGTCAAGCTATAGAAGAAACGCTGCCCTGGCTTTCCTCTTTTGGCGCTGACCCAGCGGGTGGGATGACCCGTTTACTTTATTCGCCGGAATGGCTGGAAACCCAGCAGCAATTTAAAAAAAGAATGGCAGCAAGCGGGCTGGAAACACGTTTCGATGAAGTGGGGAATTTATACGGTCGCCTGAATGGCACCGAATATCCACAGGAAGTGGTTCTGAGCGGTTCGCATATCGATACCGTGGTTAACGGCGGTAACCTTGACGGGCAATTCGGCGCGCTGGCGGCGTGGCTGGCAATTGACTGGCTGAAAACGCAATACGGCGCGCCGCTACGTACGGTCGAAGTGGTGGCGATGGCAGAAGAAGAAGGCAGCCGCTTCCCGTATGTCTTCTGGGGCAGTAAAAATATTTTTGGGCTGGCGAATCCTGACGACGTGCGGAATATCTGTGATGCCAAAGGAAATAGTTTTGTCGATGCGATGAAGGCTTGCGGATTTACTCTTCCGAACGCCCCACTAACTCCGCGTCAGGATATTAAAGCCTTTGTTGAACTGCATATTGAACAGGGCTGTGTGCTGGAAAGTAATGGGCAATCAATTGGCGTGGTGAATGCAATTGTCGGGCAGCGTCGTTATACGGTAACGCTGAACGGCGAATCAAACCATGCAGGCACCACGCCGATGGGTTATCGTCGTGATACAGTTTACGCTTTCAGTCGCATTTGCCATCAGTCGGTCGAAAAAGCGAAAAGGATGGGCGATCCGCTGGTTCTGACCTTTGGCAAAGTAGAGCCGCGCCCGAATACGGTAAATGTGGTGCCGGGTAAAACCACGTTCACCATTGATTGTCGTCATACCGACGCTGCCGTGCTGCGCGATTTCACCCAACAGTTAGAAAACGACATGCGGGCGATTTGCGATGAAATGGACATTGGTATTGATATCGATTTATGGATGGACGAAGAACCCGTGCCGATGAATAAGGAGCTGGTCGCCACCCTGACAGAATTGTGTGAAAGAGAAAAACTGAATTACCGGGTGATGCACAGTGGTGCCGGGCACGACGCGCAAATTTTCGCGCCTCGCGTACCAACCTGCATGATTTTTATCCCCAGCATCAACGGGATCAGCCATAACCCGGCGGAACGCACCAATATTACCGACCTTGCCGAAGGGGTCAAAACGTTGGCACTCATGCTTTATCAACTTGCCTGGCAGAAATAA", + "dna_sequence_length": 1236, + "functions": [ + "allantoate amidohydrolase" + ], + "id": "CDS_507", + "location": [ + [ + "NC_000913", + 545292, + "-", + 1236 + ] + ], + "md5": "3556d03e8a9be25f205e650c6585ba17", + "parent_gene": "", + "protein_md5": "ea0d6bc313bf389e37eaee4a2e55143a", + "protein_translation": "MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK", + "protein_translation_length": 411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001780" + ], + [ + "gene_synonym", + "ECK0510" + ], + [ + "gene_synonym", + "EcoGene:EG13624" + ], + [ + "gene_synonym", + "GI:16128501" + ], + [ + "gene_synonym", + "GeneID:948342" + ], + [ + "gene_synonym", + "JW0505" + ], + [ + "gene_synonym", + "NP_415050.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77555" + ], + [ + "gene_synonym", + "allD" + ], + [ + "gene_synonym", + "b0517" + ], + [ + "gene_synonym", + "glxB8" + ], + [ + "gene_synonym", + "ylbC" + ] + ], + "dna_sequence": "ATGAAAATCAGTCGGGAAACACTCCACCAGCTAATTGAGAATAAACTCTGCCAGGCTGGGTTAAAACGTGAGCACGCTGCAACCGTGGCTGAAGTATTGGTTTACGCCGATGCCAGAGGGATCCACTCTCATGGCGCGGTGCGCGTGGAATACTACGCGGAACGCATTTCAAAAGGCGGCACCAACCGCGAACCGGAGTTTCGTCTTGAGGAAACCGGGCCGTGCTCGGCAATTTTACATGCCGACAATGCCGCCGGACAGGTCGCGGCGAAAATGGGTATGGAACATGCCATCAAAACCGCCCAGCAAAATGGCGTTGCGGTGGTCGGTATCAGCCGGATGGGTCACAGCGGCGCAATCTCTTATTTTGTGCAGCAGGCAGCCCGCGCCGGATTCATTGGCATTTCGATGTGCCAGTCCGATCCAATGGTGGTGCCGTTTGGCGGCGCGGAAATTTACTACGGTACTAACCCCCTGGCCTTTGCCGCGCCGGGAGAAGGCGACGAGATCCTTACCTTTGATATGGCGACTACCGTACAGGCATGGGGAAAAGTGCTCGACGCCCGCTCGCGTAATATGTCTATCCCGGATACCTGGGCGGTCGATAAAAACGGTGTACCAACAACCGATCCGTTCGCGGTACATGCTCTGCTCCCCGCCGCCGGGCCAAAAGGGTATGGCCTGATGATGATGATTGACGTCCTCTCAGGCGTCTTACTCGGCTTACCGTTCGGGCGACAGGTTAGTTCGATGTATGACGATTTACACGCAGGGCGTAATTTGGGGCAATTACATATAGTTATTAATCCGAACTTTTTCTCCTCCAGCGAATTATTCCGTCAACATCTTAGCCAGACCATGCGCGAATTAAATGCCATTACCCCCGCGCCCGGTTTTAATCAGGTTTATTATCCCGGACAGGATCAGGATATTAAACAACGCAAAGCCGCCGTCGAAGGCATCGAAATTGTTGATGATATTTACCAGTATTTAATTTCCGACGCGCTTTATAACACGTCATACGAAACGAAAAATCCCTTTGCGCAATAA", + "dna_sequence_length": 1050, + "functions": [ + "ureidoglycolate dehydrogenase" + ], + "id": "CDS_508", + "location": [ + [ + "NC_000913", + 546363, + "-", + 1050 + ] + ], + "md5": "4a4903add4dfafb449539fe582f11c59", + "parent_gene": "", + "protein_md5": "86e583f5cded803cc7db8e132e52dfa1", + "protein_translation": "MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001784" + ], + [ + "gene_synonym", + "ECK0511" + ], + [ + "gene_synonym", + "EcoGene:EG13399" + ], + [ + "gene_synonym", + "GI:16128502" + ], + [ + "gene_synonym", + "GeneID:946298" + ], + [ + "gene_synonym", + "JW0506" + ], + [ + "gene_synonym", + "NP_415051.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47208" + ], + [ + "gene_synonym", + "b0518" + ], + [ + "gene_synonym", + "fdrA" + ], + [ + "gene_synonym", + "ylbD" + ] + ], + "dna_sequence": "ATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTGGGACAGTGCCTGTCAGAAATTACCCGATGCCAATCTGGCGCTGATTTCAGTGGCTGGCGAGTATGCGGCGGAGCTGGCAAACCAGGCGCTGGATCGCAACCTCAACGTGATGATGTTCTCCGATAACGTCACGCTGGAAGATGAAATCCAACTTAAAACCCGCGCGCGGGAAAAAGGCTTGCTGGTGATGGGGCCGGACTGCGGTACGTCGATGATTGCCGGCACACCGCTGGCTTTTGCTAACGTGATGCCGGAAGGCAATATTGGCGTCATTGGCGCTTCCGGTACCGGGATTCAGGAGCTGTGTTCGCAGATTGCGCTGGCAGGGGAGGGAATTACTCACGCGATTGGCCTTGGCGGGCGCGACCTCAGCCGTGAAGTGGGCGGCATCAGTGCGCTAACAGCGCTGGAAATGCTCAGTGCAGACGAGAAAAGCGAAGTGCTGGCATTTGTTTCAAAACCACCTGCCGAAGCTGTGCGTCTGAAAATTGTTAATGCCATGAAAGCAACCGGCAAACCGACGGTGGCGCTGTTTTTAGGTTATACCCCGGCGGTGGCCCGCGACGAGAATGTCTGGTTTGCCTCCTCGCTGGATGAGGCCGCACGCCTGGCTTGCCTGCTTTCACGCGTCACGGCGCGACGTAACGCAATAGCGCCTGTCAGCAGCGGATTTATTTGCGGTTTGTATACCGGCGGTACGCTGGCTGCCGAAGCGGCGGGATTACTTGCCGGACACCTTGGCGTGGAAGCCGACGATACCCATCAACATGGCATGATGCTGGACGCCGATAGCCACCAGATTATTGACCTCGGCGATGATTTCTACACCGTCGGGCGTCCCCATCCGATGATCGACCCAACCTTACGCAACCAGTTAATTGCCGATCTCGGCGCTAAACCGCAAGTGCGCGTGTTGCTGCTTGATGTCGTGATTGGCTTCGGTGCGACCGCCGATCCTGCCGCCTCGCTGGTGAGCGCCTGGCAAAAAGCCTGTGCCGCGCGTTTAGATAATCAACCACTGTATGCCATTGCCACGGTGACAGGCACTGAACGTGACCCGCAATGCCGCTCGCAGCAAATCGCCACGCTGGAAGATGCGGGGATTGCGGTCGTGAGTTCGCTACCGGAAGCCACCTTGCTGGCGGCAGCGTTAATTCATCCGCTCTCGCCTGCCGCACAGCAACACACACCGTCATTACTGGAAAACGTCGCCGTGATTAACATCGGATTACGCAGCTTTGCGCTGGAGCTACAAAGCGCCAGCAAACCGGTTGTGCATTACCAATGGTCGCCAGTCGCCGGTGGCAATAAAAAACTGGCTCGTTTATTAGAACGTTTGCAATAA", + "dna_sequence_length": 1668, + "functions": [ + "putative NAD(P)-binding acyl-CoA synthetase" + ], + "id": "CDS_509", + "location": [ + [ + "NC_000913", + 546680, + "+", + 1668 + ] + ], + "md5": "8e26a98cbe3c3e0a22b9586ec3689906", + "parent_gene": "", + "protein_md5": "158c8cf7e75062826c115ddb3eb90f36", + "protein_translation": "MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ", + "protein_translation_length": 555, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001787" + ], + [ + "gene_synonym", + "ASAP:ABE-0285028" + ], + [ + "gene_synonym", + "ASAP:ABE-0285105" + ], + [ + "gene_synonym", + "ECK0512" + ], + [ + "gene_synonym", + "EcoGene:EG13398" + ], + [ + "gene_synonym", + "GI:635341461" + ], + [ + "gene_synonym", + "GeneID:4056025" + ], + [ + "gene_synonym", + "JW0507" + ], + [ + "gene_synonym", + "JW0508" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77129" + ], + [ + "gene_synonym", + "YP_009029994.1" + ], + [ + "gene_synonym", + "b4572" + ], + [ + "gene_synonym", + "ylbE" + ] + ], + "dna_sequence": "ATGTTTACATCAGTGGCGCAAGCCAATGCTGCGGTTATCGAACAAATTCGTCGCGCTCGTCCACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGGCCGCCAATGCGCTGGCAGGAGATGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGAGCAGGGGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTGGTGGTTGAGAACGTGACCGACGGCAACCGGGCGTACTGCAACCTCAACGAAGGTATCGGCAAAGTGATGCGTTTTGGCGCTTACGGCGAAGATGTCCTGACTCGCCATCGCTGGATGCGCGATGTGTTAATGCCAGTATTAAGCGCGGCGCTGGGGCGCATGGAGCGCGGTATCGATCTCACGGCGATGATGGCGCAGGGCATTACGATGGGCGATGAGTTCCATCAACGCAATATTGCTTCCTCTGCACTGTTAATGCGTGCGCTGGCCCCACAAATTGCTCGCCTCGATCATGATAAACAGCACATCGCCGAAGTGATGGATTTCCTCAGCGTGACCGATCAGTTCTTCCTCAACCTCGCGATGGCTTACTGCAAGGCGGCGATGGATGCTGGCGCGATGATCCGCGCAGGCAGCATCGTCACGGCAATGACCCGCAACGGCAATATGTTCGGGATTCGGGTAAGCGGGCTGGGCGAACGCTGGTTTACTGCGCCTGTAAACACTCCGCAAGGTCTGTTTTTCACCGGCTTCTCGCAGGAGCAGGCGAACCCGGATATGGGCGATAGCGCGATTACCGAAACCTTTGGTATCGGAGGTGCGGCAATGATCGCAGCGCCTGGCGTAACGCGCTTTGTCGGTGCGGGTGGCATGGAAGCGGCAAGAGCGGTATCTGAAGAGATGGCGGAAATTTACCTTGAACGCAATATGCAGTTGCAGATCCCAAGCTGGGATTTTCAGGGCGCGTGCCTGGGGCTGGACATTCGTCGCGTGGTAGAAACCGGCATTACGCCACTCATCAATACCGGTATCGCCCATAAAGAGGCGGGGATCGGGCAGATTGGCGCAGGCACCGTGCGGGCACCGCTGGCGTGCTTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGA", + "dna_sequence_length": 1260, + "functions": [ + "NO-induced DUF1116 protein" + ], + "id": "CDS_510", + "location": [ + [ + "NC_000913", + 548357, + "+", + 1260 + ] + ], + "md5": "c508819dde25af560cbf3623abcc6161", + "parent_gene": "", + "protein_md5": "f7a4069376b8fbd2c3ca47edaf502f69", + "protein_translation": "MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001789" + ], + [ + "gene_synonym", + "ECK0513" + ], + [ + "gene_synonym", + "EcoGene:EG13626" + ], + [ + "gene_synonym", + "GI:16128504" + ], + [ + "gene_synonym", + "GeneID:945195" + ], + [ + "gene_synonym", + "JW0509" + ], + [ + "gene_synonym", + "NP_415053.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAS5" + ], + [ + "gene_synonym", + "b0520" + ], + [ + "gene_synonym", + "ylbF" + ] + ], + "dna_sequence": "ATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCACCGAATTATCGCCAGTCCTGGCGGTTAGCGGGAGTGTGGCGGCGGGCGATTAACCTGATGACGGAAAGCGGCGAACTGTTAACGTTGCATCGTCAGGGTAGTGGTTTCGGCCCCGGAGGATGGGTGCTTCGCCGTGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCGTTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCTGAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGAAACGTACCGCTGTTGCGATTGATTCGCTGCTGGCGCTGGGGCATACGTCAGGGGCAGATACGCTGCTGGGGTTCTGGCTTGGCCAACAATTATTACAAGGAAAACCATGA", + "dna_sequence_length": 816, + "functions": [ + "putative anaerobic allantoin catabolic oxamate carbamoyltransferase", + "DUF2877 family protein" + ], + "id": "CDS_511", + "location": [ + [ + "NC_000913", + 549627, + "+", + 816 + ] + ], + "md5": "44b8feda19fa3224570e993f2dfb2fbe", + "parent_gene": "", + "protein_md5": "24b3f9694278ddde3bb43f5ce379b36b", + "protein_translation": "MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001791" + ], + [ + "gene_synonym", + "ECK0514" + ], + [ + "gene_synonym", + "EcoGene:EG12384" + ], + [ + "gene_synonym", + "GI:16128505" + ], + [ + "gene_synonym", + "GeneID:944972" + ], + [ + "gene_synonym", + "JW0510" + ], + [ + "gene_synonym", + "NP_415054.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37306" + ], + [ + "gene_synonym", + "arcC" + ], + [ + "gene_synonym", + "b0521" + ], + [ + "gene_synonym", + "ybcF" + ] + ], + "dna_sequence": "ATGAAAACACTGGTTGTGGCTCTTGGGGGCAACGCCTTACTCCAGCGCGGTGAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGATGTGCTGGTTGCGGAAAGCCAGGGGATGATTGGCTATATGCTGGCGCAGAGTTTGAGCGCACAGCCGCAGATGCCGCCCGTGACGACGGTGCTGACGCGCATTGAGGTTTCGCCTGATGATCCGGCGTTTTTGCAGCCAGAGAAATTTATTGGTCCGGTTTATCAGCCAGAAGAACAAGAGGCACTGGAAGCGGCTTACGGCTGGCAGATGAAACGTGATGGTAAATATTTGCGCCGGGTGGTGGCGTCTCCGCAACCGCGTAAAATTCTCGACAGCGAAGCCATCGAGTTGTTGCTCAAAGAGGGGCATGTGGTGATTTGCAGTGGCGGCGGCGGTGTGCCTGTGACGGATGACGGAGCAGGGAGTGAAGCAGTGATTGATAAAGATCTCGCCGCTGCGTTGCTCGCCGAGCAGATTAATGCAGATGGACTGGTGATCCTCACCGATGCTGATGCGGTATATGAAAACTGGGGAACGCCGCAGCAACGTGCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAG", + "dna_sequence_length": 894, + "functions": [ + "putative carbonate kinase" + ], + "id": "CDS_512", + "location": [ + [ + "NC_000913", + 550439, + "+", + 894 + ] + ], + "md5": "e9950a3155d15c77c6d1e4edaf85447b", + "parent_gene": "", + "protein_md5": "be1b61a748a405cdb772bfd530b52d23", + "protein_translation": "MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPNVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001794" + ], + [ + "gene_synonym", + "ECK0515" + ], + [ + "gene_synonym", + "EcoGene:EG10796" + ], + [ + "gene_synonym", + "GI:16128506" + ], + [ + "gene_synonym", + "GeneID:945153" + ], + [ + "gene_synonym", + "JW0511" + ], + [ + "gene_synonym", + "NP_415055.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09029" + ], + [ + "gene_synonym", + "b0522" + ], + [ + "gene_synonym", + "purE2" + ], + [ + "gene_synonym", + "purK" + ] + ], + "dna_sequence": "ATGAAACAGGTTTGCGTCCTCGGTAACGGGCAGTTAGGCCGTATGCTGCGTCAGGCAGGCGAACCGTTAGGCATTGCTGTCTGGCCAGTCGGGCTGGACGCTGAACCGGCGGCGGTGCCTTTTCAACAAAGCGTGATTACCGCTGAGATAGAACGCTGGCCGGAAACCGCATTAACCCGCGAGCTGGCGCGCCATCCGGCCTTTGTGAACCGCGATGTGTTCCCGATTATTGCTGACCGTCTGACTCAGAAGCAGCTTTTCGATAAGCTCCACCTGCCGACTGCACCGTGGCAGTTACTTGCCGAACGCAGCGAGTGGCCTGCGGTGTTTGATCGTTTAGGTGAGCTGGCGATTGTTAAGCGTCGCACTGGTGGTTATGACGGTCGCGGTCAATGGCGTTTACGCGCAAATGAAACCGAACAGTTACCGGCAGAGTGTTACGGCGAATGTATTGTCGAGCAGGGCATTAACTTCTCTGGTGAAGTGTCGCTGGTTGGCGCGCGCGGCTTTGATGGCAGCACCGTGTTTTATCCGCTGACGCATAACCTGCATCAGGACGGTATTTTGCGCACCAGCGTCGCTTTTCCGCAGGCCAACGCACAGCAGCAGGCGCAAGCCGAAGAGATGCTGTCGGCGATTATGCAGGAGCTGGGCTATGTGGGCGTGATGGCGATGGAGTGTTTTGTCACCCCGCAAGGTCTGTTGATCAACGAACTGGCACCGCGTGTGCATAACAGCGGTCACTGGACACAAAACGGTGCCAGCATCAGCCAGTTTGAGCTGCATCTGCGGGCGATTACCGATCTGCCGTTACCGCAACCAGTGGTGAATAATCCGTCGGTGATGATCAATCTGATTGGTAGCGATGTGAATTATGACTGGCTGAAACTGCCGCTGGTGCATCTGCACTGGTACGACAAAGAAGTCCGTCCGGGGCGTAAAGTGGGGCATCTGAATTTGACCGACAGCGACACATCGCGTCTGACTGCGACGCTGGAAGCCTTAATCCCGCTGCTGCCGCCGGAATATGCCAGCGGCGTGATTTGGGCGCAGAGTAAGTTCGGTTAA", + "dna_sequence_length": 1068, + "functions": [ + "N5-carboxyaminoimidazole ribonucleotide synthase" + ], + "id": "CDS_513", + "location": [ + [ + "NC_000913", + 552594, + "-", + 1068 + ] + ], + "md5": "2800a9991679a9f6bbf4edd9831ade2c", + "parent_gene": "", + "protein_md5": "b5c6bb96b8f2c6c0efb07f936734ef5d", + "protein_translation": "MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001796" + ], + [ + "gene_synonym", + "ECK0516" + ], + [ + "gene_synonym", + "EcoGene:EG10793" + ], + [ + "gene_synonym", + "GI:16128507" + ], + [ + "gene_synonym", + "GeneID:949031" + ], + [ + "gene_synonym", + "JW0512" + ], + [ + "gene_synonym", + "NP_415056.1" + ], + [ + "gene_synonym", + "Pur2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG18" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "ade3" + ], + [ + "gene_synonym", + "b0523" + ], + [ + "gene_synonym", + "purE" + ] + ], + "dna_sequence": "ATGTCTTCCCGCAATAATCCGGCGCGTGTCGCCATCGTGATGGGGTCCAAAAGCGACTGGGCTACCATGCAGTTCGCCGCCGAAATCTTCGAAATCCTGAATGTCCCGCACCACGTTGAAGTGGTTTCTGCTCACCGCACCCCCGATAAACTGTTCAGCTTCGCCGAAAGCGCCGAAGAGAACGGTTATCAGGTGATTATTGCGGGCGCAGGCGGCGCAGCGCATCTGCCAGGCATGATTGCCGCCAAAACGCTGGTGCCGGTGCTGGGCGTGCCAGTACAGAGCGCCGCACTGAGCGGTGTCGATAGCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCAAACGCGGCGTTACTGGCAGCACAAATTCTTGCGACTCATGATAAAGAACTGCACCAGCGTCTGAATGACTGGCGCAAAGCCCAGACCGACGAAGTGCTGGAAAACCCGGACCCGCGAGGTGCGGCATGA", + "dna_sequence_length": 510, + "functions": [ + "N5-carboxyaminoimidazole ribonucleotide mutase" + ], + "id": "CDS_514", + "location": [ + [ + "NC_000913", + 553100, + "-", + 510 + ] + ], + "md5": "705f61ffbe2e1d20271f4b3b2c440ceb", + "parent_gene": "", + "protein_md5": "23739e0d7ba81c082008c3a9a94bcc78", + "protein_translation": "MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001804" + ], + [ + "gene_synonym", + "ECK0517" + ], + [ + "gene_synonym", + "EcoGene:EG12666" + ], + [ + "gene_synonym", + "GI:16128508" + ], + [ + "gene_synonym", + "GeneID:949053" + ], + [ + "gene_synonym", + "JW0513" + ], + [ + "gene_synonym", + "NP_415057.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43341" + ], + [ + "gene_synonym", + "b0524" + ], + [ + "gene_synonym", + "lpxH" + ], + [ + "gene_synonym", + "ybbF" + ] + ], + "dna_sequence": "GTGGCGACACTCTTTATTGCAGATCTTCATCTCTGCGTGGAAGAACCGGCGATCACCGCCGGTTTTCTGCGTTTTTTAGCGGGGGAAGCCCGCAAGGCCGACGCGCTGTATATTCTTGGCGATCTGTTTGAAGCATGGATTGGCGACGACGATCCCAACCCACTCCATCGCAAGATGGCGGCGGCGATCAAAGCGGTGTCCGATTCCGGCGTTCCCTGTTATTTCATTCATGGCAACCGTGATTTTCTGCTCGGCAAACGCTTTGCCCGTGAAAGTGGCATGACGTTATTGCCGGAAGAAAAGGTGCTCGAACTTTATGGTCGCCGGGTGTTGATTATGCATGGCGACACGCTGTGCACCGATGACGCGGGTTATCAGGCTTTTCGCGCCAAGGTCCACAAACCCTGGCTGCAGACGCTATTCCTCGCCCTGCCGTTGTTTGTGCGCAAACGCATTGCCGCGCGAATGCGCGCGAACAGCAAAGAAGCCAACAGCAGTAAATCGCTGGCGATCATGGACGTTAACCAAAACGCGGTGGTCAGTGCGATGGAAAAACATCAGGTGCAATGGCTGATCCACGGGCATACCCATCGCCCGGCGGTGCATGAACTTATCGCCAATCAGCAACCTGCTTTTCGCGTGGTACTGGGTGCCTGGCATACGGAAGGTTCAATGGTGAAAGTCACGGCGGATGACGTTGAGCTGATTCATTTTCCGTTTTAA", + "dna_sequence_length": 723, + "functions": [ + "UDP-2,3-diacylglucosamine pyrophosphohydrolase" + ], + "id": "CDS_515", + "location": [ + [ + "NC_000913", + 553940, + "-", + 723 + ] + ], + "md5": "1d951ab1f4e6d38abe8d48a38274186d", + "parent_gene": "", + "protein_md5": "2f3e3a9a17f660309d192d6cf0f92163", + "protein_translation": "MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001806" + ], + [ + "gene_synonym", + "ECK0518" + ], + [ + "gene_synonym", + "EcoGene:EG10758" + ], + [ + "gene_synonym", + "GI:16128509" + ], + [ + "gene_synonym", + "GeneID:949038" + ], + [ + "gene_synonym", + "JW0514" + ], + [ + "gene_synonym", + "NP_415058.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23869" + ], + [ + "gene_synonym", + "b0525" + ], + [ + "gene_synonym", + "ppiB" + ] + ], + "dna_sequence": "ATGGTTACTTTCCACACCAATCACGGCGATATTGTCATCAAAACTTTTGACGATAAAGCACCTGAAACAGTTAAAAACTTCCTGGACTACTGCCGCGAAGGTTTTTACAACAACACCATTTTCCACCGTGTTATCAACGGCTTTATGATTCAGGGCGGCGGTTTTGAACCGGGCATGAAACAAAAAGCCACCAAAGAACCGATCAAAAACGAAGCCAACAACGGCCTGAAAAATACCCGTGGTACGCTGGCAATGGCACGTACTCAGGCTCCGCACTCTGCAACTGCACAGTTCTTCATCAACGTGGTTGATAACGACTTCCTGAACTTCTCTGGCGAAAGCCTGCAAGGTTGGGGCTACTGCGTGTTTGCTGAAGTGGTTGACGGCATGGACGTGGTAGACAAAATCAAAGGTGTTGCAACCGGTCGTAGCGGTATGCACCAGGACGTGCCAAAAGAAGACGTTATCATTGAAAGCGTGACCGTTAGCGAGTAA", + "dna_sequence_length": 495, + "functions": [ + "peptidyl-prolyl cis-trans isomerase B (rotamase B)" + ], + "id": "CDS_516", + "location": [ + [ + "NC_000913", + 554437, + "-", + 495 + ] + ], + "md5": "0c2874b61dbf6743655255550ad61a84", + "parent_gene": "", + "protein_md5": "f49aebeb90a4ad3a326badae55e4200e", + "protein_translation": "MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001810" + ], + [ + "gene_synonym", + "ECK0519" + ], + [ + "gene_synonym", + "EcoGene:EG10196" + ], + [ + "gene_synonym", + "GI:16128510" + ], + [ + "gene_synonym", + "GeneID:946969" + ], + [ + "gene_synonym", + "JW0515" + ], + [ + "gene_synonym", + "NP_415059.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21888" + ], + [ + "gene_synonym", + "b0526" + ], + [ + "gene_synonym", + "cysS" + ] + ], + "dna_sequence": "ATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGATCTCTGTCATATCGGTCACGGGCGTACCTTTGTTGCTTTTGACGTGGTTGCGCGCTATCTGCGTTTCCTCGGCTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACGCGCCAATGAAAATGGCGAAAGCTTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTGCGGCGCTGGAGCGTCTCTACACTGCGCTGCGCGGCACAGATAAAACCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGAAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAATGGCATCTCACCTGCGTAAACTTTCCGCTGTATTGGGCCTGCTGGAGCAAGAACCGGAAGCGTTCCTGCAAAGCGGCGCGCAGGCAGACGACAGCGAAGTGGCTGAGATTGAAGCGTTAATTCAACAGCGTCTGGATGCCCGTAAAGCGAAAGACTGGGCGGCGGCGGATGCGGCGCGTGATCGTCTTAACGAGATGGGGATCGTGCTGGAAGATGGCCCGCAAGGGACCACCTGGCGTCGTAAGTAA", + "dna_sequence_length": 1386, + "functions": [ + "cysteinyl-tRNA synthetase" + ], + "id": "CDS_517", + "location": [ + [ + "NC_000913", + 554611, + "+", + 1386 + ] + ], + "md5": "394bf069333f5a52feb49fc7525c4993", + "parent_gene": "", + "protein_md5": "488e8ee7b9315d0a67267f130f8bf390", + "protein_translation": "MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001812" + ], + [ + "gene_synonym", + "ECK0520" + ], + [ + "gene_synonym", + "EcoGene:EG12708" + ], + [ + "gene_synonym", + "GI:16128511" + ], + [ + "gene_synonym", + "GeneID:945155" + ], + [ + "gene_synonym", + "JW0516" + ], + [ + "gene_synonym", + "NP_415060.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45570" + ], + [ + "gene_synonym", + "b0527" + ], + [ + "gene_synonym", + "ybcI" + ] + ], + "dna_sequence": "ATGCCAACCGTTATTACGCACGCCGCCGTTCCCCTATGCATTGGTTTAGGGTTGGGTTCGAAAGTCATCCCTCCGCGTCTGTTATTTGCCGGAATCATCCTGGCGATGCTGCCCGACGCCGACGTATTGTCGTTTAAATTTGGCGTTGCTTACGGCAATGTTTTTGGTCATCGCGGGTTTACCCATTCGCTGGTGTTTGCGTTTGTTGTCCCGCTGTTATGTGTGTTTATTGGACGCCGATGGTTCAGGGCTGGGCTGATTCGCTGCTGGCTGTTTTTAACCGTCTCGTTGCTATCGCACAGCTTGCTGGATTCGGTAACCACTGGCGGTAAAGGCGTTGGCTGGCTGTGGCCGTGGTCAGATGAACGCTTTTTCGCTCCCTGGCAGGTGATAAAAGTCGCGCCGTTTGCATTGTCTCGTTACACCACGCCGTACGGGCATCAGGTGATTATTTCTGAATTGATGTGGGTGTGGTTGCCGGGGATGCTACTGATGGGAATGTTGTGGTGGCGCAGACGATAA", + "dna_sequence_length": 522, + "functions": [ + "DUF457 family inner membrane protein" + ], + "id": "CDS_518", + "location": [ + [ + "NC_000913", + 556553, + "-", + 522 + ] + ], + "md5": "5a60de74b8ff6d0e12285f48a411a11f", + "parent_gene": "", + "protein_md5": "3714041152f9e4513d50ba46fec255b0", + "protein_translation": "MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001816" + ], + [ + "gene_synonym", + "ECK0521" + ], + [ + "gene_synonym", + "EcoGene:EG12879" + ], + [ + "gene_synonym", + "GI:90111146" + ], + [ + "gene_synonym", + "GeneID:945158" + ], + [ + "gene_synonym", + "JW5070" + ], + [ + "gene_synonym", + "NP_415061.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAS7" + ], + [ + "gene_synonym", + "b0528" + ], + [ + "gene_synonym", + "ybcJ" + ] + ], + "dna_sequence": "ATGGCGACATTTTCTTTAGGTAAACATCCGCACGTTGAGCTGTGCGACTTGCTGAAACTGGAAGGCTGGAGCGAAAGCGGCGCGCAGGCGAAAATCGCGATTGCCGAAGGCCAGGTGAAAGTCGACGGTGCGGTTGAAACGCGCAAACGCTGCAAAATCGTCGCCGGTCAGACAGTGAGTTTTGCAGGTCACAGCGTACAGGTTGTTGCCTGA", + "dna_sequence_length": 213, + "functions": [ + "ribosome-associated protein", + "putative RNA-binding protein" + ], + "id": "CDS_519", + "location": [ + [ + "NC_000913", + 556873, + "-", + 213 + ] + ], + "md5": "d1f38976cfb6781ced5dee2627960585", + "parent_gene": "", + "protein_md5": "be3bffad05a21fb01ce36039e534649b", + "protein_translation": "MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001818" + ], + [ + "gene_synonym", + "ECK0522" + ], + [ + "gene_synonym", + "EcoGene:EG10328" + ], + [ + "gene_synonym", + "GI:16128513" + ], + [ + "gene_synonym", + "GeneID:945221" + ], + [ + "gene_synonym", + "JW0518" + ], + [ + "gene_synonym", + "NP_415062.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24186" + ], + [ + "gene_synonym", + "ads" + ], + [ + "gene_synonym", + "b0529" + ], + [ + "gene_synonym", + "folD" + ] + ], + "dna_sequence": "ATGGCAGCAAAGATTATTGACGGTAAAACGATTGCGCAGCAGGTGCGCTCTGAAGTTGCTCAAAAAGTTCAGGCGCGTATTGCAGCCGGACTGCGGGCACCAGGACTGGCCGTTGTGCTGGTGGGTAGTAACCCTGCATCGCAAATTTATGTCGCAAGCAAACGCAAGGCTTGTGAAGAAGTCGGGTTCGTCTCCCGCTCTTATGACCTCCCGGAAACCACCAGCGAAGCGGAGCTGCTGGAGCTTATCGATACGCTGAATGCCGACAACACCATCGATGGCATTCTGGTTCAACTGCCGTTACCGGCGGGTATTGATAACGTCAAAGTGCTGGAACGTATTCATCCGGACAAAGACGTGGACGGTTTCCATCCTTACAACGTCGGTCGTCTGTGCCAGCGCGCGCCGCGTCTGCGTCCCTGCACCCCGCGCGGTATCGTCACGCTGCTTGAGCGTTACAACATTGATACCTTCGGCCTCAACGCCGTGGTGATTGGCGCATCGAATATCGTTGGCCGCCCGATGAGCATGGAACTGCTGCTGGCAGGTTGCACCACTACAGTGACTCACCGCTTCACTAAAAATCTGCGTCATCACGTAGAAAATGCCGATCTATTGATCGTTGCCGTTGGCAAGCCAGGCTTTATTCCCGGTGACTGGATCAAAGAAGGCGCAATTGTGATTGATGTCGGCATCAACCGTCTGGAAAATGGCAAAGTTGTGGGCGACGTCGTGTTTGAAGACGCGGCTAAACGCGCCTCATACATTACGCCTGTTCCCGGCGGCGTTGGCCCGATGACGGTTGCCACGCTGATTGAAAACACGCTACAGGCGTGCGTTGAATATCATGATCCACAGGATGAGTAA", + "dna_sequence_length": 867, + "functions": [ + "bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" + ], + "id": "CDS_520", + "location": [ + [ + "NC_000913", + 557741, + "-", + 867 + ] + ], + "md5": "140d547c978e9aa28f2ce657c8a8759a", + "parent_gene": "", + "protein_md5": "92cbdcce384924185dd9edf958868746", + "protein_translation": "MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001825" + ], + [ + "gene_synonym", + "ECK0523" + ], + [ + "gene_synonym", + "EcoGene:EG13881" + ], + [ + "gene_synonym", + "GI:90111147" + ], + [ + "gene_synonym", + "GeneID:945522" + ], + [ + "gene_synonym", + "JW0519" + ], + [ + "gene_synonym", + "NP_415063.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABW5" + ], + [ + "gene_synonym", + "b0530" + ], + [ + "gene_synonym", + "fimA" + ], + [ + "gene_synonym", + "sfmA" + ] + ], + "dna_sequence": "ATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGCCGCACTATTCGCCGCTACGGGTAGTTATGCTGCCGTTGTAGATGGCGGTACAATTCACTTTGAAGGCGAACTGGTGAATGCTGCCTGTTCAGTGAATACTGACTCGGCAGACCAGGTTGTCACACTCGGTCAATATCGTACCGATATTTTCAATGCTGTTGGTAATACCTCTGCATTAATTCCATTCACCATTCAGTTGAACGACTGCGATCCTGTTGTTGCCGCTAATGCTGCCGTTGCATTTTCTGGTCAGGCTGATGCAATCAATGATAATTTATTGGCCATTGCATCCAGTACCAATACAACAACAGCAACGGGTGTCGGTATTGAAATACTTGATAATACATCCGCAATTCTCAAACCTGATGGGAATAGCTTCTCAACCAACCAGAACTTGATCCCCGGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGGGCAAGCAAATGCTGACGCGACTTTTATTATGAGATATGAATAA", + "dna_sequence_length": 543, + "functions": [ + "FimA homolog, function unknown" + ], + "id": "CDS_521", + "location": [ + [ + "NC_000913", + 558212, + "+", + 543 + ] + ], + "md5": "7b688357ba2baf75b57377617fb96ce8", + "parent_gene": "", + "protein_md5": "d8b6dc9b6b16c07d82c1260cd9c31108", + "protein_translation": "MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001828" + ], + [ + "gene_synonym", + "ECK0524" + ], + [ + "gene_synonym", + "EcoGene:EG13882" + ], + [ + "gene_synonym", + "GI:16128515" + ], + [ + "gene_synonym", + "GeneID:945367" + ], + [ + "gene_synonym", + "JW0520" + ], + [ + "gene_synonym", + "NP_415064.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77249" + ], + [ + "gene_synonym", + "b0531" + ], + [ + "gene_synonym", + "fimC" + ], + [ + "gene_synonym", + "sfmC" + ] + ], + "dna_sequence": "ATGATGACTAAAATAAAGTTATTGATGCTCATTATATTTTATTTAATCATTTCGGCCAGCGCCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGTTAATTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGTGAACTTAAACTAA", + "dna_sequence_length": 693, + "functions": [ + "putative periplasmic pilus chaperone" + ], + "id": "CDS_522", + "location": [ + [ + "NC_000913", + 558974, + "+", + 693 + ] + ], + "md5": "58000748ddb33ee07c9c818981697448", + "parent_gene": "", + "protein_md5": "0f2e160654ea02ed170b76148c1c6487", + "protein_translation": "MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001830" + ], + [ + "gene_synonym", + "ECK0525" + ], + [ + "gene_synonym", + "EcoGene:EG13883" + ], + [ + "gene_synonym", + "GI:16128516" + ], + [ + "gene_synonym", + "GeneID:945160" + ], + [ + "gene_synonym", + "JW0521" + ], + [ + "gene_synonym", + "NP_415065.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77468" + ], + [ + "gene_synonym", + "b0532" + ], + [ + "gene_synonym", + "fimD" + ], + [ + "gene_synonym", + "sfmD" + ] + ], + "dna_sequence": "ATGAAAATACCCACTACTACGGATATTCCGCAGAGGTATACCTGGTGTCTGGCCGGAATTTGTTATTCATCTCTTGCCATTTTACCCTCCTTTTTAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGACAACAGAAAATACAGGTGATAAATCAGGTGGGTTAATGCCCTGTTTTAACCAGGTACTTCTTGAACGAATTGGCCTTAATAGCAGTGCATTTCCCGAGTTAGCCCAGCAGCAAAACAATAAATGCATCAATTTACTGAAAGCTGTACCTGATGCCACAATTAACTTTGATTTTGCAGCGATGCGCCTGAACATCACTATTCCTCAGATAGCGTTGTTGAGTAGCGCTCACGGTTACATTCCGCCTGAAGAGTGGGATGAAGGTATTCCTGCTTTACTCCTGAATTATAATTTCACCGGTAACAGAGGTAATGGTAACGATAGCTATTTTTTTAGTGAGCTCAGCGGGATTAATATTGGCCCGTGGCGTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAGAACAGTGGAATAATATTGGCACCTGGGTACAGCGCGCCATTATTCCGCTGAAAAGTGAACTGGTAATGGGAGACGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTGAAATTACAGATTTGCACCCGACATCTTCAAATGGCGATCTGGACGTCACCATCGACGAGCGCGATGGCAATCAGCAGAATTACACAATTCCGTATTCAACAGTGCCAATTTTACAACGCGAAGGGCGTTTCAAATTTGACCTGACGGCGGGCGATTTTCGTAGCGGTAATAGTCAGCAATCATCGCCTTTCTTTTTTCAGGGTACGGCACTCGGCGGTTTACCACAGGAATTTACTGCCTACGGCGGGACGCAATTATCTGCCAATTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTGGATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCCTCTATGCGAAATCGATGAACACCTTCGGCACCAATTTTCAGTTAATGGGTTACCGCTATTCGACACAAGGTTTTTATACCCTTGATGATGTTGCGTATCGTCGAATGGAGGGGTACGAATATGATTACGACGGTGAGCATCGCGATGAACCGATAATCGTGAATTACCACAATTTACGCTTTAGCCGTAAAGACCGTTTGCAGTTAAATGTTTCACAATCACTTAATGACTTTGGCTCGCTTTATATTTCTGGTACCCATCAAAAATACTGGAATACTTCGGATTCAGATACGTGGTATCAGGTGGGGTATACCAGCAGCTGGGTTGGCATCAGTTATTCGCTCTCATTTTCGTGGAATGAATCTGTAGGGATCCCCGATAACGAACGTATTGTCGGACTTAATGTTTCAGTGCCTTTCAATGTTTTGACCAAACGTCGCTACACCCGGGAAAATGCGCTCGACCGCGCTTATGCCTCCTTTAACGCCAACCGTAACAGCAACGGGCAAAATAGCTGGCTGGCAGGTGTAGGTGGGACCTTACTGGAAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGCCAGCCTTTAGGGGATACCAATGTTTTGATTAAAGCGCCTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTATGCGGTGATGCTGTATGCCACGGTTTATCGGTATAACCGTATCGCGCTTGATACCAATACGATGGGGAATTCCATCGATGTTGAAAAAAATATTAGCAGCGTTGTGCCGACGCAAGGCGCGTTGGTTCGTGCCAATTTTGATACCCGCATAGGCGTGCGGGCGCTCATTACCGTTACCCAGGGCGGAAAACCGGTGCCGTTTGGATCACTGGTACGGGAAAACAGTACCGGAATAACCAGTATGGTGGGTGATGACGGGCAAGTTTATTTAAGTGGTGCGCCATTGTCTGGTGAATTACTGGTTCAGTGGGGAGACGGCGCGAACTCACGCTGCATTGCGCACTATGTATTGCCGAAGCAAAGCTTACAGCAAGCCGTCACTGTTATTTCGGCAGTTTGCACACATCCTGGCTCATAA", + "dna_sequence_length": 2604, + "functions": [ + "putative outer membrane export usher protein" + ], + "id": "CDS_523", + "location": [ + [ + "NC_000913", + 559697, + "+", + 2604 + ] + ], + "md5": "05550df412151228650b03dbeea5c307", + "parent_gene": "", + "protein_md5": "7cf460cb639f3f18b7c0d051fe741d90", + "protein_translation": "MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADASRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNVSQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGGGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMLYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVTVISAVCTHPGS", + "protein_translation_length": 867, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001832" + ], + [ + "gene_synonym", + "ECK0526" + ], + [ + "gene_synonym", + "EcoGene:EG13884" + ], + [ + "gene_synonym", + "GI:145698227" + ], + [ + "gene_synonym", + "GeneID:945407" + ], + [ + "gene_synonym", + "JW5071" + ], + [ + "gene_synonym", + "NP_415066.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75715" + ], + [ + "gene_synonym", + "b0533" + ], + [ + "gene_synonym", + "fimH" + ], + [ + "gene_synonym", + "sfmH" + ] + ], + "dna_sequence": "TTGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCGGGGTGATGGATTCTCGTTTAATATTTCGTTTAAAGGTTATTCGTCCCTTTATTAACATGGTGGAGATCCCCAGACAGGTGATGTTTACCGTGTATGTGACATCAACGCCTTACGATCCGTTGGTTACACCTGTTTATACCATTAGTTTTGGTGGCCGGGTTGAAGTACCGCAAAACTGCGAATTAAATGCCGGGCAGATTGTTGAATTTGATTTTGGTGATATCGGCGCATCGTTATTTAGTGCGGCAGGGCCGGGTAATCGACCTGCTGGTGTCATGCCGCAAACCAAGAGCATTGCGGTCAAATGTACGAATGTTGCTGCGCAGGCTTATTTAACAATGCGTCTGGAAGCCAGTGCCGTTTCTGGTCAGGCGATGGTGTCGGACAATCAGGATTTAGGTTTTATTGTCGCCGATCAGAACGATACGCCGATCACGCCTAACGATCTCAATAGCGTTATTCCTTTCCGTCTGGATGCAGCTGCGGCAGCCAATGTCACACTTCGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGA", + "dna_sequence_length": 984, + "functions": [ + "FimA homolog, function unknown" + ], + "id": "CDS_524", + "location": [ + [ + "NC_000913", + 562336, + "+", + 984 + ] + ], + "md5": "e21f04ac0eede7acaa89ae38de8a96a7", + "parent_gene": "", + "protein_md5": "a2b3995d5e36075bc915d1d4f966a643", + "protein_translation": "MAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001834" + ], + [ + "gene_synonym", + "ECK0527" + ], + [ + "gene_synonym", + "EcoGene:EG12388" + ], + [ + "gene_synonym", + "GI:16128518" + ], + [ + "gene_synonym", + "GeneID:944977" + ], + [ + "gene_synonym", + "JW5072" + ], + [ + "gene_synonym", + "NP_415067.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38052" + ], + [ + "gene_synonym", + "b0534" + ], + [ + "gene_synonym", + "fimF" + ], + [ + "gene_synonym", + "sfmF" + ], + [ + "gene_synonym", + "ybcG" + ] + ], + "dna_sequence": "ATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAATATCAATTTGCACGGTAACGTTGTTGATTTCTCCTGTACCGTAAACACAGCGGATATTGATAAGACGGTAGATTTAGGCAGATGGCCTACGACACAACTACTGAACGCTGGCGATACCACGGCACTCGTCCCTTTTAGCCTGCGGCTGGAGGGATGTCCTCCGGGTTCAGTTGCGATTTTATTTACGGGAACGCCGGCATCCGATACCAACCTGCTGGCTCTGGATGATCCCGCAATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAA", + "dna_sequence_length": 516, + "functions": [ + "FimA homolog, function unknown" + ], + "id": "CDS_525", + "location": [ + [ + "NC_000913", + 563330, + "+", + 516 + ] + ], + "md5": "abdc5eeb1716c3843af97221b8533f16", + "parent_gene": "", + "protein_md5": "4b5f6de400d337442421bf165cae4003", + "protein_translation": "MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001836" + ], + [ + "gene_synonym", + "ECK0528" + ], + [ + "gene_synonym", + "EcoGene:EG11103" + ], + [ + "gene_synonym", + "GI:16128519" + ], + [ + "gene_synonym", + "GeneID:947079" + ], + [ + "gene_synonym", + "JW5073" + ], + [ + "gene_synonym", + "NP_415068.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEL8" + ], + [ + "gene_synonym", + "b0535" + ], + [ + "gene_synonym", + "fimZ" + ], + [ + "gene_synonym", + "sfmZ" + ], + [ + "gene_synonym", + "ybcA" + ] + ], + "dna_sequence": "ATGAAACCAACGTCGGTGATCATTATGGATACTCATCCTATCATCAGAATGTCTATTGAAGTTCTGTTGCAAAAAAACAGTGAATTGCAGATTGTCCTGAAAACGGATGATTATCGCATAACCATCGATTATCTCCGAACCCGTCCTGTTGATTTAATCATTATGGATATAGACTTGCCCGGAACAGACGGTTTTACCTTCCTGAAAAGGATCAAACAAATCCAGAGCACAGTGAAAGTGTTATTTTTATCATCGAAATCAGAATGCTTTTATGCTGGCAGAGCGATACAAGCTGGTGCTAACGGTTTTGTCAGTAAATGCAATGATCAGAATGATATTTTTCATGCCGTTCAGATGATCCTCTCCGGATACACGTTTTTTCCCAGCGAAACGCTTAACTATATAAAAAGCAATAAATGTAGTACGAATAGTTCAACGGTCACTGTGCTATCTAATCGTGAAGTGACCATATTACGTTATCTGGTTAGCGGATTATCTAATAAAGAAATTGCCGATAAGTTATTACTTAGCAATAAAACAGTTAGTGCGCATAAATCTAATATTTATGGCAAGCTAGGTTTGCATTCAATTGTAGAGCTTATCGACTACGCCAAATTATACGAATTAATATAA", + "dna_sequence_length": 633, + "functions": [ + "response regulator family protein" + ], + "id": "CDS_526", + "location": [ + [ + "NC_000913", + 564480, + "-", + 633 + ] + ], + "md5": "6dd6a10ac946e76a41c512b607b696de", + "parent_gene": "", + "protein_md5": "57364552b165d1bb4c748661516deda5", + "protein_translation": "MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVELIDYAKLYELI", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001842" + ], + [ + "gene_synonym", + "ECK0530" + ], + [ + "gene_synonym", + "EcoGene:EG10507" + ], + [ + "gene_synonym", + "GI:16128520" + ], + [ + "gene_synonym", + "GeneID:947162" + ], + [ + "gene_synonym", + "JW0525" + ], + [ + "gene_synonym", + "NP_415069.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24218" + ], + [ + "gene_synonym", + "b0537" + ], + [ + "gene_synonym", + "int" + ], + [ + "gene_synonym", + "intD" + ] + ], + "dna_sequence": "ATGTCACTCTTCCGCAGAAATGAAATATGGTATGCCTCGTATTCGCTCCCGGGCGGGAAACGAATTAAGGAATCTCTTGGCACAAAGGACAAACGGCAAGCTCAGGAGTTGCACGACAAGCGAAAAGCAGAACTCTGGCGAGTAGAAAAGCTAGGGGATTTACCTGATGTCACTTTTGAAGAGGCCTGCCTAAGATGGCTTGAGGAAAAAGCTGATAAAAAATCTCTCGATTCAGATAAAAGCCGGATTGAGTTCTGGCTTGAACATTTTGAGGGTATAAGGCTTAAAGATATCTCGGAGGCAAAGATTTACTCTGCTGTAAGCAGAATGCATAACAGAAAGACGAAAGAAATATGGAAACAGAAAGTTCAGGCCGCCATCAGGAAAGGTAAAGAACTGCCTGTTTATGAACCAAAGCCAGTATCAACTCAGACAAAGGCAAAGCATCTTGCCATGATAAAGGCCATTCTCCGTGCTGCAGAACGCGACTGGAAGTGGCTGGAAAAAGCGCCTGTCATCAAGATACCAGCGGTCAGAAACAAGCGAGTCAGATGGCTGGAAAAGGAGGAAGCAAAACGCCTTATTGATGAGTGCCCCGAACCACTGAAATCTGTCGTCAAGTTTGCGCTGGCAACTGGTCTGAGAAAGTCGAACATCATAAATCTGGAATGGCAACAAATCGACATGCAGCGACGAGTTGCCTGGGTGAATCCAGAAGAGAGCAAATCAAACCGCGCCATTGGTGTGGCGCTGAACGATACCGCCTGTAAAGTGTTGCGTGATCAAATAGGCAAGCATCACAAATGGGTGTTTGTACATACCAAGGCGGCTAAGCGAGCAGATGGAACATCAACGCCTGCGGTCAGGAAGATGCGCATCGACAGCAAGACATCATGGCTATCAGCTTGTCGTCGTGCAGGAATTGAAGATTTCCGTTTCCATGACCTCAGACACACCTGGGCAAGCTGGCTGATTCAGTCAGGCGTCCCATTATCAGTGCTTCAGGAAATGGGCGGATGGGAGTCCATAGAAATGGTTCGTAGGTATGCTCACCTTGCGCCTAATCATTTGACAGAGCATGCGAGGAAAATAGACGACATTTTTGGTGATAATGTCCCAAATATGTCCCACTCTGAAATTATGGAGGATATAAAGAAGGCGTAA", + "dna_sequence_length": 1164, + "functions": [ + "DLP12 prophage", + "putative phage integrase" + ], + "id": "CDS_527", + "location": [ + [ + "NC_000913", + 565978, + "-", + 1164 + ] + ], + "md5": "91ff06f7e03f2e5bd20fc1c93bbd04ba", + "parent_gene": "", + "protein_md5": "0424a48644d9490cff421d7856d27a22", + "protein_translation": "MSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLGDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSEIMEDIKKA", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4435" + ], + [ + "gene_synonym", + "EcoGene:EG12348" + ], + [ + "gene_synonym", + "GeneID:5625559" + ], + [ + "gene_synonym", + "b4633" + ], + [ + "gene_synonym", + "xisD" + ], + [ + "gene_synonym", + "ybcB" + ] + ], + "dna_sequence": "TCCGGGTACCTCACAACACGGCAAGCCTGCATTGCGGCGCTTCAGTCTCCGCTGCATACTGTCCAGGTGAGCGCGGGTGATGGCATAACAGAGGAAAGAAAATGTCACTCTTCCGCAGAAATGAAATATGGTATGCCTCGTATTCGCTCCCGGGCGGGAAACGAATTAAGGAATCTCTTGGCACAAAGGACAAACGGCAAGCTCAGGAGTTGCACGACAAGC", + "dna_sequence_length": 222, + "id": "CDS_528", + "location": [ + [ + "NC_000913", + 566079, + "-", + 222 + ] + ], + "md5": "d6c1fd869ba567e8b2a7e7d3a5624468", + "parent_gene": "", + "protein_md5": "f085ca54b3b4e3e8c503986d21640b35", + "protein_translation": "SGYLTTRQACIAALQSPLHTVQVSAGDGITEERKCHSSAEMKYGMPRIRSRAGNELRNLLAQRTNGKLRSCTTS", + "protein_translation_length": 74, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001850" + ], + [ + "gene_synonym", + "ECK0531" + ], + [ + "gene_synonym", + "EcoGene:EG12349" + ], + [ + "gene_synonym", + "GeneID:947902" + ], + [ + "gene_synonym", + "JW0526" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75717" + ], + [ + "gene_synonym", + "b0539" + ], + [ + "gene_synonym", + "exoD" + ], + [ + "gene_synonym", + "ybcC" + ] + ], + "dna_sequence": "ACCTCCCGGGATTTCATGAAATTCCGGCTCGGTGGTTTCGAGGCAATAAAATCGGCTTACATGGCCCAGGTGCAGTACAGCATGTGGGTGACGCGAAAAGATGCCTGGTACTTTGCCAACTATGACCCGCGCATGAAGCGTGAAGGCCTGCATTATGTCGTGATTGAGCGGAATGAAAAGTACATGGCGAGTTTTGACGAGATGGTGCCGGAGTTCATCGAAAAAATGGACGAGGCACTGGCTGAAATTGGTTTTGTATTTGGGGAGCAATGGCGATGA", + "dna_sequence_length": 279, + "id": "CDS_529", + "location": [ + [ + "NC_000913", + 566376, + "-", + 279 + ] + ], + "md5": "22cd58b40ef510ac71a7ae569cbbe1f1", + "parent_gene": "", + "protein_md5": "d4c67d80412ea41fd0f13ba95bcb0fb9", + "protein_translation": "TSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285029" + ], + [ + "gene_synonym", + "ECK0532" + ], + [ + "gene_synonym", + "EcoGene:EG12350" + ], + [ + "gene_synonym", + "GeneID:945299" + ], + [ + "gene_synonym", + "JW0527" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77528" + ], + [ + "gene_synonym", + "b4508" + ], + [ + "gene_synonym", + "peaD" + ], + [ + "gene_synonym", + "ybcD" + ] + ], + "dna_sequence": "TACGAGTATTGCCGGAAGCGTGGCCTGTATCCGGATGCAGAGTCTTATCCGTGGAAATCGAACGCGCATTACTGGTTGGTTACCAACTTGTACCAGAACATGCGGGCCAATGCGCTGGCTGACGCGGAATTACGGCGCAAGGCTGCCGATGAACTGACCTGTATGACAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGA", + "dna_sequence_length": 312, + "id": "CDS_530", + "location": [ + [ + "NC_000913", + 566376, + "+", + 312 + ] + ], + "md5": "ce9fe51783dc61d57b0b234e6ba540f2", + "parent_gene": "", + "protein_md5": "f56b879b9cc47f417f8a76d6597abed5", + "protein_translation": "YEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001860" + ], + [ + "gene_synonym", + "ECK0533" + ], + [ + "gene_synonym", + "EcoGene:EG12351" + ], + [ + "gene_synonym", + "GeneID:945024" + ], + [ + "gene_synonym", + "JW0530" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75718" + ], + [ + "gene_synonym", + "b0542" + ], + [ + "gene_synonym", + "renD" + ], + [ + "gene_synonym", + "ybcE" + ] + ], + "dna_sequence": "ATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGA", + "dna_sequence_length": 306, + "id": "CDS_531", + "location": [ + [ + "NC_000913", + 566684, + "+", + 93 + ], + [ + "NC_000913", + 568035, + "+", + 213 + ] + ], + "md5": "7cb36fc550ef2746f3cdd721bb4ff3c0", + "parent_gene": "", + "protein_md5": "c5f2399e219a72b12bb84fbaa6c516e0", + "protein_translation": "MTGKEAIIHYLGTHKSFCAQDVAAVTGATVITSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001855" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524703" + ], + [ + "gene_synonym", + "GeneID:945759" + ], + [ + "gene_synonym", + "NP_415072.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF68" + ], + [ + "gene_synonym", + "b0540" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_532", + "location": [ + [ + "NC_000913", + 566842, + "+", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001857" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16128524" + ], + [ + "gene_synonym", + "GeneID:947988" + ], + [ + "gene_synonym", + "NP_415073.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF81" + ], + [ + "gene_synonym", + "b0541" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", + "dna_sequence_length": 867, + "functions": [ + "IS3 transposase B" + ], + "id": "CDS_533", + "location": [ + [ + "NC_000913", + 567138, + "+", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001863" + ], + [ + "gene_synonym", + "ECK0534" + ], + [ + "gene_synonym", + "EcoGene:EG10629" + ], + [ + "gene_synonym", + "GI:16128526" + ], + [ + "gene_synonym", + "GeneID:948442" + ], + [ + "gene_synonym", + "JW0531" + ], + [ + "gene_synonym", + "NP_415075.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23895" + ], + [ + "gene_synonym", + "b0543" + ], + [ + "gene_synonym", + "eb" + ], + [ + "gene_synonym", + "emrE" + ], + [ + "gene_synonym", + "mvrC" + ] + ], + "dna_sequence": "ATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAA", + "dna_sequence_length": 333, + "functions": [ + "DLP12 prophage", + "multidrug resistance protein" + ], + "id": "CDS_534", + "location": [ + [ + "NC_000913", + 568315, + "+", + 333 + ] + ], + "md5": "cb1680e9f09f6126d3d0fc73647fc39b", + "parent_gene": "", + "protein_md5": "cc2acbbd9c610dff654a6bf231950827", + "protein_translation": "MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001866" + ], + [ + "gene_synonym", + "ECK0535" + ], + [ + "gene_synonym", + "EcoGene:EG13627" + ], + [ + "gene_synonym", + "GI:16128527" + ], + [ + "gene_synonym", + "GeneID:945166" + ], + [ + "gene_synonym", + "JW0532" + ], + [ + "gene_synonym", + "NP_415076.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77698" + ], + [ + "gene_synonym", + "b0544" + ], + [ + "gene_synonym", + "ybcK" + ] + ], + "dna_sequence": "ATGAAAAAAGCCATAGCATATATGCGATTTTCATCACCAGGTCAGATGTCTGGCGACTCATTAAACCGACAGAGAAGACTTATTGCTGAATGGTTAAAGGTAAATAGTGATTATTATCTTGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATTAATAAAAGCCATACTTATAGCACAAAGGGCAAATGAAGAAAGCGAGATAAAGTCAAGTCGGGTTAAATTATCATGGAAGAAAAAACGGCAGGATGCACTGGAATCAGGTACGATTATGACGGCGTCTTGTCCGAGATGGCTCTCCTTAGATGACAAAAGAACGGCTTTTGTTCCAGACCCCGACAGGGTGAAAACTATTGAGCTAATTTTTAAACTCAGGATGGAAAGGCGCTCATTGAATGCAATAGCCAAGTATTTAAATGATCATGCTGTAAAGAATTTCTCAGGAAAAGAAAGTGCATGGGGACCTTCTGTAATTGAAAAATTATTAGCGAATAAAGCTCTGATAGGTATTTGCGTACCTTCATATCGTGCAAGAGGGAAAGGGATAAGTGAAATCGCTGGCTATTATCCCAGAGTCATATCAGATGATTTGTTTTACGCTGTACAGGAAATTCGGTTGGCACCTTTTGGTATTAGCAATAGTAGCAAGAATCCTATGCTAATAAATCTACTTCGAACAGTTATGAAGTGTGAGGCTTGTGGTAATACCATGATTGTTCATGCGGTATCTGGAAGTTTGCATGGCTATTATGTTTGTCCGATGAGAAGATTACATCGATGTGACAGGCCATCAATAAAAAGAGATTTGGTTGATTATAATATCATTAATGAATTGCTTTTTAATTGTAGCAAAATTCAACCAGTTGAAAACAAGAAAGATGCTAATGAAACTTTAGAGTTAAAAATTATTGAGCTTCAGATGAAAATTAATAATTTAATCGTTGCATTGTCTGTCGCGCCTGAAGTTACCGCTATAGCAGAGAAAATAAGACTATTAGATAAGGAATTACGAAGGGCTTCGGTATCATTGAAAACTTTGAAGAGTAAAGGTGTAAATTCATTCAGTGATTTTTATGCTATTGACTTAACCAGTAAAAATGGACGAGAGTTATGCCGTACACTTGCCTATAAAACATTCGAAAAAATCATAATTAATACGGATAATAAAACCTGTGATATCTATTTTATGAATGGCATTGTTTTTAAACACTATCCTTTAATGAAAGTAATATCCGCCCAGCAGGCGATAAGTGCTCTCAAATATATGGTTGATGGTGAGATTTATTTCTAA", + "dna_sequence_length": 1527, + "functions": [ + "DLP12 prophage", + "putative recombinase" + ], + "id": "CDS_535", + "location": [ + [ + "NC_000913", + 568902, + "+", + 1527 + ] + ], + "md5": "fa50dbc122f62a8563dfd8b0978dc853", + "parent_gene": "", + "protein_md5": "5f1d1addbd85fbc1ec369c24df96490d", + "protein_translation": "MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGLSAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIERLKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSSRVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELIFKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGICVPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLINLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVDYNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPEVTAIAEKIRLLDKELRRASVSLKTLKSKGVNSFSDFYAIDLTSKNGRELCRTLAYKTFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKYMVDGEIYF", + "protein_translation_length": 508, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001869" + ], + [ + "gene_synonym", + "ECK0536" + ], + [ + "gene_synonym", + "EcoGene:EG13628" + ], + [ + "gene_synonym", + "GI:16128528" + ], + [ + "gene_synonym", + "GeneID:945165" + ], + [ + "gene_synonym", + "JW0533" + ], + [ + "gene_synonym", + "NP_415077.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77368" + ], + [ + "gene_synonym", + "b0545" + ], + [ + "gene_synonym", + "ybcL" + ] + ], + "dna_sequence": "ATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCTGCAGCATTTCAGGTCACTAGTAATGAAATAAAAACAGGAGAGCAACTTACAACGTCTCATGTCTTTTCTGGATTTGGGTGTGAAGGTGGTAATACATCGCCCTCATTAACCTGGTCTGGTGTTCCTGAAGGTACCAAAAGCTTTGCCGTAACTGTATATGATCCAGATGCACCTACAGGCAGTGGTTGGTGGCATTGGACTGTTGTTAATATTCCAGCAACAGTAACATATTTGCCCGTTGATGCAGGGAGACGTGATGGAACAAAACTGCCGACTGGTGCTGTTCAAGGCCGAAATGATTTTGGCTATGCTGGGTTTGGTGGCGCATGTCCTCCTAAAGGAGATAAACCACATCATTACCAGTTTAAAGTATGGGCTCTAAAAACTGAAAAGATTCCTGTAGATTCTAACTCCAGCGGAGCGTTAGTTGGTTATATGCTTAATGCTAATAAAATCGCAACCGCTGAGATAACACCAGTTTATGAGATAAAGTAG", + "dna_sequence_length": 552, + "functions": [ + "inactive polymorphonuclear leukocyte migration suppressor", + "DLP12 prophage", + "UPF0098 family secreted protein" + ], + "id": "CDS_536", + "location": [ + [ + "NC_000913", + 570893, + "+", + 552 + ] + ], + "md5": "3425277f765609afef9910927301bea6", + "parent_gene": "", + "protein_md5": "25eaf4180042c1959cf7b787b91c367c", + "protein_translation": "MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001871" + ], + [ + "gene_synonym", + "ECK0537" + ], + [ + "gene_synonym", + "EcoGene:EG13629" + ], + [ + "gene_synonym", + "GI:16128529" + ], + [ + "gene_synonym", + "GeneID:945163" + ], + [ + "gene_synonym", + "JW0534" + ], + [ + "gene_synonym", + "NP_415078.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77634" + ], + [ + "gene_synonym", + "b0546" + ], + [ + "gene_synonym", + "ybcM" + ] + ], + "dna_sequence": "ATGCTGGCAAGAGGTAAGACTAACTTAAAGATCGAAGAAATACGGATGCATAAACATCATGAGATTCATAGGGTTAAGCCTCTTATGCCAGCTTTGTGTCGTATCCGTCAGGGAAAGAAAGTTATCAATTGGGAGACGCATACTTTAACTGTTGATAATAATCAAATAATATTATTTCCTTGTGGTTATGAATTTTATATTGAGAATTATCCTGAAGCAGGGCTTTATCTTGCAGAAATGCTTTACTTACCCATTGATTTAATTGAGAGTTTCCAAAAACTTTATACGGTAACTGATCAAATACGTAACAAAACAAGTTTCTTTTTACCTCAGAATCCTGAGTTAATATATTGTTGGGAGCAACTAAAAACATCTGTTTCCCGAGGCTTCTCAACTAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATAAGAAAAGCTTCCAGAGAGTAA", + "dna_sequence_length": 798, + "functions": [ + "DLP12 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_537", + "location": [ + [ + "NC_000913", + 571454, + "+", + 798 + ] + ], + "md5": "ea14968d08dcff0934ae6212f05e0a94", + "parent_gene": "", + "protein_md5": "91be061971f54c79b3849275a50f0bff", + "protein_translation": "MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4398" + ], + [ + "gene_synonym", + "EcoGene:EG14355" + ], + [ + "gene_synonym", + "GI:145698228" + ], + [ + "gene_synonym", + "GeneID:5061504" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47268" + ], + [ + "gene_synonym", + "YP_001165308.1" + ], + [ + "gene_synonym", + "b4588" + ], + [ + "gene_synonym", + "ylcH" + ] + ], + "dna_sequence": "ATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGA", + "dna_sequence_length": 102, + "functions": [ + "uncharacterized protein, DLP12 prophage" + ], + "id": "CDS_538", + "location": [ + [ + "NC_000913", + 572368, + "+", + 102 + ] + ], + "md5": "0350a6fb03d92bd8809bca624ea021ae", + "parent_gene": "", + "protein_md5": "205a7d3da753f1a7676a415375eafe12", + "protein_translation": "MRTYNPNSLLPSQMQKCTCNSLHLAFDLCGGEA", + "protein_translation_length": 33, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001874" + ], + [ + "gene_synonym", + "ECK0538" + ], + [ + "gene_synonym", + "EcoGene:EG13630" + ], + [ + "gene_synonym", + "GI:16128530" + ], + [ + "gene_synonym", + "GeneID:945162" + ], + [ + "gene_synonym", + "JW0535" + ], + [ + "gene_synonym", + "NP_415079.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47269" + ], + [ + "gene_synonym", + "b0547" + ], + [ + "gene_synonym", + "ybcN" + ] + ], + "dna_sequence": "GTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCACTCAGCCACATGTGGTACAGCGAAATCAGTGAATACCTCATCAGCAGGGGTAAAACGTTCGCCACTCCAGCTTGGGTAAAAGATGCTCTCAAACACACATATCTCGGTTATGAAACCAAAGACCTGGTTGATGTCGTAACCGGTGATATCACCACTATCCAGTCGTTACGCCATACCTCCGATCTTGATACCGGAGAGATGTATGTCTTCCTGTGTAAGGTTGAAGCCTGGGCGATGAATATTGGTTGCCACCTGACTATTCCACAGAGCTGCGAGTTCCAGCTGCTGCGCGACAAGCAGGAGGCGTAA", + "dna_sequence_length": 456, + "functions": [ + "DLP12 prophage", + "uncharacterized protein" + ], + "id": "CDS_539", + "location": [ + [ + "NC_000913", + 572466, + "+", + 456 + ] + ], + "md5": "53480931d385a8181866e1538143f4d3", + "parent_gene": "", + "protein_md5": "23bb8ff816837673f71a3706e5767084", + "protein_translation": "MNLSQDGIKLHRGNFTAIGRQIQPYLEEGKCFRMVLKPWREKRSLSQNALSHMWYSEISEYLISRGKTFATPAWVKDALKHTYLGYETKDLVDVVTGDITTIQSLRHTSDLDTGEMYVFLCKVEAWAMNIGCHLTIPQSCEFQLLRDKQEA", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001876" + ], + [ + "gene_synonym", + "ECK0539" + ], + [ + "gene_synonym", + "EcoGene:EG14286" + ], + [ + "gene_synonym", + "GI:16128531" + ], + [ + "gene_synonym", + "GeneID:945151" + ], + [ + "gene_synonym", + "JW0536" + ], + [ + "gene_synonym", + "NP_415080.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47270" + ], + [ + "gene_synonym", + "b0548" + ], + [ + "gene_synonym", + "ninE" + ] + ], + "dna_sequence": "ATGGCTACACCGCTTATTCGTGTCATGAACGGACACATCTACAGAGTACCAAATCGTCGTAAGCGTAAACCTGAGCTGAAGCCATCCGAAATACCAACACTGCTCGGATATACCGCCAGCTTGGTTGATAAAAAATGGTTGCGACTGGCAGCAAGGAGGAGTCATGGCTGA", + "dna_sequence_length": 171, + "functions": [ + "DLP12 prophage", + "conserved protein" + ], + "id": "CDS_540", + "location": [ + [ + "NC_000913", + 572921, + "+", + 171 + ] + ], + "md5": "670ad2325d0c13b5164fa552eb9b9009", + "parent_gene": "", + "protein_md5": "81ffdfe3b9933e7082e5c1cc59076266", + "protein_translation": "MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG", + "protein_translation_length": 56, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001878" + ], + [ + "gene_synonym", + "ECK0540" + ], + [ + "gene_synonym", + "EcoGene:EG13631" + ], + [ + "gene_synonym", + "GI:16128532" + ], + [ + "gene_synonym", + "GeneID:945147" + ], + [ + "gene_synonym", + "JW0537" + ], + [ + "gene_synonym", + "NP_415081.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68661" + ], + [ + "gene_synonym", + "b0549" + ], + [ + "gene_synonym", + "ybcO" + ] + ], + "dna_sequence": "ATGGCTGATTTGAGAAAAGCAGCGCGTGGTCGGGAATGCCAGGTAAGAATCCCTGGCGTATGTAATGGCAACCCTGAAACGTCTGTACTGGCACATATCCGGCTGACTGGATTGTGCGGCACCGGTACGAAACCGCCAGACCTGATTGCCACCATTGCATGTTCTGCCTGCCACGACGAAATCGACCGCCGCACGCATTTTGTTGACGCTGGATATGCAAAAGAATGCGCGCTGGAAGGTATGGCGAGAACACAGGTTATCTGGCTGAAAGAGGGGGTTATTAAGGCGTGA", + "dna_sequence_length": 291, + "functions": [ + "DLP12 prophage", + "uncharacterized protein" + ], + "id": "CDS_541", + "location": [ + [ + "NC_000913", + 573084, + "+", + 291 + ] + ], + "md5": "324cef30433b6c660f7974f944d7c5be", + "parent_gene": "", + "protein_md5": "379ba4668752b97af4a7612d6265d3ef", + "protein_translation": "MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001880" + ], + [ + "gene_synonym", + "ECK0541" + ], + [ + "gene_synonym", + "EcoGene:EG20283" + ], + [ + "gene_synonym", + "GI:16128533" + ], + [ + "gene_synonym", + "GeneID:945174" + ], + [ + "gene_synonym", + "JW0538" + ], + [ + "gene_synonym", + "NP_415082.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG74" + ], + [ + "gene_synonym", + "b0550" + ], + [ + "gene_synonym", + "rus" + ], + [ + "gene_synonym", + "rusA" + ], + [ + "gene_synonym", + "ybcP" + ] + ], + "dna_sequence": "GTGAATACCTACAGCATCACATTACCCTGGCCTCCGAGCAATAATCGCTATTACCGCCATAATCGCGGGCGCACGCACGTCAGCGCAGAGGGGCAGGCATACCGCGATAACGTCGCCCGAATCATTAAAAACGCAATGCTGGATATCGGCCTGGCTATGCCTGTGAAAATCCGCATTGAGTGCCACATGCCGGATCGCCGTCGCCGTGACCTGGATAATCTGCAAAAAGCCGCTTTTGACGCACTCACTAAAGCAGGTTTCTGGCTGGATGATGCTCAGGTCGTTGATTACCGCGTTGTGAAGATGCCTGTTACCAAAGGTGGGAGGCTGGAACTGACCATCACCGAAATGGGGAATGAATGA", + "dna_sequence_length": 363, + "functions": [ + "DLP12 prophage", + "endonuclease RUS" + ], + "id": "CDS_542", + "location": [ + [ + "NC_000913", + 573371, + "+", + 363 + ] + ], + "md5": "761bf0e8ab607fdd6ef09e8d7552f1ca", + "parent_gene": "", + "protein_md5": "42218bcb360161f6d7866765d1043029", + "protein_translation": "MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285030" + ], + [ + "gene_synonym", + "ECK0542" + ], + [ + "gene_synonym", + "EcoGene:EG14354" + ], + [ + "gene_synonym", + "GI:94541097" + ], + [ + "gene_synonym", + "GeneID:1450240" + ], + [ + "gene_synonym", + "JW5076" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47272" + ], + [ + "gene_synonym", + "YP_588439.1" + ], + [ + "gene_synonym", + "b4509" + ], + [ + "gene_synonym", + "ylcG" + ] + ], + "dna_sequence": "ATGATGTTTGAGTTTAATATGGCAGAACTTCTTCGCCACCGCTGGGGGCGTCTGCGCTTATATCGTTTCCCCGGTTCTGTTTTGACCGATTACCGAATACTGAAGAATTACGCCAAAACCCTGACAGGAGCAGGAGTATGA", + "dna_sequence_length": 141, + "functions": [ + "uncharacterized protein, DLP12 prophage" + ], + "id": "CDS_543", + "location": [ + [ + "NC_000913", + 573730, + "+", + 141 + ] + ], + "md5": "fccaa2ca45f2d9112cd831e10c6dab2c", + "parent_gene": "", + "protein_md5": "e474d6a4056ba8e81b16a89fca954676", + "protein_translation": "MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001883" + ], + [ + "gene_synonym", + "ECK0543" + ], + [ + "gene_synonym", + "EcoGene:EG13633" + ], + [ + "gene_synonym", + "GI:16128534" + ], + [ + "gene_synonym", + "GeneID:945177" + ], + [ + "gene_synonym", + "JW0539" + ], + [ + "gene_synonym", + "NP_415083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47274" + ], + [ + "gene_synonym", + "b0551" + ], + [ + "gene_synonym", + "quuD" + ], + [ + "gene_synonym", + "ybcQ" + ] + ], + "dna_sequence": "ATGCGTGATATTCAGATGGTTCTTGAGCGTTGGGGAGCGTGGGCGGCTAATAATCATGAAGATGTGACCTGGTCGTCCATTGCCGCCGGTTTTAAGGGATTAATTACTTCAAAAGTAAAATCTCGCCCGCAATGTTGTGACGATGACGCGATGATCATTTGCGGGTGCATGGCCCGTCTGAAAAAGAACAACAGCGATTTGCACGATTTATTAGTAGATTATTATGTAGTCGGTATGACATTCATGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAA", + "dna_sequence_length": 384, + "functions": [ + "DLP12 prophage", + "putative antitermination protein" + ], + "id": "CDS_544", + "location": [ + [ + "NC_000913", + 573956, + "+", + 384 + ] + ], + "md5": "27d666a5964ca6f81ba43f81c1a0d722", + "parent_gene": "", + "protein_md5": "ea6effe23b82c9a670bc4d4a01174cd1", + "protein_translation": "MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001888" + ], + [ + "gene_synonym", + "ECK0544" + ], + [ + "gene_synonym", + "EcoGene:EG10659" + ], + [ + "gene_synonym", + "GeneID:946786" + ], + [ + "gene_synonym", + "JW5078" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21420" + ], + [ + "gene_synonym", + "b0553" + ], + [ + "gene_synonym", + "nmpC" + ], + [ + "gene_synonym", + "phmA" + ] + ], + "dna_sequence": "ATGAAAAAATTAACAGTGGCAATTTCTGCTGTAGCTGCATCAGTACTAATGGCGATGTCTGCTCAGGCAGCTGAAATTTATAATAAAGACAGTAACAAGCTGGATCTGTACGGGAAAGTTAATGCTAAGCACTACTTCTCCTCTAATGATGCAGATGATGGTGATACTACTTATGCCCGTCTTGGCTTCAAAGGTGAAACCCAAATCAACGATCAACTGACTGGTTTCGGTCAGTGGGAATATGAATTCAAAGGCAACCGCGCTGAATCTCAAGGTTCCTCCAAAGATAAAACCCGTCTTGCCTTCGCTGGCCTGAAATTCGGTGACTACGGCTCCATCGATTACGGCCGTAACTACGGTGTAGCATACGACATCGGTGCGTGGACTGACGTCCTGCCAGAATTCGGTGGTGACACTTGGACTCAAACCGACGTGTTCATGACTCAACGTGCAACTGGTGTTGCAACCTATCGTAACAACGACTTCTTTGGTCTGGTTGATGGTCTGAACTTTGCTGCTCAGTACCAAGGCAAAAACGATCGTAGCGATTTCGATAACTACACTGAAGGTAACGGTGATGGCTTCGGTTTCTCTGCTACCTATGAATACGAAGGATTCGGTATCGGTGCAACTTATGCGAAATCTGATCGTACCGACACTCAAGTTAATGCAGGGAAAGTTCTTCCTGAAGTATTTGCTTCCGGTAAAAATGCAGAAGTTTGGGCCGCAGGTCTGAAATATGACGCTAACAACATTTACCTGGCCACTACCTATTCTGAAACCCAGAATATGACTGTATTTGCTGATCACTTCGTTGCTAATAAAGCCCAAAACTTCGAAGCTGTTGCACAATATCAGTTCGATTTCGGTCTGCGTCCGTCCGTTGCTTACCTGCAATCTAAAGGTAAGGATCTTGGAGTATGGGGCGATCAGGACTTAGTCAAATATGTTGATGTAGGTGCAACCTATTACTTCAACAAAAATATGTCTACTTTCGTTGATTACAAAATCAACCTGCTTGACAAAAATGACTTCACTAAAGCACTCGGTGTAAGCACTGATGACATCGTTGCTGTAGGTCTGGTTTACCAGTTCTAA", + "dna_sequence_length": 1098, + "id": "CDS_545", + "location": [ + [ + "NC_000913", + 576825, + "-", + 1040 + ], + [ + "NC_000913", + 574586, + "-", + 58 + ] + ], + "md5": "9e25d5e4f18329342969018dacda268a", + "parent_gene": "", + "protein_md5": "b1569c786792077aa544606cc47a4b36", + "protein_translation": "MKKLTVAISAVAASVLMAMSAQAAEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFAGLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEGFGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLATTYSETQNMTVFADHFVANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001886" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16128535" + ], + [ + "gene_synonym", + "GeneID:946163" + ], + [ + "gene_synonym", + "NP_415084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE50" + ], + [ + "gene_synonym", + "b0552" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_546", + "location": [ + [ + "NC_000913", + 575753, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001895" + ], + [ + "gene_synonym", + "ECK0545" + ], + [ + "gene_synonym", + "EcoGene:EG13634" + ], + [ + "gene_synonym", + "GI:16128537" + ], + [ + "gene_synonym", + "GeneID:947545" + ], + [ + "gene_synonym", + "JW0543" + ], + [ + "gene_synonym", + "NP_415086.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9R2" + ], + [ + "gene_synonym", + "b0554" + ], + [ + "gene_synonym", + "essD" + ], + [ + "gene_synonym", + "ybcR" + ] + ], + "dna_sequence": "ATGAAATCCATGGATAAGTTAACAACGGGTGTCGCCTATGGCACCTCAGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAA", + "dna_sequence_length": 216, + "functions": [ + "DLP12 prophage", + "putative phage lysis protein" + ], + "id": "CDS_547", + "location": [ + [ + "NC_000913", + 577398, + "+", + 216 + ] + ], + "md5": "0efeb583b6aa243f942f67a72bd6a294", + "parent_gene": "", + "protein_md5": "749ab00c4909f333cf0f172c92eac7e0", + "protein_translation": "MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001898" + ], + [ + "gene_synonym", + "ECK0546" + ], + [ + "gene_synonym", + "EcoGene:EG13635" + ], + [ + "gene_synonym", + "GI:16128538" + ], + [ + "gene_synonym", + "GeneID:947539" + ], + [ + "gene_synonym", + "JW0544" + ], + [ + "gene_synonym", + "NP_415087.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78285" + ], + [ + "gene_synonym", + "arrD" + ], + [ + "gene_synonym", + "b0555" + ], + [ + "gene_synonym", + "rrrD" + ], + [ + "gene_synonym", + "ybcS" + ] + ], + "dna_sequence": "ATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACGTGGGTGCTGGCAATTTTAGAACATCGACGCTTCTTCGCAAAATAAACCAGGGCGATATCAAAGGCGCATGTGATCAGCTGCGTCGCTGGACATACGCTGGCGGTAAGCAATGGAAAGGCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGA", + "dna_sequence_length": 498, + "functions": [ + "DLP12 prophage", + "putative lysozyme" + ], + "id": "CDS_548", + "location": [ + [ + "NC_000913", + 577613, + "+", + 498 + ] + ], + "md5": "1da8da293919493d5f449f024ceac9ac", + "parent_gene": "", + "protein_md5": "2cac693b45316b5b73725312c20a0ddb", + "protein_translation": "MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001900" + ], + [ + "gene_synonym", + "ECK0547" + ], + [ + "gene_synonym", + "EcoGene:EG13636" + ], + [ + "gene_synonym", + "GI:16128539" + ], + [ + "gene_synonym", + "GeneID:945929" + ], + [ + "gene_synonym", + "JW5079" + ], + [ + "gene_synonym", + "NP_415088.1" + ], + [ + "gene_synonym", + "Rz" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75719" + ], + [ + "gene_synonym", + "b0556" + ], + [ + "gene_synonym", + "rzpD" + ], + [ + "gene_synonym", + "ybcT" + ] + ], + "dna_sequence": "GTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACGCAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACGGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAAAACAACTGGAAGGAACCCAGAAGTATATTAATGAGCAGTGCAGATAG", + "dna_sequence_length": 462, + "functions": [ + "DLP12 prophage", + "putative murein endopeptidase" + ], + "id": "CDS_549", + "location": [ + [ + "NC_000913", + 578107, + "+", + 462 + ] + ], + "md5": "64c5c16d3c5d9b387f2bb8e2096a5c84", + "parent_gene": "", + "protein_md5": "ebc80aa28f9230792eda55bb85c27643", + "protein_translation": "MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285031" + ], + [ + "gene_synonym", + "ECK0548" + ], + [ + "gene_synonym", + "EcoGene:EG14380" + ], + [ + "gene_synonym", + "GI:94541098" + ], + [ + "gene_synonym", + "GeneID:1450242" + ], + [ + "gene_synonym", + "JW5080" + ], + [ + "gene_synonym", + "Rz1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58041" + ], + [ + "gene_synonym", + "YP_588440.1" + ], + [ + "gene_synonym", + "b4510" + ], + [ + "gene_synonym", + "rzoD" + ] + ], + "dna_sequence": "ATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACGGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGA", + "dna_sequence_length": 183, + "functions": [ + "DLP12 prophage", + "putative lipoprotein" + ], + "id": "CDS_550", + "location": [ + [ + "NC_000913", + 578327, + "+", + 183 + ] + ], + "md5": "9f4d49efec0f42336889d327497d1a0b", + "parent_gene": "", + "protein_md5": "571fd64737ab0d7fddcd9f88b3d2b3a6", + "protein_translation": "MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPRPPAWIMQPPPDWQTPLNGIISPSERG", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001902" + ], + [ + "gene_synonym", + "ECK0549" + ], + [ + "gene_synonym", + "EcoGene:EG13637" + ], + [ + "gene_synonym", + "GI:16128540" + ], + [ + "gene_synonym", + "GeneID:948980" + ], + [ + "gene_synonym", + "JW0546" + ], + [ + "gene_synonym", + "NP_415089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77330" + ], + [ + "gene_synonym", + "b0557" + ], + [ + "gene_synonym", + "borD" + ], + [ + "gene_synonym", + "iss" + ], + [ + "gene_synonym", + "ybcU" + ] + ], + "dna_sequence": "ATGAAAAAAATGCTACTCGCTACTGCGCTGGCCCTGCTTATTACAGGATGTGCTCAACAGACATTTACTGTTCAAAACAAACAGACAGCAGTAGCACCAAAGGAAACCATCACCCATCATTTCTTCGTTTCTGGAATTGGGCAGAAGAAAACTGTCGATGCAGCTAAAATTTGTGGCGGCGCAGAAAATGTTGTTAAAACAGAAACCCAGCAAACATTCGTAAATGGATTGCTCGGTTTTATTACTTTAGGCATTTATACTCCGCTGGAAGCGCGTGTGTATTGCTCAAAATAA", + "dna_sequence_length": 294, + "functions": [ + "DLP12 prophage", + "putative lipoprotein" + ], + "id": "CDS_551", + "location": [ + [ + "NC_000913", + 578893, + "-", + 294 + ] + ], + "md5": "90c11681ad87500544c43430bfb51835", + "parent_gene": "", + "protein_md5": "cfa64b33fc7cc3fa7ebc37b118fa2130", + "protein_translation": "MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001907" + ], + [ + "gene_synonym", + "ECK0550" + ], + [ + "gene_synonym", + "EcoGene:EG13638" + ], + [ + "gene_synonym", + "GI:90111149" + ], + [ + "gene_synonym", + "GeneID:945178" + ], + [ + "gene_synonym", + "JW5081" + ], + [ + "gene_synonym", + "NP_415090.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77598" + ], + [ + "gene_synonym", + "b0558" + ], + [ + "gene_synonym", + "ybcV" + ] + ], + "dna_sequence": "ATGGCTCAGGTTGCCATTTTTAAAGAAATATTCGATCAAGTGCGAAAAGATTTAAACTGTGAATTGTTTTATTCTGAACTAAAACGTCACAATGTCTCACATTATATTTACTATCTAGCCACAGATAATATTCACATTGTGTTAGAAAACGATAACACCGTGTTAATAAAAGGACTTAAAAAGGTTGTAAATGTTAAATTCTCAAGAAATACGCATCTTATAGAAACGTCCTATGATAGGTTGAAATCAAGAGAAATCACATTTCAGCAATACAGGGAAAATCTTGCTAAAGCAGGAGTTTTCCGATGGATTACAAATATCCACGAACATAAAAGATATTACTATACCTTTGATAATTCATTACTATTTACTGAGAGCATTCAGAACACTACACAAATCTTTCCACGCTAA", + "dna_sequence_length": 411, + "functions": [ + "DLP12 prophage", + "uncharacterized protein" + ], + "id": "CDS_552", + "location": [ + [ + "NC_000913", + 579594, + "-", + 411 + ] + ], + "md5": "a1506570625baf55a5942dc5083f1fcb", + "parent_gene": "", + "protein_md5": "1a90d7a38f6da8566f7f9bf9520819ed", + "protein_translation": "MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001912" + ], + [ + "gene_synonym", + "ECK0551" + ], + [ + "gene_synonym", + "EcoGene:EG13639" + ], + [ + "gene_synonym", + "GI:16128542" + ], + [ + "gene_synonym", + "GeneID:945175" + ], + [ + "gene_synonym", + "JW0548" + ], + [ + "gene_synonym", + "NP_415091.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64435" + ], + [ + "gene_synonym", + "b0559" + ], + [ + "gene_synonym", + "ybcW" + ] + ], + "dna_sequence": "ATGAATAAAGAACAATCTGCTGATGATCCCTCCGTGGATCTGATTCGTGTAAAAAATATGCTTAATAGCACCATTTCTATGAGTTACCCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGA", + "dna_sequence_length": 207, + "functions": [ + "DLP12 prophage", + "uncharacterized protein" + ], + "id": "CDS_553", + "location": [ + [ + "NC_000913", + 579880, + "+", + 207 + ] + ], + "md5": "8593ff1b25cd744de1bf8d483fa272ac", + "parent_gene": "", + "protein_md5": "b69b9897f934ef5644e27f3d00e67ddb", + "protein_translation": "MNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4399" + ], + [ + "gene_synonym", + "EcoGene:EG14444" + ], + [ + "gene_synonym", + "GI:145698229" + ], + [ + "gene_synonym", + "GeneID:5061499" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A607" + ], + [ + "gene_synonym", + "YP_001165309.1" + ], + [ + "gene_synonym", + "b4589" + ], + [ + "gene_synonym", + "ylcI" + ] + ], + "dna_sequence": "ATGTCAACTAAGAACAGAACCCGCAGAACAACAACCCGCAACATCCGCTTTCCTAACCAAATGATTGAACAAATTAACATCGCTCTTGAGCAAAAAGGGTCCGGGAATTTCTCAGCCTGGGTCATTGAAGCCTGCCGTCGGAGGCTAACGTCAGAAAAGAGAGCATATACATCAATTAAAAGTGATGAAGAATGA", + "dna_sequence_length": 195, + "functions": [ + "DUF3950 family protein, DLP12 prophage" + ], + "id": "CDS_554", + "location": [ + [ + "NC_000913", + 580445, + "-", + 195 + ] + ], + "md5": "554b0aa80ca08928551443304a53760e", + "parent_gene": "", + "protein_md5": "5d97d2777e08fec02a3f219327d2b5f7", + "protein_translation": "MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLTSEKRAYTSIKSDEE", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001915" + ], + [ + "gene_synonym", + "ECK0552" + ], + [ + "gene_synonym", + "EcoGene:EG11635" + ], + [ + "gene_synonym", + "GI:16128543" + ], + [ + "gene_synonym", + "GeneID:945172" + ], + [ + "gene_synonym", + "JW0549" + ], + [ + "gene_synonym", + "NP_415092.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31062" + ], + [ + "gene_synonym", + "b0560" + ], + [ + "gene_synonym", + "nohB" + ], + [ + "gene_synonym", + "nohD" + ] + ], + "dna_sequence": "ATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGCTGCAGGCCAGCGAGACAGATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGATGCACAGGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATATCGAACAGTCAGGTTAA", + "dna_sequence_length": 546, + "functions": [ + "DLP12 prophage", + "DNA packaging protein" + ], + "id": "CDS_555", + "location": [ + [ + "NC_000913", + 580834, + "+", + 546 + ] + ], + "md5": "77c0111ac9f4d6eaebb300e11a6caad6", + "parent_gene": "", + "protein_md5": "d93480540713da4a78216d152b99a34e", + "protein_translation": "MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4439" + ], + [ + "gene_synonym", + "EcoGene:EG14346" + ], + [ + "gene_synonym", + "GeneID:5625560" + ], + [ + "gene_synonym", + "aaaD" + ], + [ + "gene_synonym", + "b4634" + ], + [ + "gene_synonym", + "ylcF" + ] + ], + "dna_sequence": "GTGAATATATCGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACTGTTCAGGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCTTATT", + "dna_sequence_length": 309, + "id": "CDS_556", + "location": [ + [ + "NC_000913", + 581354, + "+", + 309 + ] + ], + "md5": "130d58b554e30754358795f328c09c6c", + "parent_gene": "", + "protein_md5": "07954ea687290e8752f327d47e876fac", + "protein_translation": "VNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKESAYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTLI", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001917" + ], + [ + "gene_synonym", + "ECK0553" + ], + [ + "gene_synonym", + "EcoGene:EG13640" + ], + [ + "gene_synonym", + "GeneID:945171" + ], + [ + "gene_synonym", + "JW5815" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77699" + ], + [ + "gene_synonym", + "b0561" + ], + [ + "gene_synonym", + "tfaD" + ], + [ + "gene_synonym", + "ybcX" + ] + ], + "dna_sequence": "ATTCCAGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTAGCGTCAGGGGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGTACAGCCTGGGTGAAAGATGCAGAAGCAGAAAAACTGTTCCGGATTCGGGAGGCGGAAGAAACAAAAAACAGCCTGATGCAGGTAGCCAGTGAGCATATTGCGCCACTTCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAAACCTCATTGCTGGAAGCCTGGAAAAAATATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAA", + "dna_sequence_length": 438, + "id": "CDS_557", + "location": [ + [ + "NC_000913", + 581660, + "+", + 438 + ] + ], + "md5": "ca806a1aa45c8b7e1c00de2f54acbc8a", + "parent_gene": "", + "protein_md5": "1751149cb5ed16990811d80d338fc5aa", + "protein_translation": "IPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001919" + ], + [ + "gene_synonym", + "ECK0554" + ], + [ + "gene_synonym", + "EcoGene:EG13641" + ], + [ + "gene_synonym", + "GeneID:945170" + ], + [ + "gene_synonym", + "JW0551" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77460" + ], + [ + "gene_synonym", + "b0562" + ], + [ + "gene_synonym", + "ybcY" + ] + ], + "dna_sequence": "ATAAAAAAAAACACAGATGATGGGGCTAGAATTTACACACCACTTACCCTAAAGCTTTATGACTGGTGGGTTTTGGGAGTATCAAATCGGCTTGCATGGGGATGTCCTACAAAGGAACACCTTCTTCCACACTTTCTGGAACATTTAGGTAACAACCATCTGGATATTGGTGTTGGAACTGGGTTTTACCTTACTCACGTACCTGAGAGTAGTCTGATATCTTTAATGGATTTGAACGAAGCTAGCCTGAACGCGGCATCTACAAGGGCTGGGGAATCAAAAATTAAACATAAAATTAGCCATGATGTTTTTGAACCTTATCCCGCGGCGTTACATGGTCAATTTGATTCCATTTCCATGTCTTACCTTCTTCACTGCCTGCCTGGAAATATATCTACAAAAAGCTGTGTAATACGCAATGCGGCGCAGGCCTTAACTGACGATGGAACTCTATACGGAGCCACAATTCTTGGCGATGGAGTTGTGCACAATAGCTTCGGTCAAAAACTGATGCGCATTTACAATCAGAAAGGCATCTTTTCAAACACAAAAGATTCCGAAGAAGGCTTAACACATATACTCTCAGAGCATTTCGAGAATGTTAAAACCAAGGTTCAAGGTACTGTAGTAATGTTTTCCGCTTCAGGAAAAAAATAG", + "dna_sequence_length": 657, + "id": "CDS_558", + "location": [ + [ + "NC_000913", + 582806, + "-", + 4 + ], + [ + "NC_000913", + 582804, + "-", + 653 + ] + ], + "md5": "210e86af1ff15bf5a6ab5a67b87ee024", + "parent_gene": "", + "protein_md5": "68c9847b02a90aeb4ac91a8c517e84c2", + "protein_translation": "IKKNTDDGARIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001926" + ], + [ + "gene_synonym", + "ECK0555" + ], + [ + "gene_synonym", + "EcoGene:EG14317" + ], + [ + "gene_synonym", + "GeneID:945183" + ], + [ + "gene_synonym", + "JW0552" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77087" + ], + [ + "gene_synonym", + "b0563" + ], + [ + "gene_synonym", + "tfaX" + ], + [ + "gene_synonym", + "ylcE" + ] + ], + "dna_sequence": "ACCACACAGTTCTACATCCAGGAATTCAGTGAGTATATTGCGCCACTGCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAAAGATCGTTGCTGGAAGCCTGAAAAAAGTATCGGGTGCTGCTAAACCGTGTGGACACTTCCGTAGCACCAGATATCGAGTGGCTTATTCAACCATAA", + "dna_sequence_length": 183, + "id": "CDS_559", + "location": [ + [ + "NC_000913", + 582953, + "+", + 183 + ] + ], + "md5": "99eebb1867b209c39602dcdb99181652", + "parent_gene": "", + "protein_md5": "a0002d8a3d7dc6bb5f6ca085fd31a925", + "protein_translation": "TTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEA", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001929" + ], + [ + "gene_synonym", + "ECK0556" + ], + [ + "gene_synonym", + "EcoGene:EG10050" + ], + [ + "gene_synonym", + "GI:16128547" + ], + [ + "gene_synonym", + "GeneID:948797" + ], + [ + "gene_synonym", + "JW0553" + ], + [ + "gene_synonym", + "NP_415096.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05052" + ], + [ + "gene_synonym", + "appY" + ], + [ + "gene_synonym", + "b0564" + ] + ], + "dna_sequence": "ATGGATTATGTTTGCTCCGTAGTTTTCATCTGTCAATCATTTGATTTAATTATAAACAGGAGAGTTATCTCGTTCAAAAAAAATTCATTGTTTATTGTAAGCGACAAAATTAGAAGGGAGTTACCAGTATGCCCCTCTAAACTAAGAATTGTTGATATAGATAAGAAAACATGTTTATCCTTTTTTATCGACGTGAATAATGAGCTGCCTGGCAAATTTACTCTTGATAAGAATGGCTATATTGCTGAAGAGGAACCTCCATTATCGCTTGTTTTTTCTCTGTTTGAAGGGATTAAAATAGCAGACTCACACTCCCTTTGGTTAAAAGAAAGACTATGTATATCCTTACTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACAAATATAAATACATTTACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGA", + "dna_sequence_length": 750, + "functions": [ + "global transcriptional activator", + "DLP12 prophage" + ], + "id": "CDS_560", + "location": [ + [ + "NC_000913", + 583681, + "+", + 750 + ] + ], + "md5": "f2cc3a96feaf28fa28dde93ac8dad0ad", + "parent_gene": "", + "protein_md5": "49ec9875d4a0ff98a7001277fa34c6df", + "protein_translation": "MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGVTDGINKTID", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001931" + ], + [ + "gene_synonym", + "ECK0557" + ], + [ + "gene_synonym", + "EcoGene:EG10673" + ], + [ + "gene_synonym", + "GI:16128548" + ], + [ + "gene_synonym", + "GeneID:945185" + ], + [ + "gene_synonym", + "JW0554" + ], + [ + "gene_synonym", + "NP_415097.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09169" + ], + [ + "gene_synonym", + "b0565" + ], + [ + "gene_synonym", + "ompT" + ] + ], + "dna_sequence": "ATGCGGGCGAAACTTCTGGGAATAGTCCTGACAACCCCTATTGCGATCAGCTCTTTTGCTTCTACCGAGACTTTATCGTTTACTCCTGACAACATAAATGCGGACATTAGTCTTGGAACTCTGAGCGGAAAAACAAAAGAGCGTGTTTATCTAGCCGAAGAAGGAGGCCGAAAAGTCAGTCAACTCGACTGGAAATTCAATAACGCTGCAATTATTAAAGGTGCAATTAATTGGGATTTGATGCCCCAGATATCTATCGGGGCTGCTGGCTGGACAACTCTCGGCAGCCGAGGTGGCAATATGGTCGATCAGGACTGGATGGATTCCAGTAACCCCGGAACCTGGACGGATGAAAGTAGACACCCTGATACACAACTCAATTATGCCAACGAATTTGATCTGAATATCAAAGGCTGGCTCCTCAACGAACCCAATTACCGCCTGGGACTCATGGCCGGATATCAGGAAAGCCGTTATAGCTTTACAGCCAGAGGTGGTTCCTATATCTACAGTTCTGAGGAGGGATTCAGAGATGATATCGGCTCCTTCCCGAATGGAGAAAGAGCAATCGGCTACAAACAACGTTTTAAAATGCCCTACATTGGCTTGACTGGAAGTTATCGTTATGAAGATTTTGAACTCGGTGGCACATTTAAATACAGCGGCTGGGTGGAATCATCTGATAACGATGAACACTATGACCCGGGAAAAAGAATCACTTATCGCAGTAAGGTCAAAGACCAAAATTACTATTCTGTTGCAGTCAATGCAGGTTATTACGTCACACCTAACGCAAAAGTTTATGTTGAAGGCGCATGGAATCGGGTTACGAATAAAAAAGGTAATACTTCACTTTATGATCACAATAATAACACTTCAGACTACAGCAAAAATGGAGCAGGTATAGAAAACTATAACTTCATCACTACTGCTGGTCTTAAGTACACATTTTAA", + "dna_sequence_length": 954, + "functions": [ + "DLP12 prophage", + "outer membrane protease VII", + "outer membrane protein 3b" + ], + "id": "CDS_561", + "location": [ + [ + "NC_000913", + 585633, + "-", + 954 + ] + ], + "md5": "504b514126a585a672b65363e26eceab", + "parent_gene": "", + "protein_md5": "77f9e93fe5de27017f7ed8d046edb071", + "protein_translation": "MRAKLLGIVLTTPIAISSFASTETLSFTPDNINADISLGTLSGKTKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTWTDESRHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYEDFELGGTFKYSGWVESSDNDEHYDPGKRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRVTNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001935" + ], + [ + "gene_synonym", + "ECK0558" + ], + [ + "gene_synonym", + "EcoGene:EG10268" + ], + [ + "gene_synonym", + "GI:16128549" + ], + [ + "gene_synonym", + "GeneID:949114" + ], + [ + "gene_synonym", + "JW0555" + ], + [ + "gene_synonym", + "NP_415098.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10805" + ], + [ + "gene_synonym", + "b0566" + ], + [ + "gene_synonym", + "envY" + ] + ], + "dna_sequence": "ATGCAATTGAGCAGCAGTGAACCTTGCGTGGTGATCCTGACCGAAAAAGAGGTAGAGGTAAGCGTCAATAACCATGCTACGTTTACCCTTCCGAAAAACTACCTGGCCGCCTTCGCGTGCAACAATAACGTCATTGAACTCTCAACGTTAAATCACGTATTAATCACCCACATCAACCGTAACATCATCAACGATTATCTGTTGTTTTTAAATAAGAACTTAACCTGTGTAAAGCCCTGGTCGCGGCTGGCAACCCCGGTTATCGCTTGTCATAGCCGTACACCGGAAGTGTTCCGGCTAGCCGCCAACCACAGCAAGCAGCAACCCAGCAGACCCTGCGAAGCGGAGTTGACGCGCGCATTGCTTTTTACCGTATTGTCTAACTTTCTTGAGCAATCGCGGTTTATTGCCCTACTGATGTATATCTTACGCAGCAGCGTCCGCGACAGCGTCTGCCGCATTATTCAAAGCGATATTCAGCATTACTGGAATCTGCGAATTGTCGCCAGTTCGCTATGTTTAAGCCCCAGCCTGCTCAAAAAGAAATTAAAAAACGAAAATACCAGCTATAGCCAGATTGTCACAGAGTGTCGTATGCGTTACGCCGTACAGATGTTATTGATGGATAACAAAAATATCACTCAGGTGGCGCAATTATGTGGCTATAGCAGCACGTCGTACTTTATCTCTGTTTTTAAGGCGTTTTACGGCCTGACACCGTTGAATTATCTCGCCAAACAGCGACAAAAAGTGATGTGGTGA", + "dna_sequence_length": 762, + "functions": [ + "porin thermoregulatory transcriptional activator" + ], + "id": "CDS_562", + "location": [ + [ + "NC_000913", + 586908, + "-", + 762 + ] + ], + "md5": "7962d1c3352b8648387fb1a292b789e2", + "parent_gene": "", + "protein_md5": "7a9032c7970bb8e17097873f9200f00f", + "protein_translation": "MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSRPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001937" + ], + [ + "gene_synonym", + "ECK0559" + ], + [ + "gene_synonym", + "EcoGene:EG12448" + ], + [ + "gene_synonym", + "GI:16128550" + ], + [ + "gene_synonym", + "GeneID:945186" + ], + [ + "gene_synonym", + "JW0556" + ], + [ + "gene_synonym", + "NP_415099.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37325" + ], + [ + "gene_synonym", + "b0567" + ], + [ + "gene_synonym", + "ybcH" + ] + ], + "dna_sequence": "ATGCGTAAGTTCATTTTCGTATTGCTGACACTGCTTTTGGTCAGCCCTTTTTCCTTTGCGATGAAAGGTATTATCTGGCAACCACAAAACCGAGATAGTCAGGTTACCGATACCCAGTGGCAGGGGCTGATGAGTCAGTTACGTTTGCAAGGCTTCGATACCCTTGTTTTGCAATGGACCCGTTACGGCGATGCATTTACCCAGCCAGAACAGCGCACGTTATTGTTTAAGCGGGCCGCAGCTGCGCAACAGGCTGGTCTGAAGCTTATTGTCGGGCTGAACGCCGATCCGGAATTTTTTATGCACCAGAAACAGTCGTCCGCAGCGCTGGAAAGCTATCTTAATCGCCTGCTGGCTGCCGATCTCCAGCAAGCCAGATTATGGAGCGCCGCGCCTGGCATAACGCCGGATGGCTGGTACATCAGCGCGGAAATTGACGACCTGAACTGGCGCAGCGAAGCCGCCCGTCAGCCTTTGCTAACATGGTTAAACAACGCGCAGCGGCTGATTAGCGATGTTTCAGCAAAACCGGTTTATATCAGTAGTTTTTTCGCCGGAAACATGTCGCCCGATGGCTATCGCCAACTGCTGGAACACGTTAAAGCAACCGGCGTTAATGTCTGGGTACAGGATGGCAGCGGCGTGGATAAACTGACCGCTGAACAGCGTGAACGTTATTTACAGGCCAGCGCCGATTGCCAAAGTCCCGCCCCTGCCAGCGGCGTTGTTTATGAACTTTTTGTCGCCGGCAAAGGCAAAACCTTTACAGCGAAACCGAAACCGGACGCAGAAATTGCCTCGCTGTTAGCGAAACGTTCCTCTTGCGGTAAAGACACTCTCTATTTCTCTCTGCGCTATTTGCCCGTCGCGCACGGCATTCTCGAGTATTAA", + "dna_sequence_length": 891, + "functions": [ + "PRK09936 family protein" + ], + "id": "CDS_563", + "location": [ + [ + "NC_000913", + 587981, + "-", + 891 + ] + ], + "md5": "33c61b7e0a3b9a3d4d336a6ce061c8eb", + "parent_gene": "", + "protein_md5": "4f904c2e71c90e728478ed471c1a5322", + "protein_translation": "MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001939" + ], + [ + "gene_synonym", + "ECK0560" + ], + [ + "gene_synonym", + "EcoGene:EG11740" + ], + [ + "gene_synonym", + "GI:16128551" + ], + [ + "gene_synonym", + "GeneID:944741" + ], + [ + "gene_synonym", + "JW0557" + ], + [ + "gene_synonym", + "NP_415100.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31600" + ], + [ + "gene_synonym", + "b0568" + ], + [ + "gene_synonym", + "nfrA" + ] + ], + "dna_sequence": "ATGAAGGAGAATAACCTTAATCGCGTCATCGGATGGTCTGGTTTACTGCTGACGTCTTTATTGAGTACCAGCGCACTCGCAGACAATATCGGCACCAGCGCAGAAGAGCTGGGGCTGAGCGATTATCGCCATTTTGTTATTTATCCCCGTCTCGATAAAGCGCTGAAGGCACAGAAAAATAACGACGAAGCAACCGCCATCCGCGAATTTGAATATATACACCAGCAGGTGCCGGATAATATTCCGCTGACTTTATACCTTGCGGAAGCCTATCGCCATTTTGGTCATGATGACCGGGCGCGGCTGTTGCTTGAGGATCAACTGAAACGTCACCCAGGAGATGCCCGACTTGAGCGCAGTCTGGCGGCTATTCCGGTTGAAGTGAAAAGCGTTACGACAGTTGAAGAACTGCTTGCCCAGCAAAAAGCGTGCGATGCTGCGCCGACCCTGCGTTGTCGCAGTGAAGTCGGGCAGAATGCCCTGCGGCTGGCACAGTTACCTGTCGCCAGAGCGCAACTGAACGATGCGACGTTTGCTGCATCGCCGGAAGGAAAAACGCTGCGAACCGATCTGCTGCAACGGGCAATCTACCTGAAACAATGGTCCCAGGCAGATACGCTATACAATGAAGCACGCCAGCAGAACACATTAAGCGCGGCAGAACGCCGTCAGTGGTTTGACGTGCTTCTTGCCGGGCAGCTGGACGATCGGATCCTGGCACTGCAATCACAGGGGATCTTCACCGATCCTCAGTCATATATTACTTACGCGACCGCGCTGGCTTATCGTGGCGAAAAAGCACGCCTCCAGCATTATCTCATTGAAAATAAGCCACTATTTACCACGGACGCACAAGAGAAAAGTTGGCTCTATCTGTTATCTAAATACAGCGCTAACCCCGTTCAGGCGTTGGCGAATTATACGGTACAGTTTGCCGACAACCGCCAGTATGTTGTTGGCGCGACGCTACCGGTGCTGTTAAAAGAAGGTCAGTACGACGCAGCGCAAAAACTGCTCGCCACCCTCCCCGCCAATGAAATGCTTGAGGAGCGTTATGCTGTCAGCGTGGCGACCCGTAACAAGGCTGAAGCTCTGCGTCTGGCACGATTGCTGTATCAGCAAGAACCGGCAAATCTTACCCGCCTGGATCAACTAACCTGGCAACTGATGCAGAACGAGCAGTCACGCGAAGCTGCCGATTTATTGCTGCAACGCTATCCTTTCCAGGGCGATGCGCGTGTCAGCCAGACTTTAATGGCGCGACTGGCGTCTCTGCTGGAAAGTCATCCTTACCTGGCAACGCCGGCGAAGGTGGCGATTTTATCGAAACCCTTACCGCTGGCGGAGCAACGTCAGTGGCAAAGTCAGTTGCCGGGTATTGCAGATAATTGCCCGGCAATAGTTCGCTTGCTGGGCGATATGTCGCCTTCCTACGATGCCGCCGCCTGGAACCGTCTGGCAAAGTGTTATCGGGACACGCTACCCGGTGTGGCGTTGTATGCATGGCTTCAGGCCGAACAACGACAACCGAGCGCCTGGCAACATCGTGCGGTAGCCTATCAGGCGTATCAGGTTGAGGACTACGCCACCGCACTGGCGGCCTGGCAGAAAATCAGTCTTCACGACATGAGCAATGAGGATCTGCTTGCTGCTGCCAATACCGCCCAGGCGGCAGGAAATGGTGCGGCTCGCGATCGCTGGCTACAACAGGCAGAAAAACGTGGACTGGGAAGCAATGCCCTCTACTGGTGGCTGCATGCGCAACGTTACATTCCTGGTCAGCCGGAACTCGCACTGAACGATCTCACGCGCTCAATCAATATTGCGCCTTCTGCCAACGCTTACGTTGCGCGGGCGACAATTTATCGCCAACGTCATAATGTCCCGGCCGCGGTGAGTGATTTGCGCGCCGCGCTGGAACTGGAACCGAATAATAGCAACACCCAGGCAGCGCTTGGTTACGCCTTGTGGGATAGCGGTGATATCGCACAGTCGCGGGAAATGCTCGAACCGGCGCATAAAGGGCTTCCGGACGATCCGGCACTGATCCGACAACTGGCCTACGTGAACCAGCGTCTGGATGACATGCCTGCGACGCAGCACTACGCCCGGCTGGTGATTGATGACATTGATAATCAGGCGCTGATAACCCCACTGACCCCAGAACAAAATCAACAACGCTTCAATTTCCGCCGTTTGCATGAGGAGGTCGGTCGCCGCTGGACGTTCAGTTTCGATTCTTCCATCGGCTTGCGTTCCGGCGCAATGAGTACCGCTAACAATAATGTCGGCGGCGCAGCGCCAGGGAAAAGCTATCGTAGCTACGGACAACTGGAAGCCGAGTACCGCATCGGACGCAATATGCTGCTGGAAGGCGACCTGCTCTCAGTTTATAGCCGCGTCTTTGCCGATACCGGAGAAAACGGGGTGATGATGCCGGTGAAAAATCCGATGTCCGGCACCGGTCTGCGCTGGAAGCCGCTGCGCGATCAGATCTTTTTCATCGCCGTCGAACAGCAGTTGCCGCTGAACGGCCAAAATGGCGCATCCGATACCATGCTGCGCGCCAGCGCCTCATTCTTTAATGGCGGCAAATACAGCGACGAATGGCACCCGAACGGTTCAGGCTGGTTTGCCCAAAACCTGTACCTCGATGCGGCGCAATATATCCGCCAGGATATTCAGGCGTGGACGGCAGATTATCGCGTCAGCTGGCATCAGAAGGTAGCTAACGGACAGACTATTGAGCCTTACGCTCACGTTCAGGACAACGGCTATCGTGATAAAGGCACTCAGGGCGCGCAGCTTGGCGGAGTCGGGGTCCGCTGGAATATCTGGACCGGCGAGACGCACTACGACGCCTGGCCGCACAAAGTCAGTCTCGGCGTCGAGTATCAACATACCTTTAAGGCGATTAATCAACGTAACGGAGAGCGCAACAACGCGTTTCTCACCATTGGAGTGCACTGGTAA", + "dna_sequence_length": 2973, + "functions": [ + "bacteriophage N4 receptor, outer membrane subunit" + ], + "id": "CDS_564", + "location": [ + [ + "NC_000913", + 590954, + "-", + 2973 + ] + ], + "md5": "03ea32b5f62be4c3521153f0304a90b5", + "parent_gene": "", + "protein_md5": "7b6e71f1de4e505804e324932781966a", + "protein_translation": "MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRHFVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARLLLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNALRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLSAAERRQWFDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLIENKPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDAAQKLLATLPANEMLEERYAVSVATRNKAEALRLARLLYQQEPANLTRLDQLTWQLMQNEQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQRQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQRQPSAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDRWLQQAEKRGLGSNALYWWLHAQRYIPGQPELALNDLTRSINIAPSANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNTQAALGYALWDSGDIAQSREMLEPAHKGLPDDPALIRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRRWTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVYSRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFIAVEQQLPLNGQNGASDTMLRASASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQTIEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQHTFKAINQRNGERNNAFLTIGVHW", + "protein_translation_length": 990, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001942" + ], + [ + "gene_synonym", + "ECK0561" + ], + [ + "gene_synonym", + "EcoGene:EG11739" + ], + [ + "gene_synonym", + "GI:16128552" + ], + [ + "gene_synonym", + "GeneID:945849" + ], + [ + "gene_synonym", + "JW0558" + ], + [ + "gene_synonym", + "NP_415101.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA5" + ], + [ + "gene_synonym", + "b0569" + ], + [ + "gene_synonym", + "nfrB" + ] + ], + "dna_sequence": "GTGGACTGGCTTCTTGATGTTTTTGCTACCTGGCTCTACGGCTTAAAAGTAATCGCGATAACGTTAGCGGTCATCATGTTCATCAGCGGGCTGGACGATTTTTTTATTGATGTCGTCTACTGGGTACGCCGCATTAAACGCAAGTTGAGTGTTTATCGCCGCTACCCGCGAATGAGTTACCGCGAACTGTATAAACCAGATGAAAAACCGTTAGCGATTATGGTTCCGGCGTGGAATGAAACGGGCGTCATCGGCAATATGGCCGAGCTGGCGGCGACCACGCTCGACTACGAAAACTATCATATCTTTGTTGGCACCTACCCCAACGACCCCGATACTCAGCGTGATGTTGACGAAGTGTGCGCTCGCTTCCCGAATGTGCATAAGGTAGTCTGCGCGCGTCCTGGCCCCACCAGCAAAGCCGACTGTCTGAACAACGTGCTGGACGCCATCACCCAATTTGAGCGTAGCGCCAATTTCGCTTTTGCTGGTTTTATTCTGCATGACGCCGAAGATGTGATTTCACCGATGGAATTGCGTCTGTTCAACTATCTGGTCGAGCGTAAAGATCTGATTCAGATCCCGGTGTATCCGTTCGAACGCGAATGGACGCACTTCACCAGCATGACTTACATTGATGAGTTTTCAGAGCTGCATGGCAAAGATGTTCCGGTGCGTGAAGCCCTCGCCGGACAAGTGCCCAGCGCAGGCGTCGGCACCTGTTTCAGCCGCCGCGCCGTGACCGCACTGTTAGCTGACGGTGACGGTATTGCTTTCGACGTGCAGAGTCTTACTGAAGATTACGACATTGGCTTCCGCCTGAAAGAAAAAGGTATGACGGAAATTTTTGTCCGTTTTCCGGTGGTGGACGAAGCCAAAGAACGCGAGCAGCGTAAATTTTTACAGCACGCGCGGACATCAAACATGATCTGCGTGCGCGAATATTTCCCCGATACCTTTTCGACTGCGGTTCGACAAAAATCCCGCTGGATCATCGGCATTGTTTTCCAAGGCTTTAAAACCCATAAATGGACCTCCAGCCTGACGCTGAACTACTTTCTCTGGCGCGACCGCAAAGGGGCAATCAGTAACTTTGTCAGCTTCCTCGCGATGCTGGTGATGATCCAGCTTTTGCTGTTGCTGGCGTATGAAAGTTTGTGGCCCGATGCCTGGCATTTCCTTTCTATTTTCAGCGGCAGCGCATGGTTAATGACCCTGCTGTGGCTAAACTTTGGTTTGATGGTTAACCGCATCGTGCAGCGGGTGATTTTCGTTACTGGCTACTACGGCCTGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGTCGCGTGGCGTGGGATAAAACAACGCATGACTTCCCCAGCGTGACTGGCGATACCCGCTCGTTGCGCCCGTTAGGTCAAATTCTGCTGGAAAATCAGGTCATCACTGAAGAACAACTCGATACAGCACTGCGTAATCGCGTCGAAGGTCTACGCCTGGGCGGTTCAATGCTGATGCAGGGGCTGATTAGCGCCGAGCAGCTGGCACAGGCGCTGGCAGAGCAAAACGGCGTGGCGTGGGAATCCATCGATGCCTGGCAGATCCCTTCCTCGCTGATTGCCGAAATGCCGGCCTCCGTGGCGCTGCATTATGCGGTACTGCCGCTGCGTCTGGAAAATGACGAGTTAATTGTCGGCAGTGAAGATGGTATTGACCCGGTTTCGCTGGCGGCCCTGACGCGTAAAGTCGGACGCAAAGTGCGTTACGTCATTGTTCTGCGGGGACAAATTGTCACAGGGTTACGTCACTGGTATGCACGCCGACGCGGTCACGATCCGCGGGCAATGTTGTACAATGCGGTTCAGCATCAGTGGCTCACGGAACAGCAGGCCGGTGAAATCTGGCGGCAATATGTGCCGCATCAGTTCCTGTTCGCCGAAATACTGACCACGCTCGGTCATATTAATCGTTCAGCAATTAACGTGTTGTTATTGCGCCATGAACGCAGTTCTCTGCCGCTCGGCAAGTTTTTGGTCACCGAAGGCGTTATCAGCCAGGAAACGTTGGATCGCGTCCTGACAATTCAACGCGAATTACAAGTTTCGATGCAATCACTATTACTCAAAGCAGGTTTAAACACAGAACAGGTTGCGCAACTGGAGTCCGAAAATGAAGGAGAATAA", + "dna_sequence_length": 2238, + "functions": [ + "bacteriophage N4 receptor, inner membrane subunit" + ], + "id": "CDS_565", + "location": [ + [ + "NC_000913", + 593178, + "-", + 2238 + ] + ], + "md5": "ac15272b2873113e90905ae9bcf2753c", + "parent_gene": "", + "protein_md5": "13cc588c928d73fbcbc15f1ccee3d5fe", + "protein_translation": "MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE", + "protein_translation_length": 745, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001946" + ], + [ + "gene_synonym", + "ECK0562" + ], + [ + "gene_synonym", + "EcoGene:EG13642" + ], + [ + "gene_synonym", + "GI:16128553" + ], + [ + "gene_synonym", + "GeneID:945978" + ], + [ + "gene_synonym", + "JW5082" + ], + [ + "gene_synonym", + "NP_415102.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77485" + ], + [ + "gene_synonym", + "b0570" + ], + [ + "gene_synonym", + "cusS" + ], + [ + "gene_synonym", + "silS" + ], + [ + "gene_synonym", + "ybcZ" + ] + ], + "dna_sequence": "ATGGTCAGTAAGCCATTTCAGCGCCCGTTTTCGCTGGCAACCCGCCTGACCTTTTTTATCAGCCTGGCCACCATCGCGGCGTTTTTCGCCTTTGCATGGATCATGATCCACTCAGTAAAAGTTCATTTTGCCGAGCAGGATATTAATGATTTAAAAGAGATTAGCGCCACCCTTGAACGGGTACTAAATCACCCTGACGAAACGCAAGCCCGACGCTTAATGACGCTGGAAGATATCGTCAGTGGTTATTCCAATGTGTTGATTTCCCTGGCAGATAGTCAGGGTAAAACGGTGTATCACTCCCCCGGTGCGCCGGATATCCGCGAGTTTACGCGTGACGCCATACCCGATAAAGACGCTCAGGGTGGCGAGGTGTATCTCCTTTCCGGCCCGACGATGATGATGCCAGGCCACGGTCACGGGCATATGGAACACAGCAACTGGCGGATGATTAACTTGCCGGTTGGCCCGTTGGTGGACGGCAAACCGATTTATACGCTCTACATCGCGCTTTCGATCGATTTTCATCTTCATTACATAAATGATTTGATGAATAAACTTATTATGACCGCATCGGTAATCAGCATCCTGATCGTCTTTATCGTACTGTTGGCGGTACATAAAGGTCACGCGCCGATCCGCAGCGTCAGCCGTCAAATCCAGAATATTACCTCGAAAGATCTCGACGTTCGCCTCGACCCGCAGACCGTGCCCATTGAGCTGGAACAGCTGGTACTGTCGTTCAACCATATGATCGAGCGTATTGAGGATGTCTTTACCCGCCAGTCCAATTTCTCAGCGGATATCGCTCACGAAATTCGCACACCAATTACGAATCTCATAACGCAAACCGAAATCGCCCTCAGCCAGTCGCGCAGCCAGAAGGAGCTGGAAGATGTGCTCTACTCTAATCTCGAAGAGCTGACGCGAATGGCGAAAATGGTCAGCGATATGCTGTTTCTCGCTCAGGCCGATAACAACCAGCTAATCCCCGAAAAGAAAATGCTCAACCTGGCGGATGAAGTCGGCAAAGTGTTCGATTTTTTCGAGGCGTTAGCGGAAGATCGCGGCGTGGAGTTGCGGTTTGTTGGCGACAAGTGTCAGGTCGCGGGCGATCCGCTGATGCTGCGTCGGGCGCTAAGCAACCTGCTTTCGAACGCCCTGCGTTATACGCCAACCGGAGAGACAATTGTAGTGCGCTGTCAGACGGTCGATCACCTGGTGCAAGTTATCGTCGAAAACCCCGGTACGCCCATTGCGCCCGAGCACTTACCGCGATTGTTTGACCGTTTCTATCGCGTTGACCCCTCCCGCCAGCGAAAAGGTGAAGGTAGCGGTATTGGCCTGGCGATAGTGAAATCGATTGTTGTCGCGCATAAAGGCACGGTTGCGGTAACGTCGGATGCGCGGGGGACAAGGTTTGTTATCACATTACCCGCTTAA", + "dna_sequence_length": 1443, + "functions": [ + "copper-sensing histidine kinase in two-component regulatory system with CusR" + ], + "id": "CDS_566", + "location": [ + [ + "NC_000913", + 594770, + "-", + 1443 + ] + ], + "md5": "35c4d2fc2b95e9bbad517faae804cb7b", + "parent_gene": "", + "protein_md5": "d6e2741a946258d2fcd03118aa6ec827", + "protein_translation": "MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSQGKTVYHSPGAPDIREFTRDAIPDKDAQGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTPTGETIVVRCQTVDHLVQVIVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSDARGTRFVITLPA", + "protein_translation_length": 480, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001948" + ], + [ + "gene_synonym", + "ECK0563" + ], + [ + "gene_synonym", + "EcoGene:EG13851" + ], + [ + "gene_synonym", + "GI:16128554" + ], + [ + "gene_synonym", + "GeneID:945003" + ], + [ + "gene_synonym", + "JW0560" + ], + [ + "gene_synonym", + "NP_415103.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ8" + ], + [ + "gene_synonym", + "b0571" + ], + [ + "gene_synonym", + "cusR" + ], + [ + "gene_synonym", + "silR" + ], + [ + "gene_synonym", + "ylcA" + ] + ], + "dna_sequence": "ATGAAACTGTTGATTGTCGAAGATGAAAAGAAAACCGGAGAATACTTGACCAAAGGGTTAACCGAAGCCGGTTTTGTGGTCGATTTGGCCGACAACGGGCTGAATGGCTACCATCTGGCGATGACCGGTGATTATGATCTGATAATCCTCGATATTATGCTGCCGGACGTGAACGGCTGGGATATCGTGCGCATGTTACGCTCCGCCAATAAAGGGATGCCGATTCTGTTGCTTACCGCGCTTGGCACCATTGAACATCGCGTCAAGGGGCTGGAGTTGGGGGCAGATGACTACCTGGTGAAGCCATTCGCTTTTGCTGAACTGCTGGCGCGGGTGCGCACATTACTGCGGCGCGGGGCGGCGGTGATTATCGAAAGTCAGTTTCAGGTTGCCGATTTGATGGTCGATCTCGTCAGCCGCAAAGTCACCCGCAGCGGCACGCGCATCACTTTGACCAGTAAAGAGTTTACTCTGCTGGAGTTCTTCCTTCGCCATCAGGGCGAAGTGCTGCCCCGCTCGCTTATCGCCTCGCAGGTATGGGACATGAATTTTGACAGCGATACCAATGCTATTGATGTGGCGGTGAAGCGGCTGCGCGGCAAAATCGACAACGACTTTGAGCCGAAGCTAATTCAGACCGTGCGCGGCGTGGGTTACATGCTTGAGGTGCCGGATGGTCAGTAA", + "dna_sequence_length": 684, + "functions": [ + "response regulator in two-component regulatory system with CusS" + ], + "id": "CDS_567", + "location": [ + [ + "NC_000913", + 595443, + "-", + 684 + ] + ], + "md5": "a219ad3ccf28aedcc6847cf3fa5093db", + "parent_gene": "", + "protein_md5": "4dd31fadffaa9a241f38483c086aa107", + "protein_translation": "MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ", + "protein_translation_length": 227, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001958" + ], + [ + "gene_synonym", + "ECK0564" + ], + [ + "gene_synonym", + "EcoGene:EG14233" + ], + [ + "gene_synonym", + "GI:16128555" + ], + [ + "gene_synonym", + "GeneID:946288" + ], + [ + "gene_synonym", + "JW0561" + ], + [ + "gene_synonym", + "NP_415104.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77211" + ], + [ + "gene_synonym", + "b0572" + ], + [ + "gene_synonym", + "cusC" + ], + [ + "gene_synonym", + "ibeB" + ], + [ + "gene_synonym", + "silC" + ], + [ + "gene_synonym", + "ylcB" + ] + ], + "dna_sequence": "ATGTCTCCTTGTAAACTTCTGCCATTTTGTGTGGCCCTTGCGCTAACCGGTTGTTCACTGGCACCGGATTATCAGCGTCCGGCAATGCCCGTGCCGCAGCAGTTCTCACTCAGCCAGAACGGCCTGGTTAACGCAGCAGATAACTATCAGAACGCGGGCTGGCGCACCTTTTTTGTTGATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGAAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGGGCAGCGGCAGCTGGAGCGGTAATCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTGAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGCTGGGAAGCTACGGCAAGCTGCCGCAAGCGCAGACAGTAAACAGCGACAGCCTGCAAAGCGTTAAATTACCGGCGGGATTGTCGTCGCAAATCTTATTGCAGCGCCCGGATATTATGGAAGCTGAACACGCGTTAATGGCGGCTAATGCCAATATTGGCGCTGCACGCGCGGCATTTTTTCCGTCTATAAGCCTGACCAGCGGAATATCGACCGCCAGTAGCGATCTATCGTCATTATTTAACGCCAGCAGCGGGATGTGGAATTTTATACCCAAAATTGAGATCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGTCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGTTCTTTATTTGCAACCCGACAAACTTTACTTGATCTGAATTATGCCCGTCAGGTTAACGAAATTTCTTTGTATACCGCACTTGGTGGCGGTTGA", + "dna_sequence_length": 1374, + "functions": [ + "copper/silver efflux system, outer membrane component" + ], + "id": "CDS_568", + "location": [ + [ + "NC_000913", + 595600, + "+", + 1374 + ] + ], + "md5": "f249eaa64206fed14f48e67a2b70de51", + "parent_gene": "", + "protein_md5": "af77b13732daff2b30dc54da57dc0336", + "protein_translation": "MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGG", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001967" + ], + [ + "gene_synonym", + "ECK0565" + ], + [ + "gene_synonym", + "EcoGene:EG14234" + ], + [ + "gene_synonym", + "GI:16128556" + ], + [ + "gene_synonym", + "GeneID:945188" + ], + [ + "gene_synonym", + "JW0562" + ], + [ + "gene_synonym", + "NP_415105.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77214" + ], + [ + "gene_synonym", + "b0573" + ], + [ + "gene_synonym", + "cusF" + ], + [ + "gene_synonym", + "cusX" + ], + [ + "gene_synonym", + "silF" + ], + [ + "gene_synonym", + "ylcC" + ] + ], + "dna_sequence": "ATGAAAAAAGCACTGCAAGTCGCAATGTTCAGTCTGTTTACCGTTATTGGCTTTAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGAAATTAAAACCGGCGACAAAGTGGCGTTTAATTTTGTCCAGCAGGGCAACCTTTCTTTATTACAGGATATTAAAGTCAGCCAGTAA", + "dna_sequence_length": 333, + "functions": [ + "periplasmic copper- and silver-binding protein" + ], + "id": "CDS_569", + "location": [ + [ + "NC_000913", + 597131, + "+", + 333 + ] + ], + "md5": "2d2686fd5664d1a6d7d8618542903999", + "parent_gene": "", + "protein_md5": "06b26eaeff3381c46dc9050c52ac4cda", + "protein_translation": "MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001969" + ], + [ + "gene_synonym", + "ECK0566" + ], + [ + "gene_synonym", + "EcoGene:EG14235" + ], + [ + "gene_synonym", + "GI:16128557" + ], + [ + "gene_synonym", + "GeneID:945189" + ], + [ + "gene_synonym", + "JW0563" + ], + [ + "gene_synonym", + "NP_415106.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77239" + ], + [ + "gene_synonym", + "b0574" + ], + [ + "gene_synonym", + "cusB" + ], + [ + "gene_synonym", + "silB" + ], + [ + "gene_synonym", + "ylcD" + ] + ], + "dna_sequence": "ATGAAAAAAATCGCGCTTATTATCGGCAGCATGATCGCGGGCGGTATTATTTCTGCGGCAGGTTTTACCTGGGTTGCAAAGGCGGAACCGCCTGCAGAAAAAACGTCGACCGCAGAACGTAAAATCTTATTCTGGTACGACCCAATGTATCCCAATACGCGGTTCGATAAACCAGGTAAATCGCCGTTTATGGATATGGATCTGGTGCCGAAATATGCCGATGAAGAGAGTTCTGCGTCTGGTGTGCGCATTGACCCGACTCAGACGCAGAATCTGGGGGTGAAAACGGCTACCGTCACGCGCGGACCGCTGACTTTTGCCCAGAGTTTCCCGGCGAATGTCAGTTACAACGAGTATCAGTATGCCATTGTGCAGGCTCGCGCTGCCGGGTTTATCGACAAGGTGTATCCGCTTACCGTGGGCGATAAAGTACAAAAGGGCACACCGCTTCTCGACCTGACCATTCCTGACTGGGTGGAAGCGCAGAGTGAGTATTTACTGCTGCGCGAAACCGGCGGTACGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCACCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTCGCAGTTTACCCTCACCGTTCCGGCGCGACCGGATAAAACACTCACCATCCGCAAATGGACGCTGCTACCTGGCGTGGATGCCGCGACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAACAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCTGATTGATTCCGAAGCCAATATTTCTGGCGCACTGGAGCGGATGCGCTCTGAAAGTGCTACCCATGCGCATTGA", + "dna_sequence_length": 1224, + "functions": [ + "copper/silver efflux system, membrane fusion protein" + ], + "id": "CDS_570", + "location": [ + [ + "NC_000913", + 597479, + "+", + 1224 + ] + ], + "md5": "36c07f738056d4ec31db8fadeeca84e8", + "parent_gene": "", + "protein_md5": "f26d2821d008f1aeab38380a4876cf5f", + "protein_translation": "MKKIALIIGSMIAGGIISAAGFTWVAKAEPPAEKTSTAERKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH", + "protein_translation_length": 407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001971" + ], + [ + "gene_synonym", + "ECK0567" + ], + [ + "gene_synonym", + "EcoGene:EG12367" + ], + [ + "gene_synonym", + "GI:16128558" + ], + [ + "gene_synonym", + "GeneID:945191" + ], + [ + "gene_synonym", + "JW0564" + ], + [ + "gene_synonym", + "NP_415107.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38054" + ], + [ + "gene_synonym", + "b0575" + ], + [ + "gene_synonym", + "cusA" + ], + [ + "gene_synonym", + "silA" + ], + [ + "gene_synonym", + "ybdE" + ] + ], + "dna_sequence": "ATGATTGAATGGATTATTCGTCGCTCGGTGGCGAACCGTTTTTTGGTGCTGATGGGCGCGTTGTTTCTGAGCATCTGGGGCACCTGGACCATCATTAATACGCCAGTGGATGCGCTGCCGGATCTCTCCGATGTGCAGGTTATTATTAAAACCAGCTATCCCGGTCAGGCACCACAAATCGTTGAAAATCAGGTGACTTATCCGCTAACCACCACCATGTTGTCGGTGCCTGGCGCGAAGACTGTGCGCGGTTTCTCACAGTTTGGCGACTCTTATGTGTATGTCATTTTCGAAGATGGCACCGATCCGTACTGGGCGCGTTCGCGGGTGCTGGAGTACCTCAACCAGGTACAGGGTAAGCTGCCTGCGGGAGTCAGCGCCGAGCTGGGGCCAGATGCCACGGGTGTTGGCTGGATCTATGAATATGCACTGGTGGATCGCAGCGGTAAGCACGATCTGGCCGATTTACGCTCATTACAGGACTGGTTTCTCAAATATGAGCTGAAAACCATCCCTGACGTTGCGGAAGTGGCGTCGGTGGGCGGTGTGGTGAAAGAGTATCAGGTGGTTATCGATCCCCAGCGCCTGGCGCAGTATGGCATCAGTCTCGCCGAAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTATTGTCATGCACTTCCAGGGACTGAATGCCAATATTATGTCGTTGGGTGGCATTGCGATTGCCGTCGGGGCGATGGTCGATGCTGCTATCGTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTGCTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGATCCTGATGGGCTACTGGATCCGTGGCAAAATTCCGCCGGAAAGCAGTAACCCGCTCAATCGCTTTTTGATTCGTGTTTATCATCCGCTGTTGCTGAAAGTACTGCACTGGCCGAAAACCACGCTGCTGGTGGCGGCGCTTTCGGTGCTGACGGTTCTCTGGCCGCTCAATAAAGTTGGCGGGGAATTTTTACCGCAGATCAATGAAGGCGACTTGTTGTATATGCCATCGACGCTGCCGGGGATTTCCGCAGCAGAGGCGGCGAGTATGCTGCAAAAAACCGACAAGCTAATTATGAGCGTACCTGAAGTGGCGCGGGTATTTGGCAAAACCGGGAAAGCGGAAACCGCCACCGATTCTGCTCCGCTGGAGATGGTAGAAACGACCATCCAGCTTAAGCCGCAGGAGCAGTGGCGGCCAGGCATGACGATGGACAAAATCATTGAGGAACTGGATAACACCGTGCGGCTGCCGGGGCTGGCGAATCTGTGGGTGCCGCCAATTCGTAACCGTATCGATATGCTCTCAACCGGCATTAAAAGCCCCATCGGCATTAAAGTTTCCGGCACTGTGCTGGCGGATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCAACGTTGAGATTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATATCGATGCCCGCGATCGTGACATGGTGTCGGTGGTTCACGATTTGCAAAAAGCGATAGCTGAAAAAGTGCAGTTAAAACCGGGCACCAGCGTGGCATTCTCCGGGCAGTTCGAGCTACTGGAGCGCGCCAACCATAAGCTTAAACTCATGGTGCCGATGACGTTGATGATTATCTTCGTGCTGTTGTATCTGGCGTTCCGTCGGGTGGGCGAAGCGTTGCTGATTATCAGCAGCGTACCGTTTGCGCTGGTGGGCGGCATCTGGTTGCTGTGGTGGATGGGCTTTCATCTTTCCGTGGCGACGGGCACTGGCTTTATCGCCCTCGCCGGGGTCGCCGCCGAATTTGGCGTGGTGATGCTGATGTATTTACGTCACGCCATAGAGGCCGTGCCGTCGTTGAATAATCCACAAACATTCAGCGAGCAGAAGCTGGATGAGGCGTTATATCACGGCGCGGTCCTGCGCGTGCGCCCGAAAGCGATGACGGTGGCGGTGATTATCGCCGGTCTGCTGCCGATTCTGTGGGGAACGGGGGCTGGTTCAGAGGTGATGAGCCGGATTGCCGCGCCGATGATTGGCGGCATGATCACCGCACCTTTGCTGTCGCTGTTTATTATCCCGGCGGCGTATAAGCTGATGTGGCTGCACCGACATCGGGTACGGAAATAA", + "dna_sequence_length": 3144, + "functions": [ + "copper/silver efflux system, membrane component" + ], + "id": "CDS_571", + "location": [ + [ + "NC_000913", + 598714, + "+", + 3144 + ] + ], + "md5": "05a4519422d434badeeffb8707ab416b", + "parent_gene": "", + "protein_md5": "92dbcf9a481b2bf5f4dd8dbff085f95f", + "protein_translation": "MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITLADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFIIPAAYKLMWLHRHRVRK", + "protein_translation_length": 1047, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001976" + ], + [ + "gene_synonym", + "ECK0568" + ], + [ + "gene_synonym", + "EcoGene:EG10708" + ], + [ + "gene_synonym", + "GI:16128559" + ], + [ + "gene_synonym", + "GeneID:945199" + ], + [ + "gene_synonym", + "JW0565" + ], + [ + "gene_synonym", + "NP_415108.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24207" + ], + [ + "gene_synonym", + "b0576" + ], + [ + "gene_synonym", + "pheP" + ] + ], + "dna_sequence": "GTGAAAAACGCGTCAACCGTATCGGAAGATACTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTCCGGCTGTATTGCTGGGCTACGGCGTCGCCGGGATCATCGCTTTCCTGATTATGCGCCAGCTTGGCGAAATGGTGGTTGAGGAGCCGGTATCCGGTTCATTTGCCCACTTTGCCTATAAATACTGGGGACCGTTTGCGGGCTTCCTCTCTGGCTGGAACTACTGGGTAATGTTCGTGCTGGTGGGAATGGCAGAGCTGACCGCTGCGGGCATCTATATGCAGTACTGGTTCCCGGATGTTCCAACGTGGATTTGGGCTGCCGCCTTCTTTATTATCATCAACGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGCGGTAATTATGTTCTCCTTCGGCGGTCTGGAGCTGATTGGGATTACTGCCGCTGAAGCGCGCGATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGTTTGGTCTGCTGATGGCGCTGGTGGTAGCAACGCTGCTGTTGAACTGGATTATGATCTGTCTGGCGCATCTGCGTTTTCGTGCAGCGATGCGACGTCAGGGGCGTGAAACACAGTTTAAGGCGCTGCTCTATCCGTTCGGCAACTATCTCTGCATTGCCTTCCTCGGCATGATTTTGCTGCTGATGTGCACGATGGATGATATGCGCTTGTCAGCGATCCTGCTGCCGGTGTGGATTGTATTCCTGTTTATGGCATTTAAAACGCTGCGTCGGAAATAA", + "dna_sequence_length": 1377, + "functions": [ + "phenylalanine transporter" + ], + "id": "CDS_572", + "location": [ + [ + "NC_000913", + 601959, + "+", + 1377 + ] + ], + "md5": "de352c20e5ed2bb3c7c983c368fd39aa", + "parent_gene": "", + "protein_md5": "c01e52570bc428020ce975b55bfd4c97", + "protein_translation": "MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFMAFKTLRRK", + "protein_translation_length": 458, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001978" + ], + [ + "gene_synonym", + "ECK0569" + ], + [ + "gene_synonym", + "EcoGene:EG12620" + ], + [ + "gene_synonym", + "GI:16128560" + ], + [ + "gene_synonym", + "GeneID:946243" + ], + [ + "gene_synonym", + "JW0566" + ], + [ + "gene_synonym", + "NP_415109.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAT4" + ], + [ + "gene_synonym", + "b0577" + ], + [ + "gene_synonym", + "mscM" + ], + [ + "gene_synonym", + "ybdG" + ] + ], + "dna_sequence": "ATGCAGGATTTAATATCCCAGGTTGAAGATTTAGCGGGTATTGAGATCGATCACACCACCTCGATGGTGATGATTTTCGGTATTATTTTTCTGACCGCCGTCGTGGTGCATATTATTTTGCATTGGGTGGTACTGCGGACCTTCGAAAAACGTGCCATCGCCAGTTCACGGCTTTGGTTGCAAATCATTACCCAGAATAAACTCTTCCACCGTTTAGCTTTTACCCTGCAGGGGATTATCGTCAATATTCAGGCGGTATTCTGGCTGCAAAAAGGCACCGAAGCGGCAGATATTCTGACTACCTGCGCGCAGTTGTGGATCATGATGTATGCGCTGCTTTCAGTCTTCTCGTTGCTGGATGTTATTTTGAATCTGGCGCAGAAATTCCCGGCAGCATCTCAGTTACCGCTGAAAGGGATATTTCAGGGGATTAAACTGATCGGCGCGATTCTGGTCGGCATTTTGATGATCTCGCTGCTGATTGGTCAGTCGCCAGCGATTCTGATCAGCGGTCTTGGTGCAATGGCTGCCGTGCTGATGTTGGTATTTAAAGATCCGATTCTTGGTCTGGTGGCAGGTATTCAGCTTTCCGCGAACGATATGCTGAAACTGGGCGACTGGCTGGAGATGCCGAAATACGGCGCGGATGGCGCGGTGATCGATATTGGGTTAACCACCGTCAAAGTGCGTAACTGGGACAATACCATTACCACTATTCCCACCTGGTCTCTGGTTTCTGACTCCTTTAAAAACTGGAGCGGGATGTCAGCATCTGGCGGGCGACGTATTAAGCGCAGTATCAGTATTGATGTCACCAGTATTCGTTTTCTTGATGAAGACGAAATGCAACGTCTGAATAAAGCGCATTTGTTAAAGCCTTATTTAACCAGCCGCCATCAGGAAATTAATGAGTGGAATCGCCAGCAAGGTTCTACGGAGTCGGTATTAAATCTGCGCCGAATGACCAATATTGGAACCTTTCGTGCCTATCTGAACGAATATCTGCGTAACCATCCGCGGATTCGTAAAGATATGACCTTAATGGTACGCCAACTGGCTCCAGGTGATAACGGTTTACCGCTCGAGATCTACGCGTTTACTAACACCGTGGTGTGGCTGGAATATGAAAGCATTCAGGCTGATATATTCGATCACATATTTGCGATTGTCGAAGAGTTTGGTCTGCGACTTCATCAGTCGCCAACCGGCAATGATATTCGCTCTCTGGCGGGTGCATTTAAGCAGTAA", + "dna_sequence_length": 1248, + "functions": [ + "mechanosensitive channel protein, miniconductance" + ], + "id": "CDS_573", + "location": [ + [ + "NC_000913", + 604663, + "-", + 1248 + ] + ], + "md5": "b985c3ea2ac8abb0ed5d17451c9a61ae", + "parent_gene": "", + "protein_md5": "ce163b9d313c84677e27b85a4257e144", + "protein_translation": "MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001981" + ], + [ + "gene_synonym", + "ECK0570" + ], + [ + "gene_synonym", + "EcoGene:EG20151" + ], + [ + "gene_synonym", + "GI:16128561" + ], + [ + "gene_synonym", + "GeneID:945778" + ], + [ + "gene_synonym", + "JW0567" + ], + [ + "gene_synonym", + "NP_415110.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38489" + ], + [ + "gene_synonym", + "b0578" + ], + [ + "gene_synonym", + "dprA" + ], + [ + "gene_synonym", + "nfnB" + ], + [ + "gene_synonym", + "nfsB" + ], + [ + "gene_synonym", + "nfsI" + ], + [ + "gene_synonym", + "ntr" + ] + ], + "dna_sequence": "ATGGATATCATTTCTGTCGCCTTAAAGCGTCATTCCACTAAGGCATTTGATGCCAGCAAAAAACTTACCCCGGAACAGGCCGAGCAGATCAAAACGCTACTGCAATACAGCCCATCCAGCACCAACTCCCAGCCGTGGCATTTTATTGTTGCCAGCACGGAAGAAGGTAAAGCGCGTGTTGCCAAATCCGCTGCCGGTAATTACGTGTTCAACGAGCGTAAAATGCTTGATGCCTCGCACGTCGTGGTGTTCTGTGCAAAAACCGCGATGGACGATGTCTGGCTGAAGCTGGTTGTTGACCAGGAAGATGCCGATGGCCGCTTTGCCACGCCGGAAGCGAAAGCCGCGAACGATAAAGGTCGCAAGTTCTTCGCTGATATGCACCGTAAAGATCTGCATGATGATGCAGAGTGGATGGCAAAACAGGTTTATCTCAACGTCGGTAACTTCCTGCTCGGCGTGGCGGCTCTGGGTCTGGACGCGGTACCCATCGAAGGTTTTGACGCCGCCATCCTCGATGCAGAATTTGGTCTGAAAGAGAAAGGCTACACCAGTCTGGTGGTTGTTCCGGTAGGTCATCACAGCGTTGAAGATTTTAACGCTACGCTGCCGAAATCTCGTCTGCCGCAAAACATCACCTTAACCGAAGTGTAA", + "dna_sequence_length": 654, + "functions": [ + "dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive" + ], + "id": "CDS_574", + "location": [ + [ + "NC_000913", + 605424, + "-", + 654 + ] + ], + "md5": "cfc2517836c228056552b29e5677c7be", + "parent_gene": "", + "protein_md5": "71b3ae7ca1eb03906e6892cf4f9f8c00", + "protein_translation": "MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001986" + ], + [ + "gene_synonym", + "ECK0571" + ], + [ + "gene_synonym", + "EcoGene:EG12619" + ], + [ + "gene_synonym", + "GI:16128562" + ], + [ + "gene_synonym", + "GeneID:948302" + ], + [ + "gene_synonym", + "JW5083" + ], + [ + "gene_synonym", + "NP_415111.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAT2" + ], + [ + "gene_synonym", + "b0579" + ], + [ + "gene_synonym", + "ybdF" + ] + ], + "dna_sequence": "ATGGATAAGCAATCACTGCACGAAACGGCGAAACGCCTGGCCCTTGAGTTACCCTTTGTCGAGCTTTGCTGGCCTTTTGGCCCGGAGTTCGATGTTTTTAAAATTGGCGGCAAGATTTTTATGCTGTCGTCGGAGCTACGCGGCGTCCCCTTTATCAATCTGAAGTCCGATCCACAAAAATCCCTGTTAAATCAGCAAATATACCCAAGCATTAAGCCAGGGTATCACATGAATAAAAAGCACTGGATTTCAGTGTATCCCGGCGAAGAAATCTCCGAAGCGTTACTTCGCGATCTGATCAACGATTCGTGGAATCTGGTGGTTGATGGTCTGGCTAAACGCGATCAAAAAAGAGTGCGTCCAGGCTAA", + "dna_sequence_length": 369, + "functions": [ + "DUF419 family protein" + ], + "id": "CDS_575", + "location": [ + [ + "NC_000913", + 605886, + "-", + 369 + ] + ], + "md5": "21c13c075799744be0b4cc5a18e641d9", + "parent_gene": "", + "protein_md5": "8d241ef618e7f1fecb13aacce1696495", + "protein_translation": "MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPG", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001988" + ], + [ + "gene_synonym", + "ECK0572" + ], + [ + "gene_synonym", + "EcoGene:EG13643" + ], + [ + "gene_synonym", + "GI:16128563" + ], + [ + "gene_synonym", + "GeneID:947183" + ], + [ + "gene_synonym", + "JW0569" + ], + [ + "gene_synonym", + "NP_415112.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77506" + ], + [ + "gene_synonym", + "b0580" + ], + [ + "gene_synonym", + "ybdJ" + ] + ], + "dna_sequence": "ATGAAACACCCTTTAGAAACCTTGACCACCGCAGCAGGCATTTTGCTGATGGCTTTCCTCTCTTGCCTGCTGCTGCCCGCCCCCGCACTGGGGCTGGCGCTGGCACAAAAACTGGTGACCATGTTCCATCTGATGGATCTTAGTCAGCTTTACACTTTATTGTTTTGTCTGTGGTTTTTAGTGCTGGGCGCTATTGAGTATTTTGTTCTGCGCTTTATCTGGCGACGCTGGTTCTCGCTGGCGGATTAA", + "dna_sequence_length": 249, + "functions": [ + "DUF1158 family putative inner membrane protein" + ], + "id": "CDS_576", + "location": [ + [ + "NC_000913", + 606199, + "-", + 249 + ] + ], + "md5": "2dc240ec3e2510b010066799488f4439", + "parent_gene": "", + "protein_md5": "bedd690deb4ba63bf98eb983cb274c26", + "protein_translation": "MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001992" + ], + [ + "gene_synonym", + "ECK0573" + ], + [ + "gene_synonym", + "EcoGene:EG13644" + ], + [ + "gene_synonym", + "GI:16128564" + ], + [ + "gene_synonym", + "GeneID:947246" + ], + [ + "gene_synonym", + "JW0570" + ], + [ + "gene_synonym", + "NP_415113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77213" + ], + [ + "gene_synonym", + "b0581" + ], + [ + "gene_synonym", + "ybdK" + ] + ], + "dna_sequence": "ATGCCATTACCCGATTTTCATGTTTCTGAACCTTTTACCCTCGGTATTGAACTGGAAATGCAGGTGGTTAATCCGCCGGGCTATGACTTAAGCCAGGACTCTTCAATGCTGATTGACGCGGTTAAAAATAAGATCACGGCCGGAGAGGTAAAGCACGATATCACCGAAAGTATGCTGGAGCTGGCGACGGATGTTTGCCGTGATATCAACCAGGCTGCCGGGCAGTTTTCAGCGATGCAGAAAGTCGTATTGCAGGCAGCCACAGACCATCATCTGGAAATTTGCGGCGGTGGCACGCACCCGTTTCAGAAATGGCAGCGTCAGGAGGTATGCGATAACGAACGCTATCAACGCACGCTGGAAAACTTTGGTTATCTCATTCAGCAGGCGACCGTTTTTGGTCAGCATGTCCATGTTGGCTGCGCCAGTGGCGATGACGCCATTTATTTGCTGCACGGCTTGTCACGATTTGTGCCGCACTTTATCGCCCTTTCCGCCGCGTCGCCATATATGCAGGGAACGGATACGCGTTTTGCCTCCTCACGACCGAATATTTTTTCCGCCTTTCCTGATAATGGCCCGATGCCGTGGGTCAGTAACTGGCAACAATTTGAAGCCCTGTTTCGCTGTCTGAGTTACACCACGATGATCGACAGCATTAAAGATCTGCACTGGGATATTCGCCCCAGTCCTCATTTTGGCACGGTGGAGGTTCGGGTGATGGATACCCCGTTAACCCTTAGCCACGCAGTAAATATGGCGGGATTAATTCAGGCTACCGCCCACTGGTTACTGACGGAACGCCCGTTTAAACATCAGGAAAAAGATTACCTGCTGTATAAATTCAACCGTTTCCAGGCCTGTCGCTATGGGCTTGAAGGCGTCATCACCGATCCGCACACTGGAGATCGTCGACCGCTAACGGAAGATACCTTGCGATTGCTGGAAAAAATCGCCCCTTCCGCACATAAAATTGGTGCATCGAGCGCGATTGAGGCCCTGCATCGCCAGGTCGTCAGCGGTCTGAATGAAGCGCAGCTAATGCGCGATTTCGTCGCCGATGGCGGCTCGCTGATTGGGCTGGTGAAAAAGCATTGTGAGATCTGGGCCGGTGACTAA", + "dna_sequence_length": 1119, + "functions": [ + "weak gamma-glutamyl:cysteine ligase" + ], + "id": "CDS_577", + "location": [ + [ + "NC_000913", + 607383, + "-", + 1119 + ] + ], + "md5": "4c1c8b64d770ce60fdd429fa27765fb1", + "parent_gene": "", + "protein_md5": "9f6841829a4c413f0530095c54cb8d76", + "protein_translation": "MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047279" + ], + [ + "gene_synonym", + "ECK0574" + ], + [ + "gene_synonym", + "EcoGene:EG14302" + ], + [ + "gene_synonym", + "GI:49176035" + ], + [ + "gene_synonym", + "GeneID:2847715" + ], + [ + "gene_synonym", + "JW5084" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77091" + ], + [ + "gene_synonym", + "YP_025295.1" + ], + [ + "gene_synonym", + "b4415" + ], + [ + "gene_synonym", + "hokE" + ], + [ + "gene_synonym", + "ybdY" + ] + ], + "dna_sequence": "ATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAG", + "dna_sequence_length": 153, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_578", + "location": [ + [ + "NC_000913", + 607836, + "+", + 153 + ] + ], + "md5": "92909221b3e4af2cefc68492cbdcc8c6", + "parent_gene": "", + "protein_md5": "62eb3de9aef5a0f213e6e86136e99a2a", + "protein_translation": "MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK", + "protein_translation_length": 50, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002007" + ], + [ + "gene_synonym", + "ECK0016" + ], + [ + "gene_synonym", + "EcoGene:EG40012" + ], + [ + "gene_synonym", + "GI:16128565" + ], + [ + "gene_synonym", + "GeneID:945200" + ], + [ + "gene_synonym", + "NP_415114.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF92" + ], + [ + "gene_synonym", + "b0582" + ], + [ + "gene_synonym", + "insL1" + ] + ], + "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", + "dna_sequence_length": 1113, + "functions": [ + "IS186 transposase" + ], + "id": "CDS_579", + "location": [ + [ + "NC_000913", + 608065, + "+", + 1113 + ] + ], + "md5": "3fce9c70c9584709b648ad88256d7bb8", + "parent_gene": "", + "protein_md5": "4dc27d1a21f12988eb2f603aa2b9828d", + "protein_translation": "MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002009" + ], + [ + "gene_synonym", + "ECK0575" + ], + [ + "gene_synonym", + "EcoGene:EG10262" + ], + [ + "gene_synonym", + "GI:345452717" + ], + [ + "gene_synonym", + "GeneID:945194" + ], + [ + "gene_synonym", + "JW5085" + ], + [ + "gene_synonym", + "NP_415115.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19925" + ], + [ + "gene_synonym", + "b0583" + ], + [ + "gene_synonym", + "entD" + ] + ], + "dna_sequence": "ATGAAAACTACGCATACCTCCCTCCCCTTTGCCGGACATACGCTGCATTTTGTTGAGTTCGATCCGGCGAATTTTTGTGAGCAGGATTTACTCTGGCTGCCGCACTACGCACAACTGCAACACGCTGGACGTAAACGTAAAACAGAGCATTTAGCCGGACGGATCGCTGCTGTTTATGCTTTGCGGGAATATGGCTATAAATGTGTGCCCGCAATCGGCGAGCTACGCCAACCTGTCTGGCCTGCGGAGGTATACGGCAGTATTAGCCACTGTGGGACTACGGCATTAGCCGTGGTATCTCGTCAACCGATTGGCATTGATATAGAAGAAATTTTTTCTGTACAAACCGCAAGAGAATTGACAGACAACATTATTACACCAGCGGAACACGAGCGACTCGCAGACTGCGGTTTAGCCTTTTCTCTGGCGCTGACACTGGCATTTTCCGCCAAAGAGAGCGCATTTAAGGCAAGTGAGATCCAAACTGATGCAGGTTTTCTGGACTATCAGATAATTAGCTGGAATAAACAGCAGGTCATCATTCATCGTGAGAATGAGATGTTTGCTGTGCACTGGCAGATAAAAGAAAAGATAGTCATAACGCTGTGCCAACACGATTAA", + "dna_sequence_length": 621, + "functions": [ + "phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex" + ], + "id": "CDS_580", + "location": [ + [ + "NC_000913", + 610079, + "-", + 621 + ] + ], + "md5": "13891ce9d849fdd000aced9316eb407b", + "parent_gene": "", + "protein_md5": "1c7f04a3b758e9f0e105572c9db86c96", + "protein_translation": "MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGRKRKTEHLAGRIAAVYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGTTALAVVSRQPIGIDIEEIFSVQTARELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEIQTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002014" + ], + [ + "gene_synonym", + "ECK0576" + ], + [ + "gene_synonym", + "EcoGene:EG10293" + ], + [ + "gene_synonym", + "GI:16128567" + ], + [ + "gene_synonym", + "GeneID:945193" + ], + [ + "gene_synonym", + "JW5086" + ], + [ + "gene_synonym", + "NP_415116.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05825" + ], + [ + "gene_synonym", + "b0584" + ], + [ + "gene_synonym", + "cbr" + ], + [ + "gene_synonym", + "cbt" + ], + [ + "gene_synonym", + "fep" + ], + [ + "gene_synonym", + "fepA" + ], + [ + "gene_synonym", + "feuB" + ] + ], + "dna_sequence": "ATGAACAAGAAGATTCATTCCCTGGCCTTGTTGGTCAATCTGGGGATTTATGGGGTAGCGCAGGCACAAGAGCCGACCGATACTCCTGTTTCACATGACGATACTATTGTCGTTACCGCCGCCGAGCAGAACTTACAGGCGCCTGGCGTTTCGACCATCACCGCAGATGAAATCCGCAAAAACCCGGTTGCCCGCGATGTGTCGAAGATCATCCGTACCATGCCAGGCGTTAACCTGACCGGTAACTCCACCAGTGGTCAGCGTGGGAATAACCGACAGATTGATATTCGCGGTATGGGTCCGGAAAACACGCTGATTTTGATTGACGGCAAGCCGGTAAGCAGCCGTAACTCGGTGCGTCAGGGCTGGCGTGGCGAGCGCGATACCCGTGGTGATACTTCCTGGGTGCCACCTGAAATGATTGAACGTATTGAAGTTCTGCGTGGTCCGGCAGCTGCGCGTTATGGCAACGGCGCGGCGGGCGGCGTGGTTAACATCATTACCAAAAAAGGCAGCGGCGAGTGGCACGGCTCCTGGGACGCATATTTCAATGCGCCAGAACATAAAGAGGAAGGTGCCACCAAACGCACTAACTTTAGCCTGACCGGTCCGCTGGGCGACGAATTCAGCTTCCGTTTGTATGGCAACCTCGACAAAACCCAGGCTGACGCGTGGGATATCAACCAGGGCCATCAGTCCGCGCGTGCCGGAACGTATGCCACGACGTTACCAGCCGGGCGCGAAGGGGTAATCAACAAAGATATTAATGGCGTGGTGCGCTGGGATTTCGCGCCATTGCAATCGCTGGAACTGGAAGCAGGTTACAGCCGCCAGGGTAACCTGTATGCGGGCGACACCCAGAATACCAACTCCGATTCCTATACCCGCTCGAAATATGGCGATGAAACCAACCGTCTGTATCGCCAGAACTACGCGCTGACCTGGAACGGTGGCTGGGATAACGGCGTGACCACCAGCAACTGGGTGCAGTACGAACACACCCGTAACTCGCGTATTCCGGAAGGTCTGGCGGGCGGTACCGAAGGGAAATTTAACGAAAAAGCGACACAGGATTTCGTCGATATCGATCTTGATGACGTGATGCTGCACAGCGAAGTTAACCTGCCGATTGATTTCCTCGTTAACCAGACGCTGACGCTGGGTACGGAGTGGAATCAGCAACGGATGAAGGACTTAAGTTCCAACACCCAGGCACTGACCGGAACGAATACCGGTGGCGCTATTGATGGCGTGAGTACCACCGACCGTAGCCCGTATTCAAAAGCAGAAATTTTCTCGCTGTTTGCCGAAAACAACATGGAGCTGACTGACAGCACCATCGTAACGCCGGGGCTGCGTTTCGATCATCACAGTATTGTCGGCAATAACTGGAGCCCGGCGCTGAACATATCGCAAGGTTTAGGCGATGACTTCACGCTGAAAATGGGCATCGCCCGTGCTTATAAAGCGCCGAGCCTGTACCAGACTAACCCGAACTACATTCTCTACAGTAAAGGTCAGGGTTGCTATGCCAGCGCGGGCGGCTGCTATCTGCAAGGTAACGATGACCTGAAAGCAGAAACCAGCATCAACAAAGAGATTGGTCTGGAGTTCAAACGCGACGGGTGGCTGGCGGGCGTCACCTGGTTCCGTAACGATTATCGCAATAAGATTGAAGCGGGCTATGTGGCTGTAGGGCAAAACGCAGTCGGCACCGATCTCTATCAGTGGGATAACGTGCCGAAAGCGGTGGTTGAAGGTCTGGAAGGATCGTTAAACGTACCGGTTAGCGAAACGGTGATGTGGACCAATAACATCACTTATATGCTGAAGAGTGAAAACAAAACCACGGGCGACCGTTTGTCGATCATCCCGGAGTATACGTTGAACTCAACGCTGAGCTGGCAGGCACGGGAAGATTTGTCGATGCAAACGACCTTCACCTGGTACGGCAAGCAGCAGCCGAAGAAGTACAACTATAAAGGTCAGCCAGCGGTTGGACCGGAAACCAAAGAAATTAGTCCTTACAGCATTGTTGGCCTGAGCGCGACCTGGGATGTGACGAAGAATGTCAGTCTGACCGGCGGCGTGGACAATCTGTTCGACAAACGTTTGTGGCGTGCGGGTAATGCCCAGACCACGGGCGATTTGGCAGGGGCCAACTATATCGCCGGTGCCGGGGCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGA", + "dna_sequence_length": 2241, + "functions": [ + "ferrienterobactin outer membrane transporter" + ], + "id": "CDS_581", + "location": [ + [ + "NC_000913", + 612494, + "-", + 2241 + ] + ], + "md5": "a01806e84eb88c22124e09ecf506f212", + "parent_gene": "", + "protein_md5": "94e331a303dfbb0f008f23e8051db098", + "protein_translation": "MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRKNPVARDVSKIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNTQALTGTNTGGAIDGVSTTDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYMSVNTHF", + "protein_translation_length": 746, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002019" + ], + [ + "gene_synonym", + "ECK0577" + ], + [ + "gene_synonym", + "EcoGene:EG10299" + ], + [ + "gene_synonym", + "GI:635341462" + ], + [ + "gene_synonym", + "GeneID:945181" + ], + [ + "gene_synonym", + "JW0576" + ], + [ + "gene_synonym", + "NP_415117.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13039" + ], + [ + "gene_synonym", + "b0585" + ], + [ + "gene_synonym", + "fes" + ] + ], + "dna_sequence": "GTGACGGCGTTAAAAGTAGGAAGTGAGAGCTGGTGGCAGTCGAAACATGGCCCGGAATGGCAGCGTCTGAATGACGAAATGTTTGAGGTCACTTTCTGGTGGCGTGATCCCCAAGGTTCTGAAGAATACTCGACGATAAAGCGCGTATGGGTCTACATCACTGGTGTGACCGATCACCATCAGAACAGCCAGCCCCAGTCGATGCAGCGAATTGCAGGCACTAACGTCTGGCAGTGGACGACACAACTCAATGCCAACTGGCGCGGCAGCTACTGCTTTATTCCCACCGAACGCGATGACATTTTTTCTGTACCATCCCCCGATCGCCTCGAATTGCGCGAAGGCTGGCGAAAACTATTACCCCAGGCGATAGCCGATCCGCTGAACCTACAAAGCTGGAAAGGCGGGCGAGGGCACGCTGTTTCTGCACTCGAAATGCCGCAAGCGCCTCTGCAACCGGGATGGGATTGTCCGCAAGCGCCAGAAATACCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGTCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGTTATTACCCCTGGTGAAAGCTATTGCCCCTTTTAGCGATCGTGCCGATCGCACCGTGGTTGCCGGGCAGAGTTTTGGTGGGCTTTCCGCGCTGTATGCCGGACTGCACTGGCCTGAACGCTTTGGCTGTGTATTAAGCCAGTCAGGATCGTACTGGTGGCCGCATCGGGGCGGGCAGCAAGAGGGCGTGTTACTTGAAAAGCTAAAAGCTGGTGAAGTTAGCGCCGAAGGTCTGCGCATTGTGCTGGAAGCGGGTATTCGCGAGCCGATGATCATGCGGGCCAATCAGGCGCTGTATGCGCAATTACACCCCATAAAAGAATCCATTTTCTGGCGTCAGGTTGACGGCGGACATGATGCGCTTTGTTGGCGCGGTGGCTTGATGCAGGGGCTAATCGACCTCTGGCAACCACTTTTCCATGACAGGAGTTGA", + "dna_sequence_length": 1203, + "functions": [ + "enterobactin/ferrienterobactin esterase" + ], + "id": "CDS_582", + "location": [ + [ + "NC_000913", + 612737, + "+", + 1203 + ] + ], + "md5": "77c7455cf6484a56aeb48c14986b2318", + "parent_gene": "", + "protein_md5": "402ec01192850ceaa29009b1902f7794", + "protein_translation": "MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQPQSMQRIAGTNVWQWTTQLNANWRGSYCFIPTERDDIFSVPSPDRLELREGWRKLLPQAIADPLNLQSWKGGRGHAVSALEMPQAPLQPGWDCPQAPEIPAKEIIWKSERLKKSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQPLFHDRS", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285032" + ], + [ + "gene_synonym", + "ECK0578" + ], + [ + "gene_synonym", + "EcoGene:EG14353" + ], + [ + "gene_synonym", + "GI:94541099" + ], + [ + "gene_synonym", + "GeneID:1450243" + ], + [ + "gene_synonym", + "JW0577" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18393" + ], + [ + "gene_synonym", + "YP_588441.1" + ], + [ + "gene_synonym", + "b4511" + ], + [ + "gene_synonym", + "mbtH" + ], + [ + "gene_synonym", + "ybdZ" + ] + ], + "dna_sequence": "ATGGCATTCAGTAATCCCTTCGATGATCCGCAGGGAGCGTTTTACATATTGCGCAATGCGCAGGGGCAATTCAGTCTGTGGCCGCAACAATGCGTCTTACCGGCAGGCTGGGACATTGTGTGTCAGCCGCAGTCACAGGCGTCCTGCCAGCAGTGGCTGGAAGCCCACTGGCGTACTCTGACACCGACGAATTTTACCCAGTTGCAGGAGGCACAATGA", + "dna_sequence_length": 219, + "functions": [ + "stimulator of EntF adenylation activity, MbtH-like" + ], + "id": "CDS_583", + "location": [ + [ + "NC_000913", + 613942, + "+", + 219 + ] + ], + "md5": "c1826f113eeaee30c647c48353a15cee", + "parent_gene": "", + "protein_md5": "786c1042684c5244e90cd312b3af7734", + "protein_translation": "MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002021" + ], + [ + "gene_synonym", + "ECK0579" + ], + [ + "gene_synonym", + "EcoGene:EG10264" + ], + [ + "gene_synonym", + "GI:16128569" + ], + [ + "gene_synonym", + "GeneID:945184" + ], + [ + "gene_synonym", + "JW0578" + ], + [ + "gene_synonym", + "NP_415118.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11454" + ], + [ + "gene_synonym", + "b0586" + ], + [ + "gene_synonym", + "entF" + ] + ], + "dna_sequence": "ATGAGCCAGCATTTACCTTTGGTCGCCGCACAGCCCGGCATCTGGATGGCAGAAAAACTGTCAGAATTACCCTCCGCCTGGAGCGTGGCGCATTACGTTGAGTTAACCGGAGAGGTTGATTCGCCATTACTGGCCCGCGCGGTGGTTGCCGGACTAGCGCAAGCAGATACGCTGCGGATGCGTTTTACGGAAGATAACGGCGAAGTCTGGCAGTGGGTCGATGATGCGCTGACGTTCGAACTGCCAGAAATTATCGACCTACGAACCAACATTGATCCGCACGGTACTGCGCAGGCATTAATGCAGGCGGATTTGCAACAAGATCTGCGCGTCGATAGCGGTAAACCACTGGTCTTTCATCAGCTGATACAGGTGGCGGATAACCGCTGGTACTGGTATCAGCGTTATCACCATTTGCTGGTCGATGGCTTTAGTTTCCCGGCCATTACCCGCCAGATCGCCAATATTTACTGCACATGGCTGCGTGGCGAACCAACGCCTGCTTCGCCATTTACGCCTTTCGCTGATGTAGTGGAAGAGTACCAGCAATACCGCGAAAGCGAAGCCTGGCAGCGTGATGCGGCATTCTGGGCAGAACAGCGTCGTCAACTGCCGCCGCCCGCGTCACTTTCTCCGGCACCTTTACCGGGGCGCAGCGCCTCGGCAGATATTCTGCGCCTGAAACTGGAATTTACCGACGGGGAATTCCGCCAGCTGGCTACGCAACTTTCAGGTGTGCAGCGTACCGATTTAGCCCTTGCGCTGGCAGCCTTGTGGCTGGGGCGATTGTGCAATCGTATGGACTACGCCGCCGGATTTATCTTTATGCGTCGACTGGGCTCGGCGGCGCTGACGGCTACCGGACCCGTGCTCAACGTTTTGCCGTTGGGTATTCACATTGCGGCGCAAGAAACGCTGCCGGAACTGGCAACCCGACTGGCAGCACAACTGAAAAAAATGCGTCGTCATCAACGTTACGATGCCGAACAAATTGTCCGTGACAGCGGGCGAGCGGCAGGTGATGAACCGCTGTTTGGTCCGGTACTCAATATCAAGGTATTTGATTACCAACTGGATATTCCTGATGTTCAGGCGCAAACCCATACCCTGGCAACCGGTCCGGTTAATGACCTTGAACTGGCCCTGTTCCCGGATGTACACGGTGATTTGAGTATTGAGATCCTCGCCAATAAACAGCGTTACGATGAGCCAACGTTAATCCAGCATGCTGAACGCCTGAAAATGCTGATTGCCCAGTTCGCCGCGGATCCGGCGCTGTTGTGCGGCGATGTCGATATTATGCTGCCAGGTGAGTATGCGCAGCTGGCGCAGCTCAACGCCACTCAGGTTGAGATTCCAGAAACCACGCTTAGCGCGCTGGTGGCAGAACAAGCGGCAAAAACACCGGATGCTCCGGCGCTGGCAGATGCGCGTTACCTGTTCAGCTATCGGGAAATGCGCGAGCAGGTGGTGGCGCTGGCGAATCTGCTGCGTGAGCGCGGCGTTAAACCAGGGGACAGCGTGGCGGTGGCACTACCGCGCTCGGTCTTTTTGACCCTGGCACTCCATGCGATAGTTGAAGCTGGAGCGGCCTGGCTACCGCTGGATACCGGCTATCCGGACGATCGCCTGAAAATGATGCTGGAAGATGCGCGTCCGTCGCTGTTAATTACCACCGACGATCAACTGCCGCGCTTTAGCGATGTTCCCAATTTAACAAGCCTTTGCTATAACGCCCCGCTTACACCGCAGGGCAGTGCGCCGCTGCAACTTTCACAACCGCATCACACGGCTTATATCATCTTTACCTCTGGCTCCACCGGCAGGCCGAAAGGGGTAATGGTCGGGCAGACGGCTATCGTCAACCGCCTGCTTTGGATGCAAAATCATTATCCGCTTACAGGCGAAGATGTCGTTGCCCAAAAAACGCCGTGCAGTTTTGATGTCTCGGTGTGGGAGTTTTTCTGGCCGTTTATCGCAGGGGCAAAACTGGTGATGGCTGAACCGGAAGCGCACCGCGACCCGCTCGCTATGCAGCAATTCTTTGCCGAATATGGCGTAACGACCACGCACTTTGTGCCGTCGATGCTGGCGGCATTTGTTGCCTCGCTGACGCCGCAAACCGCTCGCCAGAGTTGCGCGACGTTGAAACAGGTTTTCTGTAGTGGTGAGGCCTTACCGGCTGATTTATGCCGCGAATGGCAACAGTTAACTGGCGCGCCGTTGCATAATCTATATGGCCCGACGGAAGCGGCGGTAGATGTCAGCTGGTATCCGGCTTTTGGCGAGGAACTGGCACAGGTGCGCGGCAGCAGTGTGCCGATTGGTTATCCGGTATGGAATACGGGTCTGCGTATTCTTGATGCGATGATGCATCCGGTGCCGCCGGGTGTGGCGGGTGATCTCTATCTCACTGGCATTCAACTGGCGCAGGGCTATCTCGGACGCCCCGATCTGACCGCCAGCCGCTTTATTGCCGATCCTTTTGCCCCAGGTGAACGGATGTACCGTACCGGAGACGTTGCCCGCTGGCTGGATAACGGCGCGGTGGAGTACCTCGGGCGCAGTGATGATCAGCTAAAAATTCGCGGGCAGCGTATCGAACTGGGCGAAATCGATCGCGTGATGCAGGCGCTGCCGGATGTCGAACAAGCCGTTACCCACGCCTGTGTGATTAACCAGGCGGCTGCCACCGGTGGTGATGCGCGTCAATTGGTGGGCTATCTGGTGTCGCAATCGGGCCTGCCGTTGGATACCAGCGCATTGCAGGCGCAGCTTCGTGAAACATTGCCACCACATATGGTACCGGTGGTTCTGCTGCAACTTCCACAGTTACCACTTAGCGCCAACGGCAAGCTGGATCGCAAAGCCTTACCGTTGCCTGAACTGAAGGCACAAGCGCCAGGGCGTGCGCCGAAAGCGGGCAGTGAAACGATTATCGCCGCGGCATTCTCGTCGTTGCTGGGGTGTGACGTGCAGGATGCCGATGCTGATTTCTTCGCGCTTGGCGGTCATTCGCTACTGGCAATGAAACTGGCAGCGCAGTTAAGTCGGCAGGTTGCCCGCCAGGTGACGCCGGGGCAAGTGATGGTCGCGTCAACTGTCGCCAAACTGGCAACGATTATTGATGCTGAAGAAGACAGCACCCGGCGTATGGGATTCGAAACCATTCTGCCGTTGCGTGAAGGTAATGGCCCGACGCTGTTTTGTTTCCATCCTGCGTCCGGTTTTGCCTGGCAGTTCAGCGTGCTCTCGCGTTATCTCGATCCACAATGGTCGATTATCGGCATTCAGTCACCGCGCCCCAATGGCCCCATGCAGACGGCGGCAAACCTGGATGAAGTCTGCGAAGCGCATCTGGCAACGTTACTTGAACAACAACCGCATGGCCCTTATTACCTGCTGGGGTATTCCCTTGGCGGTACGCTGGCGCAGGGTATTGCGGCGCGACTGCGTGCCCGTGGCGAACAGGTGGCATTTCTTGGCTTGCTGGATACCTGGCCGCCAGAAACGCAAAACTGGCAGGAAAAAGAAGCTAATGGTCTGGACCCGGAAGTGCTGGCGGAGATTAACCGCGAACGCGAGGCCTTCCTGGCAGCACAGCAGGGAAGTACTTCAACGGAGTTGTTTACCACCATTGAAGGCAACTACGCTGATGCTGTGCGCCTGCTGACGACTGCTCATAGCGTACCGTTTGACGGTAAAGCGACGCTGTTTGTTGCTGAACGCACACTTCAGGAAGGTATGAGTCCCGAACGCGCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAA", + "dna_sequence_length": 3882, + "functions": [ + "enterobactin synthase multienzyme complex component, ATP-dependent" + ], + "id": "CDS_584", + "location": [ + [ + "NC_000913", + 614157, + "+", + 3882 + ] + ], + "md5": "b82f0c343227a53aa434fe720ff09d52", + "parent_gene": "", + "protein_md5": "fa4c841c1dbdbb5132415b305a9b3ffa", + "protein_translation": "MSQHLPLVAAQPGIWMAEKLSELPSAWSVAHYVELTGEVDSPLLARAVVAGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTWLRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGRSASADILRLKLEFTDGEFRQLATQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFMRRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRDSGRAAGDEPLFGPVLNIKVFDYQLDIPDVQAQTHTLATGPVNDLELALFPDVHGDLSIEILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQLNATQVEIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRFSDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAPGRAPKAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDCAHVDIISPGTFEKIGPIIRATLNR", + "protein_translation_length": 1293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002023" + ], + [ + "gene_synonym", + "ECK0580" + ], + [ + "gene_synonym", + "EcoGene:EG10297" + ], + [ + "gene_synonym", + "GI:16128570" + ], + [ + "gene_synonym", + "GeneID:945180" + ], + [ + "gene_synonym", + "JW0579" + ], + [ + "gene_synonym", + "NP_415119.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26266" + ], + [ + "gene_synonym", + "b0587" + ], + [ + "gene_synonym", + "fepE" + ] + ], + "dna_sequence": "ATGTCATCACTGAATATTAAACAGGGAAGTGACGCTCATTTTCCCGATTATCCTCTGGCGTCGCCCAGTAATAATGAAATTGATTTACTTAATCTAATCTCAGTTTTATGGCGGGCCAAAAAAACGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGCGAAAATCGACGAACTGGATTTGCATCGCGCAATTGTCGCATTGAGCGAAAAAATGAAAGCGGTTGATGACAATGCCAGTAAGAAAAAAGATGAACCGTCACTGTATACCTCCTGGACGCTAAGTTTTACCGCGCCAACCAGTGAAGAGGCGCAGACCGTTTTGAGCGGGTATATCGATTATATCTCTACGTTGGTGGTGAAAGAGTCGCTAGAAAACGTCCGTAATAAACTGGAGATCAAAACCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCGGAACTGAACGGTGAATTACGTAATCGGCAGTATCTTGTCGAGCAATTAACAAAAGCACATGTCAACGATGTGAATTTTACGCCGTTTAAATATCAGTTAAGCCCGTCATTGCCAGTGAAAAAAGACGGTCCGGGTAAGGCGATTATTGTGATCCTTTCCGCGTTGATCGGCGGGATGGTGGCTTGTGGTGGCGTGCTGTTGCGCTATGCGATGGCATCCAGAAAACAGGATGCCATGATGGCAGACCACTTAGTTTAA", + "dna_sequence_length": 1134, + "functions": [ + "regulator of length of O-antigen component of lipopolysaccharide chains" + ], + "id": "CDS_585", + "location": [ + [ + "NC_000913", + 618254, + "+", + 1134 + ] + ], + "md5": "586eda11cb626c8be1c7c091f91dc2e9", + "parent_gene": "", + "protein_md5": "f35d1a48e0a520813cf40f9a3fe89a10", + "protein_translation": "MSSLNIKQGSDAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVMAVVFAFACAGLLISFILPQKWTSAAVVTPPEPVQWQELEKSFTKLRVLDLDIKIDRTEAFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGGVLLRYAMASRKQDAMMADHLV", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002025" + ], + [ + "gene_synonym", + "ECK0581" + ], + [ + "gene_synonym", + "EcoGene:EG10295" + ], + [ + "gene_synonym", + "GI:16128571" + ], + [ + "gene_synonym", + "GeneID:945201" + ], + [ + "gene_synonym", + "JW0580" + ], + [ + "gene_synonym", + "NP_415120.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23878" + ], + [ + "gene_synonym", + "b0588" + ], + [ + "gene_synonym", + "fepC" + ] + ], + "dna_sequence": "ATGACCGAATCAGTAGCCCGTTTGCGCGGCGAACAGTTAACCCTGGGATATGGCAAATATACCGTTGCGGAAAATCTGACTGTAGAAATACCTGATGGTCACTTCACGGCAATTATCGGGCCAAATGGCTGCGGTAAATCCACGTTACTGCGTACCTTAAGCCGCCTGATGACGCCTGCTCATGGGCATGTCTGGCTGGATGGCGAGCACATTCAACATTACGCCAGTAAAGAGGTTGCACGCCGGATTGGTCTGTTGGCGCAAAATGCTACCACGCCGGGCGATATCACCGTGCAGGAGCTGGTGGCGCGTGGACGTTATCCGCATCAACCGCTGTTTACCCGCTGGCGCAAAGAGGATGAAGAAGCGGTAACGAAAGCAATGCAGGCCACGGGAATAACTCATCTGGCAGATCAAAGCGTGGATACCCTTTCTGGCGGACAACGCCAGCGAGCGTGGATCGCGATGGTGCTGGCCCAGGAAACGGCAATTATGCTGCTCGACGAACCCACGACCTGGCTGGATATCAGTCATCAGATTGATTTGCTGGAGTTGTTAAGCGAACTGAACCGCGAAAAAGGCTATACCCTGGCGGCGGTGCTGCACGATCTTAATCAGGCCTGTCGTTACGCCAGCCATTTGATTGCATTGCGGGAAGGGAAAATTGTTGCTCAGGGAGCGCCGAAGGAGATTGTCACTGCTGAACTGATTGAGCGCATTTATGGTCTGCGCTGCATGATCATTGACGATCCAGTTGCCGGAACGCCGCTTGTGGTGCCGCTCGGACGAACGGCACCTTCAACCGCAAATAGTTAA", + "dna_sequence_length": 816, + "functions": [ + "ferrienterobactin ABC transporter ATPase" + ], + "id": "CDS_586", + "location": [ + [ + "NC_000913", + 620199, + "-", + 816 + ] + ], + "md5": "9da7ba0dfb9f87db123487957821e057", + "parent_gene": "", + "protein_md5": "791f92ae0a9d676a1175a548eee6ddb5", + "protein_translation": "MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLGRTAPSTANS", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002027" + ], + [ + "gene_synonym", + "ECK0582" + ], + [ + "gene_synonym", + "EcoGene:EG10298" + ], + [ + "gene_synonym", + "GI:16128572" + ], + [ + "gene_synonym", + "GeneID:945209" + ], + [ + "gene_synonym", + "JW0581" + ], + [ + "gene_synonym", + "NP_415121.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23877" + ], + [ + "gene_synonym", + "b0589" + ], + [ + "gene_synonym", + "fepG" + ] + ], + "dna_sequence": "ATGATTTACGTCTCTCGCCGATTACTCATCACCTGTTTGCTGCTGGTTTCCGCCTGTGTGGTTGCAGGTATCTGGGGATTACGCAGCGGTGCCGTCACGCTGGAAACCTCGCAGGTATTCGCCGCGCTGATGGGCGATGCGCCGCGCAGTATGACGATGGTGGTCACCGAATGGCGTTTACCACGCGTGCTGATGGCGCTGTTGATTGGCGCAGCACTGGGCGTCAGTGGCGCGATTTTTCAGTCGCTGATGCGTAACCCGCTCGGCAGCCCTGACGTAATGGGCTTTAACACCGGGGCGTGGAGCGGCGTGCTGGTGGCGATGGTGCTGTTTGGTCAGGACCTGACGGCTATCGCGCTGTCAGCAATGGTGGGCGGCATTGTCACTTCGCTGCTGGTCTGGCTGCTCGCCTGGCGCAACGGCATCGACACCTTTCGGTTGATTATTATCGGTATCGGCGTTCGCGCCATGCTGGTGGCCTTTAATACCTGGCTGTTGCTGAAAGCGTCTTTAGAAACGGCGCTAACAGCAGGTTTGTGGAATGCCGGATCGCTCAACGGCCTGACGTGGGCAAAAACCTCGCCTTCCGCACCCATCATTATATTGATGCTCATTGCCGCCGCCTTACTGGTACGCCGGATGCGCTTGCTGGAAATGGGCGATGATACCGCGTGTGCGCTGGGCGTCAGCGTCGAACGTTCGCGTCTGTTAATGATGCTGGTTGCAGTGGTGCTTACCGCTGCGGCAACAGCGCTTGCCGGGCCGATTTCCTTTATTGCTTTAGTCGCACCGCACATTGCCCGACGCATTAGCGGCACCGCTCGCTGGGGGCTAACCCAGGCGGCGCTATGCGGGGCGCTGTTACTGCTGGCGGCCGATCTCTGCGCCCAACAACTGTTTATGCCGTATCAACTTCCGGTTGGCGTCGTTACCGTCAGCCTCGGCGGTATTTACCTTATCGTCTTGTTAATTCAGGAGTCTCGCAAAAAATGA", + "dna_sequence_length": 993, + "functions": [ + "iron-enterobactin ABC transporter permease" + ], + "id": "CDS_587", + "location": [ + [ + "NC_000913", + 621188, + "-", + 993 + ] + ], + "md5": "1f868c63de79e6f47671bac5c09c117b", + "parent_gene": "", + "protein_md5": "702a3b9bbbd18f771ced73b7cfd3fc9e", + "protein_translation": "MIYVSRRLLITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002031" + ], + [ + "gene_synonym", + "ECK0583" + ], + [ + "gene_synonym", + "EcoGene:EG10296" + ], + [ + "gene_synonym", + "GI:16128573" + ], + [ + "gene_synonym", + "GeneID:945214" + ], + [ + "gene_synonym", + "JW0582" + ], + [ + "gene_synonym", + "NP_415122.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23876" + ], + [ + "gene_synonym", + "b0590" + ], + [ + "gene_synonym", + "fepD" + ] + ], + "dna_sequence": "ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAGCCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGAGCGCCGACTGCACCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTAATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCTGGGTGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCATTGATTGTTGCCTTTACCGGCAGTCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCGGTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAGTTGCGTTTCTGGCAAGCCGGTTCGCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTGCGCTATTACTGAGTCGCGCGCTGAACAGTTTGAGCCTCGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATTGGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCAATAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCCGCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCCCTGCCCTGCTGCTGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCGGTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA", + "dna_sequence_length": 1005, + "functions": [ + "ferrienterobactin ABC transporter permease" + ], + "id": "CDS_588", + "location": [ + [ + "NC_000913", + 622189, + "-", + 1005 + ] + ], + "md5": "9e30c39a0b55e3fa339a63cabaa83aee", + "parent_gene": "", + "protein_md5": "a7ee28a873f9a0ac50b351dd1d77370b", + "protein_translation": "MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002036" + ], + [ + "gene_synonym", + "ECK0584" + ], + [ + "gene_synonym", + "EcoGene:EG11104" + ], + [ + "gene_synonym", + "GI:16128574" + ], + [ + "gene_synonym", + "GeneID:946268" + ], + [ + "gene_synonym", + "JW0583" + ], + [ + "gene_synonym", + "NP_415123.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24077" + ], + [ + "gene_synonym", + "b0591" + ], + [ + "gene_synonym", + "entS" + ], + [ + "gene_synonym", + "ybdA" + ] + ], + "dna_sequence": "ATGAATAAACAATCCTGGCTGCTTAACCTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGTGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACTGTGCCTTAATGCACTGCTGCCGGAGCCGTCATTGCTGGCAATCTATTTACTTGGTTTATGGGATGGTTTTTTCGCATCGCTTGGCGTTACGGCGCTATTGGCGGCGACACCAGCACTGGTAGGGCGTGAAAACTTAATGCAGGCCGGGGCGATCACCATGTTGACCGTGCGTCTGGGGTCGGTGATTTCGCCCATGATTGGCGGTTTATTGCTGGCGACCGGTGGCGTAGCCTGGAACTACGGGCTGGCGGCGGCGGGCACGTTTATTACCTTGCTACCGTTGTTAAGCCTTCCGGCGTTGCCACCGCCACCGCAGCCGCGTGAGCATCCGTTGAAATCATTACTGGCAGGATTTCGTTTTCTGCTTGCCAGCCCGCTGGTGGGCGGGATTGCGCTGCTGGGTGGTTTATTGACGATGGCGAGCGCGGTGCGGGTACTGTATCCGGCGCTGGCTGACAACTGGCAGATGTCAGCGGCACAGATTGGTTTTCTCTACGCGGCGATCCCGCTCGGCGCGGCTATTGGTGCGTTAACCAGCGGGAAGCTGGCACATAGTGCGCGACCAGGGTTATTGATGCTGCTCTCCACGCTGGGATCGTTCCTCGCCATTGGTCTGTTTGGCCTGATGCCGATGTGGATTTTAGGCGTGGTTTGTCTGGCGCTGTTCGGCTGGTTGAGTGCGGTCAGCTCGTTGCTGCAATACACAATGCTGCAAACGCAAACCCCGGAAGCGATGTTAGGGCGGATTAACGGTTTGTGGACGGCGCAGAACGTGACGGGCGATGCCATAGGCGCGGCGCTGCTGGGTGGTTTGGGCGCGATGATGACACCGGTTGCTTCCGCAAGCGCGAGCGGTTTTGGTTTGTTGATTATCGGCGTGTTGTTATTGCTGGTGCTGGTGGAGTTGCGACATTTTCGCCAGACGCCGCCGCAGGTGACAGCGTCCGACAGTTAA", + "dna_sequence_length": 1251, + "functions": [ + "enterobactin exporter, iron-regulated" + ], + "id": "CDS_589", + "location": [ + [ + "NC_000913", + 622300, + "+", + 1251 + ] + ], + "md5": "ff16ab9c108df7c1a266d10eb0e58653", + "parent_gene": "", + "protein_md5": "3dfaab2794194c5ef8e7c06bb2842a59", + "protein_translation": "MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLVELRHFRQTPPQVTASDS", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002038" + ], + [ + "gene_synonym", + "ECK0585" + ], + [ + "gene_synonym", + "EcoGene:EG10294" + ], + [ + "gene_synonym", + "GI:16128575" + ], + [ + "gene_synonym", + "GeneID:947538" + ], + [ + "gene_synonym", + "JW0584" + ], + [ + "gene_synonym", + "NP_415124.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEL6" + ], + [ + "gene_synonym", + "b0592" + ], + [ + "gene_synonym", + "fepB" + ] + ], + "dna_sequence": "GTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCTATTAACAGGACTTTTGCTTTCAGGAATAGCCGCAGTTCAGGCCGCTGACTGGCCGCGTCAGATTACTGACAGCCGTGGCACACATACACTGGAAAGCCAGCCGCAGCGTATTGTTTCCACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCGGCGCGACCACGCCGAATAACCGCGTCGCGGATGACCAGGGCTTTTTACGCCAGTGGAGCAAGGTGGCGAAAGAACGCAAACTGCAACGGCTCTATATCGGCGAACCGAGCGCCGAAGCCGTTGCCGCGCAAATGCCGGATCTGATTTTAATTAGCGCAACCGGCGGGGATTCGGCGCTGGCACTGTATGATCAGCTTTCCACCATCGCCCCGACATTAATCATCAATTACGACGACAAAAGCTGGCAGTCGCTGTTAACGCAACTTGGCGAAATTACCGGGCATGAGAAACAAGCGGCAGAGCGGATTGCGCAGTTTGATAAGCAACTGGCGGCGGCGAAAGAGCAAATCAAATTACCGCCGCAGCCGGTCACTGCCATTGTCTATACTGCCGCTGCACACAGTGCCAATCTCTGGACGCCAGAATCAGCACAAGGGCAGATGCTGGAACAACTCGGCTTTACGCTGGCGAAGTTACCCGCAGGGTTAAATGCCAGCCAAAGTCAGGGTAAACGCCATGACATCATTCAGCTTGGTGGGGAAAATCTGGCTGCAGGGTTAAATGGCGAGTCACTATTCCTGTTCGCCGGTGATCAGAAAGATGCCGATGCTATTTATGCTAATCCGCTGCTCGCGCACCTGCCTGCAGTACAAAACAAGCAGGTTTATGCGCTGGGAACCGAGACGTTCCGTCTGGATTACTACAGCGCCATGCAAGTGCTGGATAGGCTTAAGGCGCTGTTTTAA", + "dna_sequence_length": 957, + "functions": [ + "ferrienterobactin ABC transporter periplasmic binding protein" + ], + "id": "CDS_590", + "location": [ + [ + "NC_000913", + 624510, + "-", + 957 + ] + ], + "md5": "547438e282f6e67219a1ed88d2c530ce", + "parent_gene": "", + "protein_md5": "4349650b1b24c1481de695cff6e8a762", + "protein_translation": "MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLDRLKALF", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002047" + ], + [ + "gene_synonym", + "ECK0586" + ], + [ + "gene_synonym", + "EcoGene:EG10261" + ], + [ + "gene_synonym", + "GI:16128576" + ], + [ + "gene_synonym", + "GeneID:945511" + ], + [ + "gene_synonym", + "JW0585" + ], + [ + "gene_synonym", + "NP_415125.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEJ2" + ], + [ + "gene_synonym", + "b0593" + ], + [ + "gene_synonym", + "entC" + ], + [ + "gene_synonym", + "fepF" + ] + ], + "dna_sequence": "ATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCTTCGATGAACCGGCTGTGAACGGGGATTCGCCCGACAGTCCCTTCCAGCAAAAACTCGCCGCGCTGTTTGCCGATGCCAAAGCGCAGGGCATCAAAAATCCGGTGATGGTCGGGGCGATTCCCTTCGATCCACGTCAGCCTTCGTCGCTGTATATTCCTGAATCCTGGCAGTCGTTCTCCCGTCAGGAAAAACAAGCTTCCGCACGCCGTTTCACCCGCAGCCAGTCGCTGAATGTGGTGGAACGCCAGGCAATTCCGGAGCAAACCACGTTTGAACAGATGGTTGCCCGCGCCGCCGCACTTACCGCCACGCCGCAGGTCGACAAAGTGGTGTTGTCACGGTTGATTGATATCACCACTGACGCCGCCATTGATAGTGGCGTATTGCTGGAACGGTTGATTGCGCAAAACCCGGTTAGTTACAACTTCCATGTTCCGCTGGCTGATGGTGGCGTCCTGCTGGGGGCCAGCCCGGAACTGCTGCTACGTAAAGACGGCGAGCGTTTTAGCTCCATTCCGTTAGCCGGTTCCGCGCGTCGTCAGCCGGATGAAGTGCTCGATCGCGAAGCAGGTAATCGTCTGCTGGCGTCAGAAAAAGATCGCCATGAACATGAACTGGTGACTCAGGCGATGAAAGAGGTACTGCGCGAACGCAGTAGTGAGTTACACGTTCCTTCTTCTCCACAGCTGATCACCACGCCGACGCTGTGGCATCTCGCAACTCCCTTTGAAGGTAAAGCGAATTCGCAAGAAAACGCACTGACTCTGGCCTGTCTGCTGCATCCGACCCCCGCGCTGAGCGGTTTCCCGCATCAGGCCGCGACCCAGGTTATTGCTGAACTGGAACCGTTCGACCGCGAACTGTTTGGCGGCATTGTGGGTTGGTGTGACAGCGAAGGTAACGGCGAATGGGTGGTGACCATCCGCTGCGCGAAGCTGCGGGAAAATCAGGTGCGTCTGTTTGCCGGAGCGGGGATTGTGCCTGCGTCGTCACCGTTGGGTGAGTGGCGCGAAACAGGCGTCAAACTTTCTACCATGTTGAACGTTTTTGGATTGCATTAA", + "dna_sequence_length": 1176, + "functions": [ + "isochorismate synthase 1" + ], + "id": "CDS_591", + "location": [ + [ + "NC_000913", + 624885, + "+", + 1176 + ] + ], + "md5": "e36a18d3700edc9bb069bae236985569", + "parent_gene": "", + "protein_md5": "5b883d2a2c2e9dc076f0d304176c5452", + "protein_translation": "MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH", + "protein_translation_length": 391, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002049" + ], + [ + "gene_synonym", + "ECK0587" + ], + [ + "gene_synonym", + "EcoGene:EG10263" + ], + [ + "gene_synonym", + "GI:16128577" + ], + [ + "gene_synonym", + "GeneID:947426" + ], + [ + "gene_synonym", + "JW0586" + ], + [ + "gene_synonym", + "NP_415126.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10378" + ], + [ + "gene_synonym", + "b0594" + ], + [ + "gene_synonym", + "entE" + ] + ], + "dna_sequence": "ATGAGCATTCCATTCACCCGCTGGCCGGAAGAGTTTGCCCGTCGCTATCGGGAAAAAGGCTACTGGCAGGATTTGCCGCTGACCGACATTCTGACGCGACATGCTGCGAGTGACAGCATCGCGGTTATCGACGGCGAGCGACAGTTGAGTTATCGGGAGCTGAATCAGGCGGCGGATAACCTCGCGTGTAGTTTACGCCGTCAGGGCATTAAACCTGGTGAAACCGCGCTGGTACAACTGGGTAACGTCGCTGAATTGTATATTACCTTTTTCGCGCTGCTGAAACTGGGCGTTGCGCCGGTGCTGGCGTTGTTCAGCCATCAGCGTAGTGAACTGAACGCCTATGCCAGCCAGATTGAACCCGCATTGCTGATTGCCGATCGCCAACATGCGCTGTTTAGCGGGGATGATTTCCTCAATACTTTCGTCACAGAACATTCCTCCATTCGCGTGGTGCAACTGCTCAACGACAGCGGTGAGCATAACTTGCAGGATGCGATTAACCATCCGGCTGAGGATTTTACTGCCACGCCATCACCTGCTGATGAAGTGGCCTATTTCCAGCTTTCCGGTGGCACCACCGGCACACCGAAACTGATCCCGCGCACTCATAACGACTACTACTACAGCGTGCGTCGTAGCGTCGAGATTTGTCAGTTCACACAACAGACACGCTACCTGTGCGCGATCCCGGCGGCTCATAACTACGCCATGAGTTCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGTTTCCCATTGATTGAAAAACATCAGGTTAACGTTACCGCGCTGGTGCCACCCGCAGTCAGCCTGTGGTTGCAGGCGCTGATCGAAGGCGAAAGCCGGGCGCAGCTTGCCTCGCTGAAACTGTTACAGGTCGGCGGCGCACGTCTTTCTGCCACCCTTGCGGCGCGTATTCCCGCTGAGATTGGCTGTCAGTTGCAGCAGGTGTTTGGCATGGCGGAAGGGCTGGTGAACTACACCCGACTTGATGATAGCGCGGAGAAAATTATCCATACCCAGGGTTACCCAATGTGTCCGGATGACGAAGTATGGGTTGCCGATGCCGAAGGAAATCCACTGCCGCAAGGGGAAGTCGGACGCCTGATGACGCGCGGGCCGTACACCTTCCGCGGCTATTACAAAAGTCCACAGCACAATGCCAGCGCCTTTGATGCCAACGGTTTTTACTGTTCCGGCGATCTGATCTCTATTGATCCAGAGGGTTACATCACCGTGCAGGGGCGCGAGAAAGATCAGATTAACCGTGGCGGCGAGAAGATCGCTGCCGAAGAGATCGAAAACCTGCTGCTGCGCCACCCGGCGGTGATCTACGCCGCACTGGTGAGCATGGAAGATGAGCTGATGGGCGAAAAAAGCTGCGCTTATCTGGTGGTAAAAGAGCCGCTGCGCGCGGTGCAGGTGCGTCGTTTCCTGCGTGAACAGGGTATTGCCGAATTTAAATTACCGGATCGCGTGGAGTGTGTGGATTCACTTCCGCTGACGGCGGTCGGGAAAGTCGATAAAAAACAATTACGTCAGTGGCTGGCGTCACGCGCATCAGCCTGA", + "dna_sequence_length": 1611, + "functions": [ + "2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex" + ], + "id": "CDS_592", + "location": [ + [ + "NC_000913", + 626070, + "+", + 1611 + ] + ], + "md5": "20c1080d2268ef8056548a86bc28790a", + "parent_gene": "", + "protein_md5": "c4380653142ac6be1c2307929583d88d", + "protein_translation": "MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRASA", + "protein_translation_length": 536, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002052" + ], + [ + "gene_synonym", + "ECK0588" + ], + [ + "gene_synonym", + "EcoGene:EG10260" + ], + [ + "gene_synonym", + "GI:16128578" + ], + [ + "gene_synonym", + "GeneID:946178" + ], + [ + "gene_synonym", + "JW0587" + ], + [ + "gene_synonym", + "NP_415127.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI4" + ], + [ + "gene_synonym", + "b0595" + ], + [ + "gene_synonym", + "entB" + ], + [ + "gene_synonym", + "entG" + ] + ], + "dna_sequence": "ATGGCTATTCCAAAATTACAGGCTTACGCACTGCCGGAGTCTCACGATATTCCGCAGAATAAAGTTGACTGGGCCTTTGAACCGCAACGTGCCGCGTTGTTAATCCATGATATGCAGGACTATTTTGTCAGCTTCTGGGGCGAGAACTGCCCGATGATGGAGCAGGTGATCGCGAATATTGCTGCGCTGCGCGACTACTGCAAACAGCACAATATCCCGGTTTATTACACCGCCCAGCCGAAAGAGCAGAGCGATGAAGATCGGGCGCTGTTGAATGATATGTGGGGGCCGGGCCTGACCCGCTCGCCGGAACAGCAAAAGGTGGTGGATCGCCTGACGCCAGATGCCGACGACACGGTGCTGGTGAAGTGGCGCTACAGCGCGTTTCATCGTTCTCCGCTGGAGCAAATGCTGAAAGAGAGTGGACGTAACCAGCTGATTATTACCGGGGTATATGCCCACATTGGCTGTATGACCACCGCAACCGACGCATTTATGCGCGATATTAAACCGTTTATGGTGGCGGATGCGCTGGCCGATTTCAGCCGTGACGAGCATTTGATGTCGCTGAAATATGTGGCCGGACGTTCTGGCCGGGTGGTGATGACTGAAGAATTACTGCCAGCACCTATCCCCGCCAGCAAAGCGGCGCTGCGTGAGGTGATCCTGCCGTTGCTGGACGAGTCCGATGAACCGTTCGATGACGACAACCTGATCGACTACGGTCTGGATTCGGTGCGCATGATGGCGCTGGCGGCGCGCTGGCGCAAAGTGCATGGTGATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAA", + "dna_sequence_length": 858, + "functions": [ + "isochorismatase" + ], + "id": "CDS_593", + "location": [ + [ + "NC_000913", + 627694, + "+", + 858 + ] + ], + "md5": "67e94de3b215a8a9761d08ccfdefe248", + "parent_gene": "", + "protein_md5": "d86cbc59170ea19583ca269d1d94c5c1", + "protein_translation": "MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAALREVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSREVK", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002054" + ], + [ + "gene_synonym", + "ECK0589" + ], + [ + "gene_synonym", + "EcoGene:EG10259" + ], + [ + "gene_synonym", + "GI:16128579" + ], + [ + "gene_synonym", + "GeneID:945284" + ], + [ + "gene_synonym", + "JW0588" + ], + [ + "gene_synonym", + "NP_415128.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15047" + ], + [ + "gene_synonym", + "b0596" + ], + [ + "gene_synonym", + "entA" + ] + ], + "dna_sequence": "ATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCGAAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAACGCACGCTGTGGGTGAGCGATGACGCCGAAGAACAGCGTATTCGCGGCTTTGGCGAGCAGTTTAAACTCGGCATTCCGCTGGGGAAAATCGCCCGTCCACAAGAGATCGCCAACACGATTTTGTTCCTCGCCTCTGACCTCGCCAGCCATATTACCCTACAGGATATTGTGGTCGATGGCGGCTCAACGCTGGGGGCATAA", + "dna_sequence_length": 747, + "functions": [ + "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" + ], + "id": "CDS_594", + "location": [ + [ + "NC_000913", + 628551, + "+", + 747 + ] + ], + "md5": "400ddeb594ed9cb63c09195da3b31c44", + "parent_gene": "", + "protein_md5": "216c34eb7acfa7f37d7865ed513aaf0b", + "protein_translation": "MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGSTLGA", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002057" + ], + [ + "gene_synonym", + "ECK0590" + ], + [ + "gene_synonym", + "EcoGene:EG11105" + ], + [ + "gene_synonym", + "GI:16128580" + ], + [ + "gene_synonym", + "GeneID:945215" + ], + [ + "gene_synonym", + "JW0589" + ], + [ + "gene_synonym", + "NP_415129.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Y8" + ], + [ + "gene_synonym", + "b0597" + ], + [ + "gene_synonym", + "entH" + ], + [ + "gene_synonym", + "ybdB" + ] + ], + "dna_sequence": "ATGATCTGGAAACGCCATTTAACGCTCGACGAACTGAACGCCACCAGCGATAACACAATGGTGGCGCATCTGGGAATTGTGTATACCCGTCTGGGCGATGATGTGCTGGAAGCCGAAATGCCGGTTGATACCCGTACTCATCAGCCGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGTCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGATGA", + "dna_sequence_length": 414, + "functions": [ + "enterobactin synthesis proofreading thioesterase" + ], + "id": "CDS_595", + "location": [ + [ + "NC_000913", + 629300, + "+", + 414 + ] + ], + "md5": "1cc432a9a51f25ec4b959083000805b5", + "parent_gene": "", + "protein_md5": "e9b407cd402ef39d77772a144291a64a", + "protein_translation": "MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002061" + ], + [ + "gene_synonym", + "ECK0591" + ], + [ + "gene_synonym", + "EcoGene:EG10167" + ], + [ + "gene_synonym", + "GI:16128581" + ], + [ + "gene_synonym", + "GeneID:945213" + ], + [ + "gene_synonym", + "JW0590" + ], + [ + "gene_synonym", + "NP_415130.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15078" + ], + [ + "gene_synonym", + "b0598" + ], + [ + "gene_synonym", + "cstA" + ], + [ + "gene_synonym", + "dppG?" + ], + [ + "gene_synonym", + "ybdC" + ] + ], + "dna_sequence": "ATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCTCTGTAATGGGAGCATTTGCTCTGGGATACATTGCTTTAAATCGTGGGGAACAGATCAACGCGCTGTGGATTGTGGTGGCGTCGGTCTGTATCTATCTGATCGCTTACCGTTTTTATGGGCTGTATATCGCCAAAAATGTGCTGGCGGTTGACCCGACGCGTATGACGCCAGCGGTGCGCCATAACGACGGGCTGGACTATGTGCCGACGGACAAGAAAGTGCTGTTCGGTCACCATTTTGCGGCCATTGCCGGAGCAGGTCCGCTGGTGGGGCCGGTACTGGCGGCGCAAATGGGCTACCTGCCGGGGATGATCTGGCTGCTCGCTGGGGTGGTTCTCGCCGGTGCGGTGCAGGATTTCATGGTGCTGTTTGTTTCTACGCGCCGTGACGGTCGCTCGCTGGGTGAGCTGGTCAAAGAAGAGATGGGGCCAACCGCCGGGGTGATTGCGCTGGTGGCCTGCTTTATGATCATGGTCATTATCCTTGCAGTGCTGGCGATGATCGTGGTGAAAGCCCTGACTCATAGCCCGTGGGGAACATATACCGTTGCGTTCACCATTCCGCTGGCGCTGTTTATGGGGATCTACCTGCGCTATCTGCGTCCGGGGCGTATTGGCGAAGTGTCGGTCATCGGTCTGGTATTCCTGATTTTCGCCATTATCTCTGGCGGCTGGGTGGCAGAAAGTCCGACCTGGGCACCGTACTTTGACTTTACCGGCGTGCAGTTGACCTGGATGCTGGTGGGTTACGGTTTTGTGGCGGCGGTGCTGCCGGTGTGGTTACTGCTGGCCCCGCGTGACTACCTCTCTACCTTCCTGAAAATCGGGACTATCGTCGGTCTGGCGGTAGGCATTTTGATTATGCGCCCGACGCTGACCATGCCTGCGCTGACCAAATTTGTCGATGGCACTGGCCCGGTATGGACCGGTAACCTGTTCCCGTTCCTGTTTATCACCATCGCCTGTGGCGCGGTGTCTGGCTTCCATGCGCTGATCTCTTCTGGGACCACGCCGAAGATGCTGGCGAACGAAGGGCAGGCGTGCTTTATCGGCTACGGTGGGATGTTAATGGAATCCTTCGTGGCGATTATGGCGCTGGTTTCCGCCTGTATCATCGATCCGGGCGTGTATTTTGCCATGAACAGCCCGATGGCGGTGCTGGCTCCGGCAGGGACGGCGGATGTGGTCGCTTCTGCCGCGCAGGTGGTGAGTAGCTGGGGCTTTAGCATTACACCAGATACGCTAAACCAGATTGCCAGCGAAGTGGGTGAACAGTCGATCATTTCCCGTGCGGGCGGTGCGCCGACGCTGGCGGTGGGGATGGCCTACATTCTGCACGGCGCGCTGGGCGGCATGATGGATGTGGCGTTCTGGTATCACTTCGCCATTTTGTTTGAAGCACTGTTTATTCTGACGGCGGTGGATGCAGGTACGCGTGCTGCGCGCTTTATGTTGCAGGATCTGCTGGGCGTGGTGTCTCCTGGCCTGAAGCGGACCGATTCACTGCCTGCTAACCTGCTGGCAACAGCGCTGTGCGTACTGGCGTGGGGCTACTTCCTCCATCAGGGCGTGGTCGATCCGCTGGGCGGCATTAACACTCTGTGGCCGCTGTTTGGTATTGCCAACCAGATGCTGGCAGGGATGGCGCTGATGCTCTGTGCCGTGGTGTTGTTCAAGATGAAACGTCAACGTTACGCCTGGGTGGCGCTGGTACCAACGGCCTGGCTGCTGATTTGTACCCTGACCGCAGGCTGGCAGAAAGCGTTTAGCCCGGATGCGAAAGTCGGCTTCCTGGCCATTGCTAATAAGTTCCAGGCAATGATCGACAGCGGCAATATTCCGTCGCAGTATACTGAGTCACAGCTGGCGCAACTGGTGTTCAACAACCGTCTGGATGCCGGGTTAACCATCTTCTTTATGGTGGTCGTGGTGGTTCTGGCACTGTTCTCGATTAAGACGGCACTTGCGGCATTGAAAGATCCGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAA", + "dna_sequence_length": 2106, + "functions": [ + "carbon starvation protein involved in peptide utilization", + "APC peptide transporter family protein" + ], + "id": "CDS_596", + "location": [ + [ + "NC_000913", + 629894, + "+", + 2106 + ] + ], + "md5": "ad972ef1db3cc84ed37b960ed13809b6", + "parent_gene": "", + "protein_md5": "b9b84a95df18925b8dd5c34717a21dad", + "protein_translation": "MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETPYEPMPENVEEIVAQAKGAH", + "protein_translation_length": 701, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285033" + ], + [ + "gene_synonym", + "ECK0592" + ], + [ + "gene_synonym", + "EcoGene:EG11107" + ], + [ + "gene_synonym", + "GI:94541100" + ], + [ + "gene_synonym", + "GeneID:949021" + ], + [ + "gene_synonym", + "JW0591" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAS9" + ], + [ + "gene_synonym", + "YP_588442.1" + ], + [ + "gene_synonym", + "b4512" + ], + [ + "gene_synonym", + "ybdD" + ] + ], + "dna_sequence": "ATGTTTGATTCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAA", + "dna_sequence_length": 198, + "functions": [ + "DUF466 family protein" + ], + "id": "CDS_597", + "location": [ + [ + "NC_000913", + 632182, + "+", + 198 + ] + ], + "md5": "6ee16c62919d18423f92b2508ab0a10a", + "parent_gene": "", + "protein_md5": "95856758bc910f75b955633a0b386897", + "protein_translation": "MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002065" + ], + [ + "gene_synonym", + "ECK0593" + ], + [ + "gene_synonym", + "EcoGene:EG12692" + ], + [ + "gene_synonym", + "GI:16128582" + ], + [ + "gene_synonym", + "GeneID:945212" + ], + [ + "gene_synonym", + "JW0592" + ], + [ + "gene_synonym", + "NP_415132.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45579" + ], + [ + "gene_synonym", + "b0599" + ], + [ + "gene_synonym", + "ybdH" + ] + ], + "dna_sequence": "ATGCCTCACAATCCTATCCGCGTGGTCGTCGGCCCGGCTAACTACTTTTCACATCCAGGAAGTTTCAATCACCTGCACGATTTTTTCACTGATGAACAACTTTCTCGCGCGGTGTGGATCTACGGCAAACGCGCCATTGCTGCGGCGCAAACCAAACTTCCGCCAGCGTTTGGACTGCCAGGGGCAAAGCATATTTTGTTTCGCGGTCATTGCAGCGAAAGCGATGTACAACAACTGGCGGCTGAGTCCGGTGACGACCGCAGCGTGGTGATTGGCGTCGGTGGCGGTGCACTGCTCGACACCGCGAAAGCCCTCGCCCGCCGTCTCGGTCTGCCGTTTGTTGCCGTTCCGACGATCGCCGCCACCTGCGCCGCCTGGACACCGCTCTCCGTCTGGTATAATGATGCCGGACAGGCGCTGCATTATGAGATTTTCGACGACGCCAATTTTATGGTGCTGGTGGAACCGGAGATTATCCTCAATGCACCGCAACAATATCTGCTGGCGGGGATCGGTGACACGCTGGCGAAATGGTATGAAGCGGTGGTGCTGGCTCCGCAACCAGAAACGTTGCCGCTAACCGTGCGACTGGGGATCAATAATGCGCAAGCCATTCGCGACGTCTTGTTAAACAGTAGCGAACAGGCGCTGAGCGATCAGCAAAATCAACAGTTAACGCAATCATTTTGCGATGTGGTGGATGCTATTATTGCTGGTGGTGGGATGGTTGGTGGTCTGGGCGATCGTTTTACGCGTGTGGCGGCAGCTCATGCCGTGCATAACGGTCTGACCGTGCTGCCGCAAACCGAGAAGTTTCTCCACGGCACCAAAGTCGCCTACGGAATTCTGGTGCAAAGCGCCTTGCTGGGTCAGGATGATGTGCTGGCGCAATTAACTGGAGCGTATCAGCGTTTTCATCTGCCGACTACACTGGCGGAGCTGGAAGTGGATATCAATAATCAGGCGGAGATCGACAAAGTGATTGCCCACACCCTGCGTCCGGTGGAGTCCATTCATTACCTGCCAGTCACGCTGACACCAGATACGTTGCGTGCAGCGTTCAAAAAAGTGGAATCGTTTAAAGCCTGA", + "dna_sequence_length": 1089, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_598", + "location": [ + [ + "NC_000913", + 633477, + "-", + 1089 + ] + ], + "md5": "d8113596c9b0e77d284488ead3ba92eb", + "parent_gene": "", + "protein_md5": "ef8121bd7f52b806d5a10c194daf301a", + "protein_translation": "MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKRAIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTAKALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIILNAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALSDQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRPVESIHYLPVTLTPDTLRAAFKKVESFKA", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002069" + ], + [ + "gene_synonym", + "ECK0594" + ], + [ + "gene_synonym", + "EcoGene:EG13531" + ], + [ + "gene_synonym", + "GI:16128583" + ], + [ + "gene_synonym", + "GeneID:945211" + ], + [ + "gene_synonym", + "JW0593" + ], + [ + "gene_synonym", + "NP_415133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77806" + ], + [ + "gene_synonym", + "b0600" + ], + [ + "gene_synonym", + "ybdL" + ] + ], + "dna_sequence": "ATGACAAATAACCCTCTGATTCCACAAAGCAAACTTCCACAACTTGGCACCACTATTTTCACCCAGATGAGCGCGCTGGCGCAGCAACACCAGGCGATTAACCTGTCGCAAGGCTTTCCTGATTTTGATGGTCCGCGCTATTTACAGGAGCGGCTGGCGCACCACGTTGCACAGGGGGCAAACCAATACGCGCCCATGACCGGCGTGCAGGCCTTGCGCGAGGCGATTGCTCAGAAAACGGAACGTTTGTATGGCTATCAACCAGATGCCGATAGCGATATCACCGTAACGGCAGGGGCGACGGAAGCGTTATACGCGGCGATTACCGCACTGGTGCGCAATGGCGATGAAGTGATTTGTTTTGATCCCAGCTATGACAGTTACGCCCCCGCCATCGCGCTTTCTGGGGGAATAGTGAAGCGTATGGCACTGCAACCACCGCATTTTCGCGTTGACTGGCAGGAATTTGCCGCATTATTAAGCGAGCGCACCAGACTGGTGATCCTCAACACTCCGCATAACCCCAGTGCAACTGTCTGGCAGCAGGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCCGCAGCTGCGTGAGCGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCCGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGTGTGAAGGTACATACTTTTTGCTGGTGGATTACAGCGCGGTTTCTACCCTGGATGATGTTGAGTTTTGCCAGTGGCTGACGCAGGAGCACGGCGTAGCGGCGATTCCGCTGTCGGTGTTTTGCGCCGATCCCTTCCCACATAAACTGATTCGTCTCTGTTTTGCCAAGAAGGAATCGACGTTGCTGGCAGCAGCTGAACGCCTGCGCCAGCTTTAG", + "dna_sequence_length": 1161, + "functions": [ + "methionine aminotransferase, PLP-dependent" + ], + "id": "CDS_599", + "location": [ + [ + "NC_000913", + 633586, + "+", + 1161 + ] + ], + "md5": "a1295014cc6db6372eab0f148e5752f6", + "parent_gene": "", + "protein_md5": "f6d1510051046d56009b53e5ef373284", + "protein_translation": "MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL", + "protein_translation_length": 386, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002071" + ], + [ + "gene_synonym", + "ECK0595" + ], + [ + "gene_synonym", + "EcoGene:EG13532" + ], + [ + "gene_synonym", + "GI:16128584" + ], + [ + "gene_synonym", + "GeneID:945206" + ], + [ + "gene_synonym", + "JW0594" + ], + [ + "gene_synonym", + "NP_415134.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77174" + ], + [ + "gene_synonym", + "b0601" + ], + [ + "gene_synonym", + "ybdM" + ] + ], + "dna_sequence": "ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAAAATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGTTTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTCCGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAG", + "dna_sequence_length": 630, + "functions": [ + "Spo0J family protein, ParB-like nuclease domain" + ], + "id": "CDS_600", + "location": [ + [ + "NC_000913", + 635376, + "-", + 630 + ] + ], + "md5": "2d7e70c348681d6c85747a1ae6643193", + "parent_gene": "", + "protein_md5": "e6bcf1e8bcf9075b917451d34e0761ec", + "protein_translation": "MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002073" + ], + [ + "gene_synonym", + "ECK0596" + ], + [ + "gene_synonym", + "EcoGene:EG13533" + ], + [ + "gene_synonym", + "GI:16128585" + ], + [ + "gene_synonym", + "GeneID:945205" + ], + [ + "gene_synonym", + "JW0595" + ], + [ + "gene_synonym", + "NP_415135.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77216" + ], + [ + "gene_synonym", + "b0602" + ], + [ + "gene_synonym", + "ybdN" + ] + ], + "dna_sequence": "ATGTCTATTTATAAAATTCCTCTTCCGCTCAATATTCTGGAAGCTGCACGAGAGCGTATTACCTGGACACTCAACACCCTACCCCGCGTTTGTGTCTCATTTTCTGGCGGCAAAGACTCTGGTTTAATGCTGCATCTGACAGCCGAACTTGCCCGACAAATGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAGGCGCAATTCTCTTGCACCATTAACTATGTTCAGTCCCTGCGCGAGTTGTACACCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCACAATACCAACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTACGTCAACCTCCCCAAGATGCGATAACCGACCCTGACTTTTTCTGCTTTTACCAGCCAGGCATGACCTTCGAACAATTTGTACGTGAGTTTGCCGAATGGTTTTCACAAAAACGTCCGGCGGCGATGATGATCGGCATCCGTGCGGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGCCGACGATAAACCCTGGACTACGGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATTTACGACTGGAAAGTGGCTGATATCTGGACCTGGTATGCAAATCATCAAAGTCTCTGCAACCCACTGTATAACCTAATGTATCAGGCAGGCGTTCCTCTGCGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGACAAGGATTATGGCTCTATCACGTTATCGAACCGGATCGCTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGACAATCATTTCTATGGGCATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACAGCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAGGTTCCACAAACCCAGCAAGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGGATATGCAAAGTTTTACTCAATAACGATTACTGGTGTCGGGCATTATCATTTAGCCCCACAAAATCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGGATACTATGCAACAACGATTAA", + "dna_sequence_length": 1221, + "functions": [ + "PAPS reductase-like domain protein" + ], + "id": "CDS_601", + "location": [ + [ + "NC_000913", + 636569, + "-", + 1221 + ] + ], + "md5": "1bad6995c0ed190ee97320b776fae62d", + "parent_gene": "", + "protein_md5": "df3c6b5ec554ed6b211f05511b2303ca", + "protein_translation": "MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKSKNYQRYNERIKGKRQEWGILCNND", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002077" + ], + [ + "gene_synonym", + "ECK0597" + ], + [ + "gene_synonym", + "EcoGene:EG13534" + ], + [ + "gene_synonym", + "GI:16128586" + ], + [ + "gene_synonym", + "GeneID:945216" + ], + [ + "gene_synonym", + "JW0596" + ], + [ + "gene_synonym", + "NP_415136.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77746" + ], + [ + "gene_synonym", + "b0603" + ], + [ + "gene_synonym", + "ybdO" + ] + ], + "dna_sequence": "ATGGCCAATCTCTACGACTTGAAAAAGTTCGACTTAAATCTTCTTGTCATATTTGAGTGTATTTACCAGCATTTAAGCATTAGCAAAGCTGCTGAATCACTATATATCACCCCATCAGCCGTGAGCCAGTCGTTACAACGCTTACGTGCGCAATTTAATGACCCTTTATTCATTCGCTCAGGAAAAGGTATCGCGCCGACGACAACAGGGTTAAATCTGCATCACCATCTTGAGAAAAATCTCAGAGGCCTTGAACAAACAATTAATATAGTCAATAAGTCCGAACTAAAGAAAAACTTTATTATCTACGGCCCTCAGCTCATTTCTTGCTCTAATAATAGTATGCTGATCCGCTGCCTACGGCAAGATTCCTCTGTCGAGATTGAGTGCCATGATATCCTCATGTCAGCAGAGAATGCTGAAGAACTGTTGGTTCACCGCAAAGCCGATCTGGTGATCACCCAAATGCCAGTGATCAGCCGTTCCGTCATTTGCATGCCATTGCATACGATTCGCAATACTCTAATTTGTAGTAATAGGCATCCACGAATTACTGACAATAGCACTTATGAACAAATTATGGCAGAAGAGTTCACCCAATTAATATCTAAATCAGCAGGGGTTGATGATATTCAAATGGAAATAGACGAGAGATTTATGAATCGCAAAATCTCATTTCGTGGTTCCTCTTTGCTGACAATCATTAATAGCATTGCAGTTACAGATTTACTGGGAATAGTCCCCTATGAACTTTATAATTCCTACCGTGACTTTCTTAACTTAAAAGAGATAAAACTAGAACATCCGTTACCTTCAATAAAGCTTTACATTTCCTATAATAAATCTTCTTTAAATAATTTGGTGTTCTCCCGATTTATTGACCGTCTAAATGAGAGTTTTTGA", + "dna_sequence_length": 903, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_602", + "location": [ + [ + "NC_000913", + 637618, + "-", + 903 + ] + ], + "md5": "37b9dbf2cdea85f882d58e9929987b34", + "parent_gene": "", + "protein_md5": "6cc2134a34b3420e90011cbc846c2255", + "protein_translation": "MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002084" + ], + [ + "gene_synonym", + "ECK0598" + ], + [ + "gene_synonym", + "EcoGene:EG13535" + ], + [ + "gene_synonym", + "GI:90111151" + ], + [ + "gene_synonym", + "GeneID:945224" + ], + [ + "gene_synonym", + "JW0597" + ], + [ + "gene_synonym", + "NP_415137.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77202" + ], + [ + "gene_synonym", + "b0604" + ], + [ + "gene_synonym", + "dsbG" + ], + [ + "gene_synonym", + "ybdP" + ] + ], + "dna_sequence": "ATGTTAAAAAAGATACTTTTACTGGCTCTGCTTCCTGCAATCGCCTTCGCAGAGGAACTTCCTGCTCCAGTAAAAGCGATTGAAAAACAGGGCATTACAATCATCAAAACATTCGATGCCCCCGGAGGAATGAAAGGTTATCTCGGAAAGTATCAGGATATGGGCGTCACCATCTACCTGACTCCAGATGGTAAGCACGCTATCTCTGGTTACATGTACAACGAGAAAGGTGAAAACCTGAGTAACACACTTATCGAAAAAGAAATTTACGCACCAGCCGGACGCGAAATGTGGCAACGGATGGAACAATCCCACTGGCTCCTCGACGGTAAAAAAGATGCGCCGGTCATTGTCTACGTCTTCGCCGATCCGTTCTGCCCATATTGTAAACAGTTCTGGCAGCAGGCGCGCCCGTGGGTAGATTCTGGCAAAGTGCAATTAAGAACATTGTTGGTTGGGGTTATCAAGCCAGAAAGCCCGGCGACAGCAGCGGCAATTCTTGCCTCCAAAGATCCCGCAAAAACCTGGCAACAATATGAAGCCTCTGGTGGCAAGCTTAAGCTAAACGTGCCTGCAAACGTAAGTACAGAGCAAATGAAAGTGTTAAGTGACAATGAGAAACTGATGGACGATCTGGGGGCAAATGTCACGCCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAATAAATAA", + "dna_sequence_length": 747, + "functions": [ + "thiol:disulfide interchange protein, periplasmic" + ], + "id": "CDS_603", + "location": [ + [ + "NC_000913", + 638573, + "-", + 747 + ] + ], + "md5": "f043f2d7443bb98ba4df856ea1bab346", + "parent_gene": "", + "protein_md5": "5c09e1fccbdf2cf009b12ce39f427bbf", + "protein_translation": "MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNK", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002090" + ], + [ + "gene_synonym", + "ECK0599" + ], + [ + "gene_synonym", + "EcoGene:EG11384" + ], + [ + "gene_synonym", + "GI:16128588" + ], + [ + "gene_synonym", + "GeneID:945225" + ], + [ + "gene_synonym", + "JW0598" + ], + [ + "gene_synonym", + "NP_415138.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE08" + ], + [ + "gene_synonym", + "ahpC" + ], + [ + "gene_synonym", + "b0605" + ], + [ + "gene_synonym", + "tpx" + ] + ], + "dna_sequence": "ATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGAGCGTCTTCTTCTTCTACCCGGCTGACTTTACTTTCGTATGCCCGACCGAACTGGGTGACGTTGCTGACCACTACGAAGAACTGCAGAAACTGGGCGTAGACGTATACGCAGTATCTACCGATACTCACTTCACCCACAAAGCATGGCACAGCAGCTCTGAAACCATCGCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAA", + "dna_sequence_length": 564, + "functions": [ + "alkyl hydroperoxide reductase, C22 subunit" + ], + "id": "CDS_604", + "location": [ + [ + "NC_000913", + 638945, + "+", + 564 + ] + ], + "md5": "2ee9c52846050595f79e15d24274be6c", + "parent_gene": "", + "protein_md5": "1a3d18fa4a35b13df73e9a69b4707a58", + "protein_translation": "MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPSLDLVGKI", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002093" + ], + [ + "gene_synonym", + "ECK0600" + ], + [ + "gene_synonym", + "EcoGene:EG11385" + ], + [ + "gene_synonym", + "GI:90111152" + ], + [ + "gene_synonym", + "GeneID:947540" + ], + [ + "gene_synonym", + "JW0599" + ], + [ + "gene_synonym", + "NP_415139.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P35340" + ], + [ + "gene_synonym", + "ahpF" + ], + [ + "gene_synonym", + "b0606" + ] + ], + "dna_sequence": "ATGCTCGACACAAATATGAAAACTCAACTCAAGGCTTACCTTGAGAAATTGACCAAGCCTGTTGAGTTAATTGCCACGCTGGATGACAGCGCTAAATCGGCAGAAATCAAGGAACTGTTGGCTGAAATCGCAGAACTGTCAGACAAAGTCACCTTTAAAGAAGATAACAGCTTGCCGGTGCGTAAGCCGTCTTTCCTGATCACCAACCCAGGTTCCAACCAGGGGCCACGTTTTGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGATCGCAACGTGATGGGCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTCGATACCGTTGATATCGAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGCAAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAACGTTCCGGGCGAAGATCAGTATCGCACCAAAGGCGTGACCTACTGCCCGCACTGCGACGGCCCGCTGTTTAAAGGTAAACGCGTAGCGGTTATCGGCGGCGGTAACTCCGGCGTGGAAGCGGCAATTGACCTGGCGGGTATCGTTGAGCACGTAACGCTGCTGGAATTTGCGCCAGAAATGAAAGCCGACCAGGTTCTGCAGGACAAACTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTCGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGGCGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAA", + "dna_sequence_length": 1566, + "functions": [ + "alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding" + ], + "id": "CDS_605", + "location": [ + [ + "NC_000913", + 639753, + "+", + 1566 + ] + ], + "md5": "fa07707be56e798c3c386851a3a5f3f8", + "parent_gene": "", + "protein_md5": "8eb384eefef133abca428a2f5b50ba71", + "protein_translation": "MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKTA", + "protein_translation_length": 521, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002095" + ], + [ + "gene_synonym", + "ECK0601" + ], + [ + "gene_synonym", + "EcoGene:EG12683" + ], + [ + "gene_synonym", + "GI:16128590" + ], + [ + "gene_synonym", + "GeneID:945229" + ], + [ + "gene_synonym", + "JW0600" + ], + [ + "gene_synonym", + "NP_415140.1" + ], + [ + "gene_synonym", + "UP12" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39177" + ], + [ + "gene_synonym", + "b0607" + ], + [ + "gene_synonym", + "uspG" + ], + [ + "gene_synonym", + "ybdQ" + ], + [ + "gene_synonym", + "yzzU" + ] + ], + "dna_sequence": "ATGTATAAGACAATCATTATGCCAGTTGATGTATTTGAAATGGAATTGAGCGACAAAGCTGTTCGCCACGCTGAATTCCTCGCCCAGGATGACGGAGTTATTCATCTACTTCACGTACTACCCGGGTCAGCCAGCCTGAGCCTGCACCGTTTTGCCGCTGATGTGCGTCGTTTTGAAGAGCATCTGCAACATGAAGCACAAGAACGTCTGCAAACGATGGTCAGCCACTTCACCATCGATCCTTCCCGCATTAAACAACATGTCCGTTTTGGTAGCGTGCGGGATGAAGTCAATGAGTTGGCAGAAGAACTGGGGGCTGATGTTGTAGTTATTGGTTCTCGCAACCCATCGATTTCGACCCATCTGTTAGGTTCTAACGCCTCGAGCGTGATCCGCCACGCCAATCTGCCGGTGCTGGTTGTGCGTTAA", + "dna_sequence_length": 429, + "functions": [ + "universal stress protein UP12" + ], + "id": "CDS_606", + "location": [ + [ + "NC_000913", + 641867, + "-", + 429 + ] + ], + "md5": "0f1cd28dd800fb9c32d5e4b63eb96758", + "parent_gene": "", + "protein_md5": "c43a041181261d5f8344bb6d01bcee7b", + "protein_translation": "MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002099" + ], + [ + "gene_synonym", + "ECK0602" + ], + [ + "gene_synonym", + "EcoGene:EG13537" + ], + [ + "gene_synonym", + "GI:16128591" + ], + [ + "gene_synonym", + "GeneID:949067" + ], + [ + "gene_synonym", + "JW0601" + ], + [ + "gene_synonym", + "NP_415141.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77316" + ], + [ + "gene_synonym", + "b0608" + ], + [ + "gene_synonym", + "ybdR" + ] + ], + "dna_sequence": "ATGAAAGCATTGACTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAGGCAGATGATATTATTCTGCGTATTACGGCAACGGCGATCTGTGGCTCTGACCTCCATCTTTATCGAGGCAAAATACCTCAGGTTAAACATGGCGATATTTTTGGTCATGAATTTATGGGGGAAGTAGTTGAAACCGGAAAGGACGTAAAAAATTTGCAAAAAGGCGACCGAGTGGTAATTCCGTTCGTCATTGCTTGTGGCGACTGTTTTTTCTGTCGATTGCAACAATATGCCGCCTGCGAAAATACCAATGCGGGTAAAGGCGCTGCGCTCAATAAAAAACAGATACCAGCTCCAGCGGCATTGTTTGGTTATAGTCACCTGTATGGCGGCGTTCCTGGTGGGCAGGCGGAATATGTCCGCGTCCCTAAAGGGAATGTGGGGCCGTTTAAAGTACCGCCTTTGCTTTCAGATGATAAAGCGCTTTTCCTTTCTGATATTCTGCCAACGGCATGGCAGGCAGCAAAAAATGCGCAGATCCAACAAGGTTCAAGCGTTGCAGTCTATGGTGCTGGTCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGATTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAAGACAGCGATCCGGCACAGTCAATTATTGAACAAACGGCAGGTCACCGGGGCGTGGATGCAGTAATAGACGCCGTCGGTTTTGAAGCGAAAGGCAGCACCACGGAAACGGTGCTGACTAACCTGAAACTGGAGGGCAGCAGCGGTAAAGCGTTGCGTCAGTGTATTGCGGCGGTCAGGCGTGGCGGCATTGTTAGCGTACCGGGCGTCTACGCTGGATTTATTCACGGTTTCCTGTTTGGCGACGCCTTTGATAAAGGGTTGTCGTTTAAAATGGGACAGACCCACGTTCACGCATGGCTGGGAGAATTATTACCGTTAATTGAGAAAGGATTACTGAAACCAGAAGAAATTGTTACCCACTATATGCCGTTTGAAGAGGCCGCCCGGGGATATGAGATTTTCGAAAAACGTGAAGAGGAGTGCCGTAAGGTGATTCTGGTACCCGGTGCACAAAGCGCAGAGGCGGCGCAGAAGGCGGTTTCAGGTCTGGTGAATGCGATGCCGGGGGGAACAATATGA", + "dna_sequence_length": 1239, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_607", + "location": [ + [ + "NC_000913", + 642088, + "+", + 1239 + ] + ], + "md5": "8f252054bda0ce704c91963e86dd6694", + "parent_gene": "", + "protein_md5": "db0e2b2b3872ec3003311d116dbe7655", + "protein_translation": "MKALTYHGPHHVQVENVPDPGVEQADDIILRITATAICGSDLHLYRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRLQQYAACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLLSDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVDHHPYRLHFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTETVLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLSFKMGQTHVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQSAEAAQKAVSGLVNAMPGGTI", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002104" + ], + [ + "gene_synonym", + "ECK0603" + ], + [ + "gene_synonym", + "EcoGene:EG12637" + ], + [ + "gene_synonym", + "GI:16128593" + ], + [ + "gene_synonym", + "GeneID:947546" + ], + [ + "gene_synonym", + "JW0602" + ], + [ + "gene_synonym", + "NP_415143.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFW4" + ], + [ + "gene_synonym", + "b0610" + ], + [ + "gene_synonym", + "rnk" + ] + ], + "dna_sequence": "ATGTCCAGACCAACTATCATCATTAACGACCTGGATGCCGAACGCATCGATATTCTGCTGGAGCAACCCGCCTATGCTGGTTTGCCAATCGCCGACGCGTTAAACGCAGAGTTGGATCGCGCCCAAATGTGTTCGCCAGAAGAGATGCCACACGACGTGGTGACAATGAACAGCCGGGTTAAATTCCGCAATCTTAGCGATGGCGAAGTGCGTGTGCGCACGCTGGTGTATCCGGCAAAAATGACCGATAGCAATACTCAGCTTTCCGTTATGGCTCCGGTAGGTGCCGCACTGCTGGGGCTGCGCGTTGGCGATTCCATTCACTGGGAACTTCCGGGCGGCGTTGCAACCCACCTTGAAGTGCTGGAACTCGAATACCAGCCAGAAGCTGCTGGCGACTACCTGCTTTAA", + "dna_sequence_length": 411, + "functions": [ + "regulator of nucleoside diphosphate kinase" + ], + "id": "CDS_608", + "location": [ + [ + "NC_000913", + 643967, + "-", + 411 + ] + ], + "md5": "bcf7fa153b9584fd314612c38705704b", + "parent_gene": "", + "protein_md5": "e12fa98a49523be028e9ff30aee67f2c", + "protein_translation": "MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002107" + ], + [ + "gene_synonym", + "ECK0604" + ], + [ + "gene_synonym", + "EcoGene:EG10856" + ], + [ + "gene_synonym", + "GI:16128594" + ], + [ + "gene_synonym", + "GeneID:949065" + ], + [ + "gene_synonym", + "JW0603" + ], + [ + "gene_synonym", + "NP_415144.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21338" + ], + [ + "gene_synonym", + "b0611" + ], + [ + "gene_synonym", + "rna" + ], + [ + "gene_synonym", + "rnsA" + ] + ], + "dna_sequence": "ATGAAAGCATTCTGGCGTAACGCCGCGTTGCTCGCGGTTTCTCTGCTTCCCTTCTCTTCTGCCAACGCCTTAGCGTTGCAGGCAAAACAGTATGGCGATTTTGATCGCTATGTCCTGGCCCTCTCCTGGCAAACCGGATTTTGCCAGAGTCAACACGATCGAAATCGTAACGAACGAGATGAATGTCGCCTGCAAACCGAAACGACCAACAAAGCTGATTTTCTGACCGTACATGGTCTGTGGCCAGGATTGCCTAAATCGGTTGCTGCCCGTGGTGTTGATGAACGCCGCTGGATGCGCTTCGGTTGCGCTACTCGCCCAATCCCGAATCTACCAGAAGCGCGCGCCAGCCGAATGTGTTCATCGCCGGAAACCGGATTATCACTGGAAACGGCCGCTAAACTAAGTGAAGTCATGCCAGGAGCTGGCGGACGTTCCTGCCTGGAACGCTACGAATATGCCAAACACGGTGCCTGCTTTGGTTTTGATCCGGACGCATACTTCGGTACGATGGTACGCCTGAATCAAGAAATTAAAGAGAGCGAAGCCGGAAAATTCCTTGCGGATAATTACGGTAAAACAGTGAGCCGCCGTGACTTTGACGCCGCCTTTGCCAAAAGCTGGGGAAAAGAGAACGTGAAAGCAGTTAAGCTAACGTGCCAGGGTAACCCTGCGTATTTGACTGAAATTCAGATCTCGATCAAAGCTGACGCCATCAACGCTCCGCTTTCTGCAAACTCATTCTTGCCACAACCTCACCCAGGTAACTGTGGCAAAACCTTTGTGATTGATAAAGCGGGTTATTAA", + "dna_sequence_length": 807, + "functions": [ + "ribonuclease I" + ], + "id": "CDS_609", + "location": [ + [ + "NC_000913", + 645003, + "-", + 807 + ] + ], + "md5": "ab0f0ccda795dcf2028f28b15694d260", + "parent_gene": "", + "protein_md5": "2f6304267a8833c50e3ed177a80c66b1", + "protein_translation": "MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002110" + ], + [ + "gene_synonym", + "ECK0605" + ], + [ + "gene_synonym", + "EcoGene:EG13538" + ], + [ + "gene_synonym", + "GI:16128595" + ], + [ + "gene_synonym", + "GeneID:949070" + ], + [ + "gene_synonym", + "JW0604" + ], + [ + "gene_synonym", + "NP_415145.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE74" + ], + [ + "gene_synonym", + "b0612" + ], + [ + "gene_synonym", + "citT" + ], + [ + "gene_synonym", + "ybdS" + ] + ], + "dna_sequence": "ATGTCTTTAGCAAAAGATAATATATGGAAACTATTGGCCCCACTGGTGGTGATGGGTGTCATGTTTCTTATCCCTGTCCCCGACGGTATGCCGCCGCAGGCATGGCATTACTTCGCTGTGTTTGTGGCAATGATTGTCGGCATGATCCTCGAGCCAATTCCGGCAACAGCGATCAGTTTTATTGCGGTTACTATTTGCGTTATTGGCAGTAATTACCTGCTCTTTGATGCCAAAGAATTAGCTGACCCAGCGTTTAATGCGCAAAAACAGGCGCTGAAATGGGGCCTGGCTGGTTTTTCCAGCACCACGGTATGGCTGGTATTTGGCGCATTTATTTTTGCATTAGGGTATGAAGTTTCCGGGTTAGGTCGTCGCATTGCCCTTTTCCTGGTGAAATTCATGGGCAAACGCACGCTGACGTTGGGTTATGCGATTGTCATTATCGACATTCTGCTGGCACCGTTTACACCTTCCAACACCGCGCGTACCGGGGGTACGGTTTTTCCGGTCATTAAAAACCTGCCGCCGTTGTTTAAATCATTCCCGAACGATCCGTCCGCGCGTCGTATTGGCGGCTATTTGATGTGGATGATGGTCATTAGTACCAGTCTGAGTTCGTCCATGTTTGTCACCGGTGCGGCACCAAACGTGCTGGGTCTGGAGTTCGTCAGCAAAATTGCCGGTATCCAGATTAGCTGGTTGCAGTGGTTCCTCTGCTTCCTGCCGGTTGGGGTTATCTTGCTTATCATTGCGCCGTGGCTTTCCTACGTGCTGTACAAACCGGAAATCACACACAGTGAAGAAGTGGCAACCTGGGCGGGTGATGAACTGAAAACCATGGGTGCGCTGACACGCAGAGAGTGGACACTGATTGGCCTTGTATTGCTCAGCTTAGGTTTGTGGGTATTTGGCAGTGAAGTCATTAATGCTACTGCGGTTGGTCTGCTGGCAGTTTCGCTAATGCTGGCCCTGCACGTTGTGCCTTGGAAAGACATTACCCGCTATAACAGCGCATGGAACACACTGGTCAACCTGGCAACTCTGGTTGTGATGGCTAACGGCCTGACTCGTTCTGGTTTTATTGACTGGTTCGCCGGTACCATGAGTACGCACCTGGAAGGATTCTCACCAAACGCAACGGTGATTGTACTGGTTCTGGTGTTCTACTTTGCACACTACCTGTTTGCCAGCCTGTCTGCGCACACCGCAACCATGCTGCCGGTTATTCTGGCCGTCGGTAAAGGTATTCCGGGCGTACCAATGGAACAACTGTGTATCCTGCTGGTGCTGTCTATCGGTATCATGGGCTGTCTGACGCCGTATGCAACCGGTCCTGGGGTGATTATTTACGGCTGTGGCTATGTGAAATCAAAAGATTACTGGCGTCTTGGCGCAATCTTCGGGGTGATTTACATCTCTATGTTGCTGTTGGTTGGCTGGCCGATTCTCGCCATGTGGAACTAA", + "dna_sequence_length": 1464, + "functions": [ + "citrate/succinate antiporter", + "citrate carrier" + ], + "id": "CDS_610", + "location": [ + [ + "NC_000913", + 646580, + "-", + 1464 + ] + ], + "md5": "d32408c42dcab6d51ed0eaf0c9149bcd", + "parent_gene": "", + "protein_md5": "c735e01d1db86756ade346e80d07e441", + "protein_translation": "MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN", + "protein_translation_length": 487, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002114" + ], + [ + "gene_synonym", + "ECK0606" + ], + [ + "gene_synonym", + "EcoGene:EG13539" + ], + [ + "gene_synonym", + "GI:16128596" + ], + [ + "gene_synonym", + "GeneID:946395" + ], + [ + "gene_synonym", + "JW0605" + ], + [ + "gene_synonym", + "NP_415146.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77231" + ], + [ + "gene_synonym", + "b0613" + ], + [ + "gene_synonym", + "citG" + ], + [ + "gene_synonym", + "ybdT" + ] + ], + "dna_sequence": "ATGTCGATGCCTGCAACGTCAACTAAAACCACAAAGCTTGCGACGTCATTAATCGATGAGTACGCCCTGCTGGGCTGGCGCGCCATGCTGACTGAAGTCAATCTGTCACCGAAACCAGGCCTCGTGGATCGCATTAACTGCGGTGCGCACAAAGATATGGCGCTGGAAGATTTCCACCGCAGCGCGCTGGCGATTCAGGGCTGGCTACCCCGTTTCATTGAATTTGGTGCCTGTAGTGCGGAAATGGCACCAGAAGCGGTACTCCACGGATTACGCCCAATTGGTATGGCTTGCGAAGGTGATATGTTCCGCGCCACTGCGGGCGTAAACACGCATAAAGGCAGCATTTTTTCTTTAGGGCTGCTATGTGCGGCAATTGGCCGTTTGCTTCAACTCAACCAACCGGTAACGCCAACAACCGTTTGTTCTACGGCGGCAAGTTTCTGCCGTGGCCTGACCGATCGCGAACTGCGTACCAATAATTCACAACTGACGGCAGGTCAACGGTTGTACCAACAGCTTGGCCTTACCGGCGCACGCGGTGAAGCCGAAGCGGGTTATCCACTGGTGATCAATCACGCCTTGCCGCATTACCTCACTCTGCTGGATCAGGGGTTAGATCCTGAACTGGCATTGCTCGATACCTTGCTCCTACTGATGGCGATCAACGGCGATACCAACGTTGCATCGCGCGGTGGCGAGGGGGGCCTGCGCTGGCTACAGCGCGAGGCGCAAACATTATTGCAAAAAGGGGGCATTCGAACCCCCGCCGATCTCGATTATCTCCGGCAGTTCGACAGGGAGTGTATCGAACGAAATCTCAGTCCAGGCGGCAGTGCTGACCTACTGATCCTTACCTGGTTTTTAGCACAGATTTAA", + "dna_sequence_length": 879, + "functions": [ + "2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase" + ], + "id": "CDS_611", + "location": [ + [ + "NC_000913", + 647509, + "-", + 879 + ] + ], + "md5": "b4b1057e26250b0331d35675749da33c", + "parent_gene": "", + "protein_md5": "a27ce1a7c7f7369ee4e47a9563e148fa", + "protein_translation": "MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002116" + ], + [ + "gene_synonym", + "ECK0607" + ], + [ + "gene_synonym", + "EcoGene:EG13540" + ], + [ + "gene_synonym", + "GI:16128597" + ], + [ + "gene_synonym", + "GeneID:949084" + ], + [ + "gene_synonym", + "JW0606" + ], + [ + "gene_synonym", + "NP_415147.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6G5" + ], + [ + "gene_synonym", + "b0614" + ], + [ + "gene_synonym", + "citX" + ], + [ + "gene_synonym", + "ybdU" + ] + ], + "dna_sequence": "ATGCACCTGCTTCCTGAACTCGCCAGCCACCATGCGGTATCAATTCCCGAGCTGCTCGTCAGCCGGGATGAAAGGCAAGCACGGCAACACGTCTGGCTCAAGCGCCATCCTGTTCCACTGGTCTCCTTTACCGTGGTTGCGCCTGGGCCGATTAAAGACAGCGAGGTCACACGCCGAATTTTTAATCATGGCGTGACAGCCTTGCGTGCCTTAGCCGCAAAACAGGGCTGGCAAATTCAGGAGCAGGCTGCACTGGTTTCCGCCAGCGGGCCGGAGGGCATGTTGAGCATTGCCGCCCCGGCTCGCGACCTCAAGCTCGCCACCATTGAGCTTGAACATAGTCATCCTCTCGGGCGGTTATGGGATATCGATGTCCTGACGCCCGAAGGCGAAATTCTCTCCCGCCGCGACTATTCACTGCCGCCTCGCCGCTGCCTGTTGTGCGAACAAAGCGCAGCCGTCTGCGCGCGTGGAAAAACCCATCAACTGACCGATTTACTCAACCGCATGGAGGCACTGCTGAACGATGTCGATGCCTGCAACGTCAACTAA", + "dna_sequence_length": 552, + "functions": [ + "apo-citrate lyase phosphoribosyl-dephospho-CoA transferase" + ], + "id": "CDS_612", + "location": [ + [ + "NC_000913", + 648035, + "-", + 552 + ] + ], + "md5": "e0704199963d3ef2c2b00ba9b6afbbe3", + "parent_gene": "", + "protein_md5": "55962c696a5d196a123b462b4b9fca6c", + "protein_translation": "MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDACNVN", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002119" + ], + [ + "gene_synonym", + "ECK0608" + ], + [ + "gene_synonym", + "EcoGene:EG13541" + ], + [ + "gene_synonym", + "GI:16128598" + ], + [ + "gene_synonym", + "GeneID:945230" + ], + [ + "gene_synonym", + "JW5087" + ], + [ + "gene_synonym", + "NP_415148.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75726" + ], + [ + "gene_synonym", + "b0615" + ], + [ + "gene_synonym", + "citF" + ], + [ + "gene_synonym", + "ybdV" + ] + ], + "dna_sequence": "ATGACGCAGAAAATTGAACAATCTCAACGACAAGAACGGGTAGCGGCCTGGAATCGTCGCGCTGAATGCGATCTTGCCGCTTTCCAGAACTCGCCAAAGCAAACCTACCAGGCTGAAAAAGCGCGCGATCGCAAACTGTGCGCCAACCTGGAAGAAGCGATTCGTCGCTCTGGTTTACAGGACGGCATGACGGTTTCCTTCCATCACGCTTTCCGTGGCGGTGACCTGACCGTCAATATGGTGATGGACGTCATCGCGAAGATGGGCTTTAAAAACCTGACCCTGGCGTCCAGCTCCCTGAGTGATTGCCATGCGCCGCTGGTAGAACACATTCGCCAGGGCGTGGTTACCCGCATTTATACCTCCGGCCTGCGTGGTCCACTGGCGGAAGAGATCTCCCGTGGTCTGCTGGCAGAACCGGTGCAGATCCACTCTCACGGCGGTCGTGTGCATCTGGTACAGAGCGGCGAACTGAATATCGACGTGGCTTTCCTCGGCGTCCCGTCCTGTGATGAATTCGGTAATGCCAACGGCTACACCGGTAAAGCCTGCTGCGGCTCCCTCGGCTATGCAATAGTTGATGCCGACAACGCAAAACAGGTCGTGATGCTTACCGAAGAACTGCTGCCTTATCCGCATAATCCGGCAAGCATTGAGCAAGATCAGGTTGATTTGATCGTCAAAGTTGACCGCGTTGGCGATGCTGCAAAAATCGGCGCTGGCGCGACCCGTATGACCACTAACCCGCGCGAACTGCTTATTGCCCGTAGCGCTGCGGATGTGATTGTCAACTCTGGCTACTTCAAAGAAGGTTTCTCCATGCAAACCGGCACCGGCGGCGCATCGCTGGCGGTAACCCGTTTCCTGGAAGACAAAATGCGTAGCCGCGATATTCGCGCCGACTTCGCCCTTGGCGGTATTACCGCGACGATGGTTGACCTGCACGAAAAAGGTCTGATCCGCAAACTGCTGGATGTGCAGAGCTTTGACAGCCATGCTGCGCAATCGCTGGCCCGTAACCCCAATCACATCGAAATCAGCGCCAACCAGTACGCTAACTGGGGTTCGAAAGGCGCATCGGTTGATCGTCTCGACGTGGTGGTACTGAGCGCGCTGGAAATTGACACCCAGTTCAACGTTAACGTGCTGACCGGCTCTGACGGCGTACTGCGTGGTGCTTCCGGTGGTCACTGCGATACCGCGATTGCCTCTGCGCTTTCCATCATCGTCGCGCCGCTGGTACGCGGTCGTATTCCGACTCTGGTGGATAACGTACTGACCTGCATCACCCCAGGCTCCAGTGTCGATATTCTGGTCACAGACCACGGTATCGCAGTTAACCCGGCACGTCCGGAACTGGCAGAACGTCTGCAGGAAGCGGGCATTAAAGTGGTTTCCATTGAGTGGCTGCGCGAACGTGCGCGTCTGCTGACCGGTGAACCACAGCCGATTGAATTCACAGACCGCGTCGTTGCCGTTGTGCGTTACCGCGATGGCTCGGTGATCGATGTTGTGCATCAGGTGAAGGAATAA", + "dna_sequence_length": 1533, + "functions": [ + "citrate lyase, citrate-ACP transferase (alpha) subunit" + ], + "id": "CDS_613", + "location": [ + [ + "NC_000913", + 649571, + "-", + 1533 + ] + ], + "md5": "81850b17300be9f71412fb3e4f90173b", + "parent_gene": "", + "protein_md5": "556eb168c8d8c6f0d8d0edf9b331c30b", + "protein_translation": "MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDRKLCANLEEAIRRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYTGKACCGSLGYAIVDADNAKQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQVKE", + "protein_translation_length": 510, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002122" + ], + [ + "gene_synonym", + "ECK0609" + ], + [ + "gene_synonym", + "EcoGene:EG13542" + ], + [ + "gene_synonym", + "GI:90111153" + ], + [ + "gene_synonym", + "GeneID:945406" + ], + [ + "gene_synonym", + "JW0608" + ], + [ + "gene_synonym", + "NP_415149.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I1" + ], + [ + "gene_synonym", + "b0616" + ], + [ + "gene_synonym", + "citE" + ], + [ + "gene_synonym", + "ybdW" + ] + ], + "dna_sequence": "ATGATTTCCGCTTCGCTGCAACAACGTAAAACTCGCACCCGCCGCAGCATGTTGTTTGTGCCTGGTGCCAATGCCGCGATGGTCAGCAACTCCTTCATCTACCCGGCTGATGCCCTGATGTTTGACCTCGAAGACTCCGTAGCATTGCGTGAAAAAGACACCGCCCGCCGCATGGTTTACCACGCGCTGCAACATCCGCTGTATCGCGATATTGAAACCATTGTGCGTGTCAACGCGCTGGATTCCGAATGGGGTGTTAACGACCTGGAAGCCGTCGTTCGCGGTGGTGCGGACGTTGTGCGTCTGCCGAAAACCGATACCGCTCAGGATGTTCTGGATATTGAAAAAGAGATCCTGCGTATCGAAAAAGCCTGTGGTCGTGAACCCGGCAGCACCGGCCTGCTGGCGGCGATTGAATCTCCGCTGGGGATTACCCGCGCAGTGGAAATCGCTCACGCTTCCGAGCGTTTGATCGGTATCGCCCTCGGTGCAGAAGACTATGTGCGCAACCTGCGTACAGAACGCTCCCCGGAAGGAACTGAACTGCTGTTCGCACGCTGTTCCATTTTGCAGGCCGCGCGCTCTGCGGGTATTCAGGCGTTCGATACCGTCTATTCCGACGCTAACAACGAAGCCGGATTTCTGCAAGAAGCCGCCCACATCAAACAGCTGGGCTTTGACGGCAAATCGCTGATCAACCCGCGTCAGATTGATCTGCTGCACAACCTCTACGCACCGACCCAGAAAGAAGTGGATCACGCCCGCCGCGTCGTAGAAGCCGCTGAAGCCGCCGCTCGCGAAGGCCTCGGCGTGGTTTCCCTGAACGGCAAGATGGTGGACGGTCCGGTTATCGATCGCGCCCGTCTGGTGCTCTCCCGTGCAGAACTTTCCGGCATCCGCGAAGAATAA", + "dna_sequence_length": 909, + "functions": [ + "citrate lyase, citryl-ACP lyase (beta) subunit" + ], + "id": "CDS_614", + "location": [ + [ + "NC_000913", + 650490, + "-", + 909 + ] + ], + "md5": "72d9a93504540b5f0ff194729784f089", + "parent_gene": "", + "protein_md5": "2bf4dbadb6f030f580754e5d6a4776b1", + "protein_translation": "MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002124" + ], + [ + "gene_synonym", + "ECK0610" + ], + [ + "gene_synonym", + "EcoGene:EG13543" + ], + [ + "gene_synonym", + "GI:16128600" + ], + [ + "gene_synonym", + "GeneID:945415" + ], + [ + "gene_synonym", + "JW0609" + ], + [ + "gene_synonym", + "NP_415150.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69330" + ], + [ + "gene_synonym", + "b0617" + ], + [ + "gene_synonym", + "citD" + ], + [ + "gene_synonym", + "ybdX" + ] + ], + "dna_sequence": "ATGAAAATAAACCAGCCCGCCGTTGCAGGCACCCTTGAGTCTGGGGATGTGATGATACGCATCGCCCCACTCGATACGCAGGATATCGACCTGCAAATCAATAGCAGCGTTGAGAAACAGTTTGGCGATGCAATTCGCACCACCATTCTGGACGTTCTCGCCCGCTACAACGTGCGCGGCGTACAGCTGAATGTCGATGACAAAGGCGCACTGGACTGCATTTTACGTGCACGACTGGAAGCCCTGCTGGCACGCGCCAGCGGTATCCCGGCTCTGCCATGGGAGGATTGCCAATGA", + "dna_sequence_length": 297, + "functions": [ + "citrate lyase, acyl carrier (gamma) subunit" + ], + "id": "CDS_615", + "location": [ + [ + "NC_000913", + 650783, + "-", + 297 + ] + ], + "md5": "22d1b5e7d06412f8b53e2e6251b0d118", + "parent_gene": "", + "protein_md5": "e0f1cc85c9d62b640c6184fbf68bd83e", + "protein_translation": "MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDAIRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002126" + ], + [ + "gene_synonym", + "ECK0611" + ], + [ + "gene_synonym", + "EcoGene:EG13645" + ], + [ + "gene_synonym", + "GI:90111154" + ], + [ + "gene_synonym", + "GeneID:945231" + ], + [ + "gene_synonym", + "JW0610" + ], + [ + "gene_synonym", + "NP_415151.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77390" + ], + [ + "gene_synonym", + "b0618" + ], + [ + "gene_synonym", + "citC" + ], + [ + "gene_synonym", + "ybeO" + ] + ], + "dna_sequence": "ATGTTCGGCAATGATATTTTCACCCGCGTAAAACGTTCAGAAAATAAAAAAATGGCGGAAATCGCCCAATTCCTGCATGAAAATGATTTGAGCGTTGACACCACAGTCGAAGTATTTATTACCGTAACCCGCGATGAAAAGCTTATCGCGTGCGGTGGAATTGCCGGAAATATTATTAAATGCGTTGCTATCAGTGAATCCGTCCGCGGTGAAGGACTGGCGCTGACATTAGCCACTGAATTGATAAACCTCGCCTATGAGCGGCACAGCACGCATCTGTTTATTTATACCAAAACCGAATACGAGGCGCTGTTCCGCCAGTGCGGTTTTTCCACGCTGACCAGCGTACCCGGCGTGATGGTGCTGATGGAAAACAGCGCCACGCGACTGAAACGCTATGCCGAATCGCTGAAAAAATTTCGTCATCCAGGGAACAAGATTGGCTGCATTGTGATGAACGCCAATCCCTTTACGAATGGTCACCGTTATCTGATTCAACAGGCTGCGGCACAGTGCGACTGGTTGCATCTGTTTTTAGTCAAAGAAGATTCTTCACGCTTCCCCTATGAAGACCGGCTGGATTTGGTGTTAAAAGGCACCGCCGATATTCCACGCCTGACTGTGCATCGTGGCTCCGAATACATCATCTCCCGCGCTACGTTCCCTTGCTACTTCATTAAAGAACAGAGCGTCATTAACCATTGTTACACCGAAATTGATCTGAAGATTTTCCGTCAGTACCTCGCTCCCGCGCTGGGTGTAACTCACCGCTTTGTCGGTACTGAACCCTTTTGTCGCGTTACCGCCCAGTACAACCAGGATATGCGCTACTGGCTGGAAACGCCGACTATCTCCGCACCGCCCATCGAACTGGTTGAAATTGAGCGGCTGCGTTACCAGGAGATGCCGATATCCGCTTCCCGGGTACGTCAACTGCTGGCGAAAAACGATCTCACGGCTATCGCGCCGCTGGTCCCTGCAGTCACGCTGCATTATTTGCAGAACCTGCTTGAGCACTCCCGCCAGGACGCGGCAGCTCGTCAAAAGACCCCCGCATGA", + "dna_sequence_length": 1059, + "functions": [ + "citrate lyase ligase", + "[citrate [pro-3S]-lyase] ligase" + ], + "id": "CDS_616", + "location": [ + [ + "NC_000913", + 651856, + "-", + 1059 + ] + ], + "md5": "1f0a11857575999bf58c372d0db9e510", + "parent_gene": "", + "protein_md5": "9ae99b578fc0484dd23857f4ca6d1ee4", + "protein_translation": "MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002129" + ], + [ + "gene_synonym", + "ECK0612" + ], + [ + "gene_synonym", + "EcoGene:EG13646" + ], + [ + "gene_synonym", + "GI:16128602" + ], + [ + "gene_synonym", + "GeneID:945233" + ], + [ + "gene_synonym", + "JW0611" + ], + [ + "gene_synonym", + "NP_415152.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77510" + ], + [ + "gene_synonym", + "b0619" + ], + [ + "gene_synonym", + "citA" + ], + [ + "gene_synonym", + "criS" + ], + [ + "gene_synonym", + "dpiB" + ], + [ + "gene_synonym", + "mpdB" + ], + [ + "gene_synonym", + "ybeP" + ] + ], + "dna_sequence": "ATGTTGCAGCTTAACGAGAATAAACAGTTTGCATTTTTCCAAAGACTGGCATTTCCGCTGCGTATCTTTTTGCTGATTCTGGTGTTCTCAATATTTGTCATTGCAGCCCTGGCGCAATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAGTTTTTATTACCGATGGCAGGTGTGTTTGTCGTGCTGTTAGGGATTCTGATGTTGCTGTCGTGGTTCCTGGCCGCGCATATCCGTCGGCAGATGATGGGCATGGAGCCAAAGCAAATCGCACGCGTGGTCCGTCAGCAAGAGGCGCTGTTTAGTTCGGTTTATGAAGGGCTGATTGCGGTGGATCCGCATGGTTACATTACCGCCATCAATCGTAACGCAAGAAAGATGCTGGGGCTGAGTTCCCCCGGACGGCAATGGTTGGGTAAACCCATTGTTGAAGTGGTCAGGCCCGCCGATTTCTTTACCGAACAGATTGATGAAAAACGTCAGGATGTGGTGGCGAACTTTAACGGTCTGAGCGTTATTGCCAACCGGGAAGCTATTCGTTCAGGTGATGATTTGCTGGGGGCCATTATCAGCTTTCGTAGTAAAGACGAAATTTCCACCCTCAATGCGCAACTGACGCAAATAAAACAATACGTTGAGAGCCTTCGTACATTGCGACACGAGCATCTCAATTGGATGTCGACGCTCAATGGTCTGTTGCAGATGAAAGAGTATGATCGCGTGCTGGCGATGGTGCAGGGGGAGTCTCAGGCCCAGCAACAGCTTATTGACAGCCTGCGCGAGGCGTTTGCCGATCGCCAGGTGGCGGGGCTGCTTTTTGGTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTATTCCTCAGCGATGAAGGCGATGATGTGGTGATTGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAGGGGGTCAGTACGCGTGCTGACGAGCCCGGTGAACATGGCATTGGGTTGTACTTGATTGCCAGCTACGTAACGCGCTGCGGTGGTGTTATCACTCTCGAAGATAATGATCCCTGCGGTACCTTATTTTCAATCTATATTCCGAAAGTGAAACCTAATGACAGCTCCATTAACCCTATTGATCGTTGA", + "dna_sequence_length": 1659, + "functions": [ + "sensory histidine kinase in two-component regulatory system with CitB" + ], + "id": "CDS_617", + "location": [ + [ + "NC_000913", + 652235, + "+", + 1659 + ] + ], + "md5": "5b6e4e93318cee185de74606a44a36de", + "parent_gene": "", + "protein_md5": "6325fbb2209ed36a4a7517410ade6cb1", + "protein_translation": "MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPMQFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIVEVVRPADFFTEQIDEKRQDVVANFNGLSVIANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPIDR", + "protein_translation_length": 552, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002131" + ], + [ + "gene_synonym", + "ECK0613" + ], + [ + "gene_synonym", + "EcoGene:EG13544" + ], + [ + "gene_synonym", + "GI:16128603" + ], + [ + "gene_synonym", + "GeneID:947008" + ], + [ + "gene_synonym", + "JW0612" + ], + [ + "gene_synonym", + "NP_415153.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEF4" + ], + [ + "gene_synonym", + "b0620" + ], + [ + "gene_synonym", + "citB" + ], + [ + "gene_synonym", + "criR" + ], + [ + "gene_synonym", + "dpiA" + ], + [ + "gene_synonym", + "mpdA" + ] + ], + "dna_sequence": "ATGACAGCTCCATTAACCCTATTGATCGTTGAGGACGAAACGCCGCTGGCAGAGATGCATGCGGAATATATTCGTCACATTCCCGGATTCAGTCAGATATTACTGGCGGGAAATCTGGCGCAGGCCCGAATGATGATCGAGCGTTTTAAGCCGGGGCTAATCTTGCTCGATAACTATCTTCCTGACGGTAGAGGGATTAATTTACTGCATGAACTGGTGCAGGCGCATTATCCCGGCGACGTGGTGTTTACCACTGCAGCCAGCGATATGGAAACGGTGTCTGAAGCCGTACGTTGTGGTGTATTTGATTATCTCATTAAGCCCATTGCCTATGAACGGCTGGGGCAAACGCTAACCCGTTTCCGCCAGCGTAAACATATGCTGGAAAGTATTGATAGCGCCAGCCAGAAGCAAATTGATGAGATGTTTAATGCTTATGCTCGCGGTGAACCTAAGGACGAGCTACCGACCGGCATTGACCCCTTGACGCTAAACGCGGTGCGAAAACTGTTTAAAGAGCCTGGTGTGCAACATACGGCAGAAACGGTGGCGCAGGCACTGACCATCAGCCGCACCACTGCCAGGCGTTATCTTGAATATTGCGCCAGCCGCCATCTGATTATTGCTGAAATTGTTCACGGCAAAGTTGGCAGACCACAACGCATATACCACAGTGGGTGA", + "dna_sequence_length": 681, + "functions": [ + "response regulator in two-component regulatory system with CitA" + ], + "id": "CDS_618", + "location": [ + [ + "NC_000913", + 653862, + "+", + 681 + ] + ], + "md5": "ccae9ef7de30898cf3dacd456416dec8", + "parent_gene": "", + "protein_md5": "20f397a95735142ebb05825c6c566ddc", + "protein_translation": "MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQRIYHSG", + "protein_translation_length": 226, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002133" + ], + [ + "gene_synonym", + "ECK0614" + ], + [ + "gene_synonym", + "EcoGene:EG13545" + ], + [ + "gene_synonym", + "GI:16128604" + ], + [ + "gene_synonym", + "GeneID:945000" + ], + [ + "gene_synonym", + "JW0613" + ], + [ + "gene_synonym", + "JW0616" + ], + [ + "gene_synonym", + "NP_415154.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABP3" + ], + [ + "gene_synonym", + "b0621" + ], + [ + "gene_synonym", + "dcuC" + ] + ], + "dna_sequence": "ATGCTGACATTCATTGAGCTCCTTATTGGGGTTGTGGTTATTGTGGGTGTAGCTCGCTACATCATTAAAGGGTATTCCGCCACTGGTGTGTTATTTGTCGGTGGCCTGTTATTGCTGATTATCAGTGCCATTATGGGGCACAAAGTGTTACCGTCCAGCCAGGCTTCAACAGGCTACAGCGCCACGGATATCGTTGAATACGTTAAAATATTACTAATGAGCCGCGGCGGCGACCTCGGCATGATGATTATGATGCTGTGTGGATTTGCCGCTTACATGACCCATATCGGCGCGAATGATATGGTGGTCAAGCTGGCGTCAAAACCATTGCAGTATATTAACTCCCCTTACCTGCTGATGATTGCCGCCTATTTTGTCGCCTGTCTGATGTCTCTGGCCGTCTCTTCCGCAACCGGTCTGGGTGTTTTGCTGATGGCAACCCTATTTCCGGTGATGGTAAACGTTGGTATCAGTCGTGGCGCAGCTGCTGCCATTTGTGCCTCCCCGGCGGCGATTATTCTCGCACCGACTTCAGGGGATGTGGTGCTGGCGGCGCAAGCTTCCGAAATGTCGCTGATTGACTTCGCCTTCAAAACGACGCTGCCTATCTCAATTGCTGCAATTATCGGCATGGCGATCGCCCACTTCTTCTGGCAACGTTATCTGGATAAAAAAGAGCACATCTCTCATGAAATGTTAGATGTCAGTGAAATCACCACCACTGCTCCTGCGTTTTATGCCATTTTGCCGTTCACGCCGATCATCGGTGTACTGATTTTTGACGGTAAATGGGGTCCGCAATTACACATCATCACTATTCTGGTGATTTGTATGCTGATTGCCTCCATTCTGGAGTTCCTCCGCAGCTTTAATACCCAGAAAGTTTTCTCTGGTCTGGAAGTGGCTTATCGCGGGATGGCAGATGCGTTTGCTAACGTGGTGATGCTGCTGGTTGCCGCTGGGGTATTCGCTCAGGGGCTTAGCACCATCGGCTTTATTCAAAGTCTGATTTCTATCGCTACCTCGTTTGGTTCGGCGAGTATCATCCTGATGCTGGTATTGGTGATTCTGACAATGCTGGCGGCAGTCACGACCGGTTCAGGCAATGCGCCGTTTTATGCGTTTGTTGAGATGATCCCGAAACTGGCGCACTCTTCCGGCATTAACCCGGCGTATTTGACTATCCCGATGCTGCAGGCGTCAAACCTTGGCCGTACCCTTTCGCCCGTTTCTGGCGTAGTCGTTGCGGTTGCCGGGATGGCGAAGATCTCGCCGTTTGAAGTCGTAAAACGCACCTCGGTACCGGTGCTTGTTGGTTTGGTGATTGTTATCGTTGCTACAGAGCTGATGGTGCCAGGAACGGCAGCAGCGGTCACAGGCAAGTAA", + "dna_sequence_length": 1386, + "functions": [ + "anaerobic C4-dicarboxylate transport" + ], + "id": "CDS_619", + "location": [ + [ + "NC_000913", + 655968, + "-", + 1386 + ] + ], + "md5": "e6995991fa29c88745f77e16ef15d79c", + "parent_gene": "", + "protein_md5": "3bd78981a8f21d299d1a3261906141b4", + "protein_translation": "MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002139" + ], + [ + "gene_synonym", + "ECK0615" + ], + [ + "gene_synonym", + "EcoGene:EG12180" + ], + [ + "gene_synonym", + "GI:16128605" + ], + [ + "gene_synonym", + "GeneID:946360" + ], + [ + "gene_synonym", + "JW0617" + ], + [ + "gene_synonym", + "NP_415155.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37001" + ], + [ + "gene_synonym", + "b0622" + ], + [ + "gene_synonym", + "crcA" + ], + [ + "gene_synonym", + "pagP" + ], + [ + "gene_synonym", + "ybeG" + ] + ], + "dna_sequence": "ATGAACGTGAGTAAATATGTCGCTATCTTTTCCTTTGTTTTTATTCAGTTAATCAGCGTTGGTAAAGTTTTTGCTAACGCAGATGAGTGGATGACAACGTTTAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCTGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGCCTGTCGCGTTGGGATGAAAAAGGAAACTGGCATGGCCTGTATGCCATGGCATTTAAGGACTCGTGGAACAAATGGGAACCGATTGCCGGATACGGATGGGAAAGTACCTGGCGACCGCTGGCGGATGAAAATTTTCATTTAGGTCTGGGATTCACCGCTGGCGTAACGGCACGCGATAACTGGAATTACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGA", + "dna_sequence_length": 561, + "functions": [ + "phospholipid:lipid A palmitoyltransferase" + ], + "id": "CDS_620", + "location": [ + [ + "NC_000913", + 656557, + "+", + 561 + ] + ], + "md5": "1067fbd71e433eab389bbdcf47352437", + "parent_gene": "", + "protein_md5": "b65498f9705bea4bcec8be014cad784c", + "protein_translation": "MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF", + "protein_translation_length": 186, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002142" + ], + [ + "gene_synonym", + "ECK0616" + ], + [ + "gene_synonym", + "EcoGene:EG12179" + ], + [ + "gene_synonym", + "GI:16128606" + ], + [ + "gene_synonym", + "GeneID:947024" + ], + [ + "gene_synonym", + "JW0618" + ], + [ + "gene_synonym", + "NP_415156.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A972" + ], + [ + "gene_synonym", + "b0623" + ], + [ + "gene_synonym", + "cspE" + ], + [ + "gene_synonym", + "gicA" + ], + [ + "gene_synonym", + "msmC" + ] + ], + "dna_sequence": "ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA", + "dna_sequence_length": 210, + "functions": [ + "constitutive cold shock family transcription antitermination protein", + "negative regulator of cspA transcription", + "RNA melting protein", + "ssDNA-binding protein" + ], + "id": "CDS_621", + "location": [ + [ + "NC_000913", + 657292, + "+", + 210 + ] + ], + "md5": "475f57e37991a2f8ce15eb5942e2c17f", + "parent_gene": "", + "protein_md5": "a681313ba1313404e2556ff70a8ea5db", + "protein_translation": "MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002144" + ], + [ + "gene_synonym", + "ECK0617" + ], + [ + "gene_synonym", + "EcoGene:EG12209" + ], + [ + "gene_synonym", + "GI:16128607" + ], + [ + "gene_synonym", + "GeneID:945798" + ], + [ + "gene_synonym", + "JW0619" + ], + [ + "gene_synonym", + "NP_415157.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37002" + ], + [ + "gene_synonym", + "b0624" + ], + [ + "gene_synonym", + "crcB" + ], + [ + "gene_synonym", + "flc" + ], + [ + "gene_synonym", + "fluC" + ], + [ + "gene_synonym", + "ybeI" + ] + ], + "dna_sequence": "GTGTTACAACTTCTTTTAGCAGTTTTTATTGGCGGTGGTACGGGAAGCGTGGCGAGATGGCTGTTAAGTATGCGATTTAACCCACTGCATCAGGCGATTCCGTTGGGGACGCTGACAGCAAACCTGATTGGGGCATTCATCATAGGAATAGGATTCGCATGGTTCAGCAGGATGACGAACATTGATCCAGTGTGGAAAGTATTAATCACCACCGGATTTTGTGGCGGTCTAACAACCTTCTCAACATTTTCGGCAGAAGTGGTGTTTTTGTTACAAGAGGGCCGCTTTGGCTGGGCATTACTGAACGTTTTCGTCAACCTTCTGGGGTCTTTTGCCATGACCGCACTGGCATTCTGGCTGTTTTCGGCCTCAACCGCACACTAA", + "dna_sequence_length": 384, + "functions": [ + "fluoride efflux channel, dual topology membrane protein" + ], + "id": "CDS_622", + "location": [ + [ + "NC_000913", + 657938, + "-", + 384 + ] + ], + "md5": "72e153a0f9f52023b5b8ec077bbda8eb", + "parent_gene": "", + "protein_md5": "dcc113d0b7b928165e906748a9b87690", + "protein_translation": "MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIGAFIIGIGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTAH", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002148" + ], + [ + "gene_synonym", + "ASAP:ABE-0002150" + ], + [ + "gene_synonym", + "ASAP:ABE-0285113" + ], + [ + "gene_synonym", + "ECK0618" + ], + [ + "gene_synonym", + "EcoGene:EG13162" + ], + [ + "gene_synonym", + "GeneID:4056041" + ], + [ + "gene_synonym", + "JW0620" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39874" + ], + [ + "gene_synonym", + "b4581" + ], + [ + "gene_synonym", + "ybeH" + ], + [ + "gene_synonym", + "ybeM" + ] + ], + "dna_sequence": "ATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATCTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTCAGGCAGGAAACATCGTCGCCCGTTATGCCAAACTGCATCTCTATGATGCATTTGCCATTCAGGAATCACGCCGTGTTGATGCTGGTAATGAAATCGCTCCGTTACTGGAGGTGGAAGGGATGAAGGTCGGTCTGATGACCTGTTATGACTTACGCTTTCCAGAGCTGGCGCTGGCACAGGCATTACAGGGAGCTGAAATCCTGGTACTTCCTGCCGCCTGGGTTCGCGGGCCGCTCAAAGAGCATCACTGGTCAACGTTGCTTGCCGCTCGTGCGCTGGATACCACCTGTTATATGGTGGCGGCGGGGGAGTGCGGGAACAAAAATATCGGTCAAAGCCGGATTATAGATCCCTTTGGCGTCACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTAAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGA", + "dna_sequence_length": 789, + "id": "CDS_623", + "location": [ + [ + "NC_000913", + 658031, + "+", + 195 + ], + [ + "NC_000913", + 658225, + "+", + 594 + ] + ], + "md5": "27b2a1acbaeb43e42b5b98f6fc5ea4ab", + "parent_gene": "", + "protein_md5": "dec3dbc95dbc877c4051326aaf39b599", + "protein_translation": "MLVAAGQFAVTSVWEKNAEICASLMAQAAENDASLFALPEALLARDDHDADLSVKSAQLLEGEFLRTLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAGNIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQALQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002153" + ], + [ + "gene_synonym", + "ECK0620" + ], + [ + "gene_synonym", + "EcoGene:EG11305" + ], + [ + "gene_synonym", + "GI:16128610" + ], + [ + "gene_synonym", + "GeneID:945228" + ], + [ + "gene_synonym", + "JW0622" + ], + [ + "gene_synonym", + "NP_415160.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A843" + ], + [ + "gene_synonym", + "b0627" + ], + [ + "gene_synonym", + "tatE" + ], + [ + "gene_synonym", + "ybeC" + ] + ], + "dna_sequence": "ATGGGTGAGATTAGTATTACCAAACTGCTGGTAGTTGCGGCGCTGGTCGTTCTGCTGTTTGGGACTAAGAAGTTACGTACGCTGGGCGGAGACCTTGGAGCGGCCATTAAAGGGTTCAAGAAGGCGATGAATGATGACGATGCTGCGGCGAAAAAAGGCGCAGACGTTGATCTTCAGGCTGAAAAGCTCTCTCATAAAGAGTGA", + "dna_sequence_length": 204, + "functions": [ + "TatABCE protein translocation system subunit" + ], + "id": "CDS_624", + "location": [ + [ + "NC_000913", + 658947, + "+", + 204 + ] + ], + "md5": "5981f3d0ba3a5e3a258ae189633609aa", + "parent_gene": "", + "protein_md5": "2580a29ab0383932419deb2a2bdb7ef8", + "protein_translation": "MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKGADVDLQAEKLSHKE", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002155" + ], + [ + "gene_synonym", + "ECK0621" + ], + [ + "gene_synonym", + "EcoGene:EG11306" + ], + [ + "gene_synonym", + "GI:16128611" + ], + [ + "gene_synonym", + "GeneID:945227" + ], + [ + "gene_synonym", + "JW0623" + ], + [ + "gene_synonym", + "NP_415161.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60716" + ], + [ + "gene_synonym", + "b0628" + ], + [ + "gene_synonym", + "lip" + ], + [ + "gene_synonym", + "lipA" + ] + ], + "dna_sequence": "ATGAGTAAACCCATTGTGATGGAACGCGGTGTTAAATACCGCGATGCCGATAAGATGGCCCTTATCCCGGTTAAAAACGTGGCAACAGAGCGCGAAGCCCTGCTGCGCAAGCCGGAATGGATGAAAATCAAGCTTCCAGCGGACTCTACACGTATCCAGGGCATCAAAGCCGCAATGCGCAAAAATGGCCTGCATTCTGTCTGCGAGGAAGCCTCCTGCCCTAACCTGGCGGAATGCTTCAACCACGGCACAGCAACGTTTATGATCCTCGGCGCTATTTGTACCCGCCGTTGTCCGTTCTGTGATGTTGCCCACGGTCGCCCGGTAGCTCCTGATGCCAATGAACCAGTGAAACTGGCGCAGACCATTGCCGATATGGCGCTGCGTTATGTGGTTATCACCTCCGTTGACCGTGATGACCTGCGCGATGGCGGTGCCCAGCACTTTGCGGATTGCATTACTGCCATTCGGGAAAAAAGCCCGCAAATCAAAATTGAAACTCTGGTGCCGGATTTCCGCGGTCGTATGGATCGTGCTCTGGATATTCTGACTGCAACGCCACCAGATGTGTTCAACCATAACCTGGAAAACGTACCGCGTATTTACCGTCAGGTACGGCCTGGTGCAGATTACAACTGGTCGCTGAAGCTGCTGGAACGCTTTAAAGAAGCGCATCCGGAAATCCCGACCAAGTCTGGTCTGATGGTGGGACTGGGTGAAACCAATGAAGAAATTATTGAGGTAATGCGCGACCTGCGCCGTCATGGTGTGACGATGTTAACGCTGGGGCAATATTTGCAGCCAAGCCGCCATCACCTGCCGGTTCAACGTTACGTTAGCCCGGATGAGTTCGACGAAATGAAAGCCGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAA", + "dna_sequence_length": 966, + "functions": [ + "lipoate synthase" + ], + "id": "CDS_625", + "location": [ + [ + "NC_000913", + 660216, + "-", + 966 + ] + ], + "md5": "7a812526b5b42864974aa0fd09c6a479", + "parent_gene": "", + "protein_md5": "723afa78dd8cb0f4392bbdc68d14adc4", + "protein_translation": "MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002158" + ], + [ + "gene_synonym", + "ECK0622" + ], + [ + "gene_synonym", + "EcoGene:EG11594" + ], + [ + "gene_synonym", + "GI:90111155" + ], + [ + "gene_synonym", + "GeneID:945219" + ], + [ + "gene_synonym", + "JW0624" + ], + [ + "gene_synonym", + "NP_415162.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30979" + ], + [ + "gene_synonym", + "b0629" + ], + [ + "gene_synonym", + "ybeF" + ] + ], + "dna_sequence": "GTGGATAGTAATAATCAAATTGAACCCTGTTTAAGCAGAAAGTCGTCAGAAGGTAAACCACAAATATTTACAACCTTACGAAATATTGATCTTAACCTTCTGACTATTTTTGAAGCTGTATATGTACATAAAGGGATCGTTAATGCAGCGAAAGTGCTTAATCTGACCCCCTCGGCAATCAGTCAGTCTATTCAGAAACTGCGCGTTATATTCCCTGACCCATTGTTTATTCGCAAAGGCCAGGGTGTCACTCCTACCGCATTTGCGATGCATCTACATGAGTATATCAGTCAGGGCCTTGAGTCCATTCTTGGCGCGCTGGATATCGAAGGAAGCTATGATAAGCAACGAACGATAACTATTGCGACCACTCCCTCGGTCGGAGCACTGGTCCTTCCTGTCATCTATCGGGCGATTAAAACTCACTATCCGCAGCTTTTACTGCGCAACCCGCCCATCAGCGACGCGGAAAACCAACTCAGTCAGTTTCAAACCGATCTCATCATCGATAACATGTTTTGCACCAATCGTACGGTGCAACATCATGTTCTGTTCACCGACAATATGGTGTTAATTTGCCGCGAGGGAAATCCACTACTCTCTTTAGAAGATGACAGAGAGACTATCGACAACGCTGCGCATGTACTTCTGTTACCGGAAGAGCAAAATTTCAGCGGTCTGCGGCAGAGAGTTCAAGAAATGTTTCCGGACCGGCAAATCAATTTCACCAGCTACAACATTTTGACAATCGCTGCACTGGTTGCCAACAGTGACATGTTAGCGATTATTCCCAGCCGTTTTTATAACCTGTTTAGCCGCTGCTGGCCGCTGGAAAAACTGCCTTTTCCGTCCTTAAATGAGGAGCAAATAGATTTCTCTATCCACTACAACAAATTCAGCCTGCGTGATCCCATCCTGCACGGAGTAATAGATGTTATCCGTAATGCATTTTGA", + "dna_sequence_length": 954, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_626", + "location": [ + [ + "NC_000913", + 661378, + "-", + 954 + ] + ], + "md5": "ac8cbe33c17b2e19c7c169c99cccede5", + "parent_gene": "", + "protein_md5": "dfc3a58f52b18a50b0520aa3a72b51c5", + "protein_translation": "MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002160" + ], + [ + "gene_synonym", + "ECK0623" + ], + [ + "gene_synonym", + "EcoGene:EG11591" + ], + [ + "gene_synonym", + "GI:90111156" + ], + [ + "gene_synonym", + "GeneID:945217" + ], + [ + "gene_synonym", + "JW5089" + ], + [ + "gene_synonym", + "NP_415163.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60720" + ], + [ + "gene_synonym", + "b0630" + ], + [ + "gene_synonym", + "cde" + ], + [ + "gene_synonym", + "lipB" + ] + ], + "dna_sequence": "TTGTATCAGGATAAAATTCTTGTCCGCCAGCTCGGTCTTCAGCCTTACGAGCCAATCTCCCAGGCTATGCATGAATTCACCGATACCCGCGATGATAGTACCCTTGATGAAATCTGGCTGGTCGAGCACTATCCGGTATTCACCCAAGGTCAGGCAGGAAAAGCGGAGCACATTTTAATGCCGGGTGATATTCCGGTGATCCAGAGCGATCGCGGTGGGCAGGTGACTTATCACGGGCCGGGGCAACAGGTGATGTATGTGTTGCTTAACCTGAAACGCCGTAAACTCGGTGTGCGTGAACTGGTGACCTTGCTTGAGCAAACAGTGGTGAATACCCTGGCTGAACTGGGTATAGAAGCGCATCCTCGGGCTGACGCGCCAGGTGTCTATGTTGGGGAAAAGAAAATTTGCTCACTGGGTTTACGTATTCGACGCGGTTGTTCATTCCACGGTCTGGCATTAAACGTCAATATGGATCTTTCACCATTTTTACGTATTAATCCTTGTGGGTATGCCGGAATGGAAATGGCTAAAATATCACAATGGAAACCCGAAGCGACGACTAATAATATTGCTCCACGTTTACTGGAAAATATTTTAGCGCTACTAAACAATCCGGACTTCGAATATATTACCGCTTAA", + "dna_sequence_length": 642, + "functions": [ + "octanoyltransferase", + "octanoyl-[ACP]:protein N-octanoyltransferase" + ], + "id": "CDS_627", + "location": [ + [ + "NC_000913", + 662278, + "-", + 642 + ] + ], + "md5": "b54c32439e978477f57485ad707b4e52", + "parent_gene": "", + "protein_md5": "4dd45fca1c6048bac30895d94a916a39", + "protein_translation": "MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002162" + ], + [ + "gene_synonym", + "ECK0624" + ], + [ + "gene_synonym", + "EcoGene:EG11592" + ], + [ + "gene_synonym", + "GI:16128614" + ], + [ + "gene_synonym", + "GeneID:945220" + ], + [ + "gene_synonym", + "JW0626" + ], + [ + "gene_synonym", + "NP_415164.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8J4" + ], + [ + "gene_synonym", + "b0631" + ], + [ + "gene_synonym", + "ybeD" + ] + ], + "dna_sequence": "ATGAAAACCAAACTTAACGAACTGCTTGAATTCCCTACTCCTTTTACTTACAAAGTTATGGGGCAGGCGTTACCTGAGCTGGTTGATCAGGTGGTTGAAGTGGTACAGCGCCATGCGCCAGGTGACTACACCCCAACGGTAAAACCAAGCAGCAAAGGCAACTACCACTCGGTATCTATCACTATCAACGCCACTCATATCGAGCAGGTTGAAACACTGTATGAAGAACTGGGCAAAATCGATATTGTCCGCATGGTTCTGTAA", + "dna_sequence_length": 264, + "functions": [ + "UPF0250 family protein" + ], + "id": "CDS_628", + "location": [ + [ + "NC_000913", + 662642, + "-", + 264 + ] + ], + "md5": "b76c381d54c60f82f1c1959ba4684cfa", + "parent_gene": "", + "protein_md5": "95df53110b4b0bff22f15b71a45ee620", + "protein_translation": "MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002168" + ], + [ + "gene_synonym", + "ECK0625" + ], + [ + "gene_synonym", + "EcoGene:EG10201" + ], + [ + "gene_synonym", + "GI:16128615" + ], + [ + "gene_synonym", + "GeneID:945222" + ], + [ + "gene_synonym", + "JW0627" + ], + [ + "gene_synonym", + "NP_415165.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEB2" + ], + [ + "gene_synonym", + "b0632" + ], + [ + "gene_synonym", + "dacA" + ], + [ + "gene_synonym", + "pfv" + ] + ], + "dna_sequence": "ATGAATACCATTTTTTCCGCTCGTATCATGAAGCGCCTGGCGCTCACCACGGCTCTTTGCACAGCCTTTATCTCTGCTGCACATGCCGATGACCTGAATATCAAAACTATGATCCCGGGTGTACCGCAGATCGATGCGGAGTCCTACATCCTGATTGACTATAACTCCGGCAAAGTGCTCGCCGAACAGAACGCAGATGTCCGCCGCGATCCTGCCAGCCTGACCAAAATGATGACCAGTTACGTTATCGGCCAGGCAATGAAAGCCGGTAAATTTAAAGAAACTGATTTAGTCACTATCGGCAACGACGCATGGGCCACCGGTAACCCGGTGTTTAAAGGTTCTTCGCTGATGTTCCTCAAACCGGGCATGCAGGTTCCGGTTTCTCAGCTGATCCGCGGTATTAACCTGCAATCGGGTAACGATGCTTGTGTCGCCATGGCCGATTTTGCCGCTGGTAGCCAGGACGCTTTTGTTGGCTTGATGAACAGCTACGTTAACGCACTGGGCCTGAAAAATACCCACTTCCAGACGGTACATGGTCTGGATGCTGATGGTCAGTACAGCTCCGCGCGAGATATGGCGCTGATCGGCCAGGCATTGATCCGTGACGTACCGAATGAATACTCGATCTATAAAGAAAAAGAATTTACGTTTAACGGTATTCGCCAGCTGAACCGTAACGGCCTGTTATGGGATAACAGCCTGAATGTCGACGGCATCAAAACCGGACACACTGACAAAGCAGGTTACAACCTTGTTGCTTCTGCGACTGAAGGCCAGATGCGCTTGATTTCTGCGGTAATGGGCGGACGTACTTTTAAAGGCCGTGAAGCCGAAAGTAAAAAACTGCTAACCTGGGGCTTCCGTTTCTTTGAAACCGTTAACCCACTGAAAGTAGGTAAAGAGTTCGCCTCTGAACCGGTTTGGTTTGGTGATTCTGATCGCGCTTCGTTAGGGGTTGATAAAGACGTGTACCTGACCATTCCGCGTGGTCGCATGAAAGATCTGAAAGCCAGCTATGTGCTGAACAGCAGTGAATTGCATGCGCCGCTGCAAAAGAATCAGGTCGTCGGAACTATCAACTTCCAGCTTGATGGCAAAACGATCGAGCAACGCCCGCTGGTTGTGTTGCAAGAAATCCCGGAAGGTAACTTCTTCGGCAAAATCATTGATTACATTAAATTAATGTTCCATCACTGGTTTGGTTAA", + "dna_sequence_length": 1212, + "functions": [ + "D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)" + ], + "id": "CDS_629", + "location": [ + [ + "NC_000913", + 663963, + "-", + 1212 + ] + ], + "md5": "87e910791981c6619e6f2540a17e7325", + "parent_gene": "", + "protein_md5": "67e71e11a5d766dba6838af555ed17d3", + "protein_translation": "MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002171" + ], + [ + "gene_synonym", + "ECK0626" + ], + [ + "gene_synonym", + "EcoGene:EG10854" + ], + [ + "gene_synonym", + "GI:16128616" + ], + [ + "gene_synonym", + "GeneID:945241" + ], + [ + "gene_synonym", + "JW0628" + ], + [ + "gene_synonym", + "NP_415166.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10100" + ], + [ + "gene_synonym", + "b0633" + ], + [ + "gene_synonym", + "rlpA" + ] + ], + "dna_sequence": "ATGCGTAAGCAGTGGCTCGGGATCTGCATCGCGGCAGGAATGCTCGCGGCATGTACAAGCGATGATGGTCAGCAACAGACGGTAAGTGTACCGCAGCCTGCGGTATGTAACGGCCCTATAGTTGAAATTAGCGGGGCGGACCCGCGTTTCGAACCACTGAACGCGACGGCAAATCAGGATTACCAGCGCGACGGTAAAAGCTACAAAATCGTGCAGGATCCGTCTCGATTTAGCCAGGCGGGACTGGCGGCAATCTATGATGCCGAACCCGGCAGTAACCTGACGGCCTCTGGCGAAGCATTCGATCCGACACAGCTGACGGCAGCCCATCCAACGCTTCCGATCCCCAGCTACGCCAGAATCACTAACCTGGCTAACGGGCGAATGATCGTGGTGCGCATTAATGATCGCGGCCCTTACGGCAACGACCGCGTTATTTCACTTTCTCGCGCGGCAGCTGACCGTCTTAACACGTCAAACAACACCAAAGTTCGTATCGATCCGATTATTGTTGCCCAGGATGGTTCGCTTTCTGGTCCTGGTATGGCTTGTACCACAGTCGCCAAACAGACTTACGCCCTGCCTGCACCTCCCGATTTAAGCGGTGGCGCGGGAACAAGTTCAGTGTCTGGCCCGCAGGGTGACATTCTTCCGGTCAGTAATTCGACGCTAAAAAGCGAAGATCCGACCGGCGCGCCGGTAACCAGTAGCGGTTTCCTCGGCGCACCAACGACCTTAGCGCCTGGTGTACTGGAAGGCAGCGAACCGACGCCTGCGCCACAGCCCGTTGTTACAGCTCCGTCGACAACGCCTGCAACCTCGCCTGCAATGGTGACACCGCAAGCCGTCTCGCAAAGCGCCAGCGGCAACTTTATGGTGCAAGTCGGGGCCGTAAGCGATCAGGCTCGTGCGCAACAGTACCAACAGCAACTGGGACAGAAGTTCGGCGTCCCCGGTCGCGTAACTCAAAATGGCGCGGTCTGGCGGATCCAGCTTGGCCCATTCGCCAGCAAAGCCGAAGCCAGTACCTTGCAGCAACGTTTGCAAACCGAAGCCCAATTACAGTCATTTATTACTACCGCGCAGTAG", + "dna_sequence_length": 1089, + "functions": [ + "septal ring protein, suppressor of prc, minor lipoprotein" + ], + "id": "CDS_630", + "location": [ + [ + "NC_000913", + 665190, + "-", + 1089 + ] + ], + "md5": "2c8e8011f3aeb75a156da6c110a16ef7", + "parent_gene": "", + "protein_md5": "c8906060f9b4083601cda27b0faebe4d", + "protein_translation": "MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEISGADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILPVSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPAMVTPQAVSQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFASKAEASTLQQRLQTEAQLQSFITTAQ", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002173" + ], + [ + "gene_synonym", + "ECK0627" + ], + [ + "gene_synonym", + "EcoGene:EG10607" + ], + [ + "gene_synonym", + "GI:16128617" + ], + [ + "gene_synonym", + "GeneID:945238" + ], + [ + "gene_synonym", + "JW0629" + ], + [ + "gene_synonym", + "NP_415167.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABG7" + ], + [ + "gene_synonym", + "b0634" + ], + [ + "gene_synonym", + "mrdB" + ], + [ + "gene_synonym", + "rodA" + ] + ], + "dna_sequence": "ATGACGGATAATCCGAATAAAAAAACATTCTGGGATAAAGTCCATCTCGATCCCACAATGCTGCTGATCTTACTGGCATTGCTGGTTTACAGCGCCCTGGTTATCTGGAGCGCCAGCGGTCAGGATATTGGCATGATGGAGCGTAAAATCGGCCAAATCGCGATGGGTCTGGTCATCATGGTGGTGATGGCGCAAATTCCTCCACGCGTTTATGAAGGCTGGGCCCCCTATCTCTATATCATCTGTATTATTTTGCTGGTGGCGGTAGATGCTTTCGGTGCCATCTCTAAAGGTGCTCAACGCTGGCTGGACCTCGGTATTGTTCGTTTTCAGCCGTCGGAAATTGCCAAAATAGCCGTACCACTGATGGTTGCGCGCTTTATCAACCGCGACGTTTGCCCGCCATCGTTGAAGAACACTGGCATCGCGCTGGTGCTGATATTTATGCCCACGCTGCTGGTGGCTGCACAGCCTGACCTGGGAACATCAATCCTCGTTGCGCTTTCCGGTCTGTTTGTACTGTTCCTCTCTGGCCTTAGCTGGCGTCTGATTGGCGTCGCAGTAGTGCTGGTAGCGGCGTTCATTCCGATTCTGTGGTTCTTCCTGATGCATGATTACCAGCGCCAGCGCGTAATGATGCTCCTGGACCCGGAATCAGACCCACTCGGCGCGGGCTATCACATTATTCAGTCTAAAATTGCTATTGGCTCCGGCGGATTACGCGGCAAAGGCTGGCTGCACGGCACTCAGTCACAGCTTGAATTTCTCCCCGAACGCCATACTGACTTTATCTTCGCGGTACTGGCGGAAGAGCTGGGATTAGTGGGCATTCTGATTCTGCTCGCTCTCTACATTCTGCTGATCATGCGCGGGCTGTGGATAGCCGCCAGAGCGCAAACCACCTTTGGTCGCGTCATGGCTGGCGGCTTAATGCTGATATTATTCGTTTATGTCTTCGTAAATATTGGTATGGTAAGCGGTATTCTGCCGGTTGTAGGGGTTCCGCTCCCACTGGTCAGTTATGGAGGATCGGCGCTAATTGTGCTGATGGCTGGGTTCGGGATTGTAATGTCAATCCACACCCACAGGAAAATGTTGTCGAAAAGCGTGTAA", + "dna_sequence_length": 1113, + "functions": [ + "cell wall shape-determining protein" + ], + "id": "CDS_631", + "location": [ + [ + "NC_000913", + 666313, + "-", + 1113 + ] + ], + "md5": "c125884edcac3d86c66273970cf52875", + "parent_gene": "", + "protein_md5": "24eac8a537c66db23cb62001a53e7a53", + "protein_translation": "MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002178" + ], + [ + "gene_synonym", + "ECK0628" + ], + [ + "gene_synonym", + "EcoGene:EG10606" + ], + [ + "gene_synonym", + "GI:16128618" + ], + [ + "gene_synonym", + "GeneID:945240" + ], + [ + "gene_synonym", + "JW0630" + ], + [ + "gene_synonym", + "NP_415168.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD65" + ], + [ + "gene_synonym", + "b0635" + ], + [ + "gene_synonym", + "mrdA" + ], + [ + "gene_synonym", + "pbpA" + ] + ], + "dna_sequence": "ATGAAACTACAGAACTCTTTTCGCGACTATACGGCAGAGTCCGCGCTGTTTGTGCGCCGGGCGCTGGTCGCCTTTTTGGGGATTTTGCTGCTGACCGGCGTGCTTATCGCCAACCTGTATAATCTGCAAATTGTTCGCTTTACCGACTACCAGACCCGCTCTAATGAAAACCGCATTAAGCTGGTGCCTATCGCGCCCAGCCGCGGCATTATCTACGATCGTAACGGTATCCCTCTGGCCCTCAACCGCACTATCTACCAGATAGAAATGATGCCGGAGAAAGTCGATAACGTGCAGCAAACGCTGGACGCTTTGCGCAGCGTGGTAGATCTGACCGATGACGATATTGCTGCATTCCGAAAAGAGCGCGCACGTTCACACCGTTTCACCTCTATTCCGGTGAAAACTAACCTGACCGAAGTACAAGTAGCTCGCTTTGCCGTCAATCAGTACCGTTTTCCGGGTGTCGAAGTTAAAGGCTATAAACGTCGTTACTATCCTTACGGTTCGGCGTTGACCCACGTCATCGGCTATGTGTCGAAAATCAACGATAAAGACGTCGAACGCCTGAATAATGACGGCAAACTGGCCAACTATGCGGCAACGCATGATATCGGTAAGCTGGGCATTGAGCGTTACTATGAAGATGTGCTGCACGGTCAGACCGGTTATGAAGAGGTTGAAGTTAACAACCGTGGGCGTGTTATTCGCCAGTTAAAAGAAGTACCACCGCAAGCCGGACACGATATTTACCTGACGCTGGATCTCAAACTCCAGCAATATATTGAAACGCTGCTGGCGGGTAGCCGCGCAGCTGTGGTAGTCACCGATCCGCGTACAGGTGGGGTGCTGGCGCTGGTTTCCACGCCTAGTTATGACCCAAACTTGTTTGTTGACGGTATCTCCAGCAAAGATTATTCCGCCTTGTTGAACGATCCGAATACACCGCTGGTGAACCGCGCCACACAGGGGGTTTATCCTCCCGCGTCTACAGTTAAACCCTATGTGGCGGTTTCGGCATTGAGCGCCGGGGTGATCACGCGCAATACGACGCTGTTTGACCCAGGCTGGTGGCAACTGCCAGGTTCGGAAAAACGTTATCGTGACTGGAAAAAATGGGGCCACGGGCGTCTGAATGTCACAAGATCGCTGGAAGAATCTGCGGATACCTTCTTCTATCAGGTGGCCTACGATATGGGGATCGATCGCCTCTCCGAATGGATGGGTAAATTCGGTTATGGTCATTACACCGGTATCGACCTGGCGGAAGAACGTTCCGGCAACATGCCTACCCGCGAATGGAAACAGAAACGCTTTAAAAAACCGTGGTATCAGGGTGACACCATTCCGGTTGGTATCGGTCAGGGTTACTGGACAGCGACCCCAATCCAGATGAGTAAGGCACTGATGATCCTGATTAATGACGGTATCGTGAAGGTTCCTCATTTGCTGATGAGCACCGCCGAAGACGGCAAACAGGTGCCATGGGTACAGCCGCATGAACCGCCCGTCGGCGATATTCATTCCGGTTACTGGGAGCTGGCGAAAGACGGTATGTACGGTGTTGCTAACCGCCCTAACGGTACGGCGCATAAATACTTTGCTAGCGCACCGTACAAAATTGCGGCGAAATCCGGTACCGCTCAGGTCTTCGGTCTGAAAGCGAACGAAACCTATAATGCGCACAAAATTGCCGAGCGTTTACGTGACCACAAACTGATGACCGCCTTTGCGCCATACAACAATCCGCAAGTGGCTGTCGCCATGATTCTGGAGAACGGTGGTGCGGGTCCGGCGGTTGGTACACTGATGCGCCAGATCCTCGACCACATTATGCTGGGTGATAACAACACCGATCTGCCTGCGGAAAATCCAGCGGTTGCCGCAGCGGAGGACCATTAA", + "dna_sequence_length": 1902, + "functions": [ + "penicillin-binding protein 2, transpeptidase involved in peptidoglycan synthesis" + ], + "id": "CDS_632", + "location": [ + [ + "NC_000913", + 668217, + "-", + 1902 + ] + ], + "md5": "7288af6ad5ed8faf92d51688f154d3a1", + "parent_gene": "", + "protein_md5": "9619fb5669adb8b1a2ab49236511e1c7", + "protein_translation": "MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAENPAVAAAEDH", + "protein_translation_length": 633, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002180" + ], + [ + "gene_synonym", + "ECK0629" + ], + [ + "gene_synonym", + "EcoGene:EG11254" + ], + [ + "gene_synonym", + "GI:16128619" + ], + [ + "gene_synonym", + "GeneID:945239" + ], + [ + "gene_synonym", + "JW0631" + ], + [ + "gene_synonym", + "NP_415169.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8I8" + ], + [ + "gene_synonym", + "b0636" + ], + [ + "gene_synonym", + "rlmH" + ], + [ + "gene_synonym", + "ybeA" + ] + ], + "dna_sequence": "GTGAAGCTGCAACTTGTCGCCGTGGGAACGAAAATGCCGGACTGGGTACAAACCGGTTTTACCGAGTACCTGCGTCGTTTTCCGAAAGATATGCCCTTCGAGCTGATTGAAATTCCGGCCGGAAAACGCGGCAAGAATGCGGACATCAAGCGCATACTCGACAAAGAGGGTGAGCAGATGTTGGCGGCCGCAGGCAAAAACCGCATTGTCACCCTCGATATTCCAGGCAAGCCCTGGGATACGCCGCAGTTAGCCGCTGAGCTGGAACGCTGGAAGCTGGATGGTCGCGACGTCAGTCTACTGATTGGCGGGCCTGAAGGGTTGTCGCCTGCCTGTAAAGCGGCGGCTGAGCAGAGCTGGTCGCTGTCGGCGCTTACCCTCCCCCATCCGCTGGTTCGCGTGCTGGTCGCAGAGAGTCTGTACCGGGCGTGGAGCATCACCACCAACCATCCTTATCACCGTGAGTGA", + "dna_sequence_length": 468, + "functions": [ + "23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent" + ], + "id": "CDS_633", + "location": [ + [ + "NC_000913", + 668715, + "-", + 468 + ] + ], + "md5": "ea3cce419e80de0d79fdd6aa502601aa", + "parent_gene": "", + "protein_md5": "5fc3738261349ba33cb39af70226d356", + "protein_translation": "MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002183" + ], + [ + "gene_synonym", + "ECK0630" + ], + [ + "gene_synonym", + "EcoGene:EG11255" + ], + [ + "gene_synonym", + "GI:90111157" + ], + [ + "gene_synonym", + "GeneID:945237" + ], + [ + "gene_synonym", + "JW5090" + ], + [ + "gene_synonym", + "NP_415170.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAT6" + ], + [ + "gene_synonym", + "b0637" + ], + [ + "gene_synonym", + "rsfA" + ], + [ + "gene_synonym", + "rsfS" + ], + [ + "gene_synonym", + "slm3" + ], + [ + "gene_synonym", + "ybeB" + ] + ], + "dna_sequence": "TTGCAGGGTAAAGCACTCCAGGATTTTGTTATCGACAAAATTGATGACCTCAAAGGTCAGGACATCATCGCCTTAGACGTTCAGGGCAAATCCAGCATCACCGACTGCATGATCATCTGTACGGGTACGTCCAGCCGTCATGTTATGTCCATTGCTGACCACGTTGTGCAGGAGTCTCGCGCAGCGGGCCTGTTACCGCTCGGCGTAGAAGGTGAAAACAGCGCCGACTGGATTGTCGTGGATTTGGGCGATGTGATTGTCCATGTCATGCAGGAAGAGAGCCGTCGCCTGTATGAACTGGAAAAACTCTGGAGTTAA", + "dna_sequence_length": 318, + "functions": [ + "ribosomal silencing factor" + ], + "id": "CDS_634", + "location": [ + [ + "NC_000913", + 669036, + "-", + 318 + ] + ], + "md5": "57dec0fe0410a318fe4aef54e19ae66f", + "parent_gene": "", + "protein_md5": "6721040d4f79d96c0e941789abf8c5bf", + "protein_translation": "MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002185" + ], + [ + "gene_synonym", + "ECK0631" + ], + [ + "gene_synonym", + "EcoGene:EG13240" + ], + [ + "gene_synonym", + "GI:16128621" + ], + [ + "gene_synonym", + "GeneID:945246" + ], + [ + "gene_synonym", + "JW0633" + ], + [ + "gene_synonym", + "NP_415171.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52086" + ], + [ + "gene_synonym", + "b0638" + ], + [ + "gene_synonym", + "cobC" + ], + [ + "gene_synonym", + "phpB" + ] + ], + "dna_sequence": "ATGCGACTGTGGTTAATTCGTCATGGTGAAACGCAAGCGAATATCGATGGTCTTTACAGCGGTCATGCGCCCACCCCCCTGACCGCGCGCGGTATTGAGCAAGCGCAAAATCTGCATACGCTGCTACATGGTGTTTCCTTTGATCTGGTTTTATGCAGTGAACTGGAACGGGCACAGCATACCGCGCGACTGGTTCTCAGTGACCGCCAGCTCCCCGTGCAAATCATACCTGAACTCAACGAAATGTTTTTTGGCGACTGGGAGATGCGACATCATCGCGACCTCATGCAAGAAGATGCCGAAAACTATAGCGCGTGGTGCAATGACTGGCAGCATGCAATCCCCACGAACGGTGAAGGATTTCAGGCATTTTCGCAACGTGTGGAACGCTTTATCGCAAGGCTTAGTGAATTTCAGCACTATCAGAATATTTTAGTCGTCAGCCATCAGGGTGTACTGAGTCTGTTAATCGCCCGTTTAATTGGCATGCCTGCCGAAGCTATGTGGCATTTTCGCGTTGACCAGGGGTGTTGGAGCGCCATTGATATCAACCAAAAATTCGCGACGCTACGCGTCCTCAATAGCCGTGCCATCGGGGTCGAGAATGCATGA", + "dna_sequence_length": 612, + "functions": [ + "putative alpha-ribazole-5'-P phosphatase" + ], + "id": "CDS_635", + "location": [ + [ + "NC_000913", + 669907, + "-", + 612 + ] + ], + "md5": "42a1a2cf0e56d1f4642faa74a391f958", + "parent_gene": "", + "protein_md5": "7f7a8d3ef3b57e1918ac8a6bec189526", + "protein_translation": "MRLWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHGVSFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLIGMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002187" + ], + [ + "gene_synonym", + "ECK0632" + ], + [ + "gene_synonym", + "EcoGene:EG13241" + ], + [ + "gene_synonym", + "GI:16128622" + ], + [ + "gene_synonym", + "GeneID:945248" + ], + [ + "gene_synonym", + "JW0634" + ], + [ + "gene_synonym", + "NP_415172.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A752" + ], + [ + "gene_synonym", + "b0639" + ], + [ + "gene_synonym", + "fusB" + ], + [ + "gene_synonym", + "nadD" + ], + [ + "gene_synonym", + "ybeN" + ] + ], + "dna_sequence": "ATGAAATCTTTACAGGCTCTGTTTGGCGGCACCTTTGATCCGGTGCACTATGGTCATCTAAAACCCGTGGAAACGCTGGCGAATTTGATTGGTCTGACGCGGGTCACAATCATCCCTAATAATGTTCCTCCGCATCGTCCCCAGCCGGAAGCGAACAGCGTGCAGCGTAAACACATGCTTGAACTGGCGATTGCCGACAAGCCATTATTTACTCTTGATGAACGCGAGCTAAAGCGCAATGCCCCCTCTTACACTGCGCAAACACTGAAAGAGTGGCGGCAGGAACAAGGACCGGACGTGCCGCTGGCGTTTATTATTGGTCAGGATTCACTGCTGACCTTTCCGACCTGGTACGAATACGAAACGATACTCGACAATGCACATTTGATCGTCTGTCGGCGTCCAGGTTACCCACTTGAAATGGCGCAACCGCAATACCAGCAATGGCTGGAAGATCATTTGACACATAACCCGGAAGATCTTCACCTTCAGCCTGCCGGTAAAATTTATCTGGCTGAAACGCCGTGGTTTAACATCTCGGCGACCATCATCCGCGAACGTTTGCAAAACGGTGAATCATGTGAGGATTTATTGCCGGAACCGGTACTGACTTACATTAACCAACAAGGCTTGTATCGCTGA", + "dna_sequence_length": 642, + "functions": [ + "nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent" + ], + "id": "CDS_636", + "location": [ + [ + "NC_000913", + 670572, + "-", + 642 + ] + ], + "md5": "dfc40d3d2bf93dd21a0da80e947be761", + "parent_gene": "", + "protein_md5": "5b1d4e45bb80d6e0c2b893a43498207d", + "protein_translation": "MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002192" + ], + [ + "gene_synonym", + "ECK0633" + ], + [ + "gene_synonym", + "EcoGene:EG11412" + ], + [ + "gene_synonym", + "GI:16128623" + ], + [ + "gene_synonym", + "GeneID:947573" + ], + [ + "gene_synonym", + "JW0635" + ], + [ + "gene_synonym", + "NP_415173.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28630" + ], + [ + "gene_synonym", + "b0640" + ], + [ + "gene_synonym", + "holA" + ] + ], + "dna_sequence": "ATGATTCGGTTGTACCCGGAACAACTCCGCGCGCAGCTCAATGAAGGGCTGCGCGCGGCGTATCTTTTACTTGGTAACGATCCTCTGTTATTGCAGGAAAGCCAGGACGCTGTTCGTCAGGTAGCTGCGGCACAAGGATTCGAAGAACACCACACTTTTTCCATTGATCCCAACACTGACTGGAATGCGATCTTTTCGTTATGCCAGGCTATGAGTCTGTTTGCCAGTCGACAAACGCTATTGCTGTTGTTACCAGAAAACGGACCGAATGCGGCGATCAATGAGCAACTTCTCACACTCACCGGACTTCTGCATGACGACCTGCTGTTGATCGTCCGCGGTAATAAATTAAGCAAAGCGCAAGAAAATGCCGCCTGGTTTACTGCGCTTGCGAATCGCAGCGTGCAGGTGACCTGTCAGACACCGGAGCAGGCTCAGCTTCCCCGCTGGGTTGCTGCGCGCGCAAAACAGCTCAACTTAGAACTGGATGACGCGGCAAATCAGGTGCTCTGCTACTGTTATGAAGGTAACCTGCTGGCGCTGGCTCAGGCACTGGAGCGTTTATCGCTGCTCTGGCCAGACGGCAAATTGACATTACCGCGCGTTGAACAGGCGGTGAATGATGCCGCGCATTTCACCCCTTTTCATTGGGTTGATGCTTTGTTGATGGGAAAAAGTAAGCGCGCATTGCATATTCTTCAGCAACTGCGTCTGGAAGGCAGCGAACCGGTTATTTTGTTGCGCACATTACAACGTGAACTGTTGTTACTGGTTAACCTGAAACGCCAGTCTGCCCATACGCCACTGCGTGCGTTGTTTGATAAGCATCGGGTATGGCAGAACCGCCGGGGCATGATGGGCGAGGCGTTAAATCGCTTAAGTCAGACGCAGTTACGTCAGGCCGTGCAACTCCTGACACGAACGGAACTCACCCTCAAACAAGATTACGGTCAGTCAGTGTGGGCAGAGCTGGAAGGGTTATCTCTTCTGTTGTGCCATAAACCCCTGGCGGACGTATTTATCGACGGTTGA", + "dna_sequence_length": 1032, + "functions": [ + "DNA polymerase III, delta subunit" + ], + "id": "CDS_637", + "location": [ + [ + "NC_000913", + 671605, + "-", + 1032 + ] + ], + "md5": "067fc8407a008805170b0d89e9f59c05", + "parent_gene": "", + "protein_md5": "d420ec64e1ef900f7a6cf9cdb1cd1e1f", + "protein_translation": "MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002194" + ], + [ + "gene_synonym", + "ECK0634" + ], + [ + "gene_synonym", + "EcoGene:EG10855" + ], + [ + "gene_synonym", + "GI:16128624" + ], + [ + "gene_synonym", + "GeneID:946257" + ], + [ + "gene_synonym", + "JW0636" + ], + [ + "gene_synonym", + "NP_415174.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC1" + ], + [ + "gene_synonym", + "b0641" + ], + [ + "gene_synonym", + "lptE" + ], + [ + "gene_synonym", + "rlpB" + ] + ], + "dna_sequence": "GTGCGATATCTGGCAACATTGTTGTTATCTCTGGCGGTGTTAATCACCGCCGGGTGTGGCTGGCATCTGCGTGATACCACGCAGGTTCCTTCCACTATGAAGGTCATGATCCTGGACTCAGGCGATCCGAACGGGCCATTAAGCCGTGCGGTGCGTAACCAGTTACGTCTGAATGGTGTCGAGTTGCTTGATAAAGAAACCACGCGTAAGGACGTTCCATCCTTGCGTTTGGGTAAAGTGAGCATCGCGAAAGATACCGCATCGGTATTCCGTAACGGTCAAACAGCAGAGTATCAGATGATCATGACGGTTAATGCGACCGTGTTGATCCCCGGCCGTGATATCTACCCGATTAGCGCCAAAGTCTTCCGTTCGTTCTTCGATAACCCGCAAATGGCGTTAGCGAAAGATAACGAACAAGACATGATCGTAAAAGAGATGTACGACCGTGCTGCCGAACAGCTGATTCGTAAGCTGCCAAGCATCCGTGCTGCGGATATTCGTTCCGACGAAGAACAGACGTCGACCACAACGGATACTCCGGCAACGCCTGCACGCGTCTCCACCACGCTGGGTAACTGA", + "dna_sequence_length": 582, + "functions": [ + "LPS assembly OM complex LptDE, lipoprotein component" + ], + "id": "CDS_638", + "location": [ + [ + "NC_000913", + 672186, + "-", + 582 + ] + ], + "md5": "035c0b79640a28ab2719d0da8095d89d", + "parent_gene": "", + "protein_md5": "e7ec6a3e31a15a30f8d6904a026cdfe7", + "protein_translation": "MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDEEQTSTTTDTPATPARVSTTLGN", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002196" + ], + [ + "gene_synonym", + "ECK0635" + ], + [ + "gene_synonym", + "EcoGene:EG10532" + ], + [ + "gene_synonym", + "GI:16128625" + ], + [ + "gene_synonym", + "GeneID:947497" + ], + [ + "gene_synonym", + "JW0637" + ], + [ + "gene_synonym", + "NP_415175.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07813" + ], + [ + "gene_synonym", + "b0642" + ], + [ + "gene_synonym", + "leuS" + ] + ], + "dna_sequence": "ATGCAAGAGCAATACCGCCCGGAAGAGATAGAATCCAAAGTACAGCTTCATTGGGATGAGAAGCGCACATTTGAAGTAACCGAAGACGAGAGCAAAGAGAAGTATTACTGCCTGTCTATGCTTCCCTATCCTTCTGGTCGACTACACATGGGCCACGTACGTAACTACACCATCGGTGACGTGATCGCCCGCTACCAGCGTATGCTGGGCAAAAACGTCCTGCAGCCGATCGGCTGGGACGCGTTTGGTCTGCCTGCGGAAGGCGCGGCGGTGAAAAACAACACCGCTCCGGCACCGTGGACGTACGACAACATCGCGTATATGAAAAACCAGCTCAAAATGCTGGGCTTTGGTTATGACTGGAGCCGCGAGCTGGCAACCTGTACGCCGGAATACTACCGTTGGGAACAGAAATTCTTCACCGAGCTGTATAAAAAAGGCCTGGTATATAAGAAGACTTCTGCGGTCAACTGGTGCCCGAACGACCAGACCGTACTGGCGAACGAACAAGTTATCGACGGCTGCTGCTGGCGCTGCGATACCAAAGTTGAACGTAAAGAGATCCCGCAGTGGTTTATCAAAATCACTGCTTACGCTGACGAGCTGCTCAACGATCTGGATAAACTGGATCACTGGCCAGACACCGTTAAAACCATGCAGCGTAACTGGATCGGTCGTTCCGAAGGCGTGGAGATCACCTTCAACGTTAACGACTATGACAACACGCTGACCGTTTACACTACCCGCCCGGACACCTTTATGGGTTGTACCTACCTGGCGGTAGCTGCGGGTCATCCGCTGGCGCAGAAAGCGGCGGAAAATAATCCTGAACTGGCGGCCTTTATTGACGAATGCCGTAACACCAAAGTTGCCGAAGCTGAAATGGCGACGATGGAGAAAAAAGGCGTCGATACTGGCTTTAAAGCGGTTCACCCATTAACGGGCGAAGAAATTCCCGTTTGGGCAGCAAACTTCGTATTGATGGAGTACGGCACGGGCGCAGTTATGGCGGTACCGGGGCACGACCAGCGCGACTACGAGTTTGCCTCTAAATACGGCCTGAACATCAAACCGGTTATCCTGGCAGCTGACGGCTCTGAGCCAGATCTTTCTCAGCAAGCCCTGACTGAAAAAGGCGTGCTGTTCAACTCTGGCGAGTTCAACGGTCTTGACCATGAAGCGGCCTTCAACGCCATCGCCGATAAACTGACTGCGATGGGCGTTGGCGAGCGTAAAGTGAACTACCGCCTGCGCGACTGGGGTGTTTCCCGTCAGCGTTACTGGGGCGCGCCGATTCCGATGGTGACGCTGGAAGACGGTACCGTAATGCCGACCCCGGACGACCAGCTGCCGGTGATCCTGCCGGAAGATGTGGTAATGGACGGCATTACCAGCCCGATTAAAGCAGATCCGGAGTGGGCGAAAACTACCGTTAACGGTATGCCAGCACTGCGTGAAACCGACACTTTCGACACCTTTATGGAGTCCTCCTGGTACTATGCGCGCTACACTTGCCCGCAGTACAAAGAAGGTATGCTGGATTCCGAAGCGGCTAACTACTGGCTGCCGGTGGATATCTACATTGGTGGTATTGAACACGCCATTATGCACCTGCTCTACTTCCGCTTCTTCCACAAACTGATGCGTGATGCAGGCATGGTGAACTCTGACGAACCAGCGAAACAGTTGCTGTGTCAGGGTATGGTGCTGGCAGATGCCTTCTACTATGTTGGCGAAAACGGCGAACGTAACTGGGTTTCCCCGGTTGATGCTATCGTTGAACGTGACGAGAAAGGCCGTATCGTGAAAGCGAAAGATGCGGCAGGCCATGAACTGGTTTATACCGGCATGAGCAAAATGTCCAAGTCGAAGAACAACGGTATCGACCCGCAGGTGATGGTTGAACGTTACGGCGCGGACACCGTTCGTCTGTTTATGATGTTTGCTTCTCCGGCTGATATGACTCTCGAATGGCAGGAATCCGGTGTGGAAGGGGCTAACCGCTTCCTGAAACGTGTCTGGAAACTGGTTTACGAGCACACAGCAAAAGGTGATGTTGCGGCACTGAACGTTGATGCGCTGACTGAAAATCAGAAAGCGCTGCGTCGCGATGTGCATAAAACGATCGCTAAAGTGACCGATGATATCGGCCGTCGTCAGACCTTCAACACCGCAATTGCGGCGATTATGGAGCTGATGAACAAACTGGCGAAAGCACCAACCGATGGCGAGCAGGATCGCGCTCTGATGCAGGAAGCACTGCTGGCCGTTGTCCGTATGCTTAACCCGTTCACCCCGCACATCTGCTTCACGCTGTGGCAGGAACTGAAAGGCGAAGGCGATATCGACAACGCGCCGTGGCCGGTTGCTGACGAAAAAGCGATGGTGGAAGACTCCACGCTGGTCGTGGTGCAGGTTAACGGTAAAGTCCGTGCCAAAATCACCGTTCCGGTGGACGCAACGGAAGAACAGGTTCGCGAACGTGCTGGCCAGGAACATCTGGTAGCAAAATATCTTGATGGCGTTACTGTACGTAAAGTGATTTACGTACCAGGTAAACTCCTCAATCTGGTCGTTGGCTAA", + "dna_sequence_length": 2583, + "functions": [ + "leucyl-tRNA synthetase" + ], + "id": "CDS_639", + "location": [ + [ + "NC_000913", + 674783, + "-", + 2583 + ] + ], + "md5": "a12d9bc839e7d98cda416f53d11062a2", + "parent_gene": "", + "protein_md5": "9f714626b76955acaafd600c07ba1299", + "protein_translation": "MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG", + "protein_translation_length": 860, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002199" + ], + [ + "gene_synonym", + "ECK0636" + ], + [ + "gene_synonym", + "EcoGene:EG12851" + ], + [ + "gene_synonym", + "GI:16128626" + ], + [ + "gene_synonym", + "GeneID:945252" + ], + [ + "gene_synonym", + "JW0638" + ], + [ + "gene_synonym", + "NP_415176.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAT9" + ], + [ + "gene_synonym", + "b0643" + ], + [ + "gene_synonym", + "ybeL" + ] + ], + "dna_sequence": "ATGAACAAGGTTGCTCAATATTACCGTGAACTGGTTGCGTCACTGAGCGAACGCCTGCGCAATGGCGAACGTGATATCGACGCACTGGTGGAACAGGCGCGCGAGCGCGTAATAAAAACAGGGGAGTTAACGCGAACCGAGGTCGATGAGCTGACGCGAGCTGTCAGACGTGACCTGGAAGAGTTCGCCATGAGCTATGAAGAGAGCCTGAAAGAAGAATCTGACAGCGTCTTTATGCGGGTGATTAAAGAAAGCTTGTGGCAGGAGCTGGCAGACATCACCGATAAAACGCAGCTTGAATGGCGCGAAGTTTTCCAGGACCTCAATCATCATGGGGTTTATCACAGCGGAGAAGTGGTCGGGCTGGGAAATCTGGTCTGCGAGAAATGTCACTTCCATCTCCCGATCTACACACCGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAA", + "dna_sequence_length": 483, + "functions": [ + "DUF1451 family protein" + ], + "id": "CDS_640", + "location": [ + [ + "NC_000913", + 675018, + "+", + 483 + ] + ], + "md5": "a5c249de47936715ee3b09643b1a3ebb", + "parent_gene": "", + "protein_md5": "0754593e315c348cebd3f7d40cdf821f", + "protein_translation": "MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002201" + ], + [ + "gene_synonym", + "ECK0637" + ], + [ + "gene_synonym", + "EcoGene:EG13647" + ], + [ + "gene_synonym", + "GI:90111158" + ], + [ + "gene_synonym", + "GeneID:945251" + ], + [ + "gene_synonym", + "JW5091" + ], + [ + "gene_synonym", + "NP_415177.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77234" + ], + [ + "gene_synonym", + "b0644" + ], + [ + "gene_synonym", + "ybeQ" + ] + ], + "dna_sequence": "ATGATTTTCACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTGCGAGGCTCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGATTCTCCGGACGACGAAAAAGCCTTTTACTGGCTGAAGCTGGCCGCTGAGCAAGGTCATTGTGAAGCACAGTATTCCTTAGGGCAAAAGTATACCGAGGATAAAAGCCGTCATAAAGATAATGAGCAAGCCATCTTCTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGGCTGGACACTGGATCGTGGAGAAGCCCCCAATTATAAAGAAGCGGTTGTCTGGTATCAGATAGCCGCGGAGAGCGGAATGTCTTATGCGCAAAATAATCTTGGGTGGATGTACAGAAATGGCAACGGAGTCGCAAAAGACTATGCGCTGGCATTTTTCTGGTACAAACAAGCTGCATTACAAGGCCATAGTGACGCGCAAAACAATCTGGCCGATCTTTATGAAGACGGAAAAGGCGTTGCTCAAAACAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCACGCCCAGTTTCAAATTGCATGGGATTATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGGGAGCGTCGGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCTGCCTTTGAATGGTTTACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAAGACCTGTCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGAACCAGAGATGTCAGTCAGGAAATTCGTGAGACTGAAGATTTACTGTAG", + "dna_sequence_length": 978, + "functions": [ + "Sel1 family TPR-like repeat protein" + ], + "id": "CDS_641", + "location": [ + [ + "NC_000913", + 676547, + "-", + 978 + ] + ], + "md5": "239c1fc9e1b3103c6ba5d4f9c3aa0891", + "parent_gene": "", + "protein_md5": "13c99c912d729e56fb36e3029633cbc2", + "protein_translation": "MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002208" + ], + [ + "gene_synonym", + "ECK0638" + ], + [ + "gene_synonym", + "EcoGene:EG13648" + ], + [ + "gene_synonym", + "GI:16128628" + ], + [ + "gene_synonym", + "GeneID:945249" + ], + [ + "gene_synonym", + "JW0640" + ], + [ + "gene_synonym", + "NP_415178.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77627" + ], + [ + "gene_synonym", + "b0645" + ], + [ + "gene_synonym", + "ybeR" + ] + ], + "dna_sequence": "ATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGCTGCGCACAATTCACCGAATGATCGATAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCGCCATGTGAATGGCGTGACTATCTTGCTGAACTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACCGCCGAATGCTGTGGCGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATATTGGCAGTCTCCCGAAGATGATCATCTGCCTTTATTACGCGAATTCTTAGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGATGATGCGTATTACCCTACCTTGTCCTGGCAACCATTGGCTTACTATTCTGCATGCCCGGAAACGCTTAAGGATATGAGCGACCTATGA", + "dna_sequence_length": 708, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_642", + "location": [ + [ + "NC_000913", + 676711, + "+", + 708 + ] + ], + "md5": "e081c23b35e50e12a94795649530b6a5", + "parent_gene": "", + "protein_md5": "ab362db21b0f249709d100eb2f0b9908", + "protein_translation": "MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002210" + ], + [ + "gene_synonym", + "ECK0639" + ], + [ + "gene_synonym", + "EcoGene:EG13649" + ], + [ + "gene_synonym", + "GI:16128629" + ], + [ + "gene_synonym", + "GeneID:945245" + ], + [ + "gene_synonym", + "JW0641" + ], + [ + "gene_synonym", + "NP_415179.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77381" + ], + [ + "gene_synonym", + "b0646" + ], + [ + "gene_synonym", + "djlB" + ], + [ + "gene_synonym", + "ybeS" + ] + ], + "dna_sequence": "ATGAAAAATTGCTGGAAGATCCTCGATATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCGTCCTTTCATCCAGAAACCGATCCGCAGGGTTTTAAACAACTTCGTCAGGCGTATGAGGAGGCGCTACGGATTGCGCAGTCGCCTGCTAAATCTGTTTGGCAACCAGAAGAATATGAGGTAGCAGAACATGAAATTCTGCTCGCCTTTCGTGCGTTACTTGCCTCTGATAGTGAACGTTTTCTGCCCTCCGCCTGGCAGCGATTCATTCAGCAATTAAATTATTGCTCGATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGGCGCGAGTATCCCTCCACCCAGGCGGATGCTTTAATGTTGCAATGGTGCCGTCAGCATCGGGTCGATTATTACCCATTACTGGTGATGATGATTGAAGCGCGTGATCTGGTTAACGATCAGGGAAAACCGCTACTTTATGTCCCCGGCGACAGCGCCCGTACGCGTTTTCATTTATACGAAATACTCAGCGATGAAAAACTCTCTGCGCTGGGGCGTTCACTGGTCGAGATGGTTTTGCACAAAGGACGTAAGCCGCGGATCTCACTCACGCGTGATACAGAACATACCTTATGGCCATTATATCTAGTTGCCAAACAATTAGTGCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCATCATTAAAATTATTTTCTATATTTTTATCTTTGCTGGTTTGATAGGGAAAATACTCCATCTGTTCGGGTGA", + "dna_sequence_length": 1428, + "functions": [ + "putative HscC co-chaperone, uncharacterized J domain-containing protein" + ], + "id": "CDS_643", + "location": [ + [ + "NC_000913", + 677415, + "+", + 1428 + ] + ], + "md5": "b146f5305c96f0ad244eb5c7fe3e9997", + "parent_gene": "", + "protein_md5": "01f74ce912ededadd934eb9a80bfaafa", + "protein_translation": "MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQAYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNYCSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENTGEIDEEELESFLYAIAKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPQWLTLYLAQHRAVIIPDDAKLHRNLLRWYSAGRLDIPELLDYAQSWRETEPDNEDAPYYEYAQRVYCGEGESLLAELCDYWREYPSTQADALMLQWCRQHRVDYYPLLVMMIEARDLVNDQGKPLLYVPGDSARTRFHLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHTLWPLYLVAKQLVQACQPTEESLMPIVSRLDAENRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGCLGIIKIIFYIFIFAGLIGKILHLFG", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002213" + ], + [ + "gene_synonym", + "ECK0640" + ], + [ + "gene_synonym", + "EcoGene:EG13650" + ], + [ + "gene_synonym", + "GI:16128630" + ], + [ + "gene_synonym", + "GeneID:945243" + ], + [ + "gene_synonym", + "JW0642" + ], + [ + "gene_synonym", + "NP_415180.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77296" + ], + [ + "gene_synonym", + "b0647" + ], + [ + "gene_synonym", + "ybeT" + ] + ], + "dna_sequence": "ATGAATAAAAAATTAATGTATATATTCGCAATTTTTATAGTTGCAGCAATTACCTGTATTAGCCAACCCAAGAAAACGACGTTGCGTGATAAAGCCATGGTGAATTATGCCTTTGATTATTTAAGCTCACCGGGCAGTCTTCCATTCACCACGGCAGCCACGGAGCTTTCCGCGATTCATGGTCACTCAACGTCGCAATATCGCCTTGGAGAATTTTATCTTCATGGTAGCGACGGTAAACCACTGGATTATACACAGGCGAGATACTGGTATGAGCAATCAGCGGAACAGGAAAATCCACGCGCGCAAAGTAAACTGGGGTGGATCTACCTCAAAGGTCTGGGGGTCAAACCCGACACCCGTAAAGCAATTCTCTGGTATAAGGAAGCAGCTGAACAAGGGTATGCTCATGCTCAATATACTTTAGGTTTGATCTACAGAAATGGCTCAGGTATTAATGTTAACCATTATGAATCTCAAAAATGGTTAAAACTGACCGCCAAACAACATTACAAAAATGCGGAAAGATTACTTGCCGGGCTTCCCGCACATTAA", + "dna_sequence_length": 555, + "functions": [ + "Sel1 family TPR-like repeat protein" + ], + "id": "CDS_644", + "location": [ + [ + "NC_000913", + 679406, + "-", + 555 + ] + ], + "md5": "57107a1963591612537c8b55ae9fc8a2", + "parent_gene": "", + "protein_md5": "6422895354a07641705e2f084092d184", + "protein_translation": "MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002220" + ], + [ + "gene_synonym", + "ECK0641" + ], + [ + "gene_synonym", + "EcoGene:EG13651" + ], + [ + "gene_synonym", + "GI:16128631" + ], + [ + "gene_synonym", + "GeneID:945244" + ], + [ + "gene_synonym", + "JW0643" + ], + [ + "gene_synonym", + "NP_415181.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77427" + ], + [ + "gene_synonym", + "b0648" + ], + [ + "gene_synonym", + "ybeU" + ] + ], + "dna_sequence": "ATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAAGAATTCGAGCTCTCATCATCCTGGGGAATAAATAATCGTGATGATTTAATTCAGACTATTTATCAGATGACTGATGATGGTCATGCCAATGATTTAGCTGGCTTATATCTGACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCCGGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGA", + "dna_sequence_length": 708, + "functions": [ + "DUF1266 family protein" + ], + "id": "CDS_645", + "location": [ + [ + "NC_000913", + 679508, + "+", + 708 + ] + ], + "md5": "1ec9baacabb994b073db04b81d84bd37", + "parent_gene": "", + "protein_md5": "c9de11f5a6cd99a2e901aae6b553e747", + "protein_translation": "MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSSWGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQSECPVTLKDVSDL", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002222" + ], + [ + "gene_synonym", + "ECK0642" + ], + [ + "gene_synonym", + "EcoGene:EG13652" + ], + [ + "gene_synonym", + "GI:16128632" + ], + [ + "gene_synonym", + "GeneID:945253" + ], + [ + "gene_synonym", + "JW0644" + ], + [ + "gene_synonym", + "NP_415182.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77359" + ], + [ + "gene_synonym", + "b0649" + ], + [ + "gene_synonym", + "djlC" + ], + [ + "gene_synonym", + "hscD" + ], + [ + "gene_synonym", + "ybeV" + ] + ], + "dna_sequence": "ATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCTTACCGTTGTGTCATCCCGAAACCGATCCGCAAGGGTTTAAAGCATTACGCCAGGCCTATGAAGAGGCCCTGCGACTGGCGGTAAATCCTGTCGAGGAAGCAGATGATGAAGAAAAAGATGCTGCCGCTGAACATGAAATACTACGTGCATTCAGGACATTACTGGATTCAGAAAGTGATCGTTTTCAGCCTTCCGCCTGGCAGAAATTTATTCAGCAATTAAATACCTGGAACATGGAGGATGTCGATCAATTACGCTGGCCGCTGTGTGCAATCGCCATAGAAGCGCGATATCTTTCATTAAATTGTGCTTCTTTGCTGGCAGAGCGTTTGAACTGGCATTCATTTAATGACAGCGAAGGAATGGATGAGGAAGAAAGGGAGGCTTTTCTTGAGGCCATTCAGGCTGGTGATTGTTTCGATTTCCTTAGCCTTCTGGAATATCCCATTGCGTTGCAGAACCAGACTGTTGAGTATTACTTCGCGCTGGAACGTTGCTGCCGTTACCATCCTGACTATGTCACTGCGTTTTTGGCGATGGAAGGTCCGTGGTTAATTCCTGATGATGCAAAGTTACATCGCAAACTGTTGCGCTGGTACAGCTCGGTGCAAACAGGTATGGCGGAACTCATTCCTGTCGCTCAACAGTGGCAAACGGAAGAACCAGAAAGCGAAGATGCCCGGTATTACTTGTGTGCACAACGTTTGTACTGCGGCGAGGGGGAAAGCCTGCTTGCCGATCTCTGCGCGTACTGGGAAAGTTACCCATCTACACAAGCTGATAATTTGTTGTTGCAGTGGAGCAAGCGTCATTGCCCGGATTATTTCGCGTTATTAGTGATGGTTATCGAAGCGCGGAGCATGGTAGATGCGCAAGGTCAACCGCTGAAATATGTTCCTGGTGAGAGCGCCCGGACGCGGCTGTTATGGGCGGAGATTTTACATAGCGGAAAATTATCGCCGTTAGGTCAATCGTTTATTGAGTCGTTATTCTTCAAGCGCAAAGCATGGGCGTGGTGGAAATCGAGAGTCGGTAGCGAGACAGAGCAAGATTCACCGTTCCTGGATTTGTATCGGGTAGCGGAACAGGTAGTACTTGAAGCGTTTCCGAAACAAGAGATGCTGGCCCGTCTTAATACAAGGCTGGAAGGCGGAGATGCTCATCCATTAGAGGCCATTGTCACCCGGATGCTTTTGACGAAAGTGAAACTCGAGCCGGAGGATGAAGATGTCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGA", + "dna_sequence_length": 1452, + "functions": [ + "J domain-containing HscC co-chaperone", + "Hsc56" + ], + "id": "CDS_646", + "location": [ + [ + "NC_000913", + 680212, + "+", + 1452 + ] + ], + "md5": "61a62e1a3879c8c674bd801e5b86d7b2", + "parent_gene": "", + "protein_md5": "a2ebcb0622bfd0f9178060d282d26751", + "protein_translation": "MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPIALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWLIPDDAKLHRKLLRWYSSVQTGMAELIPVAQQWQTEEPESEDARYYLCAQRLYCGEGESLLADLCAYWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPFLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAIVTRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAMLFS", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002225" + ], + [ + "gene_synonym", + "ECK0643" + ], + [ + "gene_synonym", + "EcoGene:EG13653" + ], + [ + "gene_synonym", + "GI:16128633" + ], + [ + "gene_synonym", + "GeneID:945218" + ], + [ + "gene_synonym", + "JW0645" + ], + [ + "gene_synonym", + "NP_415183.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77319" + ], + [ + "gene_synonym", + "b0650" + ], + [ + "gene_synonym", + "hscC" + ], + [ + "gene_synonym", + "ybeW" + ] + ], + "dna_sequence": "ATGGATAATGCAGAACTCGCCATTGGTATCGATCTCGGTACTACCAATAGTTTAATTGCCGTCTGGAAAGACGGTGCCGCGCAATTAATTCCAAATAAGTTCGGTGAATATTTAACACCATCCATAATTAGCATGGATGAAAATAATCATATTTTAGTCGGAAAACCGGCTGTATCACGGCGTACTTCGCATCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGTATTACGCTCATTAAAAGAAGATGCCGAAGAATTTCTGCAACGTCCGATTAAAGATGTGGTGATCTCCGTTCCGGCTTATTTCAGCGATGAACAACGCAAGCATACCCGTTTAGCAGCGGAGTTAGCCGGGTTAAATGCGGTACGCTTAATTAATGAACCCACAGCAGCTGCGATGGCGTATGGCCTGCATACCCAACAAAATACCCGTTCGCTGGTGTTTGATCTCGGTGGCGGCACGTTTGACGTTACGGTGCTTGAGTACGCCACGCCGGTGATTGAAGTTCACGCCTCCGCTGGCGACAACTTTCTTGGTGGCGAAGATTTTACCCATATGCTGGTCGATGAGGTTTTAAAACGCGCGGATGTCGCCAGGACCACGCTTAACGAGAGTGAACTGGCAGCCTTGTACGCCTGTGTGGAAGCGGCAAAATGTAGCAATCAATCGCCATTGCACATTCGCTGGCAGTATCAGGAAGAAACGCGGGAATGCGAATTTTACGAGAACGAACTGGAAGATTTGTGGTTGCCGCTGCTCAATCGCTTGCGAGTGCCGATTGAACAGGCGTTGCGCGATGCGCGTCTGAAGCCGAGTCAAATCGACAGTCTGGTGCTGGTTGGCGGCGCGTCACAAATGCCGCTGGTGCAGCGAATCGCCGTGCGTCTGTTTGGCAAATTACCGTATCAAAGTTACGATCCGAGCACCATTGTCGCGCTGGGCGCAGCAATCCAGGCCGCCTGCCGCTTACGCAGTGAAGATATTGAAGAGGTAATCCTCACTGATATTTGCCCTTACTCGTTGGGCGTTGAAGTTAACCGCCAGGGCGTTTCCGGCATTTTCTCGCCGATTATTGAACGAAACACCACTGTGCCCGTGTCGCGTGTAGAAACTTATTCAACCATGCACCCGGAACAGGATTCAATTACGGTTAACGTCTATCAGGGAGAAAACCACAAAGTTAAAAACAACATTCTGGTGGAATCCTTCGATGTGCCGTTGAAGAAAACCGGGGCTTATCAGTCGATTGATATTCGCTTTAGTTATGATATCAACGGGTTGCTTGAAGTTGACGTGCTTCTGGAAGACGGCAGCGTTAAGTCCAGAGTGATTAACCACAGCCCGGTAACATTGAGCGCGCAGCAGATTGAAGAGAGTCGGACGCGGTTATCCGCATTGAAAATTTATCCGCGCGATATGCTCATCAATCGCACCTTTAAAGCCAAACTGGAAGAGTTGTGGGCGCGGGCGCTGGGTGACGAGCGAGAAGAGATCGGCCGGGTGATCACCGATTTTGATGCGGCGTTGCAGTCAAACGATATGGCCCGCGTGGATGAAGTTCGGCGGCGGGCGAGCGATTATTTAGCCATTGAGATCCCATAA", + "dna_sequence_length": 1671, + "functions": [ + "Hsp70 family chaperone Hsc62", + "RpoD-binding transcription inhibitor" + ], + "id": "CDS_647", + "location": [ + [ + "NC_000913", + 683393, + "-", + 1671 + ] + ], + "md5": "3fdbf587c991c3e2bd6ef83271f9d245", + "parent_gene": "", + "protein_md5": "3ea0a65116f5f8eb4a5647ba84013bdc", + "protein_translation": "MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSLKEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRADVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLLNRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRVETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGLLEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP", + "protein_translation_length": 556, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002227" + ], + [ + "gene_synonym", + "ECK0644" + ], + [ + "gene_synonym", + "EcoGene:EG12701" + ], + [ + "gene_synonym", + "GI:16128634" + ], + [ + "gene_synonym", + "GeneID:945503" + ], + [ + "gene_synonym", + "JW0646" + ], + [ + "gene_synonym", + "NP_415184.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41409" + ], + [ + "gene_synonym", + "b0651" + ], + [ + "gene_synonym", + "rihA" + ], + [ + "gene_synonym", + "ybeK" + ] + ], + "dna_sequence": "ATGGCACTGCCAATTCTGTTAGATTGCGACCCAGGTCATGACGACGCTATCGCAATAGTTCTCGCCCTCGCCTCACCAGAGCTTGATGTCAAAGCAATTACGTCTTCCGCCGGAAACCAGACACCAGAAAAAACCTTACGCAATGTTCTGCGTATGCTGACCTTGCTTAATCGCACCGATATTCCGGTAGCAGGCGGCGCGGTAAAACCGTTAATGCGTGAGTTGATTATCGCGGACAATGTGCACGGCGAAAGCGGTCTCGACGGCCCGGCATTACCGGAACCGACATTCGCACCGCAAAACTGTACGGCGGTAGAGCTGATGGCGAAAACGCTGCGTGAAAGTGCGGAACCTGTCACCATTGTGTCTACCGGACCGCAAACTAACGTTGCCTTGCTGCTCAATAGCCATCCGGAACTGCATAGCAAAATTGCCCGTATCGTGATTATGGGTGGCGCTATGGGGCTGGGTAACTGGACGCCTGCGGCTGAATTTAATATTTACGTTGACCCGGAAGCGGCAGAAATTGTCTTCCAGTCAGGGATCCCGGTGGTGATGGCCGGTCTGGATGTTACTCATAAAGCACAAATCCACGTTGAAGACACCGAGCGTTTCCGCGCGATTGGTAACCCTGTTTCAACCATTGTTGCCGAACTGCTGGATTTCTTCCTCGAATATCATAAAGACGAAAAATGGGGCTTTGTCGGCGCACCACTGCATGACCCATGCACCATCGCCTGGCTGTTGAAACCGGAGTTATTTACCTCTGTTGAGCGCTGGGTTGGCGTGGAAACACAGGGGAAATATACCCAGGGTATGACGGTTGTTGATTATTATTATCTGACAGGCAATAAACCGAATGCCACCGTAATGGTCGATGTTGATCGTCAGGGCTTTGTTGATTTACTGGCTGATCGTCTGAAATTTTACGCTTAA", + "dna_sequence_length": 936, + "functions": [ + "ribonucleoside hydrolase 1" + ], + "id": "CDS_648", + "location": [ + [ + "NC_000913", + 684412, + "-", + 936 + ] + ], + "md5": "d96ee9e9cf2ba5fbe54ab75501f25c20", + "parent_gene": "", + "protein_md5": "bca159193309a168039dcaf318718843", + "protein_translation": "MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002232" + ], + [ + "gene_synonym", + "ECK0645" + ], + [ + "gene_synonym", + "EcoGene:EG12663" + ], + [ + "gene_synonym", + "GI:16128635" + ], + [ + "gene_synonym", + "GeneID:945254" + ], + [ + "gene_synonym", + "JW0647" + ], + [ + "gene_synonym", + "NP_415185.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG3" + ], + [ + "gene_synonym", + "b0652" + ], + [ + "gene_synonym", + "gltL" + ] + ], + "dna_sequence": "ATGATTACCCTGAAAAATGTTTCAAAATGGTATGGTCACTTTCAGGTGCTGACCGACTGCTCAACCGAAGTGAAAAAAGGCGAAGTGGTGGTGGTTTGCGGCCCGTCTGGTTCCGGCAAATCAACGCTGATTAAAACCGTCAACGGCCTCGAACCGGTGCAGCAAGGTGAAATCACCGTCGATGGTATCGTGGTTAACGACAAGAAAACCGATCTGGCAAAGCTGCGTTCCCGCGTCGGGATGGTATTCCAGCATTTCGAGCTGTTCCCTCATCTGTCGATTATCGAAAACCTGACCCTGGCGCAGGTGAAAGTGCTTAAACGCGATAAAGCGCCGGCTCGTGAAAAAGCCCTGAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGTGTATGGATCCTATTGCGATGCTGTTTGACGAACCGACATCGGCGCTGGATCCGGAGATGATCAACGAAGTACTGGACGTGATGGTGGAACTGGCGAACGAAGGAATGACCATGATGGTGGTGACCCACGAAATGGGCTTTGCCCGTAAAGTGGCGAATCGGGTGATCTTTATGGACGAGGGTAAAATTGTCGAAGACTCGCCGAAAGACGCTTTCTTCGATGATCCGAAATCGGACCGCGCAAAAGACTTCCTCGCGAAAATCCTGCATTAA", + "dna_sequence_length": 726, + "functions": [ + "glutamate/aspartate ABC transporter ATPase" + ], + "id": "CDS_649", + "location": [ + [ + "NC_000913", + 685255, + "-", + 726 + ] + ], + "md5": "57190cbdfc84107336444b3f50a28ed9", + "parent_gene": "", + "protein_md5": "38cdb0dacca0e9d5add18020d599e6ed", + "protein_translation": "MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKILH", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002234" + ], + [ + "gene_synonym", + "ECK0646" + ], + [ + "gene_synonym", + "EcoGene:EG12662" + ], + [ + "gene_synonym", + "GI:16128636" + ], + [ + "gene_synonym", + "GeneID:947354" + ], + [ + "gene_synonym", + "JW0648" + ], + [ + "gene_synonym", + "NP_415186.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER5" + ], + [ + "gene_synonym", + "b0653" + ], + [ + "gene_synonym", + "gltK" + ] + ], + "dna_sequence": "ATGTACGAGTTTGACTGGAGTTCCATTGTCCCTTCCCTGCCATATCTGCTCGACGGGCTGGTGATCACCCTGAAAATCACCGTCACGGCGGTAGTGATTGGTATTTTGTGGGGCACGATGCTGGCGGTGATGCGTTTATCCAGCTTTGCGCCCGTGGCGTGGTTTGCCAAAGCCTACGTTAACGTATTCCGCTCGATTCCTTTAGTTATGGTTTTGCTGTGGTTTTACCTGATCGTGCCGGGTTTTCTGCAAAACGTGCTGGGATTATCGCCAAAAAATGATATCCGTTTAATTTCGGCGATGGTGGCGTTTTCGATGTTTGAAGCGGCCTACTATTCAGAGATTATCCGTGCTGGTATTCAAAGTATTTCTCGTGGTCAATCGAGCGCCGCGCTGGCGTTGGGAATGACTCACTGGCAGTCGATGAAACTGATTATTCTGCCGCAGGCGTTCCGCGCGATGGTGCCGCTGCTGCTCACTCAGGGCATCGTACTGTTCCAGGATACCTCACTGGTGTATGTGTTATCCCTGGCCGATTTCTTCCGTACCGCCTCAACCATTGGTGAGCGTGATGGTACGCAGGTTGAGATGATCCTGTTTGCCGGATTTGTTTATTTCGTTATTAGTCTTAGCGCGTCGTTGTTGGTCAGCTACTTGAAAAGAAGGACAGCATAA", + "dna_sequence_length": 675, + "functions": [ + "glutamate/aspartate ABC transporter permease" + ], + "id": "CDS_650", + "location": [ + [ + "NC_000913", + 685929, + "-", + 675 + ] + ], + "md5": "579ef05c809414fc8eb5756aa60fd41b", + "parent_gene": "", + "protein_md5": "4eff4b7ee0ad58011f2270ddd618bc6a", + "protein_translation": "MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002239" + ], + [ + "gene_synonym", + "ECK0647" + ], + [ + "gene_synonym", + "EcoGene:EG12661" + ], + [ + "gene_synonym", + "GI:16128637" + ], + [ + "gene_synonym", + "GeneID:945443" + ], + [ + "gene_synonym", + "JW0649" + ], + [ + "gene_synonym", + "NP_415187.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER3" + ], + [ + "gene_synonym", + "b0654" + ], + [ + "gene_synonym", + "gltJ" + ] + ], + "dna_sequence": "ATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGAGTGGTTTTCAGGTGACGATCGCTTTGTCGATCTGCGCCTGGATTATCGCTTTCCTCGTCGGTTCATTTTTCGGCATTTTACGTACCGTTCCAAACCGTTTTCTCTCTGGTCTGGGTACGTTGTATGTCGAACTGTTCCGCAACGTGCCGTTGATTGTGCAATTCTTTACCTGGTATCTGGTGATCCCGGAGCTGCTGCCGGAGAAAATCGGCATGTGGTTTAAGGCCGAGCTGGATCCCAATATTCAGTTTTTCCTTTCATCCATGCTCTGCCTGGGGCTGTTTACCGCCGCCCGTGTTTGCGAACAGGTACGCGCCGCGATTCAGTCGCTGCCGCGAGGGCAAAAAAATGCCGCGCTGGCGATGGGCCTGACGCTACCGCAGGCTTATCGATACGTACTGCTGCCTAATGCTTATCGCGTTATCGTCCCGCCGATGACCTCAGAGATGATGAACCTGGTGAAAAACTCCGCCATCGCCTCGACTATCGGTCTGGTGGATATGGCGGCGCAGGCGGGTAAATTGCTCGATTACTCAGCCCATGCCTGGGAGTCGTTTACCGCCATTACGCTGGCGTATGTGTTGATTAACGCTTTTATCATGCTGGTGATGACGCTGGTTGAACGTAAAGTTCGCCTGCCTGGCAACATGGGGGGCAAATAA", + "dna_sequence_length": 741, + "functions": [ + "glutamate/aspartate ABC transporter permease" + ], + "id": "CDS_651", + "location": [ + [ + "NC_000913", + 686669, + "-", + 741 + ] + ], + "md5": "036a890280cc1e10e69343518476d420", + "parent_gene": "", + "protein_md5": "bc349f7f8df2734ffd8537ed0b956f81", + "protein_translation": "MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLPGNMGGK", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002241" + ], + [ + "gene_synonym", + "ECK0648" + ], + [ + "gene_synonym", + "EcoGene:EG12700" + ], + [ + "gene_synonym", + "GI:16128638" + ], + [ + "gene_synonym", + "GeneID:946938" + ], + [ + "gene_synonym", + "JW5092" + ], + [ + "gene_synonym", + "NP_415188.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37902" + ], + [ + "gene_synonym", + "b0655" + ], + [ + "gene_synonym", + "gltI" + ], + [ + "gene_synonym", + "ybeJ" + ], + [ + "gene_synonym", + "yzzK" + ] + ], + "dna_sequence": "ATGCAATTACGTAAACCTGCCACAGCAATCCTCGCCCTGGCGCTTTCCGCAGGACTGGCACAGGCAGATGACGCCGCCCCGGCAGCGGGCAGTACTCTGGACAAAATCGCCAAAAACGGTGTGATTGTCGTCGGTCACCGTGAATCTTCAGTGCCTTTCTCTTATTACGACAATCAGCAAAAAGTGGTGGGTTACTCGCAGGATTACTCCAACGCCATTGTTGAAGCAGTGAAAAAGAAACTCAACAAACCGGACTTGCAGGTAAAACTGATTCCGATTACCTCACAAAACCGTATTCCACTGCTGCAAAACGGCACTTTCGATTTTGAATGTGGTTCTACCACCAACAACGTCGAACGCCAAAAACAGGCGGCTTTCTCTGACACTATTTTCGTGGTCGGTACGCGCCTGTTGACCAAAAAGGGTGGCGATATCAAAGATTTTGCCAACCTGAAAGACAAAGCCGTAGTCGTCACTTCCGGCACTACCTCTGAAGTTTTGCTCAACAAACTGAATGAAGAGCAAAAAATGAATATGCGCATCATCAGCGCCAAAGATCACGGTGACTCTTTCCGCACCCTGGAAAGCGGTCGTGCCGTTGCCTTTATGATGGATGACGCTCTGCTGGCCGGTGAACGTGCGAAAGCGAAGAAACCAGACAACTGGGAAATCGTCGGCAAGCCGCAGTCTCAGGAGGCCTACGGTTGTATGTTGCGTAAAGATGATCCGCAGTTCAAAAAGCTGATGGATGACACCATCGCTCAGGTGCAGACCTCCGGTGAAGCGGAAAAATGGTTTGATAAGTGGTTCAAAAATCCAATTCCGCCGAAAAACCTGAACATGAATTTCGAACTGTCAGACGAAATGAAAGCACTGTTCAAAGAACCGAATGACAAGGCACTGAACTAA", + "dna_sequence_length": 909, + "functions": [ + "glutamate/aspartate periplasmic binding protein" + ], + "id": "CDS_652", + "location": [ + [ + "NC_000913", + 687747, + "-", + 909 + ] + ], + "md5": "523aaca0bf99e237e1e1657a832c1614", + "parent_gene": "", + "protein_md5": "96a76a6b7f10633ef525f2784214ee48", + "protein_translation": "MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKALN", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002246" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16128639" + ], + [ + "gene_synonym", + "GeneID:944917" + ], + [ + "gene_synonym", + "NP_415189.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE51" + ], + [ + "gene_synonym", + "b0656" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_653", + "location": [ + [ + "NC_000913", + 689013, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002250" + ], + [ + "gene_synonym", + "ECK0649" + ], + [ + "gene_synonym", + "EcoGene:EG10168" + ], + [ + "gene_synonym", + "GI:16128640" + ], + [ + "gene_synonym", + "GeneID:946201" + ], + [ + "gene_synonym", + "JW0654" + ], + [ + "gene_synonym", + "NP_415190.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23930" + ], + [ + "gene_synonym", + "b0657" + ], + [ + "gene_synonym", + "cutE" + ], + [ + "gene_synonym", + "lnt" + ] + ], + "dna_sequence": "ATGGCTTTTGCCTCATTAATTGAACGCCAGCGCATTCGCCTGCTGCTGGCGTTATTATTCGGTGCCTGCGGAACGCTGGCCTTCTCTCCTTACGACGTCTGGCCTGCGGCGATTATTTCGCTGATGGGGCTTCAGGCGTTGACCTTTAACCGCCGTCCACTCCAGTCTGCCGCTATTGGCTTTTGCTGGGGATTTGGCCTCTTTGGCAGCGGTATTAACTGGGTCTATGTCAGCATCGCGACCTTTGGCGGAATGCCTGGCCCGGTTAACATCTTCCTGGTGGTGCTGCTGGCGGCGTATTTGTCGCTGTATACCGGACTGTTTGCTGGCGTGCTGTCGCGTCTGTGGCCGAAAACCACCTGGCTGCGCGTAGCGATTGCCGCCCCTGCCCTCTGGCAAGTGACCGAGTTTCTGCGCGGTTGGGTACTGACCGGCTTCCCGTGGTTACAGTTCGGCTATAGCCAGATTGATGGCCCGTTAAAAGGGCTGGCACCGATAATGGGCGTGGAAGCCATTAACTTCCTGCTGATGATGGTTAGTGGCCTGCTGGCACTGGCGTTGGTCAAACGCAACTGGCGTCCGCTGGTGGTGGCCGTCGTGCTGTTTGCCCTTCCCTTCCCGCTGCGTTACATCCAGTGGTTTACCCCACAACCGGAGAAAACCATTCAGGTTTCGATGGTTCAGGGCGATATTCCGCAATCGCTGAAATGGGACGAAGGCCAGCTTCTTAATACGCTGAAGATTTACTACAACGCAACGGCACCGCTGATGGGCAAATCATCGTTGATTATCTGGCCGGAGTCGGCGATAACCGATCTGGAAATTAATCAGCAACCGTTCCTCAAAGCACTGGACGGTGAGTTGCGTGATAAAGGTAGCTCGCTGGTAACCGGGATTGTCGACGCGCGTCTCAATAAGCAGAACCGCTACGATACCTACAACACCATCATCACGCTGGGTAAAGGTGCGCCGTACAGCTACGAATCAGCCGATCGCTATAACAAAAACCATCTGGTGCCGTTTGGCGAGTTTGTCCCGCTGGAGTCGATTCTGCGTCCGTTAGCACCGTTCTTTGATCTGCCGATGTCGTCGTTCAGCCGTGGGCCATATATCCAGCCGCCGCTGTCGGCAAATGGTATTGAGCTTACTGCGGCTATTTGCTACGAGATCATTCTCGGCGAGCAAGTGCGCGATAACTTCCGCCCGGATACCGACTATCTGCTGACTATCTCCAACGATGCGTGGTTTGGTAAATCTATTGGTCCATGGCAACACTTCCAGATGGCGCGAATGCGTGCGCTGGAGCTGGCGCGCCCACTGTTGCGCAGCACCAACAACGGCATTACGGCGGTGATTGGCCCGCAGGGTGAGATTCAGGCGATGATCCCGCAGTTCACCCGCGAGGTGTTAACCACTAACGTGACGCCGACCACCGGACTCACACCATACGCACGTACCGGCAACTGGCCGCTGTGGGTGCTGACGGCATTGTTTGGTTTTGCTGCTGTGTTGATGAGTCTGCGTCAGCGACGTAAATAA", + "dna_sequence_length": 1539, + "functions": [ + "apolipoprotein N-acyltransferase" + ], + "id": "CDS_654", + "location": [ + [ + "NC_000913", + 690881, + "-", + 1539 + ] + ], + "md5": "5f3366ca8adba3c37d12ff66b055d22c", + "parent_gene": "", + "protein_md5": "0b6ffb4b5e917e71815fd78b961f8398", + "protein_translation": "MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLRQRRK", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002252" + ], + [ + "gene_synonym", + "ECK0650" + ], + [ + "gene_synonym", + "EcoGene:EG13654" + ], + [ + "gene_synonym", + "GI:16128641" + ], + [ + "gene_synonym", + "GeneID:946417" + ], + [ + "gene_synonym", + "JW0655" + ], + [ + "gene_synonym", + "NP_415191.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE78" + ], + [ + "gene_synonym", + "b0658" + ], + [ + "gene_synonym", + "corC" + ], + [ + "gene_synonym", + "ybeX" + ] + ], + "dna_sequence": "ATGAGCGACGACAATTCACACAGTAGTGACACGATAAGCAACAAGAAGGGATTTTTCTCCCTGTTACTCAGCCAACTTTTCCACGGTGAACCGAAAAACCGTGACGAACTGCTGGCGCTGATCCGTGATTCCGGGCAGAACGACCTTATCGACGAAGATACGCGCGATATGCTCGAAGGGGTGATGGACATCGCAGACCAACGCGTTCGCGACATCATGATCCCCCGCTCCCAGATGATTACCCTGAAACGCAACCAGACGCTGGACGAATGTCTTGATGTCATCATCGAGTCCGCCCACTCACGTTTCCCGGTGATTAGCGAAGACAAAGATCACATTGAAGGGATTCTGATGGCGAAAGACTTGCTGCCGTTTATGCGCAGCGATGCTGAAGCCTTCAGCATGGACAAAGTGTTACGTCAGGCGGTTGTCGTTCCTGAAAGTAAGCGCGTAGACCGGATGCTGAAAGAGTTTCGCTCTCAGCGTTACCACATGGCGATCGTTATTGACGAATTCGGTGGGGTTTCCGGTCTGGTGACCATTGAAGACATCCTGGAACTGATTGTTGGTGAGATTGAAGACGAGTATGACGAAGAAGATGATATCGACTTCCGTCAGCTGAGTCGTCATACCTGGACCGTACGCGCACTGGCTTCCATTGAAGACTTCAACGAAGCGTTCGGCACCCACTTTAGCGATGAAGAAGTCGACACTATCGGTGGTCTGGTGATGCAGGCATTTGGGCATCTTCCGGCGCGTGGCGAAACTATCGACATCGACGGTTACCAGTTCAAAGTGGCGATGGCCGACAGTCGGCGTATTATTCAGGTTCATGTCAAAATCCCGGATGACTCACCCCAGCCGAAGCTGGATGAATAA", + "dna_sequence_length": 879, + "functions": [ + "putative ion transport" + ], + "id": "CDS_655", + "location": [ + [ + "NC_000913", + 691784, + "-", + 879 + ] + ], + "md5": "51d2438671a4285a23d7725fcbe34fa9", + "parent_gene": "", + "protein_md5": "1bc1abec4cdd9bfda2cc56666581251f", + "protein_translation": "MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002255" + ], + [ + "gene_synonym", + "ECK0651" + ], + [ + "gene_synonym", + "EcoGene:EG13655" + ], + [ + "gene_synonym", + "GI:16128642" + ], + [ + "gene_synonym", + "GeneID:946430" + ], + [ + "gene_synonym", + "JW0656" + ], + [ + "gene_synonym", + "NP_415192.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A898" + ], + [ + "gene_synonym", + "b0659" + ], + [ + "gene_synonym", + "ybeY" + ] + ], + "dna_sequence": "ATGAGTCAGGTGATCCTCGATTTACAACTGGCATGTGAAGATAATTCCGGGTTACCGGAAGAGAGCCAGTTTCAGACATGGCTGAATGCGGTGATCCCGCAGTTTCAGGAAGAATCGGAAGTGACGATTCGCGTGGTCGATACCGCCGAAAGCCACAGTCTGAATCTGACCTATCGCGGTAAGGATAAGCCGACCAACGTGCTCTCCTTCCCGTTTGAAGTGCCGCCTGGCATGGAAATGTCGCTACTGGGCGATCTGGTTATCTGCCGTCAGGTGGTTGAGAAGGAAGCTCAGGAGCAAGGCAAACCACTGGAGGCGCACTGGGCGCATATGGTGGTGCACGGCAGTCTGCATTTGTTAGGTTACGATCACATCGAAGATGACGAAGCAGAAGAAATGGAAGCCCTCGAAACAGAGATTATGCTTGCTCTGGGCTATGAGGATCCGTACATTGCCGAGAAAGAATAA", + "dna_sequence_length": 468, + "functions": [ + "ssRNA-specific endoribonuclease", + "16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R", + "rRNA transcription antitermination factor" + ], + "id": "CDS_656", + "location": [ + [ + "NC_000913", + 692341, + "-", + 468 + ] + ], + "md5": "b8a24e753d359845b6d4ea2d6580bab6", + "parent_gene": "", + "protein_md5": "83b737ffb679080aa9c0d56ed58ff728", + "protein_translation": "MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002257" + ], + [ + "gene_synonym", + "ECK0652" + ], + [ + "gene_synonym", + "EcoGene:EG13656" + ], + [ + "gene_synonym", + "GI:145698230" + ], + [ + "gene_synonym", + "GeneID:948044" + ], + [ + "gene_synonym", + "JW0657" + ], + [ + "gene_synonym", + "NP_415193.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K3" + ], + [ + "gene_synonym", + "b0660" + ], + [ + "gene_synonym", + "phoL" + ], + [ + "gene_synonym", + "ybeZ" + ] + ], + "dna_sequence": "TTGAACATAGACACTCGCGAAATCACCCTGGAGCCAGCAGACAATGCGCGTCTGTTGAGCCTGTGCGGCCCGTTTGATGACAACATCAAGCAGCTCGAACGCCGTCTCGGCATCGAGATCAATCGCCGCGATAACCACTTTAAACTGACCGGCCGTCCGATTTGCGTCACCGCTGCGGCAGACATTCTGCGTAGCCTGTATGTCGATACTGCCCCGATGCGCGGTCAGATTCAGGATATCGAACCGGAACAGATCCACCTTGCGATTAAAGAAGCGCGGGTACTGGAGCAAAGCGCGGAGAGCGTGCCGGAGTACGGCAAAGCGGTCAATATCAAAACCAAACGCGGCGTAATTAAGCCGCGCACGCCAAACCAGGCGCAGTACATCGCCAATATTCTCGACCATGACATTACCTTCGGCGTTGGCCCGGCGGGTACGGGTAAAACCTACCTGGCAGTGGCTGCGGCAGTTGATGCCCTGGAGCGTCAGGAAATTCGCCGTATTCTGCTGACTCGTCCGGCAGTAGAAGCCGGTGAGAAACTGGGCTTCCTGCCTGGCGATTTAAGCCAGAAAGTAGACCCGTATCTGCGCCCGCTGTACGACGCGCTGTTTGAAATGCTGGGCTTTGAGAAAGTCGAGAAACTGATTGAGCGCAACGTTATTGAAGTCGCACCGCTGGCCTATATGCGTGGTCGTACGCTGAACGACGCGTTTATCATTCTCGATGAGAGCCAGAACACCACCATCGAACAGATGAAGATGTTCCTGACCCGTATCGGTTTTAACTCAAAAGCGGTTATCACCGGCGACGTCACACAGATCGACCTGCCGCGTAATACTAAATCAGGCTTACGTCACGCCATCGAAGTGCTGGCCGATGTCGAAGAGATCAGCTTTAACTTCTTCCACAGCGAAGACGTGGTTCGTCACCCTGTGGTGGCGCGTATCGTTAACGCCTATGAAGCCTGGGAAGAAGCCGAACAAAAACGAAAAGCGGCGCTGGCAGCAGAACGCAAGCGCGAAGAACAGGAACAAAAATGA", + "dna_sequence_length": 1041, + "functions": [ + "heat shock protein, putative NTPase", + "PhoH-like protein" + ], + "id": "CDS_657", + "location": [ + [ + "NC_000913", + 693378, + "-", + 1041 + ] + ], + "md5": "e06d993e90b08feb4316be540087e27b", + "parent_gene": "", + "protein_md5": "ff9d2182ad09ff345be0f72eb299b944", + "protein_translation": "MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002260" + ], + [ + "gene_synonym", + "ECK0653" + ], + [ + "gene_synonym", + "EcoGene:EG13657" + ], + [ + "gene_synonym", + "GI:16128644" + ], + [ + "gene_synonym", + "GeneID:945260" + ], + [ + "gene_synonym", + "JW0658" + ], + [ + "gene_synonym", + "NP_415194.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEI1" + ], + [ + "gene_synonym", + "b0661" + ], + [ + "gene_synonym", + "miaB" + ], + [ + "gene_synonym", + "yleA" + ] + ], + "dna_sequence": "ATGACCAAAAAACTCCATATTAAAACCTGGGGCTGTCAGATGAACGAGTACGATTCATCGAAGATGGCCGATCTGCTGGATGCCACCCACGGCTATCAACTGACCGACGTGGCGGAAGAAGCGGATGTGCTGCTGCTGAACACCTGCTCAATCCGCGAGAAGGCTCAGGAAAAAGTCTTCCATCAGTTGGGTCGCTGGAAACTGTTAAAAGAGAAGAATCCAGACCTGATTATCGGCGTCGGTGGCTGCGTGGCATCGCAAGAAGGCGAGCACATTCGCCAGCGCGCCCACTATGTCGATATTATTTTTGGGCCGCAAACGCTGCACCGTCTGCCGGAGATGATCAACTCCGTGCGTGGCGACCGCAGCCCGGTTGTAGATATCAGCTTCCCGGAAATCGAGAAGTTTGACCGTCTACCGGAACCGCGCGCCGAAGGGCCGACCGCGTTTGTCTCCATCATGGAAGGCTGCAATAAATATTGCACCTACTGCGTGGTGCCTTACACCCGTGGTGAAGAGGTAAGCCGTCCGTCCGACGATATTCTGTTTGAGATTGCCCAGCTTGCGGCTCAGGGCGTGCGTGAAGTCAACCTGCTCGGTCAGAACGTGAACGCCTGGCGTGGTGAAAACTACGACGGCACCACCGGATCGTTTGCCGATCTGCTGCGTCTGGTTGCTGCGATCGACGGGATCGATCGTATTCGCTTTACCACCAGCCATCCGATCGAATTCACCGACGATATCATCGAAGTGTATCGCGACACGCCGGAGCTGGTGAGCTTCCTGCATCTGCCGGTACAGAGCGGTTCCGATCGCATTCTGAACCTGATGGGCCGTACCCATACGGCGCTGGAGTACAAAGCGATCATCCGTAAACTGCGTGCGGCGCGTCCAGATATTCAGATCAGTTCTGATTTCATCGTTGGCTTCCCTGGCGAAACCACCGAAGACTTCGAGAAAACGATGAAGCTGATTGCCGACGTCAATTTCGACATGAGCTACAGCTTTATCTTCTCTGCACGTCCGGGTACACCAGCCGCCGATATGGTTGATGATGTTCCGGAAGAAGAGAAGAAGCAGCGTCTGTATATTCTGCAAGAGCGCATTAATCAGCAAGCGATGGCGTGGAGCCGCCGGATGCTCGGCACCACCCAGCGTATTCTGGTAGAAGGTACATCGCGTAAGAGCATCATGGAGCTTTCCGGGCGTACGGAAAATAACCGCGTGGTCAACTTCGAAGGCACGCCGGATATGATCGGTAAATTCGTCGATGTAGAAATTACCGACGTCTACCCGAACTCTCTGCGCGGTAAAGTGGTGCGTACTGAAGATGAAATGGGTCTGCGCGTGGCAGAAACACCGGAATCAGTGATTGCCCGTACCCGCAAAGAAAACGACCTTGGCGTGGGTTATTATCAGCCGTAA", + "dna_sequence_length": 1425, + "functions": [ + "tRNA-i(6)A37 methylthiotransferase" + ], + "id": "CDS_658", + "location": [ + [ + "NC_000913", + 694955, + "-", + 1425 + ] + ], + "md5": "0d8a7bf9ddecfd7c2ceb6ba97f3999d6", + "parent_gene": "", + "protein_md5": "f35ceae8be8a2b1d298ba3a79f389400", + "protein_translation": "MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002265" + ], + [ + "gene_synonym", + "ECK0654" + ], + [ + "gene_synonym", + "EcoGene:EG13658" + ], + [ + "gene_synonym", + "GI:16128645" + ], + [ + "gene_synonym", + "GeneID:945261" + ], + [ + "gene_synonym", + "JW0659" + ], + [ + "gene_synonym", + "NP_415195.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75728" + ], + [ + "gene_synonym", + "b0662" + ], + [ + "gene_synonym", + "ubiF" + ], + [ + "gene_synonym", + "yleB" + ] + ], + "dna_sequence": "ATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATCTCGGCGATCAGCGCGGCTTCGGTATCATTGCTTAAAGGGTTAGGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGGTGTGGTATGACTCTCCGGCGCGTATTCGCCAGTTGCAGAATATGAATATGGCACAGCTCCAGGCGGAAATCGCGAAGCATTTCCCGTCGCGTCTGGGTTACGTTACACCGCTTGCCGCTGGTGCGTTTCCGCTGACGCGTCGCCATGCGTTGCAGTACGTGCAGCCAGGGCTTGCGCTGGTGGGCGATGCCGCGCATACCATCCATCCGCTGGCGGGGCAGGGAGTGAATCTTGGTTATCGTGATGTCGATGCCCTGATTGATGTTCTGGTCAACGCCCGCAGCTACGGCGAAGCGTGGGCCAGTTATCCTGTCCTCAAGCGTTACCAGATGCGGCGCATGGCGGATAACTTCATTATGCAAAGCGGTATGGATCTGTTTTATGCCGGATTCAGCAATAATCTGCCACCACTGCGTTTTATGCGTAATCTCGGGTTAATGGCGGCGGAGCGTGCTGGCGTGTTGAAACGTCAGGCGCTGAAATATGCGTTAGGGTTGTAG", + "dna_sequence_length": 1176, + "functions": [ + "2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase" + ], + "id": "CDS_659", + "location": [ + [ + "NC_000913", + 695101, + "+", + 1176 + ] + ], + "md5": "9c06e9dabc81d859867e7f89b866e32a", + "parent_gene": "", + "protein_md5": "48e6dbcfb9f4e14ada66bf5eba60bce4", + "protein_translation": "MTNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVADSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKLPLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFIMQSGMDLFYAGFSNNLPPLRFMRNLGLMAAERAGVLKRQALKYALGL", + "protein_translation_length": 391, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002292" + ], + [ + "gene_synonym", + "ECK0662" + ], + [ + "gene_synonym", + "EcoGene:EG10092" + ], + [ + "gene_synonym", + "GI:16128650" + ], + [ + "gene_synonym", + "GeneID:945281" + ], + [ + "gene_synonym", + "JW0660" + ], + [ + "gene_synonym", + "NP_415200.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22106" + ], + [ + "gene_synonym", + "asnB" + ], + [ + "gene_synonym", + "b0674" + ] + ], + "dna_sequence": "ATGTGTTCAATTTTTGGCGTATTCGATATCAAAACAGACGCAGTTGAGCTGCGTAAGAAAGCCCTCGAGCTGTCACGCCTGATGCGTCATCGTGGCCCGGACTGGTCCGGTATTTATGCCAGCGATAACGCCATTCTCGCCCACGAACGTCTGTCAATTGTTGACGTTAACGCGGGGGCGCAACCTCTCTACAACCAACAAAAAACCCACGTACTGGCGGTAAACGGTGAAATCTACAACCACCAGGCATTGCGCGCCGAATATGGCGATCGTTACCAGTTCCAGACCGGGTCTGACTGTGAAGTGATCCTCGCGCTGTATCAGGAAAAAGGGCCGGAATTTCTCGACGACTTGCAGGGCATGTTTGCCTTTGCACTGTACGACAGCGAAAAAGATGCCTACCTGATTGGTCGCGACCATCTGGGGATCATCCCACTGTATATGGGGTATGACGAACACGGTCAGCTGTATGTGGCCTCAGAAATGAAAGCGCTGGTGCCAGTTTGCCGCACGATTAAAGAGTTCCCGGCGGGGAGCTATTTGTGGAGCCAGGACGGCGAAATCCGTTCTTACTATCATCGCGACTGGTTCGACTACGATGCGGTGAAAGATAACGTGACCGACAAAAACGAGCTGCGTCAGGCACTGGAAGATTCAGTTAAAAGCCATCTGATGTCTGATGTGCCTTACGGTGTGCTGCTTTCTGGTGGTCTGGATTCCTCAATTATTTCCGCTATCACCAAGAAATACGCAGCCCGTCGCGTGGAAGATCAGGAACGCTCTGAAGCCTGGTGGCCGCAGTTACACTCCTTTGCTGTAGGTCTGCCGGGTTCACCGGATCTGAAAGCAGCCCAGGAAGTGGCAAACCATCTGGGCACGGTGCATCACGAAATTCACTTCACTGTACAGGAAGGTCTGGATGCCATCCGCGACGTGATTTACCACATCGAAACTTATGATGTGACCACTATTCGCGCTTCAACACCGATGTATTTAATGTCGCGTAAGATCAAGGCGATGGGCATTAAAATGGTGCTGTCCGGTGAAGGTTCTGATGAAGTGTTCGGCGGTTATCTTTACTTCCACAAAGCACCGAATGCCAAAGAACTGCATGAAGAGACGGTGCGTAAACTGCTGGCCCTGCATATGTATGACTGCGCGCGTGCCAACAAAGCGATGTCAGCCTGGGGCGTGGAAGCACGCGTTCCGTTCCTCGACAAAAAATTCCTTGATGTGGCGATGCGTATTAACCCACAGGATAAAATGTGCGGTAACGGCAAAATGGAAAAACACATCCTGCGTGAATGTTTTGAAGCGTATCTGCCTGCAAGCGTGGCCTGGCGGCAGAAAGAGCAGTTCTCCGATGGCGTCGGTTACAGTTGGATCGACACCCTGAAAGAAGTGGCTGCGCAGCAGGTTTCTGATCAGCAACTGGAAACTGCCCGCTTCCGCTTCCCGTACAACACGCCAACCTCTAAAGAAGCGTACTTGTATCGGGAGATCTTTGAAGAACTATTCCCGCTTCCGAGCGCCGCTGAGTGCGTGCCGGGCGGTCCTTCCGTCGCTTGTTCTTCCGCTAAAGCGATCGAATGGGATGAAGCGTTCAAGAAAATGGACGATCCGTCTGGTCGCGCGGTTGGTGTTCACCAGTCGGCGTATAAGTAA", + "dna_sequence_length": 1665, + "functions": [ + "asparagine synthetase B" + ], + "id": "CDS_660", + "location": [ + [ + "NC_000913", + 699177, + "-", + 1665 + ] + ], + "md5": "32f8c3d78ed7daab93c655208d6868ab", + "parent_gene": "", + "protein_md5": "671e9a111cf76fc000372e4c0887bf0b", + "protein_translation": "MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFEAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK", + "protein_translation_length": 554, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002296" + ], + [ + "gene_synonym", + "ECK0663" + ], + [ + "gene_synonym", + "EcoGene:EG10634" + ], + [ + "gene_synonym", + "GI:16128651" + ], + [ + "gene_synonym", + "GeneID:945283" + ], + [ + "gene_synonym", + "JW0661" + ], + [ + "gene_synonym", + "NP_415201.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF24" + ], + [ + "gene_synonym", + "b0675" + ], + [ + "gene_synonym", + "nagD" + ], + [ + "gene_synonym", + "umpH" + ] + ], + "dna_sequence": "ATGACCATTAAAAATGTAATTTGCGATATCGACGGCGTGCTGATGCACGATAACGTCGCCGTACCGGGTGCAGCGGAATTTTTGCACGGGATTATGGATAAAGGCCTGCCGCTGGTGTTGCTGACCAACTATCCTTCGCAGACTGGGCAAGATCTGGCGAACCGCTTTGCCACCGCAGGTGTCGATGTACCTGACAGCGTGTTTTATACCTCTGCGATGGCGACTGCCGATTTCCTGCGTCGCCAGGAAGGCAAGAAAGCGTATGTGGTGGGCGAAGGCGCACTGATTCATGAACTGTACAAAGCCGGTTTCACTATTACCGATGTGAACCCTGATTTCGTGATTGTTGGCGAAACGCGTTCCTACAACTGGGACATGATGCATAAAGCAGCCTATTTCGTCGCTAACGGTGCACGTTTTATCGCCACCAATCCGGACACCCACGGGCGCGGTTTTTATCCCGCTTGTGGCGCGTTGTGTGCAGGGATTGAGAAAATCTCCGGGCGCAAACCGTTCTATGTTGGTAAGCCCAGCCCGTGGATCATCCGCGCAGCATTAAACAAAATGCAGGCGCATTCGGAAGAAACGGTGATTGTCGGCGATAACCTGCGTACCGATATTCTGGCCGGCTTCCAGGCAGGTCTGGAGACGATTCTGGTGCTTTCTGGTGTTTCGTCGCTCGACGATATCGACAGTATGCCTTTCCGCCCCAGCTGGATTTACCCGTCAGTCGCTGAAATCGACGTTATCTGA", + "dna_sequence_length": 753, + "functions": [ + "UMP phosphatase" + ], + "id": "CDS_661", + "location": [ + [ + "NC_000913", + 700326, + "-", + 753 + ] + ], + "md5": "8fda9cbb38fb515ade2822b2cb695cad", + "parent_gene": "", + "protein_md5": "1a4dc8343b5f29efbb9a0fd6d8ec0df8", + "protein_translation": "MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002299" + ], + [ + "gene_synonym", + "ECK0664" + ], + [ + "gene_synonym", + "EcoGene:EG10636" + ], + [ + "gene_synonym", + "GI:16128652" + ], + [ + "gene_synonym", + "GeneID:945285" + ], + [ + "gene_synonym", + "JW0662" + ], + [ + "gene_synonym", + "NP_415202.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF20" + ], + [ + "gene_synonym", + "b0676" + ], + [ + "gene_synonym", + "nagC" + ], + [ + "gene_synonym", + "nagR" + ] + ], + "dna_sequence": "ATGACACCAGGCGGACAAGCTCAGATAGGTAATGTTGATCTCGTAAAACAGCTTAACAGCGCGGCGGTTTATCGCCTGATTGACCAGTACGGGCCAATCTCGCGGATTCAGATTGCCGAGCAAAGCCAGCTTGCCCCCGCCAGCGTAACCAAAATTACGCGTCAGCTTATCGAACGCGGGCTGATCAAAGAAGTTGATCAGCAGGCCTCCACCGGGGGCCGCCGCGCTATCTCCATCGTCACCGAAACCCGCAATTTCCACGCAATCGGCGTACGGCTTGGTCGTCATGACGCCACCATCACTCTGTTTGATCTCAGCAGCAAAGTGCTGGCAGAAGAACATTACCCGCTGCCGGAACGTACCCAGCAAACGCTGGAACATGCCCTGTTGAATGCCATTGCTCAGTTTATTGATAGCTACCAGCGCAAACTGCGCGAGCTGATCGCGATTTCGGTGATCCTGCCAGGGCTTGTTGACCCGGACAGCGGCAAAATTCATTACATGCCGCATATTCAGGTAGAAAACTGGGGGCTGGTAGAAGCTCTGGAAGAACGTTTTAAAGTGACCTGTTTCGTTGGTCACGATATCCGTAGTCTGGCGCTGGCGGAGCACTACTTCGGTGCAAGTCAGGATTGCGAAGACTCCATTCTGGTGCGTGTCCATCGCGGAACCGGGGCCGGGATTATCTCTAACGGGCGCATTTTTATTGGCCGCAACGGCAACGTCGGTGAAATTGGCCATATTCAGGTCGAACCGCTGGGTGAACGCTGCCACTGCGGCAACTTTGGCTGCCTGGAAACTATCGCTGCCAACGCTGCCATTGAACAACGGGTGTTGAATCTGTTAAAGCAGGGCTACCAGAGCCGCGTGCCGCTGGACGACTGCACCATCAAAACTATCTGCAAAGCCGCGAACAAAGGCGATAGTCTGGCGTCGGAAGTAATTGAGTATGTCGGTCGTCATCTGGGTAAAACCATCGCCATTGCTATCAACTTATTTAATCCGCAAAAAATTGTTATTGCCGGTGAAATCACCGAAGCCGATAAAGTGCTGCTCCCTGCTATTGAAAGCTGCATTAATACCCAGGCGCTGAAGGCGTTTCGCACTAATCTGCCGGTGGTACGTTCTGAGCTGGATCACCGCTCGGCAATCGGCGCTTTTGCGCTGGTAAAACGCGCCATGCTCAACGGTATTTTGCTCCAGCATTTGCTGGAAAATTAA", + "dna_sequence_length": 1221, + "functions": [ + "N-acetylglucosamine-inducible nag divergent operon transcriptional repressor" + ], + "id": "CDS_662", + "location": [ + [ + "NC_000913", + 701594, + "-", + 1221 + ] + ], + "md5": "6e22460256e0d9f24a83236d91817a67", + "parent_gene": "", + "protein_md5": "958ba29334f789f470d07397b634d739", + "protein_translation": "MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002301" + ], + [ + "gene_synonym", + "ECK0665" + ], + [ + "gene_synonym", + "EcoGene:EG10632" + ], + [ + "gene_synonym", + "GI:16128653" + ], + [ + "gene_synonym", + "GeneID:945289" + ], + [ + "gene_synonym", + "JW0663" + ], + [ + "gene_synonym", + "NP_415203.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF18" + ], + [ + "gene_synonym", + "b0677" + ], + [ + "gene_synonym", + "nagA" + ] + ], + "dna_sequence": "ATGTATGCATTAACCCAGGGCCGGATCTTTACCGGCCACGAATTTCTTGATGACCACGCGGTTGTTATCGCTGATGGCCTGATTAAAAGCGTCTGTCCGGTAGCGGAACTGCCGCCAGAGATCGAACAACGTTCACTGAACGGGGCCATTCTCTCCCCCGGTTTTATCGATGTGCAGTTAAACGGCTGCGGCGGCGTACAGTTTAACGACACCGCTGAAGCGGTCAGCGTGGAAACGCTGGAAATCATGCAGAAAGCCAATGAGAAATCAGGCTGTACTAACTATCTGCCGACGCTTATCACCACCAGCGATGAGCTGATGAAACAGGGCGTGCGCGTTATGCGCGAGTACCTGGCAAAACATCCGAATCAGGCGTTAGGTCTGCATCTGGAAGGTCCGTGGCTGAATCTGGTAAAAAAAGGCACCCATAATCCGAATTTTGTGCGTAAGCCTGATGCCGCGCTGGTCGATTTCCTGTGTGAAAACGCCGACGTCATTACCAAAGTGACCCTGGCACCGGAAATGGTTCCTGCGGAAGTCATCAGCAAACTGGCAAATGCCGGGATTGTGGTTTCTGCCGGTCACTCCAACGCGACGTTGAAAGAAGCAAAAGCCGGTTTCCGCGCGGGGATTACCTTTGCCACCCATCTGTACAACGCGATGCCGTATATTACCGGTCGTGAACCTGGCCTGGCGGGCGCGATCCTCGACGAAGCTGACATTTATTGCGGTATTATTGCTGATGGCCTGCATGTTGATTACGCCAACATTCGCAACGCTAAACGTCTGAAAGGCGACAAACTGTGTCTGGTTACTGACGCCACCGCGCCAGCAGGTGCCAACATTGAACAGTTCATTTTTGCGGGTAAAACAATATACTACCGTAACGGACTTTGTGTGGATGAGAACGGTACGTTAAGCGGTTCATCCTTAACCATGATTGAAGGCGTGCGTAATCTGGTCGAACATTGCGGTATCGCACTGGATGAAGTGCTACGTATGGCGACGCTCTATCCGGCGCGTGCGATTGGCGTTGAGAAACGTCTCGGCACACTCGCCGCAGGTAAAGTAGCCAACCTGACTGCATTCACACCTGATTTTAAAATCACCAAGACCATCGTTAACGGTAACGAGGTCGTAACTCAATAA", + "dna_sequence_length": 1149, + "functions": [ + "N-acetylglucosamine-6-phosphate deacetylase" + ], + "id": "CDS_663", + "location": [ + [ + "NC_000913", + 702751, + "-", + 1149 + ] + ], + "md5": "2e2f027073fe4397d42816b6b072fbfa", + "parent_gene": "", + "protein_md5": "61d1c28a41354674ef9775e61945e833", + "protein_translation": "MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002304" + ], + [ + "gene_synonym", + "ECK0666" + ], + [ + "gene_synonym", + "EcoGene:EG10633" + ], + [ + "gene_synonym", + "GI:16128654" + ], + [ + "gene_synonym", + "GeneID:945290" + ], + [ + "gene_synonym", + "JW0664" + ], + [ + "gene_synonym", + "NP_415204.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A759" + ], + [ + "gene_synonym", + "b0678" + ], + [ + "gene_synonym", + "glmD" + ], + [ + "gene_synonym", + "nagB" + ] + ], + "dna_sequence": "ATGAGACTGATCCCCCTGACTACCGCTGAACAGGTCGGCAAATGGGCTGCTCGCCATATCGTCAATCGTATCAATGCGTTCAAACCGACTGCCGATCGTCCGTTTGTACTGGGCCTGCCGACTGGCGGCACGCCGATGACCACCTATAAAGCGTTAGTCGAAATGCATAAAGCAGGCCAGGTCAGCTTTAAGCACGTTGTCACCTTCAACATGGACGAATATGTCGGTCTGCCGAAAGAGCATCCGGAAAGCTACTACAGCTTTATGCACCGTAATTTCTTCGATCACGTTGATATTCCAGCAGAAAACATCAACCTTCTCAACGGCAACGCCCCGGATATCGACGCCGAGTGCCGCCAGTATGAAGAAAAAATCCGTTCTTACGGAAAAATTCATCTGTTTATGGGCGGTGTAGGTAACGACGGTCATATTGCATTTAACGAACCGGCGTCTTCTCTGGCTTCTCGTACTCGTATCAAAACCCTGACTCATGACACTCGCGTCGCAAACTCTCGTTTCTTTGATAACGATGTTAATCAGGTGCCAAAATATGCCCTGACTGTCGGTGTTGGTACACTGCTGGATGCCGAAGAAGTGATGATTCTGGTGCTGGGTAGCCAGAAAGCACTGGCGCTGCAGGCCGCCGTTGAAGGTTGCGTGAACCATATGTGGACCATCAGCTGTCTGCAACTGCATCCGAAAGCGATCATGGTGTGCGATGAACCTTCCACCATGGAGCTGAAAGTTAAGACTTTAAGATATTTCAATGAATTAGAAGCAGAAAATATCAAAGGTCTGTAA", + "dna_sequence_length": 801, + "functions": [ + "glucosamine-6-phosphate deaminase" + ], + "id": "CDS_664", + "location": [ + [ + "NC_000913", + 703611, + "-", + 801 + ] + ], + "md5": "cb959310b384b0e6a762cd0a34da9db0", + "parent_gene": "", + "protein_md5": "884a1f2ffa4258b2a97a4732ced1b997", + "protein_translation": "MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002312" + ], + [ + "gene_synonym", + "ECK0667" + ], + [ + "gene_synonym", + "EcoGene:EG10635" + ], + [ + "gene_synonym", + "GI:16128655" + ], + [ + "gene_synonym", + "GeneID:945292" + ], + [ + "gene_synonym", + "JW0665" + ], + [ + "gene_synonym", + "NP_415205.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09323" + ], + [ + "gene_synonym", + "b0679" + ], + [ + "gene_synonym", + "nagE" + ], + [ + "gene_synonym", + "pstN" + ], + [ + "gene_synonym", + "ptsN" + ] + ], + "dna_sequence": "ATGAATATTTTAGGTTTTTTCCAGCGACTCGGTAGGGCGTTACAGCTCCCTATCGCGGTGCTGCCGGTGGCGGCACTGTTGCTGCGATTCGGTCAGCCAGATTTACTTAACGTTGCGTTTATTGCCCAGGCGGGCGGTGCGATTTTTGATAACCTCGCATTAATCTTCGCCATCGGTGTGGCATCCAGCTGGTCGAAAGACAGCGCTGGTGCGGCGGCGCTGGCGGGTGCGGTAGGTTACTTTGTGTTAACCAAAGCGATGGTGACCATCAACCCAGAAATTAACATGGGTGTACTGGCGGGTATCATTACCGGTCTGGTTGGTGGCGCAGCCTATAACCGTTGGTCCGATATTAAACTGCCGGACTTCCTGAGCTTCTTCGGCGGCAAACGCTTTGTGCCGATTGCCACCGGATTCTTCTGCCTGGTGCTGGCGGCCATTTTTGGTTACGTCTGGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATCTTTGGTTTCATCAACCGTCTGCTGATCCCAACCGGTCTGCATCAGGTACTGAACACCATCGCCTGGTTCCAGATTGGTGAATTCACCAACGCGGCGGGTACGGTTTTCCACGGTGACATTAACCGCTTCTATGCCGGTGACGGCACCGCGGGGATGTTCATGTCCGGCTTCTTCCCGATCATGATGTTCGGTCTGCCGGGTGCGGCGCTGGCGATGTACTTCGCAGCACCGAAAGAGCGTCGTCCGATGGTTGGCGGTATGCTGCTTTCTGTTGCTGTTACTGCGTTCCTGACCGGTGTGACTGAGCCGCTGGAATTCCTGTTCATGTTCCTTGCTCCGCTGCTGTACCTCCTGCACGCACTGCTGACCGGTATCAGCCTGTTTGTGGCAACGCTGCTGGGTATCCACGCGGGCTTCTCTTTCTCTGCGGGGGCTATCGACTACGCGTTGATGTATAACCTGCCGGCCGCCAGCCAGAACGTCTGGATGCTGCTGGTGATGGGCGTTATCTTCTTCGCTATCTACTTCGTGGTGTTCAGTTTGGTTATCCGCATGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGCCAACAGCAACACTGAAGAAGGTCTGACTCAACTGGCAACCAACTATATTGCTGCGGTTGGCGGCACTGACAACCTGAAAGCGATTGACGCCTGTATCACCCGTCTGCGCCTTACAGTGGCTGACTCTGCCCGCGTTAACGATACGATGTGTAAACGTCTGGGTGCTTCTGGGGTAGTGAAACTGAACAAACAGACTATTCAGGTGATTGTTGGCGCGAAAGCAGAATCCATCGGCGATGCGATGAAGAAAGTCGTTGCCCGTGGTCCGGTAGCCGCTGCGTCAGCTGAAGCAACTCCGGCAACTGCCGCGCCTGTAGCAAAACCGCAGGCTGTACCAAACGCGGTATCTATCGCGGAGCTGGTATCGCCGATTACCGGTGATGTCGTGGCACTGGATCAGGTTCCTGACGAAGCATTCGCCAGCAAAGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAA", + "dna_sequence_length": 1947, + "functions": [ + "N-acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components" + ], + "id": "CDS_665", + "location": [ + [ + "NC_000913", + 703944, + "+", + 1947 + ] + ], + "md5": "9d49fc5448c3d75cb14e17f1df165453", + "parent_gene": "", + "protein_md5": "54623b2fb945ee9c9df25af901851c5b", + "protein_translation": "MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK", + "protein_translation_length": 648, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002317" + ], + [ + "gene_synonym", + "ECK0668" + ], + [ + "gene_synonym", + "EcoGene:EG10390" + ], + [ + "gene_synonym", + "GI:16128656" + ], + [ + "gene_synonym", + "GeneID:945310" + ], + [ + "gene_synonym", + "JW0666" + ], + [ + "gene_synonym", + "NP_415206.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00962" + ], + [ + "gene_synonym", + "b0680" + ], + [ + "gene_synonym", + "glnS" + ] + ], + "dna_sequence": "ATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCATGCGAAATCTATCTGCCTGAACTTCGGGATCGCCCAGGACTATAAAGGCCAGTGCAACCTGCGTTTCGACGACACTAACCCGGTAAAAGAAGATATCGAGTATGTTGAGTCGATCAAAAACGACGTAGAGTGGTTAGGTTTTCACTGGTCTGGTAACGTCCGTTACTCCTCCGATTATTTTGATCAGCTCCACGCCTATGCGATCGAACTGATCAATAAAGGCCTGGCGTACGTTGATGAACTGACGCCGGAACAGATCCGCGAATACCGCGGCACCCTGACGCAACCGGGTAAAAACAGCCCGTACCGCGACCGCAGCGTTGAAGAGAACCTGGCGCTGTTCGAAAAAATGCGTGCCGGTGGTTTTGAAGAAGGTAAAGCCTGCCTGCGTGCGAAAATCGACATGGCTTCACCGTTTATCGTGATGCGCGATCCGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAACCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAGGCTGGGATGACCCGCGTATGCCGACCATTTCCGGTCTGCGTCGTCGTGGTTACACTGCGGCTTCTATTCGTGAGTTCTGCAAACGCATCGGCGTGACCAAGCAGGACAACACCATTGAGATGGCGTCGCTGGAATCCTGCATCCGTGAAGATCTCAACGAAAATGCGCCGCGCGCAATGGCGGTTATCGATCCGGTGAAACTGGTTATCGAAAACTATCAGGGCGAAGGCGAAATGGTTACCATGCCGAACCATCCGAACAAACCGGAAATGGGCAGCCGTCAGGTGCCGTTTAGCGGTGAGATTTGGATTGATCGCGCCGATTTCCGCGAAGAAGCTAACAAGCAGTACAAACGTCTGGTGCTGGGTAAAGAAGTGCGTCTGCGTAATGCTTATGTGATTAAGGCAGAACGCGTCGAGAAAGATGCCGAAGGTAATATCACCACCATCTTCTGTACTTATGACGCCGATACCTTAAGCAAAGATCCGGCAGATGGTCGTAAAGTCAAAGGTGTTATTCACTGGGTGAGCGCGGCACATGCGCTGCCGGTTGAAATCCGTTTGTATGACCGTCTGTTCAGCGTGCCTAACCCAGGTGCTGCGGATGATTTCCTGTCGGTGATTAACCCGGAATCGCTGGTGATCAAACAGGGCTTTGCTGAACCGTCGCTGAAAGATGCGGTTGCGGGTAAAGCATTCCAGTTTGAGCGTGAAGGTTACTTCTGCCTCGATAGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAA", + "dna_sequence_length": 1665, + "functions": [ + "glutamyl-tRNA synthetase" + ], + "id": "CDS_666", + "location": [ + [ + "NC_000913", + 706093, + "+", + 1665 + ] + ], + "md5": "8dcf26ce58343e9468d6c7031a4bd392", + "parent_gene": "", + "protein_md5": "fde8f8b6cc11b1c3ee29baf3aac96d3e", + "protein_translation": "MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE", + "protein_translation_length": 554, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002323" + ], + [ + "gene_synonym", + "ECK0669" + ], + [ + "gene_synonym", + "EcoGene:EG13659" + ], + [ + "gene_synonym", + "GI:16128657" + ], + [ + "gene_synonym", + "GeneID:945296" + ], + [ + "gene_synonym", + "JW0667" + ], + [ + "gene_synonym", + "NP_415207.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75733" + ], + [ + "gene_synonym", + "b0681" + ], + [ + "gene_synonym", + "chiP" + ], + [ + "gene_synonym", + "ybfM" + ] + ], + "dna_sequence": "ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTTACCGACGGCGACAAATACAAAACCAACCTTTCTCACTCCACCTGGAATGCCAACCTCGATTTTCAGTCCGGTTATGCTGCTGATATGTTCGGCCTTGATATTGCTGCGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCGAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGTGCGTTGAGTTTCTCCTACATGTGGACCAACGAATACAAAGCGCCGTGGCATCTGGAAATGGATGAGTTTTATCAGAACGATAAAACCACCAAAGTTGATTATCTGCACTCCTTTGGGGCGAAATACGACTTCAAAAATAACTTCGTACTGGAAGCGGCATTTGGTCAGGCGGAAGGGTATATCGATCAATATTTTGCCAAAGCCAGCTACAAATTTGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGTCAGCAGGGATACTTCCTGCAACGTATGACTCCAACCTACGCTTCCTCAAACGGTCGCCTGGATATCTGGTGGGATAACCGTTCTGACTTCAACGCCAACGGCGAAAAAGCGGTCTTCTTCGGTGCGATGTATGACCTGAAAAACTGGAATCTTCCAGGCTTCGCCATCGGCGCTTCCTACGTTTACGCATGGGATGCTAAACCTGCGACCTGGCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGAATACGACAACCACTCCGACATCCCAAGCTGGGGCGGTGGTTACGGCAACATCTTCCAGGATGAGCGTGACGTGAAATTTATGGTAATCGCACCATTCACCATCTTCTGA", + "dna_sequence_length": 1407, + "functions": [ + "chitoporin, uptake of chitosugars" + ], + "id": "CDS_667", + "location": [ + [ + "NC_000913", + 708334, + "+", + 1407 + ] + ], + "md5": "0ebd39b4e23624736997bd0fc58f4f9f", + "parent_gene": "", + "protein_md5": "06812314a177692fc1efffbdec294bc3", + "protein_translation": "MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSFGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNIFQDERDVKFMVIAPFTIF", + "protein_translation_length": 468, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002325" + ], + [ + "gene_synonym", + "ECK0670" + ], + [ + "gene_synonym", + "EcoGene:EG13660" + ], + [ + "gene_synonym", + "GI:16128658" + ], + [ + "gene_synonym", + "GeneID:945713" + ], + [ + "gene_synonym", + "JW0668" + ], + [ + "gene_synonym", + "NP_415208.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75734" + ], + [ + "gene_synonym", + "b0682" + ], + [ + "gene_synonym", + "chiQ" + ], + [ + "gene_synonym", + "ybfN" + ] + ], + "dna_sequence": "ATGAAAAAACTGATTCTCATCGCCATAATGGCATCGGGGCTGGTAGCTTGTGCGCAATCAACCGCGCCACAGGAAGACAGTCGTCTGAAAGAGGCATACAGCGCCTGTATCAACACCGCACAAGGTTCGCCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAAGAGAAACAACATCAGCAGTTTGCCGACCAGGAAAGTGTACGCGTACTGGATTATCAGCAGTGTCTGCGTGCAACGCAAACCGGAAATGATCAGGCGGTGAAAGCCGATTGTGATAAAGTCTGGCAGGAAATACGCAGTAATAACAAATAA", + "dna_sequence_length": 327, + "functions": [ + "chitosugar-induced verified lipoprotein" + ], + "id": "CDS_668", + "location": [ + [ + "NC_000913", + 709790, + "+", + 327 + ] + ], + "md5": "358c96eac35edfc67daba061793db1f0", + "parent_gene": "", + "protein_md5": "b536ea2d05072cdf50386069dc233958", + "protein_translation": "MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQEIRSNNK", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002327" + ], + [ + "gene_synonym", + "ECK0671" + ], + [ + "gene_synonym", + "EcoGene:EG10359" + ], + [ + "gene_synonym", + "GI:16128659" + ], + [ + "gene_synonym", + "GeneID:945295" + ], + [ + "gene_synonym", + "JW0669" + ], + [ + "gene_synonym", + "NP_415209.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9A9" + ], + [ + "gene_synonym", + "b0683" + ], + [ + "gene_synonym", + "fur" + ] + ], + "dna_sequence": "ATGACTGATAACAATACCGCCCTAAAGAAAGCTGGCCTGAAAGTAACGCTTCCTCGTTTAAAAATCCTGGAAGTTCTTCAGGAGCCGGACAACCATCACGTCAGTGCGGAAGATTTATACAAACGTCTGATCGATATGGGTGAAGAAATTGGTCTGGCTACGGTATATCGCGTACTGAACCAGTTTGACGACGCTGGTATCGTCACCCGCCACAATTTTGAAGGCGGTAAATCCGTATTTGAACTGACACAGCAACATCACCACGATCACCTGATCTGCCTCGACTGCGGCAAGGTTATCGAATTTAGTGATGATTCCATCGAAGCGCGTCAGCGTGAAATTGCCGCAAAACATGGCATTCGCCTGACTAACCACAGTCTCTATCTTTACGGTCACTGTGCCGAAGGCGATTGCCGCGAAGATGAACATGCGCACGAAGGCAAATAA", + "dna_sequence_length": 447, + "functions": [ + "ferric iron uptake regulon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_669", + "location": [ + [ + "NC_000913", + 710646, + "-", + 447 + ] + ], + "md5": "c4db78456601a69039856acd78af0ca6", + "parent_gene": "", + "protein_md5": "fb5cad1bdf5c957282b288c2e61ba77c", + "protein_translation": "MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4461" + ], + [ + "gene_synonym", + "EcoGene:EG14465" + ], + [ + "gene_synonym", + "GI:157783150" + ], + [ + "gene_synonym", + "GeneID:5625562" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A8DYP9" + ], + [ + "gene_synonym", + "YP_001491546.1" + ], + [ + "gene_synonym", + "b4637" + ], + [ + "gene_synonym", + "uof" + ] + ], + "dna_sequence": "ATGATACGCATTATCTCAAGAGCAAATTCTGTCACTTCTTCTAATGAAGTGAACCGCTTAGTAACAGGACAGATTCCGCATGACTGA", + "dna_sequence_length": 87, + "functions": [ + "ryhB-regulated fur leader peptide" + ], + "id": "CDS_670", + "location": [ + [ + "NC_000913", + 710725, + "-", + 87 + ] + ], + "md5": "8872e3b6d30725e0ee4f00e04b2a9ebb", + "parent_gene": "", + "protein_md5": "f0d5ee7d7924ba548933579cce2c3a11", + "protein_translation": "MIRIISRANSVTSSNEVNRLVTGQIPHD", + "protein_translation_length": 28, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002332" + ], + [ + "gene_synonym", + "ECK0672" + ], + [ + "gene_synonym", + "EcoGene:EG10318" + ], + [ + "gene_synonym", + "GI:16128660" + ], + [ + "gene_synonym", + "GeneID:945293" + ], + [ + "gene_synonym", + "JW0671" + ], + [ + "gene_synonym", + "NP_415210.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61949" + ], + [ + "gene_synonym", + "b0684" + ], + [ + "gene_synonym", + "fldA" + ] + ], + "dna_sequence": "ATGGCTATCACTGGCATCTTTTTCGGCAGCGACACCGGTAATACCGAAAATATCGCAAAAATGATTCAAAAACAGCTTGGTAAAGACGTTGCCGATGTCCATGACATTGCAAAAAGCAGCAAAGAAGATCTGGAAGCTTATGACATTCTGCTGCTGGGCATCCCAACCTGGTATTACGGCGAAGCGCAGTGTGACTGGGATGACTTCTTCCCGACTCTCGAAGAGATTGATTTCAACGGCAAACTGGTTGCGCTGTTTGGTTGTGGTGACCAGGAAGATTACGCCGAATATTTCTGCGACGCATTGGGCACCATCCGCGACATCATTGAACCGCGCGGTGCAACCATCGTTGGTCACTGGCCAACTGCGGGCTATCATTTCGAAGCATCAAAAGGTCTGGCAGATGACGACCACTTTGTCGGTCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTTCTGAAGAGTTGCATCTCGACGAAATTCTCAATGCCTGA", + "dna_sequence_length": 531, + "functions": [ + "flavodoxin 1" + ], + "id": "CDS_671", + "location": [ + [ + "NC_000913", + 711465, + "-", + 531 + ] + ], + "md5": "5fa08e817d3c0f0960d3e8a0c8747e47", + "parent_gene": "", + "protein_md5": "0791e3a65ee6629fa7d1b8450305c4f7", + "protein_translation": "MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002335" + ], + [ + "gene_synonym", + "ECK0673" + ], + [ + "gene_synonym", + "EcoGene:EG11775" + ], + [ + "gene_synonym", + "GI:90111159" + ], + [ + "gene_synonym", + "GeneID:945291" + ], + [ + "gene_synonym", + "JW5816" + ], + [ + "gene_synonym", + "NP_415211.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAU7" + ], + [ + "gene_synonym", + "b0685" + ], + [ + "gene_synonym", + "ybfE" + ] + ], + "dna_sequence": "ATGGCCAAAGAACAAACGGACCGTACGACATTAGATCTGTTCGCGCACGAGCGTCGACCGGGACGACCGAAAACTAATCCGCTTTCGCGCGATGAACAGCTGCGTATTAATAAACGCAACCAGCTAAAACGCGACAAAGTACGTGGCCTTAAGCGTGTCGAACTGAAGCTGAACGCGGAAGCTGTCGAGGCGCTGAACGAGCTGGCGGAGTCGCGCAATATGAGCCGTAGCGAACTGATCGAAGAGATGTTAATGCAGCAACTGGCGGCGCTGCGTAGTCAGGGCATCGTTTAA", + "dna_sequence_length": 294, + "functions": [ + "LexA-regulated protein, CopB family" + ], + "id": "CDS_672", + "location": [ + [ + "NC_000913", + 711898, + "-", + 294 + ] + ], + "md5": "653e8e993d3b093768ce986c3309579c", + "parent_gene": "", + "protein_md5": "0782f6f252c33425908184b0f367952b", + "protein_translation": "MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002337" + ], + [ + "gene_synonym", + "ECK0674" + ], + [ + "gene_synonym", + "EcoGene:EG11776" + ], + [ + "gene_synonym", + "GI:16128662" + ], + [ + "gene_synonym", + "GeneID:945288" + ], + [ + "gene_synonym", + "JW0673" + ], + [ + "gene_synonym", + "NP_415212.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75736" + ], + [ + "gene_synonym", + "b0686" + ], + [ + "gene_synonym", + "ybfF" + ] + ], + "dna_sequence": "ATGAAATTGAATATCCGCGCGCAAACTGCACAAAACCAGCACAATAATTCTCCCATCGTTCTTGTCCACGGTCTGTTTGGCAGCCTCGACAACCTTGGCGTACTGGCTCGCGATCTGGTAAACGATCACAATATCATCCAGGTTGATATGCGTAACCACGGTCTTTCACCGAGAGATCCGGTAATGAATTACCCGGCGATGGCGCAGGATCTTGTTGATACTCTGGATGCACAGCAGATCGACAAAGCAACATTTATCGGTCACTCCATGGGCGGTAAAGCGGTAATGGCACTTACTGCACTAGCCTCCGATCGCATCGATAAACTGGTGGCGATCGATATCGCGCCGGTCGACTATCACGTACGCCGTCATGATGAGATTTTTGCGGCTATCAACGCGGTCAGTGAATCGGACGCACAAACTCGCCAGCAAGCAGCAGCAATAATGCGCCAGCATCTTAATGAAGAAGGGGTGATTCAGTTTCTGCTGAAATCTTTTGTTGACGGGGAGTGGCGCTTTAACGTGCCGGTATTGTGGGATCAGTATCCGCATATTGTAGGTTGGGAGAAAATCCCGGCATGGGATCACCCTGCCCTGTTTATCCCTGGCGGCAATTCTCCGTATGTTAGCGAGCAGTACCGTGATGATTTACTGGCTCAATTTCCACAGGCACGGGCGCATGTGATTGCAGGCGCGGGTCACTGGGTCCATGCTGAAAAACCGGATGCGGTATTACGCGCTATCCGTCGCTATCTCAATGATTAA", + "dna_sequence_length": 765, + "functions": [ + "acyl-CoA esterase" + ], + "id": "CDS_673", + "location": [ + [ + "NC_000913", + 712802, + "-", + 765 + ] + ], + "md5": "ed12e9c892eefa9b286e2b46a0b8da5f", + "parent_gene": "", + "protein_md5": "d840bf9ea85caa98f05d63d2ec229980", + "protein_translation": "MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002343" + ], + [ + "gene_synonym", + "ECK0675" + ], + [ + "gene_synonym", + "EcoGene:EG12197" + ], + [ + "gene_synonym", + "GI:16128663" + ], + [ + "gene_synonym", + "GeneID:945272" + ], + [ + "gene_synonym", + "JW0674" + ], + [ + "gene_synonym", + "NP_415213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFY8" + ], + [ + "gene_synonym", + "b0687" + ], + [ + "gene_synonym", + "hsm-1" + ], + [ + "gene_synonym", + "seqA" + ] + ], + "dna_sequence": "ATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAGAGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTATGCTGCTGTTGTCTACACTATATTCTCTTGACGCCCAGGCGTTTGCCGAAGCAACGGAATCGTTGCACGGTCGTACACGCGTTTACTTTGCGGCAGATGAACAAACGCTGCTGAAAAATGGTAATCAGACCAAGCCGAAACATGTGCCAGGCACGCCGTATTGGGTGATCACCAACACCAACACCGGCCGTAAATGCAGCATGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAA", + "dna_sequence_length": 546, + "functions": [ + "negative modulator of initiation of replication" + ], + "id": "CDS_674", + "location": [ + [ + "NC_000913", + 712987, + "+", + 546 + ] + ], + "md5": "a19d05fceae36c7113bd195a5aa6b8d7", + "parent_gene": "", + "protein_md5": "cd37c86bc2968165e04b37190c24fbe5", + "protein_translation": "MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAPVTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGTI", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002345" + ], + [ + "gene_synonym", + "ECK0676" + ], + [ + "gene_synonym", + "EcoGene:EG12144" + ], + [ + "gene_synonym", + "GI:16128664" + ], + [ + "gene_synonym", + "GeneID:945271" + ], + [ + "gene_synonym", + "JW0675" + ], + [ + "gene_synonym", + "NP_415214.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36938" + ], + [ + "gene_synonym", + "b0688" + ], + [ + "gene_synonym", + "blu" + ], + [ + "gene_synonym", + "pgm" + ], + [ + "gene_synonym", + "pgmA" + ] + ], + "dna_sequence": "ATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACAGAGTGATTTGATTAACGTCGCCCAACTGACGGCGCAATATTATGTACTGAAACCAGAAGCAGGGAATGCGGAGCACGCGGTGAAATTCGGTACTTCCGGTCACCGTGGCAGTGCAGCGCGCCACAGCTTTAACGAGCCGCACATTCTGGCGATCGCTCAGGCAATTGCTGAAGAACGTGCGAAAAACGGCATCACTGGCCCTTGCTATGTGGGTAAAGATACTCACGCCCTGTCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGCTGGCAGACGGTATCGTGATTACACCGTCCCATAACCCGCCGGAAGATGGTGGAATCAAATACAATCCGCCAAATGGTGGCCCGGCTGATACCAACGTCACTAAAGTGGTGGAAGACAGGGCCAACGCACTGCTGGCCGATGGCCTGAAAGGCGTGAAGCGTATCTCCCTCGACGAAGCGATGGCATCCGGTCATGTGAAAGAGCAGGATCTGGTGCAGCCGTTCGTGGAAGGTCTGGCCGATATCGTTGATATGGCCGCGATTCAGAAAGCGGGCCTGACGCTGGGCGTTGATCCGCTGGGCGGTTCCGGTATCGAATACTGGAAGCGTATTGGCGAGTATTACAACCTCAACCTGACTATCGTTAACGATCAGGTCGATCAAACCTTCCGCTTTATGCACCTTGATAAAGACGGCGCGATCCGTATGGACTGCTCCTCCGAGTGTGCGATGGCGGGCCTGCTGGCACTGCGTGATAAGTTCGATCTGGCGTTTGCTAACGACCCGGATTATGACCGTCACGGTATCGTCACTCCGGCAGGTTTGATGAATCCGAACCACTACCTGGCGGTGGCAATCAATTACCTGTTCCAGCATCGTCCGCAGTGGGGCAAAGATGTTGCCGTCGGTAAAACGCTGGTTTCATCTGCGATGATCGACCGTGTGGTCAACGACTTGGGCCGTAAACTGGTAGAAGTCCCGGTAGGTTTCAAATGGTTTGTCGATGGTCTGTTCGACGGCAGCTTCGGCTTTGGCGGCGAAGAGAGTGCAGGGGCTTCCTTCCTGCGTTTCGACGGCACGCCGTGGTCCACCGACAAAGACGGCATCATCATGTGTCTGCTGGCGGCGGAAATCACCGCTGTCACCGGTAAGAACCCGCAGGAACACTACAACGAACTGGCAAAACGCTTTGGTGCGCCGAGCTACAACCGTTTGCAGGCAGCTGCGACTTCCGCACAAAAAGCGGCGCTGTCTAAGCTGTCTCCGGAAATGGTGAGCGCCAGCACCCTGGCAGGTGACCCGATCACCGCGCGCCTGACTGCTGCTCCGGGCAACGGTGCTTCTATTGGCGGTCTGAAAGTGATGACTGACAACGGCTGGTTCGCCGCGCGTCCGTCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAA", + "dna_sequence_length": 1641, + "functions": [ + "phosphoglucomutase" + ], + "id": "CDS_675", + "location": [ + [ + "NC_000913", + 713558, + "+", + 1641 + ] + ], + "md5": "026788065c355a1b54683f66b755cefe", + "parent_gene": "", + "protein_md5": "5de89c9e69d5d46ace30928078064499", + "protein_translation": "MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA", + "protein_translation_length": 546, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002350" + ], + [ + "gene_synonym", + "ECK0677" + ], + [ + "gene_synonym", + "EcoGene:EG14158" + ], + [ + "gene_synonym", + "GI:16128665" + ], + [ + "gene_synonym", + "GeneID:945274" + ], + [ + "gene_synonym", + "JW0676" + ], + [ + "gene_synonym", + "NP_415215.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75737" + ], + [ + "gene_synonym", + "b0689" + ], + [ + "gene_synonym", + "ybfP" + ] + ], + "dna_sequence": "ATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTAATTACCGCCACATTACTGCTGACTGCATGCGCCCAACCTGAACAATCATCATTAGCTGGCGACTGGTTACTGACCCCTAAAGATAAAACCAGAGGATTAACGGGTAGCATTGCGGTAAATATTGCACCTTTCCGGTGTAAGACAAATTGCCGTGGTGATAACTTACCTGATAATACCCGCCGCTGGCAGTTGTCAGGCGGGAACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTTTGGCTCGATGATGCATGTCGGGATTATTGAGTTACGACGCTGCCAGTCAGAAAATTGCCAGCAAGAATTGAAAGCGATAAATACACATTAA", + "dna_sequence_length": 495, + "functions": [ + "lipoprotein" + ], + "id": "CDS_676", + "location": [ + [ + "NC_000913", + 715412, + "+", + 495 + ] + ], + "md5": "ca45a24917b37f02ddb6f0757d0987f4", + "parent_gene": "", + "protein_md5": "03e199ebe2f334f0d0f1823488a834d9", + "protein_translation": "MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002352" + ], + [ + "gene_synonym", + "ASAP:ABE-0002355" + ], + [ + "gene_synonym", + "ECK0678" + ], + [ + "gene_synonym", + "EcoGene:EG11777" + ], + [ + "gene_synonym", + "GeneID:945287" + ], + [ + "gene_synonym", + "JW5094" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37003" + ], + [ + "gene_synonym", + "b0691" + ], + [ + "gene_synonym", + "ybfG" + ], + [ + "gene_synonym", + "ybfH" + ] + ], + "dna_sequence": "ATGCGTGAAATGAATCAGTTAGTAAATACTGAAGATTCAGCCTGGCCAATAATCCAGAACTGGTTAAAAGACGCCACAAACCATACCGAACTCTTACCGGTTAATAAAGATTTAGCCGAAACCGCACTTTATCAATTACAGGTGACAACAAAATCACCGATGGGTGCGCTTGTCTATGGCTCCGGAGGTCTGCTGATTGATAATGGTTAGTTACGCATAGCAGGATCTGGTCACCCCCGGTTGCCACGAGATCCAGTAAGTTGGACACAACGCCCTGAATTCGCAGGCGTGCGGGCTTTACCCATCGCTGACGATGTCGCAGGGGTAATTTTTGCTCTTAATGGTGGCGATCTTGGGGAAGATACTGGCTGCGTTTATTATTTTGCGCCAGATACGCTGAATTGGGAAAGTCTGGAAGTTGGATATTCTGAGTTTCTTCAGTGGGCATTATCCGGTGATTTAGATACCTTCTATGAAAATGTACGATGGCAGCAATGGCGAGAAGACGTAATAAAATTATCGGCAACGGAAGCCTTCACGTTCTACCCTTTCTTATGGGTACAAAGTGAAGAAGCAAGAACAAGAAAAGTTATTTCGCTTACTGAACTCTGGGAAATGCAGTATCAAATGAAAGAAACATTCACGCAATAA", + "dna_sequence_length": 651, + "id": "CDS_677", + "location": [ + [ + "NC_000913", + 716597, + "-", + 651 + ] + ], + "md5": "b661c9d4d2451757a3c2189588e2fd35", + "parent_gene": "", + "protein_md5": "a9f1215d4fb48a52522112447b18deaf", + "protein_translation": "MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNG", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4436" + ], + [ + "gene_synonym", + "EcoGene:EG12390" + ], + [ + "gene_synonym", + "GeneID:5625563" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39901" + ], + [ + "gene_synonym", + "b4636" + ], + [ + "gene_synonym", + "ybfI" + ] + ], + "dna_sequence": "ATCCGGCAGATGTAGGGTCTAAACGCGATCGAACACAGCAACTATTTGCGTAATTATATGGGGCATCTGCGACAAAAACTGGAACAGGATCCGGCCCGGCCTCGCCATTTTATTACTGAAACCGGTATTGGGTATCGGTTTATGCTTTGA", + "dna_sequence_length": 150, + "id": "CDS_678", + "location": [ + [ + "NC_000913", + 716870, + "-", + 150 + ] + ], + "md5": "9f3a76890e9a0f22289a58f83a9aab03", + "parent_gene": "", + "protein_md5": "a41a9686032c0cb106fb3ca299fcc9d0", + "protein_translation": "IRQM", + "protein_translation_length": 4, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002360" + ], + [ + "gene_synonym", + "ECK0680" + ], + [ + "gene_synonym", + "EcoGene:EG10753" + ], + [ + "gene_synonym", + "GI:16128668" + ], + [ + "gene_synonym", + "GeneID:945422" + ], + [ + "gene_synonym", + "JW0679" + ], + [ + "gene_synonym", + "NP_415219.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAF1" + ], + [ + "gene_synonym", + "b0692" + ], + [ + "gene_synonym", + "potE" + ] + ], + "dna_sequence": "ATGAGTCAGGCTAAATCGAACAAAATGGGCGTCGTTCAGTTAACCATACTGACGATGGTCAACATGATGGGCTCCGGTATCATCATGCTGCCGACAAAGCTTGCCGAAGTCGGGACAATCTCAATTATCTCCTGGCTGGTGACAGCCGTAGGCTCAATGGCACTGGCATGGGCATTCGCAAAATGCGGTATGTTCAGCCGTAAATCAGGCGGTATGGGCGGTTATGCCGAGTATGCTTTCGGTAAATCCGGTAACTTTATGGCGAACTATACCTACGGCGTCTCACTGCTGATTGCTAACGTCGCGATTGCTATTTCGGCGGTTGGTTACGGCACCGAACTGCTCGGCGCGAGTTTGTCGCCAGTGCAGATTGGTCTTGCGACCATCGGGGTGCTGTGGATTTGTACCGTGGCTAACTTTGGTGGTGCGCGCATTACCGGGCAAATCAGTAGCATTACCGTGTGGGGGGTCATTATTCCGGTCGTCGGTCTGTGCATTATTGGCTGGTTCTGGTTTAGCCCGACGCTGTACGTTGATTCCTGGAATCCGCATCATGCACCGTTCTTCAGTGCGGTAGGTTCTTCCATCGCTATGACGCTGTGGGCTTTTCTTGGTCTGGAGTCTGCGTGTGCGAATACTGATGTAGTGGAAAACCCGGAACGTAATGTGCCAATCGCGGTACTCGGCGGTACGTTAGGTGCGGCGGTGATTTATATCGTCTCCACCAACGTGATTGCCGGGATTGTGCCAAATATGGAGCTGGCAAATTCAACGGCACCATTTGGTCTGGCCTTCGCGCAGATGTTCACGCCGGAAGTGGGTAAAGTCATTATGGCGCTGATGGTGATGTCCTGCTGCGGTTCGCTACTTGGCTGGCAGTTCACCATTGCCCAGGTGTTTAAATCTTCATCTGATGAAGGCTACTTCCCTAAAATTTTCTCCCGTGTAACCAAAGTGGATGCACCGGTGCAGGGAATGTTGACCATTGTGATTATTCAGAGTGGATTGGCACTGATGACCATTAGCCCGTCGCTAAACAGTCAGTTCAACGTGCTGGTTAACCTGGCCGTGGTGACCAATATCATTCCGTATATTCTGTCAATGGCGGCATTAGTCATTATTCAGAAGGTCGCTAATGTGCCCCCCTCAAAAGCGAAAGTTGCAAACTTTGTTGCTTTTGTTGGCGCGATGTATAGCTTTTATGCGCTGTACTCATCCGGGGAAGAAGCCATGCTGTACGGTTCCATCGTGACCTTCCTTGGTTGGACACTGTATGGTCTGGTATCACCACGCTTTGAACTGAAAAATAAACACGGTTAA", + "dna_sequence_length": 1320, + "functions": [ + "putrescine/proton symporter: putrescine/ornithine antiporter" + ], + "id": "CDS_679", + "location": [ + [ + "NC_000913", + 718265, + "-", + 1320 + ] + ], + "md5": "197863c1871fce606e47c85b9b86fbf8", + "parent_gene": "", + "protein_md5": "9d77c70a533b14ea06ac555c8f2a2c77", + "protein_translation": "MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002362" + ], + [ + "gene_synonym", + "ECK0681" + ], + [ + "gene_synonym", + "EcoGene:EG10964" + ], + [ + "gene_synonym", + "GI:16128669" + ], + [ + "gene_synonym", + "GeneID:945297" + ], + [ + "gene_synonym", + "JW0680" + ], + [ + "gene_synonym", + "NP_415220.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24169" + ], + [ + "gene_synonym", + "b0693" + ], + [ + "gene_synonym", + "speF" + ] + ], + "dna_sequence": "ATGTCAAAATTAAAAATTGCGGTTAGTGATTCTTGCCCGGACTGTTTTACCACGCAGCGAGAATGTATCTACATTAATGAAAGTCGTAATATCGATGTGGCGGCAATAGTTTTATCGCTCAACGATGTTACATGCGGAAAACTCGATGAAATCGATGCCACGGGTTATGGCATCCCGGTATTTATTGCTACTGAAAATCAAGAACGTGTACCCGCAGAGTATTTGCCCCGTATTTCGGGTGTCTTTGAGAATTGCGAATCGCGACGAGAATTTTATGGTCGCCAGTTAGAAACCGCTGCCAGCCATTATGAAACTCAACTGCGCCCACCTTTCTTCCGCGCACTGGTCGATTATGTCAATCAAGGTAACAGCGCGTTTGATTGCCCTGGTCATCAGGGCGGCGAATTTTTCCGTCGCCATCCGGCGGGGAATCAGTTTGTGGAATACTTTGGTGAGGCGCTGTTCCGTGCCGACTTGTGCAACGCCGACGTAGCGATGGGCGATCTGCTGATTCACGAAGGCGCGCCATGCATTGCACAGCAACATGCGGCAAAAGTGTTTAATGCCGATAAAACCTACTTCGTTTTAAATGGCACTTCATCTTCTAACAAAGTGGTTTTAAACGCCCTGCTAACACCGGGTGATCTGGTGCTGTTTGATCGCAATAACCACAAATCTAACCACCACGGAGCGTTGCTACAGGCTGGTGCAACACCGGTTTATCTGGAAACGGCACGTAACCCGTATGGCTTTATCGGTGGCATTGATGCGCACTGTTTTGAAGAAAGTTACCTGCGTGAGCTGATCGCGGAAGTCGCACCGCAGCGGGCAAAAGAGGCTCGTCCTTTCCGCCTCGCTGTGATTCAGTTAGGCACCTACGACGGTACGATTTATAACGCCCGCCAAGTGGTGGATAAAATTGGTCATCTGTGTGACTACATCCTGTTTGACTCAGCATGGGTCGGCTATGAACAGTTTATTCCGATGATGGCGGACTGTTCGCCGCTGTTGCTGGATCTTAATGAGAACGATCCGGGTATTCTGGTTACGCAATCTGTGCATAAACAACAGGCTGGTTTTTCTCAGACTTCACAAATTCATAAAAAAGACAGCCACATCAAAGGGCAACAGCGTTATGTACCGCACAAACGCATGAACAACGCCTTTATGATGCACGCCTCCACCAGCCCGTTCTATCCGCTGTTTGCCGCACTGAATATCAACGCCAAAATGCATGAAGGTGTCAGCGGTCGTAATATGTGGATGGATTGTGTGGTAAATGGCATTAATGCCCGCAAACTGATCCTCGATAACTGTCAGCATATTCGTCCGTTCGTACCTGAACTGGTGGATGGTAAACCCTGGCAGTCGTATGAAACAGCGCAAATTGCGGTTGATCTGCGCTTCTTCCAGTTTGTACCAGGGGAACACTGGCATTCTTTTGAAGGCTATGCAGAGAATCAATACTTTGTCGATCCATGCAAACTGTTGCTGACAACCCCAGGTATTGATGCACGTAACGGCGAATATGAAGCGTTCGGTGTACCCGCGACGATTCTTGCTAACTTCCTGCGCGAAAATGGCGTAGTGCCGGAAAAATGCGATCTTAACTCCATCCTCTTCCTGCTGACTCCGGCAGAAGATATGGCCAAACTTCAGCAACTTGTTGCCCTGCTGGTACGCTTCGAAAAACTGCTTGAGTCCGACGCGCCATTAGCAGAAGTGCTACCTTCCATCTACAAACAGCATGAAGAGCGCTACGCCGGTTATACCCTGCGTCAGTTGTGTCAGGAAATGCATGATTTGTATGCCCGCCACAACGTGAAACAACTGCAAAAAGAGATGTTCCGTAAGGAGCACTTCCCACGCGTCAGCATGAATCCGCAAGAAGCCAACTACGCCTATTTACGCGGTGAAGTGGAACTGGTTCGTCTGCCGGATGCAGAAGGCCGTATCGCTGCCGAAGGTGCGCTTCCTTATCCTCCGGGTGTGCTGTGTGTTGTTCCGGGTGAAATCTGGGGTGGTGCTGTTCTGCGTTACTTCAGCGCTCTGGAAGAAGGGATCAACCTGCTGCCAGGTTTTGCACCGGAGCTGCAGGGTGTCTATATCGAAGAACATGATGGTCGTAAGCAAGTTTGGTGCTATGTCATCAAGCCTCGTGATGCGCAAAGCACCCTGTTGAAAGGGGAAAAATTATGA", + "dna_sequence_length": 2199, + "functions": [ + "ornithine decarboxylase isozyme, inducible" + ], + "id": "CDS_680", + "location": [ + [ + "NC_000913", + 720460, + "-", + 2199 + ] + ], + "md5": "0244680007c287bddf85754aed3bcb90", + "parent_gene": "", + "protein_md5": "f50035957827788207ebae32b7f2bf47", + "protein_translation": "MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVTCGKLDEIDATGYGIPVFIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASHYETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL", + "protein_translation_length": 732, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4400" + ], + [ + "gene_synonym", + "EcoGene:EG12869" + ], + [ + "gene_synonym", + "GI:145698231" + ], + [ + "gene_synonym", + "GeneID:948953" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46121" + ], + [ + "gene_synonym", + "YP_001165310.1" + ], + [ + "gene_synonym", + "b4590" + ], + [ + "gene_synonym", + "ybfK" + ] + ], + "dna_sequence": "ATGCAGAAACCCTTACCAGTCAGGTGGCTGATAATACAAGGGTTAACAGAGAATGAGCACTGCGGAATACAGGCATATGCCTGTAATACAGAGAGTCAGGAAGACCTGTACGCTGAAGTGCCCTTAGTCGGTAGACTAACGGGCATTGAAGAAGTGAAAGTCGAAGCTATTGCGATGAGCAAACTTCATAATATGAGTTGTCCGCCTTATATGGGGCATAGTGCGGCTGTTATTTTCCATTTAATTTACCTTTCCTGA", + "dna_sequence_length": 258, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_681", + "location": [ + [ + "NC_000913", + 720583, + "+", + 258 + ] + ], + "md5": "55e9e7c5ebfa2c0a7dc8eb5914c2f0b9", + "parent_gene": "", + "protein_md5": "0bdd73c75df3d4518d75cc2b2f5c0de0", + "protein_translation": "MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVGRLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002366" + ], + [ + "gene_synonym", + "ECK0682" + ], + [ + "gene_synonym", + "EcoGene:EG10517" + ], + [ + "gene_synonym", + "GI:16128670" + ], + [ + "gene_synonym", + "GeneID:945302" + ], + [ + "gene_synonym", + "JW5096" + ], + [ + "gene_synonym", + "NP_415222.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21866" + ], + [ + "gene_synonym", + "b0694" + ], + [ + "gene_synonym", + "kdpE" + ] + ], + "dna_sequence": "GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCGCGTCTTTGAGGCCGAAACGCTGCAACGCGGCTTGCTGGAAGCGGCAACCCGTAAGCCAGATTTGATTATTCTCGATCTCGGCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCGCGGTGCCGGTGATTGTGCTTTCCGCACGCAGCGAAGAGAGCGACAAAATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTGAGTAAGCCGTTTGGCATTGGCGAATTGCAGGCCCGTCTGCGCGTCGCATTACGCCGCCACTCTGCCACCACCGCGCCCGATCCGCTGGTAAAATTTTCCGATGTTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACACCAATTGAGTTCCGCCTGCTGGCGGTGCTGCTCAACAATGCCGGAAAAGTACTCACCCAGCGCCAGCTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGAACACAGTCACTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCCGCCCGCCCACGCCATTTCATTACTGAAACCGGTATTGGCTATCGGTTTATGCTTTGA", + "dna_sequence_length": 678, + "functions": [ + "response regulator in two-component regulatory system with KdpD" + ], + "id": "CDS_682", + "location": [ + [ + "NC_000913", + 721733, + "-", + 678 + ] + ], + "md5": "4624c796f754056f2ebe61068c269202", + "parent_gene": "", + "protein_md5": "ca0f00f07f0dfb8c751337fc596f986c", + "protein_translation": "MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002368" + ], + [ + "gene_synonym", + "ECK0683" + ], + [ + "gene_synonym", + "EcoGene:EG10516" + ], + [ + "gene_synonym", + "GI:16128671" + ], + [ + "gene_synonym", + "GeneID:946744" + ], + [ + "gene_synonym", + "JW0683" + ], + [ + "gene_synonym", + "NP_415223.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21865" + ], + [ + "gene_synonym", + "b0695" + ], + [ + "gene_synonym", + "kac" + ], + [ + "gene_synonym", + "kdpD" + ] + ], + "dna_sequence": "ATGAATAACGAACCCTTACGTCCCGACCCCGATCGTCTGCTGGAACAAACTGCCGCGCCGCATCGGGGGAAGCTGAAAGTTTTCTTCGGTGCCTGTGCAGGCGTCGGGAAGACCTGGGCGATGCTGGCAGAAGCCCAGCGACTGCGGGCGCAAGGGCTGGATATTGTGGTTGGCGTGGTAGAAACCCACGGGCGAAAAGATACCGCCGCCATGCTGGAAGGGCTGGCTGTTCTGCCGTTAAAACGCCAGGCGTACCGTGGGCGGCATATCAGCGAGTTTGATCTCGATGCCGCCCTCGCCCGCCGCCCGGCGCTGATCTTAATGGACGAACTGGCGCACAGTAATGCGCCAGGTTCCCGTCATCCCAAACGCTGGCAGGATATCGAAGAACTGCTGGAAGCTGGCATTGATGTTTTCACTACCGTCAACGTTCAGCATCTGGAAAGTCTGAATGATGTGGTCAGCGGCGTCACCGGAATTCAGGTACGGGAAACCGTGCCCGATCCTTTTTTCGATGCCGCCGACGACGTGGTGCTGGTGGACTTGCCCCCGGACGATCTGCGCCAGCGGCTGAAAGAAGGCAAAGTCTATATTGCCGGGCAGGCGGAGCGCGCCATTGAACATTTTTTCCGCAAAGGTAATCTGATCGCCCTGCGCGAACTGGCACTGCGCCGTACTGCCGATCGCGTTGATGAGCAAATGCGCGCCTGGCGGGGGCATCCTGGCGAAGAGAAAGTGTGGCACACGCGCGACGCGATCCTTTTATGCATCGGCCATAACACCGGCAGCGAAAAACTGGTCCGCGCAGCGGCGCGGCTGGCGTCACGGCTGGGTAGCGTCTGGCACGCGGTGTATGTTGAAACCCCTGCCCTGCACCGCTTACCGGAAAAAAAACGTCGGGCAATTCTCAGCGCCTTACGTCTGGCGCAGGAACTGGGCGCGGAGACGGCAACACTTTCTGATCCAGCGGAAGAGAAAGCGGTAGTGCGTTATGCCCGTGAACATAATCTCGGCAAGATTATTCTCGGTCGCCCGGCCTCGCGCCGCTGGTGGCGTCGGGAAACGTTTGCTGACCGACTGGCGCGCATCGCCCCCGATCTCGATCAGGTGCTGGTCGCGCTTGATGAACCACCCGCCCGCACGATTAACAACGCGCCGGATAACCGCTCTTTTAAAGACAAGTGGCGTGTACAAATTCAGGGATGCGTGGTTGCCGCCGCGTTATGCGCCGTTATCACCTTAATTGCCATGCAGTGGCTGATGGCGTTTGATGCCGCCAACCTGGTGATGCTGTATCTGCTTGGCGTGGTGGTGGTGGCGCTATTTTATGGACGCTGGCCTTCAGTGGTTGCCACCGTCATTAATGTAGTGAGTTTCGATCTCTTTTTTATCGCCCCACGCGGCACGCTCGCCGTCTCTGATGTGCAATATCTGCTGACCTTCGCGGTGATGTTAACCGTCGGGCTGGTGATCGGGAACCTTACTGCTGGCGTGCGTTATCAGGCGCGGGTAGCCCGTTACCGCGAGCAACGCACACGGCACTTATATGAAATGTCGAAAGCTCTGGCGGTGGGCCGCAGTCCGCAGGATATCGCTGCCACCAGCGAACAATTTATTGCCTCCACGTTTCATGCCCGCAGTCAGGTGTTGTTGCCCGATGACAACGGTAAATTGCAGCCGTTAACACATCCGCAAGGAATGACGCCGTGGGACGATGCCATCGCGCAGTGGAGTTTTGATAAAGGCCTGCCTGCGGGCGCGGGCACCGACACGTTACCCGGTGTACCGTACCAGATTTTGCCGCTAAAAAGCGGCGAGAAAACCTACGGGCTGGTGGTGGTGGAGCCGGGGAATCTGCGCCAGTTGATGATCCCGGAACAGCAGCGCCTGCTGGAGACGTTTACGCTGTTAGTCGCCAATGCCCTTGAGCGGCTGACGCTAACCGCCAGCGAAGAACAGGCGCGGATGGCAAGCGAACGTGAACAGATCCGCAACGCCCTGCTGGCGGCGCTTTCGCATGATTTACGCACGCCGCTTACGGTGCTGTTTGGTCAGGCAGAAATCTTAACGCTCGATCTGGCAAGCGAAGGATCACCCCACGCCCGCCAGGCCAGCGAGATCCGTCAGCATGTGCTGAACACTACCCGACTGGTGAATAATCTACTGGATATGGCGCGAATTCAGTCCGGCGGCTTTAATTTGAAGAAAGAGTGGTTAACGCTGGAAGAAGTAGTCGGCAGCGCGCTGCAAATGCTGGAACCGGGTTTATCGTCGCCCATCAATCTTTCTCTGCCAGAACCGCTGACCTTAATCCACGTTGACGGGCCACTCTTTGAACGGGTGCTGATTAATCTGCTGGAGAACGCGGTGAAATATGCGGGTGCGCAGGCCGAAATTGGTATCGATGCCCACGTTGAGGGCGAAAATCTACAACTGGATGTCTGGGATAACGGCCCCGGTCTTCCGCCAGGCCAGGAGCAGACGATATTTGATAAGTTTGCTCGCGGGAATAAAGAGTCGGCAGTACCGGGGGTAGGGCTTGGACTGGCAATTTGTCGGGCGATAGTGGATGTACACGGGGGCACTATTACCGCGTTCAACCGACCGGAAGGTGGTGCCTGTTTTCGTGTTACACTTCCCCAGCAAACTGCCCCTGAACTTGAAGAATTTCATGAGGATATGTGA", + "dna_sequence_length": 2685, + "functions": [ + "fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein" + ], + "id": "CDS_683", + "location": [ + [ + "NC_000913", + 724414, + "-", + 2685 + ] + ], + "md5": "6ec92bd62931d7eb595b298b6f9bec49", + "parent_gene": "", + "protein_md5": "9dacad23474b33facada4682d66dd949", + "protein_translation": "MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDNRSFKDKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAEIGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM", + "protein_translation_length": 894, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002374" + ], + [ + "gene_synonym", + "ECK0684" + ], + [ + "gene_synonym", + "EcoGene:EG10515" + ], + [ + "gene_synonym", + "GI:16128672" + ], + [ + "gene_synonym", + "GeneID:947508" + ], + [ + "gene_synonym", + "JW0684" + ], + [ + "gene_synonym", + "NP_415224.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03961" + ], + [ + "gene_synonym", + "b0696" + ], + [ + "gene_synonym", + "kac" + ], + [ + "gene_synonym", + "kdpC" + ] + ], + "dna_sequence": "ATGAGTGGATTACGTCCGGCATTATCAACATTTATCTTTCTGTTATTGATTACTGGCGGCGTTTACCCGCTGCTGACCACCGTACTGGGGCAATGGTGGTTTCCCTGGCAGGCCAATGGTTCGTTGATTCGTGAAGGTGATACGGTGCGCGGTTCGGCATTAATCGGGCAGAATTTTACCGGCAACGGCTATTTTCATGGTCGCCCGTCGGCAACGGCAGAAATGCCCTATAATCCACAGGCTTCTGGCGGGAGCAATCTGGCGGTCAGTAACCCTGAGCTGGATAAACTAATAGCCGCACGCGTTGCTGCATTACGGGCCGCTAACCCGGATGCCAGCGCGAGCGTTCCGGTTGAACTGGTGACGGCATCGGCAAGCGGGCTGGACAATAATATCACCCCGCAAGCGGCGGCCTGGCAAATCCCACGCGTGGCGAAAGCGCGTAATCTCAGCGTTGAACAGCTCACGCAACTGATCGCAAAATACAGCCAACAACCGCTGGTGAAATATATCGGCCAGCCGGTTGTCAACATTGTTGAACTCAATCTGGCGCTGGATAAACTTGATGAATAA", + "dna_sequence_length": 573, + "functions": [ + "potassium translocating ATPase, subunit C" + ], + "id": "CDS_684", + "location": [ + [ + "NC_000913", + 724979, + "-", + 573 + ] + ], + "md5": "92d51efe0cd81835b56b10586d210c0b", + "parent_gene": "", + "protein_md5": "192f33dd0c0de4cce9c54d1a4eec6e68", + "protein_translation": "MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARVAALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVELNLALDKLDE", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002376" + ], + [ + "gene_synonym", + "ECK0685" + ], + [ + "gene_synonym", + "EcoGene:EG10514" + ], + [ + "gene_synonym", + "GI:16128673" + ], + [ + "gene_synonym", + "GeneID:947450" + ], + [ + "gene_synonym", + "JW0685" + ], + [ + "gene_synonym", + "NP_415225.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03960" + ], + [ + "gene_synonym", + "b0697" + ], + [ + "gene_synonym", + "kac" + ], + [ + "gene_synonym", + "kdpB" + ] + ], + "dna_sequence": "ATGAGTCGTAAACAACTGGCGCTATTCGAACCAACACTTGTCGTTCAGGCGCTGAAAGAAGCGGTGAAAAAATTAAACCCGCAGGCGCAATGGCGCAATCCGGTGATGTTTATCGTCTGGATCGGCAGTCTGCTGACCACCTGTATTAGCATCGCGATGGCAAGCGGTGCGATGCCCGGCAATGCGCTGTTTAGCGCGGCCATTAGCGGTTGGCTGTGGATCACCGTACTGTTCGCTAATTTCGCCGAGGCGCTGGCAGAAGGCCGCAGTAAAGCGCAGGCCAACAGTCTGAAAGGGGTGAAAAAAACTGCCTTTGCCCGCAAGCTGCGTGAGCCGAAATATGGCGCTGCGGCGGACAAAGTTCCTGCCGACCAACTTCGTAAAGGCGATATCGTACTGGTAGAAGCTGGCGATATTATCCCCTGCGATGGTGAAGTTATTGAAGGGGGTGCATCGGTCGATGAAAGCGCCATCACCGGGGAATCGGCACCGGTGATCCGTGAATCCGGCGGCGATTTTGCCTCCGTCACCGGCGGCACGCGTATTCTTTCTGACTGGCTGGTGATTGAGTGTAGCGTTAACCCCGGCGAGACATTTCTGGATCGGATGATCGCGATGGTGGAAGGCGCACAGCGACGCAAAACGCCGAACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGGCCGTTTTCCGCGTGGGGCGGTAATGCAGTCAGCGTAACGGTACTGGTGGCGCTGCTGGTCTGTCTGATCCCAACCACTATTGGCGGCCTGTTGTCAGCGATCGGCGTCGCCGGGATGAGCCGGATGCTAGGCGCGAATGTGATTGCCACCAGCGGACGTGCAGTTGAAGCGGCAGGTGACGTTGACGTTCTGCTACTGGATAAAACCGGCACCATCACACTCGGTAACCGTCAGGCGTCGGAGTTTATCCCCGCGCAGGGCGTGGATGAAAAAACGCTGGCTGACGCCGCACAACTGGCTTCGCTGGCTGATGAAACGCCGGAAGGCCGCAGTATTGTGATCCTCGCCAAGCAGCGTTTTAACCTGCGCGAGCGCGATGTGCAGTCGCTCCATGCCACCTTTGTACCGTTTACTGCGCAAAGCCGGATGAGCGGGATCAACATCGACAACCGCATGATCCGTAAAGGTTCTGTCGATGCCATTCGTCGCCATGTTGAGGCTAACGGTGGTCACTTCCCTACCGATGTTGATCAAAAAGTCGATCAGGTTGCGCGTCAGGGAGCCACGCCGCTGGTGGTGGTGGAAGGTTCTCGTGTGCTGGGCGTTATTGCGCTGAAAGATATCGTCAAAGGCGGTATTAAAGAGCGCTTCGCCCAGCTGCGCAAAATGGGCATTAAAACGGTGATGATTACCGGCGATAACCGTCTGACTGCCGCCGCGATTGCTGCGGAAGCGGGTGTCGATGATTTTCTCGCCGAAGCGACACCGGAGGCCAAGCTGGCATTGATCCGTCAGTATCAGGCGGAAGGTCGTTTGGTAGCGATGACCGGCGACGGCACCAACGATGCTCCGGCGCTGGCGCAGGCAGATGTCGCGGTGGCGATGAACTCCGGCACCCAGGCGGCGAAAGAGGCGGGCAATATGGTCGATCTCGACTCTAACCCGACCAAGTTGATCGAGGTGGTGCACATTGGCAAACAGATGCTGATGACCCGTGGCTCGCTGACCACCTTCAGCATTGCCAACGATGTGGCGAAATACTTCGCCATTATTCCGGCGGCATTCGCGGCAACGTATCCGCAGTTAAATGCGCTGAACATCATGTGCCTGCATTCGCCCGACTCCGCAATCCTCAGTGCGGTGATTTTCAACGCCTTGATTATCGTCTTTTTGATTCCCCTGGCGTTAAAAGGCGTGAGTTATAAACCGCTTACCGCTTCTGCCATGTTGCGCCGTAACTTATGGATTTACGGTCTGGGTGGGCTGCTGGTGCCGTTTATCGGTATCAAAGTCATTGATTTACTGCTGACCGTTTGCGGTCTGGTGTGA", + "dna_sequence_length": 2049, + "functions": [ + "potassium translocating ATPase, subunit B" + ], + "id": "CDS_685", + "location": [ + [ + "NC_000913", + 727036, + "-", + 2049 + ] + ], + "md5": "e53781a62965048d9cdc2fecd1d60b3e", + "parent_gene": "", + "protein_md5": "4926094861e21986559455693c9fac74", + "protein_translation": "MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV", + "protein_translation_length": 682, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002381" + ], + [ + "gene_synonym", + "ECK0686" + ], + [ + "gene_synonym", + "EcoGene:EG10513" + ], + [ + "gene_synonym", + "GI:16128674" + ], + [ + "gene_synonym", + "GeneID:946045" + ], + [ + "gene_synonym", + "JW0686" + ], + [ + "gene_synonym", + "NP_415226.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03959" + ], + [ + "gene_synonym", + "b0698" + ], + [ + "gene_synonym", + "kac" + ], + [ + "gene_synonym", + "kdpA" + ] + ], + "dna_sequence": "ATGGCTGCGCAAGGGTTCTTACTGATCGCCACGTTTTTACTGGTGTTAATGGTGCTGGCGCGTCCTTTAGGCAGCGGGCTGGCGCGGCTGATTAATGACATTCCTCTTCCCGGTACAACGGGCGTTGAGCGCGTACTTTTTCGCGCACTTGGCGTCTCTGACCGTGAGATGAACTGGAAGCAATATCTTTGTGCCATTCTCGGCCTGAACATGCTGGGGCTGGCGGTGCTGTTTTTTATGTTGCTCGGTCAGCACTATCTGCCGCTTAATCCACAGCAGTTGCCAGGGCTGTCGTGGGATCTGGCGCTGAATACCGCCGTCAGCTTTGTCACCAATACCAACTGGCAATCTTATAGCGGTGAAACCACGTTGAGCTATTTCAGCCAGATGGCGGGCTTAACGGTGCAAAACTTTCTTTCTGCCGCCAGCGGGATTGCGGTGATTTTTGCCCTCATCCGTGCGTTTACCCGCCAGAGCATGAGCACGCTCGGGAATGCCTGGGTCGATCTGCTACGCATCACGTTATGGGTGCTAGTCCCTGTGGCGTTGTTGATTGCACTGTTTTTTATTCAACAAGGTGCGCTGCAAAACTTTCTGCCTTATCAGGCTGTGAATACCGTTGAAGGAGCGCAACAGCTGTTACCCATGGGGCCTGTAGCTTCTCAGGAAGCGATCAAGATGCTCGGTACTAACGGCGGTGGCTTCTTTAATGCCAACTCGTCGCATCCGTTTGAAAACCCAACCGCACTGACCAACTTCGTGCAGATGCTGGCGATCTTCTTGATCCCAACGGCGCTGTGCTTTGCCTTTGGTGAAGTGATGGGCGATCGCCGCCAGGGGCGCATGTTGCTGTGGGCGATGTCAGTGATTTTTGTCATCTGCGTAGGCGTGGTGATGTGGGCAGAAGTTCAGGGTAATCCTCATCTGCTGGCACTGGGCACGGACAGCAGCATCAATATGGAAGGTAAAGAGAGCCGTTTCGGCGTGCTGGTCAGTAGCCTGTTTGCGGTCGTGACGACGGCGGCTTCCTGTGGCGCGGTGATTGCGATGCATGATTCGTTTACCGCTCTCGGTGGCATGGTGCCGATGTGGCTGATGCAAATTGGTGAAGTGGTGTTCGGCGGTGTCGGTTCTGGTCTTTACGGCATGATGCTGTTTGTCCTGCTGGCGGTGTTTATTGCCGGGCTGATGATTGGTCGTACACCGGAATATCTGGGTAAAAAAATCGACGTACGCGAGATGAAACTGACTGCACTGGCAATTCTGGTTACCCCGACGCTGGTGCTGATGGGCGCGGCGTTGGCGATGATGACCGACGCCGGACGTAGCGCCATGCTCAACCCTGGCCCGCATGGTTTTAGCGAAGTGCTGTACGCCGTGTCATCCGCCGCTAACAACAACGGCAGCGCCTTTGCCGGATTAAGCGCCAACTCTCCGTTCTGGAACTGTTTACTGGCGTTCTGCATGTTTGTCGGTCGCTTCGGGGTGATTATCCCGGTGATGGCAATTGCCGGTTCGCTGGTGAGTAAAAAGAGCCAAGCCGCCAGCTCCGGCACGCTGCCAACGCACGGCCCGCTGTTTGTTGGCCTGTTAATCGGCACCGTGTTGCTGGTTGGCGCACTGACCTTTATCCCTGCCCTGGCGCTTGGTCCGGTGGCGGAATATCTCTCCTGA", + "dna_sequence_length": 1674, + "functions": [ + "potassium translocating ATPase, subunit A" + ], + "id": "CDS_686", + "location": [ + [ + "NC_000913", + 728732, + "-", + 1674 + ] + ], + "md5": "3cda87155dc832b2434c11dd4e371092", + "parent_gene": "", + "protein_md5": "6a28d25bc0738bd887088918baa53d51", + "protein_translation": "MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVMGDRRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGTDSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQAASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS", + "protein_translation_length": 557, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285034" + ], + [ + "gene_synonym", + "ECK0687" + ], + [ + "gene_synonym", + "EcoGene:EG12126" + ], + [ + "gene_synonym", + "GI:94541101" + ], + [ + "gene_synonym", + "GeneID:948946" + ], + [ + "gene_synonym", + "JW0687" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36937" + ], + [ + "gene_synonym", + "YP_588443.1" + ], + [ + "gene_synonym", + "b4513" + ], + [ + "gene_synonym", + "kdpF" + ] + ], + "dna_sequence": "GTGAGTGCAGGCGTGATAACCGGCGTATTGCTGGTGTTTTTATTACTGGGTTATCTGGTTTATGCCCTGATCAATGCGGAGGCGTTCTGA", + "dna_sequence_length": 90, + "functions": [ + "potassium ion accessory transporter subunit" + ], + "id": "CDS_687", + "location": [ + [ + "NC_000913", + 728821, + "-", + 90 + ] + ], + "md5": "a8d6a36ef60eaebd9950bd18c4685203", + "parent_gene": "", + "protein_md5": "f376035c94d52999bbb4d6eb6a8c4bf4", + "protein_translation": "MSAGVITGVLLVFLLLGYLVYALINAEAF", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002386" + ], + [ + "gene_synonym", + "ECK0688" + ], + [ + "gene_synonym", + "EcoGene:EG11521" + ], + [ + "gene_synonym", + "GI:16128675" + ], + [ + "gene_synonym", + "GeneID:947452" + ], + [ + "gene_synonym", + "JW0688" + ], + [ + "gene_synonym", + "NP_415228.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAU2" + ], + [ + "gene_synonym", + "b0699" + ], + [ + "gene_synonym", + "ybfA" + ] + ], + "dna_sequence": "ATGGAACTCTACAGAGAATATCCTGCATGGCTTATCTTTTTACGCCGTACTTATGCGGTTGCAGCGGGCGTTCTGGCGCTGCCTTTCATGCTTTTCTGGAAAGACCGCGCCCGCTTTTACAGCTACCTGCATCGCGTCTGGTCGAAAACCAGCGATAAACCGGTGTGGATGGATCAGGCCGAAAAGGCAACTGGTGATTTTTATTGA", + "dna_sequence_length": 207, + "functions": [ + "DUF2517 family protein" + ], + "id": "CDS_688", + "location": [ + [ + "NC_000913", + 729134, + "+", + 207 + ] + ], + "md5": "19bd5e92afd5e37383d640d4b3e1841e", + "parent_gene": "", + "protein_md5": "6c5a711ba684b1984664e98a5dcacbc4", + "protein_translation": "MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLHRVWSKTSDKPVWMDQAEKATGDFY", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002392" + ], + [ + "gene_synonym", + "ECK0689" + ], + [ + "gene_synonym", + "EcoGene:EG10848" + ], + [ + "gene_synonym", + "GI:16128676" + ], + [ + "gene_synonym", + "GeneID:945306" + ], + [ + "gene_synonym", + "JW0689" + ], + [ + "gene_synonym", + "NP_415229.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16918" + ], + [ + "gene_synonym", + "b0700" + ], + [ + "gene_synonym", + "rhsC" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGGGTGACGTCCGGCCATCCGGTCAATCCGCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGACCGGAAATCTGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGTTACACGTATCAGTATGAGAAGGACCGCATCACCATCACCGACAGCCTGAACCGCCGTGAAGTCCTGCACACGCAGGGTGAAGGCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCGGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTCCGGTTATGTAACCCGCTATGACCATGACCGTTTTGGTCAGGTGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACGCCGCCGGTGACCTGACCACCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAAGCCATCTGTACCACGCAGGGCGGTCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTCGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCGGTATACACGCCGGCGCGAAAAATTCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCACGGAAGGGACAACAGCGTGGTACGCAGAATACGATGAATGGGGTAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAACTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATGGGGGCCAGGTAAAGCAAGTAATGATACAAAAGAAGCTGCTGGCCGTTGTGACCTCGTTGAAACCGATAATAGTTGTGTGGAGAACTGTTTAAAAGGGAAGTTTAAAGAGGTAAGGCCGCGTTATTCTGTATTGCCTGATATATTCACACCTATAAATTTAGGGCTATTTAAAAACTGCCAAGACTGGTCTAATGATTCTTTAGAAACATGTAAGATGAAGTGCTCCGGAAATAACATTGGACGTTTTATTAGATTTGTATTCACCGGAGTGATGTAA", + "dna_sequence_length": 4194, + "functions": [ + "Rhs protein with putative toxin domain", + "putative neighboring cell growth inhibitor" + ], + "id": "CDS_689", + "location": [ + [ + "NC_000913", + 729583, + "+", + 4194 + ] + ], + "md5": "3436ddf526402c0687cdfcaf6ef83c33", + "parent_gene": "", + "protein_md5": "822fd4ce2993fd713751c79fe414f933", + "protein_translation": "MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEICYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAICTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAERWQYDERGWLTDISHISEGHRVTVHYGYDSKGRLASEHLTVHHPQTNELLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLSGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYTTDPAGNRLPDPELHPDSALSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHRGLPLALISTEGTTAWYAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGTGERSGPDIWGNPFYHQYLCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAGRCDLVETDNSCVENCLKGKFKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKMKCSGNNIGRFIRFVFTGVM", + "protein_translation_length": 1397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002398" + ], + [ + "gene_synonym", + "ECK0690" + ], + [ + "gene_synonym", + "EcoGene:EG11522" + ], + [ + "gene_synonym", + "GI:16128677" + ], + [ + "gene_synonym", + "GeneID:947566" + ], + [ + "gene_synonym", + "JW0691" + ], + [ + "gene_synonym", + "NP_415230.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAU5" + ], + [ + "gene_synonym", + "b0702" + ], + [ + "gene_synonym", + "ybfB" + ] + ], + "dna_sequence": "ATGAAATATATTATTTTTTTATTCAGAGCTATATGGCTGGCTTTATCGCTTTTAATACTATTCTTTTCCATGCATAGACTTTCACTATTAGACTCCACTCGTGATGTGAGCGAGTTAATTAGTCTCATGTCTTATGGAATGATGGTAATATGTTTTCCAACAGGCATAGTATTCTTTATTGCTCTAATATTTATAGGGACTGTATCAGACATTATTGGCGTAAGGATTGATAGTAAGTATATTATGGCGATAATAATATGGCTTTATTTTCTGTCAGGAGGGTATATTCAATGGTTTGTATTAAGTAAGCGCATTATAAACAAATAA", + "dna_sequence_length": 327, + "functions": [ + "putative membrane protein" + ], + "id": "CDS_690", + "location": [ + [ + "NC_000913", + 733776, + "+", + 327 + ] + ], + "md5": "80f00631bb8a5dde6f3440049ad2df6b", + "parent_gene": "", + "protein_md5": "8f5384fdddf235412fa0e27f1a83636c", + "protein_translation": "MKYIIFLFRAIWLALSLLILFFSMHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMAIIIWLYFLSGGYIQWFVLSKRIINK", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002402" + ], + [ + "gene_synonym", + "ECK0691" + ], + [ + "gene_synonym", + "EcoGene:EG13661" + ], + [ + "gene_synonym", + "GeneID:946124" + ], + [ + "gene_synonym", + "JW0692" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77779" + ], + [ + "gene_synonym", + "b0703" + ], + [ + "gene_synonym", + "rhsO" + ], + [ + "gene_synonym", + "ybfO" + ] + ], + "dna_sequence": "AACCTGGGCATTGATATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACGGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGCCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGACGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGATTCAATGGGACTGGCATCAAAATATGGACACTTAAATAATGGCGGATATGGAGCGAGACCCAACAAACCGCCTACGCCCGATCCAAGTAAATTGCCGGACATAGCGAAACAATTAAGACTGCCATATCCTATTGACCAGGCCAGTAGTGCGCCTAATGTTTTCAAAACATTCTTCAGAGCATTAAGCCCTTACGACTACACACTGTATTGCAGGAAGTGGGTAAAACCAAATCTGACTTGTACGCCACAGGATGATTCCCAGTATCCAGGGATGGATACAAAGACAGCAAGTGATTACCTGCCACAGACAAATTGGCCAACAACTCAATTACCACCAGGATATACTTGTGCAGAACCCTATTTATTCCCAGACATTAATAAACCCGATGGGCCAGCAACAGCAGGGATAGATGATTTGGGTGAAATTTTAGCTAAGATGAAACAGAGAACATCGAGAGGAATAAGAAAATGA", + "dna_sequence_length": 1521, + "id": "CDS_691", + "location": [ + [ + "NC_000913", + 734133, + "+", + 1521 + ] + ], + "md5": "4cde809d831b3530f6f8e1d92ddb9cc7", + "parent_gene": "", + "protein_md5": "62ea38b1769dc8236aa4e749fbc4eac4", + "protein_translation": "NLGIDIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002404" + ], + [ + "gene_synonym", + "ECK0692" + ], + [ + "gene_synonym", + "EcoGene:EG11523" + ], + [ + "gene_synonym", + "GI:16128679" + ], + [ + "gene_synonym", + "GeneID:947288" + ], + [ + "gene_synonym", + "JW0693" + ], + [ + "gene_synonym", + "NP_415232.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28915" + ], + [ + "gene_synonym", + "b0704" + ], + [ + "gene_synonym", + "ybfC" + ] + ], + "dna_sequence": "ATGAAAAGAGTTTTGTTCTTTTTGCTGATGATATTTGTTAGTTTTGGTGTTATAGCTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGGGGCGAGACTCTTAATTCGCGTCGGGTCACTACGCCTTAATGAAAATCATGCCATCAAAGGAACGTTGCAGGAGTTGATAAATACAGCAGAAAAAACGGCGTTTCTCGGCGATCGGTTTAGAAGTTATATAAGAGCGGGTATCTATCAAAAAAAGAGCAGTGATCCAGTTCAGTTGTTGGCAGTCCTTGATAATTCAATCATGGTAAAATATTTTAAAGATGAGAAACCAACTTATGCTCGAATGACAGCACATCTCCCGAACAAAAATGAGTCTTACGAATGTTTAATAAAGATACAGCATGAACTAATTCGTAGTGAAGAGAAATAA", + "dna_sequence_length": 570, + "functions": [ + "putative secreted protein" + ], + "id": "CDS_692", + "location": [ + [ + "NC_000913", + 735650, + "+", + 570 + ] + ], + "md5": "a486ac8cc8ed7e9bddfe379f027b5b54", + "parent_gene": "", + "protein_md5": "1faa7440a663fd88db17677638dff039", + "protein_translation": "MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQHELIRSEEK", + "protein_translation_length": 189, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285035" + ], + [ + "gene_synonym", + "ECK4474" + ], + [ + "gene_synonym", + "EcoGene:EG14419" + ], + [ + "gene_synonym", + "GeneID:1450245" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEQ8" + ], + [ + "gene_synonym", + "b4514" + ], + [ + "gene_synonym", + "ybfQ" + ] + ], + "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTACACCCGATTACAGACAAGCCTGGAAAGTGGTGCATAAATTGTCAGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTCGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCCAG", + "dna_sequence_length": 240, + "id": "CDS_693", + "location": [ + [ + "NC_000913", + 736445, + "+", + 240 + ] + ], + "md5": "0c6b1261e7623e4b209eacc89da9b7b2", + "parent_gene": "", + "protein_md5": "fc82b083ae31bdd025e8382e1504079b", + "protein_translation": "MELKKLMEHISITPDYRQAWKVVHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSQ", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002407" + ], + [ + "gene_synonym", + "ECK0694" + ], + [ + "gene_synonym", + "EcoGene:EG13417" + ], + [ + "gene_synonym", + "GeneID:947075" + ], + [ + "gene_synonym", + "JW0695" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75741" + ], + [ + "gene_synonym", + "b0705" + ], + [ + "gene_synonym", + "ybfL" + ] + ], + "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGATAAGCCTGGAAAGTAGAGCATAAATTGTCAGGCATCCTACTATTGACTATTTTTGCCGTTATTTCTGGTGCAGAAAGTTGGGAAGATATAGAGGATTTCGGGGAAACACATCTCGATTTCTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACTATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGCCATTCATCAAATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGGCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCAATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCAGAAAAGTTCGCCACAGCAATCCGAAACCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAACGCCGCAGAATTATTTTCAGGGATACGGCACATCGCTATTAATATTTTAACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGATAGAAACTATCTCGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAA", + "dna_sequence_length": 1137, + "id": "CDS_694", + "location": [ + [ + "NC_000913", + 736825, + "+", + 1137 + ] + ], + "md5": "a66612dd1ab98fed8eebc1667b49b8f9", + "parent_gene": "", + "protein_md5": "0eb60dfe271d176abda22bdacb0bc0ae", + "protein_translation": "MELKKLMEHISIIPDYR", + "protein_translation_length": 17, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002411" + ], + [ + "gene_synonym", + "ECK0695" + ], + [ + "gene_synonym", + "EcoGene:EG11524" + ], + [ + "gene_synonym", + "GI:16128681" + ], + [ + "gene_synonym", + "GeneID:945176" + ], + [ + "gene_synonym", + "JW0696" + ], + [ + "gene_synonym", + "NP_415234.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28916" + ], + [ + "gene_synonym", + "b0706" + ], + [ + "gene_synonym", + "ybfD" + ] + ], + "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCTGTATCTGTCCTGCGAAATTTCATGAGAGCTTTATTAACTGGATGCTTGACTACCATTCTTCAGATGATAAAGACGTCATCGCAATTGATGGAAAAATACACCGGCATTCTTATGACAAGAGTCGCCGTAAGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCAAAACCGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTAAATAAAGCCTTCGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAG", + "dna_sequence_length": 762, + "functions": [ + "H repeat-associated putative transposase" + ], + "id": "CDS_695", + "location": [ + [ + "NC_000913", + 738092, + "+", + 762 + ] + ], + "md5": "da933548c2f0a7e658fefc49ff37f448", + "parent_gene": "", + "protein_md5": "dc5db9bfbf141178375c276cbb923c91", + "protein_translation": "MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDDKDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002414" + ], + [ + "gene_synonym", + "ECK0696" + ], + [ + "gene_synonym", + "EcoGene:EG11108" + ], + [ + "gene_synonym", + "GI:16128682" + ], + [ + "gene_synonym", + "GeneID:944853" + ], + [ + "gene_synonym", + "JW0697" + ], + [ + "gene_synonym", + "NP_415235.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24252" + ], + [ + "gene_synonym", + "b0707" + ], + [ + "gene_synonym", + "tkp" + ], + [ + "gene_synonym", + "ybgA" + ] + ], + "dna_sequence": "ATGAATCTACAACGATTTGATGACAGCACCCTAATCCGTATCTTTGCCCTTCATGAGTTACATCGACTGAAAGAACATGGCTTAACGCGCGGGGCGCTTCTCGATTATCACAGCCGCTATAAACTCGTCTTTCTGGCGCATTCTCAGCCGGAGTACCGCAAACTTGGCCCGTTCGTGGCTGATATTCACCAGTGGCAAAATCTGGATGACTATTACAACCAGTACCGCCAACGCGTAGTTGTTTTGCTTTCTCACCCCGCCAACCCGCGCGATCACACCAATGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATATTGATTCCACAGAACGCCAGCAGCTGGCTGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCACTTCTTGCGCCGCTGATGCGTATCAAACACTATATGGCGCTTTATCCTGACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTGATTAACTTGCGCCATTCAGGAGTTTTATGA", + "dna_sequence_length": 510, + "functions": [ + "DUF1722 family protein" + ], + "id": "CDS_696", + "location": [ + [ + "NC_000913", + 739001, + "+", + 510 + ] + ], + "md5": "5b1f6c32fc02a2d31f9149770ae7cc46", + "parent_gene": "", + "protein_md5": "b65c20eb9d1634ad2d5c0cc0620c171e", + "protein_translation": "MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002417" + ], + [ + "gene_synonym", + "ECK0697" + ], + [ + "gene_synonym", + "EcoGene:EG10736" + ], + [ + "gene_synonym", + "GI:16128683" + ], + [ + "gene_synonym", + "GeneID:947005" + ], + [ + "gene_synonym", + "JW0698" + ], + [ + "gene_synonym", + "NP_415236.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00914" + ], + [ + "gene_synonym", + "b0708" + ], + [ + "gene_synonym", + "phr" + ], + [ + "gene_synonym", + "phrB" + ] + ], + "dna_sequence": "ATGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGTGATGACCGGTAATCACGAGATGTACAAAGTCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGGCAGCCAATAACGGTGGCTGGCAGTGGGCCGCTTCAACCGGAACCGATGCAGCGCCGTATTTTCGTATTTTCAACCCGACAACCCAGGGCGAGAAATTTGATCATGAGGGCGAGTTTATCCGCCAGTGGCTACCGGAACTGCGCGATGTGCCAGGGAAAGTGGTGCATGAGCCGTGGAAGTGGGCGCAGAAAGCAGGTGTGACGCTGGATTATCCGCAACCGATAGTCGAGCACAAAGAAGCGAGAGTACAAACGTTGGCAGCGTATGAGGCGGCGCGGAAGGGGAAATAA", + "dna_sequence_length": 1419, + "functions": [ + "deoxyribodipyrimidine photolyase, FAD-binding" + ], + "id": "CDS_697", + "location": [ + [ + "NC_000913", + 739507, + "+", + 1419 + ] + ], + "md5": "c9be007957824011798eb0d5b47f96f7", + "parent_gene": "", + "protein_md5": "19085ec80e0f0fd2b358263d819b8ddf", + "protein_translation": "MTTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQKAGVTLDYPQPIVEHKEARVQTLAAYEAARKGK", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002420" + ], + [ + "gene_synonym", + "ECK0698" + ], + [ + "gene_synonym", + "EcoGene:EG13304" + ], + [ + "gene_synonym", + "GI:16128684" + ], + [ + "gene_synonym", + "GeneID:947368" + ], + [ + "gene_synonym", + "JW0699" + ], + [ + "gene_synonym", + "NP_415237.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75742" + ], + [ + "gene_synonym", + "b0709" + ], + [ + "gene_synonym", + "dtpD" + ], + [ + "gene_synonym", + "ybgH" + ] + ], + "dna_sequence": "ATGAATAAACACGCATCACAGCCGCGCGCTATTTACTATGTCGTTGCGCTGCAAATCTGGGAATATTTTAGCTTTTACGGCATGCGTGCCCTGCTGATTCTCTATCTCACCAATCAACTAAAATACAACGATACTCACGCCTACGAGTTATTTAGCGCCTACTGTTCGCTGGTGTATGTCACGCCAATCCTCGGTGGCTTTTTGGCGGATAAAGTTCTCGGCAATCGCATGGCGGTGATGCTGGGGGCGTTGTTGATGGCGATCGGTCATGTGGTGCTGGGTGCCAGTGAGATCCATCCGTCATTCCTCTATCTGTCCCTGGCGATTATCGTCTGCGGCTATGGCCTGTTTAAATCTAACGTAAGCTGTCTGCTCGGCGAGCTGTATGAGCCAACCGATCCGCGTCGTGATGGCGGTTTCTCGCTGATGTATGCGGCGGGTAACGTGGGGTCTATTATCGCACCTATCGCCTGTGGTTACGCCCAGGAAGAGTACAGCTGGGCGATGGGCTTTGGCCTGGCGGCGGTTGGCATGATCGCGGGTCTGGTCATTTTCTTATGTGGCAATCGTCATTTCACTCATACCCGCGGCGTTAACAAAAAAGTACTGCGTGCGACAAACTTTCTCCTGCCGAACTGGGGATGGCTGCTGGTTCTGCTGGTGGCAACGCCTGCACTGATTACCATACTGTTCTGGAAAGAGTGGTCGGTATACGCCTTAATTGTCGCGACTATTATTGGCCTGGGTGTACTGGCAAAAATTTATCGCAAAGCAGAAAACCAGAAACAGCGGAAGGAGCTGGGGCTGATTGTGACGCTCACCTTCTTCAGTATGTTGTTCTGGGCCTTCGCACAACAGGGCGGTAGCTCGATTAGCCTTTATATCGACCGCTTCGTTAACCGCGATATGTTTGGTTATACCGTTCCGACCGCGATGTTCCAGTCGATTAATGCCTTCGCAGTTATGCTGTGCGGTGTGTTCCTGGCGTGGGTGGTAAAAGAGAGTGTCGCGGGTAATCGTACCGTGCGCATCTGGGGGAAATTTGCTCTTGGCCTTGGCCTGATGAGCGCCGGATTCTGCATTCTGACCTTAAGCGCCCGCTGGTCCGCAATGTATGGTCACTCTTCTCTGCCACTGATGGTATTAGGCCTGGCGGTGATGGGCTTTGCGGAACTGTTTATCGACCCGGTTGCCATGTCGCAAATTACGCGCATTGAAATCCCCGGTGTGACCGGCGTATTAACCGGCATCTACATGCTGCTTTCTGGCGCGATCGCGAACTATCTGGCGGGCGTGATTGCCGATCAGACATCGCAGGCTTCGTTTGATGCTTCCGGGGCGATCAACTACTCCATCAATGCATATATTGAAGTATTTGATCAAATTACCTGGGGCGCACTGGCGTGTGTAGGACTGGTACTGATGATTTGGCTGTATCAGGCGCTGAAATTCAGAAACCGCGCGCTGGCGCTGGAGTCTTAA", + "dna_sequence_length": 1482, + "functions": [ + "dipeptide and tripeptide permease D" + ], + "id": "CDS_698", + "location": [ + [ + "NC_000913", + 742556, + "-", + 1482 + ] + ], + "md5": "454b66d558658c38a448d35bf2b854ba", + "parent_gene": "", + "protein_md5": "2dcd81bb8bc7273f9c8051241c2ef1dd", + "protein_translation": "MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITILFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES", + "protein_translation_length": 493, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002424" + ], + [ + "gene_synonym", + "ECK0699" + ], + [ + "gene_synonym", + "EcoGene:EG13305" + ], + [ + "gene_synonym", + "GI:16128685" + ], + [ + "gene_synonym", + "GeneID:945824" + ], + [ + "gene_synonym", + "JW0700" + ], + [ + "gene_synonym", + "NP_415238.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP6" + ], + [ + "gene_synonym", + "b0710" + ], + [ + "gene_synonym", + "ybgI" + ] + ], + "dna_sequence": "ATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTACGCGCCGAATGGTTTGCAGGTGGAAGGCAAAGAGACGGTGCAAAAAATTGTTACCGGTGTCACCGCCAGCCAGGCTTTGCTCGATGAGGCAGTGCGTCTGGGCGCGGATGCGGTCATTGTGCATCATGGCTACTTCTGGAAAGGAGAGTCTCCGGTCATTCGCGGAATGAAGCGTAACCGTTTAAAAACGTTGCTGGCGAATGATATCAACCTGTATGGCTGGCATTTGCCGCTTGACGCACATCCTGAGCTGGGCAATAACGCACAGCTGGCGGCGTTACTGGGGATCACGGTCATGGGCGAAATTGAGCCGTTGGTGCCGTGGGGCGAACTGACCATGCCTGTGCCGGGACTGGAGCTGGCTTCCTGGATTGAAGCGCGTCTGGGACGTAAGCCGTTATGGTGTGGCGATACCGGACCTGAGGTGGTCCAGCGCGTCGCCTGGTGCACGGGCGGCGGGCAAAGTTTTATCGATAGCGCCGCGCGTTTTGGCGTGGATGCTTTTATTACTGGCGAAGTTTCTGAACAGACCATTCATTCAGCCCGCGAGCAGGGATTGCATTTTTATGCTGCAGGTCACCATGCCACTGAACGTGGTGGTATTCGCGCATTGAGCGAGTGGCTGAATGAAAATACCGATCTTGATGTGACCTTTATTGATATTCCTAATCCTGCATAA", + "dna_sequence_length": 744, + "functions": [ + "NIF3 family metal-binding protein" + ], + "id": "CDS_699", + "location": [ + [ + "NC_000913", + 742827, + "+", + 744 + ] + ], + "md5": "e497534b94c87d0e840658df8fdb79f1", + "parent_gene": "", + "protein_md5": "1f8e5f6ccb931658a7d0407519b276a7", + "protein_translation": "MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002426" + ], + [ + "gene_synonym", + "ECK0700" + ], + [ + "gene_synonym", + "EcoGene:EG13306" + ], + [ + "gene_synonym", + "GI:16128686" + ], + [ + "gene_synonym", + "GeneID:945311" + ], + [ + "gene_synonym", + "JW0701" + ], + [ + "gene_synonym", + "NP_415239.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV4" + ], + [ + "gene_synonym", + "b0711" + ], + [ + "gene_synonym", + "ybgJ" + ] + ], + "dna_sequence": "GTGCAACGAGCGCGTTGTTATCTGATAGGTGAAACGGCGGTAGTGCTGGAACTGGAACCGCCGGTGACGCTGGCTAGCCAGAAACGGATCTGGCGACTGGCGCAGCGTCTGGTGGATATGCCGAATGTGGTTGAAGCCATTCCCGGCATGAACAATATCACGGTGATTTTGCGTAATCCTGAGTCGCTGGCGCTGGATGCCATAGAGCGTTTGCAACGCTGGTGGGAGGAGAGCGAGGCGCTGGAGCCGGAGTCTCGCTTTATTGAAATTCCGGTGGTTTACGGTGGTGCAGGCGGACCGGATTTGGCGGTGGTCGCGGCGCATTGCGGGTTGAGCGAAAAACAGGTTGTTGAATTGCACTCCTCCGTGGAATACGTGGTCTGGTTTTTAGGTTTTCAACCGGGCTTCCCGTATCTCGGGAGTTTGCCGGAACAACTACACACGCCACGGCGCGCTGAACCGCGCTTACTCGTTCCGGCAGGTTCTGTCGGGATCGGCGGGCCGCAGACTGGTGTTTATCCGCTGGCAACGCCGGGTGGCTGGCAGTTGATTGGTCATACCTCACTCAGCCTGTTTGATCCGGCGCGTGACGAACCCATCTTATTACGTCCGGGAGACAGCGTGCGCTTTGTACCGCAGAAGGAGGGAGTATGCTGA", + "dna_sequence_length": 657, + "functions": [ + "putative allophanate hydrolase, subunit 1" + ], + "id": "CDS_700", + "location": [ + [ + "NC_000913", + 743593, + "+", + 657 + ] + ], + "md5": "041cf887464f321fcf9e47bd695bc986", + "parent_gene": "", + "protein_md5": "580e1ef1946abc3711a8ef7691ba69ee", + "protein_translation": "MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002428" + ], + [ + "gene_synonym", + "ECK0701" + ], + [ + "gene_synonym", + "EcoGene:EG13307" + ], + [ + "gene_synonym", + "GI:16128687" + ], + [ + "gene_synonym", + "GeneID:945317" + ], + [ + "gene_synonym", + "JW0702" + ], + [ + "gene_synonym", + "NP_415240.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75745" + ], + [ + "gene_synonym", + "b0712" + ], + [ + "gene_synonym", + "ybgK" + ] + ], + "dna_sequence": "ATGCTGAAGATTATTCGTGCGGGCATGTATACCACTGTGCAGGATGGCGGTCGTCACGGTTTTCGCCAGTCGGGTATCAGCCACTGCGGCGCACTGGATATGCCCGCGTTACGCATTGCTAACCTACTGGTGGGTAATGACGCCAATGCCCCCGCGCTGGAGATCACGCTCGGTCAGTTAACTGTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAAATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCTGTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCTATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTTGATGAACGACGCACAGACCACCGGTGGTTACCCGCGTATTGCCTGTATCATTGAGGCTGATATGTACCATCTGGCGCAAATTCCGCTCGGTCAGCCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGA", + "dna_sequence_length": 933, + "functions": [ + "putative allophanate hydrolase, subunit 2" + ], + "id": "CDS_701", + "location": [ + [ + "NC_000913", + 744243, + "+", + 933 + ] + ], + "md5": "609f4696c86febce6d1fd0c87af20f9c", + "parent_gene": "", + "protein_md5": "63b88daac06c583ed8cb43c128eed24b", + "protein_translation": "MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMRSYLAVAGGIDVPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKSKRDSMEAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKRTTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002431" + ], + [ + "gene_synonym", + "ECK0702" + ], + [ + "gene_synonym", + "EcoGene:EG13308" + ], + [ + "gene_synonym", + "GI:16128688" + ], + [ + "gene_synonym", + "GeneID:945318" + ], + [ + "gene_synonym", + "JW0703" + ], + [ + "gene_synonym", + "NP_415241.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75746" + ], + [ + "gene_synonym", + "b0713" + ], + [ + "gene_synonym", + "ybgL" + ] + ], + "dna_sequence": "ATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAGCTATTAACGCTGGTTTCCTCTGCCAATATTGCCTGTGGATTTCATGCAGGCGATGCGCAAATCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAATGGTGTCGCGATTGGCGCTCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTACGCCCAGACGCTGTATCAAATTGGCGCGCTGGCAACGATTGCCCGTGCGCAAGGCGGCGTAATGCGTCATGTCAAACCGCACGGCATGTTGTACAACCAGGCGGCGAAAGAAGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCAGCATTGATTCTCGTCGGGCTGGCGGGAAGCGAGCTGATTCGTGCAGGCAAGCAATATGGTCTGACAACGCGCGAGGAAGTGTTTGCCGATCGCGGTTATCAGGCTGACGGCTCGCTGGTGCCGCGAAGCCAGTCAGGCGCGTTGATTGAAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAA", + "dna_sequence_length": 735, + "functions": [ + "UPF0271 family protein" + ], + "id": "CDS_702", + "location": [ + [ + "NC_000913", + 745165, + "+", + 735 + ] + ], + "md5": "de8b4f312f8d882f36dd23d7e3801cb8", + "parent_gene": "", + "protein_md5": "1f63a13deed1d14ee47d782b2455d089", + "protein_translation": "MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIMQACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVFADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLHGDGEHALAFARRLRSAFAEKGIVVAA", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002433" + ], + [ + "gene_synonym", + "ECK0703" + ], + [ + "gene_synonym", + "EcoGene:EG13237" + ], + [ + "gene_synonym", + "GI:16128689" + ], + [ + "gene_synonym", + "GeneID:945320" + ], + [ + "gene_synonym", + "JW0704" + ], + [ + "gene_synonym", + "NP_415242.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P50465" + ], + [ + "gene_synonym", + "b0714" + ], + [ + "gene_synonym", + "nei" + ] + ], + "dna_sequence": "ATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCCCGCAGTTAAAACCTTATCAATCACAACTTATCGGTCAACACGTTACCCATGTGGAAACGCGTGGTAAGGCGTTGTTAACTCATTTTTCCAACGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAACTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTACTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACACGCGTTACTGGAGATTCCTCGATTTTCCTACGCTACGCGGGGGCAGGTGGATGAGAATAAGCATCATGGGGCGCTGTTTCGCTTTAAGGTTTTTCATCGAGATGGCGAACCGTGCGAACGTTGTGGCAGCATCATTGAGAAAACCACGCTGTCATCTCGCCCGTTTTACTGGTGCCCTGGCTGCCAGCACTAG", + "dna_sequence_length": 792, + "functions": [ + "endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase" + ], + "id": "CDS_703", + "location": [ + [ + "NC_000913", + 745935, + "+", + 792 + ] + ], + "md5": "0dc085370e7aa4177783b741f64c5c41", + "parent_gene": "", + "protein_md5": "8d4f5fd2e953748336a91be9d21b88fb", + "protein_translation": "MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGCQH", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002435" + ], + [ + "gene_synonym", + "ECK0704" + ], + [ + "gene_synonym", + "EcoGene:EG13310" + ], + [ + "gene_synonym", + "GI:90111163" + ], + [ + "gene_synonym", + "GeneID:945321" + ], + [ + "gene_synonym", + "JW5097" + ], + [ + "gene_synonym", + "NP_415243.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75747" + ], + [ + "gene_synonym", + "abrB" + ], + [ + "gene_synonym", + "b0715" + ], + [ + "gene_synonym", + "ybgN" + ] + ], + "dna_sequence": "ATGCCAGTTTTGCAGTGGGGAATGTTATGTGTGCTATCACTTCTCCTTTCTATTGGTTTCCTCGCGGTACATCTCCCGGCGGCGCTATTACTTGGGCCGATGATCGCCGGGATCATCTTTAGTATGCGCGGAATTACTCTGCAACTTCCCCGCTCTGCTTTTCTCGCCGCCCAGGCCATTCTTGGCTGCATGATTGCGCAAAACCTCACTGGTTCGATTCTCACCACCCTGGCCGTCAACTGGCCGATCGTGCTTGCAATTTTACTGGTAACGCTGCTTTCCAGCGCCATTGTGGGTTGGTTATTGGTGCGCTATAGCTCATTGCCTGGAAATACCGGTGCCTGGGGCTCCTCTCCTGGCGGCGCGGCGGCAATGGTCGCTATGGCGCAAGATTACGGCGCAGATATTCGCCTGGTGGCGTTTATGCAATATCTGCGAGTGCTGTTCGTCGCGGGGGCCGCTGTTCTGGTCACCCGCATGATGCTGGGCGATAACGCTGAAGCGGTTAACCAGCATATCGTCTGGTTCCCGCCAGTGAGCATTAATCTCCTGCTTACTATTTTGCTCGCGGTCGTTGCCGGTACAGTGGGATGCCTGCTGCGTCTTCCTTCCGGCACGATGCTCATCCCGATGCTGGCGGGCGCAGTGCTCCAGTCTGGTCAGCTCATCACCATCGAACTACCGGAATGGCTGCTGGCGATGGCGTATATGGCAATTGGCTGGCGGATTGGTCTTGGTTTCGATAAACAAATCTTACTGCGGGCACTACGCCCGCTACCGCAAATCCTGCTGTCGATTTTTGCTCTGCTGGCTATTTGTGCGGGTATGGCGTGGGGGCTGACCCGGTTTATGCACATTGATTTTATGACTGCCTACCTCGCCACCAGCCCCGGCGGGCTTGATACCGTGGCGGTCATCGCCGCAGGGAGCAATGCCGATATGGCGCTCATTATGGCGATGCAAACCCTACGCCTGTTCAGTATTTTGCTGACAGGGCCTGCCATTGCGCGGTTTATTTCAACCTATGCGCCGAAGCGGTCGGCCTAG", + "dna_sequence_length": 1047, + "functions": [ + "regulator of aidB expression", + "inner membrane protein" + ], + "id": "CDS_704", + "location": [ + [ + "NC_000913", + 747769, + "-", + 1047 + ] + ], + "md5": "15796b745a47e8d419747eb7925199d8", + "parent_gene": "", + "protein_md5": "62c6455739d07815e05913c263be8b60", + "protein_translation": "MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002441" + ], + [ + "gene_synonym", + "ECK0705" + ], + [ + "gene_synonym", + "EcoGene:EG13311" + ], + [ + "gene_synonym", + "GI:90111164" + ], + [ + "gene_synonym", + "GeneID:947550" + ], + [ + "gene_synonym", + "JW5098" + ], + [ + "gene_synonym", + "NP_415244.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75748" + ], + [ + "gene_synonym", + "b0716" + ], + [ + "gene_synonym", + "ybgO" + ] + ], + "dna_sequence": "ATGAGTGCTGGCAAGGGATTGTTGCTCGTCATCTGCCTGTTATTTCTGCCGTTGAAGTCTGCAATGGCGCTGAACTGCTATTTTGGTACATCTGGTGGCGCAGTAGAAAAATCAGAAGCGATTCAACCGTTTGCTGTACCAGGCAATGCCAAACCCGGTGATAAGATCTGGGAATCTGACGATATTAAAATTCCCGTCTATTGTGACAACAATACCAACGGCAACTTTGAAAGCGAGCATGTCTACGCCTGGGTAAACCCCTATCCGGGGGTGCAGGATCGTTATTATCAACTCGGCGTGACATACAACGGTGTCGATTACGATGCCAGTCTGGGAAAAAGTCGCATCGACACTAACCAGTGTATCGACAGTAAGAACATTGATATTTATACCCCTGAGCAGATCATCGCGATGGGATGGCAGAACAAAATTTGCTCGGGCGATCCCGCTAATATTCATATGTCGCGTACCTTTCTCGCTCGCATGCGGTTATACGTCAAAATACGAGAAATGCCGCCGCATGATTATCAAAGTACGCTTAGCGACTATATCGTCGTGCAATTTGACGGTGCCGGTAGCGTTAACGAAGACCCTACTGCCCAAAACCTGAAATATCATATTACTGGTCTGGAAAACATTCGCGTGCTGGATTGCAGCGTCAATTTTTCCATTTCACCGGAAACACAGGTGATTGATTTTGGTAAATTTAATTTGCTGGATATACGTCGCCACACAATGTCGAAAACGTTCAGTATTAAAACGACCAAGAGCCAAAACGATCAATGCACCGACGGATTTAAAGTCAGTTCCTCCTTTTATACCGAAGAAACGTTGGTTGAAGAAGATAAAGCATTGTTGATTGGTAATGGTCTGAAGCTACGTTTACTGGATGAAAACGCCTCGCCTTATACCTTCAATAAATATGCTGAATACGCCGATTTCACCAGTGACATGTTGGTCTACGAAAAAACCTATACGGCTGAACTTTCGTCCATTCCAGGCACCCCCATCGAGGCTGGCCCCTTCGATACAGTGGTGCTTTTTAAGATTAACTATAACTGA", + "dna_sequence_length": 1062, + "functions": [ + "putative fimbrial protein" + ], + "id": "CDS_705", + "location": [ + [ + "NC_000913", + 748982, + "-", + 1062 + ] + ], + "md5": "fe4321c87f0fea4a18a3f30fc2262788", + "parent_gene": "", + "protein_md5": "9566b8f3a0a026d643af5844c71f5d96", + "protein_translation": "MSAGKGLLLVICLLFLPLKSAMALNCYFGTSGGAVEKSEAIQPFAVPGNAKPGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDASLGKSRIDTNQCIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLARMRLYVKIREMPPHDYQSTLSDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDCSVNFSISPETQVIDFGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEETLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLVYEKTYTAELSSIPGTPIEAGPFDTVVLFKINYN", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002443" + ], + [ + "gene_synonym", + "ECK0706" + ], + [ + "gene_synonym", + "EcoGene:EG13312" + ], + [ + "gene_synonym", + "GI:16128692" + ], + [ + "gene_synonym", + "GeneID:945110" + ], + [ + "gene_synonym", + "JW0707" + ], + [ + "gene_synonym", + "NP_415245.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75749" + ], + [ + "gene_synonym", + "b0717" + ], + [ + "gene_synonym", + "ybgP" + ] + ], + "dna_sequence": "ATGACATTTATTAAAGGATTACCCTTAATGTTGTTAACCATCAGCTTGGGTTGCAATGCTGCGGTGCAACCCGATCGCACACGCATTGTGTTTAACGCCAATGACAAAGCCACCAGCCTGCGTATCGAAAACCAAAGTGACAAACTGCCTTATCTTGCTTATTCCTGGATAGAAAATGAAAAAGGGGAGAAAAGCGATGCTCTTCTGGTCGCTTTGCCCCCTATTCAACGTCTGGAACCGAAAGCGACATCGCAGGTGCGGGTTGTGAAACAAGCCTCAACCACACAATTACCTGGCGATCGCGAAACGCTATTTTTCTACAATATGCGCGAAATTCCTCCCGCTCCGGATAAAAGCAGCGACCATGCGATACTTCAGGTCGCTATTCAAAGTCGTATTAAATTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGCAACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTATCTGGGGAGAAATGAAAAAGGCGTTCTCCCAGGCTTCAAAACCGTGATGGTTGCACCTTTTAGTACGGTCAACACAAACACCGGAAGTTATAGCGGCAGCCAGTTTTATCTCGGTTACATGGATGATTACGGCGCATTACGCATGACGACGCTCAACTGCAGCGGACAATGCCGTTTACAAGCAGTGGAGGCGAAATGA", + "dna_sequence_length": 729, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_706", + "location": [ + [ + "NC_000913", + 749707, + "-", + 729 + ] + ], + "md5": "7f608668f962fb7d3ab0ca2fef572047", + "parent_gene": "", + "protein_md5": "225ab6496bd63862595a1bb554914683", + "protein_translation": "MTFIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSGQCRLQAVEAK", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002446" + ], + [ + "gene_synonym", + "ECK0707" + ], + [ + "gene_synonym", + "EcoGene:EG13313" + ], + [ + "gene_synonym", + "GI:90111165" + ], + [ + "gene_synonym", + "GeneID:946537" + ], + [ + "gene_synonym", + "JW5099" + ], + [ + "gene_synonym", + "NP_415246.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75750" + ], + [ + "gene_synonym", + "b0718" + ], + [ + "gene_synonym", + "ybgQ" + ] + ], + "dna_sequence": "GTGAATATTTATCGACTCTCTTTTGTATCCTGCCTGGTCATGGCGATGCCTTGCGCAATGGCGGTCGAATTCAATCTGAATGTTCTCGATAAATCAATGCGCGACCGCATTGATATTTCATTATTAAAGGAAAAAGGAGTCATTGCTCCCGGTGAATATTTTGTTAGCGTTGCGGTGAATAACAACAAAATCAGTAATGGGCAAAAAATTAACTGGCAAAAAAAGGGTGACAAAACCATTCCATGCATCAATGATTCACTGGTCGATAAATTTGGTTTAAAACCAGATATCCGTCAGTCCTTGCCACAGATAGATCGGTGTATTGATTTCAGTTCCCGACCTGAAATGCTCTTCAATTTCGATCAAGCCAATCAGCAACTGAATATTAGTATTCCGCAAGCCTGGCTGGCGTGGCACTCAGAAAACTGGGCTCCCCCCTCTACATGGAAAGAAGGTGTTGCCGGTGTCCTGATGGATTACAACTTGTTTGCCAGCAGCTACCGCCCACAGGACGGCAGCAGCAGCACTAACCTGAATGCCTACGGTACCGCCGGAATTAACGCCGGGGCATGGCGCTTACGCAGTGATTACCAGCTTAATAAGACCGATAGCGAAGATAACCATGACCAGTCAGGCGGAATATCGCGCACCTATCTTTTTCGTCCATTACCGCAATTAGGCTCTAAGTTAACCCTCGGCGAAACCGATTTCAGTTCCAATATTTTCGATGGTTTTTCTTATACCGGCGCGGCACTGGCGAGTGACGATCGAATGTTACCGTGGGAGCTGCGTGGCTACGCCCCACAAATTAGCGGTATTGCACAGACCAATGCCACGGTGACGATCAGTCAATCAGGCCGCGTCATTTACCAGAAAAAAGTCCCGCCAGGCCCGTTTATTATTGATGACCTCAATCAGTCTGTTCAGGGCACGCTGGATGTCAAAGTGACGGAAGAAGATGGTCGGGTGAACAATTTCCAGGTTTCGGCAGCATCGACGCCCTTCCTGACTCGCCAGGGACAGGTTCGCTATAAATTGGCCGCGGGTCAGCCACGGCCTTCCATGTCACATCAAACTGAAAATGAAACCTTTTTTAGCAATGAAGTTTCCTGGGGGATGCTCTCAAACACCTCGCTGTACGGCGGCCTGCTGATTTCTGATGATGACTACCATTCTGCCGCAATGGGTATCGGGCAAAATATGCTGTGGCTTGGCGCACTGTCCTTTGATGTCACCTGGGCCAGTAGCCATTTTGATACTCAGCAGGACGAGCGGGGCTTAAGCTACCGTTTTAATTACAGCAAACAAGTGGATGCCACCAACAGCACGATTTCGCTCGCCGCTTATCGCTTCTCAGATCGTCATTTTCACAGCTACGCCAACTATCTGGATCACAAATACAACGACAGCGATGCGCAGGACGAAAAACAGACGATCAGCTTATCCGTGGGCCAACCGATTACCCCACTAAACCTCAATCTTTACGCCAACCTGCTACATCAAACCTGGTGGAATGCAGACGCCTCCACGACCGCCAACATCACAGCAGGTTTTAATGTTGATATTGGTGACTGGAGAGATATCTCGATTTCGACGTCATTCAATACGACCCACTACGAAGATAAAGATCGCGACAACCAGATTTATCTGTCGATTTCGCTCCCCTTCGGTAACGGTGGTCGGGTTGGCTATGACATGCAAAACAGTAGCCACAGCACCATACACCGCATGTCGTGGAACGATACGCTGGATGAACGTAATAGCTGGGGCATGTCTGCCGGACTGCAATCCGATCGTCCGGACAATGGAGCCCAGGTGAGCGGTAACTATCAGCACCTGAGTTCAGCGGGTGAGTGGGATATTTCTGGTACCTATGCCGCCAGTGATTACAGTTCCGTCAGCAGCAGCTGGAGCGGTTCTTTCACCGCAACCCAATATGGTGCAGCATTTCATCGCCGCAGCTCCACCAATGAACCACGCCTGATGGTCAGCACCGATGGCGTGGCAGATATTCCGGTTCAGGGCAATCTCGACTACACCAACCATTTTGGCATTGCGGTGGTGCCGTTGATTTCCAGTTACCAGCCTTCCACCGTGGCGGTGAACATGAATGACTTACCCGACGGCGTAACAGTTGCAGAAAACGTCATCAAGGAAACATGGATTGAAGGCGCGATAGGTTACAAATCACTGGCTTCCCGTTCCGGTAAAGACGTTAACGTCATCATACGCAACGCCAGCGGTCAGTTCCCTCCCCTCGGTGCGGATATCCGCCAGGATGACAGCGGCATTAGCGTGGGTATGGTTGGCGAGGAAGGACATGCCTGGTTAAGCGGTGTCGCTGAAAATCAACTGTTTACCGTGGTCTGGGGTGAGCAAAGCTGCATTATTCATCTGCCAGAACGTCTGGAAGACACGACCAAACGCCTGATTTTACCTTGTCATTAA", + "dna_sequence_length": 2448, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_707", + "location": [ + [ + "NC_000913", + 752169, + "-", + 2448 + ] + ], + "md5": "91c218558b2370ff221fe525797f1f2d", + "parent_gene": "", + "protein_md5": "baeda8bbf20258d5f6491a4fb1e1f503", + "protein_translation": "MNIYRLSFVSCLVMAMPCAMAVEFNLNVLDKSMRDRIDISLLKEKGVIAPGEYFVSVAVNNNKISNGQKINWQKKGDKTIPCINDSLVDKFGLKPDIRQSLPQIDRCIDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWAPPSTWKEGVAGVLMDYNLFASSYRPQDGSSSTNLNAYGTAGINAGAWRLRSDYQLNKTDSEDNHDQSGGISRTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLISDDDYHSAAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVGYDMQNSSHSTIHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDISGTYAASDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGKDVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQLFTVVWGEQSCIIHLPERLEDTTKRLILPCH", + "protein_translation_length": 815, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002448" + ], + [ + "gene_synonym", + "ECK0708" + ], + [ + "gene_synonym", + "EcoGene:EG12359" + ], + [ + "gene_synonym", + "GI:16128694" + ], + [ + "gene_synonym", + "GeneID:945325" + ], + [ + "gene_synonym", + "JW0709" + ], + [ + "gene_synonym", + "NP_415247.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37909" + ], + [ + "gene_synonym", + "b0719" + ], + [ + "gene_synonym", + "ybgD" + ] + ], + "dna_sequence": "ATGTTTAAAGGACAAAAAACATTGGCCGCACTGGCCGTATCTCTGCTGTTCACTGCACCTGTTTATGCTGCTGATGAAGGTTCTGGCGAAATTCACTTTAAGGGGGAGGTTATTGAAGCACCTTGTGAAATTCATCCAGAAGATATTGATAAAAACATAGATCTTGGACAAGTCACGACAACCCATATAAACCGGGAGCATCATAGCAATAAAGTGGCCGTCGACATTCGCTTGATCAACTGTGATCTGCCTGCTTCTGACAACGGTAGCGGAATGCCGGTATCCAAAGTTGGCGTAACCTTCGATAGCACGGCTAAGACAACTGGTGCTACGCCTTTGTTGAGCAACACCAGTGCAGGCGAAGCAACTGGGGTCGGTGTACGACTGATGGACAAAAATGACGGTAACATCGTATTAGGTTCAGCCGCGCCAGATCTTGACCTGGATGCAAGCTCATCAGAACAGACGCTGAACTTTTTCGCCTGGATGGAACAAATTGATAATGCAGTCGATGTCACGGCAGGTGAAGTAACCGCTAACGCAACCTACGTGCTGGATTATAAATAA", + "dna_sequence_length": 567, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_708", + "location": [ + [ + "NC_000913", + 752795, + "-", + 567 + ] + ], + "md5": "df5b99b53116addd5bff610a4c62e073", + "parent_gene": "", + "protein_md5": "b21734bfec3bf50bf02b84178b2d21f3", + "protein_translation": "MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHPEDIDKNIDLGQVTTTHINREHHSNKVAVDIRLINCDLPASDNGSGMPVSKVGVTFDSTAKTTGATPLLSNTSAGEATGVGVRLMDKNDGNIVLGSAAPDLDLDASSSEQTLNFFAWMEQIDNAVDVTAGEVTANATYVLDYK", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002451" + ], + [ + "gene_synonym", + "ECK0709" + ], + [ + "gene_synonym", + "EcoGene:EG10402" + ], + [ + "gene_synonym", + "GI:16128695" + ], + [ + "gene_synonym", + "GeneID:945323" + ], + [ + "gene_synonym", + "JW0710" + ], + [ + "gene_synonym", + "NP_415248.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH7" + ], + [ + "gene_synonym", + "b0720" + ], + [ + "gene_synonym", + "gltA" + ], + [ + "gene_synonym", + "gluT" + ], + [ + "gene_synonym", + "icdB" + ] + ], + "dna_sequence": "ATGGCTGATACAAAAGCAAAACTCACCCTCAACGGGGATACAGCTGTTGAACTGGATGTGCTGAAAGGCACGCTGGGTCAAGATGTTATTGATATCCGTACTCTCGGTTCAAAAGGTGTGTTCACCTTTGACCCAGGCTTCACTTCAACCGCATCCTGCGAATCTAAAATTACTTTTATTGATGGTGATGAAGGTATTTTGCTGCACCGCGGTTTCCCGATCGATCAGCTGGCGACCGATTCTAACTACCTGGAAGTTTGTTACATCCTGCTGAATGGTGAAAAACCGACTCAGGAACAGTATGACGAATTTAAAACTACGGTGACCCGTCATACCATGATCCACGAGCAGATTACCCGTCTGTTCCATGCTTTCCGTCGCGACTCGCATCCAATGGCAGTCATGTGTGGTATTACCGGCGCGCTGGCGGCGTTCTATCACGACTCGCTGGATGTTAACAATCCTCGTCACCGTGAAATTGCCGCGTTCCGCCTGCTGTCGAAAATGCCGACCATGGCCGCGATGTGTTACAAGTATTCCATTGGTCAGCCATTTGTTTACCCGCGCAACGATCTCTCCTACGCCGGTAACTTCCTGAATATGATGTTCTCCACGCCGTGCGAACCGTATGAAGTTAATCCGATTCTGGAACGTGCTATGGACCGTATTCTGATCCTGCACGCTGACCATGAACAGAACGCCTCTACCTCCACCGTGCGTACCGCTGGCTCTTCGGGTGCGAACCCGTTTGCCTGTATCGCAGCAGGTATTGCTTCACTGTGGGGACCTGCGCACGGCGGTGCTAACGAAGCGGCGCTGAAAATGCTGGAAGAAATCAGCTCCGTTAAACACATTCCGGAATTTGTTCGTCGTGCGAAAGACAAAAATGATTCTTTCCGCCTGATGGGCTTCGGTCACCGCGTGTACAAAAATTACGACCCGCGCGCCACCGTAATGCGTGAAACCTGCCATGAAGTGCTGAAAGAGCTGGGCACGAAGGATGACCTGCTGGAAGTGGCTATGGAGCTGGAAAACATCGCGCTGAACGACCCGTACTTTATCGAGAAGAAACTGTACCCGAACGTCGATTTCTACTCTGGTATCATCCTGAAAGCGATGGGTATTCCGTCTTCCATGTTCACCGTCATTTTCGCAATGGCACGTACCGTTGGCTGGATCGCCCACTGGAGCGAAATGCACAGTGACGGTATGAAGATTGCCCGTCCGCGTCAGCTGTATACAGGATATGAAAAACGCGACTTTAAAAGCGATATCAAGCGTTAA", + "dna_sequence_length": 1284, + "functions": [ + "citrate synthase" + ], + "id": "CDS_709", + "location": [ + [ + "NC_000913", + 754468, + "-", + 1284 + ] + ], + "md5": "ac3ddaea401c24a0235c3281d507b09a", + "parent_gene": "", + "protein_md5": "80831e5897dcdbfa195d6398bb4b3eea", + "protein_translation": "MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002460" + ], + [ + "gene_synonym", + "ECK0710" + ], + [ + "gene_synonym", + "EcoGene:EG10933" + ], + [ + "gene_synonym", + "GI:16128696" + ], + [ + "gene_synonym", + "GeneID:945316" + ], + [ + "gene_synonym", + "JW0711" + ], + [ + "gene_synonym", + "NP_415249.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69054" + ], + [ + "gene_synonym", + "b0721" + ], + [ + "gene_synonym", + "cybA" + ], + [ + "gene_synonym", + "sdhC" + ] + ], + "dna_sequence": "ATGATAAGAAATGTGAAAAAACAAAGACCTGTTAATCTGGACCTACAGACCATCCGGTTCCCCATCACGGCGATAGCGTCCATTCTCCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGTCCTCGTATGGTAA", + "dna_sequence_length": 390, + "functions": [ + "succinate dehydrogenase, membrane subunit, binds cytochrome b556" + ], + "id": "CDS_710", + "location": [ + [ + "NC_000913", + 755177, + "+", + 390 + ] + ], + "md5": "66c8b3940197869a4ee183c72b676a35", + "parent_gene": "", + "protein_md5": "2ff14aaa99058c88cf57dad6b75d557a", + "protein_translation": "MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002464" + ], + [ + "gene_synonym", + "ECK0711" + ], + [ + "gene_synonym", + "EcoGene:EG10934" + ], + [ + "gene_synonym", + "GI:16128697" + ], + [ + "gene_synonym", + "GeneID:945322" + ], + [ + "gene_synonym", + "JW0712" + ], + [ + "gene_synonym", + "NP_415250.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC44" + ], + [ + "gene_synonym", + "b0722" + ], + [ + "gene_synonym", + "sdhD" + ] + ], + "dna_sequence": "ATGGTAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGTTTCTTCGCCTCTGCGTTCACCAAAGTGTTCACCCTGCTGGCGCTGTTTTCTATCTTGATCCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCGCTGGCTTTGCGCCTGATGCTGCAACTGGTGATTGTCGTTGCACTGGTGGTTTACGTGATTTATGGATTCGTTGTGGTGTGGGGTGTGTGA", + "dna_sequence_length": 348, + "functions": [ + "succinate dehydrogenase, membrane subunit, binds cytochrome b556" + ], + "id": "CDS_711", + "location": [ + [ + "NC_000913", + 755560, + "+", + 348 + ] + ], + "md5": "6d0e29e3c4c19456610cc438612d65b1", + "parent_gene": "", + "protein_md5": "753b0fd70db6b7058990018f6ede9e17", + "protein_translation": "MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002466" + ], + [ + "gene_synonym", + "ECK0712" + ], + [ + "gene_synonym", + "EcoGene:EG10931" + ], + [ + "gene_synonym", + "GI:16128698" + ], + [ + "gene_synonym", + "GeneID:945402" + ], + [ + "gene_synonym", + "JW0713" + ], + [ + "gene_synonym", + "NP_415251.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC41" + ], + [ + "gene_synonym", + "b0723" + ], + [ + "gene_synonym", + "sdhA" + ] + ], + "dna_sequence": "ATGAAATTGCCAGTCAGAGAATTTGATGCAGTTGTGATTGGTGCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTATCAACGTCCGTTTGGCGGTCAGTCGAAAAACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACACCACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTACCGTGCTGGCGACTGGCGGAGCAGGGCGTATTTATCAGTCCACCACCAACGCCCACATTAACACCGGCGACGGTGTCGGCATGGCTATCCGTGCCGGCGTACCGGTGCAGGATATGGAAATGTGGCAGTTCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGATGGTCCGTGGGGGCCACACGCGAAACTGAAACTCGATCACCTGGGTAAAGAAGTTCTCGAATCCCGTCTGCCGGGTATCCTGGAGCTTTCCCGTACCTTCGCTCACGTCGATCCGGTGAAAGAGCCGATTCCGGTTATCCCAACCTGTCACTACATGATGGGCGGTATTCCGACCAAAGTTACCGGTCAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCACTGCGCGATGCCAGCGAGTCTGATGTTGAAGCGTCTCTGGATCGCCTGAACCGCTGGAACAATAATCGTAACGGTGAAGATCCGGTGGCGATCCGTAAAGCGCTGCAAGAATGTATGCAGCATAACTTCTCGGTCTTCCGTGAAGGTGATGCGATGGCGAAAGGGCTTGAGCAGTTGAAAGTGATCCGCGAGCGTCTGAAAAATGCCCGTCTGGATGACACTTCCAGCGAGTTCAACACCCAGCGCGTTGAGTGCCTGGAACTGGATAACCTGATGGAAACGGCGTATGCAACGGCTGTTTCTGCCAACTTCCGTACCGAAAGCCGTGGCGCGCATAGCCGCTTCGACTTCCCGGATCGTGATGATGAAAACTGGCTGTGCCACTCCCTGTATCTGCCAGAGTCGGAATCCATGACGCGCCGAAGCGTCAACATGGAACCGAAACTGCGCCCGGCATTCCCGCCGAAGATTCGTACTTACTAA", + "dna_sequence_length": 1767, + "functions": [ + "succinate dehydrogenase, flavoprotein subunit" + ], + "id": "CDS_712", + "location": [ + [ + "NC_000913", + 755907, + "+", + 1767 + ] + ], + "md5": "1a1dfc65ecf14160bc7735f22fd7b194", + "parent_gene": "", + "protein_md5": "d58a08a8499799efa72d9df42f21ed0f", + "protein_translation": "MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY", + "protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002468" + ], + [ + "gene_synonym", + "ECK0713" + ], + [ + "gene_synonym", + "EcoGene:EG10932" + ], + [ + "gene_synonym", + "GI:16128699" + ], + [ + "gene_synonym", + "GeneID:945300" + ], + [ + "gene_synonym", + "JW0714" + ], + [ + "gene_synonym", + "NP_415252.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07014" + ], + [ + "gene_synonym", + "b0724" + ], + [ + "gene_synonym", + "sdhB" + ] + ], + "dna_sequence": "ATGAGACTCGAGTTTTCAATTTATCGCTATAACCCGGATGTTGATGATGCTCCGCGTATGCAGGATTACACCCTGGAAGCGGATGAAGGTCGCGACATGATGCTGCTGGATGCGCTTATCCAGCTAAAAGAGAAAGATCCCAGCCTGTCGTTCCGCCGCTCCTGCCGTGAAGGTGTGTGCGGTTCCGACGGTCTGAACATGAACGGCAAGAATGGTCTGGCCTGTATTACCCCGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATGGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAA", + "dna_sequence_length": 717, + "functions": [ + "succinate dehydrogenase, FeS subunit" + ], + "id": "CDS_713", + "location": [ + [ + "NC_000913", + 757689, + "+", + 717 + ] + ], + "md5": "15a8e47bdfc6c2c8a4a1c4135ccb5f65", + "parent_gene": "", + "protein_md5": "497a2dbf0db113e210bc00046c9cabdc", + "protein_translation": "MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002478" + ], + [ + "gene_synonym", + "ECK0714" + ], + [ + "gene_synonym", + "EcoGene:EG10979" + ], + [ + "gene_synonym", + "GI:16128701" + ], + [ + "gene_synonym", + "GeneID:945303" + ], + [ + "gene_synonym", + "JW0715" + ], + [ + "gene_synonym", + "NP_415254.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG3" + ], + [ + "gene_synonym", + "b0726" + ], + [ + "gene_synonym", + "lys" + ], + [ + "gene_synonym", + "sucA" + ] + ], + "dna_sequence": "ATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGTTGACGCTAACTGGCGTTCGACGTTCCAGCAGTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTGCCGAGTATATGCACATTACCAGCACCGAAGAAAAACGCTGGATCCAACAGCGTATCGAGTCTGGTCGCGCGACTTTCAATAGCGAAGAGAAAAAACGCTTCTTAAGCGAACTGACCGCCGCTGAAGGTCTTGAACGTTACCTCGGCGCAAAATTCCCTGGCGCAAAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTGGCGCTGGCGTTTAACCCGTCTCACCTTGAGATTGTAAGCCCGGTAGTTATCGGTTCTGTTCGTGCCCGTCTGGACAGACTTGATGAGCCGAGCAGCAACAAAGTGCTGCCAATCACCATCCACGGTGACGCCGCAGTGACCGGGCAGGGCGTGGTTCAGGAAACCCTGAACATGTCGAAAGCGCGTGGTTATGAAGTTGGCGGTACGGTACGTATCGTTATCAACAACCAGGTTGGTTTCACCACCTCTAATCCGCTGGATGCCCGTTCTACGCCGTACTGTACTGATATCGGTAAGATGGTTCAGGCCCCGATTTTCCACGTTAACGCGGACGATCCGGAAGCCGTTGCCTTTGTGACCCGTCTGGCGCTCGATTTCCGTAACACCTTTAAACGTGATGTCTTCATCGACCTGGTGTGCTACCGCCGTCACGGCCACAACGAAGCCGACGAGCCGAGCGCAACCCAGCCGCTGATGTATCAGAAAATCAAAAAACATCCGACACCGCGCAAAATCTACGCTGACAAGCTGGAGCAGGAAAAAGTGGCGACGCTGGAAGATGCCACCGAGATGGTTAACCTGTACCGCGATGCGCTGGATGCTGGCGATTGCGTAGTGGCAGAGTGGCGTCCGATGAACATGCACTCTTTCACCTGGTCGCCGTACCTCAACCACGAATGGGACGAAGAGTACCCGAACAAAGTTGAGATGAAGCGCCTGCAGGAGCTGGCGAAACGCATCAGCACGGTGCCGGAAGCAGTTGAAATGCAGTCTCGCGTTGCCAAGATTTATGGCGATCGCCAGGCGATGGCTGCCGGTGAGAAACTGTTCGACTGGGGCGGTGCGGAAAACCTCGCTTACGCCACGCTGGTTGATGAAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGCGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAGGTGGTTATCGACCAGTTCATCTCCTCTGGCGAACAGAAATGGGGCCGGATGTGTGGTCTGGTGATGTTGCTGCCGCACGGTTACGAAGGGCAGGGGCCGGAGCACTCCTCCGCGCGTCTGGAACGTTATCTGCAACTTTGTGCTGAGCAAAACATGCAGGTTTGCGTACCGTCTACCCCGGCACAGGTTTACCACATGCTGCGTCGTCAGGCGCTGCGCGGGATGCGTCGTCCGCTGGTCGTGATGTCGCCGAAATCCCTGCTGCGTCATCCGCTGGCGGTTTCCAGCCTCGAAGAACTGGCGAACGGCACCTTCCTGCCAGCCATCGGTGAAATCGACGAGCTTGATCCGAAGGGCGTGAAGCGCGTAGTGATGTGTTCTGGTAAGGTTTATTACGACCTGCTGGAACAGCGTCGTAAGAACAATCAACACGATGTCGCCATTGTGCGTATCGAGCAACTCTACCCGTTCCCGCATAAAGCGATGCAGGAAGTGTTGCAGCAGTTTGCTCACGTCAAGGATTTTGTCTGGTGCCAGGAAGAGCCGCTCAACCAGGGCGCATGGTACTGCAGCCAGCATCATTTCCGTGAAGTGATTCCGTTTGGGGCTTCTCTGCGTTATGCAGGCCGCCCGGCCTCCGCCTCTCCGGCGGTAGGGTATATGTCCGTTCACCAGAAACAGCAACAAGATCTGGTTAATGACGCGCTGAACGTCGAATAA", + "dna_sequence_length": 2802, + "functions": [ + "2-oxoglutarate decarboxylase, thiamine triphosphate-binding" + ], + "id": "CDS_714", + "location": [ + [ + "NC_000913", + 758706, + "+", + 2802 + ] + ], + "md5": "6fdab24387d9618535979e0ee4e07c7b", + "parent_gene": "", + "protein_md5": "5cf06ce62b9e2618a775454fd37dbb54", + "protein_translation": "MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE", + "protein_translation_length": 933, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002480" + ], + [ + "gene_synonym", + "ECK0715" + ], + [ + "gene_synonym", + "EcoGene:EG10980" + ], + [ + "gene_synonym", + "GI:16128702" + ], + [ + "gene_synonym", + "GeneID:945307" + ], + [ + "gene_synonym", + "JW0716" + ], + [ + "gene_synonym", + "NP_415255.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG6" + ], + [ + "gene_synonym", + "b0727" + ], + [ + "gene_synonym", + "sucB" + ] + ], + "dna_sequence": "ATGAGTAGCGTAGATATTCTGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGGTAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGGCGCAACGCCAGCAGGCGTCTCTGGAAGAGCAAAACAACGATGCGTTAAGCCCGGCGATCCGTCGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGATCCTGCCGATGATGTACCTGGCGCTGTCCTACGATCACCGTCTGATCGATGGTCGCGAATCCGTGGGCTTCCTGGTAACGATCAAAGAGTTGCTGGAAGATCCGACGCGTCTGCTGCTGGACGTGTAG", + "dna_sequence_length": 1218, + "functions": [ + "dihydrolipoyltranssuccinase" + ], + "id": "CDS_715", + "location": [ + [ + "NC_000913", + 761522, + "+", + 1218 + ] + ], + "md5": "afe1c619799f25b1263bcceaaafa66ce", + "parent_gene": "", + "protein_md5": "e7d1fcbc78938f9ff5476c58816c821b", + "protein_translation": "MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002483" + ], + [ + "gene_synonym", + "ECK0716" + ], + [ + "gene_synonym", + "EcoGene:EG10981" + ], + [ + "gene_synonym", + "GI:16128703" + ], + [ + "gene_synonym", + "GeneID:945312" + ], + [ + "gene_synonym", + "JW0717" + ], + [ + "gene_synonym", + "NP_415256.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A836" + ], + [ + "gene_synonym", + "b0728" + ], + [ + "gene_synonym", + "sucC" + ] + ], + "dna_sequence": "ATGAACTTACATGAATATCAGGCAAAACAACTTTTTGCCCGCTATGGCTTACCAGCACCGGTGGGTTATGCCTGTACTACTCCGCGCGAAGCAGAAGAAGCCGCTTCAAAAATCGGTGCCGGTCCGTGGGTAGTGAAATGTCAGGTTCACGCTGGTGGCCGCGGTAAAGCGGGCGGTGTGAAAGTTGTAAACAGCAAAGAAGACATCCGTGCTTTTGCAGAAAACTGGCTGGGCAAGCGTCTGGTAACGTATCAAACAGATGCCAATGGCCAACCGGTTAACCAGATTCTGGTTGAAGCAGCGACCGATATCGCTAAAGAGCTGTATCTCGGTGCCGTTGTTGACCGTAGTTCCCGTCGTGTGGTCTTTATGGCCTCCACCGAAGGCGGCGTGGAAATCGAAAAAGTGGCGGAAGAAACTCCGCACCTGATCCATAAAGTTGCGCTTGATCCGCTGACTGGCCCGATGCCGTATCAGGGACGCGAGCTGGCGTTCAAACTGGGTCTGGAAGGTAAACTGGTTCAGCAGTTCACCAAAATCTTCATGGGCCTGGCGACCATTTTCCTGGAGCGCGACCTGGCGTTGATCGAAATCAACCCGCTGGTCATCACCAAACAGGGCGATCTGATTTGCCTCGACGGCAAACTGGGCGCTGACGGCAACGCACTGTTCCGCCAGCCTGATCTGCGCGAAATGCGTGACCAGTCGCAGGAAGATCCGCGTGAAGCACAGGCTGCACAGTGGGAACTGAACTACGTTGCGCTGGACGGTAACATCGGTTGTATGGTTAACGGCGCAGGTCTGGCGATGGGTACGATGGACATCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCGCGGTAGCAGAAGTGGGTGTTAACGTACCGGTCGTGGTACGTCTGGAAGGTAACAACGCCGAACTCGGCGCGAAGAAACTGGCTGACAGCGGCCTGAATATTATTGCAGCAAAAGGTCTGACGGATGCAGCTCAGCAGGTTGTTGCCGCAGTGGAGGGGAAATAA", + "dna_sequence_length": 1167, + "functions": [ + "succinyl-CoA synthetase, beta subunit" + ], + "id": "CDS_716", + "location": [ + [ + "NC_000913", + 763014, + "+", + 1167 + ] + ], + "md5": "6e8b7961e10b62aa34541b8e794b8ebc", + "parent_gene": "", + "protein_md5": "d3e359441fbb6d15ad5d4ade4c910750", + "protein_translation": "MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002485" + ], + [ + "gene_synonym", + "ECK0717" + ], + [ + "gene_synonym", + "EcoGene:EG10982" + ], + [ + "gene_synonym", + "GI:16128704" + ], + [ + "gene_synonym", + "GeneID:945314" + ], + [ + "gene_synonym", + "JW0718" + ], + [ + "gene_synonym", + "NP_415257.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE9" + ], + [ + "gene_synonym", + "b0729" + ], + [ + "gene_synonym", + "sucD" + ] + ], + "dna_sequence": "ATGTCCATTTTAATCGATAAAAACACCAAGGTTATCTGCCAGGGCTTTACCGGTAGCCAGGGGACTTTCCACTCAGAACAGGCCATTGCATACGGCACTAAAATGGTTGGCGGCGTAACCCCAGGTAAAGGCGGCACCACCCACCTCGGCCTGCCGGTGTTCAACACCGTGCGTGAAGCCGTTGCTGCCACTGGCGCTACCGCTTCTGTTATCTACGTACCAGCACCGTTCTGCAAAGACTCCATTCTGGAAGCCATCGACGCAGGCATCAAACTGATTATCACCATCACTGAAGGCATCCCGACGCTGGATATGCTGACCGTGAAAGTGAAGCTGGATGAAGCAGGCGTTCGTATGATCGGCCCGAACTGCCCAGGCGTTATCACTCCGGGTGAATGCAAAATCGGTATCCAGCCTGGTCACATTCACAAACCGGGTAAAGTGGGTATCGTTTCCCGTTCCGGTACACTGACCTATGAAGCGGTTAAACAGACCACGGATTACGGTTTCGGTCAGTCGACCTGTGTCGGTATCGGCGGTGACCCGATCCCGGGCTCTAACTTTATCGACATTCTCGAAATGTTCGAAAAAGATCCGCAGACCGAAGCGATCGTGATGATCGGTGAGATCGGCGGTAGCGCTGAAGAAGAAGCAGCTGCGTACATCAAAGAGCACGTTACCAAGCCAGTTGTGGGTTACATCGCTGGTGTGACTGCGCCGAAAGGCAAACGTATGGGCCACGCGGGTGCCATCATTGCCGGTGGGAAAGGGACTGCGGATGAGAAATTCGCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAA", + "dna_sequence_length": 870, + "functions": [ + "succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" + ], + "id": "CDS_717", + "location": [ + [ + "NC_000913", + 764180, + "+", + 870 + ] + ], + "md5": "e0c4443ded091533b5070861b0c0882a", + "parent_gene": "", + "protein_md5": "952a12588809478949035bbbb8605308", + "protein_translation": "MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002487" + ], + [ + "gene_synonym", + "ECK0718" + ], + [ + "gene_synonym", + "EcoGene:EG11109" + ], + [ + "gene_synonym", + "GI:16128705" + ], + [ + "gene_synonym", + "GeneID:945371" + ], + [ + "gene_synonym", + "JW0719" + ], + [ + "gene_synonym", + "NP_415258.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13669" + ], + [ + "gene_synonym", + "b0730" + ], + [ + "gene_synonym", + "farR" + ], + [ + "gene_synonym", + "mngR" + ], + [ + "gene_synonym", + "ybgB" + ] + ], + "dna_sequence": "ATGGGACACAAGCCCTTATACCGGCAGATTGCCGATCGCATTCGTGAACAAATTGCGCGTGGCGAGCTTAAACCTGGCGATGCGTTACCCACTGAATCAGCGCTACAAACAGAGTTTGGCGTCAGCCGGGTTACGGTGCGTCAGGCTTTGCGCCAGCTAGTCGAGCAGCAGATCCTCGAAAGCATTCAGGGCAGCGGGACTTACGTCAAAGAAGAGCGGGTCAATTACGATATTTTTCAGTTAACCAGTTTTGATGAAAAACTGTCGGACCGTCACGTCGATACACACAGTGAAGTTCTGATATTCGAAGTGATTCCGGCTGACGATTTTCTTCAGCAACAGCTACAAATCACCCCGCAGGATCGTGTGTGGCATGTGAAGCGCGTGCGCTATCGCAAGCAAAAGCCAATGGCGCTGGAAGAAACCTGGATGCCGCTTGCGTTGTTCCCGGATCTCACCTGGCAGGTCATGGAAAATTCGAAATATCACTTTATCGAAGAAGTGAAGAAAATGGTTATCGATCGTAGCGAACAGGAAATCATTCCTCTGATGCCAACCGAAGAGATGAGCCGTCTGCTTAATATCAGCCAGACAAAGCCGATTCTTGAAAAAGTATCGCGTGGATATTTAGTTGATGGTCGGGTGTTTGAATATAGCCGCAACGCTTTTAATACCGATGACTATAAATTTACCCTGATAGCGCAGCGAAAATCATCGCGATAA", + "dna_sequence_length": 723, + "functions": [ + "transcriptional repressor for the mannosyl-D-glycerate catabolic operon" + ], + "id": "CDS_718", + "location": [ + [ + "NC_000913", + 765875, + "-", + 723 + ] + ], + "md5": "6576c743d62157eefdbb2885ce2e0b4d", + "parent_gene": "", + "protein_md5": "ba79ccaf2c42986b22377382b12c8017", + "protein_translation": "MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002493" + ], + [ + "gene_synonym", + "ECK0719" + ], + [ + "gene_synonym", + "EcoGene:EG13235" + ], + [ + "gene_synonym", + "GI:16128706" + ], + [ + "gene_synonym", + "GeneID:945355" + ], + [ + "gene_synonym", + "JW0720" + ], + [ + "gene_synonym", + "NP_415259.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P54745" + ], + [ + "gene_synonym", + "b0731" + ], + [ + "gene_synonym", + "hrsA" + ], + [ + "gene_synonym", + "mngA" + ] + ], + "dna_sequence": "ATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCTTGGCCCGACCGCCTTAGGTGAAGGGTTGGCTGTGCCGCATGGCAAAACTGCTGCGGTAAAAGAAGCGGCGTTTGCGGTCGCCACACTCAGCGAGCCGCTTCAGTGGGAAGGCGTTGATGGCCCGGAAGCAGTTGATTTAGTGGTGCTGCTGGCGATTCCCCCCAATGAAGCGGGTACTACGCATATGCAACTGCTGACAGCGCTGACCACGCGCCTTGCGGATGATGAGATTCGGGCGCGTATACAGTCGGCGACGACGCCTGATGAGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGCAACCGCCTGTATTTTTGCGGCTGAAGTCGCCATCAAGGAGAGTGAGCGTTTTAATGGCATTCCCGCGCTTTCAGTGCCTGTTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGTACCGGTGCTCGCGGCCTATACCGCCTATTCTCTGGCAGATAAACCGGCGTTAGCGCCAGGCTTTGCGGCTGGACTTGCCGCCAACATGATCGGCTCCGGGTTTCTCGGCGCGGTCGTTGGCGGATTGATAGCCGGTTACTTGATGCGCTGGGTGAAAAATCACTTGCGTCTTAGCAGTAAATTCAATGGATTCCTGACTTTTTATCTCTACCCGGTGCTCGGTACGTTGGGAGCGGGCAGTCTGATGCTGTTTGTGGTGGGGGAACCTGTCGCCTGGATCAATAACTCGCTTACCGCCTGGCTGAACGGTCTGTCAGGAAGTAACGCGCTGTTGCTGGGTGCCATTCTCGGTTTTATGTGTTCCTTTGACCTTGGAGGGCCAGTGAATAAAGCCGCTTATGCATTCTGCCTGGGCGCAATGGCGAACGGCGTTTACGGCCCGTATGCCATTTTCGCCTCCGTCAAAATGGTTTCGGCATTTACCGTAACCGCTTCCACGATGCTCGCACCGCGCCTGTTTAAAGAGTTTGAAATTGAGACCGGGAAATCCACCTGGCTGTTAGGGCTGGCAGGTATTACCGAAGGGGCGATCCCGATGGCGATTGAAGATCCGCTGCGGGTTATTGGTTCGTTTGTGCTGGGCTCTATGGTAACGGGCGCTATTGTCGGTGCGATGAATATCGGCCTTTCGACACCCGGTGCCGGCATTTTCTCGCTCTTTTTACTTCATGATAATGGCGCGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAATTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAA", + "dna_sequence_length": 1977, + "functions": [ + "fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component" + ], + "id": "CDS_719", + "location": [ + [ + "NC_000913", + 765984, + "+", + 1977 + ] + ], + "md5": "c49fe5a59541a13e5941849c0d7faac6", + "parent_gene": "", + "protein_md5": "9630067511ac7a773b5b05692521945a", + "protein_translation": "MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLMWRRHAVKHGNYLTDGVMP", + "protein_translation_length": 658, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002495" + ], + [ + "gene_synonym", + "ECK0720" + ], + [ + "gene_synonym", + "EcoGene:EG13236" + ], + [ + "gene_synonym", + "GI:16128707" + ], + [ + "gene_synonym", + "GeneID:945359" + ], + [ + "gene_synonym", + "JW0721" + ], + [ + "gene_synonym", + "NP_415260.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P54746" + ], + [ + "gene_synonym", + "b0732" + ], + [ + "gene_synonym", + "mngB" + ], + [ + "gene_synonym", + "ybgG" + ] + ], + "dna_sequence": "ATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCGTGTGAAGAAACAGGTAGAAGCCGGCAAGTTGATTATCGGCCCCTGGTATACCCAGACCGATACCACGATTGTTTCTGCGGAATCCATCGTCCGTAATCTGATGTACGGAATGCGTGACTGCCTCGCGTTTGGCGAGCCGATGAAAATAGGTTATTTACCAGATTCCTTTGGCATGTCCGGGCAACTGCCGCATATCTACAATGGATTTGGCATTACCCGCACCATGTTCTGGCGCGGATGTTCGGAGCGCCACGGTACTGATAAAACCGAGTTTTTGTGGCAAAGCAGTGACGGTAGCGAAGTGACGGCGCAGGTGCTGCCGCTGGGCTACGCCATCGGTAAGTACTTACCTGCCGACGAAAACGGATTACGTAAACGCCTCGACAGTTATTTTGACGTGCTGGAAAAAGCGTCTGTAACCAAAGAGATTTTGCTGCCGAATGGGCATGACCAGATGCCATTGCAGCAAAATATCTTCGAAGTGATGGATAAGCTACGTGAGATCTACCCTCAACGTAAGTTTGTGATGAGCCGCTTTGAAGAGGTATTTGAGAAGATCGAAGCGCAGCGAGATAATCTGGCAACCCTGAAAGGGGAATTTATTGATGGCAAATATATGCGCGTGCATCGCACCATCGGTTCTACGCGTATGGATATCAAAATTGCCCACGCGCGTATTGAAAATAAGATTGTTAATCTGCTGGAACCGCTGGCAACACTGGCCTGGACGTTGGGTTTTGAATACCACCACGGCTTGCTGGAGAAAATGTGGAAAGAGATCTTAAAAAATCATGCCCACGACAGTATCGGCTGCTGCTGTAGTGACAAAGTTCATCGCGAAATCGTCGCCCGCTTCGAACTGGCTGAAGACATGGCGGATAATCTGATTCGTTTCTACATGCGCAAAATTGCCGACAACATGCCGCAGAGCGACGCCGACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATTACGATCCCTTTATGGAGTTTGATATACAGATCAACCAGATTGTCCCTTCTATGGGCTATCGCACGCTTTATATCGAAGCGAATCAGCCTGGCAACGTAATTGCGGCAAAAAGTGACGCTGAAGGGATACTGGAAAATGCTTTCTGGCAAATTGCGCTCAATGAGGATGGTTCTCTGCAACTGGTAGATAAAGACAGCGGTGTGCGCTATGACCGGGTATTGCAAATTGAAGAAAGCTCTGATGATGGTGATGAATATGACTATTCACCCGCAAAAGAAGAGTGGGTAATTACCGCAGCGAACGCGAAACCGCAATGCGATATTATTCATGAAGCCTGGCAGAGCAGGGCTGTTATCCGCTATGACATGGCAGTGCCGCTCAATTTGTCAGAACGCAGCGCCCGGCAATCCACTGGCAGAGTAGGGGTGGTGTTGGTTGTCACTCTTAGTCATAACAGCAGGCGTATTGATGTGGATATCAATCTTGATAACCAGGCTGACGATCATCGCCTTCGTGTCCTGGTCCCTACACCTTTTAACACCGACAGTGTTCTGGCAGATACGCAGTTTGGTTCGCTAACGCGCCCCGTGAACGACAGTGCAATGAACAACTGGCAGCAAGAAGGCTGGAAAGAAGCGCCGGTTCCGGTATGGAATATGCTCAACTATGTTGCCTTACAGGAAGGGCGTAACGGCATGGCTGTCTTTAGCGAAGGGTTACGTGAATTTGAAGTCATCGGTGAAGAGAAGAAAACCTTTGCCATTACGTTGCTGCGTGGCGTGGGCTTACTGGGCAAAGAAGATCTGCTTTTAAGGCCTGGGCGGCCTTCGGGAATTAAAATGCCAGTCCCGGACTCACAACTACGTGGTCTGCTTTCTTGTCGCCTAAGTTTATTGAGTTATACCGGTACGCCAACCGCCGCTGGTGTAGCTCAGCAGGCGCGAGCATGGCTGACTCCAGTACAGTGTTACAACAAAATCCCATGGGATGTGATGAAGCTCAACAAAGCCGGATTCAACGTGCCGGAAAGTTATAGTTTGTTGAAAATGCCCCCAGTGGGATGCCTGATAAGCGCACTTAAGAAAGCTGAAGACCGACAAGAAGTGATTTTACGGCTGTTTAATCCGGCTGAATCAGCAACCTGTGATGCGACTGTTGCTTTCAGTCGCGAGGTGATTTCTTGCTCAGAAACGATGATGGATGAACACATTACCACCGAGGAAAATCAAGGTTCAAATCTATCGGGGCCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGA", + "dna_sequence_length": 2634, + "functions": [ + "alpha-mannosidase" + ], + "id": "CDS_720", + "location": [ + [ + "NC_000913", + 767978, + "+", + 2634 + ] + ], + "md5": "a85216c561260c5e4b12e9fbe285b591", + "parent_gene": "", + "protein_md5": "6de0114ef053eb768d02c8e101cfd3ec", + "protein_translation": "MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVIRYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTPFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA", + "protein_translation_length": 877, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002499" + ], + [ + "gene_synonym", + "ECK0721" + ], + [ + "gene_synonym", + "EcoGene:EG10173" + ], + [ + "gene_synonym", + "GI:90111166" + ], + [ + "gene_synonym", + "GeneID:945341" + ], + [ + "gene_synonym", + "JW0722" + ], + [ + "gene_synonym", + "NP_415261.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABJ9" + ], + [ + "gene_synonym", + "b0733" + ], + [ + "gene_synonym", + "cydA" + ] + ], + "dna_sequence": "ATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCGGGACTAACTGGTCTTACTATTCCCACTATGTAGGGGATATCTTCGGTGCGCCGCTGGCAATCGAAGGTCTGATGGCCTTCTTCCTCGAATCCACCTTTGTAGGTCTGTTCTTCTTCGGTTGGGATCGTCTGGGTAAAGTTCAGCATATGTGTGTCACCTGGCTGGTGGCGCTCGGTTCAAACCTGTCCGCACTGTGGATTCTGGTTGCGAACGGCTGGATGCAAAACCCAATCGCGTCCGATTTCAACTTTGAAACTATGCGTATGGAGATGGTGAGCTTCTCCGAGCTGGTGCTTAACCCGGTTGCTCAGGTGAAATTCGTTCACACTGTAGCGTCTGGTTATGTGACTGGCGCGATGTTCATCCTCGGTATCAGCGCATGGTATATGCTGAAAGGTCGTGACTTCGCCTTCGCTAAACGCTCCTTTGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAACCAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACAAATTTGCGATTCAGATCCCTTACGCACTGGGCATCATTGCAACGCGTTCCGTGGATACCCCGGTTATCGGCCTGAAAGAGCTGATGGTGCAGCATGAAGAACGCATTCGTAACGGGATGAAGGCGTACTCTCTGCTCGAACAACTGCGTTCTGGTTCTACCGACCAGGCGGTTCGTGACCAGTTCAATAGCATGAAGAAAGACCTCGGTTACGGTCTGCTGCTGAAACGCTATACGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCTGGTGGCAGAATTGTTCTTAATGTTCAAGTTTGCACGCCTCGGCCCAAGCAGCCTGAAAACCGGTCGCTATCACTTTGAGCAGTCTTCCACGACTACTCAGCCGGCACGCTAA", + "dna_sequence_length": 1569, + "functions": [ + "cytochrome d terminal oxidase, subunit I" + ], + "id": "CDS_721", + "location": [ + [ + "NC_000913", + 771458, + "+", + 1569 + ] + ], + "md5": "46c8490519bfcfb3cc67d5f883b4c44e", + "parent_gene": "", + "protein_md5": "24e689b003b14408a49a151692cf629c", + "protein_translation": "MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR", + "protein_translation_length": 522, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002501" + ], + [ + "gene_synonym", + "ECK0722" + ], + [ + "gene_synonym", + "EcoGene:EG10174" + ], + [ + "gene_synonym", + "GI:16128709" + ], + [ + "gene_synonym", + "GeneID:945347" + ], + [ + "gene_synonym", + "JW0723" + ], + [ + "gene_synonym", + "NP_415262.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK2" + ], + [ + "gene_synonym", + "b0734" + ], + [ + "gene_synonym", + "cydB" + ] + ], + "dna_sequence": "ATGATCGATTATGAAGTATTGCGTTTTATCTGGTGGCTGCTGGTTGGCGTTCTGCTGATTGGTTTTGCAGTCACTGACGGTTTCGACATGGGGGTGGGCATGCTCACCCGTTTCCTCGGTCGTAACGACACCGAGCGTCGAATTATGATTAACTCCATTGCACCACACTGGGACGGTAACCAGGTTTGGCTGATCACCGCGGGCGGCGCACTCTTTGCTGCCTGGCCGATGGTCTATGCCGCTGCGTTCTCCGGCTTCTATGTGGCGATGATCCTCGTGCTGGCGTCTTTGTTCTTCCGTCCGGTCGGTTTTGACTACCGCTCCAAGATTGAAGAAACCCGCTGGCGTAACATGTGGGACTGGGGCATCTTCATTGGTAGCTTCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTACTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCAACCTATCTGCAAATGCGTACCGTGGGCGAACTGCACCTGCGTACCCGTGCAACGGCTCAGGTGGCTGCGCTGGTGACACTGGTCTGTTTCGCACTGGCTGGCGTATGGGTGATGTACGGTATCGATGGTTATGTCGTGAAATCGACAATGGACCATTACGCAGCCTCTAACCCACTGAATAAAGAAGTGGTTCGTGAAGCTGGCGCATGGCTGGTTAACTTCAACAACACGCCAATTCTGTGGGCTATTCCGGCACTGGGTGTGGTTCTGCCGCTGCTGACCATCCTGACTGCACGTATGGATAAAGCCGCGTGGGCGTTTGTGTTCTCCTCCCTGACGCTGGCCTGCATCATCCTGACAGCCGGTATCGCAATGTTCCCGTTTGTGATGCCGTCCAGCACCATGATGAACGCAAGTCTGACAATGTGGGATGCAACTTCCAGCCAGCTGACGCTTAACGTCATGACCTGGGTTGCGGTGGTTCTGGTACCGATCATTCTGCTCTACACCGCCTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAA", + "dna_sequence_length": 1140, + "functions": [ + "cytochrome d terminal oxidase, subunit II" + ], + "id": "CDS_722", + "location": [ + [ + "NC_000913", + 773042, + "+", + 1140 + ] + ], + "md5": "dcfcfbb83b241d353c002191d476876a", + "parent_gene": "", + "protein_md5": "b9f03a52e78ffa0c5f3d4d4301c34388", + "protein_translation": "MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285036" + ], + [ + "gene_synonym", + "ECK0723" + ], + [ + "gene_synonym", + "EcoGene:EG14329" + ], + [ + "gene_synonym", + "GI:94541102" + ], + [ + "gene_synonym", + "GeneID:1450246" + ], + [ + "gene_synonym", + "JW0724" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56100" + ], + [ + "gene_synonym", + "YP_588444.1" + ], + [ + "gene_synonym", + "b4515" + ], + [ + "gene_synonym", + "cydX" + ], + [ + "gene_synonym", + "ybgT" + ] + ], + "dna_sequence": "ATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGA", + "dna_sequence_length": 114, + "functions": [ + "cytochrome d (bd-I) ubiquinol oxidase subunit X" + ], + "id": "CDS_723", + "location": [ + [ + "NC_000913", + 774196, + "+", + 114 + ] + ], + "md5": "ad9aeb5d808f0a04ff22037366fbfcd1", + "parent_gene": "", + "protein_md5": "9e441c32db8af40efbbc54336b0dd9dc", + "protein_translation": "MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI", + "protein_translation_length": 37, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002505" + ], + [ + "gene_synonym", + "ECK0724" + ], + [ + "gene_synonym", + "EcoGene:EG12395" + ], + [ + "gene_synonym", + "GI:16128710" + ], + [ + "gene_synonym", + "GeneID:945326" + ], + [ + "gene_synonym", + "JW0725" + ], + [ + "gene_synonym", + "NP_415263.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV0" + ], + [ + "gene_synonym", + "b0735" + ], + [ + "gene_synonym", + "ybgE" + ] + ], + "dna_sequence": "ATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAA", + "dna_sequence_length": 294, + "functions": [ + "putative inner membrane protein in cydABX-ybgE operon" + ], + "id": "CDS_724", + "location": [ + [ + "NC_000913", + 774309, + "+", + 294 + ] + ], + "md5": "63f4236ac48bfcacc62de96050e7fa11", + "parent_gene": "", + "protein_md5": "1ed5362504934d484cbe923df0583e6c", + "protein_translation": "MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002508" + ], + [ + "gene_synonym", + "ECK0725" + ], + [ + "gene_synonym", + "EcoGene:EG11110" + ], + [ + "gene_synonym", + "GI:16128711" + ], + [ + "gene_synonym", + "GeneID:948907" + ], + [ + "gene_synonym", + "JW0726" + ], + [ + "gene_synonym", + "NP_415264.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Z3" + ], + [ + "gene_synonym", + "b0736" + ], + [ + "gene_synonym", + "ybgC" + ] + ], + "dna_sequence": "GTGAATACAACGCTGTTTCGATGGCCGGTTCGCGTCTACTATGAAGATACCGATGCCGGTGGTGTGGTGTACCACGCCAGTTACGTCGCTTTTTATGAAAGAGCACGCACAGAGATGCTGCGTCATCATCACTTCAGTCAGCAGGCGCTGATGGCTGAACGCGTTGCCTTTGTGGTACGTAAAATGACGGTGGAATATTACGCACCTGCGCGGCTCGACGATATGCTCGAAATACAGACTGAAATAACATCAATGCGTGGCACCTCTTTGGTTTTCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCACTCAAAATGAAGCCTCGTGCGCTTCCCAAGTCTATTGTCGCGGAGTTTAAGCAGTGA", + "dna_sequence_length": 405, + "functions": [ + "acyl-CoA thioester hydrolase" + ], + "id": "CDS_725", + "location": [ + [ + "NC_000913", + 774752, + "+", + 405 + ] + ], + "md5": "77ba748981e16db2bb34e857151cf51c", + "parent_gene": "", + "protein_md5": "ecdb1c0c5b5d60d6db0a714840aed4ee", + "protein_translation": "MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002511" + ], + [ + "gene_synonym", + "ECK0726" + ], + [ + "gene_synonym", + "EcoGene:EG11010" + ], + [ + "gene_synonym", + "GI:16128712" + ], + [ + "gene_synonym", + "GeneID:948900" + ], + [ + "gene_synonym", + "JW0727" + ], + [ + "gene_synonym", + "NP_415265.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU9" + ], + [ + "gene_synonym", + "b0737" + ], + [ + "gene_synonym", + "fii" + ], + [ + "gene_synonym", + "tolP" + ], + [ + "gene_synonym", + "tolQ" + ] + ], + "dna_sequence": "GTGACTGACATGAATATCCTTGATTTGTTCCTGAAGGCTAGCCTTCTGGTTAAACTTATCATGTTGATTTTGATTGGTTTTTCAATCGCATCTTGGGCCATTATTATCCAGCGGACCCGTATTCTTAACGCAGCGGCGCGCGAAGCCGAAGCGTTTGAAGATAAATTCTGGTCTGGAATCGAACTCTCTCGCCTCTATCAAGAGAGCCAGGGGAAACGGGATAATCTGACTGGTTCGGAACAAATCTTTTACAGCGGGTTCAAAGAGTTTGTGCGCCTGCATCGTGCCAATAGCCATGCGCCGGAAGCCGTAGTGGAAGGGGCGTCGCGTGCTATGCGTATCTCCATGAACCGTGAACTTGAAAATCTGGAAACGCACATTCCGTTCCTCGGTACGGTTGGCTCCATCAGCCCGTATATTGGTCTGTTTGGTACGGTCTGGGGGATCATGCACGCCTTTATCGCCCTCGGGGCGGTAAAACAAGCAACACTGCAAATGGTTGCGCCCGGTATCGCAGAAGCGTTGATTGCGACTGCAATTGGTCTGTTTGCCGCTATCCCGGCAGTTATGGCCTACAACCGCCTCAACCAGCGCGTAAACAAACTGGAACTGAATTACGACAACTTTATGGAAGAGTTTACCGCGATTCTGCACCGCCAGGCGTTTACCGTTAGCGAGAGCAACAAGGGGTAA", + "dna_sequence_length": 693, + "functions": [ + "membrane spanning protein in TolA-TolQ-TolR complex" + ], + "id": "CDS_726", + "location": [ + [ + "NC_000913", + 775153, + "+", + 693 + ] + ], + "md5": "c9831e456cafa21cf8b6321deda8dd36", + "parent_gene": "", + "protein_md5": "92201b01b3e071e67ec2380a4f04f42d", + "protein_translation": "MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002513" + ], + [ + "gene_synonym", + "ECK0727" + ], + [ + "gene_synonym", + "EcoGene:EG11011" + ], + [ + "gene_synonym", + "GI:16128713" + ], + [ + "gene_synonym", + "GeneID:945328" + ], + [ + "gene_synonym", + "JW0728" + ], + [ + "gene_synonym", + "NP_415266.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABV6" + ], + [ + "gene_synonym", + "b0738" + ], + [ + "gene_synonym", + "tolR" + ] + ], + "dna_sequence": "ATGGCCAGAGCGCGTGGACGAGGTCGTCGCGATCTCAAGTCCGAAATCAACATTGTACCGTTGCTGGACGTACTGCTGGTGCTGTTGCTGATCTTTATGGCGACAGCGCCCATCATCACCCAGAGCGTGGAGGTCGATCTGCCAGACGCTACTGAATCACAGGCGGTGAGCAGTAACGATAATCCGCCAGTGATTGTTGAAGTGTCTGGTATTGGTCAGTACACCGTGGTGGTTGAGAAAGATCGCCTGGAGCGTTTACCACCAGAGCAGGTGGTGGCGGAAGTGTCCAGCCGTTTCAAGGCCAACCCGAAAACGGTCTTTCTGATCGGTGGCGCAAAAGATGTGCCTTACGATGAAATAATTAAAGCACTGAACTTGTTACATAGTGCGGGTGTGAAATCGGTTGGTTTAATGACGCAGCCTATCTAA", + "dna_sequence_length": 429, + "functions": [ + "membrane spanning protein in TolA-TolQ-TolR complex" + ], + "id": "CDS_727", + "location": [ + [ + "NC_000913", + 775849, + "+", + 429 + ] + ], + "md5": "b53384577a13f7549cab7ec29f913311", + "parent_gene": "", + "protein_md5": "029ef8d31b6e4eba21b7bb703a4276ae", + "protein_translation": "MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002515" + ], + [ + "gene_synonym", + "ECK0728" + ], + [ + "gene_synonym", + "EcoGene:EG11007" + ], + [ + "gene_synonym", + "GI:16128714" + ], + [ + "gene_synonym", + "GeneID:946625" + ], + [ + "gene_synonym", + "JW0729" + ], + [ + "gene_synonym", + "NP_415267.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19934" + ], + [ + "gene_synonym", + "b0739" + ], + [ + "gene_synonym", + "cim" + ], + [ + "gene_synonym", + "excC" + ], + [ + "gene_synonym", + "lky" + ], + [ + "gene_synonym", + "tolA" + ] + ], + "dna_sequence": "GTGTCAAAGGCAACCGAACAAAACGACAAGCTCAAGCGGGCGATAATTATTTCAGCAGTGCTGCATGTCATCTTATTTGCGGCGCTGATCTGGAGTTCGTTCGATGAGAATATAGAAGCTTCAGCCGGAGGCGGCGGTGGTTCGTCCATCGACGCTGTCATGGTTGATTCAGGTGCGGTAGTTGAGCAGTACAAACGCATGCAAAGCCAGGAATCAAGCGCGAAGCGTTCTGATGAACAGCGCAAGATGAAGGAACAGCAGGCTGCTGAAGAACTGCGTGAGAAACAAGCGGCTGAACAGGAACGCCTGAAGCAACTTGAGAAAGAGCGGTTAGCGGCTCAGGAGCAGAAAAAGCAGGCTGAAGAAGCCGCAAAACAGGCCGAGTTAAAGCAGAAGCAAGCTGAAGAGGCGGCAGCGAAAGCGGCGGCAGATGCTAAAGCGAAGGCCGAAGCAGATGCTAAAGCTGCGGAAGAAGCAGCGAAGAAAGCGGCTGCAGACGCAAAGAAAAAAGCAGAAGCAGAAGCCGCCAAAGCCGCAGCCGAAGCGCAGAAAAAAGCCGAGGCAGCCGCTGCGGCACTGAAGAAGAAAGCGGAAGCGGCAGAAGCAGCTGCAGCTGAAGCAAGAAAGAAAGCGGCAACTGAAGCTGCTGAAAAAGCCAAAGCAGAAGCTGAGAAGAAAGCGGCTGCTGAAAAGGCTGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCAGCTGAAAAAGCCGCTGCAGCAAAAGCGGCCGCAGAGGCAGATGATATTTTCGGTGAGCTAAGCTCTGGTAAGAATGCACCGAAAACGGGGGGAGGGGCGAAAGGGAACAATGCTTCGCCTGCCGGGAGTGGTAATACTAAAAACAATGGCGCATCAGGGGCCGATATCAATAACTATGCCGGGCAGATTAAATCTGCTATCGAAAGTAAGTTCTATGACGCATCGTCCTATGCAGGCAAAACCTGTACGCTGCGCATAAAACTGGCACCCGATGGTATGTTACTGGATATCAAACCTGAAGGTGGCGATCCCGCACTTTGTCAGGCTGCGTTGGCAGCAGCTAAACTTGCGAAGATCCCGAAACCACCAAGCCAGGCAGTATATGAAGTGTTCAAAAACGCGCCATTGGACTTCAAACCGTAA", + "dna_sequence_length": 1266, + "functions": [ + "membrane anchored protein in TolA-TolQ-TolR complex" + ], + "id": "CDS_728", + "location": [ + [ + "NC_000913", + 776342, + "+", + 1266 + ] + ], + "md5": "2fdba2d94f25f4932ea0c173329e2902", + "parent_gene": "", + "protein_md5": "9fc42cc242fb3c0abb0c5f8ff9cd31b0", + "protein_translation": "MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKAEAEAAKAAAEAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAKAEAEKKAAAEKAAADKKAAAEKAAADKKAAEKAAAEKAAADKKAAAEKAAADKKAAAAKAAAEKAAAAKAAAEADDIFGELSSGKNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAGKTCTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFKP", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002517" + ], + [ + "gene_synonym", + "ECK0729" + ], + [ + "gene_synonym", + "EcoGene:EG11008" + ], + [ + "gene_synonym", + "GI:16128715" + ], + [ + "gene_synonym", + "GeneID:945429" + ], + [ + "gene_synonym", + "JW5100" + ], + [ + "gene_synonym", + "NP_415268.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A855" + ], + [ + "gene_synonym", + "b0740" + ], + [ + "gene_synonym", + "tolB" + ] + ], + "dna_sequence": "ATGAAGCAGGCATTACGAGTAGCATTTGGTTTTCTCATACTGTGGGCATCAGTTCTGCATGCTGAAGTCCGCATTGTGATCGACAGCGGTGTAGATTCCGGTCGTCCTATTGGTGTTGTTCCTTTCCAGTGGGCGGGGCCTGGTGCGGCACCTGAAGATATTGGCGGCATCGTTGCTGCTGACTTGCGTAACAGCGGTAAATTTAATCCGTTAGATCGCGCTCGTCTGCCACAGCAGCCGGGTAGTGCGCAGGAAGTACAACCAGCTGCATGGTCCGCACTGGGCATTGACGCTGTAGTTGTCGGTCAGGTCACTCCGAATCCGGATGGTTCTTACAATGTTGCTTATCAACTTGTTGACACTGGCGGCGCACCGGGTACTGTACTTGCTCAGAACTCGTACAAAGTGAACAAGCAGTGGCTGCGTTATGCTGGTCATACCGCCAGTGATGAAGTGTTTGAAAAACTGACCGGCATTAAAGGTGCGTTCCGTACTCGTATTGCCTACGTTGTTCAGACCAACGGCGGTCAGTTCCCGTATGAACTGCGCGTATCTGACTATGACGGTTACAACCAGTTTGTCGTTCACCGTTCACCGCAGCCGCTGATGTCTCCGGCGTGGTCACCAGACGGTTCTAAACTGGCTTATGTGACCTTCGAAAGCGGTCGTTCCGCGCTGGTTATTCAGACGCTGGCAAATGGCGCTGTACGTCAGGTGGCTTCATTCCCGCGTCACAACGGTGCACCTGCATTCTCGCCAGACGGCAGCAAACTGGCATTCGCCTTGTCGAAAACCGGTAGTCTGAACCTGTACGTAATGGATTTGGCTTCTGGTCAGATCCGCCAGGTGACTGATGGTCGCAGTAACAATACCGAACCGACCTGGTTCCCGGATAGCCAGAACCTGGCATTTACTTCTGACCAGGCCGGTCGTCCGCAGGTTTATAAAGTGAATATCAACGGCGGTGCGCCACAACGTATTACCTGGGAAGGTTCGCAGAACCAGGATGCGGATGTCAGCAGCGACGGTAAATTTATGGTAATGGTCAGCTCCAATGGTGGGCAGCAGCACATTGCCAAACAAGATCTGGCAACGGGAGGCGTACAAGTTCTGTCGTCCACGTTCCTGGATGAAACGCCAAGTCTGGCACCTAACGGCACTATGGTAATCTACAGCTCTTCTCAGGGGATGGGATCCGTGCTGAATTTGGTTTCTACAGATGGGCGTTTCAAAGCGCGTCTTCCGGCAACTGATGGACAGGTCAAATTCCCTGCCTGGTCGCCGTATCTGTGA", + "dna_sequence_length": 1293, + "functions": [ + "periplasmic protein" + ], + "id": "CDS_729", + "location": [ + [ + "NC_000913", + 777740, + "+", + 1293 + ] + ], + "md5": "c907993ad2e02d2a8a5c170c8524203f", + "parent_gene": "", + "protein_md5": "5506f1e2c28b9da3d0e59cb3d8ba2457", + "protein_translation": "MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002521" + ], + [ + "gene_synonym", + "ECK0730" + ], + [ + "gene_synonym", + "EcoGene:EG10684" + ], + [ + "gene_synonym", + "GI:16128716" + ], + [ + "gene_synonym", + "GeneID:945004" + ], + [ + "gene_synonym", + "JW0731" + ], + [ + "gene_synonym", + "NP_415269.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A912" + ], + [ + "gene_synonym", + "b0741" + ], + [ + "gene_synonym", + "excC" + ], + [ + "gene_synonym", + "pal" + ] + ], + "dna_sequence": "ATGCAACTGAACAAAGTGCTGAAAGGGCTGATGATTGCTCTGCCTGTTATGGCAATTGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGCGGCAACGGCAACATGTCTTCCGAAGAGCAGGCTCGTCTGCAAATGCAACAGCTGCAGCAGAACAACATCGTTTACTTCGATCTGGACAAGTACGATATCCGTTCTGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCAGATCTCCATCGTTTCTTACGGTAAAGAAAAACCTGCAGTACTGGGTCATGACGAAGCGGCATACTCCAAAAACCGTCGTGCGGTACTGGTTTACTAA", + "dna_sequence_length": 522, + "functions": [ + "peptidoglycan-associated outer membrane lipoprotein" + ], + "id": "CDS_730", + "location": [ + [ + "NC_000913", + 779067, + "+", + 522 + ] + ], + "md5": "f47ba033cc74f2115c27c6b54ad32d87", + "parent_gene": "", + "protein_md5": "90744e2fc74900a7418e43396073931e", + "protein_translation": "MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002523" + ], + [ + "gene_synonym", + "ECK0731" + ], + [ + "gene_synonym", + "EcoGene:EG12854" + ], + [ + "gene_synonym", + "GI:16128717" + ], + [ + "gene_synonym", + "GeneID:947227" + ], + [ + "gene_synonym", + "JW0732" + ], + [ + "gene_synonym", + "NP_415270.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45955" + ], + [ + "gene_synonym", + "b0742" + ], + [ + "gene_synonym", + "ybgF" + ] + ], + "dna_sequence": "ATGAGCAGTAACTTCAGACATCAACTATTGAGTCTGTCGTTACTGGTTGGTATAGCGGCCCCCTGGGCCGCTTTTGCTCAGGCACCAATCAGTAGTGTCGGCTCAGGCTCGGTCGAAGACCGCGTCACTCAACTTGAGCGTATTTCTAATGCTCACAGCCAGCTTTTAACCCAACTCCAGCAACAACTTTCTGATAATCAATCCGATATTGATTCCCTGCGTGGTCAGATTCAGGAAAATCAGTATCAACTGAATCAGGTCGTGGAGCGGCAAAAGCAGATCCTGTTGCAGATCGACAGCCTCAGCAGCGGTGGTGCAGCGGCGCAATCAACCAGCGGCGATCAAAGCGGTGCGGCGGCATCAACGACGCCGACAGCTGATGCTGGTACTGCGAATGCTGGCGCGCCGGTGAAAAGCGGTAATGCAAACACGGATTACAATGCAGCTATTGCGCTGGTGCAGGATAAATCCCGCCAGGATGACGCAATGGTGGCATTTCAGAATTTCATCAAAAATTACCCTGATTCAACTTACCTGCCAAACGCCAATTATTGGCTGGGTCAGTTAAACTACAACAAGGGTAAAAAAGATGATGCGGCGTACTATTTTGCTTCGGTAGTGAAAAACTATCCGAAGTCACCAAAGGCTGCAGATGCGATGTTTAAAGTCGGCGTCATCATGCAGGACAAAGGTGACACCGCAAAAGCGAAAGCCGTATACCAGCAGGTTATCAGTAAATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAA", + "dna_sequence_length": 792, + "functions": [ + "periplasmic TolA-binding protein" + ], + "id": "CDS_731", + "location": [ + [ + "NC_000913", + 779598, + "+", + 792 + ] + ], + "md5": "b451e60394173f84e4bc62a21413be06", + "parent_gene": "", + "protein_md5": "624185469356318cd3fed6830db6d92a", + "protein_translation": "MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTADAGTANAGAPVKSGNANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002541" + ], + [ + "gene_synonym", + "ECK0739" + ], + [ + "gene_synonym", + "EcoGene:EG10630" + ], + [ + "gene_synonym", + "GI:16128718" + ], + [ + "gene_synonym", + "GeneID:945351" + ], + [ + "gene_synonym", + "JW0733" + ], + [ + "gene_synonym", + "NP_415271.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11458" + ], + [ + "gene_synonym", + "b0750" + ], + [ + "gene_synonym", + "nadA" + ], + [ + "gene_synonym", + "nicA" + ] + ], + "dna_sequence": "ATGAGCGTAATGTTTGATCCAGACACGGCGATTTATCCTTTCCCCCCGAAGCCGACGCCGTTAAGCATTGATGAAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTATGGGAGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTACTGGAAGCACCAACCGCAGGTGAGGGTGCAACCTGCCGCAGCTGCGCGCATTGTCCGTGGATGGCCATGAATGGCCTTCAGGCCATCGCAGAGGCATTAGAACAGGAAGGAAGCAATCACGAGGTTCATGTTGATGAAAGGCTGCGAGAGAGGGCGCTGGTGCCGCTCAATCGTATGCTGGATTTTGCGGCTACACTACGTGGATAA", + "dna_sequence_length": 1044, + "functions": [ + "quinolinate synthase, subunit A" + ], + "id": "CDS_732", + "location": [ + [ + "NC_000913", + 782085, + "+", + 1044 + ] + ], + "md5": "914c0bcb74a4a6a194a95bacea757b45", + "parent_gene": "", + "protein_md5": "1c41427b681785fd1d7be801c76228b7", + "protein_translation": "MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVMVAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPDKELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVPLNRMLDFAATLRG", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002547" + ], + [ + "gene_synonym", + "ECK0740" + ], + [ + "gene_synonym", + "EcoGene:EG11700" + ], + [ + "gene_synonym", + "GI:16128719" + ], + [ + "gene_synonym", + "GeneID:945350" + ], + [ + "gene_synonym", + "JW0734" + ], + [ + "gene_synonym", + "NP_415272.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK2" + ], + [ + "gene_synonym", + "b0751" + ], + [ + "gene_synonym", + "pnuC" + ] + ], + "dna_sequence": "ATGGATTTTTTTAGTGTGCAGAATATCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGCCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTCTGATGACGGTATTTATCAATCCGGTGTTTGCATTTTTGACCCGCGTGGCAGTCATGATCATGCAAGCATTAGGATTACAGGTTGTGATGCCTGAACTGCAACCGGACGCTTTCCCGTTCTGGGATTCATGCATGATGGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAA", + "dna_sequence_length": 720, + "functions": [ + "nicotinamide riboside transporter" + ], + "id": "CDS_733", + "location": [ + [ + "NC_000913", + 783166, + "+", + 720 + ] + ], + "md5": "af48a354bda491a6a249fa98e21ed9fb", + "parent_gene": "", + "protein_md5": "7dac8f6d27e12e2898c7091e01d2900f", + "protein_translation": "MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFPFWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002549" + ], + [ + "gene_synonym", + "ECK0741" + ], + [ + "gene_synonym", + "EcoGene:EG13662" + ], + [ + "gene_synonym", + "GI:16128720" + ], + [ + "gene_synonym", + "GeneID:945348" + ], + [ + "gene_synonym", + "JW0735" + ], + [ + "gene_synonym", + "NP_415273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75757" + ], + [ + "gene_synonym", + "b0752" + ], + [ + "gene_synonym", + "ybgR" + ], + [ + "gene_synonym", + "zitB" + ] + ], + "dna_sequence": "ATGGCGCACTCACACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATGCTTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTCGCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGTGGCTGGGTTGCTGGCAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAAAAACCTCAACGTACGAGCAGCGGCACTGCATGTGCTCGGGGACCTGCTGGGTTCGGTTGGGGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGACACCTGCTGACCCCATTCTCTCGATACTGGTGTCGCTTCTGGTTCTGCGTAGCGCGTGGCGACTGTTGAAAGATAGCGTGAATGAATTACTTGAAGGTGCACCGGTATCGCTGGATATCGCTGAACTGAAGCGTCGTATGTGCCGGGAAATCCCGGAAGTCCGCAATGTGCACCATGTACATGTATGGATGGTAGGCGAGAAGCCGGTGATGACGTTGCATGTGCAGGTGATCCCGCCACACGATCACGATGCCTTGTTGGATCAGATCCAACACTACCTGATGGATCACTATCAGATTGAGCACGCCACCATTCAGATGGAATATCAACCTTGTCATGGGCCAGACTGCCACCTGAATGAAGGGGTGTCTGGCCATTCACATCATCACCATTAA", + "dna_sequence_length": 942, + "functions": [ + "zinc efflux system" + ], + "id": "CDS_734", + "location": [ + [ + "NC_000913", + 784823, + "-", + 942 + ] + ], + "md5": "05157272ea5a057d4f2a9da7b0983a95", + "parent_gene": "", + "protein_md5": "9ed734d2db599900373bfc93276f57e3", + "protein_translation": "MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002553" + ], + [ + "gene_synonym", + "ECK0742" + ], + [ + "gene_synonym", + "EcoGene:EG13663" + ], + [ + "gene_synonym", + "GI:16128721" + ], + [ + "gene_synonym", + "GeneID:945356" + ], + [ + "gene_synonym", + "JW0736" + ], + [ + "gene_synonym", + "NP_415274.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV6" + ], + [ + "gene_synonym", + "b0753" + ], + [ + "gene_synonym", + "ybgS" + ] + ], + "dna_sequence": "ATGAAAATGACAAAACTGGCCACATTATTTCTGACTGCCACTCTAAGCCTTGCCAGCGGTGCCGCACTGGCTGCCGATAGCGGAGCGCAAACTAATAACGGCCAGGCAAACGCCGCAGCTGATGCGGGCCAGGTAGCCCCTGACGCCCGTGAAAATGTCGCGCCAAATAACGTCGACAATAACGGGGTAAATACCGGTTCTGGCGGCACAATGCTGCATTCGGATGGTTCTTCAATGAACAATGACGGAATGACCAAAGATGAAGAGCACAAGAACACCATGTGCAAAGATGGTCGCTGTCCGGATATCAATAAAAAGGTACAAACCGGTGATGGCATCAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAA", + "dna_sequence_length": 381, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_735", + "location": [ + [ + "NC_000913", + 785317, + "-", + 381 + ] + ], + "md5": "4aa39383edf8fedae79bb2424715a3a9", + "parent_gene": "", + "protein_md5": "a649cce1bf695fe53eecc47f52985976", + "protein_translation": "MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002560" + ], + [ + "gene_synonym", + "ECK0743" + ], + [ + "gene_synonym", + "EcoGene:EG10079" + ], + [ + "gene_synonym", + "GI:16128722" + ], + [ + "gene_synonym", + "GeneID:945605" + ], + [ + "gene_synonym", + "JW0737" + ], + [ + "gene_synonym", + "NP_415275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB91" + ], + [ + "gene_synonym", + "aroG" + ], + [ + "gene_synonym", + "b0754" + ] + ], + "dna_sequence": "ATGAATTATCAGAACGACGATTTACGCATCAAAGAAATCAAAGAGTTACTTCCTCCTGTCGCATTGCTGGAAAAATTCCCCGCTACTGAAAATGCCGCGAATACGGTTGCCCATGCCCGAAAAGCGATCCATAAGATCCTGAAAGGTAATGATGATCGCCTGTTGGTTGTGATTGGCCCATGCTCAATTCATGATCCTGTCGCGGCAAAAGAGTATGCCACTCGCTTGCTGGCGCTGCGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCCCACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTGGCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCACCGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCGGCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCTGCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGCACAGGTGATGATCGATTTCAGCCATGCTAACTCGTCCAAACAATTCAAAAAGCAGATGGATGTTTGTGCTGACGTTTGCCAGCAGATTGCCGGTGGCGAAAAGGCCATTATTGGCGTGATGGTGGAAAGCCATCTGGTGGAAGGCAATCAGAGCCTCGAGAGCGGGGAGCCGCTGGCCTACGGTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAA", + "dna_sequence_length": 1053, + "functions": [ + "3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible" + ], + "id": "CDS_736", + "location": [ + [ + "NC_000913", + 785633, + "+", + 1053 + ] + ], + "md5": "e49d3c50828c2a84613f30ef26db1bc4", + "parent_gene": "", + "protein_md5": "8b4efabd0c5b0f60af7efd20fd31a750", + "protein_translation": "MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002563" + ], + [ + "gene_synonym", + "ECK0744" + ], + [ + "gene_synonym", + "EcoGene:EG11699" + ], + [ + "gene_synonym", + "GI:16128723" + ], + [ + "gene_synonym", + "GeneID:945068" + ], + [ + "gene_synonym", + "JW0738" + ], + [ + "gene_synonym", + "NP_415276.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62707" + ], + [ + "gene_synonym", + "b0755" + ], + [ + "gene_synonym", + "gpm" + ], + [ + "gene_synonym", + "gpmA" + ] + ], + "dna_sequence": "ATGGCTGTAACTAAGCTGGTTCTGGTTCGTCATGGCGAAAGTCAGTGGAACAAAGAAAACCGTTTCACCGGTTGGTACGACGTGGATCTGTCTGAGAAAGGCGTAAGCGAAGCAAAAGCAGCAGGTAAGCTGCTGAAAGAGGAAGGTTACAGCTTTGACTTTGCTTACACTTCTGTGCTGAAACGCGCTATCCATACCCTGTGGAATGTGCTGGACGAACTGGATCAGGCATGGCTGCCCGTTGAGAAATCCTGGAAACTGAACGAACGTCACTACGGTGCGTTGCAGGGTCTGAACAAAGCGGAAACTGCTGAAAAGTATGGCGACGAGCAGGTGAAACAGTGGCGTCGTGGTTTTGCAGTGACTCCGCCGGAACTGACTAAAGATGATGAGCGTTATCCGGGTCACGATCCGCGTTACGCGAAACTGAGCGAGAAAGAACTGCCGCTGACGGAAAGCCTGGCGCTGACCATTGACCGCGTGATCCCTTACTGGAATGAAACTATTCTGCCGCGTATGAAGAGCGGTGAGCGCGTGATCATCGCTGCACACGGTAACTCTTTACGTGCGCTGGTGAAATATCTTGATAACATGAGCGAAGAAGAGATTCTTGAGCTTAATATCCCGACTGGCGTGCCGCTGGTGTATGAGTTCGACGAGAATTTCAAACCGCTGAAACGCTATTATCTGGGTAATGCTGACGAGATCGCAGCGAAAGCAGCGGCGGTTGCAAACCAGGGTAAAGCGAAGTAA", + "dna_sequence_length": 753, + "functions": [ + "phosphoglyceromutase 1" + ], + "id": "CDS_737", + "location": [ + [ + "NC_000913", + 787595, + "-", + 753 + ] + ], + "md5": "053ad48aa5174ad090296fc8a3bb15bb", + "parent_gene": "", + "protein_md5": "b44f939266db7350d7326798f5f7f138", + "protein_translation": "MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKAAAVANQGKAK", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002566" + ], + [ + "gene_synonym", + "ECK0745" + ], + [ + "gene_synonym", + "EcoGene:EG11698" + ], + [ + "gene_synonym", + "GI:16128724" + ], + [ + "gene_synonym", + "GeneID:944943" + ], + [ + "gene_synonym", + "JW0739" + ], + [ + "gene_synonym", + "NP_415277.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C3" + ], + [ + "gene_synonym", + "b0756" + ], + [ + "gene_synonym", + "galM" + ] + ], + "dna_sequence": "GTGCTGAACGAAACTCCCGCACTGGCACCCGATGGTCAGCCGTACCGACTGTTAACTTTGCGTAACAACGCAGGGATGGTAGTCACGCTGATGGACTGGGGTGCGACTTTACTTTCCGCCCGTATTCCGCTTTCCGATGGCAGCGTCCGCGAGGCGCTGCTCGGCTGTGCCAGCCCGGAATGCTATCAGGATCAGGCCGCGTTTCTGGGGGCCTCTATTGGTCGTTATGCCAACCGTATCGCCAATAGCCGTTATACCTTTGACGGTGAAACCGTGACGCTTTCGCCAAGTCAGGGCGTTAACCAGCTGCACGGCGGGCCGGAAGGGTTCGACAAACGTCGCTGGCAGATTGTGAACCAGAACGATCGTCAGGTGCTGTTTGCCCTGAGTTCAGATGATGGTGATCAGGGCTTCCCGGGTAATCTCGGCGCGACGGTGCAATATCGTCTGACCGACGATAACCGTATCTCCATTACTTATCGCGCCACAGTTGATAAACCTTGCCCGGTGAATATGACTAATCACGTCTATTTCAATCTTGACGGCGAGCAGTCTGACGTGCGCAATCACAAGTTGCAGATTCTGGCGGACGAATATCTGCCGGTTGATGAAGGCGGCATTCCGCACGACGGCCTGAAATCTGTCGCCGGAACGTCTTTTGATTTCCGCAGCGCCAAAATCATCGCCAGTGAGTTTCTTGCCGACGACGATCAGCGCAAAGTGAAAGGTTACGATCACGCATTCTTGTTACAGGCCAAAGGCGATGGCAAGAAAGTGGCGGCGCATGTCTGGTCAGCAGATGAAAAATTGCAGCTGAAGGTCTACACCACCGCTCCGGCTCTGCAATTCTACTCCGGCAACTTCCTCGGCGGCACACCGTCGCGGGGAACCGAACCTTACGCCGACTGGCAAGGGCTGGCTCTGGAAAGCGAGTTTCTACCGGACAGCCCGAACCACCCTGAATGGCCGCAACCGGACTGCTTCCTGCGTCCTGGCGAAGAGTATTCCAGCCTGACGGAATATCAGTTTATTGCTGAGTAA", + "dna_sequence_length": 1041, + "functions": [ + "aldose 1-epimerase", + "type-1 mutarotase", + "galactose mutarotase" + ], + "id": "CDS_738", + "location": [ + [ + "NC_000913", + 788837, + "-", + 1041 + ] + ], + "md5": "45583aa92ae3b98237b77cb5fbb2b13d", + "parent_gene": "", + "protein_md5": "3651de6c148701483bd8963d04a47b07", + "protein_translation": "MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002568" + ], + [ + "gene_synonym", + "ECK0746" + ], + [ + "gene_synonym", + "EcoGene:EG10363" + ], + [ + "gene_synonym", + "GI:16128725" + ], + [ + "gene_synonym", + "GeneID:945358" + ], + [ + "gene_synonym", + "JW0740" + ], + [ + "gene_synonym", + "NP_415278.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T3" + ], + [ + "gene_synonym", + "b0757" + ], + [ + "gene_synonym", + "galA" + ], + [ + "gene_synonym", + "galK" + ] + ], + "dna_sequence": "ATGAGTCTGAAAGAAAAAACACAATCTCTGTTTGCCAACGCATTTGGCTACCCTGCCACTCACACCATTCAGGCGCCTGGCCGCGTGAATTTGATTGGTGAACACACCGACTACAACGACGGTTTCGTTCTGCCCTGCGCGATTGATTATCAAACCGTGATCAGTTGTGCACCACGCGATGACCGTAAAGTTCGCGTGATGGCAGCCGATTATGAAAATCAGCTCGACGAGTTTTCCCTCGATGCGCCCATTGTCGCACATGAAAACTATCAATGGGCTAACTACGTTCGTGGCGTGGTGAAACATCTGCAACTGCGTAACAACAGCTTCGGCGGCGTGGACATGGTGATCAGCGGCAATGTGCCGCAGGGTGCCGGGTTAAGTTCTTCCGCTTCACTGGAAGTCGCGGTCGGAACCGTATTGCAGCAGCTTTATCATCTGCCGCTGGACGGCGCACAAATCGCGCTTAACGGTCAGGAAGCAGAAAACCAGTTTGTAGGCTGTAACTGCGGGATCATGGATCAGCTAATTTCCGCGCTCGGCAAGAAAGATCATGCCTTGCTGATCGATTGCCGCTCACTGGGGACCAAAGCAGTTTCCATGCCCAAAGGTGTGGCTGTCGTCATCATCAACAGTAACTTCAAACGTACCCTGGTTGGCAGCGAATACAACACCCGTCGTGAACAGTGCGAAACCGGTGCGCGTTTCTTCCAGCAGCCAGCCCTGCGTGATGTCACCATTGAAGAGTTCAACGCTGTTGCGCATGAACTGGACCCGATCGTGGCAAAACGCGTGCGTCATATACTGACTGAAAACGCCCGCACCGTTGAAGCTGCCAGCGCGCTGGAGCAAGGCGACCTGAAACGTATGGGCGAGTTGATGGCGGAGTCTCATGCCTCTATGCGCGATGATTTCGAAATCACCGTGCCGCAAATTGACACTCTGGTAGAAATCGTCAAAGCTGTGATTGGCGACAAAGGTGGCGTACGCATGACCGGCGGCGGATTTGGCGGCTGTATCGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA", + "dna_sequence_length": 1149, + "functions": [ + "galactokinase" + ], + "id": "CDS_739", + "location": [ + [ + "NC_000913", + 789979, + "-", + 1149 + ] + ], + "md5": "9f573a734e2509e3ad337259946b8f13", + "parent_gene": "", + "protein_md5": "c3a5104c676445d8933210aa5391f2f8", + "protein_translation": "MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002573" + ], + [ + "gene_synonym", + "ECK0747" + ], + [ + "gene_synonym", + "EcoGene:EG10366" + ], + [ + "gene_synonym", + "GI:16128726" + ], + [ + "gene_synonym", + "GeneID:945357" + ], + [ + "gene_synonym", + "JW0741" + ], + [ + "gene_synonym", + "NP_415279.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09148" + ], + [ + "gene_synonym", + "b0758" + ], + [ + "gene_synonym", + "galB" + ], + [ + "gene_synonym", + "galT" + ] + ], + "dna_sequence": "ATGACGCAATTTAATCCCGTTGATCATCCACATCGCCGCTACAACCCGCTCACCGGGCAATGGATTCTGGTTTCACCGCACCGCGCTAAGCGCCCCTGGCAGGGGGCGCAGGAAACGCCAGCCAAACAGGTGTTACCTGCGCACGATCCAGATTGCTTCCTCTGCGCAGGTAATGTGCGGGTGACAGGCGATAAAAACCCCGATTACACCGGGACTTACGTTTTCACTAATGACTTTGCGGCTTTGATGTCTGACACGCCAGATGCGCCAGAAAGTCACGATCCGCTGATGCGTTGCCAGAGCGCGCGCGGCACCAGCCGGGTGATCTGCTTTTCACCGGATCACAGTAAAACGCTGCCAGAGCTCAGCGTTGCAGCATTGACGGAAATCGTCAAAACCTGGCAGGAGCAAACCGCAGAACTGGGGAAAACGTACCCATGGGTGCAGGTTTTTGAAAACAAAGGCGCGGCGATGGGCTGCTCTAACCCGCATCCGCACGGTCAGATTTGGGCAAATAGCTTCCTGCCTAACGAAGCTGAGCGCGAAGACCGCCTGCAAAAAGAATATTTTGCCGAACAGAAATCACCAATGCTGGTGGATTATGTTCAGCGCGAGCTGGCAGACGGTAGCCGTACCGTTGTCGAAACCGAACACTGGTTAGCCGTCGTGCCTTACTGGGCTGCCTGGCCGTTCGAAACGCTACTGCTGCCCAAAGCCCACGTTTTACGGATCACCGATTTGACCGACGCCCAGCGCAGCGATCTGGCGCTGGCGTTGAAAAAGCTGACCAGTCGTTATGACAACCTCTTCCAGTGCTCCTTCCCCTACTCTATGGGCTGGCACGGCGCGCCATTTAATGGCGAAGAGAATCAACACTGGCAGCTGCACGCGCACTTTTATCCGCCTCTGCTGCGCTCCGCCACCGTACGTAAATTTATGGTTGGTTATGAAATGCTGGCAGAGACCCAGCGAGACCTGACCGCAGAACAGGCAGCAGAGCGTTTGCGCGCAGTCAGCGATATCCATTTTCGCGAATCCGGAGTGTAA", + "dna_sequence_length": 1047, + "functions": [ + "galactose-1-phosphate uridylyltransferase" + ], + "id": "CDS_740", + "location": [ + [ + "NC_000913", + 791029, + "-", + 1047 + ] + ], + "md5": "be8324c692f50e9a9d0ea550034e0b2b", + "parent_gene": "", + "protein_md5": "325cb7c5269d14c0d53593362b5dfad8", + "protein_translation": "MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002575" + ], + [ + "gene_synonym", + "ECK0748" + ], + [ + "gene_synonym", + "EcoGene:EG10362" + ], + [ + "gene_synonym", + "GI:49176045" + ], + [ + "gene_synonym", + "GeneID:945354" + ], + [ + "gene_synonym", + "JW0742" + ], + [ + "gene_synonym", + "NP_415280.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09147" + ], + [ + "gene_synonym", + "b0759" + ], + [ + "gene_synonym", + "galD" + ], + [ + "gene_synonym", + "galE" + ] + ], + "dna_sequence": "ATGAGAGTTCTGGTTACCGGTGGTAGCGGTTACATTGGAAGTCATACCTGTGTGCAATTACTGCAAAACGGTCATGATGTCATCATTCTTGATAACCTCTGTAACAGTAAGCGCAGCGTACTGCCTGTTATCGAGCGTTTAGGCGGCAAACATCCAACGTTTGTTGAAGGCGATATTCGTAACGAAGCGTTGATGACCGAGATCCTGCACGATCACGCTATCGACACCGTGATCCACTTCGCCGGGCTGAAAGCCGTGGGCGAATCGGTACAAAAACCGCTGGAATATTACGACAACAATGTCAACGGCACTCTGCGCCTGATTAGCGCCATGCGCGCCGCTAACGTCAAAAACTTTATTTTTAGCTCCTCCGCCACCGTTTATGGCGATCAGCCCAAAATTCCATACGTTGAAAGCTTCCCGACCGGCACACCGCAAAGCCCTTACGGCAAAAGCAAGCTGATGGTGGAACAGATCCTCACCGATCTGCAAAAAGCCCAGCCGGACTGGAGCATTGCCCTGCTGCGCTACTTCAACCCGGTTGGCGCGCATCCGTCGGGCGATATGGGCGAAGATCCGCAAGGCATTCCGAATAACCTGATGCCATACATCGCCCAGGTTGCTGTAGGCCGTCGCGACTCGCTGGCGATTTTTGGTAACGATTATCCGACCGAAGATGGTACTGGCGTACGCGATTACATCCACGTAATGGATCTGGCGGACGGTCACGTCGTGGCGATGGAAAAACTGGCGAACAAGCCAGGCGTACACATCTACAACCTCGGCGCTGGCGTAGGCAACAGCGTGCTGGACGTGGTTAATGCCTTCAGCAAAGCCTGCGGCAAACCGGTTAATTATCATTTTGCACCGCGTCGCGAGGGCGACCTTCCGGCCTACTGGGCGGACGCCAGCAAAGCCGACCGTGAACTGAACTGGCGCGTAACGCGCACACTCGATGAAATGGCGCAGGACACCTGGCACTGGCAGTCACGCCATCCACAGGGATATCCCGATTAA", + "dna_sequence_length": 1017, + "functions": [ + "UDP-galactose-4-epimerase" + ], + "id": "CDS_741", + "location": [ + [ + "NC_000913", + 792055, + "-", + 1017 + ] + ], + "md5": "7e3d6a38ca1d96b862feac115d82ca46", + "parent_gene": "", + "protein_md5": "4b77aa7d76c7b1946ca0d8ca6aa05562", + "protein_translation": "MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002582" + ], + [ + "gene_synonym", + "ECK0749" + ], + [ + "gene_synonym", + "EcoGene:EG11677" + ], + [ + "gene_synonym", + "GI:16128728" + ], + [ + "gene_synonym", + "GeneID:945368" + ], + [ + "gene_synonym", + "JW0743" + ], + [ + "gene_synonym", + "NP_415281.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31060" + ], + [ + "gene_synonym", + "b0760" + ], + [ + "gene_synonym", + "chlD" + ], + [ + "gene_synonym", + "modF" + ], + [ + "gene_synonym", + "phrA" + ] + ], + "dna_sequence": "ATGTCATCGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGACACAAAAACGCTGCAATTGCCTCAGCTAACGTTAAACGCGGGTGATAGTTGGGCGTTTGTCGGTTCGAATGGAAGCGGGAAATCGGCCCTGGCCCGCGCGCTGGCGGGGGAACTTCCGCTTTTGAAAGGTGAACGGCAAAGCCAGTTTTCCCACATCACTCGTCTCTCCTTCGAGCAATTGCAAAAACTCGTCAGCGACGAATGGCAGCGGAATAACACCGATATGCTCGGCCCTGGCGAAGATGACACCGGACGCACTACGGCTGAGATCATTCAGGATGAAGTAAAGGATGCACCGCGTTGCATGCAACTGGCGCAGCAGTTCGGTATTACCGCCCTCCTCGACCGACGCTTTAAATACCTTTCCACTGGCGAGACGCGAAAAACCCTGCTGTGTCAGGCGCTGATGTCGGAGCCTGACTTGTTGATTCTTGATGAGCCGTTCGATGGCCTGGATGTTGCCTCACGTCAGCAGCTGGCTGAGCGACTCGCCTCGTTACATCAGTCCGGTATTACTCTGGTACTGGTGCTCAATCGCTTCGATGAGATCCCGGAGTTTGTCCAGTTTGCTGGCGTGCTGGCGGATTGCACGTTAGCGGAAACTGGCGCTAAAGAGGAACTGCTCCAACAAGCACTCGTCGCGCAACTGGCGCATAGTGAACAGCTTGAAGGTGTGCAACTGCCGGAGCCGGATGAACCTTCAGCACGTCACGCCTTACCCGCCAACGAACCGCGCATTGTGCTGAACAATGGCGTGGTTTCTTATAACGATCGCCCCATTCTTAATAACCTTAGCTGGCAGGTGAATCCAGGCGAACACTGGCAAATTGTCGGGCCAAATGGTGCAGGAAAATCGACGTTATTAAGCCTGGTTACTGGCGATCATCCGCAAGGTTACAGCAACGATTTGACGCTTTTCGGACGACGTCGCGGCAGCGGCGAAACCATCTGGGATATCAAAAAGCATATCGGTTACGTCAGCAGTAGTTTGCATCTGGATTACCGGGTCAGCACTACCGTGCGTAATGTGATTCTTTCTGGCTATTTTGATTCGATTGGCATTTATCAGGCCGTTTCGGATCGCCAGCAAAAACTGGTGCAGCAGTGGCTGGATATTCTCGGCATTGATAAACGCACGGCTGACGCTCCGTTCCATAGTCTTTCCTGGGGACAGCAGCGTCTGGCGCTGATTGTCCGCGCACTGGTGAAACATCCGACGTTGCTTATTCTCGATGAACCACTACAGGGGCTTGATCCGCTGAATCGCCAGCTTATCCGCCGTTTTGTTGATGTGCTGATTAGCGAAGGTGAAACGCAATTGTTGTTTGTTTCGCACCACGCTGAAGATGCGCCTGCCTGTATTACCCATCGTCTTGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGA", + "dna_sequence_length": 1473, + "functions": [ + "molybdate ABC transporter ATPase" + ], + "id": "CDS_742", + "location": [ + [ + "NC_000913", + 793788, + "-", + 1473 + ] + ], + "md5": "03d39d7d16f0632840b1815041b2ab21", + "parent_gene": "", + "protein_md5": "cbe3f5ba45f669738336d39fe7a1a1b8", + "protein_translation": "MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY", + "protein_translation_length": 490, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002585" + ], + [ + "gene_synonym", + "ECK0750" + ], + [ + "gene_synonym", + "EcoGene:EG13227" + ], + [ + "gene_synonym", + "GI:16128729" + ], + [ + "gene_synonym", + "GeneID:945366" + ], + [ + "gene_synonym", + "JW0744" + ], + [ + "gene_synonym", + "NP_415282.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G8" + ], + [ + "gene_synonym", + "b0761" + ], + [ + "gene_synonym", + "chlD" + ], + [ + "gene_synonym", + "modE" + ], + [ + "gene_synonym", + "modR" + ] + ], + "dna_sequence": "ATGCAGGCCGAAATCCTTCTCACCCTTAAGCTCCAACAAAAATTATTCGCCGACCCGCGCCGCATTTCGCTACTAAAACACATTGCGCTTTCCGGTTCCATTAGCCAGGGAGCGAAAGATGCCGGTATTAGCTATAAAAGCGCCTGGGATGCCATTAACGAGATGAATCAGTTAAGTGAGCATATTCTGGTCGAGCGCGCAACAGGCGGTAAAGGTGGCGGCGGCGCAGTACTGACCCGCTATGGTCAGCGACTGATTCAGCTCTATGACTTACTGGCGCAAATCCAGCAAAAAGCCTTTGATGTGTTAAGTGACGATGACGCCCTGCCGCTGAACAGCCTGCTGGCCGCGATCTCACGTTTTTCACTGCAAACCAGCGCCCGTAACCAGTGGTTCGGTACCATCACCGCCCGCGATCATGATGACGTTCAACAGCATGTTGATGTCTTACTGGCTGACGGAAAAACACGCCTGAAAGTCGCAATTACCGCACAAAGCGGCGCGCGTCTGGGGCTGGATGAAGGCAAAGAAGTGTTGATATTGCTAAAAGCGCCGTGGGTAGGTATTACTCAGGACGAGGCGGTCGCGCAAAACGCTGACAACCAATTACCGGGTATTATTAGTCATATTGAGCGCGGCGCAGAGCAGTGCGAAGTATTAATGGCGCTACCCGACGGGCAAACACTGTGCGCCACAGTGCCGGTAAATGAAGCGACTTCTCTTCAGCAAGGACAGAATGTCACGGCCTACTTTAATGCCGACAGCGTGATTATCGCCACGCTGTGCTAA", + "dna_sequence_length": 789, + "functions": [ + "transcriptional repressor for the molybdenum transport operon modABC" + ], + "id": "CDS_743", + "location": [ + [ + "NC_000913", + 794644, + "-", + 789 + ] + ], + "md5": "b6f80d8f8e47f1017cd2941b52fc3a89", + "parent_gene": "", + "protein_md5": "0b06eab3efde23ce54d4f3d54d8c0318", + "protein_translation": "MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002595" + ], + [ + "gene_synonym", + "ECK0751" + ], + [ + "gene_synonym", + "EcoGene:EG14328" + ], + [ + "gene_synonym", + "GI:16128730" + ], + [ + "gene_synonym", + "GeneID:945365" + ], + [ + "gene_synonym", + "JW5102" + ], + [ + "gene_synonym", + "NP_415283.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAW9" + ], + [ + "gene_synonym", + "acrZ" + ], + [ + "gene_synonym", + "b0762" + ], + [ + "gene_synonym", + "ybhT" + ] + ], + "dna_sequence": "ATGTTAGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGA", + "dna_sequence_length": 150, + "functions": [ + "AcrAB-TolC efflux pump accessory protein, membrane-associated" + ], + "id": "CDS_744", + "location": [ + [ + "NC_000913", + 794773, + "+", + 150 + ] + ], + "md5": "a52050867c34ff3dc9e9090790081d97", + "parent_gene": "", + "protein_md5": "388b7440f751b01deb0d56ef744bb678", + "protein_translation": "MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH", + "protein_translation_length": 49, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002601" + ], + [ + "gene_synonym", + "ECK0752" + ], + [ + "gene_synonym", + "EcoGene:EG12427" + ], + [ + "gene_synonym", + "GI:16128731" + ], + [ + "gene_synonym", + "GeneID:945364" + ], + [ + "gene_synonym", + "JW0746" + ], + [ + "gene_synonym", + "NP_415284.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37329" + ], + [ + "gene_synonym", + "b0763" + ], + [ + "gene_synonym", + "modA" + ] + ], + "dna_sequence": "ATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATGTGGTTTCTTCTTTCGCTTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGTGCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAACATGTTCCCGCTGGCATTTATGCAAAAGAAGCACTGCAAAAACTGGGCGCATGGGATACGCTCTCTCCGAAACTGGCCCCAGCGGAAGATGTTCGTGGGGCGCTGGCGCTGGTCGAACGTAACGAAGCGCCTCTGGGCATTGTCTACGGTTCTGACGCAGTTGCCAGCAAAGGGGTAAAAGTGGTTGCCACCTTCCCGGAAGATTCACATAAAAAAGTGGAATATCCGGTTGCTGTTGTGGAAGGGCATAACAATGCGACAGTGAAAGCATTTTATGATTATCTGAAGGGACCGCAGGCAGCGGAAATCTTTAAACGTTACGGATTTACAATCAAGTAA", + "dna_sequence_length": 774, + "functions": [ + "molybdate ABC transporter periplasmic binding protein", + "chlorate resistance protein" + ], + "id": "CDS_745", + "location": [ + [ + "NC_000913", + 795089, + "+", + 774 + ] + ], + "md5": "887eeafcf4298150754784f75e35ead8", + "parent_gene": "", + "protein_md5": "5d5ac211ab72e23e2d88dc3e1e0850a5", + "protein_translation": "MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002603" + ], + [ + "gene_synonym", + "ECK0753" + ], + [ + "gene_synonym", + "EcoGene:EG10002" + ], + [ + "gene_synonym", + "GI:16128732" + ], + [ + "gene_synonym", + "GeneID:945361" + ], + [ + "gene_synonym", + "JW0747" + ], + [ + "gene_synonym", + "NP_415285.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF01" + ], + [ + "gene_synonym", + "b0764" + ], + [ + "gene_synonym", + "chlJ" + ], + [ + "gene_synonym", + "modB" + ] + ], + "dna_sequence": "ATGATACTGACCGATCCAGAATGGCAGGCAGTTTTATTAAGCCTGAAAGTTTCTTCCCTGGCTGTGCTGTTTAGCCTGCCGTTTGGGATCTTTTTTGCCTGGTTACTGGTGCGTTGCACGTTTCCGGGCAAAGCTCTGCTCGACAGCGTACTGCATCTACCGCTGGTGTTACCGCCCGTGGTCGTCGGTTACTTATTATTAGTTTCGATGGGACGGCGCGGATTTATCGGTGAACGTCTGTATGACTGGTTTGGTATTACCTTCGCCTTTAGCTGGCGCGGCGCGGTTCTCGCTGCCGCCGTCATGTCGTTTCCGCTGATGGTGCGGGCAATTCGTCTGGCGCTGGAAGGGGTTGATGTCAAACTGGAACAGGCCGCAAGAACACTGGGGGCCGGGCGCTGGCGCGTTTTCTTTACTATCACGTTACCGCTGACCTTACCGGGAATTATTGTTGGTACGGTACTGGCTTTTGCTCGTTCTCTCGGTGAGTTTGGTGCAACCATCACCTTTGTGTCGAACATTCCTGGTGAAACGCGAACCATTCCTTCTGCCATGTATACCCTGATCCAGACCCCCGGCGGGGAAAGTGGAGCGGCGAGACTGTGCATTATTTCTATTGCGCTGGCGATGATCTCCCTGTTGATTTCAGAATGGCTGGCCAGAATCAGCCGTGAACGGGCGGGGCGCTAA", + "dna_sequence_length": 690, + "functions": [ + "molybdate ABC transporter permease", + "chlorate resistance protein" + ], + "id": "CDS_746", + "location": [ + [ + "NC_000913", + 795862, + "+", + 690 + ] + ], + "md5": "b7c655bd2dc47793ca79fc50b5d77313", + "parent_gene": "", + "protein_md5": "d21ee2d45d2f1b00d1430aeaf33664ab", + "protein_translation": "MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002605" + ], + [ + "gene_synonym", + "ECK0754" + ], + [ + "gene_synonym", + "EcoGene:EG10152" + ], + [ + "gene_synonym", + "GI:16128733" + ], + [ + "gene_synonym", + "GeneID:945362" + ], + [ + "gene_synonym", + "JW0748" + ], + [ + "gene_synonym", + "NP_415286.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09833" + ], + [ + "gene_synonym", + "b0765" + ], + [ + "gene_synonym", + "chlD" + ], + [ + "gene_synonym", + "modC" + ], + [ + "gene_synonym", + "narD" + ] + ], + "dna_sequence": "ATGCTGGAACTGAATTTTTCCCAGACGTTGGGCAACCATTGCCTGACTATTAATGAAACGCTGCCCGCCAATGGCATCACTGCTATCTTTGGCGTCTCCGGTGCCGGAAAAACTTCGCTGATTAACGCCATCAGTGGACTGACGCGCCCGCAAAAAGGGCGGATTGTCCTCAATGGGCGGGTACTAAATGATGCCGAAAAAGGTATCTGCCTGACGCCGGAAAAGCGTCGCGTTGGCTATGTTTTTCAGGATGCGCGGCTGTTCCCGCATTACAAAGTGCGTGGCAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCTTTTAGGCATTGAACCGTTGCTTGACCGTTTACCAGGCAGCCTGTCCGGAGGCGAAAAACAGCGCGTGGCGATTGGTCGGGCTTTGCTGACAGCACCGGAATTGCTGTTGCTGGATGAACCGCTGGCGTCACTGGATATTCCGCGTAAACGCGAACTGTTGCCTTATCTGCAACGGCTGACACGGGAAATCAACATTCCGATGTTGTATGTCAGCCATTCGCTGGATGAGATCCTCCATCTGGCAGACAGAGTGATGGTACTGGAAAACGGTCAGGTGAAAGCCTTTGGCGCGCTGGAGGAAGTGTGGGGCAGTAGCGTGATGAATCCGTGGCTGCCGAAAGAGCAACAAAGTAGCATTCTGAAAGTGACGGTGCTTGAGCATCATCCGCATTACGCGATGACCGCGCTGGCGCTGGGCGATCAGCATTTGTGGGTCAATAAGCTGGACGAACCGCTGCAAGCTGCGCTACGTATCCGCATTCAGGCTTCCGATGTTTCTCTGGTTTTACAACCGCCGCAGCAAACCAGCATTCGTAACGTATTGCGGGCAAAAGTTGTTAATAGTTATGACGACAACGGCCAGGTGGAAGTGGAACTGGAAGTCGGCGGTAAAACGCTGTGGGCGCGTATCAGCCCGTGGGCCAGGGATGAACTGGCGATCAAACCTGGCCTGTGGCTGTACGCGCAAATTAAAAGTGTGTCGATAACCGCCTGA", + "dna_sequence_length": 1059, + "functions": [ + "molybdate ABC transporter ATPase", + "chlorate resistance protein" + ], + "id": "CDS_747", + "location": [ + [ + "NC_000913", + 796554, + "+", + 1059 + ] + ], + "md5": "3b18dc04a85bdd92e8af5ee1c65bc944", + "parent_gene": "", + "protein_md5": "a6e8614a32fc93e74348ce170275822f", + "protein_translation": "MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002607" + ], + [ + "gene_synonym", + "ECK0755" + ], + [ + "gene_synonym", + "EcoGene:EG11239" + ], + [ + "gene_synonym", + "GI:16128734" + ], + [ + "gene_synonym", + "GeneID:945372" + ], + [ + "gene_synonym", + "JW0749" + ], + [ + "gene_synonym", + "NP_415287.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21829" + ], + [ + "gene_synonym", + "b0766" + ], + [ + "gene_synonym", + "modD" + ], + [ + "gene_synonym", + "ybhA" + ] + ], + "dna_sequence": "ATGACCACACGCGTGATTGCTCTCGACTTAGACGGCACCTTATTGACCCCGAAAAAGACCCTGCTTCCTTCATCGATAGAAGCCCTGGCCCGCGCTCGCGAAGCAGGCTATCAATTAATCATCGTCACAGGTCGCCATCACGTCGCTATTCATCCTTTTTATCAGGCGCTGGCGCTGGATACACCTGCTATTTGCTGTAATGGCACCTATTTGTATGATTATCATGCAAAAACCGTGCTGGAAGCGGACCCAATGCCCGTTATTAAAGCCCTGCAACTCATTGAGATGCTGAATGAACACCACATTCACGGTCTGATGTATGTCGATGATGCAATGGTCTATGAGCACCCGACCGGGCATGTCATTCGCACATCTAACTGGGCGCAAACCCTGCCGCCGGAACAGCGTCCGACTTTCACACAAGTCGCTTCTCTGGCTGAAACGGCGCAACAAGTTAACGCCGTATGGAAGTTCGCCCTGACGCACGATGACCTGCCGCAATTGCAGCATTTTGGTAAGCATGTCGAACATGAACTGGGACTGGAGTGTGAATGGTCCTGGCACGATCAGGTTGATATTGCACGCGGCGGCAACAGCAAAGGTAAACGTTTGACGAAATGGGTTGAGGCGCAAGGTTGGTCGATGGAAAACGTCGTGGCATTCGGCGATAACTTTAATGATATCAGTATGCTGGAAGCCGCTGGTACAGGCGTGGCGATGGGCAACGCCGATGACGCGGTAAAAGCGCGCGCCAACATTGTGATTGGTGATAACACCACCGACAGCATTGCCCAGTTCATTTATAGCCACCTGATTTAA", + "dna_sequence_length": 819, + "functions": [ + "pyridoxal phosphate (PLP) phosphatase" + ], + "id": "CDS_748", + "location": [ + [ + "NC_000913", + 798431, + "-", + 819 + ] + ], + "md5": "6d152b8fd5b1eb95df710340ed881c41", + "parent_gene": "", + "protein_md5": "eb2913f1c00188b09a667b8f22b6235e", + "protein_translation": "MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002611" + ], + [ + "gene_synonym", + "ECK0756" + ], + [ + "gene_synonym", + "EcoGene:EG13231" + ], + [ + "gene_synonym", + "GI:16128735" + ], + [ + "gene_synonym", + "GeneID:946398" + ], + [ + "gene_synonym", + "JW0750" + ], + [ + "gene_synonym", + "NP_415288.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52697" + ], + [ + "gene_synonym", + "b0767" + ], + [ + "gene_synonym", + "blu" + ], + [ + "gene_synonym", + "pgl" + ], + [ + "gene_synonym", + "ybhE" + ] + ], + "dna_sequence": "ATGAAGCAAACAGTTTATATCGCCAGCCCTGAGAGCCAGCAAATTCACGTCTGGAATCTGAATCATGAAGGCGCACTGACGCTGACACAGGTTGTCGATGTGCCGGGGCAGGTGCAGCCGATGGTGGTCAGCCCGGACAAACGTTATCTCTATGTTGGTGTTCGCCCTGAGTTTCGCGTCCTGGCGTATCGTATCGCCCCGGACGATGGCGCACTGACCTTTGCCGCAGAGTCTGCGCTGCCGGGTAGTCCGACGCATATTTCCACCGATCACCAGGGGCAGTTTGTCTTTGTAGGTTCTTACAATGCGGGTAACGTGAGCGTAACGCGTCTGGAAGATGGCCTGCCAGTGGGCGTCGTCGATGTGGTCGAGGGGCTGGACGGTTGCCATTCCGCCAATATCTCACCGGACAACCGTACGCTGTGGGTTCCGGCATTAAAGCAGGATCGCATTTGCCTGTTTACGGTCAGCGATGATGGTCATCTCGTGGCGCAGGACCCTGCGGAAGTGACCACCGTTGAAGGGGCCGGCCCGCGTCATATGGTATTCCATCCAAACGAACAATATGCGTATTGCGTCAATGAGTTAAACAGCTCAGTGGATGTCTGGGAACTGAAAGATCCGCACGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAACGCACACTAA", + "dna_sequence_length": 996, + "functions": [ + "6-phosphogluconolactonase" + ], + "id": "CDS_749", + "location": [ + [ + "NC_000913", + 798586, + "+", + 996 + ] + ], + "md5": "edd638fd58378c43009455ee1501cae7", + "parent_gene": "", + "protein_md5": "5adfc32c620373e38308e89f4358b1d3", + "protein_translation": "MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002613" + ], + [ + "gene_synonym", + "ECK0757" + ], + [ + "gene_synonym", + "EcoGene:EG13230" + ], + [ + "gene_synonym", + "GI:145698233" + ], + [ + "gene_synonym", + "GeneID:944869" + ], + [ + "gene_synonym", + "JW5896" + ], + [ + "gene_synonym", + "NP_415289.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52696" + ], + [ + "gene_synonym", + "b0768" + ], + [ + "gene_synonym", + "ybhD" + ] + ], + "dna_sequence": "ATGAAGCATGAATTATCAAGTATGAAGGCATTTGTCATACTGGCAGAGTCCAGTTCGTTTAACAATGCCGCTAAATTACTCAATATTACGCAACCTGCATTAACGCGAAGAATAAAAAAGATGGAGGAAGATTTACATGTTCAACTATTTGAGCGTACAACTCGCAAGGTTACGTTAACAAAAGCAGGAAAAAGGTTGCTCCCGGAGGCGCGGGAATTAATAAAGAAATTCGATGAAACGCTTTTTAATATTCGTGATATGAATGCTTATCATCGTGGTATGGTGACGTTAGCGTGTATTCCGACCGCAGTATTTTATTTTTTACCGCTGGCAATCGGTAAATTTAATGAGCTGTATCCCAATATTAAAGTGCGGATTCTGGAACAAGGCACGAATAATTGCATGGAATCGGTGCTGTGTAACGAATCAGACTTTGGCATAAACATGAACAACGTCACAAATTCATCCATTGATTTTACCCCACTGGTCAACGAGCCGTTCGTGCTGGCCTGTCGGCGTGACCATCCATTGGCCAAAAAGCAGCTTGTAGAATGGCAGGAGTTAGTGGGTTACAAAATGATTGGCGTACGCTCCTCCAGCGGCAACCGACTGTTGATAGAACAACAGCTGGCCGACAAGCCCTGGAAGCTGGACTGGTTTTACGAAGTGCGTCATCTTTCGACGTCATTAGGACTGGTGGAGGCGGGACTGGGGATTTCGGCGCTTCCTGGCCTGGCAATGCCTCATGCGCCCTATTCTTCGATTATTGGTATCCCATTGGTGGAACCCGTTATACGTCGAACATTGGGAATAATTCGCCGTAAAGATGCCGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAA", + "dna_sequence_length": 954, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_750", + "location": [ + [ + "NC_000913", + 800575, + "-", + 954 + ] + ], + "md5": "daf6b3c9e038e425ac5d5bbe5de89176", + "parent_gene": "", + "protein_md5": "77bbcd0dc6af560cf8a35370040d69ac", + "protein_translation": "MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002618" + ], + [ + "gene_synonym", + "ECK0758" + ], + [ + "gene_synonym", + "EcoGene:EG13664" + ], + [ + "gene_synonym", + "GI:16128737" + ], + [ + "gene_synonym", + "GeneID:945375" + ], + [ + "gene_synonym", + "JW0752" + ], + [ + "gene_synonym", + "NP_415290.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV8" + ], + [ + "gene_synonym", + "b0769" + ], + [ + "gene_synonym", + "ybhH" + ] + ], + "dna_sequence": "ATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTTTGATTGCAGCGACTTCGCCAGTTACTCGCGTACGTATCCGCAACGTCAATACGGGTACGTTCATCGAAGCTGATGTGCAAACGCCAAATGGTGTTGTCGAGTACGAGGGTAGCGCCAGAATTGACGGCGTACCGGGTACTGCCGCACCGGTTGCGCTCACTTTCCTGAATGCCGCTGGAACCAAAACCGGAAAAGTTTTCCCGACTGATAATCAGATTGATTATTTTGACGATGTCCCGGTGACCTGTATCGATATGGCGATGCCAGTCGTCATTATTCCGGCTGAATATCTGGGAAAAACAGGTTATGAATTACCGGCGGAACTGGATGCCGACAAAGCATTATTAGCCCGCATTGAATCTATCCGTCTACAAGCGGGTAAAGCAATGGGCTTAGGTGATGTCAGTAATATGGTTATCCCTAAACCTGTGCTTATTTCTCCAGCGCAGAAAGGCGGGGCAATTAATGTGCGTTATTTTATGCCGCATTCTTGCCATCGCGCGCTGGCGATAACCGGTGCTATTGCTATTTCCAGTAGTTGTGCATTGGAAGGCACCGTCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGA", + "dna_sequence_length": 1053, + "functions": [ + "putative PrpF family isomerase" + ], + "id": "CDS_751", + "location": [ + [ + "NC_000913", + 800759, + "+", + 1053 + ] + ], + "md5": "4b4bade147c723384528e7fb0ada1652", + "parent_gene": "", + "protein_md5": "03b7bff065515b86e5c38cd6729de0b6", + "protein_translation": "MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002621" + ], + [ + "gene_synonym", + "ECK0759" + ], + [ + "gene_synonym", + "EcoGene:EG13665" + ], + [ + "gene_synonym", + "GI:16128738" + ], + [ + "gene_synonym", + "GeneID:945377" + ], + [ + "gene_synonym", + "JW0753" + ], + [ + "gene_synonym", + "NP_415291.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75763" + ], + [ + "gene_synonym", + "b0770" + ], + [ + "gene_synonym", + "ybhI" + ] + ], + "dna_sequence": "ATGAATAAGAAATCGTTATGGAAGCTAATTCTGATATTAGCGATCCCATGTATTATTGGTTTTATGCCAGCTCCGGCAGGATTAAGCGAACTGGCGTGGGTGCTTTTTGGTATTTACCTGGCGGCCATTGTGGGGCTGGTTATCAAGCCTTTCCCGGAACCTGTCGTACTGTTAATTGCCGTTGCTGCCTCAATGGTGGTGGTCGGTAACTTATCCGACGGTGCGTTTAAAACCACCGCCGTATTAAGCGGTTACTCTTCAGGTACCACCTGGCTGGTGTTCTCGGCGTTTACCTTAAGCGCCGCATTTGTGACCACCGGTTTAGGTAAACGTATTGCCTATCTGCTGATTGGTAAAATCGGTAACACCACGCTGGGTCTGGGTTACGTTACGGTATTCCTCGATCTGGTACTGGCTCCGGCAACACCGTCTAACACCGCGCGTGCGGGCGGCATTGTGTTACCGATCATCAACAGCGTGGCGGTGGCTTTGGGGTCCGAACCGGAAAAAAGTCCGCGTCGTGTCGGACATTACCTGATGATGTCCATTTACATGGTCACCAAAACCACCAGCTATATGTTCTTTACCGCAATGGCGGGGAACATTCTGGCGCTGAAAATGATCAACGACATTCTGCACCTGCAAATTAGCTGGGGTGGATGGGCGCTGGCAGCCGGATTGCCGGGCATCATTATGCTGCTGGTCACCCCGCTGGTGATTTACACCATGTATCCACCAGAAATTAAGAAGGTGGATAACAAAACCATCGCTAAAGCGGGCCTTGCCGAACTAGGACCGATGAAAATCCGCGAAAAAATGCTGCTCGGTGTCTTTGTGCTGGCGCTGCTGGGCTGGATTTTCAGTAAGTCTCTGGGGGTTGATGAATCCACCGTGGCAATCGTTGTTATGGCAACCATGCTGCTGCTGGGTATCGTTACCTGGGAAGACGTGGTTAAAAATAAAGGCGGCTGGAATACCTTAATCTGGTACGGCGGTATTATCGGCTTAAGCTCCTTATTATCGAAAGTTAAATTCTTCGAATGGTTAGCTGAAGTCTTTAAAAATAACCTGGCATTTGATGGTCACGGTAACGTTGCTTTCTTCGTTATTATTTTCCTCAGCATTATCGTGCGTTATTTCTTCGCTTCCGGTAGTGCCTATATCGTTGCTATGTTACCGGTATTTGCCATGCTGGCGAACGTCTCCGGCGCACCGTTAATGTTAACCGCGCTGGCACTGTTGTTCTCCAACTCCTATGGCGGCATGGTTACTCACTATGGCGGCGCGGCAGGTCCGGTCATCTTTGGCGTGGGTTATAACGATATTAAATCCTGGTGGTTGGTCGGTGCGGTACTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAA", + "dna_sequence_length": 1434, + "functions": [ + "putative DASS family tricarboxylate or dicarboxylate transporter" + ], + "id": "CDS_752", + "location": [ + [ + "NC_000913", + 801887, + "+", + 1434 + ] + ], + "md5": "42f330863600a36151b6f20f4c2e4586", + "parent_gene": "", + "protein_md5": "ebb61c155b13bb7711af31ae5224e870", + "protein_translation": "MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002626" + ], + [ + "gene_synonym", + "ECK0760" + ], + [ + "gene_synonym", + "EcoGene:EG13666" + ], + [ + "gene_synonym", + "GI:90111167" + ], + [ + "gene_synonym", + "GeneID:945380" + ], + [ + "gene_synonym", + "JW5103" + ], + [ + "gene_synonym", + "NP_415292.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75764" + ], + [ + "gene_synonym", + "b0771" + ], + [ + "gene_synonym", + "ybhJ" + ] + ], + "dna_sequence": "ATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTGGTCTATTCTCTCTTCGCATAATACGTCCGGAAATATGGATAAACTTAAAATTAAGTTTGATTCATTAGCCTCTCACGATATTACCTTTGTTGGTATTGTACAGACCGCTAAAGCGTCCGGTATGGAACGTTTCCCGCTGCCGTATGTGCTGACCAACTGCCATAACTCACTCTGCGCCGTCGGCGGCACTATTAACGGTGATGACCATGTTTTTGGTTTATCGGCGGCCCAGCGTTATGGCGGTATTTTTGTGCCTCCGCATATTGCGGTCATCCATCAATATATGCGTGAGATGATGGCAGGCGGCGGCAAAATGATCCTCGGGTCAGACAGCCACACCCGTTACGGTGCATTAGGGACAATGGCAGTCGGTGAGGGCGGCGGTGAGTTGGTAAAACAGCTGCTTAATGACACCTGGGATATCGACTATCCGGGCGTGGTTGCGGTGCATCTGACCGGAAAACCTGCGCCGTATGTGGGGCCACAGGATGTGGCGCTGGCTATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCAAACCAATGATTGCGCTGCCGTTCCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGTGTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATTGGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACCTCTGCCAGCGAACTTGATTGCTGGGACAACGTGCCGGAGTACGCCTTCGATGTAACGCCGTATAAAAACCGTGTTTATCAGGGCTTTGTGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCTGGCGGAGTTTACCCTGTCTCGCCGCGATCCCGGTTATGTTAGCAGAAGTAAAGCGACTGCTGAGCTGGAAAATCAGCGTCTGGCGGGGAATGTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGCGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGATTACATTTACATCCCTGGCATTAAAGCGGCGCTGGATAATCCGGGTACGACGTTTAAAGGTTATGTGATCCATGAAGATGCGCCGGTAACGGAAATTACGCTCTATATGGAAAGTCTGACTGCTGAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAA", + "dna_sequence_length": 2262, + "functions": [ + "aconitase family protein" + ], + "id": "CDS_753", + "location": [ + [ + "NC_000913", + 803503, + "+", + 2262 + ] + ], + "md5": "7289a479e76c9d9b354a73946f1b894e", + "parent_gene": "", + "protein_md5": "6a396a78209cd015940d1535e5abb1e7", + "protein_translation": "MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002629" + ], + [ + "gene_synonym", + "ECK0761" + ], + [ + "gene_synonym", + "EcoGene:EG12875" + ], + [ + "gene_synonym", + "GI:16128740" + ], + [ + "gene_synonym", + "GeneID:945381" + ], + [ + "gene_synonym", + "JW0755" + ], + [ + "gene_synonym", + "NP_415293.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46130" + ], + [ + "gene_synonym", + "b0772" + ], + [ + "gene_synonym", + "ybhC" + ] + ], + "dna_sequence": "GTGAACACATTTTCAGTTTCCCGTCTGGCGCTGGCATTGGCTTTTGGCGTGACGCTGACCGCCTGTAGCTCAACCCCGCCCGATCAACGTCCTTCTGATCAAACCGCGCCTGGTACCTCTTCTCGCCCGATTCTGTCGGCAAAAGAAGCGCAGAATTTCGATGCTCAACACTATTTTGCATCCCTGACACCAGGTGCTGCAGCGTGGAATCCTTCCCCGATTACCCTGCCTGCGCAACCTGACTTTGTTGTCGGCCCGGCGGGCACTCAAGGTGTAACGCATACCACGATTCAGGCGGCGGTAGATGCGGCAATTATCAAGCGTACCAACAAGCGCCAGTATATTGCCGTGATGCCTGGTGAGTATCAGGGAACGGTATATGTCCCTGCCGCTCCGGGTGGAATTACTCTGTACGGTACAGGTGAAAAACCGATTGATGTGAAGATTGGGCTTTCCCTTGATGGTGGCATGAGCCCTGCCGACTGGCGTCACGACGTCAACCCGCGCGGCAAATATATGCCAGGTAAACCAGCGTGGTATATGTACGATAGCTGCCAGAGCAAACGCAGCGACAGTATCGGTGTTCTCTGCTCTGCGGTCTTCTGGTCACAAAACAATGGCCTGCAACTGCAAAATCTGACCATCGAAAACACGCTGGGCGATAGCGTAGATGCAGGTAACCATCCGGCGGTGGCACTGCGTACTGATGGTGACCAGGTACAGATTAACAACGTTAACATTCTCGGTCGTCAGAACACCTTCTTTGTCACCAACAGCGGTGTGCAGAACCGTCTGGAAACGAATCGTCAGCCGCGTACGCTGGTGACCAACAGCTACATTGAAGGGGATGTGGATATCGTTTCTGGTCGCGGCGCAGTGGTGTTCGATAACACCGAATTCCGCGTGGTGAACTCACGTACTCAGCAAGAAGCGTATGTGTTTGCACCGGCTACGCTGTCCAACATTTACTACGGTTTCCTCGCCGTAAACAGCCGTTTCAATGCTTTCGGTGATGGTGTGGCGCAACTGGGCCGCTCGCTGGATGTTGATGCCAATACCAACGGTCAGGTGGTGATCCGTGATAGCGCCATCAACGAAGGTTTTAACACGGCTAAACCGTGGGCCGATGCGGTGATCTCTAATCGTCCGTTTGCGGGTAATACCGGCAGCGTAGATGATAACGACGAAATACAGCGCAATCTGAATGACACTAACTACAACCGCATGTGGGAATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAA", + "dna_sequence_length": 1284, + "functions": [ + "acyl-CoA thioesterase, lipoprotein" + ], + "id": "CDS_754", + "location": [ + [ + "NC_000913", + 807281, + "-", + 1284 + ] + ], + "md5": "1650c786017d3059146fb6637510f69e", + "parent_gene": "", + "protein_md5": "328680e07a1114581f5ecb3856580677", + "protein_translation": "MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002632" + ], + [ + "gene_synonym", + "ECK0762" + ], + [ + "gene_synonym", + "EcoGene:EG11238" + ], + [ + "gene_synonym", + "GI:16128741" + ], + [ + "gene_synonym", + "GeneID:945383" + ], + [ + "gene_synonym", + "JW0756" + ], + [ + "gene_synonym", + "NP_415294.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12994" + ], + [ + "gene_synonym", + "b0773" + ], + [ + "gene_synonym", + "ybhB" + ] + ], + "dna_sequence": "ATGAAACTCATCAGTAACGATCTGCGCGATGGCGATAAATTGCCGCATCGTCATGTCTTTAACGGCATGGGTTACGATGGCGATAATATTTCACCGCATCTGGCGTGGGATGATGTTCCTGCGGGAACGAAAAGTTTTGTTGTCACCTGCTACGACCCGGATGCGCCAACCGGCTCCGGCTGGTGGCACTGGGTAGTTGTTAACTTACCCGCTGATACCCGCGTATTACCGCAAGGGTTTGGCTCTGGTCTGGTAGCAATGCCAGACGGCGTTTTGCAGACGCGTACCGACTTTGGTAAAACCGGGTACGATGGCGCAGCACCGCCGAAAGGCGAAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCGATGAAGGTGCCAGCGGCGCGATGGTCGGGTTTAACGTTCATTTCCACTCTCTGGCAAGCGCCTCGATTACTGCGATGTTTAGTTAA", + "dna_sequence_length": 477, + "functions": [ + "kinase inhibitor homolog, UPF0098 family" + ], + "id": "CDS_755", + "location": [ + [ + "NC_000913", + 807909, + "-", + 477 + ] + ], + "md5": "135b35242f3c9cb5917f26c788f75f71", + "parent_gene": "", + "protein_md5": "878e895a9d6cf67c2b7aea963aedcd08", + "protein_translation": "MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002635" + ], + [ + "gene_synonym", + "ECK0763" + ], + [ + "gene_synonym", + "EcoGene:EG10117" + ], + [ + "gene_synonym", + "GI:16128742" + ], + [ + "gene_synonym", + "GeneID:945376" + ], + [ + "gene_synonym", + "JW0757" + ], + [ + "gene_synonym", + "NP_415295.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12995" + ], + [ + "gene_synonym", + "b0774" + ], + [ + "gene_synonym", + "bioA" + ] + ], + "dna_sequence": "ATGACAACGGACGATCTTGCCTTTGACCAACGCCATATCTGGCACCCATACACATCCATGACCTCCCCTCTGCCGGTTTATCCGGTGGTGAGCGCCGAAGGTTGCGAGCTGATTTTGTCTGACGGCAGACGCCTGGTTGACGGTATGTCGTCCTGGTGGGCGGCGATCCACGGCTACAATCACCCGCAGCTTAATGCGGCGATGAAGTCGCAAATTGATGCCATGTCGCATGTGATGTTTGGCGGTATCACCCATGCGCCAGCCATTGAGCTGTGCCGCAAACTGGTGGCGATGACGCCGCAACCGCTGGAGTGCGTTTTTCTCGCGGACTCCGGTTCCGTAGCGGTGGAAGTGGCGATGAAAATGGCGTTGCAGTACTGGCAAGCCAAAGGCGAAGCGCGCCAGCGTTTTCTGACCTTCCGCAATGGTTATCATGGCGATACCTTTGGCGCGATGTCGGTGTGCGATCCGGATAACTCAATGCACAGTCTGTGGAAAGGCTACCTGCCAGAAAACCTGTTTGCTCCCGCCCCGCAAAGCCGCATGGATGGCGAATGGGATGAGCGCGATATGGTGGGCTTTGCCCGCCTGATGGCGGCGCATCGTCATGAAATCGCGGCGGTGATCATTGAGCCGATTGTCCAGGGCGCAGGCGGGATGCGCATGTACCATCCGGAATGGTTAAAACGAATCCGCAAAATATGCGATCGCGAAGGTATCTTGCTGATTGCCGACGAGATCGCCACTGGATTTGGTCGTACCGGGAAACTGTTTGCCTGTGAACATGCAGAAATCGCGCCGGACATTTTGTGCCTCGGTAAAGCCTTAACCGGCGGCACAATGACCCTTTCCGCCACACTCACCACGCGCGAGGTTGCAGAAACCATCAGTAACGGTGAAGCCGGTTGCTTTATGCATGGGCCAACTTTTATGGGCAATCCGCTGGCCTGCGCGGCAGCAAACGCCAGCCTGGCGATTCTCGAATCTGGCGACTGGCAGCAACAGGTGGCGGATATTGAAGTACAGCTGCGCGAGCAACTTGCCCCCGCCCGTGATGCCGAAATGGTTGCCGATGTGCGCGTACTGGGGGCCATTGGCGTGGTCGAAACCACTCATCCGGTGAATATGGCGGCGCTGCAAAAATTCTTTGTCGAACAGGGTGTCTGGATCCGGCCTTTTGGCAAACTGATTTACCTGATGCCGCCCTATATTATTCTCCCGCAACAGTTGCAGCGTCTGACCGCAGCGGTTAACCGCGCGGTACAGGATGAAACATTTTTTTGCCAATAA", + "dna_sequence_length": 1290, + "functions": [ + "7,8-diaminopelargonic acid synthase, PLP-dependent" + ], + "id": "CDS_756", + "location": [ + [ + "NC_000913", + 809257, + "-", + 1290 + ] + ], + "md5": "067e43650559d2b7050509c4d64e052c", + "parent_gene": "", + "protein_md5": "62dae4061648b2cb697bc3b505e06aa0", + "protein_translation": "MTTDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002644" + ], + [ + "gene_synonym", + "ECK0764" + ], + [ + "gene_synonym", + "EcoGene:EG10118" + ], + [ + "gene_synonym", + "GI:16128743" + ], + [ + "gene_synonym", + "GeneID:945370" + ], + [ + "gene_synonym", + "JW0758" + ], + [ + "gene_synonym", + "NP_415296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12996" + ], + [ + "gene_synonym", + "b0775" + ], + [ + "gene_synonym", + "bioB" + ] + ], + "dna_sequence": "ATGGCTCACCGCCCACGCTGGACATTGTCGCAAGTCACAGAATTATTTGAAAAACCGTTGCTGGATCTGCTGTTTGAAGCGCAGCAGGTGCATCGCCAGCATTTCGATCCTCGTCAGGTGCAGGTCAGCACGTTGCTGTCGATTAAGACCGGAGCTTGTCCGGAAGATTGCAAATACTGCCCGCAAAGCTCGCGCTACAAAACCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGACACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTCGCGCGGATCATGATGCCAACCTCTTACGTGCGCCTTTCTGCCGGACGCGAGCAGATGAACGAACAGACTCAGGCGATGTGCTTTATGGCAGGCGCAAACTCGATTTTCTACGGTTGCAAACTGCTGACCACGCCGAATCCGGAAGAAGATAAAGACCTGCAACTGTTCCGCAAACTGGGGCTAAATCCGCAGCAAACTGCCGTGCTGGCAGGGGATAACGAACAACAGCAACGTCTTGAACAGGCGCTGATGACCCCGGACACCGACGAATATTACAACGCGGCAGCATTATGA", + "dna_sequence_length": 1041, + "functions": [ + "biotin synthase" + ], + "id": "CDS_757", + "location": [ + [ + "NC_000913", + 809344, + "+", + 1041 + ] + ], + "md5": "d97f2efd58335e36fb7bbbb5f0313e7f", + "parent_gene": "", + "protein_md5": "ecbf75df6acdc7918e9a9eed66c72b8d", + "protein_translation": "MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002646" + ], + [ + "gene_synonym", + "ECK0765" + ], + [ + "gene_synonym", + "EcoGene:EG10121" + ], + [ + "gene_synonym", + "GI:16128744" + ], + [ + "gene_synonym", + "GeneID:945384" + ], + [ + "gene_synonym", + "JW0759" + ], + [ + "gene_synonym", + "NP_415297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12998" + ], + [ + "gene_synonym", + "b0776" + ], + [ + "gene_synonym", + "bioF" + ] + ], + "dna_sequence": "ATGAGCTGGCAGGAGAAAATCAACGCGGCGCTCGATGCGCGGCGTGCTGCCGATGCCCTGCGTCGCCGTTATCCGGTGGCGCAAGGAGCCGGACGCTGGCTGGTGGCGGATGATCGCCAGTATCTGAACTTTTCCAGTAACGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCCCGTCGCAGCTTCGCCGTTTTGCTCATAACGATGTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGTAAAACCAGAATTGCTGGTAGTGACTTTTGGCAAAGGATTTGGCGTCAGCGGGGCAGCGGTGCTTTGCTCCAGTACGGTGGCGGATTATCTGCTGCAATTCGCCCGCCACCTTATCTACAGCACCAGTATGCCGCCCGCTCAGGCGCAGGCATTACGTGCGTCGCTGGCGGTCATTCGCAGTGATGAGGGTGATGCACGGCGCGAAAAACTGGCGGCACTCATTACGCGTTTTCGTGCCGGAGTACAGGATTTGCCGTTTACGCTTGCTGATTCATGCAGCGCCATCCAGCCATTGATTGTCGGTGATAACAGCCGTGCGTTACAACTGGCAGAAAAACTGCGTCAGCAAGGCTGCTGGGTCACGGCGATTCGCCCGCCAACCGTACCCGCTGGTACTGCGCGACTGCGCTTAACGCTAACCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAA", + "dna_sequence_length": 1155, + "functions": [ + "8-amino-7-oxononanoate synthase" + ], + "id": "CDS_758", + "location": [ + [ + "NC_000913", + 810381, + "+", + 1155 + ] + ], + "md5": "8eeeb64ebee3a87dd6f681b5022e4e51", + "parent_gene": "", + "protein_md5": "7441f2eeb82631cd04194e5dd4597e39", + "protein_translation": "MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002648" + ], + [ + "gene_synonym", + "ECK0766" + ], + [ + "gene_synonym", + "EcoGene:EG10119" + ], + [ + "gene_synonym", + "GI:16128745" + ], + [ + "gene_synonym", + "GeneID:945388" + ], + [ + "gene_synonym", + "JW0760" + ], + [ + "gene_synonym", + "NP_415298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12999" + ], + [ + "gene_synonym", + "b0777" + ], + [ + "gene_synonym", + "bioC" + ] + ], + "dna_sequence": "ATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAGGCGTGGCAGGCGGTGGACGAGCGTCCGCATGCTAATCGCTTTTTACCGCCAGATGAAATCGAACAGTCGCTGAACGGCGTGCATTATCAACATCATATTCAGCCCATCACGCTGTGGTTTGATGATGCGCTCAGTGCCATGCGTTCGCTGAAAGGCATCGGTGCCACGCATCTTCATGAAGGGCGCGACCCGCGAATATTAACGCGTTCGCAGTTGCAGCGATTGCAACTGGCCTGGCCGCAACAGCAGGGGCGATATCCTCTGACGTATCATCTTTTTTTGGGAGTGATTGCTCGTGAGTAA", + "dna_sequence_length": 756, + "functions": [ + "malonyl-ACP O-methyltransferase, SAM-dependent" + ], + "id": "CDS_759", + "location": [ + [ + "NC_000913", + 811522, + "+", + 756 + ] + ], + "md5": "3ecc2f169a794b85fce5d70410bb8176", + "parent_gene": "", + "protein_md5": "050ade427d2757f7299794e0e575f71e", + "protein_translation": "MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002650" + ], + [ + "gene_synonym", + "ECK0767" + ], + [ + "gene_synonym", + "EcoGene:EG10120" + ], + [ + "gene_synonym", + "GI:16128746" + ], + [ + "gene_synonym", + "GeneID:945387" + ], + [ + "gene_synonym", + "JW0761" + ], + [ + "gene_synonym", + "NP_415299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13000" + ], + [ + "gene_synonym", + "b0778" + ], + [ + "gene_synonym", + "bioD" + ] + ], + "dna_sequence": "GTGAGTAAACGTTATTTTGTCACCGGAACGGATACCGAAGTGGGGAAAACTGTCGCCAGTTGTGCACTTTTACAAGCCGCAAAGGCAGCAGGCTACCGGACGGCAGGTTATAAACCGGTCGCCTCTGGCAGCGAAAAGACCCCGGAAGGTTTACGCAATAGCGACGCGCTGGCGTTACAGCGCAACAGCAGCCTGCAGCTGGATTACGCAACAGTAAATCCTTACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGGCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCCCTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAG", + "dna_sequence_length": 678, + "functions": [ + "dethiobiotin synthetase" + ], + "id": "CDS_760", + "location": [ + [ + "NC_000913", + 812270, + "+", + 678 + ] + ], + "md5": "e55b8450498478058b29596b71da66cf", + "parent_gene": "", + "protein_md5": "9e7702ff6296c49969a189db562d111c", + "protein_translation": "MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002658" + ], + [ + "gene_synonym", + "ECK0768" + ], + [ + "gene_synonym", + "EcoGene:EG11062" + ], + [ + "gene_synonym", + "GI:16128747" + ], + [ + "gene_synonym", + "GeneID:945385" + ], + [ + "gene_synonym", + "JW0762" + ], + [ + "gene_synonym", + "NP_415300.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8F8" + ], + [ + "gene_synonym", + "b0779" + ], + [ + "gene_synonym", + "dar-1" + ], + [ + "gene_synonym", + "dar-6" + ], + [ + "gene_synonym", + "uvrB" + ] + ], + "dna_sequence": "ATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTCCGCCACCAAAGCGATGCTGGAGCGGCGTGATGTGGTTGTGGTGGCGTCTGTTTCCGCGATTTATGGTCTGGGCGATCCTGATTTATATCTCAAGATGATGCTCCATCTCACGGTCGGTATGATTATCGATCAGCGCGCGATTCTGCGCCGACTGGCGGAGCTGCAATACGCTCGTAATGATCAAGCATTCCAGCGTGGTACTTTCCGCGTTCGTGGCGAGGTGATAGATATCTTCCCGGCAGAATCGGATGACATTGCACTTCGCGTGGAACTGTTTGACGAGGAAGTGGAACGATTGTCGTTATTTGACCCGCTGACCGGGCAGATTGTTTCCACTATTCCACGTTTTACCATCTACCCGAAAACGCACTACGTCACACCGCGCGAGCGCATCGTACAGGCGATGGAGGAGATCAAAGAAGAGCTGGCCGCCAGACGCAAAGTGCTGTTGGAAAACAACAAACTGCTGGAAGAGCAGCGGCTGACCCAGCGTACCCAGTTTGATCTGGAGATGATGAACGAGCTGGGCTACTGTTCGGGGATTGAAAACTACTCGCGCTTCCTCTCCGGTCGTGGACCGGGTGAGCCACCGCCGACGCTGTTTGATTACCTGCCTGCCGATGGGCTGCTGGTCGTCGATGAATCTCACGTCACCATTCCACAAATTGGCGGCATGTATCGCGGTGACCGGGCGCGTAAAGAGACACTGGTGGAGTACGGCTTCCGCCTGCCATCAGCGCTGGATAACCGTCCGCTTAAGTTTGAAGAGTTCGAAGCATTAGCGCCGCAAACCATCTATGTTTCGGCGACGCCGGGTAATTACGAGCTGGAAAAATCCGGCGGCGATGTGGTGGATCAGGTGGTGCGTCCAACCGGATTGCTTGACCCGATTATCGAAGTGCGGCCGGTGGCGACACAGGTTGATGATCTTCTTTCGGAGATTCGTCAGCGAGCGGCAATTAACGAACGCGTACTGGTCACCACACTGACCAAGCGGATGGCGGAAGATCTTACCGAATATCTCGAAGAACATGGCGAGCGCGTGCGTTATCTTCACTCAGATATCGACACCGTCGAACGTATGGAGATTATCCGCGACTTGCGTCTGGGTGAGTTCGACGTGCTGGTAGGGATCAACTTACTGCGCGAAGGTCTGGATATGCCGGAAGTGTCGCTGGTGGCGATCCTCGACGCTGACAAAGAAGGCTTCCTGCGTTCCGAACGTTCGTTGATCCAGACCATTGGTCGTGCGGCACGTAACGTTAACGGTAAAGCGATTCTCTACGGCGATAAGATCACCCCATCAATGGCGAAAGCGATTGGCGAAACCGAACGTCGCCGTGAGAAACAGCAGAAGTACAACGAGGAACACGGAATTACGCCGCAAGGCTTGAACAAGAAAGTGGTCGATATCCTGGCGCTGGGGCAGAACATTGCCAAAACCAAAGCGAAGGGCAGAGGAAAATCGCGCCCGATTGTTGAGCCGGATAATGTGCCGATGGATATGTCGCCTAAAGCGTTGCAGCAGAAAATCCATGAGCTGGAAGGGTTGATGATGCAACACGCGCAGAATCTGGAGTTCGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAA", + "dna_sequence_length": 2022, + "functions": [ + "exision nuclease of nucleotide excision repair, DNA damage recognition component" + ], + "id": "CDS_761", + "location": [ + [ + "NC_000913", + 813526, + "+", + 2022 + ] + ], + "md5": "65330084fe97e2492c33aba348645e35", + "parent_gene": "", + "protein_md5": "ec0a6df625d8492ad92d6b933cb6f65f", + "protein_translation": "MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS", + "protein_translation_length": 673, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002661" + ], + [ + "gene_synonym", + "ECK0769" + ], + [ + "gene_synonym", + "EcoGene:EG13667" + ], + [ + "gene_synonym", + "GI:16128748" + ], + [ + "gene_synonym", + "GeneID:945390" + ], + [ + "gene_synonym", + "JW0763" + ], + [ + "gene_synonym", + "NP_415301.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75767" + ], + [ + "gene_synonym", + "b0780" + ], + [ + "gene_synonym", + "ybhK" + ] + ], + "dna_sequence": "ATGCGCAATCGTACGCTGGCTGATCTTGATCGTGTCGTTGCTCTCGGCGGAGGGCATGGACTGGGACGCGTTCTCTCATCACTTTCGTCTTTGGGTTCTCGTTTAACGGGTATCGTCACCACCACCGATAATGGTGGCTCGACGGGGCGTATTCGCCGTTCAGAAGGCGGCATTGCCTGGGGCGATATGCGCAACTGCCTCAACCAGCTGATAACGGAACCGAGCGTCGCCTCCGCGATGTTTGAATACCGTTTTGGTGGCAATGGCGAACTTTCCGGTCATAATCTCGGAAACTTGATGTTAAAGGCGCTGGATCACCTTAGCGTGCGGCCTCTGGAAGCCATCAATTTAATTCGTAATCTGCTGAAAGTGGATACGCATTTGATTCCAATGTCAGAGCATCCTGTTGATCTGATGGCGATTGACGATCAGGGGCATGAAGTTTACGGCGAGGTCAATATCGACCAGTTAACTACGCCGATTCAAGAGTTATTGTTAACGCCTAATGTACCCGCAACGCGTGAGGCGGTTCACGCTATCAATGAAGCGGATCTCATCATTATTGGGCCTGGCAGTTTTTATACCAGCCTGATGCCAATTCTGCTGCTGAAGGAAATCGCCCAGGCATTACGCCGCACGCCAGCGCCGATGGTTTATATCGGCAATCTGGGGCGTGAGTTGAGTTTACCTGCGGCTAATTTGAAGCTGGAAAGCAAGCTGGCAATTATGGAGCAGTATGTTGGTAAAAAGGTCATTGATGCGGTCATCGTCGGGCCAAAAGTGGATGTCTCGGCGGTGAAAGAGCGGATTGTGATCCAGGAGGTACTGGAGGCCAGCGATATTCCGTATCGTCATGACCGCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAA", + "dna_sequence_length": 909, + "functions": [ + "putative CofD superfamily transferase" + ], + "id": "CDS_762", + "location": [ + [ + "NC_000913", + 816647, + "-", + 909 + ] + ], + "md5": "1139488a0cf4f67633bfac3b38859499", + "parent_gene": "", + "protein_md5": "1ecffde042eb451537578d672b06669e", + "protein_translation": "MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002669" + ], + [ + "gene_synonym", + "ECK0770" + ], + [ + "gene_synonym", + "EcoGene:EG11595" + ], + [ + "gene_synonym", + "GI:16128749" + ], + [ + "gene_synonym", + "GeneID:945392" + ], + [ + "gene_synonym", + "JW0764" + ], + [ + "gene_synonym", + "NP_415302.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30745" + ], + [ + "gene_synonym", + "b0781" + ], + [ + "gene_synonym", + "bisA" + ], + [ + "gene_synonym", + "chlA" + ], + [ + "gene_synonym", + "moaA" + ], + [ + "gene_synonym", + "narA" + ] + ], + "dna_sequence": "ATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGTCGATTACCGATGTGTGTAACTTTCGTTGCACCTACTGCCTGCCGGATGGCTACAAACCGAGCGGCGTCACCAATAAAGGCTTTCTTACCGTCGATGAAATTCGCCGGGTTACGCGCGCCTTCGCCAGACTGGGCACCGAAAAAGTGCGCCTGACAGGAGGAGAGCCGTCTTTACGCCGCGACTTTACCGATATCATCGCCGCTGTGCGGGAAAACGACGCTATCCGCCAGATTGCGGTCACAACCAATGGTTACCGTCTGGAACGCGATGTGGCGAGCTGGCGCGATGCGGGACTTACTGGCATTAACGTCAGTGTCGACAGTCTGGACGCCCGCCAGTTTCACGCTATTACCGGGCAGGATAAATTCAACCAGGTCATGGCAGGGATTGATGCTGCATTTGAGGCCGGTTTTGAGAAGGTCAAAGTCAATACCGTGCTGATGCGTGATGTTAATCATCACCAGCTCGACACCTTTCTGAACTGGATCCAGCATCGCCCTATCCAGCTGCGTTTCATCGAACTGATGGAAACGGGCGAGGGCAGCGAGCTCTTCCGTAAGCATCACATCTCTGGTCAGGTTCTGCGTGACGAGCTACTGCGTCGCGGCTGGATCCACCAATTACGTCAACGCAGCGACGGTCCCGCGCAAGTCTTTTGCCATCCAGATTACGCCGGAGAGATTGGCCTTATCATGCCGTATGAAAAAGACTTCTGCGCCACTTGCAACCGCCTGCGCGTTTCCTCCATTGGTAAACTCCATCTCTGCCTGTTTGGTGAAGGCGGCGTTAACCTGCGCGATCTGCTGGAAGACGATACCCAGCAACAGGCGCTGGAAGCGCGTATTTCAGCGGCGCTGCGGGAGAAGAAACAGACCCATTTCCTGCATCAAAACAACACCGGTATTACGCAAAACTTATCGTACATTGGCGGCTAA", + "dna_sequence_length": 990, + "functions": [ + "molybdopterin biosynthesis protein A" + ], + "id": "CDS_763", + "location": [ + [ + "NC_000913", + 817044, + "+", + 990 + ] + ], + "md5": "137d399a64b406556084614bec8b8852", + "parent_gene": "", + "protein_md5": "92388a53bbea7cbbdc5d38d153fe733e", + "protein_translation": "MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFARLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002671" + ], + [ + "gene_synonym", + "ECK0771" + ], + [ + "gene_synonym", + "EcoGene:EG11596" + ], + [ + "gene_synonym", + "GI:16128750" + ], + [ + "gene_synonym", + "GeneID:945396" + ], + [ + "gene_synonym", + "JW0765" + ], + [ + "gene_synonym", + "NP_415303.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEZ9" + ], + [ + "gene_synonym", + "b0782" + ], + [ + "gene_synonym", + "moaB" + ] + ], + "dna_sequence": "ATGAGTCAGGTAAGCACTGAATTTATCCCGACCCGTATTGCTATTCTTACGGTTTCTAATCGTCGCGGTGAAGAAGACGATACCTCCGGTCACTATCTGCGCGATTCGGCGCAAGAAGCGGGCCATCACGTTGTCGATAAAGCCATTGTGAAAGAAAACCGCTACGCTATTCGCGCTCAGGTATCTGCGTGGATCGCCAGCGACGATGTACAAGTGGTATTGATTACGGGTGGTACTGGCCTGACGGAAGGTGATCAGGCTCCCGAAGCATTGCTGCCGTTGTTCGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGCCCGTACGCGTCCGTGTAATTTCCATCCACATTTGAAGAAATAA", + "dna_sequence_length": 513, + "functions": [ + "inactive molybdopterin adenylyltransferase" + ], + "id": "CDS_764", + "location": [ + [ + "NC_000913", + 818055, + "+", + 513 + ] + ], + "md5": "04a8b9f0f42648cfe5e069e37f10b241", + "parent_gene": "", + "protein_md5": "1d192ad9a2cf2749c9862f362feb18bc", + "protein_translation": "MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK", + "protein_translation_length": 170, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002673" + ], + [ + "gene_synonym", + "ECK0772" + ], + [ + "gene_synonym", + "EcoGene:EG11666" + ], + [ + "gene_synonym", + "GI:16128751" + ], + [ + "gene_synonym", + "GeneID:945397" + ], + [ + "gene_synonym", + "JW0766" + ], + [ + "gene_synonym", + "NP_415304.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A738" + ], + [ + "gene_synonym", + "b0783" + ], + [ + "gene_synonym", + "moaC" + ] + ], + "dna_sequence": "ATGTCGCAACTGACCCATATCAACGCCGCTGGCGAAGCGCACATGGTGGATGTCTCCGCCAAAGCGGAAACCGTGCGTGAAGCGCGGGCGGAAGCCTTTGTCACCATGCGCAGCGAGACGCTGGCGATGATTATTGATGGTCGCCACCACAAAGGCGACGTATTTGCCACTGCGCGTATTGCCGGTATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAA", + "dna_sequence_length": 486, + "functions": [ + "molybdopterin biosynthesis, protein C" + ], + "id": "CDS_765", + "location": [ + [ + "NC_000913", + 818570, + "+", + 486 + ] + ], + "md5": "921a18b5ac4786c648099ada20d91270", + "parent_gene": "", + "protein_md5": "96aaeda2e4331957aa280da4475fd18d", + "protein_translation": "MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002675" + ], + [ + "gene_synonym", + "ECK0773" + ], + [ + "gene_synonym", + "EcoGene:EG11597" + ], + [ + "gene_synonym", + "GI:16128752" + ], + [ + "gene_synonym", + "GeneID:945398" + ], + [ + "gene_synonym", + "JW0767" + ], + [ + "gene_synonym", + "NP_415305.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30748" + ], + [ + "gene_synonym", + "b0784" + ], + [ + "gene_synonym", + "chlM" + ], + [ + "gene_synonym", + "moaD" + ] + ], + "dna_sequence": "ATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAACCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGAGGTTAA", + "dna_sequence_length": 246, + "functions": [ + "molybdopterin synthase, small subunit" + ], + "id": "CDS_766", + "location": [ + [ + "NC_000913", + 819048, + "+", + 246 + ] + ], + "md5": "d998847be3b49c4be907e4537d8a76fb", + "parent_gene": "", + "protein_md5": "4af7f177bfbdcea92812e6292c56fae6", + "protein_translation": "MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002678" + ], + [ + "gene_synonym", + "ECK0774" + ], + [ + "gene_synonym", + "EcoGene:EG11598" + ], + [ + "gene_synonym", + "GI:16128753" + ], + [ + "gene_synonym", + "GeneID:945399" + ], + [ + "gene_synonym", + "JW0768" + ], + [ + "gene_synonym", + "NP_415306.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30749" + ], + [ + "gene_synonym", + "b0785" + ], + [ + "gene_synonym", + "moaE" + ] + ], + "dna_sequence": "ATGGCAGAAACCAAAATTGTTGTTGGTCCGCAGCCGTTCAGCGTAGGAGAAGAGTACCCGTGGCTGGCGGAGCGTGACGAAGACGGTGCGGTAGTCACCTTTACTGGTAAGGTGCGCAACCATAACCTGGGCGACAGCGTCAACGCATTAACCCTCGAACACTATCCGGGGATGACTGAAAAAGCACTGGCAGAAATTGTTGATGAAGCGCGTAACCGCTGGCCGCTGGGGCGCGTCACTGTGATTCACCGCATCGGGGAATTATGGCCGGGCGATGAAATCGTTTTTGTCGGTGTCACCAGTGCGCATCGCAGCAGTGCGTTTGAAGCCGGGCAGTTTATTATGGATTATCTCAAAACCCGCGCACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAG", + "dna_sequence_length": 453, + "functions": [ + "molybdopterin synthase, large subunit" + ], + "id": "CDS_767", + "location": [ + [ + "NC_000913", + 819295, + "+", + 453 + ] + ], + "md5": "2ddc38e32531e140014a18859b7fdc59", + "parent_gene": "", + "protein_md5": "b138ca230bc137682d8cb2006075bdfc", + "protein_translation": "MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002685" + ], + [ + "gene_synonym", + "ECK0775" + ], + [ + "gene_synonym", + "EcoGene:EG13668" + ], + [ + "gene_synonym", + "GI:16128754" + ], + [ + "gene_synonym", + "GeneID:945401" + ], + [ + "gene_synonym", + "JW0769" + ], + [ + "gene_synonym", + "NP_415307.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAC4" + ], + [ + "gene_synonym", + "aceP" + ], + [ + "gene_synonym", + "b0786" + ], + [ + "gene_synonym", + "ybhL" + ] + ], + "dna_sequence": "ATGGACAGATTCCCACGTTCTGATTCAATCGTACAACCCCGGGCTGGCTTGCAAACTTATATGGCTCAAGTCTATGGCTGGATGACCGTTGGCTTGTTGCTGACCGCATTTGTTGCCTGGTATGCGGCTAATTCCGCGGCCGTGATGGAGCTGTTGTTCACTAACCGTGTCTTTTTAATCGGTCTGATCATCGCGCAATTAGCATTGGTTATTGTGTTATCAGCGATGATTCAAAAGCTGAGCGCAGGTGTAACGACGATGCTCTTTATGCTTTATTCGGCGCTGACGGGTCTTACGCTTTCCAGTATATTCATTGTCTATACCGCTGCTTCTATCGCCAGTACTTTCGTCGTTACTGCCGGGATGTTCGGCGCAATGAGCCTGTACGGTTACACCACGAAGCGCGATTTAAGTGGCTTTGGCAATATGCTGTTTATGGCGTTAATCGGCATTGTGCTGGCATCGCTGGTCAACTTCTGGTTGAAAAGCGAAGCATTGATGTGGGCAGTTACCTACATCGGCGTGATTGTCTTTGTCGGATTGACGGCGTATGACACGCAGAAACTGAAAAATATGGGTGAGCAGATTGATACCCGCGACACGTCGAACCTGCGCAAATATTCCATTCTTGGCGCGTTAACCTTGTATCTGGACTTCATCAACCTGTTCCTGATGTTGTTGCGGATCTTCGGCAACCGCCGTTAA", + "dna_sequence_length": 705, + "functions": [ + "putative acetate transporter", + "BAX Inhibitor-1 family inner membrane protein" + ], + "id": "CDS_768", + "location": [ + [ + "NC_000913", + 819884, + "+", + 705 + ] + ], + "md5": "d0396baf06e5867f6c87aa12db8c1b22", + "parent_gene": "", + "protein_md5": "579da4df312700556fdc4b955f97e77e", + "protein_translation": "MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002688" + ], + [ + "gene_synonym", + "ECK0776" + ], + [ + "gene_synonym", + "EcoGene:EG13669" + ], + [ + "gene_synonym", + "GI:16128755" + ], + [ + "gene_synonym", + "GeneID:949001" + ], + [ + "gene_synonym", + "JW0770" + ], + [ + "gene_synonym", + "NP_415308.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75769" + ], + [ + "gene_synonym", + "b0787" + ], + [ + "gene_synonym", + "ybhM" + ] + ], + "dna_sequence": "ATGGAATCATACTCGCAAAACAGCAATAAATTAGATTTTCAGCACGAGGCCAGGATATTAAACGGTATATGGCTCATTACCGCTTTAGGTTTGGTGGCAACCGCAGGACTAGCCTGGGGAGCTAAGTATATCGAAATTACGGCAACCAAATATGATTCACCACCAATGTATGTCGCCATAGGGTTATTATTACTTTGTATGTATGGCTTAAGTAAGGATATCAACAAGATAAATGCCGCCATCGCGGGCGTAATATATCTGTTTTTACTCTCTTTGGTGGCGATTGTCGTTGCAAGTTTAGTTCCTGTATATGCCATTATCATCGTGTTCAGCACTGCGGGCGCGATGTTTTTAATCAGTATGCTGGCCGGTTTATTATTTAATGTTGATCCTGGTTCTCACCGTTTTATCATTATGATGACGTTGACAGGGTTGGCCCTGGTAATCATCGTGAATGCGGCATTAATGAGTGAACGGCCCATTTGGATAATAAGTTGCTTAATGATTGTGTTATGGTCAGGCATTATCTCGCATGGACGAAATAAGCTCCTTGAATTGGCGGGGAAATGCCATAGTGAAGAGTTGTGGAGTCCGGTTCGTTGCGCTTTTACAGGTGCATTAACACTCTATTACTATTTTATCGGCTTCTTTGGGATACTTGCCGCGATAGCTATAACGCTTGTCTGGCAAAGGCATACGCGTTTTTTTCATTAG", + "dna_sequence_length": 714, + "functions": [ + "BAX Inhibitor-1 family inner membrane protein" + ], + "id": "CDS_769", + "location": [ + [ + "NC_000913", + 820793, + "+", + 714 + ] + ], + "md5": "fe3a022b6d4c3d274ddea47c7d5e2e1a", + "parent_gene": "", + "protein_md5": "d69537d5727e3ebfaa0b968df3f9b164", + "protein_translation": "MESYSQNSNKLDFQHEARILNGIWLITALGLVATAGLAWGAKYIEITATKYDSPPMYVAIGLLLLCMYGLSKDINKINAAIAGVIYLFLLSLVAIVVASLVPVYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERPIWIISCLMIVLWSGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002690" + ], + [ + "gene_synonym", + "ECK0777" + ], + [ + "gene_synonym", + "EcoGene:EG13670" + ], + [ + "gene_synonym", + "GI:16128756" + ], + [ + "gene_synonym", + "GeneID:945410" + ], + [ + "gene_synonym", + "JW0771" + ], + [ + "gene_synonym", + "NP_415309.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75770" + ], + [ + "gene_synonym", + "b0788" + ], + [ + "gene_synonym", + "ybhN" + ] + ], + "dna_sequence": "ATGAGTAAATCACACCCGCGCTGGCGCTTAGCAAAGAAGATCCTCACCTGGCTGTTTTTTATCGCGGTGATTGTGTTGCTGGTGGTCTACGCCAAAAAAGTGGACTGGGAAGAGGTCTGGAAGGTCATCCGCGACTACAATCGCGTTGCGCTGCTTAGTGCGGTCGGGCTGGTGGTCGTCAGCTATCTGATTTACGGCTGCTATGACCTGCTCGCCCGCTTTTACTGCGGTCACAAACTGGCGAAGCGCCAGGTGATGCTGGTGTCGTTTATCTGCTACGCCTTCAACCTGACGCTCAGTACCTGGGTCGGCGGCATTGGTATGCGCTATCGTTTGTACTCTCGTCTGGGGTTGCCCGGTAGCACTATTACGCGGATTTTCTCGCTCAGTATTACCACCAACTGGCTGGGCTACATTTTACTGGCAGGGATTATCTTTACCGCAGGCGTGGTGGAGTTGCCGGATCACTGGTATGTCGATCAAACTACGCTGCGTATTCTCGGCATTGGCTTACTGATGATTATCGCGGTTTATTTGTGGTTTTGCGCTTTCGCGAAGCACCGCCATATGACCATCAAAGGGCAAAAGCTGGTGCTGCCTTCATGGAAATTCGCCCTCGCTCAGATGCTGATTTCCAGCGTTAACTGGATGGTAATGGGGGCGATTATCTGGCTGTTACTTGGTCAAAGCGTGAACTATTTCTTTGTACTGGGCGTGTTACTGGTTAGTAGTATTGCTGGCGTCATCGTGCATATTCCGGCGGGGATCGGTGTGCTGGAAGCGGTGTTTATCGCACTACTGGCTGGGGAGCATACCTCCAAAGGTACAATTATCGCCGCCCTACTCGCTTACCGTGTGCTGTATTACTTTATCCCACTGCTGCTGGCGCTGATCTGTTACCTGTTGCTGGAAAGCCAGGCGAAGAAGCTACGGGCGAAAAATGAAGCGGCGATGTGA", + "dna_sequence_length": 957, + "functions": [ + "UPF0104 family inner membrane protein" + ], + "id": "CDS_770", + "location": [ + [ + "NC_000913", + 822498, + "-", + 957 + ] + ], + "md5": "72824bb6a1f8e99c9b9d370b22210933", + "parent_gene": "", + "protein_md5": "ec3883b2b802d77e6dc8f349e24f9136", + "protein_translation": "MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002692" + ], + [ + "gene_synonym", + "ECK0778" + ], + [ + "gene_synonym", + "EcoGene:EG13671" + ], + [ + "gene_synonym", + "GI:16128757" + ], + [ + "gene_synonym", + "GeneID:945409" + ], + [ + "gene_synonym", + "JW0772" + ], + [ + "gene_synonym", + "NP_415310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA84" + ], + [ + "gene_synonym", + "b0789" + ], + [ + "gene_synonym", + "clsB" + ], + [ + "gene_synonym", + "ybhO" + ] + ], + "dna_sequence": "ATGAAATGTAGCTGGCGCGAAGGCAATAAGATCCAGTTGCTGGAAAACGGCGAGCAATATTATCCCGCGGTGTTTAAGGCGATTGGCGAGGCACAAGAACGCATCATTCTTGAAACGTTTATCTGGTTTGAGGATGACGTCGGCAAACAACTGCATGCGGCACTACTGGCAGCAGCGCAACGCGGGGTTAAAGCGGAAGTCTTGCTGGATGGCTACGGTTCGCCGGATCTCAGCGATGAGTTTGTCAATGAACTGACGGCAGCTGGCGTAGTGTTCCGCTACTACGATCCCCGCCCTCGCCTTTTTGGTATGCGCACCAATGTGTTTCGCCGGATGCATCGCAAAATTGTGGTGATCGACGCGCGTATAGCCTTTATTGGCGGGCTGAATTACTCCGCCGAGCATATGTCCAGCTACGGTCCAGAGGCTAAACAGGATTACGCGGTACGCCTTGAAGGGCCGATTGTCGAAGATATTCTCCAGTTTGAGCTGGAAAACCTGCCTGGACAGAGCGCGGCACGACGCTGGTGGCGACGTCATCACAAAGCGGAAGAGAACCGCCAGCCGGGAGAAGCGCAGGTATTGCTGGTCTGGCGCGATAACGAAGAACATCGCGATGATATTGAACGCCATTATTTGAAAATGCTCACTCAGGCGCGGCGGGAAGTGATTATCGCCAACGCCTACTTCTTCCCCGGCTATCGATTTTTACACGCCTTGCGTAAAGCGGCACGGCGCGGGGTGCGGATCAAACTGATCATTCAGGGCGAACCGGATATGCCGATTGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCGCCCGCTCCACGGCAAAGTGGCATTGATGGACGATCACTGGGCGACAGTAGGGTCCAGTAATCTCGATCCGCTCAGTTTGTCACTGAATCTCGAAGCAAATGTCATCATCCACGATCGTCATTTTAACCAGACGCTGCGCGATAATCTGAACGGCATTATTGCCGCAGATTGTCAGCAGGTGGATGAAACCATGCTGCCCAAACGCACCTGGTGGAACCTGACCAAAAGCGTGCTGGCGTTCCACTTTTTACGCCACTTCCCGGCGCTGGTTGGCTGGCTTCCGGCACACACGCCACGTCTGGCGCAGGTTGATCCGCCCGCACAACCGACAATGGAAACGCAGGATCGGGTAGAAACTGAAAACACGGGGGTAAAACCCTGA", + "dna_sequence_length": 1242, + "functions": [ + "cardiolipin synthase 2" + ], + "id": "CDS_771", + "location": [ + [ + "NC_000913", + 823739, + "-", + 1242 + ] + ], + "md5": "bcb4add0e0beda3c253a62cb64a4b735", + "parent_gene": "", + "protein_md5": "f6a90e84d29d31a77fae7c4ce6d2fe29", + "protein_translation": "MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDILQFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVKGGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRDNLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDPPAQPTMETQDRVETENTGVKP", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002696" + ], + [ + "gene_synonym", + "ECK0779" + ], + [ + "gene_synonym", + "EcoGene:EG13672" + ], + [ + "gene_synonym", + "GI:16128758" + ], + [ + "gene_synonym", + "GeneID:945408" + ], + [ + "gene_synonym", + "JW0773" + ], + [ + "gene_synonym", + "NP_415311.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAW1" + ], + [ + "gene_synonym", + "b0790" + ], + [ + "gene_synonym", + "ybhP" + ] + ], + "dna_sequence": "ATGCCCGATCAAACACAACAATTTTCGTTCAAGGTGCTCACCATCAATATTCACAAAGGCTTTACCGCGTTTAACCGACGCTTCATTTTGCCGGAACTTCGCGACGCCGTGCGTACCGTCAGCGCCGATATTGTTTGCCTGCAGGAAGTGATGGGCGCGCACGAAGTTCATCCGCTGCATGTGGAAAACTGGCCCGATACCTCGCACTACGAGTTTCTCGCCGACACTATGTGGAGCGATTTTGCCTACGGTCGCAATGCCGTATACCCGGAAGGGCATCACGGCAACGCCGTACTGTCGCGTTATCCCATTGAACATTATGAGAATCGCGATGTTTCGGTCGATGGTGCGGAAAAGCGCGGCGTGCTCTACTGCCGCATTGTGCCGCCGATGACCGGAAAAGCGATTCATGTGATGTGCGTACATCTGGGCCTGCGTGAGGCGCACCGTCAGGCGCAGCTTGCGATGCTCGCCGAATGGGTGAATGAGCTACCGGACGGCGAACCGGTATTGGTGGCGGGTGATTTCAATGACTGGCGGCAAAAAGCTAATCATCCGTTAAAAGTGCAGGCCGGACTGGATGAGATTTTTACCCGCGCCCACGGACGCCCGGCGCGCACGTTTCCGGTGCAATTTCCTCTACTACGACTGGACAGGATCTACGTCAAAAATGCCAGCGCCAGCGCGCCAACCGCGTTGCCGCTGCGGACATGGCGACACCTTTCTGATCATGCCCCTTTAAGTGCGGAGATTCATTTATGA", + "dna_sequence_length": 762, + "functions": [ + "endo/exonuclease/phosphatase family protein" + ], + "id": "CDS_772", + "location": [ + [ + "NC_000913", + 824497, + "-", + 762 + ] + ], + "md5": "be091b627acc99bc66c5618d7ab1d9c3", + "parent_gene": "", + "protein_md5": "7594e119ffe8456710f27d137885e84c", + "protein_translation": "MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002699" + ], + [ + "gene_synonym", + "ECK0780" + ], + [ + "gene_synonym", + "EcoGene:EG13673" + ], + [ + "gene_synonym", + "GI:16128759" + ], + [ + "gene_synonym", + "GeneID:945405" + ], + [ + "gene_synonym", + "JW0774" + ], + [ + "gene_synonym", + "NP_415312.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAW5" + ], + [ + "gene_synonym", + "b0791" + ], + [ + "gene_synonym", + "ybhQ" + ] + ], + "dna_sequence": "ATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTAAGTTGCTGGCAGATTATGTTGCATTTACTGGTAGTGGCGCTGCTGGTGGTGGGCTGGATGAGTAAGACTCTGGTTCACGTCGGCGTGGGATTATGCGCACTGTATTGTGTCACGGTAGTGATGATGCTGGTGTTTCAGCGCCACCCCGAGCAACGCTGGCGTGAGGTGGCAGACGTGCTGGAAGAGCTGACCACGACCTGGTATTTTGGCGCAGCGCTGATTGTGCTGTGGCTGTTGTCCCGCGTTCTGGAAAACAACTTTTTGCTGGCAATTGCAGGGCTGGCAATCCTTGCCGGCCCGGCGGTAGTGTCTTTGCTGGCGAAAGATAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGA", + "dna_sequence_length": 411, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_773", + "location": [ + [ + "NC_000913", + 824630, + "+", + 411 + ] + ], + "md5": "877d753fc0040f5e9a18fd917db2c554", + "parent_gene": "", + "protein_md5": "d0c938714fedc9b781bf354ec1a5aaf0", + "protein_translation": "MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002701" + ], + [ + "gene_synonym", + "ECK0781" + ], + [ + "gene_synonym", + "EcoGene:EG13674" + ], + [ + "gene_synonym", + "GI:16128760" + ], + [ + "gene_synonym", + "GeneID:945403" + ], + [ + "gene_synonym", + "JW5803" + ], + [ + "gene_synonym", + "NP_415313.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP9" + ], + [ + "gene_synonym", + "b0792" + ], + [ + "gene_synonym", + "ybhR" + ] + ], + "dna_sequence": "ATGTTTCATCGCTTATGGACGTTAATCCGCAAAGAGTTGCAGTCGTTGCTGCGCGAACCGCAAACCCGCGCGATTCTGATTTTACCCGTGCTAATTCAGGTGATCCTGTTCCCGTTCGCCGCCACGCTGGAAGTGACTAACGCCACCATCGCCATCTACGATGAAGATAACGGCGAGCATTCGGTGGAGCTGACCCAACGTTTTGCCCGCGCCAGCGCCTTTACTCATGTGCTGCTGCTGAAAAGCCCACAGGAGATCCGCCCAACCATCGACACACAAAAGGCGTTACTACTGGTGCGTTTCCCGGCTGACTTCTCGCGCAAACTGGATACCTTCCAGACCGCGCCTTTGCAGTTGATCCTCGACGGGCGTAACTCCAACAGTGCGCAAATTGCCGCCAACTACCTGCAACAGATCGTCAAAAATTATCAGCAGGAGCTGCTGGAAGGAAAACCGAAACCTAACAACAGCGAGCTGGTGGTACGCAACTGGTATAACCCGAATCTCGACTACAAATGGTTTGTGGTGCCGTCACTGATCGCCATGATCACCACTATCGGCGTAATGATCGTCACTTCACTTTCCGTCGCCCGCGAACGTGAACAAGGTACGCTCGATCAGCTACTGGTTTCGCCGCTCACCACCTGGCAGATCTTCATCGGCAAAGCCGTACCGGCGTTAATTGTCGCCACCTTCCAGGCCACCATTGTGCTGGCGATTGGTATCTGGGCGTATCAAATCCCCTTCGCCGGATCGCTGGCGCTGTTCTACTTTACGATGGTGATTTATGGTTTATCGCTGGTGGGATTCGGTCTGTTGATTTCATCACTCTGTTCAACACAACAGCAGGCGTTTATCGGCGTGTTTGTCTTTATGATGCCCGCCATTCTCCTTTCCGGTTACGTTTCTCCGGTGGAAAACATGCCGGTATGGCTGCAAAACCTGACGTGGATTAACCCTATTCGCCACTTTACGGACATTACCAAGCAGATTTATTTGAAGGATGCGAGTCTGGATATTGTGTGGAATAGTTTGTGGCCGCTACTGGTGATAACGGCCACGACAGGGTCAGCGGCGTACGCGATGTTTAGACGTAAGGTGATGTAA", + "dna_sequence_length": 1107, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_774", + "location": [ + [ + "NC_000913", + 826108, + "-", + 1107 + ] + ], + "md5": "690842d558c79e304fb24f4e63607887", + "parent_gene": "", + "protein_md5": "9cc81d16a4ada6aa83fe23a5941d98e1", + "protein_translation": "MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002703" + ], + [ + "gene_synonym", + "ECK0782" + ], + [ + "gene_synonym", + "EcoGene:EG13675" + ], + [ + "gene_synonym", + "GI:16128761" + ], + [ + "gene_synonym", + "GeneID:945411" + ], + [ + "gene_synonym", + "JW0777" + ], + [ + "gene_synonym", + "NP_415314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFQ2" + ], + [ + "gene_synonym", + "b0793" + ], + [ + "gene_synonym", + "ybhS" + ] + ], + "dna_sequence": "ATGAGTAACCCGATCCTGTCCTGGCGTCGCGTACGGGCGCTGTGCGTTAAAGAGACGCGGCAGATCGTTCGCGATCCGAGTAGCTGGCTGATTGCGGTAGTGATCCCGCTGCTACTGCTGTTTATTTTTGGTTACGGCATTAACCTCGACTCCAGCAAGCTGCGGGTCGGGATTTTACTGGAACAGCGTAGCGAAGCGGCGCTGGATTTCACCCACACCATGACCGGTTCGCCCTACATCGACGCCACCATCAGCGATAACCGTCAGGAACTGATCGCCAAAATGCAGGCGGGGAAAATTCGCGGTCTGGTGGTTATTCCGGTGGATTTTGCGGAACAGATGGAGCGCGCCAACGCCACCGCACCGATTCAGGTGATCACCGACGGCAGTGAGCCGAATACCGCTAACTTTGTACAGGGGTATGTCGAAGGGATCTGGCAGATCTGGCAAATGCAGCGAGCGGAGGACAACGGGCAGACTTTTGAACCGCTTATTGATGTACAAACCCGCTACTGGTTTAACCCGGCGGCGATTAGCCAGCACTTCATTATCCCCGGTGCGGTGACCATTATCATGACGGTCATCGGCGCGATTCTCACCTCGCTGGTGGTGGCGCGAGAATGGGAACGCGGCACCATGGAGGCTCTGCTCTCTACGGAGATTACCCGCACGGAACTGCTGCTGTGTAAGCTGATCCCTTATTACTTTCTCGGGATGCTGGCGATGTTGCTGTGTATGCTGGTGTCAGTGTTTATTCTCGGCGTGCCGTATCGCGGGTCGCTGCTGATTCTGTTTTTTATCTCCAGCCTGTTTTTACTCAGTACCCTGGGGATGGGGCTGCTGATTTCCACGATTACCCGCAACCAGTTCAATGCCGCTCAGGTCGCCCTGAACGCCGCTTTTCTGCCGTCGATTATGCTTTCCGGCTTTATTTTTCAGATCGACAGTATGCCCGCGGTGATCCGCGCGGTGACGTACATTATTCCCGCTCGTTATTTCGTCAGCACCCTGCAAAGCCTGTTCCTCGCCGGGAATATTCCAGTGGTGCTGGTGGTAAACGTGCTGTTTTTGATCGCTTCGGCGGTGATGTTTATCGGCCTGACGTGGCTGAAAACCAAACGTCGGCTGGATTAG", + "dna_sequence_length": 1134, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_775", + "location": [ + [ + "NC_000913", + 827252, + "-", + 1134 + ] + ], + "md5": "84cd6caf3a8d918adbe3f0a94d56df4b", + "parent_gene": "", + "protein_md5": "b44cacfa6f04af42d5cc1336e756855c", + "protein_translation": "MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002707" + ], + [ + "gene_synonym", + "ECK0783" + ], + [ + "gene_synonym", + "EcoGene:EG13314" + ], + [ + "gene_synonym", + "GI:90111168" + ], + [ + "gene_synonym", + "GeneID:945413" + ], + [ + "gene_synonym", + "JW5104" + ], + [ + "gene_synonym", + "NP_415315.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9U1" + ], + [ + "gene_synonym", + "b0794" + ], + [ + "gene_synonym", + "ybhF" + ] + ], + "dna_sequence": "ATGAATGATGCCGTTATCACGCTGAACGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCATTCACGCCGGTTATGTGACGGGGTTGGTGGGGCCGGACGGTGCAGGTAAAACCACGCTGATGCGGATGTTGGCGGGATTACTGAAACCCGACAGCGGCAGTGCCACGGTGATTGGCTTTGATCCGATCAAAAACGACGGCGCGCTGCACGCCGTGCTCGGTTATATGCCGCAGAAATTTGGTCTGTATGAAGATCTCACGGTGATGGAGAACCTCAATCTGTACGCGGATTTGCGCAGCGTCACCGGCGAGGCACGTAAGCAAACTTTTGCTCGCCTGCTGGAGTTTACGTCTCTTGGGCCGTTTACCGGACGCCTGGCGGGCAAGCTCTCCGGTGGGATGAAACAAAAACTCGGTCTGGCCTGTACCCTGGTGGGCGAACCGAAAGTGTTGCTGCTCGATGAACCCGGCGTCGGCGTTGACCCTATCTCACGGCGCGAACTGTGGCAGATGGTGCATGAGCTGGCGGGCGAAGGGATGTTAATCCTCTGGAGTACCTCGTATCTCGACGAAGCCGAGCAGTGCCGTGACGTGTTACTGATGAACGAAGGCGAGTTGCTGTATCAGGGAGAACCAAAAGCCCTGACACAAACCATGGCCGGACGCAGCTTTCTGATGACCAGTCCACACGAGGGCAACCGCAAACTGTTGCAACGCGCCTTGAAACTGCCGCAGGTCAGCGACGGCATGATTCAGGGGAAATCGGTACGTCTGATCCTCAAAAAAGAGGCCACACCAGACGATATTCGCCATGCCGACGGGATGCCGGAAATCAACATCAACGAAACTACGCCGCGTTTTGAAGATGCGTTTATTGATTTGCTGGGCGGTGCCGGAACCTCGGAATCGCCGCTGGGCGCAATATTACATACGGTAGAAGGCACACCCGGCGAGACGGTGATCGAAGCGAAAGAACTGACCAAGAAATTTGGGGATTTTGCCGCCACCGATCACGTCAACTTTGCCGTTAAACGTGGGGAGATTTTTGGTTTGCTGGGGCCAAACGGCGCGGGTAAATCGACCACCTTTAAGATGATGTGCGGTTTGCTGGTGCCGACTTCCGGCCAGGCGCTGGTGCTGGGGATGGATCTGAAAGAGAGTTCCGGTAAAGCGCGCCAGCATCTCGGCTATATGGCGCAAAAATTTTCGCTCTACGGTAACCTGACGGTCGAACAGAATTTACGCTTTTTCTCTGGTGTGTATGGCTTACGCGGTCGGGCGCAGAACGAAAAAATCTCCCGCATGAGCGAGGCGTTCGGCCTGAAAAGTATCGCCTCCCACGCCACCGATGAACTGCCATTAGGTTTTAAACAGCGGCTGGCGCTGGCCTGTTCGCTGATGCATGAACCGGACATTCTGTTTCTCGACGAACCGACTTCCGGCGTTGACCCCCTCACCCGCCGTGAATTTTGGCTGCACATCAACAGCATGGTAGAGAAAGGCGTCACGGTGATGGTCACCACCCACTTTATGGATGAAGCGGAATATTGCGACCGCATCGGCCTGGTGTACCGCGGGAAATTAATCGCCAGCGGCACGCCGGACGATTTGAAAGCACAGTCGGCTAACGATGAGCAACCCGATCCCACCATGGAGCAAGCCTTTATTCAGTTGATCCACGACTGGGATAAGGAGCATAGCAATGAGTAA", + "dna_sequence_length": 1737, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_776", + "location": [ + [ + "NC_000913", + 828981, + "-", + 1737 + ] + ], + "md5": "43abbb3576c82bc430f013f3cb953562", + "parent_gene": "", + "protein_md5": "cf1c3c05c2be617a98dc0eca8d54e14a", + "protein_translation": "MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQLIHDWDKEHSNE", + "protein_translation_length": 578, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002709" + ], + [ + "gene_synonym", + "ECK0784" + ], + [ + "gene_synonym", + "EcoGene:EG13315" + ], + [ + "gene_synonym", + "GI:16128763" + ], + [ + "gene_synonym", + "GeneID:945414" + ], + [ + "gene_synonym", + "JW0779" + ], + [ + "gene_synonym", + "NP_415316.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75777" + ], + [ + "gene_synonym", + "b0795" + ], + [ + "gene_synonym", + "ybhG" + ] + ], + "dna_sequence": "GTGATGAAAAAACCTGTCGTGATCGGATTGGCGGTAGTGGTACTTGCCGCCGTGGTTGCCGGAGGCTACTGGTGGTATCAAAGCCGCCAGGATAACGGCCTGACGCTGTATGGCAACGTGGATATTCGTACGGTAAATCTTAGTTTCCGTGTTGGGGGGCGCGTTGAATCGCTGGCGGTGGACGAAGGTGATGCTATCAAAGCGGGCCAGGTGCTGGGCGAACTGGATCACAAGCCGTATGAGATTGCCCTGATGCAGGCGAAAGCGGGTGTTTCGGTGGCACAGGCGCAGTATGACCTGATGCTTGCCGGGTATCGCAATGAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCCAGCAAGGGTTGTGGAAAAGCCGCACTATTTCGGCAAATGACCTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCAACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAGCCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTACAGGACTCAACGTTGATAGCCCCGTCTGATGGCACGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTCCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCGGTGTGGGTGCGCGCTTATGTTGATGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGGTCGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTTCGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAATTCGGTGACGAGGCAGGACATGAATGA", + "dna_sequence_length": 999, + "functions": [ + "putative membrane fusion protein (MFP) component of efflux pump, membrane anchor" + ], + "id": "CDS_777", + "location": [ + [ + "NC_000913", + 829972, + "-", + 999 + ] + ], + "md5": "1694daba4d7beab9ae5386b996900e30", + "parent_gene": "", + "protein_md5": "82ef4ef2381aef8561361155f8f2cef1", + "protein_translation": "MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002711" + ], + [ + "gene_synonym", + "ECK0785" + ], + [ + "gene_synonym", + "EcoGene:EG12406" + ], + [ + "gene_synonym", + "GI:162135896" + ], + [ + "gene_synonym", + "GeneID:945421" + ], + [ + "gene_synonym", + "JW0780" + ], + [ + "gene_synonym", + "NP_415317.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU0" + ], + [ + "gene_synonym", + "b0796" + ], + [ + "gene_synonym", + "ybiH" + ] + ], + "dna_sequence": "ATGAATAATCCTGCCATGACAATCAAGGGTGAACAGGCGAAAAAACAGCTGATTGCTGCCGCACTGGCGCAGTTTGGTGAATATGGAATGAACGCCACCACTCGCGAGATAGCCGCCCAGGCCGGGCAGAATATCGCTGCCATCACCTACTACTTCGGTTCGAAAGAAGATTTGTACCTCGCCTGCGCCCAGTGGATTGCCGATTTTATTGGCGAGCAGTTCCGTCCGCATGCCGAGGAAGCCGAACGCTTGTTCGCGCAACCACAGCCTGATCGGGCTGCCATCCGTGAACTGATCCTTCGCGCCTGCAGGAACATGATTAAGCTGCTCACCCAGGATGACACCGTCAACCTCAGCAAGTTTATCTCCCGTGAGCAGCTCTCTCCCACGGCAGCCTACCACCTGGTGCACGAACAGGTGATTAGTCCGCTACACAGCCACCTGACACGCCTGATTGCCGCCTGGACCGGCTGCGACGCCAATGACACCCGCATGATCCTTCATACCCATGCGTTGATTGGTGAGATTCTGGCGTTCCGTCTTGGCAAAGAAACAATTCTGTTACGTACCGGCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGATTATCGCAAAGGAGTTTGTAG", + "dna_sequence_length": 672, + "functions": [ + "DUF1956 domain-containing tetR family putative transcriptional regulator" + ], + "id": "CDS_778", + "location": [ + [ + "NC_000913", + 830643, + "-", + 672 + ] + ], + "md5": "cc1645f054bbb7402ed2f4b6f4234fcf", + "parent_gene": "", + "protein_md5": "fbb94e456cf917e10ede5ffbb32bf5dd", + "protein_translation": "MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002719" + ], + [ + "gene_synonym", + "ECK0786" + ], + [ + "gene_synonym", + "EcoGene:EG11235" + ], + [ + "gene_synonym", + "GI:16128765" + ], + [ + "gene_synonym", + "GeneID:945425" + ], + [ + "gene_synonym", + "JW0781" + ], + [ + "gene_synonym", + "NP_415318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25888" + ], + [ + "gene_synonym", + "b0797" + ], + [ + "gene_synonym", + "rhlE" + ] + ], + "dna_sequence": "ATGTCTTTCGATTCTTTGGGTTTAAGCCCTGATATCCTGCGCGCCGTTGCCGAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTCATTCTTACCCCGACCCGTGAACTGGCGGCGCAGATTGGCGAAAACGTCCGTGATTACAGCAAATACCTGAACATTCGTTCGCTGGTGGTGTTTGGTGGTGTGAGTATTAACCCGCAGATGATGAAACTGCGTGGCGGCGTTGATGTGCTGGTGGCAACCCCGGGACGTTTGCTGGACCTGGAACATCAGAATGCAGTGAAGCTGGATCAGGTTGAAATCCTCGTCCTCGATGAAGCTGACCGCATGCTCGACATGGGCTTTATCCACGATATCCGTCGCGTGTTAACAAAACTACCTGCGAAGCGCCAGAACCTGTTATTCTCCGCGACCTTCTCTGACGATATTAAAGCCCTGGCGGAAAAACTGTTGCACAACCCGCTGGAAATCGAAGTGGCACGCCGCAATACCGCGTCTGATCAGGTGACCCAGCACGTTCACTTTGTCGATAAGAAACGCAAACGCGAATTGCTGTCGCACATGATTGGGAAAGGGAACTGGCAGCAGGTGCTGGTGTTTACCCGTACCAAACACGGCGCTAACCATCTGGCTGAACAGCTCAATAAAGATGGCATCCGTAGTGCGGCGATCCACGGCAATAAATCGCAAGGTGCGCGTACTCGTGCGCTGGCTGATTTTAAATCGGGCGATATTCGTGTACTGGTGGCAACTGACATCGCTGCGCGCGGCCTGGATATTGAAGAGCTGCCGCACGTCGTCAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGTCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCGGGCTATGAGCCGGACCCGTCAATCAAAGCCGAACCGATCCAGAACGGTCGCCAGCAACGTGGCGGCGGCGGTCGTGGGCAAGGTGGTGGTCGCGGTCAACAGCAACCACGCCGTGGGGAAGGTGGCGCAAAATCTGCAAGCGCGAAACCTGCAGAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAA", + "dna_sequence_length": 1365, + "functions": [ + "ATP-dependent RNA helicase" + ], + "id": "CDS_779", + "location": [ + [ + "NC_000913", + 830872, + "+", + 1365 + ] + ], + "md5": "261bc08644bcd1d56d47e6346d85d0ad", + "parent_gene": "", + "protein_md5": "c5aa0875f61949b2219c54d035af0ee4", + "protein_translation": "MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002722" + ], + [ + "gene_synonym", + "ECK0787" + ], + [ + "gene_synonym", + "EcoGene:EG11579" + ], + [ + "gene_synonym", + "GI:16128766" + ], + [ + "gene_synonym", + "GeneID:945426" + ], + [ + "gene_synonym", + "JW0783" + ], + [ + "gene_synonym", + "NP_415319.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30176" + ], + [ + "gene_synonym", + "b0798" + ], + [ + "gene_synonym", + "ybiA" + ] + ], + "dna_sequence": "ATGCCCGTTCGAGCACAAAGGATCCAACACGTCATGCAAGACACCATCATAAATTTCTACAGCACCAGCGATGACTACGGTGATTTTTCTAACTTTGCCGCCTGGCCCATCAAGGTTGACGGGAAAACCTGGCCTACCTCAGAACACTATTTTCAGGCACAAAAATTCCTTGATGAAAAATACCGCGAAGAGATCCGTCGGGTTTCTTCCCCTATGGTCGCCGCACGCATGGGGCGCGATCGTTCTAAGCCTCTGCGTAAAAACTGGGAGTCGGTCAAAGAACAGGTGATGCGAAAAGCACTTCGCGCTAAATTCGAACAGCATGCAGAACTGCGTGCGCTCTTGCTGGCAACCGCGCCCGCAAAACTGGTTGAGCATACGGAAAACGATGCTTACTGGGGAGACGGTGGTCATGGTAAGGGCAAGAATCGACTGGGCTACCTTTTAATGGAGTTGCGCGAACAATTGGCTATAGAGAAGTAA", + "dna_sequence_length": 483, + "functions": [ + "DUF1768 family protein" + ], + "id": "CDS_780", + "location": [ + [ + "NC_000913", + 832950, + "-", + 483 + ] + ], + "md5": "ac9420dc579bf39d624f4b07c273e6cc", + "parent_gene": "", + "protein_md5": "6d77f6ea6d1b0442df5f049eec76867b", + "protein_translation": "MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002732" + ], + [ + "gene_synonym", + "ECK0788" + ], + [ + "gene_synonym", + "EcoGene:EG11357" + ], + [ + "gene_synonym", + "GI:16128767" + ], + [ + "gene_synonym", + "GeneID:945431" + ], + [ + "gene_synonym", + "JW0784" + ], + [ + "gene_synonym", + "NP_415320.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27296" + ], + [ + "gene_synonym", + "b0799" + ], + [ + "gene_synonym", + "dinG" + ], + [ + "gene_synonym", + "rarB" + ] + ], + "dna_sequence": "ATGGCATTAACCGCCGCGCTTAAAGCGCAAATTGCCGCCTGGTATAAGGCGCTTCAGGAACAGATCCCCGACTTTATTCCCCGTGCGCCGCAGCGGCAGATGATTGCGGACGTCGCCAAAACGCTGGCCGGAGAAGAAGGGCGACATCTGGCGATTGAAGCCCCCACCGGCGTTGGGAAAACGCTCTCTTATTTGATTCCCGGCATCGCCATTGCCCGCGAAGAGCAAAAAACGCTGGTGGTGAGTACCGCCAACGTGGCATTGCAGGATCAGATTTACAGCAAAGATTTACCGCTGCTGAAAAAGATCATTCCCGATCTTAAATTCACTGCCGCTTTTGGGCGTGGGCGCTACGTTTGTCCGCGTAATCTGACGGCGCTCGCCAGTACTGAACCCACGCAACAGGATCTGCTGGCGTTTCTTGACGACGAACTGACGCCGAACAATCAGGAAGAGCAAAAACGTTGTGCGAAGCTGAAGGGCGATCTCGATACTTATAAATGGGATGGTCTGCGCGATCATACTGATATCGCTATAGATGACGATCTCTGGCGTCGTTTAAGTACCGACAAAGCCAGCTGCCTCAACCGCAATTGTTACTACTATCGTGAATGCCCGTTTTTTGTCGCTCGTCGGGAGATTCAGGAAGCGGAAGTGGTGGTGGCAAACCATGCGCTGGTGATGGCGGCGATGGAAAGCGAAGCGGTATTGCCTGACCCGAAAAATTTACTGCTGGTGCTGGACGAAGGCCATCACCTGCCGGATGTGGCGCGGGATGCGCTTGAGATGAGCGCCGAAATCACCGCGCCGTGGTATCGGCTACAGCTGGACTTGTTCACGAAACTGGTCGCTACCTGCATGGAGCAGTTTCGCCCGAAGACCATCCCACCGCTGGCGATCCCTGAACGTTTGAATGCGCATTGTGAAGAGTTGTATGAGCTTATCGCCTCGTTAAACAACATTCTCAATCTCTACATGCCTGCCGGGCAGGAGGCAGAGCACCGTTTTGCGATGGGCGAACTGCCAGATGAAGTGCTGGAGATCTGCCAGCGGCTGGCAAAACTCACCGAGATGCTGCGTGGCCTGGCGGAGTTATTTCTTAACGATTTAAGTGAGAAAACCGGCAGCCATGACATTGTACGTCTGCATCGGTTGATTTTGCAGATGAACCGCGCGTTGGGGATGTTCGAGGCGCAAAGCAAACTCTGGCGGCTGGCTTCGCTGGCGCAATCTTCCGGTGCACCGGTGACCAAATGGGCGACGCGGGAAGAGCGCGAAGGGCAGCTACACCTCTGGTTTCACTGCGTGGGAATACGTGTCAGCGATCAGCTGGAAAGGCTGCTGTGGCGCAGTATTCCGCACATTATTGTCACCTCCGCAACCTTGCGTTCGCTGAACAGTTTTTCGCGTTTGCAGGAGATGAGTGGTCTGAAAGAGAAAGCGGGCGACCGTTTTGTGGCGCTGGATTCCCCCTTTAACCACTGCGAACAGGGCAAAATTGTTATTCCCCGGATGCGCGTTGAGCCTTCCATCGACAACGAAGAGCAGCATATTGCCGAAATGGCGGCCTTTTTCCGTAAGCAGGTGGAGAGCAAAAAACATCTCGGTATGTTGGTACTGTTTGCCAGCGGACGGGCGATGCAGCGCTTTCTCGACTATGTGACGGATTTACGTCTGATGTTGCTGGTTCAGGGCGATCAGCCGCGTTACCGTTTAGTTGAACTGCACCGCAAACGCGTCGCCAACGGTGAGCGCAGCGTGCTGGTGGGCTTACAGTCATTTGCCGAAGGGCTTGATTTGAAAGGTGATCTGCTCAGCCAGGTGCATATCCACAAAATCGCTTTTCCGCCCATCGACAGCCCGGTGGTGATCACCGAAGGGGAATGGCTGAAAAGCCTCAACCGCTATCCGTTTGAGGTGCAAAGCCTGCCGAGCGCCTCGTTTAACCTGATTCAGCAGGTTGGGCGACTGATTCGAAGCCACGGTTGCTGGGGCGAAGTGGTTATCTACGACAAACGCTTGCTGACCAAAAATTATGGCAAGCGACTACTGGATGCATTACCGGTATTTCCGATAGAGCAACCGGAAGTCCCTGAAGGTATAGTTAAAAAGAAAGAAAAAACGAAATCCCCACGCCGTCGGCGGCGTTAA", + "dna_sequence_length": 2151, + "functions": [ + "ATP-dependent DNA helicase" + ], + "id": "CDS_781", + "location": [ + [ + "NC_000913", + 833070, + "+", + 2151 + ] + ], + "md5": "bdf405e81e3e730ce2e56ceb5b3b615d", + "parent_gene": "", + "protein_md5": "f1961c5a6f2852ef21ce220148bd0252", + "protein_translation": "MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR", + "protein_translation_length": 716, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002734" + ], + [ + "gene_synonym", + "ECK0789" + ], + [ + "gene_synonym", + "EcoGene:EG11580" + ], + [ + "gene_synonym", + "GI:16128768" + ], + [ + "gene_synonym", + "GeneID:945424" + ], + [ + "gene_synonym", + "JW0785" + ], + [ + "gene_synonym", + "NP_415321.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30177" + ], + [ + "gene_synonym", + "b0800" + ], + [ + "gene_synonym", + "ybiB" + ] + ], + "dna_sequence": "ATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTCCCTGACCTTGAGTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAA", + "dna_sequence_length": 963, + "functions": [ + "putative family 3 glycosyltransferase" + ], + "id": "CDS_782", + "location": [ + [ + "NC_000913", + 835248, + "+", + 963 + ] + ], + "md5": "89fc41c6973b2cbf3edd1e277b297229", + "parent_gene": "", + "protein_md5": "bf533f2aef1fdd0536d0754109696a77", + "protein_translation": "MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002738" + ], + [ + "gene_synonym", + "ECK0790" + ], + [ + "gene_synonym", + "EcoGene:EG11581" + ], + [ + "gene_synonym", + "GI:16128769" + ], + [ + "gene_synonym", + "GeneID:945412" + ], + [ + "gene_synonym", + "JW0786" + ], + [ + "gene_synonym", + "NP_415322.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30178" + ], + [ + "gene_synonym", + "b0801" + ], + [ + "gene_synonym", + "ybiC" + ] + ], + "dna_sequence": "ATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATTCAGGCTGTATTTCGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGTGGGTGAAAGCCTCGCCGCATGATGATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAGCAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCTAA", + "dna_sequence_length": 1086, + "functions": [ + "putative dehydrogenase" + ], + "id": "CDS_783", + "location": [ + [ + "NC_000913", + 836351, + "+", + 1086 + ] + ], + "md5": "286bc02c9bf17276762f2755d1112432", + "parent_gene": "", + "protein_md5": "b0eedceffb30f153ea5c8d7a52414dd8", + "protein_translation": "MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLAS", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002741" + ], + [ + "gene_synonym", + "ECK0791" + ], + [ + "gene_synonym", + "EcoGene:EG12422" + ], + [ + "gene_synonym", + "GI:16128770" + ], + [ + "gene_synonym", + "GeneID:945433" + ], + [ + "gene_synonym", + "JW0787" + ], + [ + "gene_synonym", + "NP_415323.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAX3" + ], + [ + "gene_synonym", + "b0802" + ], + [ + "gene_synonym", + "ybiJ" + ] + ], + "dna_sequence": "ATGAAAACTATCAATACTGTTGTTGCTGCTATGGCTCTTTCAACTCTGTCATTTGGCGTGTTCGCGGCGGAACCGGTAACGGCATCCCAGGCACAGAACATGAATAAAATCGGCGTGGTTTCTGCCGATGGCGCATCCACCCTCGATGCCCTGGAAGCGAAACTGGCTGAGAAAGCCGCGGCAGCCGGTGCCAGTGGATACAGCATCACTTCCGCCACCAACAACAATAAATTAAGCGGTACTGCGGTAATTTATAAGTAA", + "dna_sequence_length": 261, + "functions": [ + "DUF1471 family putative periplasmic protein" + ], + "id": "CDS_784", + "location": [ + [ + "NC_000913", + 837925, + "-", + 261 + ] + ], + "md5": "7aeee19785c726c12e5f96a86083975a", + "parent_gene": "", + "protein_md5": "abff3b4bc0880312dc5caa4a683d877d", + "protein_translation": "MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002744" + ], + [ + "gene_synonym", + "ECK0792" + ], + [ + "gene_synonym", + "EcoGene:EG12421" + ], + [ + "gene_synonym", + "GI:16128771" + ], + [ + "gene_synonym", + "GeneID:945434" + ], + [ + "gene_synonym", + "JW0788" + ], + [ + "gene_synonym", + "NP_415324.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41039" + ], + [ + "gene_synonym", + "b0803" + ], + [ + "gene_synonym", + "ybiI" + ] + ], + "dna_sequence": "ATGGCATCCGGTTGGGCTAACGATGACGCCGTCAACGAACAGATCAACAGTACAATTGAAGATGCGATTGCCCGCGCTCGGGGTGAAATTCCGCGCGGCGAAAGCCTGGATGAATGTGAAGAGTGCGGTGCCCCCATCCCGCAGGCCCGTCGGGAAGCCATTCCTGGCGTGCGCTTATGTATTCATTGTCAGCAGGAGAAAGATTTACAAAAACCAGCTTATACAGGATATAATCGCAGAGGTTCGAAAGACAGCCAGTTACGTTAA", + "dna_sequence_length": 267, + "functions": [ + "DksA-type zinc finger protein" + ], + "id": "CDS_785", + "location": [ + [ + "NC_000913", + 838456, + "-", + 267 + ] + ], + "md5": "b539b35b3145eec5f376fbd22b8ac3c1", + "parent_gene": "", + "protein_md5": "2d104461a69ff3e06333a7425b9ff25c", + "protein_translation": "MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002746" + ], + [ + "gene_synonym", + "ECK0793" + ], + [ + "gene_synonym", + "EcoGene:EG13316" + ], + [ + "gene_synonym", + "GI:90111170" + ], + [ + "gene_synonym", + "GeneID:947502" + ], + [ + "gene_synonym", + "JW5105" + ], + [ + "gene_synonym", + "NP_415325.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75779" + ], + [ + "gene_synonym", + "b0804" + ], + [ + "gene_synonym", + "ybiX" + ] + ], + "dna_sequence": "ATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCACCACCGGCGCACAAGGTGCGCAAGTTAAGAACAATCAACAGGTCGACACCCGCAGCACGTTATACGCCGCCCTGCAAAATGAGGTGCTGAACGCGGTTAACCAACATGCTTTATTCTTTGCCGCGGCCTTGCCGCGTACCCTTTCCACGCCGCTGTTTAATCGCTATCAGAACAATGAAACCTATGGTTTCCATGTGGATGGCGCAGTACGCAGCCATCCACAAAACGGCTGGATGCGTACTGACCTTTCTGCCACGCTGTTTTTAAGCGATCCACAAAGCTACGACGGCGGCGAACTGGTCGTTAATGACACCTTCGGACAACATCGGGTAAAACTCCCGGCAGGCGATCTCGTGTTGTATCCCTCCAGCAGCCTGCATTGCGTGACACCCGTAACCCGCGGCGTACGAGTGGCATCATTTATGTGGATCCAGTCGATGATCCGCGATGATAAAAAGCGCGCCATGCTGTTTGAACTGGACAACAATATTCAGTCGCTGAAAAGCCGCTACGGCGAAAGTGAAGAGATCCTGTCGCTGCTTAATCTTTATCATAATCTGCTGCGGGAATGGTCGGAGATCTGA", + "dna_sequence_length": 678, + "functions": [ + "Fe(II)-dependent oxygenase superfamily protein" + ], + "id": "CDS_786", + "location": [ + [ + "NC_000913", + 839207, + "-", + 678 + ] + ], + "md5": "4ae5ba01e9e9790a2a0d9eb0650473dc", + "parent_gene": "", + "protein_md5": "f5cb5c424de48462170a320fa4d4d2f4", + "protein_translation": "MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNLLREWSEI", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002749" + ], + [ + "gene_synonym", + "ECK0794" + ], + [ + "gene_synonym", + "EcoGene:EG13317" + ], + [ + "gene_synonym", + "GI:16128773" + ], + [ + "gene_synonym", + "GeneID:946246" + ], + [ + "gene_synonym", + "JW0790" + ], + [ + "gene_synonym", + "NP_415326.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75780" + ], + [ + "gene_synonym", + "b0805" + ], + [ + "gene_synonym", + "fiu" + ], + [ + "gene_synonym", + "ybiL" + ] + ], + "dna_sequence": "ATGGAAAACAATCGCAATTTCCCTGCCAGACAATTTCATTCGCTCACGTTCTTTGCCGGTCTTTGTATTGGCATCACGCCTGTGGCTCAGGCACTCGCCGCCGAAGGGCAAACTAACGCGGATGACACGCTGGTTGTCGAAGCATCAACGCCTTCGCTTTATGCGCCACAACAATCTGCCGATCCGAAATTCTCGCGTCCGGTAGCGGATACTACCCGCACGATGACGGTAATTTCTGAACAAGTGATTAAAGATCAGGGCGCAACCAACCTTACCGACGCGCTCAAAAACGTCCCCGGCGTGGGTGCGTTTTTTGCGGGTGAGAACGGTAACTCCACCACTGGCGACGCCATTTATATGCGTGGTGCCGATACCTCTAACAGTATTTATATTGATGGCATTCGCGATATCGGCAGCGTCTCGCGCGACACCTTCAATACCGAGCAGGTCGAAGTGATTAAAGGGCCGTCCGGCACCGACTACGGGCGCAGCGCACCGACAGGCTCGATCAATATGATCAGCAAGCAGCCGCGCAATGATTCCGGCATTGACGCCTCCGCCAGTATTGGCAGCGCCTGGTTCCGCCGCGGCACGCTGGACGTCAATCAGGTCATTGGTGATACCACCGCGGTGCGCCTGAATGTAATGGGCGAAAAAACGCACGATGCCGGACGCGACAAAGTCAAAAATGAGCGTTACGGCGTCGCCCCTTCTGTCGCTTTTGGCCTTGGTACAGCGAATCGTTTGTATCTTAATTATCTGCATGTCACCCAGCACAACACGCCAGACGGCGGCATTCCGACCATCGGTTTGCCGGGCTATTCTGCCCCATCTGCGGGAACGGCGGCCCTGAATCATTCCGGAAAAGTTGATACTCATAACTTTTACGGCACGGATTCCGATTACGACGATTCGACCACCGACACCGCCACCATGCGTTTTGAGCACGACATCAACGATAACACCACCATTCGCAATACTACCCGTTGGTCGCGCGTAAAGCAGGATTACCTGATGACGGCGATTATGGGCGGGGCGTCGAATATTACTCAGCCCACCAGCGATGTGAATAGCTGGACCTGGTCACGCACGGCGAATACCAAAGATGTGAGTAATAAAATTCTCACCAACCAGACCAACCTGACCTCGACGTTCTATACCGGTTCTATCGGTCATGATGTCAGTACCGGCGTGGAATTTACCCGTGAAACGCAGACTAACTACGGCGTTAATCCGGTGACGTTACCCGCGGTAAATATTTATCATCCTGACAGCAGCATTCATCCCGGCGGCCTGACGCGCAACGGCGCAAACGCCAATGGTCAGACGGATACCTTCGCAATTTACGCCTTTGATACGCTGCAAATCACCCGTGATTTTGAGCTGAACGGCGGGATCCGTCTGGATAATTATCATACTGAATATGACAGTGCCACCGCCTGCGGCGGCAGCGGACGCGGTGCCATCACCTGCCCAACTGGTGTGGCAAAAGGTTCTCCGGTCACCACCGTCGACACCGCCAAGTCGGGCAATCTGATGAACTGGAAAGCCGGGGCGCTGTATCACCTGACGGAAAACGGCAATGTCTATATTAACTATGCCGTTTCCCAGCAGCCTCCGGGCGGCAACAACTTCGCCCTTGCGCAGTCTGGCAGCGGTAACAGTGCCAACCGCACCGATTTTAAACCGCAAAAAGCCAACACCAGCGAGATTGGCACCAAATGGCAGGTTCTGGATAAACGTCTGTTGCTCACCGCCGCGCTGTTCCGCACTGATATCGAAAATGAAGTTGAGCAAAATGATGACGGAACTTACTCGCAATACGGTAAGAAACGCGTCGAAGGCTATGAGATATCCGTGGCCGGGAATATCACTCCCGCGTGGCAGGTGATTGGCGGCTATACCCAGCAAAAAGCAACCATCAAAAACGGCAAAGATGTTGCCCAGGATGGTTCCTCATCGCTGCCGTATACCCCGGAGCACGCCTTCACCTTATGGAGCCAATATCAGGCAACCGACGATATCTCTGTTGGCGCGGGCGCACGCTATATCGGCAGTATGCATAAAGGTTCAGACGGCGCGGTGGGAACGCCAGCGTTTACCGAAGGTTACTGGGTCGCCGATGCCAAACTGGGGTATCGAGTTAATCGCAATCTCGACTTCCAGCTAAACGTTTACAACCTGTTTGATACCGATTACGTCGCCTCAATCAACAAGAGCGGCTACCGTTATCACCCGGGCGAGCCAAGAACCTTCTTGCTCACAGCCAATATGCATTTCTGA", + "dna_sequence_length": 2283, + "functions": [ + "catecholate siderophore receptor" + ], + "id": "CDS_787", + "location": [ + [ + "NC_000913", + 841531, + "-", + 2283 + ] + ], + "md5": "c2bc89b4a594e74f853c9860cd424452", + "parent_gene": "", + "protein_md5": "6d9c657173835d3007724c52251fab67", + "protein_translation": "MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF", + "protein_translation_length": 760, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002753" + ], + [ + "gene_synonym", + "ECK0795" + ], + [ + "gene_synonym", + "EcoGene:EG13318" + ], + [ + "gene_synonym", + "GI:90111171" + ], + [ + "gene_synonym", + "GeneID:947523" + ], + [ + "gene_synonym", + "JW5106" + ], + [ + "gene_synonym", + "NP_415327.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAX6" + ], + [ + "gene_synonym", + "b0806" + ], + [ + "gene_synonym", + "mcbA" + ], + [ + "gene_synonym", + "ybiM" + ] + ], + "dna_sequence": "ATGAAAAAGTGCCTCACACTACTGATTGCCACCGTCCTGAGCGGAATCTCTCTCACGGCTTATGCCGCGCAACCGATGAGTAACCTGGACAGCGGTCAGCTACGGCCCGCCGGTACCGTTTCGGCAACTGGCGCATCAAACCTAAGCGATCTGGAGGATAAACTGGCAGAAAAAGCGCGCGAACAAGGCGCGAAAGGTTATGTCATTAATTCCGCAGGCGGAAATGACCAGATGTTCGGTACTGCAACCATCTACAAATAA", + "dna_sequence_length": 261, + "functions": [ + "colanic acid mucoidy stimulation protein" + ], + "id": "CDS_788", + "location": [ + [ + "NC_000913", + 842056, + "-", + 261 + ] + ], + "md5": "6070e1889e9e8b41b7ce7e8575d28685", + "parent_gene": "", + "protein_md5": "4e25ab31fd829d2217e93cea6d4d306d", + "protein_translation": "MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002757" + ], + [ + "gene_synonym", + "ECK0796" + ], + [ + "gene_synonym", + "EcoGene:EG13319" + ], + [ + "gene_synonym", + "GI:162135897" + ], + [ + "gene_synonym", + "GeneID:944938" + ], + [ + "gene_synonym", + "JW5107" + ], + [ + "gene_synonym", + "NP_415328.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75782" + ], + [ + "gene_synonym", + "b0807" + ], + [ + "gene_synonym", + "rlmF" + ], + [ + "gene_synonym", + "ybiN" + ] + ], + "dna_sequence": "ATGTCCGCCCAGAAACCGGGGTTGCATCCGCGCAACCGTCATCACAGCCGCTACGATCTCGCCACGCTTTGTCAGGTCAATCCTGAACTCAGGCAATTCCTCACGCTTACACCCGCCGGGGAGCAAAGCGTAGACTTTGCCAATCCGCTGGCGGTGAAGGCGCTCAATAAGGCGTTGCTGGCCCATTTTTACGCCGTAGCGAACTGGGATATCCCCGACGGTTTTCTCTGCCCACCAGTACCGGGCCGGGCGGATTATATTCATCACCTTGCCGATTTACTGGCAGAAGCAAGCGGAACAATTCCAGCGAATGCCAGCATTCTGGATATCGGCGTTGGTGCGAACTGTATTTATCCGCTGATTGGCGTACATGAATATGGCTGGCGTTTTACCGGTAGTGAAACCAGCAGCCAGGCGTTAAGCAGTGCGCAGGCGATTATCAGTTCTAATCCGGGGCTTAACCGCGCCATTCGTCTGCGTCGGCAAAAAGAGAGTGGGGCGATTTTTAACGGCATCATCCATAAAAACGAGCAATACGACGCGACCTTGTGTAACCCGCCATTCCACGATTCCGCCGCTGCGGCACGGGCAGGTAGTGAGCGTAAACGCCGTAACCTGGGGCTGAACAAAGACGATGCACTGAACTTTGGCGGCCAGCAACAGGAGTTGTGGTGTGAAGGCGGTGAAGTCACCTTTATCAAAAAGATGATTGAAGAGAGCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAA", + "dna_sequence_length": 927, + "functions": [ + "23S rRNA m(6)A1618 methyltransferase, SAM-dependent" + ], + "id": "CDS_789", + "location": [ + [ + "NC_000913", + 842332, + "+", + 927 + ] + ], + "md5": "6b3575a03a368a4401a225ffdc444468", + "parent_gene": "", + "protein_md5": "edd6edbdc16d132f8504a447e8bb8bd4", + "protein_translation": "MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002760" + ], + [ + "gene_synonym", + "ECK0797" + ], + [ + "gene_synonym", + "EcoGene:EG13320" + ], + [ + "gene_synonym", + "GI:90111173" + ], + [ + "gene_synonym", + "GeneID:945935" + ], + [ + "gene_synonym", + "JW5108" + ], + [ + "gene_synonym", + "NP_415329.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75783" + ], + [ + "gene_synonym", + "b0808" + ], + [ + "gene_synonym", + "ybiO" + ] + ], + "dna_sequence": "ATGCGGTGGATCCTGTTCATCCTCTTCTGCCTGCTGGGCGCACCTGCCCACGCGGTATCCATACCCGGCGTTACAACCACAACGACAACGGACTCAACGACTGAACCGGCCCCGGAACCGGATATCGAACAAAAAAAAGCGGCCTATGGCGCACTGGCGGATGTGCTGGATAATGACACCTCGCGTAAAGAGTTGATCGACCAGTTGCGCACCGTTGCCGCTACGCCCCCTGCTGAACCGGTACCAAAAATAGTGCCGCCGACGCTGGTCGAAGAGCAAACCGTGCTGCAAAAGGTCACCGAAGTCAGCCGCCATTATGGTGAAGCCCTTTCCGCCCGCTTCGGGCAACTTTATCGCAATATCACCGGCTCCCCGCATAAGCCGTTTAATCCACAAACCTTCAGCAATGCGCTGACCCATTTTTCAATGTTAGCGGTATTAGTGTTTGGTTTTTACTGGCTGATTCGCCTGTGCGCACTGCCGCTGTATCGCAAAATGGGTCAGTGGGCGCGGCAAAAAAATCGTGAGCGCAGCAACTGGTTGCAGCTTCCGGCGATGATTATCGGGGCGTTTATTATCGACCTGCTGTTACTGGCCCTGACATTATTTGTCGGCCAGGTATTAAGCGACAACCTGAATGCAGGCAGTCGCACCATCGCTTTCCAACAAAGTTTGTTTCTCAACGCCTTTGCCCTCATTGAATTTTTCAAAGCCGTACTACGCCTGATTTTTTGCCCAAACGTGGCGGAGCTGCGCCCGTTCACGATTCAGGACGAGAGCGCCCGTTACTGGAGTCGTCGCCTGAGCTGGTTAAGCAGTTTGATAGGTTATGGCCTGATTGTGGCCGTGCCGATTATCTCTAATCAGGTGAATGTACAGATAGGTGCGCTGGCGAACGTCATCATTATGCTGTGCATGACCGTCTGGGCGTTGTACCTGATCTTTCGTAATAAAAAAGAGATTACCCAGCATTTGCTCAACTTCGCGGAGCATTCGCTGGCCTTTTTCAGCCTGTTTATCCGCGCCTTTGCGCTGGTGTGGCACTGGCTGGCAAGCGCCTATTTTATCGTGCTGTTTTTCTTTTCGTTGTTCGATCCGGGCAACAGCCTGAAATTTATGATGGGTGCAACGGTGCGCAGCCTGGCGATTATTGGTATCGCAGCGTTTGTTTCCGGTATGTTTTCCCGCTGGCTGGCGAAAACCATCACTCTCTCGCCACATACTCAGCGTAACTATCCGGAGCTGCAAAAACGGTTGAATGGCTGGCTGTCGGCGGCGCTGAAAACGGCGCGTATTCTGACAGTCTGCGTGGCGGTAATGTTGCTGTTGAGCGCATGGGGATTGTTCGATTTCTGGAACTGGCTGCAAAACGGCGCGGGGCAGAAAACCGTAGATATCCTGATCCGTATCGCACTCATTCTTTTCTTCTCGGCGGTTGGCTGGACGGTGCTCGCCAGTTTGATCGAAAACCGGCTGGCTTCGGATATTCATGGCCGCCCGCTACCCAGCGCCCGCACGCGTACCCTGCTTACGCTGTTTCGTAACGCGCTGGCGGTGATTATCAGTACCATCACCATCATGATTGTGTTGTCGGAAATCGGCGTCAATATCGCGCCATTGCTGGCAGGTGCCGGGGCATTAGGTCTGGCTATCTCGTTTGGTTCGCAAACGCTGGTGAAAGATATTATCACCGGGGTATTTATTCAGTTTGAAAACGGCATGAACACTGGAGATTTGGTGACTATCGGGCCGTTGACCGGCACAGTGGAACGGATGTCGATTCGCTCCGTGGGCGTACGACAGGATACCGGGGCGTATCACATCATTCCGTGGTCTTCGATAACCACCTTTGCTAACTTTGTCCGCGGCATTGGTTCGGTGGTGGCAAATTATGATGTTGATCGCCATGAAGATGCTGATAAAGCCAATCAGGCACTGAAAGATGCGGTAGCGGAATTAATGGAAAACGAAGAAATTCGCGGGCTGATTATTGGTGAACCGAATTTTGCCGGGATTGTCGGCTTAAGCAATACCGCGTTTACACTGCGTGTTTCGTTCACCACGCTGCCACTCAAACAGTGGACGGTACGCTTTGCCCTCGACAGCCAGGTGAAAAAACATTTCGACCTGGCGGGCGTTCGCGCGCCAGTGCAGACTTATCAGGTGCTGCCTGCTCCGGGCGCGACCCCGGCTGAACCGTTACCGCCGGGGGAACCAACGCTTTAA", + "dna_sequence_length": 2226, + "functions": [ + "mechanosensitive channel protein, intermediate conductance" + ], + "id": "CDS_790", + "location": [ + [ + "NC_000913", + 845480, + "-", + 2226 + ] + ], + "md5": "f010ea2cf1009c601ea25fc96b73135e", + "parent_gene": "", + "protein_md5": "973cd34b5584760b1badc4f3c7afaa8a", + "protein_translation": "MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL", + "protein_translation_length": 741, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002764" + ], + [ + "gene_synonym", + "ECK0798" + ], + [ + "gene_synonym", + "EcoGene:EG10389" + ], + [ + "gene_synonym", + "GI:16128777" + ], + [ + "gene_synonym", + "GeneID:945435" + ], + [ + "gene_synonym", + "JW0794" + ], + [ + "gene_synonym", + "NP_415330.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10346" + ], + [ + "gene_synonym", + "b0809" + ], + [ + "gene_synonym", + "glnQ" + ] + ], + "dna_sequence": "GTGATTGAATTTAAAAACGTCTCCAAGCACTTTGGCCCAACCCAGGTGCTGCACAATATCGATTTGAACATTGCCCAGGGCGAAGTCGTGGTGATTATCGGGCCGTCCGGTTCCGGTAAATCGACCCTGCTGCGCTGCATCAACAAACTGGAAGAAATCACCTCCGGCGATCTGATTGTCGATGGCCTGAAGGTTAACGATCCGAAAGTTGACGAGCGCCTGATTCGCCAGGAAGCAGGTATGGTGTTCCAGCAGTTTTACCTCTTCCCGCATCTGACAGCGCTGGAAAACGTCATGTTTGGCCCGCTACGCGTGCGTGGCGCGAACAAAGAAGAGGCGGAAAAACTGGCACGTGAGCTGCTGGCGAAAGTCGGTCTGGCAGAACGTGCACATCACTACCCTTCCGAACTTTCTGGTGGTCAACAGCAGCGTGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTTGATGAACCGACTTCCGCTCTTGACCCGGAACTGCGCCATGAAGTGCTGAAGGTTATGCAGGATCTGGCTGAAGAAGGGATGACGATGGTGATCGTGACCCACGAAATCGGTTTTGCCGAGAAAGTAGCTTCGCGGCTGATCTTTATCGACAAAGGCCGGATTGCGGAAGATGGCAATCCGCAGGTGTTGATCAAGAACCCGCCGAGCCAGCGCTTGCAGGAATTTTTGCAGCACGTCTCTTAA", + "dna_sequence_length": 723, + "functions": [ + "glutamine transporter subunit" + ], + "id": "CDS_791", + "location": [ + [ + "NC_000913", + 846463, + "-", + 723 + ] + ], + "md5": "20d42bd0d4b0be6a14b623f84de7e39c", + "parent_gene": "", + "protein_md5": "7c55c3d50507cda11af3cf0be83bf025", + "protein_translation": "MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKNPPSQRLQEFLQHVS", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002766" + ], + [ + "gene_synonym", + "ECK0799" + ], + [ + "gene_synonym", + "EcoGene:EG10388" + ], + [ + "gene_synonym", + "GI:16128778" + ], + [ + "gene_synonym", + "GeneID:945621" + ], + [ + "gene_synonym", + "JW0795" + ], + [ + "gene_synonym", + "NP_415331.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEQ6" + ], + [ + "gene_synonym", + "b0810" + ], + [ + "gene_synonym", + "glnP" + ] + ], + "dna_sequence": "ATGCAGTTTGACTGGAGTGCCATCTGGCCTGCCATTCCGCTTCTGATTGAAGGTGCCAAAATGACCCTGTGGATTTCGGTCCTCGGTCTGGCAGGCGGTCTGGTAATCGGATTGCTGGCAGGTTTTGCACGCACCTTCGGAGGTTGGATAGCCAACCACGTCGCGCTGGTCTTTATTGAAGTGATCCGCGGCACACCTATCGTCGTCCAGGTGATGTTTATTTATTTCGCCCTGCCGATGGCGTTTAACGACTTACGCATCGACCCATTTACTGCGGCGGTGGTCACCATCATGATCAACTCCGGCGCGTATATTGCGGAAATCACGCGTGGTGCGGTGCTGTCTATCCACAAAGGTTTTCGTGAAGCAGGACTGGCGCTCGGTCTTTCACGTTGGGAAACCATTCGCTACGTCATTTTACCGCTGGCACTGCGTCGTATGCTGCCGCCGCTGGGTAACCAGTGGATCATCAGCATTAAAGACACCTCGCTGTTTATTGTGATCGGCGTGGCGGAACTGACCCGTCAGGGGCAAGAAATTATTGCCGGTAACTTCCGCGCCCTTGAGATCTGGAGCGCCGTGGCGGTGTTCTATCTGATTATTACCCTGGTGCTGAGCTTTATTCTGCGTCGTCTGGAAAGAAGGATGAAAATCCTGTGA", + "dna_sequence_length": 660, + "functions": [ + "glutamine transporter subunit" + ], + "id": "CDS_792", + "location": [ + [ + "NC_000913", + 847119, + "-", + 660 + ] + ], + "md5": "e087eec8bc921a71b23885d826851e7b", + "parent_gene": "", + "protein_md5": "23b8aa955e966f3380b21e304332387f", + "protein_translation": "MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002771" + ], + [ + "gene_synonym", + "ECK0800" + ], + [ + "gene_synonym", + "EcoGene:EG10386" + ], + [ + "gene_synonym", + "GI:16128779" + ], + [ + "gene_synonym", + "GeneID:944872" + ], + [ + "gene_synonym", + "JW0796" + ], + [ + "gene_synonym", + "NP_415332.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEQ3" + ], + [ + "gene_synonym", + "b0811" + ], + [ + "gene_synonym", + "glnH" + ] + ], + "dna_sequence": "ATGAAGTCTGTATTAAAAGTTTCACTGGCTGCACTGACCCTGGCTTTTGCGGTTTCTTCTCATGCCGCGGATAAAAAATTAGTTGTCGCGACGGATACCGCCTTCGTTCCGTTTGAATTTAAACAGGGCGATAAATATGTGGGCTTTGACGTTGATCTGTGGGCTGCCATCGCTAAAGAGCTGAAGCTGGATTACGAACTGAAGCCGATGGATTTCAGTGGGATCATTCCGGCACTGCAAACCAAAAACGTCGATCTGGCGCTGGCGGGCATTACCATCACCGACGAGCGTAAAAAAGCGATCGATTTCTCTGACGGCTACTACAAAAGCGGCCTGTTAGTGATGGTGAAAGCTAACAATAACGATGTGAAAAGCGTGAAAGATCTCGACGGGAAAGTGGTTGCTGTGAAGAGCGGTACTGGCTCCGTTGATTACGCGAAAGCAAACATCAAAACTAAAGATCTGCGTCAGTTCCCGAACATCGATAACGCCTATATGGAACTGGGCACCAACCGCGCAGACGCCGTTCTGCACGATACGCCAAACATTCTGTACTTCATCAAAACCGCCGGTAACGGTCAGTTCAAAGCGGTAGGTGACTCTCTGGAAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCGTGACAAAGTCAACGGCGCGTTGAAAACCCTGCGCGAGAACGGAACTTACAACGAAATCTACAAAAAATGGTTCGGTACTGAACCGAAATAA", + "dna_sequence_length": 747, + "functions": [ + "glutamine transporter subunit" + ], + "id": "CDS_793", + "location": [ + [ + "NC_000913", + 848004, + "-", + 747 + ] + ], + "md5": "de8c023754b14101445556ef30883e0b", + "parent_gene": "", + "protein_md5": "91e1fc09c4c0571f784e7272bf3d625a", + "protein_translation": "MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002776" + ], + [ + "gene_synonym", + "ECK0801" + ], + [ + "gene_synonym", + "EcoGene:EG11415" + ], + [ + "gene_synonym", + "GI:16128780" + ], + [ + "gene_synonym", + "GeneID:945101" + ], + [ + "gene_synonym", + "JW0797" + ], + [ + "gene_synonym", + "NP_415333.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABT2" + ], + [ + "gene_synonym", + "b0812" + ], + [ + "gene_synonym", + "dps" + ], + [ + "gene_synonym", + "pexB" + ], + [ + "gene_synonym", + "vtm" + ] + ], + "dna_sequence": "ATGAGTACCGCTAAATTAGTTAAATCAAAAGCGACCAATCTGCTTTATACCCGCAACGATGTCTCCGACAGCGAGAAAAAAGCAACAGTAGAGTTGCTGAATCGCCAGGTTATCCAGTTTATTGATCTTTCTTTGATTACCAAACAAGCGCACTGGAACATGCGCGGCGCTAACTTCATTGCCGTACATGAAATGCTGGATGGCTTCCGCACCGCACTGATCGATCATCTGGATACCATGGCAGAACGTGCAGTGCAGCTGGGCGGTGTAGCTCTGGGGACCACTCAAGTTATCAACAGCAAAACCCCGCTGAAAAGTTACCCGCTGGACATCCACAACGTTCAGGATCACCTGAAAGAACTGGCTGACCGTTACGCAATCGTCGCTAATGACGTACGCAAAGCGATTGGCGAAGCGAAAGATGACGACACCGCAGATATCCTGACCGCCGCGTCTCGCGACCTGGATAAATTCCTGTGGTTTATCGAGTCTAACATCGAATAA", + "dna_sequence_length": 504, + "functions": [ + "Fe-binding and storage protein", + "stress-inducible DNA-binding protein" + ], + "id": "CDS_794", + "location": [ + [ + "NC_000913", + 848911, + "-", + 504 + ] + ], + "md5": "c79541d2f51893a7135e6a62b3721fca", + "parent_gene": "", + "protein_md5": "36aa46c3c11c46dd41f216524ccbb299", + "protein_translation": "MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002779" + ], + [ + "gene_synonym", + "ECK0802" + ], + [ + "gene_synonym", + "EcoGene:EG12134" + ], + [ + "gene_synonym", + "GI:16128781" + ], + [ + "gene_synonym", + "GeneID:947045" + ], + [ + "gene_synonym", + "JW0798" + ], + [ + "gene_synonym", + "NP_415334.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA67" + ], + [ + "gene_synonym", + "b0813" + ], + [ + "gene_synonym", + "rhtA" + ], + [ + "gene_synonym", + "ybiF" + ] + ], + "dna_sequence": "ATGCCTGGTTCATTACGTAAAATGCCGGTCTGGTTACCAATAGTCATATTGCTCGTTGCCATGGCGTCTATTCAGGGTGGAGCCTCGTTAGCTAAGTCACTTTTTCCTCTGGTGGGCGCACCGGGTGTCACTGCGCTGCGTCTGGCATTAGGAACGCTGATCCTCATCGCGTTCTTTAAGCCATGGCGACTGCGCTTTGCCAAAGAGCAACGGTTACCGCTGTTGTTTTACGGCGTTTCGCTGGGTGGGATGAATTATCTTTTTTATCTTTCTATTCAGACAGTACCGCTGGGTATTGCGGTGGCGCTGGAGTTCACCGGACCACTGGCGGTGGCGCTGTTCTCTTCTCGTCGCCCGGTAGATTTCGTCTGGGTTGTGCTGGCGGTTCTTGGTCTGTGGTTCCTGCTACCGCTGGGGCAAGACGTTTCCCATGTCGATTTAACCGGCTGTGCGCTGGCACTGGGGGCCGGGGCTTGTTGGGCTATTTACATTTTAAGTGGGCAACGCGCAGGAGCGGAACATGGCCCTGCGACGGTGGCAATTGGTTCGTTGATTGCAGCGTTAATTTTCGTGCCAATTGGAGCGCTTCAGGCTGGTGAAGCACTCTGGCACTGGTCGGTTATTCCATTGGGTCTGGCTGTCGCTATTCTCTCGACCGCTCTGCCTTATTCGCTGGAAATGATTGCCCTCACCCGTTTGCCAACACGGACATTTGGTACGCTGATGAGCATGGAACCGGCGCTGGCTGCCGTTTCCGGGATGATTTTCCTCGGAGAAACACTGACACCCATACAGCTACTGGCGCTCGGCGCTATCATCGCCGCTTCAATGGGGTCTACGCTGACAGTACGCAAAGAGAGCAAAATAAAAGAATTAGACATTAATTAA", + "dna_sequence_length": 888, + "functions": [ + "threonine and homoserine efflux system" + ], + "id": "CDS_795", + "location": [ + [ + "NC_000913", + 850097, + "-", + 888 + ] + ], + "md5": "1f3512911e4c5652024d595515b7dd04", + "parent_gene": "", + "protein_md5": "8091372ffb1e79ebbdf2a52a58fbf354", + "protein_translation": "MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVTALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAASMGSTLTVRKESKIKELDIN", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002784" + ], + [ + "gene_synonym", + "ECK0803" + ], + [ + "gene_synonym", + "EcoGene:EG12135" + ], + [ + "gene_synonym", + "GI:16128782" + ], + [ + "gene_synonym", + "GeneID:944967" + ], + [ + "gene_synonym", + "JW0799" + ], + [ + "gene_synonym", + "NP_415335.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A917" + ], + [ + "gene_synonym", + "b0814" + ], + [ + "gene_synonym", + "ompX" + ], + [ + "gene_synonym", + "ybiG" + ] + ], + "dna_sequence": "ATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTCAGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTACACCGAGAAAAGCCGTACTGCAAGCTCTGGTGACTACAACAAAAACCAGTACTACGGCATCACTGCTGGTCCGGCTTACCGCATTAACGACTGGGCAAGCATCTACGGTGTAGTGGGTGTGGGTTATGGTAAATTCCAGACCACTGAATACCCGACCTACAAACACGACACCAGCGACTACGGTTTCTCCTACGGTGCGGGTCTGCAGTTCAACCCGATGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAA", + "dna_sequence_length": 516, + "functions": [ + "outer membrane protein X" + ], + "id": "CDS_796", + "location": [ + [ + "NC_000913", + 850450, + "+", + 516 + ] + ], + "md5": "c7fee4c9437d2aa3c5fbbe1a443e57a2", + "parent_gene": "", + "protein_md5": "1f42062652e327a66a7fccdab455504e", + "protein_translation": "MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002786" + ], + [ + "gene_synonym", + "ECK0804" + ], + [ + "gene_synonym", + "EcoGene:EG13321" + ], + [ + "gene_synonym", + "GI:16128783" + ], + [ + "gene_synonym", + "GeneID:945360" + ], + [ + "gene_synonym", + "JW0800" + ], + [ + "gene_synonym", + "NP_415336.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75785" + ], + [ + "gene_synonym", + "b0815" + ], + [ + "gene_synonym", + "opgE" + ], + [ + "gene_synonym", + "ybiP" + ] + ], + "dna_sequence": "ATGAATTTAACCCTCAAAGAATCGCTTGTTACCCGTAGCCGGGTATTTAGCCCGTGGACTGCGTTCTACTTTTTACAGTCGCTATTAATTAACCTCGGCTTAGGTTACCCCTTCAGTTTGCTCTACACCGCTGCGTTTACGGCTATTTTGCTTTTGCTATGGCGAACATTGCCTCGCGTACAAAAAGTTCTGGTCGGTGTCAGTTCGCTGGTGGCGGCTTGTTATTTCCCTTTTGCTCAGGCCTACGGCGCGCCTAATTTCAATACATTGCTGGCATTGCACTCCACCAATATGGAAGAGTCGACCGAAATCCTGACGATTTTTCCGTGGTACAGCTACCTGGTCGGCTTATTTATTTTTGCGCTCGGCGTAATAGCAATCAGGCGAAAAAAAGAGAATGAAAAAGCGCGCTGGAATACCTTCGACAGCCTGTGTCTGGTATTCAGTGTGGCGACATTTTTTGTTGCTCCCGTGCAAAACCTGGCCTGGGGTGGCGTATTTAAACTGAAAGATACTGGCTATCCGGTATTTCGTTTTGCTAAGGATGTCATCGTCAATAATAACGAGGTGATTGAAGAGCAAGAACGGATGGCAAAACTTTCCGGAATGAAAGATACCTGGACGGTCACTGCCGTTAAGCCGAAGTATCAGACCTATGTGGTGGTGATCGGTGAAAGCGCGCGTCGCGATGCCCTCGGTGCCTTTGGCGGTCACTGGGACAATACCCCGTTTGCCAGCAGCGTTAACGGTTTGATATTTGCTGACTACATTGCCGCCAGTGGCTCCACGCAGAAATCGCTTGGCTTAACGCTCAATCGCGTTGTCGATGGCAAACCACAGTTTCAGGATAACTTTGTCACCCTGGCAAATCGCGCGGGCTTCCAGACCTGGTGGTTTTCCAACCAGGGTCAAATCGGCGAATACGATACCGCTATCGCCAGCATCGCCAAACGAGCAGATGAAGTGTACTTCCTGAAAGAAGGTAATTTTGAAGCAGATAAAAACACCAAAGACGAAGCGTTACTGGATATGACCGCTCAAGTGCTGGCGCAAGAGCACTCGCAACCGCAGCTGATTGTTCTACATCTGATGGGCTCACATCCGCAGGCCTGCGACAGGACACAAGGAAAATACGAAACCTTTGTGCAATCGAAAGAAACGTCGTGCTATCTCTATACCATGACGCAAACGGACGATTTACTGCGCAAGCTGTACGATCAGTTACGCAACAGCGGCAGCAGCTTCTCGCTGGTTTACTTTTCTGACCACGGTCTGGCCTTTAAAGAGCGCGGTAAAGACGTGCAATACCTTGCCCATGATGATAAATATCAGCAAAATTTCCAGGTGCCTTTTATGGTCATTTCCAGCGACGATAAAGCGCATCGTGTGATTAAAGCCCGCCGCTCAGCCAATGACTTCTTAGGCTTTTTCTCCCAGTGGACGGGGATTAAAGCGAAGGAAATTAACATCAAATACCCGTTTATATCTGAGAAGAAAGCCGGGCCGATATACATCACCAACTTCCAGTTACAGAAGGTGGATTACAACCATCTCGGAACCGATATTTTCGACCCGAAACCTTAA", + "dna_sequence_length": 1584, + "functions": [ + "OPG biosynthetic transmembrane phosphoethanolamine transferase" + ], + "id": "CDS_797", + "location": [ + [ + "NC_000913", + 852597, + "-", + 1584 + ] + ], + "md5": "86625a26ac0fb1e2219e55e0c98138ef", + "parent_gene": "", + "protein_md5": "40d4e1ed75e2940532daedd454bd6801", + "protein_translation": "MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP", + "protein_translation_length": 527, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4517" + ], + [ + "gene_synonym", + "EcoGene:EG14500" + ], + [ + "gene_synonym", + "GI:635341463" + ], + [ + "gene_synonym", + "GeneID:14678509" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0DKB3" + ], + [ + "gene_synonym", + "YP_009029995.1" + ], + [ + "gene_synonym", + "b4705" + ], + [ + "gene_synonym", + "mntS" + ], + [ + "gene_synonym", + "rybA" + ] + ], + "dna_sequence": "ATGAATGAGTTCAAGAGGTGTATGCGCGTGTTTAGTCATTCTCCCTTTAAAGTACGGTTAATGCTGCTCTCTATGTTGTGCGATATGGTCAACAACAAACCGCAGCAAGATAAACCTTCCGATAAATAG", + "dna_sequence_length": 129, + "functions": [ + "Mn(2)-response protein, MntR-repressed" + ], + "id": "CDS_798", + "location": [ + [ + "NC_000913", + 852997, + "-", + 129 + ] + ], + "md5": "532c736b2c3f366a671437ddf5de7a16", + "parent_gene": "", + "protein_md5": "94721a244e15a58e469f359676d70d5e", + "protein_translation": "MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK", + "protein_translation_length": 42, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002793" + ], + [ + "gene_synonym", + "ECK0807" + ], + [ + "gene_synonym", + "EcoGene:EG13322" + ], + [ + "gene_synonym", + "GI:16128785" + ], + [ + "gene_synonym", + "GeneID:945437" + ], + [ + "gene_synonym", + "JW0801" + ], + [ + "gene_synonym", + "NP_415338.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9F1" + ], + [ + "gene_synonym", + "b0817" + ], + [ + "gene_synonym", + "mntR" + ], + [ + "gene_synonym", + "ybiQ" + ] + ], + "dna_sequence": "ATGAGTCGTCGCGCAGGTACGCCAACAGCAAAAAAAGTGACGCAGTTAGTGAACGTGGAAGAGCACGTTGAAGGGTTCCGCCAGGTCAGAGAGGCGCATCGGCGCGAGCTTATTGATGATTACGTTGAGCTGATTTCTGACTTGATCAGGGAAGTGGGGGAAGCTCGTCAGGTGGACATGGCTGCTCGTCTGGGAGTTTCGCAACCGACGGTGGCTAAAATGCTTAAGCGGCTGGCAACCATGGGGCTGATTGAAATGATCCCCTGGCGTGGCGTGTTTTTAACGGCAGAAGGAGAGAAGCTGGCGCAGGAAAGCCGCGAGCGACATCAGATAGTCGAAAATTTCTTGTTGGTGTTGGGCGTCAGTCCGGAAATCGCCCGTCGCGACGCGGAAGGCATGGAGCACCATGTTAGTGAAGAGACGCTCGACGCTTTTCGTTTGTTTACCCAGAAACACGGTGCCAAATGA", + "dna_sequence_length": 468, + "functions": [ + "Mn(2+)-responsive manganese regulon transcriptional regulator" + ], + "id": "CDS_799", + "location": [ + [ + "NC_000913", + 853183, + "+", + 468 + ] + ], + "md5": "cb5432c699273f16be4b8c90e6423008", + "parent_gene": "", + "protein_md5": "7b71740b12a1db903033d68260a33d5b", + "protein_translation": "MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002795" + ], + [ + "gene_synonym", + "ECK0808" + ], + [ + "gene_synonym", + "EcoGene:EG13323" + ], + [ + "gene_synonym", + "GI:16128786" + ], + [ + "gene_synonym", + "GeneID:945438" + ], + [ + "gene_synonym", + "JW0802" + ], + [ + "gene_synonym", + "NP_415339.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75788" + ], + [ + "gene_synonym", + "b0818" + ], + [ + "gene_synonym", + "ybiR" + ] + ], + "dna_sequence": "ATGAGCCTGCCTTTTTTACGCACGCTGCAAGGCGATCGTTTTTTTCAGTTATTAATTCTTGTTGGTATCGGATTAAGCTTTTTCGTGCCCTTTGCACCGAAATCCTGGCCTGCTGCTATCGACTGGCACACCATCATCACCTTAAGCGGCCTGATGCTGCTGACCAAAGGTGTGGAGTTAAGCGGTTATTTTGATGTGCTGGGGCGCAAAATGGTGCGCCGCTTTGCTACGGAGCGTCGGCTGGCGATGTTTATGGTGCTGGCGGCGGCGCTGCTTTCTACCTTTCTGACCAACGATGTCGCGCTGTTTATTGTTGTTCCGCTGACTATCACGCTAAAAAGACTGTGTGAGATCCCGGTTAATCGGCTGATTATTTTTGAGGCGCTGGCAGTCAACGCTGGTTCGCTACTGACGCCAATTGGCAACCCGCAAAATATTCTTATCTGGGGACGTTCTGGTCTTTCGTTTGCCGGATTTATTGCCCAAATGGCACCGCTGGCTGGCGCAATGATGCTGACGCTCCTGCTCCTGTGCTGGTGTTGTTTCCCTGGAAAGGCGATGCAATACCATACGGGGGTGCAAACACCGGAGTGGAAACCGCGGCTGGTGTGGAGTTGTCTGGGGCTGTATATCGTCTTTCTGACGGCGCTGGAGTTCAAACAAGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAG", + "dna_sequence_length": 1119, + "functions": [ + "putative transporter" + ], + "id": "CDS_800", + "location": [ + [ + "NC_000913", + 853647, + "+", + 1119 + ] + ], + "md5": "833c29251476cac70c6d294c006763a1", + "parent_gene": "", + "protein_md5": "8078487707ef5c65c7b25c94e19b1c5f", + "protein_translation": "MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVALFIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFIAQMAPLAGAMMLTLLLLCWCCFPGKAMQYHTGVQTPEWKPRLVWSCLGLYIVFLTALEFKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVSHLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLVWAVNVGGFGLLPGSLANLIALRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002797" + ], + [ + "gene_synonym", + "ECK0809" + ], + [ + "gene_synonym", + "EcoGene:EG13324" + ], + [ + "gene_synonym", + "GI:16128787" + ], + [ + "gene_synonym", + "GeneID:945441" + ], + [ + "gene_synonym", + "JW0803" + ], + [ + "gene_synonym", + "NP_415340.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAX8" + ], + [ + "gene_synonym", + "b0819" + ], + [ + "gene_synonym", + "ldtB" + ], + [ + "gene_synonym", + "ybiS" + ] + ], + "dna_sequence": "ATGAATATGAAATTGAAAACATTATTCGCAGCGGCCTTCGCTGTTGTCGGCTTTTGCAGTACCGCCTCTGCGGTAACTTATCCTCTGCCAACCGACGGGAGTCGCCTGGTTGGTCAGAATCAGGTGATCACCATTCCTGAAGGTAACACTCAGCCGCTGGAGTATTTTGCCGCCGAGTACCAGATGGGGCTTTCCAATATGATGGAAGCGAACCCGGGTGTGGATACCTTCCTGCCGAAAGGCGGTACTGTACTGAACATTCCGCAGCAGCTGATCCTGCCGGATACCGTTCATGAAGGCATCGTCATTAACAGTGCTGAGATGCGTCTTTATTACTATCCGAAAGGGACCAACACCGTTATCGTGCTGCCGATCGGCATTGGTCAGTTAGGCAAAGATACGCCTATCAACTGGACCACCAAAGTTGAGCGTAAAAAAGCAGGCCCGACCTGGACGCCGACCGCCAAAATGCACGCAGAGTACCGCGCTGCGGGCGAACCGCTTCCGGCTGTCGTTCCGGCAGGTCCGGATAACCCGATGGGGCTGTATGCACTCTATATCGGTCGCCTGTATGCTATCCATGGCACCAACGCCAACTTCGGTATCGGCCTGCGTGTAAGTCATGGTTGTGTGCGTCTGCGTAACGAAGACATCAAATTCCTGTTCGAGAAAGTACCGGTCGGTACCCGCGTACAGTTTATTGATGAGCCGGTAAAAGCGACCACCGAGCCAGACGGCAGCCGTTATATTGAAGTCCATAACCCGCTGTCTACCACCGAAGCCCAGTTTGAAGGTCAGGAAATTGTGCCAATTACCCTGACGAAGAGCGTGCAGACAGTGACCGGTCAGCCAGATGTTGACCAGGTTGTTCTTGATGAAGCGATTAAAAACCGCTCCGGGATGCCGGTTCGTCTGAATTAA", + "dna_sequence_length": 921, + "functions": [ + "L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_801", + "location": [ + [ + "NC_000913", + 855744, + "-", + 921 + ] + ], + "md5": "694bfdfae5c1f5b5ed6e5085e896e6ef", + "parent_gene": "", + "protein_md5": "72687302febc400acb6aaa54e09d2bef", + "protein_translation": "MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002801" + ], + [ + "gene_synonym", + "ECK0810" + ], + [ + "gene_synonym", + "EcoGene:EG13325" + ], + [ + "gene_synonym", + "GI:16128788" + ], + [ + "gene_synonym", + "GeneID:945440" + ], + [ + "gene_synonym", + "JW0804" + ], + [ + "gene_synonym", + "NP_415341.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9U3" + ], + [ + "gene_synonym", + "b0820" + ], + [ + "gene_synonym", + "ybiT" + ] + ], + "dna_sequence": "GTGTTAGTTTCCAGTAACGTCACCATGCAGTTCGGCAGTAAGCCGTTGTTTGAAAACATTTCCGTCAAATTTGGCGGCGGCAACCGTTACGGCCTGATTGGCGCGAACGGTAGTGGTAAATCCACCTTTATGAAGATCCTCGGCGGCGACCTTGAGCCGACGCTGGGTAACGTTTCCCTCGATCCCAACGAGCGCATTGGTAAACTGCGTCAGGATCAGTTTGCCTTTGAAGAGTTCACTGTGCTGGATACGGTGATCATGGGGCATAAAGAGTTGTGGGAAGTGAAGCAGGAGCGCGACCGCATCTATGCTTTGCCGGAAATGAGTGAAGAAGACGGCTATAAAGTGGCCGATCTGGAAGTTAAATACGGCGAAATGGACGGTTACTCTGCGGAAGCTCGCGCCGGTGAACTGTTGCTTGGCGTGGGAATTCCAGTGGAACAGCACTACGGCCCGATGAGTGAAGTTGCTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGAACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAACGTCTGCTGGCCGATAACGCCAAGAAGAAAGCGCAGATTGCTGAGTTGCAATCTTTCGTTAGCCGCTTTAGCGCCAACGCCTCGAAATCTCGCCAGGCAACTTCGCGCGCGCGCCAGATTGATAAAATCAAACTGGAAGAGGTGAAAGCCTCCAGCCGTCAGAACCCGTTCATCCGTTTTGAACAGGATAAGAAACTGTTCCGTAACGCGCTGGAAGTGGAAGGTCTGACCAAAGGGTTTGATAACGGTCCGCTGTTTAAAAATCTCAACCTGCTGCTGGAAGTGGGTGAAAAACTGGCGGTACTGGGTACCAACGGCGTCGGTAAATCAACGCTGCTGAAAACGCTGGTGGGCGATCTGCAACCGGACAGCGGCACCGTAAAATGGTCTGAGAACGCGCGCATTGGTTACTATGCTCAGGACCACGAATATGAGTTTGAAAATGATCTGACCGTGTTCGAATGGATGAGCCAGTGGAAGCAGGAAGGCGATGACGAGCAGGCGGTACGCAGTATTCTCGGTCGTTTGCTGTTCAGCCAGGACGACATCAAAAAGCCAGCTAAAGTGCTTTCCGGTGGGGAAAAAGGGCGGATGCTGTTTGGTAAGTTAATGATGCAGAAGCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGCTGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAA", + "dna_sequence_length": 1593, + "functions": [ + "ABC-F family putative regulatory ATPase" + ], + "id": "CDS_802", + "location": [ + [ + "NC_000913", + 855963, + "+", + 1593 + ] + ], + "md5": "2aa1e65af443256450ca319ef97a454d", + "parent_gene": "", + "protein_md5": "d277b45738920b638acde3ad66f9bac9", + "protein_translation": "MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE", + "protein_translation_length": 530, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002804" + ], + [ + "gene_synonym", + "ECK0811" + ], + [ + "gene_synonym", + "EcoGene:EG13326" + ], + [ + "gene_synonym", + "GI:16128789" + ], + [ + "gene_synonym", + "GeneID:945439" + ], + [ + "gene_synonym", + "JW0805" + ], + [ + "gene_synonym", + "NP_415342.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75791" + ], + [ + "gene_synonym", + "b0821" + ], + [ + "gene_synonym", + "ybiU" + ] + ], + "dna_sequence": "ATGGCTTCTACTTTTACCAGCGACACATTGCCTGCCGATCACAAAGCAGCTATCCGTCAGATGAAGCACGCGCTGCGGGCGCAGCTTGGCGACGTCCAGCAGATCTTTAATCAGCTAAGCGATGACATTGCCACGCGAGTGGCTGAAATCAACGCACTCAAAGCACAGGGCGATGCCGTCTGGCCGGTGCTGTCTTATGCCGATATCAAAGCAGGTCATGTTACTGCAGAGCAGCGCGAACAGATTAAACGTCGCGGTTGTGCGGTGATAAAAGGCCATTTCCCCCGCGAACAAGCGCTAGGCTGGGATCAGTCGATGCTGGACTATCTGGACCGCAACCGCTTTGACGAGGTCTACAAAGGCCCCGGCGATAATTTCTTCGGGACGCTCAGCGCTTCACGTCCCGAGATTTACCCCATCTACTGGTCGCAGGCGCAAATGCAGGCCCGCCAGAGTGAAGAAATGGCGAATGCGCAGTCGTTTCTCAATCGTCTGTGGACATTTGAAAGTGATGGAAAGCAATGGTTTAACCCGGATGTGAGCGTCATCTACCCTGACCGTATCCGCCGCCGTCCGCCCGGAACGACCTCCAAAGGTCTTGGAGCGCATACCGACTCCGGGGCACTGGAACGCTGGCTGCTTCCAGCGTATCAGCGCGTTTTCGCCAACGTCTTTAATGGCAATCTGGCGCAATATGATCCCTGGCATGCGGCACATCGTACGGAAGTTGAAGAGTACACGGTGGACAACACCACCAAATGTTCCGTGTTTCGGACATTCCAGGGCTGGACAGCGCTCTCTGATATGCTGCCTGGTCAGGGGCTGCTGCACGTCGTGCCCATTCCTGAAGCTATGGCGTACGTACTGTTACGTCCGCTGCTTGATGATGTGCCGGAGGATGAACTGTGCGGCGTAGCGCCCGGAAGAGTATTGCCGGTATCAGAGCAATGGCATCCACTGTTGATTGAGGCGTTAACCAGCATTCCAAAACTCGAAGCCGGAGACTCCGTCTGGTGGCACTGCGACGTCATCCATTCCGTTGCCCCCGTTGAAAATCAACAAGGTTGGGGCAACGTGATGTACATTCCTGCGGCACCGATGTGCGAGAAAAATCTTGCCTACGCGCACAAGGTGAAGGCCGCACTGGAAAAAGGCGCATCGCCGGGCGACTTCCCGCGCGAGGACTATGAAACAAACTGGGAAGGACGCTTTACGCTTGCCGACCTCAACATTCACGGTAAGCGAGCGTTGGGCATGGATGTTTGA", + "dna_sequence_length": 1266, + "functions": [ + "DUF1479 family protein" + ], + "id": "CDS_803", + "location": [ + [ + "NC_000913", + 859061, + "-", + 1266 + ] + ], + "md5": "06beb28243686f6c3581302dec79a212", + "parent_gene": "", + "protein_md5": "42f0729f16c0ba45bb1517418f0feaa7", + "protein_translation": "MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMDV", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002807" + ], + [ + "gene_synonym", + "ECK0812" + ], + [ + "gene_synonym", + "EcoGene:EG13327" + ], + [ + "gene_synonym", + "GI:16128790" + ], + [ + "gene_synonym", + "GeneID:945432" + ], + [ + "gene_synonym", + "JW0806" + ], + [ + "gene_synonym", + "NP_415343.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75792" + ], + [ + "gene_synonym", + "b0822" + ], + [ + "gene_synonym", + "supH" + ], + [ + "gene_synonym", + "ybiV" + ] + ], + "dna_sequence": "ATGAGCGTAAAAGTTATCGTCACAGACATGGACGGTACTTTTCTTAACGACGCCAAAACGTACAACCAACCACGTTTTATGGCGCAATATCAGGAACTGAAAAAGCGCGGCATTAAGTTCGTTGTTGCCAGCGGTAATCAGTATTACCAGCTTATTTCATTCTTTCCTGAGCTAAAGGATGAGATCTCTTTTGTCGCGGAAAACGGCGCACTGGTTTACGAACATGGCAAGCAGTTGTTCCACGGCGAACTGACCCGACATGAATCGCGGATTGTTATTGGCGAGTTGCTAAAAGATAAGCAACTCAATTTTGTCGCCTGCGGTCTGCAAAGTGCATATGTCAGCGAAAATGCCCCCGAAGCATTTGTCGCACTGATGGCAAAACACTACCATCGCCTGAAACCTGTAAAAGATTATCAGGAGATTGACGACGTACTGTTCAAGTTTTCGCTCAACCTGCCGGATGAACAAATCCCGTTAGTGATCGACAAACTGCACGTAGCGCTCGATGGCATTATGAAACCCGTTACCAGTGGTTTTGGCTTTATCGACCTGATTATTCCCGGTCTACATAAAGCAAACGGTATTTCGCGGTTACTGAAACGCTGGGATCTGTCACCGCAAAATGTGGTAGCGATTGGCGACAGCGGTAACGATGCGGAGATGCTGAAAATGGCGCGTTATTCCTTTGCGATGGGCAATGCTGCGGAAAACATTAAACAAATCGCCCGTTACGCTACCGATGATAATAATCATGAAGGCGCGCTGAATGTGATTCAGGCGGTGCTGGATAACACATCCCCTTTTAACAGCTGA", + "dna_sequence_length": 816, + "functions": [ + "sugar phosphatase", + "fructose-1-P/ribose-5-P/glucose-6-P phosphatase" + ], + "id": "CDS_804", + "location": [ + [ + "NC_000913", + 860028, + "-", + 816 + ] + ], + "md5": "5cd3e67454f54dec43bdd8b2bea674d5", + "parent_gene": "", + "protein_md5": "3b2c55884d5bf82f5e0399197e3ae062", + "protein_translation": "MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002810" + ], + [ + "gene_synonym", + "ECK0813" + ], + [ + "gene_synonym", + "EcoGene:EG13328" + ], + [ + "gene_synonym", + "GI:16128791" + ], + [ + "gene_synonym", + "GeneID:945444" + ], + [ + "gene_synonym", + "JW0807" + ], + [ + "gene_synonym", + "NP_415344.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75793" + ], + [ + "gene_synonym", + "b0823" + ], + [ + "gene_synonym", + "pflF" + ], + [ + "gene_synonym", + "ybiW" + ] + ], + "dna_sequence": "ATGACCACACTGAAACTGGACACGCTCAGCGACCGCATTAAAGCGCACAAAAATGCGCTGGTGCATATTGTGAAACCGCCAGTCTGTACCGAGCGCGCGCAGCACTATACCGAGATGTATCAACAACATCTCGATAAGCCGATCCCGGTACGTCGCGCGCTGGCACTGGCGCATCACCTGGCGAATCGCACCATCTGGATCAAACACGATGAGTTGATCATTGGCAACCAGGCAAGCGAAGTTCGCGCCGCGCCGATCTTCCCGGAATATACTGTCTCGTGGATCGAAAAAGAGATTGATGATCTGGCAGATCGTCCCGGTGCTGGCTTTGCGGTGAGCGAAGAGAACAAACGCGTTCTGCATGAAGTGTGCCCGTGGTGGCGCGGTCAGACCGTACAGGATCGCTGCTACGGCATGTTTACCGATGAGCAAAAAGGTCTGCTGGCGACCGGAATCATTAAAGCGGAAGGCAATATGACCTCCGGCGATGCGCACCTGGCGGTGAATTTCCCGCTGCTGCTGGAAAAAGGGCTTGATGGTCTGCGCGAGGAAGTAGCGGAACGTCGCTCGCGCATCAACCTGACGGTGCTGGAAGATTTACACGGTGAGCAATTCCTGAAAGCGATTGATATCGTGCTGGTGGCAGTCAGTGAACACATTGAACGTTTCGCTGCCCTGGCGCGTGAAATGGCCGCGACCGAAACCCGCGAAAGCCGTCGCGATGAACTGCTGGCGATGGCAGAAAACTGCGATCTTATCGCCCACCAGCCGCCGCAGACTTTCTGGCAGGCGCTGCAACTGTGTTACTTCATCCAGTTGATTTTGCAGATCGAATCTAACGGTCACTCAGTATCGTTTGGTCGTATGGACCAGTATCTCTACCCGTACTATCGCCGCGACGTTGAACTCAACCAGACGCTGGATCGCGAACACGCCATCGAGATGCTGCATAGCTGCTGGCTGAAACTGCTGGAAGTGAACAAGATCCGCTCCGGCTCACACTCAAAAGCCTCTGCGGGAAGTCCGCTGTATCAGAACGTCACTATTGGCGGGCAAAATCTGGTTGATGGTCAACCAATGGACGCGGTGAATCCACTCTCTTACGCGATCCTCGAATCCTGCGGTCGCCTGCGTTCCACTCAGCCTAACCTCAGCGTGCGTTACCATGCAGGAATGAGCAACGATTTCCTCGACGCCTGCGTACAGGTGATCCGTTGCGGCTTCGGGATGCCGGCGTTCAACAACGACGAAATCGTGATCCCGGAATTTATTAAACTCGGTATTGAACCGCAGGACGCTTATGACTACGCAGCGATTGGTTGTATAGAAACCGCCGTCGGTGGCAAATGGGGCTATCGCTGTACCGGCATGAGCTTTATCAACTTCGCCCGCGTGATGCTGGCGGCGCTGGAAGGCGGGCATGATGCCACCAGCGGCAAAGTGTTCCTGCCACAAGAAAAAGCGTTGTCGGCAGGTAACTTCAACAACTTCGATGAAGTGATGGACGCGTGGGATACGCAAATCCGTTACTACACCCGCAAATCAATCGAAATCGAATATGTCGTCGACACCATGCTGGAAGAGAACGTGCACGATATTCTCTGCTCGGCGCTGGTGGATGACTGTATTGAGCGAGCGAAAAGTATCAAGCAAGGCGGCGCGAAATATGACTGGGTTTCTGGCCTGCAGGTCGGCATTGCCAACCTCGGCAACAGCCTGGCGGCAGTGAAGAAACTGGTGTTTGAACAAGGTGCGATTGGTCAGCAACAGCTTGCTGCCGCACTGGCAGATGACTTCGACGGCCTGACTCACGAGCAGCTGCGTCAGCGGCTGATTAACGGTGCGCCGAAGTACGGCAACGACGATGATACTGTCGATACGCTGCTGGCTCGCGCTTATCAGACCTATATCGACGAACTGAAACAGTACCATAATCCGCGCTACGGTCGTGGTCCGGTTGGCGGCAACTATTACGCGGGTACGTCATCAATCTCCGCTAACGTACCGTTTGGCGCGCAGACTATGGCAACACCGGACGGGCGTAAAGCCCACACCCCGCTGGCAGAAGGCGCAAGCCCGGCCTCCGGTACTGACCATCTTGGCCCTACTGCGGTCATTGGCTCAGTGGGTAAACTGCCTACGGCAGCGATTCTCGGCGGCGTGTTGCTCAACCAGAAACTGAATCCGGCAACGCTGGAGAACGAATCTGACAAGCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCGTTTCCCGCGAAACGCTGCTGGATGCGAAAAAACATCCCGATCAGTATCGCGATCTGGTAGTGCGTGTCGCGGGCTATTCCGCGTTCTTCACCGCGCTCTCTCCAGACGCTCAGGACGATATCATCGCCCGTACTGAACATATGCTGTAA", + "dna_sequence_length": 2433, + "functions": [ + "putative pyruvate formate lyase" + ], + "id": "CDS_805", + "location": [ + [ + "NC_000913", + 862606, + "-", + 2433 + ] + ], + "md5": "2140773692d0fde07c64676f4b113f9b", + "parent_gene": "", + "protein_md5": "5c95f1a56c79ff50768ac2a10faaddea", + "protein_translation": "MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDGLREEVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGHDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDAQDDIIARTEHML", + "protein_translation_length": 810, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002812" + ], + [ + "gene_synonym", + "ECK0814" + ], + [ + "gene_synonym", + "EcoGene:EG13470" + ], + [ + "gene_synonym", + "GI:226524704" + ], + [ + "gene_synonym", + "GeneID:945445" + ], + [ + "gene_synonym", + "JW0808" + ], + [ + "gene_synonym", + "NP_415345.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75794" + ], + [ + "gene_synonym", + "b0824" + ], + [ + "gene_synonym", + "pflE" + ], + [ + "gene_synonym", + "ybiY" + ] + ], + "dna_sequence": "ATGATTTTCAATATTCAGCGCTACTCGACCCATGATGGCCCCGGTATCCGCACGGTCGTATTTCTTAAAGGCTGTTCGCTGGGCTGCCGCTGGTGTCAGAACCCGGAAAGCCGCGCCCGCACGCAGGATCTGCTGTATGACGCACGACTGTGTCTGGAAGGCTGCGAGCTGTGCGCTAAGGCCGCGCCGGAAGTGATTGAGCGCGCGCTGAATGGTTTGCTTATTCATCGGGAAAAGTTAACCCCGGAGCATCTGACGGCGTTAACCGACTGCTGTCCGACACAGGCATTAACCGTGTGTGGTGAAGTGAAAAGCGTTGAGGAGATCATGACGACCGTTCTGCGCGATAAACCGTTTTACGATCGCAGCGGCGGCGGTTTAACGCTTTCGGGTGGTGAGCCCTTTATGCAGCCGGAAATGGCGATGGCGCTACTGCAAGCCAGCCACGAGGCAGGCATTCATACTGCGGTAGAAACCTGTCTGCATGTGCCGTGGAAATATATCGCCCCTTCTCTGCCCTATATCGATCTGTTTCTTGCCGATTTAAAACACGTTGCCGACGCGCCGTTTAAACAGTGGACCGACGGTAACGCCGCCAGAGTGCTGGATAACCTGAAAAAACTCGCCGCAGCGGGCAAAAAAATCATTATCCGCGTGCCGCTGATTCAGGGCTTTAATGCCGACGAAACCTCTGTAAAAGCCATTACCGATTTTGCCGCCGACGAGCTGCACGTTGGCGAAATTCATTTTCTGCCCTACCACACGCTGGGCATCAACAAATATCACTTACTTAATCTGCCCTATGACGCCCCGGAAAAACCGCTTGATGCGCCAGAACTGCTCGACTTTGCCCAGCAGTATGCCTGCCAGAAAGGGTTAACCGCGACCTTACGAGGATAA", + "dna_sequence_length": 900, + "functions": [ + "putative pyruvate formate lyase activating enzyme" + ], + "id": "CDS_806", + "location": [ + [ + "NC_000913", + 863511, + "-", + 900 + ] + ], + "md5": "94fd4f81314a8bf080f3dde8923363a6", + "parent_gene": "", + "protein_md5": "b75dc7ec0c93952cb1b3e306aeae6a9a", + "protein_translation": "MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDLLYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGEVKSVEEIMTTVLRDKPFYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAVETCLHVPWKYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIRVPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLDAPELLDFAQQYACQKGLTATLRG", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002818" + ], + [ + "gene_synonym", + "ECK0815" + ], + [ + "gene_synonym", + "EcoGene:EG13471" + ], + [ + "gene_synonym", + "GI:90111174" + ], + [ + "gene_synonym", + "GeneID:945449" + ], + [ + "gene_synonym", + "JW5109" + ], + [ + "gene_synonym", + "NP_415346.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78055" + ], + [ + "gene_synonym", + "b0825" + ], + [ + "gene_synonym", + "fsaA" + ], + [ + "gene_synonym", + "mipB" + ], + [ + "gene_synonym", + "ybiZ" + ] + ], + "dna_sequence": "ATGGAACTGTATCTGGATACTTCAGACGTTGTTGCGGTGAAGGCGCTGTCACGTATTTTTCCGCTGGCGGGTGTGACCACTAACCCAAGCATTATCGCCGCGGGTAAAAAACCGCTGGATGTTGTGCTTCCGCAACTTCATGAAGCGATGGGCGGTCAGGGGCGTCTGTTTGCCCAGGTAATGGCTACCACTGCCGAAGGGATGGTTAATGACGCGCTTAAGCTGCGTTCTATTATTGCGGATATCGTGGTGAAAGTTCCGGTGACCGCCGAGGGGCTGGCAGCTATTAAGATGTTAAAAGCGGAAGGGATTCCGACGCTGGGAACCGCGGTATATGGCGCAGCACAAGGGCTGCTGTCGGCGCTGGCAGGTGCGGAATATGTTGCGCCTTACGTTAATCGTATTGATGCTCAGGGCGGTAGCGGCATTCAGACTGTGACCGACTTACACCAGTTATTGAAAATGCATGCGCCGCAGGCGAAAGTGCTGGCAGCGAGTTTCAAAACCCCGCGTCAGGCGCTGGACTGCTTACTGGCAGGATGTGAATCAATTACTCTGCCACTGGATGTGGCACAACAGATGATTAGCTATCCGGCGGTTGATGCCGCTGTGGCGAAGTTTGAGCAGGACTGGCAGGGAGCGTTTGGCAGAACGTCGATTTAA", + "dna_sequence_length": 663, + "functions": [ + "fructose-6-phosphate aldolase 1" + ], + "id": "CDS_807", + "location": [ + [ + "NC_000913", + 863642, + "+", + 663 + ] + ], + "md5": "5c974f81e088821139e3474dcfeb2cf8", + "parent_gene": "", + "protein_md5": "8bf60ff4a252319a1b889b66e4ab2040", + "protein_translation": "MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRTSI", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002820" + ], + [ + "gene_synonym", + "ECK0816" + ], + [ + "gene_synonym", + "EcoGene:EG10154" + ], + [ + "gene_synonym", + "GI:16128794" + ], + [ + "gene_synonym", + "GeneID:945452" + ], + [ + "gene_synonym", + "JW0810" + ], + [ + "gene_synonym", + "NP_415347.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12282" + ], + [ + "gene_synonym", + "b0826" + ], + [ + "gene_synonym", + "chlN" + ], + [ + "gene_synonym", + "moeB" + ] + ], + "dna_sequence": "ATGGCGGAACTCAGCGATCAGGAGATGCTGCGCTACAACCGGCAAATCATTCTGCGCGGCTTTGATTTTGACGGCCAGGAGGCGCTGAAAGATTCTCGCGTGCTGATAGTGGGCCTGGGCGGCCTCGGCTGTGCAGCCTCGCAGTATCTGGCAAGCGCCGGTGTCGGTAACCTGACGCTGCTCGACTTCGACACGGTTTCGCTCTCGAATCTGCAACGCCAGACACTGCACAGTGATGCCACGGTCGGGCAACCGAAGGTGGAATCCGCCCGTGACGCCCTGACGCGGATCAACCCACATATCGCGATTACGCCAGTCAATGCACTGCTGGATGACGCAGAACTTGCAGCATTGATTGCTGAACACGATCTGGTGCTCGACTGTACGGATAACGTTGCGGTACGTAATCAACTGAACGCAGGCTGTTTTGCCGCGAAGGTACCGCTGGTTTCCGGCGCGGCAATTCGTATGGAAGGTCAAATCACCGTCTTTACTTATCAGGACGGTGAACCGTGCTATCGCTGCCTTAGCCGTTTGTTTGGTGAAAATGCATTAACCTGCGTGGAAGCAGGCGTAATGGCACCGTTGATCGGCGTAATTGGTTCGTTGCAGGCAATGGAAGCGATCAAAATGCTGGCAGGTTATGGCAAACCGGCCAGCGGGAAAATCGTCATGTACGATGCGATGACCTGTCAGTTTCGCGAAATGAAACTGATGCGTAATCCGGGGTGTGAGGTGTGTGGGCAGTAA", + "dna_sequence_length": 750, + "functions": [ + "molybdopterin synthase sulfurylase" + ], + "id": "CDS_808", + "location": [ + [ + "NC_000913", + 865129, + "-", + 750 + ] + ], + "md5": "5486ee291bacc4f2db1bde30744f81f6", + "parent_gene": "", + "protein_md5": "98b2e1906ad65f44045755ea010c6c0f", + "protein_translation": "MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002823" + ], + [ + "gene_synonym", + "ECK0817" + ], + [ + "gene_synonym", + "EcoGene:EG10153" + ], + [ + "gene_synonym", + "GI:16128795" + ], + [ + "gene_synonym", + "GeneID:945454" + ], + [ + "gene_synonym", + "JW0811" + ], + [ + "gene_synonym", + "NP_415348.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12281" + ], + [ + "gene_synonym", + "b0827" + ], + [ + "gene_synonym", + "bisB" + ], + [ + "gene_synonym", + "chlE" + ], + [ + "gene_synonym", + "moeA" + ], + [ + "gene_synonym", + "narE" + ] + ], + "dna_sequence": "ATGGAATTTACCACCGGATTGATGTCGCTCGACACCGCGCTTAATGAGATGCTTTCTCGCGTCACCCCACTGACCGCCCAGGAAACGCTGCCACTGGTACAGTGTTTTGGTCGTATTCTGGCGAGCGATGTCGTTTCGCCGCTTGATGTTCCGGGGTTTGATAACTCCGCAATGGACGGCTACGCGGTGCGTTTAGCCGATATTGCCTCCGGGCAACCGCTGCCCGTTGCCGGTAAATCCTTTGCCGGTCAGCCATACCATGGTGAATGGCCTGCGGGTACCTGCATTCGTATTATGACCGGTGCGCCGGTGCCGGAAGGCTGCGAAGCGGTGGTGATGCAGGAGCAGACTGAACAAATGGACAATGGCGTGCGTTTTACTGCTGAAGTGCGTAGCGGGCAAAATATTCGCCGTCGCGGTGAAGATATCTCTGCAGGTGCGGTTGTTTTCCCGGCGGGAACTCGCCTGACTACCGCAGAGCTGCCAGTAATTGCTTCACTGGGGATTGCCGAAGTTCCGGTGATTCGTAAAGTGCGTGTAGCGCTTTTTTCTACCGGTGATGAACTCCAGTTGCCCGGTCAGCCGCTGGGCGACGGCCAAATCTACGATACCAACCGTCTCGCCGTACACCTGATGTTAGAACAGTTGGGATGCGAGGTAATTAACTTAGGGATTATCCGCGACGATCCCCATGCCCTGCGCGCCGCATTTATTGAAGCCGACAGCCAGGCGGATGTGGTGATCAGTTCCGGCGGTGTTTCAGTGGGTGAGGCGGATTACACCAAAACGATTCTTGAAGAGCTGGGGGAGATCGCCTTCTGGAAGCTGGCGATTAAACCAGGTAAACCGTTCGCGTTCGGTAAACTCAGCAATAGCTGGTTCTGCGGCCTGCCGGGCAACCCGGTTTCAGCGACGCTGACCTTCTATCAACTGGTACAGCCTTTGCTGGCAAAACTAAGCGGTAACACCGCCAGCGGCCTGCCCGCGCGCCAGCGCGTACGCACAGCGTCCCGCCTGAAAAAAACGCCAGGACGTCTTGATTTCCAGCGCGGCGTGCTGCAACGCAACGCCGATGGCGAACTGGAAGTGACGACCACCGGACATCAGGGTTCACATATATTTAGCTCCTTTAGCCTCGGCAACTGCTTTATCGTGCTGGAACGCGATCGCGGCAATGTGGAAGTGGGCGAATGGGTGGAAGTAGAACCGTTTAACGCGTTGTTCGGAGGCCTGTAA", + "dna_sequence_length": 1236, + "functions": [ + "molybdopterin molybdenumtransferase", + "molybdopterin biosynthesis protein" + ], + "id": "CDS_809", + "location": [ + [ + "NC_000913", + 866364, + "-", + 1236 + ] + ], + "md5": "f376ca6d8b51d547e4587f99e315e4dd", + "parent_gene": "", + "protein_md5": "984c81a6e816c2b6307b69dadffc4109", + "protein_translation": "MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFGGL", + "protein_translation_length": 411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002828" + ], + [ + "gene_synonym", + "ECK0818" + ], + [ + "gene_synonym", + "EcoGene:EG12407" + ], + [ + "gene_synonym", + "GI:16128796" + ], + [ + "gene_synonym", + "GeneID:945456" + ], + [ + "gene_synonym", + "JW0812" + ], + [ + "gene_synonym", + "NP_415349.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37595" + ], + [ + "gene_synonym", + "b0828" + ], + [ + "gene_synonym", + "iaaA" + ], + [ + "gene_synonym", + "spt" + ], + [ + "gene_synonym", + "ybiK" + ] + ], + "dna_sequence": "ATGGGCAAAGCAGTCATTGCAATTCATGGTGGCGCAGGTGCAATTAGCCGCGCGCAGATGAGTCTGCAACAGGAATTACGCTACATCGAGGCGTTGTCTGCCATTGTTGAAACCGGGCAGAAAATGCTGGAAGCGGGCGAAAGTGCGCTGGATGTGGTGACGGAAGCGGTGCGTCTGCTGGAAGAGTGTCCACTGTTTAACGCCGGAATTGGCGCTGTCTTTACGCGTGATGAAACCCATGAACTGGACGCCTGTGTGATGGATGGTAACACCCTGAAAGCCGGTGCGGTGGCGGGCGTTAGTCATCTGCGTAATCCGGTTCTTGCCGCCCGGCTGGTGATGGAGCAAAGCCCGCATGTGATGATGATTGGCGAAGGGGCAGAAAATTTTGCGTTTGCTCGTGGCATGGAGCGCGTCTCGCCGGAGATTTTCTCCACGTCTTTGCGTTATGAACAACTACTGGCAGCGCGCAAGGAAGGGGCAACCGTCCTCGACCATAGCGGTGCGCCACTGGATGAAAAACAGAAAATGGGCACCGTGGGGGCCGTGGCGTTGGATTTAGACGGCAATTTGGCGGCAGCCACGTCCACAGGCGGAATGACCAATAAATTACCCGGACGAGTTGGCGATAGTCCCTTAGTGGGTGCCGGATGCTACGCCAATAACGCCAGTGTGGCGGTTTCTTGTACCGGCACGGGCGAAGTCTTCATCCGCGCGCTGGCGGCATATGACATCGCCGCGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGA", + "dna_sequence_length": 966, + "functions": [ + "Isoaspartyl peptidase" + ], + "id": "CDS_810", + "location": [ + [ + "NC_000913", + 866568, + "+", + 966 + ] + ], + "md5": "b39584270cc7038a3a4d3485b8918904", + "parent_gene": "", + "protein_md5": "c67a29edefdc542bc4580ef88e2e7f92", + "protein_translation": "MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002830" + ], + [ + "gene_synonym", + "ECK0819" + ], + [ + "gene_synonym", + "EcoGene:EG13472" + ], + [ + "gene_synonym", + "GI:145698235" + ], + [ + "gene_synonym", + "GeneID:945457" + ], + [ + "gene_synonym", + "JW5897" + ], + [ + "gene_synonym", + "NP_415350.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75796" + ], + [ + "gene_synonym", + "b0829" + ], + [ + "gene_synonym", + "gsiA" + ], + [ + "gene_synonym", + "yliA" + ] + ], + "dna_sequence": "TTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGACCAGCAGAAAATAGCTGCGGTCCGCAATCTCTCTTTTAGTCTGCAACGCGGTGAGACGCTGGCAATTGTTGGCGAATCCGGCTCCGGTAAGTCAGTGACTGCGTTGGCATTGATGCGCCTGTTGGAACAGGCGGGCGGTTTAGTACAGTGCGATAAAATGCTGTTGCAGCGGCGCAGTCGCGAAGTGATTGAACTTAGCGAGCAGAACGCTGCACAAATGCGCCATGTTCGCGGTGCGGATATGGCGATGATATTTCAGGAGCCGATGACATCGCTGAACCCGGTATTTACTGTGGGTGAACAGATTGCCGAATCAATTCGTCTGCATCAGAACGCCAGTCGTGAAGAAGCGATGGTCGAGGCGAAGCGGATGCTGGATCAGGTACGCATTCCTGAGGCACAAACCATTCTTTCACGTTATCCGCATCAACTCTCTGGCGGGATGCGCCAGCGAGTGATGATTGCGATGGCGCTGTCATGCCGCCCGGCGGTGCTGATTGCCGATGAGCCAACCACCGCGCTGGATGTCACTATTCAGGCGCAGATCCTGCAATTAATCAAAGTATTGCAAAAAGAGATGTCGATGGGCGTTATCTTTATCACTCACGATATGGGCGTGGTGGCAGAGATTGCCGATCGGGTACTGGTGATGTATCAGGGCGAGGCGGTGGAAACGGGTACCGTCGAACAGATTTTTCATGCACCGCAACATCCTTACACCCGTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTGTTGAATCGCGTAACGCGGGAAGTGCATGCCGTTGAGAAAGTCAGTTTTGATCTCTGGCCTGGCGAAACGCTATCGCTGGTGGGCGAGTCTGGCAGCGGTAAATCCACTACCGGGCGGGCGTTGCTGCGCCTGGTCGAATCGCAGGGCGGCGAAATTATCTTTAACGGTCAGCGAATCGATACCTTGTCACCCGGCAAACTTCAGGCATTACGCCGGGATATTCAGTTTATTTTTCAGGACCCTTACGCTTCGCTGGACCCACGTCAGACCATCGGTGATTCGATTATCGAACCGCTGCGTGTACACGGTTTATTGCCAGGTAAAGACGCGGCTGCACGCGTTGCGTGGTTGCTGGAGCGCGTGGGCCTGTTACCTGAACATGCCTGGCGTTACCCGCATGAGTTTTCCGGCGGTCAGCGCCAGCGCATCTGCATTGCTCGCGCGTTGGCATTGAATCCAAAAGTGATCATTGCCGACGAAGCCGTTTCGGCGCTGGATGTTTCTATTCGCGGGCAGATTATCAACTTGTTGCTCGATCTCCAGCGTGATTTCGGCATTGCGTATCTGTTTATCTCCCACGATATGGCGGTGGTAGAGCGGATTAGTCATCGTGTGGCGGTGATGTATCTCGGGCAAATTGTTGAAATTGGTCCACGGCGCGCGGTCTTCGAAAACCCGCAGCATCCTTATACGCGTAAATTACTGGCGGCAGTTCCGGTCGCTGAACCGTCCCGACAACGACCGCAGCGTGTACTGCTGTCGGACGATCTTCCCAGCAATATTCATCTGCGTGGCGAAGAGGTGGCAGCCGTCTCGTTGCAATGCGTCGGGCCGGGGCATTACGTCGCACAACCACAATCAGAATACGCATTCATGCGTAGATAA", + "dna_sequence_length": 1872, + "functions": [ + "glutathione ABC transporter ATPase" + ], + "id": "CDS_811", + "location": [ + [ + "NC_000913", + 867520, + "+", + 1872 + ] + ], + "md5": "60107da24a884b3c834c23f4d6f7896f", + "parent_gene": "", + "protein_md5": "1ba77bd28c886a8e51c93fb31eeba44b", + "protein_translation": "MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR", + "protein_translation_length": 623, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002832" + ], + [ + "gene_synonym", + "ECK0820" + ], + [ + "gene_synonym", + "EcoGene:EG13473" + ], + [ + "gene_synonym", + "GI:16128798" + ], + [ + "gene_synonym", + "GeneID:945459" + ], + [ + "gene_synonym", + "JW5111" + ], + [ + "gene_synonym", + "NP_415351.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75797" + ], + [ + "gene_synonym", + "b0830" + ], + [ + "gene_synonym", + "gsiB" + ], + [ + "gene_synonym", + "yliB" + ] + ], + "dna_sequence": "ATGGCAAGAGCTGTACACCGTAGTGGGTTAGTGGCGCTGGGCATTGCGACAGCGTTGATGGCATCTTGTGCATTCGCTGCCAAAGATGTGGTGGTGGCGGTAGGATCGAATTTCACCACGCTCGATCCGTATGACGCAAATGACACGTTATCTCAGGCCGTAGCGAAATCGTTTTACCAGGGGCTGTTCGGTCTGGATAAAGAGATGAAACTGAAAAACGTGCTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAGGATGGCACCGATTTCAACGCCGCGGCGGTGAAAGCGAATCTGGACCGGGCCAGCGATCCGGCGAATCATCTTAAACGCTATAACCTGTATAAGAATATTGCTAAAACGGAAGCGATCGATCCGACAACGGTAAAGATTACCCTCAAACAGCCGTTCTCAGCGTTTATTAATATTCTTGCCCATCCGGCGACCGCGATGATTTCACCGGCAGCGCTGGAAAAATATGGCAAGGAGATTGGTTTTTATCCGGTGGGAACCGGACCGTATGAACTGGATACCTGGAATCAGACCGATTTTGTGAAGGTGAAAAAATTCGCGGGTTACTGGCAGCCAGGATTGCCCAAACTGGACAGCATAACCTGGCGTCCGGTGGCGGATAACAACACCCGCGCGGCAATGCTGCAAACCGGTGAAGCGCAGTTTGCTTTCCCCATTCCTTACGAGCAGGCCACACTGCTGGAGAAAAACAAAAATATCGAGTTGATGGCCAGTCCGTCAATTATGCAGCGTTATATCAGTATGAACGTGACGCAAAAGCCGTTCGATAACCCGAAGGTCCGTGAGGCGCTGAATTACGCCATTAACCGTCCGGCGCTGGTGAAAGTTGCCTTTGCGGGCTATGCAACGCCAGCTACTGGTGTGGTACCGCCAAGTATCGCCTACGCGCAAAGTTATAAACCGTGGCCTTACGATCCAGTGAAAGCGCGCGAATTACTGAAAGAGGCGGGATATCCCAACGGTTTCAGTACCACGCTGTGGTCGTCACATAACCACAGCACCGCGCAGAAAGTGCTGCAATTTACCCAGCAGCAGTTAGCGCAGGTCGGGATTAAAGCCCAGGTGACTGCGATGGATGCCGGACAGCGGGCGGCAGAAGTTGAAGGTAAAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCGGCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCACACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAA", + "dna_sequence_length": 1539, + "functions": [ + "glutathione ABC transporter periplasmic binding protein" + ], + "id": "CDS_812", + "location": [ + [ + "NC_000913", + 869411, + "+", + 1539 + ] + ], + "md5": "98574d6028c3baf630881a35d9e99c30", + "parent_gene": "", + "protein_md5": "15e6565cfd76f124386d3ae2744c50dd", + "protein_translation": "MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002834" + ], + [ + "gene_synonym", + "ECK0821" + ], + [ + "gene_synonym", + "EcoGene:EG13474" + ], + [ + "gene_synonym", + "GI:16128799" + ], + [ + "gene_synonym", + "GeneID:945460" + ], + [ + "gene_synonym", + "JW0815" + ], + [ + "gene_synonym", + "NP_415352.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75798" + ], + [ + "gene_synonym", + "b0831" + ], + [ + "gene_synonym", + "gsiC" + ], + [ + "gene_synonym", + "yliC" + ] + ], + "dna_sequence": "ATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCTCGCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTGCTTTACGCCGCCATTAACCCGGCTATCAGGTACAAGTAA", + "dna_sequence_length": 921, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_813", + "location": [ + [ + "NC_000913", + 870967, + "+", + 921 + ] + ], + "md5": "d65f0b0a9a03744b71dcc28ebf60d53d", + "parent_gene": "", + "protein_md5": "c46426c216e7cf06b47dab106a168a78", + "protein_translation": "MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002836" + ], + [ + "gene_synonym", + "ECK0822" + ], + [ + "gene_synonym", + "EcoGene:EG13475" + ], + [ + "gene_synonym", + "GI:16128800" + ], + [ + "gene_synonym", + "GeneID:945461" + ], + [ + "gene_synonym", + "JW0816" + ], + [ + "gene_synonym", + "NP_415353.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75799" + ], + [ + "gene_synonym", + "b0832" + ], + [ + "gene_synonym", + "gsiD" + ], + [ + "gene_synonym", + "yliD" + ] + ], + "dna_sequence": "ATGCGACTATTTAACTGGCGACGTCAGGCGGTGTTAAACGCCATGCCACTGGTCAAACCTGACCAGGTACGTACACCGTGGCATGAATTCTGGCGACGATTTCGCCGTCAGCATATGGCGATGACCGCCGCATTATTCGTTATTTTATTGATTGTGGTGGCCATTTTTGCACGCTGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCGGGACGTTGCTGGGCTTGCTCGCTGGATATTATGAAGGCTGGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCGATTATCTCTGCCGCCAGCCTCTCATTTCTCGGCCTCGGTGCGCAGCCGCCGACACCAGAGTGGGGAGCAATGCTCAATGAGGCTCGAGCGGATATGGTTATCGCGCCGCATGTCGCTGTTTTTCCGGCCCTGGCTATTTTTCTGACCGTACTGGCGTTCAATTTGTTGGGCGATGGTTTACGCGATGCGCTGGATCCGAAAATTAAAGGATAG", + "dna_sequence_length": 912, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_814", + "location": [ + [ + "NC_000913", + 871890, + "+", + 912 + ] + ], + "md5": "dac970ee889cbc3ec52c07cc8361c711", + "parent_gene": "", + "protein_md5": "235a1842601e3ba0e8f9ca8893f2ddbe", + "protein_translation": "MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002839" + ], + [ + "gene_synonym", + "ECK0823" + ], + [ + "gene_synonym", + "EcoGene:EG13476" + ], + [ + "gene_synonym", + "GI:16128801" + ], + [ + "gene_synonym", + "GeneID:945462" + ], + [ + "gene_synonym", + "JW0817" + ], + [ + "gene_synonym", + "NP_415354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75800" + ], + [ + "gene_synonym", + "b0833" + ], + [ + "gene_synonym", + "yliE" + ] + ], + "dna_sequence": "ATGCTGAGTTTATACGAAAAGATAAAGATAAGGCTGATAATTTTATTTTTATTGGCAGCACTGTCATTTATTGGTCTTTTTTTCATCATTAACTATCAACTGGTATCGGAGCGCGCGGTAAAACGTGCCGATAGCCGCTTTGAACTTATTCAGAAAAACGTTGGCTATTTCTTTAAAGATATTGAACGTTCGGCCCTGACATTAAAGGACTCACTGTATTTATTAAAAAATACAGAGGAGATTCAACGCGCCGTGATTCTTAAAATGGAAATGATGCCATTTTTAGACTCGGTGGGACTGGTACTTGATGATAATAAATATTATCTTTTTTCGCGGAGGGCGAATGATAAAATCGTTGTTTATCATCAGGAACAAGTAAATGGACCGCTTGTCGACGAGTCAGGGCGGGTTATTTTTGCCGATTTTAACCCATCGAAACGACCGTGGTCGGTGGCTTCAGATGACTCTAACAACAGCTGGAATCCGGCATACAATTGCTTTGATCGTCCGGGTAAAAAATGTATCTCTTTTACGCTACACATCAACGGCAAAGATCACGATTTGTTAGCGGTGGATAAAATTCATGTCGATTTAAACTGGCGATATCTGAACGAGTATCTTGATCAAATCAGCGCTAATGATGAAGTTCTATTTTTGAAACAAGGCCATGAGATCATTGCCAAGAATCAACTCGCTCGTGAAAAACTGATTATTTATAATAGCGAAGGTAATTATAATATTATTGATTCTGTCGATACTGAATATATCGAAAAAACATCAGCGGTGCCAAACAACGCATTATTCGAAATCTATTTTTATTATCCTGGCGGTAATTTATTGAACGCATCAGATAAACTTTTTTATCTGCCGTTTGCGTTCATTATTATCGTATTGCTGGTGGTTTATTTAATGACCACTCGTGTGTTCCGTCGGCAATTTTCTGAAATGACAGAGCTGGTTAATACGCTGGCGTTTTTGCCTGACTCAACGGATCAAATCGAGGCTCTGAAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCATCAAACTGTGTGGTCTGGAAGCCGTGGAAGCGGTGTTTGGTGTTGATGAGCGCAATAAAATCGTCAGGAAATTGTGTCAGCGAATTGCCGAGAAATATGCGCAATGCTGCGATATCGTGACATTCAATGCCGATCTCTATTTACTTCTGTGTCGGGAAAATGTACAGACATTTACCCGTAAAATAGCGATGGTAAACGATTTTGACAGCAGCTTTGGCTACCGCAATCTGCGCATCCATAAGTCTGCCATTTGTGAACCTTTGCAGGGGGAAAACGCCTGGAGTTACGCAGAAAAACTGAAACTGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATCGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCAGATTATTAAAACGGCAATGGGTGAATTCAGACATTTTAGTCAGCGTGCGTCGCTGAAGGATGATTTCTTACTGCATATTAATGTTTCGCCCTGGCAGTTAAACGAACCACACTTTCATGAGCGTTTTACCACCATCATGAAAGAAAATGGCCTGAAGGCGAACAGCCTCTGTGTTGAGATCACTGAAACCGTGATCGAGCGAATTAATGAACATTTTTATCTCAATATTGAACAACTGCGTAAACAAGGGGTACGGATATCGATTGATGACTTTGGCACCGGTTTGTCAAACCTGAAACGTTTTTATGAAATTAATCCAGACAGCATAAAGGTGGACTCGCAATTCACCGGCGATATTTTCGGTACTGCGGGAAAAATTGTGCGCATTATTTTCGACCTGGCACGCTATAACCGGATCCCGGTGATTGCGGAAGGCGTAGAGAGCGAAGACGTTGCGCGCGAATTAATCAAATTAGGATGTGTTCAGGCTCAGGGGTATCTGTACCAGAAACCCATGCCATTCTCCGCCTGGGATAAAAGTGGAAAATTAGTAAAAGAGTAG", + "dna_sequence_length": 2349, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_815", + "location": [ + [ + "NC_000913", + 872979, + "+", + 2349 + ] + ], + "md5": "00e2c8de7d0fa4f6051c9cf6ae3fd025", + "parent_gene": "", + "protein_md5": "7459e01a0804156fd16dc4fece0d625a", + "protein_translation": "MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE", + "protein_translation_length": 782, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002841" + ], + [ + "gene_synonym", + "ECK0824" + ], + [ + "gene_synonym", + "EcoGene:EG13477" + ], + [ + "gene_synonym", + "GI:16128802" + ], + [ + "gene_synonym", + "GeneID:945463" + ], + [ + "gene_synonym", + "JW0818" + ], + [ + "gene_synonym", + "NP_415355.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75801" + ], + [ + "gene_synonym", + "b0834" + ], + [ + "gene_synonym", + "yliF" + ] + ], + "dna_sequence": "ATGTCCAGAATCAATAAGTTCGTACTTACAGTCAGTCTGCTGATTTTTATCATGATTTCAGCAGTTGCCTGCGGGATCTACACTCAAATGGTAAAGGAACGGGTGTATAGCCTGAAACAGTCCGTTATTGATACTGCTTTTGCGGTGGCAAATATTGCTGAATATCGGCGTAGCGTGGCAATTGATCTTATCAACACGCTAAATCCCACGGAGGAACAGCTGTTGGTTGGTTTGCGCACAGCTTACGCCGACTCGGTTTCCCCCTCTTATTTGTACGATGTCGGTCCTTATCTGATTTCCAGTGACGAATGTATTCAGGTAAAGGAGTTCGAGAAAAATTATTGTGCAGATATTATGCAGGTTGTGAAGTATCGACATGTCAAAAATACAGGGTTTATCTCTTTTGACGGTAAAACCTTCGTCTATTACCTCTATCCGGTAACTCACAATCGTAGTCTGATATTTTTGCTTGGTCTGGAGCGTTTTTCTTTACTGTCAAAATCGCTGGCGATGGACAGCGAGAACCTGATGTTCTCTCTATTTAAGAACGGTAAACCGGTGACCGGTGATGAATATAATGCTAAAAACGCCATCTTCACCGTTTCGGAAGCGATGGAGCACTTCGCCTATTTGCCGACCGGATTGTATGTATTTGCGTATAAAAAAGATGTTTATTTGCGGGTTTGTACATTGATTATTTTCTTTGCCGCATTGGTGGCAGTGATATCGGGTGCCAGTTGCCTCTATCTGGTACGCAGAGTGATTAATCGTGGTATTGTGGAGAAAGAAGCCATCATTAATAACCATTTTGAACGCGTACTGGATGGCGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGAAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGATAAAGGTAAAGTCTACCGCTTCGGCGGTGACGAATTTGCGGTGATTTATACGGGTGGAACGCTGGAAGAGTTGCTATCGATTCTAAAAGAAATCGTTCATTTCCAGGTGGGAAGCATTAATTTAAGTACCAGTATCGGTGTAGCACATTCAAATGAATGTCCTACCGTCGAACGCTTGAAAATGCTGGCGGATGAGCGGCTGTATAAGAGTAAGAAAAACGGCAGGGCACAGATTAGCTGGCAGTAA", + "dna_sequence_length": 1329, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_816", + "location": [ + [ + "NC_000913", + 875335, + "+", + 1329 + ] + ], + "md5": "1678de1371181b06d3a1cef85b5cb3d9", + "parent_gene": "", + "protein_md5": "c22a1e1d023a0a7d9536fa4b6191c089", + "protein_translation": "MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECPTVERLKMLADERLYKSKKNGRAQISWQ", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002843" + ], + [ + "gene_synonym", + "ECK0825" + ], + [ + "gene_synonym", + "EcoGene:EG13478" + ], + [ + "gene_synonym", + "GI:16128803" + ], + [ + "gene_synonym", + "GeneID:945465" + ], + [ + "gene_synonym", + "JW0819" + ], + [ + "gene_synonym", + "NP_415356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEI4" + ], + [ + "gene_synonym", + "b0835" + ], + [ + "gene_synonym", + "rimO" + ], + [ + "gene_synonym", + "yliG" + ] + ], + "dna_sequence": "ATGAGCAAAGTAACTCCCCAGCCGAAAATCGGCTTTGTTTCCCTTGGCTGTCCGAAAAACCTTGTTGATTCAGAGCGTATTCTCACCGAACTCCGCACTGAAGGTTATGACGTGGTACCGAGCTATGACGATGCGGACATGGTGATCGTCAACACCTGCGGCTTTATTGACAGCGCGGTACAAGAATCACTGGAAGCCATTGGTGAAGCGTTGAATGAAAACGGCAAGGTTATTGTGACCGGTTGTCTGGGGGCAAAAGAAGATCAGATCCGCGAAGTCCACCCGAAAGTGCTGGAAATCACCGGGCCTCATAGCTATGAGCAGGTTCTGGAGCACGTTCATCACTACGTGCCAAAACCGAAACACAACCCATTCCTGAGCCTGGTGCCAGAACAAGGTGTGAAACTGACGCCGCGTCATTATGCCTATCTGAAAATTTCTGAAGGCTGTAATCACCGCTGCACCTTCTGCATTATTCCGTCTATGCGCGGCGACCTGGTGAGCCGTCCGATTGGCGAAGTGTTAAGTGAAGCGAAACGTCTGGTAGATGCGGGCGTTAAAGAGATTCTGGTGATCTCGCAGGATACTTCCGCCTATGGCGTTGATGTTAAACATCGTACTGGCTTCCACAACGGCGAGCCGGTAAAAACCAGCATGGTCAGCCTGTGCGAACAGTTATCGAAACTGGGGATCTGGACACGTCTGCACTACGTTTACCCTTATCCGCATGTGGACGACGTCATCCCACTGATGGCAGAAGGCAAAATCCTGCCGTATCTGGACATTCCGTTGCAGCACGCCAGCCCGCGCATTCTCAAACTGATGAAGCGTCCGGGTTCTGTAGATCGCCAACTGGCGCGCATCAAACAGTGGCGCGAAATCTGCCCGGAACTGACCCTACGCTCAACCTTTATTGTCGGCTTCCCTGGCGAGACAGAAGAAGATTTCCAGATGCTACTCGACTTCCTGAAAGAAGCGCGTCTGGATCGCGTTGGCTGCTTTAAATACAGCCCGGTTGAAGGTGCAGACGCCAATGCCCTGCCTGACCAGGTTCCGGAAGAAGTTAAAGAAGAACGCTGGAACCGTTTCATGCAGCTGCAGCAGCAGATTTCCGCCGAGCGCCTGCAAGAGAAAGTGGGCCGTGAAATTCTGGTGATTATCGACGAAGTGGACGAAGAAGGCGCGATTGGTCGCAGCATGGCAGATGCACCGGAAATCGACGGCGCGGTTTATCTCAATGGTGAAACCAACGTTAAGCCGGGTGATATCCTGCGTGTGAAAGTCGAGCACGCCGATGAGTACGATTTGTGGGGTAGCCGGGTTTAA", + "dna_sequence_length": 1326, + "functions": [ + "ribosomal protein S12 methylthiotransferase" + ], + "id": "CDS_817", + "location": [ + [ + "NC_000913", + 878035, + "-", + 1326 + ] + ], + "md5": "39ebfd8c5c33f8211338b5e318038cbc", + "parent_gene": "", + "protein_md5": "9233817a6d266fb0b40e090f3f4497d6", + "protein_translation": "MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV", + "protein_translation_length": 441, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002849" + ], + [ + "gene_synonym", + "ECK0826" + ], + [ + "gene_synonym", + "EcoGene:EG13479" + ], + [ + "gene_synonym", + "GI:16128804" + ], + [ + "gene_synonym", + "GeneID:945466" + ], + [ + "gene_synonym", + "JW0820" + ], + [ + "gene_synonym", + "NP_415357.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAY1" + ], + [ + "gene_synonym", + "b0836" + ], + [ + "gene_synonym", + "bssR" + ], + [ + "gene_synonym", + "yliH" + ] + ], + "dna_sequence": "ATGTTCGTTGACAGACAGCGAATCGATCTGCTGAACCGGTTGATCGACGCACGCGTTGACCTCGCCGCATACGTGCAACTGAGGAAGGCAAAAGGATACATGTCCGTCAGCGAAAGCAATCATCTACGAGATAACTTTTTTAAACTGAATCGCGAACTGCACGATAAATCGCTGCGGTTGAATCTTCATCTGGATCAGGAAGAGTGGAGTGCTCTTCATCATGCTGAAGAAGCATTAGCGACAGCCGCAGTATGTTTGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGA", + "dna_sequence_length": 384, + "functions": [ + "repressor of biofilm formation by indole transport regulation" + ], + "id": "CDS_818", + "location": [ + [ + "NC_000913", + 878248, + "+", + 384 + ] + ], + "md5": "14c287694d8fa34cf518bce70737aa01", + "parent_gene": "", + "protein_md5": "9dbf9ce8120b14c0c53088d087bd7f43", + "protein_translation": "MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQKHAMLEKA", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002852" + ], + [ + "gene_synonym", + "ECK0827" + ], + [ + "gene_synonym", + "EcoGene:EG13480" + ], + [ + "gene_synonym", + "GI:16128805" + ], + [ + "gene_synonym", + "GeneID:945467" + ], + [ + "gene_synonym", + "JW0821" + ], + [ + "gene_synonym", + "NP_415358.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75804" + ], + [ + "gene_synonym", + "b0837" + ], + [ + "gene_synonym", + "yliI" + ] + ], + "dna_sequence": "ATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTGCGTCACTGGCAAGCAGGAAAAGGATTATCTGCGCCGCTTTCCGGAGTTCCGGACGTTTGGGCGCACGGGCAGGGCGGCCTGCTGGACGTGGTTTTAGCGCCTGATTTTGCTCAGTCTCGCCGCATCTGGTTAAGTTATTCCGAAGTTGGCGATGATGGCAAAGCCGGAACTGCTGTGGGTTATGGCCGCTTAAGTGATGATCTCTCAAAAGTGACCGACTTCCGCACCGTCTTTCGCCAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCGCCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGAATCCGGTGCGCGCGCCGAGATCTGGTCTTATGGCATTCGTAATCCGCAAGGAATGGCGATGAATCCGTGGAGTAATGCACTGTGGCTGAATGAACATGGCCCGCGCGGTGGTGATGAAATTAATATCCCGCAAAAAGGCAAAAACTACGGCTGGCCGCTGGCAACCTGGGGAATCAACTATTCAGGCTTTAAGATACCGGAAGCGAAAGGGGAGATCGTCGCCGGGACCGAGCAACCTGTTTTTTACTGGAAAGATTCGCCCGCTGTGAGCGGCATGGCCTTCTATAACAGCGATAAATTCCCCCAGTGGCAGCAAAAATTATTTATTGGCGCGCTGAAAGATAAAGATGTCATTGTGATGAGCGTCAACGGCGACAAAGTGACAGAAGATGGCCGTATTTTAACGGACAGAGGGCAGCGAATTCGTGATGTTCGCACTGGACCCGACGGTTATTTATACGTTCTCACCGACGAGTCCAGTGGGGAATTACTTAAAGTTAGCCCACGCAATTAG", + "dna_sequence_length": 1116, + "functions": [ + "soluble aldose sugar dehydrogenase" + ], + "id": "CDS_819", + "location": [ + [ + "NC_000913", + 878742, + "+", + 1116 + ] + ], + "md5": "b66591561140f68cb19c0abd86555055", + "parent_gene": "", + "protein_md5": "f7aaab4cd298ad419f65f6dfd595d619", + "protein_translation": "MHRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSPRN", + "protein_translation_length": 371, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002855" + ], + [ + "gene_synonym", + "ECK0828" + ], + [ + "gene_synonym", + "EcoGene:EG13481" + ], + [ + "gene_synonym", + "GI:90111175" + ], + [ + "gene_synonym", + "GeneID:945469" + ], + [ + "gene_synonym", + "JW0822" + ], + [ + "gene_synonym", + "NP_415359.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACA7" + ], + [ + "gene_synonym", + "b0838" + ], + [ + "gene_synonym", + "gstB" + ], + [ + "gene_synonym", + "yliJ" + ] + ], + "dna_sequence": "ATGATTACGCTGTGGGGTCGGAATAATTCAACTAACGTAAAAAAAGTATTGCTGACGCTCGAAGAACTGGAACTACCTTATGAGCAAATTCTCGCGGGCCGTGAGTTTGGGATAAATCACGATGCTGATTTTCTGGCGATGAACCCTAACGGGCTGGTGCCGTTGTTGCGTGACGACGAAAGTGATCTCATTCTTTGGGAATCAAACGCCATTGTCCGCTATCTGGCGGCACAGTACGGGCAAAAACGCCTGTGGATCGACTCACCGGCACGTCGTGCGGAAGCGGAAAAATGGATGGACTGGGCAAACCAGACGCTCAGTAATGCTCATCGCGGGATCCTGATGGGATTAGTCAGAACACCACCGGAAGAGCGCGATCAGGCCGCCATTGATGCCAGTTGCAAAGAGTGCGACGCCCTGTTTGCCCTGCTCGATGCGGAACTGGCAAAAGTAAAATGGTTCTCTGGCGACGAGTTTGGTGTGGGCGATATCGCTATCGCACCGTTCATCTACAATTTGTTTAACGTTGGCCTGACCTGGACACCGCGTCCAAATCTGCAACGCTGGTATCAGCAACTCACTGAACGCCCCGCAGTGCGCAAAGTGGTGATGATTCCCGTTAGCTAA", + "dna_sequence_length": 627, + "functions": [ + "glutathione S-transferase" + ], + "id": "CDS_820", + "location": [ + [ + "NC_000913", + 880480, + "-", + 627 + ] + ], + "md5": "9f9a3e4f0b4902697e5b1096251ae4f8", + "parent_gene": "", + "protein_md5": "06492c649ddc5b0e81a734de36500f67", + "protein_translation": "MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002860" + ], + [ + "gene_synonym", + "ECK0829" + ], + [ + "gene_synonym", + "EcoGene:EG10203" + ], + [ + "gene_synonym", + "GI:16128807" + ], + [ + "gene_synonym", + "GeneID:945455" + ], + [ + "gene_synonym", + "JW0823" + ], + [ + "gene_synonym", + "NP_415360.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08506" + ], + [ + "gene_synonym", + "b0839" + ], + [ + "gene_synonym", + "dacC" + ] + ], + "dna_sequence": "ATGACGCAATACTCCTCTCTCCTTCGTGGTCTTGCAGCGGGTTCTGCATTTTTATTCCTTTTTGCCCCAACGGCATTCGCGGCGGAACAAACCGTTGAAGCGCCGAGCGTGGATGCGCGTGCATGGATTTTAATGGATTACGCCAGCGGTAAAGTGCTGGCAGAAGGCAATGCGGATGAGAAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTGGTTCATCGGTAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCTGAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATTAAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGCAGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCAGCTTACCGCACCGCTGAAAAAAGGTCAGGTTGTCGGGACCATTGATTTCCAGCTTAACGGTAAATCCATTGAGCAGCGTCCGCTGATCGTGATGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAA", + "dna_sequence_length": 1203, + "functions": [ + "D-alanyl-D-alanine carboxypeptidase", + "penicillin-binding protein 6a" + ], + "id": "CDS_821", + "location": [ + [ + "NC_000913", + 880727, + "+", + 1203 + ] + ], + "md5": "ef60ffd610343d1d07ab02dd7c3879cc", + "parent_gene": "", + "protein_md5": "067b145a4e68e748e7ae38bdd7fa3de2", + "protein_translation": "MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRVWDFVMMKFHQWFGSWFS", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002862" + ], + [ + "gene_synonym", + "ECK0830" + ], + [ + "gene_synonym", + "EcoGene:EG10223" + ], + [ + "gene_synonym", + "GI:16128808" + ], + [ + "gene_synonym", + "GeneID:945453" + ], + [ + "gene_synonym", + "JW0824" + ], + [ + "gene_synonym", + "NP_415361.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACK5" + ], + [ + "gene_synonym", + "b0840" + ], + [ + "gene_synonym", + "deoR" + ], + [ + "gene_synonym", + "nucR" + ] + ], + "dna_sequence": "ATGGAAACACGTCGCGAAGAGCGTATCGGGCAGCTGCTGCAAGAATTAAAACGCAGCGATAAGTTACATCTTAAAGACGCCGCCGCCCTGCTTGGGGTTTCGGAGATGACGATTCGTCGCGATCTGAACAACCACAGTGCGCCCGTCGTTTTGCTCGGCGGCTATATTGTTCTGGAACCGCGCAGTGCCAGCCATTACCTGTTAAGCGATCAAAAATCCCGCCTGGTGGAAGAAAAACGCCGGGCGGCAAAACTGGCTGCGACGCTGGTAGAACCCGATCAGACCCTCTTTTTTGACTGTGGCACCACCACGCCGTGGATTATTGAAGCGATTGATAATGAAATCCCTTTTACCGCCGTTTGTTATTCGCTAAATACCTTTCTGGCGCTGAAAGAGAAACCCCATTGCCGCGCGTTTCTTTGCGGTGGTGAATTTCACGCCAGCAACGCCATTTTCAAACCCATCGATTTTCAGCAAACGCTGAATAATTTTTGCCCGGATATCGCTTTTTATTCTGCGGCGGGCGTGCATGTCAGTAAAGGCGCTACCTGTTTTAATCTTGAAGAGTTGCCGGTAAAACACTGGGCCATGTCGATGGCGCAAAAGCATGTGCTGGTTGTCGACCACAGTAAATTTGGCAAGGTGCGTCCGGCGCGCATGGGTGACCTGAAACGCTTTGATATTGTGGTGAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAA", + "dna_sequence_length": 759, + "functions": [ + "deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor", + "repressor of nupG and tsx" + ], + "id": "CDS_822", + "location": [ + [ + "NC_000913", + 882734, + "-", + 759 + ] + ], + "md5": "110e05f6771404759ee78a143e059d48", + "parent_gene": "", + "protein_md5": "8ee9773f9e113ce236aaaf69eec21e0d", + "protein_translation": "METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002865" + ], + [ + "gene_synonym", + "ECK0831" + ], + [ + "gene_synonym", + "EcoGene:EG13676" + ], + [ + "gene_synonym", + "GI:16128809" + ], + [ + "gene_synonym", + "GeneID:945450" + ], + [ + "gene_synonym", + "JW5112" + ], + [ + "gene_synonym", + "NP_415362.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75806" + ], + [ + "gene_synonym", + "b0841" + ], + [ + "gene_synonym", + "bcrC" + ], + [ + "gene_synonym", + "ybjG" + ] + ], + "dna_sequence": "ATGCTGGAAAATTTGAATCTCTCTCTATTCTCTCTTATTAACGCGACGCCAGACTCGGCTCCGTGGATGATCTCGTTGGCGATTTTTATTGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCGTGGTACTTTGGTTGTGGGGGCTTACAGCACAACGGCAACTGGTGATAAAAATCGCTATCGCGCTGGCGGTCAGCCTGTTTGTGTCCTGGACGATGGGACATCTTTTTCCGCACGACCGACCCTTTGTCGAAAATATCGGCTATAACTTCCTGCATCATGCGGCGGATGACTCATTCCCAAGCGATCACGGTACGGTGATTTTCACCTTTGCACTGGCATTTTTATGCTGGCATCGCCTGTGGTCCGGCTCACTTTTAATGGTGCTGGCCGTCGTCATTGCCTGGTCGCGCGTTTATCTTGGCGTCCACTGGCCGCTGGATATGCTCGGTGGATTGCTGGCAGGTATGATTGGCTGCCTTAGTGCCCAGATTATCTGGCAAGCGATGGGGCATAAACTCTATCAACGTCTGCAATCGTGGTATCGCGTCTGTTTTGCATTACCGATCCGCAAAGGCTGGGTGCGTGACTGA", + "dna_sequence_length": 597, + "functions": [ + "undecaprenyl pyrophosphate phosphatase" + ], + "id": "CDS_823", + "location": [ + [ + "NC_000913", + 883388, + "-", + 597 + ] + ], + "md5": "7f66fce12955d771323d3385727d93c1", + "parent_gene": "", + "protein_md5": "d94d303f349fd6b56cbd2781dd092aa5", + "protein_translation": "MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002871" + ], + [ + "gene_synonym", + "ECK0832" + ], + [ + "gene_synonym", + "EcoGene:EG13696" + ], + [ + "gene_synonym", + "GI:16128810" + ], + [ + "gene_synonym", + "GeneID:945448" + ], + [ + "gene_synonym", + "JW0826" + ], + [ + "gene_synonym", + "NP_415363.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEY8" + ], + [ + "gene_synonym", + "b0842" + ], + [ + "gene_synonym", + "cmlA" + ], + [ + "gene_synonym", + "cmr" + ], + [ + "gene_synonym", + "mdfA" + ] + ], + "dna_sequence": "ATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACTTCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGCTGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGACCTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCTGCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGTGCGATTAACCCTGTTTGCCAGCGATATGAGTAAAGGTACGGTTTCTGCCGCGATGGGAATGCTGCAAATGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACTGTTTAATCTCTTCAACCTTGTCAACGGAATTTTGTGGCTGTCGCTGATGGTTATCTTTTTAAAAGATAAACAGATGGGAAATTCTCACGAAGGGTAA", + "dna_sequence_length": 1233, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_824", + "location": [ + [ + "NC_000913", + 883673, + "+", + 1233 + ] + ], + "md5": "80e04f18448a7ab4ec54a835abc1aa09", + "parent_gene": "", + "protein_md5": "f19ce7832e4c8c77dac3364c7b25a5d4", + "protein_translation": "MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIVTCLAILLAQNIEQFTLLRFLQGISLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAALAAISFFGLQRAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLKDKQMGNSHEG", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002873" + ], + [ + "gene_synonym", + "ECK0833" + ], + [ + "gene_synonym", + "EcoGene:EG13677" + ], + [ + "gene_synonym", + "GI:16128811" + ], + [ + "gene_synonym", + "GeneID:945447" + ], + [ + "gene_synonym", + "JW0827" + ], + [ + "gene_synonym", + "NP_415364.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAY4" + ], + [ + "gene_synonym", + "b0843" + ], + [ + "gene_synonym", + "ybjH" + ] + ], + "dna_sequence": "ATGATTATGAAAAATTGTCTACTGTTGGGCGCGCTTTTAATGGGCTTTACTGGTGTGGCGATGGCGCAAAGTGTCACCGTCGATGTGCCGAGTGGATACAAAGTGGTTGTGGTTCCTGATTCAGTCAGCGTTCCACAAGCGGTCAGCGTCGCGACTGTGCCGCAAACCGTCTATGTGGCTCCTGCGCCAGCTCCGGCTTACCGCCCGCATCCTTATGTTCGCCATCTTGCCAGCGTAGGTGAAGGGATGGTTATCGAACACCAGATTGACGACCATCACCATTAA", + "dna_sequence_length": 285, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_825", + "location": [ + [ + "NC_000913", + 885230, + "-", + 285 + ] + ], + "md5": "90f114c6d784a661e30626f4bfbcca9f", + "parent_gene": "", + "protein_md5": "710dc7667432efcbee50c4dcd77dc506", + "protein_translation": "MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002877" + ], + [ + "gene_synonym", + "ECK0834" + ], + [ + "gene_synonym", + "EcoGene:EG13678" + ], + [ + "gene_synonym", + "GI:90111176" + ], + [ + "gene_synonym", + "GeneID:945470" + ], + [ + "gene_synonym", + "JW5113" + ], + [ + "gene_synonym", + "NP_415365.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75809" + ], + [ + "gene_synonym", + "b0844" + ], + [ + "gene_synonym", + "ybjI" + ] + ], + "dna_sequence": "ATGAGCATTAAATTAATTGCGGTAGACATGGATGGTACTTTCTTAAGCGATCAAAAAACCTATAACCGTGAGCGGTTTATGGCTCAGTATCAGCAAATGAAAGCACAAGGAATTCGCTTTGTAGTCGCCAGCGGGAATCAATATTATCAGTTGATCTCTTTCTTCCCTGAAATTGCTAATGAAATTGCCTTTGTGGCTGAAAACGGCGGCTGGGTAGTGAGCGAAGGCAAAGATGTTTTTAATGGCGAGCTATCGAAGGATGCGTTTGCTACTGTCGTGGAACATTTGCTGACGCGCCCGGAAGTGGAAATTATTGCCTGCGGAAAAAATAGTGCCTATACACTCAAAAAATATGACGATGCCATGAAAACGGTGGCGGAAATGTATTATCACCGTCTGGAATACGTCGATAACTTTGACAACTTAGAGGATATCTTCTTTAAGTTTGGCCTGAATCTTTCCGATGAACTGATTCCACAAGTACAAAAAGCATTACATGAGGCCATCGGCGATATTATGGTGTCGGTCCACACCGGCAACGGCAGCATCGATCTGATTATCCCCGGCGTACATAAAGCCAATGGCCTTCGCCAACTGCAGAAATTATGGGGAATAGACGACAGCGAAGTGGTGGTCTTTGGCGATGGCGGTAACGATATTGAGATGCTGCGTCAGGCAGGCTTTAGTTTTGCAATGGAAAATGCCGGTAGCGCGGTCGTCGCAGCGGCAAAATACCGCGCAGGCTCCAATAACCGTGAAGGCGTACTGGATGTGATCGATAAAGTTCTTAAACACGAAGCGCCATTTGACCAATAA", + "dna_sequence_length": 816, + "functions": [ + "5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase", + "pyrimidine phosphatase", + "riboflavin synthesis" + ], + "id": "CDS_826", + "location": [ + [ + "NC_000913", + 886131, + "-", + 816 + ] + ], + "md5": "63b958c9ecaab589979df92142f2606b", + "parent_gene": "", + "protein_md5": "76fd2bc51850ae4283c3cfa8d3828d41", + "protein_translation": "MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002880" + ], + [ + "gene_synonym", + "ECK0835" + ], + [ + "gene_synonym", + "EcoGene:EG13679" + ], + [ + "gene_synonym", + "GI:16128813" + ], + [ + "gene_synonym", + "GeneID:945471" + ], + [ + "gene_synonym", + "JW0829" + ], + [ + "gene_synonym", + "NP_415366.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75810" + ], + [ + "gene_synonym", + "b0845" + ], + [ + "gene_synonym", + "ybjJ" + ] + ], + "dna_sequence": "ATGACCGTAAATTCTTCACGTAATGCATTGAAACGCCGAACCTGGGCGCTGTTTATGTTCTTCTTTTTGCCAGGCCTGTTAATGGCGTCCTGGGCAACCCGTACGCCTGCTATCCGCGATATTCTCTCTGTCTCGATCGCTGAAATGGGCGGTGTTCTCTTTGGTCTGTCGATCGGTTCGATGAGCGGTATTCTCTGCTCGGCGTGGTTAGTGAAACGCTTTGGGACACGTAATGTCATCCTGGTCACGATGTCCTGCGCATTGATCGGGATGATGATATTAAGTCTGGCACTCTGGCTGACATCGCCCCTGCTCTTTGCCGTTGGTCTCGGCGTCTTTGGGGCAAGTTTTGGTTCTGCGGAAGTGGCGATAAACGTTGAAGGTGCTGCCGTTGAGCGAGAAATGAATAAGACGGTTTTGCCGATGATGCACGGTTTTTATAGCCTGGGCACGCTGGCAGGCGCAGGTGTCGGGATGGCACTGACGGCCTTTGGCGTTCCGGCAACGGTGCACATTTTATTGGCGGCGCTGGTAGGTATCGCACCTATTTATATCGCCATTCAGGCAATCCCTGACGGTACGGGCAAAAATGCTGCCGATGGCACCCAGCATGGCGAAAAAGGCGTACCTTTTTATCGCGATATCCAGTTGCTGCTGATAGGTGTTGTGGTGCTGGCGATGGCCTTTGCCGAAGGTTCTGCCAACGACTGGTTACCCTTATTAATGGTTGACGGTCACGGTTTTAGCCCTACTTCCGGCTCGCTGATTTATGCCGGTTTTACCCTGGGGATGACCGTTGGACGCTTCACCGGCGGTTGGTTCATCGACCGTTACAGTCGCGTTGCCGTGGTTCGGGCCAGTGCACTAATGGGGGCGTTGGGTATTGGGCTGATTATTTTTGTCGATAGCGCCTGGGTCGCTGGGGTGTCTGTTGTACTCTGGGGACTGGGTGCCTCGCTGGGCTTCCCGCTGACCATTTCTGCCGCCAGCGATACCGGCCCCGATGCACCAACCCGCGTCAGTGTGGTAGCAACGACCGGTTATCTGGCTTTCCTCGTCGGGCCGCCGCTGCTGGGCTATCTCGGCGAACATTATGGATTACGTAGTGCAATGCTGGTTGTACTGGCGCTGGTTATTCTCGCGGCTATTGTCGCGAAAGCCGTCGCCAAACCCGATACCAAAACGCAGACGGCGATGGAGAATAGTTGA", + "dna_sequence_length": 1209, + "functions": [ + "putative drug efflux MFS transporter, inner membrane protein" + ], + "id": "CDS_827", + "location": [ + [ + "NC_000913", + 887339, + "-", + 1209 + ] + ], + "md5": "d4f88f3bb75dc64f62e5d8aa1a68952d", + "parent_gene": "", + "protein_md5": "64e55c42078d0d56bb520381025f1f4c", + "protein_translation": "MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSVSIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTSPLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMALTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGVPFYRDIQLLLIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGPDAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPDTKTQTAMENS", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002885" + ], + [ + "gene_synonym", + "ECK0836" + ], + [ + "gene_synonym", + "EcoGene:EG13680" + ], + [ + "gene_synonym", + "GI:16128814" + ], + [ + "gene_synonym", + "GeneID:945473" + ], + [ + "gene_synonym", + "JW5114" + ], + [ + "gene_synonym", + "NP_415367.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75811" + ], + [ + "gene_synonym", + "b0846" + ], + [ + "gene_synonym", + "rcdA" + ], + [ + "gene_synonym", + "rcdR" + ], + [ + "gene_synonym", + "ybjK" + ] + ], + "dna_sequence": "ATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAACTTTACGGAATACATGCTGTTACGCACCGCAAAATTGCTACCCTTGCCGGGGTACCGTTGGGATCGATGACCTACTATTTTTCAGGAATTGATGAGTTGTTACTGGAGGCGTTCAGCAGTTTTACTGAGATCATGTCCCGGCAATATCAGGCATTTTTTAGCGATGTTAGTGATGCTCCGGGCGCATGCCAGGCTATCACCGATATGATCTACAGCTCACAGGTTGCAACGCCGGATAACATGGAGCTGATGTACCAGCTCTACGCGCTGGCTAGCCGAAAACCGCTATTAAAAACGGTAATGCAAAACTGGATGCAGCGCAGTCAGCAAACGCTCGAACAATGGTTTGAACCCGGAACCGCCCGCGCGCTTGATGCGTTTATTGAGGGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAG", + "dna_sequence_length": 537, + "functions": [ + "transcriptional regulator of csgD and ybiJI", + "autoregulator" + ], + "id": "CDS_828", + "location": [ + [ + "NC_000913", + 887423, + "+", + 537 + ] + ], + "md5": "8cecfbe1bcddd61e67aebfd7cf4ad7ab", + "parent_gene": "", + "protein_md5": "65646c01bd712f5483197e9bb4866a7b", + "protein_translation": "MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002887" + ], + [ + "gene_synonym", + "ECK0838" + ], + [ + "gene_synonym", + "EcoGene:EG13681" + ], + [ + "gene_synonym", + "GI:16128815" + ], + [ + "gene_synonym", + "GeneID:945474" + ], + [ + "gene_synonym", + "JW0831" + ], + [ + "gene_synonym", + "NP_415368.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60869" + ], + [ + "gene_synonym", + "b0847" + ], + [ + "gene_synonym", + "ybjL" + ] + ], + "dna_sequence": "GTGAATATAAACGTCGCCGAATTGTTAAATGGGAATTACATTCTGTTATTATTTGTGGTCCTCGCGCTTGGGCTATGTCTCGGAAAGTTACGACTTGGTTCGATCCAACTGGGTAATTCCATTGGCGTTTTAGTCGTATCGCTGTTATTAGGCCAACAACATTTCAGCATTAACACCGATGCGCTTAATCTTGGCTTTATGCTGTTTATTTTCTGCGTCGGGGTCGAAGCCGGACCGAACTTTTTTTCCATTTTTTTTCGCGATGGGAAAAATTACCTAATGTTAGCACTGGTGATGGTTGGCAGTGCGCTGGTGATCGCCTTAGGGTTAGGTAAGCTGTTTGGCTGGGATATTGGCCTGACGGCCGGTATGTTAGCAGGCTCTATGACGTCGACACCGGTTCTGGTCGGTGCTGGCGATACACTGCGTCATTCCGGCATGGAAAGCAGGCAGCTCTCACTGGCACTGGATAATCTGAGCCTCGGGTATGCCTTAACCTATTTAATCGGTCTGGTGAGTTTGATTGTTGGTGCGCGTTACTTGCCGAAATTGCAGCATCAGGACTTACAGACCAGCGCCCAGCAAATCGCCCGCGAACGTGGCCTGGACACTGATGCCAACCGTAAGGTTTATTTACCGGTGATCCGCGCCTATCGCGTCGGCCCGGAACTGGTGGCCTGGACCGACGGCAAAAATCTGCGTGAACTGGGTATTTATCGACAAACCGGCTGCTACATTGAACGTATTCGACGTAACGGGATTCTGGCAAATCCAGACGGTGATGCCGTGCTACAAATGGGCGATGAAATAGCGTTGGTAGGCTATCCCGACGCCCATGCCCGACTCGATCCCAGCTTCCGTAACGGTAAAGAAGTTTTCGATCGTGACCTTCTCGACATGCGTATCGTCACTGAAGAAGTGGTCGTTAAAAACCATAACGCTGTAGGTAAACGTCTCGCACAACTGAAGTTGACCGATCACGGTTGCTTCCTTAACCGCGTCATTCGTAGCCAGATTGAGATGCCGATAGATGACAACGTCGTGCTTAACAAAGGTGACGTTTTACAAGTCAGCGGCGATGCCCGCCGCGTAAAAACCATCGCCGATCGCATCGGCTTTATCTCGATTCACAGCCAGGTCACTGACCTGCTGGCATTCTGCGCCTTCTTTGTTATTGGGCTGATGATCGGGATGATCACCTTCCAGTTCAGCACATTCAGTTTCGGCATGGGGAACGCTGCCGGGTTGTTATTCGCCGGAATTATGCTGGGCTTTATGCGTGCTAACCACCCGACCTTCGGTTACATTCCGCAGGGTGCATTAAGCATGGTGAAAGAGTTCGGCTTGATGGTGTTTATGGCAGGCGTTGGTCTGAGCGCCGGTAGCGGTATTAATAACGGCCTGGGCGCGATTGGCGGTCAGATGTTGATTGCCGGATTGATTGTCAGTCTGGTGCCCGTGGTTATCTGTTTCTTGTTCGGTGCTTATGTATTGCGAATGAACCGCGCGCTGTTGTTCGGCGCAATGATGGGCGCACGTACCTGCGCGCCGGCAATGGAGATCATCAGTGATACAGCTCGCAGTAACATCCCGGCGCTGGGCTATGCGGGCACCTATGCAATCGCCAACGTCCTGCTGACGCTGGCAGGGACAATCATCGTCATGGTATGGCCAGGATTAGGATAA", + "dna_sequence_length": 1686, + "functions": [ + "putative transporter" + ], + "id": "CDS_829", + "location": [ + [ + "NC_000913", + 889819, + "-", + 1686 + ] + ], + "md5": "52161b3e82aa520cd367a68146e372f1", + "parent_gene": "", + "protein_md5": "7532e912a715395d12bb25507028600e", + "protein_translation": "MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLSLGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG", + "protein_translation_length": 561, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002891" + ], + [ + "gene_synonym", + "ECK0839" + ], + [ + "gene_synonym", + "EcoGene:EG13682" + ], + [ + "gene_synonym", + "GI:16128816" + ], + [ + "gene_synonym", + "GeneID:945477" + ], + [ + "gene_synonym", + "JW0832" + ], + [ + "gene_synonym", + "NP_415369.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64439" + ], + [ + "gene_synonym", + "b0848" + ], + [ + "gene_synonym", + "ybjM" + ] + ], + "dna_sequence": "GTGAAACATAAACAACGTTGGGCGGGGGCAATCTGCTGTTTTGTCCTCTTCATTGTGGTGTGCCTTTTTCTGGCGACGCACATGAAAGGCGCTTTTCGGGCTGCCGGGCATCCTGAAATCGGCTTGCTATTTTTCATTCTTCCTGGAGCAGTCGCCAGCTTCTTTTCACAGCGTAGAGAAGTCCTGAAACCTCTGTTTGGCGCAATGCTGGCGGCACCCTGTTCGATGCTCATTATGCGGCTGTTTTTTTCACCGACGCGCTCATTCTGGCAAGAGCTGGCATGGTTACTAAGCGCGGTGTTCTGGTGTGCGCTGGGGGCACTGTGTTTCTTATTTATCAGTAGTTTGTTTAAACCACAGCACAGAAAAAATCAGTAA", + "dna_sequence_length": 378, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_830", + "location": [ + [ + "NC_000913", + 890089, + "+", + 378 + ] + ], + "md5": "a97f6298c766cadbd421070522ae4735", + "parent_gene": "", + "protein_md5": "ee21883bafe1692f3d9e922bf7d90f3e", + "protein_translation": "MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002893" + ], + [ + "gene_synonym", + "ECK0840" + ], + [ + "gene_synonym", + "EcoGene:EG10417" + ], + [ + "gene_synonym", + "GI:16128817" + ], + [ + "gene_synonym", + "GeneID:945479" + ], + [ + "gene_synonym", + "JW0833" + ], + [ + "gene_synonym", + "NP_415370.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68688" + ], + [ + "gene_synonym", + "b0849" + ], + [ + "gene_synonym", + "grx" + ], + [ + "gene_synonym", + "grxA" + ] + ], + "dna_sequence": "ATGCAAACCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATTGAGCAATGAACGCGATGATTTTCAGTATCAGTATGTAGATATTCGTGCGGAAGGGATCACTAAAGAAGATCTACAACAAAAGGCAGGTAAACCCGTAGAAACCGTGCCGCAGATTTTTGTCGATCAGCAACATATCGGCGGCTATACCGATTTTGCTGCATGGGTGAAAGAAAATCTGGACGCCTGA", + "dna_sequence_length": 258, + "functions": [ + "glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)" + ], + "id": "CDS_831", + "location": [ + [ + "NC_000913", + 890753, + "-", + 258 + ] + ], + "md5": "b0b944879e4137d17bab71e43a0a03a0", + "parent_gene": "", + "protein_md5": "ae2b2a4fa755d5685227f4a885f51a20", + "protein_translation": "MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002898" + ], + [ + "gene_synonym", + "ECK0841" + ], + [ + "gene_synonym", + "EcoGene:EG12842" + ], + [ + "gene_synonym", + "GI:16128818" + ], + [ + "gene_synonym", + "GeneID:945481" + ], + [ + "gene_synonym", + "JW0834" + ], + [ + "gene_synonym", + "NP_415371.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46119" + ], + [ + "gene_synonym", + "b0850" + ], + [ + "gene_synonym", + "ybjC" + ] + ], + "dna_sequence": "ATGCGCGCGATCGGTAAATTGCCTAAAGGCGTGTTGATACTGGAATTTATCGGAATGATGCTACTGGCGGTGGCGCTGCTGTCGGTAAGCGACTCCCTGTCGCTGCCTGAGCCATTTTCTCGGCCAGAAGTGCAGATTCTGATGATTTTTCTCGGTGTTTTGCTCATGCTTCCCGCTGCGGTGGTGGTTATTCTTCAGGTGGCAAAACGTCTTGCCCCACAGCTGATGAACCGTCCACCGCAATATTCACGTTCAGAAAGAGAAAAAGATAATGACGCCAACCATTGA", + "dna_sequence_length": 288, + "functions": [ + "DUF1418 family protein" + ], + "id": "CDS_832", + "location": [ + [ + "NC_000913", + 890913, + "+", + 288 + ] + ], + "md5": "c879501c5d2061e5f3450705e979cd1c", + "parent_gene": "", + "protein_md5": "4954e971493e7256b7dd516ce78df469", + "protein_translation": "MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002900" + ], + [ + "gene_synonym", + "ECK0842" + ], + [ + "gene_synonym", + "EcoGene:EG11261" + ], + [ + "gene_synonym", + "GI:16128819" + ], + [ + "gene_synonym", + "GeneID:945483" + ], + [ + "gene_synonym", + "JW0835" + ], + [ + "gene_synonym", + "NP_415372.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17117" + ], + [ + "gene_synonym", + "b0851" + ], + [ + "gene_synonym", + "mda18" + ], + [ + "gene_synonym", + "mdaA" + ], + [ + "gene_synonym", + "nfsA" + ], + [ + "gene_synonym", + "snrA" + ], + [ + "gene_synonym", + "ybjB" + ] + ], + "dna_sequence": "ATGACGCCAACCATTGAACTTATTTGTGGCCATCGCTCCATTCGCCATTTCACTGATGAACCCATTTCCGAAGCGCAGCGTGAGGCGATTATTAACAGCGCCCGTGCGACGTCCAGTTCCAGTTTTTTGCAGTGCAGTAGCATTATTCGCATTACCGACAAAGCGTTACGTGAAGAACTGGTGACGCTGACCGGCGGGCAAAAACACGTAGCGCAAGCGGCGGAGTTCTGGGTGTTCTGTGCCGACTTTAACCGCCATTTACAGATCTGTCCGGATGCTCAGCTCGGCCTGGCGGAACAACTGTTGCTCGGTGTCGTTGATACGGCAATGATGGCGCAGAATGCATTAATCGCAGCGGAATCGCTGGGATTGGGCGGGGTATATATCGGCGGCCTGCGCAATAATATTGAAGCGGTGACGAAACTGCTTAAATTACCGCAGCATGTTCTGCCGCTGTTTGGGCTGTGCCTTGGCTGGCCTGCGGATAATCCGGATCTTAAGCCGCGTTTACCGGCCTCCATTTTGGTGCATGAAAACAGCTATCAACCGCTGGATAAAGGCGCACTGGCGCAGTATGACGAGCAACTGGCGGAATATTACCTCACCCGTGGCAGCAATAATCGCCGGGATACCTGGAGCGATCATATCCGCCGAACAATCATTAAAGAAAGCCGCCCATTTATTCTGGATTATTTGCACAAACAGGGTTGGGCGACGCGCTAA", + "dna_sequence_length": 723, + "functions": [ + "nitroreductase A, NADPH-dependent, FMN-dependent" + ], + "id": "CDS_833", + "location": [ + [ + "NC_000913", + 891184, + "+", + 723 + ] + ], + "md5": "a4dbdebf662cb24c3e3c2a17a4951a10", + "parent_gene": "", + "protein_md5": "03bc60d22bbef4fb47c40413718dd28a", + "protein_translation": "MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWATR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002903" + ], + [ + "gene_synonym", + "ECK0843" + ], + [ + "gene_synonym", + "EcoGene:EG10852" + ], + [ + "gene_synonym", + "GI:16128820" + ], + [ + "gene_synonym", + "GeneID:945484" + ], + [ + "gene_synonym", + "JW0836" + ], + [ + "gene_synonym", + "NP_415373.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0U4" + ], + [ + "gene_synonym", + "b0852" + ], + [ + "gene_synonym", + "nek" + ], + [ + "gene_synonym", + "rimK" + ] + ], + "dna_sequence": "GTGAAAATTGCCATATTGTCCCGGGATGGAACGCTCTATTCGTGTAAGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGATGGAGGTGAATGCGTCGCCGGGGCTGGAAGGAATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCCGCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAG", + "dna_sequence_length": 903, + "functions": [ + "ribosomal protein S6 modification protein" + ], + "id": "CDS_834", + "location": [ + [ + "NC_000913", + 891967, + "+", + 903 + ] + ], + "md5": "149315352b66268dbe7077e1b4411f4e", + "parent_gene": "", + "protein_md5": "71ebcaf16060a71a5efbe114597cc052", + "protein_translation": "MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATTEYCLKTGG", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002910" + ], + [ + "gene_synonym", + "ECK0844" + ], + [ + "gene_synonym", + "EcoGene:EG13683" + ], + [ + "gene_synonym", + "GI:16128821" + ], + [ + "gene_synonym", + "GeneID:945482" + ], + [ + "gene_synonym", + "JW0837" + ], + [ + "gene_synonym", + "NP_415374.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAY6" + ], + [ + "gene_synonym", + "b0853" + ], + [ + "gene_synonym", + "ybjN" + ] + ], + "dna_sequence": "ATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATCTGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGA", + "dna_sequence_length": 477, + "functions": [ + "negative regulator of motility", + "multicopy suppressor of coaA(Ts)" + ], + "id": "CDS_835", + "location": [ + [ + "NC_000913", + 892957, + "+", + 477 + ] + ], + "md5": "841d20724bd6cc8546c908ee0392356b", + "parent_gene": "", + "protein_md5": "6ce61e826b17c7c70a5e13980790f51c", + "protein_translation": "MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002913" + ], + [ + "gene_synonym", + "ECK0845" + ], + [ + "gene_synonym", + "EcoGene:EG11629" + ], + [ + "gene_synonym", + "GI:16128822" + ], + [ + "gene_synonym", + "GeneID:945480" + ], + [ + "gene_synonym", + "JW0838" + ], + [ + "gene_synonym", + "NP_415375.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31133" + ], + [ + "gene_synonym", + "b0854" + ], + [ + "gene_synonym", + "potF" + ] + ], + "dna_sequence": "ATGACCGCCTTAAATAAAAAATGGCTATCGGGTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTGAACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCAGCCGCTGGACAAAAGCAAATTGCCGGAGTGGAAGAATCTCGACCCGGAACTGCTGAAGCTGGTCGCCAAACACGATCCCGACAATAAATTTGCTATGCCCTATATGTGGGCGACGACCGGGATTGGCTATAACGTTGATAAAGTTAAAGCGGTGCTGGGCGAAAACGCGCCCGTCGATAGCTGGGACTTGATCCTCAAACCTGAAAATCTGGAAAAACTGAAAAGCTGCGGTGTCTCTTTCCTGGATGCGCCAGAAGAAGTTTTTGCTACCGTGTTGAATTATCTCGGCAAAGATCCCAACAGCACTAAAGCGGATGATTACACCGGACCGGCAACAGATCTGCTGTTAAAGCTGCGCCCGAACATTCGTTATTTCCATTCATCTCAATACATTAACGACCTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTCCGTGAGAACCCAGGTATTTATCCGCCTGCGGATGTTCGTGCGAAGCTGTTCACTCTGAAAGTGCAGGATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAA", + "dna_sequence_length": 1113, + "functions": [ + "putrescine ABC transporter periplasmic binding protein" + ], + "id": "CDS_836", + "location": [ + [ + "NC_000913", + 893784, + "+", + 1113 + ] + ], + "md5": "77d05689f5f54b232ca79caa9fd286c1", + "parent_gene": "", + "protein_md5": "8ae54949e778072dcbd0f5a88bc92aae", + "protein_translation": "MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002915" + ], + [ + "gene_synonym", + "ECK0846" + ], + [ + "gene_synonym", + "EcoGene:EG11630" + ], + [ + "gene_synonym", + "GI:90111177" + ], + [ + "gene_synonym", + "GeneID:945476" + ], + [ + "gene_synonym", + "JW5818" + ], + [ + "gene_synonym", + "NP_415376.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31134" + ], + [ + "gene_synonym", + "b0855" + ], + [ + "gene_synonym", + "potG" + ] + ], + "dna_sequence": "GTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGGATGATGTCAGCCTGACCATCTACAAAGGTGAAATCTTCGCGCTGCTGGGCGCATCCGGCTGTGGCAAGTCCACGCTGCTGCGTATGCTGGCAGGTTTCGAACAACCTTCTGCCGGACAGATAATGCTTGATGGCGTCGATTTGTCACAGGTTCCGCCTTACCTGCGCCCCATCAATATGATGTTTCAGTCTTACGCGCTGTTTCCGCATATGACCGTGGAACAGAACATCGCTTTTGGCCTGAAACAGGACAAACTACCGAAAGCGGAAATTGCCAGCCGGGTCAATGAGATGCTCGGCCTGGTGCATATGCAGGAGTTCGCCAAACGCAAACCGCATCAGCTTTCCGGTGGTCAGCGACAACGTGTGGCCCTGGCCCGAAGCCTTGCGAAGCGCCCGAAACTATTACTGCTCGATGAGCCGATGGGCGCGCTGGATAAAAAGCTGCGTGACAGGATGCAGCTTGAAGTGGTGGATATTCTGGAGCGCGTCGGTGTGACTTGTGTGATGGTCACCCACGATCAGGAAGAGGCGATGACCATGGCGGGGCGCATCGCCATTATGAATCGTGGGAAATTTGTCCAGATTGGCGAACCGGAAGAGATCTACGAGCATCCGACTACCCGCTATAGCGCCGAATTTATTGGCTCGGTAAACGTCTTTGAAGGCGTACTCAAAGAGCGTCAGGAAGATGGCCTGGTGCTTGATTCGCCGGGGCTGGTGCATCCACTGAAAGTCGACGCGGATGCCTCGGTGGTCGATAACGTGCCGGTACATGTGGCGCTGCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAA", + "dna_sequence_length": 1134, + "functions": [ + "putrescine ABC transporter ATPase" + ], + "id": "CDS_837", + "location": [ + [ + "NC_000913", + 894991, + "+", + 1134 + ] + ], + "md5": "07daab8bc17acd38fa24bd5849d1f654", + "parent_gene": "", + "protein_md5": "299aa14268eb56d994ffae0e6d238b5a", + "protein_translation": "MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002917" + ], + [ + "gene_synonym", + "ECK0847" + ], + [ + "gene_synonym", + "EcoGene:EG11631" + ], + [ + "gene_synonym", + "GI:16128824" + ], + [ + "gene_synonym", + "GeneID:945475" + ], + [ + "gene_synonym", + "JW0840" + ], + [ + "gene_synonym", + "NP_415377.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31135" + ], + [ + "gene_synonym", + "b0856" + ], + [ + "gene_synonym", + "potH" + ] + ], + "dna_sequence": "ATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGTCATTGCGTTGCCATATATCTGGTTGATCTTGCTGTTTCTGCTGCCATTTCTGATTGTCTTTAAAATAAGCCTGGCGGAGATGGCGCGCGCTATTCCACCTTATACCGAACTGATGGAGTGGGCTGACGGGCAACTGTCCATCACTCTTAATCTCGGTAATTTTCTGCAACTGACCGACGATCCGCTCTATTTCGATGCTTATCTCCAGTCGCTACAGGTGGCTGCGATTTCGACATTTTGCTGTTTACTGATCGGCTATCCGCTGGCGTGGGCGGTGGCGCACAGTAAGCCTTCGACCCGTAATATTTTATTACTACTGGTGATCCTGCCGTCGTGGACCTCGTTTCTGATCCGCGTTTATGCCTGGATGGGAATATTAAAAAACAACGGTGTGCTGAATAATTTTCTGCTGTGGCTGGGGGTTATCGATCAACCGCTGACCATTCTGCATACCAATCTGGCCGTTTATATCGGCATTGTTTACGCTTACGTGCCGTTTATGGTACTGCCGATTTATACCGCGTTGATTCGTATTGATTATTCGCTGGTGGAAGCAGCGCTGGATCTCGGTGCACGACCGCTGAAAACGTTCTTTACTGTGATCGTGCCGCTGACTAAAGGTGGGATTATTGCCGGATCGATGCTGGTGTTTATCCCGGCTGTGGGCGAGTTTGTGATCCCGGAACTGCTCGGTGGCCCGGACAGCATCATGATCGGGCGCGTGCTATGGCAAGAGTTTTTCAATAACCGCGACTGGCCGGTGGCCTCGGCGGTAGCGATCATCATGTTGCTGCTGCTAATTGTGCCGATAATGTGGTTCCACAAACACCAGCAAAAAAGCGTGGGAGAACACGGATGA", + "dna_sequence_length": 954, + "functions": [ + "putrescine ABC transporter permease" + ], + "id": "CDS_838", + "location": [ + [ + "NC_000913", + 896134, + "+", + 954 + ] + ], + "md5": "01cd393be45300d1e7326f6a5f378dfc", + "parent_gene": "", + "protein_md5": "fbb9ceae98d4f58b446a0a1a0d3eab79", + "protein_translation": "MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002919" + ], + [ + "gene_synonym", + "ECK0848" + ], + [ + "gene_synonym", + "EcoGene:EG11632" + ], + [ + "gene_synonym", + "GI:16128825" + ], + [ + "gene_synonym", + "GeneID:945485" + ], + [ + "gene_synonym", + "JW0841" + ], + [ + "gene_synonym", + "NP_415378.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL1" + ], + [ + "gene_synonym", + "b0857" + ], + [ + "gene_synonym", + "potI" + ] + ], + "dna_sequence": "ATGAATAATTTACCGGTAGTTCGTTCGCCCTGGCGGATTGTGATTTTGCTGCTGGGCTTTACCTTTCTCTACGCGCCAATGCTGATGCTGGTTATCTATTCGTTTAACAGCTCGAAGCTGGTGACGGTGTGGGCCGGCTGGTCAACGCGCTGGTATGGTGAGTTATTGCGCGATGACGCGATGATGAGTGCGGTTGGTTTAAGTCTGACAATTGCGGCCTGTGCGGCGACGGCGGCGGCGATCCTCGGAACTATTGCGGCGGTGGTGCTGGTGCGCTTTGGCAGGTTTCGCGGATCAAATGGCTTTGCCTTTATGATCACCGCGCCGCTGGTAATGCCAGATGTCATCACGGGCTTGTCGCTGTTGTTATTATTCGTCGCGCTTGCTCATGCCATTGGCTGGCCTGCGGACCGCGGTATGCTCACCATCTGGCTGGCGCATGTCACTTTTTGTACGGCTTATGTGGCGGTCGTTATTTCTTCAAGATTGCGGGAACTGGATCGCTCGATAGAAGAAGCAGCGATGGATCTCGGTGCGACGCCGCTGAAAGTGTTTTTCGTCATTACGCTACCGATGATCATGCCCGCGATCATTTCTGGCTGGTTACTGGCTTTTACTTTGTCGCTTGATGATCTGGTGATCGCCAGCTTTGTTTCCGGGCCGGGAGCCACCACGTTACCGATGCTGGTCTTTTCCAGCGTGCGGATGGGGGTGAATCCGGAAATCAACGCCCTGGCAACATTGATCCTCGGCGCGGTCGGAATTGTCGGATTTATCGCCTGGTATCTGATGGCTCGCGCAGAAAAACAGCGGATACGCGACATCCAGCGTGCAAGACGTGGCTGA", + "dna_sequence_length": 846, + "functions": [ + "putrescine ABC transporter permease" + ], + "id": "CDS_839", + "location": [ + [ + "NC_000913", + 897084, + "+", + 846 + ] + ], + "md5": "26a9f8aa8a3df4008bef98fe22c1dd39", + "parent_gene": "", + "protein_md5": "9ffdf18182857a96a2180abdb7226f77", + "protein_translation": "MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQRARRG", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002922" + ], + [ + "gene_synonym", + "ECK0849" + ], + [ + "gene_synonym", + "EcoGene:EG13684" + ], + [ + "gene_synonym", + "GI:16128826" + ], + [ + "gene_synonym", + "GeneID:945488" + ], + [ + "gene_synonym", + "JW0842" + ], + [ + "gene_synonym", + "NP_415379.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAZ0" + ], + [ + "gene_synonym", + "b0858" + ], + [ + "gene_synonym", + "ybjO" + ] + ], + "dna_sequence": "ATGGAAGACGAAACGTTGGGATTTTTTAAGAAAACATCTTCATCTCATGCTCGCCTGAATGTGCCTGCGCTGGTGCAGGTGGCGGCGCTCGCCATTATTATGATCCGTGGCCTCGACGTGCTGATGATTTTCAATACGCTGGGCGTGCGCGGTATTGGCGAGTTCATTCATCGCAGCGTACAAACCTGGAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTGGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGATGCTGCTGTTCGTTCCCTCGACCAGTCGGCGGTTCTTCCAGTTGCAATAA", + "dna_sequence_length": 489, + "functions": [ + "DUF2593 family inner membrane protein" + ], + "id": "CDS_840", + "location": [ + [ + "NC_000913", + 897989, + "+", + 489 + ] + ], + "md5": "f4f0ac2a4fc954ed03da8fdfbe038cb0", + "parent_gene": "", + "protein_md5": "5c8582d7e6f35166b358ca79e5b5c576", + "protein_translation": "MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002924" + ], + [ + "gene_synonym", + "ECK0850" + ], + [ + "gene_synonym", + "EcoGene:EG13427" + ], + [ + "gene_synonym", + "GI:16128827" + ], + [ + "gene_synonym", + "GeneID:947260" + ], + [ + "gene_synonym", + "JW0843" + ], + [ + "gene_synonym", + "NP_415380.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75817" + ], + [ + "gene_synonym", + "b0859" + ], + [ + "gene_synonym", + "rlmC" + ], + [ + "gene_synonym", + "rumB" + ], + [ + "gene_synonym", + "ybjF" + ] + ], + "dna_sequence": "ATGCAGTGCGCACTTTACGACGCGGGTCGCTGTCGTTCCTGTCAGTGGATAATGCAGCCGATTCCAGAGCAACTCTCCGCTAAAACCGCCGATCTTAAAAATCTGCTCGCCGACTTTCCGGTTGAGGAATGGTGCGCGCCGGTGTCAGGCCCGGAACAAGGGTTTCGTAATAAAGCCAAAATGGTGGTGAGTGGTAGCGTTGAAAAACCACTGCTCGGTATGCTGCATCGCGATGGCACACCAGAAGACCTTTGTGACTGCCCGCTTTATCCTGCCTCATTTGCGCCCGTTTTTGCGGCGCTAAAACCGTTTATCGCCCGAGCGGGGTTAACGCCCTACAACGTGGCGCGTAAGCGTGGCGAACTGAAATACATTCTGCTGACTGAAAGCCAGAGTGATGGAGGCATGATGCTGCGCTTTGTACTGCGTTCTGATACCAAGCTGGCGCAACTGCGTAAGGCGCTGCCGTGGTTACACGAACAACTACCGCAGCTGAAAGTTATTACCGTCAATATTCAGCCGGTACATATGGCGATTATGGAAGGGGAGACGGAGATCTACCTGACCGAACAACAGGCACTGGCGGAGCGTTTTAATGACGTACCGCTGTGGATCCGTCCGCAAAGTTTCTTCCAGACTAATCCGGCGGTCGCCAGCCAGTTGTACGCCACCGCGCGCGACTGGGTACGACAGCTGCCGGTTAAACATATGTGGGATCTGTTCTGCGGTGTGGGGGGCTTTGGTTTACACTGCGCGACGCCTGACATGCAGTTAACCGGGATCGAAATTGCATCAGAGGCCATTGCCTGTGCAAAGCAGTCAGCCGCTGAACTGGGCTTAACGCGTTTGCAATTTCAGGCGCTGGACTCCACTCAGTTTGCCACCGCTCAGGGGGATGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAA", + "dna_sequence_length": 1128, + "functions": [ + "23S rRNA m(5)U747 methyltransferase, SAM-dependent" + ], + "id": "CDS_841", + "location": [ + [ + "NC_000913", + 898518, + "+", + 1128 + ] + ], + "md5": "faaf6898ddca29d225491523ebdc14a1", + "parent_gene": "", + "protein_md5": "0c87277f05d918ac6c3d6a82ffdb5a9c", + "protein_translation": "MQCALYDAGRCRSCQWIMQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHEQLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGDVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002927" + ], + [ + "gene_synonym", + "ECK0851" + ], + [ + "gene_synonym", + "EcoGene:EG11628" + ], + [ + "gene_synonym", + "GI:16128828" + ], + [ + "gene_synonym", + "GeneID:948981" + ], + [ + "gene_synonym", + "JW0844" + ], + [ + "gene_synonym", + "NP_415381.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30860" + ], + [ + "gene_synonym", + "artJ" + ], + [ + "gene_synonym", + "b0860" + ] + ], + "dna_sequence": "ATGAAAAAGTTAGTTCTTGCCGCTTTACTTGCTTCCTTTACTTTCGGTGCTTCTGCCGCAGAGAAAATCAATTTTGGCGTTTCAGCCACCTATCCACCCTTTGAATCTATAGGTGCTAATAATGAGATTGTCGGCTTTGATATCGATCTGGCAAAAGCCTTGTGCAAACAAATGCAGGCAGAATGTACTTTTACTAATCACGCGTTCGACAGCCTGATCCCGTCCCTGAAATTCAGAAAATATGACGCCGTAATCTCCGGTATGGATATCACCCCGGAGCGTAGCAAACAGGTATCGTTTACCACGCCCTACTATGAAAACTCAGCCGTCGTGATTGCCAAAAAAGATACCTACAAAACGTTTGCCGATCTGAAAGGCAAACGTATTGGGATGGAAAACGGTACTACGCACCAGAAATATATTCAGGATCAGCACCCGGAAGTGAAAACTGTCTCTTATGACAGTTATCAGAATGCCTTTATCGATCTGAAAAATGGTCGTATTGATGGGGTATTTGGTGACACAGCGGTGGTAAACGAATGGCTGAAAACCAATCCACAACTTGGTGTTGCTACTGAGAAAGTGACCGATCCGCAATATTTTGGCACCGGCCTGGGCATCGCTGTACGTCCGGATAACAAAGCCCTGCTGGAAAAACTGAATAACGCGCTGGCAGCAATTAAAGCTGACGGTACTTATCAAAAAATCAGTGACCAGTGGTTCCCACAGTAA", + "dna_sequence_length": 732, + "functions": [ + "arginine ABC transporter periplasmic binding protein" + ], + "id": "CDS_842", + "location": [ + [ + "NC_000913", + 900575, + "-", + 732 + ] + ], + "md5": "0b76474ca89be2e186bd766675d3e24e", + "parent_gene": "", + "protein_md5": "3a0c976b2231c7152391e91319e73a73", + "protein_translation": "MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKISDQWFPQ", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002931" + ], + [ + "gene_synonym", + "ECK0852" + ], + [ + "gene_synonym", + "EcoGene:EG11627" + ], + [ + "gene_synonym", + "GI:16128829" + ], + [ + "gene_synonym", + "GeneID:949066" + ], + [ + "gene_synonym", + "JW0845" + ], + [ + "gene_synonym", + "NP_415382.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE30" + ], + [ + "gene_synonym", + "artM" + ], + [ + "gene_synonym", + "b0861" + ] + ], + "dna_sequence": "ATGTTTGAGTATTTACCCGAACTGATGAAAGGGCTACACACCAGCCTGACGCTAACCGTTGCCTCGCTGATTGTGGCACTGATTCTGGCATTGATTTTTACCATCATCCTGACGCTGAAAACGCCGGTGCTGGTGTGGCTGGTGCGGGGTTATATCACGCTGTTTACCGGTACGCCGCTGCTGGTGCAGATCTTCCTGATTTATTACGGGCCGGGCCAGTTTCCGACTTTGCAGGAGTATCCGGCACTGTGGCATTTGTTGTCAGAACCGTGGTTATGTGCGCTGATTGCGTTGTCGCTGAATAGTGCGGCGTATACCACGCAGCTGTTTTACGGTGCAATTCGTGCGATCCCGGAAGGTCAGTGGCAGTCCTGTAGCGCCCTGGGAATGAGCAAAAAAGATACGCTGGCGATCCTGCTGCCGTATGCCTTTAAACGCTCGCTCTCTTCTTATTCCAACGAAGTGGTGCTGGTATTCAAAAGTACCTCTCTGGCATACACCATTACGCTGATGGAAGTGATGGGATACAGCCAGTTGTTGTACGGACGCACCTACGATGTAATGGTGTTCGGTGCGGCAGGGATTATTTACCTGGTCGTTAACGGCCTGCTGACGCTGATGATGCGTCTGATCGAGCGCAAAGCGCTGGCATTCGAACGGCGAAATTAA", + "dna_sequence_length": 669, + "functions": [ + "arginine ABC transporter permease" + ], + "id": "CDS_843", + "location": [ + [ + "NC_000913", + 901534, + "-", + 669 + ] + ], + "md5": "3dc6149452e33f5c96a2efba264c29f1", + "parent_gene": "", + "protein_md5": "871e57acd61164ecb3799e3d96dfe186", + "protein_translation": "MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAFERRN", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002933" + ], + [ + "gene_synonym", + "ECK0853" + ], + [ + "gene_synonym", + "EcoGene:EG11626" + ], + [ + "gene_synonym", + "GI:16128830" + ], + [ + "gene_synonym", + "GeneID:949046" + ], + [ + "gene_synonym", + "JW0846" + ], + [ + "gene_synonym", + "NP_415383.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE34" + ], + [ + "gene_synonym", + "artQ" + ], + [ + "gene_synonym", + "b0862" + ] + ], + "dna_sequence": "ATGAATGAATTTTTTCCTTTAGCAAGCGCCGCCGGGATGACCGTCGGCCTTGCCGTTTGTGCATTGATTGTCGGGCTGGCGCTGGCGATGTTCTTTGCGGTATGGGAGTCGGCAAAATGGCGTCCTGTCGCGTGGGCAGGTTCAGCGCTGGTAACCATTCTGCGTGGCCTGCCAGAAATTCTGGTGGTGCTGTTTATCTATTTTGGCTCCTCGCAGCTGCTGCTGACGCTTTCGGATGGCTTCACTATCAATCTTGGGTTCGTGCAGATCCCAGTGCAGATGGACATTGAGAACTTCGACGTTAGCCCGTTCCTTTGTGGTGTCATCGCTCTGTCACTGCTGTATGCCGCCTATGCCTCGCAAACGCTTCGGGGCGCGTTGAAAGCGGTGCCGGTGGGTCAGTGGGAGTCTGGTCAGGCGCTGGGGCTGTCGAAATCGGCTATCTTTTTCCGTCTGGTGATGCCGCAGATGTGGCGTCATGCGCTGCCTGGCCTCGGTAACCAGTGGCTGGTGCTGCTGAAAGATACCGCGCTGGTCAGTTTGATTAGTGTGAATGATTTAATGCTGCAAACAAAAAGCATCGCTACTCGTACCCAGGAACCATTTACCTGGTACATTGTGGCGGCGGCGATTTACCTGGTGATCACCCTGCTCAGTCAGTACATTCTCAAACGCATTGACCTGCGCGCGACACGTTTTGAGCGGAGGCCCAGCTAA", + "dna_sequence_length": 717, + "functions": [ + "arginine ABC transporter permease" + ], + "id": "CDS_844", + "location": [ + [ + "NC_000913", + 902250, + "-", + 717 + ] + ], + "md5": "8b3147192ba1abb9ab948c37df33ea7a", + "parent_gene": "", + "protein_md5": "29a99a73c8fbca0837073871c144f116", + "protein_translation": "MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002937" + ], + [ + "gene_synonym", + "ECK0854" + ], + [ + "gene_synonym", + "EcoGene:EG11625" + ], + [ + "gene_synonym", + "GI:16128831" + ], + [ + "gene_synonym", + "GeneID:948988" + ], + [ + "gene_synonym", + "JW0847" + ], + [ + "gene_synonym", + "NP_415384.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30859" + ], + [ + "gene_synonym", + "artI" + ], + [ + "gene_synonym", + "b0863" + ] + ], + "dna_sequence": "ATGAAAAAAGTTCTGATTGCCGCGTTAATTGCAGGTTTTAGTCTTTCCGCCACAGCTGCCGAAACCATTCGTTTTGCTACCGAAGCCTCCTATCCTCCGTTTGAATCGATTGATGCAAACAACCAGATCGTTGGTTTTGACGTCGACCTGGCACAAGCGCTGTGTAAAGAGATTGATGCAACCTGCACTTTCTCTAACCAGGCGTTTGACAGCCTGATCCCAAGCCTGAAATTCCGTCGCGTAGAAGCCGTGATGGCGGGCATGGATATCACTCCGGAGCGTGAAAAGCAGGTGCTGTTTACCACCCCGTACTATGACAACTCTGCCCTGTTTGTGGGTCAGCAAGGCAAATACACCAGTGTTGATCAGCTGAAAGGCAAAAAAGTCGGCGTACAGAACGGGACGACACACCAGAAATTCATTATGGATAAGCACCCGGAAATCACTACCGTTCCGTATGACAGCTACCAGAACGCAAAACTGGATCTGCAAAACGGGCGTATCGACGGCGTCTTCGGTGACACCGCAGTGGTCACTGAGTGGCTGAAAGATAACCCGAAACTGGCGGCGGTGGGCGACAAAGTGACCGATAAAGATTACTTCGGCACTGGCCTCGGCATCGCGGTACGTCAGGGCAACACTGAGCTGCAGCAGAAACTCAACACTGCGCTGGAAAAAGTGAAGAAAGATGGCACTTACGAAACCATCTACAACAAATGGTTCCAGAAGTAA", + "dna_sequence_length": 732, + "functions": [ + "arginine transporter subunit" + ], + "id": "CDS_845", + "location": [ + [ + "NC_000913", + 902988, + "-", + 732 + ] + ], + "md5": "9537634be8d9e237cc117ca3239d018b", + "parent_gene": "", + "protein_md5": "8dada9975a23ec7b183368bc56ba560f", + "protein_translation": "MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKWFQK", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002939" + ], + [ + "gene_synonym", + "ECK0855" + ], + [ + "gene_synonym", + "EcoGene:EG11624" + ], + [ + "gene_synonym", + "GI:16128832" + ], + [ + "gene_synonym", + "GeneID:945489" + ], + [ + "gene_synonym", + "JW0848" + ], + [ + "gene_synonym", + "NP_415385.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAF6" + ], + [ + "gene_synonym", + "artP" + ], + [ + "gene_synonym", + "b0864" + ] + ], + "dna_sequence": "ATGAGTATTCAATTAAACGGCATTAATTGCTTCTACGGCGCGCATCAGGCGCTGTTCGATATCACGCTGGATTGCCCACAGGGCGAAACGCTGGTGTTACTTGGCCCCAGCGGCGCGGGTAAAAGCTCGCTGCTGCGTGTACTCAATCTGCTTGAGATGCCGCGCTCCGGTACGCTCAACATTGCAGGCAACCATTTCGATTTCACCAAAACACCCTCTGACAAAGCGATTCGCGATTTGCGTCGTAACGTTGGCATGGTGTTTCAGCAATACAACCTGTGGCCGCATCTGACCGTGCAGCAAAACCTGATTGAAGCGCCCTGCCGTGTACTGGGGTTGAGTAAAGATCAGGCGCTGGCCCGTGCAGAAAAACTGCTGGAACGTCTGCGTCTCAAACCTTATAGCGATCGTTACCCGCTGCATCTTTCTGGTGGTCAGCAGCAGCGTGTTGCTATTGCCCGTGCGTTGATGATGGAACCGCAGGTACTGCTGTTCGATGAACCGACCGCCGCACTGGACCCGGAAATTACGGCACAAATCGTCAGCATCATTCGTGAGCTGGCAGAAACGAATATTACCCAGGTGATCGTCACCCACGAAGTTGAAGTGGCGCGTAAAACCGCCAGCCGAGTGGTGTATATGGAAAATGGTCATATCGTAGAACAAGGCGACGCGAGCTGCTTTACCGAGCCGCAAACCGAAGCATTTAAAAACTATCTCTCTCACTAA", + "dna_sequence_length": 729, + "functions": [ + "arginine ABC transporter ATPase" + ], + "id": "CDS_846", + "location": [ + [ + "NC_000913", + 903734, + "-", + 729 + ] + ], + "md5": "ad6c8a0967eafe7d98d7e6f58ad99012", + "parent_gene": "", + "protein_md5": "70563109a451dc689384814cec661e65", + "protein_translation": "MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTEPQTEAFKNYLSH", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002941" + ], + [ + "gene_synonym", + "ECK0856" + ], + [ + "gene_synonym", + "EcoGene:EG13685" + ], + [ + "gene_synonym", + "GI:16128833" + ], + [ + "gene_synonym", + "GeneID:945491" + ], + [ + "gene_synonym", + "JW0849" + ], + [ + "gene_synonym", + "NP_415386.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75818" + ], + [ + "gene_synonym", + "b0865" + ], + [ + "gene_synonym", + "ybjP" + ] + ], + "dna_sequence": "ATGCGCTACAGCAAATTGACAATGCTTATCCCCTGCGCACTGCTCCTCAGTGCCTGCACCACAGTCACTCCAGCTTATAAAGATAACGGCACACGCAGTGGTCCTTGCGTTGAAGGAGGCCCGGATAACGTGGCCCAGCAATTTTATGACTACCGCATTTTGCACCGCAGCAACGACATCACCGCCTTGCGCCCTTATCTGAGCGACAAACTGGCGACACTGCTTAGCGATGCCTCCCGGGATAATAACCATCGGGAACTACTGACCAACGATCCATTCTCCAGTCGAACCACCTTGCCAGATAGCGCCCACGTTGCCAGTGCATCGACTATCCCTAATCGTGATGCCCGTAACATTCCATTGCGCGTGGATCTCAAACAGGGTGACCAGGGTTGGCAGGATGAAGTGTTAATGATTCAGGAAGGCCAGTGTTGGGTCATCGACGATGTGCGTTACTTAGGCGGTAGCGTTCATGCCACGGCGGGTACGCTCCGTCAGTCCATCGAGAATCGCTAA", + "dna_sequence_length": 516, + "functions": [ + "lipoprotein" + ], + "id": "CDS_847", + "location": [ + [ + "NC_000913", + 904467, + "-", + 516 + ] + ], + "md5": "62dc5ad9fb2eb5a88addc5166671e731", + "parent_gene": "", + "protein_md5": "3cce71b9bb9f5f5fa19189455ca5884d", + "protein_translation": "MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002945" + ], + [ + "gene_synonym", + "ECK0857" + ], + [ + "gene_synonym", + "EcoGene:EG13686" + ], + [ + "gene_synonym", + "GI:16128834" + ], + [ + "gene_synonym", + "GeneID:945493" + ], + [ + "gene_synonym", + "JW0850" + ], + [ + "gene_synonym", + "NP_415387.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8C1" + ], + [ + "gene_synonym", + "b0866" + ], + [ + "gene_synonym", + "ybjQ" + ] + ], + "dna_sequence": "ATGCAATTTTCTACAACCCCAACTCTGGAAGGCCAGACCATCGTTGAATATTGCGGTGTGGTGACCGGCGAAGCGATTTTAGGTGCCAATATTTTCCGTGATTTCTTTGCCGGTATCCGCGATATCGTTGGCGGACGTTCCGGTGCGTATGAAAAAGAACTGCGTAAAGCACGGGAGATCGCCTTTGAGGAATTAGGCTCCCAGGCGCGGGCGCTGGGGGCCGATGCCGTCGTCGGTATTGATATCGACTACGAAACGGTCGGGCAAAACGGCAGTATGCTGATGGTTAGCGTCAGCGGTACGGCGGTGAAAACGCGTCGATGA", + "dna_sequence_length": 324, + "functions": [ + "UPF0145 family protein" + ], + "id": "CDS_848", + "location": [ + [ + "NC_000913", + 904593, + "+", + 324 + ] + ], + "md5": "b9bb8d69469f83da966bb548261c6119", + "parent_gene": "", + "protein_md5": "f07736405e77d34a5b38d7f3018c699a", + "protein_translation": "MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002947" + ], + [ + "gene_synonym", + "ECK0858" + ], + [ + "gene_synonym", + "EcoGene:EG13687" + ], + [ + "gene_synonym", + "GI:16128835" + ], + [ + "gene_synonym", + "GeneID:945494" + ], + [ + "gene_synonym", + "JW0851" + ], + [ + "gene_synonym", + "NP_415388.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75820" + ], + [ + "gene_synonym", + "amiD" + ], + [ + "gene_synonym", + "b0867" + ], + [ + "gene_synonym", + "ybjR" + ] + ], + "dna_sequence": "ATGAGAAGATTCTTCTGGCTGGTCGCTGCCGCTCTGTTATTGGCAGGGTGTGCAGGCGAAAAAGGCATTGTCGAGAAAGAGGGATATCAGCTTGATACCCGACGCCAGGCGCAGGCGGCGTATCCGCGCATTAAAGTGCTGGTGATCCACTACACCGCAGATGATTTTGATAGCTCGCTGGCGACACTGACCGATAAGCAGGTCAGCTCGCATTATCTGGTCCCTGCGGTACCACCGCGATACAACGGTAAACCGCGCATCTGGCAACTGGTGCCGGAACAAGAACTGGCCTGGCATGCGGGGATTAGCGCCTGGCGCGGGGCAACGCGCCTTAACGACACCTCTATTGGCATTGAGCTGGAAAACCGTGGCTGGCAAAAATCGGCCGGAGTGAAATATTTTGCCCCGTTTGAACCGGCACAGATTCAGGCGCTTATTCCACTGGCGAAAGATATTATTGCCCGTTATCACATCAAGCCGGAAAACGTAGTGGCACATGCGGATATCGCACCGCAGCGCAAAGACGATCCGGGGCCATTATTTCCCTGGCAGCAACTGGCGCAGCAGGGGATTGGTGCCTGGCCGGATGCGCAGCGGGTTAACTTTTACCTTGCCGGGCGCGCGCCGCACACACCGGTAGATACCGCGTCATTGCTGGAGCTTTTGGCGCGCTACGGTTATGACGTTAAACCTGATATGACACCGCGCGAGCAGCGGCGCGTGATTATGGCATTCCAGATGCATTTCCGCCCGACGTTATATAACGGCGAAGCGGATGCAGAAACTCAGGCGATTGCCGAAGCATTGCTGGAGAAATACGGGCAGGATTAG", + "dna_sequence_length": 831, + "functions": [ + "1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent", + "OM lipoprotein" + ], + "id": "CDS_849", + "location": [ + [ + "NC_000913", + 904913, + "+", + 831 + ] + ], + "md5": "7e8291778f67024fd024530ba0c37e56", + "parent_gene": "", + "protein_md5": "ccfd3f57e7436946f6800bbd1bef0075", + "protein_translation": "MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002949" + ], + [ + "gene_synonym", + "ECK0859" + ], + [ + "gene_synonym", + "EcoGene:EG13688" + ], + [ + "gene_synonym", + "GI:90111178" + ], + [ + "gene_synonym", + "GeneID:945495" + ], + [ + "gene_synonym", + "JW5819" + ], + [ + "gene_synonym", + "NP_415389.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75821" + ], + [ + "gene_synonym", + "b0868" + ], + [ + "gene_synonym", + "ybjS" + ] + ], + "dna_sequence": "ATGAAGGTACTGGTTACCGGCGCCACCAGCGGCTTAGGTCGAAACGCGGTAGAGTTTTTATGCCAGAAAGGCATCAGCGTGCGAGCGACCGGTCGCAACGAGGCAATGGGCAAATTGCTGGAAAAAATGGGCGCAGAGTTTGTTCCGGCGGATCTGACCGAGCTGGTTTCATCACAAGCTAAAGTGATGCTCGCGGGCATTGATACGCTGTGGCACTGCTCCAGCTTTACCTCACCCTGGGGGACACAACAGGCTTTCGATCTGGCTAACGTTCGCGCCACTCGCCGCCTGGGTGAATGGGCTGTCGCCTGGGGTGTGCGTAACTTTATTCATATCTCTTCCCCCTCCCTGTACTTCGATTATCACCACCATCGCGATATTAAAGAAGATTTTCGCCCTCACCGCTTCGCCAACGAGTTTGCCCGCAGCAAAGCAGCCAGCGAAGAAGTGATCAATATGCTTTCGCAGGCGAATCCACAAACGCGCTTTACTATTCTGCGCCCACAAAGTCTGTTCGGACCGCACGATAAAGTCTTTATTCCCCGTCTGGCGCATATGATGCACCACTACGGCAGTATTCTGTTACCGCATGGCGGCAGTGCGCTGGTCGATATGACCTACTATGAAAATGCCGTGCACGCAATGTGGCTGGCAAGCCAGGAAGCCTGCGATAAGCTACCTTCCGGGCGTGTGTACAACATCACCAACGGCGAGCATCGCACACTGCGCAGCATCGTGCAGAAGCTGATCGACGAGTTGAATATTGACTGTCGTATTCGTTCCGTCCCCTACCCGATGCTGGATATGATCGCCCGCAGCATGGAGCGTTTAGGCCGCAAGTCAGCAAAAGAGCCGCCGCTGACCCACTACGGCGTCTCCAAGTTGAATTTTGACTTTACGCTGGATATTACGCGTGCGCAGGAAGAGTTAGGTTATCAGCCGGTCATCACCCTGGATGAAGGTATCGAGAAAACTGCCGCCTGGCTACGCGACCACGGAAAACTGCCGCGCTAA", + "dna_sequence_length": 1014, + "functions": [ + "putative NAD(P)H-dependent oxidoreductase" + ], + "id": "CDS_850", + "location": [ + [ + "NC_000913", + 906753, + "-", + 1014 + ] + ], + "md5": "f722deca7f4ca1c86b5d67ccd4577597", + "parent_gene": "", + "protein_md5": "628b00f453d89ebb4a17c9cacdf34544", + "protein_translation": "MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKLPR", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002951" + ], + [ + "gene_synonym", + "ECK0860" + ], + [ + "gene_synonym", + "EcoGene:EG13689" + ], + [ + "gene_synonym", + "GI:90111179" + ], + [ + "gene_synonym", + "GeneID:945496" + ], + [ + "gene_synonym", + "JW5116" + ], + [ + "gene_synonym", + "NP_415390.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75822" + ], + [ + "gene_synonym", + "b0869" + ], + [ + "gene_synonym", + "ybjT" + ] + ], + "dna_sequence": "GTGCCGCAACGCATTTTAGTTCTCGGTGCCAGTGGCTACATTGGTCAGCATCTGGTGCGCACACTCAGCCAGCAAGGGCATCAGATCCTGGCGGCGGCACGTCATGTCGACAGGCTTGCAAAGCTGCAACTGGCAAACGTCAGTTGCCATAAAGTCGATCTCAGCTGGCCGGATAACCTACCGGCCCTGTTGCAGGATATCGATACGGTCTATTTTCTGGTGCACAGCATGGGCGAAGGCGGCGATTTTATCGCTCAGGAGCGCCAGGTGGCTCTCAACGTCCGCGATGCGCTACGTGAAGTACCAGTTAAGCAATTAATCTTTCTTAGTTCGTTGCAGGCCCCGCCACATGAGCAGTCGGATCATCTGCGTGCTCGTCAGGCTACGGCGGACATTCTGCGTGAAGCGAATGTACCCGTGACCGAACTGCGGGCCGGAATTATCGTTGGCGCAGGTTCCGCGGCGTTCGAAGTCATGCGCGATATGGTCTACAACCTGCCAGTCTTAACGCCTCCGCGCTGGGTTCGTTCACGCACCACGCCCATTGCGCTGGAAAACTTGCTGCACTATCTGGTTGCGTTGTTAGATCATCCGGCCAGCGAACACCGCATCTTCGAAGCCGCCGGACCAGAGGTGCTCAGTTATCAGCAACAGTTTGAACATTTTATGGCGGTGAGCGGTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCTGGATTTCGGTGTGGTTTCTCAATGTGATTACTTCCGTACCGCCCACCACCGCCAGGGCGTTGATTCAGGGGCTGAAACACGATCTGCTGGCGGATGATACCGCGCTACGTGCACTCATCCCACAACGGCTGATCGCTTTCGATGACGCGGTACGTAGCACGTTGAAAGAGGAGGAAAAACTGGTCAACTCCAGCGACTGGGGCTACGACGCTCAGGCCTTTGCCCGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCTTTATGGCAGGTAGTGAACCAAATCGGCGGTAAAGAGCGTTATTTCTTTGGCAATATTTTGTGGCAGACACGGGCGTTGATGGACCGCGCGATCGGTCATAAGCTGGCGAAAGGCCGCCCGGAGCGCGAATATTTACAGACTGGCGATGCGGTGGATAGCTGGAAAGTGATTGTCGTTGAACCGGAAAAACAACTTACGTTGTTATTTGGCATGAAAGCGCCGGGGCTGGGACGACTGTGTTTTAGCCTGGAAGATAAAGGCGACTATCGTACTATCGATGTCCGCGCTTTCTGGCATCCGCACGGTATGCCGGGGCTGTTTTACTGGTTATTGATGATCCCCGCGCATCTGTTTATTTTTCGCGGAATGGCAAAACAAATCGCCAGACTGGCAGAACAAAGCACAGATTAA", + "dna_sequence_length": 1431, + "functions": [ + "putative NAD-dependent oxidoreductase" + ], + "id": "CDS_851", + "location": [ + [ + "NC_000913", + 908282, + "-", + 1431 + ] + ], + "md5": "cb67c5737042501588366de33fc6f7f5", + "parent_gene": "", + "protein_md5": "877990fb3e06667fa67de63a60f8a30a", + "protein_translation": "MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD", + "protein_translation_length": 476, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002954" + ], + [ + "gene_synonym", + "ECK0861" + ], + [ + "gene_synonym", + "EcoGene:EG13690" + ], + [ + "gene_synonym", + "GI:16128838" + ], + [ + "gene_synonym", + "GeneID:944955" + ], + [ + "gene_synonym", + "JW0854" + ], + [ + "gene_synonym", + "NP_415391.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75823" + ], + [ + "gene_synonym", + "b0870" + ], + [ + "gene_synonym", + "ltaA" + ], + [ + "gene_synonym", + "ltaE" + ], + [ + "gene_synonym", + "ybjU" + ] + ], + "dna_sequence": "ATGATTGATTTACGCAGTGATACCGTTACCCGACCAAGCCGCGCCATGCTCGAAGCGATGATGGCCGCCCCGGTTGGGGACGACGTTTACGGAGACGACCCTACCGTTAATGCTCTGCAGGACTACGCAGCAGAGCTTTCCGGTAAAGAAGCCGCCATTTTTCTGCCTACCGGCACTCAGGCCAACCTGGTCGCTCTGCTCAGTCACTGCGAACGCGGCGAAGAGTATATTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCGGTGCTGGGCAGTATTCAACCGCAACCCATAGACGCGGCTGCCGACGGCACGCTACCGCTGGATAAAGTGGCGATGAAAATCAAACCCGACGATATCCATTTCGCCCGCACCAAATTACTCAGTCTGGAAAACACCCACAACGGCAAAGTGTTGCCGCGGGAATACCTGAAAGAAGCATGGGAATTTACCCGCGAGCGCAATCTGGCGCTGCATGTTGACGGTGCGCGCATCTTTAATGCCGTGGTGGCTTACGGCTGCGAACTGAAAGAGATCACGCAATATTGTGATTCGTTCACCATTTGCCTGTCGAAAGGTCTTGGGACGCCAGTCGGTTCATTACTCGTCGGTAATCGTGATTACATTAAACGTGCCATTCGCTGGCGGAAAATGACAGGTGGCGGGATGCGCCAGTCCGGCATTCTGGCTGCCGCCGGGATATATGCCCTGAAAAATAACGTTGCGCGCTTGCAGGAAGACCACGACAACGCTGCCTGGATGGCGGAGCAGCTGCGTGAAGCAGGCGCGGATGTGATGCGTCAGGACACCAATATGCTGTTTGTTCGCGTCGGGGAAGAAAATGCTGCCGCGTTAGGCGAATACATGAAAGCGAGAAACGTGCTGATTAACGCCTCGCCGATTGTCCGCCTGGTGACGCATCTTGACGTCTCGCGCGAACAACTGGCGGAAGTCGCCGCCCACTGGCGTGCATTCCTGGCGCGTTAA", + "dna_sequence_length": 1002, + "functions": [ + "L-allo-threonine aldolase, PLP-dependent" + ], + "id": "CDS_852", + "location": [ + [ + "NC_000913", + 909294, + "-", + 1002 + ] + ], + "md5": "1b9ddc72b6c6b67bd157752f8ff0e0c3", + "parent_gene": "", + "protein_md5": "47dbf2b29d17778ff54bad48adfcdd1f", + "protein_translation": "MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTNMLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR", + "protein_translation_length": 333, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002958" + ], + [ + "gene_synonym", + "ECK0862" + ], + [ + "gene_synonym", + "EcoGene:EG10754" + ], + [ + "gene_synonym", + "GI:16128839" + ], + [ + "gene_synonym", + "GeneID:946132" + ], + [ + "gene_synonym", + "JW0855" + ], + [ + "gene_synonym", + "NP_415392.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07003" + ], + [ + "gene_synonym", + "b0871" + ], + [ + "gene_synonym", + "poxB" + ] + ], + "dna_sequence": "ATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTTAGTGACAGTCTTAATCGCATGGGCACCATCGAGTGGATGTCCACCCGCCACGAAGAAGTGGCGGCCTTTGCCGCTGGCGCTGAAGCACAACTTAGCGGAGAACTGGCGGTCTGCGCCGGATCGTGCGGCCCCGGCAACCTGCACTTAATCAACGGCCTGTTCGATTGCCACCGCAATCACGTTCCGGTACTGGCGATTGCCGCTCATATTCCCTCCAGCGAAATTGGCAGCGGCTATTTCCAGGAAACCCACCCACAAGAGCTATTCCGCGAATGTAGTCACTATTGCGAGCTGGTTTCCAGCCCGGAGCAGATCCCACAAGTACTGGCGATTGCCATGCGCAAAGCGGTGCTTAACCGTGGCGTTTCGGTTGTCGTGTTACCAGGCGACGTGGCGTTAAAACCTGCGCCAGAAGGGGCAACCATGCACTGGTATCATGCGCCACAACCAGTCGTGACGCCGGAAGAAGAAGAGTTACGCAAACTGGCGCAACTGCTGCGTTATTCCAGCAATATCGCCCTGATGTGTGGCAGCGGCTGCGCGGGGGCGCATAAAGAGTTAGTTGAGTTTGCCGGGAAAATTAAAGCGCCTATTGTTCATGCCCTGCGCGGTAAAGAACATGTCGAATACGATAATCCGTATGATGTTGGAATGACCGGGTTAATCGGCTTCTCGTCAGGTTTCCATACCATGATGAACGCCGACACGTTAGTGCTACTCGGCACGCAATTTCCCTACCGCGCCTTCTACCCGACCGATGCCAAAATCATTCAGATTGATATCAACCCAGCCAGCATCGGCGCTCACAGCAAGGTGGATATGGCACTGGTCGGCGATATCAAGTCGACTCTGCGTGCATTGCTTCCATTGGTGGAAGAAAAAGCCGATCGCAAGTTTCTGGATAAAGCGCTGGAAGATTACCGCGACGCCCGCAAAGGGCTGGACGATTTAGCTAAACCGAGCGAGAAAGCCATTCACCCGCAATATCTGGCGCAGCAAATTAGTCATTTTGCCGCCGATGACGCTATTTTCACCTGTGACGTTGGTACGCCAACGGTGTGGGCGGCACGTTATCTAAAAATGAACGGCAAGCGTCGCCTGTTAGGTTCGTTTAACCACGGTTCGATGGCTAACGCCATGCCGCAGGCGCTGGGTGCGCAGGCGACAGAGCCAGAACGTCAGGTGGTCGCCATGTGCGGCGATGGCGGTTTTAGCATGTTGATGGGCGATTTCCTCTCAGTAGTGCAGATGAAACTGCCAGTGAAAATTGTCGTCTTTAACAACAGCGTGCTGGGCTTTGTGGCGATGGAGATGAAAGCTGGTGGCTATTTGACTGACGGCACCGAACTACACGACACAAACTTTGCCCGCATTGCCGAAGCGTGCGGCATTACGGGTATCCGTGTAGAAAAAGCGTCTGAAGTTGATGAAGCCCTGCAACGCGCCTTCTCCATCGACGGTCCGGTGTTGGTGGATGTGGTGGTCGCCAAAGAAGAGTTAGCCATTCCACCGCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGAAGTGATCGAACTGGCGAAAACAAACTGGCTAAGGTAA", + "dna_sequence_length": 1719, + "functions": [ + "pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding" + ], + "id": "CDS_853", + "location": [ + [ + "NC_000913", + 911049, + "-", + 1719 + ] + ], + "md5": "86a791ed6dc47be0fe142bf5bf5dc930", + "parent_gene": "", + "protein_md5": "9179b0c0c547accff39e6304517a2ee7", + "protein_translation": "MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVALKPAPEGATMHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR", + "protein_translation_length": 572, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002960" + ], + [ + "gene_synonym", + "ECK0863" + ], + [ + "gene_synonym", + "EcoGene:EG13691" + ], + [ + "gene_synonym", + "GI:16128840" + ], + [ + "gene_synonym", + "GeneID:947660" + ], + [ + "gene_synonym", + "JW5117" + ], + [ + "gene_synonym", + "NP_415393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75824" + ], + [ + "gene_synonym", + "b0872" + ], + [ + "gene_synonym", + "hcr" + ], + [ + "gene_synonym", + "ybjV" + ] + ], + "dna_sequence": "ATGACGATGCCAACGAATCAATGCCCGTGGCGGATGCAGGTTCATCACATTACGCAAGAAACGCCGGATGTGTGGACGATTTCCCTGATTTGCCACGATTACTACCCATATCGCGCCGGGCAATATGCACTGGTCAGCGTGCGAAACTCAGCGGAAACGCTGCGTGCTTACACCATTTCCTCCACGCCAGGCGTGAGTGAATATATCACCCTGACCGTGCGGCGGATTGATGACGGTGTCGGCTCCCAGTGGCTGACGCGCGATGTAAAACGCGGTGATTATCTCTGGCTTTCGGACGCGATGGGGGAATTTACCTGCGACGATAAAGCAGAAGATAAATTCCTGTTGCTGGCGGCAGGCTGCGGCGTCACGCCGATTATGTCGATGCGTCGCTGGCTTGCGAAGAACCGTCCACAGGCCGATGTGCGGGTGATCTACAACGTGCGTACGCCGCAGGATGTTATTTTCGCCGATGAGTGGCGTAACTATCCGGTAACGCTGGTGGCAGAAAATAACGTTACCGAAGGCTTTATCGCTGGTCGTCTCACTCGCGAACTGCTGGCAGGTGTACCTGACTTAGCTTCACGTACCGTGATGACCTGCGGCCCGGCTCCGTATATGGATTGGGTAGAGCAGGAAGTGAAAGCGCTCGGCGTGACGCGTTTCTTTAAAGAGAAATTCTTCACCCCAGTAGCAGAAGCGGCGACCAGCGGTCTGAAATTCACCAAACTGCAACCGGCACGAGAATTTTACGCCCCGGTTGGCACCACGCTACTGGAGGCGCTGGAAAGCAATAACGTTCCGGTTGTCGCTGCCTGCCGTGCGGGTGTTTGCGGCTGCTGTAAGACAAAAGTGGTTTCCGGTGAATATACGGTGAGCAGCACAATGACGCTGACCGACGCCGAAATCGCTGAAGGTTACGTACTGGCCTGCTCCTGCCATCCGCAGGGGGATTTGGTTCTCGCATAA", + "dna_sequence_length": 969, + "functions": [ + "HCP oxidoreductase, NADH-dependent" + ], + "id": "CDS_854", + "location": [ + [ + "NC_000913", + 912150, + "-", + 969 + ] + ], + "md5": "ff8019735465bb65ee9ce11361ad7a47", + "parent_gene": "", + "protein_md5": "37c1b625531bd8753073f23acdb6b836", + "protein_translation": "MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA", + "protein_translation_length": 322, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002962" + ], + [ + "gene_synonym", + "ECK0864" + ], + [ + "gene_synonym", + "EcoGene:EG13692" + ], + [ + "gene_synonym", + "GI:90111180" + ], + [ + "gene_synonym", + "GeneID:946592" + ], + [ + "gene_synonym", + "JW0857" + ], + [ + "gene_synonym", + "NP_415394.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75825" + ], + [ + "gene_synonym", + "b0873" + ], + [ + "gene_synonym", + "hcp" + ], + [ + "gene_synonym", + "ybjW" + ] + ], + "dna_sequence": "ATGTTTTGTGTGCAATGTGAACAAACTATCCGTACTCCGGCAGGAAACGGCTGCTCATACGCGCAGGGGATGTGTGGTAAAACGGCGGAAACTTCTGACCTTCAGGATTTACTCATCGCGGCGCTGCAAGGGCTTTCTGCCTGGGCGGTAAAAGCGCGTGAATACGGCATCATCAACCACGATGTTGACAGCTTCGCGCCACGTGCCTTTTTCTCAACCCTGACCAACGTTAACTTCGATTCTCCGCGTATTGTCGGCTACGCTCGTGAAGCGATTGCCCTGCGCGAGGCGCTGAAAGCGCAATGCCTGGCTGTAGATGCCAACGCGCGCGTCGATAACCCGATGGCTGACCTGCAACTGGTGAGCGACGATCTCGGCGAGCTGCAACGTCAGGCAGCAGAATTTACCCCTAACAAAGATAAAGCGGCGATTGGCGAAAACATTCTCGGCCTGCGTCTGCTGTGCCTGTATGGCCTGAAAGGTGCGGCGGCCTATATGGAACACGCGCATGTTCTCGGTCAATACGACAACGATATTTATGCCCAGTACCATAAAATCATGGCGTGGCTGGGGACCTGGCCTGCCGATATGAACGCGCTTCTTGAGTGTTCAATGGAAATCGGCCAGATGAACTTCAAAGTGATGAGCATTCTGGATGCAGGCGAAACCGGTAAATACGGTCACCCGACGCCAACCCAGGTCAACGTCAAAGCGACGGCGGGTAAATGCATTCTGATTTCCGGTCACGATCTCAAAGATCTCTACAACCTGCTGGAACAGACCGAAGGCACGGGCGTTAATGTCTACACCCACGGCGAAATGCTGCCTGCGCATGGCTACCCGGAGCTGCGTAAATTCAAGCATCTGGTCGGTAACTACGGCAGCGGCTGGCAGAATCAGCAAGTGGAGTTCGCTCGTTTCCCTGGCCCCATCGTGATGACCTCGAACTGCATCATCGACCCAACCGTAGGCGCTTATGACGATCGTATCTGGACCCGCAGCATTGTTGGCTGGCCTGGCGTGCGTCATCTGGACGGTGATGATTTCTCTGCGGTTATCACCCAGGCGCAACAGATGGCAGGCTTCCCGTACAGCGAAATTCCGCACCTTATCACCGTGGGTTTTGGTCGCCAGACGCTGCTTGGCGCTGCTGATACGCTGATTGATCTGGTGAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTGTGACGGCGCACGCGGCGAGCGCCACTACTTCACCGATTTCGCCACCAGCGTGCCGGATGACTGCCTGATCCTGACCCTCGCCTGTGGTAAATATCGCTTTAACAAACTTGAGTTTGGCGATATCGAAGGTCTGCCGCGTCTGGTAGATGCAGGTCAATGTAACGATGCTTACTCAGCGATTATTCTGGCTGTCACTCTGGCAGAGAAACTGGGCTGCGGTGTCAACGATCTGCCGCTGTCGCTGGTGCTCTCCTGGTTTGAACAGAAAGCGATCGTCATTCTGCTGACGCTGCTTTCTCTGGGCGTGAAAAATATCGTCACCGGCCCGACTGCACCTGGTTTCCTGACACCAGACCTGCTGGCGGTGCTGAACGAGAAATTCGGCCTGCGTTCTATCACCACTGTTGAAGAAGACATGAAGCAACTGTTGAGCGCGTAA", + "dna_sequence_length": 1653, + "functions": [ + "hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases" + ], + "id": "CDS_855", + "location": [ + [ + "NC_000913", + 913814, + "-", + 1653 + ] + ], + "md5": "e2c97e4abc6662b6cee3de9c1d11effe", + "parent_gene": "", + "protein_md5": "97f76dcbb43aa9cfd949ecf15a5341ac", + "protein_translation": "MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA", + "protein_translation_length": 550, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002966" + ], + [ + "gene_synonym", + "ECK0865" + ], + [ + "gene_synonym", + "EcoGene:EG13426" + ], + [ + "gene_synonym", + "GI:90111181" + ], + [ + "gene_synonym", + "GeneID:947142" + ], + [ + "gene_synonym", + "JW0858" + ], + [ + "gene_synonym", + "NP_415395.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75826" + ], + [ + "gene_synonym", + "b0874" + ], + [ + "gene_synonym", + "ybjE" + ] + ], + "dna_sequence": "ATGTTTTCTGGGCTGTTAATCATTCTGGTTCCCCTGATTGTGGGTTACCTCATTCCGCTTCGCCAACAAGCTGCGTTAAAAGTTATTAATCAGCTATTAAGCTGGATGGTTTACCTTATTCTCTTTTTTATGGGTATCAGTCTGGCGTTTCTCGATAACCTCGCCAGTAACCTGTTGGCGATTCTGCATTATTCTGCCGTCAGTATTACCGTTATTTTACTGTGTAATATTGCCGCCCTGATGTGGCTGGAGCGAGGCCTGCCGTGGCGCAACCACCATCAGCAAGAAAAACTCCCGTCGCGTATTGCGATGGCGCTGGAGTCGCTAAAACTGTGCGGCGTAGTAGTGATTGGTTTTGCCATTGGTCTAAGTGGACTGGCTTTCTTACAACACGCGACCGAAGCCAGTGAATACACGTTAATTTTGCTACTTTTCCTCGTTGGTATTCAGTTGCGCAATAATGGCATGACCTTAAAGCAGATTGTCCTTAATCGCCGGGGAATGATTGTCGCCGTGGTGGTGGTTGTCAGTTCATTAATTGGTGGTTTAATTAACGCCTTTATTCTTGATCTCCCCATCAATACCGCGCTGGCAATGGCCTCCGGTTTCGGCTGGTATTCTCTTTCCGGTATTTTATTGACCGAATCTTTTGGTCCGGTAATCGGGAGCGCGGCGTTTTTTAATGATCTGGCCCGTGAACTGATTGCTATTATGTTGATCCCTGGGCTGATTCGCCGCAGCCGCTCTACTGCACTGGGCTTATGCGGTGCCACATCAATGGATTTCACCCTGCCCGTTCTTCAACGTACTGGCGGGCTGGATATGGTCCCGGCGGCAATTGTTCACGGTTTTATTCTTAGCCTGTTAGTGCCGATCCTCATCGCCTTTTTCTCTGCGTAA", + "dna_sequence_length": 900, + "functions": [ + "putative transporter" + ], + "id": "CDS_856", + "location": [ + [ + "NC_000913", + 914857, + "-", + 900 + ] + ], + "md5": "c51c4a47e51377eeae286ad010e5f4ce", + "parent_gene": "", + "protein_md5": "4b7a3f51272ca18bde25fb5620f014f3", + "protein_translation": "MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002976" + ], + [ + "gene_synonym", + "ECK0866" + ], + [ + "gene_synonym", + "EcoGene:EG13270" + ], + [ + "gene_synonym", + "GI:16128843" + ], + [ + "gene_synonym", + "GeneID:945497" + ], + [ + "gene_synonym", + "JW0859" + ], + [ + "gene_synonym", + "NP_415396.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60844" + ], + [ + "gene_synonym", + "aqpZ" + ], + [ + "gene_synonym", + "b0875" + ], + [ + "gene_synonym", + "bniP" + ] + ], + "dna_sequence": "ATGTTCAGAAAATTAGCAGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGTGGTAGTGCTGTACTGGCCGCAGGCTTCCCGGAATTAGGCATTGGTTTTGCCGGCGTGGCGTTGGCGTTCGGTCTGACCGTTCTGACGATGGCCTTTGCTGTTGGTCATATTTCTGGTGGTCATTTTAACCCGGCGGTCACTATTGGTTTATGGGCTGGCGGACGTTTTCCGGCAAAAGAAGTCGTTGGCTACGTAATTGCCCAGGTTGTCGGCGGTATTGTTGCAGCGGCGCTGCTGTATTTAATTGCCAGTGGTAAAACGGGTTTTGACGCGGCAGCCAGCGGTTTTGCTTCTAACGGTTATGGCGAGCATTCACCAGGCGGTTATTCCATGCTTTCCGCGCTGGTAGTTGAACTGGTATTGAGTGCAGGTTTCCTGTTGGTGATCCACGGCGCAACCGACAAATTCGCGCCGGCAGGTTTTGCGCCGATCGCTATTGGTCTGGCCTTAACCCTGATTCACTTAATTAGTATTCCGGTGACTAACACTTCTGTTAACCCGGCGCGCAGCACCGCGGTTGCTATCTTCCAGGGCGGCTGGGCATTAGAACAACTGTGGTTCTTCTGGGTGGTGCCAATTGTCGGCGGCATTATCGGTGGTCTGATTTACCGGACCCTGCTGGAAAAGCGTGATTAA", + "dna_sequence_length": 696, + "functions": [ + "aquaporin Z" + ], + "id": "CDS_857", + "location": [ + [ + "NC_000913", + 916047, + "-", + 696 + ] + ], + "md5": "6f183158a51f4975629178e55813282e", + "parent_gene": "", + "protein_md5": "29786e341a0244c771452f53e29cfce5", + "protein_translation": "MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002980" + ], + [ + "gene_synonym", + "ECK0867" + ], + [ + "gene_synonym", + "EcoGene:EG13425" + ], + [ + "gene_synonym", + "GI:16128844" + ], + [ + "gene_synonym", + "GeneID:945498" + ], + [ + "gene_synonym", + "JW0860" + ], + [ + "gene_synonym", + "NP_415397.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75828" + ], + [ + "gene_synonym", + "b0876" + ], + [ + "gene_synonym", + "ybjD" + ] + ], + "dna_sequence": "ATGATTCTTGAGCGCGTTGAAATTGTGGGTTTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAACGCGTGGGGTAAATCCAGCTTGCTGGACGCCTTAACTCTGCTGCTATCGCCAGAATCAGATCTCTACCATTTTGAGCGCGACGATTTCTGGTTCCCGCCGGGAGATATCAACGGGCGAGAACATCATCTGCATATTATTTTGACCTTCCGCGAATCGCTGCCAGGCCGACATCGGGTTCGCCGTTATCGGCCGCTGGAAGCGTGCTGGACGCCATGCACCGATGGCTATCACCGTATTTTTTATCGTCTGGAAGGGGAGAGTGCGGAAGACGGCAGCGTGATGACACTGCGCAGTTTTCTCGATAAAGACGGACATCCGATTGATGTCGAGGATATTAACGATCAGGCACGCCATCTGGTGCGTTTAATGCCGGTGCTGCGCTTGCGTGATGCCCGTTTTATGCGCCGTATTCGTAACGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAAGGCACATTGCGACTGGATAAAGACGCCCGTCCATTGTTGCTGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGCTTTCAGTTGCCTGGCATCTGTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTGGCGCGTCAGTGCGGACATCATTTTGATGCCGAAGGGATCAAGGTCATTGAGTTTGCCCAGTCCGGGCTAAAGCCACTGGTTAAATTTGCCCGCCGAATGGGGATTGAATGGCATGTACTGGTCGATGGCGATGAAGCAGGGAAGAAATATGCCGCTACGGTACGCAGCCTGTTGAATAACGATCGGGAAGCCGAACGAGAACATTTAACGGCGTTACCGGCGCTGGATATGGAACATTTTATGTATCGCCAGGGATTTTCCGATGTGTTCCACCGCATGGCGCAAATCCCGGAAAATGTACCGATGAATCTACGCAAAATTATCTCGAAAGCGATCCATCGCTCTTCCAAACCCGATCTTGCCATTGAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAA", + "dna_sequence_length": 1659, + "functions": [ + "putative OLD family ATP-dependent endonuclease", + "DUF2813 family protein" + ], + "id": "CDS_858", + "location": [ + [ + "NC_000913", + 916473, + "+", + 1659 + ] + ], + "md5": "52ecaaf5724b81d256353e55e50bd5e2", + "parent_gene": "", + "protein_md5": "c638f0eb1591de97e2a5d99f3d012df4", + "protein_translation": "MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD", + "protein_translation_length": 552, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002982" + ], + [ + "gene_synonym", + "ECK0868" + ], + [ + "gene_synonym", + "EcoGene:EG13693" + ], + [ + "gene_synonym", + "GI:16128845" + ], + [ + "gene_synonym", + "GeneID:946025" + ], + [ + "gene_synonym", + "JW0861" + ], + [ + "gene_synonym", + "NP_415398.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75829" + ], + [ + "gene_synonym", + "b0877" + ], + [ + "gene_synonym", + "ybjX" + ] + ], + "dna_sequence": "ATGGTGAAATCGACGCCATGTATAACCATTGATTTCATGAATATGTCGCAGCTAACTGAACGGACCTTTACGCCATCTGAATCTCTCAGCAGCCTGTCACTTTTTCTTAGTCTGGCACGTGGACAGTGTCGGCCGGGTAAATTCTGGCATCGCCGTAGTTTTCGCCAGAAATTTTTGCTGCGCTCGTTGATTATGCCGCGTTTAAGCGTTGAGTGGATGAACGAACTTTCCCACTGGCCTAATCTCAATGTATTGTTAACGCGCCAGCCGCGACTGCCTGTGCGTCTGCATCGCCCTTACCTTGCGGCGAATCTTAGCCGTAAGCAATTGCTGGAGGCGTTACGTTACCATTATGCGTTACTCCGCGAATGTATGTCGGCGGAAGAATTCAGCTTATATTTGAATACCCCCGGGCTGCAACTGGCGAAGCTGGAAGGCAAAAACGGCGAGCAGTTCACGCTTGAGCTGACCATGATGATCTCAATGGATAAAGAAGGTGACAGCACAATCCTGTTCCGCAACAGCGAAGGTATTCCTCTGGCAGAGATCACGTTTACCCTGTGTGAATATCAGGGGAAAAGAACGATGTTTATTGGCGGACTGCAAGGCGCAAAATGGGAAATTCCACATCAGGAAATCCAGAATGCGACGAAAGCCTGCCACGGGCTATTTCCCAAACGCCTCGTGATGGAAGCGGCCTGTCTGTTTGCCCAACGTTTGCAGGTAGAGCAGATTATTGCCGTCAGCAATGAAACGCATATTTACCGCAGCCTGCGTTATCGCGATAAAGAAGGCAAGATCCACGCTGATTACAACGCTTTCTGGGAATCGGTTGGCGGCGTATGTGATGCTGAACGCCATTACCGCCTTCCAGCACAGATAGCACGAAAAGAGATTGCCGAAATCGCCAGTAAAAAACGGGCTGAATACCGTCGGCGCTATGAGATGCTCGACGCTATTCAGCCACAAATGGCCACGATGTTTCGCGGTTAA", + "dna_sequence_length": 993, + "functions": [ + "DUF535 family protein" + ], + "id": "CDS_859", + "location": [ + [ + "NC_000913", + 919120, + "-", + 993 + ] + ], + "md5": "8d6ea3c0ba37a430fa0992ac638663b1", + "parent_gene": "", + "protein_md5": "0faa22a23ece1f6fc9ce2f4c176eb87f", + "protein_translation": "MVKSTPCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002986" + ], + [ + "gene_synonym", + "ECK0869" + ], + [ + "gene_synonym", + "EcoGene:EG13694" + ], + [ + "gene_synonym", + "GI:90111182" + ], + [ + "gene_synonym", + "GeneID:947322" + ], + [ + "gene_synonym", + "JW0862" + ], + [ + "gene_synonym", + "NP_415399.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75830" + ], + [ + "gene_synonym", + "b0878" + ], + [ + "gene_synonym", + "macA" + ], + [ + "gene_synonym", + "ybjY" + ] + ], + "dna_sequence": "ATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTCTTAACGCACCCGTGCCGACTTATCAGACGCTGATTGTGCGCCCCGGTGATTTACAGCAAAGCGTGCTGGCGACCGGAAAGCTGGACGCGCTGCGTAAGGTTGATGTGGGCGCGCAGGTCAGCGGTCAGTTGAAAACTCTGTCGGTGGCGATTGGCGATAAAGTAAAAAAAGACCAGCTTTTAGGGGTTATTGATCCTGAACAGGCTGAAAACCAGATTAAGGAGGTCGAAGCAACGCTGATGGAGCTACGTGCGCAGCGGCAGCAGGCGGAAGCGGAGCTGAAACTGGCGCGGGTGACGTATTCCCGTCAGCAACGTCTGGCACAAACGAAGGCTGTTTCACAGCAGGATCTCGACACCGCCGCGACGGAGATGGCTGTGAAACAGGCGCAAATTGGCACCATTGACGCGCAAATCAAGCGCAATCAGGCTTCTCTCGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGCCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGTTTCTGAAGCGGATGTAATCCACCTGAAGCCGGGGCAAAAAGCCTGGTTTACGGTGCTTGGCGATCCACTGACGCGCTACGAGGGGCAAATCAAGGATGTACTACCGACGCCGGAAAAGGTTAACGACGCTATTTTCTATTACGCCCGTTTTGAAGTCCCCAACCCCAATGGTTTGCTGCGGCTGGATATGACTGCGCAAGTGCATATTCAGCTCACCGATGTGAAAAATGTGCTGACGATCCCTCTGTCGGCGTTAGGCGATCCGGTTGGCGATAATCGTTATAAAGTCAAATTGTTGCGTAATGGTGAAACACGCGAGCGTGAAGTGACGATTGGCGCACGTAACGATACCGATGTTGAGATTGTCAAAGGGCTTGAAGCGGGCGATGAAGTGGTGATTGGTGAGGCCAAACCAGGAGCTGCACAATGA", + "dna_sequence_length": 1116, + "functions": [ + "macrolide transporter membrane fusion protein (MFP) component" + ], + "id": "CDS_860", + "location": [ + [ + "NC_000913", + 919235, + "+", + 1116 + ] + ], + "md5": "43f35ae918141e43c1f8bd0a7960ad80", + "parent_gene": "", + "protein_md5": "818289fe750ff8acad8606672e58ca13", + "protein_translation": "MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ", + "protein_translation_length": 371, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002989" + ], + [ + "gene_synonym", + "ECK0870" + ], + [ + "gene_synonym", + "EcoGene:EG13695" + ], + [ + "gene_synonym", + "GI:16128847" + ], + [ + "gene_synonym", + "GeneID:945164" + ], + [ + "gene_synonym", + "JW0863" + ], + [ + "gene_synonym", + "NP_415400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75831" + ], + [ + "gene_synonym", + "b0879" + ], + [ + "gene_synonym", + "macB" + ], + [ + "gene_synonym", + "ybjZ" + ] + ], + "dna_sequence": "ATGACGCCTTTGCTCGAATTAAAGGATATTCGTCGCAGCTATCCTGCCGGTGATGAGCAGGTTGAGGTGCTGAAGGGCATCAGCCTCGATATTTATGCGGGTGAGATGGTCGCGATTGTTGGCGCTTCGGGTTCCGGTAAATCGACCCTGATGAATATTCTCGGCTGTCTGGATAAGGCCACCAGCGGCACCTATCGCGTCGCCGGTCAGGATGTTGCCACGCTGGACGCCGATGCGCTGGCGCAACTGCGCCGCGAGCATTTCGGCTTTATTTTCCAGCGTTACCATTTGCTTTCGCATTTAACCGCCGAGCAGAACGTTGAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATCCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCCAAACAAATGGTGCTGGCGGATATTCGTTCTATTGGTACGAATACTATTGATGTCTATCCCGGGAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATAACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTTCTCGACAGTAATACTCGCCGCCAGCTTTTCCCCCATAAAGCAGATGTGGTTGGCGAGGTGATTCTGGTCGGCAATATGCCCGCCAGAGTCATTGGTGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCCACGGAAAGAAGGATTTCTTTACCTGGAACATGGACGGCGTCTTGAAAACTGTTGAAAAGACCACACGTACTTTACAACTGTTTCTGACGCTGGTGGCGGTGATTTCGCTGGTGGTGGGCGGTATTGGTGTAATGAATATTATGCTGGTGTCAGTGACCGAGCGGACGCGGGAAATTGGCATTCGCATGGCTGTAGGTGCGCGAGCAAGCGATGTTTTGCAACAGTTCCTGATCGAAGCCGTACTGGTTTGCCTGGTCGGTGGCGCGTTGGGAATAACACTGTCACTGTTAATTGCTTTCACCTTGCAGCTTTTCTTACCCGGCTGGGAGATTGGTTTTTCACCGTTGGCGCTGCTGCTGGCGTTTCTCTGCTCGACGGTCACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAA", + "dna_sequence_length": 1947, + "functions": [ + "macrolide ABC transporter peremase/ATPase" + ], + "id": "CDS_861", + "location": [ + [ + "NC_000913", + 920347, + "+", + 1947 + ] + ], + "md5": "640a026c83127d59dfcda81167c36939", + "parent_gene": "", + "protein_md5": "0e5f444e5b1ca30691342a1817857003", + "protein_translation": "MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVTGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE", + "protein_translation_length": 648, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002991" + ], + [ + "gene_synonym", + "ECK0871" + ], + [ + "gene_synonym", + "EcoGene:EG11111" + ], + [ + "gene_synonym", + "GI:16128848" + ], + [ + "gene_synonym", + "GeneID:945669" + ], + [ + "gene_synonym", + "JW0864" + ], + [ + "gene_synonym", + "NP_415401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A968" + ], + [ + "gene_synonym", + "b0880" + ], + [ + "gene_synonym", + "cspD" + ], + [ + "gene_synonym", + "cspH" + ], + [ + "gene_synonym", + "ybjA" + ] + ], + "dna_sequence": "ATGGAAAAGGGTACTGTTAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAAGATATTTTCGCTCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCTGGACAATCCGTTCAGTTTGATGTCCACCAGGGGCCAAAAGGCAATCACGCCAGTGTTATTGTGCCCGTCGAAGTAGAAGCGGCAGTCGCATAG", + "dna_sequence_length": 225, + "functions": [ + "inhibitor of DNA replication, cold shock protein homolog" + ], + "id": "CDS_862", + "location": [ + [ + "NC_000913", + 922590, + "-", + 225 + ] + ], + "md5": "b12368a14dbc4f40c027df3b8d7c0584", + "parent_gene": "", + "protein_md5": "2af9790425e583c73e4c4e65cf6a70d1", + "protein_translation": "MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA", + "protein_translation_length": 74, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002998" + ], + [ + "gene_synonym", + "ECK0872" + ], + [ + "gene_synonym", + "EcoGene:EG14241" + ], + [ + "gene_synonym", + "GI:16128849" + ], + [ + "gene_synonym", + "GeneID:948443" + ], + [ + "gene_synonym", + "JW0865" + ], + [ + "gene_synonym", + "NP_415402.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Q6" + ], + [ + "gene_synonym", + "b0881" + ], + [ + "gene_synonym", + "clpS" + ], + [ + "gene_synonym", + "yljA" + ] + ], + "dna_sequence": "ATGGGTAAAACGAACGACTGGCTGGACTTTGATCAACTGGCGGAAGAAAAAGTTCGCGACGCGCTAAAACCGCCATCTATGTATAAAGTGATATTAGTCAATGATGATTACACTCCGATGGAGTTTGTTATTGACGTGTTACAAAAATTCTTTTCTTATGATGTAGAACGTGCAACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGA", + "dna_sequence_length": 321, + "functions": [ + "regulatory protein for ClpA substrate specificity" + ], + "id": "CDS_863", + "location": [ + [ + "NC_000913", + 922913, + "+", + 321 + ] + ], + "md5": "201a29b44d4cf745c6de3ac41c0673b9", + "parent_gene": "", + "protein_md5": "3cfca27767229b6aaa0738a6149bd45a", + "protein_translation": "MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003001" + ], + [ + "gene_synonym", + "ECK0873" + ], + [ + "gene_synonym", + "EcoGene:EG10156" + ], + [ + "gene_synonym", + "GI:16128850" + ], + [ + "gene_synonym", + "GeneID:945764" + ], + [ + "gene_synonym", + "JW0866" + ], + [ + "gene_synonym", + "NP_415403.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH9" + ], + [ + "gene_synonym", + "b0882" + ], + [ + "gene_synonym", + "clpA" + ], + [ + "gene_synonym", + "lopD" + ] + ], + "dna_sequence": "ATGCTCAATCAAGAACTGGAACTCAGTTTAAATATGGCTTTCGCCAGAGCGCGCGAGCACCGTCATGAGTTTATGACCGTCGAGCACTTGTTACTGGCGCTGCTCAGTAACCCATCTGCCCGGGAGGCGCTGGAAGCGTGTTCTGTGGATTTGGTTGCGCTCCGTCAGGAACTGGAAGCCTTTATTGAACAAACCACACCCGTTCTGCCTGCCAGTGAAGAGGAGCGCGACACACAGCCGACGCTGAGTTTTCAGCGTGTACTGCAACGTGCGGTCTTCCATGTCCAGTCCTCCGGTCGCAATGAGGTTACCGGTGCAAACGTTCTGGTCGCTATCTTTAGCGAACAGGAGTCGCAGGCGGCATATCTGTTGCGTAAACATGAAGTCAGCCGTCTCGATGTGGTGAACTTTATCTCTCATGGCACGCGTAAAGACGAGCCGACACAGTCTTCTGATCCTGGCAGCCAGCCAAACAGCGAAGAACAAGCTGGTGGGGAGGAACGTATGGAGAATTTCACGACGAACCTGAATCAGCTTGCGCGCGTGGGCGGAATCGACCCACTGATTGGTCGTGAGAAGGAGCTGGAGCGTGCTATTCAGGTTCTCTGCCGTCGCCGTAAAAACAACCCGCTGCTGGTGGGGGAATCTGGTGTCGGTAAAACCGCGATTGCGGAAGGTCTTGCCTGGCGAATTGTTCAGGGCGATGTGCCGGAAGTGATGGCTGACTGTACGATTTACTCTCTCGATATCGGTTCTCTGTTAGCGGGCACAAAATATCGCGGCGACTTTGAAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCACACCATTATCGGTGCGGGTGCAGCGTCTGGTGGTCAGGTCGATGCGGCTAACCTAATCAAACCGTTGCTCTCCAGCGGTAAAATTCGTGTAATTGGTTCGACAACCTATCAGGAGTTCAGCAACATTTTCGAGAAAGACCGTGCTCTGGCGCGTCGCTTCCAGAAAATTGATATTACTGAACCGTCGATCGAAGAAACTGTTCAAATCATCAATGGCCTGAAACCGAAGTATGAAGCGCACCACGACGTGCGTTATACCGCAAAAGCGGTGCGTGCGGCGGTAGAGCTGGCGGTGAAATACATTAACGATCGTCATCTGCCGGATAAAGCCATTGATGTTATCGACGAAGCGGGCGCTCGCGCACGCCTGATGCCGGTAAGCAAACGCAAGAAAACCGTTAATGTGGCGGATATTGAGTCCGTGGTGGCCCGTATTGCACGCATTCCAGAGAAGAGTGTTTCTCAGAGTGATCGTGATACCCTGAAAAACCTCGGCGATCGCTTGAAAATGCTGGTCTTCGGTCAGGATAAAGCCATTGAGGCGCTGACTGAAGCCATTAAGATGGCGCGTGCAGGTTTAGGTCACGAACATAAACCGGTTGGTTCGTTCCTGTTTGCCGGCCCTACCGGGGTCGGGAAAACAGAGGTGACGGTACAGCTTTCGAAAGCTTTGGGCATTGAGCTTCTGCGCTTTGATATGTCCGAGTATATGGAACGCCATACCGTCAGCCGTCTTATTGGTGCGCCTCCGGGATACGTTGGTTTTGATCAGGGCGGTTTGCTGACTGATGCGGTCATCAAGCATCCACATGCGGTGCTGCTGCTGGACGAAATCGAGAAAGCGCACCCGGACGTGTTCAATATTCTGTTGCAGGTGATGGATAACGGTACGCTGACCGATAACAACGGACGCAAAGCAGACTTCCGTAACGTGGTGCTGGTGATGACCACCAACGCCGGGGTACGGGAAACTGAGCGCAAATCCATTGGTCTTATCCACCAGGATAACAGCACCGATGCGATGGAAGAGATCAAGAAGATCTTTACACCGGAATTCCGTAACCGTCTCGACAACATTATCTGGTTTGATCATCTGTCAACCGACGTGATCCATCAGGTGGTGGATAAATTCATCGTCGAGTTGCAGGTTCAGCTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAA", + "dna_sequence_length": 2277, + "functions": [ + "ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity" + ], + "id": "CDS_864", + "location": [ + [ + "NC_000913", + 923264, + "+", + 2277 + ] + ], + "md5": "b3c32ba3787968c578f76b7c0f199604", + "parent_gene": "", + "protein_md5": "a32c23cc0d6ccbb5e17f484494775219", + "protein_translation": "MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH", + "protein_translation_length": 758, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003005" + ], + [ + "gene_synonym", + "ECK0875" + ], + [ + "gene_synonym", + "EcoGene:EG10504" + ], + [ + "gene_synonym", + "GI:16128851" + ], + [ + "gene_synonym", + "GeneID:945500" + ], + [ + "gene_synonym", + "JW0867" + ], + [ + "gene_synonym", + "NP_415404.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69222" + ], + [ + "gene_synonym", + "b0884" + ], + [ + "gene_synonym", + "bypA1" + ], + [ + "gene_synonym", + "infA" + ] + ], + "dna_sequence": "ATGGCCAAAGAAGACAATATTGAAATGCAAGGTACCGTTCTTGAAACGTTGCCTAATACCATGTTCCGCGTAGAGTTAGAAAACGGTCACGTGGTTACTGCACACATCTCCGGTAAAATGCGCAAAAACTACATCCGCATCCTGACGGGCGACAAAGTGACTGTTGAACTGACCCCGTACGACCTGAGCAAAGGCCGCATTGTCTTCCGTAGTCGCTGA", + "dna_sequence_length": 219, + "functions": [ + "translation initiation factor IF-1" + ], + "id": "CDS_865", + "location": [ + [ + "NC_000913", + 926443, + "-", + 219 + ] + ], + "md5": "ce54b86133436b3b1a5f9b38a3adbf6d", + "parent_gene": "", + "protein_md5": "7685e403ced062aa096db5195bf558e7", + "protein_translation": "MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003009" + ], + [ + "gene_synonym", + "ECK0876" + ], + [ + "gene_synonym", + "EcoGene:EG11112" + ], + [ + "gene_synonym", + "GI:16128852" + ], + [ + "gene_synonym", + "GeneID:945490" + ], + [ + "gene_synonym", + "JW0868" + ], + [ + "gene_synonym", + "NP_415405.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8P1" + ], + [ + "gene_synonym", + "aat" + ], + [ + "gene_synonym", + "b0885" + ], + [ + "gene_synonym", + "ycaA" + ] + ], + "dna_sequence": "ATGCGCCTGGTTCAGCTTTCTCGCCATTCAATAGCCTTCCCTTCCCCGGAAGGCGCATTACGTGAGCCTAACGGCCTGCTGGCACTTGGGGGCGATCTTAGCCCTGCGCGCCTGTTAATGGCTTACCAGCGTGGTATTTTTCCGTGGTTTTCTCCAGGCGACCCCATCCTCTGGTGGTCGCCCGATCCCCGCGCGGTGCTATGGCCAGAATCACTGCATATCAGCCGTAGTATGAAGCGATTTCATAAACGCTCGCCCTATCGTGTCACGATGAATTACGCTTTTGGTCAGGTCATTGAAGGCTGTGCCAGCGATCGCGAAGAAGGAACCTGGATCACGCGTGGCGTGGTCGAAGCCTACCATCGCCTTCACGAACTCGGCCATGCCCACTCCATTGAAGTCTGGCGTGAAGATGAGCTTGTCGGCGGTATGTACGGCGTGGCCCAGGGAACGCTATTTTGTGGCGAGTCCATGTTCAGCCGGATGGAAAATGCGTCTAAAACGGCGCTTCTGGTATTCTGTGAGGAATTTATCGGTCATGGCGGTAAGCTTATCGACTGCCAGGTCCTTAACGATCACACAGCATCGCTTGGTGCCTGCGAAATTCCCCGCCGGGATTACCTTAATTATCTCAATCAAATGCGCCTCGGACGATTGCCGAATAATTTCTGGGTACCACGATGCTTGTTTTCACCACAAGAATGA", + "dna_sequence_length": 705, + "functions": [ + "leucyl/phenylalanyl-tRNA-protein transferase" + ], + "id": "CDS_866", + "location": [ + [ + "NC_000913", + 927432, + "-", + 705 + ] + ], + "md5": "0badf82bbe5fad7de52aabb876b8e77f", + "parent_gene": "", + "protein_md5": "2457f4abafd37feb90a801064461ee69", + "protein_translation": "MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003012" + ], + [ + "gene_synonym", + "ECK0877" + ], + [ + "gene_synonym", + "EcoGene:EG10012" + ], + [ + "gene_synonym", + "GI:16128853" + ], + [ + "gene_synonym", + "GeneID:945504" + ], + [ + "gene_synonym", + "JW0869" + ], + [ + "gene_synonym", + "NP_415406.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23886" + ], + [ + "gene_synonym", + "b0886" + ], + [ + "gene_synonym", + "cydC" + ], + [ + "gene_synonym", + "mdrA" + ], + [ + "gene_synonym", + "mdrH" + ], + [ + "gene_synonym", + "surB" + ], + [ + "gene_synonym", + "ycaB" + ] + ], + "dna_sequence": "ATGCGCGCTTTGCTACCCTATCTGGCACTGTATAAACGTCATAAATGGATGTTAAGTCTTGGTATTGTGCTGGCAATTGTGACGCTGCTCGCCAGTATCGGTCTGTTGACACTTTCCGGCTGGTTCCTCTCGGCCTCAGCGGTTGCGGGGGTTGCCGGACTGTACAGCTTCAACTATATGCTACCCGCTGCGGGCGTGCGTGGCGCAGCAATCACCCGTACTGCCGGGCGCTATTTTGAACGTCTGGTAAGTCACGACGCGACTTTCCGCGTGTTGCAGCATCTGCGCATTTACACCTTCAGCAAATTGCTGCCCCTCTCCCCTGCCGGACTGGCGCGCTATCGTCAGGGCGAATTGCTCAATCGCGTGGTGGCGGATGTTGATACGCTCGATCATCTTTACCTGCGCGTTATCTCGCCGCTGGTGGGCGCTTTTGTGGTGATTATGGTGGTGACAATCGGGTTAAGTTTCCTTGATTTCACCCTCGCCTTTACGCTGGGCGGCATTATGTTACTGACGCTTTTCCTGATGCCACCGCTGTTTTATCGTGCGGGAAAAAGCACCGGGCAAAATCTGACTCATCTTCGCGGACAGTATCGCCAACAACTGACGGCCTGGCTGCAAGGGCAAGCTGAGCTGACCATTTTTGGTGCCAGCGATCGTTATCGCACGCAACTAGAGAATACAGAAATTCAATGGCTGGAAGCGCAACGCCGTCAATCTGAACTGACCGCATTGTCGCAAGCGATAATGCTGCTCATTGGCGCGTTAGCGGTGATCCTGATGCTGTGGATGGCGTCTGGCGGCGTTGGCGGCAATGCTCAACCCGGCGCGTTAATTGCCCTGTTTGTCTTCTGCGCGTTAGCCGCGTTTGAAGCACTGGCACCAGTAACGGGTGCATTTCAGCATCTGGGGCAAGTCATTGCCTCTGCCGTACGTATCTCTGACTTAACGGATCAAAAACCGGAGGTCACCTTTCCTGATACCCAAACTCGTGTTGCCGATCGCGTTTCGCTGACGTTACGGGATGTTCAGTTCACTTATCCGGAGCAATCTCAACAGGCACTTAAAGGGATTTCTCTTCAGGTAAACGCCGGGGAACATATAGCGATTCTCGGGCGAACCGGATGCGGCAAATCAACACTGTTACAACAGCTGACCCGCGCATGGGACCCGCAACAGGGCGAGATTTTGCTTAACGATAGCCCCATAGCCAGCCTGAATGAAGCGGCTCTACGACAGACCATCAGCGTTGTTCCTCAGCGAGTGCATCTGTTTAGCGCCACGCTGCGTGATAATCTTTTACTCGCCTCGCCTGGCAGTAGTGATGAGGCTCTGTCGGAGATCTTGCGTCGCGTTGGCCTGGAAAAGCTGCTCGAGGATGCAGGTCTCAACAGTTGGTTAGGTGAAGGCGGACGCCAGCTCTCCGGTGGTGAACTGCGCCGTCTGGCTATCGCCCGTGCGCTGTTACATGATGCGCCACTGGTGTTGCTGGATGAACCTACCGAAGGCTTAGATGCCACAACCGAAAGCCAGATCCTTGAATTGCTTGCAGAAATGATGCGTGAGAAAACGGTGTTAATGGTCACCCATCGACTTCGCGGACTCTCTCGTTTCCAACAAATAATAGTGATGGACAACGGGCAAATTATTGAGCAAGGTACTCACGCAGAACTGCTTGCCAGACAGGGGCGTTATTACCAGTTCAAGCAGGGTTTGTAA", + "dna_sequence_length": 1722, + "functions": [ + "glutathione/cysteine ABC transporter export permease/ATPase" + ], + "id": "CDS_867", + "location": [ + [ + "NC_000913", + 929195, + "-", + 1722 + ] + ], + "md5": "8a403fee3256aa48ea4628befb8b73de", + "parent_gene": "", + "protein_md5": "492d0e2674ccb8be52474c262f1d3c65", + "protein_translation": "MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL", + "protein_translation_length": 573, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003015" + ], + [ + "gene_synonym", + "ECK0878" + ], + [ + "gene_synonym", + "EcoGene:EG11405" + ], + [ + "gene_synonym", + "GI:16128854" + ], + [ + "gene_synonym", + "GeneID:949052" + ], + [ + "gene_synonym", + "JW0870" + ], + [ + "gene_synonym", + "NP_415407.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29018" + ], + [ + "gene_synonym", + "b0887" + ], + [ + "gene_synonym", + "cydD" + ], + [ + "gene_synonym", + "htrD" + ] + ], + "dna_sequence": "ATGAATAAATCTCGTCAAAAAGAGTTAACCCGCTGGTTAAAACAGCAAAGCGTCATCTCCCAACGTTGGCTGAATATTTCTCGTCTGCTGGGCTTTGTGAGCGGCATATTGATCATTGCCCAGGCCTGGTTCATGGCGCGAATTCTGCAACATATGATTATGGAGAATATTCCCCGTGAAGCCCTGCTGCTTCCCTTTACGTTACTGGTTCTGACCTTTGTACTGCGCGCATGGGTGGTCTGGTTACGCGAACGGGTGGGTTATCACGCCGGGCAGCATATCCGCTTTGCCATCCGCCGTCAGGTTCTCGACCGTCTGCAACAAGCAGGGCCAGCGTGGATTCAGGGTAAACCTGCGGGGAGCTGGGCGACGCTGGTACTCGAGCAAATTGACGATATGCATGATTACTATGCACGCTATCTGCCGCAAATGGCGCTGGCAGTGTCGGTGCCGTTGCTGATTGTGGTGGCAATCTTCCCCTCTAACTGGGCTGCGGCGCTCATTCTGCTGGGCACTGCACCGTTAATTCCGTTGTTTATGGCGCTGGTTGGAATGGGGGCTGCCGATGCTAACCGACGTAACTTTCTCGCTCTTGCTCGCTTAAGTGGGCATTTCCTCGATCGCCTGCGCGGCATGGAAACATTGCGTATTTTTGGTCGTGGTGAAGCTGAAATTGAAAGTATTCGTTCTGCTTCGGAAGATTTCCGCCAACGGACAATGGAAGTGCTACGGCTGGCGTTTTTATCCTCCGGCATTCTCGAATTTTTTACCTCGCTGTCAATTGCTCTGGTGGCGGTCTACTTTGGTTTTTCCTATCTCGGCGAGCTGGATTTTGGTCACTACGATACCGGTGTGACGCTGGCTGCGGGTTTTCTGGCCCTGATCCTTGCGCCAGAGTTTTTCCAGCCATTACGCGATCTCGGTACGTTTTATCATGCTAAAGCCCAGGCTGTTGGCGCAGCTGACAGTCTGAAAACGTTTATGGAAACCCCGCTCGCCCATCCGCAACGTGGTGAGGCGGAATTAGCATCGACCGATCCGGTGACCATTGAGGCCGAGGAGCTGTTTATCACGTCGCCGGAAGGTAAAACGCTGGCCGGACCGCTGAACTTTACTTTGCCAGCAGGCCAACGTGCGGTGTTGGTTGGTCGCAGCGGTTCAGGTAAAAGCTCACTGCTGAACGCGCTTTCTGGTTTTCTCTCATATCAGGGATCGCTACGAATCAACGGGATAGAATTACGCGATTTATCACCAGAATCATGGCGTAAACATCTCTCCTGGGTTGGGCAAAACCCACAATTACCGGCAGCAACATTGCGGGATAACGTACTACTGGCGCGACCTGATGCCAGCGAACAAGAATTACAAGCAGCGCTGGATAACGCCTGGGTCAGCGAGTTTCTACCGCTCCTCCCACAAGGCGTTGATACGCCTGTTGGCGACCAGGCTGCCCGCCTTTCCGTGGGGCAGGCGCAGCGCGTGGCGGTGGCCCGTGCGTTACTAAATCCCTGTTCGCTATTACTGTTGGATGAACCCGCTGCCAGCCTTGATGCTCACAGTGAACAGCGCGTAATGGAGGCGCTGAATGCCGCCTCTCTGCGCCAGACAACGTTAATGGTCACCCACCAGTTAGAAGATCTTGCTGACTGGGATGTCATTTGGGTTATGCAGGATGGCCGGATTATTGAGCAAGGACGTTACGCGGAATTAAGTGTGGCTGGTGGCCCATTCGCCACATTACTGGCCCATCGTCAGGAGGAGATTTAA", + "dna_sequence_length": 1767, + "functions": [ + "glutathione/cysteine ABC transporter export permease/ATPase" + ], + "id": "CDS_868", + "location": [ + [ + "NC_000913", + 930962, + "-", + 1767 + ] + ], + "md5": "52457b10b6ae3f8947fd4164bd2d0a9e", + "parent_gene": "", + "protein_md5": "df65ab2011f88cc9a75f06f6b7875994", + "protein_translation": "MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEELFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI", + "protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003018" + ], + [ + "gene_synonym", + "ECK0879" + ], + [ + "gene_synonym", + "EcoGene:EG11032" + ], + [ + "gene_synonym", + "GI:16128855" + ], + [ + "gene_synonym", + "GeneID:949054" + ], + [ + "gene_synonym", + "JW0871" + ], + [ + "gene_synonym", + "NP_415408.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9P4" + ], + [ + "gene_synonym", + "b0888" + ], + [ + "gene_synonym", + "trxB" + ] + ], + "dna_sequence": "ATGGGCACGACCAAACACAGTAAACTGCTTATCCTGGGTTCAGGCCCGGCGGGATACACCGCTGCTGTCTACGCGGCGCGCGCCAACCTGCAACCTGTGCTGATTACCGGCATGGAAAAAGGCGGCCAACTGACCACCACCACGGAAGTGGAAAACTGGCCTGGCGATCCAAACGATCTGACCGGTCCGTTATTAATGGAGCGCATGCACGAACATGCCACCAAGTTTGAAACTGAGATCATTTTTGATCATATCAACAAGGTGGATCTGCAAAACCGTCCGTTCCGTCTGAATGGCGATAACGGCGAATACACTTGCGACGCGCTGATTATTGCCACCGGAGCTTCTGCACGCTATCTCGGCCTGCCCTCTGAAGAAGCCTTTAAAGGCCGTGGGGTTTCTGCTTGTGCAACCTGCGACGGTTTCTTCTATCGCAACCAGAAAGTTGCGGTCATCGGCGGCGGCAATACCGCGGTTGAAGAGGCGCTGTATCTGTCTAACATCGCTTCGGAAGTGCATCTGATTCACCGCCGTGACGGTTTCCGCGCGGAAAAAATCCTCATTAAGCGCCTGATGGATAAAGTGGAGAACGGCAACATCATTCTGCACACCAACCGTACGCTGGAAGAAGTGACCGGCGATCAAATGGGTGTCACTGGCGTTCGTCTGCGCGATACGCAAAACAGCGATAACATCGAGTCACTCGACGTTGCCGGTCTGTTTGTTGCTATCGGTCACAGCCCGAATACTGCGATTTTCGAAGGGCAGCTGGAACTGGAAAACGGCTACATCAAAGTACAGTCGGGTATTCATGGTAATGCCACCCAGACCAGCATTCCTGGCGTCTTTGCCGCAGGCGACGTGATGGATCACATTTATCGCCAGGCCATTACTTCGGCCGGTACAGGCTGCATGGCAGCACTTGATGCGGAACGCTACCTCGATGGTTTAGCTGACGCAAAATAA", + "dna_sequence_length": 966, + "functions": [ + "thioredoxin reductase, FAD/NAD(P)-binding" + ], + "id": "CDS_869", + "location": [ + [ + "NC_000913", + 932050, + "-", + 966 + ] + ], + "md5": "58e72ce2e3b730129509d00d71dd0b9a", + "parent_gene": "", + "protein_md5": "7adccd89b1dd7e60f54a814b65b92b41", + "protein_translation": "MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003023" + ], + [ + "gene_synonym", + "ECK0880" + ], + [ + "gene_synonym", + "EcoGene:EG10547" + ], + [ + "gene_synonym", + "GI:16128856" + ], + [ + "gene_synonym", + "GeneID:949051" + ], + [ + "gene_synonym", + "JW0872" + ], + [ + "gene_synonym", + "NP_415409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACJ0" + ], + [ + "gene_synonym", + "alsB" + ], + [ + "gene_synonym", + "b0889" + ], + [ + "gene_synonym", + "ihb" + ], + [ + "gene_synonym", + "livR" + ], + [ + "gene_synonym", + "lrp" + ], + [ + "gene_synonym", + "lrs" + ], + [ + "gene_synonym", + "lss" + ], + [ + "gene_synonym", + "lstR" + ], + [ + "gene_synonym", + "mbf" + ], + [ + "gene_synonym", + "oppI" + ], + [ + "gene_synonym", + "rblA" + ] + ], + "dna_sequence": "ATGGTAGATAGCAAGAAGCGCCCTGGCAAAGATCTCGACCGTATCGATCGTAACATTCTTAATGAGTTGCAAAAGGATGGGCGTATTTCTAACGTCGAGCTTTCTAAACGTGTGGGACTTTCCCCAACGCCGTGCCTTGAGCGTGTGCGTCGGCTGGAAAGACAAGGGTTTATTCAGGGCTATACGGCGCTGCTTAACCCCCATTATCTGGATGCATCACTTCTGGTATTCGTTGAGATTACTCTGAATCGTGGCGCACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAA", + "dna_sequence_length": 495, + "functions": [ + "leucine-responsive global transcriptional regulator" + ], + "id": "CDS_870", + "location": [ + [ + "NC_000913", + 932595, + "+", + 495 + ] + ], + "md5": "e9b7482b9202ec5d1d8b46b6af179916", + "parent_gene": "", + "protein_md5": "60feb0dfbdfa96c198c39b45781a4348", + "protein_translation": "MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003027" + ], + [ + "gene_synonym", + "ECK0881" + ], + [ + "gene_synonym", + "EcoGene:EG13226" + ], + [ + "gene_synonym", + "GI:16128857" + ], + [ + "gene_synonym", + "GeneID:945102" + ], + [ + "gene_synonym", + "JW0873" + ], + [ + "gene_synonym", + "NP_415410.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46889" + ], + [ + "gene_synonym", + "b0890" + ], + [ + "gene_synonym", + "dinH" + ], + [ + "gene_synonym", + "ftsK" + ] + ], + "dna_sequence": "TTGAGCCAGGAATACATTGAAGACAAAGAAGTCACATTGACAAAGTTAAGTAGCGGCCGCCGCCTTCTGGAGGCGTTGCTGATCCTTATTGTCCTGTTTGCCGTCTGGTTGATGGCTGCCTTACTAAGCTTTAACCCTTCGGACCCCAGCTGGTCGCAAACGGCCTGGCATGAACCTATCCATAATTTAGGTGGGATGCCCGGTGCGTGGTTGGCAGATACGCTGTTCTTTATTTTTGGCGTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTACCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGCTCTGCGTTTGGGCAGCGGGCCTGACGTTGTTCACCGGTTGGTCATGGGTGACCATTGCTGAAAAACTCGGCGGCTGGATTTTAAACATTCTCACCTTCGCCAGTAATCGTACCCGTCGCGATGATACCTGGGTCGATGAAGATGAGTATGAAGACGACGAAGAGTATGAAGATGAAAATCACGGCAAACAGCATGAATCACGCCGTGCCCGTATTCTTCGCGGCGCGCTAGCGCGTCGTAAACGGTTGGCGGAAAAATTCATTAATCCGATGGGGCGGCAAACAGACGCTGCGTTGTTCTCCGGTAAGCGGATGGATGATGACGAAGAGATTACCTACACTGCACGCGGTGTGGCTGCCGACCCGGACGACGTCCTATTTTCGGGCAATCGTGCAACGCAGCCAGAATATGACGAATACGATCCATTATTAAACGGTGCGCCAATTACCGAACCTGTCGCTGTAGCAGCTGCTGCTACCACGGCGACACAAAGCTGGGCTGCGCCGGTTGAACCTGTGACTCAGACGCCGCCTGTTGCCTCTGTTGATGTTCCACCTGCGCAACCTACAGTAGCCTGGCAGCCTGTACCGGGTCCACAAACGGGAGAGCCGGTTATTGCTCCTGCACCGGAAGGTTACCCACAGCAGTCACAATATGCGCAGCCTGCAGTGCAATATAATGAGCCGCTGCAACAACCAGTACAGCCGCAGCAGCCGTATTATGCACCTGCAGCTGAACAACCTGCGCAACAGCCGTATTATGCCCCTGCGCCAGAACAACCGGTGGCAGGTAACGCCTGGCAAGCCGAAGAGCAGCAATCCACTTTTGCTCCACAGTCTACATACCAGACTGAGCAAACTTATCAGCAGCCAGCCGCTCAGGAGCCGTTGTACCAACAGCCGCAACCCGTTGAACAGCAGCCTGTTGTGGAGCCTGAACCCGTTGTAGAAGAGACAAAACCCGCGCGTCCGCCGCTTTACTACTTTGAAGAAGTTGAAGAGAAGCGAGCCCGTGAACGTGAACAACTTGCGGCCTGGTATCAACCGATTCCAGAACCGGTTAAAGAACCAGAACCGATCAAATCTTCGCTGAAAGCACCTTCTGTTGCAGCAGTACCTCCAGTAGAAGCCGCTGCCGCTGTTTCCCCGCTGGCATCTGGCGTGAAAAAAGCGACACTGGCGACGGGGGCTGCCGCAACCGTTGCCGCGCCAGTCTTCAGTCTGGCAAATAGCGGTGGACCGCGTCCTCAGGTCAAAGAGGGGATTGGTCCGCAGTTGCCACGACCGAAACGTATCCGCGTGCCAACTCGTCGTGAACTGGCGTCTTACGGTATTAAGCTGCCCTCACAGCGTGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCGCTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGGATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCAGCAGCCGCAACAACCGGTTGCGCCGCAGCAGCAGTATCAGCAGCCACAACAGCCAGTTGCGCCACAACCGCAGGATACCCTGCTTCATCCGCTGTTGATGCGTAATGGCGACAGCCGTCCGTTGCATAAACCGACGACGCCGCTGCCTTCTCTGGATTTGCTGACACCGCCGCCGAGCGAAGTGGAGCCGGTAGATACCTTTGCGCTTGAACAAATGGCTCGCCTGGTGGAAGCGCGTCTGGCTGATTTCCGTATTAAAGCCGATGTCGTCAATTACTCTCCGGGGCCGGTTATCACTCGCTTTGAATTGAACCTGGCACCGGGCGTAAAAGCGGCGCGCATTTCTAACTTGTCACGGGACCTTGCCCGTTCACTTTCGACGGTGGCGGTGCGTGTCGTTGAAGTTATTCCTGGCAAACCCTATGTAGGTCTGGAGTTACCGAATAAAAAACGACAAACCGTTTATCTGCGCGAAGTTTTGGATAACGCCAAATTCCGCGATAATCCGTCGCCATTAACCGTGGTGCTGGGTAAAGATATCGCCGGTGAGCCGGTGGTTGCCGATCTGGCGAAAATGCCGCACTTGTTGGTTGCGGGGACTACCGGTTCCGGTAAATCTGTCGGTGTGAACGCGATGATCCTGAGCATGCTTTATAAAGCACAGCCAGAAGATGTGCGTTTCATCATGATCGACCCGAAAATGCTGGAGCTTTCGGTTTATGAAGGCATTCCGCATCTGTTAACGGAAGTCGTTACTGATATGAAAGATGCCGCCAACGCGCTGCGCTGGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGCCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTGCCGCGGGTATCCACCTCGTACTGGCAACTCAGCGTCCATCGGTTGATGTTATTACTGGTCTGATTAAAGCGAATATTCCGACCCGTATCGCCTTTACCGTATCCAGTAAGATTGACTCACGTACCATTCTTGATCAGGCTGGCGCGGAATCACTGCTGGGTATGGGGGATATGCTCTACTCTGGGCCGAACTCCACGTTGCCGGTACGTGTCCATGGTGCTTTTGTTCGCGATCAGGAAGTTCATGCCGTGGTGCAGGACTGGAAAGCGCGTGGTCGCCCACAGTATGTTGATGGCATCACCTCCGACAGCGAAAGCGAAGGTGGTGCGGGTGGTTTCGATGGCGCTGAAGAACTGGATCCGTTGTTCGATCAGGCGGTGCAGTTTGTCACTGAAAAACGCAAAGCGTCAATTTCTGGCGTACAGCGTCAGTTCCGCATTGGTTATAACCGTGCAGCGCGTATTATCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAA", + "dna_sequence_length": 3990, + "functions": [ + "DNA translocase at septal ring sorting daughter chromsomes" + ], + "id": "CDS_871", + "location": [ + [ + "NC_000913", + 933224, + "+", + 3990 + ] + ], + "md5": "5153e617e306151d6ef093a8aa163d74", + "parent_gene": "", + "protein_md5": "6103cdf93f14b929d6123cab89ba5b05", + "protein_translation": "MSQEYIEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD", + "protein_translation_length": 1329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003031" + ], + [ + "gene_synonym", + "ECK0882" + ], + [ + "gene_synonym", + "EcoGene:EG12684" + ], + [ + "gene_synonym", + "GI:145698236" + ], + [ + "gene_synonym", + "GeneID:948989" + ], + [ + "gene_synonym", + "JW0874" + ], + [ + "gene_synonym", + "NP_415411.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61316" + ], + [ + "gene_synonym", + "b0891" + ], + [ + "gene_synonym", + "lolA" + ], + [ + "gene_synonym", + "lplA" + ], + [ + "gene_synonym", + "yzzV" + ] + ], + "dna_sequence": "ATGAAAAAAATTGCCATCACCTGTGCATTACTCTCAAGCTTAGTAGCAAGCAGCGTTTGGGCTGATGCCGCAAGCGATCTGAAAAGCCGCCTGGATAAAGTCAGCAGCTTCCACGCCAGCTTCACACAAAAAGTGACTGACGGTAGCGGCGCGGCGGTGCAGGAAGGTCAGGGCGATCTGTGGGTGAAACGTCCAAACTTATTCAACTGGCATATGACACAACCTGATGAAAGCATTCTGGTTTCTGACGGTAAAACACTGTGGTTCTATAACCCGTTCGTTGAGCAAGCTACGGCAACCTGGCTGAAAGATGCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAG", + "dna_sequence_length": 612, + "functions": [ + "lipoprotein chaperone" + ], + "id": "CDS_872", + "location": [ + [ + "NC_000913", + 937372, + "+", + 612 + ] + ], + "md5": "342dcb8026c7b9e855223803b8f10b48", + "parent_gene": "", + "protein_md5": "abc501f5c77c7a30b01513b7fa11f8ce", + "protein_translation": "MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003034" + ], + [ + "gene_synonym", + "ECK0883" + ], + [ + "gene_synonym", + "EcoGene:EG12690" + ], + [ + "gene_synonym", + "GI:16128859" + ], + [ + "gene_synonym", + "GeneID:945505" + ], + [ + "gene_synonym", + "JW0875" + ], + [ + "gene_synonym", + "NP_415412.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAZ4" + ], + [ + "gene_synonym", + "b0892" + ], + [ + "gene_synonym", + "mgsA" + ], + [ + "gene_synonym", + "rarA" + ], + [ + "gene_synonym", + "ycaJ" + ] + ], + "dna_sequence": "GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGTTCACCGTTTCAACAAAAGCCAGCAGGATGCATTTCTGCCACATATTGAAGACGGCACCATCACTTTTATTGGCGCAACCACTGAAAACCCGTCGTTTGAGCTTAATTCGGCACTGCTTTCCCGTGCCCGTGTCTATCTGTTGAAATCCCTGAGTACAGAGGATATTGAGCAAGTACTAACTCAGGCGATGGAAGACAAAACCCGTGGCTATGGTGGTCAGGATATTGTTCTGCCAGATGAAACACGACGCGCCATTGCTGAACTGGTGAATGGCGACGCGCGCCGGGCGTTAAATACGCTGGAAATGATGGCGGATATGGCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGAACGTAGCGCCCGCTTTGATAACAAAGGCGATCGCTTTTACGATCTGATTTCCGCACTGCATAAGTCGGTACGTGGTAGCGCACCCGATGCGGCGCTGTACTGGTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATGACGTGCCGGTTCATTTGCGTAATGCGCCGACGAAATTAATGAAGGAAATGGGCTACGGGCAGGAATATCGTTACGCTCATGATGAAGCAAACGCTTATGCTGCCGGTGAGGTTTACTTCCCGCCGGAAATAGCACAAACACGCTATTATTTCCCGACAAACAGGGGCCTTGAAGGCAAGATTGGCGAAAAGCTCGCCTGGCTGGCTGAACAGGATCAAAATAGCCCCATAAAACGCTACCGTTAA", + "dna_sequence_length": 1344, + "functions": [ + "recombination intermediate processing DNA-dependent ATPase" + ], + "id": "CDS_873", + "location": [ + [ + "NC_000913", + 937994, + "+", + 1344 + ] + ], + "md5": "f90cea30e07eaff8eb85518ff875600f", + "parent_gene": "", + "protein_md5": "4bdb9995bc0149f0b47c6f6b1c3e1b32", + "protein_translation": "MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003038" + ], + [ + "gene_synonym", + "ECK0884" + ], + [ + "gene_synonym", + "EcoGene:EG10947" + ], + [ + "gene_synonym", + "GI:16128860" + ], + [ + "gene_synonym", + "GeneID:945506" + ], + [ + "gene_synonym", + "JW0876" + ], + [ + "gene_synonym", + "NP_415413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8L1" + ], + [ + "gene_synonym", + "b0893" + ], + [ + "gene_synonym", + "serS" + ] + ], + "dna_sequence": "ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGTAGATAAGCTGGGCGCTCTTGAAGAGCGTCGTAAAGTATTGCAGGTCAAAACGGAAAACCTGCAAGCGGAGCGTAACTCCCGATCGAAATCCATTGGCCAGGCGAAAGCGCGCGGGGAAGATATCGAGCCTTTACGTCTGGAAGTGAACAAACTGGGCGAAGAGCTGGATGCAGCAAAAGCCGAGCTGGATGCTTTACAGGCTGAAATTCGCGATATCGCGCTGACCATCCCTAACCTGCCTGCAGATGAAGTGCCGGTAGGTAAAGACGAAAATGACAACGTTGAAGTCAGCCGCTGGGGTACCCCGCGTGAGTTTGACTTTGAAGTTCGTGACCACGTGACGCTGGGTGAAATGCACTCTGGCCTCGACTTTGCAGCTGCAGTTAAGCTGACTGGTTCCCGCTTTGTGGTAATGAAAGGGCAGATTGCTCGCATGCACCGCGCACTGTCGCAGTTTATGCTGGATCTGCATACCGAACAGCATGGCTACAGTGAGAACTATGTTCCGTACCTGGTTAACCAGGACACGCTGTACGGTACGGGTCAACTGCCGAAATTTGCTGGCGATCTGTTCCATACTCGTCCGCTGGAAGAAGAAGCAGACACCAGTAACTATGCGCTGATCCCAACGGCAGAAGTTCCGCTGACTAACCTGGTGCGCGGTGAAATCATCGATGAAGATGATCTGCCAATTAAGATGACCGCCCACACCCCATGCTTCCGTTCTGAAGCCGGTTCATATGGTCGTGACACCCGTGGTCTGATCCGTATGCACCAGTTCGACAAAGTTGAAATGGTGCAGATCGTGCGCCCAGAAGACTCAATGGCGGCGCTGGAAGAGATGACTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCGACATGGGCTTTGGCGCTTGCAAAACTTACGACCTGGAAGTATGGATCCCGGCACAGAACACCTACCGTGAGATCTCTTCCTGCTCCAACGTTTGGGATTTCCAGGCACGTCGTATGCAGGCACGTTGCCGCAGCAAGTCGGACAAGAAAACCCGTCTGGTTCATACCCTGAACGGTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAA", + "dna_sequence_length": 1293, + "functions": [ + "seryl-tRNA synthetase" + ], + "id": "CDS_874", + "location": [ + [ + "NC_000913", + 939428, + "+", + 1293 + ] + ], + "md5": "67b02cbbef7fd89c8b84b9400e9d9cc3", + "parent_gene": "", + "protein_md5": "5428c38a6a43a1cd085e19ad69956708", + "protein_translation": "MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003044" + ], + [ + "gene_synonym", + "ECK0885" + ], + [ + "gene_synonym", + "EcoGene:EG10232" + ], + [ + "gene_synonym", + "GI:90111183" + ], + [ + "gene_synonym", + "GeneID:945508" + ], + [ + "gene_synonym", + "JW5118" + ], + [ + "gene_synonym", + "NP_415414.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18775" + ], + [ + "gene_synonym", + "b0894" + ], + [ + "gene_synonym", + "dmsA" + ] + ], + "dna_sequence": "ATGAAAACGAAAATCCCTGATGCGGTATTGGCTGCTGAGGTGAGTCGCCGTGGTTTGGTAAAAACGACAGCGATCGGCGGCCTGGCAATGGCCAGCAGCGCATTAACATTACCTTTTAGTCGGATTGCGCACGCTGTCGATAGCGCCATTCCAACAAAATCAGACGAAAAGGTTATCTGGAGCGCCTGTACAGTTAACTGTGGTAGTCGCTGCCCGCTACGTATGCACGTCGTGGACGGTGAAATCAAATATGTCGAAACGGACAATACCGGCGATGACAATTACGACGGCCTGCACCAGGTTCGCGCCTGCCTGCGTGGGCGTTCCATGCGTCGCCGTGTCTACAATCCGGACCGCCTGAAATATCCGATGAAACGAGTCGGGGCGCGCGGTGAAGGCAAATTCGAGCGCATTAGCTGGGAAGAAGCCTACGACATCATCGCGACCAATATGCAGCGCCTGATCAAAGAGTACGGCAACGAGTCTATCTATCTGAACTATGGCACCGGTACGCTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGGCCACTATAAAGCTTATATTCTGGGTGAAGGGCCAGATGGCGTGGCTAAAACGCCGGAATGGGCCTCGCAAATCACTGGTGTTCCGGCAGACAAAATCATCAAATTGGCTCGTGAAATCGGTAGTACCAAACCGGCGTTTATCAGCCAGGGATGGGGCCCGCAGCGTCACGCTAACGGTGAAATCGCAACCCGTGCTATCTCGATGCTGGCGATTCTGACCGGTAACGTTGGTATTAACGGAGGCAACAGCGGCGCGCGTGAAGGTTCATACAGCTTACCGTTTGTCCGTATGCCGACCTTGGAAAACCCGATCCAGACCAGCATTTCGATGTTTATGTGGACCGATGCCATTGAACGTGGCCCGGAAATGACGGCGCTGCGTGATGGTGTACGCGGGAAAGATAAGCTGGATGTGCCGATCAAAATGATCTGGAACTATGCCGGTAACTGCCTGATTAACCAGCATTCTGAAATCAACCGTACCCATGAAATCCTTCAGGATGATAAGAAGTGCGAGCTGATTGTGGTTATCGACTGCCACATGACCTCATCGGCGAAATATGCTGACATCCTGCTGCCTGACTGCACCGCTTCCGAACAGATGGACTTTGCGCTGGATGCATCCTGCGGGAATATGTCTTACGTGATTTTCAACGATCAGGTGATTAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGGCAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGATAAAGTCAGGATCTTTAACGATCGTGGTGAGGTTCATATTGAGGCGAAAGTGACGCCACGAATGATGCCGGGTGTGGTCGCACTGGGTGAAGGTGCCTGGTATGACCCGGATGCAAAACGTGTCGATAAGGGTGGTTGTATTAACGTACTGACCACTCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAA", + "dna_sequence_length": 2445, + "functions": [ + "dimethyl sulfoxide reductase, anaerobic, subunit A" + ], + "id": "CDS_875", + "location": [ + [ + "NC_000913", + 940959, + "+", + 2445 + ] + ], + "md5": "e19d5c7735b43753e83b068f72d087c3", + "parent_gene": "", + "protein_md5": "68b0dd089536b4ce2404d75deec8bb41", + "protein_translation": "MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGIHNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV", + "protein_translation_length": 814, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003046" + ], + [ + "gene_synonym", + "ECK0886" + ], + [ + "gene_synonym", + "EcoGene:EG10233" + ], + [ + "gene_synonym", + "GI:16128862" + ], + [ + "gene_synonym", + "GeneID:945507" + ], + [ + "gene_synonym", + "JW0878" + ], + [ + "gene_synonym", + "NP_415415.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18776" + ], + [ + "gene_synonym", + "b0895" + ], + [ + "gene_synonym", + "dmsB" + ] + ], + "dna_sequence": "ATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGCGAGCTGGCCTGTAAAGACTACAAAGATTTGACGCCAGAAGTCAGCTTCCGCCGCATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAACGGTGTCTGGCACCAGAACGTGTTTGCCTACTATCTGTCGATTTCATGTAACCACTGCGAAGATCCGGCTTGTACTAAAGTCTGCCCGAGCGGTGCGATGCATAAACGTGAAGATGGTTTTGTTGTGGTCGATGAAGATGTGTGCATTGGCTGCCGCTACTGCCATATGGCTTGCCCGTATGGCGCACCGCAATATAACGAAACGAAAGGCCATATGACCAAATGCGATGGTTGTTATGACCGTGTTGCGGAGGGTAAAAAGCCGATCTGTGTTGAATCTTGTCCGCTGCGGGCGCTGGATTTCGGCCCTATCGACGAGCTGCGTAAAAAACATGGCGATCTGGCGGCCGTTGCGCCGTTGCCGCGAGCTCACTTTACCAAACCGAATATTGTGATCAAACCCAATGCCAATAGCCGCCCGACCGGGGATACCACTGGCTATCTGGCAAACCCGAAGGAGGTGTGA", + "dna_sequence_length": 618, + "functions": [ + "dimethyl sulfoxide reductase, anaerobic, subunit B" + ], + "id": "CDS_876", + "location": [ + [ + "NC_000913", + 943414, + "+", + 618 + ] + ], + "md5": "8713d0779705be8bc458384860340ca9", + "parent_gene": "", + "protein_md5": "f64233bd1c609e5d66549657a48d9fe4", + "protein_translation": "MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003048" + ], + [ + "gene_synonym", + "ECK0887" + ], + [ + "gene_synonym", + "EcoGene:EG10234" + ], + [ + "gene_synonym", + "GI:16128863" + ], + [ + "gene_synonym", + "GeneID:945502" + ], + [ + "gene_synonym", + "JW0879" + ], + [ + "gene_synonym", + "NP_415416.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18777" + ], + [ + "gene_synonym", + "b0896" + ], + [ + "gene_synonym", + "dmsC" + ] + ], + "dna_sequence": "ATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTATGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAACTCGCTCAACCGGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCGGTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTGGGTTACCTGTTGTTGAGTCTGGCTGGCGTCGATGGCTGGGCGATGCGTCTGCTGCCAGCAATTTCTGTACTGGCACTGGTAGTGAGTGGCGTGGTGTCAGTGATGCAGGGCGCAGAGCTGGCGACTATTCATAGTTCTGTGCAGCAGGCCGCAGCGCTGGTGCCGGACTATGGTGCGCTGATGTCCTGGCGGATCGTGCTTTTGGCCGTTGCCCTGTGCTTGTGGATTGCACCACAGCTAAAAGGTTATCAGCCTGCGGTTCCGCTACTTTCTGTATCATTCATTCTGCTTCTGGCAGGGGAATTAATCGGTCGCGGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAA", + "dna_sequence_length": 864, + "functions": [ + "dimethyl sulfoxide reductase, anaerobic, subunit C" + ], + "id": "CDS_877", + "location": [ + [ + "NC_000913", + 944033, + "+", + 864 + ] + ], + "md5": "19e0b4fd7c899f96a557d34ddd305d39", + "parent_gene": "", + "protein_md5": "0c42678a48843a5c27d22f9dd34c61f5", + "protein_translation": "MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003050" + ], + [ + "gene_synonym", + "ECK0888" + ], + [ + "gene_synonym", + "EcoGene:EG11241" + ], + [ + "gene_synonym", + "GI:16128864" + ], + [ + "gene_synonym", + "GeneID:945512" + ], + [ + "gene_synonym", + "JW0880" + ], + [ + "gene_synonym", + "NP_415417.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21367" + ], + [ + "gene_synonym", + "b0897" + ], + [ + "gene_synonym", + "ycaC" + ] + ], + "dna_sequence": "ATGACCAAACCGTATGTTCGTCTTGATAAAAATGATGCTGCCGTTTTGCTTGTTGATCACCAGGCTGGTTTACTTTCCCTTGTACGGGATATCGAACCCGATAAGTTTAAAAATAACGTGCTGGCGCTGGGTGACCTGGCTAAGTATTTCAACTTACCAACTATTCTTACCACCAGTTTTGAAACCGGTCCTAACGGCCCATTAGTTCCAGAACTGAAAGCACAATTCCCCGATACACCTTACATTGCTCGCCCGGGAAATATTAACGCCTGGGATAACGAAGATTTTGTAAAAGCTGTCAAAGCGACAGGTAAAAAACAGTTAATTATTGCCGGTGTGGTAACCGAAGTTTGCGTGGCATTCCCGGCGCTTTCAGCCATTGAAGAAGGGTTTGACGTCTTTGTCGTGACTGACGCGTCAGGGACCTTTAATGAAATTACCCGGCATTCGGCATGGGATCGCTTGTCGCAAGCTGGTGCGCAATTGATGACATGGTTCGGCGTGGCGTGCGAGCTGCATCGCGACTGGCGTAATGATATTGAAGGACTGGCGACGTTGTTCTCTAACCACATTCCTGATTATCGTAATTTGATGACCAGTTATGACACGTTAACGAAGCAGAAATAA", + "dna_sequence_length": 627, + "functions": [ + "putative isochorismatase family hydrolase" + ], + "id": "CDS_878", + "location": [ + [ + "NC_000913", + 945557, + "-", + 627 + ] + ], + "md5": "e218a36de24d7f8fbd59547a7212d802", + "parent_gene": "", + "protein_md5": "6eaa3a76c2e7f3668a7434cd0d3f6a23", + "protein_translation": "MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003056" + ], + [ + "gene_synonym", + "ECK0889" + ], + [ + "gene_synonym", + "EcoGene:EG11242" + ], + [ + "gene_synonym", + "GI:16128865" + ], + [ + "gene_synonym", + "GeneID:945515" + ], + [ + "gene_synonym", + "JW0881" + ], + [ + "gene_synonym", + "NP_415418.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21503" + ], + [ + "gene_synonym", + "b0898" + ], + [ + "gene_synonym", + "ycaD" + ] + ], + "dna_sequence": "ATGTCCACGTATACCCAGCCTGTCATGCTTTTGCTGTCTGGCCTGCTTTTGTTGACTCTGGCGATTGCGGTGTTAAATACACTCGTGCCGCTTTGGCTCGCCCAGGAACACATGTCCACATGGCAGGTAGGCGTTGTCAGCTCATCCTATTTTACCGGCAACCTTGTCGGTACATTGCTGACAGGGTATGTCATTAAGCGCATTGGCTTTAACCGCAGCTATTATCTGGCCTCCTTCATTTTTGCCGCTGGCTGTGCCGGCCTTGGCCTGATGATTGGATTCTGGAGCTGGTTGGCTTGGCGTTTTGTCGCGGGCGTCGGCTGTGCCATGATTTGGGTGGTTGTTGAGAGCGCGCTGATGTGCAGTGGGACGTCACGTAACCGTGGGCGTTTGCTTGCTGCGTATATGATGGTTTATTACGTGGGAACGTTTTTAGGCCAGTTACTGGTCAGCAAAGTTTCAACCGAGCTGATGTCCGTATTGCCGTGGGTTACAGGTTTGACGTTGGCAGGGATCTTACCGCTGTTGTTTACGCGTGTGCTGAATCAGCAGGCTGAAAACCATGATTCGACGTCAATTACGTCAATGCTAAAACTCCGTCAGGCGCGGCTTGGCGTGAATGGCTGCATTATCTCAGGAATCGTTCTGGGATCTCTATATGGCCTGATGCCGCTGTACCTCAATCACAAAGGGGTGAGCAATGCCAGCATTGGTTTCTGGATGGCGGTACTGGTCAGTGCGGGTATCCTTGGACAATGGCCGATTGGACGTCTGGCGGATAAGTTTGGTCGACTGCTGGTGTTGCGTGTTCAGGTCTTTGTCGTCATTCTCGGCAGTATCGCGATGCTTAGCCAGGCGGCGATGGCCCCAGCGTTATTCATCCTCGGTGCCGCTGGCTTTACGCTATATCCGGTGGCGATGGCATGGGCTTGCGAGAAAGTTGAACATCATCAACTGGTGGCGATGAACCAGGCCTTACTGTTGAGCTATACTGTGGGAAGTCTGCTTGGCCCGTCATTTACCGCTATGCTAATGCAGAATTTCTCCGATAATTTATTGTTTATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAA", + "dna_sequence_length": 1149, + "functions": [ + "putative MFS transporter, inner membrane protein" + ], + "id": "CDS_879", + "location": [ + [ + "NC_000913", + 945871, + "+", + 1149 + ] + ], + "md5": "4ddddf47ee295d9d9c53469ccfe6f958", + "parent_gene": "", + "protein_md5": "a8dd2fdb990fc46d1b3ec00200b5dd8d", + "protein_translation": "MSTYTQPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVGVVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRFVAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSVLPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003058" + ], + [ + "gene_synonym", + "ECK0890" + ], + [ + "gene_synonym", + "EcoGene:EG13697" + ], + [ + "gene_synonym", + "GI:90111184" + ], + [ + "gene_synonym", + "GeneID:945518" + ], + [ + "gene_synonym", + "JW5119" + ], + [ + "gene_synonym", + "NP_415419.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75835" + ], + [ + "gene_synonym", + "b0899" + ], + [ + "gene_synonym", + "ycaM" + ] + ], + "dna_sequence": "ATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGCTGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCATTCCTCATATCGACTTTACCTACATTACCACTATTTCAATGCTGGTTTTCGCGGTTGGCGGAGCAGAGAAGATTTCTCCTTACGTTAATCAAACGCGCAACCCAGGAAAAGAATTTCCAAAAGGGATGTTATGCCTGGCGGTGATGGTTGCGGTTTGTGCCATTCTGGGCTCGCTGGCGATGGGGATGATGTTTGATTCGCGTAATATCCCGGATGACTTAATGACCAACGGTCAGTATTACGCCTTTCAGAAGCTGGGCGAGTATTACAACATGGGTAATACTTTAATGGTGATTTACGCCATTGCGAATACCCTGGGACAAGTAGCGGCGCTGGTATTCTCGATTGATGCCCCGCTTAAAGTGCTATTAGGTGATGCTGACAGCAAATATATTCCAGCCAGTTTATGTCGTACCAACGCTTCTGGTACGCCCGTTAATGGCTATTTTCTGACCCTGGTACTGGTGGCGATTCTGATTATGCTGCCGACTCTCGGCATTGGTGATATGAACAATCTCTATAAATGGCTGTTGAACCTTAATTCGGTAGTGATGCCGCTGCGTTATTTATGGGTATTTGTTGCATTTATTGCAGTCGTTCGCTTGGCGCAGAAATATAAACCAGAATATGTCTTTATTCGTAATAAGCCTCTGGCAATGACCGTCGGGATTTGGTGTTTTGCCTTTACCGCCTTTGCCTGTTTGACGGGGATCTTCCCGAAAATGGAAGCCTTCACTGCAGAGTGGACCTTCCAGTTGGCGCTGAATGTTGCAACGCCGTTTGTGCTGGTAGGATTAGGACTGATATTCCCGCTGCTGGCGCGTAAAGCGAATAGTAAATAA", + "dna_sequence_length": 1431, + "functions": [ + "putative transporter" + ], + "id": "CDS_880", + "location": [ + [ + "NC_000913", + 947229, + "+", + 1431 + ] + ], + "md5": "308a1e2affb70f1497ca8b11f2b331d8", + "parent_gene": "", + "protein_md5": "e3df422ab6879a8f35675aa92ed46de7", + "protein_translation": "MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSIDAPLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFACLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK", + "protein_translation_length": 476, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003060" + ], + [ + "gene_synonym", + "ECK0891" + ], + [ + "gene_synonym", + "EcoGene:EG13698" + ], + [ + "gene_synonym", + "GI:16128867" + ], + [ + "gene_synonym", + "GeneID:945523" + ], + [ + "gene_synonym", + "JW0883" + ], + [ + "gene_synonym", + "NP_415420.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75836" + ], + [ + "gene_synonym", + "b0900" + ], + [ + "gene_synonym", + "ycaN" + ] + ], + "dna_sequence": "ATGCGGATGAATATGTCTGACTTTGCCACTTTCTTTGCCGTGGCCCGTAATCAAAGCTTTCGTGCAGCGGGCGATGAGTTAGGCTTATCCTCGTCCGCCATTAGCCATAGTATTAAAACACTGGAACAACGTCTTAAAATTCGCTTATTCAATCGGACAACCCGAAGCGTATCGTTAACGGAAGCGGGTTCTAATCTCTATGAACGATTGCGCCCAGCTTTCGACGAAATTCAGATCATGTTAGATGAGATGAATGATTTTCGTCTGACACCGACAGGAACGCTCAAAATCAATGCCGCCCGGGTAGCTGCACGTATATTTTTAATGTCTTTACTGGTTGGTTTCACACGTGAATATCCTGATATTAAAGTCGAGCTCACAACTGACGACTCTCTTGTCGATATCGTCCAACAGGGCTTTGACGCTGGCGTTCGACTTAGTTGCATCGTCGAAAAAGATATGATCAGCGTGGCGATCGGCCCGCCAGTGAAATTATGTGTAGCAGCAACGCCAGAGTACTTTGCAAGATATGGCAAACCCCGCCATCCTCATGATCTGCTTAATCATCAATGTGTTGTTTTTCGTTATCCCAGCGGCAAACCTTTCCACTGGCAATTTGCAAAGGAGCTGGAAATTGCTGTCGCAGGAAATATCATTCTGGATGATGTTGATGCTGAACTGGAGGCCGTTTTGATGGGTGCTGGTATCGGGTATCTGCTCTATGAACAGATCAAGGAGTACCTTGATACTGGTCGTTTAGAATGTGTACTGGAAGACTGGAGCACAGAGCGTCCAGGCTTCCAGATCTATTATCCAAACCGCCAGTATATGTCCTGCGGCTTGCGCGCATTTCTCGATTATGTAAAAACGGGTCAGATCTGCCAGAGTCAGCGTCACCGACCACAATAA", + "dna_sequence_length": 909, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_881", + "location": [ + [ + "NC_000913", + 949568, + "-", + 909 + ] + ], + "md5": "3aa8ad6cad0d58ffc44785e0ef51441d", + "parent_gene": "", + "protein_md5": "357aced78900dc6ca3132390a7ae1e35", + "protein_translation": "MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHRPQ", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003065" + ], + [ + "gene_synonym", + "ECK0892" + ], + [ + "gene_synonym", + "EcoGene:EG12702" + ], + [ + "gene_synonym", + "GI:16128868" + ], + [ + "gene_synonym", + "GeneID:945520" + ], + [ + "gene_synonym", + "JW0884" + ], + [ + "gene_synonym", + "NP_415421.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43340" + ], + [ + "gene_synonym", + "b0901" + ], + [ + "gene_synonym", + "ycaK" + ] + ], + "dna_sequence": "ATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATGTGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAA", + "dna_sequence_length": 591, + "functions": [ + "putative NAD(P)H-dependent oxidoreductase" + ], + "id": "CDS_882", + "location": [ + [ + "NC_000913", + 949668, + "+", + 591 + ] + ], + "md5": "5170d5117701f013094e4ed61e77ac9f", + "parent_gene": "", + "protein_md5": "39abe98e4946779c8b765fa528e44006", + "protein_translation": "MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003068" + ], + [ + "gene_synonym", + "ECK0893" + ], + [ + "gene_synonym", + "EcoGene:EG10028" + ], + [ + "gene_synonym", + "GI:16128869" + ], + [ + "gene_synonym", + "GeneID:945517" + ], + [ + "gene_synonym", + "JW0885" + ], + [ + "gene_synonym", + "NP_415422.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N4" + ], + [ + "gene_synonym", + "act" + ], + [ + "gene_synonym", + "b0902" + ], + [ + "gene_synonym", + "pflA" + ] + ], + "dna_sequence": "ATGTCAGTTATTGGTCGCATTCACTCCTTTGAATCCTGTGGAACCGTAGACGGCCCAGGTATTCGCTTTATCACCTTTTTCCAGGGCTGCCTGATGCGCTGCCTGTATTGTCATAACCGCGACACCTGGGACACGCATGGCGGTAAAGAAGTTACCGTTGAAGATTTGATGAAGGAAGTGGTGACCTATCGCCACTTTATGAACGCTTCCGGCGGCGGCGTTACCGCATCCGGCGGTGAAGCAATCCTGCAAGCTGAGTTTGTTCGTGACTGGTTCCGCGCCTGCAAAAAAGAAGGCATTCATACCTGTCTGGACACCAACGGTTTTGTTCGTCGTTACGATCCGGTGATTGATGAACTGCTGGAAGTAACCGACCTGGTAATGCTCGATCTCAAACAGATGAACGACGAGATCCACCAAAATCTGGTTGGAGTTTCCAACCACCGCACGCTGGAGTTCGCTAAATATCTGGCGAACAAAAATGTGAAGGTGTGGATCCGCTACGTTGTTGTCCCAGGCTGGTCTGACGATGACGATTCAGCGCATCGCCTCGGTGAATTTACCCGTGATATGGGCAACGTTGAGAAAATCGAGCTTCTCCCCTACCACGAGCTGGGCAAACACAAATGGGTGGCAATGGGTGAAGAGTACAAACTCGACGGTGTTAAACCACCGAAGAAAGAGACCATGGAACGCGTGAAAGGCATTCTTGAGCAGTACGGTCATAAGGTAATGTTCTAA", + "dna_sequence_length": 741, + "functions": [ + "pyruvate formate-lyase 1-activating enzyme", + "[formate-C-acetyltransferase 1]-activating enzyme", + "PFL activase" + ], + "id": "CDS_883", + "location": [ + [ + "NC_000913", + 951080, + "-", + 741 + ] + ], + "md5": "1ed5917b1dc772f9371200d53d87a2fa", + "parent_gene": "", + "protein_md5": "060a51c91c15fb6764d5ea2d7f7ffcc4", + "protein_translation": "MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003071" + ], + [ + "gene_synonym", + "ECK0894" + ], + [ + "gene_synonym", + "EcoGene:EG10701" + ], + [ + "gene_synonym", + "GI:16128870" + ], + [ + "gene_synonym", + "GeneID:945514" + ], + [ + "gene_synonym", + "JW0886" + ], + [ + "gene_synonym", + "NP_415423.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09373" + ], + [ + "gene_synonym", + "b0903" + ], + [ + "gene_synonym", + "pfl" + ], + [ + "gene_synonym", + "pflB" + ] + ], + "dna_sequence": "ATGTCCGAGCTTAATGAAAAGTTAGCCACAGCCTGGGAAGGTTTTACCAAAGGTGACTGGCAGAATGAAGTAAACGTCCGTGACTTCATTCAGAAAAACTACACTCCGTACGAGGGTGACGAGTCCTTCCTGGCTGGCGCTACTGAAGCGACCACCACCCTGTGGGACAAAGTAATGGAAGGCGTTAAACTGGAAAACCGCACTCACGCGCCAGTTGACTTTGACACCGCTGTTGCTTCCACCATCACCTCTCACGACGCTGGCTACATCAACAAGCAGCTTGAGAAAATCGTTGGTCTGCAGACTGAAGCTCCGCTGAAACGTGCTCTTATCCCGTTCGGTGGTATCAAAATGATCGAAGGTTCCTGCAAAGCGTACAACCGCGAACTGGATCCGATGATCAAAAAAATCTTCACTGAATACCGTAAAACTCACAACCAGGGCGTGTTCGACGTTTACACTCCGGACATCCTGCGTTGCCGTAAATCTGGTGTTCTGACCGGTCTGCCAGATGCATATGGCCGTGGCCGTATCATCGGTGACTACCGTCGCGTTGCGCTGTACGGTATCGACTACCTGATGAAAGACAAACTGGCACAGTTCACTTCTCTGCAGGCTGATCTGGAAAACGGCGTAAACCTGGAACAGACTATCCGTCTGCGCGAAGAAATCGCTGAACAGCACCGCGCTCTGGGTCAGATGAAAGAAATGGCTGCGAAATACGGCTACGACATCTCTGGTCCGGCTACCAACGCTCAGGAAGCTATCCAGTGGACTTACTTCGGCTACCTGGCTGCTGTTAAGTCTCAGAACGGTGCTGCAATGTCCTTCGGTCGTACCTCCACCTTCCTGGATGTGTACATCGAACGTGACCTGAAAGCTGGCAAGATCACCGAACAAGAAGCGCAGGAAATGGTTGACCACCTGGTCATGAAACTGCGTATGGTTCGCTTCCTGCGTACTCCGGAATACGATGAACTGTTCTCTGGCGACCCGATCTGGGCAACCGAATCTATCGGTGGTATGGGCCTCGACGGTCGTACCCTGGTTACCAAAAACAGCTTCCGTTTCCTGAACACCCTGTACACCATGGGTCCGTCTCCGGAACCGAACATGACCATTCTGTGGTCTGAAAAACTGCCGCTGAACTTCAAGAAATTCGCCGCTAAAGTGTCCATCGACACCTCTTCTCTGCAGTATGAGAACGATGACCTGATGCGTCCGGACTTCAACAACGATGACTACGCTATTGCTTGCTGCGTAAGCCCGATGATCGTTGGTAAACAAATGCAGTTCTTCGGTGCGCGTGCAAACCTGGCGAAAACCATGCTGTACGCAATCAACGGCGGCGTTGACGAAAAACTGAAAATGCAGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCATGGACTGGCTGGCTAAACAGTACATCACTGCACTGAACATCATCCACTACATGCACGACAAGTACAGCTACGAAGCCTCTCTGATGGCGCTGCACGACCGTGACGTTATCCGCACCATGGCGTGTGGTATCGCTGGTCTGTCCGTTGCTGCTGACTCCCTGTCTGCAATCAAATATGCGAAAGTTAAACCGATTCGTGACGAAGACGGTCTGGCTATCGACTTCGAAATCGAAGGCGAATACCCGCAGTTTGGTAACAATGATCCGCGTGTAGATGACCTGGCTGTTGACCTGGTAGAACGTTTCATGAAGAAAATTCAGAAACTGCACACCTACCGTGACGCTATCCCGACTCAGTCTGTTCTGACCATCACTTCTAACGTTGTGTATGGTAAGAAAACGGGTAACACCCCAGACGGTCGTCGTGCTGGCGCGCCGTTCGGACCGGGTGCTAACCCGATGCACGGTCGTGACCAGAAAGGTGCAGTAGCCTCTCTGACTTCCGTTGCTAAACTGCCGTTTGCTTACGCTAAAGATGGTATCTCCTACACCTTCTCTATCGTTCCGAACGCACTGGGTAAAGACGACGAAGTTCGTAAGACCAACCTGGCTGGTCTGATGGATGGTTACTTCCACCACGAAGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTCAACTCGCTGACTAAAGAACAGCAGCAGGACGTTATTACTCGTACCTTCACTCAATCTATGTAA", + "dna_sequence_length": 2283, + "functions": [ + "formate C-acetyltransferase 1, anaerobic", + "pyruvate formate-lyase 1" + ], + "id": "CDS_884", + "location": [ + [ + "NC_000913", + 953554, + "-", + 2283 + ] + ], + "md5": "e486d84e0d9028f9f80f55ebf7836aa7", + "parent_gene": "", + "protein_md5": "4f77b69d5001ba9fc7590c12d8fa535f", + "protein_translation": "MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM", + "protein_translation_length": 760, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003073" + ], + [ + "gene_synonym", + "ECK0895" + ], + [ + "gene_synonym", + "EcoGene:EG11258" + ], + [ + "gene_synonym", + "GI:16128871" + ], + [ + "gene_synonym", + "GeneID:945513" + ], + [ + "gene_synonym", + "JW0887" + ], + [ + "gene_synonym", + "NP_415424.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC23" + ], + [ + "gene_synonym", + "b0904" + ], + [ + "gene_synonym", + "focA" + ], + [ + "gene_synonym", + "ycaE" + ] + ], + "dna_sequence": "GTGAAAGCTGACAACCCTTTTGATCTTTTACTTCCTGCTGCAATGGCCAAAGTGGCCGAAGAGGCGGGTGTCTATAAAGCAACGAAACATCCGCTTAAGACTTTCTATCTGGCGATTACCGCCGGTGTTTTCATCTCAATCGCATTCGTCTTCTATATCACAGCAACCACTGGCACAGGCACAATGCCCTTCGGCATGGCAAAACTGGTTGGCGGCATTTGCTTCTCTCTGGGGCTGATTCTTTGTGTTGTCTGCGGAGCCGATCTCTTTACTTCCACCGTGTTGATTGTTGTTGCTAAGGCGAGTGGGCGCATCACCTGGGGTCAGTTGGCGAAAAACTGGCTAAATGTCTATTTTGGCAACCTGGTCGGCGCACTGCTGTTTGTACTTTTAATGTGGCTTTCCGGCGAGTATATGACCGCAAATGGTCAATGGGGACTAAACGTCCTACAAACCGCCGACCACAAAGTGCACCATACTTTTATTGAGGCCGTCTGTCTTGGTATCCTGGCAAACCTGATGGTATGTCTGGCAGTATGGATGAGTTATTCTGGCCGCAGCCTGATGGACAAAGCGTTCATTATGGTGCTGCCGGTCGCGATGTTTGTTGCCAGCGGTTTTGAGCACAGTATCGCAAACATGTTTATGATCCCGATGGGTATTGTAATCCGCGACTTCGCATCCCCGGAATTTTGGACCGCAGTCGGTTCTGCACCGGAAAATTTTTCTCACCTGACCGTGATGAATTTCATCACTGATAACCTGATTCCGGTTACGATCGGCAACATTATCGGTGGTGGTTTGTTGGTTGGGTTGACATACTGGGTCATTTACCTGCGTGAAAACGACCACCATTAA", + "dna_sequence_length": 858, + "functions": [ + "formate channel" + ], + "id": "CDS_885", + "location": [ + [ + "NC_000913", + 954466, + "-", + 858 + ] + ], + "md5": "41a0da1fa3bd16289cabff1135b7ec1b", + "parent_gene": "", + "protein_md5": "7aa777189b5ba6c32d0c25be72bd0662", + "protein_translation": "MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003081" + ], + [ + "gene_synonym", + "ECK0896" + ], + [ + "gene_synonym", + "EcoGene:EG13699" + ], + [ + "gene_synonym", + "GI:90111185" + ], + [ + "gene_synonym", + "GeneID:945509" + ], + [ + "gene_synonym", + "JW0888" + ], + [ + "gene_synonym", + "NP_415425.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75838" + ], + [ + "gene_synonym", + "b0905" + ], + [ + "gene_synonym", + "ycaO" + ] + ], + "dna_sequence": "ATGACGCAAACATTTATCCCCGGCAAAGATGCCGCTCTGGAAGATTCCATCGCTCGCTTCCAGCAAAAACTTTCAGACCTCGGCTTTCAGATTGAAGAGGCCTCCTGGCTGAATCCCGTGCCTAACGTCTGGTCTGTACATATTCGCGACAAAGAGTGCGCACTGTGTTTTACCAACGGTAAAGGCGCAACCAAGAAAGCGGCGCTGGCTTCTGCACTCGGTGAATATTTCGAGCGTCTCTCAACCAACTACTTTTTTGCGGACTTCTGGCTGGGCGAAACCATCGCCAACGGTCCGTTCGTGCATTATCCCAACGAAAAATGGTTCCCACTGACCGAAAATGACGATGTGCCAGAAGGGCTGCTCGATGACCGTCTGCGCGCGTTTTATGATCCGGAGAATGAACTGACCGGCAGCATGCTGATTGACCTACAATCCGGTAACGAAGATCGTGGTATTTGCGGCCTGCCGTTTACGCGTCAGTCCGACAATCAGACCGTTTATATTCCGATGAATATCATTGGTAACCTGTACGTCTCCAACGGTATGTCCGCAGGTAATACCCGCAACGAAGCACGCGTTCAGGGATTGTCTGAAGTTTTCGAACGCTACGTGAAAAACCGCATTATTGCTGAAAGCATCAGCCTGCCAGAGATCCCGGCAGACGTGCTGGCGCGTTACCCAGCAGTAGTTGAAGCCATCGAAACGCTGGAAGCGGAGGGTTTCCCAATCTTCGCTTATGACGGTTCGCTTGGCGGCCAGTATCCGGTGATTTGCGTGGTACTGTTCAATCCTGCTAACGGTACCTGCTTTGCCTCTTTCGGTGCGCATCCTGATTTTGGCGTAGCACTGGAACGTACCGTGACCGAGCTGCTGCAAGGTCGTGGCCTGAAAGATTTGGATGTGTTTACTCCGCCAACCTTCGATGATGAAGAAGTCGCTGAACATACCAACCTCGAAACGCACTTTATCGATTCCAGCGGTTTAATCTCCTGGGACCTGTTCAAGCAGGATGCCGATTATCCGTTTGTGGACTGGAATTTCTCCGGCACCACGGAAGAAGAGTTCGCCACACTGATGGCTATCTTCAACAAAGAAGATAAAGAAGTTTATATTGCCGATTACGAGCATCTGGGCGTTTATGCTTGCCGTATTATCGTGCCTGGCATGTCCGATATTTATCCGGCTGAAGATCTGTGGCTCGCGAATAACAGTATGGGCAGCCATTTACGTGAAACGATTCTTTCGCTACCAGGCAGCGAGTGGGAAAAAGAAGATTACCTGAACCTCATCGAGCAACTGGATGAAGAAGGTTTTGATGACTTTACCCGCGTGCGTGAGCTGTTGGGTCTGGCGACCGGGTCGGATAACGGTTGGTACACCCTGCGTATCGGTGAATTAAAAGCCATGCTGGCGCTGGCTGGTGGCGATCTGGAACAGGCTCTGGTCTGGACCGAATGGACGATGGAGTTTAACTCATCAGTATTTAGTCCGGAACGCGCCAACTATTATCGCTGCCTGCAAACGTTGTTATTACTGGCACAGGAAGAAGATCGCCAGCCGCTGCAATATCTGAATGCGTTTGTTCGCATGTACGGCGCAGATGCCGTAGAAGCCGCCAGTGCGGCAATGAGCGGCGAAGCGGCGTTTTACGGCCTGCAACCGGTAGATAGCGATCTGCACGCGTTTGCTGCACATCAGTCGTTGTTGAAGGCCTACGAAAAGCTGCAGCGCGCCAAAGCAGCATTCTGGGCAAAATAA", + "dna_sequence_length": 1761, + "functions": [ + "ribosomal protein S12 methylthiotransferase accessory factor" + ], + "id": "CDS_886", + "location": [ + [ + "NC_000913", + 956632, + "-", + 1761 + ] + ], + "md5": "ae4f381a7478b8211ad884a1c897ab70", + "parent_gene": "", + "protein_md5": "81fa0f48ee292b07953b4dc629a58709", + "protein_translation": "MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK", + "protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003089" + ], + [ + "gene_synonym", + "ECK0897" + ], + [ + "gene_synonym", + "EcoGene:EG13700" + ], + [ + "gene_synonym", + "GI:16128873" + ], + [ + "gene_synonym", + "GeneID:945525" + ], + [ + "gene_synonym", + "JW0889" + ], + [ + "gene_synonym", + "NP_415426.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75839" + ], + [ + "gene_synonym", + "b0906" + ], + [ + "gene_synonym", + "ycaP" + ] + ], + "dna_sequence": "ATGAAGGCGTTCGATCTCCACCGTATGGCATTTGATAAAGTGCCTTTTGATTTCCTTGGCGAAGTTGCACTACGTAGTCTTTATACCTTTGTACTGGTCTTTTTGTTCCTCAAAATGACCGGAAGACGCGGTGTGCGGCAGATGTCGCTGTTTGAAGTTTTAATCATTCTGACGCTGGGATCAGCGGCGGGAGATGTGGCGTTTTATGATGATGTGCCGATGGTCCCGGTACTTATCGTCTTTATTACTCTGGCGTTGTTATACCGCCTGGTAATGTGGTTGATGGCGCACAGTGAAAAACTGGAAGATCTTCTGGAAGGCAAGCCAGTTGTCATTATTGAAGATGGCGAGCTGGCCTGGTCGAAACTCAATAACTCCAACATGACGGAATTTGAGTTCTTTATGGAGCTACGATTGCGTGGCGTGGAGCAGCTGGGGCAGGTACGTCTGGCGATTCTCGAAACCAACGGGCAAATCAGTGTCTATTTCTTTGAAGATGACAAGGTGAAACCGGGTTTACTTATTTTACCCAGTGATTGTACGCAGCGTTACAAAGTGGTGCCGGAGTCGGCGGACTATGCCTGTATTCGTTGTAGTGAAATCATTCATATGAAAGCGGGGGAAAAACAATTATGTCCGCGCTGTGCAAATCCAGAATGGACGAAGGCAAGTCGGGCAAAACGGGTGACCTGA", + "dna_sequence_length": 693, + "functions": [ + "UPF0702 family putative inner membrane protein" + ], + "id": "CDS_887", + "location": [ + [ + "NC_000913", + 956762, + "+", + 693 + ] + ], + "md5": "8fd78eee83131e44cc2c0d1d500cd5a3", + "parent_gene": "", + "protein_md5": "8b942c35860846a30392f6a1560ac9f7", + "protein_translation": "MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANPEWTKASRAKRVT", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003093" + ], + [ + "gene_synonym", + "ECK0898" + ], + [ + "gene_synonym", + "EcoGene:EG10946" + ], + [ + "gene_synonym", + "GI:16128874" + ], + [ + "gene_synonym", + "GeneID:945527" + ], + [ + "gene_synonym", + "JW0890" + ], + [ + "gene_synonym", + "NP_415427.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23721" + ], + [ + "gene_synonym", + "b0907" + ], + [ + "gene_synonym", + "pdxC" + ], + [ + "gene_synonym", + "pdxF" + ], + [ + "gene_synonym", + "serC" + ] + ], + "dna_sequence": "ATGGCTCAAATCTTCAATTTTAGTTCTGGTCCGGCAATGCTACCGGCAGAGGTGCTTAAACAGGCTCAACAGGAACTGCGCGACTGGAACGGTCTTGGTACGTCGGTGATGGAAGTGAGTCACCGTGGCAAAGAGTTCATTCAGGTTGCAGAGGAAGCCGAGAAGGATTTTCGCGATCTTCTTAATGTCCCCTCCAACTACAAGGTATTATTCTGCCATGGCGGTGGTCGCGGTCAGTTTGCTGCGGTACCGCTGAATATTCTCGGTGATAAAACCACCGCAGATTATGTTGATGCCGGTTACTGGGCGGCAAGTGCCATTAAAGAAGCGAAAAAATACTGCACGCCTAATGTCTTTGACGCCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGAAACCATCGATGGTATCGCCATCGACGAAACGCCAGACTTCGGCGCAGATGTGGTGGTCGCCGCTGACTTCTCTTCAACCATTCTTTCCCGTCCGATTGACGTCAGCCGTTATGGTGTAATTTACGCTGGCGCGCAGAAAAATATCGGCCCGGCTGGCCTGACAATCGTCATCGTTCGTGAAGATTTGCTGGGCAAAGCGAATATCGCGTGTCCGTCGATTCTGGATTATTCCATCCTCAACGATAACGGCTCCATGTTTAACACGCCGCCGACATTTGCCTGGTATCTATCTGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGATTTCTACCGCAATGACGTGGCGAAAGCTAACCGTTCGCGGATGAACGTGCCGTTCCAGTTGGCGGACAGTGCGCTTGACAAATTGTTCCTTGAAGAGTCTTTTGCTGCTGGCCTTCATGCACTGAAAGGTCACCGTGTGGTCGGCGGAATGCGCGCTTCTATTTATAACGCCATGCCGCTGGAAGGCGTTAAAGCGCTGACAGACTTCATGGTTGAGTTCGAACGCCGTCACGGTTAA", + "dna_sequence_length": 1089, + "functions": [ + "3-phosphoserine/phosphohydroxythreonine aminotransferase" + ], + "id": "CDS_888", + "location": [ + [ + "NC_000913", + 957653, + "+", + 1089 + ] + ], + "md5": "583d721be6122cdd24fc250df41a55c3", + "parent_gene": "", + "protein_md5": "b7a12bfd41d1b3d3a194d047eb9198dc", + "protein_translation": "MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003095" + ], + [ + "gene_synonym", + "ECK0899" + ], + [ + "gene_synonym", + "EcoGene:EG10073" + ], + [ + "gene_synonym", + "GI:16128875" + ], + [ + "gene_synonym", + "GeneID:945528" + ], + [ + "gene_synonym", + "JW0891" + ], + [ + "gene_synonym", + "NP_415428.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6D3" + ], + [ + "gene_synonym", + "aroA" + ], + [ + "gene_synonym", + "b0908" + ] + ], + "dna_sequence": "ATGGAATCCCTGACGTTACAACCCATCGCTCGTGTCGATGGCACTATTAATCTGCCCGGTTCCAAGAGCGTTTCTAACCGCGCTTTATTGCTGGCGGCATTAGCACACGGCAAAACAGTATTAACCAATCTGCTGGATAGCGATGACGTGCGCCATATGCTGAATGCATTAACAGCGTTAGGGGTAAGCTATACGCTTTCAGCCGATCGTACGCGTTGCGAAATTATCGGTAACGGCGGTCCATTACACGCAGAAGGTGCCCTGGAGTTGTTCCTCGGTAACGCCGGAACGGCAATGCGTCCGCTGGCGGCAGCTCTTTGTCTGGGTAGCAATGATATTGTGCTGACCGGTGAGCCGCGTATGAAAGAACGCCCGATTGGTCATCTGGTGGATGCGCTGCGCCTGGGCGGGGCGAAGATCACTTACCTGGAACAAGAAAATTATCCGCCGTTGCGTTTACAGGGCGGCTTTACTGGCGGCAACGTTGACGTTGATGGCTCCGTTTCCAGCCAATTCCTCACCGCACTGTTAATGACTGCGCCTCTTGCGCCGGAAGATACGGTGATTCGTATTAAAGGCGATCTGGTTTCTAAACCTTATATCGACATCACACTCAATCTGATGAAGACGTTTGGTGTTGAAATTGAAAATCAGCACTATCAACAATTTGTCGTAAAAGGCGGGCAGTCTTATCAGTCTCCGGGTACTTATTTGGTCGAAGGCGATGCATCTTCGGCTTCTTACTTTCTGGCAGCAGCAGCAATCAAAGGCGGCACTGTAAAAGTGACCGGTATTGGACGTAACAGTATGCAGGGTGATATTCGCTTTGCTGATGTGCTGGAAAAAATGGGCGCGACCATTTGCTGGGGCGATGATTATATTTCCTGCACGCGTGGTGAACTGAACGCTATTGATATGGATATGAACCATATTCCTGATGCGGCGATGACCATTGCCACGGCGGCGTTATTTGCAAAAGGCACCACCACGCTGCGCAATATCTATAACTGGCGTGTTAAAGAGACCGATCGCCTGTTTGCGATGGCAACAGAACTGCGTAAAGTCGGCGCGGAAGTGGAAGAGGGGCACGATTACATTCGTATCACTCCTCCGGAAAAACTGAACTTTGCCGAGATCGCGACATACAATGATCACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGA", + "dna_sequence_length": 1284, + "functions": [ + "5-enolpyruvylshikimate-3-phosphate synthetase" + ], + "id": "CDS_889", + "location": [ + [ + "NC_000913", + 958812, + "+", + 1284 + ] + ], + "md5": "01b9705afa11800712b3f6f0e8a96e34", + "parent_gene": "", + "protein_md5": "3d619470281596fe2c36ea304453db83", + "protein_translation": "MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003098" + ], + [ + "gene_synonym", + "ECK0900" + ], + [ + "gene_synonym", + "EcoGene:EG13133" + ], + [ + "gene_synonym", + "GI:90111186" + ], + [ + "gene_synonym", + "GeneID:945534" + ], + [ + "gene_synonym", + "JW0892" + ], + [ + "gene_synonym", + "NP_415429.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43674" + ], + [ + "gene_synonym", + "b0909" + ], + [ + "gene_synonym", + "ycaL" + ] + ], + "dna_sequence": "ATGAAGAATACTAAATTACTGCTGGCGATTGCGACCTCTGCAGCATTACTGACAGGGTGTCAAAATACCCACGGTATTGATACCAATATGGCTATCAGCTCCGGTTTAAATGCCTATAAAGCAGCAACATTAAGCGATGCCGATGCAAAAGCGATTGCCAATCAGGGCTGTGCCGAAATGGACAGCGGCAATCAAGTCGCAAGTAAATCCAGCAAGTACGGTAAACGTCTGGCAAAAATCGCCAAAGCATTGGGTAACAATATTAATGGCACGCCGGTCAACTATAAGGTTTATATGACCAGCGACGTCAACGCATGGGCGATGGCGAACGGCTGTGTTCGTGTCTACAGTGGCCTGATGGACATGATGAATGACAACGAAATTGAAGGCGTTCTGGGCCATGAACTGGGCCACGTCGCGTTGGGTCACTCGCTGGCTGAAATGAAAGCTTCTTATGCGATCGTTGCCGCACGCGATGCCATTTCAGCTACCAGCGGTGTGGCTTCCCAGCTTTCCCGCTCACAATTAGGTGATATCGCAGAAGGCGCTATCAATGCTAAATACTCCCGTGATAAAGAGTCCGAAGCAGATGATTTCTCCTTTGATCTGTTGAAGAAACGTGGCATCAGCACCCAGGGGCTGGTTGGCAGCTTTGAAACACTGGCTAGCCTGGATGGCGGTCGCACCCAGTCCATGTTTGACTCTCACCCACCATCAACAGAGCGTGCGCAACACATCCGTGATCGTATCGCCTCTGGTAAGTAA", + "dna_sequence_length": 765, + "functions": [ + "putative peptidase-related chaperone" + ], + "id": "CDS_890", + "location": [ + [ + "NC_000913", + 960264, + "+", + 765 + ] + ], + "md5": "26caa42d086e71408a864c8fdc81bc25", + "parent_gene": "", + "protein_md5": "fa9eee9ce37cf55213247e138e3f1d15", + "protein_translation": "MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003101" + ], + [ + "gene_synonym", + "ECK0901" + ], + [ + "gene_synonym", + "EcoGene:EG11265" + ], + [ + "gene_synonym", + "GI:16128877" + ], + [ + "gene_synonym", + "GeneID:945535" + ], + [ + "gene_synonym", + "JW0893" + ], + [ + "gene_synonym", + "NP_415430.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6I0" + ], + [ + "gene_synonym", + "b0910" + ], + [ + "gene_synonym", + "cmk" + ], + [ + "gene_synonym", + "mssA" + ], + [ + "gene_synonym", + "ycaF" + ], + [ + "gene_synonym", + "ycaG" + ] + ], + "dna_sequence": "ATGACGGCAATTGCCCCGGTTATTACCATTGATGGCCCAAGCGGTGCAGGGAAAGGCACCTTGTGTAAGGCTATGGCGGAAGCGTTGCAATGGCATCTGCTGGACTCGGGTGCAATTTATCGCGTACTGGCATTGGCGGCATTACATCACCATGTTGATGTTGCGTCGGAAGATGCGCTGGTACCGCTGGCATCCCATCTGGATGTACGTTTTGTGTCGACCAATGGCAATCTGGAAGTGATCCTCGAAGGGGAAGATGTCAGCGGCGAAATTCGTACTCAGGAAGTGGCGAATGCAGCTTCACAAGTCGCGGCATTCCCACGCGTTCGTGAAGCATTATTGCGTCGCCAACGCGCGTTTCGCGAATTACCAGGTCTGATTGCCGATGGCCGCGACATGGGAACGGTGGTATTCCCTGATGCACCAGTGAAAATTTTCCTTGACGCCTCCTCGGAAGAACGTGCGCATCGCCGCATGCTACAGTTGCAGGAGAAGGGCTTTAGTGTTAACTTTGAGCGCCTTTTGGCCGAGATCAAAGAACGCGACGACCGCGATCGTAACCGAGCGGTAGCGCCACTGGTTCCGGCAGCCGATGCTTTAGTGTTGGATTCCACCACCTTAAGCATTGAGCAAGTGATTGAAAAAGCGCTACAATACGCGCGCCAGAAATTGGCTCTCGCATAA", + "dna_sequence_length": 684, + "functions": [ + "cytidylate kinase" + ], + "id": "CDS_891", + "location": [ + [ + "NC_000913", + 961201, + "+", + 684 + ] + ], + "md5": "d288ccb95c4d2e784971a109c14f55d7", + "parent_gene": "", + "protein_md5": "0f7490d45baddf54e20237a41e546b97", + "protein_translation": "MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA", + "protein_translation_length": 227, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003104" + ], + [ + "gene_synonym", + "ECK0902" + ], + [ + "gene_synonym", + "EcoGene:EG10900" + ], + [ + "gene_synonym", + "GI:16128878" + ], + [ + "gene_synonym", + "GeneID:945536" + ], + [ + "gene_synonym", + "JW0894" + ], + [ + "gene_synonym", + "NP_415431.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG67" + ], + [ + "gene_synonym", + "b0911" + ], + [ + "gene_synonym", + "rpsA" + ], + [ + "gene_synonym", + "ssyF" + ] + ], + "dna_sequence": "ATGACTGAATCTTTTGCTCAACTCTTTGAAGAGTCCTTAAAAGAAATCGAAACCCGCCCGGGTTCTATCGTTCGTGGCGTTGTTGTTGCTATCGACAAAGACGTAGTACTGGTTGACGCTGGTCTGAAATCTGAGTCCGCCATCCCGGCTGAGCAGTTCAAAAACGCCCAGGGCGAGCTGGAAATCCAGGTAGGTGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGATCACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTCGTGCGTTCCTGCCAGGTTCTCTGGTAGACGTTCGTCCGGTGCGTGACACTCTGCACCTGGAAGGCAAAGAGCTTGAATTTAAAGTAATCAAGCTGGATCAGAAGCGCAACAACGTTGTTGTTTCTCGTCGTGCCGTTATCGAATCCGAAAACAGCGCAGAGCGCGATCAGCTGCTGGAAAACCTGCAGGAAGGCATGGAAGTTAAAGGTATCGTTAAGAACCTCACTGACTACGGTGCATTCGTTGATCTGGGCGGCGTTGACGGCCTGCTGCACATCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAATCACTGTTAAAGTGCTGAAGTTCGACCGCGAACGTACCCGTGTATCCCTGGGCCTGAAACAGCTGGGCGAAGATCCGTGGGTAGCTATCGCTAAACGTTATCCGGAAGGTACCAAACTGACTGGTCGCGTGACCAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAAGTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCGTTGAAGGTTACCTGCGTGCTTCTGAAGCATCCCGTGACCGCGTTGAAGACGCTACCCTGGTTCTGAGCGTTGGCGACGAAGTTGAAGCTAAATTCACCGGCGTTGATCGTAAAAACCGCGCAATCAGCCTGTCTGTTCGTGCGAAAGACGAAGCTGACGAGAAAGATGCAATCGCAACTGTTAACAAACAGGAAGATGCAAACTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAA", + "dna_sequence_length": 1674, + "functions": [ + "30S ribosomal subunit protein S1" + ], + "id": "CDS_892", + "location": [ + [ + "NC_000913", + 961995, + "+", + 1674 + ] + ], + "md5": "75165db6ef7a215fb50176570957c724", + "parent_gene": "", + "protein_md5": "3a715b3d0635089e27f33e920bee8f54", + "protein_translation": "MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE", + "protein_translation_length": 557, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003107" + ], + [ + "gene_synonym", + "ECK0903" + ], + [ + "gene_synonym", + "EcoGene:EG10441" + ], + [ + "gene_synonym", + "GI:16128879" + ], + [ + "gene_synonym", + "GeneID:945533" + ], + [ + "gene_synonym", + "JW0895" + ], + [ + "gene_synonym", + "NP_415432.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Y1" + ], + [ + "gene_synonym", + "b0912" + ], + [ + "gene_synonym", + "himD" + ], + [ + "gene_synonym", + "hip" + ], + [ + "gene_synonym", + "ihfB" + ] + ], + "dna_sequence": "ATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAA", + "dna_sequence_length": 285, + "functions": [ + "integration host factor (IHF), DNA-binding protein, beta subunit" + ], + "id": "CDS_893", + "location": [ + [ + "NC_000913", + 963828, + "+", + 285 + ] + ], + "md5": "65a45b3b736c0e5129749d5150c7ddba", + "parent_gene": "", + "protein_md5": "2e51831bd5af44198685ea29ced2c512", + "protein_translation": "MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003111" + ], + [ + "gene_synonym", + "ECK0904" + ], + [ + "gene_synonym", + "EcoGene:EG12375" + ], + [ + "gene_synonym", + "GI:90111187" + ], + [ + "gene_synonym", + "GeneID:945531" + ], + [ + "gene_synonym", + "JW5120" + ], + [ + "gene_synonym", + "NP_415433.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37443" + ], + [ + "gene_synonym", + "b0913" + ], + [ + "gene_synonym", + "ycaI" + ] + ], + "dna_sequence": "ATGAAAATAACGACAGTCGGTGTATGCATAATTAGCGGAATTTTTCCGTTGCTGATTTTGCCCCAATTGCCTGGGACATTAACCCTTGCGTTTCTGACTCTCTTCGCCTGCGTACTGGCATTTATCCCTGTTAAAACCGTCCGTTATATCGCGCTGACGTTGCTGTTTTTCGTTTGGGGCATATTATCAGCAAAGCAAATTTTGTGGGCAGGAGAAACCTTAACTGGCGCGACGCAGGATGCAATTGTTGAGATCACTGCAACTGACGGCATGACCACTCATTACGGTCAAATTACTCATCTACAAGGTCGACGTATATTCCCTGCGTCAGGTCTCGTGATGTATGGCGAATATCTTCCGCAAGCGGTTTGTGCTGGACAACAATGGTCAATGAAACTCAAAGTTCGTGCAGTTCATGGCCAACTTAATGATGGCGGCTTTGATAGCCAGCGTTATGCCATTGCCCAGCATCAGCCGCTCACCGGCCGTTTTCTGCAGGCAAGTGTCATTGAACCGAATTGTAGCCTGCGTGCACAGTATCTGGCGTCACTACAAACAACGCTGCAACCCTATCCGTGGAATGCGGTTATTCTTGGTTTAGGTATGGGGGAACGGTTATCCGTCCCCAAAGAAATCAAAAATATCATGCGCGATACTGGAACGGCGCATTTAATGGCGATATCGGGATTGCACATCGCTTTTGCGGCGTTGCTGGCTGCCGGACTCATTCGCAGTGGACAAATTTTTCTGCCTGGGCGCTGGATCCACTGGCAAATACCATTAATTGGCGGAATCTGCTGTGCTGCTTTTTATGCCTGGTTGACGGGAATGCAACCTCCTGCATTGCGTACCATGGTGGCGCTTGCTACGTGGGGAATGCTTAAGTTAAGTGGGCGACAGTGGAGTGGCTGGGATGTATGGATATGTTGTCTGGCGGCAATTTTGCTGATGGATCCTGTTGCCATTCTCTCGCAAAGTTTATGGCTCTCTGCCGCTGCGGTCGCGGCATTGATATTTTGGTATCAGTGGTTTCCCTGTCCTGAGTGGCAACTGCCGCCGGTATTGCGTGCAGTTGTTTCCCTCATCCATCTGCAACTGGGAATCACACTTCTGCTTATGCCCGTGCAAATCGTCATATTTCATGGCATTAGTCTGACCTCGTTTATTGCAAATCTATTAGCAATTCCCTTGGTGACATTTATCACGGTTCCGTTGATCCTCGCCGCGATGGTTGTGCATTTAAGCGGGCCGTTAATCCTGGAGCAAGGGTTATGGTTTCTTGCCGACCGGTCTTTGGCTTTACTTTTCTGGGGGTTAAAGAGTTTGCCGGAAGGGTGGATCAACATTGCTGAATGTTGGCAATGGCTATCATTTTCCCCATGGTTCTTACTGGTGGTATGGCGATTAAACGCCTGGCGAACGTTGCCAGCAATGTGTGTGGCTGGAGGCTTGCTGATGTGCTGGCCGCTGTGGCAAAAACCTCGACCTGACGAGTGGCAGCTGTACATGCTTGATGTCGGGCAAGGGCTGGCAATGGTGATAGCCAGAAACGGCAAAGCGATTCTCTATGACACAGGACTGGCCTGGCCTGAAGGGGATAGTGGGCAACAACTGATTATCCCCTGGCTCCACTGGCATAATCTTGAACCGGAAGGCGTTATTCTGAGCCATGAACATCTGGATCACCGGGGAGGGCTGGATTCAATATTGCATATATGGCCGATGTTATGGATCAGAAGTCCGTTAAACTGGGAACATCATCAGCCCTGTGTGCGTGGCGAAGCGTGGCAATGGCAAGGATTGCGTTTCAGCGCGCACTGGCCTTTACAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGTGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACAAAGTTAAGCATCGCTATCAACTGCAAGGATATCAATGGATTGATACTCCACATCAAGGTCAAACAACGGTCAATTTTTCAGCGCAAGGCTGGCGGATTAGCAGCCTCAGGGAGCAAATTTTACCTCGTTGGTATCATCAGTGGTTTGGCGTGCCAGTGGATAACGGGTAG", + "dna_sequence_length": 2265, + "functions": [ + "ComEC family inner membrane protein" + ], + "id": "CDS_894", + "location": [ + [ + "NC_000913", + 964320, + "+", + 2265 + ] + ], + "md5": "45116e91278464e2d46e7930e9233f28", + "parent_gene": "", + "protein_md5": "373bbab8191d4a4ac69422e3a3369911", + "protein_translation": "MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG", + "protein_translation_length": 754, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003113" + ], + [ + "gene_synonym", + "ECK0905" + ], + [ + "gene_synonym", + "EcoGene:EG10613" + ], + [ + "gene_synonym", + "GI:16128881" + ], + [ + "gene_synonym", + "GeneID:945530" + ], + [ + "gene_synonym", + "JW0897" + ], + [ + "gene_synonym", + "NP_415434.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60752" + ], + [ + "gene_synonym", + "b0914" + ], + [ + "gene_synonym", + "msbA" + ] + ], + "dna_sequence": "ATGCATAACGACAAAGATCTCTCTACGTGGCAGACATTCCGCCGACTGTGGCCAACCATTGCGCCTTTCAAAGCGGGTCTGATCGTGGCGGGCGTAGCGTTAATCCTCAACGCAGCCAGCGATACCTTCATGTTATCGCTCCTTAAGCCACTTCTTGATGATGGCTTTGGTAAAACAGATCGCTCCGTGCTGGTGTGGATGCCGCTGGTGGTGATCGGGCTGATGATTTTACGTGGTATCACCAGCTATGTCTCCAGCTACTGTATCTCCTGGGTATCAGGAAAGGTGGTAATGACCATGCGTCGCCGCCTGTTTGGTCACATGATGGGAATGCCAGTTTCATTCTTTGACAAACAGTCAACGGGTACGCTGTTGTCACGTATTACCTACGATTCCGAACAGGTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCACCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGATTTTCGGTGGTCAGGAAGTGGAAACGAAACGCTTTGATAAAGTCAGCAACCGAATGCGTCTTCAGGGGATGAAAATGGTTTCAGCCTCTTCCATCTCTGATCCGATCATTCAGCTGATCGCCTCTTTGGCGCTGGCGTTTGTTCTGTATGCGGCGAGCTTCCCAAGTGTCATGGATAGCCTGACTGCCGGTACGATTACCGTTGTTTTCTCTTCAATGATTGCACTGATGCGTCCGCTGAAATCGCTGACCAACGTTAACGCCCAGTTCCAGCGCGGTATGGCGGCTTGTCAGACGCTGTTTACCATTCTGGACAGTGAGCAGGAGAAAGATGAAGGTAAGCGCGTGATCGAGCGTGCGACTGGCGACGTGGAATTCCGCAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGATCTGCGCGAGTATACCCTGGCGTCGTTACGTAACCAGGTTGCTCTGGTGTCGCAGAATGTCCATCTGTTTAACGATACGGTTGCTAACAACATTGCTTACGCACGGACTGAACAGTACAGCCGTGAGCAAATTGAAGAAGCGGCGCGTATGGCCTACGCCATGGACTTCATCAATAAGATGGATAACGGTCTCGATACAGTGATTGGTGAAAACGGCGTGCTGCTCTCTGGCGGTCAGCGTCAGCGTATTGCTATCGCTCGAGCCTTGTTGCGTGATAGCCCGATTCTGATTCTGGACGAAGCTACCTCGGCTCTGGATACCGAATCCGAACGTGCGATTCAGGCGGCACTGGATGAGTTGCAGAAAAACCGTACCTCTCTGGTGATTGCCCACCGCTTGTCTACCATTGAAAAGGCAGACGAAATCGTGGTCGTCGAGGATGGTGTCATTGTGGAACGCGGTACGCATAACGATTTGCTTGAGCACCGCGGCGTTTACGCGCAACTTCACAAAATGCAGTTTGGCCAATGA", + "dna_sequence_length": 1749, + "functions": [ + "lipid ABC transporter permease/ATPase" + ], + "id": "CDS_895", + "location": [ + [ + "NC_000913", + 966621, + "+", + 1749 + ] + ], + "md5": "d9241f5cb2ef99acfb25416a04b3d9c4", + "parent_gene": "", + "protein_md5": "bb4f3221a11faf89b813e5b68603aa1e", + "protein_translation": "MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ", + "protein_translation_length": 582, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003115" + ], + [ + "gene_synonym", + "ECK0906" + ], + [ + "gene_synonym", + "EcoGene:EG11409" + ], + [ + "gene_synonym", + "GI:16128882" + ], + [ + "gene_synonym", + "GeneID:945526" + ], + [ + "gene_synonym", + "JW0898" + ], + [ + "gene_synonym", + "NP_415435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27300" + ], + [ + "gene_synonym", + "b0915" + ], + [ + "gene_synonym", + "lpxK" + ], + [ + "gene_synonym", + "ycaH" + ] + ], + "dna_sequence": "ATGATCGAAAAAATCTGGTCTGGTGAATCCCCTTTGTGGCGGCTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAACGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCACAACAGCACAGGCGGGTGATGAACCTGTGTTGATTTATCAACGCACTGATGCGCCTGTTGCGGTTTCTCCCGTTCGTTCTGATGCGGTAAAAGCCATTCTGGCGCAACACCCTGATGTGCAGATCATCGTAACCGACGACGGTTTACAGCATTACCGTCTGGCGCGTGATGTGGAAATTGTCGTTATTGATGGTGTGCGTCGCTTTGGCAATGGCTGGTGGTTGCCGGCGGGGCCAATGCGTGAGCGAGCGGGGCGCTTAAAGTCGGTTGATGCGGTAATCGTCAACGGCGGTGTCCCTCGCAGCGGTGAAATCCCCATGCATCTGCTGCCGGGTCAGGCGGTGAATTTACGTACCGGTACGCGTTGTGACGTTGCTCAGCTTGAACATGTAGTGGCGATGGCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTTGCAGAAGAAAATTGGTGGTATTTGCCTGTAGACGCACAGCTTTCAGGTGATGAACCAGCGAAACTGCTTACGCAACTAACCTTGCTGGCTTCTGGCAACTAG", + "dna_sequence_length": 987, + "functions": [ + "lipid A 4'kinase" + ], + "id": "CDS_896", + "location": [ + [ + "NC_000913", + 968366, + "+", + 987 + ] + ], + "md5": "e821435f9e1e64de9ff86a4cedebe32c", + "parent_gene": "", + "protein_md5": "d78d68c2a6c0e7c62a5963d78295cb1f", + "protein_translation": "MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTLLASGN", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003117" + ], + [ + "gene_synonym", + "ECK0907" + ], + [ + "gene_synonym", + "EcoGene:EG13701" + ], + [ + "gene_synonym", + "GI:16128883" + ], + [ + "gene_synonym", + "GeneID:945524" + ], + [ + "gene_synonym", + "JW0899" + ], + [ + "gene_synonym", + "NP_415436.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75843" + ], + [ + "gene_synonym", + "b0916" + ], + [ + "gene_synonym", + "ycaQ" + ] + ], + "dna_sequence": "ATGTCGCTGCCGCACCTCTCCCTTGCTGATGCGCGTAATCTTCACCTTGCCGCACAAGGCCTGTTAAACAAACCCCGCCGTCGAGCGTCGTTGGAGGATATTCCGGCAACGATCTCCCGCATGTCCTTGCTGCAAATCGATACCATCAATATTGTTGCCCGTAGTCCATATCTGGTGCTTTTCAGTCGTCTGGGAAATTATCCTGCCCAGTGGCTGGATGAGTCTCTGGCGCGTGGCGAATTAATGGAATACTGGGCGCATGAAGCCTGCTTTATGCCGCGTAGCGACTTTCGTCTTATTCGCCACCGCATGCTGGCACCTGAAAAAATGGGCTGGAAATACAAAGACGCCTGGATGCAGGAACATGAGGCGGAAATTGCACAGTTAATTCAGCATATTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGAATATTCCGCGAACAGTGGCTGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCGCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAACGCCAGTATGGCTATTTTGTTCTGCCGTTATTACATCGTGGGCAATTAGTTGGGCGAATGGATGCCAAAATGCATCGCCAGACAGGCATCCTTGAAGTTATCTCTCTGTGGTTACAGGAAGGTATTAAACCAACGACAACGCTGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCTCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAA", + "dna_sequence_length": 1233, + "functions": [ + "DUF1006 family protein with C-terminal wHTH domain" + ], + "id": "CDS_897", + "location": [ + [ + "NC_000913", + 969389, + "+", + 1233 + ] + ], + "md5": "675c59d0621dc9f3735e45351337ee28", + "parent_gene": "", + "protein_md5": "4b37f92eb2b3b739e7de4cd88ca4fdbb", + "protein_translation": "MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHDDLLPLLERALAGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEGIKPTTTLQKGLRQAITDFANWQQATRVTLGCCPQGLFTDCRTGWEIDPVA", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003120" + ], + [ + "gene_synonym", + "ECK0908" + ], + [ + "gene_synonym", + "EcoGene:EG14287" + ], + [ + "gene_synonym", + "GI:16128884" + ], + [ + "gene_synonym", + "GeneID:945537" + ], + [ + "gene_synonym", + "JW0900" + ], + [ + "gene_synonym", + "NP_415437.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAZ7" + ], + [ + "gene_synonym", + "b0917" + ], + [ + "gene_synonym", + "ycaR" + ] + ], + "dna_sequence": "ATGGATCATCGTCTGCTTGAAATCATTGCCTGCCCGGTTTGCAACGGAAAACTTTGGTATAACCAGGAAAAACAAGAGCTTATTTGCAAACTGGACAACCTCGCTTTCCCGCTGCGTGATGGCATTCCAGTGTTGCTGGAAACGGAAGCCCGCGTGCTGACTGCTGATGAGAGTAAATCATGA", + "dna_sequence_length": 183, + "functions": [ + "peroxide and acid resistance protein, UPF0434 family" + ], + "id": "CDS_898", + "location": [ + [ + "NC_000913", + 970673, + "+", + 183 + ] + ], + "md5": "e5f198c0002de86eb5a7f6e2297626ec", + "parent_gene": "", + "protein_md5": "f54b03733b9accf07b649354c09ff99e", + "protein_translation": "MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003122" + ], + [ + "gene_synonym", + "ECK0909" + ], + [ + "gene_synonym", + "EcoGene:EG10519" + ], + [ + "gene_synonym", + "GI:16128885" + ], + [ + "gene_synonym", + "GeneID:945539" + ], + [ + "gene_synonym", + "JW0901" + ], + [ + "gene_synonym", + "NP_415438.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04951" + ], + [ + "gene_synonym", + "b0918" + ], + [ + "gene_synonym", + "kdsB" + ] + ], + "dna_sequence": "ATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATCGTTTTGCAGAAGGCCTTGAAACCGTTGGCGATAACTTCCTGCGTCATCTTGGTATTTATGGCTACCGTGCAGGCTTTATCCGTCGTTACGTCAACTGGCAGCCAAGTCCGTTAGAACACATCGAAATGTTAGAGCAGCTTCGTGTTCTGTGGTACGGCGAAAAAATCCATGTTGCTGTTGCTCAGGAAGTTCCTGGCACAGGTGTGGATACCCCTGAAGATCTTGAGCGCGTTCGCGCTGAAATGCGCTAA", + "dna_sequence_length": 747, + "functions": [ + "3-deoxy-manno-octulosonate cytidylyltransferase" + ], + "id": "CDS_899", + "location": [ + [ + "NC_000913", + 970852, + "+", + 747 + ] + ], + "md5": "3fafaf50bc6063868744b63a42f2b952", + "parent_gene": "", + "protein_md5": "4958103bc71341f7156bffe93334285c", + "protein_translation": "MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003125" + ], + [ + "gene_synonym", + "ECK0910" + ], + [ + "gene_synonym", + "EcoGene:EG13702" + ], + [ + "gene_synonym", + "GI:16128886" + ], + [ + "gene_synonym", + "GeneID:945545" + ], + [ + "gene_synonym", + "JW0902" + ], + [ + "gene_synonym", + "NP_415439.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB03" + ], + [ + "gene_synonym", + "b0919" + ], + [ + "gene_synonym", + "ycbJ" + ] + ], + "dna_sequence": "ATGGAACAGCTGCGTGCCGAATTAAGCCATTTACTGGGCGAAAAACTCAGTCGTATTGAGTGCGTCAATGAAAAAGCGGATACGGCGTTGTGGGCTTTGTATGACAGCCAGGGAAACCCAATGCCGTTAATGGCAAGAAGCTTTAGTACGCCCGGAAAAGCCCGACAACTGGCATGGAAAACCACCATGCTGGCAAGAAGTGGGACTGTCCGTATGCCGACTATTTATGGTGTGATGACGCATGAAGAACACCCCGGCCCCGATGTCCTGCTACTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACATGTTGAAGTGCTATGGACCACGCTCAATCAGTTCAATAACACCGGTCTGACGATGCAGGATAAGCGGATCCTGTTTCGCACTCGCGAATGTCTCCCGGCATTATTTGAAGGCTTTAACGACAATTGTGTGCTGATTCACGGTAACTTCTGTTTACGCAGCATGTTGAAAGATTCGCGCAGCGATCAGTTACTGGCGATGGTCGGGCCGGGACTAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGA", + "dna_sequence_length": 894, + "functions": [ + "protein kinase-like domain protein" + ], + "id": "CDS_900", + "location": [ + [ + "NC_000913", + 971752, + "+", + 894 + ] + ], + "md5": "6ceff06c32dfd53ca3458b44c1732cf1", + "parent_gene": "", + "protein_md5": "ff89b03529c68fcffe6ae73cf112382f", + "protein_translation": "MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLMARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEAPARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLNQFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMVGPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVNTGRFSRRNFDLASKSLLPWLA", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003127" + ], + [ + "gene_synonym", + "ECK0911" + ], + [ + "gene_synonym", + "EcoGene:EG12166" + ], + [ + "gene_synonym", + "GI:16128887" + ], + [ + "gene_synonym", + "GeneID:945546" + ], + [ + "gene_synonym", + "JW0903" + ], + [ + "gene_synonym", + "NP_415440.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB01" + ], + [ + "gene_synonym", + "b0920" + ], + [ + "gene_synonym", + "elyC" + ], + [ + "gene_synonym", + "ycbC" + ] + ], + "dna_sequence": "ATGCTTTTTACACTGAAAAAAGTGATTGGCAATATGTTGCTGCCACTTCCGCTGATGTTGTTGATTATTGGCGCTGGCCTGGCGCTGCTGTGGTTTAGCCGTTTTCAAAAAACCGGGAAGATTTTTATTAGCATTGGGTGGCTGGCGCTCTTGTTATTGAGTTTGCAACCGGTAGCCGACCGCCTGCTGCGTCCCATCGAAAGCACCTATCCGACATGGAATAATTCGCAAAAAGTGGACTATATCGTGGTGCTCGGAGGTGGTTATACCTGGAACCCGCAGTGGGCACCGAGCTCTAATTTAATCAATAACAGTCTGCCACGCCTGAATGAAGGTATTCGCTTATGGCGCGAAAATCCGGGATCAAAACTGATCTTCACGGGAGGCGTAGCAAAAACCAATACGGTGAGTACAGCGGAAGTAGGTGCCAGAGTTGCGCAATCGCTGGGCGTGCCGCGCGAGCAAATTATCACCCTGGATTTGCCAAAAGATACCGAAGAAGAAGCTGCAGCAGTGAAACAGGCGATTGGTGACGCCCCTTTCCTGCTGGTGACCTCCGCATCACATCTGCCGCGGGCGATGATCTTTTTTCAGCAGGAAGGGTTAAATCCGCTACCAGCCCCGGCGAATCAGTTGGCCATCGACTCGCCGCTTAACCCGTGGGAACGGGCAATCCCTTCTCCGGTCTGGTTGATGCATAGCGATCGTGTTGGCTATGAAACGCTTGGCCGTATCTGGCAGTGGCTAAAAGGTTCGTCAGGCGAGCCACGGCAAGAGTGA", + "dna_sequence_length": 780, + "functions": [ + "envelope biogenesis factor", + "DUF218 superfamily protein" + ], + "id": "CDS_901", + "location": [ + [ + "NC_000913", + 973401, + "-", + 780 + ] + ], + "md5": "ac23462da3aa8d61ad3db1c0e059be90", + "parent_gene": "", + "protein_md5": "127d0173cfd988c9ebeac149d149284b", + "protein_translation": "MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGSSGEPRQE", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003131" + ], + [ + "gene_synonym", + "ECK0912" + ], + [ + "gene_synonym", + "EcoGene:EG12167" + ], + [ + "gene_synonym", + "GI:16128888" + ], + [ + "gene_synonym", + "GeneID:945547" + ], + [ + "gene_synonym", + "JW0904" + ], + [ + "gene_synonym", + "NP_415441.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36566" + ], + [ + "gene_synonym", + "b0921" + ], + [ + "gene_synonym", + "smtA" + ], + [ + "gene_synonym", + "ycbD" + ] + ], + "dna_sequence": "ATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTGCTGGCGGAAATGGGCCCGCAAAAACTGCGTGTGCTGGATGCTGGCGGTGGAGAAGGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGGTCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAGACCCTCTGGTCAGTGTTGCGTCCAGGCGGCGTGTTGTCGTTAATGTTCTACAATGCGCATGGTTTGTTGATGCATAACATGGTCGCCGGGAATTTTGATTACGTGCAGGCGGGAATGCCGAAAAAGAAAAAACGGACGCTTTCGCCAGATTATCCACGCGACCCGGCGCAGGTTTATCTGTGGCTGGAAGAAGCTGGTTGGCAAATTATGGGTAAGACAGGCGTTCGCGTGTTTCATGATTATCTGCGCGAGAAACACCAGCAGCGCGACTGCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGA", + "dna_sequence_length": 786, + "functions": [ + "putative S-adenosyl-L-methionine-dependent methyltransferase" + ], + "id": "CDS_902", + "location": [ + [ + "NC_000913", + 973537, + "+", + 786 + ] + ], + "md5": "5566a7ebc7b2958dc6f7a8643a8a8e81", + "parent_gene": "", + "protein_md5": "ae2794a89131c536e6628a86d1019515", + "protein_translation": "MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003134" + ], + [ + "gene_synonym", + "ECK0913" + ], + [ + "gene_synonym", + "EcoGene:EG12165" + ], + [ + "gene_synonym", + "GI:16128889" + ], + [ + "gene_synonym", + "GeneID:945548" + ], + [ + "gene_synonym", + "JW0905" + ], + [ + "gene_synonym", + "NP_415442.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60293" + ], + [ + "gene_synonym", + "b0922" + ], + [ + "gene_synonym", + "kicB" + ], + [ + "gene_synonym", + "mukF" + ] + ], + "dna_sequence": "ATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCCATGTGAGTGATGCGTTTGAGCAAACCAGCGAAACCATCGGCGTGCGCGCCAATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTGAACCGCTTTACCAGCGAGCAGGCGGAAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCATTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGAATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCAGGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCCATGACGATCTGCATTTCGTCGATCGTCTGGTGTTCGATCTGCAGAGCAAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAACTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAATATCTGTCACAGTATCCGCGTGCACGTCACTTTGACGTTGCGCGTATTGTTATTGATCAGGCGGTACGTCTTGGCGTAGCGCAAGCAGATTTCACCGGACTGCCAGCGAAATGGCAGCCGATTAATGATTACGGAGCCAAGGTACAGGCGCATGTCATCGACAAATATTGA", + "dna_sequence_length": 1323, + "functions": [ + "chromosome condensin MukBEF, kleisin-like subunit, binds calcium" + ], + "id": "CDS_903", + "location": [ + [ + "NC_000913", + 974319, + "+", + 1323 + ] + ], + "md5": "e3adb5d5f91ac6eade03e0c3e52f1374", + "parent_gene": "", + "protein_md5": "acbb48e71c3c393506fdb692a2b1f8f3", + "protein_translation": "MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRARHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003136" + ], + [ + "gene_synonym", + "ECK0914" + ], + [ + "gene_synonym", + "EcoGene:EG11252" + ], + [ + "gene_synonym", + "GI:226524705" + ], + [ + "gene_synonym", + "GeneID:945550" + ], + [ + "gene_synonym", + "JW0906" + ], + [ + "gene_synonym", + "NP_415443.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22524" + ], + [ + "gene_synonym", + "b0923" + ], + [ + "gene_synonym", + "kicA" + ], + [ + "gene_synonym", + "mukE" + ], + [ + "gene_synonym", + "ycbA" + ] + ], + "dna_sequence": "ATGTCATCGACAAATATTGAACAAGTGATGCCGGTTAAGCTGGCGCAGGCGCTGGCGAATCCGTTATTTCCGGCGCTGGACAGCGCCTTACGTTCAGGACGCCATATTGGCCTCGACGAACTGGATAATCATGCATTCCTGATGGATTTTCAGGAATATCTGGAAGAGTTTTACGCGCGTTATAACGTTGAGCTTATTCGCGCACCAGAAGGGTTCTTCTATTTACGCCCACGTTCCACCACGCTGATCCCTCGTTCCGTCTTGTCGGAACTGGATATGATGGTCGGGAAAATCCTCTGTTATCTCTATCTCAGCCCGGAACGGCTGGCGAATGAGGGGATTTTCACCCAGCAGGAACTGTACGACGAACTGCTCACCCTGGCCGATGAAGCAAAACTGCTGAAACTGGTGAACAACCGTTCAACCGGTTCAGACGTTGACCGTCAGAAGTTGCAGGAGAAAGTACGTTCTTCGCTCAACCGTCTGCGTCGTTTAGGCATGGTGTGGTTTATGGGCCACGACAGCAGCAAGTTTCGCATTACCGAATCGGTGTTCCGCTTCGGAGCCGATGTGCGTGCTGGCGACGATCCCCGTGAAGCACAGCGTCGCCTGATTCGTGATGGCGAAGCAATGCCGATTGAAAATCATCTGCAACTCAACGATGAAACCGAAGAGAATCAGCCAGATAGCGGAGAGGAAGAATAA", + "dna_sequence_length": 705, + "functions": [ + "chromosome condensin MukBEF, MukE localization factor" + ], + "id": "CDS_904", + "location": [ + [ + "NC_000913", + 975622, + "+", + 705 + ] + ], + "md5": "6d629ad3e4196ed207c4990eecfd71f7", + "parent_gene": "", + "protein_md5": "bbf5f34fe903483125d29ab15be37248", + "protein_translation": "MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003138" + ], + [ + "gene_synonym", + "ECK0915" + ], + [ + "gene_synonym", + "EcoGene:EG10618" + ], + [ + "gene_synonym", + "GI:16128891" + ], + [ + "gene_synonym", + "GeneID:945549" + ], + [ + "gene_synonym", + "JW0907" + ], + [ + "gene_synonym", + "NP_415444.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22523" + ], + [ + "gene_synonym", + "b0924" + ], + [ + "gene_synonym", + "mukB" + ] + ], + "dna_sequence": "ATGATTGAACGCGGTAAATTTCGCTCACTGACGCTGATTAACTGGAACGGCTTTTTTGCCCGAACTTTTGACCTTGACGAGCTGGTCACGACGCTTTCTGGCGGTAACGGGGCGGGTAAATCCACCACCATGGCGGCGTTCGTTACGGCGCTGATCCCCGACCTGACCCTGCTGCATTTCCGTAACACTACGGAAGCCGGGGCCACCAGCGGTTCGCGCGATAAAGGTCTGCACGGTAAGCTGAAAGCGGGTGTCTGTTATTCGATGCTCGACACCATTAACTCGCGCCACCAGCGCGTGGTGGTCGGTGTGCGTCTGCAACAGGTTGCCGGACGCGATCGTAAAGTGGATATCAAGCCGTTTGCCATTCAGGGACTGCCGATGTCGGTGCAGCCGACACAGCTGGTGACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTATCGTCTGATCGAAGCTTCGCTGTATGGCGGGATCTCCAGTGCCATTACCCGTTCTCTGCGCGACTACCTGTTGCCAGAAAACAGCGGCGTGCGTAAAGCGTTCCAGGACATGGAAGCGGCGCTGCGTGAAAACCGTATGACGCTGGAAGCGATTCGTGTCACCCAGTCGGACCGCGACCTGTTTAAGCATCTGATCAGCGAAGCCACCAACTACGTGGCGGCGGACTACATGCGTCACGCCAACGAGCGCCGTGTCCATCTCGACAAAGCCCTGGAGTTTCGTCGCGAGCTACATACTTCGCGTCAGCAACTGGCGGCTGAGCAGTACAAACACGTCGATATGGCGCGTGAGCTGGCAGAGCACAACGGTGCCGAAGGCGATCTGGAAGCGGATTATCAGGCGGCCAGTGATCACCTGAACCTGGTGCAAACCGCACTGCGTCAGCAGGAGAAGATCGAACGCTACGAAGCGGATCTCGATGAGCTGCAGATCCGTCTGGAAGAGCAAAATGAAGTGGTGGCAGAAGCCATCGAACGCCAGCAAGAGAATGAGGCTCGTGCGGAAGCTGCCGAACTGGAAGTGGACGAGCTGAAAAGCCAGCTTGCTGACTACCAGCAGGCGCTGGACGTCCAGCAAACGCGCGCGATCCAGTATAACCAGGCGATTGCTGCGCTTAATCGTGCCAAAGAACTGTGCCATCTGCCGGACTTAACCGCCGACTGCGCCGCCGAATGGCTGGAAACCTTCCAGGCGAAAGAGCTGGAAGCGACTGAAAAAATGCTCTCTCTTGAGCAGAAAATGAGCATGGCGCAAACCGCGCACAGCCAGTTTGAGCAGGCTTATCAGCTGGTGGTGGCAATCAACGGCCCACTGGCGCGTAACGAGGCGTGGGATGTCGCTCGCGAACTATTGCGCGAAGGGGTCGATCAGCGTCACCTGGCAGAGCAGGTTCAGCCGCTGCGGATGCGATTAAGCGAACTGGAACAGCGTCTACGCGAGCAGCAAGAAGCTGAGCGTCTGCTGGCAGATTTCTGCAAACGTCAGGGCAAGAATTTTGATATCGACGAACTGGAAGCCCTGCATCAGGAACTGGAAGCACGCATTGCCTCTCTTTCCGATAGCGTGTCTAACGCCCGTGAAGAGCGCATGGCACTGCGCCAGGAGCAGGAACAGCTGCAGTCTCGCATTCAGAGTTTGATGCAGCGTGCGCCGGTTTGGCTGGCAGCGCAAAACAGTCTCAACCAGTTGAGCGAACAGTGCGGCGAAGAGTTTACCTCCAGCCAGGACGTCACCGAATATCTGCAACAGTTGCTGGAGCGTGAGCGAGAGGCGATTGTTGAACGCGATGAAGTGGGCGCGCGCAAAAACGCCGTCGATGAAGAGATCGAACGTTTAAGCCAGCCTGGCGGCTCTGAAGATCAGCGTCTGAACGCGCTGGCGGAGCGTTTTGGTGGTGTGCTGCTGTCAGAAATTTATGACGACGTTAGCCTGGAAGATGCGCCGTACTTCTCAGCGCTGTATGGCCCGTCACGCCACGCCATCGTGGTGCCAGATCTGTCACAGGTAACTGAACACCTGGAAGGCTTGACCGATTGCCCGGAAGATCTCTATCTGATCGAAGGAGATCCGCAGTCATTCGATGACAGCGTGTTCAGCGTTGATGAGCTGGAAAAAGCGGTAGTGGTGAAAATCGCCGATCGTCAGTGGCGTTATTCACGTTTCCCGGAAGTGCCGCTGTTTGGTCGTGCTGCGCGTGAAAGCCGTATTGAAAGCCTCCATGCCGAGCGTGAAGTGCTTTCCGAACGCTTCGCCACGCTCTCCTTTGATGTACAGAAAACTCAGCGTCTGCATCAGGCGTTCAGCCGCTTTATCGGCAGTCATCTGGCGGTTGCGTTTGAGTCTGACCCGGAAGCAGAAATCCGTCAACTGAACAGCCGTCGCGTCGAACTGGAGCGGGCGTTAAGTAATCATGAAAATGATAACCAGCAGCAGCGTATTCAGTTTGAGCAGGCGAAAGAGGGCGTTACGGCGCTGAACCGCATTCTGCCGCGTCTCAACCTGTTGGCTGATGACAGCCTGGCGGATCGCGTCGATGAAATCCGCGAACGTCTGGATGAAGCCCAGGAAGCCGCGCGTTTTGTTCAGCAGTTTGGCAATCAACTGGCGAAACTGGAACCGATTGTTTCGGTATTGCAGAGCGACCCGGAACAGTTCGAACAGTTAAAAGAAGATTACGCGTACTCTCAGCAGATGCAGCGCGATGCCCGTCAGCAGGCGTTTGCCCTGACGGAAGTGGTGCAGCGTCGTGCGCACTTTAGCTATTCTGACTCGGCAGAAATGCTTAGCGGTAACAGCGATCTCAACGAAAAACTGCGTGAACGTCTGGAACAGGCGGAAGCGGAGCGTACCCGCGCTCGCGAAGCGTTGCGCGGTCACGCAGCGCAGTTGAGTCAGTACAACCAGGTGCTGGCTTCGCTGAAAAGTTCTTACGACACCAAAAAAGAGCTACTCAACGATCTGCAACGTGAATTGCAGGATATCGGCGTGCGTGCTGATAGCGGGGCAGAAGAGCGGGCGCGTATTCGCCGTGACGAGCTGCATGCGCAACTGAGCAATAACCGTTCACGCCGCAATCAACTGGAAAAAGCGCTTACCTTCTGCGAAGCGGAGATGGACAACCTGACCCGCAAACTGCGCAAGCTGGAGCGGGATTACTTTGAGATGCGCGAGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTATTCGTCAGGATATTATTCGTACCGATGATCCGGTGGAAGCTATCGAACAGATGGAGATTGAACTTAGCCGTCTGACCGAAGAATTAACCTCCCGTGAACAGAAACTGGCGATCAGTTCCCGCAGCGTGGCGAACATCATTCGCAAAACCATTCAGCGCGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGAAGCGCTGGCGAAACTGTATCAACGTCTTAACCCGCAGATTGATATGGGGCAGCGCACGCCGCAGACCATCGGTGAAGAACTGCTGGATTACCGCAACTATCTGGAAATGGAAGTTGAGGTTAACCGTGGTTCCGATGGCTGGCTGCGCGCAGAGTCTGGTGCATTGTCGACCGGTGAGGCGATTGGTACCGGTATGTCGATTCTGGTGATGGTGGTACAAAGCTGGGAAGATGAATCTCGCCGCCTGCGCGGTAAAGATATCTCTCCTTGCCGCCTGCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAA", + "dna_sequence_length": 4461, + "functions": [ + "chromosome condensin MukBEF, ATPase and DNA-binding subunit" + ], + "id": "CDS_905", + "location": [ + [ + "NC_000913", + 976326, + "+", + 4461 + ] + ], + "md5": "177b4f1d4497be7ee9c60f7a013ebc81", + "parent_gene": "", + "protein_md5": "6e4e7443df3aef6e1e4848da69fd8585", + "protein_translation": "MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS", + "protein_translation_length": 1486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003142" + ], + [ + "gene_synonym", + "ECK0916" + ], + [ + "gene_synonym", + "EcoGene:EG11253" + ], + [ + "gene_synonym", + "GI:16128892" + ], + [ + "gene_synonym", + "GeneID:945541" + ], + [ + "gene_synonym", + "JW0908" + ], + [ + "gene_synonym", + "NP_415445.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22525" + ], + [ + "gene_synonym", + "b0925" + ], + [ + "gene_synonym", + "ldtD" + ], + [ + "gene_synonym", + "ycbB" + ] + ], + "dna_sequence": "ATGTTGCTTAATATGATGTGTGGTCGTCAGCTGTCGGCAATCAGTTTGTGCCTGGCCGTAACATTCGCTCCACTGTTCAATGCGCAGGCCGATGAGCCTGAAGTAATCCCTGGCGACAGCCCGGTGGCTGTCAGTGAACAGGGCGAGGCACTGCCGCAGGCGCAAGCCACGGCAATAATGGCGGGGATCCAGCCATTGCCTGAAGGTGCGGCAGAAAAAGCCCGCACGCAAATCGAATCTCAATTACCCGCAGGTTACAAGCCGGTTTATCTTAACCAGCTTCAACTGTTGTATGCCGCACGCGATATGCAACCCATGTGGGAAAACCGTGATGCTGTTAAAGCCTTCCAGCAACAGCTGGCAGAGGTGGCGATTGCCGGTTTCCAGCCGCAGTTTAATAAATGGGTAGAGTTACTGACCGATCCTGGTGTTAACGGGATGGCACGCGACGTGGTGCTCTCTGATGCGATGATGGGCTATCTCCATTTCATTGCAAATATTCCGGTCAAAGGCACTCGCTGGCTATATAGCAGTAAACCTTATGCACTTGCAACGCCGCCGCTCTCGGTGATTAACCAATGGCAGCTGGCGCTGGATAAAGGTCAATTGCCTACGTTTGTTGCAGGACTGGCACCGCAGCATCCGCAATATGCGGCGATGCATGAATCGTTACTGGCCTTACTCTGTGACACCAAACCGTGGCCCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTAAGCCGATGGATAAGCAAACGACGTCTCGTAGTAAACCTGCGCCTGCCGTTCGCGCCGCCTACGATAATGAACTGGTGGAAGCCGTTAAACGTTTTCAGGCATGGCAAGGATTGGGGGCAGATGGTGCTATTGGCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCCTATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGATTGACCCATGGCAGGTTGACTGGTCTACAATCACGGCCTCGAATTTACCGTTCCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAGTGAATAAAGCTTCCGATCTGGCGAATATGCTGTTGCAGGATGCAGGCTGGAATGACAAACGTATTTCTGATGCGCTGAAGCAGGGTGATACACGTTACGTCAATATTCGGCAGTCGATTCCGGTGAATCTCTACTACCTGACGGCCTTTGTTGGTGCAGATGGTCGTACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAA", + "dna_sequence_length": 1848, + "functions": [ + "murein L,D-transpeptidase" + ], + "id": "CDS_906", + "location": [ + [ + "NC_000913", + 981047, + "+", + 1848 + ] + ], + "md5": "aa7413b36adecbe019709c0f56a84d39", + "parent_gene": "", + "protein_md5": "0fde8fae184322b4185b396c9a1393ce", + "protein_translation": "MLLNMMCGRQLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR", + "protein_translation_length": 615, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003145" + ], + [ + "gene_synonym", + "ECK0917" + ], + [ + "gene_synonym", + "EcoGene:EG13703" + ], + [ + "gene_synonym", + "GI:16128893" + ], + [ + "gene_synonym", + "GeneID:945538" + ], + [ + "gene_synonym", + "JW0909" + ], + [ + "gene_synonym", + "NP_415446.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB06" + ], + [ + "gene_synonym", + "b0926" + ], + [ + "gene_synonym", + "ycbK" + ] + ], + "dna_sequence": "ATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGTTTTTCGATGGCAGAGGCTATATTCAGGAAGAATTGGCAAAACTTAACCATTTTTTCCGCGATTACCGCGCGAACAAAATAAAGTCCATCGACCCAGGATTATTCGACCAGTTGTATCGCCTGCAAGGGTTGTTAGGCACGCGCAAACCGGTGCAACTCATTTCCGGTTATCGTTCTATTGATACCAACAATGAACTACGCGCCCGCAGCCGTGGAGTAGCGAAGAAAAGCTATCACACTAAAGGCCAGGCGATGGATTTCCATATTGAAGGTATCGCGTTAAGCAATATTCGCAAAGCCGCGTTATCTATGCGCGCAGGTGGTGTAGGATATTATCCACGTAGTAACTTTGTGCATATTGATACCGGGCCAGCACGGCACTGGTAG", + "dna_sequence_length": 549, + "functions": [ + "M15A protease-related family periplasmic protein" + ], + "id": "CDS_907", + "location": [ + [ + "NC_000913", + 983075, + "+", + 549 + ] + ], + "md5": "39e78dbb6952899dbee2be12906fcfd8", + "parent_gene": "", + "protein_md5": "679f9d441d38637cd2f65af2dc47cc11", + "protein_translation": "MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003147" + ], + [ + "gene_synonym", + "ECK0918" + ], + [ + "gene_synonym", + "EcoGene:EG13704" + ], + [ + "gene_synonym", + "GI:16128894" + ], + [ + "gene_synonym", + "GeneID:945551" + ], + [ + "gene_synonym", + "JW0910" + ], + [ + "gene_synonym", + "NP_415447.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75849" + ], + [ + "gene_synonym", + "b0927" + ], + [ + "gene_synonym", + "ycbL" + ] + ], + "dna_sequence": "ATGAACTATCGTATTATTCCGGTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACATTACGGCGTGCCGGTTTTCGGCCCGGAAAAAGAAGATGAGTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACGAAGGCGATACCATCAGCATAGGGAATGTGACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTAGGGCGCAGTGACTTCCCGCGTGGCGATCATAATCAACTGATTTCTTCAATCAAAGATAAATTGCTGCCACTGGGGGATGACGTGATATTTATTCCGGGTCACGGACCATTATCCACACTTGGTTATGAACGCCTGCATAATCCCTTCCTGCAAGACGAAATGCCCGTCTGGTAA", + "dna_sequence_length": 648, + "functions": [ + "putative metal-binding enzyme" + ], + "id": "CDS_908", + "location": [ + [ + "NC_000913", + 983650, + "+", + 648 + ] + ], + "md5": "4d05d9c2f65adcf615a9525da93f014c", + "parent_gene": "", + "protein_md5": "efb6fc75764a33cf4b11b58cea72ca76", + "protein_translation": "MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDSGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEMPVW", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003150" + ], + [ + "gene_synonym", + "ECK0919" + ], + [ + "gene_synonym", + "EcoGene:EG10096" + ], + [ + "gene_synonym", + "GI:16128895" + ], + [ + "gene_synonym", + "GeneID:945553" + ], + [ + "gene_synonym", + "JW0911" + ], + [ + "gene_synonym", + "NP_415448.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00509" + ], + [ + "gene_synonym", + "aspC" + ], + [ + "gene_synonym", + "b0928" + ] + ], + "dna_sequence": "ATGTTTGAGAACATTACCGCCGCTCCTGCCGACCCGATTCTGGGCCTGGCCGATCTGTTTCGTGCCGATGAACGTCCCGGCAAAATTAACCTCGGGATTGGTGTCTATAAAGATGAGACGGGCAAAACCCCGGTACTGACCAGCGTGAAAAAGGCTGAACAGTATCTGCTCGAAAATGAAACCACCAAAAATTACCTCGGCATTGACGGCATCCCTGAATTTGGTCGCTGCACTCAGGAACTGCTGTTTGGTAAAGGTAGCGCCCTGATCAATGACAAACGTGCTCGCACGGCACAGACTCCGGGGGGCACTGGCGCACTACGCGTGGCTGCCGATTTCCTGGCAAAAAATACCAGCGTTAAGCGTGTGTGGGTGAGCAACCCAAGCTGGCCGAACCATAAGAGCGTCTTTAACTCTGCAGGTCTGGAAGTTCGTGAATACGCTTATTATGATGCGGAAAATCACACTCTTGACTTCGATGCACTGATTAACAGCCTGAATGAAGCTCAGGCTGGCGACGTAGTGCTGTTCCATGGCTGCTGCCATAACCCAACCGGTATCGACCCTACGCTGGAACAATGGCAAACACTGGCACAACTCTCCGTTGAGAAAGGCTGGTTACCGCTGTTTGACTTCGCTTACCAGGGTTTTGCCCGTGGTCTGGAAGAAGATGCTGAAGGACTGCGCGCTTTCGCGGCTATGCATAAAGAGCTGATTGTTGCCAGTTCCTACTCTAAAAACTTTGGCCTGTACAACGAGCGTGTTGGCGCTTGTACTCTGGTTGCTGCCGACAGTGAAACCGTTGATCGCGCATTCAGCCAAATGAAAGCGGCGATTCGCGCTAACTACTCTAACCCACCAGCACACGGCGCTTCTGTTGTTGCCACCATCCTGAGCAACGATGCGTTACGTGCGATTTGGGAACAAGAGCTGACTGATATGCGCCAGCGTATTCAGCGTATGCGTCAGTTGTTCGTCAATACGCTGCAGGAAAAAGGCGCAAACCGCGACTTCAGCTTTATCATCAAACAGAACGGCATGTTCTCCTTCAGTGGCCTGACAAAAGAACAAGTGCTGCGTCTGCGCGAAGAGTTTGGCGTATATGCGGTTGCTTCTGGTCGCGTAAATGTGGCCGGGATGACACCAGATAACATGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAA", + "dna_sequence_length": 1191, + "functions": [ + "aspartate aminotransferase, PLP-dependent" + ], + "id": "CDS_909", + "location": [ + [ + "NC_000913", + 985709, + "-", + 1191 + ] + ], + "md5": "ecef09c97262e94772a0d74d88658dc2", + "parent_gene": "", + "protein_md5": "378fb80b3f4935dbe3a309d2cca355f1", + "protein_translation": "MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003153" + ], + [ + "gene_synonym", + "ECK0920" + ], + [ + "gene_synonym", + "EcoGene:EG10671" + ], + [ + "gene_synonym", + "GI:16128896" + ], + [ + "gene_synonym", + "GeneID:945554" + ], + [ + "gene_synonym", + "JW0912" + ], + [ + "gene_synonym", + "NP_415449.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02931" + ], + [ + "gene_synonym", + "b0929" + ], + [ + "gene_synonym", + "cmlB" + ], + [ + "gene_synonym", + "coa" + ], + [ + "gene_synonym", + "cry" + ], + [ + "gene_synonym", + "nfxB?" + ], + [ + "gene_synonym", + "ompF" + ], + [ + "gene_synonym", + "tolF" + ] + ], + "dna_sequence": "ATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTCCAAGGGTAACGGTGAAAACAGTTACGGTGGCAATGGCGACATGACCTATGCCCGTCTTGGTTTTAAAGGGGAAACTCAAATCAATTCCGATCTGACCGGTTATGGTCAGTGGGAATATAACTTCCAGGGTAACAACTCTGAAGGCGCTGACGCTCAAACTGGTAACAAAACGCGTCTGGCATTCGCGGGTCTTAAATACGCTGACGTTGGTTCTTTCGATTACGGCCGTAACTACGGTGTGGTTTATGATGCACTGGGTTACACCGATATGCTGCCAGAATTTGGTGGTGATACTGCATACAGCGATGACTTCTTCGTTGGTCGTGTTGGCGGCGTTGCTACCTATCGTAACTCCAACTTCTTTGGTCTGGTTGATGGCCTGAACTTCGCTGTTCAGTACCTGGGTAAAAACGAGCGTGACACTGCACGCCGTTCTAACGGCGACGGTGTTGGCGGTTCTATCAGCTACGAATACGAAGGCTTTGGTATCGTTGGTGCTTATGGTGCAGCTGACCGTACCAACCTGCAAGAAGCTCAACCTCTTGGCAACGGTAAAAAAGCTGAACAGTGGGCTACTGGTCTGAAGTACGACGCGAACAACATCTACCTGGCAGCGAACTACGGTGAAACCCGTAACGCTACGCCGATCACTAATAAATTTACAAACACCAGCGGCTTCGCCAACAAAACGCAAGACGTTCTGTTAGTTGCGCAATACCAGTTCGATTTCGGTCTGCGTCCGTCCATCGCTTACACCAAATCTAAAGCGAAAGACGTAGAAGGTATCGGTGATGTTGATCTGGTGAACTACTTTGAAGTGGGCGCAACCTACTACTTCAACAAAAACATGTCCACCTATGTTGACTACATCATCAACCAGATCGATTCTGACAACAAACTGGGCGTAGGTTCAGACGACACCGTTGCTGTGGGTATCGTTTACCAGTTCTAA", + "dna_sequence_length": 1089, + "functions": [ + "outer membrane porin 1a (Ia;b;F)" + ], + "id": "CDS_910", + "location": [ + [ + "NC_000913", + 986982, + "-", + 1089 + ] + ], + "md5": "f3c7310e860fd594ba07c21fe0efdb15", + "parent_gene": "", + "protein_md5": "3e98eb34c28122df786da07d590a3ad9", + "protein_translation": "MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003162" + ], + [ + "gene_synonym", + "ECK0921" + ], + [ + "gene_synonym", + "EcoGene:EG10094" + ], + [ + "gene_synonym", + "GI:16128897" + ], + [ + "gene_synonym", + "GeneID:945555" + ], + [ + "gene_synonym", + "JW0913" + ], + [ + "gene_synonym", + "NP_415450.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8M0" + ], + [ + "gene_synonym", + "asnS" + ], + [ + "gene_synonym", + "b0930" + ], + [ + "gene_synonym", + "lcs" + ], + [ + "gene_synonym", + "tss" + ] + ], + "dna_sequence": "ATGAGCGTTGTGCCTGTAGCCGACGTACTCCAGGGCCGTGTAGCCGTTGACAGCGAAGTCACCGTGCGCGGATGGGTACGTACCCGCCGAGATTCAAAAGCTGGCATCTCCTTCCTCGCCGTTTATGACGGTTCCTGCTTTGATCCTGTACAGGCTGTCATCAATAATTCTCTGCCCAATTACAATGAAGACGTCCTGCGTCTGACCACCGGCTGCTCGGTCATTGTGACGGGTAAAGTCGTGGCGTCGCCGGGCCAGGGGCAACAATTTGAAATTCAGGCCAGCAAGGTTGAAGTTGCTGGTTGGGTTGAAGATCCAGACACTTACCCGATGGCGGCAAAACGCCACAGCATTGAGTATCTGCGTGAAGTCGCTCACCTGCGTCCGCGCACAAACCTGATTGGTGCCGTCGCGCGCGTTCGCCATACGCTGGCGCAGGCGCTGCATCGCTTCTTTAACGAGCAGGGATTCTTCTGGGTTTCAACGCCACTGATTACCGCATCTGATACCGAAGGTGCAGGCGAAATGTTCCGCGTTTCTACGCTGGATCTGGAAAACCTGCCGCGTAACGATCAGGGCAAAGTGGATTTCGACAAAGACTTCTTTGGTAAAGAGTCTTTCCTGACCGTATCTGGCCAGTTGAACGGCGAAACCTACGCTTGCGCATTGTCCAAAATTTATACCTTCGGCCCGACTTTCCGTGCTGAAAACTCCAACACCAGCCGTCACCTGGCGGAATTCTGGATGCTGGAGCCGGAAGTGGCGTTTGCTAACCTGAACGATATTGCGGGTCTGGCTGAAGCCATGCTGAAATATGTCTTCAAAGCGGTTCTCGAAGAACGCGCTGACGACATGAAATTCTTCGCTGAACGCGTAGATAAAGATGCCGTTTCACGTCTGGAACGCTTCATTGAAGCCGATTTTGCGCAGGTGGATTATACCGACGCAGTGACCATTCTCGAAAACTGCGGCAGGAAGTTTGAAAACCCGGTTTACTGGGGAGTCGATCTCTCTTCTGAGCATGAGCGTTATCTGGCGGAAGAACACTTTAAAGCACCGGTAGTGGTTAAAAACTATCCGAAAGATATTAAAGCGTTCTATATGCGCCTTAACGAAGACGGTAAAACCGTTGCGGCTATGGACGTTCTGGCTCCGGGCATCGGTGAGATCATTGGTGGCTCCCAGCGTGAAGAACGTCTGGACGTGCTGGACGAGCGTATGCTGGAAATGGGCCTGAATAAAGAAGATTACTGGTGGTATCGCGATCTGCGTCGCTACGGTACTGTTCCGCATTCAGGTTTCGGTCTTGGTTTTGAACGTCTGATTGCTTACGTAACTGGCGTGCAAAACGTACGTGATGTGATTCCGTTCCCACGTACTCCGCGTAACGCCAGCTTCTAA", + "dna_sequence_length": 1401, + "functions": [ + "asparaginyl tRNA synthetase" + ], + "id": "CDS_911", + "location": [ + [ + "NC_000913", + 988985, + "-", + 1401 + ] + ], + "md5": "b8b843482ba333eb18a8471347376bad", + "parent_gene": "", + "protein_md5": "2d207fb81116741552eeb7ee964cf312", + "protein_translation": "MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003167" + ], + [ + "gene_synonym", + "ECK0922" + ], + [ + "gene_synonym", + "EcoGene:EG10742" + ], + [ + "gene_synonym", + "GI:16128898" + ], + [ + "gene_synonym", + "GeneID:946648" + ], + [ + "gene_synonym", + "JW0914" + ], + [ + "gene_synonym", + "NP_415451.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18133" + ], + [ + "gene_synonym", + "b0931" + ], + [ + "gene_synonym", + "pncB" + ] + ], + "dna_sequence": "ATGACACAATTCGCTTCTCCTGTTCTGCACTCGTTGCTGGATACAGATGCTTATAAGTTGCATATGCAGCAAGCCGTGTTTCATCACTATTACGATGTGCATGTCGCGGCGGAGTTTCGTTGCCGAGGTGACGATCTGCTGGGTATTTATGCCGATGCTATTCGTGAACAGGTTCAGGCGATGCAGCACCTGCGCCTGCAGGATGATGAATATCAGTGGCTTTCTGCCCTGCCTTTCTTTAAGGCCGACTATCTTAACTGGTTACGCGAGTTCCGCTTTAACCCGGAACAAGTCACCGTGTCCAACGATAATGGCAAGCTGGATATTCGTTTAAGCGGCCCGTGGCGTGAAGTCATCCTCTGGGAAGTTCCTTTGCTGGCGGTTATCAGTGAAATGGTACATCGCTATCGCTCACCGCAGGCCGACGTTGCGCAAGCCCTCGACACGCTGGAAAGCAAATTAGTCGACTTCTCGGCGTTAACCGCCGGTCTTGATATGTCGCGCTTCCATCTGATGGATTTTGGCACCCGTCGCCGTTTTTCTCGCGAAGTACAAGAAACCATCGTTAAGCGTCTGCAACAGGAATCCTGGTTTGTGGGCACCAGCAACTACGATCTGGCGCGTCGGCTTTCCCTCACGCCGATGGGAACACAGGCACACGAATGGTTCCAGGCACATCAGCAAATCAGCCCGGATCTAGCCAACAGCCAGCGAGCTGCACTTGCTGCCTGGCTGGAAGAGTATCCCGACCAACTTGGCATTGCATTAACCGACTGCATCACTATGGATGCTTTCCTGCGTGATTTCGGTGTCGAGTTCGCTAGTCGGTATCAGGGCCTGCGTCATGACTCTGGCGACCCGGTTGAATGGGGTGAAAAAGCCATTGCACATTATGAAAAGCTGGGAATTGATCCACAGAGTAAAACGCTGGTTTTCTCTGACAATCTGGATTTACGCAAAGCGGTTGAGCTATACCGCCACTTCTCTTCCCGCGTGCAATTAAGTTTTGGTATTGGGACTCGCCTGACCTGCGATATCCCCCAGGTAAAACCCCTGAATATTGTCATTAAGTTGGTAGAGTGTAACGGTAAACCGGTGGCGAAACTTTCTGACAGCCCTGGCAAAACTATCTGCCATGATAAAGCGTTTGTTCGGGCGCTGCGCAAAGCGTTCGACCTTCCGCATATTAAAAAAGCCAGTTAA", + "dna_sequence_length": 1203, + "functions": [ + "nicotinate phosphoribosyltransferase" + ], + "id": "CDS_912", + "location": [ + [ + "NC_000913", + 990356, + "-", + 1203 + ] + ], + "md5": "ad76b7c5e4dc01edba3ed2014a351290", + "parent_gene": "", + "protein_md5": "514f423214af8c387dd808100ce010a7", + "protein_translation": "MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003171" + ], + [ + "gene_synonym", + "ECK0923" + ], + [ + "gene_synonym", + "EcoGene:EG10696" + ], + [ + "gene_synonym", + "GI:16128899" + ], + [ + "gene_synonym", + "GeneID:947253" + ], + [ + "gene_synonym", + "JW0915" + ], + [ + "gene_synonym", + "NP_415452.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04825" + ], + [ + "gene_synonym", + "b0932" + ], + [ + "gene_synonym", + "pepN" + ] + ], + "dna_sequence": "ATGACTCAACAGCCACAAGCCAAATACCGTCACGATTATCGTGCGCCGGATTACCAGATTACTGATATTGACTTGACCTTTGACCTCGACGCGCAAAAGACGGTCGTTACCGCGGTCAGCCAGGCTGTCCGTCATGGTGCATCAGATGCTCCCCTTCGTCTCAACGGCGAAGACCTCAAACTGGTTTCTGTTCATATTAATGATGAGCCGTGGACCGCCTGGAAAGAAGAAGAGGGCGCACTGGTTATCAGTAATTTGCCGGAGCGTTTTACGCTTAAGATCATTAATGAAATAAGCCCGGCGGCGAATACCGCGCTGGAAGGGCTTTATCAGTCAGGCGATGCGCTTTGCACCCAGTGTGAAGCCGAAGGTTTCCGCCATATTACGTATTATCTCGACCGCCCGGACGTGCTGGCGCGTTTTACCACCAAAATTATTGCCGATAAAATCAAATATCCCTTCCTGCTTTCCAATGGTAACCGCGTTGCGCAAGGCGAACTGGAAAACGGACGCCATTGGGTACAGTGGCAGGACCCGTTCCCGAAACCGTGCTACCTGTTTGCGCTGGTGGCAGGCGACTTTGATGTACTGCGCGATACCTTTACCACGCGTTCTGGTCGCGAAGTAGCACTGGAGCTGTACGTCGATCGCGGCAACCTTGATCGCGCGCCGTGGGCGATGACCTCGCTGAAAAACTCCATGAAATGGGATGAAGAACGCTTTGGCCTGGAGTATGACCTCGACATCTATATGATCGTCGCGGTGGATTTCTTCAATATGGGCGCAATGGAGAATAAGGGGCTGAATATCTTTAACTCCAAATATGTGCTGGCCCGCACCGACACCGCCACCGACAAAGATTACCTCGATATTGAACGCGTTATCGGCCATGAATATTTCCATAACTGGACCGGTAACCGAGTGACCTGTCGCGACTGGTTCCAGCTCAGCCTGAAAGAAGGTTTAACCGTCTTCCGCGATCAGGAGTTCAGCTCTGACCTTGGTTCCCGCGCAGTTAACCGCATCAATAATGTACGCACCATGCGCGGATTGCAGTTTGCAGAAGACGCCAGCCCGATGGCGCACCCGATCCGCCCGGATATGGTCATTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAACTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACACCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTATGATAACGAAGGCAAAGTGATCCCGTTGCAGAAAGGCGGTCATCCGGTGAATTCCGTGCTGAACGTCACTCAGGCGGAACAGACCTTTGTCTTTGATAATGTCTACTTCCAGCCGGTGCCTGCGCTGCTGTGCGAATTCTCTGCGCCAGTGAAACTGGAATATAAGTGGAGCGATCAGCAACTGACCTTCCTGATGCGTCATGCGCGTAATGATTTCTCCCGCTGGGATGCGGCGCAAAGTTTGCTGGCAACCTACATCAAGCTGAACGTCGCGCGTCATCAGCAAGGTCAGCCGCTGTCTCTGCCGGTGCATGTGGCTGATGCTTTCCGCGCGGTACTGCTTGATGAGAAGATTGATCCAGCGCTGGCGGCAGAAATCCTGACGCTGCCTTCTGTCAATGAAATGGCTGAATTGTTCGATATCATCGACCCGATTGCTATTGCCGAAGTACGCGAAGCACTCACTCGTACTCTGGCGACTGAACTGGCGGATGAGCTACTGGCTATTTACAACGCGAATTACCAGAGCGAGTACCGTGTTGAGCATGAAGATATTGCAAAACGCACTCTGCGTAATGCCTGCCTGCGTTTCCTCGCTTTTGGTGAAACGCATCTGGCTGATGTGCTGGTGAGCAAGCAGTTCCACGAAGCAAACAATATGACTGATGCGCTGGCGGCGCTTTCTGCGGCGGTTGCCGCACAGCTGCCTTGCCGTGACGCGCTGATGCAGGAGTACGACGACAAGTGGCATCAGAACGGTCTGGTGATGGATAAATGGTTTATCCTGCAAGCCACCAGCCCGGCGGCGAATGTGCTGGAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTGGCGCGTTTGCGGGCAGCAATCCGGCAGCGTTCCATGCCGAAGATGGCAGCGGTTACCTGTTCCTGGTGGAAATGCTTACCGACCTCAACAGCCGTAACCCGCAGGTGGCTTCACGTCTGATTGAACCGCTGATTCGCCTGAAACGTTACGATGCCAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGA", + "dna_sequence_length": 2613, + "functions": [ + "aminopeptidase N" + ], + "id": "CDS_913", + "location": [ + [ + "NC_000913", + 990622, + "+", + 2613 + ] + ], + "md5": "a40999945cc738f743bcf97526f3ab16", + "parent_gene": "", + "protein_md5": "8a2d4bdfd18bf8b30cf5426d05a5b344", + "protein_translation": "MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA", + "protein_translation_length": 870, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003173" + ], + [ + "gene_synonym", + "ECK0924" + ], + [ + "gene_synonym", + "EcoGene:EG12358" + ], + [ + "gene_synonym", + "GI:16128900" + ], + [ + "gene_synonym", + "GeneID:947220" + ], + [ + "gene_synonym", + "JW0916" + ], + [ + "gene_synonym", + "NP_415453.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAI1" + ], + [ + "gene_synonym", + "b0933" + ], + [ + "gene_synonym", + "ssuB" + ], + [ + "gene_synonym", + "ycbE" + ] + ], + "dna_sequence": "ATGAATACTGCTCGTCTGAACCAGGGCACGCCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCTGAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGTGGTGGCAAAAGTACCCTGCTGCGCCTGCTGGCAGGTCTGGAAACGCCAACCGCAGGCGATGTGTTAGCGGGCACCACACCGCTGGCTGAAATTCAGGAAGACACGCGAATGATGTTTCAGGATGCGCGTCTGCTACCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGGCCAGTGGCGCGATGCCGCACGTCGAGCGTTGGCTGCGGTAGGACTGGAGAATCGCGCAGGGGAATGGCCTGCCGCACTTTCTGGCGGGCAGAAACAGCGAGTGGCGCTGGCAAGAGCGTTGATTCATCGACCGGGATTATTGTTGCTTGATGAACCGCTCGGGGCGCTGGACGCCTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCACTTTGGCAGGAGCACGGCTTTACCGTACTGTTGGTGACGCATGATGTGAGCGAAGCGGTAGCGATGGCTGACCGGGTGCTGTTAATTGAAGAGGGAAAAATTGGTCTGGATTTGACAGTGGATATCCCCCGTCCGCGTCGATTAGGGTCGGTGCGATTAGCGGAGCTGGAAGCGGAGGTGTTGCAACGGGTGATGCAACGTGGTGAATCTGAAACTCGCCTGAGAAAACAGGGGTAA", + "dna_sequence_length": 768, + "functions": [ + "aliphatic sulfonate ABC transporter ATPase" + ], + "id": "CDS_914", + "location": [ + [ + "NC_000913", + 994044, + "-", + 768 + ] + ], + "md5": "0be0c2688458da76af228fbc0b8e93e2", + "parent_gene": "", + "protein_md5": "25bd22e9b5cb6c0d4d982cb7db274698", + "protein_translation": "MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQG", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003175" + ], + [ + "gene_synonym", + "ECK0925" + ], + [ + "gene_synonym", + "EcoGene:EG13705" + ], + [ + "gene_synonym", + "GI:90111188" + ], + [ + "gene_synonym", + "GeneID:947216" + ], + [ + "gene_synonym", + "JW5121" + ], + [ + "gene_synonym", + "NP_415454.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75851" + ], + [ + "gene_synonym", + "b0934" + ], + [ + "gene_synonym", + "ssuC" + ], + [ + "gene_synonym", + "ycbM" + ] + ], + "dna_sequence": "ATGGCAACGCCAGTGAAGAAGTGGTTATTGCGCGTTGCCCCCTGGTTTTTACCGGTGGGCATCGTGGCGGTGTGGCAACTGGCCTCCTCGGTTGGCTGGCTGTCGACGCGTATTTTGCCTTCACCGGAAGGAGTGGTGACGGCGTTCTGGACGCTCTCCGCCAGCGGCGAACTGTGGCAGCATCTGGCGATCAGCTCCTGGCGGGCGCTGATTGGCTTTTCAATTGGCGGATCGCTGGGGTTGATTTTGGGACTGATTAGCGGGCTATCTCGCTGGGGAGAACGGCTGCTGGATACCTCAATTCAGATGTTGCGCAACGTGCCGCATCTGGCGCTGATCCCGCTGGTGATTTTGTGGTTTGGCATTGATGAATCCGCAAAAATCTTTCTGGTGGCGCTCGGTACGCTATTCCCCATTTATATCAACACCTGGCATGGCATCCGTAATATCGATCGCGGGTTGGTGGAGATGGCGCGTAGCTATGGATTATCCGGCATACCGCTGTTTATCCATGTGATCCTGCCTGGTGCCCTGCCCTCAATTATGGTCGGCGTGCGTTTTGCGTTGGGCCTGATGTGGCTGACGCTGATTGTTGCCGAAACCATTTCTGCCAATTCAGGCATTGGTTATCTGGCGATGAATGCGCGGGAGTTTTTGCAAACGGACGTGGTGGTAGTCGCTATTATTCTTTACGCCCTGCTCGGCAAACTGGCTGACGTCAGCGCGCAGCTGTTAGAGCGCCTCTGGTTGCGCTGGAACCCGGCTTATCATTTGAAGGAGGCCACGGTATGA", + "dna_sequence_length": 792, + "functions": [ + "aliphatic sulfonate ABC transporter permease" + ], + "id": "CDS_915", + "location": [ + [ + "NC_000913", + 994832, + "-", + 792 + ] + ], + "md5": "f027ab2d2edd848e8f7c1d8489ec5574", + "parent_gene": "", + "protein_md5": "db0e6bc8c6fbb2d443fc241427af538d", + "protein_translation": "MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003178" + ], + [ + "gene_synonym", + "ECK0926" + ], + [ + "gene_synonym", + "EcoGene:EG13706" + ], + [ + "gene_synonym", + "GI:16128902" + ], + [ + "gene_synonym", + "GeneID:945557" + ], + [ + "gene_synonym", + "JW0918" + ], + [ + "gene_synonym", + "NP_415455.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P80645" + ], + [ + "gene_synonym", + "b0935" + ], + [ + "gene_synonym", + "ssi6" + ], + [ + "gene_synonym", + "ssuD" + ], + [ + "gene_synonym", + "ycbN" + ] + ], + "dna_sequence": "ATGAGTCTGAATATGTTCTGGTTTTTACCGACCCACGGTGACGGGCATTATCTGGGAACGGAAGAAGGTTCACGCCCGGTTGATCACGGTTATCTGCAACAAATTGCGCAAGCGGCGGATCGTCTTGGCTATACCGGTGTGCTAATTCCAACGGGGCGCTCCTGCGAAGATGCGTGGCTGGTTGCCGCATCGATGATCCCGGTGACGCAGCGGCTGAAGTTTCTTGTCGCCCTGCGTCCCAGCGTAACCTCACCTACCGTTGCCGCCCGCCAGGCCGCCACGCTTGACCGTCTCTCAAATGGACGTGCGTTGTTTAACCTGGTCACAGGCAGCGATCCACAAGAGCTGGCAGGCGACGGAGTGTTCCTTGATCATAGCGAGCGCTACGAAGCCTCGGCGGAATTTACCCAGGTCTGGCGGCGTTTATTGCAGAGAGAAACCGTCGATTTCAACGGTAAACATATTCATGTGCGCGGAGCAAAACTGCTCTTCCCGGCGATTCAACAGCCGTATCCGCCACTTTACTTTGGCGGATCGTCAGATGTCGCCCAGGAGCTGGCGGCAGAACAGGTTGATCTCTACCTCACCTGGGGCGAACCGCCGGAACTGGTTAAAGAGAAAATCGAACAAGTGCGGGCGAAAGCTGCCGCGCATGGACGCAAAATTCGTTTCGGTATTCGTCTGCATGTGATTGTTCGTGAAACTAACGACGAAGCGTGGCAGGCCGCCGAGCGGTTAATCTCGCATCTTGATGATGAAACTATCGCCAAAGCACAGGCCGCATTCGCCCGGACGGATTCCGTAGGGCAACAGCGAATGGCGGCGTTACATAACGGCAAGCGCGACAATCTGGAGATCAGCCCCAATTTATGGGCGGGCGTTGGCTTAGTGCGCGGCGGTGCCGGGACGGCGCTGGTGGGCGATGGTCCTACGGTCGCTGCGCGAATCAACGAATATGCCGCGCTTGGCATCGACAGTTTTGTGCTTTCGGGCTATCCGCATCTGGAAGAAGCGTATCGGGTTGGCGAGTTGCTGTTCCCGCTTCTGGATGTCGCCATCCCGGAAATTCCCCAGCCGCAGCCGCTGAATCCGCAAGGCGAAGCGGTGGCGAATGATTTTATCCCCCGTAAAGTCGCGCAAAGCTAA", + "dna_sequence_length": 1146, + "functions": [ + "alkanesulfonate monooxygenase, FMNH(2)-dependent" + ], + "id": "CDS_916", + "location": [ + [ + "NC_000913", + 995988, + "-", + 1146 + ] + ], + "md5": "ee6f259281e0720173a04c5c7cfa0f92", + "parent_gene": "", + "protein_md5": "878cc4667e4f7c30d61cfb1f985a5b47", + "protein_translation": "MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAKLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPLLDVAIPEIPQPQPLNPQGEAVANDFIPRKVAQS", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003180" + ], + [ + "gene_synonym", + "ECK0927" + ], + [ + "gene_synonym", + "EcoGene:EG13707" + ], + [ + "gene_synonym", + "GI:90111189" + ], + [ + "gene_synonym", + "GeneID:945560" + ], + [ + "gene_synonym", + "JW0919" + ], + [ + "gene_synonym", + "NP_415456.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75853" + ], + [ + "gene_synonym", + "b0936" + ], + [ + "gene_synonym", + "ssuA" + ], + [ + "gene_synonym", + "ycbO" + ] + ], + "dna_sequence": "ATGCGTAACATCATTAAACTGGCGCTGGCGGGATTGCTTAGCGTCTCTACTTTTGCGGTTGCTGCAGAATCCTCGCCTGAAGCGTTACGTATAGGCTATCAGAAAGGCAGTATTGGTATGGTGCTGGCAAAAAGCCACCAGTTACTGGAAAAACGCTATCCGGAATCAAAAATCTCCTGGGTGGAGTTCCCCGCGGGTCCGCAAATGTTGGAAGCGTTAAACGTTGGCAGTATTGATCTCGGCAGTACCGGGGATATTCCGCCAATCTTTGCCCAGGCTGCCGGGGCTGATTTGGTGTACGTGGGCGTCGAGCCACCGAAGCCCAAAGCCGAAGTGATTCTGGTGGCAGAAAACAGCCCGATCAAAACCGTAGCCGATCTTAAAGGTCACAAAGTTGCCTTTCAGAAAGGTTCCAGTTCACACAACCTTTTACTGCGTGCACTGCGTCAGGCCGGACTTAAGTTTACCGATATCCAACCCACTTACCTGACGCCCGCTGATGCCCGCGCCGCGTTCCAGCAAGGTAACGTTGACGCCTGGGCTATCTGGGATCCCTACTACTCTGCTGCATTATTACAGGGCGGCGTGCGGGTGCTGAAAGACGGCACCGATCTCAATCAAACTGGATCGTTTTATCTGGCAGCTCGTCCCTATGCAGAAAAAAACGGCGCTTTTATTCAGGGCGTACTGGCAACCTTTAGTGAGGCCGATGCGTTAACCCGCAGCCAGCGCGAGCAAAGCATCGCTTTACTGGCAAAAACGATGGGCTTACCGGCACCGGTGATTGCCTCTTACTTAGATCATCGCCCTCCTACCACCATCAAACCGGTTAACGCCGAGGTTGCCGCCTTACAGCAGCAAACGGCAGATCTGTTTTATGAAAATCGTCTGGTGCCGAAAAAAGTCGATATTCGCCAGCGCATCTGGCAGCCCACTCAACTGGAAGGAAAACAATTATGA", + "dna_sequence_length": 960, + "functions": [ + "aliphatic sulfonate ABC transporter periplasmic binding protein" + ], + "id": "CDS_917", + "location": [ + [ + "NC_000913", + 996944, + "-", + 960 + ] + ], + "md5": "491fac9b3990f2c7b498699ba8c1b76a", + "parent_gene": "", + "protein_md5": "1bfb9032a7a4df03d61ec4efa5cb0546", + "protein_translation": "MRNIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003182" + ], + [ + "gene_synonym", + "ECK0928" + ], + [ + "gene_synonym", + "EcoGene:EG13708" + ], + [ + "gene_synonym", + "GI:16128904" + ], + [ + "gene_synonym", + "GeneID:945947" + ], + [ + "gene_synonym", + "JW0920" + ], + [ + "gene_synonym", + "NP_415457.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P80644" + ], + [ + "gene_synonym", + "b0937" + ], + [ + "gene_synonym", + "ssi4" + ], + [ + "gene_synonym", + "ssuE" + ], + [ + "gene_synonym", + "ycbP" + ] + ], + "dna_sequence": "ATGCGTGTCATCACCCTGGCGGGTAGTCCTCGCTTTCCTTCTCGCTCCAGCTCCTTGCTGGAATATGCGCGGGAAAAACTAAATGGCCTGGATGTAGAGGTTTATCACTGGAATCTGCAAAACTTCGCCCCGGAAGATCTACTTTATGCTCGTTTCGATAGTCCGGCACTCAAGACCTTCACCGAACAGCTGCAACAGGCCGATGGGCTGATTGTCGCCACGCCTGTGTATAAAGCCGCCTATTCCGGTGCGTTGAAAACCCTGCTCGACCTGCTGCCAGAACGCGCTTTGCAAGGCAAAGTGGTGCTACCGCTGGCGACGGGCGGTACCGTGGCCCATCTGCTGGCGGTCGATTATGCCCTTAAACCAGTTTTAAGCGCACTGAAAGCTCAGGAGATCCTGCACGGCGTGTTTGCCGATGACTCACAAGTAATTGATTACCATCACAGACCCCAGTTCACGCCAAATCTGCAAACCCGTCTTGATACCGCGCTAGAAACTTTCTGGCAGGCATTGCACCGCCGCGATGTTCAGGTTCCTGACCTTCTGTCTCTGCGAGGTAATGCCCATGCGTAA", + "dna_sequence_length": 576, + "functions": [ + "NAD(P)H-dependent FMN reductase" + ], + "id": "CDS_918", + "location": [ + [ + "NC_000913", + 997512, + "-", + 576 + ] + ], + "md5": "f75d3b5d679bd9b999a86d6ee19d3cf2", + "parent_gene": "", + "protein_md5": "6afd28a89336f8a5bdb073bf57c66710", + "protein_translation": "MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAPEDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVVLPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTRLDTALETFWQALHRRDVQVPDLLSLRGNAHA", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003185" + ], + [ + "gene_synonym", + "ECK0929" + ], + [ + "gene_synonym", + "EcoGene:EG13709" + ], + [ + "gene_synonym", + "GI:90111190" + ], + [ + "gene_synonym", + "GeneID:948306" + ], + [ + "gene_synonym", + "JW5122" + ], + [ + "gene_synonym", + "NP_415458.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75855" + ], + [ + "gene_synonym", + "b0938" + ], + [ + "gene_synonym", + "elfA" + ], + [ + "gene_synonym", + "ycbQ" + ] + ], + "dna_sequence": "ATGAAAAAAAGTGTATTGACGGCGTTTATAACTGTGGTATGTGCAACGTCCAGCGTTATGGCTGCTGATGATAATGCTATCACGGATGGCTCAGTAACATTTAATGGTAAAGTTATTGCTCCAGCTTGTACCCTGGTAGCTGCGACGAAAGATTCCGTGGTGACTTTGCCAGATGTTAGTGCCACGAAGTTGCAAACCAATGGTCAGGTTTCTGGCGTGCAAATTGATGTGCCAATTGAATTAAAAGATTGTGATACTACCGTAACAAAAAATGCAACGTTCACCTTTAATGGCACTGCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGGAAAGCGACTTCAGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAA", + "dna_sequence_length": 540, + "functions": [ + "laminin-binding fimbrin subunit" + ], + "id": "CDS_919", + "location": [ + [ + "NC_000913", + 997868, + "+", + 540 + ] + ], + "md5": "edd86e2d8ae07be65074e24a60d00eca", + "parent_gene": "", + "protein_md5": "21bd1ac51cf61c7416d9bff6ef4be505", + "protein_translation": "MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAITPDTETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINYY", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003187" + ], + [ + "gene_synonym", + "ECK0930" + ], + [ + "gene_synonym", + "EcoGene:EG13710" + ], + [ + "gene_synonym", + "GI:16128906" + ], + [ + "gene_synonym", + "GeneID:946773" + ], + [ + "gene_synonym", + "JW0922" + ], + [ + "gene_synonym", + "NP_415459.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75856" + ], + [ + "gene_synonym", + "b0939" + ], + [ + "gene_synonym", + "elfD" + ], + [ + "gene_synonym", + "ycbR" + ] + ], + "dna_sequence": "ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGCATGGGCGGCAGGTAAAGGCGGGATTGGACTTGCAGCAACACGTCTTGTTTATTCAGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTAACACCAGTCCGGATGTTCCTTATCTTATTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCAGACTTTATTATTACACCACCGCTATTTGTGCTGAATCCGGCAAATGAGAATCTGTTACGCATTATGTACATTGGAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGAAAGAGGGAAATACCCTGAAGATTGCCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGTTGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGGAAAAGTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTTTCTCTGCCAAAGGGGGCCAAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA", + "dna_sequence_length": 702, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_920", + "location": [ + [ + "NC_000913", + 998490, + "+", + 702 + ] + ], + "md5": "f34508a49ee5b676bfd287d2e4f88c99", + "parent_gene": "", + "protein_md5": "73ccc6a4209edad5a10c44b92e065f92", + "protein_translation": "MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKRKEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003189" + ], + [ + "gene_synonym", + "ECK0931" + ], + [ + "gene_synonym", + "EcoGene:EG13711" + ], + [ + "gene_synonym", + "GI:16128907" + ], + [ + "gene_synonym", + "GeneID:946934" + ], + [ + "gene_synonym", + "JW0923" + ], + [ + "gene_synonym", + "NP_415460.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75857" + ], + [ + "gene_synonym", + "b0940" + ], + [ + "gene_synonym", + "elfC" + ], + [ + "gene_synonym", + "ycbS" + ] + ], + "dna_sequence": "ATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGATCCCTCAATGGTGGCCGATTTGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATCGTGTCGATATTGTTCTGAATCAGACAATTGTAGATACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATTGCCGCCTGTTTGACGACTGAAAGCCTGGATGCAATGGGTGTTAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTTAATTTAGGCCCATGGAGATTGCGCAACAATTCAACATGGAGTCGTAGTAGTGGCCAAACCGCAGAATGGAAGAATCTCAGCAGCTATTTGCAACGGGCGGTTATTCCTCTGAAAGGCGAACTGACCGTAGGTGATGATTATACTGCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAAAGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAAGCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACCAAACTTATGTATCGCCTGGTGCTTTTGAAATTAGTGATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATCAAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGTACCGTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGATTTAACCTCGGCGATTTCGGAGCAATTTCGTTCGATGCGACCCAGGCGAAGAGTACGCTAGCAGATCAAAGCGAACATAAAGGTCAGTCATATCGTTTTCTGTATGCCAAAACGCTCAACCACTTGGGCACTAACTTTCAATTGATGGGCTATCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACCATGTATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCGATGTGGTCGCGTTATTACAATTTGTTTTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATTAGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCCAGCAAACTTACTGGCATACGGATCAACAGGATCGGCTATTACAGTTTGGCTACAACACGCAAATTAAAGATCTTTCGCTGGGGATTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCTGATCAGGTGTTTGCTCTAAATTTTTCCCTGCCGCTCAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAAAAATTACGCCTGGATGACCTCTAACACCAGTATCGATAACGAAGGGCACACTACACAAAACCTGGGTTTAACGGAGACATTACTCGATGACGGTAACCTGAGCTACAGCGTGCAACAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGCATGGATTACAAAGGGGCGTTTGCGGATGCCCGAGTGGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTACGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGGGCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTTCTGATTGCAGCACCAGGCGCAGAGAATACTCGTGTGGCGAACAGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTTCCTTATGCCACTTCTTATCGGGAAAATCGAATCGCACTTGATGCGGCGTCGTTAAAACGTAACGTGGATCTTGAAAATGCAGTAGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTCTGGCGGAGTTCAATGCCCATGCGGGTGCAAGGGTATTAATGAAAACATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCGATAGCGACGCTGGACGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA", + "dna_sequence_length": 2601, + "functions": [ + "putative outer membrane fimbrial subunit export usher protein" + ], + "id": "CDS_921", + "location": [ + [ + "NC_000913", + 999216, + "+", + 2601 + ] + ], + "md5": "dff34b1cbf2e492cf1f67949f2a2f4dc", + "parent_gene": "", + "protein_md5": "4e576e5dead09753b4c927bba256175c", + "protein_translation": "MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRFGAIATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINSAITRMDAICR", + "protein_translation_length": 866, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003191" + ], + [ + "gene_synonym", + "ECK0932" + ], + [ + "gene_synonym", + "EcoGene:EG13712" + ], + [ + "gene_synonym", + "GI:16128908" + ], + [ + "gene_synonym", + "GeneID:947185" + ], + [ + "gene_synonym", + "JW0924" + ], + [ + "gene_synonym", + "NP_415461.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75858" + ], + [ + "gene_synonym", + "b0941" + ], + [ + "gene_synonym", + "elfG" + ], + [ + "gene_synonym", + "ycbT" + ] + ], + "dna_sequence": "ATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCGATAAAGACAATGTCAGAAGTGGCCGATGGGCATTCGCCGCGGATTCACCGTTAGTCTATTTAGGCGACAACTGGTACAAAATTAATGACTATCTTGCCGCCAAAGTTTTATTGCAGGTTAAAGGCAGTTCTCCTACTGCGGTTCCTTTCGAAAACGTGGGCACAGGGGGGGATACCCGATGGCATATTTGCGACCCTGGCGGTCAACGTTTAGGTGGGCAGGGGGCAAGCGGTAATAGCGGTAGCTTTTCCCTGAAAATATTGCAGCCGTTCGTTGGCTCGGTCGTCATTCCTCCTATGGCGCTGGCGCGATTATATGAATGCTACAACATACCCGCAGGTGATTCCTGCACGACTACAGGTACACCGGTTTTAGTGTATTACCTGTCTGGTACGATCAATTCACTTGGCTCATGTTCCGTCAATGCCGGAGAGACAATTGAAGTTGATTTAGGTGATGTCTTCGCTGCCAATTTCCGTGTTGTAGGGCATAAACCTCTTGGGGCCAGAACGGCAGAACTTGCAATTCCAGTCAGGTGTAACACGGGAAACGCGGGATTAGTTAATGTCAACCTGAGTCTGACGGCAACCACAGACCCCAGCTATCCCCAGGCGATTAAGACGTCACGTCCTGGCGTGGGCGTGGTGGTGACCGATAGCCAGAACAACATTATTTCCCCTGCTGGTGGAACATTACCGCTCTCTATTCCTGATGATGCAGACAGTATCGCGCGAATGAATGTCTATCCAGTCAGCACGACAGGTGTACCACCAGAAACCGGGCGATTTGAAGCCACGGCAACGGTGAGAATAAATTTTGATTAA", + "dna_sequence_length": 1071, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_922", + "location": [ + [ + "NC_000913", + 1001807, + "+", + 1071 + ] + ], + "md5": "1f2033de8d462ee2ea0488bfa1388f68", + "parent_gene": "", + "protein_md5": "cf079588ac9e188e43b7c50a971b4474", + "protein_translation": "MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003193" + ], + [ + "gene_synonym", + "ECK0933" + ], + [ + "gene_synonym", + "EcoGene:EG13713" + ], + [ + "gene_synonym", + "GI:16128909" + ], + [ + "gene_synonym", + "GeneID:945561" + ], + [ + "gene_synonym", + "JW0925" + ], + [ + "gene_synonym", + "NP_415462.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75859" + ], + [ + "gene_synonym", + "b0942" + ], + [ + "gene_synonym", + "ycbU" + ] + ], + "dna_sequence": "ATGAAGAAAAAAACGATATTTCAGTGCGTTATCTTGTTCTTTAGCATTCTTAACATCCATGTCGGGATGGCTGGGCCTGAACAAGTTAGTATGCATATTTATGGGAATGTGGTCGATCAGGGCTGTGATGTCGCCACCAAAAGTGCATTACAAAATATTCATATTGGTGATTTTAATATCAGTGATTTTCAGGCCGCGAATACCGTAAGCACTGCTGCTGATTTGAATATCGATATCACCGGTTGTGCCGCTGGTATTACTGGCGCGGACGTCCTTTTTAGCGGCGAGGCTGACACCCTTGCGCCGACACTGCTCAAACTAACTGACACAGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGTTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGA", + "dna_sequence_length": 543, + "functions": [ + "putative fimbriae protein" + ], + "id": "CDS_923", + "location": [ + [ + "NC_000913", + 1002889, + "+", + 543 + ] + ], + "md5": "06985a1b327f3fbcdfc48c44d331a48d", + "parent_gene": "", + "protein_md5": "a4f4dea78477e0cad4ffd10432617020", + "protein_translation": "MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003195" + ], + [ + "gene_synonym", + "ECK0934" + ], + [ + "gene_synonym", + "EcoGene:EG13714" + ], + [ + "gene_synonym", + "GI:90111191" + ], + [ + "gene_synonym", + "GeneID:945562" + ], + [ + "gene_synonym", + "JW5123" + ], + [ + "gene_synonym", + "NP_415463.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75860" + ], + [ + "gene_synonym", + "b0943" + ], + [ + "gene_synonym", + "ycbV" + ] + ], + "dna_sequence": "ATGTTGAAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCTGTGAGCTATTTGCCCATGATGGCACGGTCAACATTAGCGGATCGTTTCGCCGTAATACATGCGTGCTGGCACAGGATAGCAAGCAAATCAATGTGCAGTTAGGCGATGTCTCGCTGACACGTTTTTCTCATGGGAATTATGGCCCGGAGAAATCTTTCATCATTAATTTGCAGGATTGCGGAACAGATGTCAGCACGGTTGACGTCACCTTTTCAGGAACCCCCGACGGAGTGCAGAGCGAAATGTTGTCCATTGAAAGTGGTACGGATGCAGCCAGCGGGCTGGCAATTGCGATTCTGGATGATGCGAAGATATTGATTCCGCTTAACCAGGCGAGTAAAGACTACAGCCTACATAGCGGTAAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAA", + "dna_sequence_length": 516, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_924", + "location": [ + [ + "NC_000913", + 1003439, + "+", + 516 + ] + ], + "md5": "2ecd1a689451dc52fd676bc0552c0a98", + "parent_gene": "", + "protein_md5": "15e74fc5841c10fbae4b43f485281b38", + "protein_translation": "MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003197" + ], + [ + "gene_synonym", + "ECK0935" + ], + [ + "gene_synonym", + "EcoGene:EG12397" + ], + [ + "gene_synonym", + "GI:90111192" + ], + [ + "gene_synonym", + "GeneID:945559" + ], + [ + "gene_synonym", + "JW5124" + ], + [ + "gene_synonym", + "NP_415464.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40876" + ], + [ + "gene_synonym", + "b0944" + ], + [ + "gene_synonym", + "ycbF" + ] + ], + "dna_sequence": "ATGACTAATACGTGGAACAGATTGGCGCTCTTGATTTTCGCCGTTTTATCGCTGCTGGTGGCGGGTGAATTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACGCTATTTGAGTTAAGCATTGCCAGCGTGCCATCCGGCAAAGTTGAAAATCAGAGCGTAAAAGTGGCGATGCGCTCGGTATTTAAACTGTTCTGGCGACCCGAAGGTTTGCCGGGCGACCCGCTGGAAGCTTATCAACAATTACGCTGGACACGGAATTCGCAGGGTGTACAACTCACTAACCCAACGCCTTATTACATTAACCTGATTCAGGTGAGTGTAAATGGTAAAGCGTTAAGTAATGTGGGAGTTGTGCCGCCTAAAAGCCAGCGTCAGACAAGCTGGTGTCAGGCAATCGCACCGTGTCATGTCGCCTGGCGGGCGATAAATGATTACGGCGGGTTGAGTGCAAAGAAGGAGCAAAATCTGCCCTGA", + "dna_sequence_length": 711, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_925", + "location": [ + [ + "NC_000913", + 1003947, + "+", + 711 + ] + ], + "md5": "cd25eb58b4383e4e9ee991f2ac84b87b", + "parent_gene": "", + "protein_md5": "03bbf7ed385172c5b08ce47bd248169b", + "protein_translation": "MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003201" + ], + [ + "gene_synonym", + "ECK0936" + ], + [ + "gene_synonym", + "EcoGene:EG10807" + ], + [ + "gene_synonym", + "GI:16128912" + ], + [ + "gene_synonym", + "GeneID:945556" + ], + [ + "gene_synonym", + "JW0928" + ], + [ + "gene_synonym", + "NP_415465.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E1" + ], + [ + "gene_synonym", + "b0945" + ], + [ + "gene_synonym", + "pyrD" + ] + ], + "dna_sequence": "ATGTACTACCCCTTCGTTCGTAAAGCCCTTTTCCAGCTCGATCCAGAGCGCGCTCATGAGTTTACTTTTCAGCAATTACGCCGTATTACAGGAACGCCGTTTGAAGCACTGGTGCGGCAGAAAGTGCCTGCGAAACCTGTTAACTGCATGGGCCTGACGTTTAAAAATCCGCTTGGTCTGGCAGCCGGTCTTGATAAAGACGGGGAGTGCATTGACGCGTTAGGCGCGATGGGATTTGGATCGATCGAGATCGGTACCGTCACGCCACGTCCACAGCCAGGTAATGACAAGCCGCGTCTCTTTCGTCTGGTAGATGCCGAAGGTTTGATCAACCGTATGGGCTTTAATAATCTTGGCGTTGATAACCTCGTAGAGAACGTAAAAAAGGCCCATTATGACGGCGTCCTGGGTATTAACATCGGCAAAAATAAAGATACGCCAGTGGAGCAGGGCAAAGATGACTATCTGATTTGTATGGAAAAAATCTATGCCTATGCGGGATATATCGCCATCAATATTTCATCGCCGAATACCCCAGGATTACGCACGCTGCAATATGGTGAAGCGCTGGATGATCTCTTAACCGCGATTAAAAATAAGCAAAATGATTTGCAAGCGATGCACCATAAATATGTGCCGATCGCAGTGAAGATCGCGCCGGATCTTTCTGAAGAAGAATTGATCCAGGTTGCCGATAGTTTAGTTCGCCATAATATTGATGGCGTTATTGCAACCAATACCACACTCGATCGTTCTCTTGTTCAGGGAATGAAAAATTGCGATCAAACCGGTGGCTTAAGTGGTCGTCCGCTTCAGTTAAAAAGCACCGAAATTATTCGCCGCTTGTCACTGGAATTAAACGGTCGCTTACCGATCATCGGTGTTGGCGGCATCGACTCGGTTATCGCTGCGCGTGAAAAGATTGCTGCGGGTGCCTCACTGGTGCAAATTTATTCTGGTTTTATTTTTAAAGGTCCGCCGCTGATTAAAGAAATCGTTACCCATATCTAA", + "dna_sequence_length": 1011, + "functions": [ + "dihydro-orotate oxidase, FMN-linked" + ], + "id": "CDS_926", + "location": [ + [ + "NC_000913", + 1004768, + "+", + 1011 + ] + ], + "md5": "4a16b5142fb0fbc970edf92694c790e4", + "parent_gene": "", + "protein_md5": "b67f2657a8e1d9fbf72ecf5cba7ecdd5", + "protein_translation": "MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003204" + ], + [ + "gene_synonym", + "ECK0937" + ], + [ + "gene_synonym", + "EcoGene:EG13715" + ], + [ + "gene_synonym", + "GI:90111193" + ], + [ + "gene_synonym", + "GeneID:945552" + ], + [ + "gene_synonym", + "JW5125" + ], + [ + "gene_synonym", + "NP_415466.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75862" + ], + [ + "gene_synonym", + "b0946" + ], + [ + "gene_synonym", + "ycbW" + ], + [ + "gene_synonym", + "zapC" + ] + ], + "dna_sequence": "ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGGTATGCTATTTCGCTCACGTTTTGCGCGCAAGATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACGCCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTGAATGCACTGGTAGCAATTCGCTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCCCATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGATACTCACGAGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAAATGCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAA", + "dna_sequence_length": 543, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_927", + "location": [ + [ + "NC_000913", + 1005952, + "+", + 543 + ] + ], + "md5": "d7a0da7dc052eee3f2e0b4697ea7c319", + "parent_gene": "", + "protein_md5": "46cd86b0ab1a1ff8395460bbf4878e7e", + "protein_translation": "MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003206" + ], + [ + "gene_synonym", + "ECK0938" + ], + [ + "gene_synonym", + "EcoGene:EG13716" + ], + [ + "gene_synonym", + "GI:16128914" + ], + [ + "gene_synonym", + "GeneID:945563" + ], + [ + "gene_synonym", + "JW5126" + ], + [ + "gene_synonym", + "NP_415467.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75863" + ], + [ + "gene_synonym", + "b0947" + ], + [ + "gene_synonym", + "ycbX" + ] + ], + "dna_sequence": "GTGGCGACATTAATCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATGCTCTGGCAGATGTCAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACGGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCCCAGATGGTACGGTTTACTCCTTCACCTGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGCGCATATGTTCGTTTTGCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAACAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCCACAACACTGTACCTCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAAGCCTCGTTACGTGATCTCCAACAACGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGCGCGTCAGCCTGGGAAGAAGATCGCTGGAAAGTGATTCGCATTGGTGATGTGGTGTTTGATGTGGTTAAACCTTGTAGCCGCTGTATTTTCACCACCGTCAGCCCAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACATTGCAATCTTTCCGCACTGCCCAGGATAACGGCGATGTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGCTCCGGCAAAAATTTACGGCGCAGCTGCCGCTGATGATACCGCCAACATCACGCAACAACCGGACGCAAATGTAGATATTGACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGTTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCTTATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTGAAAAAATCAGCAATGGGCGATGATGGCACCATTCTTTGCTGTAGCTGTGTACCGAAGACTGCACTTAAGTTGGCGCGTTAG", + "dna_sequence_length": 1110, + "functions": [ + "6-N-hydroxylaminopurine detoxification oxidoreductase" + ], + "id": "CDS_928", + "location": [ + [ + "NC_000913", + 1007600, + "-", + 1110 + ] + ], + "md5": "5ef20c8fef09880d715fe0d1d0b3388a", + "parent_gene": "", + "protein_md5": "5e795764819894ee45d68d26e4326c15", + "protein_translation": "MATLIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003211" + ], + [ + "gene_synonym", + "ECK0939" + ], + [ + "gene_synonym", + "EcoGene:EG13717" + ], + [ + "gene_synonym", + "GI:16128915" + ], + [ + "gene_synonym", + "GeneID:945564" + ], + [ + "gene_synonym", + "JW0931" + ], + [ + "gene_synonym", + "NP_415468.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75864" + ], + [ + "gene_synonym", + "b0948" + ], + [ + "gene_synonym", + "rlmK" + ], + [ + "gene_synonym", + "rlmKL" + ], + [ + "gene_synonym", + "rlmL" + ], + [ + "gene_synonym", + "ycbY" + ] + ], + "dna_sequence": "ATGAATTCTCTGTTTGCCAGTACGGCCCGTGGGCTGGAAGAGCTGTTAAAAACTGAACTGGAAAACCTGGGGGCCGTTGAATGCCAGGTGGTTCAGGGTGGGGTCCATTTCAAGGGCGACACACGGCTTGTTTACCAGAGCCTGATGTGGAGCCGCCTGGCCTCGCGTATTATGTTGCCGCTGGGCGAGTGTAAGGTTTACAGCGATTTAGACCTCTATCTCGGTGTTCAGGCGATCAACTGGACAGAGATGTTTAATCCTGGCGCGACCTTCGCTGTCCACTTCAGTGGTTTGAATGACACCATCCGCAACAGTCAGTACGGCGCGATGAAAGTGAAAGACGCGATCGTCGATGCTTTCACGCGGAAAAATCTGCCGCGTCCAAATGTTGATCGCGATGCGCCGGATATCCGCGTTAACGTCTGGCTGCATAAAGAAACCGCCAGTATCGCTCTTGATCTGAGTGGTGATGGTTTACATCTGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGTCGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCTCGCCGGATCTGCTAAGCTGCTTGCAGCTGCGTGCAGACAAACAGTACAAGGCGAAAAACGGCCCGCTGGACTGCGTACAGAAAAATTACCACGTTGCCGAAAGCACTCCAGACAGCAAACCGGCGATGGTAGCGGAAGACTACACCAACCGCCTGCGTAAGAACCTCAAAAAATTCGAGAAGTGGGCTCGCCAGGAAGGGATTGAATGTTACCGCCTGTATGACGCCGATCTGCCAGAATATAACGTTGCCGTTGACCGTTATGCCGACTGGGTGGTGGTGCAGGAGTATGCGCCGCCAAAAACTATTGATGCTCACAAAGCGCGTCAGCGTCTGTTCGATATTATCGCTGCAACCATTTCGGTACTGGGGATTGCGCCAAACAAACTGGTGCTGAAAACCCGTGAACGCCAGAAGGGCAAAAACCAATACCAGAAACTGGGCGAGAAGGGCGAGTTTCTTGAAGTTACCGAATATAACGCTCACTTGTGGGTGAACCTGACGGATTATCTCGATACTGGTCTGTTCCTCGATCACCGCATCGCCCGTCGTATGCTCGGTCAGATGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCGTATGGATCTCGACGGCCTGGCAAAACTGGGACTGAAAGCACAAGAAATTACGCAAAAAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGA", + "dna_sequence_length": 2109, + "functions": [ + "23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent" + ], + "id": "CDS_929", + "location": [ + [ + "NC_000913", + 1007844, + "+", + 2109 + ] + ], + "md5": "be046447b886a7098d4c0eb22733c9ba", + "parent_gene": "", + "protein_md5": "7e23c1fcf603a5f63994d59b1ad64ad1", + "protein_translation": "MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA", + "protein_translation_length": 702, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003213" + ], + [ + "gene_synonym", + "ECK0940" + ], + [ + "gene_synonym", + "EcoGene:EG13134" + ], + [ + "gene_synonym", + "GI:16128916" + ], + [ + "gene_synonym", + "GeneID:945566" + ], + [ + "gene_synonym", + "JW0932" + ], + [ + "gene_synonym", + "NP_415469.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43672" + ], + [ + "gene_synonym", + "b0949" + ], + [ + "gene_synonym", + "uup" + ], + [ + "gene_synonym", + "ycbH" + ], + [ + "gene_synonym", + "ycbI" + ] + ], + "dna_sequence": "ATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGCCGCAACGGCGCAGGCAAATCGACGTTAATGAAAATCCTCAACCGTGAACAAGGGCTGGATGACGGTCGCATTATTTACGAGCAAGATTTGATTGTAGCGCGTCTGCAACAGGATCCGCCGCGTAACGTTGAGGGTAGCGTTTATGATTTCGTTGCCGAAGGCATTGAAGAACAAGCGGAATATCTGAAACGCTATCACGATATTTCGCGCCTGGTGATGAACGACCCGAGCGAGAAAAATCTCAACGAACTGGCGAAGGTTCAGGAACAGCTGGATCACCACAACCTGTGGCAGCTGGAAAACCGCATCAACGAAGTGCTGGCGCAACTGGGGTTAGATCCTAACGTTGCGCTGTCGTCGCTTTCCGGCGGCTGGTTGCGTAAAGCGGCATTAGGACGCGCGCTGGTGAGTAATCCGCGCGTGCTGTTGCTTGATGAACCGACAAACCACCTGGATATTGAAACCATCGACTGGCTGGAAGGGTTTTTGAAAACTTTCAACGGGACGATTATTTTCATCTCCCACGACCGTTCGTTTATCCGCAATATGGCGACGCGCATTGTTGATCTCGATCGCGGCAAGCTGGTGACCTATCCAGGGAATTACGACCAGTACCTGCTGGAAAAAGAAGAAGCCCTGCGCGTGGAAGAATTACAAAATGCCGAGTTCGATCGCAAACTGGCGCAGGAAGAGGTGTGGATCCGCCAGGGGATCAAAGCACGCCGTACCCGTAATGAAGGCCGCGTACGCGCCCTGAAAGCGATGCGTCGCGAACGTGGTGAACGTCGCGAAGTGATGGGTACCGCAAAGATGCAGGTGGAAGAGGCCAGCCGCTCCGGTAAAATCGTTTTCGAAATGGAAGACGTTTGCTACCAGGTTAACGGTAAGCAACTGGTGAAAGATTTTTCTGCCCAGGTTCTACGTGGCGACAAAATTGCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGGTGATGGTTAACGGCAAGCCACGCCACGTATTGGGCTATTTGCAGGACTTTCTGTTCCATCCGAAACGGGCGATGACGCCGGTACGTGCGCTTTCTGGCGGTGAGCGGAACCGCTTGCTGCTGGCGCGTTTGTTCCTCAAACCAAGCAACTTATTGATTCTTGACGAACCGACCAACGATCTTGATGTCGAAACGCTGGAACTGCTGGAAGAACTGATCGACAGCTATCAGGGCACGGTATTGCTGGTTAGCCACGATCGTCAGTTTGTCGATAACACCGTTACAGAATGTTGGATCTTCGAAGGCGGCGGTAAAATTGGTCGTTATGTCGGCGGTTATCATGATGCCCGTGGTCAGCAAGAGCAGTATGTGGCGCTCAAACAGCCTGCGGTGAAAAAAACCGAAGAAGCCGCCGCGGCAAAAGCAGAAACTGTAAAACGCAGCAGTAGCAAACTAAGCTATAAATTGCAGCGCGAACTGGAGCAGCTACCGCAATTGCTCGAAGATCTGGAGGCGAAGCTGGAAGCCCTACAGACGCAAGTGGCGGATGCTTCCTTCTTCAGTCAGCCGCATGAGCAGACGCAAAAAGTGCTTGCTGATATGGCTGCTGCAGAGCAGGAGCTGGAGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGA", + "dna_sequence_length": 1908, + "functions": [ + "replication regulatory ABC-F family DNA-binding ATPase" + ], + "id": "CDS_930", + "location": [ + [ + "NC_000913", + 1009964, + "+", + 1908 + ] + ], + "md5": "4b9ca3493e271f33e73b845322c8e94f", + "parent_gene": "", + "protein_md5": "742d2f6c2765fa66d4f2849938438877", + "protein_translation": "MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEALKNGG", + "protein_translation_length": 635, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003219" + ], + [ + "gene_synonym", + "ECK0941" + ], + [ + "gene_synonym", + "EcoGene:EG12965" + ], + [ + "gene_synonym", + "GI:16128917" + ], + [ + "gene_synonym", + "GeneID:944999" + ], + [ + "gene_synonym", + "JW0933" + ], + [ + "gene_synonym", + "NP_415470.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL9" + ], + [ + "gene_synonym", + "b0950" + ], + [ + "gene_synonym", + "pqi5" + ], + [ + "gene_synonym", + "pqiA" + ] + ], + "dna_sequence": "ATGTGCGAACATCATCATGCCGCGAAGCACATCCTGTGCTCGCAGTGTGACATGCTGGTGGCGTTACCGCGCCTTGAGCATGGTCAGAAAGCGGCATGTCCCCGGTGTGGCACAACGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCATGCTGTTGCTGTCCAACTTGTTTCCTTTTGTGAATATGAACGTTGCAGGAGTTACCAGTGAAATTACATTACTGGAAATTCCCGGCGTGCTTTTTTCTGAGGACTACGCCAGCCTCGGCACCTTTTTCCTGTTGTTTGTGCAACTGGTTCCCGCGTTTTGTCTGATAACCATTCTGTTACTGGTGAATCGCGCGGAATTACCGGTCCGTTTAAAAGAGCAACTGGCACGGGTGCTTTTTCAACTCAAAACCTGGGGAATGGCGGAGATTTTCCTCGCGGGTGTGCTGGTCAGTTTCGTTAAACTGATGGCTTACGGCAGCATTGGGGTAGGCAGCAGCTTTCTCCCCTGGTGTTTATTTTGTGTCCTGCAACTGCGCGCTTTTCAGTGCGTTGATCGTCGCTGGTTATGGGACGACATCGCCCCGATGCCAGAACTGCGCCAGCCGCTAAAACCAGGCGTCACGGGGATACGTCAGGGGCTGCGTTCGTGCTCCTGTTGTACGGCAATCCTTCCTGCTGATGAACCCGTGTGCCCGCGTTGTAGTACCAAAGGGTACGTTCGGCGTAGAAACAGCCTGCAGTGGACACTCGCGCTGCTTGTAACGTCCATCATGCTGTATCTTCCGGCTAATATTTTGCCCATCATGGTGACGGATTTATTAGGCTCGAAGATGCCGTCGACGATTCTCGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAGTATTATGGTGCCAACGTTAAAGATGATCGCCATCGCGTGGCTGTGTTGGGATGCCAAAGGGCATGGCAAGCGCGACAGTGAAAGAATGCATTTGATTTATGAAGTTGTTGAGTTTGTAGGCCGCTGGTCGATGATTGACGTTTTCGTTATCGCGGTGCTCTCGGCGCTGGTGCGTATGGGAGGTTTAATGAGTATTTATCCGGCAATGGGTGCATTAATGTTTGCTTTAGTCGTCATAATGACAATGTTTTCTGCTATGACGTTTGACCCGCGTTTGTCGTGGGATCGTCAACCTGAATCAGAGCATGAGGAGTCCTGA", + "dna_sequence_length": 1254, + "functions": [ + "paraquat-inducible, SoxRS-regulated inner membrane protein" + ], + "id": "CDS_931", + "location": [ + [ + "NC_000913", + 1012001, + "+", + 1254 + ] + ], + "md5": "d5716c43cee9a1cfd39b46bbadf1f0bf", + "parent_gene": "", + "protein_md5": "f939cdca0fd1d1ed4d214683c9e9a204", + "protein_translation": "MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003221" + ], + [ + "gene_synonym", + "ECK0942" + ], + [ + "gene_synonym", + "EcoGene:EG12966" + ], + [ + "gene_synonym", + "GI:16128918" + ], + [ + "gene_synonym", + "GeneID:945653" + ], + [ + "gene_synonym", + "JW0934" + ], + [ + "gene_synonym", + "NP_415471.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43671" + ], + [ + "gene_synonym", + "b0951" + ], + [ + "gene_synonym", + "pqi5" + ], + [ + "gene_synonym", + "pqiB" + ] + ], + "dna_sequence": "ATGGAATCTAATAATGGGGAAGCCAAAATCCAGAAAGTGAAGAACTGGTCTCCCGTGTGGATATTTCCTATCGTCACGGCGCTCATTGGGGCCTGGGTTCTTTTTTATCATTACAGCCATCAGGGACCGGAAGTGACCCTGATCACCGCGAATGCGGAAGGAATTGAAGGTGGCAAAACCACCATTAAAAGCCGTAGCGTTGACGTCGGCGTGGTTGAAAGCGCCACACTGGCTGATGATTTGACGCACGTTGAAATCAAAGCGCGGCTGAATTCCGGTATGGAAAAATTGCTGCATAAAGACACCGTCTTTTGGGTGGTGAAACCGCAGATTGGTCGCGAAGGGATTAGCGGCCTGGGAACGCTGCTGTCTGGAGTTTATATCGAACTGCAGCCAGGCGCGAAAGGCAGCAAAATGGATAAATACGATTTGCTGGACTCGCCACCGTTGGCCCCGCCTGATGCGAAAGGTATCCGTGTGATTCTCGATAGCAAAAAAGCCGGGCAGCTCTCGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCCAGTGGCACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGATTCGTATCGAGCCAGAGCGGCTGAAAATGCAGCTTGGCGAAAATGCGGATGTTGTTGAGCACCTTGGCGAATTGTTGAAACGTGGTTTACGCGGATCGCTGAAAACCGGAAACCTGGTCACTGGTGCACTGTATGTTGATCTCGATTTCTATCCAAATACGCCTGCAATAACCGGTATTCGTGAATTTAATGGTTATCAGATTATCCCGACCGTTAGCGGCGGCCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTCGCTAGCCAGTCGATGCAGCAGTTGCCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGCTCCGCAGCCTACAACAAGATGGTGGCGGATATGCAGCGCCTTGATCAGGTGTTGCGAGAACTGCAACCGGTGCTGAAAACGCTCAATGAGAAGAGTAACGCGCTGGTATTTGAAGCGAAGGACAAAAAAGATCCAGAGCCGAAGAGGGCGAAACAATGA", + "dna_sequence_length": 1641, + "functions": [ + "paraquat-inducible, SoxRS-regulated MCE domain protein" + ], + "id": "CDS_932", + "location": [ + [ + "NC_000913", + 1013259, + "+", + 1641 + ] + ], + "md5": "a7ed64f957c1a82b60ef49fdf6a9c118", + "parent_gene": "", + "protein_md5": "61acd3582d9c4b965d1feae2c5e4a5ff", + "protein_translation": "MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ", + "protein_translation_length": 546, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003223" + ], + [ + "gene_synonym", + "ECK0943" + ], + [ + "gene_synonym", + "EcoGene:EG13719" + ], + [ + "gene_synonym", + "GI:145698237" + ], + [ + "gene_synonym", + "GeneID:946972" + ], + [ + "gene_synonym", + "JW5127" + ], + [ + "gene_synonym", + "NP_415472.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB10" + ], + [ + "gene_synonym", + "b0952" + ], + [ + "gene_synonym", + "pqiC" + ], + [ + "gene_synonym", + "ymbA" + ] + ], + "dna_sequence": "ATGAAAAAGTGGCTAGTGACGATTGCAGCACTGTGGCTGGCCGGATGCAGCTCCGGCGAAATTAATAAAAACTATTACCAGTTACCTGTGGTGCAGAGCGGTACACAAAGTACCGCCAGCCAGGGCAATCGTCTGTTATGGGTAGAGCAGGTCACTGTTCCTGACTATCTGGCGGGGAATGGTGTGGTTTATCAAACCAGTGATGTGAAGTATGTGATTGCCAACAACAACTTGTGGGCCAGCCCGTTGGATCAACAGTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCTATGATGGCAAGGTCATTGTCAGTGGTGAGTGGCTGTTGAACCACCAGGGACAACTGATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAA", + "dna_sequence_length": 564, + "functions": [ + "DUF330 family putative lipoprotein" + ], + "id": "CDS_933", + "location": [ + [ + "NC_000913", + 1014896, + "+", + 564 + ] + ], + "md5": "a601a9475bc52a21a0b53292761452c1", + "parent_gene": "", + "protein_md5": "bd691998ea3f9cfa35179f4cc74664a0", + "protein_translation": "MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLAGVWSQEAASIAQEIKRLP", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003227" + ], + [ + "gene_synonym", + "ECK0944" + ], + [ + "gene_synonym", + "EcoGene:EG50004" + ], + [ + "gene_synonym", + "GI:16128920" + ], + [ + "gene_synonym", + "GeneID:945567" + ], + [ + "gene_synonym", + "JW0936" + ], + [ + "gene_synonym", + "NP_415473.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFW2" + ], + [ + "gene_synonym", + "b0953" + ], + [ + "gene_synonym", + "rmf" + ] + ], + "dna_sequence": "ATGAAGAGACAAAAACGAGATCGCCTGGAACGGGCACATCAACGTGGTTATCAGGCCGGCATCGCCGGACGCTCAAAAGAAATGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGA", + "dna_sequence_length": 168, + "functions": [ + "ribosome modulation factor" + ], + "id": "CDS_934", + "location": [ + [ + "NC_000913", + 1015715, + "+", + 168 + ] + ], + "md5": "3f27c26a89f395d18db2854cf89589f5", + "parent_gene": "", + "protein_md5": "d4cde8ccefd4aac4b796529242bb3092", + "protein_translation": "MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003229" + ], + [ + "gene_synonym", + "ECK0945" + ], + [ + "gene_synonym", + "EcoGene:EG10273" + ], + [ + "gene_synonym", + "GI:16128921" + ], + [ + "gene_synonym", + "GeneID:945568" + ], + [ + "gene_synonym", + "JW0937" + ], + [ + "gene_synonym", + "NP_415474.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Q3" + ], + [ + "gene_synonym", + "b0954" + ], + [ + "gene_synonym", + "fabA" + ] + ], + "dna_sequence": "ATGGTAGATAAACGCGAATCCTATACAAAAGAAGACCTTCTTGCCTCTGGTCGCGGTGAACTGTTTGGCGCTAAAGGCCCGCAATTGCCAGCACCGAACATGCTGATGATGGACCGTGTGGTCAAAATGACCGAAACGGGTGGTAACTTCGACAAAGGGTATGTTGAAGCAGAACTGGATATCAATCCGGATCTGTGGTTCTTCGGATGCCACTTTATTGGCGATCCGGTTATGCCGGGATGCCTGGGCCTGGACGCAATGTGGCAGCTGGTAGGGTTCTACCTCGGCTGGCTGGGCGGCGAAGGTAAAGGCCGCGCGCTGGGCGTTGGCGAAGTGAAATTCACTGGTCAGGTACTGCCGACAGCGAAAAAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCTGGTTGATGGTCGTCTGATCTATACCGCCAGCGACCTGAAAGTCGGTCTGTTCCAGGATACGTCTGCCTTCTGA", + "dna_sequence_length": 519, + "functions": [ + "beta-hydroxydecanoyl thioester dehydrase" + ], + "id": "CDS_935", + "location": [ + [ + "NC_000913", + 1016470, + "-", + 519 + ] + ], + "md5": "6f94f974ef0e6d50216e03c334812a56", + "parent_gene": "", + "protein_md5": "f02c85ffe7784203e2291bb5cd740ffe", + "protein_translation": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003233" + ], + [ + "gene_synonym", + "ECK0946" + ], + [ + "gene_synonym", + "EcoGene:EG13718" + ], + [ + "gene_synonym", + "GI:16128922" + ], + [ + "gene_synonym", + "GeneID:945569" + ], + [ + "gene_synonym", + "JW0938" + ], + [ + "gene_synonym", + "NP_415475.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75867" + ], + [ + "gene_synonym", + "b0955" + ], + [ + "gene_synonym", + "ycbZ" + ] + ], + "dna_sequence": "TTGACCATTACGAAACTTGCATGGCGTGACCTGGTTCCTGATACCGATAGCTATCAGGAAATATTTGCTCAGCCACATTTGATTGACGAAAACGATCCTTTATTCAGTGATACTCAACCGCGGCTGCAATTTGCGCTGGAGCAGTTGCTGCATACGCGAGCATCCTCCTCTTTTATGCTGGCGAAGGCCCCGGAAGAGTCTGAGTATCTGAATCTTATTGCCAATGCCGCGCGTACGCTACAAAGCGATGCAGGCCAACTGGTGGGCGGTCACTATGAGGTTTCCGGCCACTCCATCCGCTTACGTCACGCAGTGAGTGCAGATGATAATTTTGCGACTTTAACGCAAGTTGTCGCTGCCGACTGGGTAGAAGCGGAGCAACTCTTTGGCTGCCTGCGCCAGTTTAATGGCGACATTACCCTGCAGCCTGGTCTGGTGCATCAGGCAAATGGCGGTATTCTCATTATCTCTTTGCGTACACTGCTGGCGCAACCTCTGCTGTGGATGCGGCTGAAAAATATCGTTAACCGCGAGCGTTTTGACTGGGTTGCGTTTGATGAGTCGCGCCCTCTCCCCGTCTCTGTGCCTTCGATGCCATTGAAGCTGAAAGTCATTCTGGTAGGCGAACGCGAATCATTGGCTGATTTCCAGGAGATGGAGCCAGAGCTTTCAGAGCAGGCTATTTATAGCGAATTTGAAGATACTCTGCAGATTGTCGATGCGGAGTCAGTAACCCAGTGGTGTCGCTGGGTGACATTTACCGCCAGACATAATCACTTACCTGCACCGGGAGCGGATGCCTGGCCGATACTTATCCGCGAAGCAGCACGCTACACCGGTGAACAAGAAACACTTCCGCTTAGCCCGCAGTGGATCCTCCGCCAGTGTAAAGAGGTCGCCTCCCTGTGTGATGGCGACACCTTCTCCGGCGAGCAGCTAAACTTAATGCTGCAGCAGCGTGAATGGCGCGAAGGTTTCCTCGCTGAACGTATGCAGGATGAGATCCTTCAGGAGCAAATCCTGATTGAAACCGAAGGCGAACGCATCGGGCAAATTAACGCCCTTTCGGTCATTGAATTTCCGGGTCATCCACGCGCTTTTGGCGAACCTTCTCGCATTAGCTGCGTTGTGCATATTGGCGATGGTGAATTCACCGACATCGAACGCAAAGCGGAGCTTGGCGGCAATATCCATGCGAAAGGGATGATGATCATGCAAGCGTTCCTGATGTCGGAACTACAGCTTGAGCAACAGATCCCCTTCTCAGCATCGCTGACATTTGAGCAGTCATACAGTGAAGTTGATGGAGATAGTGCCTCGATGGCTGAACTCTGCGCCCTGATAAGCGCCCTCGCCGATGTGCCGGTGAATCAGAGTATCGCTATCACAGGTTCAGTCGATCAGTTCGGTCGCGCCCAGCCGGTCGGTGGTTTAAATGAGAAAATCGAAGGCTTCTTTGCTATTTGCCAGCAACGTGAGTTAACCGGGAAACAAGGTGTCATTATCCCCACAGCTAACGTTCGCCATTTAAGTCTTCACAGTGAACTGGTGAAAGCGGTAGAAGAAGGCAAATTCACCATCTGGGCAGTAGACGATGTGACTGACGCACTGCCGTTATTATTAAATCTGGTGTGGGATGGCGAAGGCCAAACGACGCTGATGCAAACCATCCAGGAACGTATCGCGCAAGCATCGCAACAGGAAGGACGTCACCGTTTTCCATGGCCATTACGTTGGCTGAACTGGTTTATTCCGAACTGA", + "dna_sequence_length": 1761, + "functions": [ + "putative peptidase" + ], + "id": "CDS_936", + "location": [ + [ + "NC_000913", + 1018299, + "-", + 1761 + ] + ], + "md5": "7cb74ff4b8ed360ccbe4d32cdbba703f", + "parent_gene": "", + "protein_md5": "6b9e639c27a78addb49b2859f04572fe", + "protein_translation": "MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFMLAKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLRHAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPILIREAARYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN", + "protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003238" + ], + [ + "gene_synonym", + "ECK0947" + ], + [ + "gene_synonym", + "EcoGene:EG12855" + ], + [ + "gene_synonym", + "GI:16128923" + ], + [ + "gene_synonym", + "GeneID:945570" + ], + [ + "gene_synonym", + "JW0939" + ], + [ + "gene_synonym", + "NP_415476.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8N0" + ], + [ + "gene_synonym", + "b0956" + ], + [ + "gene_synonym", + "matP" + ], + [ + "gene_synonym", + "ycbG" + ] + ], + "dna_sequence": "ATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGCCAGTGCCGCCCAGGAAGCCGTCGATGTGTTGCTCTCGCTGGAAAATGAACCCGTGCTGGTAAATGGCTGGATTGACAAGCATATGAATCCGGAACTGGTCAATCGCATGAAGCAAACCATTCGGGCAAGACGAAAGCGCCATTTTAATGCGGAACACCAGCATACGCGCAAAAAATCGATCGATCTGGAATTTATTGTCTGGCAACGTCTGGCTGGTCTTGCGCAGCGTCGCGGTAAAACGCTTTCTGAAACGATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAA", + "dna_sequence_length": 453, + "functions": [ + "Ter macrodomain organizer matS-binding protein" + ], + "id": "CDS_937", + "location": [ + [ + "NC_000913", + 1018485, + "+", + 453 + ] + ], + "md5": "d82b912a202dc8146609ed475a7b5fa8", + "parent_gene": "", + "protein_md5": "5e6a0c788d0c833da07e1ed249e16d3e", + "protein_translation": "MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003240" + ], + [ + "gene_synonym", + "ECK0948" + ], + [ + "gene_synonym", + "EcoGene:EG10669" + ], + [ + "gene_synonym", + "GI:16128924" + ], + [ + "gene_synonym", + "GeneID:945571" + ], + [ + "gene_synonym", + "JW0940" + ], + [ + "gene_synonym", + "NP_415477.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A910" + ], + [ + "gene_synonym", + "b0957" + ], + [ + "gene_synonym", + "con" + ], + [ + "gene_synonym", + "ompA" + ], + [ + "gene_synonym", + "tolG" + ], + [ + "gene_synonym", + "tut" + ] + ], + "dna_sequence": "ATGAAAAAGACAGCTATCGCGATTGCAGTGGCACTGGCTGGTTTCGCTACCGTAGCGCAGGCCGCTCCGAAAGATAACACCTGGTACACTGGTGCTAAACTGGGCTGGTCCCAGTACCATGACACTGGTTTCATCAACAACAATGGCCCGACCCATGAAAACCAACTGGGCGCTGGTGCTTTTGGTGGTTACCAGGTTAACCCGTATGTTGGCTTTGAAATGGGTTACGACTGGTTAGGTCGTATGCCGTACAAAGGCAGCGTTGAAAACGGTGCATACAAAGCTCAGGGCGTTCAACTGACCGCTAAACTGGGTTACCCAATCACTGACGACCTGGACATCTACACTCGTCTGGGTGGCATGGTATGGCGTGCAGACACTAAATCCAACGTTTATGGTAAAAACCACGACACCGGCGTTTCTCCGGTCTTCGCTGGCGGTGTTGAGTACGCGATCACTCCTGAAATCGCTACCCGTCTGGAATACCAGTGGACCAACAACATCGGTGACGCACACACCATCGGCACTCGTCCGGACAACGGCATGCTGAGCCTGGGTGTTTCCTACCGTTTCGGTCAGGGCGAAGCAGCTCCAGTAGTTGCTCCGGCTCCAGCTCCGGCACCGGAAGTACAGACCAAGCACTTCACTCTGAAGTCTGACGTTCTGTTCAACTTCAACAAAGCAACCCTGAAACCGGAAGGTCAGGCTGCTCTGGATCAGCTGTACAGCCAGCTGAGCAACCTGGATCCGAAAGACGGTTCCGTAGTTGTTCTGGGTTACACCGACCGCATCGGTTCTGACGCTTACAACCAGGGTCTGTCCGAGCGCCGTGCTCAGTCTGTTGTTGATTACCTGATCTCCAAAGGTATCCCGGCAGACAAGATCTCCGCACGTGGTATGGGCGAATCCAACCCGGTTACTGGCAACACCTGTGACAACGTGAAACAGCGTGCTGCACTGATCGACTGCCTGGCTCCGGATCGTCGCGTAGAGATCGAAGTTAAAGGTATCAAAGACGTTGTAACTCAGCCGCAGGCTTAA", + "dna_sequence_length": 1041, + "functions": [ + "outer membrane protein A (3a;II*;G;d)" + ], + "id": "CDS_938", + "location": [ + [ + "NC_000913", + 1020053, + "-", + 1041 + ] + ], + "md5": "834183d5a9046c02c89ca472aaba3d83", + "parent_gene": "", + "protein_md5": "19ba0f718f9b01d9d0d873666790014f", + "protein_translation": "MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003244" + ], + [ + "gene_synonym", + "ECK0949" + ], + [ + "gene_synonym", + "EcoGene:EG10984" + ], + [ + "gene_synonym", + "GI:16128925" + ], + [ + "gene_synonym", + "GeneID:947335" + ], + [ + "gene_synonym", + "JW0941" + ], + [ + "gene_synonym", + "NP_415478.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFZ5" + ], + [ + "gene_synonym", + "b0958" + ], + [ + "gene_synonym", + "sfiA" + ], + [ + "gene_synonym", + "sulA" + ] + ], + "dna_sequence": "ATGTACACTTCAGGCTATGCACATCGTTCTTCGTCGTTCTCATCCGCAGCAAGTAAAATTGCGCGTGTCTCTACGGAAAACACTACAGCCGGGCTTATCAGTGAAGTTGTCTATCGCGAAGATCAGCCCATGATGACGCAACTTCTACTGTTGCCATTGTTACAGCAACTCGGTCAGCAATCGCGCTGGCAACTCTGGTTAACACCGCAACAAAAACTGAGTCGGGAATGGGTTCAGGCATCTGGGCTACCCTTAACGAAAGTAATGCAGATTAGCCAGCTCTCCCCTTGCCACACTGTGGAGTCAATGGTTCGCGCTTTACGCACGGGCAATTACAGTGTGGTGATCGGTTGGTTGGCAGATGATTTGACTGAAGAAGAGCATGCTGAACTTGTTGATGCGGCAAATGAAGGTAACGCTATGGGGTTTATTATGCGTCCGGTAAGCGCATCCTCTCACGCCACGAGACAACTTTCCGGGCTAAAAATTCACTCTAATTTGTATCATTAA", + "dna_sequence_length": 510, + "functions": [ + "SOS cell division inhibitor" + ], + "id": "CDS_939", + "location": [ + [ + "NC_000913", + 1020919, + "-", + 510 + ] + ], + "md5": "26a0217665db4ab2b47545d2feeaab79", + "parent_gene": "", + "protein_md5": "66e7df825c29df2dd996d2dd7ae4d09a", + "protein_translation": "MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVESMVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSGLKIHSNLYH", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003249" + ], + [ + "gene_synonym", + "ECK0950" + ], + [ + "gene_synonym", + "EcoGene:EG13720" + ], + [ + "gene_synonym", + "GI:16128926" + ], + [ + "gene_synonym", + "GeneID:946504" + ], + [ + "gene_synonym", + "JW0942" + ], + [ + "gene_synonym", + "NP_415479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75869" + ], + [ + "gene_synonym", + "b0959" + ], + [ + "gene_synonym", + "sxy" + ], + [ + "gene_synonym", + "tfoX" + ], + [ + "gene_synonym", + "yccR" + ] + ], + "dna_sequence": "ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATTGTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTGAGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAATTACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCTGAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCGGGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA", + "dna_sequence_length": 630, + "functions": [ + "CRP-S-dependent promoter expression factor" + ], + "id": "CDS_940", + "location": [ + [ + "NC_000913", + 1021138, + "+", + 630 + ] + ], + "md5": "3f060c27f40408af896459d30379831c", + "parent_gene": "", + "protein_md5": "6361f275c91f2feefb9053d6ca87cca6", + "protein_translation": "MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003251" + ], + [ + "gene_synonym", + "ECK0951" + ], + [ + "gene_synonym", + "EcoGene:EG13721" + ], + [ + "gene_synonym", + "GI:90111194" + ], + [ + "gene_synonym", + "GeneID:947001" + ], + [ + "gene_synonym", + "JW5128" + ], + [ + "gene_synonym", + "NP_415480.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75870" + ], + [ + "gene_synonym", + "b0960" + ], + [ + "gene_synonym", + "yccS" + ] + ], + "dna_sequence": "ATGCTAAGTCCTTTGCTCAAACGCTATACCTGGAACAGCGCCTGGCTGTATTACGCGCGTATTTTTATTGCGCTTTGTGGAACCACAGCGTTTCCGTGGTGGCTGGGTGATGTAAAACTGACGATTCCGCTAACGCTGGGGATGGTGGCAGCGGCGCTGACCGATCTCGATGACCGACTGGCGGGACGTTTGCGTAACCTCATCATTACGCTGTTCTGCTTTTTTATCGCCTCGGCCTCAGTAGAATTGCTGTTTCCCTGGCCCTGGCTATTTGCGATTGGCTTAACGCTCTCTACCAGCGGCTTCATTTTGCTCGGCGGTCTGGGTCAACGCTATGCAACAATTGCCTTCGGTGCATTGCTGATCGCCATTTACACTATGTTGGGAACATCACTGTATGAGCACTGGTATCAGCAGCCGATGTATCTGCTGGCCGGTGCCGTCTGGTACAACGTCCTGACACTTATTGGTCATCTGCTGTTCCCGGTCCGCCCGCTGCAGGACAACCTGGCGCGTTGCTATGAACAACTGGCGCGTTATCTTGAGCTCAAGTCGCGCATGTTTGATCCTGATATTGAAGATCAAAGCCAGGCACCGCTGTACGATTTGGCTCTCGCCAACGGTCTGCTGATGGCGACATTGAATCAGACGAAACTCTCGCTGCTGACCCGCTTACGTGGCGATCGTGGTCAACGGGGAACGCGTCGCACGCTGCATTATTACTTTGTCGCACAGGATATTCACGAGCGTGCCAGCTCTTCTCATATTCAGTATCAAACATTGCGTGAACATTTTCGCCACAGCGACGTGCTGTTCCGTTTTCAGCGGCTGATGTCGATGCAGGGCCAGGCGTGCCAGCAACTGTCACGCTGTATTTTGTTGCGTCAGCCTTATCAACATGATCCGCATTTTGAGCGCGCTTTTACGCATATTGATGCTGCGCTGGAGCGGATGCGCGATAACGGCGCACCCGCCGATTTACTCAAAACACTGGGATTTTTGCTGAACAATTTACGCGCCATTGATGCCCAACTGGCAACAATTGAATCAGAACAGGCCCAGGCACTACCCCATAATAATGACGAAAATGAGCTCGCTGATGACAGCCCGCACGGGTTGAGTGATATCTGGCTGCGTCTTAGCCGTCACTTCACGCCGGAATCCGCCCTCTTCCGTCATGCGGTAAGAATGTCGCTGGTGTTGTGCTTCGGCTACGCCATCATTCAGATAACCGGAATGCATCACGGGTATTGGATCTTGCTGACAAGTTTGTTTGTCTGCCAGCCAAACTATAACGCCACGCGCCACCGCCTGAAGTTAAGGATTATTGGTACGCTGGTAGGTATCGCCATTGGCATTCCTGTGCTGTGGTTTGTGCCATCACTGGAAGGGCAGCTGGTGCTGCTGGTTATTACCGGCGTGCTCTTTTTTGCCTTCCGTAACGTGCAATACGCTCATGCAACGATGTTCATCACACTTTTGGTGCTACTGTGTTTTAACTTACTGGGTGAAGGTTTTGAAGTAGCGTTACCTCGCGTAATCGATACGCTGATTGGTTGTGCCATTGCGTGGGCGGCAGTGAGCTACATCTGGCCTGACTGGCAGTTTCGCAATCTGCCGCGCATGCTCGAACGCGCCACAGAGGCCAACTGTCGGTATCTCGATGCCATACTGGAGCAATACCATCAGGGGCGTGATAACCGTCTGGCGTATCGTATTGCCCGCCGCGATGCACACAACCGTGATGCTGAGCTGGCGTCGGTGGTATCAAATATGTCCAGCGAGCCGAACGTTACCCCGCAAATTCGCGAAGCCGCGTTTCGGTTGCTGTGCCTTAACCATACGTTTACCAGCTATATCTCAGCCCTCGGTGCTCACCGGGAGCAGTTAACTAATCCTGAAATTCTGGCGTTTCTTGATGACGCAGTTTGCTATGTTGATGACGCGTTACATCATCAACCTGCTGATGAAGAACGCGTCAATGAGGCATTAGCTAGCCTGAAACAGCGGATGCAGCAACTTGAACCACGGGCAGACAGCAAAGAACCTCTGGTCGTACAACAAGTTGGATTATTGATTGCATTACTGCCTGAGATTGGTCGTCTGCAACGCCAGATTACTCAAGTTCCGCAGGAAACTCCTGTTTCGGCGTAA", + "dna_sequence_length": 2154, + "functions": [ + "putative transporter, FUSC superfamily inner membrane protein" + ], + "id": "CDS_941", + "location": [ + [ + "NC_000913", + 1023883, + "-", + 2154 + ] + ], + "md5": "f701199722bdd0f2774a7eefd0c0a98c", + "parent_gene": "", + "protein_md5": "b1ea4794c101c1adb2ac814a81fb0e94", + "protein_translation": "MLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDQSQAPLYDLALANGLLMATLNQTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESALFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRADSKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA", + "protein_translation_length": 717, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003253" + ], + [ + "gene_synonym", + "ECK0952" + ], + [ + "gene_synonym", + "EcoGene:EG12306" + ], + [ + "gene_synonym", + "GI:16128928" + ], + [ + "gene_synonym", + "GeneID:945594" + ], + [ + "gene_synonym", + "JW0944" + ], + [ + "gene_synonym", + "NP_415481.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB12" + ], + [ + "gene_synonym", + "b0961" + ], + [ + "gene_synonym", + "yccF" + ] + ], + "dna_sequence": "ATGCGTACCGTTTTGAACATTCTGAACTTTGTGCTTGGCGGATTTGCCACCACTCTGGGCTGGCTGTTGGCGACTCTGGTCAGTATTGTGCTGATTTTTACCTTACCGCTGACACGATCCTGCTGGGAGATCACTAAACTGTCTCTGGTGCCTTATGGCAATGAAGCTATTCATGTCGATGAACTGAACCCGGCTGGCAAAAATGTGCTGCTGAATACTGGCGGTACGGTATTGAATATTTTCTGGCTGATTTTCTTTGGCTGGTGGTTATGCCTGATGCACATTGCAACGGGCATCGCACAATGTATTTCAATCATTGGCATTCCTGTCGGCATTGCGAACTTTAAAATTGCCGCTATTGCACTATGGCCGGTTGGTCGTCGCGTGGTATCGGTAGAAACAGCGCAAGCTGCGCGTGAAGCCAATGCACGTCGTCGTTTTGAATAA", + "dna_sequence_length": 447, + "functions": [ + "DUF307 family inner membrane protein" + ], + "id": "CDS_942", + "location": [ + [ + "NC_000913", + 1024348, + "-", + 447 + ] + ], + "md5": "d19725d7881ccc94129e66d6b2836712", + "parent_gene": "", + "protein_md5": "c72ccfd5cce3382ae775701ab1be4741", + "protein_translation": "MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003257" + ], + [ + "gene_synonym", + "ECK0953" + ], + [ + "gene_synonym", + "EcoGene:EG10426" + ], + [ + "gene_synonym", + "GI:16128929" + ], + [ + "gene_synonym", + "GeneID:946227" + ], + [ + "gene_synonym", + "JW0945" + ], + [ + "gene_synonym", + "NP_415482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15038" + ], + [ + "gene_synonym", + "b0962" + ], + [ + "gene_synonym", + "helD" + ], + [ + "gene_synonym", + "srjB" + ] + ], + "dna_sequence": "ATGGAACTGAAAGCGACAACGCTTGGAAAACGTCTGGCACAGCACCCTTACGATCGGGCGGTGATCCTCAATGCCGGGATTAAAGTCTCCGGCGATCGCCACGAATACCTTATTCCTTTCAATCAATTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCAGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGACGCGTGAGCAAACCTCTGGCGTGCAGCAACAAATCCGCCAGGCTTTGTCGGCGTTGCCGTTGCCGGTTAACCGACTGGAAGAATTCGATAACTGCCGTGAGGCGTGGCGTAAATGTCAGGCCTGGTTGAAAGATATTGAAAGCGCTCGGTTGCAGCATAACCAGGCGTATACCGAAGCCATGCTTACCGAGTATGCGGATTTTTTCCGCCAGGTCGAGTCTTCACCGCTGAATCCGGCGCAGGCCCGGGCAGTCGTTAATGGCGAGCATTCTCTGTTAGTGCTGGCAGGTGCAGGAAGCGGAAAAACGTCGGTGCTGGTGGCCCGTGCAGGCTGGTTGCTGGCGCGTGGTGAAGCGTCCCCTGAGCAAATTTTATTGCTGGCGTTTGGTCGCAAAGCCGCTGAAGAGATGGACGAGCGGATTCGCGAACGGCTACATACCGAAGACATTACCGCACGCACGTTTCATGCGCTGGCGCTGCATATTATTCAGCAGGGCAGCAAAAAAGTTCCGATAGTCAGCAAACTGGAAAATGATACCGCTGCCCGTCATGAACTCTTTATTGCTGAGTGGCGCAAGCAATGCAGCGAAAAGAAAGCGCAGGCGAAGGGCTGGCGGCAATGGCTGACGGAAGAAATGCAGTGGTCAGTGCCAGAAGGTAACTTCTGGGATGATGAAAAATTACAGCGTCGCCTTGCCTCTCGCCTCGATCGCTGGGTAAGTCTGATGCGGATGCACGGTGGTGCACAGGCAGAAATGATTGCCAGTGCACCCGAAGAGATTCGCGATCTGTTCAGTAAACGTATCAAGTTGATGGCCCCGTTATTAAAAGCCTGGAAAGGTGCGCTGAAGGCAGAAAACGCTGTCGATTTTTCGGGCCTTATTCATCAGGCGATTGTGATTCTGGAGAAAGGTCGCTTTATCAGCCCGTGGAAGCATATTCTGGTTGATGAATTTCAGGATATCTCGCCGCAGCGGGCAGCGTTGTTAGCGGCATTACGCAAGCAAAACAGTCAGACGACGTTGTTCGCTGTTGGTGATGACTGGCAGGCGATTTACCGATTCAGCGGTGCGCAAATGTCGCTCACCACCGCTTTCCATGAAAACTTTGGTGAAGGCGAACGCTGTGATTTAGACACGACTTACCGTTTTAACAGTCGTATCGGTGAGGTGGCAAACCGGTTTATTCAGCAGAACCCAGGCCAGCTGAAAAAGCCGCTAAACAGCTTAACCAATGGAGACAAAAAAGCCGTCACGTTATTGGATGAGAGTCAACTTGACGCTTTGCTGGATAAGCTCTCTGGTTATGCCAAACCGGAAGAGCGCATTCTGATCCTGGCGCGTTACCATCACATGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAATCGACTTTATGACCATTCATGCCAGCAAAGGGCAACAGGCGGATTACGTCATCATCGTTGGCTTGCAGGAGGGAAGTGATGGTTTTCCGGCTGCGGCGCGGGAGTCGATTATGGAAGAGGCGCTACTGCCACCGGTTGAGGATTTCCCGGACGCTGAAGAACGGCGGTTAATGTACGTGGCGCTGACCCGGGCACGCCATCGGGTATGGGCACTGTTTAACAAAGAGAATCCCTCTCCCTTTGTGGAAATACTGAAAAATCTGGATGTGCCGGTGGCGAGAAAACCGTAA", + "dna_sequence_length": 2055, + "functions": [ + "DNA helicase IV" + ], + "id": "CDS_943", + "location": [ + [ + "NC_000913", + 1024471, + "+", + 2055 + ] + ], + "md5": "963dfa070bc50289e9741f0129073674", + "parent_gene": "", + "protein_md5": "20f8059bd87a7e01db92e50ff870e215", + "protein_translation": "MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARKP", + "protein_translation_length": 684, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003259" + ], + [ + "gene_synonym", + "ECK0954" + ], + [ + "gene_synonym", + "EcoGene:EG12307" + ], + [ + "gene_synonym", + "GI:90111195" + ], + [ + "gene_synonym", + "GeneID:945574" + ], + [ + "gene_synonym", + "JW5129" + ], + [ + "gene_synonym", + "NP_415483.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A731" + ], + [ + "gene_synonym", + "b0963" + ], + [ + "gene_synonym", + "mgs" + ], + [ + "gene_synonym", + "mgsA" + ], + [ + "gene_synonym", + "yccG" + ] + ], + "dna_sequence": "ATGGAACTGACGACTCGCACTTTACCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAACGGCATCAACCGTTACTGGAACAACACGTACTGTATGCAACAGGCACTACCGGTAACTTAATTTCCCGCGCGACCGGCATGAACGTCAACGCGATGTTGAGTGGCCCAATGGGGGGTGACCAGCAGGTTGGCGCATTGATCTCAGAAGGGAAAATTGATGTATTGATTTTCTTCTGGGATCCACTAAATGCCGTGCCGCACGATCCTGACGTGAAAGCCTTGCTGCGTCTGGCGACGGTATGGAACATTCCGGTCGCCACCAACGTGGCAACGGCAGACTTCATAATCCAGTCGCCGCATTTCAACGACGCGGTCGATATTCTGATCCCCGATTATCAGCGTTATCTCGCGGACCGTCTGAAGTAA", + "dna_sequence_length": 459, + "functions": [ + "methylglyoxal synthase" + ], + "id": "CDS_944", + "location": [ + [ + "NC_000913", + 1027015, + "-", + 459 + ] + ], + "md5": "67ca7571a170cc5981b5d478b8d87b0e", + "parent_gene": "", + "protein_md5": "0b784f1e718cda3780049f188bca61c1", + "protein_translation": "MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003262" + ], + [ + "gene_synonym", + "ECK0955" + ], + [ + "gene_synonym", + "EcoGene:EG13722" + ], + [ + "gene_synonym", + "GI:16128931" + ], + [ + "gene_synonym", + "GeneID:945577" + ], + [ + "gene_synonym", + "JW0947" + ], + [ + "gene_synonym", + "NP_415484.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8X4" + ], + [ + "gene_synonym", + "b0964" + ], + [ + "gene_synonym", + "yccT" + ] + ], + "dna_sequence": "ATGAAAACCGGCATCGTGACCACCTTGATTGCATTATGTTTGCCGGTATCCGTTTTTGCCACCACGCTGCGGCTTTCAACCGATGTCGATCTTCTGGTACTCGACGGCAAGAAGGTTTCCAGCTCTCTGCTGCGCGGTGCGGACAGCATTGAACTGGATAATGGACCGCATCAGTTAGTGTTTCGCGTTGAGAAGACGATTCATCTTTCCAATAGTGAAGAACGGCTGTATATCTCCCCACCGCTGGTGGTCAGTTTTAATACCCAGCTCATCAACCAGGTCAATTTTCGCCTGCCTCGCCTGGAGAATGAGCGGGAAGCTAACCATTTTGATGCCGCGCCGCGCCTTGAATTGTTGGATGGCGATGCGACGCCGATTCCGGTAAAGCTGGATATTCTCGCCATTACCTCAACGGCAAAAACGATTGATTATGAGGTCGAGGTTGAACGCTATAACAAATCCGCGAAACGCGCTTCACTACCGCAATTTGCCACGATGATGGCAGATGACAGTACGCTGCTTTCGGGTGTTTCCGAGCTGGATGCTATTCCACCGCAGTCTCAGGTGCTCACAGAACAACGGCTGAAGTATTGGTTTAAACTGGCTGACCCACAAACGCGAAATACTTTCCTGCAGTGGGCGGAAAAACAACCATCTTCCTGA", + "dna_sequence_length": 663, + "functions": [ + "UPF0319 family protein" + ], + "id": "CDS_945", + "location": [ + [ + "NC_000913", + 1027773, + "-", + 663 + ] + ], + "md5": "7bba9bbafddf57d210f7a174b88cf853", + "parent_gene": "", + "protein_md5": "01f69ff97eb2baf3793e4041dd5e9dfe", + "protein_translation": "MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003267" + ], + [ + "gene_synonym", + "ECK0956" + ], + [ + "gene_synonym", + "EcoGene:EG13723" + ], + [ + "gene_synonym", + "GI:90111196" + ], + [ + "gene_synonym", + "GeneID:949008" + ], + [ + "gene_synonym", + "JW5130" + ], + [ + "gene_synonym", + "NP_415485.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75874" + ], + [ + "gene_synonym", + "b0965" + ], + [ + "gene_synonym", + "yccU" + ] + ], + "dna_sequence": "ATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGCAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGCTGGCAGACGTTCCGGAAAAAGTCGATATGGTCGATGTTTTCCGTAATTCAGAAGCGGCGTGGGGCGTGGCACAGGAAGCTATTGCCATTGGCGCGAAAACTCTCTGGATGCAACTGGGGGTGATTAATGAGCAAGCGGCAGTACTGGCACGGGATGCCGGGTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAA", + "dna_sequence_length": 414, + "functions": [ + "putative CoA-binding protein" + ], + "id": "CDS_946", + "location": [ + [ + "NC_000913", + 1027946, + "+", + 414 + ] + ], + "md5": "cb059e9caccf6a69b8dc0a5f0255a15b", + "parent_gene": "", + "protein_md5": "4b892b3a20ad0325ba607d03b9f71716", + "protein_translation": "MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQKGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003269" + ], + [ + "gene_synonym", + "ECK0957" + ], + [ + "gene_synonym", + "EcoGene:EG13724" + ], + [ + "gene_synonym", + "GI:145698238" + ], + [ + "gene_synonym", + "GeneID:945578" + ], + [ + "gene_synonym", + "JW5970" + ], + [ + "gene_synonym", + "NP_415486.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB20" + ], + [ + "gene_synonym", + "b0966" + ], + [ + "gene_synonym", + "hspQ" + ], + [ + "gene_synonym", + "yccV" + ] + ], + "dna_sequence": "ATGATTGCCAGCAAATTCGGTATCGGCCAGCAGGTCCGCCATTCCCTGTTAGGTTATCTCGGAGTGGTCGTGGATATCGACCCGGTTTATTCGCTCTCTGAACCGTCGCCTGATGAGCTGGCGGTGAATGACGAGCTTCGCGCCGCTCCGTGGTATCACGTAGTGATGGAGGACGATAACGGCCTACCGGTTCATACCTACCTGGCTGAAGCCCAGCTAAGTAGCGAATTGCAGGATGAACATCCTGAACAGCCATCCATGGATGAGCTGGCGCAGACCATCCGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAA", + "dna_sequence_length": 318, + "functions": [ + "heat shock protein involved in degradation of mutant DnaA", + "hemimethylated oriC DNA-binding protein" + ], + "id": "CDS_947", + "location": [ + [ + "NC_000913", + 1028721, + "-", + 318 + ] + ], + "md5": "f28c0bd1f593c101ae2d2ae2c68dba00", + "parent_gene": "", + "protein_md5": "b39bfa938221d3624fb3e59b2337251e", + "protein_translation": "MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003272" + ], + [ + "gene_synonym", + "ECK0958" + ], + [ + "gene_synonym", + "EcoGene:EG13725" + ], + [ + "gene_synonym", + "GI:145698239" + ], + [ + "gene_synonym", + "GeneID:946691" + ], + [ + "gene_synonym", + "JW5898" + ], + [ + "gene_synonym", + "NP_415487.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75876" + ], + [ + "gene_synonym", + "b0967" + ], + [ + "gene_synonym", + "rlmI" + ], + [ + "gene_synonym", + "yccW" + ] + ], + "dna_sequence": "ATGAGTGTACGTTTAGTGTTAGCCAAAGGGCGCGAAAAATCATTACTTCGTCGCCATCCGTGGGTCTTTTCCGGGGCCGTTGCCCGCATGGAAGGTAAAGCCAGCCTCGGTGAAACCATCGATATTGTTGATCATCAGGGAAAATGGTTAGCACGCGGCGCTTATTCGCCAGCTTCGCAAATCCGGGCGCGCGTCTGGACGTTTGACCCGTCTGAGTCTATCGACATTGCTTTTTTTTCCCGCCGTTTGCAACAAGCACAAAAATGGCGTGACTGGCTGGCGCAAAAAGATGGCCTCGACAGCTATCGTTTAATCGCCGGAGAATCTGATGGCCTGCCGGGTATTACTATCGATCGTTTCGGTAATTTTCTGGTGCTGCAACTGCTGAGTGCTGGGGCAGAATATCAGCGCGCGGCATTAATTAGTGCCCTGCAAACGCTGTACCCGGAATGTTCGATTTACGATCGCAGCGACGTCGCGGTACGTAAAAAAGAAGGAATGGAGCTGACCCAGGGCCCCGTCACCGGCGAGTTGCCACCTGCCCTGCTGCCGATTGAAGAACACGGAATGAAACTGCTGGTGGATATTCAGCACGGACACAAAACGGGCTACTACCTGGACCAGCGTGATAGCCGCCTGGCTACCCGCCGCTACGTTGAAAATAAACGTGTGCTGAACTGTTTCTCCTATACCGGTGGTTTCGCCGTATCGGCACTGATGGGCGGTTGCAGCCAGGTTGTCAGCGTTGATACCTCCCAGGAAGCGCTGGATATTGCACGGCAGAACGTTGAGCTGAACAAACTGGATCTGAGCAAGGCTGAGTTTGTCCGTGATGATGTCTTTAAATTGCTGCGTACTTATCGCGATCGCGGTGAAAAATTTGACGTTATCGTGATGGACCCGCCGAAGTTTGTTGAGAATAAAAGCCAGTTGATGGGCGCGTGTCGTGGTTATAAAGACATCAACATGCTGGCGATTCAGCTGCTGAATGAAGGCGGTATTCTCCTGACTTTCTCCTGTTCCGGTCTGATGACCAGCGATTTATTTCAGAAAATCATCGCGGATGCCGCAATTGATGCCGGTCGTGATGTACAATTTATAGAGCAGTTCCGTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAA", + "dna_sequence_length": 1191, + "functions": [ + "23S rRNA m(5)C1962 methyltransferase, SAM-dependent" + ], + "id": "CDS_948", + "location": [ + [ + "NC_000913", + 1029969, + "-", + 1191 + ] + ], + "md5": "2e03234b6f8b72e7b5fd8c436fb1f2bd", + "parent_gene": "", + "protein_md5": "517bba5c696b1624b2e7a3441e00b9d9", + "protein_translation": "MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003276" + ], + [ + "gene_synonym", + "ECK0959" + ], + [ + "gene_synonym", + "EcoGene:EG13726" + ], + [ + "gene_synonym", + "GI:16128935" + ], + [ + "gene_synonym", + "GeneID:945304" + ], + [ + "gene_synonym", + "JW5131" + ], + [ + "gene_synonym", + "NP_415488.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB65" + ], + [ + "gene_synonym", + "b0968" + ], + [ + "gene_synonym", + "yccX" + ] + ], + "dna_sequence": "ATGTCGAAAGTCTGCATAATTGCCTGGGTTTACGGGCGAGTTCAGGGCGTAGGATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCTTGCGGTGAAGAAGGGCAGGTGGAAAAATTAATGCAGTGGTTAAAGAGTGGCGGCCCGCGTTCTGCGCGTGTAGAACGGGTGCTCAGCGAGCCGCATCATCCCTCGGGGGAATTAACCGATTTTCGTATCCGTTAA", + "dna_sequence_length": 279, + "functions": [ + "weak acylphosphatase" + ], + "id": "CDS_949", + "location": [ + [ + "NC_000913", + 1030064, + "+", + 279 + ] + ], + "md5": "b348560561e8074a7faa78cb360bdf60", + "parent_gene": "", + "protein_md5": "cd83cab5cc9df4753f5e7611f601ecab", + "protein_translation": "MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003278" + ], + [ + "gene_synonym", + "ECK0960" + ], + [ + "gene_synonym", + "EcoGene:EG12876" + ], + [ + "gene_synonym", + "GI:90111197" + ], + [ + "gene_synonym", + "GeneID:945023" + ], + [ + "gene_synonym", + "JW0952" + ], + [ + "gene_synonym", + "NP_415489.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB18" + ], + [ + "gene_synonym", + "b0969" + ], + [ + "gene_synonym", + "tusE" + ], + [ + "gene_synonym", + "yccK" + ] + ], + "dna_sequence": "ATGCTGATCTTCGAAGGTAAAGAGATAGAAACGGATACCGAAGGCTATCTCAAAGAAAGCAGCCAGTGGAGTGAGCCGCTGGCTGTGGTGATTGCAGAGAACGAAGGGATTTCGCTGTCACCGGAACACTGGGAAGTGGTGCGTTTTGTGCGTGATTTCTATCTGGAATTCAATACTTCTCCGGCGATTCGTATGCTGGTAAAAGCGATGGCGAATAAATTTGGCGAAGAAAAAGGTAACAGCCGCTATTTATACCGACTGTTTCCGAAAGGTCCGGCTAAGCAAGCCACCAAAATTGCTGGCCTGCCAAAACCGGTAAAATGTATTTAA", + "dna_sequence_length": 330, + "functions": [ + "mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase" + ], + "id": "CDS_950", + "location": [ + [ + "NC_000913", + 1030668, + "-", + 330 + ] + ], + "md5": "6e5df5f6beedd5881891299820519bb7", + "parent_gene": "", + "protein_md5": "261ee94e79757dc5d341bc860914cd1a", + "protein_translation": "MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003280" + ], + [ + "gene_synonym", + "ECK0961" + ], + [ + "gene_synonym", + "EcoGene:EG11113" + ], + [ + "gene_synonym", + "GI:16128937" + ], + [ + "gene_synonym", + "GeneID:946016" + ], + [ + "gene_synonym", + "JW0953" + ], + [ + "gene_synonym", + "NP_415490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAC6" + ], + [ + "gene_synonym", + "b0970" + ], + [ + "gene_synonym", + "yccA" + ] + ], + "dna_sequence": "ATGGATCGTATTGTTAGTTCTTCACATGACCGTACATCACTGCTTAGCACCCATAAGGTGCTGCGTAATACCTATTTTCTGCTGAGCCTGACGCTGGCCTTTTCGGCGATTACCGCAACTGCCAGTACGGTGCTGATGCTGCCATCTCCGGGTCTGATTCTGACGCTGGTGGGTATGTATGGTTTGATGTTCCTGACCTATAAAACGGCGAATAAGCCGACCGGGATTATCTCCGCATTCGCCTTTACCGGTTTTCTGGGTTATATCCTCGGACCTATTCTGAACACCTATCTGTCTGCCGGAATGGGTGACGTAATCGCTATGGCACTGGGCGGAACGGCGTTAGTGTTCTTCTGCTGCTCTGCATATGTGCTGACCACCCGCAAAGATATGTCGTTCCTCGGCGGTATGCTGATGGCGGGTATTGTGGTGGTGCTGATTGGTATGGTTGCGAATATCTTCCTGCAGCTGCCTGCTCTGCATCTGGCGATCAGCGCGGTCTTCATTCTGATCTCCTCTGGCGCTATCTTGTTTGAAACCAGCAACATCATTCATGGCGGTGAGACGAACTATATTCGTGCCACGGTTAGCCTGTATGTTTCGCTGTACAACATCTTCGTCAGCCTGCTGAGCATTCTGGGCTTCGCTAGCCGCGATTAA", + "dna_sequence_length": 660, + "functions": [ + "Modulator of FtsH protease, inner membrane protein" + ], + "id": "CDS_951", + "location": [ + [ + "NC_000913", + 1031418, + "-", + 660 + ] + ], + "md5": "26210ec2a9871cfaab29dfb1ef1e9b03", + "parent_gene": "", + "protein_md5": "876dc3992dc25108fa8cc0e9b1bc8d16", + "protein_translation": "MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003286" + ], + [ + "gene_synonym", + "ECK0963" + ], + [ + "gene_synonym", + "EcoGene:EG10468" + ], + [ + "gene_synonym", + "GI:16128938" + ], + [ + "gene_synonym", + "GeneID:945579" + ], + [ + "gene_synonym", + "JW0954" + ], + [ + "gene_synonym", + "NP_415491.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69739" + ], + [ + "gene_synonym", + "b0972" + ], + [ + "gene_synonym", + "hyaA" + ] + ], + "dna_sequence": "ATGAATAACGAGGAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGGAATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGCGGAAGAAGTCTTTGAAGACATCATCACGCAATACAATGGCAAATATATCCTCGCAGTAGAAGGTAATCCGCCGCTGGGCGAGCAGGGGATGTTCTGTATCAGCAGCGGTCGACCGTTTATTGAGAAACTCAAACGTGCCGCTGCCGGAGCCAGCGCGATTATCGCCTGGGGAACCTGCGCGTCCTGGGGCTGCGTGCAGGCCGCGCGACCCAATCCGACGCAGGCAACGCCTATCGACAAAGTCATCACCGACAAACCCATTATCAAAGTACCTGGCTGCCCGCCGATCCCGGATGTGATGAGCGCCATCATTACTTACATGGTGACCTTTGATCGCTTGCCAGATGTCGACAGAATGGGCCGTCCGCTGATGTTCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTACTGCCTGTACAAAATGGGCTGCAAAGGGCCTACCACCTATAACGCCTGTTCCTCCACACGCTGGAATGATGGCGTTTCTTTCCCAATCCAGTCTGGTCACGGCTGCCTGGGCTGTGCGGAAAATGGTTTCTGGGATCGCGGTTCGTTCTACAGCCGCGTGGTCGATATTCCGCAAATGGGTACTCATTCCACCGCCGATACCGTCGGTTTAACCGCGCTTGGCGTGGTGGCAGCGGCTGTTGGTGTGCACGCAGTCGCCAGCGCCGTTGACCAGCGCAGACGTCATAACCAGCAACCTACAGAAACCGAACATCAGCCAGGCAATGAGGATAAACAGGCATGA", + "dna_sequence_length": 1119, + "functions": [ + "hydrogenase 1, small subunit" + ], + "id": "CDS_952", + "location": [ + [ + "NC_000913", + 1032139, + "+", + 1119 + ] + ], + "md5": "cc9bed8786fd497dbddd72daaf0d8843", + "parent_gene": "", + "protein_md5": "dc8ab3c05eace93812417bcdcbf160b7", + "protein_translation": "MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAWALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGVVAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003288" + ], + [ + "gene_synonym", + "ECK0964" + ], + [ + "gene_synonym", + "EcoGene:EG10469" + ], + [ + "gene_synonym", + "GI:16128939" + ], + [ + "gene_synonym", + "GeneID:945580" + ], + [ + "gene_synonym", + "JW0955" + ], + [ + "gene_synonym", + "NP_415492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACD8" + ], + [ + "gene_synonym", + "b0973" + ], + [ + "gene_synonym", + "hyaB" + ] + ], + "dna_sequence": "ATGAGCACTCAGTACGAAACTCAGGGATACACCATCAATAATGCCGGACGCCGCCTGGTGGTCGACCCGATTACGCGCATCGAAGGCCACATGCGCTGCGAAGTGAATATTAACGATCAGAATGTGATCACCAATGCCGTCTCCTGCGGCACCATGTTTCGCGGGCTGGAGATCATCCTACAAGGGCGCGACCCGCGCGATGCGTGGGCGTTCGTTGAACGTATCTGCGGCGTCTGTACTGGCGTACACGCCCTGGCTTCGGTTTACGCCATCGAAGATGCTATCGGTATTAAAGTGCCGGACAACGCCAATATCATCCGCAACATTATGCTGGCAACGCTCTGGTGCCACGATCATCTGGTGCACTTCTATCAGCTTGCCGGGATGGACTGGATCGATGTGTTAGATGCGCTGAAAGCCGACCCGCGGAAAACCTCCGAACTGGCGCAAAGTCTCTCCTCTTGGCCGAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTACTGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGTGAAATTGTCAAAATCCACGCGGTCTTTGGCGGTAAAAACCCGCATCCAAACTGGATTGTCGGCGGGATGCCTTGCGCCATCAACATTGACGAAAGCGGCGCGGTCGGGGCAGTCAATATGGAACGCCTGAACCTGGTGCAGTCAATTATCACCCGCACGGCGGACTTCATTAACAACGTGATGATCCCCGACGCCTTAGCCATCGGTCAGTTCAACAAACCGTGGAGCGAAATCGGCACTGGTCTTTCTGATAAATGCGTTCTCAGCTACGGCGCATTCCCGGATATTGCCAACGACTTTGGCGAGAAAAGTCTGCTGATGCCTGGCGGCGCGGTGATTAACGGCGACTTCAACAATGTGCTGCCAGTGGATTTGGTTGATCCGCAGCAGGTGCAGGAGTTTGTCGACCACGCCTGGTATCGATATCCCAACGATCAGGTCGGGCGTCATCCGTTCGATGGCATCACCGACCCGTGGTACAACCCCGGCGATGTCAAAGGCAGCGATACCAACATTCAGCAGCTGAATGAACAGGAACGCTACTCGTGGATCAAAGCGCCACGCTGGCGCGGTAACGCGATGGAAGTGGGGCCGCTGGCGCGCACGTTAATCGCTTATCACAAAGGCGATGCTGCGACCGTTGAGTCGGTCGATCGCATGATGTCGGCGTTGAACCTGCCGCTTTCCGGTATCCAGTCAACGTTAGGCCGCATTTTGTGCCGCGCGCACGAAGCGCAGTGGGCCGCAGGTAAGTTGCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATCCCCGAGCAACCGCTGGAGATCCTGCGTACTCTGCACAGCTTTGACCCGTGCCTCGCCTGTTCAACACACGTGCTGGGCGACGACGGTAGCGAGCTGATCTCCGTGCAGGTGCGTTAA", + "dna_sequence_length": 1794, + "functions": [ + "hydrogenase 1, large subunit" + ], + "id": "CDS_953", + "location": [ + [ + "NC_000913", + 1033254, + "+", + 1794 + ] + ], + "md5": "eecc7488eff5d48dd2ed69814c514919", + "parent_gene": "", + "protein_md5": "d45584d250ec0dca5d34f5bd15067a15", + "protein_translation": "MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMIPDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNVLPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLGRILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAPRGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEILRTLHSFDPCLACSTHVLGDDGSELISVQVR", + "protein_translation_length": 597, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003290" + ], + [ + "gene_synonym", + "ECK0965" + ], + [ + "gene_synonym", + "EcoGene:EG10470" + ], + [ + "gene_synonym", + "GI:16128940" + ], + [ + "gene_synonym", + "GeneID:945581" + ], + [ + "gene_synonym", + "JW0956" + ], + [ + "gene_synonym", + "NP_415493.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAM1" + ], + [ + "gene_synonym", + "b0974" + ], + [ + "gene_synonym", + "hyaC" + ] + ], + "dna_sequence": "ATGCAACAGAAAAGCGACAACGTTGTCAGCCACTATGTCTTTGAAGCGCCAGTGCGCATCTGGCACTGGTTGACGGTGTTATGCATGGCGGTGTTGATGGTCACCGGATACTTTATCGGCAAGCCGCTACCTTCCGTCAGCGGCGAGGCGACGTATCTGTTCTATATGGGCTACATCAGGTTAATTCACTTCAGCGCCGGGATGGTTTTTACCGTGGTTTTGCTGATGCGGATCTACTGGGCTTTTGTTGGCAATCGATACTCCCGCGAGCTGTTTATCGTGCCGGTATGGCGTAAAAGCTGGTGGCAGGGCGTGTGGTATGAAATCCGCTGGTATCTGTTTCTGGCAAAACGTCCGAGTGCCGATATAGGCCATAATCCCATCGCCCAGGCGGCGATGTTCGGCTATTTCCTGATGTCGGTCTTTATGATCATCACTGGTTTTGCGCTGTACAGCGAACACAGCCAGTACGCTATTTTTGCGCCGTTCCGTTATGTGGTGGAATTTTTCTACTGGACGGGTGGCAACTCAATGGACATTCACAGCTGGCATCGGCTGGGGATGTGGCTGATTGGCGCGTTTGTGATCGGTCATGTCTACATGGCGCTGCGTGAAGACATCATGTCCGACGACACGGTGATCTCCACCATGGTCAACGGCTACCGTAGCCACAAATTTGGCAAAATAAGTAACAAGGAGCGTTCATGA", + "dna_sequence_length": 708, + "functions": [ + "hydrogenase 1, b-type cytochrome subunit" + ], + "id": "CDS_954", + "location": [ + [ + "NC_000913", + 1035066, + "+", + 708 + ] + ], + "md5": "40445378b1eab7fa1c633b09a4f0c8b6", + "parent_gene": "", + "protein_md5": "ab1cbcd0eedf4d4c97cc1238f46674f4", + "protein_translation": "MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003292" + ], + [ + "gene_synonym", + "ECK0966" + ], + [ + "gene_synonym", + "EcoGene:EG10471" + ], + [ + "gene_synonym", + "GI:16128941" + ], + [ + "gene_synonym", + "GeneID:945575" + ], + [ + "gene_synonym", + "JW0957" + ], + [ + "gene_synonym", + "NP_415494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19930" + ], + [ + "gene_synonym", + "b0975" + ], + [ + "gene_synonym", + "hyaD" + ] + ], + "dna_sequence": "ATGAGCGAGCAACGCGTGGTGGTCATGGGGCTGGGCAACCTGCTGTGGGCCGATGAAGGCTTCGGCGTGCGGGTGGCGGAACGGCTGTATGCCCATTACCACTGGCCCGAGTATGTGGAGATTGTCGATGGCGGTACTCAGGGACTGAACTTGCTGGGGTATGTCGAAAGCGCCAGCCATCTGTTGATTCTCGATGCCATTGACTACGGGCTGGAACCTGGAACGCTGCGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCTGCGGAACAGGCGGCGCTGGCGCAGCTTGCTGCGTGGGGAATTGTGCCGCAACCGGCTAATGAATCGCGCTGTCTCAATTATGACTGTCTGTCGATGGAAAATTACGAAGGCGTTCGCTTGCGCCAGTACCGGATGACACAGGAGGAGCAGGGATGA", + "dna_sequence_length": 588, + "functions": [ + "hydrogenase 1 maturation protease" + ], + "id": "CDS_955", + "location": [ + [ + "NC_000913", + 1035770, + "+", + 588 + ] + ], + "md5": "e26eb96ebd9dc5dad5e0909af4dd4528", + "parent_gene": "", + "protein_md5": "5952a411eac57271b825b8d39b72bef0", + "protein_translation": "MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDGGTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSEVLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVPQPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003294" + ], + [ + "gene_synonym", + "ECK0967" + ], + [ + "gene_synonym", + "EcoGene:EG10472" + ], + [ + "gene_synonym", + "GI:16128942" + ], + [ + "gene_synonym", + "GeneID:945573" + ], + [ + "gene_synonym", + "JW0958" + ], + [ + "gene_synonym", + "NP_415495.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19931" + ], + [ + "gene_synonym", + "b0976" + ], + [ + "gene_synonym", + "hyaE" + ] + ], + "dna_sequence": "ATGAGCAACGACACGCCATTTGATGCGTTGTGGCAACGAATGCTGGCGCGCGGCTGGACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTGAGCAGAGCGAAGCCATCGGCGATCGCTTTGGCGTCTTTCGCTTTCCTGCCACTTTAGTGTTTACCGGCGGAAACTATCGCGGCGTGCTGAATGGTATTCACCCGTGGGCGGAACTGATAAACCTGATGCGCGGGCTTGTCGAACCGCAGCAGGAGCGTGCCTCATGA", + "dna_sequence_length": 399, + "functions": [ + "putative HyaA chaperone" + ], + "id": "CDS_956", + "location": [ + [ + "NC_000913", + 1036354, + "+", + 399 + ] + ], + "md5": "6a3ba37f2bf824d37318127a754a98b0", + "parent_gene": "", + "protein_md5": "c79a8d3d94a915e99f5361bf6550c242", + "protein_translation": "MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003296" + ], + [ + "gene_synonym", + "ECK0968" + ], + [ + "gene_synonym", + "EcoGene:EG10473" + ], + [ + "gene_synonym", + "GI:16128943" + ], + [ + "gene_synonym", + "GeneID:945572" + ], + [ + "gene_synonym", + "JW0959" + ], + [ + "gene_synonym", + "NP_415496.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19932" + ], + [ + "gene_synonym", + "b0977" + ], + [ + "gene_synonym", + "hyaF" + ] + ], + "dna_sequence": "ATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAACGATGACAGTTTCAGCATGAATCCACTGCCGATCACCTGTCAGGTGAATGATGAACCGAGTATGGCGGCCCTGGAGCAATGTGCTCACAGCCCGCAGGTGATTGCGCTGTTAAACGAGTTACAACATCAACTAAGCGAACGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCGACAGATTCGCTGTTACCGCCGCCCATTGATGGCCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTACGTAACCCCGACGCGCAGCCGCACAGCATTAATCTGACGCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGTGGCTGGCGGAAGCTGCACCGACGTAA", + "dna_sequence_length": 858, + "functions": [ + "hydrogenase-1 protein nickel incorporation factor" + ], + "id": "CDS_957", + "location": [ + [ + "NC_000913", + 1036749, + "+", + 858 + ] + ], + "md5": "75f318943dfae2fb677b12522a829041", + "parent_gene": "", + "protein_md5": "e2231f6b4a0bfe34b70b06836a27339f", + "protein_translation": "MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCAHSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPPIDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAEAAPT", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003300" + ], + [ + "gene_synonym", + "ECK0969" + ], + [ + "gene_synonym", + "EcoGene:EG11380" + ], + [ + "gene_synonym", + "GI:16128944" + ], + [ + "gene_synonym", + "GeneID:945585" + ], + [ + "gene_synonym", + "JW0960" + ], + [ + "gene_synonym", + "NP_415497.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26459" + ], + [ + "gene_synonym", + "appC" + ], + [ + "gene_synonym", + "b0978" + ], + [ + "gene_synonym", + "cbdA" + ], + [ + "gene_synonym", + "cyxA" + ] + ], + "dna_sequence": "ATGTGGGATGTCATTGATTTATCGCGCTGGCAGTTTGCTCTGACCGCGCTGTATCACTTTTTATTTGTACCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTATTATGGAAACCATTTACGTGGTCACCGGCAAAACAATCTACCGCGATATGACGCGCTTCTGGGGTAAGCTCTTCGGTATCAATTTTGCTCTTGGCGTGGCTACCGGCCTGACCATGGAGTTTCAGTTTGGTACTAACTGGTCATTCTATTCCAACTATGTGGGCGATATTTTTGGCGCACCGCTGGCGATGGAAGCATTAATGGCCTTCTTCCTCGAATCCACCTTTGTCGGGCTGTTCTTCTTCGGCTGGCAACGGCTGAATAAATACCAGCACCTGCTGGTGACGTGGCTGGTGGCGTTCGGTTCAAATCTCTCTGCGTTGTGGATATTGAATGCCAACGGTTGGATGCAATACCCGACCGGTGCGCATTTTGATATCGACACCCTGCGTATGGAGATGACCAGCTTCAGCGAGCTGGTCTTTAATCCGGTCAGCCAGGTGAAATTTGTGCACACCGTAATGGCGGGCTACGTGACCGGGGCCATGTTTATTATGGCGATCAGCGCCTGGTATTTACTGCGCGGACGGGAGCGCAATGTCGCATTACGCTCGTTTGCCATCGGTTCCGTCTTCGGTACTCTGGCGATTATCGGTACCCTGCAACTCGGAGACAGTTCTGCGTATGAAGTCGCGCAAGTACAACCGGTAAAACTGGCGGCGATGGAAGGGGAGTGGCAAACGGAACCTGCACCTGCACCGTTCCATGTGGTTGCCTGGCCGGAACAGGATCAAGAGCGTAACGCCTTTGCCCTCAAAATTCCCGCGCTGCTAGGGATCCTCGCCACTCACTCATTAGATAAACCCGTGCCGGGTCTGAAGAATTTGATGGCTGAAACCTACCCACGCTTGCAACGCGGACGTATGGCCTGGCTGTTAATGCAGGAAATATCGCAAGGCAATCGTGAGCCGCATGTGTTGCAGGCATTCCGGGGACTGGAAGGTGACCTGGGCTACGGCATGTTGCTCTCCCGCTATGCGCCGGATATGAATCATGTCACAGCCGCACAGTACCAGGCGGCGATGCGTGGCGCGATACCTCAGGTTGCGCCGGTATTCTGGAGTTTCCGCATCATGGTGGGCTGTGGTTCCCTGCTGCTACTGGTGATGCTGATTGCGCTTGTCCAGACGCTGCGTGGCAAAATCGACCAGCATCGCTGGGTGCTGAAAATGGCGCTCTGGAGTTTGCCGTTGCCGTGGATTGCGATTGAAGCCGGGTGGTTTATGACCGAGTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACTGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATGCAGAGTGAACAACCGACGCAGCAACAGGGGTAA", + "dna_sequence_length": 1545, + "functions": [ + "cytochrome bd-II oxidase, subunit I" + ], + "id": "CDS_958", + "location": [ + [ + "NC_000913", + 1037740, + "+", + 1545 + ] + ], + "md5": "d9c93dba192c3add66e50b0a85f60851", + "parent_gene": "", + "protein_md5": "7ac3135469ad2ed7ffd882f3c696a432", + "protein_translation": "MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG", + "protein_translation_length": 514, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003302" + ], + [ + "gene_synonym", + "ECK0970" + ], + [ + "gene_synonym", + "EcoGene:EG11379" + ], + [ + "gene_synonym", + "GI:16128945" + ], + [ + "gene_synonym", + "GeneID:947547" + ], + [ + "gene_synonym", + "JW0961" + ], + [ + "gene_synonym", + "NP_415498.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26458" + ], + [ + "gene_synonym", + "appB" + ], + [ + "gene_synonym", + "b0979" + ], + [ + "gene_synonym", + "cbdB" + ], + [ + "gene_synonym", + "cyxB" + ] + ], + "dna_sequence": "ATGTTTGATTATGAAACATTGCGCTTCATCTGGTGGCTGCTGATTGGCGTGATCCTGGTGGTCTTTATGATCTCCGACGGATTTGACATGGGGATCGGCTGTCTGCTGCCGCTGGTGGCGCGTAATGATGATGAACGCCGGATAGTGATAAACAGCGTTGGTGCACACTGGGAAGGCAACCAGGTCTGGTTGATCCTCGCTGGTGGGGCATTATTTGCCGCCTGGCCCAGAGTGTATGCAGCGGCGTTTTCCGGCTTTTATGTGGCGATGATCCTGGTGCTGTGCTCACTGTTCTTCCGCCCGCTGGCCTTTGATTATCGCGGAAAAATCGCCGATGCACGCTGGCGTAAAATGTGGGACGCCGGTCTGGTCATCGGCAGTCTGGTGCCGCCGGTAGTCTTCGGTATCGCCTTCGGCAACTTGTTGCTCGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCAACTGCTGACGCCATTCCCTTTATTGTGCGGATTGCTCAGCCTTGGGATGGTGATTTTGCAAGGTGGCGTCTGGTTACAACTGAAAACTGTTGGTGTGATTCATCTGCGTTCACAGCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGCTACTACAAAATGTGGGGGCGCATGACAACAGAAACTCTCCGCCGTAACGAAAACGAGTTGTACTAA", + "dna_sequence_length": 1137, + "functions": [ + "cytochrome bd-II oxidase, subunit II" + ], + "id": "CDS_959", + "location": [ + [ + "NC_000913", + 1039296, + "+", + 1137 + ] + ], + "md5": "43b025a0e30b4c77066a3dbed1462ebe", + "parent_gene": "", + "protein_md5": "2604795b96b4bfcd897590422134b767", + "protein_translation": "MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4402" + ], + [ + "gene_synonym", + "EcoGene:EG11114" + ], + [ + "gene_synonym", + "GI:145698240" + ], + [ + "gene_synonym", + "GeneID:948955" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24244" + ], + [ + "gene_synonym", + "YP_001165313.1" + ], + [ + "gene_synonym", + "appX" + ], + [ + "gene_synonym", + "b4592" + ], + [ + "gene_synonym", + "cbdX" + ], + [ + "gene_synonym", + "yccB" + ] + ], + "dna_sequence": "ATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAA", + "dna_sequence_length": 93, + "functions": [ + "putative cytochrome bd-II oxidase subunit" + ], + "id": "CDS_960", + "location": [ + [ + "NC_000913", + 1040445, + "+", + 93 + ] + ], + "md5": "6a7ea5dedd5f9c190ad69c9be66aa5f4", + "parent_gene": "", + "protein_md5": "ba88ee2c8ffa535d78ee61ad5a098427", + "protein_translation": "MWYLLWFVGILLMCSLSTLVLVWLDPRLKS", + "protein_translation_length": 30, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003305" + ], + [ + "gene_synonym", + "ECK0971" + ], + [ + "gene_synonym", + "EcoGene:EG10049" + ], + [ + "gene_synonym", + "GI:16128946" + ], + [ + "gene_synonym", + "GeneID:946206" + ], + [ + "gene_synonym", + "JW0963" + ], + [ + "gene_synonym", + "NP_415500.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07102" + ], + [ + "gene_synonym", + "appA" + ], + [ + "gene_synonym", + "b0980" + ] + ], + "dna_sequence": "ATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCAGTCGTCATGGTGTGCGTGCTCCAACCAAGGCCACGCAACTGATGCAGGATGTCACCCCAGACGCATGGCCAACCTGGCCGGTAAAACTGGGTTGGCTGACACCGCGCGGTGGTGAGCTAATCGCCTATCTCGGACATTACCAACGCCAGCGTCTGGTAGCCGACGGATTGCTGGCGAAAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAACTGGATAACGCGAACGTGACTGACGCGATCCTCAGCAGGGCAGGAGGGTCAATTGCTGACTTTACCGGGCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTTGTGCCTTAAACGTGAGAAACAGGACGAAAGCTGTTCATTAACGCAGGCATTACCATCGGAACTCAAGGTGAGCGCCGACAATGTCTCATTAACCGGTGCGGTAAGCCTCGCATCAATGCTGACGGAGATATTTCTCCTGCAACAAGCACAGGGAATGCCGGAGCCGGGGTGGGGAAGGATCACCGATTCACACCAGTGGAACACCTTGCTAAGTTTGCATAACGCGCAATTTTATTTGCTACAACGCACGCCAGAGGTTGCCCGCAGCCGCGCCACCCCGTTATTAGATTTGATCAAGACAGCGTTGACGCCCCATCCACCGCAAAAACAGGCGTATGGTGTGACATTACCCACTTCAGTGCTGTTTATCGCCGGACACGATACTAATCTGGCAAATCTCGGCGGCGCACTGGAGCTCAACTGGACGCTTCCCGGTCAGCCGGATAACACGCCGCCAGGTGGTGAACTGGTGTTTGAACGCTGGCGTCGGCTAAGCGATAACAGCCAGTGGATTCAGGTTTCGCTGGTCTTCCAGACTTTACAGCAGATGCGTGATAAAACGCCGCTGTCATTAAATACGCCGCCCGGAGAGGTGAAACTGACCCTGGCAGGATGTGAAGAGCGAAATGCGCAGGGCATGTGTTCGTTGGCAGGTTTTACGCAAATCGTGAATGAAGCACGCATACCGGCGTGCAGTTTGTAA", + "dna_sequence_length": 1299, + "functions": [ + "phosphoanhydride phosphorylase" + ], + "id": "CDS_961", + "location": [ + [ + "NC_000913", + 1040617, + "+", + 1299 + ] + ], + "md5": "8dfd9ec01225f0be73b353b0704b7666", + "parent_gene": "", + "protein_md5": "e701190903cc5eb0eef7b8a96ce4f2ce", + "protein_translation": "MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003309" + ], + [ + "gene_synonym", + "ECK0972" + ], + [ + "gene_synonym", + "EcoGene:EG11826" + ], + [ + "gene_synonym", + "GI:16128947" + ], + [ + "gene_synonym", + "GeneID:947409" + ], + [ + "gene_synonym", + "JW0964" + ], + [ + "gene_synonym", + "NP_415501.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38134" + ], + [ + "gene_synonym", + "b0981" + ], + [ + "gene_synonym", + "etk" + ], + [ + "gene_synonym", + "yccC" + ] + ], + "dna_sequence": "ATGACAACTAAAAATATGAATACGCCACCAGGCAGCACTCAGGAAAATGAGATCGATCTGCTTCGTCTGGTCGGCGAGTTATGGGATCACCGTAAGTTTATTATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTCTGGTCCAGGTTGAGCAAAAACAGGGCAACGCCATTCTCAGCGGCCTGAGCGATATGATCCCTAACTCATCGCCCGAGTCTGCACCGGAGATCCAACTGCTGCAATCGCGCATGATTCTCGGTAAAACCATTGCTGAACTGAATCTGCGCGACATAGTTGAGCAGAAGTATTTTCCGATTGTGGGTCGCGGCTGGGCGAGATTAACCAAAGAAAAACCAGGTGAGCTGGCGATCAGCTGGATGCATATTCCACAACTGAATGGTCAGGATCAGCAACTGACACTCACGGTTGGGGAAAACGGCCACTATACACTGGAAGGTGAAGAGTTCACCGTCAATGGTATGGTCGGCCAGCGTCTGGAAAAAGATGGCGTTGCGCTGACTATCGCGGACATTAAGGCCAAACCAGGAACACAGTTTGTCCTGAGCCAGCGTACCGAACTGGAAGCGATTAACGCATTGCAGGAAACCTTTACCGTTAGCGAACGCAGTAAAGAAAGCGGGATGCTGGAACTTACCATGACTGGTGATGATCCCCAGTTGATTACTCGTATTCTGAACAGCATCGCTAACAACTATTTGCAACAGAATATCGCTCGCCAGGCGGCGCAGGATTCACAAAGCCTTGAATTCTTACAGCGCCAGTTACCTGAAGTGCGCAGCGAGCTGGACCAAGCGGAAGAAAAACTCAACGTTTATCGCCAGCAGCGCGATTCGGTTGACCTTAACCTGGAAGCCAAAGCCGTTCTTGAGCAGATTGTGAACGTTGATAATCAACTCAATGAGCTGACCTTCCGCGAGGCAGAGATCTCCCAGCTGTATAAGAAAGATCACCCAACTTATCGTGCGCTGCTGGAAAAACGCCAGACGCTGGAGCAAGAACGCAAACGCCTGAATAAGCGGGTATCGGCAATGCCTTCCACCCAACAGGAAGTGTTGCGTTTAAGTCGTGACGTAGAAGCGGGCCGTGCGGTATATCTGCAATTACTTAACCGCCAGCAGGAGTTGAGTATTTCGAAATCCAGTGCCATTGGTAACGTGCGGATTATCGACCCGGCAGTCACTCAGCCGCAGCCAGTGAAACCGAAAAAAGCGTTGAACGTGGTGCTTGGTTTTATTCTTGGCCTGTTTATTTCTGTGGGTGCCGTGCTGGCGCGTGCGATGTTGCGTCGTGGTGTAGAAGCCCCGGAACAACTGGAAGAGCACGGCATCAGCGTTTATGCCACTATCCCAATGTCCGAGTGGCTGGATAAACGCACCCGTCTGCGTAAGAAAAATTTATTTTCTAATCAGCAGCGCCATCGTACTAAAAATATCCCCTTCCTGGCGGTGGATAACCCGGCGGATTCTGCTGTGGAAGCCGTACGTGCGCTACGAACCAGTCTGCATTTCGCTATGATGGAGACGGAGAATAACATTCTAATGATCACCGGTGCGACGCCAGACAGTGGTAAAACGTTTGTCAGTTCAACTCTGGCAGCGGTGATCGCCCAGTCCGATCAAAAAGTGTTATTTATTGATGCCGACTTACGCCGTGGTTATTCGCATAACCTGTTTACCGTGAGTAATGAACATGGCTTGTCGGAATATCTGGCAGGTAAAGATGAGCTCAACAAAGTGATCCAGCATTTTGGCAAAGGAGGCTTTGATGTGATTACTCGCGGTCAGGTGCCACCTAACCCGTCTGAACTGCTGATGCGCGATCGGATGCGTCAATTACTGGAATGGGCGAACGACCATTACGATCTGGTGATTGTCGATACGCCGCCGATGCTGGCGGTGAGTGATGCCGCGGTCGTGGGGCGTTCTGTTGGCACCAGCCTGCTGGTTGCGCGTTTTGGCTTGAACACCGCCAAAGAGGTGAGTTTGTCAATGCAGCGTCTGGAACAGGCAGGCGTCAATATTAAAGGCGCTATCCTCAATGGTGTGATTAAACGCGCCAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAA", + "dna_sequence_length": 2181, + "functions": [ + "tyrosine-protein kinase, role in O-antigen capsule formation" + ], + "id": "CDS_962", + "location": [ + [ + "NC_000913", + 1044210, + "-", + 2181 + ] + ], + "md5": "e84111fdb6faf86f3618ab04a13d6b96", + "parent_gene": "", + "protein_md5": "26b060829f833842c9fcbf35407fd70f", + "protein_translation": "MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGKTIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGENGHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETFTVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLRRGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE", + "protein_translation_length": 726, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003312" + ], + [ + "gene_synonym", + "ECK0973" + ], + [ + "gene_synonym", + "EcoGene:EG13727" + ], + [ + "gene_synonym", + "GI:90111198" + ], + [ + "gene_synonym", + "GeneID:945236" + ], + [ + "gene_synonym", + "JW5132" + ], + [ + "gene_synonym", + "NP_415502.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ2" + ], + [ + "gene_synonym", + "b0982" + ], + [ + "gene_synonym", + "etp" + ], + [ + "gene_synonym", + "yccY" + ] + ], + "dna_sequence": "ATGGCCCAACTAAAATTTAACTCAATCCTGGTGGTTTGTACCGGCAACATTTGCCGTTCGCCCATTGGCGAGCGCTTGCTGCGTAAACGTCTGCCGGGCGTAAAAGTCAAATCGGCAGGTGTTCATGGTCTGGTAAAACACCCTGCAGATGCGACAGCGGCAGATGTTGCCGCTAATCATGGCGTATCTCTTGAAGGACATGCCGGACGTAAGCTCACTGCTGAGATGGCACGAAATTACGATCTGATTCTGGCAATGGAGTCGGAACATATTGCTCAGGTTACCGCAATTGCTCCCGAGGTCCGCGGGAAGACAATGCTGTTTGGGCAATGGCTGGAACAGAAAGAGATCCCGGATCCCTATCGTAAAAGTCAGGACGCATTTGAACATGTCTACGGTATGTTGGAGCGCGCCAGTCAGGAATGGGCGAAGCGCCTCAGCCGGTAA", + "dna_sequence_length": 447, + "functions": [ + "O-antigen capsule forming protein-tyrosine-phosphatase", + "Etk-P dephosphorylase" + ], + "id": "CDS_963", + "location": [ + [ + "NC_000913", + 1044676, + "-", + 447 + ] + ], + "md5": "6acb3dd8e14c7e2a8f1f9c94c5427521", + "parent_gene": "", + "protein_md5": "e708f2101280a7bb3d02956365052fbb", + "protein_translation": "MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003317" + ], + [ + "gene_synonym", + "ECK0974" + ], + [ + "gene_synonym", + "EcoGene:EG13728" + ], + [ + "gene_synonym", + "GI:16128949" + ], + [ + "gene_synonym", + "GeneID:945586" + ], + [ + "gene_synonym", + "JW0966" + ], + [ + "gene_synonym", + "NP_415503.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A932" + ], + [ + "gene_synonym", + "b0983" + ], + [ + "gene_synonym", + "gfcE" + ], + [ + "gene_synonym", + "yccZ" + ] + ], + "dna_sequence": "ATGAAAAAGAACATTTTTAAGTTTTCGGTACTGACATTGGCTGTTCTGTCTTTGACAGCATGTACCCTTGTTCCTGGTCAGAATTTATCGACCAGTAACAAGGATGTCATTGAACTACCTGACAATCAGTATGACCTGGACAAAATGGTCAATATCTATCCCGTCACGCCAGGATTGATTGATCAGTTGCGCGCCAAACCGATTATGTCGCAGGCTAACCCGGAGCTGGAGCAGCAAATCGCAAACTATGAATATCGTATCGGGATTGGTGATGTGTTGATGGTTACGGTCTGGGATCACCCGGAACTAACCACCCCCGCAGGGCAATACCGTAGCGCCAGTGATACCGGCAACTGGGTTAACGCCGATGGTGCGATTTTCTACCCCTATATTGGTCGCCTGAAAGTGGCCGGGAAAACACTTACCCAGGTACGCAACGAGATTACAGCGCGTCTCGATTCAGTCATTGAAAGCCCGCAAGTCGATGTCAGCGTCGCGGCGTTCCGATCGCAAAAAGCGTACGTCACCGGCGAAGTCAGCAAATCGGGTCAGCAGCCGATTACCAATATTCCTCTGACCATCATGGATGCGATTAACGCCGCGGGCGGTCTGACCGCAGATGCAGACTGGCGCAACGTGGTGCTCACCCAGAATGGCGTAAAGACCAAAGTGAACCTCTATGCGCTGATGCAGCGTGGCGACTTGCGCCAGAACAAACTGCTGCACCCGGGCGATATTTTATTTATTCCGCGCAACGATGATCTGAAAGTCTTCGTGATGGGTGAAGTGGGTAAACAGAGCACGCTGAAAATGGACCGCAGCGGTATGACCCTGGCGGAAGCGCTGGGTAACGCTGAGGGTATGAATCAGGATGTCGCTGATGCGACGGGGATTTTTGTTATTCGTGCAACGCAAAACAAGCAGAATGGCAAAATCGCCAATATTTATCAGCTGAATGCGAAGGACGCATCGGCAATGATACTCGGAACGGAATTCCAGCTTGAACCTTACGACATTGTTTATGTCACTACCGCGCCGCTGGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACCTGACAGAGACTTCACGGTGGATTCAAACATGGCCCAACTAA", + "dna_sequence_length": 1140, + "functions": [ + "putative O-antigen capsule outer membrane auxillary protein export channel" + ], + "id": "CDS_964", + "location": [ + [ + "NC_000913", + 1045803, + "-", + 1140 + ] + ], + "md5": "002488a6838e0a379e2ace921c319781", + "parent_gene": "", + "protein_md5": "d7d8480d41cfc1a2f3db54b71892c0a4", + "protein_translation": "MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003319" + ], + [ + "gene_synonym", + "ECK0975" + ], + [ + "gene_synonym", + "EcoGene:EG13729" + ], + [ + "gene_synonym", + "GI:16128950" + ], + [ + "gene_synonym", + "GeneID:945588" + ], + [ + "gene_synonym", + "JW0967" + ], + [ + "gene_synonym", + "NP_415504.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75882" + ], + [ + "gene_synonym", + "b0984" + ], + [ + "gene_synonym", + "gfcD" + ], + [ + "gene_synonym", + "ymcA" + ] + ], + "dna_sequence": "ATGAAGAAGAATTCTTATCTTTTAAGCTGCCTGGCCATTGCCGTCTCCAGTGCCTGTCATGCTGAAGTATTAACCTACCCGGATCCGCTGGGTTCGTCGCAATCAGACTTTGGCGGCACAGGATTGTTGCAGATGCCAAATGCGCGCATCGCACCGGAAGGTGAATTCAGCGTCAACTACCGGGATAACGATCAATACCGGTTCTACTCCACCTCCGTGGCGCTGTTCCCATGGCTGGAAGGCACCATTCGTTATACGGATGTGCGCACACGCAAATATAGCCAGTGGGAAGATTTCAGCGGCGATCAGTCATACAAAGACAAATCATTCGATTTTAAACTTCGCCTGTGGGAAGAAGGTTACTGGCTACCGCAAGTGGCGTTTGGTAAACGTGATATTGCTGGTACGGGTCTGTTTGACGGTGAGTATCTGGTGGCCAGCAAGCAAGCGGGGCCATTTGATTTCACCCTCGGGATGGCATGGGGCTACGCCGGTAATGCGGGCAATATTACCAACCCGTTTTGCCGGGTGAGCGATAAATATTGTCATCGCGCAGAGTCTCACGATGCGGGCGATATCAGCTTTAGCGATATCTTTCGTGGCCCGGCTTCCATCTTTGGCGGCATTGAGTATCAAACGCCGTGGAATCCCCTGCGTCTGAAACTCGAATACGATGGAAACAATTACCAGAATGATTTCGCTGGCAAACTGCCTCAGGCAAGCCATTTCAACGTCGGCGCAGTTTATCGCGCTGCCAGCTGGGCAGATCTCAACCTGAGTTATGAACGCGGTAACACGTTGATGTTTGGCTTCACGTTACGGACCAATTTCAACGATCTGCGCCCTGCCCTGCGCGATACGCCAAAACCGGCATATCAACCTGCGCCTGAATCTGAAGGATTGCAGTACACCACGGTAGCAAACCAACTTACCGCCCTGAAGTATAACGCGGGCTTTGACGCGCCAGAAATTCAGCTACGCGATAAGACACTGTATATGTCTGGTCAGCAATACAAATACCGTGACTCTCGTGAAGCGGTCGATCGTGCCAACCGGATTCTGGTGAATAACCTGCCGCAAGGCGTTGAGAAGATTAGCGTGACGCAAAAGCGCGAGCATATGGCGATGGTGACTACCGAAACCGACGTAGCCAGCCTGCGCAAACAGCTGGCAGGTACAGCGCCTGGTCAATCAGAGCCACTGCAACAACAACGTGTTGAAGCTGAAGATCTTTCTGCCTTTGGTCGGGGCTACCGTATTCGTGAAGATCGCTTTAGCTACTCTTTCAACCCAACACTTTCACAGTCGCTGGGCGGCCCGGAAGATTTCTATATGTTCCAGCTGGGGCTGATGTCCAGTGCCCGCTACTGGTTTACCGACCACCTGCTGCTTGATGGCGGTATTTTCACCAATATTTACAACAACTACGACAAGTTTAAGTCTTCGCTGTTGCCCGCGGACTCTACCCTGCCCCGCGTGCGCACGCATATCCGTGACTACGTTCGCAATGACGTTTATCTCAACAACTTGCAGGCGAACTATTTTGCTGACTTAGGCAATGGTTTCTATGGCCAGGTGTATGGCGGTTATCTGGAAACGATGTACGCCGGTGTCGGTTCCGAGCTGCTTTATCGCCCGCTAGATGCCTGCTGGGCGCTGGGTGTGGACGTTAACTACGTGAAGCAACGTGACTGGGACAACATGATGCGTTTCACCGATTATTCCACGCCAACAGGTTTCGTGACGGCTTACTGGAACCCGCCGACGCTCAATGGCGTACTGATGAAACTTAGCGTTGGGCAATATCTGGCAAAAGATAAAGGCGCAACGATCGACGTCGCCAAACGCTTTGACAGCGGCGTGGCGGTAGGGGTATGGGCGGCAATCAGTAACGTATCTAAAGATGACTACGGCGAAGGCGGCTTTAGTAAAGGTTTTTATATCTCGATTCCATTCGACTTGATGACCATTGGACCTAACCGCAACCGCGCGGTGGTTTCGTGGACACCATTGACGCGTGATGGTGGACAAATGCTGTCACGCAAATACCAGCTCTATCCAATGACGGCAGAGCGAGAAGTACCGGTTGGACAATAA", + "dna_sequence_length": 2097, + "functions": [ + "putative O-antigen capsule production periplasmic protein" + ], + "id": "CDS_965", + "location": [ + [ + "NC_000913", + 1047945, + "-", + 2097 + ] + ], + "md5": "65cd27bced87066129b6cabce0cdd3fb", + "parent_gene": "", + "protein_md5": "99b0df83fcc4f5ebabeaa7093da7de4c", + "protein_translation": "MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEPLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDACWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ", + "protein_translation_length": 698, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003321" + ], + [ + "gene_synonym", + "ECK0976" + ], + [ + "gene_synonym", + "EcoGene:EG13730" + ], + [ + "gene_synonym", + "GI:16128951" + ], + [ + "gene_synonym", + "GeneID:944978" + ], + [ + "gene_synonym", + "JW0968" + ], + [ + "gene_synonym", + "NP_415505.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75883" + ], + [ + "gene_synonym", + "b0985" + ], + [ + "gene_synonym", + "gfcC" + ], + [ + "gene_synonym", + "ymcB" + ] + ], + "dna_sequence": "ATGAATAAATTACAGTCGTATTTCATTGCCAGCGTACTTTACGTAATGACACCCCATGCCTTTGCGCAAGGAACGGTGACTATTTATCTGCCTGGCGAACAACAGACACTTTCCGTTGGCCCCGTGGAAAATGTTGTCCAGTTGGTGACACAACCGCAACTGCGCGATCGCCTCTGGTGGCCTGGTGCCTTGCTGACCGACTCTGCGGCGAAAGCTAAAGCGCTTAAAGACTACCAACATGTCATGGCACAGCTTGCTTCCTGGGAAGCAGAAGCTGACGACGATGTGGCGGCAACGATTAAATCCGTGCGCCAGCAGTTACTCAATCTCAATATCACTGGTCGCTTACCGGTCAAACTGGACCCTGATTTTGTACGAGTGGATGAGAACAGCAATCCCCCGTTGGTCGGGGACTATACGCTCTATACCGTACAGCGTCCGGTGACTATTACTCTGCTGGGTGCGGTTTCTGGGGCCGGGCAATTGCCCTGGCAGGCAGGCCGTAGCGTTACCGATTATCTGCAAGATCACCCCCGCCTTGCAGGCGCGGACAAGAATAACGTTATGGTGATTACGCCTGAGGGTGAGACTGTCGTCGCCCCTGTTGCCCTGTGGAATAAAAGACATGTGGAACCACCGCCTGGCAGCCAGCTTTGGTTGGGCTTTTCTGCGCATGTACTGCCCGAAAAATATGCTGATTTAAATGACCAGATTGTGTCTGTTTTAACGCAACGTGTTCCTGACTGA", + "dna_sequence_length": 747, + "functions": [ + "putative O-antigen capsule production periplasmic protein" + ], + "id": "CDS_966", + "location": [ + [ + "NC_000913", + 1048691, + "-", + 747 + ] + ], + "md5": "04e0f654a0f1577791f9614ec40faaa7", + "parent_gene": "", + "protein_md5": "95c1e9e66d0834c4960ed6e96cc07b99", + "protein_translation": "MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003323" + ], + [ + "gene_synonym", + "ECK0977" + ], + [ + "gene_synonym", + "EcoGene:EG13731" + ], + [ + "gene_synonym", + "GI:16128952" + ], + [ + "gene_synonym", + "GeneID:949118" + ], + [ + "gene_synonym", + "JW0969" + ], + [ + "gene_synonym", + "NP_415506.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75884" + ], + [ + "gene_synonym", + "b0986" + ], + [ + "gene_synonym", + "gfcB" + ], + [ + "gene_synonym", + "ymcC" + ] + ], + "dna_sequence": "GTGCGCCCTCTTATTTTATCGATTTTCGCACTATTTCTTGCGGGATGTACGCACAGCCAGCAAAGTATGGTCGATACATTTCGCGCCAGCCTTTTCGATAATCAGGATATCACCGTAGCGGATCAGCAGATCCAGGCGTTGCCTTATTCCACTATGTATTTACGCCTTAATGAAGGGCAACGAATCTTTGTGGTACTGGGATATATAGAACAAGAACAAAGCAAATGGTTATCCCAGGATAACGCCATGCTGGTTACCCACAATGGACGTCTTTTAAAAACCGTCAAACTTAATAATAATCTGCTGGAAGTGACAAATTCCGGGCAGGACCCTCTGCGTAACGCGCTGGCAATAAAAGATGGCAGCCGCTGGACGCGCGATATTCTCTGGAGTGAAGACAACCATTTTCGCTCTGCGACCCTGAGTTCTACTTTTTCCTTTGCTGGATTAGAGACGCTGAATATTGCGGGTCGCAATGTGCTGTGTAATGTCTGGCAGGAAGAGGTGACTTCCACGCGGCCAGAAAAACAGTGGCAAAACACATTCTGGGTCGATTCGGCTACTGGCCAGGTTCGTCAAAGTCGGCAAATGTTAGGCGCAGGGGTTATTCCCGTAGAAATGACGTTTCTTAAACCCGCACCATGA", + "dna_sequence_length": 645, + "functions": [ + "O-antigen capsule production lipoprotein" + ], + "id": "CDS_967", + "location": [ + [ + "NC_000913", + 1049332, + "-", + 645 + ] + ], + "md5": "19ec9bbee64b0c256cc4364eaf568a2b", + "parent_gene": "", + "protein_md5": "a5163e6db4be9eda645462952e9c4ece", + "protein_translation": "MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP", + "protein_translation_length": 214, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003325" + ], + [ + "gene_synonym", + "ECK0978" + ], + [ + "gene_synonym", + "EcoGene:EG13732" + ], + [ + "gene_synonym", + "GI:90111199" + ], + [ + "gene_synonym", + "GeneID:945029" + ], + [ + "gene_synonym", + "JW5133" + ], + [ + "gene_synonym", + "NP_415507.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75885" + ], + [ + "gene_synonym", + "b0987" + ], + [ + "gene_synonym", + "gfcA" + ], + [ + "gene_synonym", + "ymcD" + ] + ], + "dna_sequence": "ATGAAACACAAGCTTTCTGCAATCCTTATGGCCTTCATGTTGACGACGCCAGCTGCGTTTGCTGCCCCTGAAGCAACAAACGGGACCGAGGCAACGACGGGTACTACTGGCACCACAACGACCACTACCGGCGCAACCACGACTGCTACTACCACTGGTGGCGTGGCTGCTGGCGCTGTCGGCACGGCGACAGTTGTCGGTGTGGCAACGGCTGTTGGTGTGGCGACGTTGGCAGTTGTTGCAGCAAATGACAGTGGCGATGGCGGTTCTCATAACACCTCAACCACCACGTCCACTACACGCTAA", + "dna_sequence_length": 306, + "functions": [ + "O-antigen capsule production threonine-rich inner membrane protein" + ], + "id": "CDS_968", + "location": [ + [ + "NC_000913", + 1049744, + "-", + 306 + ] + ], + "md5": "4c5eb87f858fb297096e9872f6b3aa35", + "parent_gene": "", + "protein_md5": "d7fde3af2a8fc202a7cfcda435aaaac2", + "protein_translation": "MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285037" + ], + [ + "gene_synonym", + "ECK4531" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:94541103" + ], + [ + "gene_synonym", + "GeneID:1450250" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF10" + ], + [ + "gene_synonym", + "YP_588445.1" + ], + [ + "gene_synonym", + "b4516" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_969", + "location": [ + [ + "NC_000913", + 1049833, + "+", + 276 + ] + ], + "md5": "0eedacb89276f0524ee56c8eb2e9adbe", + "parent_gene": "", + "protein_md5": "27f7da6e06bb874058543e01b3979d8b", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003338" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16128954" + ], + [ + "gene_synonym", + "GeneID:945009" + ], + [ + "gene_synonym", + "NP_415508.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P57998" + ], + [ + "gene_synonym", + "b0988" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_970", + "location": [ + [ + "NC_000913", + 1050027, + "+", + 504 + ] + ], + "md5": "875ee50b5688ca8bd28d12a1e3d7ade2", + "parent_gene": "", + "protein_md5": "ed8b0f4c937afa9f0516ea91ced6b264", + "protein_translation": "MPGNSPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERYNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003341" + ], + [ + "gene_synonym", + "ECK0979" + ], + [ + "gene_synonym", + "EcoGene:EG14281" + ], + [ + "gene_synonym", + "GI:16128955" + ], + [ + "gene_synonym", + "GeneID:945590" + ], + [ + "gene_synonym", + "JW5134" + ], + [ + "gene_synonym", + "NP_415509.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A982" + ], + [ + "gene_synonym", + "b0989" + ], + [ + "gene_synonym", + "cspH" + ], + [ + "gene_synonym", + "cspK" + ] + ], + "dna_sequence": "TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGATCGCAAAAGCGGCAAAGGATTCATTATCCCCTCCGACGGTCGTAAAGAAGTTCAGGTCCATATTTCCGCATTCACTCCCCGCGACGCAGAAGTGCTTATACCAGGATTACGTGTGGAATTTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAA", + "dna_sequence_length": 213, + "functions": [ + "stress protein, member of the CspA-family" + ], + "id": "CDS_971", + "location": [ + [ + "NC_000913", + 1051175, + "-", + 213 + ] + ], + "md5": "cd568c73b77a15f7544ce5305a9afaa3", + "parent_gene": "", + "protein_md5": "da3a6db81019f324fe1a4adec9e8854f", + "protein_translation": "MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLRGPTAANVYLS", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003346" + ], + [ + "gene_synonym", + "ECK0980" + ], + [ + "gene_synonym", + "EcoGene:EG14243" + ], + [ + "gene_synonym", + "GI:16128956" + ], + [ + "gene_synonym", + "GeneID:945591" + ], + [ + "gene_synonym", + "JW0974" + ], + [ + "gene_synonym", + "NP_415510.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A978" + ], + [ + "gene_synonym", + "b0990" + ], + [ + "gene_synonym", + "cspG" + ], + [ + "gene_synonym", + "cspI" + ] + ], + "dna_sequence": "ATGTCTAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCAGATAAAGGTTTTGGCTTTATCACTCCTGATGATGGCAGCAAAGACGTTTTCGTCCATTTCACCGCCATCCAGAGCAATGAATTCCGCACGCTGAACGAAAATCAGAAAGTTGAATTTTCTATTGAGCAGGGGCAACGTGGCCCCGCGGCAGCGAACGTTGTTACGCTCTAA", + "dna_sequence_length": 213, + "functions": [ + "cold shock protein homolog, cold-inducible" + ], + "id": "CDS_972", + "location": [ + [ + "NC_000913", + 1051461, + "+", + 213 + ] + ], + "md5": "6c2afaa00f9c7b2412055784817f5377", + "parent_gene": "", + "protein_md5": "662e2c654a4d1fc5062f4e29d8747029", + "protein_translation": "MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003349" + ], + [ + "gene_synonym", + "ECK0981" + ], + [ + "gene_synonym", + "EcoGene:EG13232" + ], + [ + "gene_synonym", + "GI:16128957" + ], + [ + "gene_synonym", + "GeneID:946951" + ], + [ + "gene_synonym", + "JW0975" + ], + [ + "gene_synonym", + "NP_415511.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAA5" + ], + [ + "gene_synonym", + "b0991" + ], + [ + "gene_synonym", + "sfa" + ], + [ + "gene_synonym", + "ymcE" + ] + ], + "dna_sequence": "ATGCGCCGCTGGATTTCACAAAATAATATCAGGCTCCCTCGTGGAGCCTTTTTTATATCTGCCTTATTTTTCTTCAACGCTGTATGTATAGTAAGCGATAACCTGTTGATTATTGAATCTTTCGGGGAGATGGCTTATAACATTTCTTACCTGACCAGGGTACCGGGAACCAACACCTTACTGGCGTGTTGCTGTCTTTTAAGACCAGAAGAGGTTAACAGTGAATATTGA", + "dna_sequence_length": 231, + "functions": [ + "cold shock gene" + ], + "id": "CDS_973", + "location": [ + [ + "NC_000913", + 1051847, + "+", + 231 + ] + ], + "md5": "994b7cf916e78376c9d5a4f66a5da99f", + "parent_gene": "", + "protein_md5": "12d246d8816a6232049dfe3015021a51", + "protein_translation": "MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLACCCLLRPEEVNSEY", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285038" + ], + [ + "gene_synonym", + "ECK0982" + ], + [ + "gene_synonym", + "EcoGene:EG13233" + ], + [ + "gene_synonym", + "GI:94541104" + ], + [ + "gene_synonym", + "GeneID:1450249" + ], + [ + "gene_synonym", + "JW0976" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC92" + ], + [ + "gene_synonym", + "YP_588446.1" + ], + [ + "gene_synonym", + "b4517" + ], + [ + "gene_synonym", + "gnsA" + ], + [ + "gene_synonym", + "sfa" + ], + [ + "gene_synonym", + "yccL" + ] + ], + "dna_sequence": "GTGAATATTGAAGAGTTAAAAAAACAAGCCGAAACGGAAATCGCCGACTTTATCGCGCAAAAAATCGCCGAGCTGAACAAGAATACAGGGAAAGAAGTCTCTGAAATTCGCTTCACCGCACGAGAAAAAATGACCGGGCTTGAAAGTTATGATGTCAAAATCAAAATAATGTGA", + "dna_sequence_length": 174, + "functions": [ + "putative phosphatidylethanolamine synthesis regulator" + ], + "id": "CDS_974", + "location": [ + [ + "NC_000913", + 1052067, + "+", + 174 + ] + ], + "md5": "958de10bdf5cb3db828d251027d65f9b", + "parent_gene": "", + "protein_md5": "7dc071c8c8d442a9f02c931831cc7b7e", + "protein_translation": "MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003351" + ], + [ + "gene_synonym", + "ECK0983" + ], + [ + "gene_synonym", + "EcoGene:EG13234" + ], + [ + "gene_synonym", + "GI:16128958" + ], + [ + "gene_synonym", + "GeneID:946295" + ], + [ + "gene_synonym", + "JW0977" + ], + [ + "gene_synonym", + "NP_415512.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52636" + ], + [ + "gene_synonym", + "b0992" + ], + [ + "gene_synonym", + "yccM" + ] + ], + "dna_sequence": "ATGGCAGAGAATAAAAGAACCCGCTGGCAGCGGCGGCCAGGCACGACGGGCGGCAAATTACCGTGGAATGACTGGCGTAATGCCACGACCTGGCGTAAAGCGACGCAATTATTACTGTTGGCAATGAATATTTATATTGCCATCACGTTCTGGTATTGGGTGCGCTATTACGAAACGGCAAGTAGCACGACATTTGTCGCCAGACCGGGAGGTATCGAAGGCTGGCTACCGATTGCCGGGCTGATGAATCTGAAATATAGCCTTGTAACAGGTCAGTTACCGTCCGTCCACGCCGCCGCGATGCTGTTATTGGTCGCTTTTATCGTCATCAGTCTATTACTCAAAAAGGCCTTTTGCTCATGGTTATGCCCGGTTGGTACGCTTTCTGAATTAATCGGCGATCTCGGTAACAAACTGTTTGGTCGGCAATGTGTCCTTCCCCGCTGGCTGGATATTCCTCTGCGCGGCGTGAAGTATTTGCTGTTGAGTTTTTTTATCTATATCGCGTTATTGATGCCCGCTCAGGCGATTCACTATTTTATGTTGTCGCCCTACAGCGTGGTGATGGACGTTAAAATGCTCGATTTCTTTCGTCATATGGGGACCGCGACATTAATCAGCGTGACCGTTTTGCTGATTGCCAGCCTGTTTATTCGCCATGCCTGGTGTCGTTATCTTTGCCCATATGGCGCGCTGATGGGCGTGGTTTCGCTATTGTCGCCGTTTAAGATTCGTCGCAATGCCGAAAGTTGTATCGACTGTGGCAAATGCGCAAAAAATTGCCCATCACGGATCCCGGTCGATAAATTAATTCAGGTACGAACAGTGGAATGTACCGGCTGTATGACTTGCGTAGAGTCATGTCCGGTAGCCTCAACATTGACCTTTTCACTGCAAAAACCTGCGGCAAATAAAAAAGCCTTTGCGTTGTCTGGCTGGTTAATGACGCTACTGGTTCTGGGGATTATGTTTGCGGTGATTGGTTACGCAATGTATGCGGGAGTATGGCAAAGCCCGGTGCCGGAGGAATTGTACCGACGCTTAATTCCACAAGCGCCAATGATTGGTCACTAA", + "dna_sequence_length": 1074, + "functions": [ + "putative 4Fe-4S membrane protein" + ], + "id": "CDS_975", + "location": [ + [ + "NC_000913", + 1053362, + "-", + 1074 + ] + ], + "md5": "999d70d8a1a9c0b40ad035a5c3932e1c", + "parent_gene": "", + "protein_md5": "1fb31875f5ececcbf19d89e4988bd073", + "protein_translation": "MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLAMNIYIAITFWYWVRYYETASSTTFVARPGGIEGWLPIAGLMNLKYSLVTGQLPSVHAAAMLLLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYLLLSFFIYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFIRHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTVECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAGVWQSPVPEELYRRLIPQAPMIGH", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003354" + ], + [ + "gene_synonym", + "ECK0984" + ], + [ + "gene_synonym", + "EcoGene:EG12617" + ], + [ + "gene_synonym", + "GI:90111200" + ], + [ + "gene_synonym", + "GeneID:945595" + ], + [ + "gene_synonym", + "JW5135" + ], + [ + "gene_synonym", + "NP_415513.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39453" + ], + [ + "gene_synonym", + "b0993" + ], + [ + "gene_synonym", + "torS" + ], + [ + "gene_synonym", + "yccI" + ] + ], + "dna_sequence": "GTGAATTTAACCCTGACCCGAAGACTCTGGATGGGCTTTGCCCTGATGGCGCTGTTAACCCTGACCAGTACCCTGGTGGGATGGTACAACCTGCGCTTTATCAGCCAGGTGGAAAAAGACAACACTCAGGCATTGATTCCTACCATGAATATGGCGCGCCAGTTGAGCGAAGCCAGCGCCTGGGAACTTTTCGCCGCGCAGAACCTGACCAGTGCCGATAACGAAAAGATGTGGCAGGCGCAGGGGCGAATGCTCACCGCACAAAGCCTGAAGATTAATGCGTTGCTGCAAGCGTTACGGGAACAAGGTTTTGATACCACCGCTATTGAACAACAGGAGCAGGAGATCTCCCGTTCGTTACGTCAGCAAGGGGAACTGGTGGGGCAGCGTTTGCAACTGCGCCAGCAACAACAGCAACTCAGTCAGCAGATAGTCGCTGCCGCCGATGAGATCGCACGCCTGGCGCAAGGTCAGGCGAATAATGCGACAACTTCCGCTGGAGCGACCCAGGCCGGGATTTACGATTTGATCGAACAAGATCAGCGTCAGGCTGCTGAAAGTGCACTCGATCGGCTGATTGATATCGATCTTGAGTATGTTAACCAGATGAATGAACTGCGCCTTAGCGCTCTGCGGGTGCAGCAAATGGTGATGAATCTGGGGCTGGAGCAGATCCAGAAAAATGCACCAACGCTGGAAAAGCAGCTCAATAATGCGGTGAAAATTCTGCAACGTCGGCAAATACGCATTGAAGATCCGGGTGTTCGTGCGCAGGTCGCAACAACGTTAACTACCGTTAGCCAATATAGCGATTTGCTGGCGCTGTATCAGCAGGACAGTGAAATCAGCAATCACCTACAAACTCTCGCACAAAATAACATCGCCCAGTTCGCGCAGTTTAGTAGCGAAGTCAGTCAGCTGGTCGACACCATTGAGCTGCGTAATCAGCACGGACTGGCGCATCTGGAAAAAGCGAGTGCACGCGGGCAATACAGCCTGTTATTGCTGGGGATGGTTTCACTTTGCGCACTGATTCTGATCCTCTGGCGCGTGGTTTATCGCTCAGTCACGCGTCCACTTGCCGAACAAACGCAGGCGCTGCAACGGCTGCTGGACGGTGATATTGACTCCCCTTTCCCGGAAACCGCTGGCGTACGGGAGCTGGATACCATCGGGCGGCTGATGGATGCGTTTCGCAGCAATGTTCATGCACTGAATCGCCACCGCGAACAGCTGGCGGCGCAGGTCAAAGCGCGTACAGCTGAATTGCAGGAACTGGTGATAGAACACCGACAGGCACGGGCGGAAGCAGAAAAAGCCAGCCAGGCAAAATCGGCGTTTCTGGCGGCGATGAGCCATGAGATCCGCACACCGCTGTACGGTATTCTCGGCACTGCTCAACTGCTGGCAGATAACCCCGCACTTAACGCCCAGCGTGATGATTTGCGGGCAATTACTGACTCTGGTGAATCGTTGCTGACCATCCTCAACGATATTCTCGATTATTCCGCTATCGAAGCAGGTGGCAAGAATGTTTCGGTCAGCGATGAGCCCTTTGAACCGCGCCCGCTGCTGGAAAGTACCCTGCAATTAATGAGCGGACGGGTGAAAGGTCGCCCGATTCGCCTGGCAACGGCAATTGCCGATGATATGCCGTGCGCGTTAATGGGCGATCCACGACGTATTCGTCAGGTTATAACCAACCTGTTGAGCAACGCCCTGCGTTTTACTGACGAAGGGTACATTATCCTGCGTAGTCGCACTGATGGCGAGCAATGGCTGGTCGAAGTGGAAGACAGCGGCTGCGGTATTGATCCCGCGAAACTGGCAGAAATCTTCCAGCCATTTGTGCAGGTAAGCGGCAAACGCGGCGGCACCGGGCTGGGACTGACTATCAGTAGCCGTCTGGCCCAGGCGATGGGCGGCGAACTGAGCGCCACCAGCACGCCGGAGGTTGGAAGCTGTTTTTGTTTACGCTTGCCGTTACGTGTTGCCACGGCACCCGTGCCAAAAACAGTCAATCAGGCGGTGCGTCTTGACGGTTTACGTTTGCTGTTAATTGAAGATAACCCGCTAACCCAGCGAATTACCATTGAGATGCTGAAAACCAGTGGTGCGCAGATTGTTGCTGTTGGCAATGCCGCGCAGGCTTTAGAGACACTGCAAAATAGCGAACCGTTTGCTGCCGCACTGGTGGATTTTGATCTGCCGGATATCGACGGCATTACGCTTGCCCGACAACTGGCACAGCAATATCCGTCGCTGGTTTTGATTGGCTTTAGCGCCCATGTCATTGACGAAACGCTGCGCCAGCGTACCAGTTCATTATTCCGCGGGATTATCCCTAAACCGGTGCCGCGTGAAGTGCTCGGTCAGTTACTGGCGCACTATCTCCAACTGCAAGTCAATAATGATCAATCGCTGGATGTATCGCAACTCAATGAAGATGCTCAGTTAATGGGGACGGAGAAGATCCACGAATGGCTGGTATTATTTACACAACATGCCCTGCCGCTTCTCGATGAAATCGACATTGCCCGCGCCAGTCAGGATAGCGAGAAAATAAAGCGTGCCGCGCATCAGCTAAAAAGCAGTTGCTCGAGTCTGGGAATGCATATCGCCAGCCAGCTATGCGCACAACTGGAGCAGCAGCCATTATCTGCCCCCCTTCCACACGAAGAAATTACACGCAGTGTTGCCGCTCTGGAAGCATGGTTGCATAAGAAAGACCTGAACGCGATTTGA", + "dna_sequence_length": 2745, + "functions": [ + "hybrid sensory histidine kinase in two-component regulatory system with TorR" + ], + "id": "CDS_976", + "location": [ + [ + "NC_000913", + 1056178, + "-", + 2745 + ] + ], + "md5": "1a316ca3ca73c23a945bfeb24fd1ed6e", + "parent_gene": "", + "protein_md5": "f2976e49fa4be74737c8204bd3cfc0f6", + "protein_translation": "MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLLLLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIGRLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDIDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIKRAAHQLKSSCSSLGMHIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI", + "protein_translation_length": 914, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003360" + ], + [ + "gene_synonym", + "ECK0985" + ], + [ + "gene_synonym", + "EcoGene:EG12616" + ], + [ + "gene_synonym", + "GI:16128960" + ], + [ + "gene_synonym", + "GeneID:946289" + ], + [ + "gene_synonym", + "JW0979" + ], + [ + "gene_synonym", + "NP_415514.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38683" + ], + [ + "gene_synonym", + "b0994" + ], + [ + "gene_synonym", + "torT" + ], + [ + "gene_synonym", + "yccH" + ] + ], + "dna_sequence": "ATGCGCGTACTGCTATTTTTACTTCTTTCCCTTTTCATGTTGCCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGATGCGCAGCATTTCACGGTGCAAGCCTCTACGCCGCTTAAAGCCAAACGCGCATGGAAACTGTGCGCGCTTTATCCCAGCCTGAAAGATTCATATTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTGGAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATTTTGCTCGGTAGTAGCACGACCTCATTTCCCGACCTGCAAAAGCAGGTAGCAAGTCTGCCGGTGATCGAACTGGTAAATGCTATTGATGCTCCCCAGGTGAAAAGCCGCGTTGGTGTGCCCTGGTTTCAGATGGGCTATCAACCGGGGCGATATCTGGTGCAATGGGCGCACGGTAAACCACTGAATGTGCTGTTGATGCCCGGACCCGATAACGCCGGGGGCAGTAAGGAGATGGTCGAGGGTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCGGTTGAGCAGGCCATCAGGCAATTACAGGGGCAATCGGTTTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGTGAACATATTCGCCGCTCGCTGTCACCAGGGGGATTTCGTCCGGTCTATTTTTATCAGCACACATCAGCGGCTAAGAAATAA", + "dna_sequence_length": 1029, + "functions": [ + "periplasmic sensory protein associated with the TorRS two-component regulatory system" + ], + "id": "CDS_977", + "location": [ + [ + "NC_000913", + 1056261, + "+", + 1029 + ] + ], + "md5": "f9dd2c081550ce04efed0a4e5baaa347", + "parent_gene": "", + "protein_md5": "bfd95b6f6e687e24292a2ae6d78e9566", + "protein_translation": "MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK", + "protein_translation_length": 342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003362" + ], + [ + "gene_synonym", + "ECK0986" + ], + [ + "gene_synonym", + "EcoGene:EG12615" + ], + [ + "gene_synonym", + "GI:16128961" + ], + [ + "gene_synonym", + "GeneID:946182" + ], + [ + "gene_synonym", + "JW0980" + ], + [ + "gene_synonym", + "NP_415515.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38684" + ], + [ + "gene_synonym", + "b0995" + ], + [ + "gene_synonym", + "torR" + ] + ], + "dna_sequence": "ATGCCACATCACATTGTTATTGTTGAAGATGAGCCGGTTACCCAGGCGCGATTACAATCCTACTTCACTCAGGAGGGGTATACCGTTTCCGTTACGGCGAGCGGTGCTGGGCTACGGGAAATTATGCAGAATCAGTCGGTAGATTTAATTCTGCTGGATATCAACTTACCCGATGAAAATGGCCTGATGTTAACCCGCGCCCTGCGAGAACGCTCAACGGTGGGGATTATTCTGGTTACCGGACGCAGCGATCGGATTGACCGTATTGTTGGGCTGGAAATGGGCGCAGACGATTACGTCACCAAACCGCTGGAACTGCGCGAACTGGTAGTACGGGTGAAAAATCTGCTCTGGCGAATCGACCTCGCGCGACAAGCTCAACCGCACACTCAGGACAACTGCTATCGCTTTGCCGGTTATTGCCTGAATGTGTCGCGCCATACGCTGGAGCGGGATGGCGAGCCGATTAAACTGACCCGCGCAGAGTATGAAATGTTGGTGGCATTTGTGACGAATCCGGGCGAAATTCTCAGCCGTGAACGTCTGCTACGTATGCTTTCTGCGCGTCGGGTGGAAAACCCTGACCTGCGCACCGTCGATGTGTTAATTCGTCGTTTACGTCATAAACTCAGCGCGGATTTACTGGTGACGCAACATGGTGAAGGTTATTTCTTAGCCGCTGATGTGTGCTGA", + "dna_sequence_length": 693, + "functions": [ + "response regulator in two-component regulatory system with TorS" + ], + "id": "CDS_978", + "location": [ + [ + "NC_000913", + 1057954, + "-", + 693 + ] + ], + "md5": "81ff2e9e354e385ee29d50320e2e3074", + "parent_gene": "", + "protein_md5": "05e09a272b965ca400145d9008ce4b45", + "protein_translation": "MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003370" + ], + [ + "gene_synonym", + "ECK0987" + ], + [ + "gene_synonym", + "EcoGene:EG11815" + ], + [ + "gene_synonym", + "GI:16128962" + ], + [ + "gene_synonym", + "GeneID:946252" + ], + [ + "gene_synonym", + "JW0981" + ], + [ + "gene_synonym", + "NP_415516.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33226" + ], + [ + "gene_synonym", + "b0996" + ], + [ + "gene_synonym", + "torC" + ] + ], + "dna_sequence": "ATGCGGAAACTCTGGAACGCGCTACGCCGACCCAGTGCTCGTTGGTCGGTACTGGCGCTGGTCGCAATTGGGATTGTGATTGGCATTGCGCTGATTGTATTGCCACACGTTGGGATCAAAGTCACCAGCACAACCGAATTTTGTGTCAGTTGCCACAGTATGCAACCGGTGTATGAAGAATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAACGCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCACGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCTGTACTCTATTGATATTAAGCCAATTTATGCGGCGAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGTGCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATGAAGAAAGGCGACATGGTGAACGATATCAAACCGATCTGGGCTTATGCGGATTCGTTGTACAACGGCACCTGTAACCAGTGCCACGGCGCACCGGAAATCGCCCACTTTGACGCTAACGGTTGGATCGGCACGCTCAACGGCATGATTGGCTTTACCAGTCTCGATAAACGTGAAGAACGCACCTTGTTGAAATATCTGCAAATGAATGCGTCTGACACCGCAGGTAAGGCTCACGGCGATAAGAAGGAAGAAAAATAA", + "dna_sequence_length": 1173, + "functions": [ + "trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit" + ], + "id": "CDS_979", + "location": [ + [ + "NC_000913", + 1058084, + "+", + 1173 + ] + ], + "md5": "bea89f53fa9a7da654be78df86265f73", + "parent_gene": "", + "protein_md5": "0d0916b0b0f67c050f52508bae942707", + "protein_translation": "MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK", + "protein_translation_length": 390, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003372" + ], + [ + "gene_synonym", + "ECK0988" + ], + [ + "gene_synonym", + "EcoGene:EG11814" + ], + [ + "gene_synonym", + "GI:16128963" + ], + [ + "gene_synonym", + "GeneID:946267" + ], + [ + "gene_synonym", + "JW0982" + ], + [ + "gene_synonym", + "NP_415517.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33225" + ], + [ + "gene_synonym", + "b0997" + ], + [ + "gene_synonym", + "torA" + ] + ], + "dna_sequence": "ATGAACAATAACGATCTCTTTCAGGCATCACGTCGGCGTTTTCTGGCACAACTCGGCGGCTTAACCGTCGCCGGGATGCTGGGGCCGTCATTGTTAACGCCGCGACGTGCGACTGCGGCGCAAGCGGCGACTGACGCTGTCATCTCGAAAGAGGGCATTCTTACCGGGTCGCACTGGGGGGCTATCCGCGCGACGGTGAAGGATGGTCGCTTTGTGGCGGCAAAACCGTTCGAACTGGATAAATATCCGTCGAAAATGATTGCCGGATTGCCGGATCACGTACACAACGCGGCGCGTATTCGTTATCCGATGGTACGCGTGGACTGGCTGCGTAAGCGCCATCTCAGCGATACCTCCCAGCGCGGTGATAACCGTTTTGTGCGCGTGAGCTGGGATGAAGCCCTCGACATGTTCTATGAAGAACTGGAACGCGTGCAGAAAACTCACGGGCCGAGTGCCTTGCTGACCGCCAGTGGTTGGCAATCGACGGGGATGTTCCATAACGCTTCGGGGATGCTGGCGAAAGCTATTGCCTTGCATGGTAATAGCGTTGGTACGGGCGGAGATTACTCTACCGGTGCTGCGCAGGTGATCCTGCCGCGCGTAGTCGGTTCGATGGAAGTGTATGAACAGCAAACCTCCTGGCCGCTGGTATTGCAGAACAGCAAAACCATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGATCACGATGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCATGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCTGTACAGTGAAAACCTGTACGACAAAAACTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTGCTGGCTGGTGCGTGCAGCGTATGCAGCACGGTGAACAGTGGGCGTGGATGATTGTGGTTCTGGCGGCGATGCTGGGGCAAATTGGCCTGCCAGGTGGTGGTTTTGGTTTTGGCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATTCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGAACCGGGGAAAGTGATCAACTGGAACGGTAAATCGGTAAAACTGCCGCCGCTGAAAATGTGTATTTTTGCCGGAACTAACCCATTCCATCGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAGATAACCAGTGGACCTCAACCTGCCGCTTTGCCGATATCGTACTGCCTGCGACCACGCAGTTTGAGCGTAACGATCTCGACCAGTACGGCAATCACTCCAACCGTGGCATTATCGCCATGAAACAGGTGGTGCCGCCGCAGTTCGAGGCGCGCAACGACTTCGATATTTTCCGCGAGCTGTGCCGTCGCTTTAATCGCGAAGAAGCCTTTACCGAAGGGCTGGACGAAATGGGCTGGCTGAAACGCATCTGGCAGGAAGGTGTACAGCAAGGCAAAGGACGCGGCGTTCATCTGCCAGCGTTTGATGACTTCTGGAATAACAAAGAGTACGTCGAGTTTGACCATCCGCAGATGTTTGTTCGCCACCAGGCATTCCGCGAAGATCCGGATCTCGAACCGCTGGGCACGCCGAGTGGCCTGATTGAGATCTACTCGAAAACTATCGCCGATATGAACTACGACGATTGTCAGGGGCATCCGATGTGGTTTGAGAAAATCGAACGCTCCCACGGTGGGCCTGGCTCGCAAAAGTATCCGTTGCATCTGCAATCTGTGCATCCGGATTTCCGACTTCACTCGCAGTTATGTGAGTCGGAAACGCTGCGTCAGCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGA", + "dna_sequence_length": 2547, + "functions": [ + "trimethylamine N-oxide (TMAO) reductase I, catalytic subunit" + ], + "id": "CDS_980", + "location": [ + [ + "NC_000913", + 1059256, + "+", + 2547 + ] + ], + "md5": "00a6bd46f02e3f7398fde19a5f47402a", + "parent_gene": "", + "protein_md5": "f905cba6c3d943d8565f11683fa0701a", + "protein_translation": "MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS", + "protein_translation_length": 848, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003374" + ], + [ + "gene_synonym", + "ECK0989" + ], + [ + "gene_synonym", + "EcoGene:EG12195" + ], + [ + "gene_synonym", + "GI:16128964" + ], + [ + "gene_synonym", + "GeneID:945625" + ], + [ + "gene_synonym", + "JW0983" + ], + [ + "gene_synonym", + "NP_415518.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36662" + ], + [ + "gene_synonym", + "b0998" + ], + [ + "gene_synonym", + "torD" + ] + ], + "dna_sequence": "ATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAA", + "dna_sequence_length": 600, + "functions": [ + "TorA-maturation chaperone" + ], + "id": "CDS_981", + "location": [ + [ + "NC_000913", + 1061799, + "+", + 600 + ] + ], + "md5": "0d28aeefd873b52a08f2aad87c369810", + "parent_gene": "", + "protein_md5": "cc98e938aca4e118b6263dd13408b1c6", + "protein_translation": "MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003377" + ], + [ + "gene_synonym", + "ECK0990" + ], + [ + "gene_synonym", + "EcoGene:EG12194" + ], + [ + "gene_synonym", + "GI:16128965" + ], + [ + "gene_synonym", + "GeneID:945597" + ], + [ + "gene_synonym", + "JW0984" + ], + [ + "gene_synonym", + "NP_415519.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63264" + ], + [ + "gene_synonym", + "b0999" + ], + [ + "gene_synonym", + "cbpM" + ], + [ + "gene_synonym", + "yccD" + ] + ], + "dna_sequence": "ATGGCTAATGTTACGGTGACTTTTACTATTACCGAATTTTGCCTGCATACCGGCATCTCTGAAGAGGAGTTGAATGAAATTGTCGGTTTGGGGGTGGTTGAACCGCGTGAGATCCAGGAAACAACCTGGGTATTTGACGACCATGCCGCCATTGTGGTGCAACGCGCGGTACGCCTGCGTCATGAACTGGCTCTGGACTGGCCGGGGATCGCGGTGGCGCTGACGTTAATGGATGATATTGCGCACCTGAAGCAGGAAAACCGCCTGCTGCGCCAGCGGCTTTCCCGGTTTGTAGCTCATCCGTGA", + "dna_sequence_length": 306, + "functions": [ + "modulator of CbpA co-chaperone" + ], + "id": "CDS_982", + "location": [ + [ + "NC_000913", + 1062855, + "-", + 306 + ] + ], + "md5": "9df846b8626302236ae2845b7b1ffca6", + "parent_gene": "", + "protein_md5": "ea9c872e77944385518df5f5ae7feaab", + "protein_translation": "MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003379" + ], + [ + "gene_synonym", + "ECK0991" + ], + [ + "gene_synonym", + "EcoGene:EG12193" + ], + [ + "gene_synonym", + "GI:16128966" + ], + [ + "gene_synonym", + "GeneID:947572" + ], + [ + "gene_synonym", + "JW0985" + ], + [ + "gene_synonym", + "NP_415520.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36659" + ], + [ + "gene_synonym", + "b1000" + ], + [ + "gene_synonym", + "cbpA" + ] + ], + "dna_sequence": "ATGGAATTAAAGGATTATTACGCCATCATGGGCGTGAAACCGACGGACGATCTCAAGACAATCAAGACCGCCTATCGTCGACTTGCCCGCAAATACCATCCTGATGTCAGCAAAGAACCGGATGCCGAAGCCCGCTTCAAAGAGGTCGCTGAAGCCTGGGAAGTGTTAAGTGATGAACAACGTCGCGCTGAGTATGATCAGATGTGGCAACATCGCAACGATCCGCAATTTAACCGTCAGTTCCACCATGGCGACGGTCAGAGTTTTAACGCCGAAGATTTTGACGATATCTTCTCGTCAATTTTCGGTCAGCATGCCCGCCAGAGCCGTCAACGCCCCGCCACACGCGGCCACGATATTGAAATCGAAGTGGCGGTATTCCTCGAAGAAACGCTTACTGAGCATAAGCGTACCATCAGCTATAACCTGCCGGTTTATAACGCCTTTGGCATGATCGAACAGGAAATTCCGAAAACGCTGAATGTGAAGATCCCGGCGGGCGTCGGCAATGGTCAACGCATCCGTCTGAAAGGCCAGGGGACGCCGGGCGAAAACGGCGGTCCAAATGGCGATTTGTGGCTGGTGATTCATATTGCGCCACATCCGCTGTTTGATATTGTCGGCCAGGATCTGGAAATTGTGGTGCCGGTTAGCCCGTGGGAAGCGGCGCTGGGTGCTAAAGTCACCGTTCCAACACTGAAAGAAAGCATTTTGCTGACTATCCCGCCAGGCAGCCAGGCCGGGCAACGATTGCGCGTTAAAGGCAAAGGTCTGGTGAGCAAAAAACAGACCGGCGATCTGTATGCGGTACTGAAAATCGTGATGCCGCCGAAACCGGATGAAAACACTGCCGCGCTGTGGCAGCAACTGGCAGACGCCCAGTCGTCTTTTGATCCACGTAAAGATTGGGGGAAAGCATAA", + "dna_sequence_length": 921, + "functions": [ + "DnaK co-chaperone", + "curved DNA-binding protein" + ], + "id": "CDS_983", + "location": [ + [ + "NC_000913", + 1063775, + "-", + 921 + ] + ], + "md5": "dfd90379de199d47d51099827f10f01b", + "parent_gene": "", + "protein_md5": "603148ec4d7d4becda063da63c3730d0", + "protein_translation": "MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003384" + ], + [ + "gene_synonym", + "ECK0992" + ], + [ + "gene_synonym", + "EcoGene:EG12196" + ], + [ + "gene_synonym", + "GI:16128967" + ], + [ + "gene_synonym", + "GeneID:947468" + ], + [ + "gene_synonym", + "JW0986" + ], + [ + "gene_synonym", + "NP_415521.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36661" + ], + [ + "gene_synonym", + "b1001" + ], + [ + "gene_synonym", + "yccE" + ] + ], + "dna_sequence": "ATGGGTAGTAATATACATGGAATTAGTTGCACTGCAAATAATTATTTGAAACAGGCCTGGAACGATATAAAAAATGAGTACGAAAAAAATCAAACATATTCAATCACGCTTTTTGAAAACACACTGGTGTGTTTTATGCGGTTATACAATGAACTCAGACGTAAAGTAAATGAAGAGGATACTCCATGTCTGGAATGTGAATCACTAGAAAAAGAATTTGAGGAAATGCAGAATGATAATGATCTATCATTATTTATGAGAATATTGCGTACTAATGATACACAAATTTATTCAGGGGTTTCAGGAGGTATTACATATACTATACAATATGTTCGAGATATTGATATTGTTAGAGTGTCCTTGCCGGGCAGAGCTTCAGAGTCTATCACAGATTTTAAAGGTTATTATTGGTATAACTTTATGGAGTATATTGAAAACATTAATGCGTGTGATGATGTTTTTTCTGAGTATTGTTTTGATGATGAAAATATAAGTGTCCAGCCAGAGCGGATAAATACGCCGGGAATATCTGATTTGGATTCTGACATTGATTTGTCTGGTATATCTTTTATTCAGCGTGAAACTAACCAGGCATTAGGATTAAAATATGCTCCTGTAGATGGCGATGGATATTGTCTGTTAAGAGCTATACTGGTTTTAAAACAACATGATTATTCATGGGCGCTGGTCAGTTATAAGATGCAAAAGGAAGTTTACAACGAATTCATTAAAATGGTTGATAAAAAAACGATCGAGGCTCTTGTTGATACGGCATTCTATAATCTCAGGGAAGATGTAAAGACGTTATTTGGCGTTGATCTACAATCTGACAACCAAATTCAGGGGCAGAGTAGTCTTATGTCATGGAGCTTTCTGTTTTTTAAAAAACAATTCATTGATAGTTGCTTGAATAACGAAAAATGTATCCTGCATTTACCCGAGTTTATATTTAATGATAACAAGAACTTGCTTGCTTTAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACGTTTACCTCCCTCCTGAACTTTTTGCTCAGGCTTACAAGTTAAACAATAAGGAAATGAATGCGCAACTCGACTATTTAAATCGTTATGCAATTTAA", + "dna_sequence_length": 1257, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_984", + "location": [ + [ + "NC_000913", + 1064036, + "+", + 1257 + ] + ], + "md5": "ee1c1bd10473358556d0d845e5ad1a4a", + "parent_gene": "", + "protein_md5": "0a7616547170fc1d62e93089e146c886", + "protein_translation": "MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRILRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYNFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLVVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003388" + ], + [ + "gene_synonym", + "ECK0993" + ], + [ + "gene_synonym", + "EcoGene:EG10033" + ], + [ + "gene_synonym", + "GI:16128968" + ], + [ + "gene_synonym", + "GeneID:945773" + ], + [ + "gene_synonym", + "JW0987" + ], + [ + "gene_synonym", + "NP_415522.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19926" + ], + [ + "gene_synonym", + "agp" + ], + [ + "gene_synonym", + "b1002" + ] + ], + "dna_sequence": "ATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGACAGCTACCAGCTACTGGAAAAAATCGTTAACTATAAAGATTCCCCTGCCTGTAAAGAGAAACAACAGTGTTCGCTGGTGGATGGCAAAAATACCTTTAGCGCCAAGTATCAACAAGAACCAGGTGTTTCCGGGCCGCTGAAAGTCGGCAACTCGCTGGTAGATGCGTTTACTTTGCAATATTACGAAGGTTTTCCGATGGATCAGGTGGCCTGGGGAGAAATCAAATCTGACCAGCAGTGGAAGGTGTTGTCGAAGCTTAAAAACGGCTACCAGGACAGCCTGTTTACCTCACCGGAAGTGGCGCGCAATGTTGCGAAACCGCTGGTCAGTTATATCGACAAAGCTCTGGTCACCGATCGCACCAGCGCACCGAAAATTACAGTGTTGGTTGGGCACGACTCCAACATTGCCTCTCTGTTAACGGCGCTGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAA", + "dna_sequence_length": 1242, + "functions": [ + "glucose-1-phosphatase/inositol phosphatase" + ], + "id": "CDS_985", + "location": [ + [ + "NC_000913", + 1065585, + "+", + 1242 + ] + ], + "md5": "7b8ab6f43e7ecaa4e8975697476de5e4", + "parent_gene": "", + "protein_md5": "59c6e65346097099d739383b53092172", + "protein_translation": "MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKFDSVLNEAVK", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003390" + ], + [ + "gene_synonym", + "ECK0994" + ], + [ + "gene_synonym", + "EcoGene:EG12703" + ], + [ + "gene_synonym", + "GI:16128969" + ], + [ + "gene_synonym", + "GeneID:948930" + ], + [ + "gene_synonym", + "JW0988" + ], + [ + "gene_synonym", + "NP_415523.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB14" + ], + [ + "gene_synonym", + "b1003" + ], + [ + "gene_synonym", + "yccJ" + ] + ], + "dna_sequence": "ATGCCAACTCAAGAAGCGAAAGCTCATCACGTCGGTGAATGGGCATCTCTGCGCAATACGTCGCCGGAAATAGCCGAGGCCATTTTCGAAGTCGCCGGGTACGACGAAAAAATGGCGGAAAAGATTTGGGAAGAAGGTAGTGATGAAGTGTTAGTCAAAGCCTTTGCTAAGACCGATAAAGATTCGCTTTTTTGGGGCGAACAGACCATCGAACGTAAAAACGTTTAA", + "dna_sequence_length": 228, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_986", + "location": [ + [ + "NC_000913", + 1067091, + "-", + 228 + ] + ], + "md5": "bd359a0f68a355a1cf024043c34a9646", + "parent_gene": "", + "protein_md5": "01f51658daa54b6fce36cc556c007d30", + "protein_translation": "MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003392" + ], + [ + "gene_synonym", + "ECK0995" + ], + [ + "gene_synonym", + "EcoGene:EG11540" + ], + [ + "gene_synonym", + "GI:16128970" + ], + [ + "gene_synonym", + "GeneID:947263" + ], + [ + "gene_synonym", + "JW0989" + ], + [ + "gene_synonym", + "NP_415524.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8G6" + ], + [ + "gene_synonym", + "b1004" + ], + [ + "gene_synonym", + "wrbA" + ] + ], + "dna_sequence": "ATGGCTAAAGTTCTGGTGCTTTATTATTCCATGTACGGACATATTGAAACGATGGCACGCGCAGTCGCTGAGGGTGCAAGCAAAGTGGATGGCGCTGAAGTTGTCGTTAAGCGTGTACCGGAAACCATGCCGCCGCAATTATTTGAAAAAGCAGGCGGTAAAACGCAAACTGCACCGGTTGCAACCCCGCAAGAACTGGCCGATTACGACGCCATTATTTTTGGTACACCTACCCGCTTTGGCAACATGTCCGGTCAAATGCGTACCTTCCTCGACCAGACGGGCGGCCTGTGGGCTTCCGGCGCACTATACGGAAAACTGGCGAGCGTCTTTAGTTCCACCGGTACTGGCGGCGGTCAGGAACAAACCATCACATCCACCTGGACGACCCTTGCGCATCACGGCATGGTAATTGTCCCTATTGGCTACGCAGCGCAGGAATTATTTGACGTTTCACAGGTTCGCGGCGGTACGCCGTACGGCGCAACCACCATCGCAGGCGGTGACGGTTCACGCCAGCCCAGCCAGGAAGAACTGTCTATTGCTCGTTATCAAGGGGAATATGTCGCAGGTCTGGCAGTTAAACTTAACGGCTAA", + "dna_sequence_length": 597, + "functions": [ + "NAD(P)H:quinone oxidoreductase" + ], + "id": "CDS_987", + "location": [ + [ + "NC_000913", + 1067708, + "-", + 597 + ] + ], + "md5": "e6a76b8ed145ef0039efde1d9e606d73", + "parent_gene": "", + "protein_md5": "0deac7eed1b56ac93421d54513714945", + "protein_translation": "MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285039" + ], + [ + "gene_synonym", + "ECK0996" + ], + [ + "gene_synonym", + "EcoGene:EG14358" + ], + [ + "gene_synonym", + "GI:94541090" + ], + [ + "gene_synonym", + "GeneID:945598" + ], + [ + "gene_synonym", + "JW5136" + ], + [ + "gene_synonym", + "NP_415525.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56614" + ], + [ + "gene_synonym", + "b4518" + ], + [ + "gene_synonym", + "ymdF" + ] + ], + "dna_sequence": "ATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAG", + "dna_sequence_length": 174, + "functions": [ + "KGG family protein" + ], + "id": "CDS_988", + "location": [ + [ + "NC_000913", + 1068081, + "+", + 174 + ] + ], + "md5": "137e197f1b0d947e5798037637d4b20b", + "parent_gene": "", + "protein_md5": "1dcd6d92651c44a7234a28522f3bf66b", + "protein_translation": "MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAGKKGGKSSHGKSDN", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003401" + ], + [ + "gene_synonym", + "ECK0997" + ], + [ + "gene_synonym", + "EcoGene:EG13853" + ], + [ + "gene_synonym", + "GI:90111201" + ], + [ + "gene_synonym", + "GeneID:946589" + ], + [ + "gene_synonym", + "JW5137" + ], + [ + "gene_synonym", + "NP_415526.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75892" + ], + [ + "gene_synonym", + "b1006" + ], + [ + "gene_synonym", + "rutG" + ], + [ + "gene_synonym", + "ycdG" + ] + ], + "dna_sequence": "ATGGCAATGTTCGGTTTTCCTCACTGGCAGTTAAAATCGACCTCTACAGAGAGCGGCGTGGTCGCGCCGGATGAACGATTGCCGTTTGCTCAGACGGCAGTAATGGGCGTTCAACACGCGGTGGCGATGTTTGGCGCGACGGTGTTAATGCCGATTCTGATGGGGCTGGATCCCAATCTTTCCATTTTAATGTCGGGGATCGGCACGTTACTGTTTTTCTTTATTACCGGCGGGCGCGTCCCCAGTTATCTCGGCTCCAGCGCGGCTTTTGTCGGCGTGGTGATCGCCGCGACGGGCTTTAACGGTCAGGGCATTAACCCGAATATCAGCATTGCGCTGGGCGGGATTATCGCCTGTGGGCTGGTTTATACCGTCATTGGCCTGGTGGTGATGAAAATCGGTACGCGCTGGATTGAACGACTGATGCCGCCGGTGGTGACGGGTGCGGTGGTGATGGCGATTGGCCTGAACTTAGCGCCTATCGCAGTGAAAAGTGTATCGGCTTCGGCCTTTGATAGCTGGATGGCGGTAATGACGGTGCTGTGTATTGGGCTGGTGGCGGTGTTTACCCGTGGCATGATCCAGCGGTTATTGATTCTCGTAGGATTAATTGTCGCCTGTCTGCTGTATGGCGTGATGACCAACGTTTTAGGGCTGGGAAAAGCCGTCGATTTTACTCTCGTCAGCCATGCTGCCTGGTTCGGTCTGCCACATTTTTCCACTCCTGCTTTTAATGGTCAGGCAATGATGCTGATTGCGCCCGTGGCGGTGATTCTGGTGGCGGAAAACTTAGGTCATCTCAAGGCAGTCGCCGGGATGACCGGACGCAATATGGACCCGTATATGGGGCGGGCATTCGTAGGCGATGGTCTGGCAACGATGCTTTCCGGCTCTGTCGGCGGTAGCGGCGTGACCACCTATGCTGAAAATATCGGTGTGATGGCCGTGACCAAAGTCTACTCGACGCTGGTGTTTGTTGCTGCTGCCGTCATCGCCATGCTGTTGGGCTTTTCACCGAAATTTGGTGCGCTGATTCATACCATTCCGGCCGCGGTTATTGGTGGTGCATCAATTGTTGTGTTCGGGCTGATTGCCGTCGCAGGCGCAAGGATATGGGTACAAAACCGTGTCGATTTAAGCCAGAACGGTAATTTGATTATGGTCGCAGTAACCTTAGTGCTGGGCGCGGGTGATTTTGCTCTCACGCTGGGCGGTTTTACGTTGGGAGGGATTGGTACAGCAACCTTTGGCGCGATTTTACTCAATGCGTTGTTAAGCAGAAAGTTGGTTGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAA", + "dna_sequence_length": 1329, + "functions": [ + "pyrimidine permease" + ], + "id": "CDS_989", + "location": [ + [ + "NC_000913", + 1069839, + "-", + 1329 + ] + ], + "md5": "dbdfff164920458aa54dbc8b127d2903", + "parent_gene": "", + "protein_md5": "907429ba32352591bacd7f9b4da5df28", + "protein_translation": "MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003403" + ], + [ + "gene_synonym", + "ECK0998" + ], + [ + "gene_synonym", + "EcoGene:EG13854" + ], + [ + "gene_synonym", + "GI:90111202" + ], + [ + "gene_synonym", + "GeneID:946594" + ], + [ + "gene_synonym", + "JW5138" + ], + [ + "gene_synonym", + "NP_415527.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75893" + ], + [ + "gene_synonym", + "b1007" + ], + [ + "gene_synonym", + "rutF" + ], + [ + "gene_synonym", + "ycdH" + ] + ], + "dna_sequence": "ATGAACATTGTCGATCAACAAACTTTTCGCGATGCGATGTCCTGCATGGGCGCGGCGGTCAATATTATCACCACGGACGGTCCAGCCGGGCGCGCCGGGTTCACCGCCAGCGCCGTCTGCAGTGTGACCGATACGCCGCCCACATTACTGGTGTGCCTGAATCGTGGGGCGTCCGTCTGGCCGGCATTCAATGAAAATCGAACGCTGTGTGTAAATACACTTAGCGCCGGGCAGGAGCCGCTTTCAAACCTTTTTGGCGGCAAAACGCCCATGGAACACCGCTTTGCCGCCGCCCGCTGGCAGACGGGGGTGACCGGATGCCCGCAACTGGAAGAGGCTCTGGTTTCGTTTGACTGCCGTATCAGCCAGGTGGTGAGCGTCGGCACCCACGACATTCTGTTTTGCGCCATCGAAGCGATTCATCGTCACACCACACCCTACGGGCTGGTGTGGTTCGATCGCAGTTATCACGCGCTGATGCGCCCTGCTTGTTAA", + "dna_sequence_length": 495, + "functions": [ + "flavin:NADH reductase" + ], + "id": "CDS_990", + "location": [ + [ + "NC_000913", + 1070354, + "-", + 495 + ] + ], + "md5": "3f7ecab82dd83d8299d512c993354b9c", + "parent_gene": "", + "protein_md5": "91b1c38f8f11ee3107655b54fc4427de", + "protein_translation": "MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPAFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHTTPYGLVWFDRSYHALMRPAC", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003407" + ], + [ + "gene_synonym", + "ECK0999" + ], + [ + "gene_synonym", + "EcoGene:EG13855" + ], + [ + "gene_synonym", + "GI:16128974" + ], + [ + "gene_synonym", + "GeneID:946591" + ], + [ + "gene_synonym", + "JW0993" + ], + [ + "gene_synonym", + "NP_415528.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75894" + ], + [ + "gene_synonym", + "b1008" + ], + [ + "gene_synonym", + "rutE" + ], + [ + "gene_synonym", + "ycdI" + ] + ], + "dna_sequence": "ATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCACCCTGTTCACCGATGCCCGCACTCACAACGGCTGGCGGGAGACACCCGTCAGCGATGAGACGTTACGGGAGATTTATGCCCTGATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGCCGGGCGCTGGGACTGGATACCGGCCCGATGTCGGGCTTTGACCGTCAACACGTGGACGACGCCTTTTTTACGGGCAGCACGCTGAAGAGCAATCTGCTGATTAATATCGGCTATGGCGATAGCAGCAAGCTTTATGCGCGCCTGCCACGTCTGTCCTTTGAAGAAGCCTGCGGGCTGTTGTAA", + "dna_sequence_length": 591, + "functions": [ + "putative malonic semialdehyde reductase" + ], + "id": "CDS_991", + "location": [ + [ + "NC_000913", + 1070955, + "-", + 591 + ] + ], + "md5": "7db3f28dabbd694b79e8adb1a5db5a1e", + "parent_gene": "", + "protein_md5": "39f5840e1d18ec1312d9f6ccdc93848d", + "protein_translation": "MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFTRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFTGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003410" + ], + [ + "gene_synonym", + "ECK1000" + ], + [ + "gene_synonym", + "EcoGene:EG13856" + ], + [ + "gene_synonym", + "GI:16128975" + ], + [ + "gene_synonym", + "GeneID:946586" + ], + [ + "gene_synonym", + "JW0994" + ], + [ + "gene_synonym", + "NP_415529.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75895" + ], + [ + "gene_synonym", + "b1009" + ], + [ + "gene_synonym", + "rutD" + ], + [ + "gene_synonym", + "ycdJ" + ] + ], + "dna_sequence": "ATGAAACTTTCACTCTCACCTCCCCCTTATGCTGATGCGCCCGTAGTGGTGTTGATTTCGGGTCTTGGGGGTAGCGGCAGTTACTGGTTACCGCAACTGGCGGTGCTGGAGCAGGAGTATCAGGTAGTCTGTTACGACCAGCGCGGCACCGGCAATAATCCCGACACGCTGGCAGAAGATTACAGTATCGCCCAGATGGCAGCGGAACTGCATCAGGCGCTGGTAGCCGCAGGGATTGAGCATTACGCAGTGGTCGGCCATGCGCTCGGTGCGCTGGTGGGAATGCAGCTGGCGCTGGATTATCCCGCGTCGGTAACTGTGCTGATCAGCGTTAACGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGGCGCGCAGGCATGGGTGGAAGCGCAGCCGTTGTTCCTCTATCCCGCCGACTGGATGGCGGCCCGCGCACCTCGCCTGGAGGCAGAAGACGCGCTGGCACTGGCGCATTTTCAGGGCAAAAATAATTTACTGCGTCGACTTAACGCCCTCAAACGCGCTGACTTTAGTCACCATGCGGATCGCATCCGCTGCCCGGTGCAAATCATCTGCGCCAGTGATGATCTGCTGGTGCCAACAGCATGTTCCAGTGAACTTCATGCCGCCCTGCCCGATAGCCAGAAAATGGTGATGCCCTATGGCGGACACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAA", + "dna_sequence_length": 801, + "functions": [ + "putative reactive intermediate detoxifying aminoacrylate hydrolase" + ], + "id": "CDS_992", + "location": [ + [ + "NC_000913", + 1071765, + "-", + 801 + ] + ], + "md5": "ade3691d5df1609d7dbf325857ec65ae", + "parent_gene": "", + "protein_md5": "d0f8f1f81c23aed95b845fedae8f557c", + "protein_translation": "MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003412" + ], + [ + "gene_synonym", + "ECK1001" + ], + [ + "gene_synonym", + "EcoGene:EG13857" + ], + [ + "gene_synonym", + "GI:16128976" + ], + [ + "gene_synonym", + "GeneID:945599" + ], + [ + "gene_synonym", + "JW0995" + ], + [ + "gene_synonym", + "NP_415530.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFQ5" + ], + [ + "gene_synonym", + "b1010" + ], + [ + "gene_synonym", + "rutC" + ], + [ + "gene_synonym", + "ycdK" + ] + ], + "dna_sequence": "ATGCCAAAATCCGTAATTATTCCCGCTGGCAGCAGCGCACCGCTGGCCCCCTTCGTTCCCGGCACGCTGGCTGATGGCGTGGTGTATGTCTCCGGTACGCTGGCTTTTGATCAACATAATAACGTGCTGTTTGCCGATGACCCAAAGGCGCAAACCCGCCACGTTCTGGAAACTATCCGCAAGGTGATCGAGACGGCGGGTGGCACGATGGCGGATGTGACCTTCAACAGCATCTTTATTACCGACTGGAAAAATTACGCCGCGATTAACGAAATCTACGCCGAGTTTTTTCCGGGTGATAAACCGGCGCGATTCTGCATTCAGTGCGGACTGGTAAAACCTGACGCGCTGGTGGAAATCGCCACAATTGCGCATATCGCCAAGTGA", + "dna_sequence_length": 387, + "functions": [ + "putative aminoacrylate deaminase, reactive intermediate detoxification", + "weak enamine/imine deaminase activity" + ], + "id": "CDS_993", + "location": [ + [ + "NC_000913", + 1072159, + "-", + 387 + ] + ], + "md5": "d27b6edee2231c7b210bdc82b735bf9c", + "parent_gene": "", + "protein_md5": "f32afda8bbffe3f14c1dd9b290121171", + "protein_translation": "MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003414" + ], + [ + "gene_synonym", + "ECK1002" + ], + [ + "gene_synonym", + "EcoGene:EG13858" + ], + [ + "gene_synonym", + "GI:90111203" + ], + [ + "gene_synonym", + "GeneID:945699" + ], + [ + "gene_synonym", + "JW5139" + ], + [ + "gene_synonym", + "NP_415531.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75897" + ], + [ + "gene_synonym", + "b1011" + ], + [ + "gene_synonym", + "rutB" + ], + [ + "gene_synonym", + "ycdL" + ] + ], + "dna_sequence": "ATGACGACCTTAACCGCTCGACCGGAAGCCATTACCTTCGATCCGCAGCAAAGTGCGCTGATCGTGGTGGATATGCAAAACGCTTATGCCACGCCAGGCGGCTACTTAGATCTCGCCGGGTTTGATGTCTCAACCACTCGCCCGGTCATTGCCAACATTCAAACCGCCGTGACCGCAGCGCGAGCGGCAGGGATGCTGATCATCTGGTTTCAAAATGGCTGGGATGAACAGTATGTCGAGGCTGGCGGACCCGGCTCACCGAATTTTCATAAATCGAACGCCCTGAAAACCATGCGTAAGCAGCCGCAGCTGCAGGGGAAATTGCTGGCGAAAGGCTCCTGGGATTATCAACTGGTGGATGAACTGGTGCCGCAGCCTGGCGATATTGTGCTGCCGAAGCCGCGCTACAGCGGTTTCTTCAATACGCCGCTGGACAGCATTTTGCGCAGCCGCGGAATACGCCATCTGGTTTTCACCGGCATCGCTACCAACGTCTGCGTCGAATCGACGCTACGCGACGGCTTTTTTCTGGAGTATTTCGGCGTGGTGCTTGAAGACGCAACTCACCAGGCGGGGCCGAAATTTGCGCAGAAAGCCGCGTTGTTCAATATCGAAACCTTTTTTGGCTGGGTCAGCGACGTCGAAACATTCTGCGACGCGCTTTCTCCCACGTCCTTTGCTCATATCGCTTAA", + "dna_sequence_length": 693, + "functions": [ + "ureidoacrylate amidohydrolase" + ], + "id": "CDS_994", + "location": [ + [ + "NC_000913", + 1072863, + "-", + 693 + ] + ], + "md5": "cae5c8ea91101729db448eccf3275f66", + "parent_gene": "", + "protein_md5": "c21718f4952f1e2734919a6f5f970123", + "protein_translation": "MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003416" + ], + [ + "gene_synonym", + "ECK1003" + ], + [ + "gene_synonym", + "EcoGene:EG13859" + ], + [ + "gene_synonym", + "GI:49176071" + ], + [ + "gene_synonym", + "GeneID:945643" + ], + [ + "gene_synonym", + "JW0997" + ], + [ + "gene_synonym", + "NP_415532.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75898" + ], + [ + "gene_synonym", + "b1012" + ], + [ + "gene_synonym", + "rutA" + ], + [ + "gene_synonym", + "ycdM" + ] + ], + "dna_sequence": "ATGCAGGATGCAGCGCCCCGTCTGACTTTCACTTTACGAGACGAAGAGAGGTTGATGATGAAAATTGGCGTATTCGTACCTATTGGCAACAACGGCTGGCTCATTTCGACCCACGCGCCGCAGTACATGCCGACCTTTGAACTGAATAAAGCCATTGTGCAAAAAGCGGAGCACTACCATTTCGATTTCGCCCTGTCGATGATCAAACTGCGTGGCTTTGGCGGCAAAACTGAGTTCTGGGATCACAACCTTGAGTCGTTCACCTTGATGGCGGGGCTGGCGGCCGTGACCTCGCGCATTCAGATTTACGCCACTGCTGCCACCTTAACGTTACCTCCGGCAATCGTCGCCCGTATGGCCGCAACCATCGACTCCATCTCTGGCGGGCGTTTTGGCGTCAACCTCGTGACTGGCTGGCAAAAGCCCGAGTATGAGCAGATGGGTATCTGGCCTGGCGATGACTATTTCTCCCGTCGTTACGACTATCTCACCGAATATGTTCAGGTGCTGCGCGACCTGTGGGGCACGGGGAAAAGCGATTTTAAAGGCGATTTTTTCACCATGAATGATTGTCGCGTGAGTCCGCAACCGAGTGTCCCCATGAAAGTGATCTGCGCCGGGCAAAGCGACGCTGGCATGGCGTTCTCCGCCCGGTATGCCGATTTCAACTTCTGTTTCGGCAAAGGCGTAAATACACCCACGGCTTTCGCCCCGACCGCTGCGCGGATGAAACAGGCCGCAGAGCAAACCGGACGCGACGTTGGCTCTTATGTGTTGTTTATGGTGATTGCCGATGAAACCGACGATGCCGCTCGCGCCAAATGGGAACACTACAAAGCGGGCGCGGATGAAGAGGCGTTAAGCTGGCTAACCGAACAAAGTCAGAAAGATACCCGCTCCGGTACTGACACCAACGTTCGTCAGATGGCCGATCCCACTTCGGCGGTAAACATCAATATGGGGACGTTAGTCGGTTCTTACGCCAGTGTCGCGCGCATGTTAGATGAAGTCGCAAGCGTGCCTGGTGCCGAAGGCGTGCTGTTAACCTTCGACGATTTTCTGTCGGGAATCGAAACCTTCGGCGAGCGCATTCAACCACTGATGCAATGCCGCGCCCATCTACCTGCGCTGACTCAGGAGGTGGCATGA", + "dna_sequence_length": 1149, + "functions": [ + "pyrimidine oxygenase, FMN-dependent" + ], + "id": "CDS_995", + "location": [ + [ + "NC_000913", + 1074011, + "-", + 1149 + ] + ], + "md5": "68f75c2e4d0200eba29b5f9246cafe04", + "parent_gene": "", + "protein_md5": "6fd762a726bed2f229328b8b53567025", + "protein_translation": "MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003422" + ], + [ + "gene_synonym", + "ECK1004" + ], + [ + "gene_synonym", + "EcoGene:EG12301" + ], + [ + "gene_synonym", + "GI:16128979" + ], + [ + "gene_synonym", + "GeneID:945075" + ], + [ + "gene_synonym", + "JW0998" + ], + [ + "gene_synonym", + "NP_415533.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU2" + ], + [ + "gene_synonym", + "b1013" + ], + [ + "gene_synonym", + "rutR" + ], + [ + "gene_synonym", + "ycdC" + ] + ], + "dna_sequence": "ATGACGCAAGGCGCAGTGAAAACAACGGGTAAACGTTCGCGCGCAGTAAGCGCGAAGAAAAAAGCGATTCTTAGCGCAGCACTGGACACTTTTTCACAATTCGGTTTTCACGGCACAAGGCTGGAGCAGATCGCAGAGTTGGCGGGTGTTTCAAAAACCAATCTGCTGTATTACTTTCCGTCAAAAGAGGCGCTGTATATTGCCGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTGAGGGGATTCGACCACGTTAA", + "dna_sequence_length": 639, + "functions": [ + "rut operon transcriptional repressor for" + ], + "id": "CDS_996", + "location": [ + [ + "NC_000913", + 1074242, + "+", + 639 + ] + ], + "md5": "c680aead575af4382fc93e1cff891bbe", + "parent_gene": "", + "protein_md5": "eb9b9a05110a11a2cf9ed5fbe3e01cdb", + "protein_translation": "MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003424" + ], + [ + "gene_synonym", + "ECK1005" + ], + [ + "gene_synonym", + "EcoGene:EG10801" + ], + [ + "gene_synonym", + "GI:16128980" + ], + [ + "gene_synonym", + "GeneID:945600" + ], + [ + "gene_synonym", + "JW0999" + ], + [ + "gene_synonym", + "NP_415534.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09546" + ], + [ + "gene_synonym", + "b1014" + ], + [ + "gene_synonym", + "poaA" + ], + [ + "gene_synonym", + "putA" + ], + [ + "gene_synonym", + "putC" + ] + ], + "dna_sequence": "ATGGGAACCACCACCATGGGGGTTAAGCTGGACGACGCGACGCGTGAGCGTATTAAGTCTGCCGCGACACGTATCGATCGCACACCACACTGGTTAATTAAGCAGGCGATTTTTTCTTATCTCGAACAACTGGAAAACAGCGATACTCTGCCGGAGCTACCTGCGCTGCTTTCTGGCGCGGCCAATGAGAGCGATGAAGCACCGACTCCGGCAGAGGAACCACACCAGCCATTCCTCGACTTTGCCGAGCAAATATTGCCCCAGTCGGTTTCCCGCGCCGCGATCACCGCGGCCTATCGCCGCCCGGAAACCGAAGCGGTTTCTATGCTGCTGGAACAAGCCCGCCTGCCGCAGCCAGTTGCTGAACAGGCGCACAAACTGGCGTATCAGCTGGCCGATAAACTGCGTAATCAAAAAAATGCCAGTGGTCGCGCAGGTATGGTCCAGGGGTTATTGCAGGAGTTTTCGCTGTCATCGCAGGAAGGCGTGGCGCTGATGTGTCTGGCGGAAGCGTTGTTGCGTATTCCCGACAAAGCCACCCGCGACGCGTTAATTCGCGACAAAATCAGCAACGGTAACTGGCAGTCACACATTGGTCGTAGCCCGTCACTGTTTGTTAATGCCGCCACCTGGGGGCTGCTGTTTACTGGCAAACTGGTTTCCACCCATAACGAAGCCAGCCTCTCCCGCTCGCTGAACCGCATTATCGGTAAAAGCGGTGAACCGCTGATCCGCAAAGGTGTGGATATGGCGATGCGCCTGATGGGTGAGCAGTTCGTCACTGGCGAAACCATCGCGGAAGCGTTAGCCAATGCCCGCAAGCTGGAAGAGAAAGGTTTCCGTTACTCTTACGATATGCTGGGCGAAGCCGCGCTGACCGCCGCAGATGCACAGGCGTATATGGTTTCCTATCAGCAGGCGATTCACGCCATCGGTAAAGCGTCTAACGGTCGTGGCATCTATGAAGGGCCGGGCATTTCAATCAAACTGTCGGCGCTGCATCCGCGTTATAGCCGCGCCCAGTATGACCGGGTAATGGAAGAGCTTTACCCGCGTCTGAAATCACTCACCCTGCTGGCGCGTCAGTACGATATTGGTATCAACATTGACGCCGAAGAGTCCGATCGCCTGGAGATCTCCCTCGATCTGCTGGAAAAACTCTGTTTCGAGCCGGAACTGGCAGGCTGGAACGGCATCGGTTTTGTTATTCAGGCTTATCAAAAACGCTGCCCGTTGGTGATCGATTACCTGATTGATCTCGCCACCCGCAGCCGTCGCCGTCTGATGATTCGCCTGGTGAAAGGCGCGTACTGGGATAGTGAAATTAAGCGTGCGCAGATGGACGGCCTTGAAGGTTATCCGGTTTATACCCGCAAGGTGTATACCGACGTTTCTTATCTCGCCTGTGCGAAAAAGCTGCTGGCGGTGCCGAATCTAATCTACCCGCAGTTCGCGACGCACAACGCCCATACGCTGGCGGCGATTTATCAACTGGCGGGGCAGAACTACTACCCGGGTCAGTACGAGTTCCAGTGCCTGCATGGTATGGGCGAGCCACTGTATGAGCAGGTCACCGGGAAAGTTGCCGACGGCAAACTTAACCGTCCGTGTCGTATTTATGCTCCGGTTGGCACACATGAAACGCTGTTGGCGTATCTGGTGCGTCGCCTGCTGGAAAACGGTGCTAACACCTCGTTTGTTAACCGTATTGCCGACACCTCTTTGCCACTGGATGAACTGGTCGCCGATCCGGTCACTGCTGTAGAAAAACTGGCGCAACAGGAAGGGCAAACTGGATTACCGCATCCGAAAATTCCCCTGCCGCGCGATCTTTACGGTCACGGGCGCGACAACTCGGCAGGGCTGGATCTCGCTAACGAACACCGCCTGGCCTCGCTCTCCTCTGCCCTGCTCAATAGTGCACTGCAAAAATGGCAGGCCTTGCCAATGCTGGAACAACCGGTAGCGGCAGGTGAGATGTCGCCCGTTATTAACCCTGCGGAACCGAAAGATATTGTGGGCTATGTGCGTGAAGCCACGCCGCGTGAAGTAGAACAGGCGCTGGAAAGTGCGGTTAATAACGCGCCAATCTGGTTTGCCACGCCTCCGGCTGAACGCGCAGCGATTTTGCACCGCGCTGCCGTGCTGATGGAAAGCCAGATGCAGCAACTGATTGGTATTCTGGTGCGTGAGGCCGGAAAAACCTTCAGTAACGCCATTGCCGAAGTGCGCGAAGCGGTCGATTTTCTCCACTACTACGCCGGACAGGTGCGGGATGATTTCGCTAACGAAACCCACCGTCCATTAGGGCCTGTGGTGTGTATCAGTCCGTGGAACTTCCCGCTGGCTATTTTCACCGGGCAGATCGCCGCCGCACTGGCGGCAGGTAACAGCGTGCTGGCAAAACCGGCAGAACAAACGCCGCTGATTGCCGCGCAAGGGATCGCCATTTTGCTGGAAGCGGGTGTACCGCCAGGCGTGGTGCAATTGCTGCCAGGTCGGGGTGAAACCGTGGGCGCGCAACTGACGGGTGATGATCGCGTGCGCGGGGTGATGTTTACCGGTTCAACCGAAGTCGCTACGTTACTGCAGCGCAATATCGCCAGCCGCCTGGACGCTCAGGGTCGCCCTATTCCGCTCATCGCTGAAACCGGCGGCATGAACGCGATGATTGTCGATTCTTCAGCACTGACCGAACAGGTCGTCGTGGATGTACTGGCCTCGGCGTTCGACAGTGCGGGTCAGCGTTGTTCGGCGCTGCGCGTGCTGTGCCTGCAAGATGAGATTGCCGACCACACGTTGAAAATGCTGCGCGGCGCAATGGCCGAATGCCGGATGGGTAATCCGGGTCGCCTGACCACCGATATCGGTCCAGTGATTGATAGCGAAGCGAAAGCCAATATTGAGCGCCATATTCAGACCATGCGTAGCAAAGGCCGTCCGGTGTTCCAGGCGGTGCGGGAAAACAGCGAAGATGCCCGTGAATGGCAAAGCGGCACCTTTGTCGCCCCGACGCTGATCGAACTGGATGACTTTGCCGAATTGCAAAAAGAGGTCTTTGGTCCGGTGCTGCATGTGGTGCGTTACAACCGTAACCAGCTACCAGAGCTGATCGAGCAGATTAACGCTTCCGGTTATGGTCTGACGCTTGGCGTCCATACGCGCATTGATGAAACCATCGCCCAGGTCACTGGCTCGGCCCATGTTGGTAACCTGTATGTTAACCGTAATATGGTGGGCGCAGTGGTTGGTGTGCAGCCGTTCGGCGGCGAAGGGTTGTCCGGTACCGGGCCGAAAGCAGGCGGTCCGCTCTATCTCTACCGTCTGCTGGCGAATCGCCCGGAAAGTGCGCTGGCAGTGACGCTCGCGCGTCAGGATGCAAAGTATCCGGTCGATGCGCAGTTGAAAGCCGCATTGACTCAGCCGCTAAATGCACTGCGGGAATGGGCAGCAAATCGTCCAGAATTGCAGGCGTTATGTACGCAATATGGCGAGCTGGCGCAGGCAGGAACACAACGATTGCTGCCGGGGCCGACGGGTGAACGCAACACCTGGACGCTGCTGCCGCGTGAGCGCGTGTTGTGTATTGCCGATGATGAGCAGGATGCGCTGACTCAGCTCGCCGCCGTGCTGGCGGTGGGCAGCCAGGTACTGTGGCCGGATGACGCGCTGCATCGTCAGTTAGTGAAGGCATTGCCATCGGCAGTCAGCGAACGTATTCAACTGGCGAAAGCGGAAAATATAACCGCTCAACCGTTTGATGCGGTGATCTTCCACGGTGATTCGGATCAGCTTCGCGCATTGTGTGAAGCAGTTGCCGCGCGGGATGGCACAATTGTTTCGGTGCAGGGTTTTGCCCGTGGCGAAAGCAATATCCTTCTGGAACGGCTGTATATCGAGCGTTCGCTGAGTGTGAATACCGCTGCCGCTGGCGGTAACGCCAGCTTAATGACTATAGGTTAA", + "dna_sequence_length": 3963, + "functions": [ + "fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase" + ], + "id": "CDS_997", + "location": [ + [ + "NC_000913", + 1078882, + "-", + 3963 + ] + ], + "md5": "ac9d7447d1c251cc0751ce1edd6846d0", + "parent_gene": "", + "protein_md5": "cb099d7af9dc78d3084ecfdafd86c2f0", + "protein_translation": "MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAKYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGTIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG", + "protein_translation_length": 1320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003433" + ], + [ + "gene_synonym", + "ECK1006" + ], + [ + "gene_synonym", + "EcoGene:EG10802" + ], + [ + "gene_synonym", + "GI:16128981" + ], + [ + "gene_synonym", + "GeneID:945602" + ], + [ + "gene_synonym", + "JW1001" + ], + [ + "gene_synonym", + "NP_415535.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07117" + ], + [ + "gene_synonym", + "b1015" + ], + [ + "gene_synonym", + "putC" + ], + [ + "gene_synonym", + "putP" + ] + ], + "dna_sequence": "ATGGCTATTAGCACACCGATGTTGGTGACATTTTGTGTCTATATCTTTGGCATGATATTGATTGGGTTTATCGCCTGGCGATCAACGAAAAACTTTGACGACTATATTCTGGGCGGTCGTAGTCTTGGGCCATTCGTGACGGCATTATCGGCGGGTGCGTCGGATATGAGCGGCTGGCTGTTAATGGGGTTGCCGGGCGCTGTTTTTCTTTCCGGGATTTCCGAAAGCTGGATCGCCATTGGCCTGACATTAGGCGCGTGGATTAACTGGAAGCTGGTGGCCGGGCGGTTGCGTGTGCATACCGAATACAACAATAACGCCTTAACACTGCCGGATTATTTCACCGGGCGCTTTGAAGATAAAAGCCGCATTTTGCGCATTATCTCTGCGCTGGTTATTTTGCTGTTCTTCACCATTTATTGCGCTTCGGGCATTGTGGCAGGCGCGCGTCTGTTTGAAAGTACCTTTGGCATGAGCTACGAAACGGCTCTGTGGGCGGGCGCTGCGGCGACGATCCTTTACACCTTTATTGGCGGTTTCCTCGCGGTGAGCTGGACTGACACTGTACAGGCCAGCCTGATGATTTTTGCCCTGATCCTGACGCCGGTTATCGTCATTATCAGTGTCGGTGGCTTTGGTGACTCGCTGGAAGTGATCAAACAAAAGAGCATCGAAAACGTTGATATGCTCAAAGGTCTGAACTTTGTTGCCATTATCTCACTGATGGGTTGGGGGCTGGGTTACTTCGGGCAGCCGCACATTCTGGCGCGTTTTATGGCGGCGGATTCTCACCACAGCATTGTCCATGCGCGTCGTATTAGTATGACCTGGATGATCCTCTGCCTGGCAGGGGCGGTGGCTGTCGGCTTCTTTGGGATTGCTTACTTTAACGATCATCCGGCGTTGGCTGGTGCGGTAAATCAGAACGCCGAGCGTGTGTTTATCGAACTGGCGCAAATTCTGTTTAACCCGTGGATTGCCGGGATTCTGCTGTCGGCAATTCTGGCGGCGGTAATGTCAACCTTAAGTTGCCAGCTGCTGGTGTGCTCCAGTGCGATTACCGAAGATTTGTACAAAGCGTTTCTGCGTAAACATGCCAGCCAGAAAGAGCTGGTGTGGGTAGGGCGTGTGATGGTGCTGGTGGTGGCGCTGGTGGCGATTGCGCTGGCGGCAAACCCGGAAAACCGCGTGCTGGGCTTAGTGAGCTACGCGTGGGCAGGCTTTGGCGCGGCGTTTGGTCCAGTGGTGCTGTTCTCGGTGATGTGGTCACGCATGACGCGTAACGGTGCGCTGGCGGGGATGATCATCGGTGCGCTGACGGTTATCGTCTGGAAACAGTTCGGCTGGCTGGGACTGTACGAAATTATTCCGGGCTTTATCTTCGGCAGTATTGGGATTGTAGTGTTTAGTTTGCTGGGTAAAGCGCCGTCAGCGGCGATGCAAAAACGCTTTGCCGAGGCCGATGCGCACTATCATTCGGCTCCGCCGTCACGGTTGCAGGAAAGCTAA", + "dna_sequence_length": 1509, + "functions": [ + "proline:sodium symporter" + ], + "id": "CDS_998", + "location": [ + [ + "NC_000913", + 1079305, + "+", + 1509 + ] + ], + "md5": "1f88cba8a4110a27503e6b5a8dd5f476", + "parent_gene": "", + "protein_md5": "c992a9916447b4cd76c3898e35fa760a", + "protein_translation": "MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNDHPALAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES", + "protein_translation_length": 502, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003441" + ], + [ + "gene_synonym", + "ASAP:ABE-0003443" + ], + [ + "gene_synonym", + "ASAP:ABE-0285091" + ], + [ + "gene_synonym", + "ECK1007" + ], + [ + "gene_synonym", + "EcoGene:EG13860" + ], + [ + "gene_synonym", + "GeneID:948956" + ], + [ + "gene_synonym", + "JW1002" + ], + [ + "gene_synonym", + "JW5141" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75901" + ], + [ + "gene_synonym", + "b4490" + ], + [ + "gene_synonym", + "efeU" + ], + [ + "gene_synonym", + "ycdN" + ] + ], + "dna_sequence": "ATGTTTGTTCCGTTTCTCATTATGTTGCGCGAAGGACTTGAAGCCGCGCTGATTGTCAGTTTGATTGCCAGCTATCTTAAGCGTACCCAGCGAGGCCGATGGATTTGTGTGATGTGGATTGGCGTGTTGCTTGCCGCTGCGTTGTGCCTGGGCTTGGGTATCTTCATTAACGAAACCACCGGCGAATTTCCGCAAAAAGAACAGGAACTGTTTGAAGGTATCGTGGCGGTGATCGCCGTGGTGATCCTTACCTGGATGGTTTTCTGGATGCGCAAAGTGTCGCGCAACGTCAAAGTGCAACTGGAACAGGCAGTCGATAGCGCATTGCAGCGTGGAAATCATCATGGCTGGGCGCTGGTGATGATGGTCTTTTTTGCCGTTGCAAGGGAAGGGCTGGAGTCGGTCTTTTTCCTGCTGGCGGCATTTCAACAAGATGTCGGGATCTGGCCGCCGCTGGGTGCAATGCTCGGTCTTGCTACTGCCGTGGTGCTAGGCTTCCTGCTCTACTGGGGCGGTATTCGCCTCAATCTTGGTGCATTTTTTAAATGGACCAGCCTGTTTATTCTCTTCGTCGCCGCAGGGCTGGCAGCTGGTGCCATTCGCGCATTTCATGAAGCCGGATTGTGGAACCACTTTCAGGAAATCGCCTTCGATATGAGTGCGGTGCTCTCAACTCACTCGCTGTTTGGCACGCTGATGGAAGGGATTTTTGGCTATCAGGAAGCGCCGAGCGTCAGCGAAGTCGCCGTCTGGTTTATTTATCTCATCCCGGCGCTGGTGGCATTTGCTCTGCCACCACGCGCAGGGGCGACAGCGTCTCGCTCCGCGTAA", + "dna_sequence_length": 831, + "id": "CDS_999", + "location": [ + [ + "NC_000913", + 1081356, + "+", + 105 + ], + [ + "NC_000913", + 1081460, + "+", + 726 + ] + ], + "md5": "df478d95e4564dafb29e24e8ba4786ab", + "parent_gene": "", + "protein_md5": "6a0030161be4653f637cf58fd452c328", + "protein_translation": "MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWICVMWIGVLLAAALCLGLGIFINETTGEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALVMMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGIFGYQEAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003448" + ], + [ + "gene_synonym", + "ECK1008" + ], + [ + "gene_synonym", + "EcoGene:EG13861" + ], + [ + "gene_synonym", + "GI:16128982" + ], + [ + "gene_synonym", + "GeneID:945603" + ], + [ + "gene_synonym", + "JW1003" + ], + [ + "gene_synonym", + "NP_415537.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB24" + ], + [ + "gene_synonym", + "b1018" + ], + [ + "gene_synonym", + "efeO" + ], + [ + "gene_synonym", + "ycdO" + ] + ], + "dna_sequence": "ATGACCATTAACTTCCGCCGTAACGCATTGCAGTTGAGCGTGGCTGCGCTGTTTTCTTCTGCTTTTATGGCTAACGCCGCTGATGTGCCGCAGGTCAAAGTGACCGTGACGGATAAGCAGTGCGAACCGATGACCATTACGGTTAACGCCGGGAAAACACAGTTCATTATTCAGAACCACAGCCAGAAGGCGCTGGAGTGGGAGATCCTCAAAGGCGTGATGGTGGTGGAAGAGCGGGAAAATATCGCCCCTGGCTTTAGCCAGAAAATGACGGCGAATTTACAGCCTGGCGAATACGATATGACCTGCGGTCTGCTGACTAACCCGAAAGGGAAGTTGATCGTCAAAGGTGAGGCAACGGCGGATGCGGCGCAAAGTGATGCGCTGTTAAGTCTTGGTGGTGCAATTACTGCATATAAAGCGTATGTCATGGCGGAAACCACGCAGCTGGTGACCGACACCAAAGCCTTTACCGACGCGATTAAAGCAGGCGATATCGAAAAAGCGAAAGCACTGTATGCACCGACGCGCCAGCACTATGAGCGTATTGAACCGATTGCTGAACTGTTCTCCGATCTGGATGGCAGCATTGACGCCCGTGAAGATGATTACGAGCAAAAAGCCGCCGACCCAAAATTCACTGGTTTCCACCGTCTGGAAAAAGCATTGTTTGGCGACAACACCACCAAAGGGATGGATCAGTACGCTGAGCAGCTTTATACCGATGTGGTCGATTTGCAAAAACGCATCAGTGAACTGGCTTTCCCACCTTCAAAAGTGGTCGGCGGCGCAGCCGGACTGATTGAGGAAGTGGCAGCCAGCAAAATTAGCGGTGAAGAAGATCGCTACAGCCACACCGATCTGTGGGATTTCCAGGCTAACGTTGAAGGCTCGCAGAAAATTGTCGATTTGCTGCGTCCACAACTGCAAAAAGCCAACCCGGAACTGCTGGCAAAAGTCGATGCCAACTTTAAAAAGGTCGATACCATTCTGGCGAAATACCGTACTAAAGACGGTTTTGAAACCTACGACAAATTGACCGATGCCGACCGGAATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAA", + "dna_sequence_length": 1128, + "functions": [ + "inactive ferrous ion transporter EfeUOB" + ], + "id": "CDS_1000", + "location": [ + [ + "NC_000913", + 1082243, + "+", + 1128 + ] + ], + "md5": "5db7d61c503063a9459494296abc01b9", + "parent_gene": "", + "protein_md5": "23ee0d4a70a2d6d1fd499146cb3c5cc5", + "protein_translation": "MTINFRRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003451" + ], + [ + "gene_synonym", + "ECK1009" + ], + [ + "gene_synonym", + "EcoGene:EG11735" + ], + [ + "gene_synonym", + "GI:16128983" + ], + [ + "gene_synonym", + "GeneID:946500" + ], + [ + "gene_synonym", + "JW1004" + ], + [ + "gene_synonym", + "NP_415538.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31545" + ], + [ + "gene_synonym", + "b1019" + ], + [ + "gene_synonym", + "efeB" + ], + [ + "gene_synonym", + "ycdB" + ] + ], + "dna_sequence": "ATGCAGTATAAAGATGAAAACGGCGTGAATGAACCGTCACGCCGACGTTTACTGAAAGTGATAGGTGCACTGGCGCTGGCGGGAAGTTGTCCGGTCGCTCATGCACAAAAAACGCAAAGTGCGCCGGGTACGCTTTCACCGGATGCTCGCAATGAGAAACAGCCGTTTTATGGTGAGCATCAGGCAGGGATCCTGACGCCACAACAGGCCGCAATGATGCTGGTGGCGTTTGATGTGCTTGCCAGCGATAAAGCCGATCTTGAGCGGTTGTTTCGCTTGTTGACTCAGCGTTTTGCTTTTCTGACTCAGGGCGGAGCAGCACCAGAAACGCCAAATCCGCGCCTGCCACCACTCGATTCCGGCATTCTTGGCGGCTACATTGCGCCCGATAATCTCACCATCACGTTATCGGTGGGTCACTCATTGTTTGATGAGCGCTTTGGCCTTGCGCCACAGATGCCAAAAAAGCTGCAGAAGATGACGCGTTTCCCCAACGACTCGCTGGATGCGGCGTTATGTCATGGTGATGTGTTGCTACAGATTTGCGCCAACACCCAGGACACGGTTATCCATGCGCTGCGCGATATCATCAAACACACGCCGGATTTGCTCAGTGTGCGCTGGAAGCGGGAAGGGTTTATTTCCGATCACGCGGCGCGTAGTAAAGGCAAAGAGACGCCGATTAATTTGCTGGGTTTCAAAGACGGCACTGCCAATCCCGATAGCCAGAATGATAAGTTGATGCAAAAAGTGGTGTGGGTAACGGCAGATCAGCAGGAGCCTGCGTGGACAATCGGTGGCAGCTATCAGGCAGTACGCTTGATTCAGTTTCGAGTGGAATTTTGGGACAGAACGCCGCTGAAAGAACAGCAGACGATTTTTGGCCGTGATAAGCAAACCGGTGCGCCGCTGGGAATGCAGCATGAGCATGATGTGCCTGATTACGCCAGCGACCCGGAAGGGAAGGTGATCGCGCTGGACAGCCATATCCGGCTGGCGAATCCCCGCACGGCGGAGAGTGAGTCCAGCCTGATGCTGCGTCGTGGCTACAGTTATTCACTGGGCGTCACCAACTCCGGGCAACTGGATATGGGGTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAA", + "dna_sequence_length": 1272, + "functions": [ + "deferrrochelatase, periplasmic" + ], + "id": "CDS_1001", + "location": [ + [ + "NC_000913", + 1083376, + "+", + 1272 + ] + ], + "md5": "a6365b148242dc562dcdf582920fafda", + "parent_gene": "", + "protein_md5": "1b132ebafe918ddb07ad91bf691ba8ce", + "protein_translation": "MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYFGSALLRV", + "protein_translation_length": 423, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003458" + ], + [ + "gene_synonym", + "ECK1010" + ], + [ + "gene_synonym", + "EcoGene:EG11734" + ], + [ + "gene_synonym", + "GI:16128984" + ], + [ + "gene_synonym", + "GeneID:948010" + ], + [ + "gene_synonym", + "JW1005" + ], + [ + "gene_synonym", + "NP_415539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K1" + ], + [ + "gene_synonym", + "b1020" + ], + [ + "gene_synonym", + "phoH" + ], + [ + "gene_synonym", + "psiH" + ] + ], + "dna_sequence": "ATGGTAACGTCCTGTACTGGACATGTTTTAGATAATCAACGCGCCACCACTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCCTTTCTTTTCATGTGTTACCGACGCCGTAAACGGTGCGCGTAGCCGTTTTTCGGCATTTTATCCAAAAGCAAACTATGGCTTACAAGGAAGCCAACCCTCTGATGTTCGTGCGCATAATCGCGCTGCCAACGGCGCGTGTGATGAATACAAACAACTCAAGGTGCTCTCCATGGGAAGACAAAAAGCAGTGATCAAAGCTCGTCGCGAGGCAAAACGTGTGCTGAGACGGGATTCGCGCAGCCATAAGCAGCGTGAAGAAGAATCGGTCACCTCGCTTGTGCAGATGGGCGGCGTAGAAGCCATTGGTATGGCCCGCGACAGTCGCGATACTTCGCCCATCCTCGCGCGAAATGAAGCGCAATTGCACTATCTGAAGGCTATTGAGAGTAAGCAGCTGATATTCGCCACGGGCGAAGCCGGGTGCGGAAAAACCTGGATCAGCGCAGCAAAAGCGGCAGAGGCCCTGATACATAAGGATGTCGACAGGATTATCGTCACCCGTCCAGTTCTGCAAGCCGATGAAGATCTTGGCTTCTTACCTGGAGATATCGCAGAAAAGTTTGCTCCCTATTTTCGCCCGGTCTACGACGTGCTGGTCCGGCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATGCAGTCGTCATTCTTGACGAGGCGCAGAATGTGACTGCCGCGCAAATGAAAATGTTTTTAACCCGCCTCGGGGAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAA", + "dna_sequence_length": 1065, + "functions": [ + "ATP-binding protein", + "putative PhoH family P-loop ATPase" + ], + "id": "CDS_1002", + "location": [ + [ + "NC_000913", + 1084992, + "+", + 1065 + ] + ], + "md5": "fbf3460e0aa9c103d6169d3233e6bcbc", + "parent_gene": "", + "protein_md5": "bfbd420a3b0d77600aa5fd8fa6876f2d", + "protein_translation": "MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDAVNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003460" + ], + [ + "gene_synonym", + "ECK1011" + ], + [ + "gene_synonym", + "EcoGene:EG13862" + ], + [ + "gene_synonym", + "GI:16128985" + ], + [ + "gene_synonym", + "GeneID:947503" + ], + [ + "gene_synonym", + "JW1006" + ], + [ + "gene_synonym", + "NP_415540.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69432" + ], + [ + "gene_synonym", + "b1021" + ], + [ + "gene_synonym", + "hmsS" + ], + [ + "gene_synonym", + "pgaD" + ], + [ + "gene_synonym", + "ycdP" + ] + ], + "dna_sequence": "ATGAACAATTTAATTATTACGACCCGACAATCACCAGTACGTTTACTGGTTGATTATGTTGCCACAACCATCTTGTGGACATTATTTGCGTTGTTCATATTCTTATTCGCCATGGATCTGCTGACGGGTTATTACTGGCAAAGCGAGGCCAGAAGCCGACTTCAGTTCTATTTTTTGCTGGCAGTGGCGAATGCCGTCGTGTTAATTGTCTGGGCGCTGTACAATAAGCTGCGTTTTCAAAAACAGCAGCATCATGCAGCCTACCAATATACGCCGCAAGAATATGCAGAGAGCTTAGCAATACCTGATGAGCTCTATCAGCAACTACAAAAAAGCCACAGGATGAGCGTACACTTCACCAGCCAGGGGCAAATAAAAATGGTTGTTTCAGAAAAAGCGCTAGTCCGGGCATAA", + "dna_sequence_length": 414, + "functions": [ + "biofilm PGA synthase PgaCD, regulatory subunit", + "c-di-GMP-stimulated activity and dimerization" + ], + "id": "CDS_1003", + "location": [ + [ + "NC_000913", + 1086519, + "-", + 414 + ] + ], + "md5": "dc0f72d4bcffb39907d61383b78d3454", + "parent_gene": "", + "protein_md5": "c3167972b4a42808c1f27d2cad0ddb1d", + "protein_translation": "MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003464" + ], + [ + "gene_synonym", + "ECK1012" + ], + [ + "gene_synonym", + "EcoGene:EG13863" + ], + [ + "gene_synonym", + "GI:16128986" + ], + [ + "gene_synonym", + "GeneID:945606" + ], + [ + "gene_synonym", + "JW1007" + ], + [ + "gene_synonym", + "NP_415541.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75905" + ], + [ + "gene_synonym", + "b1022" + ], + [ + "gene_synonym", + "hmsR" + ], + [ + "gene_synonym", + "pgaC" + ], + [ + "gene_synonym", + "ycdQ" + ] + ], + "dna_sequence": "ATGATTAATCGCATCGTATCGTTTTTTATATTATGTCTGGTGTTATGCATACCCCTATGCGTAGCGTACTTTCACTCTGGTGAACTGATGATGAGGTTCGTTTTCTTCTGGCCGTTTTTTATGTCCATTATGTGGATTGTTGGCGGCGTCTATTTCTGGGTCTATCGTGAACGCCACTGGCCGTGGGGAGAAAACGCACCAGCTCCCCAGTTGAAAGATAATCCGTCTATCTCCATTATCATTCCCTGTTTTAATGAGGAGAAAAACGTTGAGGAAACCATACACGCCGCTTTAGCACAGCGTTATGAGAACATTGAAGTTATTGCCGTAAATGACGGTTCAACAGATAAAACCCGTGCCATCCTGGATCGCATGGCTGCACAAATTCCCCATTTGCGGGTCATTCATCTGGCGCAAAACCAGGGGAAAGCCATTGCGCTTAAAACCGGAGCTGCCGCGGCGAAAAGTGAATATCTGGTGTGCATTGATGGCGATGCGTTATTAGACCGCGATGCGGCGGCATATATTGTGGAACCGATGTTGTACAACCCGCGTGTGGGTGCCGTAACCGGTAATCCTCGTATTCGAACACGTTCTACCCTGGTGGGTAAAATTCAGGTTGGCGAGTATTCCTCAATTATTGGTTTGATCAAGCGAACCCAGCGTATCTATGGAAACGTATTTACCGTTTCCGGTGTTATTGCCGCATTTCGTCGCAGCGCCCTGGCAGAAGTGGGTTACTGGAGTGACGATATGATCACCGAAGATATTGATATTAGCTGGAAGCTGCAGTTGAATCAGTGGACGATTTTTTACGAGCCACGGGCACTGTGCTGGATATTAATGCCTGAAACGTTAAAAGGGCTGTGGAAACAGCGCCTGCGCTGGGCTCAGGGCGGTGCAGAAGTATTCCTCAAAAATATGACAAGGTTGTGGCGCAAAGAAAACTTTCGAATGTGGCCGCTGTTTTTTGAATACTGCCTGACGACAATATGGGCCTTCACCTGCCTGGTCGGTTTCATTATTTACGCAGTCCAACTTGCCGGTGTACCGTTAAATATTGAATTGACACATATCGCTGCGACACATACTGCCGGAATATTATTGTGTACGTTATGTTTACTGCAATTTATTGTCAGCCTGATGATCGAGAATCGCTATGAGCATAATCTGACTTCATCGCTTTTCTGGATTATTTGGTTCCCGGTTATTTTCTGGATGCTGAGCCTGGCAACGACATTGGTATCATTTACACGAGTCATGTTGATGCCTAAAAAGCAACGCGCCCGTTGGGTAAGTCCCGATCGCGGGATTCTGAGAGGTTAA", + "dna_sequence_length": 1326, + "functions": [ + "biofilm PGA synthase PgaCD, catalytic subunit", + "poly-beta-1,6-N-acetyl-D-glucosamine synthase" + ], + "id": "CDS_1004", + "location": [ + [ + "NC_000913", + 1087846, + "-", + 1326 + ] + ], + "md5": "86f528f0fc0d96c75ddd82bedb4fa7a1", + "parent_gene": "", + "protein_md5": "904b57c2698f1a062f240a0717ad169d", + "protein_translation": "MINRIVSFFILCLVLCIPLCVAYFHSGELMMRFVFFWPFFMSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQRYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLVCIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIKRTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGFIIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLTSSLFWIIWFPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG", + "protein_translation_length": 441, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003467" + ], + [ + "gene_synonym", + "ECK1013" + ], + [ + "gene_synonym", + "EcoGene:EG13864" + ], + [ + "gene_synonym", + "GI:16128987" + ], + [ + "gene_synonym", + "GeneID:945604" + ], + [ + "gene_synonym", + "JW5142" + ], + [ + "gene_synonym", + "NP_415542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75906" + ], + [ + "gene_synonym", + "b1023" + ], + [ + "gene_synonym", + "pgaB" + ], + [ + "gene_synonym", + "ycdR" + ] + ], + "dna_sequence": "ATGTTACGTAATGGAAATAAATATCTCCTGATGCTGGTGAGTATAATTATGCTCACCGCGTGCATTAGCCAGTCAAGAACATCATTTATACCGCCACAGGATCGCGAATCTTTACTCGCCGAGCAACCGTGGCCGCATAATGGTTTTGTAGCGATTTCATGGCATAACGTTGAAGACGAAGCTGCCGACCAGCGTTTTATGTCAGTGCGGACATCAGCACTGCGTGAACAATTTGCCTGGCTGCGCGAGAACGGTTATCAACCGGTCAGTATTGCTCAAATTCGTGAAGCACATCGAGGAGGAAAACCGCTACCGGAAAAAGCTGTAGTGCTGACTTTTGATGACGGCTACCAGAGTTTTTATACCCGCGTCTTCCCAATTCTTCAGGCCTTCCAGTGGCCTGCTGTATGGGCCCCCGTCGGCAGTTGGGTCGATACGCCAGCGGATAAACAAGTAAAATTTGGCGATGAGTTGGTCGATCGAGAATATTTTGCCACGTGGCAACAAGTGCGAGAAGTTGCGCGTTCCCGGCTCGTTGAGCTCGCTTCTCATACATGGAATTCTCACTACGGTATTCAGGCTAATGCCACCGGCAGCTTATTGCCTGTATATGTAAATCGTGCATATTTTACTGACCACGCACGGTATGAAACCGCAGCAGAATACCGGGAAAGAATTCGTCTGGATGCTGTAAAAATGACGGAATACCTGCGTACAAAGGTTGAGGTAAATCCACACGTTTTTGTTTGGCCTTATGGCGAAGCGAATGGCATAGCGATAGAGGAATTAAAAAAACTCGGTTATGACATGTTCTTCACCCTTGAATCAGGTTTGGCAAATGCGTCGCAATTGGATTCCATTCCGCGGGTATTAATCGCCAATAATCCCTCATTAAAAGAGTTTGCCCAGCAAATTATTACCGTACAGGAAAAATCACCACAACGGATAATGCATATCGATCTTGATTACGTTTATGACGAAAACCTCCAGCAAATGGATCGCAATATTGATGTGCTAATTCAGCGGGTGAAAGATATGCAAATATCAACCGTGTATTTGCAGGCATTTGCTGATCCCGATGGTGATGGGCTGGTCAAAGAGGTCTGGTTTCCAAATCGTTTGCTACCAATGAAAGCAGATATTTTTAGTCGGGTTGCCTGGCAATTACGTACCCGCTCAGGTGTAAACATCTATGCGTGGATGCCGGTATTAAGCTGGGATTTAGATCCCACATTAACGCGAGTAAAATACTTACCAACAGGGGAGAAAAAAGCACAAATTCATCCTGAACAATATCACCGTCTCTCTCCTTTCGATGACAGAGTCAGAGCACAAGTTGGCATGTTATATGAAGATCTTGCCGGACATGCTGCTTTTGATGGCATATTGTTCCACGATGATGCTTTGCTTTCAGATTATGAAGATGCCAGTGCACCGGCTATCACGGCTTATCAGCAAGCAGGCTTTAGCGGGAGTCTGAGCGAAATTCGACAAAACCCGGAGCAATTTAAACAGTGGGCCCGCTTTAAAAGTCGTGCGTTAACTGACTTCACTTTAGAACTTAGTGCGCGCGTAAAAGCCATTCGCGGTCCACATATTAAAACTGCACGAAATATTTTTGCACTTCCGGTAATACAACCTGAAAGTGAAGCCTGGTTTGCACAGAATTATGCTGATTTCCTAAAAAGCTATGACTGGACCGCTATTATGGCTATGCCTTATCTGGAAGGTGTCGCAGAAAAATCGGCTGACCAATGGTTAATACAATTGACCAATCAAATTAAAAACATCCCTCAGGCTAAAGACAAATCTATTTTAGAATTACAGGCACAAAACTGGCAGAAAAATGGTCAGCATCAGGCTATTTCTTCGCAACAACTCGCTCACTGGATGAGCCTATTACAACTGAATGGAGTGAAAAACTATGGTTATTATCCCGACAATTTTCTGCATAACCAACCTGAAATAGACCTTATTCGTCCTGAGTTTTCAACAGCCTGGTATCCGAAAAATGATTAA", + "dna_sequence_length": 2019, + "functions": [ + "poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein" + ], + "id": "CDS_1005", + "location": [ + [ + "NC_000913", + 1089857, + "-", + 2019 + ] + ], + "md5": "56638c3fa3c0a48211adf0d8c8418f26", + "parent_gene": "", + "protein_md5": "107030cbb72fb262decf0411880b083f", + "protein_translation": "MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIRPEFSTAWYPKND", + "protein_translation_length": 672, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003469" + ], + [ + "gene_synonym", + "ECK1014" + ], + [ + "gene_synonym", + "EcoGene:EG13865" + ], + [ + "gene_synonym", + "GI:16128988" + ], + [ + "gene_synonym", + "GeneID:945596" + ], + [ + "gene_synonym", + "JW1010" + ], + [ + "gene_synonym", + "NP_415543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69434" + ], + [ + "gene_synonym", + "b1024" + ], + [ + "gene_synonym", + "pgaA" + ], + [ + "gene_synonym", + "ycdS" + ] + ], + "dna_sequence": "ATGTATTCAAGTAGCAGAAAAAGGTGCCCGAAAACCAAATGGGCTTTGAAACTTCTTACTGCCGCATTTTTAGCAGCGAGTCCCGCGGCGAAGAGTGCTGTTAATAACGCCTATGATGCATTGATTATTGAAGCTCGCAAGGGTAATACTCAGCCAGCTTTGTCATGGTTTGCACTAAAATCAGCACTCAGCAATAACCAAATTGCTGACTGGTTACAGATTGCCTTATGGGCCGGGCAAGATAAACAGGTTATTACCGTTTACAACCGCTACCGTCATCAGCAATTACCAGCGCGTGGTTATGCAGCTGTCGCCGTCGCTTATCGTAACCTGCAACAATGGCAAAACTCGCTTACACTGTGGCAAAAGGCGCTCTCTCTGGAGCCGCAAAATAAGGATTATCAACGGGGACAAATTTTAACCCTGGCAGATGCTGGTCACTATGATACTGCGCTGGTTAAACTTAAGCAGCTTAACTCTGGAGCACCGGACAAAGCCAATTTACTCGCAGAAGCCTATATCTATAAACTGGCGGGGCGTCATCAGGATGAATTACGGGCGATGACAGAGTCATTACCTGAAAATGCATCTACGCAACAATATCCCACAGAATACGTGCAGGCATTACGTAATAATCAACTTGCTGCCGCGATTGACGATGCCAATTTAACGCCAGATATTCGCGCTGATATTCATGCCGAACTGGTCAGACTGTCGTTTATGCCTACGCGCAGTGAAAGTGAACGTTATGCCATTGCCGATCGCGCCCTCGCCCAATACGCTGCATTAGAAATTCTGTGGCACGATAACCCAGACCGCACTGCCCAGTACCAGCGTATTCAGGTTGATCATCTTGGCGCGTTATTAACTCGCGATCGTTATAAAGACGTTATTTCTCACTATCAGCGATTAAAAAAGACGGGGCAAATTATTCCGCCCTGGGGGCAATATTGGGTTGCATCGGCTTATCTCAAAGATCATCAGCCGAAAAAAGCACAGTCAATAATGACCGAGCTCTTTTATCACAAGGAGACCATTGCCCCGGATTTATCCGATGAAGAACTTGCGGATCTCTTTTACAGCCACCTGGAGAGTGAAAATTATCCGGGCGCGCTAACTGTCACCCAACATACCATTAATACTTCGCCGCCTTTCCTTCGGTTAATGGGCACGCCTACGAGCATCCCGAATGATACCTGGTTACAGGGGCATTCGTTTCTCTCAACCGTAGCAAAATATAGTAATGATCTTCCTCAGGCTGAAATGACAGCCAGAGAGCTTGCTTATAACGCACCAGGAAATCAGGGACTGCGCATTGATTACGCGAGTGTGTTACAAGCCCGCGGTTGGCCTCGTGCAGCAGAAAATGAATTAAAAAAAGCAGAAGTGATCGAGCCACGTAATATTAATCTGGAGGTTGAACAAGCCTGGACAGCATTAACGTTACAAGAATGGCAGCAGGCAGCTGTCTTAACGCACGATGTTGTCGAACGTGAACCGCAAGATCCCGGCGTTGTACGATTAAAACGTGCGGTTGATGTACATAATCTTGCAGAGCTTCGTATCGCTGGCTCAACAGGAATTGATGCCGAAGGCCCGGATAGTGGTAAACATGATGTCGACTTAACCACCATCGTTTATTCACCACCGCTGAAGGATAACTGGCGCGGTTTTGCTGGATTCGGTTATGCCGATGGACAATTTAGCGAAGGAAAAGGGATTGTTCGCGACTGGCTTGCGGGTGTTGAGTGGCGGTCACGTAATATCTGGCTCGAGGCAGAGTACGCTGAACGCGTTTTCAATCATGAGCATAAACCCGGCGCGCGCCTGTCTGGCTGGTATGATTTTAATGATAACTGGCGTATTGGTTCGCAACTGGAACGCCTCTCTCACCGCGTTCCATTACGGGCAATGAAAAATGGTGTTACAGGCAACAGTGCTCAGGCTTATGTTCGCTGGTATCAAAATGAGCGGCGTAAGTACGGTGTCTCCTGGGCTTTCACTGATTTTTCCGACAGTAACCAGCGTCATGAAGTCTCACTTGAGGGTCAGGAACGCATCTGGTCTTCACCATATTTGATTGTCGATTTCCTACCCAGTCTGTATTACGAACAAAATACAGAACACGATACCCCATACTACAACCCTATAAAAACGTTCGATATTGTTCCGGCATTTGAGGCAAGCCATTTGTTATGGCGAAGCTATGAAAATAGCTGGGAGCAAATATTCAGCGCAGGTGTTGGTGCCTCCTGGCAAAAACATTATGGCACGGATGTCGTCACCCAACTCGGCTACGGGCAACGCATTAGTTGGAATGACGTGATTGATGCTGGCGCAACGCTACGCTGGGAAAAACGACCTTATGACGGTGACAGAGAACACAACTTATACGTTGAATTCGATATGACATTCAGATTTTAA", + "dna_sequence_length": 2424, + "functions": [ + "biofilm adhesin polysaccharide PGA secretin", + "OM porin", + "poly-beta-1,6-N-acetyl-D-glucosamine export protein" + ], + "id": "CDS_1006", + "location": [ + [ + "NC_000913", + 1092289, + "-", + 2424 + ] + ], + "md5": "a405369139f43a3b5256164ed67e7537", + "parent_gene": "", + "protein_md5": "05b021c6d1aa356af80558101e262bbf", + "protein_translation": "MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALSWFALKSALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYAAVAVAYRNLQQWQNSLTLWQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAPDKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSFMPTRSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVIEPRNINLEVEQAWTALTLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPDSGKHDVDLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVFNHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRKYGVSWAFTDFSDSNQRHEVSLEGQERIWSSPYLIVDFLPSLYYEQNTEHDTPYYNPIKTFDIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGATLRWEKRPYDGDREHNLYVEFDMTFRF", + "protein_translation_length": 807, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003472" + ], + [ + "gene_synonym", + "ECK1015" + ], + [ + "gene_synonym", + "EcoGene:EG13866" + ], + [ + "gene_synonym", + "GI:16128989" + ], + [ + "gene_synonym", + "GeneID:945593" + ], + [ + "gene_synonym", + "JW5143" + ], + [ + "gene_synonym", + "NP_415544.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75908" + ], + [ + "gene_synonym", + "b1025" + ], + [ + "gene_synonym", + "ycdT" + ] + ], + "dna_sequence": "ATGGAAAAAGACTATTTGAGAATTAGTAGTACTGTATTAGTGAGCTTATTGTTTGGGCTTGCTTTGGTTTTGGTGAATAGTTGGTTTAATCAGCCAGGCGTTGAGGAAGTTGTTCCACGATCAACCTATCTGATGGTAATGATTGCTTTATTTTTTATCGATACTGTTGCATTTATTTTTATGCAGTTGTATTTCATTTATGACCGTAGGCAATTTTCAAACTGTGTACTTAGTTTGGCTTTTCTGAGTTGTTTGATTTACTTTGTTATAACCGTCATTATCATTCAGCAAATTATTGAGGAGCGTTTGACAAGCAGTGTTGTCCAAAATGACATTGCAATCTATTATTTGTTTCGTCAGATGAGTTTGTGCATATTAATATTTCTGGCATTGGTGAATAAAGTTAGTGAAAACACAAAACAGCGCAATTTATTTTCCAAAAAAATGACTTTGTGCATAAGTTTGTTTTTTGTTTTTGGGGGGCCGATAGTTGCTCACATACTTTCTAGTCATTATGAGAGCTACAATTTACACATTGCCGAGTTAACCAATGAAAATGGTCAGGTGGTTTGGAAAGCCTCATATGTTACCATAATGATTTTCATGTGGTTAACCTTGCTTTCGGTTAATCTATACTTTAATGGTTTACGCTATGATATCTGGAATGGAGTGACGGTGATTGCTTTTTGTGCCGTACTGTACAATATCTCTCTGTTATTTATGAGCAGGTATAGCGTGTCCACTTGGTATATTAGTCGCACTATTGAAGTAGTCAGTAAGTTAACCGTTATGGTAATATTTATGTGCCATATATTCAGTGCGCTACGAGTAACAAAGAACATTGCACATCGCGATCCCTTAACCAATATATTTAACAGAAATTATTTTTTTAATGAACTGACAGTTCAATCAGCATCAGCCCAAAAAACGCCTTATTGCGTCATGATTATGGATATCGACCACTTCAAAAAAGTCAACGACACCTGGGGGCATCCGGTTGGCGATCAGGTGATAAAAACAGTGGTGAATATCATTGGGAAAAGCATACGACCAGATGACCTTTTAGCGCGCGTCGGCGGCGAAGAGTTTGGCGTCTTGCTGACGGACATCGATACTGAACGTGCGAAAGCTTTAGCGGAAAGGATTCGGGAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGTGAGGGATGTGGTGAATTTTTGTGAGTCACCATAA", + "dna_sequence_length": 1359, + "functions": [ + "diguanylate cyclase, membrane-anchored" + ], + "id": "CDS_1007", + "location": [ + [ + "NC_000913", + 1092876, + "+", + 1359 + ] + ], + "md5": "f088ee6b668f2f245b8559b4fa7d15ae", + "parent_gene": "", + "protein_md5": "cd631c4055f99fff2a40d2592c38590b", + "protein_translation": "MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003475" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16128990" + ], + [ + "gene_synonym", + "GeneID:945587" + ], + [ + "gene_synonym", + "NP_415545.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF82" + ], + [ + "gene_synonym", + "b1026" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", + "dna_sequence_length": 867, + "functions": [ + "IS3 transposase B" + ], + "id": "CDS_1008", + "location": [ + [ + "NC_000913", + 1095141, + "-", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003477" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524706" + ], + [ + "gene_synonym", + "GeneID:945584" + ], + [ + "gene_synonym", + "NP_415546.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF69" + ], + [ + "gene_synonym", + "b1027" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_1009", + "location": [ + [ + "NC_000913", + 1095437, + "-", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003486" + ], + [ + "gene_synonym", + "ECK1016" + ], + [ + "gene_synonym", + "EcoGene:EG14357" + ], + [ + "gene_synonym", + "GeneID:945589" + ], + [ + "gene_synonym", + "JW5145" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q7DFV4" + ], + [ + "gene_synonym", + "b1028" + ], + [ + "gene_synonym", + "ymdE" + ] + ], + "dna_sequence": "GCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAAATCTCTCATTACACTTAACTCATACGGTGAAATGGACTGAATCTCTCGATACATTTCTGAATATGCCAACCCCGGTAGCTTTCCTTGAAATAAGTAATAAGCCCTATTTGGGGAATATGTTAAATGATTTTGCTGGCGTGGATCAGCAACGAGTTATGCATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGA", + "dna_sequence_length": 342, + "id": "CDS_1010", + "location": [ + [ + "NC_000913", + 1095505, + "+", + 342 + ] + ], + "md5": "164b87cf6905d554f3d87ba80f47f60c", + "parent_gene": "", + "protein_md5": "e9009a37473a2cf2c69ac918de4271c2", + "protein_translation": "AWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003489" + ], + [ + "gene_synonym", + "ECK1017" + ], + [ + "gene_synonym", + "EcoGene:EG13867" + ], + [ + "gene_synonym", + "GI:16128993" + ], + [ + "gene_synonym", + "GeneID:945592" + ], + [ + "gene_synonym", + "JW1015" + ], + [ + "gene_synonym", + "NP_415548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75910" + ], + [ + "gene_synonym", + "b1029" + ], + [ + "gene_synonym", + "ycdU" + ] + ], + "dna_sequence": "ATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATATACATTTATGCTATTGGACTTATTCTGATAGGCTTTTATTGGAAGAATGCAGGGTTTACTTTTCCATCAGAGGATATTGGTGTAGTTAGTGGGATTCTGGCTCTGGTGCTGTATAATTTTATTTTTGATCTCAAGGCGTACTGGGCTTATAAATGCGTCACGAAGAATATCGATTTTTCGTGGTTTAAGAAAAAGCAGAACCACAAAATAGAATTATTTCTTACACAACCTCTGGTGGCAGGATTTCTGTCGTTAATCATGTTGAGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCCGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGAAAAAAGTAAAATATAAAAGTCTGACTCGCTATGTGCTGCTTTCGGTGTGCATCTCAACGGTTGTTAACCTGCTTACTATCAGCCCGTTGCGTAACAGTGATTCTTTTGTGACAGAGGGGCAGTGGTTAACGTTTAAATCGATAATTGCATTGCTCATTCTTTGTGGCGTAGTGTTGGCGATTAATCTGTTTTTTCTGCGCTTCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAGTGAAAATGCGTTGTCGACCTTTTTTGCCAAGCCGCTTTGGCTTCGGTTATTCATATTGCTGGTTATTGAAGTGATGTGGATTACGCTGGTGTCGGTATTGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGA", + "dna_sequence_length": 987, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_1011", + "location": [ + [ + "NC_000913", + 1095843, + "+", + 987 + ] + ], + "md5": "9fec56fa990993e631fea9f73089c562", + "parent_gene": "", + "protein_md5": "443037e412687c305e27418c71575bab", + "protein_translation": "MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDIGVVSGILALVLYNFIFDLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLSLIMLSAMSWGLYQLLPSLYALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYKSLTRYVLLSVCISTVVNLLTISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLFFLRFSKRYAFLGRLFLQEIDLFFSSENALSTFFAKPLWLRLFILLVIEVMWITLVSVLATLVEWRIWFEAYFLLCYVPCLIYYFFYCRFLWHNDFMMACDMYFRWGHFNK", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003503" + ], + [ + "gene_synonym", + "ECK1019" + ], + [ + "gene_synonym", + "EcoGene:EG13869" + ], + [ + "gene_synonym", + "GI:90111205" + ], + [ + "gene_synonym", + "GeneID:946431" + ], + [ + "gene_synonym", + "JW5146" + ], + [ + "gene_synonym", + "NP_415551.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75913" + ], + [ + "gene_synonym", + "b1033" + ], + [ + "gene_synonym", + "ghrA" + ], + [ + "gene_synonym", + "ycdW" + ] + ], + "dna_sequence": "ATGGATATCATCTTTTATCACCCAACGTTCGATACCCAATGGTGGATTGAGGCACTGCGCAAAGCTATTCCTCAGGCAAGAGTCAGAGCATGGAAAAGCGGAGATAATGACTCTGCTGATTATGCTTTAGTCTGGCATCCTCCTGTTGAAATGCTGGCAGGGCGCGATCTTAAAGCGGTGTTCGCACTCGGGGCCGGTGTTGATTCTATTTTGAGCAAGCTACAGGCACACCCTGAAATGCTGAACCCTTCTGTTCCACTTTTTCGCCTGGAAGATACCGGTATGGGCGAGCAAATGCAGGAATATGCTGTCAGTCAGGTGCTGCATTGGTTTCGACGTTTTGACGATTATCGCATCCAGCAAAATAGTTCGCATTGGCAACCGCTGCCTGAATATCATCGGGAAGATTTTACCATCGGCATTTTGGGCGCAGGCGTACTGGGCAGTAAAGTTGCTCAGAGTCTGCAAACCTGGCGCTTTCCGCTGCGTTGCTGGAGTCGAACCCGTAAATCGTGGCCTGGCGTGCAAAGCTTTGCCGGACGGGAAGAACTGTCTGCATTTCTGAGCCAATGTCGGGTATTGATTAATTTGTTACCGAATACCCCTGAAACCGTCGGCATTATTAATCAACAATTACTCGAAAAATTACCGGATGGCGCGTATCTCCTCAACCTGGCGCGTGGTGTTCATGTTGTGGAAGATGACCTGCTCGCGGCGCTGGATAGCGGCAAAGTTAAAGGCGCAATGTTGGATGTTTTTAATCGTGAACCCTTACCGCCTGAAAGTCCGCTCTGGCAACATCCACGCGTGACGATAACACCACATGTCGCCGCGATTACCCGTCCCGCTGAAGCTGTGGAGTACATTTCTCGCACCATTGCCCAGCTCGAAAAAGGGGAGAGGGTCTGCGGGCAAGTCGACCGCGCACGCGGCTACTAA", + "dna_sequence_length": 939, + "functions": [ + "glyoxylate/hydroxypyruvate reductase A" + ], + "id": "CDS_1012", + "location": [ + [ + "NC_000913", + 1097886, + "+", + 939 + ] + ], + "md5": "6cdb13ce3879cf1d22f8213443ffe37e", + "parent_gene": "", + "protein_md5": "9ce746d7611832d309bb4dd16adfb71a", + "protein_translation": "MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003508" + ], + [ + "gene_synonym", + "ECK1020" + ], + [ + "gene_synonym", + "EcoGene:EG13870" + ], + [ + "gene_synonym", + "GI:16128997" + ], + [ + "gene_synonym", + "GeneID:948477" + ], + [ + "gene_synonym", + "JW1017" + ], + [ + "gene_synonym", + "NP_415552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75914" + ], + [ + "gene_synonym", + "b1034" + ], + [ + "gene_synonym", + "ycdX" + ] + ], + "dna_sequence": "ATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGACTGCAGCGGTAAAATGTTTGACTCGCTGGATCTAATTATTGCCGGTTTTCATGAGCCGGTTTTTGCGCCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCATATAATAAGCCATCCCGGAAATCCCAAATATGAAATAGATGTGAAAGCCGTTGCTGAAGCAGCCGCGAAACATCAGGTGGCGCTGGAAATCAATAATTCCTCATTTTTACACTCACGTAAGGGCAGTGAAGACAACTGTCGTGAGGTAGCCGCAGCGGTACGTGATGCTGGAGGTTGGGTGGCATTAGGCTCGGATTCTCACACCGCGTTTACCATGGGGGAATTTGAAGAGTGTCTTAAAATCCTCGACGCGGTAGATTTTCCGCCAGAGCGCATTTTGAATGTTTCTCCGCGCCGCTTACTGAACTTCCTTGAATCTCGCGGTATGGCACCGATTGCGGAATTTGCAGACCTTTAA", + "dna_sequence_length": 738, + "functions": [ + "alkaline phosphatase" + ], + "id": "CDS_1013", + "location": [ + [ + "NC_000913", + 1098879, + "+", + 738 + ] + ], + "md5": "1d2c0b520d6936dda1630161b51f5cfb", + "parent_gene": "", + "protein_md5": "bd3073b09524393ed6f41fb22eabd1e8", + "protein_translation": "MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIAEFADL", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003511" + ], + [ + "gene_synonym", + "ECK1021" + ], + [ + "gene_synonym", + "EcoGene:EG13871" + ], + [ + "gene_synonym", + "GI:16128998" + ], + [ + "gene_synonym", + "GeneID:945609" + ], + [ + "gene_synonym", + "JW1018" + ], + [ + "gene_synonym", + "NP_415553.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75915" + ], + [ + "gene_synonym", + "b1035" + ], + [ + "gene_synonym", + "ycdY" + ] + ], + "dna_sequence": "ATGAACGAGTTTTCTATCCTCTGTCGTGTGCTGGGTTCGCTCTATTACCGCCAACCACAAGATCCTTTACTGGTGCCGCTGTTTACCCTGATTCGTGAGGGGAAACTGGCTGCGAACTGGCCACTGGAGCAGGATGAGTTGCTGACACGTTTGCAGAAAAGCTGTGATATGACGCAAGTCTCTGCCGATTACAATGCGTTGTTTATCGGCGATGAATGTGCTGTGCCGCCATATCGTAGCGCATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAA", + "dna_sequence_length": 555, + "functions": [ + "redox enzyme maturation protein (REMP) chaperone for YcdX" + ], + "id": "CDS_1014", + "location": [ + [ + "NC_000913", + 1099640, + "+", + 555 + ] + ], + "md5": "bcdcfcfc8a0cda3178784c61f7375be2", + "parent_gene": "", + "protein_md5": "33ddad67eb91298cd65bde74be7d1547", + "protein_translation": "MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDELLTRLQKSCDMTQVSADYNALFIGDECAVPPYRSAWVEGATEAEVRAFLSERGMPLADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFWRTMAPLTRDAISAMWDELEEDSEE", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003514" + ], + [ + "gene_synonym", + "ECK1022" + ], + [ + "gene_synonym", + "EcoGene:EG13872" + ], + [ + "gene_synonym", + "GI:90111206" + ], + [ + "gene_synonym", + "GeneID:945617" + ], + [ + "gene_synonym", + "JW5147" + ], + [ + "gene_synonym", + "NP_415554.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75916" + ], + [ + "gene_synonym", + "b1036" + ], + [ + "gene_synonym", + "nupT" + ], + [ + "gene_synonym", + "ycdZ" + ] + ], + "dna_sequence": "ATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTGCAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTCATTATTTACGGTAGTGCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTCTGATGTGTATTCAGGCCAAACAGCTGCTGCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGA", + "dna_sequence_length": 492, + "functions": [ + "DUF1097 family inner membrane protein" + ], + "id": "CDS_1015", + "location": [ + [ + "NC_000913", + 1100296, + "+", + 492 + ] + ], + "md5": "372dc2178f9e9e9616499e32b8b12b93", + "parent_gene": "", + "protein_md5": "7a7d16eea61fcbb68b9d2e70f8da94c6", + "protein_translation": "MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003516" + ], + [ + "gene_synonym", + "ECK1023" + ], + [ + "gene_synonym", + "EcoGene:EG13413" + ], + [ + "gene_synonym", + "GI:16129000" + ], + [ + "gene_synonym", + "GeneID:945619" + ], + [ + "gene_synonym", + "JW1020" + ], + [ + "gene_synonym", + "NP_415555.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEA2" + ], + [ + "gene_synonym", + "agfG" + ], + [ + "gene_synonym", + "b1037" + ], + [ + "gene_synonym", + "csgG" + ] + ], + "dna_sequence": "ATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACCGCCCCGCCTAAAGAAGCCGCCAGACCGACATTAATGCCTCGTGCTCAGAGCTACAAAGATTTGACCCATCTGCCAGCGCCGACGGGTAAAATCTTTGTTTCGGTATACAACATTCAGGACGAAACCGGGCAATTTAAACCCTACCCGGCAAGTAACTTCTCCACTGCTGTTCCGCAAAGCGCCACGGCAATGCTGGTCACGGCACTGAAAGATTCTCGCTGGTTTATACCGCTGGAGCGCCAGGGCTTACAAAACCTGCTTAACGAGCGCAAGATTATTCGTGCGGCACAAGAAAACGGCACGGTTGCCATTAATAACCGAATCCCGCTGCAATCTTTAACGGCGGCAAATATCATGGTTGAAGGTTCGATTATCGGTTATGAAAGCAACGTCAAATCTGGCGGGGTTGGGGCAAGATATTTTGGCATCGGTGCCGACACGCAATACCAGCTCGATCAGATTGCCGTGAACCTGCGCGTCGTCAATGTGAGTACCGGCGAGATCCTTTCTTCGGTGAACACCAGTAAGACGATACTTTCCTATGAAGTTCAGGCCGGGGTTTTCCGCTTTATTGACTACCAGCGCTTGCTTGAAGGGGAAGTGGGTTACACCTCGAACGAACCTGTTATGCTGTGCCTGATGTCGGCTATCGAAACAGGGGTCATTTTCCTGATTAATGATGGTATCGACCGTGGTCTGTGGGATTTGCAAAATAAAGCAGAACGGCAGAATGACATTCTGGTGAAATACCGCCATATGTCGGTTCCACCGGAATCCTGA", + "dna_sequence_length": 834, + "functions": [ + "curli production assembly/transport outer membrane lipoprotein" + ], + "id": "CDS_1016", + "location": [ + [ + "NC_000913", + 1101684, + "-", + 834 + ] + ], + "md5": "bde2ccf4049fc90b3aeaefeaa3cb7887", + "parent_gene": "", + "protein_md5": "43f80aa9c42c08085b9e300c22e49970", + "protein_translation": "MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003519" + ], + [ + "gene_synonym", + "ECK1024" + ], + [ + "gene_synonym", + "EcoGene:EG13412" + ], + [ + "gene_synonym", + "GI:16129001" + ], + [ + "gene_synonym", + "GeneID:945622" + ], + [ + "gene_synonym", + "JW1021" + ], + [ + "gene_synonym", + "NP_415556.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE98" + ], + [ + "gene_synonym", + "agfF" + ], + [ + "gene_synonym", + "b1038" + ], + [ + "gene_synonym", + "csgF" + ] + ], + "dna_sequence": "ATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGCTGGAACCATGACTTTCCAGTTCCGTAATCCAAACTTTGGTGGTAACCCAAATAATGGCGCTTTTTTATTAAATAGCGCTCAGGCCCAAAACTCTTATAAAGATCCGAGCTATAACGATGACTTTGGTATTGAAACACCCTCAGCGTTAGATAACTTTACTCAGGCCATCCAGTCACAAATTTTAGGTGGGCTACTGTCGAATATTAATACCGGTAAACCGGGCCGCATGGTGACCAACGATTATATTGTCGATATTGCCAACCGCGATGGTCAATTGCAGTTGAACGTGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATAACTCAACCGATTTTTAA", + "dna_sequence_length": 417, + "functions": [ + "curli nucleation outer membrane protein" + ], + "id": "CDS_1017", + "location": [ + [ + "NC_000913", + 1102127, + "-", + 417 + ] + ], + "md5": "37b1ba45af5ca678cc6c61daa4b82610", + "parent_gene": "", + "protein_md5": "3cbfc0c9fbef801dfbd868b7db9901fa", + "protein_translation": "MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003528" + ], + [ + "gene_synonym", + "ECK1025" + ], + [ + "gene_synonym", + "EcoGene:EG13411" + ], + [ + "gene_synonym", + "GI:16129002" + ], + [ + "gene_synonym", + "GeneID:945711" + ], + [ + "gene_synonym", + "JW1022" + ], + [ + "gene_synonym", + "NP_415557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE95" + ], + [ + "gene_synonym", + "agfE" + ], + [ + "gene_synonym", + "b1039" + ], + [ + "gene_synonym", + "csgE" + ] + ], + "dna_sequence": "ATGAAACGTTATTTACGCTGGATTGTGGCGGCAGAATTTCTGTTCGCCGCAGGGAATCTTCACGCCGTTGAGGTAGAAGTCCCGGGATTGCTAACTGACCATACTGTTTCATCTATTGGCCATGATTTTTACCGAGCCTTTAGTGATAAATGGGAAAGTGACTATACGGGTAACTTAACGATTAATGAAAGGCCCAGTGCACGATGGGGAAGCTGGATCACTATAACGGTCAATCAGGACGTTATTTTCCAGACTTTTTTATTTCCGTTGAAAAGAGACTTCGAGAAAACTGTCGTCTTTGCACTGATTCAAACTGAAGAAGCACTAAATCGTCGCCAGATAAATCAGGCGTTATTAAGTACGGGCGATTTGGCGCATGATGAATTCTAA", + "dna_sequence_length": 390, + "functions": [ + "curlin secretion specificity factor" + ], + "id": "CDS_1018", + "location": [ + [ + "NC_000913", + 1102541, + "-", + 390 + ] + ], + "md5": "a24fb422531fda31bdebe4d96bf3b011", + "parent_gene": "", + "protein_md5": "81e30ecf38cdb07c6e8dcfc6d04c85a1", + "protein_translation": "MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003530" + ], + [ + "gene_synonym", + "ECK1026" + ], + [ + "gene_synonym", + "EcoGene:EG13410" + ], + [ + "gene_synonym", + "GI:16129003" + ], + [ + "gene_synonym", + "GeneID:949119" + ], + [ + "gene_synonym", + "JW1023" + ], + [ + "gene_synonym", + "NP_415558.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52106" + ], + [ + "gene_synonym", + "agfD" + ], + [ + "gene_synonym", + "b1040" + ], + [ + "gene_synonym", + "csgD" + ] + ], + "dna_sequence": "ATGTTTAATGAAGTCCATAGTATTCATGGTCATACATTATTGTTGATCACTAAATCTTCTTTGCAGGCGACAGCTCTCTTGCAGCACCTTAAACAATCGCTGGCAATTACAGGAAAATTACATAATATTCAACGTTCTCTGGACGATATCTCTTCAGGCTCTATTATTCTTCTGGATATGATGGAAGCGGATAAAAAGCTTATCCATTATTGGCAGGATACTTTGAGCAGGAAAAACAACAATATCAAAATATTGTTGCTAAATACGCCTGAAGATTACCCGTACCGCGACATTGAAAACTGGCCTCATATCAACGGCGTTTTTTATTCCATGGAGGATCAAGAACGTGTTGTCAATGGGTTGCAAGGCGTCCTGCGCGGCGAATGCTACTTTACGCAAAAGCTTGCCAGCTACCTGATTACGCATTCAGGTAACTATCGTTATAACAGCACGGAATCAGCCCTCCTTACTCATCGGGAAAAAGAGATCCTGAATAAGCTGCGTATCGGCGCGTCTAATAACGAGATCGCTCGTTCGTTGTTCATCAGCGAAAATACGGTTAAAACGCATCTTTATAATCTTTTCAAGAAGATAGCCGTAAAAAACCGGACACAAGCGGTTTCCTGGGCAAACGATAACCTCAGGCGATAA", + "dna_sequence_length": 651, + "functions": [ + "csgBAC operon transcriptional regulator" + ], + "id": "CDS_1019", + "location": [ + [ + "NC_000913", + 1103196, + "-", + 651 + ] + ], + "md5": "dd03e02d438ee67dd03990e457981f29", + "parent_gene": "", + "protein_md5": "5e25048121e1c8e85602a729b9dc269a", + "protein_translation": "MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003534" + ], + [ + "gene_synonym", + "ECK1027" + ], + [ + "gene_synonym", + "EcoGene:EG12621" + ], + [ + "gene_synonym", + "GI:16129004" + ], + [ + "gene_synonym", + "GeneID:947391" + ], + [ + "gene_synonym", + "JW1024" + ], + [ + "gene_synonym", + "NP_415559.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK7" + ], + [ + "gene_synonym", + "agfB" + ], + [ + "gene_synonym", + "b1041" + ], + [ + "gene_synonym", + "csgB" + ] + ], + "dna_sequence": "ATGAAAAACAAATTGTTATTTATGATGTTAACAATACTGGGTGCGCCTGGGATTGCAGCCGCAGCAGGTTATGATTTAGCTAATTCAGAATATAACTTCGCGGTAAATGAATTGAGTAAGTCTTCATTTAATCAGGCAGCCATAATTGGTCAAGCTGGGACTAATAATAGTGCTCAGTTACGGCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGACAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCTTATGGTAATACTGCGATGATTATCCAGAAAGGTTCTGGTAATAAAGCAAATATTACACAGTATGGTACTCAAAAAACGGCAATTGTAGTGCAGAGACAGTCGCAAATGGCTATTCGCGTGACACAACGTTAA", + "dna_sequence_length": 456, + "functions": [ + "curlin nucleator protein, minor subunit in curli complex" + ], + "id": "CDS_1020", + "location": [ + [ + "NC_000913", + 1103951, + "+", + 456 + ] + ], + "md5": "f83a8abd56dcb40772b1e3c9354c1535", + "parent_gene": "", + "protein_md5": "ff868b3e5174eae1e4b69f228cbb012e", + "protein_translation": "MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003537" + ], + [ + "gene_synonym", + "ECK1028" + ], + [ + "gene_synonym", + "EcoGene:EG11489" + ], + [ + "gene_synonym", + "GI:16129005" + ], + [ + "gene_synonym", + "GeneID:949055" + ], + [ + "gene_synonym", + "JW1025" + ], + [ + "gene_synonym", + "NP_415560.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28307" + ], + [ + "gene_synonym", + "agfA" + ], + [ + "gene_synonym", + "b1042" + ], + [ + "gene_synonym", + "csgA" + ] + ], + "dna_sequence": "ATGAAACTTTTAAAAGTAGCAGCAATTGCAGCAATCGTATTCTCCGGTAGCGCTCTGGCAGGTGTTGTTCCTCAGTACGGCGGCGGCGGTAACCACGGTGGTGGCGGTAATAATAGCGGCCCAAATTCTGAGCTGAACATTTACCAGTACGGTGGCGGTAACTCTGCACTTGCTCTGCAAACTGATGCCCGTAACTCTGACTTGACTATTACCCAGCATGGCGGCGGTAATGGTGCAGATGTTGGTCAGGGCTCAGATGACAGCTCAATCGATCTGACCCAACGTGGCTTCGGTAACAGCGCTACTCTTGATCAGTGGAACGGCAAAAATTCTGAAATGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAA", + "dna_sequence_length": 456, + "functions": [ + "curlin subunit, amyloid curli fibers, cryptic" + ], + "id": "CDS_1021", + "location": [ + [ + "NC_000913", + 1104447, + "+", + 456 + ] + ], + "md5": "bdcab4457524dced35d9b910fa07979f", + "parent_gene": "", + "protein_md5": "6104f627c19aca2b8622e0d66701df0a", + "protein_translation": "MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSELNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003542" + ], + [ + "gene_synonym", + "ECK1029" + ], + [ + "gene_synonym", + "EcoGene:EG13414" + ], + [ + "gene_synonym", + "GI:16129006" + ], + [ + "gene_synonym", + "GeneID:945623" + ], + [ + "gene_synonym", + "JW1026" + ], + [ + "gene_synonym", + "NP_415561.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52107" + ], + [ + "gene_synonym", + "agfC" + ], + [ + "gene_synonym", + "b1043" + ], + [ + "gene_synonym", + "csgC" + ], + [ + "gene_synonym", + "ycdE" + ] + ], + "dna_sequence": "ATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAGTACAAATATTGTCCCTGCGCGAAGGCAGTTCAGGGCAAAGTCAGACGAAGCAAGAAAAGACCCTTTCATTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAA", + "dna_sequence_length": 333, + "functions": [ + "curli assembly protein" + ], + "id": "CDS_1022", + "location": [ + [ + "NC_000913", + 1104961, + "+", + 333 + ] + ], + "md5": "16291501b372bf8d383dad42d7dc9483", + "parent_gene": "", + "protein_md5": "44dc230543a37dd5c81a67cabbeaf14d", + "protein_translation": "MNTLLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPPSSEKS", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003545" + ], + [ + "gene_synonym", + "ECK1030" + ], + [ + "gene_synonym", + "EcoGene:EG13873" + ], + [ + "gene_synonym", + "GI:16129007" + ], + [ + "gene_synonym", + "GeneID:949012" + ], + [ + "gene_synonym", + "JW1031" + ], + [ + "gene_synonym", + "NP_415562.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75917" + ], + [ + "gene_synonym", + "b1044" + ], + [ + "gene_synonym", + "ymdA" + ] + ], + "dna_sequence": "ATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAA", + "dna_sequence_length": 312, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1023", + "location": [ + [ + "NC_000913", + 1105414, + "+", + 312 + ] + ], + "md5": "cc0e063d79dbe627a2e552f4473e7da1", + "parent_gene": "", + "protein_md5": "4c55a0ca84124625217f39e96d5a0652", + "protein_translation": "MFRPFLNSLMLGSLFFPFIAIAGSTVQGGVIHFYGQIVEPACDVSTQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003549" + ], + [ + "gene_synonym", + "ECK1031" + ], + [ + "gene_synonym", + "EcoGene:EG13874" + ], + [ + "gene_synonym", + "GI:16129008" + ], + [ + "gene_synonym", + "GeneID:946987" + ], + [ + "gene_synonym", + "JW1032" + ], + [ + "gene_synonym", + "NP_415563.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8D6" + ], + [ + "gene_synonym", + "b1045" + ], + [ + "gene_synonym", + "ymdB" + ] + ], + "dna_sequence": "ATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCACACCGTCGGGCCAGTCTGGCGTGGTGGTGAACAAAACGAAGACCAGCTTTTGCAGGATGCCTATCTCAATAGCCTACGACTGGTGGCGGCAAACAGCTATACGTCAGTGGCTTTTCCTGCAATCAGTACTGGGGTTTATGGTTACCCTCGTGCGGCAGCGGCTGAAATCGCAGTAAAAACCGTTTCAGAATTTATTACCCGTCACGCTTTACCCGAACAGGTATACTTTGTCTGTTATGATGAAGAAAACGCCCACCTCTACGAAAGACTCCTTACCCAACAAGGAGATGAATGA", + "dna_sequence_length": 534, + "functions": [ + "O-acetyl-ADP-ribose deacetylase", + "RNase III inhibitor during cold shock", + "putative cardiolipin synthase C regulatory subunit" + ], + "id": "CDS_1024", + "location": [ + [ + "NC_000913", + 1105820, + "+", + 534 + ] + ], + "md5": "3521b21f47fc3df15290b437f1d69e4b", + "parent_gene": "", + "protein_md5": "564233cc09f9d1c7cf9967ffcf8472f6", + "protein_translation": "MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYERLLTQQGDE", + "protein_translation_length": 177, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003551" + ], + [ + "gene_synonym", + "ECK1032" + ], + [ + "gene_synonym", + "EcoGene:EG13875" + ], + [ + "gene_synonym", + "GI:90111207" + ], + [ + "gene_synonym", + "GeneID:947321" + ], + [ + "gene_synonym", + "JW5150" + ], + [ + "gene_synonym", + "NP_415564.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75919" + ], + [ + "gene_synonym", + "b1046" + ], + [ + "gene_synonym", + "clsC" + ], + [ + "gene_synonym", + "ymdC" + ] + ], + "dna_sequence": "TTGCCCCGGCTGGCGAGCGCGGTGCTGCCACTGTGTTCGCAACATCCCGGTCAGTGTGGCCTTTTTCCTCTGGAGAAAAGTCTGGATGCGTTTGCCGCCCGGTATCGTCTGGCCGAAATGGCAGAGCATACGCTCGATGTTCAGTATTACATCTGGCAGGACGATATGTCGGGTCGGTTACTGTTTTCCGCCCTGTTAGCCGCAGCAAAGCGTGGCGTTCGCGTCCGTTTGTTGCTGGACGACAACAATACGCCCGGACTTGACGACATTTTACGCTTGCTTGACAGTCATCCACGCATTGAAGTCCGGCTTTTTAATCCTTTCTCGTTTCGCTTGCTGCGTCCGCTTGGTTATATCACCGACTTTTCCCGTCTTAATCGCCGTATGCACAATAAAAGTTTCACTGTCGATGGCGTGGTGACCCTGGTGGGAGGACGAAATATTGGTGATGCCTATTTTGGAGCAGGGGAGGAGCCACTTTTTTCGGATTTAGATGTCATGGCAATAGGACCCGTGGTAGAGGACGTTGCCGATGATTTCGCCCGCTACTGGTATTGCAAATCGGTTTCACCCTTACAGCAGGTGCTGGATGTCCCGGAGGGTGAAATGGCGGATCGCATCGAGTTACCCGCCTCCTGGCATAACGATGCCATGACGCATCGTTATTTACGCAAAATGGAATCCAGTCCATTTATAAATCATCTGGTTGATGGAACATTGCCGCTTATCTGGGCGAAGACACGTTTATTAAGTGATGATCCGGCGAAAGGGGAGGGCAAGGCAAAACGGCATTCACTGTTACCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTAACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTACACGATCGCGGCATAACCGGTAATTCCGGAGCCAGCCTGCATGCTAAAACCTTTAGCATCGATGGTAAAACGGTGTTTATCGGCTCTTTCAATTTCGATCCGCGTTCAACATTGCTCAATACTGAAATGGGCTTCGTGATAGAGAGCGAAACGCTGGCACAGTTAATTGATAAACGCTTTATTCAGAGCCAGTATGATGCGGCCTGGCAGCTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAA", + "dna_sequence_length": 1422, + "functions": [ + "stationary phase cardiolipin synthase 3" + ], + "id": "CDS_1025", + "location": [ + [ + "NC_000913", + 1106355, + "+", + 1422 + ] + ], + "md5": "b857e9d712574f69612166d510511320", + "parent_gene": "", + "protein_md5": "10ca6ea9e7f37dc8409c1f1db00a049b", + "protein_translation": "MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHNDAMTHRYLRKMESSPFINHLVDGTLPLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKTFSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDRWGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL", + "protein_translation_length": 473, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003553" + ], + [ + "gene_synonym", + "ECK1033" + ], + [ + "gene_synonym", + "EcoGene:EG13876" + ], + [ + "gene_synonym", + "GI:16129010" + ], + [ + "gene_synonym", + "GeneID:946944" + ], + [ + "gene_synonym", + "JW1034" + ], + [ + "gene_synonym", + "NP_415565.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75920" + ], + [ + "gene_synonym", + "b1047" + ], + [ + "gene_synonym", + "mdoC" + ], + [ + "gene_synonym", + "opgC" + ], + [ + "gene_synonym", + "ymdD" + ] + ], + "dna_sequence": "ATGAACCCAGTACCCGCGCAACGTGAATATTTCCTCGACTCCATCCGCGCCTGGCTGATGTTGTTAGGGATACCTTTTCATATTTCTTTAATCTATTCGAGCCATACATGGCATGTGAATAGCGCCGAATCATCATTGTGGCTGACCCTTTTTAATGACTTCATCCACTCGTTCCGCATGCAGGTATTTTTCGTTATATCCGGCTACTTTTCCTACATGCTTTTTTTACGCTATCCCTTGAAAAAATGGTGGAAAGTACGTGTCGAACGTGTAGGTATCCCGATGTTAACAGCCATCCCCCTACTGACATTACCGCAATTTATTATGCTGCAATATGTCAAAGGAAAAGCGGAAAGTTGGCCTGGGCTGTCATTGTATGACAAATATAATACGTTGGCCTGGGAATTAATATCACACCTGTGGTTTTTACTGGTGTTAGTGGTCATGACGACGCTGTGCGTATGGATATTTAAGCGCATCAGAAATAATTTAGAAAATTCTGATAAAACGAATAAAAAATTCTCGATGGTAAAACTATCGGTGATTTTTTTATGCCTCGGCATCGGTTATGCGGTAATAAGAAGAACGATTTTTATTGTGTATCCGCCCATTCTGAGTAATGGCATGTTCAATTTTATTGTCATGCAAACGCTGTTTTATTTGCCGTTCTTTATCCTCGGCGCACTGGCTTTCATTTTCCCTCATCTTAAAGCCTTGTTTACCACGCCGTCTCGTGGCTGTACCCTTGCAGCAGCATTGGCGTTTGTCGCTTATTTACTCAACCAGCGCTATGGCAGTGGCGATGCCTGGATGTACGAAACCGAGTCGGTGATCACCATGGTCCTCGGTCTGTGGATGGTGAATGTGGTCTTCTCCTTTGGCCACCGTTTGCTTAACTTCCAGTCAGCGCGGGTGACTTATTTTGTTAACGCATCGCTGTTTATCTATCTGGTTCACCACCCGTTAACGCTGTTTTTCGGCGCATACATTACACCGCACATCACCTCCAACTGGCTTGGTTTTCTCTGTGGCCTGATATTTGTAGTAGGGATTGCGATAATTCTGTATGAAATTCATTTGCGCATCCCGTTACTGAAGTTTTTGTTCTCTGGTAAACCGGTTGTTAAGCGTGAGAACGATAAAGCACCAGCCCGTTAA", + "dna_sequence_length": 1158, + "functions": [ + "OPG biosynthetic transmembrane succinyltransferase" + ], + "id": "CDS_1026", + "location": [ + [ + "NC_000913", + 1108941, + "-", + 1158 + ] + ], + "md5": "c0e2552ecd407ba78d2ff2d8ca0e73d7", + "parent_gene": "", + "protein_md5": "9c4970a407bfa883aec2c648e782e773", + "protein_translation": "MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAESSLWLTLFNDFIHSFRMQVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRIRNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTLFYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETESVITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHITSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003558" + ], + [ + "gene_synonym", + "ECK1034" + ], + [ + "gene_synonym", + "EcoGene:EG11885" + ], + [ + "gene_synonym", + "GI:16129011" + ], + [ + "gene_synonym", + "GeneID:945005" + ], + [ + "gene_synonym", + "JW1035" + ], + [ + "gene_synonym", + "NP_415566.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33136" + ], + [ + "gene_synonym", + "b1048" + ], + [ + "gene_synonym", + "mdoA" + ], + [ + "gene_synonym", + "mdoG" + ], + [ + "gene_synonym", + "opgG" + ] + ], + "dna_sequence": "ATGATGAAAATGCGTTGGTTGAGTGCTGCAGTAATGTTAACCCTGTATACATCTTCAAGCTGGGCTTTCAGTATTGATGATGTCGCAAAGCAAGCTCAATCTTTAGCCGGGAAAGGCTACGAGACGCCCAAAAGCAACTTGCCCTCCGTTTTCCGCGATATGAAATACGCGGACTATCAGCAGATCCAGTTTAATCATGACAAAGCGTACTGGAACAATCTGAAGACCCCATTCAAACTCGAGTTCTACCATCAGGGTATGTACTTCGATACCCCGGTCAAAATAAATGAAGTGACTGCCACCGCAGTCAAACGAATCAAATACAGCCCGGATTATTTCACTTTCGGCGATGTTCAGCATGACAAAGATACGGTAAAAGACCTTGGCTTTGCCGGTTTTAAAGTGCTTTACCCGATCAACAGCAAAGATAAAAACGATGAAATCGTCAGCATGCTCGGGGCCAGCTATTTCCGCGTGATTGGTGCAGGTCAGGTTTATGGCCTTTCTGCCCGCGGCCTGGCAATTGATACCGCCTTGCCATCGGGTGAAGAATTTCCGCGCTTCAAAGAGTTCTGGATCGAGCGTCCAAAACCGACTGATAAACGTTTAACCATCTATGCATTGCTTGACTCGCCGCGTGCGACAGGTGCTTACAAATTCGTGGTTATGCCAGGGCGTGACACGGTTGTGGATGTGCAGTCGAAAATCTATCTGCGCGATAAAGTCGGCAAACTGGGGGTTGCACCGTTAACCAGTATGTTCCTGTTTGGGCCGAACCAACCGTCGCCTGCAAATAACTATCGTCCGGAGTTGCACGACTCTAACGGTCTCTCTATCCATGCCGGTAATGGCGAATGGATCTGGCGTCCGTTGAATAACCCGAAACATTTAGCGGTCAGCAGCTTCTCCATGGAAAACCCGCAAGGCTTTGGTCTGTTGCAGCGCGGTCGTGATTTCTCCCGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTGGACGCCGGATCAGCTGCCGGAGCCGGGTAAAGAGATGAACTTTAAATACACCATCACCTTCAGCCGTGATGAAGACAAACTGCATGCGCCAGATAACGCATGGGTGCAACAAACGCGTCGTTCAACGGGGGATGTGAAGCAGTCGAACCTGATTCGCCAGCCTGACGGTACTATCGCCTTTGTGGTCGATTTTACCGGCGCAGAGATGAAAAAACTGCCAGAGGATACCCCGGTCACAGCGCAAACCAGCATTGGTGATAATGGTGAGATAGTTGAAAGCACGGTGCGCTATAACCCGGTTACCAAAGGCTGGCGTCTGGTGATGCGTGTGAAAGTGAAAGATGCCAAGAAAACCACTGAAATGCGTGCTGCGCTGGTGAATGCCGATCAGACGTTGAGTGAAACCTGGAGCTACCAGTTACCTGCCAATGAATAA", + "dna_sequence_length": 1536, + "functions": [ + "OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase" + ], + "id": "CDS_1027", + "location": [ + [ + "NC_000913", + 1109335, + "+", + 1536 + ] + ], + "md5": "7b1f2211ee57c8fcc3b9f08ec4e12fc3", + "parent_gene": "", + "protein_md5": "5c3518d48a4b5d79352a29fbe0fa98b6", + "protein_translation": "MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYETPKSNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQSKIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE", + "protein_translation_length": 511, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003560" + ], + [ + "gene_synonym", + "ECK1035" + ], + [ + "gene_synonym", + "EcoGene:EG11886" + ], + [ + "gene_synonym", + "GI:16129012" + ], + [ + "gene_synonym", + "GeneID:945624" + ], + [ + "gene_synonym", + "JW1037" + ], + [ + "gene_synonym", + "NP_415567.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62517" + ], + [ + "gene_synonym", + "b1049" + ], + [ + "gene_synonym", + "mdoA" + ], + [ + "gene_synonym", + "mdoH" + ], + [ + "gene_synonym", + "opgH" + ] + ], + "dna_sequence": "ATGAATAAGACAACTGAGTACATTGACGCAATGCCCATCGCCGCAAGCGAGAAAGCGGCATTGCCGAAGACTGATATCCGCGCCGTTCATCAGGCGCTGGATGCCGAACACCGCACCTGGGCGCGGGAGGATGATTCCCCGCAAGGCTCGGTAAAGGCGCGTCTGGAACAAGCCTGGCCAGATTCACTTGCTGATGGACAGTTAATTAAAGACGACGAAGGGCGCGATCAGCTGAAGGCGATGCCAGAAGCAAAACGCTCCTCGATGTTTCCCGACCCGTGGCGTACCAACCCGGTAGGCCGTTTCTGGGATCGCCTGCGTGGACGCGATGTCACGCCGCGCTATCTGGCTCGTTTGACCAAAGAAGAGCAGGAGAGCGAGCAAAAGTGGCGTACCGTCGGTACCATCCGCCGTTACATTCTGTTGATCCTGACGCTCGCGCAAACTGTCGTCGCGACCTGGTATATGAAGACCATTCTTCCTTATCAGGGTTGGGCGCTGATTAATCCTATGGATATGGTTGGTCAGGATTTGTGGGTTTCCTTTATGCAGCTTCTGCCTTATATGCTGCAAACCGGTATCCTGATCCTCTTTGCGGTACTGTTCTGTTGGGTGTCCGCCGGATTCTGGACGGCGTTAATGGGCTTCCTGCAACTGCTTATTGGTCGCGATAAATACAGTATATCTGCGTCAACAGTTGGCGATGAACCATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAACACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATCGCCGCCGCCGTCGCCGCGTGAAGCGTAAAAGCGGTAATATCGATGACTTCTGCCGTCGCTGGGGCAGCCAGTACAGCTACATGGTGGTGCTGGATGCTGACTCGGTAATGACCGGTGATTGTTTGTGCGGGCTGGTGCGCCTGATGGAAGCCAACCCGAACGCCGGGATCATTCAGTCGTCGCCGAAAGCGTCCGGTATGGATACGCTGTATGCGCGCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGCGAAGGTTCCTTTGCCGGTTCAATCCTGTCACATGACTTCGTGGAAGCGGCGTTGATGCGCCGTGCAGGTTGGGGGGTCTGGATTGCTTACGATCTCCCGGGTTCTTATGAAGAATTGCCGCCTAACTTGCTTGATGAGCTAAAACGTGACCGCCGATGGTGCCACGGTAACCTGATGAACTTCCGTCTGTTCCTGGTGAAGGGTATGCACCCGGTTCACCGTGCGGTGTTCCTGACGGGCGTGATGTCTTATCTCTCCGCTCCGCTGTGGTTTATGTTCCTCGCGCTCTCTACTGCATTGCAGGTAGTGCATGCGTTGACCGAACCGCAATACTTCCTGCAACCACGGCAGTTGTTCCCAGTGTGGCCGCAGTGGCGTCCTGAGCTGGCGATTGCACTTTTTGCTTCGACCATGGTGCTGTTGTTCCTGCCGAAGTTATTGAGCATTTTGCTTATCTGGTGCAAAGGAACGAAAGAATACGGCGGCTTCTGGCGCGTTACATTATCGTTGCTGCTGGAAGTGCTTTTTTCCGTGCTGCTGGCTCCGGTACGCATGCTGTTCCATACGGTCTTCGTTGTCAGCGCGTTCCTTGGCTGGGAAGTGGTGTGGAATTCACCGCAGCGTGATGATGACTCCACTTCCTGGGGTGAAGCGTTCAAACGCCACGGCTCACAGCTGCTGTTAGGGTTAGTGTGGGCTGTTGGGATGGCGTGGCTGGATCTGCGTTTCCTGTTCTGGCTGGCACCGATTGTCTTCTCGTTGATCCTGTCACCGTTTGTTTCGGTGATTTCCAGCCGTGCCACCGTTGGTCTGCGCACCAAACGCTGGAAACTGTTCCTGATCCCGGAAGAGTATTCGCCGCCGCAGGTGCTGGTTGATACCGATCGGTTCCTTGAGATGAATCGTCAACGCTCCCTTGATGATGGCTTTATGCACGCAGTGTTTAACCCGTCATTTAACGCTCTGGCAACCGCAATGGCGACCGCGCGTCACCGCGCCAGTAAGGTGCTGGAAATCGCCCGTGACCGCCACGTTGAACAGGCGCTGAACGAGACGCCAGAGAAGCTGAATCGCGATCGTCGCCTGGTGCTGCTAAGCGATCCGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAA", + "dna_sequence_length": 2544, + "functions": [ + "OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase", + "nutrient-dependent cell size regulator, FtsZ assembly antagonist" + ], + "id": "CDS_1028", + "location": [ + [ + "NC_000913", + 1110863, + "+", + 2544 + ] + ], + "md5": "4eb80b9cf3663d58fca2dc17eeb3ea03", + "parent_gene": "", + "protein_md5": "47528fe39cf0e25a71a2c6cae0e1ba55", + "protein_translation": "MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ", + "protein_translation_length": 847, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003565" + ], + [ + "gene_synonym", + "ECK1036" + ], + [ + "gene_synonym", + "EcoGene:EG12689" + ], + [ + "gene_synonym", + "GI:16129013" + ], + [ + "gene_synonym", + "GeneID:945613" + ], + [ + "gene_synonym", + "JW5151" + ], + [ + "gene_synonym", + "NP_415568.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB31" + ], + [ + "gene_synonym", + "b1050" + ], + [ + "gene_synonym", + "yceK" + ] + ], + "dna_sequence": "ATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGGTGTGCAATGGGATGTGCGTGACTCCGCCTGGCGTTATGTCACGATCCTTGATCTGCCATTCTCTCTGGTTTTTGATACTTTACTGCTGCCGATCGACATTCATCATGGCCCGTATGAGTGA", + "dna_sequence_length": 228, + "functions": [ + "outer membrane integrity lipoprotein" + ], + "id": "CDS_1029", + "location": [ + [ + "NC_000913", + 1113579, + "+", + 228 + ] + ], + "md5": "75d2b90ee6dd386a6756d8e0051fcdf1", + "parent_gene": "", + "protein_md5": "27f676681a6362b462ec3b4fcb0ed417", + "protein_translation": "MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003567" + ], + [ + "gene_synonym", + "ECK1037" + ], + [ + "gene_synonym", + "EcoGene:EG11338" + ], + [ + "gene_synonym", + "GI:90111208" + ], + [ + "gene_synonym", + "GeneID:945612" + ], + [ + "gene_synonym", + "JW1039" + ], + [ + "gene_synonym", + "NP_415569.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25738" + ], + [ + "gene_synonym", + "b1051" + ], + [ + "gene_synonym", + "msyB" + ] + ], + "dna_sequence": "ATGACCATGTACGCAACGCTTGAAGAAGCCATTGACGCTGCACGCGAAGAATTTCTTGCAGACAACCCCGGCATCGACGCCGAAGATGCGAATGTGCAACAGTTCAATGCCCAAAAATACGTTTTGCAGGACGGCGACATCATGTGGCAAGTTGAGTTTTTTGCCGACGAAGGGGAAGAAGGTGAATGTTTACCTATGCTTAGCGGTGAAGCCGCGCAAAGTGTTTTTGATGGCGACTATGATGAGATAGAGATACGCCAGGAGTGGCAGGAAGAGAATACATTACATGAATGGGACGAGGGGGAATTTCAGCTTGAGCCACCGCTGGATACCGAGGAAGGACGCGCAGCAGCTGATGAGTGGGATGAACGTTAA", + "dna_sequence_length": 375, + "functions": [ + "multicopy suppressor of secY and secA" + ], + "id": "CDS_1030", + "location": [ + [ + "NC_000913", + 1114181, + "-", + 375 + ] + ], + "md5": "7c9c22e211a91d6a8c8ae68e0e8eeb9f", + "parent_gene": "", + "protein_md5": "d9e18784e818e532bdf30ea5ef71f2fa", + "protein_translation": "MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADEWDER", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003572" + ], + [ + "gene_synonym", + "ECK1038" + ], + [ + "gene_synonym", + "EcoGene:EG11343" + ], + [ + "gene_synonym", + "GI:16129016" + ], + [ + "gene_synonym", + "GeneID:945627" + ], + [ + "gene_synonym", + "JW1040" + ], + [ + "gene_synonym", + "NP_415571.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25744" + ], + [ + "gene_synonym", + "b1053" + ], + [ + "gene_synonym", + "mdtG" + ], + [ + "gene_synonym", + "yceE" + ] + ], + "dna_sequence": "ATGTCACCCTGTGAAAATGACACCCCTATAAACTGGAAACGAAACCTGATCGTCGCCTGGCTAGGCTGTTTTCTTACCGGTGCCGCCTTCAGTCTGGTAATGCCCTTCTTACCCCTCTACGTTGAGCAGCTTGGCGTTACCGGTCACTCCGCCCTGAATATGTGGTCCGGTATTGTCTTCAGCATTACATTTTTATTTTCGGCCATCGCCTCACCGTTTTGGGGTGGACTCGCCGACCGTAAAGGCCGAAAACTCATGCTATTACGCTCTGCCCTCGGCATGGGCATCGTGATGGTGTTGATGGGGCTGGCACAAAATATCTGGCAGTTTTTGATCCTGCGGGCGCTTCTTGGGTTACTTGGCGGATTTGTCCCCAACGCTAATGCTCTTATCGCCACACAAGTACCGCGTAATAAAAGCGGCTGGGCGCTGGGTACGCTCTCCACAGGCGGCGTTAGTGGTGCGTTGCTCGGCCCAATGGCTGGCGGCCTGCTCGCCGATAGCTACGGCTTACGTCCGGTATTCTTTATTACCGCCAGTGTGCTCATACTCTGCTTTTTCGTCACCCTGTTTTGCATCAGAGAAAAATTCCAGCCGGTCAGCAAAAAAGAGATGCTGCACATGCGGGAAGTGGTGACATCACTTAAAAACCCGAAACTGGTACTCAGCCTGTTTGTCACTACGTTAATCATCCAGGTGGCGACGGGCTCAATTGCCCCCATTCTGACGCTGTATGTCCGCGAACTGGCGGGTAACGTCAGTAACGTCGCCTTTATCAGTGGCATGATCGCCTCGGTGCCAGGCGTGGCGGCTCTGCTAAGTGCACCACGACTCGGCAAACTTGGCGATCGAATCGGACCCGAAAAGATCCTGATTACAGCGCTGATCTTTTCTGTACTGCTGTTGATCCCAATGTCTTACGTTCAGACGCCATTGCAACTTGGGATTTTACGTTTTTTGCTCGGTGCCGCCGATGGTGCACTACTCCCCGCCGTACAGACACTGTTGGTTTACAACTCGAGCAACCAGATCGCCGGGCGTATCTTCAGCTATAACCAATCGTTTCGTGATATTGGCAACGTTACCGGACCATTGATGGGAGCAGCGATTTCAGCGAACTACGGTTTCAGAGCGGTATTTCTCGTCACCGCTGGCGTAGTGTTATTCAACGCAGTCTATTCATGGAACAGTCTACGTCGTCGTCGAATACCCCAGGTATCGAACTGA", + "dna_sequence_length": 1227, + "functions": [ + "putative drug efflux system protein" + ], + "id": "CDS_1031", + "location": [ + [ + "NC_000913", + 1115490, + "-", + 1227 + ] + ], + "md5": "aac906b7ba2810d1ea0e373bb9f2c0bf", + "parent_gene": "", + "protein_md5": "941f877beffd9bc430aa3e946905e822", + "protein_translation": "MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQVSN", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003574" + ], + [ + "gene_synonym", + "ECK1039" + ], + [ + "gene_synonym", + "EcoGene:EG10464" + ], + [ + "gene_synonym", + "GI:16129017" + ], + [ + "gene_synonym", + "GeneID:946216" + ], + [ + "gene_synonym", + "JW1041" + ], + [ + "gene_synonym", + "NP_415572.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV0" + ], + [ + "gene_synonym", + "b1054" + ], + [ + "gene_synonym", + "htrB" + ], + [ + "gene_synonym", + "lpxL" + ], + [ + "gene_synonym", + "waaM" + ] + ], + "dna_sequence": "ATGACGAATCTACCCAAGTTCTCCACCGCACTGCTTCATCCGCGTTATTGGTTAACCTGGTTGGGTATTGGCGTACTTTGGTTAGTCGTGCAATTGCCCTACCCGGTTATCTACCGCCTCGGTTGTGGATTAGGAAAACTGGCGTTACGTTTTATGAAACGACGCGCAAAAATTGTGCATCGCAACCTGGAACTGTGCTTCCCGGAAATGAGCGAACAAGAACGCCGTAAAATGGTGGTGAAGAATTTCGAATCCGTTGGCATGGGCCTGATGGAAACCGGCATGGCGTGGTTCTGGCCGGACCGCCGAATCGCCCGCTGGACGGAAGTGATCGGCATGGAACACATTCGTGACGTGCAGGCGCAAAAACGCGGCATCCTGTTAGTTGGCATCCATTTTCTGACACTGGAGCTGGGTGCGCGGCAGTTTGGTATGCAGGAACCGGGTATTGGCGTTTATCGCCCGAACGATAATCCACTGATTGACTGGCTACAAACCTGGGGCCGTTTGCGCTCAAATAAATCGATGCTCGACCGCAAAGATTTAAAAGGCATGATTAAAGCCCTGAAAAAAGGCGAAGTGGTCTGGTACGCACCGGATCATGATTACGGCCCGCGCTCAAGCGTTTTCGTCCCGTTGTTTGCCGTTGAGCAGGCTGCGACCACGACCGGAACCTGGATGCTGGCACGGATGTCCGGCGCATGTCTGGTGCCCTTCGTTCCACGCCGTAAGCCAGATGGCAAAGGGTATCAATTGATTATGCTGCCGCCAGAGTGTTCTCCGCCACTGGATGATGCCGAAACTACCGCCGCGTGGATGAACAAAGTGGTCGAAAAATGCATCATGATGGCACCAGAGCAGTATATGTGGTTACACCGTCGCTTTAAAACACGCCCGGAAGGCGTTCCTTCACGCTATTAA", + "dna_sequence_length": 921, + "functions": [ + "lauryl-acyl carrier protein (ACP)-dependent acyltransferase" + ], + "id": "CDS_1032", + "location": [ + [ + "NC_000913", + 1116582, + "-", + 921 + ] + ], + "md5": "2c9c7ffe1f607cbf3f7ed45d16eb99ef", + "parent_gene": "", + "protein_md5": "6c599b7fb76e732c980913832a93871c", + "protein_translation": "MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003581" + ], + [ + "gene_synonym", + "ECK1040" + ], + [ + "gene_synonym", + "EcoGene:EG11116" + ], + [ + "gene_synonym", + "GI:16129018" + ], + [ + "gene_synonym", + "GeneID:945601" + ], + [ + "gene_synonym", + "JW1042" + ], + [ + "gene_synonym", + "NP_415573.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24188" + ], + [ + "gene_synonym", + "b1055" + ], + [ + "gene_synonym", + "yceA" + ] + ], + "dna_sequence": "ATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTTATATCAGCTGTTTACCGCGCTGAATGTTTTTGGGCGAGTGTATCTGGCGCATGAGGGCATTAACGCGCAAATCAGCGTACCTGCGAGCAATGTTGAAACATTTCGCGCGCAGCTCTATGCCTTCGACCCGGCTTTAGAGGGTTTACGCCTGAATATCGCGTTGGATGATGACGGGAAATCCTTCTGGGTACTGCGCATGAAGGTACGCGATCGCATTGTTGCCGACGGTATTGACGATCCTCACTTTGATGCCAGCAATGTTGGTGAGTATCTGCAAGCGGCGGAAGTGAACGCCATGCTTGACGATCCCGATGCACTATTTATCGACATGCGTAACCACTATGAGTATGAAGTGGGGCACTTTGAAAACGCGCTCGAAATTCCGGCAGATACCTTCCGTGAGCAGCTGCCAAAAGCAGTCGAGATGATGCAGGCACATAAAGATAAAAAAATCGTCATGTACTGCACCGGCGGCATTCGTTGTGAAAAGGCCAGTGCCTGGATGAAACATAACGGATTCAACAAAGTCTGGCATATCGAGGGCGGAATTATTGAATACGCCCGTAAGGCGCGCGAGCAGGGCTTGCCGGTGCGTTTTATTGGCAAAAATTTTGTTTTTGACGAGCGGATGGGCGAACGTATATCGGATGAGATTATCGCGCATTGCCACCAGTGCGGCGCGCCGTGCGACAGCCATACCAACTGTAAAAATGATGGCTGCCACCTGCTGTTTATTCAGTGTCCAGTATGCGCGGAAAAATACAAAGGTTGTTGTAGTGAGATTTGCTGCGAAGAAAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAA", + "dna_sequence_length": 1053, + "functions": [ + "putative rhodanese-related sulfurtransferase" + ], + "id": "CDS_1033", + "location": [ + [ + "NC_000913", + 1116807, + "+", + 1053 + ] + ], + "md5": "8d3a8025df1a8f6d160befab0ff1b7b3", + "parent_gene": "", + "protein_md5": "3dd5ca176a8335918527f6e49d32cbc8", + "protein_translation": "MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003583" + ], + [ + "gene_synonym", + "ECK1041" + ], + [ + "gene_synonym", + "EcoGene:EG11820" + ], + [ + "gene_synonym", + "GI:16129019" + ], + [ + "gene_synonym", + "GeneID:946145" + ], + [ + "gene_synonym", + "JW1043" + ], + [ + "gene_synonym", + "NP_415574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8X2" + ], + [ + "gene_synonym", + "b1056" + ], + [ + "gene_synonym", + "yceI" + ] + ], + "dna_sequence": "ATGAAAAAAAGCCTGCTTGGTTTAACCTTCGCGTCCCTGATGTTCTCTGCCGGTTCAGCGGTTGCCGCCGATTACAAAATTGACAAAGAAGGTCAGCACGCCTTTGTTAATTTCCGCATCCAGCACCTTGGCTATAGCTGGTTATACGGCACCTTTAAAGATTTCGACGGTACTTTTACCTTTGACGAAAAAAATCCGGCTGCCGATAAAGTGAATGTGACAATTAACACCACCAGCGTCGATACTAATCACGCCGAACGCGATAAACATCTTCGCAGTGCAGATTTCCTCAATACCGCAAAATATCCACAGGCAACATTCACCTCCACCAGCGTGAAGAAAGACGGTGACGAACTGGATATTACCGGCGATCTGACGCTGAATGGCGTAACCAAACCCGTCACGCTGGAAGCGAAATTAATTGGTCAGGGCGACGACCCATGGGGTGGTAAACGTGCAGGCTTCGAGGCCGAAGGCAAAATTAAGCTCAAGGACTTCAATATCAAGACAGATTTAGGTCCAGCTTCTCAGGAAGTGGATCTGATTATTTCAGTGGAAGGCGTACAGCAGAAGTAA", + "dna_sequence_length": 576, + "functions": [ + "periplasmic high pH-inducible lipid-binding protein" + ], + "id": "CDS_1034", + "location": [ + [ + "NC_000913", + 1118476, + "-", + 576 + ] + ], + "md5": "49d761d1459036dfd7366793d31c0f98", + "parent_gene": "", + "protein_md5": "153a143fd6ce37de98555a376599e43c", + "protein_translation": "MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003585" + ], + [ + "gene_synonym", + "ECK1042" + ], + [ + "gene_synonym", + "EcoGene:EG12659" + ], + [ + "gene_synonym", + "GI:16129020" + ], + [ + "gene_synonym", + "GeneID:945628" + ], + [ + "gene_synonym", + "JW1044" + ], + [ + "gene_synonym", + "NP_415575.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75925" + ], + [ + "gene_synonym", + "b1057" + ], + [ + "gene_synonym", + "yceJ" + ] + ], + "dna_sequence": "ATGTCATTCACAAATACCCCTGAACGCTATGGTGTTATATCTGCGGCCTTCCATTGGCTAAGCGCAATTATTGTCTACGGCATGTTTGCTTTAGGTCTGTGGATGGTCACGCTCAGTTATTACGATGGCTGGTATCACAAAGCACCCGAACTGCATAAAAGCATCGGTATTTTGTTAATGATGGGGCTGGTTATTCGCGTTCTGTGGCGTGTCATATCTCCACCGCCGGGTCCGCTGCCGAGTTATTCGCCCATGACTCGTCTTGCCGCAAGAGCTGGACATCTCGCATTGTACCTATTGCTTTTCGCCATCGGCATCAGCGGCTATCTGATCTCAACTGCCGATGGTAAACCGATCAGCGTTTTTGGCTGGTTTGACGTCCCCGCGACCCTTGCCGACGCTGGCGCACAGGCAGACTTTGCCGGTGCCCTGCATTTTTGGCTCGCGTGGAGCGTCGTAGTACTGTCCGTTATGCACGGATTTATGGCCCTGAAGCATCATTTCATCGATAAAGACGACACTCTGAAGCGCATGCTGGGAAAGTCGTCATCTGACTATGGAGTATAA", + "dna_sequence_length": 567, + "functions": [ + "putative cytochrome b561" + ], + "id": "CDS_1035", + "location": [ + [ + "NC_000913", + 1119046, + "-", + 567 + ] + ], + "md5": "8b1fea2b2e6835caa51cf62500511f43", + "parent_gene": "", + "protein_md5": "f8d868a51a76ba3ac3148a3ac2d976a3", + "protein_translation": "MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003588" + ], + [ + "gene_synonym", + "ECK1043" + ], + [ + "gene_synonym", + "EcoGene:EG14334" + ], + [ + "gene_synonym", + "GI:16129021" + ], + [ + "gene_synonym", + "GeneID:945629" + ], + [ + "gene_synonym", + "JW1045" + ], + [ + "gene_synonym", + "NP_415576.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64442" + ], + [ + "gene_synonym", + "b1058" + ], + [ + "gene_synonym", + "yceO" + ] + ], + "dna_sequence": "ATGAGGCCGTTTTTACAGGAGTATTTAATGCGTCGGCTGTTGCACTATCTCATCAATAATATTCGCGAGCATCTGATGCTTTATCTTTTTCTCTGGGGATTGTTGGCAATTATGGATCTGATCTATGTGTTTTATTTTTAG", + "dna_sequence_length": 141, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1036", + "location": [ + [ + "NC_000913", + 1119447, + "-", + 141 + ] + ], + "md5": "be8279a23b0d4860a5faafa196bdcae9", + "parent_gene": "", + "protein_md5": "e8a7f3a1191b80e840fc13ba4a5b87ef", + "protein_translation": "MRPFLQEYLMRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003590" + ], + [ + "gene_synonym", + "ECK1044" + ], + [ + "gene_synonym", + "EcoGene:EG12669" + ], + [ + "gene_synonym", + "GI:16129022" + ], + [ + "gene_synonym", + "GeneID:944983" + ], + [ + "gene_synonym", + "JW1046" + ], + [ + "gene_synonym", + "NP_415577.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40874" + ], + [ + "gene_synonym", + "b1059" + ], + [ + "gene_synonym", + "solA" + ] + ], + "dna_sequence": "ATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCCGCCGGGTATTATGCAACCCGCGCCGGTTTAAACGTGCTAATGACCGACGCCCATATGCCACCGCATCAACACGGCAGCCACCACGGCGATACGCGATTAATTCGCCATGCTTATGGTGAAGGCGAAAAGTATGTCCCGCTGGTCCTCCGCGCGCAAACGCTGTGGGATGAACTCTCCCGCCACAACGAAGAAGATCCCATTTTTGTACGCTCTGGCGTCATTAACCTTGGCCCGGCTGATTCCACATTTCTCGCCAACGTCGCCCACAGCGCCGAACAATGGCAACTCAACGTTGAAAAGCTCGATGCGCAAGGGATTATGGCCCGCTGGCCGGAAATACGCGTCCCGGACAACTACATCGGCTTATTTGAAACTGATTCCGGTTTTTTGCGCAGCGAACTGGCGATTAAAACCTGGATCCAACTGGCGAAGGAAGCGGGCTGTGCGCAACTGTTCAACTGCCCGGTCACCGCAATTCGTCATGACGATGATGGCGTAACTATTGAAACGGCTGACGGTGAGTATCAGGCGAAAAAAGCGATTGTCTGCGCGGGAACATGGGTAAAAGACCTGCTCCCGGAGCTGCCTGTCCAGCCCGTACGCAAAGTATTTGCCTGGTATCAGGCCGATGGCCGCTATAGCGTGAAGAATAAATTCCCGGCGTTTACCGGTGAACTGCCCAATGGCGATCAATATTATGGTTTTCCGGCAGAAAACGACGCGTTGAAGATTGGCAAACATAACGGAGGCCAGGTTATCCATTCAGCGGATGAACGTGTTCCGTTTGCGGAAGTGGCCAGTGATGGGTCAGAAGCCTTCCCGTTCTTGCGCAATGTATTGCCGGGTATCGGTTGCTGCCTGTACGGCGCTGCCTGCACCTATGATAATTCGCCTGACGAAGATTTTATTATCGATACCCTACCCGGCCACGATAATACACTGCTCATTACCGGCCTGAGTGGGCACGGTTTTAAATTTGCGTCAGTTTTAGGGGAAATAGCTGCCGATTTTGCGCAAGACAAAAAAAGCGATTTTGATTTGACGCCATTCAGGCTTTCCCGCTTCCAATAA", + "dna_sequence_length": 1119, + "functions": [ + "N-methyltryptophan oxidase, FAD-binding" + ], + "id": "CDS_1037", + "location": [ + [ + "NC_000913", + 1120586, + "-", + 1119 + ] + ], + "md5": "6bfdab3ff3a26867a4ca6f97d2b4ad8c", + "parent_gene": "", + "protein_md5": "d582a80cecd408bcc08972bddd0d1e70", + "protein_translation": "MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEEDPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003594" + ], + [ + "gene_synonym", + "ECK1045" + ], + [ + "gene_synonym", + "EcoGene:EG14335" + ], + [ + "gene_synonym", + "GI:49176074" + ], + [ + "gene_synonym", + "GeneID:946104" + ], + [ + "gene_synonym", + "JW5152" + ], + [ + "gene_synonym", + "NP_415578.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB33" + ], + [ + "gene_synonym", + "b1060" + ], + [ + "gene_synonym", + "bssS" + ], + [ + "gene_synonym", + "yceP" + ] + ], + "dna_sequence": "ATGGAAAAAAATAATGAAGTCATTCAGACTCATCCGCTCGTAGGGTGGGACATCAGCACCGTTGATAGCTATGATGCGCTGATGTTGCGTTTGCACTACCAGACCCCAAATAAGTCCGAGCAGGAAGGGACTGAAGTTGGTCAGACGCTCTGGTTAACCACTGATGTTGCCAGACAATTTATTTCGATATTAGAAGCAGGAATCGCCAAAATTGAATCCGGTGATTTCCAGGTAAACGAGTATCGGCGTCATTAA", + "dna_sequence_length": 255, + "functions": [ + "biofilm regulator" + ], + "id": "CDS_1038", + "location": [ + [ + "NC_000913", + 1120955, + "-", + 255 + ] + ], + "md5": "2d59f856f97ad19a4db0c054acfd3e29", + "parent_gene": "", + "protein_md5": "5af841e045682f26b4c0ce5b97d1f90f", + "protein_translation": "MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGTEVGQTLWLTTDVARQFISILEAGIAKIESGDFQVNEYRRH", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003599" + ], + [ + "gene_synonym", + "ECK1046" + ], + [ + "gene_synonym", + "EcoGene:EG12670" + ], + [ + "gene_synonym", + "GI:16129024" + ], + [ + "gene_synonym", + "GeneID:945022" + ], + [ + "gene_synonym", + "JW1048" + ], + [ + "gene_synonym", + "NP_415579.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABR1" + ], + [ + "gene_synonym", + "b1061" + ], + [ + "gene_synonym", + "dinI" + ] + ], + "dna_sequence": "ATGCGAATTGAAGTCACCATAGCGAAAACTTCTCCATTGCCAGCTGGGGCTATTGACGCCCTGGCTGGCGAACTTTCCCGCCGTATTCAGTATGCGTTTCCTGATAATGAAGGCCACGTATCGGTACGTTATGCCGCAGCGAATAATTTATCGGTTATTGGCGCGACAAAAGAAGATAAACAGCGCATTAGTGAAATTCTCCAGGAAACGTGGGAAAGCGCCGATGACTGGTTTGTCAGCGAATAA", + "dna_sequence_length": 246, + "functions": [ + "DNA damage-inducible protein I" + ], + "id": "CDS_1039", + "location": [ + [ + "NC_000913", + 1121487, + "-", + 246 + ] + ], + "md5": "e64bfa39bbc7ca3f67cf3c4fca57d974", + "parent_gene": "", + "protein_md5": "46aeaec8f464c962863c5da2c65b296e", + "protein_translation": "MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQETWESADDWFVSE", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003607" + ], + [ + "gene_synonym", + "ECK1047" + ], + [ + "gene_synonym", + "EcoGene:EG10806" + ], + [ + "gene_synonym", + "GI:16129025" + ], + [ + "gene_synonym", + "GeneID:945787" + ], + [ + "gene_synonym", + "JW1049" + ], + [ + "gene_synonym", + "NP_415580.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05020" + ], + [ + "gene_synonym", + "b1062" + ], + [ + "gene_synonym", + "pyrC" + ] + ], + "dna_sequence": "ATGACTGCACCATCCCAGGTATTAAAGATCCGCCGCCCAGACGACTGGCACCTTCACCTCCGCGATGGCGACATGTTAAAAACTGTCGTGCCATATACCAGCGAAATTTATGGACGGGCTATCGTAATGCCCAATCTGGCTCCGCCCGTGACCACCGTTGAGGCTGCCGTGGCGTATCGCCAGCGTATTCTTGACGCCGTACCTGCCGGGCACGATTTCACCCCATTGATGACCTGTTATTTAACAGATTCGCTGGATCCTAATGAGCTGGAGCGCGGATTTAACGAAGGCGTGTTCACCGCTGCAAAACTTTACCCGGCAAACGCAACCACTAACTCCAGCCACGGCGTGACGTCAATTGACGCAATCATGCCGGTACTTGAGCGCATGGAAAAAATCGGTATGCCGCTACTGGTGCATGGTGAAGTGACACATGCAGATATCGACATTTTTGATCGTGAAGCGCGCTTTATAGAAAGCGTGATGGAACCTCTGCGCCAGCGCCTGACTGCGCTGAAAGTCGTTTTTGAGCACATCACCACCAAAGATGCTGCCGACTATGTCCGTGACGGAAATGAACGGCTGGCTGCCACCATCACTCCGCAGCATCTGATGTTTAACCGCAACCATATGCTGGTTGGAGGCGTGCGTCCGCACCTGTATTGTCTACCCATCCTCAAACGTAATATTCACCAACAGGCATTGCGTGAACTGGTCGCCAGCGGTTTTAATCGAGTATTCCTCGGTACGGATTCTGCGCCACATGCACGTCATCGCAAAGAGAGCAGTTGCGGCTGCGCGGGCTGCTTCAACGCCCCAACCGCGCTGGGCAGTTACGCTACCGTCTTTGAAGAAATGAATGCTTTGCAGCACTTTGAAGCATTCTGTTCTGTAAACGGCCCGCAGTTCTATGGGTTGCCGGTCAACGACACATTCATCGAACTGGTACGTGAAGAGCAACAGGTTGCTGAAAGCATCGCACTGACTGATGACACGCTGGTGCCATTCCTCGCCGGGGAAACGGTACGCTGGTCCGTTAAACAATAA", + "dna_sequence_length": 1047, + "functions": [ + "dihydro-orotase" + ], + "id": "CDS_1040", + "location": [ + [ + "NC_000913", + 1122607, + "-", + 1047 + ] + ], + "md5": "08edfac430f2166db312951869507cd5", + "parent_gene": "", + "protein_md5": "7747d65c098a664bc683352e8734b7c0", + "protein_translation": "MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETVRWSVKQ", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003611" + ], + [ + "gene_synonym", + "ECK1048" + ], + [ + "gene_synonym", + "EcoGene:EG11117" + ], + [ + "gene_synonym", + "GI:16129026" + ], + [ + "gene_synonym", + "GeneID:947377" + ], + [ + "gene_synonym", + "JW1050" + ], + [ + "gene_synonym", + "NP_415581.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB26" + ], + [ + "gene_synonym", + "b1063" + ], + [ + "gene_synonym", + "yceB" + ] + ], + "dna_sequence": "ATGAACAAGTTTTTATTTGCCGCTGCATTGATCGTCAGTGGCCTGCTCGTTGGCTGTAATCAACTCACCCAATACACCATCACCGAACAAGAAATTAACCAGTCGCTTGCGAAACATAATAATTTCTCAAAAGATATCGGTTTACCCGGCGTGGCTGACGCCCATATTGTTCTGACAAACCTGACCAGCCAAATTGGTCGCGAAGAGCCGAATAAGGTTACCCTAACCGGAGACGCCAATCTGGACATGAACTCCCTGTTCGGTAGTCAGAAAGCGACCATGAAACTGAAGCTGAAAGCGCTGCCCGTGTTTGATAAAGAAAAAGGTGCGATCTTCCTGAAAGAGATGGAAGTGGTCGATGCGACGGTACAACCGGAAAAAATGCAAACGGTGATGCAAACGTTGCTTCCCTATTTGAACCAGGCATTACGCAATTACTTTAACCAGCAACCTGCTTACGTCCTGCGCGAAGATGGCAGCCAGGGCGAAGCAATGGCGAAAAAACTGGCGAAAGGCATTGAAGTGAAGCCAGGCGAAATTGTCATTCCATTTACTGATTAA", + "dna_sequence_length": 561, + "functions": [ + "lipoprotein, DUF1439 family" + ], + "id": "CDS_1041", + "location": [ + [ + "NC_000913", + 1123273, + "-", + 561 + ] + ], + "md5": "efae2122617160dedc22185fc034069e", + "parent_gene": "", + "protein_md5": "6f259138602043a6e267b4c0031e2b2e", + "protein_translation": "MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEIVIPFTD", + "protein_translation_length": 186, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003615" + ], + [ + "gene_synonym", + "ECK1049" + ], + [ + "gene_synonym", + "EcoGene:EG12688" + ], + [ + "gene_synonym", + "GI:16129027" + ], + [ + "gene_synonym", + "GeneID:946926" + ], + [ + "gene_synonym", + "JW1051" + ], + [ + "gene_synonym", + "NP_415582.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC59" + ], + [ + "gene_synonym", + "b1064" + ], + [ + "gene_synonym", + "grxB" + ] + ], + "dna_sequence": "GTGAAGCTATACATTTACGATCACTGCCCTTACTGCCTCAAAGCCCGCATGATTTTCGGCCTGAAAAATATCCCCGTCGAATTACATGTTCTGCTCAACGACGACGCAGAAACACCCACCCGGATGGTCGGTCAAAAACAGGTTCCCATTCTGCAAAAAGATGACAGCCGCTATATGCCAGAAAGCATGGACATCGTTCACTATGTCGATAAACTCGACGGCAAACCGTTACTGACCGGCAAACGTTCCCCTGCCATTGAAGAGTGGCTGCGCAAGGTCAATGGCTACGCCAACAAACTGCTGTTGCCGCGTTTTGCCAAATCGGCATTTGATGAGTTTTCTACTCCCGCCGCGCGCAAATATTTCGTCGACAAGAAAGAGGCCAGCGCGGGTAATTTTGCCGACCTGCTGGCCCACTCTGACGGTCTGATTAAGAATATCAGCGATGATTTACGTGCGCTGGACAAACTGATCGTCAAACCGAACGCCGTGAATGGCGAACTTTCGGAAGATGATATTCAGCTATTCCCGCTACTGCGTAATCTGACGCTGGTAGCCGGAATTAACTGGCCAAGCCGCGTTGCTGATTACCGCGATAATATGGCGAAACAGACACAAATCAATTTGTTATCATCAATGGCGATTTAA", + "dna_sequence_length": 648, + "functions": [ + "glutaredoxin 2 (Grx2)" + ], + "id": "CDS_1042", + "location": [ + [ + "NC_000913", + 1124054, + "-", + 648 + ] + ], + "md5": "4383288f87b0d8eba923be2a1b6b3278", + "parent_gene": "", + "protein_md5": "ff86e71c2da27e32c3da8fa5fc4342ad", + "protein_translation": "MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003618" + ], + [ + "gene_synonym", + "ECK1050" + ], + [ + "gene_synonym", + "EcoGene:EG13878" + ], + [ + "gene_synonym", + "GI:90111209" + ], + [ + "gene_synonym", + "GeneID:946920" + ], + [ + "gene_synonym", + "JW1052" + ], + [ + "gene_synonym", + "NP_415583.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69367" + ], + [ + "gene_synonym", + "b1065" + ], + [ + "gene_synonym", + "mdtH" + ], + [ + "gene_synonym", + "yceL" + ] + ], + "dna_sequence": "ATGTCCCGCGTGTCGCAGGCGAGGAACCTGGGTAAATATTTCCTGCTCATCGATAATATGCTGGTCGTGCTGGGGTTCTTTGTTGTCTTCCCGCTGATCTCTATCCGCTTCGTTGATCAAATGGGCTGGGCCGCCGTCATGGTCGGTATTGCTCTCGGTCTACGCCAATTTATTCAGCAAGGTCTGGGTATTTTCGGCGGTGCAATTGCCGACCGCTTTGGTGCCAAACCGATGATTGTTACCGGTATGCTGATGCGCGCCGCCGGATTCGCCACAATGGGTATCGCCCACGAACCGTGGCTATTGTGGTTTTCATGCCTGCTCTCGGGACTCGGTGGCACGTTGTTTGATCCGCCGCGTTCGGCGCTGGTGGTGAAATTAATCCGTCCACAGCAGCGTGGTCGTTTTTTCTCGCTGTTGATGATGCAGGACAGTGCCGGTGCGGTCATTGGCGCATTGTTGGGGAGCTGGCTGTTGCAATACGACTTTCGCCTGGTCTGCGCCACAGGGGCAGTTCTATTTGTGCTATGTGCGGCGTTCAATGCGTGGTTGTTACCAGCATGGAAACTCTCCACCGTACGCACGCCCGTTCGCGAAGGCATGACCCGCGTGATGCGTGACAAGCGTTTTGTCACCTATGTTCTGACGCTGGCGGGTTACTACATGCTGGCTGTACAAGTGATGCTGATGCTGCCAATTATGGTCAACGACGTGGCTGGCGCGCCCTCTGCCGTTAAATGGATGTATGCCATTGAAGCGTGTCTGTCGTTAACGTTGCTCTACCCTATCGCCCGCTGGAGTGAAAAGCATTTTCGTCTGGAACACCGGTTGATGGCTGGGCTGTTGATAATGTCATTAAGCATGATGCCGGTGGGCATGGTCAGCGGCCTGCAACAACTTTTCACCCTGATTTGTCTGTTTTATATCGGGTCGATCATTGCCGAGCCTGCGCGTGAAACCTTAAGTGCTTCGCTGGCGGACGCAAGAGCTCGCGGCAGCTATATGGGGTTTAGCCGTCTGGGTCTGGCGATTGGCGGCGCTATTGGTTATATCGGTGGCGGCTGGCTGTTTGACCTGGGCAAATCGGCGCACCAGCCAGAGCTTCCGTGGATGATGCTGGGCATTATTGGCATCTTCACTTTCCTTGCGCTGGGTTGGCAGTTTAGCCAGAAACGCGCCGCGCGTCGTTTGCTTGAACGCGACGCCTGA", + "dna_sequence_length": 1209, + "functions": [ + "multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin" + ], + "id": "CDS_1043", + "location": [ + [ + "NC_000913", + 1125326, + "-", + 1209 + ] + ], + "md5": "f0eae2bff8ac2ce3175b0286eb2b775c", + "parent_gene": "", + "protein_md5": "77cdabfde36385fd29abaf433e9fab34", + "protein_translation": "MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAARRLLERDA", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003622" + ], + [ + "gene_synonym", + "ECK1051" + ], + [ + "gene_synonym", + "EcoGene:EG10851" + ], + [ + "gene_synonym", + "GI:16129029" + ], + [ + "gene_synonym", + "GeneID:946910" + ], + [ + "gene_synonym", + "JW1053" + ], + [ + "gene_synonym", + "NP_415584.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A948" + ], + [ + "gene_synonym", + "b1066" + ], + [ + "gene_synonym", + "rimJ" + ], + [ + "gene_synonym", + "tcp" + ] + ], + "dna_sequence": "ATGTTTGGCTATCGCAGTAACGTGCCAAAAGTGCGCTTAACCACAGACCGACTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGGCTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCGTTGCCAATTTTTCCAATGTTGTTCGTGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGACTCATGTTTGAAGCCCTGACCGCAGCCATTCGTTATATGCAGCGCACCCAACATATTCATCGCATTATGGCTAATTATATGCCGCACAATAAACGCAGCGGTGATTTACTGGCGCGACTGGGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAA", + "dna_sequence_length": 585, + "functions": [ + "ribosomal-protein-S5-alanine N-acetyltransferase" + ], + "id": "CDS_1044", + "location": [ + [ + "NC_000913", + 1125562, + "+", + 585 + ] + ], + "md5": "2aab0e95d7b0a67cb99315772ebe375d", + "parent_gene": "", + "protein_md5": "868dc8d0c82e8d87ca65ae7849b70bb2", + "protein_translation": "MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003625" + ], + [ + "gene_synonym", + "ECK1052" + ], + [ + "gene_synonym", + "EcoGene:EG11537" + ], + [ + "gene_synonym", + "GI:16129030" + ], + [ + "gene_synonym", + "GeneID:945633" + ], + [ + "gene_synonym", + "JW1054" + ], + [ + "gene_synonym", + "NP_415585.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29217" + ], + [ + "gene_synonym", + "b1067" + ], + [ + "gene_synonym", + "yceH" + ] + ], + "dna_sequence": "ATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACCACGCCGGAGCAATACCCGCTCTCAGTCAATGGTGTAGTCACGGCCTGTAATCAGAAAACGAACCGTGAACCGGTCATGAATCTGAGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTTAATCACCACGTTGTTATTGCGTGGTGCCCAGACGCCAGGTGAACTGCGCAGCCGCGCCGCGCGAATGTATGAATTCAGCGATATGGCGGAAGTGGAGTCGACGCTGGAACAACTGGCAAATCGCGAAGATGGTCCTTTTGTGGTGCGTCTGGCCCGCGAACCGGGTAAACGCGAAAACCGCTACATGCATCTTTTCAGTGGTGAGGTTGAAGATCAGCCGGCGGTGACGGATATGTCGAACGCGGTTGACGGTGATTTACAGGCCCGCGTCGAAGCCCTGGAAATCGAAGTGGCAGAACTGAAACAGCGTCTTGATTCGTTGCTGGCCCATCTGGGAGATTAA", + "dna_sequence_length": 648, + "functions": [ + "UPF0502 family protein" + ], + "id": "CDS_1045", + "location": [ + [ + "NC_000913", + 1126157, + "+", + 648 + ] + ], + "md5": "636f4ad0b6ebacd4109e136aa0d45dc9", + "parent_gene": "", + "protein_md5": "633709293862f3c6a04f8b8faf23d245", + "protein_translation": "MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003627" + ], + [ + "gene_synonym", + "ECK1053" + ], + [ + "gene_synonym", + "EcoGene:EG13879" + ], + [ + "gene_synonym", + "GI:16129031" + ], + [ + "gene_synonym", + "GeneID:945204" + ], + [ + "gene_synonym", + "JW1055" + ], + [ + "gene_synonym", + "NP_415586.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75931" + ], + [ + "gene_synonym", + "b1068" + ], + [ + "gene_synonym", + "mviM" + ], + [ + "gene_synonym", + "mviS" + ], + [ + "gene_synonym", + "yceM" + ] + ], + "dna_sequence": "GTGAAAAAATTACGTATCGGCGTAGTGGGATTAGGTGGCATTGCGCAAAAAGCGTGGTTACCGGTGCTGGCGGCAGCGTCTGACTGGACGTTACAAGGAGCCTGGTCGCCTACGCGCGCGAAAGCCCTGCCAATTTGTGAAAGCTGGCGCATTCCTTATGCCGATTCGTTATCCAGCCTTGCCGCCAGTTGCGATGCGGTTTTTGTGCATTCCAGCACCGCCAGCCACTTTGACGTGGTCAGTACGTTACTCAATGCGGGGGTACATGTCTGTGTCGATAAACCGCTGGCAGAAAATCTGCGCGATGCTGAACGGCTGGTGGAACTGGCGGCGCGGAAAAAACTGACGTTGATGGTCGGTTTTAACCGTCGTTTCGCACCACTCTACGGTGAGTTAAAAACGCAACTCGCCACCGCAGCCTCGCTAAGAATGGATAAACATCGTAGCAATAGCGTCGGGCCACACGATCTTTATTTCACGTTGCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAGCGTGAAACCGTGCAGGCCGTGACTGACGGTGCGCTCATCGACATTACGGATATGCGCGAATGGCGTGAGGAGCGCGGGCAGGGCGTAGTGCATAAACCGATTCCTGGTTGGCAGAGTACGCTTGAGCAACGTGGGTTTGTCGGCTGTGCGCGGCACTTCATTGAATGTGTGCAAAACCAGACAGTTCCGCAAACCGCCGGCGAACAGGCCGTGCTGGCGCAACGTATCGTTGACAAGATCTGGCGCGATGCGATGAGTGAATAA", + "dna_sequence_length": 924, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1046", + "location": [ + [ + "NC_000913", + 1126806, + "+", + 924 + ] + ], + "md5": "990892653a765c80615a072a3523cdda", + "parent_gene": "", + "protein_md5": "46e2689037ee8573b24e8d48069efef3", + "protein_translation": "MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFTLLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAGSQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIECVQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003630" + ], + [ + "gene_synonym", + "ECK1054" + ], + [ + "gene_synonym", + "EcoGene:EG13880" + ], + [ + "gene_synonym", + "GI:16129032" + ], + [ + "gene_synonym", + "GeneID:945487" + ], + [ + "gene_synonym", + "JW1056" + ], + [ + "gene_synonym", + "NP_415587.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF16" + ], + [ + "gene_synonym", + "b1069" + ], + [ + "gene_synonym", + "murJ" + ], + [ + "gene_synonym", + "mviN" + ], + [ + "gene_synonym", + "mviS" + ], + [ + "gene_synonym", + "yceN" + ] + ], + "dna_sequence": "ATGAATTTATTAAAATCGCTGGCCGCCGTCAGCTCGATGACCATGTTTTCGCGTGTGCTTGGCTTCGCACGAGACGCAATTGTCGCCAGAATCTTTGGCGCAGGGATGGCAACCGACGCCTTTTTCGTCGCTTTTAAACTTCCTAACTTGTTACGCCGTATCTTTGCCGAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGATCATGGTGACCGCGCCAGGCTTCGCTGACACAGCTGACAAATTTGCCCTGACCAGCCAGCTACTAAAGATTACCTTTCCCTATATCTTGCTGATCTCCCTGGCGTCGCTGGTGGGAGCGATTCTGAATACGTGGAACCGCTTCTCGATTCCGGCGTTTGCTCCAACACTGCTTAACATCAGCATGATTGGTTTCGCGCTGTTTGCCGCACCGTACTTTAACCCACCGGTGCTGGCGCTGGCGTGGGCTGTTACGGTCGGCGGCGTCCTGCAGCTGGTGTATCAGCTACCGCACCTGAAGAAGATCGGCATGCTGGTCCTGCCGCGCATTAACTTCCACGATGCCGGAGCAATGCGCGTGGTGAAACAGATGGGACCGGCGATCCTTGGCGTCTCTGTGAGCCAGATCTCCTTAATCATCAACACCATTTTTGCCTCGTTTCTTGCTTCCGGTTCGGTGTCTTGGATGTATTACGCCGACCGCTTAATGGAGTTTCCGTCCGGTGTGCTGGGCGTGGCGCTTGGCACCATTTTGCTGCCGTCGCTGTCGAAAAGTTTTGCCAGTGGCAATCATGATGAATACAACCGTTTGATGGACTGGGGGTTGCGTCTTTGTTTCCTGTTGGCGCTGCCGAGTGCGGTTGCGTTGGGCATTCTTTCCGGTCCGTTGACCGTTTCGCTGTTCCAGTACGGTAAATTTACCGCGTTTGATGCGCTGATGACCCAGCGGGCGTTAATTGCCTACTCGGTGGGTTTGATTGGCCTGATTGTAGTGAAAGTGTTGGCTCCTGGCTTTTATTCCCGCCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCCGTTGAAACATGCCGGGCTGTCACTTTCTATTGGTCTGGCGGCGTGTCTGAATGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATCTTTACCCCGCAACCCGGCTGGATGGCGTTTCTGTTGCGTCTGGTGGTGGCGGTACTGGTGATGTCTGGCGTGCTTTTAGGTATGTTACATATCATGCCGGAGTGGTCATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAA", + "dna_sequence_length": 1536, + "functions": [ + "putative lipid II flippase" + ], + "id": "CDS_1047", + "location": [ + [ + "NC_000913", + 1127839, + "+", + 1536 + ] + ], + "md5": "31c18c83f5ec4b7f8341d0c1e7a4df63", + "parent_gene": "", + "protein_md5": "30a2e7ab99ac77723ce65658e8e06c01", + "protein_translation": "MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFARRTV", + "protein_translation_length": 511, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003632" + ], + [ + "gene_synonym", + "ECK1055" + ], + [ + "gene_synonym", + "EcoGene:EG12665" + ], + [ + "gene_synonym", + "GI:16129033" + ], + [ + "gene_synonym", + "GeneID:945634" + ], + [ + "gene_synonym", + "JW1057" + ], + [ + "gene_synonym", + "NP_415588.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43533" + ], + [ + "gene_synonym", + "b1070" + ], + [ + "gene_synonym", + "flgN" + ] + ], + "dna_sequence": "ATGACACGTCTTGCAGAGATCCTCGACCAGATGTCCGCTGTGCTTAACGATCTCAAAACGGTAATGGATCAAGAGCAGCAACATCTCTCTATGGGGCAGATCAACGGCAGCCAGTTGCAATGGATTACAGAACAAAAAAGCTCACTGCTGGCGACGCTGGATTACCTCGAACAGTTACGCAGGAAAGAACCCAATACAGCAAATAGCGTTGATATTAGTCAACGCTGGCAGGAAATTACTGTGAAAACGCAGCAACTACGCCAAATGAATCAACATAACGGCTGGTTACTGGAAGGACAGATTGAGCGCAATCAACAGGCGCTGGAAATGTTGAAACCGCATCAGGAACCGACGCTATATGGGGCGAACGGTCAGACCTCAACAACCCATCGCGGCGGTAAAAAGATTTCGATCTGA", + "dna_sequence_length": 417, + "functions": [ + "export chaperone for FlgK and FlgL" + ], + "id": "CDS_1048", + "location": [ + [ + "NC_000913", + 1129830, + "-", + 417 + ] + ], + "md5": "6dee993b8abd6ebfb3dfbe1fba5c5ca1", + "parent_gene": "", + "protein_md5": "3ef9c0c48a0d3fc5b259b914cd6bf04d", + "protein_translation": "MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003634" + ], + [ + "gene_synonym", + "ECK1056" + ], + [ + "gene_synonym", + "EcoGene:EG12664" + ], + [ + "gene_synonym", + "GI:16129034" + ], + [ + "gene_synonym", + "GeneID:946684" + ], + [ + "gene_synonym", + "JW1058" + ], + [ + "gene_synonym", + "NP_415589.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM4" + ], + [ + "gene_synonym", + "b1071" + ], + [ + "gene_synonym", + "flgM" + ], + [ + "gene_synonym", + "mviS" + ] + ], + "dna_sequence": "ATGAGTATTGATCGCACTTCGCCTCTGAAGCCTGTAAGCACCGTTCAACCGCGCGAAACCACTGACGCGCCGGTAACGAACAGCCGGGCGGCAAAAACAACCGCCTCCACCAGCACCAGTGTGACGTTAAGCGACGCGCAAGCAAAACTGATGCAACCCGGCAGCAGTGATATCAATCTTGAACGTGTCGAAGCGTTAAAACTGGCGATTCGTAACGGTGAACTAAAAATGGACACCGGCAAAATTGCCGATGCGCTGATCAACGAAGCGCAGCAAGACTTGCAGAGTAACTGA", + "dna_sequence_length": 294, + "functions": [ + "anti-sigma factor for FliA (sigma 28)" + ], + "id": "CDS_1049", + "location": [ + [ + "NC_000913", + 1130128, + "-", + 294 + ] + ], + "md5": "ca2fca44ccba078e031f1b9ad84b6d5e", + "parent_gene": "", + "protein_md5": "a02cc5ce5986d9f93702d587a076bf74", + "protein_translation": "MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003637" + ], + [ + "gene_synonym", + "ECK1057" + ], + [ + "gene_synonym", + "EcoGene:EG20263" + ], + [ + "gene_synonym", + "GI:16129035" + ], + [ + "gene_synonym", + "GeneID:946300" + ], + [ + "gene_synonym", + "JW1059" + ], + [ + "gene_synonym", + "NP_415590.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75933" + ], + [ + "gene_synonym", + "b1072" + ], + [ + "gene_synonym", + "flaU" + ], + [ + "gene_synonym", + "flgA" + ] + ], + "dna_sequence": "ATGCTGATAATAAAACGTAGCGTGGCGATCATCGCGATACTGTTCAGTCCGTTAAGTACGGCGAGCAATCTCACATCGCAATTGCACAACTTTTTTAGCGCCCAACTCGCGGGGGTAAGTGATGAGGTTCGTGTTTCTATTCGTACAGCGCCCAATCTACTACCGCCATGCGAGCAGCCATTGCTTTCGATGAGCAATAATTCCCGCCTGTGGGGCAATGTGAATGTGTTGGCACGCTGCGGTAACGACAAACGATATTTACAGGTTAATGTACAGGCCACAGGAAATTATGTGGTTGCCGCGATGCCCATTGCGCGGGGAGGAAAGCTGGAAGCTGGCAATGTCAAACTGAAACGCGGACGGCTGGATACCCTGCCACCGCGTACGGTGCTGGATATCAATCAACTTGTTGATGCCATTAGCCTGCGCGATCTATCACCCGATCAACCTATCCAGTTAACCCAGTTTCGCCAGGCATGGCGGGTAAAAGCGGGACAACGCGTCAATGTGATCGCCAGCGGTGATGGGTTTAGCGCCAACGCAGAAGGTCAGGCGCTGAACAATGCAGCCGTCGCACAGAATGCGCGGGTGCGCATGGTATCGGGACAGGTAGTCAGCGGCGTTGTTGATGCAGATGGGAATATTCTTATAAACCTGTAA", + "dna_sequence_length": 660, + "functions": [ + "assembly protein for flagellar basal-body periplasmic P ring" + ], + "id": "CDS_1050", + "location": [ + [ + "NC_000913", + 1130863, + "-", + 660 + ] + ], + "md5": "717f4cbaa4a43d6241aa4603100906bc", + "parent_gene": "", + "protein_md5": "038013067a4259ba701397125f92a597", + "protein_translation": "MLIIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003641" + ], + [ + "gene_synonym", + "ECK1058" + ], + [ + "gene_synonym", + "EcoGene:EG14266" + ], + [ + "gene_synonym", + "GI:16129036" + ], + [ + "gene_synonym", + "GeneID:945678" + ], + [ + "gene_synonym", + "JW1060" + ], + [ + "gene_synonym", + "NP_415591.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABW9" + ], + [ + "gene_synonym", + "b1073" + ], + [ + "gene_synonym", + "flbA" + ], + [ + "gene_synonym", + "flgB" + ] + ], + "dna_sequence": "ATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTGCGCGCCCAGCGTCAGGAAGTGCTGGCAGCAAACATCGCCAATGCCGATACCCCTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACCAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAA", + "dna_sequence_length": 417, + "functions": [ + "flagellar component of cell-proximal portion of basal-body rod" + ], + "id": "CDS_1051", + "location": [ + [ + "NC_000913", + 1131018, + "+", + 417 + ] + ], + "md5": "123f74c8264937c133e5a45116bcd7ad", + "parent_gene": "", + "protein_md5": "3e8d86b7a557f5f3957a7efcc60aeb06", + "protein_translation": "MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003643" + ], + [ + "gene_synonym", + "ECK1059" + ], + [ + "gene_synonym", + "EcoGene:EG14267" + ], + [ + "gene_synonym", + "GI:16129037" + ], + [ + "gene_synonym", + "GeneID:946687" + ], + [ + "gene_synonym", + "JW1061" + ], + [ + "gene_synonym", + "NP_415592.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABX2" + ], + [ + "gene_synonym", + "b1074" + ], + [ + "gene_synonym", + "flaW" + ], + [ + "gene_synonym", + "flgC" + ] + ], + "dna_sequence": "ATGGCACTGCTGAATATTTTTGATATCGCCGGGTCGGCGTTAACTGCCCAGTCCCAGCGCCTGAACGTGGCGGCCAGTAATCTGGCGAATGCTGATAGCGTGACCGGTCCCGATGGACAGCCATATCGGGCAAAACAGGTGGTATTCCAGGTTAACGCTGCACCAGGTGCTGCGACAGGCGGCGTAAAGGTTGCCGATGTTATAGAAAGTCAGGCCCCGGACAAACTGGTTTATGAACCGGGTAATCCGCTGGCAGATGCAAAGGGCTACGTAAAAATGCCGAACGTTGATGTTGTCGGAGAGATGGTTAACACCATGTCGGCGTCACGCAGCTATCAGGCCAATGTTGAAGTGCTCAACACGGTGAAAAGCATGATGCTGAAAACCCTTACGCTCGGTCAATAA", + "dna_sequence_length": 405, + "functions": [ + "flagellar component of cell-proximal portion of basal-body rod" + ], + "id": "CDS_1052", + "location": [ + [ + "NC_000913", + 1131438, + "+", + 405 + ] + ], + "md5": "7917ac80ba8bdb8a53fc3cab32a49fd7", + "parent_gene": "", + "protein_md5": "18a635cda0910181c6ca37d44a0e261a", + "protein_translation": "MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003645" + ], + [ + "gene_synonym", + "ECK1060" + ], + [ + "gene_synonym", + "EcoGene:EG14268" + ], + [ + "gene_synonym", + "GI:16129038" + ], + [ + "gene_synonym", + "GeneID:945813" + ], + [ + "gene_synonym", + "JW1062" + ], + [ + "gene_synonym", + "NP_415593.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75936" + ], + [ + "gene_synonym", + "b1075" + ], + [ + "gene_synonym", + "flaV" + ], + [ + "gene_synonym", + "flgD" + ] + ], + "dna_sequence": "ATGTCCATTGCGGTAACCACCACCGATCCGACAAATACCGGCGTCAGTACCACCAGCAGTAGTTCGCTCACGGGCAGCAACGCCGCAGATTTACAAAGCAGTTTTCTGACTTTGCTGGTGGCGCAGCTGAAAAACCAGGACCCGACCAATCCAATGGAAAACAACGAGCTGACGTCGCAATTGGCACAAATCAGCACGGTCAGCGGGATTGAAAAACTCAATACCACGCTCGGATCTATTTCCGGACAGATTGATAACAGCCAGTCGTTACAGGCCAGTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGCAGTGAAGAAGGGGCTGTGACCACGACCACGCCGTTTGGTGTTGAGCTGCAACAGGCGGCAGACAAAGTTACGGCCACCATCACCGATAAAAATGGCGCGGTTGTGCGCACCATTGATATTGGTGAACTGACCGCCGGAGTTCACAGTTTCACCTGGGACGGTACGTTGACTGATGGCAGCACTGCGCCGAACGGTTCTTACAATGTAGCGATTAGCGCCAGTAACGGTGGTACACAACTGGTTGCCCAGCCGCTGCAGTTTGCTCTGGTGCAGGGTGTGATCCGCGGCAACAGCGGTAATACGCTGGATCTCGGCACTTACGGCACCACCACCCTCGACGAAGTACGGCAGATAATTTAA", + "dna_sequence_length": 696, + "functions": [ + "flagellar hook assembly protein" + ], + "id": "CDS_1053", + "location": [ + [ + "NC_000913", + 1131854, + "+", + 696 + ] + ], + "md5": "5c1e875190657bf5dc9dcffcc6724b01", + "parent_gene": "", + "protein_md5": "08037d530361a949c1ac4ce9da07c9c6", + "protein_translation": "MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003647" + ], + [ + "gene_synonym", + "ECK1061" + ], + [ + "gene_synonym", + "EcoGene:EG14269" + ], + [ + "gene_synonym", + "GI:16129039" + ], + [ + "gene_synonym", + "GeneID:945636" + ], + [ + "gene_synonym", + "JW1063" + ], + [ + "gene_synonym", + "NP_415594.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75937" + ], + [ + "gene_synonym", + "b1076" + ], + [ + "gene_synonym", + "flaK" + ], + [ + "gene_synonym", + "flgE" + ] + ], + "dna_sequence": "ATGGCCTTTTCTCAAGCGGTTAGCGGATTAAACGCTGCCGCCACCAACCTCGATGTTATTGGCAACAATATCGCCAACTCCGCCACCTACGGCTTTAAATCAGGCACGGCCTCTTTTGCCGATATGTTTGCCGGTTCGAAAGTGGGACTGGGGGTAAAAGTTGCCGGTATCACTCAGGACTTTACCGATGGCACGACCACCAACACCGGGCGAGGTCTGGACGTTGCTATCAGCCAGAACGGTTTTTTCCGTCTGGTAGACAGCAACGGTTCGGTGTTCTACAGCCGTAACGGACAATTTAAGCTGGATGAAAACCGTAACCTGGTGAATATGCAAGGTTTACAGCTGACGGGTTACCCGGCAACCGGTACGCCGCCGACTATTCAGCAAGGGGCGAATCCGACCAATATTTCGATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAATTCCAGTGATCCGCTTCCTACTGTTACGCCATTCAGCGCCAGCAATGCGGATAGCTATAACAAAAAAGGTTCGGTGACTGTTTTCGACAGTCAGGGTAATGCTCATGACATGAGCGTCTACTTTGTGAAGACCGGGGATAATAACTGGCAGGTCTACACCCAGGATAGCAGTGATCCAAACAGCATTGCGAAGACAGCGACAACACTGGAATTTAATGCTAATGGCACATTAGTGGATGGTGCGATGGCGAATAATATCGCAACCGGCGCAATTAACGGTGCAGAACCCGCCACGTTTAGTCTGAGCTTCCTCAACTCCATGCAGCAAAATACCGGCGCTAACAATATTGTGGCAACCACCCAGAACGGCTACAAACCGGGCGATCTGGTGAGTTATCAAATCAATGATGACGGTACGGTTGTCGGCAACTATTCCAACGAACAAACCCAACTGCTGGGGCAGATTGTACTGGCGAACTTTGCCAACAACGAAGGTCTGGCATCCGAAGGCGACAACGTCTGGTCTGCGACGCAATCTTCTGGCGTGGCGCTGTTGGGGACAGCCGGGACGGGAAACTTTGGCACCCTGACCAACGGTGCGCTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAA", + "dna_sequence_length": 1209, + "functions": [ + "flagellar hook protein" + ], + "id": "CDS_1054", + "location": [ + [ + "NC_000913", + 1132574, + "+", + 1209 + ] + ], + "md5": "80c0631e86676409d57f9c6d34792520", + "parent_gene": "", + "protein_md5": "301d9eb9242556c6164f2bcbeb1fa61f", + "protein_translation": "MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003649" + ], + [ + "gene_synonym", + "ECK1062" + ], + [ + "gene_synonym", + "EcoGene:EG14270" + ], + [ + "gene_synonym", + "GI:16129040" + ], + [ + "gene_synonym", + "GeneID:945639" + ], + [ + "gene_synonym", + "JW1064" + ], + [ + "gene_synonym", + "NP_415595.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75938" + ], + [ + "gene_synonym", + "b1077" + ], + [ + "gene_synonym", + "flaX" + ], + [ + "gene_synonym", + "flgF" + ] + ], + "dna_sequence": "ATGGATCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATCAACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCAAAATGGATTACACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTGCTGCCGATGGCACAATCTCGGCGCTCAATCCGGGCGATCCGGCAAATACGGTTGCGCCAGTAGGGCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCACGCGTGGGCCGGTACTGCAGGCAGATCCAACCTTGCGTGTGATGTCGGGGGTTCTGGAAGGCAGTAACGTCAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAA", + "dna_sequence_length": 756, + "functions": [ + "flagellar component of cell-proximal portion of basal-body rod" + ], + "id": "CDS_1055", + "location": [ + [ + "NC_000913", + 1133802, + "+", + 756 + ] + ], + "md5": "5a8276998cb91d482436437b8009eecf", + "parent_gene": "", + "protein_md5": "7094f4fdab69cee2c4307a73117a0697", + "protein_translation": "MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLLSMS", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003652" + ], + [ + "gene_synonym", + "ECK1063" + ], + [ + "gene_synonym", + "EcoGene:EG14271" + ], + [ + "gene_synonym", + "GI:16129041" + ], + [ + "gene_synonym", + "GeneID:945647" + ], + [ + "gene_synonym", + "JW1065" + ], + [ + "gene_synonym", + "NP_415596.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABX5" + ], + [ + "gene_synonym", + "b1078" + ], + [ + "gene_synonym", + "flaL" + ], + [ + "gene_synonym", + "flgG" + ] + ], + "dna_sequence": "ATGATCAGTTCATTATGGATCGCCAAAACGGGCCTTGACGCCCAGCAAACCAATATGGACGTCATTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTGACGCAACTCTAA", + "dna_sequence_length": 783, + "functions": [ + "flagellar component of cell-distal portion of basal-body rod" + ], + "id": "CDS_1056", + "location": [ + [ + "NC_000913", + 1134729, + "+", + 783 + ] + ], + "md5": "190f0aa8c01812403d9f8e2ba5f6d9f2", + "parent_gene": "", + "protein_md5": "d5bb5ca9c52fff494b56f4dc20ba61ee", + "protein_translation": "MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003654" + ], + [ + "gene_synonym", + "ECK1064" + ], + [ + "gene_synonym", + "EcoGene:EG20264" + ], + [ + "gene_synonym", + "GI:16129042" + ], + [ + "gene_synonym", + "GeneID:946996" + ], + [ + "gene_synonym", + "JW5153" + ], + [ + "gene_synonym", + "NP_415597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6S0" + ], + [ + "gene_synonym", + "b1079" + ], + [ + "gene_synonym", + "flaY" + ], + [ + "gene_synonym", + "flgH" + ] + ], + "dna_sequence": "ATGCAAAAAAACGCTGCGCATACTTATGCCATTTCCAGCTTGTTGGTGCTTTCACTAACCGGCTGCGCCTGGATACCCTCCACGCCGCTGGTGCAGGGGGCGACCAGTGCACAACCGGTTCCCGGTCCGACGCCCGTCGCCAACGGTTCTATTTTCCAGTCTGCTCAGCCGATTAACTATGGCTATCAACCGCTGTTTGAAGATCGTCGACCACGCAATATTGGCGATACGCTGACCATCGTGTTGCAGGAGAACGTCAGCGCCAGCAAAAGCTCCTCTGCGAATGCCAGCCGTGACGGTAAAACTAATTTTGGCTTTGATACTGTGCCGCGCTATTTGCAGGGGCTGTTTGGTAACGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAA", + "dna_sequence_length": 699, + "functions": [ + "flagellar protein of basal-body outer-membrane L ring" + ], + "id": "CDS_1057", + "location": [ + [ + "NC_000913", + 1135564, + "+", + 699 + ] + ], + "md5": "9acf47e11b04f8e5d8d4225093c7bc91", + "parent_gene": "", + "protein_md5": "3ea45bf91377644637e3d465a8ecb854", + "protein_translation": "MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003656" + ], + [ + "gene_synonym", + "ECK1065" + ], + [ + "gene_synonym", + "EcoGene:EG20265" + ], + [ + "gene_synonym", + "GI:49176076" + ], + [ + "gene_synonym", + "GeneID:947534" + ], + [ + "gene_synonym", + "JW1067" + ], + [ + "gene_synonym", + "NP_415598.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6S3" + ], + [ + "gene_synonym", + "b1080" + ], + [ + "gene_synonym", + "flaM" + ], + [ + "gene_synonym", + "flgI" + ] + ], + "dna_sequence": "GTGATTAAATTTCTCTCTGCATTAATTCTTCTACTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCAAAACTCACTGATTGGCTATGGTCTGGTGGTGGGGCTGGATGGCACCGGTGACCAGACAACCCAGACGCCGTTTACCACACAAACGCTTAATAACATGCTCTCACAGCTGGGAATTACCGTTCCGACGGGCACCAATATGCAGCTAAAAAACGTCGCTGCGGTAATGGTGACAGCGTCACTTCCTCCGTTTGGACGTCAGGGGCAAACCATCGATGTGGTGGTTTCTTCCATGGGAAATGCCAAAAGCTTGCGTGGAGGTACGTTGTTGATGACACCGCTTAAGGGCGTTGACAGTCAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTGCCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGACTATTCAGGTGCGCGTACCGAGTGGCAACAGTTCCCAGGTCCGCTTCCTTGCCGATATTCAGAATATGCAGGTTAATGTCACCCCGCAGGACGCTAAAGTAGTGATTAACTCGCGCACCGGTTCGGTGGTGATGAATCGCGAAGTGACCCTCGACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATAACGTGGTGCGCGCGCTCAATGCGCTGGGCGCTACGCCGATGGATCTGATGTCCATACTGCAATCAATGCAAAGTGCGGGATGTCTGCGGGCAAAACTGGAAATCATCTGA", + "dna_sequence_length": 1098, + "functions": [ + "putative flagellar basal body protein" + ], + "id": "CDS_1058", + "location": [ + [ + "NC_000913", + 1136274, + "+", + 1098 + ] + ], + "md5": "880cacc07960780752eea0f7819f1865", + "parent_gene": "", + "protein_md5": "aefe099728db0e163b2fde586b6afe8f", + "protein_translation": "MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKLEII", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003658" + ], + [ + "gene_synonym", + "ECK1066" + ], + [ + "gene_synonym", + "EcoGene:EG14272" + ], + [ + "gene_synonym", + "GI:16129044" + ], + [ + "gene_synonym", + "GeneID:947456" + ], + [ + "gene_synonym", + "JW1068" + ], + [ + "gene_synonym", + "NP_415599.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75942" + ], + [ + "gene_synonym", + "b1081" + ], + [ + "gene_synonym", + "flaZ" + ], + [ + "gene_synonym", + "flgJ" + ] + ], + "dna_sequence": "ATGATCAGCGACAGCAAACTACTGGCAAGTGCGGCCTGGGATGCGCAATCACTCAACGAACTAAAGGCGAAAGCGGGCGAAGATCCGGCGGCAAATATCCGTCCGGTGGCCCGTCAGGTGGAAGGGATGTTCGTGCAGATGATGTTGAAAAGCATGCGCGACGCTTTACCAAAAGATGGCCTGTTCAGCAGCGAGCACACTCGCCTGTATACCAGTATGTATGACCAGCAGATTGCCCAACAGATGACGGCGGGCAAAGGTCTGGGGCTTGCAGAGATGATGGTTAAACAGATGACGCCAGAACAACCATTGCCAGAGGAGTCCACGCCAGCAGCACCGATGAAATTCCCGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGCCACGTAACTACGATGATTCGCTGCCGGGTGACAGTAAAGCATTCCTCGCGCAACTCTCGCTGCCCGCCCAACTGGCAAGCCAGCAAAGCGGTGTGCCACATCATTTGATCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGA", + "dna_sequence_length": 942, + "functions": [ + "flagellar rod assembly protein and murein hydrolase", + "flagellum-specific muramidase" + ], + "id": "CDS_1059", + "location": [ + [ + "NC_000913", + 1137371, + "+", + 942 + ] + ], + "md5": "c1592b22f9b91f33cf7f27099188aa51", + "parent_gene": "", + "protein_md5": "54abc19c1f181230004e3c23443d7c6a", + "protein_translation": "MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPAQLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003660" + ], + [ + "gene_synonym", + "ECK1067" + ], + [ + "gene_synonym", + "EcoGene:EG11967" + ], + [ + "gene_synonym", + "GI:16129045" + ], + [ + "gene_synonym", + "GeneID:945648" + ], + [ + "gene_synonym", + "JW1069" + ], + [ + "gene_synonym", + "NP_415600.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33235" + ], + [ + "gene_synonym", + "b1082" + ], + [ + "gene_synonym", + "flaS" + ], + [ + "gene_synonym", + "flgK" + ] + ], + "dna_sequence": "ATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGCTGGGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGCCAGCGTTGATCAGATCAACAACTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAATGGTTACTCACTGGTTCAGGGAAGTACGGCGCGGCAACTGGCGGCAGTTCCTTCCAGCGCTGACCCTTCTCGTACGACTGTCGCTTATGTTGATGGGACGGCAGGCAATATTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGATTTCTTTGCTATCGGTAAGCCCGCGGTTCTGCAAAACACGAAAAACAAAGGTGACGTTGCGATCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGATAATAATCAGTGGCAGGTCACCCGCCTTGCCAGCAATACCACTTTTACGGTGACGCCGGATGCCAACGGTAAAGTGGCATTTGATGGTCTGGAGTTGACGTTTACAGGAACGCCTGCCGTTAACGACAGCTTCACGCTGAAACCAGTAAGTGACGCCATCGTCAACATGGATGTATTAATCACCGACGAAGCGAAAATAGCGATGGCGAGCGAAGAAGATGCGGGTGATAGCGATAACCGCAACGGTCAGGCCCTGCTGGATCTGCAAAGCAACAGTAAAACGGTGGGCGGTGCGAAATCCTTTAACGACGCTTATGCCTCGTTAGTGAGTGATATCGGTAATAAAACCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGATGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAACATTCGCTAA", + "dna_sequence_length": 1644, + "functions": [ + "flagellar hook-filament junction protein 1" + ], + "id": "CDS_1060", + "location": [ + [ + "NC_000913", + 1138378, + "+", + 1644 + ] + ], + "md5": "a6e2f8dee9801127bd96011877da71c0", + "parent_gene": "", + "protein_md5": "20cfdd7fda7c0816078c40680a78ed55", + "protein_translation": "MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR", + "protein_translation_length": 547, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003666" + ], + [ + "gene_synonym", + "ECK1068" + ], + [ + "gene_synonym", + "EcoGene:EG11545" + ], + [ + "gene_synonym", + "GI:16129046" + ], + [ + "gene_synonym", + "GeneID:945646" + ], + [ + "gene_synonym", + "JW1070" + ], + [ + "gene_synonym", + "NP_415601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29744" + ], + [ + "gene_synonym", + "b1083" + ], + [ + "gene_synonym", + "flaT" + ], + [ + "gene_synonym", + "flgL" + ] + ], + "dna_sequence": "ATGCGTTTCAGTACACAGATGATGTACCAGCAAAACATGCGTGGTATCACCAATTCTCAGGCAGAATGGATGAAGTACGGCGAACAGATGTCGACGGGTAAGCGAGTCGTTAACCCTTCTGACGATCCCATTGCTGCATCACAAGCCGTAGTTCTCTCCCAGGCACAGGCGCAAAACAGCCAGTACACGCTGGCGCGTACTTTCGCCACTCAAAAAGTGTCACTGGAAGAGAGTGTACTTAGCCAGGTCACCACTGCTATCCAGAATGCTCAGGAAAAAATTGTCTACGCCAGCAATGGCACCTTGAGTGACGATGACCGGGCCTCGCTGGCTACGGATATTCAGGGGCTTCGTGACCAGTTGCTGAATCTGGCAAACACCACTGACGGTAACGGGCGCTACATTTTTGCCGGTTATAAAACAGAGACTGCGCCGTTTAGCGAAGAGAAAGGGAAATACGTCGGTGGAGCAGAAAGTATTAAACAACAGGTCGATGCTTCGCGTTCGATGGTGATAGGGCACACGGGTGACAAAATTTTCGACAGTATTACCAGCAACGCGGTAGCGGAACCAGACGGTAGCGCTTCTGAAACCAATCTTTTTGCCATGCTGGATAGTGCCATCGCAGCCCTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATAAAACCAACCGCGGACTGAAAAACTCGCTGAACAATGTGCTGACTGTTCGCGCGGAATTAGGCACGCAGCTGAACGAACTGGAGTCGCTGGATTCATTAGGTAGCGATCGCGCTTTAGGGCAAACGCAGCAGATGAGCGATCTGGTTGATGTGGACTGGAATGCAACTATTTCATCTTACATCATGCAGCAAACGGCATTGCAGGCATCGTATAAAGCATTTACCGATATGCAGGGATTGTCGCTCTTCCAGCTCAGCAAATAA", + "dna_sequence_length": 954, + "functions": [ + "flagellar hook-filament junction protein" + ], + "id": "CDS_1061", + "location": [ + [ + "NC_000913", + 1140033, + "+", + 954 + ] + ], + "md5": "38b4c7da86aa443757a984cc1c26c594", + "parent_gene": "", + "protein_md5": "b8fdcc9a6bb467597e983f2b572b97df", + "protein_translation": "MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003668" + ], + [ + "gene_synonym", + "ECK1069" + ], + [ + "gene_synonym", + "EcoGene:EG10859" + ], + [ + "gene_synonym", + "GI:16129047" + ], + [ + "gene_synonym", + "GeneID:945641" + ], + [ + "gene_synonym", + "JW1071" + ], + [ + "gene_synonym", + "NP_415602.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21513" + ], + [ + "gene_synonym", + "ams" + ], + [ + "gene_synonym", + "b1084" + ], + [ + "gene_synonym", + "hmp1" + ], + [ + "gene_synonym", + "rne" + ], + [ + "gene_synonym", + "smbB" + ] + ], + "dna_sequence": "ATGAAAAGAATGTTAATCAACGCAACTCAGCAGGAAGAGTTGCGCGTTGCCCTTGTAGATGGGCAGCGTCTGTATGACCTGGATATCGAAAGTCCAGGGCACGAGCAGAAAAAGGCAAACATCTACAAAGGTAAAATCACCCGCATTGAACCGAGTCTGGAAGCTGCTTTTGTTGATTACGGCGCTGAACGTCACGGTTTCCTCCCACTAAAAGAAATTGCCCGCGAATATTTCCCTGCTAACTACAGTGCTCATGGTCGTCCCAACATTAAAGATGTGTTGCGTGAAGGTCAGGAAGTCATTGTTCAGATCGATAAAGAAGAGCGCGGCAACAAAGGCGCGGCATTAACCACCTTTATCAGTCTGGCGGGTAGCTATCTGGTTCTGATGCCGAACAACCCGCGCGCGGGTGGCATTTCTCGCCGTATCGAAGGCGACGACCGTACCGAATTAAAAGAAGCACTGGCAAGCCTTGAACTGCCGGAAGGCATGGGGCTTATCGTGCGCACCGCTGGCGTCGGCAAATCTGCTGAGGCGCTGCAATGGGATTTAAGCTTCCGTCTGAAACACTGGGAAGCCATCAAAAAAGCCGCTGAAAGCCGCCCGGCCCCGTTCCTGATTCATCAGGAGAGCAACGTAATCGTTCGCGCATTCCGCGATTACTTACGTCAGGACATCGGCGAAATCCTTATCGATAACCCGAAAGTGCTCGAACTGGCACGTCAGCATATCGCTGCATTAGGTCGCCCGGATTTCAGCAGCAAAATCAAACTGTACACCGGCGAGATCCCGCTGTTCAGCCACTACCAGATCGAGTCACAGATCGAGTCCGCCTTCCAGCGTGAAGTTCGTCTGCCGTCTGGTGGTTCCATTGTTATCGACAGCACCGAAGCGTTAACGGCCATCGACATCAACTCCGCACGCGCGACCCGCGGCGGCGATATCGAAGAAACCGCGTTTAACACTAACCTCGAAGCTGCCGATGAGATTGCTCGTCAGCTGCGCCTGCGTGACCTCGGCGGCCTGATTGTTATCGACTTCATCGACATGACGCCAGTACGCCACCAGCGTGCGGTAGAAAACCGTCTGCGTGAAGCGGTGCGTCAGGACCGTGCGCGTATTCAAATCAGCCATATTTCTCGCTTTGGCCTGCTGGAAATGTCCCGTCAGCGCCTGAGCCCATCACTGGGTGAATCCAGTCATCACGTTTGTCCGCGTTGTTCTGGTACTGGCACCGTGCGTGACAACGAATCGCTGTCGCTCTCTATTCTGCGTCTGATCGAAGAAGAAGCGCTGAAAGAGAACACCCAGGAAGTTCACGCCATTGTTCCTGTGCCAATCGCTTCTTACCTGCTGAATGAAAAACGTTCTGCGGTAAATGCCATTGAAACTCGTCAGGACGGTGTGCGCTGTGTAATTGTGCCAAACGATCAGATGGAAACCCCGCACTACCACGTGCTGCGCGTGCGTAAAGGGGAAGAAACCCCAACCTTAAGCTACATGCTGCCGAAGCTGCATGAAGAAGCGATGGCGCTGCCGTCTGAAGAAGAGTTCGCTGAACGTAAGCGTCCGGAACAACCTGCGCTGGCAACCTTTGCCATGCCGGATGTGCCGCCTGCGCCAACGCCAGCTGAACCTGCCGCGCCTGTTGTAGCTCCAGCACCGAAAGCTGCACCGGCAACACCAGCAGCTCCTGCACAACCTGGGCTGTTGAGCCGCTTCTTCGGCGCACTGAAAGCGCTGTTCAGCGGTGGTGAAGAAACCAAACCGACCGAGCAACCAGCACCGAAAGCAGAAGCGAAACCGGAACGTCAACAGGATCGTCGCAAGCCTCGTCAGAACAACCGCCGTGACCGTAATGAGCGCCGCGACACCCGTAGTGAACGTACTGAAGGCAGCGATAATCGCGAAGAAAACCGTCGTAATCGTCGCCAGGCACAGCAGCAGACTGCCGAGACGCGTGAGAGCCGTCAGCAGGCTGAGGTAACGGAAAAAGCGCGTACCGCCGACGAGCAGCAAGCGCCGCGTCGTGAACGTAGCCGCCGCCGTAATGATGATAAACGTCAGGCGCAACAAGAAGCGAAGGCGCTGAATGTTGAAGAGCAATCTGTTCAGGAAACCGAACAGGAAGAACGTGTACGTCCGGTTCAGCCGCGTCGTAAACAGCGTCAGCTCAATCAGAAAGTGCGTTACGAGCAAAGCGTAGCCGAAGAAGCGGTAGTCGCACCGGTGGTTGAAGAAACTGTCGCTGCCGAACCAATTGTTCAGGAAGCGCCAGCTCCACGCACAGAACTGGTGAAAGTCCCGCTGCCAGTCGTAGCGCAAACTGCACCAGAACAGCAAGAAGAGAACAATGCTGATAACCGTGACAACGGTGGCATGCCGCGTCGTTCTCGCCGCTCGCCTCGTCACCTGCGCGTAAGTGGTCAGCGTCGTCGTCGCTATCGTGACGAGCGTTATCCAACCCAGTCGCCAATGCCGTTGACCGTAGCGTGCGCGTCTCCGGAACTGGCCTCTGGCAAAGTCTGGATCCGCTATCCAATTGTACGTCCGCAAGATGTACAGGTTGAAGAGCAGCGCGAACAGGAAGAAGTACATGTGCAGCCGATGGTGACTGAGGTCCCTGTCGCCGCCGCTATCGAACCGGTTGTTAGCGCGCCAGTTGTTGAAGAAGTGGCCGGTGTCGTAGAAGCCCCCGTTCAGGTTGCCGAACCGCAACCGGAAGTGGTTGAAACGACGCATCCTGAAGTGATCGCTGCCGCGGTAACTGAACAGCCGCAGGTGATTACCGAGTCTGATGTTGCCGTAGCCCAGGAAGTTGCAGAACAAGCAGAACCGGTGGTTGAACCGCAGGAAGAGACGGCAGATATTGAAGAAGTTGTCGAAACTGCTGAGGTTGTAGTTGCTGAACCTGAAGTTGTTGCTCAACCTGCCGCGCCAGTAGTCGCTGAAGTCGCAGCAGAAGTTGAAACGGTAGCTGCGGTCGAACCTGAGGTCACCGTTGAGCATAACCACGCTACCGCGCCAATGACGCGCGCTCCAGCACCGGAATATGTTCCGGAGGCACCGCGTCACAGTGACTGGCAGCGCCCTACTTTTGCCTTCGAAGGTAAAGGTGCCGCAGGTGGTCATACGGCAACACATCATGCCTCTGCCGCTCCTGCGCGTCCGCAACCTGTTGAGTAA", + "dna_sequence_length": 3186, + "functions": [ + "endoribonuclease", + "RNA-binding protein;RNA degradosome binding protein" + ], + "id": "CDS_1062", + "location": [ + [ + "NC_000913", + 1144367, + "-", + 3186 + ] + ], + "md5": "e695740d794a780e1acf90b9f09a4bd2", + "parent_gene": "", + "protein_md5": "a8cee9c2716290eeb9ef3a76382cc58f", + "protein_translation": "MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPAQPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE", + "protein_translation_length": 1061, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003672" + ], + [ + "gene_synonym", + "ECK1070" + ], + [ + "gene_synonym", + "EcoGene:EG14413" + ], + [ + "gene_synonym", + "GI:90111210" + ], + [ + "gene_synonym", + "GeneID:945640" + ], + [ + "gene_synonym", + "JW5154" + ], + [ + "gene_synonym", + "NP_415603.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62066" + ], + [ + "gene_synonym", + "b1085" + ], + [ + "gene_synonym", + "yceQ" + ] + ], + "dna_sequence": "GTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTACTCTCCAGAAATATTTCCATCTACCGGTAAGGACTGCAACCCGCAGCCCGCTAACTGCCTGAAAGATCAATACGTCTTACGCCATTGCTGCGTGGATGATCGGTCGGGCAAAATGGGTTATTCCGTAAAATTTCTTGTTTTAACAAGGATGGACACGGAAACGGCCTCATTATTCCACTGCAAGCCTTGTTATAGCAAGATGACTTTTACCATTTATCACCCGCTTACTCACAGTTTTTTCACTTCTTGCTGGTGA", + "dna_sequence_length": 321, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1063", + "location": [ + [ + "NC_000913", + 1144502, + "+", + 321 + ] + ], + "md5": "985d9ba8d5364c6a1bfd69d156d9c212", + "parent_gene": "", + "protein_md5": "1a7f91c874a9ba2ccb82ed6f20bb63a3", + "protein_translation": "MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003675" + ], + [ + "gene_synonym", + "ECK1071" + ], + [ + "gene_synonym", + "EcoGene:EG11118" + ], + [ + "gene_synonym", + "GI:16129049" + ], + [ + "gene_synonym", + "GeneID:945637" + ], + [ + "gene_synonym", + "JW1072" + ], + [ + "gene_synonym", + "NP_415604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA39" + ], + [ + "gene_synonym", + "b1086" + ], + [ + "gene_synonym", + "rluC" + ], + [ + "gene_synonym", + "yceC" + ] + ], + "dna_sequence": "ATGAAAACAGAGACTCCATCCGTAAAAATTGTTGCTATCACCGCTGACGAAGCGGGGCAACGTATCGATAACTTTTTGCGTACCCAATTGAAAGGCGTACCAAAAAGTATGATTTACCGTATTTTGCGTAAAGGCGAAGTGCGGGTGAACAAAAAACGTATTAAGCCTGAATATAAACTCGAAGCGGGTGATGAGGTGCGTATTCCACCGGTTCGCGTTGCTGAGCGGGAAGAAGAGGCGGTTTCGCCACATCTGCAAAAGGTGGCGGCGCTGGCGGACGTCATCTTATATGAAGATGATCACATCCTGGTGCTGAATAAACCTTCCGGTACGGCGGTACATGGCGGCAGTGGTTTAAGCTTCGGCGTTATTGAAGGTTTGCGGGCGTTGCGCCCGGAAGCGCGGTTCCTTGAACTGGTTCATCGTCTTGACCGGGACACCTCAGGTGTTTTGCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAGGGATGCAAAAAGATTACCTGGCGCTGGTGCGCGGTCAGTGGCAGTCGCATGTGAAGAGCGTTCAAGCACCGTTACTGAAAAATATTCTGCAAAGCGGCGAACGTATCGTGCGTGTGAGTCAGGAAGGCAAACCGTCGGAAACACGCTTTAAAGTGGAAGAACGCTATGCATTTGCCACCCTGGTGCGTTGTAGCCCGGTAACAGGGCGTACTCACCAGATCCGTGTGCATACACAATATGCGGGTCATCCGATTGCCTTTGACGATCGCTACGGTGACCGTGAATTTGACAGGCAGCTCACTGAAGCAGGCACGGGATTAAATCGCCTGTTCCTGCACGCTGCAGCGTTGAAGTTTACTCATCCGGGGACCGGTGAGGTGATGCGTATCGAAGCTCCGATGGATGAAGGTTTGAAGCGTTGTTTGCAAAAGCTGCGTAACGCGCGCTAA", + "dna_sequence_length": 960, + "functions": [ + "23S rRNA pseudouridine(955,2504,2580) synthase" + ], + "id": "CDS_1064", + "location": [ + [ + "NC_000913", + 1144940, + "+", + 960 + ] + ], + "md5": "0382455f7fe4a8abf3ba3b5bbe99689c", + "parent_gene": "", + "protein_md5": "3a515f0a14370df3c1280722b9a64586", + "protein_translation": "MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003678" + ], + [ + "gene_synonym", + "ECK1072" + ], + [ + "gene_synonym", + "EcoGene:EG11438" + ], + [ + "gene_synonym", + "GI:90111211" + ], + [ + "gene_synonym", + "GeneID:945631" + ], + [ + "gene_synonym", + "JW5155" + ], + [ + "gene_synonym", + "NP_415605.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A729" + ], + [ + "gene_synonym", + "b1087" + ], + [ + "gene_synonym", + "yceF" + ] + ], + "dna_sequence": "ATGCCTAAACTTATTTTAGCCTCCACCTCGCCATGGCGTCGCGCTCTTCTGGAAAAACTGCAAATCTCTTTTGAATGTGCAGCACCAGAGGTCGACGAAACCCCACGCAGCGACGAATCACCGCGACAGTTGGTGCTTCGACTGGCACAAGAAAAAGCGCAATCTCTGGCGTCACGTTATCCGGATCATTTAATTATTGGTTCAGACCAGGTATGTGTTCTTGATGGCGAAATCACCGGTAAACCGTTAACGGAAGAAAATGCCCGTCTGCAATTACGCAAAGCCAGCGGCAATATCGTCACCTTCTATACTGGACTGGCGTTGTTTAATTCGGCGAATGGGCATCTGCAAACAGAAGTGGAGCCTTTTGACGTCCATTTCCGTCACCTGAGCGAGGCGGAGATTGATAATTACGTGCGTAAAGAGCATCCCCTGCACTGCGCGGGTAGCTTTAAGAGTGAAGGATTTGGCATTACGCTGTTTGAGCGTTTAGAGGGGCGTGATCCTAACACGCTGGTTGGTTTACCGCTAATCGCGCTGTGTCAGATGTTACGTCGGGAAGGGAAAAACCCGCTGATGGGATAG", + "dna_sequence_length": 585, + "functions": [ + "m(7)GTP pyrophosphatase" + ], + "id": "CDS_1065", + "location": [ + [ + "NC_000913", + 1146595, + "-", + 585 + ] + ], + "md5": "0a5152373bc676b74212698f5b446707", + "parent_gene": "", + "protein_md5": "4351f757cf6aee852ca815343ae1137d", + "protein_translation": "MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003684" + ], + [ + "gene_synonym", + "ECK1074" + ], + [ + "gene_synonym", + "EcoGene:EG11119" + ], + [ + "gene_synonym", + "GI:16129051" + ], + [ + "gene_synonym", + "GeneID:945650" + ], + [ + "gene_synonym", + "JW1074" + ], + [ + "gene_synonym", + "NP_415606.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB28" + ], + [ + "gene_synonym", + "b1088" + ], + [ + "gene_synonym", + "yceD" + ] + ], + "dna_sequence": "ATGCAAAAGGTAAAATTACCCCTGACTCTCGATCCGGTTCGTACGGCTCAAAAACGCCTTGATTACCAGGGTATCTATACCCCTGATCAGGTTGAGCGCGTCGCCGAATCCGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGTATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATGGTCTTTGGTGAACTGCCTGAAGAAGCGCAAAAGCCAAACCCATTTGCCGTATTAGCCAGCTTAAAGCGTAAGTAA", + "dna_sequence_length": 522, + "functions": [ + "DUF177 family protein" + ], + "id": "CDS_1066", + "location": [ + [ + "NC_000913", + 1146794, + "+", + 522 + ] + ], + "md5": "b110ff1de0ce4d160e456ad9fd5e1d26", + "parent_gene": "", + "protein_md5": "53fd3b3ffa801fe18b080a169dc0e83d", + "protein_translation": "MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003686" + ], + [ + "gene_synonym", + "ECK1075" + ], + [ + "gene_synonym", + "EcoGene:EG10890" + ], + [ + "gene_synonym", + "GI:16129052" + ], + [ + "gene_synonym", + "GeneID:945657" + ], + [ + "gene_synonym", + "JW1075" + ], + [ + "gene_synonym", + "NP_415607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7N4" + ], + [ + "gene_synonym", + "b1089" + ], + [ + "gene_synonym", + "rpmF" + ] + ], + "dna_sequence": "ATGGCCGTACAACAGAATAAACCAACCCGTTCCAAACGTGGCATGCGTCGTTCCCATGACGCGCTGACCGCAGTCACCAGCCTGTCTGTAGACAAAACTTCTGGTGAAAAACACCTGCGTCACCACATCACTGCCGACGGTTACTACCGCGGCCGCAAGGTCATCGCTAAGTAA", + "dna_sequence_length": 174, + "functions": [ + "50S ribosomal subunit protein L32" + ], + "id": "CDS_1067", + "location": [ + [ + "NC_000913", + 1147367, + "+", + 174 + ] + ], + "md5": "4ba2423edf4a86052d64b39813b8dfdf", + "parent_gene": "", + "protein_md5": "211eeaac246f953b67ca2ccd0477fe3b", + "protein_translation": "MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003692" + ], + [ + "gene_synonym", + "ECK1076" + ], + [ + "gene_synonym", + "EcoGene:EG11437" + ], + [ + "gene_synonym", + "GI:90111212" + ], + [ + "gene_synonym", + "GeneID:946165" + ], + [ + "gene_synonym", + "JW5156" + ], + [ + "gene_synonym", + "NP_415608.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27247" + ], + [ + "gene_synonym", + "b1090" + ], + [ + "gene_synonym", + "plsX" + ] + ], + "dna_sequence": "TTGACACGTCTAACCCTGGCGTTAGATGTCATGGGAGGGGATTTTGGCCCTTCCGTGACAGTGCCTGCAGCATTGCAGGCACTGAATTCTAATTCGCAACTCACTCTTCTTTTAGTCGGCAATTCCGACGCCATCACGCCATTACTTGCTAAAGCTGACTTTGAACAACGTTCGCGTCTGCAGATTATTCCTGCGCAGTCAGTTATCGCCAGTGATGCCCGGCCTTCGCAAGCTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTGGCTGAAGAGGTGGTGGAAATTCCCAATCCTCGCGTGGCGTTGCTCAATATTGGTGAAGAAGAAGTAAAGGGTCTCGACAGTATTCGGGATGCCTCAGCGGTGCTTAAAACAATCCCTTCTATCAATTATATCGGCTATCTTGAAGCCAATGAGTTGTTAACTGGCAAGACAGATGTGCTGGTTTGTGACGGCTTTACAGGAAATGTCACATTAAAGACGATGGAAGGTGTTGTCAGGATGTTCCTTTCTCTGCTGAAATCTCAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAG", + "dna_sequence_length": 1071, + "functions": [ + "putative phosphate acyltransferase" + ], + "id": "CDS_1068", + "location": [ + [ + "NC_000913", + 1147621, + "+", + 1071 + ] + ], + "md5": "62016edd9b907c84e8022f5b3a93743c", + "parent_gene": "", + "protein_md5": "5606b1bc85c0fbe66d3e346637436d35", + "protein_translation": "MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNSDAITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRVALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003696" + ], + [ + "gene_synonym", + "ECK1077" + ], + [ + "gene_synonym", + "EcoGene:EG10277" + ], + [ + "gene_synonym", + "GI:16129054" + ], + [ + "gene_synonym", + "GeneID:946003" + ], + [ + "gene_synonym", + "JW1077" + ], + [ + "gene_synonym", + "NP_415609.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6R0" + ], + [ + "gene_synonym", + "b1091" + ], + [ + "gene_synonym", + "fabH" + ] + ], + "dna_sequence": "ATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACGAAACCGTTTCAACCATGGGCTTTGAAGCGGCGACACGCGCAATTGAGATGGCGGGCATTGAGAAAGACCAGATTGGCCTGATCGTTGTGGCAACGACTTCTGCTACGCACGCTTTCCCGAGCGCAGCTTGTCAGATTCAAAGCATGTTGGGCATTAAAGGTTGCCCGGCATTTGACGTTGCAGCAGCCTGCGCAGGTTTCACCTATGCATTAAGCGTAGCCGATCAATACGTGAAATCTGGGGCGGTGAAGTATGCTCTGGTCGTCGGTTCCGATGTACTGGCGCGCACCTGCGATCCAACCGATCGTGGGACTATTATTATTTTTGGCGATGGCGCGGGCGCTGCGGTGCTGGCTGCCTCTGAAGAGCCGGGAATCATTTCCACCCATCTGCATGCCGACGGTAGTTATGGTGAATTGCTGACGCTGCCAAACGCCGACCGCGTGAATCCAGAGAATTCAATTCATCTGACGATGGCGGGCAACGAAGTCTTCAAGGTTGCGGTAACGGAACTGGCGCACATCGTTGATGAGACGCTGGCGGCGAATAATCTTGACCGTTCTCAACTGGACTGGCTGGTTCCGCATCAGGCTAACCTGCGTATTATCAGTGCAACGGCGAAAAAACTCGGTATGTCTATGGATAATGTCGTGGTGACGCTGGATCGCCACGGTAATACCTCTGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAG", + "dna_sequence_length": 954, + "functions": [ + "3-oxoacyl-[acyl-carrier-protein] synthase III" + ], + "id": "CDS_1069", + "location": [ + [ + "NC_000913", + 1148759, + "+", + 954 + ] + ], + "md5": "1d9c19409a533beefdfb304d3c3adab2", + "parent_gene": "", + "protein_md5": "982e8fe64b3c7e5a1ad44dbbd2c9d022", + "protein_translation": "MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003698" + ], + [ + "gene_synonym", + "ECK1078" + ], + [ + "gene_synonym", + "EcoGene:EG11317" + ], + [ + "gene_synonym", + "GI:16129055" + ], + [ + "gene_synonym", + "GeneID:945766" + ], + [ + "gene_synonym", + "JW1078" + ], + [ + "gene_synonym", + "NP_415610.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAI9" + ], + [ + "gene_synonym", + "b1092" + ], + [ + "gene_synonym", + "fabD" + ], + [ + "gene_synonym", + "tfpA" + ] + ], + "dna_sequence": "ATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCTATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGTATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTCACAGCCTGGGGGAATACTCCGCGCTGGTTTGCGCTGGTGTGATTGATTTCGCTGATGCGGTGCGTCTGGTTGAGATGCGCGGCAAGTTCATGCAAGAAGCCGTACCGGAAGGCACGGGCGCTATGGCGGCAATCATCGGTCTGGATGATGCGTCTATTGCGAAAGCGTGTGAAGAAGCTGCAGAAGGTCAGGTCGTTTCTCCGGTAAACTTTAACTCTCCGGGACAGGTGGTTATTGCCGGTCATAAAGAAGCGGTTGAGCGTGCTGGCGCTGCCTGTAAAGCGGCGGGCGCAAAACGCGCGCTGCCGTTACCAGTGAGCGTACCGTCTCACTGTGCGCTGATGAAACCAGCAGCCGACAAACTGGCAGTAGAATTAGCGAAAATCACCTTTAACGCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCGGGCAAAGTGCTTACTGGCCTGACGAAACGCATTGTCGACACCCTGACCGCCTCGGCGCTGAACGAACCTTCAGCGATGGCAGCGGCGCTCGAGCTTTAA", + "dna_sequence_length": 930, + "functions": [ + "malonyl-CoA-[acyl-carrier-protein] transacylase" + ], + "id": "CDS_1070", + "location": [ + [ + "NC_000913", + 1149728, + "+", + 930 + ] + ], + "md5": "635a513a9e77c72c32d68a86f4152dc7", + "parent_gene": "", + "protein_md5": "cdf8527e4138c1721447a37f11f48ad1", + "protein_translation": "MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPSAMAAALEL", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003700" + ], + [ + "gene_synonym", + "ECK1079" + ], + [ + "gene_synonym", + "EcoGene:EG11318" + ], + [ + "gene_synonym", + "GI:16129056" + ], + [ + "gene_synonym", + "GeneID:945645" + ], + [ + "gene_synonym", + "JW1079" + ], + [ + "gene_synonym", + "NP_415611.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEK2" + ], + [ + "gene_synonym", + "b1093" + ], + [ + "gene_synonym", + "fabG" + ] + ], + "dna_sequence": "ATGAATTTTGAAGGAAAAATCGCACTGGTAACCGGTGCAAGCCGCGGAATTGGCCGCGCAATTGCTGAAACGCTCGCAGCCCGTGGCGCGAAAGTTATTGGCACTGCGACCAGTGAAAATGGCGCTCAGGCGATCAGTGATTATTTAGGTGCCAACGGCAAAGGTCTGATGTTGAATGTGACCGACCCGGCATCTATCGAATCTGTTCTGGAAAAAATTCGCGCAGAATTTGGTGAAGTGGATATCCTGGTCAATAATGCCGGTATCACTCGTGATAACCTGTTAATGCGAATGAAAGATGAAGAGTGGAACGATATTATCGAAACCAACCTTTCATCTGTTTTCCGTCTGTCAAAAGCGGTAATGCGCGCTATGATGAAAAAGCGTCATGGTCGTATTATCACTATCGGTTCTGTGGTTGGTACCATGGGAAATGGCGGTCAGGCCAACTACGCTGCGGCGAAAGCGGGCTTGATCGGCTTCAGTAAATCACTGGCGCGCGAAGTTGCGTCACGCGGTATTACTGTAAACGTTGTTGCTCCGGGCTTTATTGAAACGGACATGACACGTGCGCTGAGCGATGACCAGCGTGCGGGTATCCTGGCGCAGGTTCCTGCGGGTCGCCTCGGCGGCGCACAGGAAATCGCCAACGCGGTTGCATTCCTGGCATCCGACGAAGCAGCTTACATCACGGGTGAAACTTTGCATGTGAACGGCGGGATGTACATGGTCTGA", + "dna_sequence_length": 735, + "functions": [ + "3-oxoacyl-[acyl-carrier-protein] reductase" + ], + "id": "CDS_1071", + "location": [ + [ + "NC_000913", + 1150670, + "+", + 735 + ] + ], + "md5": "43416a296aac81e2ebc59f20ee6bfbe2", + "parent_gene": "", + "protein_md5": "c22a193608c9d8f2f5ee499e05b45f4b", + "protein_translation": "MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003703" + ], + [ + "gene_synonym", + "ECK1080" + ], + [ + "gene_synonym", + "EcoGene:EG50003" + ], + [ + "gene_synonym", + "GI:16129057" + ], + [ + "gene_synonym", + "GeneID:944805" + ], + [ + "gene_synonym", + "JW1080" + ], + [ + "gene_synonym", + "NP_415612.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6A8" + ], + [ + "gene_synonym", + "acpP" + ], + [ + "gene_synonym", + "b1094" + ] + ], + "dna_sequence": "ATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCGAACAGCTGGGCGTTAAGCAGGAAGAAGTTACCAACAATGCTTCTTTCGTTGAAGACCTGGGCGCGGATTCTCTTGACACCGTTGAGCTGGTAATGGCTCTGGAAGAAGAGTTTGATACTGAGATTCCGGACGAAGAAGCTGAGAAAATCACCACCGTTCAGGCTGCCATTGATTACATCAACGGCCACCAGGCGTAA", + "dna_sequence_length": 237, + "functions": [ + "acyl carrier protein (ACP)" + ], + "id": "CDS_1072", + "location": [ + [ + "NC_000913", + 1151615, + "+", + 237 + ] + ], + "md5": "60a76ccbaa64eb77460e1ef2dc256788", + "parent_gene": "", + "protein_md5": "10c00c0561de7dcf4030f0d748031d11", + "protein_translation": "MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003705" + ], + [ + "gene_synonym", + "ECK1081" + ], + [ + "gene_synonym", + "EcoGene:EG12606" + ], + [ + "gene_synonym", + "GI:16129058" + ], + [ + "gene_synonym", + "GeneID:946665" + ], + [ + "gene_synonym", + "JW1081" + ], + [ + "gene_synonym", + "NP_415613.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAI5" + ], + [ + "gene_synonym", + "b1095" + ], + [ + "gene_synonym", + "cvc" + ], + [ + "gene_synonym", + "fabF" + ], + [ + "gene_synonym", + "fabJ" + ], + [ + "gene_synonym", + "vtr" + ] + ], + "dna_sequence": "GTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCAATTGGCTCCGGGATTGGCGGCCTCGGACTGATCGAAGAAAACCACACATCTCTGATGAACGGTGGTCCACGTAAGATCAGCCCATTCTTCGTTCCGTCAACGATTGTGAACATGGTGGCAGGTCATCTGACTATCATGTATGGCCTGCGTGGCCCGAGCATCTCTATCGCGACTGCCTGTACTTCCGGCGTGCACAACATTGGCCATGCTGCGCGTATTATCGCGTATGGCGATGCTGACGTGATGGTTGCAGGTGGCGCAGAGAAAGCCAGTACGCCGCTGGGCGTTGGTGGTTTTGGCGCGGCACGTGCATTATCTACCCGCAATGATAACCCGCAAGCGGCGAGCCGCCCGTGGGATAAAGAGCGTGATGGTTTCGTACTGGGCGATGGTGCCGGTATGCTGGTACTTGAAGAGTACGAACACGCGAAAAAACGCGGTGCGAAAATTTACGCTGAACTCGTCGGCTTTGGTATGAGCAGCGATGCTTATCATATGACGTCACCGCCAGAAAATGGCGCAGGCGCAGCTCTGGCGATGGCAAATGCTCTGCGTGATGCAGGCATTGAAGCGAGTCAGATTGGCTACGTTAACGCGCACGGTACTTCTACGCCGGCTGGCGATAAAGCTGAAGCGCAGGCGGTGAAAACCATCTTCGGTGAAGCTGCAAGCCGTGTGTTGGTAAGCTCCACGAAATCTATGACCGGTCACCTGTTAGGTGCGGCGGGTGCAGTAGAATCTATCTACTCCATCCTGGCGCTGCGCGATCAGGCTGTTCCGCCAACCATCAACCTGGATAACCCGGATGAAGGTTGCGATCTGGATTTCGTACCGCACGAAGCGCGTCAGGTTAGCGGAATGGAATACACTCTGTGTAACTCCTTCGGCTTCGGTGGCACTAATGGTTCTTTGATCTTTAAAAAGATCTAA", + "dna_sequence_length": 1242, + "functions": [ + "3-oxoacyl-[acyl-carrier-protein] synthase II" + ], + "id": "CDS_1073", + "location": [ + [ + "NC_000913", + 1151939, + "+", + 1242 + ] + ], + "md5": "94b26da01716469b105d3cec80abe2d6", + "parent_gene": "", + "protein_md5": "25774368eecd8e1b45be65bb8277cfaa", + "protein_translation": "MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003709" + ], + [ + "gene_synonym", + "ECK1082" + ], + [ + "gene_synonym", + "EcoGene:EG11493" + ], + [ + "gene_synonym", + "GI:16129059" + ], + [ + "gene_synonym", + "GeneID:946647" + ], + [ + "gene_synonym", + "JW1082" + ], + [ + "gene_synonym", + "NP_415614.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28305" + ], + [ + "gene_synonym", + "b1096" + ], + [ + "gene_synonym", + "pabC" + ] + ], + "dna_sequence": "ATGTTCTTAATTAACGGTCATAAGCAGGAATCGCTGGCAGTAAGCGATCGGGCAACGCAGTTTGGTGATGGTTGTTTTACCACCGCCAGAGTTATCGACGGTAAAGTCAGTTTGTTATCGGCGCATATCCAGCGACTACAGGATGCTTGTCAGCGGTTGATGATTTCCTGTGACTTCTGGCCTCAGCTTGAACAAGAGATGAAAACGCTGGCAGCAGAACAGCAAAATGGTGTGCTGAAAGTCGTGATCAGTCGCGGTAGTGGCGGGCGAGGGTACAGCACATTGAACAGCGGACCGGCAACGCGGATTCTCTCCGTTACGGCTTATCCTGCACATTACGACCGTTTGCGTAACGAGGGGATTACGTTGGCGCTAAGCCCGGTGCGGCTGGGGCGCAATCCTCATCTTGCAGGTATTAAACATCTCAATCGTCTTGAGCAAGTATTGATTCGCTCTCATCTTGAGCAGACAAACGCTGATGAGGCGCTGGTCCTTGACAGCGAAGGGTGGGTTACGGAATGCTGTGCGGCTAATTTGTTCTGGCGGAAGGGCAACGTAGTTTATACGCCGCGACTGGATCAGGCAGGTGTTAACGGCATTATGCGACAATTCTGTATCCGTTTGCTGGCACAATCCTCTTATCAGCTTGTCGAAGTGCAAGCCTCTCTGGAAGAGTCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAG", + "dna_sequence_length": 810, + "functions": [ + "4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex" + ], + "id": "CDS_1074", + "location": [ + [ + "NC_000913", + 1153300, + "+", + 810 + ] + ], + "md5": "f74826d77e6f4e12f94c3a83ee6bdcaf", + "parent_gene": "", + "protein_md5": "3508fe4b017a81b605b5f6824f1fce17", + "protein_translation": "MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMPVMPVCACGDVSFSSATLYEYLAPLCERPN", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003712" + ], + [ + "gene_synonym", + "ECK1083" + ], + [ + "gene_synonym", + "EcoGene:EG11494" + ], + [ + "gene_synonym", + "GI:16129060" + ], + [ + "gene_synonym", + "GeneID:945660" + ], + [ + "gene_synonym", + "JW1083" + ], + [ + "gene_synonym", + "NP_415615.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28306" + ], + [ + "gene_synonym", + "b1097" + ], + [ + "gene_synonym", + "yceG" + ] + ], + "dna_sequence": "ATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTGAAGCCAGGGACCGGACGTCTGGCGCTCGGTGAACAGCTTTATGCCGATAAGATCATCAATCGTCCACGGGTTTTTCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCTGAAATTGCTGGAAAGCGGTAAAGAAGCACAGTTCCCTCTGCGACTGGTAGAAGGGATGCGTCTGAGCGATTACCTCAAGCAATTGCGTGAGGCCCCGTATATCAAGCATACGCTGAGCGATGATAAGTACGCCACCGTAGCGCAGGCACTTGAACTGGAAAACCCGGAGTGGATTGAAGGTTGGTTCTGGCCAGACACCTGGATGTATACCGCCAATACCACCGATGTCGCGTTACTCAAGCGAGCGCACAAGAAAATGGTGAAAGCGGTCGATAGCGCCTGGGAAGGGCGTGCGGACGGTCTGCCTTATAAAGATAAAAACCAGTTGGTGACGATGGCATCAATTATCGAAAAAGAAACCGCCGTTGCCAGTGAACGCGATAAGGTTGCCTCAGTATTTATCAACCGTTTACGCATTGGTATGCGCCTGCAGACCGACCCGACCGTGATTTACGGGATGGGAGAGCGTTATAATGGCAAACTTTCTCGTGCAGACCTGGAAACGCCGACAGCGTATAACACCTATACCATTACCGGTCTGCCGCCAGGTGCGATAGCGACGCCGGGGGCGGATTCGCTGAAGGCTGCTGCGCATCCGGCAAAAACGCCGTATCTCTATTTTGTGGCCGATGGTAAAGGTGGTCACACGTTTAATACCAATCTTGCCAGTCATAACAAGTCTGTGCAGGATTATCTGAAAGTGCTTAAGGAAAAAAATGCGCAGTAA", + "dna_sequence_length": 1023, + "functions": [ + "septation protein, ampicillin sensitivity" + ], + "id": "CDS_1075", + "location": [ + [ + "NC_000913", + 1154112, + "+", + 1023 + ] + ], + "md5": "2bde88cd7d02c3bbeea4474c8e52bef7", + "parent_gene": "", + "protein_md5": "ca9f33268dbf27965963de3b46685bf4", + "protein_translation": "MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDKVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003714" + ], + [ + "gene_synonym", + "ECK1084" + ], + [ + "gene_synonym", + "EcoGene:EG12302" + ], + [ + "gene_synonym", + "GI:16129061" + ], + [ + "gene_synonym", + "GeneID:945663" + ], + [ + "gene_synonym", + "JW1084" + ], + [ + "gene_synonym", + "NP_415616.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A720" + ], + [ + "gene_synonym", + "b1098" + ], + [ + "gene_synonym", + "tmk" + ], + [ + "gene_synonym", + "ycfG" + ] + ], + "dna_sequence": "ATGCGCAGTAAGTATATCGTCATTGAGGGGCTGGAAGGCGCAGGCAAAACTACCGCGCGTAATGTGGTGGTTGAGACGCTCGAGCAACTGGGTATCCGCGACATGGTTTTCACTCGGGAACCTGGCGGTACGCAACTTGCCGAAAAGTTAAGAAGCCTGGTGCTGGATATCAAATCGGTAGGCGATGAAGTCATTACCGATAAAGCCGAAGTTCTGATGTTTTATGCCGCGCGCGTTCAACTGGTAGAAACGGTCATCAAACCAGCTCTGGCTAACGGCACCTGGGTGATTGGCGATCGCCACGATCTCTCCACTCAGGCGTATCAGGGCGGCGGACGTGGTATTGACCAACATATGCTGGCAACACTGCGTGATGCTGTTCTCGGGGATTTTCGCCCCGACTTAACGCTCTATCTCGATGTTACCCCGGAAGTTGGCTTAAAACGCGCGCGTGCGCGCGGCGAGCTGGATCGTATTGAGCAAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGA", + "dna_sequence_length": 642, + "functions": [ + "thymidylate kinase" + ], + "id": "CDS_1076", + "location": [ + [ + "NC_000913", + 1155124, + "+", + 642 + ] + ], + "md5": "8a11090d49790cd0d0a0b07e76189bad", + "parent_gene": "", + "protein_md5": "14a046f64260012ee400933c501ee8b5", + "protein_translation": "MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003716" + ], + [ + "gene_synonym", + "ECK1085" + ], + [ + "gene_synonym", + "EcoGene:EG11500" + ], + [ + "gene_synonym", + "GI:16129062" + ], + [ + "gene_synonym", + "GeneID:945661" + ], + [ + "gene_synonym", + "JW1085" + ], + [ + "gene_synonym", + "NP_415617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28631" + ], + [ + "gene_synonym", + "b1099" + ], + [ + "gene_synonym", + "holB" + ] + ], + "dna_sequence": "ATGAGATGGTATCCATGGTTACGACCTGATTTCGAAAAACTGGTAGCCAGCTATCAGGCCGGAAGAGGTCACCATGCGCTACTCATTCAGGCGTTACCGGGCATGGGCGATGATGCTTTAATCTACGCCCTGAGCCGTTATTTACTCTGCCAACAACCGCAGGGCCACAAAAGTTGCGGTCACTGTCGTGGATGTCAGTTGATGCAGGCTGGCACGCATCCCGATTACTACACCCTGGCTCCCGAAAAAGGAAAAAATACGCTGGGCGTTGATGCGGTACGTGAGGTCACCGAAAAGCTGAATGAGCACGCACGCTTAGGTGGTGCGAAAGTCGTTTGGGTAACCGATGCTGCCTTACTAACCGACGCCGCGGCTAACGCATTGCTGAAAACGCTTGAAGAGCCACCAGCAGAAACTTGGTTTTTCCTGGCTACCCGCGAGCCTGAACGTTTACTGGCAACATTACGTAGTCGTTGTCGGTTACATTACCTTGCGCCGCCGCCGGAACAGTACGCCGTGACCTGGCTTTCACGCGAAGTGACAATGTCACAGGATGCATTACTTGCCGCATTGCGCTTAAGCGCCGGTTCGCCTGGCGCGGCACTGGCGTTGTTTCAGGGAGATAACTGGCAGGCTCGTGAAACATTGTGTCAGGCGTTGGCATATAGCGTGCCATCGGGCGACTGGTATTCGCTGCTAGCGGCCCTTAATCATGAACAAGCTCCGGCGCGTTTACACTGGCTGGCAACGTTGCTGATGGATGCGCTAAAACGCCATCATGGTGCTGCGCAGGTGACCAATGTTGATGTGCCGGGCCTGGTCGCCGAACTGGCAAACCATCTTTCTCCCTCGCGCCTGCAGGCTATACTGGGGGATGTTTGCCACATTCGTGAACAGTTAATGTCTGTTACAGGCATCAACCGCGAGCTTCTCATCACCGATCTTTTACTGCGTATTGAGCATTACCTGCAACCGGGCGTTGTGCTACCGGTTCCTCATCTTTAA", + "dna_sequence_length": 1005, + "functions": [ + "DNA polymerase III, delta prime subunit" + ], + "id": "CDS_1077", + "location": [ + [ + "NC_000913", + 1155762, + "+", + 1005 + ] + ], + "md5": "7a4580fa33598bb7bdb41c5328a0d2f7", + "parent_gene": "", + "protein_md5": "36013ebcd78237ebe4a2d0204c80604b", + "protein_translation": "MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003719" + ], + [ + "gene_synonym", + "ECK1086" + ], + [ + "gene_synonym", + "EcoGene:EG12303" + ], + [ + "gene_synonym", + "GI:16129063" + ], + [ + "gene_synonym", + "GeneID:945656" + ], + [ + "gene_synonym", + "JW1086" + ], + [ + "gene_synonym", + "NP_415618.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFQ7" + ], + [ + "gene_synonym", + "b1100" + ], + [ + "gene_synonym", + "ycfH" + ] + ], + "dna_sequence": "ATGTTTTTAGTCGACTCACACTGCCATCTCGATGGTCTGGATTATGAATCTTTGCATAAGGACGTGGATGACGTTCTGGCGAAAGCCGCCGCACGCGATGTGAAATTTTGTCTGGCAGTCGCCACAACATTACCGGGTTATTTACATATGCGGGATCTGGTAGGCGAACGTGACAACGTCGTATTTTCTTGTGGCGTGCATCCACTCAACCAGAATGATCCCTACGATGTAGAAGATTTACGCCGTCTGGCGGCAGAAGAGGGTGTTGTAGCGCTGGGTGAAACCGGGCTGGATTATTATTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACAGAGAAACGGCGGGTAAATTACTGGATCTCGGATTTTACATCTCCTTTTCCGGCATTGTGACCTTCCGTAATGCGGAGCAACTGCGCGATGCTGCGCGTTATGTCCCCCTGGATCGGTTACTGGTGGAAACTGACTCACCTTACCTTGCGCCGGTACCGCATCGAGGAAAAGAGAATCAACCTGCGATGGTTCGTGACGTTGCAGAATACATGGCTGTGTTGAAAGGTGTTGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGA", + "dna_sequence_length": 798, + "functions": [ + "putative DNase" + ], + "id": "CDS_1078", + "location": [ + [ + "NC_000913", + 1156777, + "+", + 798 + ] + ], + "md5": "3110d13f2575d2db478ff48c9270cd5d", + "parent_gene": "", + "protein_md5": "5c96612253d5137046f0005b72e1e632", + "protein_translation": "MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003722" + ], + [ + "gene_synonym", + "CR" + ], + [ + "gene_synonym", + "ECK1087" + ], + [ + "gene_synonym", + "EcoGene:EG10787" + ], + [ + "gene_synonym", + "GI:16129064" + ], + [ + "gene_synonym", + "GeneID:945651" + ], + [ + "gene_synonym", + "JW1087" + ], + [ + "gene_synonym", + "NP_415619.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69786" + ], + [ + "gene_synonym", + "b1101" + ], + [ + "gene_synonym", + "car" + ], + [ + "gene_synonym", + "cat" + ], + [ + "gene_synonym", + "glcA" + ], + [ + "gene_synonym", + "ptsG" + ], + [ + "gene_synonym", + "tgl" + ], + [ + "gene_synonym", + "umg" + ], + [ + "gene_synonym", + "umgC" + ] + ], + "dna_sequence": "ATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATGGCATCATGGTTAAAACCATGGCCGTGGTTGCGCCACTGGTACTGCATTTACCTGCTGAAGAAATCGCCTCTAAACACCTGGCGGATACTGGCGTACTCGGAGGGATTATCTCCGGTGCGATCGCAGCGTACATGTTTAACCGTTTCTACCGTATTAAGCTGCCTGAGTATCTTGGCTTCTTTGCCGGTAAACGCTTTGTGCCGATCATTTCTGGCCTGGCTGCCATCTTTACTGGCGTTGTGCTGTCCTTCATTTGGCCGCCGATTGGTTCTGCAATCCAGACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCACCACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAGCAGGTCAGGTTTTCCACGGCGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCGGTATTATGATCTCCGCGGCGCTGACCTCGTTCCTGACCGGTATCACCGAGCCGATCGAGTTCTCCTTCATGTTCGTTGCGCCGATCCTGTACATCATCCACGCGATTCTGGCAGGCCTGGCATTCCCAATCTGTATTCTTCTGGGGATGCGTGACGGTACGTCGTTCTCGCACGGTCTGATCGACTTCATCGTTCTGTCTGGTAACAGCAGCAAACTGTGGCTGTTCCCGATCGTCGGTATCGGTTATGCGATTGTTTACTACACCATCTTCCGCGTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCAAAAGCGACAGGTACCAGCGAAATGGCACCGGCTCTGGTTGCTGCATTTGGTGGTAAAGAAAACATTACTAACCTCGACGCATGTATTACCCGTCTGCGCGTCAGCGTTGCTGATGTGTCTAAAGTGGATCAGGCCGGCCTGAAGAAACTGGGCGCAGCGGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAA", + "dna_sequence_length": 1434, + "functions": [ + "fused glucose-specific PTS enzymes: IIB component/IIC component" + ], + "id": "CDS_1079", + "location": [ + [ + "NC_000913", + 1157869, + "+", + 1434 + ] + ], + "md5": "172248c5e00080e4a02e8cff95abde76", + "parent_gene": "", + "protein_md5": "bcf0eda5bf6c0577bd8206fa6c2906b2", + "protein_translation": "MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003724" + ], + [ + "gene_synonym", + "ECK1088" + ], + [ + "gene_synonym", + "EcoGene:EG10306" + ], + [ + "gene_synonym", + "GI:16129065" + ], + [ + "gene_synonym", + "GeneID:945649" + ], + [ + "gene_synonym", + "JW1088" + ], + [ + "gene_synonym", + "NP_415620.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16869" + ], + [ + "gene_synonym", + "b1102" + ], + [ + "gene_synonym", + "fhuE" + ] + ], + "dna_sequence": "ATGCTTTCAACACAATTTAACAGGGATAATCAATATCAAGCCATCACCAAACCGTCACTACTTGCCGGTTGCATAGCACTGGCACTATTACCTTCTGCCGCTTTTGCTGCACCAGCCACTGAAGAAACGGTGATTGTTGAGGGTTCAGCCACAGCTCCAGATGATGGCGAAAATGATTACAGCGTAACGTCTACCTCTGCGGGTACCAAAATGCAGATGACTCAACGTGATATTCCTCAGTCGGTCACTATTGTTAGCCAGCAGCGGATGGAAGATCAGCAGTTACAAACGCTGGGCGAAGTGATGGAAAACACGCTGGGGATCAGCAAAAGTCAGGCGGATTCCGATCGTGCTCTTTATTATTCCCGCGGATTCCAGATCGATAACTATATGGTTGATGGTATCCCCACCTATTTTGAATCGCGCTGGAATCTGGGCGACGCACTTTCTGATATGGCACTCTTTGAACGCGTAGAAGTAGTGCGTGGCGCGACAGGACTCATGACCGGGACGGGTAATCCATCTGCGGCAATTAATATGGTTCGAAAACACGCGACCAGTCGTGAATTTAAAGGCGATGTCTCGGCGGAATACGGTAGCTGGAACAAAGAACGGTATGTGGCGGATTTACAAAGCCCACTCACCGAAGACGGTAAAATCCGCGCGCGAATTGTCGGCGGCTACCAGAATAACGACTCATGGCTGGACCGCTACAACAGTGAAAAGACCTTCTTCTCGGGCATTGTCGATGCTGATTTAGGCGATCTTACGACGCTTTCAGCCGGTTACGAATATCAGCGCATTGATGTTAATAGCCCTACCTGGGGCGGTTTACCGCGCTGGAATACTGATGGCAGCAGCAACAGTTACGATCGCGCACGCAGTACCGCACCTGACTGGGCGTACAACGATAAAGAGATCAACAAGGTCTTTATGACCCTGAAGCAGCAGTTTGCTGATACCTGGCAAGCGACACTGAATGCCACCCACTCTGAAGTCGAATTTGACAGCAAAATGATGTATGTCGATGCCTATGTAAACAAAGCGGATGGTATGCTGGTTGGGCCATACAGTAATTATGGACCTGGCTTTGATTATGTCGGCGGCACCGGTTGGAACAGTGGCAAACGTAAAGTTGATGCGCTGGATTTGTTCGCTGACGGTAGTTATGAATTGTTTGGTCGTCAGCACAATCTAATGTTTGGTGGCAGTTACAGCAAACAAAACAATCGTTACTTCAGTTCATGGGCCAACATCTTCCCGGATGAAATTGGCAGTTTCTACAACTTTAATGGCAATTTCCCACAAACCGACTGGTCACCACAGAGCCTGGCGCAGGACGATACCACACATATGAAATCGTTATATGCTGCCACTCGTGTCACCCTTGCCGATCCGCTGCATCTGATCCTCGGCGCACGTTATACCAACTGGCGGGTTGATACGCTGACTTACAGCATGGAGAAAAACCACACCACGCCTTACGCTGGTCTGGTGTTTGACATCAATGACAACTGGTCGACCTACGCCAGCTATACCTCTATTTTCCAGCCGCAAAATGATCGTGACAGTTCAGGCAAATATCTGGCTCCAATCACCGGTAACAACTACGAGCTGGGTCTGAAATCGGACTGGATGAATAGCCGTCTGACCACCACGTTAGCCATCTTCCGTATTGAGCAGGATAATGTCGCTCAGTCCACCGGTACACCTATCCCCGGCAGCAACGGCGAAACCGCCTATAAAGCGGTGGATGGGACAGTCAGTAAAGGGGTGGAATTTGAACTCAACGGCGCAATTACCGACAACTGGCAGCTGACATTTGGCGCAACGCGCTATATTGCAGAGGATAACGAAGGAAACGCCGTTAATCCTAATCTGCCACGCACCACGGTTAAAATGTTCACCAGCTATCGGTTGCCTGTCATGCCAGAGTTGACGGTCGGCGGTGGTGTTAACTGGCAAAATCGCGTGTATACCGACACCGTGACGCCGTATGGCACCTTCCGCGCCGAGCAAGGTAGCTACGCGCTGGTGGATCTCTTCACCCGCTACCAGGTGACGAAAAACTTCTCGTTACAGGGGAACGTCAATAACCTGTTCGACAAAACCTACGATACCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGA", + "dna_sequence_length": 2190, + "functions": [ + "ferric-rhodotorulic acid outer membrane transporter" + ], + "id": "CDS_1080", + "location": [ + [ + "NC_000913", + 1161551, + "-", + 2190 + ] + ], + "md5": "ea4be3bff0c04b952733395c511bc916", + "parent_gene": "", + "protein_md5": "4688701e8c2a74e0660d7d249bf208a0", + "protein_translation": "MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQQFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGTPRNFSITGTYQF", + "protein_translation_length": 729, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003729" + ], + [ + "gene_synonym", + "ECK1089" + ], + [ + "gene_synonym", + "EcoGene:EG12172" + ], + [ + "gene_synonym", + "GI:49176077" + ], + [ + "gene_synonym", + "GeneID:948549" + ], + [ + "gene_synonym", + "JW1089" + ], + [ + "gene_synonym", + "NP_415621.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE7" + ], + [ + "gene_synonym", + "b1103" + ], + [ + "gene_synonym", + "hinT" + ], + [ + "gene_synonym", + "ycfF" + ] + ], + "dna_sequence": "GTGGCAGAAGAAACTATATTCAGCAAAATTATTCGTCGTGAGATCCCCTCCGATATCGTCTACCAGGATGATCTGGTAACGGCGTTTCGCGATATTTCGCCGCAAGCGCCAACGCATATTCTGATCATTCCGAATATCCTCATTCCGACTGTGAACGACGTCTCAGCTGAGCATGAGCAGGCGCTGGGACGCATGATCACCGTAGCGGCAAAAATTGCTGAGCAAGAAGGTATTGCCGAAGATGGCTATCGTCTGATCATGAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAAAGGTCTGTAA", + "dna_sequence_length": 360, + "functions": [ + "purine nucleoside phosphoramidase, dadA activator protein" + ], + "id": "CDS_1081", + "location": [ + [ + "NC_000913", + 1161885, + "+", + 360 + ] + ], + "md5": "8c4044a71c97b4a6462c275aedb31ca7", + "parent_gene": "", + "protein_md5": "5ec0a5dd41b1ecfa4c370d803bcc79d4", + "protein_translation": "MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003731" + ], + [ + "gene_synonym", + "ECK1090" + ], + [ + "gene_synonym", + "EcoGene:EG13430" + ], + [ + "gene_synonym", + "GI:16129067" + ], + [ + "gene_synonym", + "GeneID:948539" + ], + [ + "gene_synonym", + "JW1090" + ], + [ + "gene_synonym", + "NP_415622.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75946" + ], + [ + "gene_synonym", + "b1104" + ], + [ + "gene_synonym", + "ycfL" + ] + ], + "dna_sequence": "ATGAGAAAAGGATGCTTTGGGCTGGTGTCTCTGGTGTTGTTACTGCTGGTGGGCTGTCGTTCACATCCGGAAATTCCGGTGAATGATGAGCAATCGCTGGTGATGGAGTCATCTTTATTGGCTGCGGGCATCAGTGCAGAAAAGCCCTTCCTTTCGACGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGTTCATTATCGTTTTTACTGGTATGACGCCAGAGGGCTGGAGATGCATCCTCTGGAAAGGCCACGCAGCGTTACCATTCCCGCACATTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACTTTATCTATATTTGTAA", + "dna_sequence_length": 378, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1082", + "location": [ + [ + "NC_000913", + 1162247, + "+", + 378 + ] + ], + "md5": "8d3342475a04de7945d0d7265d27b37c", + "parent_gene": "", + "protein_md5": "49abb01d1a4ae381d598799580d8c3fa", + "protein_translation": "MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003733" + ], + [ + "gene_synonym", + "ECK1091" + ], + [ + "gene_synonym", + "EcoGene:EG13431" + ], + [ + "gene_synonym", + "GI:16129068" + ], + [ + "gene_synonym", + "GeneID:948536" + ], + [ + "gene_synonym", + "JW5157" + ], + [ + "gene_synonym", + "NP_415623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB38" + ], + [ + "gene_synonym", + "b1105" + ], + [ + "gene_synonym", + "lpoB" + ], + [ + "gene_synonym", + "ycfM" + ] + ], + "dna_sequence": "ATGACAAAAATGAGTCGCTACGCCTTGATTACCGCGCTGGCGATGTTTCTCGCCGGGTGTGTGGGGCAACGTGAACCTGCACCGGTAGAAGAAGTGAAACCAGCGCCGGAACAACCAGCCGAGCCACAACAGCCTGTCCCCACAGTGCCCTCGGTGCCGACGATCCCGCAGCAGCCAGGCCCAATTGAGCACGAAGATCAAACTGCACCGCCTGCGCCGCATATTCGCCATTATGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTAGGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAATGTCGGCGCTCATTACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGAAATTATCTGGTCAGGTAAAGGTGCCGTTTCGCAGCAATAA", + "dna_sequence_length": 642, + "functions": [ + "OM lipoprotein stimulator of MrcB transpeptidase" + ], + "id": "CDS_1083", + "location": [ + [ + "NC_000913", + 1162638, + "+", + 642 + ] + ], + "md5": "fef271430b5d157435b95c72f5f194b4", + "parent_gene": "", + "protein_md5": "c65ae3b77f5a90c598beb8fb073593d0", + "protein_translation": "MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003735" + ], + [ + "gene_synonym", + "ECK1092" + ], + [ + "gene_synonym", + "EcoGene:EG13432" + ], + [ + "gene_synonym", + "GI:16129069" + ], + [ + "gene_synonym", + "GeneID:948525" + ], + [ + "gene_synonym", + "JW1092" + ], + [ + "gene_synonym", + "NP_415624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75948" + ], + [ + "gene_synonym", + "b1106" + ], + [ + "gene_synonym", + "thiK" + ], + [ + "gene_synonym", + "ycfN" + ] + ], + "dna_sequence": "GTGCCGTTTCGCAGCAATAATCCCATCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTATCATCCCGTCACGACGTTTAATAGTGGGCTTAGTGGCGGGAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATCCTGATGCGCCGCAGTCCGCGTTCTTGCGCCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCATTTATATCTCCGTGACTGGATGGTAGTCGACTATCTGCCCGGCGCGGTAAAAACGTATTTGCCGGATACCAACGAACTGGCAGGCTTGCTGTATTATCTACATCAACAACCACGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGCAGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAATGTTAAAACGTCTGCGCAAAGCGCGGGAACCACGGCCTTTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGTCAGGGTTAAAACTCATCGACTGGGAGTATGCCGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTGTGGGTGGAAAATACTGAACAGCACCGGCAATTGGTCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTGATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTGGCGGCAGCTATTAATAAAACAATAA", + "dna_sequence_length": 825, + "functions": [ + "thiamine kinase" + ], + "id": "CDS_1084", + "location": [ + [ + "NC_000913", + 1163260, + "+", + 825 + ] + ], + "md5": "dc5bf1e25d6ab9fb57e31e40b78d3433", + "parent_gene": "", + "protein_md5": "2f1d8892182c2bdc8ee494ff7b806976", + "protein_translation": "MPFRSNNPITRDELLSRFFPQYHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003737" + ], + [ + "gene_synonym", + "ECK1093" + ], + [ + "gene_synonym", + "EcoGene:EG13433" + ], + [ + "gene_synonym", + "GI:16129070" + ], + [ + "gene_synonym", + "GeneID:945671" + ], + [ + "gene_synonym", + "JW1093" + ], + [ + "gene_synonym", + "NP_415625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75949" + ], + [ + "gene_synonym", + "b1107" + ], + [ + "gene_synonym", + "nagZ" + ], + [ + "gene_synonym", + "ycfO" + ] + ], + "dna_sequence": "GTGGGTCCAGTAATGTTGGATGTCGAAGGTTACGAACTGGACGCGGAAGAGCGTGAAATACTGGCGCATCCGCTGGTGGGAGGGCTGATTCTCTTTACGCGTAACTATCATGATCCTGCCCAGTTACGTGAACTGGTGCGCCAGATCCGCGCAGCTTCGCGCAATCGTCTGGTGGTGGCGGTTGATCAGGAAGGTGGACGCGTGCAGCGTTTTCGTGAAGGTTTTACCCGCTTGCCAGCGGCGCAATCATTCGCTGCGCTGTCAGGAATGGAAGAGGGTGGCAAACTGGCGCAGGAGGCAGGTTGGTTGATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCCGCGAAAATAAACTCGACGCCATTATGCCTGCGCATGTGATCTACAGTGATGTTGATCCGCGTCCGGCGAGCGGTTCTCCCTACTGGCTGAAAACCGTTTTGCGTCAGGAACTGGGTTTTGACGGCGTGATTTTCTCTGACGATTTATCGATGGAAGGTGCCGCGATTATGGGCAGTTATGCCGAACGCGGGCAGGCTTCACTGGATGCGGGTTGCGATATGATCCTGGTCTGCAATAATCGTAAAGGGGCCGTCAGCGTGTTAGATAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAA", + "dna_sequence_length": 1026, + "functions": [ + "beta N-acetyl-glucosaminidase" + ], + "id": "CDS_1085", + "location": [ + [ + "NC_000913", + 1164095, + "+", + 1026 + ] + ], + "md5": "01344594e3c4b50ba89ad05a78a7d928", + "parent_gene": "", + "protein_md5": "61dc5548ff15eaa6a4612a4e8ee00260", + "protein_translation": "MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003740" + ], + [ + "gene_synonym", + "ECK1094" + ], + [ + "gene_synonym", + "EcoGene:EG13434" + ], + [ + "gene_synonym", + "GI:90111213" + ], + [ + "gene_synonym", + "GeneID:945676" + ], + [ + "gene_synonym", + "JW5158" + ], + [ + "gene_synonym", + "NP_415626.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8E1" + ], + [ + "gene_synonym", + "b1108" + ], + [ + "gene_synonym", + "ycfP" + ] + ], + "dna_sequence": "ATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCCGAAACATGATATGCAGCATCTGCTTAAAGAAGTGGACAAAATGTTGCAACTGAACGTTGACGAGCGTCCGCTAATTTGCGGCGTTGGCTTGGGCGGATACTGGGCGGAACGGATTGGTTTTCTTTGCGACATCCGCCAGGTGATCTTCAACCCTAATTTGTTCCCTTATGAGAACATGGAAGGCAAGATTGATCGCCCGGAAGAGTATGCCGATATTGCCACTAAGTGTGTGACCAACTTCCGTGAGAAGAATCGCGATCGTTGCCTGGTGATTTTGTCGCGTAATGATGAAGCGCTTAACAGCCAGCGGACATCTGAAGAGTTGCATCATTATTACGAGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAA", + "dna_sequence_length": 543, + "functions": [ + "putative UPF0227 family esterase" + ], + "id": "CDS_1086", + "location": [ + [ + "NC_000913", + 1165143, + "+", + 543 + ] + ], + "md5": "6b8e8e1d149fd2e060fa444603a9b2fd", + "parent_gene": "", + "protein_md5": "6d811a959a23ed1a3377425992e348e2", + "protein_translation": "MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003746" + ], + [ + "gene_synonym", + "ECK1095" + ], + [ + "gene_synonym", + "EcoGene:EG10649" + ], + [ + "gene_synonym", + "GI:16129072" + ], + [ + "gene_synonym", + "GeneID:946792" + ], + [ + "gene_synonym", + "JW1095" + ], + [ + "gene_synonym", + "NP_415627.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00393" + ], + [ + "gene_synonym", + "b1109" + ], + [ + "gene_synonym", + "ndh" + ] + ], + "dna_sequence": "TTGACTACGCCATTGAAAAAGATTGTGATTGTCGGCGGCGGTGCTGGTGGGCTGGAAATGGCAACACAGCTGGGGCATAAGCTGGGACGCAAGAAAAAAGCCAAAATTACGCTGGTCGATCGTAACCACAGCCACCTGTGGAAACCGCTGCTGCACGAAGTGGCGACTGGCTCGCTTGATGAAGGCGTCGATGCGTTGAGCTATCTGGCCCATGCGCGCAATCATGGTTTCCAGTTCCAGCTGGGTTCCGTCATTGATATTGATCGTGAAGCGAAAACAATCACTATTGCAGAACTGCGCGACGAGAAAGGTGAACTGCTGGTTCCGGAACGTAAAATCGCCTATGACACCCTGGTAATGGCGCTGGGTAGCACCTCTAACGATTTCAATACGCCAGGTGTCAAAGAGAACTGCATTTTCCTCGATAACCCGCACCAGGCGCGTCGCTTCCACCAGGAGATGCTGAATTTGTTCCTGAAATACTCCGCCAACCTGGGCGCGAATGGCAAAGTGAACATTGCGATTGTCGGCGGCGGCGCGACGGGTGTAGAACTCTCCGCTGAATTGCACAACGCGGTCAAGCAACTGCACAGCTACGGTTACAAAGGCCTGACCAACGAAGCCCTGAACGTAACGCTGGTAGAAGCGGGAGAACGTATTTTGCCTGCGTTACCGCCACGTATCTCTGCTGCGGCCCACAACGAGCTAACGAAACTTGGCGTTCGCGTGCTGACGCAAACCATGGTCACCAGTGCTGATGAAGGCGGCCTGCACACTAAAGATGGCGAATATATTGAGGCTGATCTGATGGTATGGGCAGCCGGGATCAAAGCGCCAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGAAGGGGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTATCAGTATAAAGATCATGGTTCGCTGGTATCGCTGTCGAACTTCTCCACCGTCGGTAGCCTGATGGGTAACCTGACGCGCGGCTCAATGATGATTGAAGGACGAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAA", + "dna_sequence_length": 1305, + "functions": [ + "respiratory NADH dehydrogenase 2/cupric reductase" + ], + "id": "CDS_1087", + "location": [ + [ + "NC_000913", + 1166085, + "+", + 1305 + ] + ], + "md5": "eec257f6258f2abd54e174430246facb", + "parent_gene": "", + "protein_md5": "d24034b9ace40a5fd0c0a6d3c8ec0e21", + "protein_translation": "MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003752" + ], + [ + "gene_synonym", + "ECK1096" + ], + [ + "gene_synonym", + "EcoGene:EG12444" + ], + [ + "gene_synonym", + "GI:16129073" + ], + [ + "gene_synonym", + "GeneID:945977" + ], + [ + "gene_synonym", + "JW1096" + ], + [ + "gene_synonym", + "NP_415628.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB35" + ], + [ + "gene_synonym", + "b1110" + ], + [ + "gene_synonym", + "ycfJ" + ] + ], + "dna_sequence": "GTGAATAAATCAATGTTGGCGGGTATCGGGATTGGTGTCGCAGCTGCGCTGGGCGTAGCGGCAGTGGCCAGTCTGAACGTGTTTGAACGGGGCCCGCAATACGCTCAGGTTGTTTCTGCAACCCCAATCAAGGAAACGGTTAAAACACCGCGTCAGGAGTGTCGCAACGTCACAGTGACCCATCGTCGACCGGTGCAGGATGAAAATCGCATTACCGGGTCGGTGCTCGGCGCTGTTGCTGGCGGCGTGATAGGGCATCAGTTTGGTGGTGGTCGCGGTAAAGATGTCGCCACTGTTGTGGGGGCGCTGGGTGGTGGATATGCCGGTAACCAGATCCAGGGCTCTCTCCAGGAAAGCGATACTTACACGACTACGCAACAGCGTTGTAAAACGGTGTATGACAAGTCAGAAAAAATGCTCGGTTATGATGTGACCTATAAGATTGGCGATCAGCAGGGCAAAATCCGCATGGACCGCGATCCGGGTACGCAGATCCCGCTAGATAGCAACGGGCAACTGATTTTGAATAACAAAGTATAA", + "dna_sequence_length": 540, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1088", + "location": [ + [ + "NC_000913", + 1167599, + "+", + 540 + ] + ], + "md5": "639a24cda394f9b129b6b23eb5c8afae", + "parent_gene": "", + "protein_md5": "0bb9fe6df56d7fe4c9a6d6613406f3d5", + "protein_translation": "MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003754" + ], + [ + "gene_synonym", + "ECK1097" + ], + [ + "gene_synonym", + "EcoGene:EG13435" + ], + [ + "gene_synonym", + "GI:90111214" + ], + [ + "gene_synonym", + "GeneID:947425" + ], + [ + "gene_synonym", + "JW5159" + ], + [ + "gene_synonym", + "NP_415629.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75952" + ], + [ + "gene_synonym", + "b1111" + ], + [ + "gene_synonym", + "ycfQ" + ] + ], + "dna_sequence": "ATGGCAACTGACTCAACACAATGTGTAAAAAAAAGCCGTGGCCGCCCAAAAGTGTTCGACAGGGATGCCGCGCTTGATAAGGCCATGAAATTGTTCTGGCAACACGGTTATGAAGCGACTTCTCTTGCGGACCTCGTCGAAGCGACCGGAGCCAAAGCGCCCACGCTATACGCGGAATTTACCAACAAAGAGGGGTTATTTCGTGCCGTTCTCGACCGCTATATCGATCGTTTTGCCGCTAAGCATGAAGCACAGCTGTTTTGTGAAGAGAAAAGCGTGGAGTCTGCGCTGGCTGACTATTTTGCTGCCATCGCCAACTGCTTTACCAGCAAAGACACCCCGGCAGGCTGCTTCATGATCAACAACTGCACCACCCTCTCCCCAGATTCAGGAGATATCGCCAATACGTTGAAATCACGCCATGCGATGCAAGAGCGCACTTTGCAGCAGTTTTTATGTCAACGACAAGCGCGCGGGGAAATCCCGCCCCACTGTGACGTGACACATCTGGCAGAATTCCTTAATTGTATTATTCAGGGGATGTCGATCAGCGCACGCGAAGGTGCATCGCTGGAAAAACTGATGCAGATTGCCGGAACGACTTTGCGTTTATGGCCCGAACTGGTGAAATAA", + "dna_sequence_length": 633, + "functions": [ + "repressor for bhsA(ycfR)" + ], + "id": "CDS_1089", + "location": [ + [ + "NC_000913", + 1168832, + "-", + 633 + ] + ], + "md5": "5c54302bab3d4dba196965f7ee6864c5", + "parent_gene": "", + "protein_md5": "81001b797bbba7ea9a7f1a2a88c3f213", + "protein_translation": "MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003758" + ], + [ + "gene_synonym", + "ECK1098" + ], + [ + "gene_synonym", + "EcoGene:EG13436" + ], + [ + "gene_synonym", + "GI:16129075" + ], + [ + "gene_synonym", + "GeneID:945492" + ], + [ + "gene_synonym", + "JW1098" + ], + [ + "gene_synonym", + "NP_415630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB40" + ], + [ + "gene_synonym", + "b1112" + ], + [ + "gene_synonym", + "bhsA" + ], + [ + "gene_synonym", + "ycfR" + ] + ], + "dna_sequence": "ATGAAAAACGTAAAAACCCTCATCGCTGCGGCGATTTTAAGCTCCATGTCATTTGCCAGCTTTGCGGCTGTCGAAGTTCAGTCAACGCCAGAAGGCCAACAAAAAGTCGGTACAATCAGTGCTAACGCGGGGACAAATCTGGGATCGCTGGAAGAGCAGCTGGCGCAAAAAGCGGATGAGATGGGCGCAAAATCTTTCCGTATTACTTCTGTAACCGGTCCGAATACCCTCCATGGAACAGCAGTAATTTATAAATAA", + "dna_sequence_length": 258, + "functions": [ + "biofilm, cell surface and signaling protein" + ], + "id": "CDS_1090", + "location": [ + [ + "NC_000913", + 1169073, + "+", + 258 + ] + ], + "md5": "fd3eafc50c6f7e0843e28a8736405e25", + "parent_gene": "", + "protein_md5": "73b02d4ad99a424c0b72a434a130c16e", + "protein_translation": "MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003760" + ], + [ + "gene_synonym", + "ECK1099" + ], + [ + "gene_synonym", + "EcoGene:EG13437" + ], + [ + "gene_synonym", + "GI:16129076" + ], + [ + "gene_synonym", + "GeneID:945666" + ], + [ + "gene_synonym", + "JW5820" + ], + [ + "gene_synonym", + "NP_415631.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75954" + ], + [ + "gene_synonym", + "b1113" + ], + [ + "gene_synonym", + "ldtC" + ], + [ + "gene_synonym", + "ycfS" + ] + ], + "dna_sequence": "GTGATGATCAAAACGCGTTTTTCTCGCTGGCTAACGTTTTTTACGTTCGCCGCTGCCGTGGCGCTGGCGCTACCGGCAAAAGCCAACACCTGGCCGCTGCCGCCAGCGGGCAGTCGTCTGGTTGGCGAAAACAAATTTCATGTGGTGGAAAATGACGGTGGTTCTCTGGAAGCCATCGCCAAAAAATACAACGTCGGCTTTCTCGCTCTGTTACAGGCTAACCCCGGCGTTGATCCTTACGTACCGCGCGCGGGCAGCGTGTTAACGATCCCGTTGCAAACCCTACTTCCAGATGCGCCGCGCGAAGGCATTGTGATCAACATTGCGGAGCTGCGTCTCTATTACTACCCGCCGGGTAAAAATTCGGTAACCGTGTATCCAATAGGTATTGGTCAGTTAGGTGGTGACACGCTGACACCGACAATGGTGACCACCGTTTCAGACAAACGTGCAAACCCAACCTGGACGCCAACGGCAAACATCCGCGCCCGTTATAAAGCACAGGGAATTGAGTTGCCTGCGGTAGTGCCGGCTGGACTGGATAACCCAATGGGCCATCATGCGATTCGTCTGGCGGCCTATGGCGGCGTTTATTTGCTTCATGGTACGAACGCCGATTTCGGCATTGGCATGCGGGTAAGTTCTGGCTGTATTCGTCTGCGGGATGACGATATCAAAACACTCTTTAGCCAGGTCACCCCAGGCACCAAAGTGAATATCATCAACACTCCGATAAAAGTCTCTGCCGAACCAAACGGTGCGCGTCTGGTTGAAGTACATCAGCCGCTGTCAGAGAAGATTGATGACGATCCGCAGCTGCTGCCAATTACGCTGAATAGCGCAATGCAATCATTTAAAGATGCAGCACAAACTGACGCTGAAGTGATGCAACATGTGATGGATGTCCGTTCCGGGATGCCGGTGGATGTCCGCCGTCATCAAGTGAGCCCACAAACGCTGTAA", + "dna_sequence_length": 963, + "functions": [ + "L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1091", + "location": [ + [ + "NC_000913", + 1170374, + "-", + 963 + ] + ], + "md5": "a7168ca2231d6aafb1ce65ca286e5870", + "parent_gene": "", + "protein_md5": "ada6452fdc3320c50c966f10e7cc237c", + "protein_translation": "MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003763" + ], + [ + "gene_synonym", + "ECK1100" + ], + [ + "gene_synonym", + "EcoGene:EG11619" + ], + [ + "gene_synonym", + "GI:16129077" + ], + [ + "gene_synonym", + "GeneID:945681" + ], + [ + "gene_synonym", + "JW1100" + ], + [ + "gene_synonym", + "NP_415632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30958" + ], + [ + "gene_synonym", + "b1114" + ], + [ + "gene_synonym", + "mfd" + ] + ], + "dna_sequence": "ATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACCGGCGCAGCCTGTGCAACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGTCCGGTGGTACTCATTGCACCAGATATGCAAAATGCTCTGCGTTTGCATGATGAAATCAGCCAGTTTACCGATCAAATGGTGATGAATCTGGCGGACTGGGAAACTCTTCCCTACGACAGTTTTTCGCCTCATCAGGACATTATCTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGATTGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCACACAGTTTTCTCCACGGTCATGCGCTGGTGATGAAAAAAGGTCAGCGCCTGTCACGAGATGCATTACGAACCCAACTGGACAGCGCCGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGCGAATACGCCACGCGCGGCGCGTTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGATGAAATCGACAGCCTGCGGGTGTTTGACGTCGACAGCCAGCGCACGCTGGAGGAAGTAGAAGCGATCAATCTGCTGCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGCGATACCTTCGAAGTGAAGCGCGATCCAGAACATATTTACCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCATTGTTCTTCAGCGAACCACTGCCGCCGCTGTTCAGTTATTTCCCTGCCAATACCTTGCTCGTGAATACTGGCGATCTGGAAACCAGTGCCGAACGTTTCCAGGCTGACACGCTGGCGCGTTTTGAGAATCGCGGCGTCGATCCGATGCGCCCGCTGTTGCCACCACAATCGCTCTGGCTGCGGGTGGACGAGCTCTTCTCAGAGCTGAAAAACTGGCCCCGGGTGCAGCTAAAAACTGAACATTTACCGACAAAAGCCGCGAATGCCAATTTAGGTTTCCAGAAACTGCCAGACCTGGCCGTTCAGGCACAACAAAAAGCGCCGCTGGATGCGCTGCGTAAGTTCCTCGAGACTTTCGACGGTCCGGTGGTGTTCTCGGTAGAAAGTGAAGGTCGCCGTGAAGCGCTGGGTGAACTGCTCGCACGAATTAAAATTGCTCCGCAACGCATTATGCGTCTTGATGAAGCCAGCGACCGTGGGCGTTATCTGATGATTGGCGCTGCCGAACATGGTTTTGTCGATACGGTGCGTAATCTGGCGCTGATTTGCGAAAGCGATCTGCTCGGTGAACGCGTTGCCCGTCGTCGTCAGGATTCTCGCCGCACCATCAACCCCGATACACTGATCCGTAACCTTGCGGAACTGCATATTGGTCAGCCGGTGGTCCATCTGGAGCACGGCGTCGGTCGTTATGCCGGAATGACCACGCTGGAAGCGGGTGGCATTACTGGCGAGTATCTGATGCTCACCTATGCCAACGACGCCAAACTGTATGTTCCGGTGTCGTCACTGCATCTGATTAGCCGTTACGCAGGTGGCGCGGAAGAAAACGCCCCGCTGCATAAACTTGGCGGCGATGCGTGGTCACGCGCGCGGCAGAAAGCGGCGGAAAAAGTGCGTGATGTGGCGGCGGAATTGCTGGATATCTACGCGCAACGCGCCGCCAAAGAGGGCTTCGCGTTTAAACACGATCGTGAGCAGTATCAGTTGTTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCGCAGGCCATTAATGCGGTACTTAGCGACATGTGTCAGCCGCTGGCAATGGATCGTCTGGTGTGCGGCGATGTTGGCTTTGGTAAAACAGAAGTGGCGATGCGCGCAGCTTTCCTGGCAGTAGATAACCACAAGCAGGTGGCGGTGCTGGTGCCTACCACCCTTCTCGCGCAGCAGCATTACGACAACTTCCGCGACCGTTTCGCCAACTGGCCGGTACGTATCGAAATGATCTCCCGTTTCCGCAGCGCCAAAGAGCAGACGCAAATCCTTGCGGAAGTGGCGGAAGGGAAAATCGATATTCTGATCGGTACGCACAAACTGCTGCAAAGTGACGTCAAGTTTAAAGATTTAGGCCTGCTGATTGTCGATGAAGAACACCGCTTCGGGGTGCGTCATAAAGAGCGCATTAAAGCGATGCGCGCGAACGTGGATATTCTGACGCTTACTGCAACGCCGATCCCACGTACGCTGAATATGGCAATGAGCGGAATGCGTGACCTGTCGATTATCGCCACGCCGCCCGCCCGTCGTCTGGCAGTTAAAACCTTTGTCCGTGAGTATGACAGCATGGTGGTCCGGGAGGCGATCCTGCGTGAAATTTTGCGCGGAGGACAGGTTTATTATCTCTACAATGATGTGGAAAACATTCAGAAAGCCGCCGAACGGCTGGCAGAACTGGTGCCAGAAGCGCGGATCGCCATCGGTCACGGGCAGATGCGCGAGCGCGAACTGGAACGGGTGATGAATGATTTCCATCATCAACGTTTCAACGTGCTGGTTTGTACAACCATTATCGAAACCGGGATCGACATCCCGACAGCCAACACTATTATCATTGAACGCGCGGATCACTTCGGTCTGGCGCAGCTGCACCAGTTACGCGGTCGCGTCGGACGTTCGCATCATCAGGCATATGCATGGTTGCTGACACCGCATCCAAAAGCGATGACTACCGATGCACAAAAACGTCTTGAAGCAATTGCCTCGCTGGAAGATCTCGGGGCAGGTTTTGCGCTGGCAACGCACGATCTGGAGATTCGCGGCGCGGGTGAACTGCTTGGCGAAGAACAAAGCGGCTCAATGGAAACCATCGGTTTCTCGCTGTATATGGAGTTGCTGGAAAACGCCGTCGATGCACTGAAAGCCGGACGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAAACAGAAGTCGAGCTGCGGATGCCGTCGCTATTGCCAGATGATTTCATCCCTGACGTGAACACGCGTCTGTCGTTCTACAAACGTATTGCCAGCGCCAAAACGGAAAACGAACTGGAAGAGATCAAAGTCGAGCTTATCGATCGCTTCGGCCTGCTGCCAGATCCGGCGCGTACCCTGCTGGATATTGCCCGTCTGCGCCAGCAAGCGCAGAAACTGGGGATCAGGAAGCTGGAAGGTAATGAGAAAGGCGGGGTGATCGAATTTGCCGAGAAGAATCACGTTAATCCGGCCTGGTTGATTGGTTTGCTGCAAAAACAGCCGCAGCATTACCGCCTTGATGGTCCGACGCGCCTGAAATTTATTCAGGATTTGAGTGAGCGGAAAACGCGTATCGAATGGGTACGCCAGTTTATGCGTGAACTGGAAGAGAACGCGATCGCTTAA", + "dna_sequence_length": 3447, + "functions": [ + "transcription-repair coupling factor" + ], + "id": "CDS_1092", + "location": [ + [ + "NC_000913", + 1173964, + "-", + 3447 + ] + ], + "md5": "d9a7f225058c2a41859893c9d019fe09", + "parent_gene": "", + "protein_md5": "96fea58ba2ef4705cd435180e0c05fe7", + "protein_translation": "MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA", + "protein_translation_length": 1148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003767" + ], + [ + "gene_synonym", + "ECK1101" + ], + [ + "gene_synonym", + "EcoGene:EG13438" + ], + [ + "gene_synonym", + "GI:16129078" + ], + [ + "gene_synonym", + "GeneID:945679" + ], + [ + "gene_synonym", + "JW1101" + ], + [ + "gene_synonym", + "NP_415633.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75955" + ], + [ + "gene_synonym", + "b1115" + ], + [ + "gene_synonym", + "ycfT" + ] + ], + "dna_sequence": "ATGAAACAAAAAGAGCTATGGATTAACCAGATCAAAGGGTTATGTATTTGTCTGGTGGTGATTTATCACTCGGTCATTACCTTTTATCCGCATCTGACCACTTTTCAGCATCCGTTATCGGAAGTCCTGAGCAAATGCTGGATCTATTTCAATCTTTACCTTGCCCCCTTTCGTATGCCGGTTTTTTTCTTTATATCCGGCTATTTGATTCGCCGCTATATCGACAGCGTACCGTGGGGAAATTGTCTCGATAAACGGATCTGGAACATCTTCTGGGTGCTGGCGCTTTGGGGCGTGGTGCAGTGGCTGGCGTTAAGTGCGCTGAACCAGTGGCTGGCACCTGAGCGCGATTTAAGCAATGCCTCCAATGCCGCTTATGCCGATTCCACCGGTGAGTTCCTGCACGGGATGATCACCGCCAGCACCAGCTTGTGGTATCTGTATGCGTTAATTGTCTATTTCGTGGTATGTAAAATTTTTAGCCGTCTGGCGCTGCCACTATTCGCCTTGTTTGTACTGCTGAGTGTGGCGGTTAATTTCGTTCCCACGCCGTGGTGGGGAATGAACAGTGTGATCCGCAATTTGCCTTATTACAGCCTTGGCGCATGGTTTGGCGCAACAATAATGACCTGTGTTAAAGAGGTGCCGTTGCGCCGCCATCTGCTGATGGCTTCTTTGCTTACCGTTCTGGCGGTCGGTGCCTGGTTGTTTACTATCTCGCTGCTGTTGTCGCTGGTATCGATTGTGGTGATCATGAAGCTGTTTTATCAATACGAGCAACGATTCGGTATGCGCTCCACCAGCCTGCTGAATGTGATTGGCTCCAACACCATTGCTATCTACACCACCCATCGCATTCTGGTTGAAATATTCAGCTTAACTCTGCTTGCGCAAATGAACGCAGCACGCTGGTCGCCGCAAGTCGAACTGACACTCCTGCTGGTTTATCCCTTTGTCAGTTTGTTCATCTGTACTGTTGCGGGCTTGCTGGTAAGAAAACTTTCACAGCGTGCATTCAGCGATCTGTTGTTCTCCCCGCCTTCACTGCCCGCTGCCGTCAGTTACTCCCGCTAA", + "dna_sequence_length": 1074, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1093", + "location": [ + [ + "NC_000913", + 1175165, + "-", + 1074 + ] + ], + "md5": "04480c5fd37b4e653c8448c6f82e66b7", + "parent_gene": "", + "protein_md5": "e9efcd3a80a658300659ce3eee5d4220", + "protein_translation": "MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003772" + ], + [ + "gene_synonym", + "ECK1102" + ], + [ + "gene_synonym", + "EcoGene:EG13439" + ], + [ + "gene_synonym", + "GI:16129079" + ], + [ + "gene_synonym", + "GeneID:945673" + ], + [ + "gene_synonym", + "JW5161" + ], + [ + "gene_synonym", + "NP_415634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC3" + ], + [ + "gene_synonym", + "b1116" + ], + [ + "gene_synonym", + "lolC" + ], + [ + "gene_synonym", + "ycfU" + ] + ], + "dna_sequence": "ATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGTGGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACGGCGTTAATCGCGTCGCACCTATTACTACCGGTGATGTGGTACTGCAAAGCGCGCGCAGCGTGGCGGTCGGGGTGATGCTCGGTATCGACCCGGCGCAAAAAGATCCACTTACACCGTATCTGGTCAATGTGAAACAAACTGACCTCGAGCCGGGGAAATATAATGTCATCCTCGGCGAACAACTTGCCTCACAGCTAGGCGTTAATCGCGGTGATCAAATCCGCGTGATGGTACCATCTGCCAGCCAGTTCACGCCGATGGGGCGTATTCCAAGCCAGCGCCTGTTCAATGTGATTGGCACTTTCGCCGCCAACAGTGAAGTCGATGGCTATGAAATGCTGGTGAATATTGAGGATGCCTCGCGTCTGATGCGTTATCCGGCAGGCAATATTACCGGCTGGCGTTTGTGGCTGGATGAGCCGCTGAAAGTCGACTCATTAAGTCAGCAAAAACTGCCTGAAGGCAGCAAATGGCAGGACTGGCGTGATCGTAAAGGCGAGTTGTTCCAGGCCGTACGCATGGAAAAAAATATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAA", + "dna_sequence_length": 1200, + "functions": [ + "lipoprotein-releasing system transmembrane protein" + ], + "id": "CDS_1094", + "location": [ + [ + "NC_000913", + 1175427, + "+", + 1200 + ] + ], + "md5": "1cbdd3d9e2874823c058d9197d55411b", + "parent_gene": "", + "protein_md5": "244f900a709d08330dbbbe6a157ce87b", + "protein_translation": "MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE", + "protein_translation_length": 399, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003774" + ], + [ + "gene_synonym", + "ECK1103" + ], + [ + "gene_synonym", + "EcoGene:EG13440" + ], + [ + "gene_synonym", + "GI:90111215" + ], + [ + "gene_synonym", + "GeneID:945670" + ], + [ + "gene_synonym", + "JW5162" + ], + [ + "gene_synonym", + "NP_415635.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75957" + ], + [ + "gene_synonym", + "b1117" + ], + [ + "gene_synonym", + "lolD" + ], + [ + "gene_synonym", + "ycfV" + ] + ], + "dna_sequence": "ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAGGTGAAATGATGGCGATCGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACCTGCTGGGCGGGCTGGATACGCCAACCTCCGGCGATGTGATTTTTAATGGTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACCGCCCTGGAAAACGTGGCTATGCCGCTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCACTTGAGATGTTAAAAGCGGTGGGGCTGGATCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTGGTGAATAACCCGCGCCTGGTACTGGCGGATGAACCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTTGCTTGGGGAATTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA", + "dna_sequence_length": 702, + "functions": [ + "outer membrane-specific lipoprotein transporter subunit" + ], + "id": "CDS_1095", + "location": [ + [ + "NC_000913", + 1176619, + "+", + 702 + ] + ], + "md5": "934e893ec5bd7664264adb6dcecd042d", + "parent_gene": "", + "protein_md5": "a0bb6da05e76073d54f884b632b12e60", + "protein_translation": "MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003776" + ], + [ + "gene_synonym", + "ECK1104" + ], + [ + "gene_synonym", + "EcoGene:EG13441" + ], + [ + "gene_synonym", + "GI:16129081" + ], + [ + "gene_synonym", + "GeneID:945665" + ], + [ + "gene_synonym", + "JW1104" + ], + [ + "gene_synonym", + "NP_415636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75958" + ], + [ + "gene_synonym", + "b1118" + ], + [ + "gene_synonym", + "lolE" + ], + [ + "gene_synonym", + "ycfW" + ] + ], + "dna_sequence": "ATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGACGGCGGCGCGGCGGCATGGTGTCGCTGATCTCCGTTATTTCTACCATTGGCATTGCCCTCGGCGTGGCGGTATTGATCGTCGGCTTAAGCGCGATGAACGGCTTTGAACGCGAACTGAACAACCGTATTCTGGCGGTGGTGCCGCATGGTGAAATCGAGGCGGTGGATCAGCCGTGGACTAACTGGCAGGAAGCACTGGATCACGTGCAAAAAGTGCCGGGTATTGCCGCTGCCGCGCCGTATATCAATTTCACCGGGCTGGTGGAAAGTGGCGCGAATCTTCGCGCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGGGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGCTGAAAGTGAAGCAGGGGGATTGGGTGTCGATTATGATCCCCAACTCGAATCCCGAGCATAAACTGATGCAGCCAAAACGTGTGCGTTTGCACGTTGCCGGTATTTTGCAGTTGAGTGGTCAACTCGATCACAGTTTTGCCATGATCCCGCTGGCGGATGCCCAACAATATCTTGATATGGGTTCCAGCGTGTCAGGTATTGCCCTTAAAATGACGGATGTTTTCAACGCCAATAAGCTGGTACGCGATGCGGGTGAAGTGACCAACAGCTATGTTTATATTAAAAGCTGGATTGGTACTTACGGCTATATGTATCGCGATATCCAAATGATCCGCGCCATTATGTATCTGGCGATGGTACTGGTGATTGGCGTGGCCTGTTTCAACATCGTCTCCACCTTAGTGATGGCGGTGAAAGACAAGAGTGGCGATATCGCAGTATTAAGAACGCTGGGGGCGAAAGATGGTTTAATTCGCGCCATCTTTGTCTGGTATGGATTGCTGGCAGGGCTGTTCGGCAGCCTGTGTGGTGTGATTATCGGCGTAGTGGTTTCACTGCAACTTACCCCGATTATTGAGTGGATTGAAAAGTTGATCGGTCATCAGTTCCTCTCCAGCGATATCTATTTTATTGATTTCCTGCCATCGGAATTGCACTGGCTGGACGTCTTCTACGTACTGGTCACAGCATTGTTGCTGAGTCTTTTGGCAAGTTGGTATCCGGCGCGGCGCGCCAGTAATATTGACCCTGCGCGAGTCCTTAGCGGCCAGTAA", + "dna_sequence_length": 1245, + "functions": [ + "lipoprotein-releasing system transmembrane protein" + ], + "id": "CDS_1096", + "location": [ + [ + "NC_000913", + 1177320, + "+", + 1245 + ] + ], + "md5": "4d31c807c34ce65120163bf2141f1843", + "parent_gene": "", + "protein_md5": "eb86abe3a553dee6e1d891af3baf67a5", + "protein_translation": "MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ", + "protein_translation_length": 414, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003778" + ], + [ + "gene_synonym", + "ECK1105" + ], + [ + "gene_synonym", + "EcoGene:EG13442" + ], + [ + "gene_synonym", + "GI:16129082" + ], + [ + "gene_synonym", + "GeneID:945664" + ], + [ + "gene_synonym", + "JW1105" + ], + [ + "gene_synonym", + "NP_415637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75959" + ], + [ + "gene_synonym", + "b1119" + ], + [ + "gene_synonym", + "nagK" + ], + [ + "gene_synonym", + "ycfX" + ] + ], + "dna_sequence": "ATGTATTACGGGTTTGATATTGGTGGAACAAAAATTGCGCTTGGCGTGTTTGATAGCGGTCGGCAGTTGCAGTGGGAAAAGCGGGTGCCGACACCGCGTGACAGCTATGACGCATTTTTAGATGCAGTGTGTGAGCTGGTAGCTGAAGCTGACCAACGTTTTGGCTGTAAAGGTTCTGTCGGCATCGGTATTCCGGGAATGCCGGAAACAGAAGATGGTACGCTGTATGCCGCCAATGTCCCCGCTGCCAGCGGTAAACCGCTGCGTGCCGACCTGAGCGCACGTCTTGATCGCGATGTACGCCTTGATAACGATGCCAACTGTTTTGCCCTTTCAGAAGCCTGGGATGATGAATTTACTCAATATCCACTGGTGATGGGGTTGATTCTCGGCACCGGTGTTGGCGGCGGGCTGATTTTCAACGGCAAACCGATTACCGGTAAAAGCTACATTACCGGCGAGTTTGGCCATATGCGTCTGCCGGTTGATGCGTTAACCATGATGGGGTTGGATTTCCCGTTACGCCGCTGCGGCTGTGGTCAGCATGGCTGCATTGAAAATTATCTGTCTGGTCGCGGTTTTGCGTGGCTGTATCAACACTATTATCATCAACCGTTGCAGGCTCCCGAAATTATTGCGCTTTATGATCAAGGCGATGAGCAGGCAAGGGCGCACGTTGAGCGTTATCTGGATTTATTAGCGGTTTGTCTGGGAAATATCCTGACCATCGTTGACCCTGACCTGGTCGTCATTGGTGGTGGCTTATCGAATTTCCCGGCAATCACAACGCAACTGGCGGACAGGCTGCCTCGTCATCTCTTACCTGTAGCTCGTGTTCCGCGCATTGAACGCGCGCGCCACGGTGATGCGGGAGGAATGCGTGGTGCGGCCTTCCTACATCTAACCGATTAA", + "dna_sequence_length": 912, + "functions": [ + "N-acetyl-D-glucosamine kinase" + ], + "id": "CDS_1097", + "location": [ + [ + "NC_000913", + 1178593, + "+", + 912 + ] + ], + "md5": "19ca26bfa0264e072dd2c14f4352b6f1", + "parent_gene": "", + "protein_md5": "991cf2dec74cee8f23fdedc941c4dbb2", + "protein_translation": "MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLHLTD", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003781" + ], + [ + "gene_synonym", + "ECK1106" + ], + [ + "gene_synonym", + "EcoGene:EG13443" + ], + [ + "gene_synonym", + "GI:308209619" + ], + [ + "gene_synonym", + "GeneID:945687" + ], + [ + "gene_synonym", + "JW1106" + ], + [ + "gene_synonym", + "NP_415638.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75960" + ], + [ + "gene_synonym", + "b1120" + ], + [ + "gene_synonym", + "cobB" + ], + [ + "gene_synonym", + "npdA" + ], + [ + "gene_synonym", + "ycfY" + ] + ], + "dna_sequence": "ATGGAAAAACCAAGAGTACTCGTACTGACAGGGGCAGGAATTTCTGCGGAATCAGGTATTCGTACCTTTCGCGCCGCAGATGGCCTGTGGGAAGAACATCGGGTTGAAGATGTGGCAACGCCGGAAGGTTTCGATCGCGATCCTGAACTGGTGCAAGCGTTTTATAACGCCCGTCGTCGACAGCTGCAGCAGCCAGAAATTCAGCCTAACGCCGCGCATCTTGCGCTGGCTAAACTGCAAGACGCCCTCGGCGATCGCTTTTTGCTGGTGACGCAGAATATCGACAACCTGCATGAACGCGCAGGTAATACCAATGTGATTCATATGCATGGGGAACTGCTGAAAGTGCGTTGTTCACAAAGTGGTCAGGTTCTCGACTGGACAGGAGACGTTACCCCAGAAGATAAATGCCATTGTTGCCAGTTTCCGGCACCCTTGCGCCCGCACGTAGTGTGGTTTGGCGAAATGCCACTCGGCATGGATGAAATTTATATGGCGTTGTCGATGGCCGATATTTTCATTGCCATTGGCACATCCGGGCATGTTTATCCGGCGGCTGGGTTTGTTCACGAAGCGAAACTGCATGGCGCGCACACCGTGGAACTGAATCTTGAACCGAGTCAGGTTGGTAATGAATTTGCCGAGAAATATTACGGCCCGGCAAGCCAGGTGGTGCCTGAGTTTGTTGAAAAGTTGCTGAAGGGATTAAAAGCGGGAAGCATTGCCTGA", + "dna_sequence_length": 729, + "functions": [ + "deacetylase of acs and cheY, chemotaxis regulator" + ], + "id": "CDS_1098", + "location": [ + [ + "NC_000913", + 1179631, + "+", + 729 + ] + ], + "md5": "bf7f108bbc76782f11a67593559cbc2d", + "parent_gene": "", + "protein_md5": "5272721a7539cf8d270315cd97af2def", + "protein_translation": "MEKPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGLKAGSIA", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003784" + ], + [ + "gene_synonym", + "ECK1107" + ], + [ + "gene_synonym", + "EcoGene:EG13444" + ], + [ + "gene_synonym", + "GI:16129084" + ], + [ + "gene_synonym", + "GeneID:945685" + ], + [ + "gene_synonym", + "JW1107" + ], + [ + "gene_synonym", + "NP_415639.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75961" + ], + [ + "gene_synonym", + "b1121" + ], + [ + "gene_synonym", + "ycfZ" + ] + ], + "dna_sequence": "ATGAAAAAATTCATTATACTGCTCAGTTTACTGATACTCCTGCCTCTGACAGCAGCCAGCAAGCCATTAATTCCAATAATGAAGACACTTTTTACGGACGTTACCGGTACTGTACCAGATGCTGAAGAGATCGCGCATAAAGCCGAGCTTTTTCGCCAACAAACGGGAATTGCACCGTTTATTGTGGTTTTACCCGACATTAATAATGAAGCCAGTCTCAGACAAAATGGTAAAGCGATGCTGGCGCATGCGTCATCTTCATTGAGTGATGTAAAAGGAAGTGTTCTGTTACTATTTACTACCCGCGAACCACGGTTAATTATGATCACCAACGGCCAGGTTGAAAGTGGTCTGGACGATAAACATCTCGGCCTTCTGATAGAAAATCACACGCTGGCTTATTTAAATGCAGATCTCTGGTATCAGGGAATCAATAATGCATTGGCTGTTCTACAAGCACAGATATTAAAACAATCGACGCCGCCACTAACGTATTATCCGCATCCAGGACAACAGCATGAAAATGCTCCCCCCGGCAGCACCAACACATTAGGTTTTATCGCCTGGGCTGCGACGTTTATCTTATTTTCCAGGATCTTTTACTACACGACTCGTTTTATTTATGCGTTAAAATTTGCAGTGGCGATGACTATTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATAATAGCTTTGCGATTACCAGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACGATAA", + "dna_sequence_length": 789, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1099", + "location": [ + [ + "NC_000913", + 1181267, + "-", + 789 + ] + ], + "md5": "8ada274f53d4f16c05fd5e584f7c292e", + "parent_gene": "", + "protein_md5": "289bf174466dfcd07a683dc3a02d83ab", + "protein_translation": "MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003786" + ], + [ + "gene_synonym", + "ECK1108" + ], + [ + "gene_synonym", + "EcoGene:EG13445" + ], + [ + "gene_synonym", + "GI:90111216" + ], + [ + "gene_synonym", + "GeneID:945684" + ], + [ + "gene_synonym", + "JW5164" + ], + [ + "gene_synonym", + "NP_415640.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75962" + ], + [ + "gene_synonym", + "b1122" + ], + [ + "gene_synonym", + "ymfA" + ] + ], + "dna_sequence": "ATGAGTCAGGACAGTAAAGTTTTCTTTCGTATATTCCTCGGTATCGGTCTGGTACTGATCCTCATTTCTGTTGTTGTCTTTTATAACCAGTTCACCTATAGCAAAGACGCGATTCATACCGAAGGCGTCATTGTTGATACCGTCTGGCACTCCAGTCATTCTCATCGCACGGGTAAAGATGGTTCGTGGTATCCCGTCGTTGCCTTTCGACCGACGCCAGATTACACGCTAATTTTCAATTCGAGTATCGGCAGCGATTTTTATGAAGACAGCGAAGGCGATAAAGTTAATGTTTATTATTCTCCCGGGCATCCTGAAAAGGCTGAGATAAATAACCCGTGGGTTAATTTTTTTAAATGGGGGTTTATCGGCATTATGGGCGTTATTTTTATCGCCGTCGGTTTATTAATAAGTATGCCCTCCTCTAAAAAATCACGCAGGAAACGGAAGTCCCGCCCATGA", + "dna_sequence_length": 462, + "functions": [ + "DUF3592 family inner membrane protein" + ], + "id": "CDS_1100", + "location": [ + [ + "NC_000913", + 1181725, + "-", + 462 + ] + ], + "md5": "581fde58abca52f43ac50ec4b9be1a51", + "parent_gene": "", + "protein_md5": "d85b3bfd79fc3d04d5b29c206f3b0408", + "protein_translation": "MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003789" + ], + [ + "gene_synonym", + "ECK1109" + ], + [ + "gene_synonym", + "EcoGene:EG10752" + ], + [ + "gene_synonym", + "GI:16129086" + ], + [ + "gene_synonym", + "GeneID:945682" + ], + [ + "gene_synonym", + "JW1109" + ], + [ + "gene_synonym", + "NP_415641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK9" + ], + [ + "gene_synonym", + "b1123" + ], + [ + "gene_synonym", + "potD" + ] + ], + "dna_sequence": "ATGAAAAAATGGTCACGCCACCTGCTCGCGGCGGGTGCTCTGGCACTGGGCATGAGCGCCGCTCACGCCGATGACAACAACACGCTGTATTTCTACAACTGGACCGAGTACGTGCCGCCAGGACTGCTTGAACAGTTCACCAAAGAAACCGGTATTAAGGTTATCTATTCGACTTACGAGTCGAACGAAACCATGTACGCCAAGCTGAAAACATACAAAGACGGTGCCTATGATCTGGTGGTTCCTTCAACCTATTACGTTGATAAAATGCGTAAAGAAGGGATGATCCAGAAGATCGACAAGTCGAAGTTAACAAACTTCAGCAATCTCGATCCAGACATGCTCAACAAGCCTTTTGACCCGAATAACGACTACTCCATTCCGTATATCTGGGGTGCGACGGCGATTGGTGTTAACGGTGATGCGGTGGATCCGAAATCTGTCACCAGCTGGGCCGATCTGTGGAAGCCAGAGTACAAAGGCAGCCTGCTGTTGACCGACGATGCCCGTGAAGTGTTCCAGATGGCGCTGCGTAAGCTGGGCTACTCCGGTAACACCACCGATCCGAAAGAGATTGAAGCTGCATATAACGAGCTGAAAAAACTGATGCCAAACGTGGCAGCCTTTAACTCCGATAACCCGGCGAACCCGTACATGGAAGGCGAAGTTAACCTCGGCATGATCTGGAACGGTTCTGCTTTCGTTGCACGCCAGGCGGGTACGCCAATTGACGTGGTGTGGCCGAAAGAAGGCGGCATTTTCTGGATGGACAGCCTGGCGATCCCGGCAAATGCCAAAAACAAAGAAGGCGCGCTGAAATTGATCAACTTCCTGCTGCGCCCGGATGTGGCAAAACAGGTTGCTGAAACTATCGGTTATCCAACGCCAAACCTTGCGGCGCGTAAGCTGTTAAGTCCAGAAGTGGCGAACGATAAAACACTCTACCCGGATGCTGAAACCATTAAAAATGGCGAATGGCAGAATGACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAA", + "dna_sequence_length": 1047, + "functions": [ + "spermidine/putrescine ABC transporter periplasmic binding protein" + ], + "id": "CDS_1101", + "location": [ + [ + "NC_000913", + 1182829, + "-", + 1047 + ] + ], + "md5": "c76a85351c639f1beeca3a0f169fb875", + "parent_gene": "", + "protein_md5": "c3f307642155ebe32b4c91383e8cadac", + "protein_translation": "MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAGR", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003791" + ], + [ + "gene_synonym", + "ECK1110" + ], + [ + "gene_synonym", + "EcoGene:EG10751" + ], + [ + "gene_synonym", + "GI:16129087" + ], + [ + "gene_synonym", + "GeneID:945691" + ], + [ + "gene_synonym", + "JW1110" + ], + [ + "gene_synonym", + "NP_415642.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK6" + ], + [ + "gene_synonym", + "b1124" + ], + [ + "gene_synonym", + "potC" + ] + ], + "dna_sequence": "ATGATCGGTCGACTGCTTCGCGGCGGTTTTATGACCGCTATCTACGCGTACCTGTATATCCCAATCATTATTTTGATTGTGAACTCCTTTAACAGCTCGCGCTTTGGCATCAACTGGCAGGGCTTTACCACCAAATGGTATAGCCTGCTGATGAACAACGACAGCCTGTTACAGGCAGCGCAGCATTCACTAACAATGGCGGTGTTTTCGGCGACGTTTGCTACGCTTATCGGTTCACTGACGGCAGTTGCGCTGTACCGTTATCGCTTTCGTGGTAAGCCGTTCGTTAGCGGAATGCTGTTTGTGGTGATGATGTCACCAGATATCGTGATGGCGATTTCGCTGCTGGTGCTGTTTATGCTGCTGGGTATTCAGCTTGGCTTCTGGTCGCTGCTGTTCTCGCATATCACCTTCTGCCTGCCATTTGTGGTGGTGACGGTGTATTCGCGCCTGAAAGGTTTTGACGTGCGAATGCTGGAAGCGGCGAAAGATCTCGGTGCCAGCGAATTTACCATTCTGCGAAAAATCATTCTGCCACTGGCAATGCCAGCGGTGGCGGCGGGCTGGGTGTTAAGCTTTACCCTGTCGATGGACGATGTGGTAGTTTCTTCGTTCGTCACCGGACCAAGTTATGAAATTCTGCCGTTAAAAATTTATTCGATGGTCAAAGTCGGCGTATCGCCGGAAGTTAACGCGCTGGCAACCATATTACTGGTGCTGTCGCTGGTGATGGTTATTGCCAGCCAGCTTATTGCTCGTGATAAAACGAAAGGTAACACAGGGGACGTTAAATGA", + "dna_sequence_length": 795, + "functions": [ + "spermidine/putrescine ABC transporter permease" + ], + "id": "CDS_1102", + "location": [ + [ + "NC_000913", + 1183620, + "-", + 795 + ] + ], + "md5": "4162c5d61d73d8ce49aed5474bbbf22a", + "parent_gene": "", + "protein_md5": "2da4f50be2cee1134a6ff6ffaa0c724f", + "protein_translation": "MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003794" + ], + [ + "gene_synonym", + "ECK1111" + ], + [ + "gene_synonym", + "EcoGene:EG10750" + ], + [ + "gene_synonym", + "GI:162135921" + ], + [ + "gene_synonym", + "GeneID:945692" + ], + [ + "gene_synonym", + "JW1111" + ], + [ + "gene_synonym", + "NP_415643.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK4" + ], + [ + "gene_synonym", + "b1125" + ], + [ + "gene_synonym", + "potB" + ] + ], + "dna_sequence": "GTGATTGTCACTATTGTCGGTTGGCTTGTGTTGTTTGTCTTTCTGCCCAACCTGATGATCATTGGCACCAGCTTTTTGACCCGCGACGACGCCAGTTTTGTCAAAATGGTCTTTACGCTGGATAACTACACGCGTCTGCTCGATCCGCTCTATTTTGAAGTGCTATTGCACTCGCTGAATATGGCGCTGATCGCCACCCTCGCCTGCCTGGTGCTGGGCTACCCGTTTGCCTGGTTTCTGGCGAAGTTGCCACACAAGGTGCGTCCGCTGCTGCTGTTTCTGCTGATTGTTCCGTTCTGGACCAACTCATTAATTCGTATCTACGGGCTGAAAATTTTCCTCAGCACCAAAGGCTATCTCAACGAGTTTTTGCTCTGGCTGGGCGTTATCGACACACCAATCCGTATCATGTTCACGCCCAGTGCGGTGATTATCGGTCTGGTTTACATTCTGCTGCCGTTTATGGTGATGCCGCTGTACTCCAGTATCGAAAAACTGGATAAGCCGTTGCTTGAGGCGGCGCGCGATCTCGGTGCCAGCAAGTTACAGACTTTTATCCGTATCATTATTCCACTGACGATGCCGGGAATTATTGCCGGATGTCTGCTGGTGATGCTGCCAGCGATGGGCCTGTTCTATGTATCCGACCTGATGGGCGGTGCGAAAAACCTGCTGATCGGTAACGTCATCAAGGTCCAGTTCCTTAATATTCGTGACTGGCCGTTTGGTGCAGCTACCAGCATTACGCTGACTATCGTAATGGGCCTGATGTTGCTGGTTTACTGGCGCGCTTCTCGTTTGCTGAATAAGAAGGTGGAACTCGAATGA", + "dna_sequence_length": 828, + "functions": [ + "spermidine/putrescine ABC transporter permease" + ], + "id": "CDS_1103", + "location": [ + [ + "NC_000913", + 1184444, + "-", + 828 + ] + ], + "md5": "9b613b63f31c6f5922116f5ae060356a", + "parent_gene": "", + "protein_md5": "7aefa8b335a998c5135c5aad7cc9855d", + "protein_translation": "MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003796" + ], + [ + "gene_synonym", + "ECK1112" + ], + [ + "gene_synonym", + "EcoGene:EG10749" + ], + [ + "gene_synonym", + "GI:16129089" + ], + [ + "gene_synonym", + "GeneID:946323" + ], + [ + "gene_synonym", + "JW1112" + ], + [ + "gene_synonym", + "NP_415644.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69874" + ], + [ + "gene_synonym", + "b1126" + ], + [ + "gene_synonym", + "potA" + ] + ], + "dna_sequence": "ATGGGACAGAGTAAAAAATTGAATAAACAACCGAGTTCGCTTTCACCGCTGGTGCAATTGGCGGGAATTCGCAAATGCTTTGATGGTAAAGAGGTCATTCCCCAGCTGGATCTGACTATCAACAATGGCGAGTTCCTCACGCTGCTTGGCCCTTCTGGCTGCGGTAAAACAACCGTTCTTCGCCTGATTGCAGGTCTGGAAACTGTTGATTCCGGACGCATCATGCTGGATAACGAGGACATCACCCACGTTCCGGCGGAAAACCGCTATGTGAACACTGTTTTCCAAAGCTACGCACTTTTCCCCCACATGACCGTGTTCGAAAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGCTGCTGAAATTACGCCCCGCGTGATGGAAGCCCTGCGGATGGTGCAGTTGGAAACCTTCGCTCAACGCAAACCGCATCAGCTCTCTGGTGGTCAACAGCAACGCGTCGCCATTGCTCGCGCGGTGGTTAACAAGCCTCGTCTGTTGTTGCTGGATGAGTCGCTCTCAGCGCTGGATTACAAACTGCGTAAGCAAATGCAGAACGAGCTGAAAGCGTTACAGCGTAAGCTTGGCATTACATTCGTCTTTGTGACTCACGACCAGGAAGAAGCACTCACCATGTCAGACAGGATTGTGGTGATGCGCGATGGTCGCATTGAGCAAGACGGCACGCCGCGTGAAATCTACGAAGAGCCGAAAAACCTGTTTGTTGCCGGCTTCATTGGCGAAATCAATATGTTTAACGCCACTGTCATCGAACGTCTAGACGAGCAGCGCGTACGCGCCAACGTTGAAGGCCGCGAATGTAATATCTACGTTAACTTCGCCGTTGAACCGGGGCAAAAACTGCATGTTCTGCTGCGCCCGGAAGACTTACGTGTTGAAGAGATTAACGACGACAACCACGCTGAAGGGCTGATTGGTTACGTTCGCGAGCGTAACTACAAAGGCATGACGCTGGAGTCGGTTGTTGAACTGGAAAATGGCAAGATGGTGATGGTCAGCGAATTCTTCAATGAAGACGATCCTGACTTTGACCACTCTCTCGACCAAAAAATGGCCATTAATTGGGTAGAAAGCTGGGAGGTCGTACTGGCTGATGAAGAACACAAGTAA", + "dna_sequence_length": 1137, + "functions": [ + "spermidine/putrescine ABC transporter ATPase" + ], + "id": "CDS_1104", + "location": [ + [ + "NC_000913", + 1185594, + "-", + 1137 + ] + ], + "md5": "349ec8e621d483240048eb6f57f136c2", + "parent_gene": "", + "protein_md5": "8298de0c0cef9ebec11bfe5447380d15", + "protein_translation": "MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003800" + ], + [ + "gene_synonym", + "ECK1113" + ], + [ + "gene_synonym", + "EcoGene:EG11549" + ], + [ + "gene_synonym", + "GI:16129090" + ], + [ + "gene_synonym", + "GeneID:946333" + ], + [ + "gene_synonym", + "JW1113" + ], + [ + "gene_synonym", + "NP_415645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29745" + ], + [ + "gene_synonym", + "b1127" + ], + [ + "gene_synonym", + "pepT" + ] + ], + "dna_sequence": "ATGGATAAACTACTTGAGCGATTTTTGAACTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAGTGAGAAGGGCACTTTGATGGCGACGTTACCGGCTAACGTCCCTGGCGATATCCCGGCGATTGGCTTTATTTCTCATGTGGATACCTCACCGGATTGCAGCGGCAAAAATGTGAATCCGCAAATTGTTGAAAACTATCGCGGTGGCGATATTGCGCTGGGTATCGGCGATGAAGTTTTATCACCGGTTATGTTCCCGGTGCTGCATCAGCTACTGGGTCAGACGCTGATTACCACCGATGGTAAAACCTTGTTAGGTGCCGATGACAAAGCAGGTATTGCAGAAATCATGACCGCGCTGGCGGTATTGCAACAGAAAAAAATTCCGCATGGTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGGGCACGGCGAAAGGAGTGATGGTAAATGCGCTGTCGCTGGCGGCACGTATTCATGCGGAAGTTCCGGCGGATGAAAGCCCGGAAATGACAGAAGGCTATGAAGGTTTCTATCATCTGGCGAGCATGAAAGGCACCGTTGAACGGGCCGATATGCACTACATCATCCGTGATTTCGACCGTAAACAGTTTGAAGCGCGTAAACGTAAAATGATGGAGATCGCCAAAAAAGTGGGCAAAGGGTTACATCCTGATTGCTACATTGAACTGGTGATTGAAGACAGTTACTACAATATGCGCGAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCCGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAA", + "dna_sequence_length": 1227, + "functions": [ + "peptidase T" + ], + "id": "CDS_1105", + "location": [ + [ + "NC_000913", + 1185844, + "+", + 1227 + ] + ], + "md5": "f2152143388dadaf295088edf4c41c94", + "parent_gene": "", + "protein_md5": "cc539b5eaec626aa7132f5766adb2d13", + "protein_translation": "MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKIPHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAQRK", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003802" + ], + [ + "gene_synonym", + "ECK1114" + ], + [ + "gene_synonym", + "EcoGene:EG11430" + ], + [ + "gene_synonym", + "GI:90111217" + ], + [ + "gene_synonym", + "GeneID:945391" + ], + [ + "gene_synonym", + "JW1114" + ], + [ + "gene_synonym", + "NP_415646.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27431" + ], + [ + "gene_synonym", + "b1128" + ], + [ + "gene_synonym", + "roxA" + ], + [ + "gene_synonym", + "ycfD" + ] + ], + "dna_sequence": "ATGGAATACCAACTCACTCTTAACTGGCCCGATTTTCTTGAACGTCACTGGCAGAAACGCCCGGTGGTGTTAAAACGCGGCTTTAATAATTTTATTGACCCGATCTCTCCAGACGAGTTGGCGGGTCTGGCGATGGAAAGCGAAGTTGACAGTCGACTGGTCAGTCACCAGGATGGCAAATGGCAGGTCAGCCACGGCCCGTTCGAAAGCTACGATCATCTCGGTGAAACCAACTGGTCATTACTGGTACAGGCAGTGAACCACTGGCATGAGCCGACCGCCGCGCTGATGCGACCGTTCCGTGAACTACCGGACTGGCGTATTGATGATCTGATGATTTCTTTTTCTGTACCCGGCGGCGGCGTCGGCCCGCATCTCGATCAGTACGACGTGTTTATCATTCAGGGTACCGGACGTCGTCGCTGGCGAGTGGGCGAAAAGCTGCAAATGAAACAGCACTGCCCACATCCGGATCTGTTACAGGTCGATCCGTTCGAAGCCATCATCGATGAAGAGCTGGAGCCTGGTGATATTCTTTATATTCCGCCAGGATTCCCGCATGAAGGCTACGCGCTGGAAAATGCGATGAACTATTCCGTGGGCTTTCGCGCGCCAAATACGCGGGAACTGATTAGTGGATTTGCCGATTATGTGCTGCAACGTGAACTGGGCGGCAACTACTACAGCGATCCGGATGTTCCACCTCGCGCTCATCCTGCGGATGTTCTGCCGCAAGAGATGGATAAACTGCGTGAGATGATGCTCGAATTGATCAACCAGCCGGAACACTTTAAGCAATGGTTTGGCGAGTTTATATCCCAGTCACGTCATGAACTGGATATCGCGCCGCCAGAGCCGCCTTATCAGCCGGATGAAATCTACGATGCGCTGAAACAAGGTGAAGTGCTGGTGCGCCTGGGTGGTCTGCGCGTATTGCGCATTGGCGACGACGTGTATGCCAATGGTGAGAAGATCGATTCCCCGCACCGTCCGGCACTGGATGCACTCGCCAGCAACATTGCGCTGACTGCGGAGAATTTTGGCGATGCGCTGGAAGATCCGTCATTCCTCGCGATGCTCGCGGCGCTGGTCAATAGCGGGTATTGGTTCTTCGAAGGGTAA", + "dna_sequence_length": 1122, + "functions": [ + "50S ribosomal protein L16 arginine hydroxylase", + "2-oxoglutarate oxygenase" + ], + "id": "CDS_1106", + "location": [ + [ + "NC_000913", + 1188240, + "-", + 1122 + ] + ], + "md5": "a9172d3aa1c572272de845d23e76cde7", + "parent_gene": "", + "protein_md5": "0a0d0a63de134b3aebe1bc2f9c027855", + "protein_translation": "MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG", + "protein_translation_length": 373, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003805" + ], + [ + "gene_synonym", + "ECK1115" + ], + [ + "gene_synonym", + "EcoGene:EG10732" + ], + [ + "gene_synonym", + "GI:16129092" + ], + [ + "gene_synonym", + "GeneID:946326" + ], + [ + "gene_synonym", + "JW1115" + ], + [ + "gene_synonym", + "NP_415647.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23837" + ], + [ + "gene_synonym", + "b1129" + ], + [ + "gene_synonym", + "phoQ" + ] + ], + "dna_sequence": "ATGAAAAAATTACTGCGTCTTTTTTTCCCGCTCTCGCTGCGGGTACGTTTTCTGTTGGCAACGGCAGCGGTAGTACTGGTGCTTTCGCTTGCCTACGGAATGGTCGCGCTGATCGGTTATAGCGTCAGTTTCGATAAAACTACGTTTCGGCTGTTACGTGGCGAGAGCAATCTGTTCTATACCCTTGCGAAGTGGGAAAACAATAAGTTGCATGTCGAGTTACCCGAAAATATCGACAAGCAAAGCCCCACCATGACGCTAATTTATGATGAGAACGGGCAGCTTTTATGGGCGCAACGTGACGTGCCCTGGCTGATGAAGATGATCCAGCCTGACTGGCTGAAATCGAATGGTTTTCATGAAATTGAAGCGGATGTTAACGATACCAGCCTCTTGCTGAGTGGAGATCATTCGATACAGCAACAGTTGCAGGAAGTGCGGGAAGATGATGACGACGCGGAGATGACCCACTCGGTGGCAGTAAACGTCTACCCGGCAACATCGCGGATGCCAAAATTAACCATTGTGGTGGTGGATACCATTCCGGTGGAGCTAAAAAGTTCCTATATGGTCTGGAGCTGGTTTATCTATGTGCTCTCAGCCAATCTGCTGTTAGTGATCCCGCTGCTGTGGGTCGCCGCCTGGTGGAGTTTACGCCCCATCGAAGCCCTGGCAAAAGAAGTCCGCGAACTGGAAGAACATAACCGCGAATTGCTCAATCCAGCCACAACGCGAGAACTGACCAGTCTGGTACGAAACCTGAACCGATTGTTAAAAAGTGAACGCGAACGTTACGACAAATACCGTACGACGCTCACCGACCTGACCCATAGTCTGAAAACGCCACTGGCGGTGCTGCAAAGTACGCTGCGTTCTCTGCGTAGTGAAAAGATGAGCGTCAGTGATGCTGAGCCGGTAATGCTGGAGCAAATCAGCCGCATTTCACAGCAAATTGGCTACTACCTGCATCGTGCCAGTATGCGCGGCGGGACATTGCTCAGCCGCGAGCTGCATCCGGTCGCCCCACTGCTGGACAATCTCACCTCAGCGCTGAACAAAGTGTATCAACGCAAAGGGGTCAATATCTCTCTCGATATTTCGCCAGAGATCAGCTTTGTCGGTGAGCAGAACGATTTTGTCGAGGTGATGGGCAACGTGCTGGATAATGCCTGTAAATATTGCCTCGAGTTTGTCGAAATTTCTGCAAGGCAAACCGACGAGCATCTCTATATTGTGGTCGAGGATGATGGCCCCGGTATTCCATTAAGCAAGCGAGAGGTCATTTTCGACCGTGGTCAACGGGTTGATACTTTACGCCCTGGGCAAGGTGTAGGGCTGGCGGTAGCCCGCGAAATCACCGAGCAATATGAGGGTAAAATCGTCGCCGGAGAGAGCATGCTGGGCGGTGCGCGGATGGAGGTGATTTTTGGTCGCCAGCATTCTGCGCCGAAAGATGAATAA", + "dna_sequence_length": 1461, + "functions": [ + "sensory histidine kinase in two-component regulatory system with PhoP" + ], + "id": "CDS_1107", + "location": [ + [ + "NC_000913", + 1189776, + "-", + 1461 + ] + ], + "md5": "8d7fbe3ddf844303aa9fe43c7f2cc3e0", + "parent_gene": "", + "protein_md5": "22e04226a9dc62b86f8c48c9d68a8e9c", + "protein_translation": "MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE", + "protein_translation_length": 486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003807" + ], + [ + "gene_synonym", + "ECK1116" + ], + [ + "gene_synonym", + "EcoGene:EG10731" + ], + [ + "gene_synonym", + "GI:16129093" + ], + [ + "gene_synonym", + "GeneID:945697" + ], + [ + "gene_synonym", + "JW1116" + ], + [ + "gene_synonym", + "NP_415648.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23836" + ], + [ + "gene_synonym", + "b1130" + ], + [ + "gene_synonym", + "phoP" + ] + ], + "dna_sequence": "ATGCGCGTACTGGTTGTTGAAGACAATGCGTTGTTACGTCACCACCTTAAAGTTCAGATTCAGGATGCTGGTCATCAGGTCGATGACGCAGAAGATGCCAAAGAAGCCGATTATTATCTCAATGAACATATACCGGATATTGCGATTGTCGATCTCGGATTGCCAGACGAGGACGGTCTGTCACTGATTCGCCGCTGGCGTAGCAACGATGTTTCACTGCCGATTCTGGTATTAACCGCCCGTGAAAGCTGGCAGGACAAAGTCGAAGTATTAAGTGCCGGTGCTGATGATTATGTGACTAAACCGTTTCATATTGAAGAGGTGATGGCGCGAATGCAGGCATTAATGCGGCGTAATAGCGGTCTGGCTTCACAGGTCATTTCGCTCCCCCCGTTTCAGGTTGATCTCTCTCGCCGTGAATTATCTATTAATGACGAAGTGATCAAACTGACCGCGTTCGAATACACTATTATGGAAACGTTGATACGCAATAATGGCAAAGTGGTCAGCAAAGATTCGTTAATGCTCCAACTCTATCCGGATGCGGAGCTGCGGGAAAGCCATACCATTGATGTACTGATGGGACGTCTGCGCAAAAAAATTCAGGCACAATATCCCCAAGAAGTGATTACCACCGTTCGCGGCCAGGGCTATCTGTTCGAATTGCGCTGA", + "dna_sequence_length": 672, + "functions": [ + "response regulator in two-component regulatory system with PhoQ" + ], + "id": "CDS_1108", + "location": [ + [ + "NC_000913", + 1190447, + "-", + 672 + ] + ], + "md5": "bd60f258d89d8b06ef13c0a4b5ade7e3", + "parent_gene": "", + "protein_md5": "df52ec73cacdfbba1e905ec5b1e1011e", + "protein_translation": "MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003810" + ], + [ + "gene_synonym", + "ECK1117" + ], + [ + "gene_synonym", + "EcoGene:EG11314" + ], + [ + "gene_synonym", + "GI:16129094" + ], + [ + "gene_synonym", + "GeneID:945695" + ], + [ + "gene_synonym", + "JW1117" + ], + [ + "gene_synonym", + "NP_415649.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB89" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "b1131" + ], + [ + "gene_synonym", + "purB" + ] + ], + "dna_sequence": "ATGGAATTATCCTCACTGACCGCCGTTTCCCCTGTCGATGGACGCTACGGCGATAAAGTCAGCGCGCTGCGCGGGATTTTCAGCGAATATGGTTTGCTGAAATTCCGTGTACAAGTTGAAGTACGTTGGCTGCAAAAACTGGCCGCGCACGCAGCGATCAAGGAAGTTCCTGCTTTTGCTGCCGACGCAATCGGTTACCTTGATGCAATCGTCGCCAGTTTCAGCGAAGAAGATGCGGCGCGCATCAAAACTATCGAGCGTACCACTAACCACGACGTTAAAGCGGTTGAGTATTTCCTGAAAGAAAAAGTGGCGGAGATCCCGGAACTGCACGCGGTTTCTGAATTCATCCACTTTGCCTGTACTTCGGAAGATATCAATAACCTCTCCCACGCATTAATGCTGAAAACCGCGCGTGATGAAGTGATCCTGCCATACTGGCGTCAACTGATTGATGGCATTAAAGATCTCGCCGTTCAGTATCGCGATATCCCGCTGCTGTCTCGTACCCACGGTCAGCCAGCCACGCCGTCAACCATCGGTAAAGAGATGGCAAACGTCGCCTACCGTATGGAGCGCCAGTACCGCCAGCTTAACCAGGTGGAGATCCTCGGCAAAATCAACGGCGCGGTCGGTAACTATAACGCCCACATCGCCGCTTACCCGGAAGTTGACTGGCATCAGTTCAGCGAAGAGTTCGTCACCTCGCTGGGTATTCAGTGGAACCCGTACACCACCCAGATCGAACCGCACGACTACATTGCCGAACTGTTTGATTGCGTTGCGCGCTTCAACACTATTCTGATCGACTTTGACCGTGACGTCTGGGGTTATATCGCCCTTAACCACTTCAAACAGAAAACCATTGCTGGTGAGATTGGTTCTTCCACCATGCCGCATAAAGTTAACCCGATCGACTTCGAAAACTCCGAAGGGAATCTGGGCCTTTCCAACGCGGTATTGCAGCATCTGGCAAGCAAACTGCCGGTTTCCCGCTGGCAGCGTGACCTGACCGACTCTACCGTGCTGCGTAACCTCGGCGTGGGTATCGGTTATGCCTTGATTGCATATCAATCCACCCTGAAAGGCGTGAGCAAACTGGAAGTGAACCGTGACCATCTGCTGGATGAACTGGATCACAACTGGGAAGTGCTGGCTGAACCAATCCAGACAGTTATGCGTCGCTATGGCATCGAAAAACCGTACGAGAAGCTGAAAGAGCTGACTCGCGGTAAGCGCGTTGACGCCGAAGGCATGAAGCAGTTTATCGATGGTCTGGCGTTGCCAGAAGAAGAGAAAGCCCGCCTGAAAGCGATGACGCCGGCTAACTATATTGGTCGAGCTATCACGATGGTTGATGAGCTGAAATAA", + "dna_sequence_length": 1371, + "functions": [ + "adenylosuccinate lyase" + ], + "id": "CDS_1109", + "location": [ + [ + "NC_000913", + 1191986, + "-", + 1371 + ] + ], + "md5": "ce5f3b891fc6350860719dbd9a4203ea", + "parent_gene": "", + "protein_md5": "fb9a8b640c464a4aa7ca8951cb3a41f7", + "protein_translation": "MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK", + "protein_translation_length": 456, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003812" + ], + [ + "gene_synonym", + "ECK1118" + ], + [ + "gene_synonym", + "EcoGene:EG11345" + ], + [ + "gene_synonym", + "GI:16129095" + ], + [ + "gene_synonym", + "GeneID:945693" + ], + [ + "gene_synonym", + "JW5165" + ], + [ + "gene_synonym", + "NP_415650.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25746" + ], + [ + "gene_synonym", + "b1132" + ], + [ + "gene_synonym", + "hflD" + ], + [ + "gene_synonym", + "hslZ" + ], + [ + "gene_synonym", + "ycfC" + ] + ], + "dna_sequence": "GTGGCAAAGAATTACTATGACATCACCCTCGCCCTGGCCGGTATTTGTCAGTCGGCACGCCTGGTGCAACAACTCGCTCACCAGGGGCATTGTGATGCCGATGCGCTACACGTCTCACTCAACAGTATTATTGATATGAACCCCAGCTCGACGCTGGCGGTTTTTGGCGGTAGCGAAGCCAACCTGCGCGTCGGGCTGGAAACCCTGCTCGGCGTGCTCAATGCCAGCAGTCGCCAGGGCTTAAACGCCGAATTAACCCGCTACACACTCAGCTTGATGGTGCTTGAGCGCAAACTCTCCTCAGCGAAAGGCGCGCTCGACACTCTGGGCAACCGGATCAACGGCCTGCAACGCCAGCTCGAACACTTCGATTTACAGTCCGAAACGCTGATGAGCGCGATGGCTGCTATCTATGTTGATGTGATTAGCCCGCTTGGCCCGCGCATTCAGGTCACCGGTTCCCCTGCTGTACTGCAAAGCCCACAAGTGCAGGCGAAAGTTCGCGCAACCCTGCTGGCAGGCATTCGCGCCGCCGTGCTCTGGCACCAGGTCGGCGGCGGACGTCTGCAACTGATGTTTTCTCGTAATCGCCTGACCACTCAGGCAAAACAAATTCTTGCTCATTTAACCCCGGAGTTGTGA", + "dna_sequence_length": 642, + "functions": [ + "putative lysogenization regulator" + ], + "id": "CDS_1110", + "location": [ + [ + "NC_000913", + 1192631, + "-", + 642 + ] + ], + "md5": "beb4937c24f33accc9aecbe8696f1c8d", + "parent_gene": "", + "protein_md5": "88da9e16b8cd01cb704a20bb0cdb300f", + "protein_translation": "MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003815" + ], + [ + "gene_synonym", + "ECK1119" + ], + [ + "gene_synonym", + "EcoGene:EG11344" + ], + [ + "gene_synonym", + "GI:90111218" + ], + [ + "gene_synonym", + "GeneID:945690" + ], + [ + "gene_synonym", + "JW1119" + ], + [ + "gene_synonym", + "NP_415651.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25745" + ], + [ + "gene_synonym", + "asuE" + ], + [ + "gene_synonym", + "b1133" + ], + [ + "gene_synonym", + "mnmA" + ], + [ + "gene_synonym", + "trmU" + ], + [ + "gene_synonym", + "ycfB" + ] + ], + "dna_sequence": "ATGTCTGAAACCGCAAAAAAAGTAATCGTCGGCATGTCCGGCGGTGTCGATTCCTCCGTTTCTGCCTGGCTGTTGCAACAACAGGGATATCAGGTCGAAGGCCTGTTTATGAAGAACTGGGAAGAAGACGACGGTGAGGAATATTGCACAGCGGCAGCGGATCTGGCTGATGCCCAGGCTGTCTGCGACAAGCTCGGCATTGAACTGCACACCGTTAACTTTGCTGCCGAGTACTGGGACAACGTCTTCGAACTGTTCCTTGCCGAATATAAAGCCGGTCGCACGCCGAATCCGGATATTCTGTGCAACAAAGAGATCAAATTTAAAGCCTTCCTCGAATTTGCCGCCGAAGATTTAGGTGCCGATTATATCGCTACCGGTCATTACGTACGTCGGGCCGATGTCGATGGCAAGAGCCGCCTGCTGCGTGGTCTGGACAGCAATAAAGACCAGAGCTACTTCCTTTATACGCTCAGCCATGAGCAGATTGCGCAAAGCCTGTTCCCGGTCGGCGAACTGGAAAAACCGCAGGTGCGTAAGATTGCTGAAGATCTTGGTCTGGTCACCGCGAAGAAAAAAGACTCTACCGGCATTTGCTTCATTGGCGAACGTAAATTCCGCGAGTTCCTGGGCCGTTATCTCCCGGCGCAACCGGGCAAAATCATTACCGTCGATGGCGATGAAATTGGTGAGCACCAGGGGCTGATGTATCACACTCTCGGTCAGCGTAAAGGTCTGGGTATCGGTGGCACCAAAGAAGGTACCGAAGAACCGTGGTATGTGGTGGACAAAGACGTCGAAAACAACATTCTGGTTGTCGCTCAGGGCCATGAACACCCGCGGCTGATGTCTGTCGGGTTGATTGCCCAGCAGTTGCACTGGGTCGATCGCGAACCATTCACCGGCACTATGCGTTGCACGGTAAAAACCCGCTATCGCCAGACCGATATCCCTTGCACCGTCAAGGCGCTGGACGATGATCGCATTGAAGTGATTTTCGATGAACCGGTTGCCGCCGTGACGCCGGGCCAGTCTGCCGTCTTCTATAACGGTGAAGTGTGCCTCGGTGGCGGTATTATTGAGCAGCGTCTGCCGCTGCCGGTCTGA", + "dna_sequence_length": 1107, + "functions": [ + "tRNA(Gln,Lys,Glu) U34 2-thiouridylase" + ], + "id": "CDS_1111", + "location": [ + [ + "NC_000913", + 1193773, + "-", + 1107 + ] + ], + "md5": "9d34fbb5ad7eae5a04f7144d11b845b9", + "parent_gene": "", + "protein_md5": "8f6df4cbac1e08437732c7f3ec5a4192", + "protein_translation": "MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003818" + ], + [ + "gene_synonym", + "ECK1120" + ], + [ + "gene_synonym", + "EcoGene:EG13446" + ], + [ + "gene_synonym", + "GI:16129097" + ], + [ + "gene_synonym", + "GeneID:945689" + ], + [ + "gene_synonym", + "JW1120" + ], + [ + "gene_synonym", + "NP_415652.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEI6" + ], + [ + "gene_synonym", + "b1134" + ], + [ + "gene_synonym", + "nudJ" + ], + [ + "gene_synonym", + "ymfB" + ] + ], + "dna_sequence": "ATGTTTAAACCGCACGTTACCGTTGCTTGCGTGGTGCACGCAGAAGGCAAATTTTTAGTCGTTGAAGAGACGATTAATGGTAAAGCGTTATGGAACCAACCTGCCGGGCATCTGGAAGCCGATGAAACCTTAGTGGAAGCCGCCGCCCGTGAACTGTGGGAAGAAACCGGCATCAGCGCGCAGCCGCAACACTTTATTCGTATGCATCAGTGGATTGCGCCAGATAAAACGCCGTTTTTGCGTTTCCTCTTTGCCATTGAGCTTGAGCAAATATGCCCGACCCAGCCTCATGACAGCGATATCGACTGCTGCCGTTGGGTCAGCGCCGAAGAAATTTTACAGGCGTCAAATCTTCGTTCGCCGCTGGTGGCGGAAAGTATTCGTTGTTATCAAAGCGGGCAACGTTATCCGCTGGAGATGATTGGCGATTTTAACTGGCCTTTTACAAAGGGTGTCATCTAA", + "dna_sequence_length": 462, + "functions": [ + "bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase" + ], + "id": "CDS_1112", + "location": [ + [ + "NC_000913", + 1194288, + "-", + 462 + ] + ], + "md5": "d3fc241df3f0cdef9e57ba3f06e060cd", + "parent_gene": "", + "protein_md5": "307e4dafc622b419abd71db1a90ceebe", + "protein_translation": "MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003820" + ], + [ + "gene_synonym", + "ECK1121" + ], + [ + "gene_synonym", + "EcoGene:EG13447" + ], + [ + "gene_synonym", + "GI:162135898" + ], + [ + "gene_synonym", + "GeneID:945701" + ], + [ + "gene_synonym", + "JW1121" + ], + [ + "gene_synonym", + "NP_415653.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75966" + ], + [ + "gene_synonym", + "b1135" + ], + [ + "gene_synonym", + "rluE" + ], + [ + "gene_synonym", + "ymfC" + ] + ], + "dna_sequence": "ATGCGGCAATTCATAATCTCTGAAAATACCATGCAAAAAACTTCTTTTAGAAATCACCAGGTTAAGCGATTCAGCTCGCAACGTTCTACCAGGCGTAAACCTGAAAACCAGCCCACGCGTGTGATCCTGTTCAATAAACCCTACGATGTTCTTCCGCAGTTCACCGATGAAGCCGGACGCAAAACATTAAAAGAATTCATCCCGGTTCAGGGTGTTTATGCAGCAGGTCGCCTTGACCGCGATAGCGAAGGGTTGCTGGTGCTGACCAATAACGGCGCGTTGCAGGCGCGTTTAACCCAGCCGGGTAAACGCACCGGAAAAATCTATTATGTGCAGGTGGAAGGTATTCCCACACAAGACGCACTTGAAGCCTTGCGCAATGGCGTAACCTTAAATGATGGCCCTACCCTGCCCGCCGGCGCGGAGCTGGTTGACGAACCCGCGTGGTTATGGCCGCGGAATCCACCAATTCGTGAACGCAAAAGTATTCCCACCAGCTGGCTGAAGATCACCTTATATGAAGGACGTAATCGCCAGGTGCGCCGCATGACCGCCCATGTTGGCTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGTGATTACTCTTTGGATAATCTTGCCAATGGTGAATGGCGAGAAGTGACAGATTAA", + "dna_sequence_length": 654, + "functions": [ + "23S rRNA pseudouridine(2457) synthase" + ], + "id": "CDS_1113", + "location": [ + [ + "NC_000913", + 1194951, + "-", + 654 + ] + ], + "md5": "7a932f615f6cf8713455a68da35e646d", + "parent_gene": "", + "protein_md5": "02ae5257b7d6d50c0741e87f2fa8d4cc", + "protein_translation": "MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003823" + ], + [ + "gene_synonym", + "ECK1122" + ], + [ + "gene_synonym", + "EcoGene:EG10489" + ], + [ + "gene_synonym", + "GI:16129099" + ], + [ + "gene_synonym", + "GeneID:945702" + ], + [ + "gene_synonym", + "JW1122" + ], + [ + "gene_synonym", + "NP_415654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08200" + ], + [ + "gene_synonym", + "b1136" + ], + [ + "gene_synonym", + "icd" + ], + [ + "gene_synonym", + "icdA" + ], + [ + "gene_synonym", + "icdE" + ] + ], + "dna_sequence": "ATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGCAGTCGAGAAAGCCTATAAAGGCGAGCGTAAAATCTCCTGGATGGAAATTTACACCGGTGAAAAATCCACACAGGTTTATGGTCAGGACGTCTGGCTGCCTGCTGAAACTCTTGATCTGATTCGTGAATATCGCGTTGCCATTAAAGGTCCGCTGACCACTCCGGTTGGTGGCGGTATTCGCTCTCTGAACGTTGCCCTGCGCCAGGAACTGGATCTCTACATCTGCCTGCGTCCGGTACGTTACTATCAGGGCACTCCAAGCCCGGTTAAACACCCTGAACTGACCGATATGGTTATCTTCCGTGAAAACTCGGAAGACATTTATGCGGGTATCGAATGGAAAGCAGACTCTGCCGACGCCGAGAAAGTGATTAAATTCCTGCGTGAAGAGATGGGGGTGAAGAAAATTCGCTTCCCGGAACATTGTGGTATCGGTATTAAGCCGTGTTCGGAAGAAGGCACCAAACGTCTGGTTCGTGCAGCGATCGAATACGCAATTGCTAACGATCGTGACTCTGTGACTCTGGTGCACAAAGGCAACATCATGAAGTTCACCGAAGGAGCGTTTAAAGACTGGGGCTACCAGCTGGCGCGTGAAGAGTTTGGCGGTGAACTGATCGACGGTGGCCCGTGGCTGAAAGTTAAAAACCCGAACACTGGCAAAGAGATCGTCATTAAAGACGTGATTGCTGATGCATTCCTGCAACAGATCCTGCTGCGTCCGGCTGAATATGATGTTATCGCCTGTATGAACCTGAACGGTGACTACATTTCTGACGCCCTGGCAGCGCAGGTTGGCGGTATCGGTATCGCCCCTGGTGCAAACATCGGTGACGAATGCGCCCTGTTTGAAGCCACCCACGGTACTGCGCCGAAATATGCCGGTCAGGACAAAGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGCGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAA", + "dna_sequence_length": 1251, + "functions": [ + "isocitrate dehydrogenase", + "e14 prophage attachment site", + "tellurite reductase" + ], + "id": "CDS_1114", + "location": [ + [ + "NC_000913", + 1195123, + "+", + 1251 + ] + ], + "md5": "e4f4a7b0baa409983873486256c79b38", + "parent_gene": "", + "protein_md5": "e42af84f3d926cbb0b6da7334acd580a", + "protein_translation": "MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMDGAKLLKCSEFGDAIIENM", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003825" + ], + [ + "gene_synonym", + "ECK1123" + ], + [ + "gene_synonym", + "EcoGene:EG13448" + ], + [ + "gene_synonym", + "GI:16129100" + ], + [ + "gene_synonym", + "GeneID:945329" + ], + [ + "gene_synonym", + "JW1123" + ], + [ + "gene_synonym", + "NP_415655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75967" + ], + [ + "gene_synonym", + "b1137" + ], + [ + "gene_synonym", + "ymfD" + ] + ], + "dna_sequence": "ATGGTACTTGCTTTGAACTATAATATGCACGGAGTTAATATTCGCTCAGAGAATGCAGCAAAACCTCATACGATGCCCTCTAGATATCTTTGCGAGTATATTAGAAGCATTGAGAAAAATGGCCACGCCCTTGATTTTGGCTGCGGAAAACTTAGATATTCTGATGAATTAATCAGTAAATTTGATGAAGTTACTTTTCTAGACTCGAAAAGGCAACTTGAAAGAGAGCAAATTATTAGAGGAATTAAAACTAAAATTATTGACTATGTCCCACGATATTATAAAAATGCAAATACAGTTGCTTTCGAGGATGTCGACAAAATAATTGGGGGTTACGATTTCATCCTTTGCTCTAATGTTCTCTCTGCCGTTCCTTGTCGGGATACAATCGACAAAATAGTTCTTAGCATCAAGAGATTACTAAAATCAGGAGGTGAGACTCTTATTGTAAATCAATATAAAAGCTCATACTTCAAAAAATACGAAACAGGAAGAAAACATCTTTACGGATACATTTACAAAAATTCAAAAAGTGTTTCTTACTATGGATTACTCGATGAACTCGCAGTGCAAGAAATATGTTCTTCACATGGCCTTGAAATATTAAAGTCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAA", + "dna_sequence_length": 666, + "functions": [ + "e14 prophage", + "putative SAM-dependent methyltransferase" + ], + "id": "CDS_1115", + "location": [ + [ + "NC_000913", + 1197532, + "-", + 666 + ] + ], + "md5": "d5088428c0226f19384e92ae9ef776e5", + "parent_gene": "", + "protein_md5": "a6178063b351af7e302d9979efa9565b", + "protein_translation": "MVLALNYNMHGVNIRSENAAKPHTMPSRYLCEYIRSIEKNGHALDFGCGKLRYSDELISKFDEVTFLDSKRQLEREQIIRGIKTKIIDYVPRYYKNANTVAFEDVDKIIGGYDFILCSNVLSAVPCRDTIDKIVLSIKRLLKSGGETLIVNQYKSSYFKKYETGRKHLYGYIYKNSKSVSYYGLLDELAVQEICSSHGLEILKSWSKAGSSYVTVGSCNAI", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003827" + ], + [ + "gene_synonym", + "ECK1124" + ], + [ + "gene_synonym", + "EcoGene:EG13449" + ], + [ + "gene_synonym", + "GI:16129101" + ], + [ + "gene_synonym", + "GeneID:946722" + ], + [ + "gene_synonym", + "JW5166" + ], + [ + "gene_synonym", + "NP_415656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75968" + ], + [ + "gene_synonym", + "b1138" + ], + [ + "gene_synonym", + "ymfE" + ] + ], + "dna_sequence": "GTGAATAATATGTTCGAACCCCCCAAAAATTATAATGAAATGTTGCCTAAACTTCATAAAGCAACTTTCTTAAATACGCTAATATATTGCATACTTCTAGTTATTTACGAATACATCCCTTTAATAACATTACCAACCAAGTATGTCCCACCTATTAAAGATCATGAGAGCTTTATTAATTGGGCACTATCTTTTGGTATATTACCTTGTGCTTTTGCGATTTTTGCATATTTAATTAGCGGTGCGTTAGACCTACATAACAATGCAGCCAAACTACTTCGGGTGCGATATCTTTGGGATAAGCATCTAATTATAAAACCGTTATCACGGAGAGCTGGAGTCAACAGAAAATTAAATAAAGATGAAGCTCACAATGTAATGAGCAATCTATATTACCCTGAAGTAAGAAAAATTGAAGACAAACATTATATTGAACTCTTCTGGAATAAAGTATACTATTTTTGGATATTTTTTGAATTTTCGATAATTGCATTAATTTCCTTCCTAATAATCTTTTTTTGCAAACAAATGGATATTTTTCATGTTGAAGGTTCTTTGCTGTCTTTATTCTTTTTTGTAATTTTATCATTCTCAGTGAGTGGTATTATCTTTGCTTTGACAGTTAAGCCCAGAACTGAAAGTCAAGTCGGAAAAATCCCGGACGATAAAATAAAAGAATTTTTCACTAAAAATAACATTAATTGA", + "dna_sequence_length": 705, + "functions": [ + "e14 prophage", + "putative inner membrane protein" + ], + "id": "CDS_1116", + "location": [ + [ + "NC_000913", + 1198237, + "-", + 705 + ] + ], + "md5": "b62fb3283bb94f401bcb71b051a54d36", + "parent_gene": "", + "protein_md5": "23fceeaf7b9c2a65382824ad426f98df", + "protein_translation": "MNNMFEPPKNYNEMLPKLHKATFLNTLIYCILLVIYEYIPLITLPTKYVPPIKDHESFINWALSFGILPCAFAIFAYLISGALDLHNNAAKLLRVRYLWDKHLIIKPLSRRAGVNRKLNKDEAHNVMSNLYYPEVRKIEDKHYIELFWNKVYYFWIFFEFSIIALISFLIIFFCKQMDIFHVEGSLLSLFFFVILSFSVSGIIFALTVKPRTESQVGKIPDDKIKEFFTKNNIN", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003834" + ], + [ + "gene_synonym", + "ECK1125" + ], + [ + "gene_synonym", + "EcoGene:EG10535" + ], + [ + "gene_synonym", + "GI:16129102" + ], + [ + "gene_synonym", + "GeneID:948421" + ], + [ + "gene_synonym", + "JW1125" + ], + [ + "gene_synonym", + "NP_415657.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11072" + ], + [ + "gene_synonym", + "b1139" + ], + [ + "gene_synonym", + "lit" + ] + ], + "dna_sequence": "ATGCGCTCACCAATTTGTCATCTTTTCTCAGCAATTAATTCATCACCATTTAAGATTGCACCAGAGAAGGAGCAAGATCTTAAAACGATAGTTGACGACAAAAAAATTATAATTTCAGTTGTGAGTGAACCTGGTTTTAATATCCGAGTCAGGAAGAATGAGAGTAATAATTCACATGAAATAGTTCTAACAGTAGCTTCACTTGAATATATTTGGGCATTTTCCAATTTCTTTTGGGTTTTTACGCAAGAGTACTCCAAATCTCAGAAAAATAATGATGAGCACTTTGATTTAACAGGAAAAAATAGGCTTAAAAAGTCTGATGAACTTCTTAAATGGGCAAGGAAAAACTTGCAAACAACAGGTTGCGAATCATGGCCTAAAAAATGTCCCAAGCCAGAAGCATATTTACAAGGAAGCGAAGACTCACAAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTGTTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACAAAATGGATATTAGGCAACCTGTATGAATCCGCTCCTGAATTAAAGAAACGTGCACTTGGCATTGCTACGGCAGTGCTTTGTATACAAAGCTTAGAAGTTGAAAATTACTTCTGTTTACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGA", + "dna_sequence_length": 894, + "functions": [ + "T4 phage exclusion protein", + "cell death peptidase, e14 prophage" + ], + "id": "CDS_1117", + "location": [ + [ + "NC_000913", + 1198695, + "+", + 894 + ] + ], + "md5": "e700c34dae7966cb3d34dae8e6d10084", + "parent_gene": "", + "protein_md5": "e8dccd210af7a53172a40823ff764549", + "protein_translation": "MRSPICHLFSAINSSPFKIAPEKEQDLKTIVDDKKIIISVVSEPGFNIRVRKNESNNSHEIVLTVASLEYIWAFSNFFWVFTQEYSKSQKNNDEHFDLTGKNRLKKSDELLKWARKNLQTTGCESWPKKCPKPEAYLQGSEDSQVASEIFLCAIAWILHHEISHVVLQHPLVTTAFSTQEEREADSHATKWILGNLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVGNEELIEALCTVMLQYLFHGKNINVNLDGESFSSILGDLLCDISRLTSN", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003836" + ], + [ + "gene_synonym", + "ECK1126" + ], + [ + "gene_synonym", + "EcoGene:EG12370" + ], + [ + "gene_synonym", + "GI:16129103" + ], + [ + "gene_synonym", + "GeneID:948034" + ], + [ + "gene_synonym", + "JW1126" + ], + [ + "gene_synonym", + "NP_415658.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75969" + ], + [ + "gene_synonym", + "b1140" + ], + [ + "gene_synonym", + "int" + ], + [ + "gene_synonym", + "intE" + ], + [ + "gene_synonym", + "ycfI" + ] + ], + "dna_sequence": "ATGGCAGCCAGACCGCGTAAGAATAATGTTTCAGTCCCTAACTTATATCCGCTTTATAGTAGGAAGGTAAATAAAGTCTATTGGCGGTATAAGCATCCAGTGACAGGAAAATTCCATGCTTTGGGAACAAACGAAGCTGAAGCTATCGCTATTGCCACTGAGGCCAACACTCGCCTGGCTGAACAAAGAACCCGGCAGATTCTGGCTATCAGTGACAGGATCGCAACCAGCAAAGGAAAGGCTATCACAACGTCAACCTGGTTAGATCGCTATCAAGCGATCCAGGATGACAGGCTTAAAAGTGGTGATATAAGACTCAACACCTATAAACAAAAAGCTAAACCAGTATCCTTGCTCAGAGAACGAGCAGGAATGAAGTTGATCTCAGCCGTTGATGTCAGAGATATAGCACAATTGCTTGATGAGTATATCGCCGCTGGGCGGCCAAGAATGGCACAAGTAGTTCGCTCCGTCCTGATTGATGTTTTCAAAGAGGCGCAGCACTACGGAGAAGTACCTCCTGGCTATAACCCAGCATTAGCCACTAAACAACCAAGAAGAAAAATTACCCGACAACGGCTGAGCCTTGAAGAATGGAAAAAAATCTTCGATATCGCAGACGCTACTCATCGTTACATGGGAAATGCCATGCTGTTAGCGCTGGTTACTGGTCAGCGGTTAGGTGATATTTCGCGTATGAAATTTAGCGATATTTGGGATGATCATCTTCATGTCATTCAGGAAAAGACCGGGAGCAAAATCGCAATTCCTCTTTCTCTTCGCCTCAATGCGATTAACTGGAGTTTACGCGATGTAGTAGCCCGCTGCCGTGACTATGCAGTCAGTGCATACTTAGTGCATTTTTTTCGTTCAACTTCACAAGCAGAGCGCGGAGCGCAGGTTAAAGCCAATACATTGACGATGAATTTTAGTAAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTATCATGATGATCGAGGTAAAGGATGGAGCAAAGTAGCGTTGTGA", + "dna_sequence_length": 1128, + "functions": [ + "e14 prophage", + "putative integrase" + ], + "id": "CDS_1118", + "location": [ + [ + "NC_000913", + 1200806, + "-", + 1128 + ] + ], + "md5": "5d3f5a84e7bd11b7bc54db604837b7c4", + "parent_gene": "", + "protein_md5": "47bd462b974928bb80de7a1118181929", + "protein_translation": "MAARPRKNNVSVPNLYPLYSRKVNKVYWRYKHPVTGKFHALGTNEAEAIAIATEANTRLAEQRTRQILAISDRIATSKGKAITTSTWLDRYQAIQDDRLKSGDIRLNTYKQKAKPVSLLRERAGMKLISAVDVRDIAQLLDEYIAAGRPRMAQVVRSVLIDVFKEAQHYGEVPPGYNPALATKQPRRKITRQRLSLEEWKKIFDIADATHRYMGNAMLLALVTGQRLGDISRMKFSDIWDDHLHVIQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSAYLVHFFRSTSQAERGAQVKANTLTMNFSKARDLARIDWGEGSPATFHEQRSLSERLYKEQGLDTQKLLGHKTQQQTDRYHDDRGKGWSKVAL", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003838" + ], + [ + "gene_synonym", + "ECK1127" + ], + [ + "gene_synonym", + "EcoGene:EG14245" + ], + [ + "gene_synonym", + "GI:16129104" + ], + [ + "gene_synonym", + "GeneID:945705" + ], + [ + "gene_synonym", + "JW1127" + ], + [ + "gene_synonym", + "NP_415659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75970" + ], + [ + "gene_synonym", + "Vxis" + ], + [ + "gene_synonym", + "b1141" + ], + [ + "gene_synonym", + "xisE" + ], + [ + "gene_synonym", + "ymfG" + ] + ], + "dna_sequence": "ATGCTTCAAATGTTAACTCTTGAAGAATGGGCTGCTGAAAAATACAGAAGTAATCCTCCAAGTGTGTCCACATTGCGTCGTTATGCTAAGCAGAATTTATTTTGTCCACCGGCCATGAAACAAGGCCGGTTATGGCGAGTGCGTGAGGACGCCGAGTTAGTTGGGGAGTTGGTAACACCTGTAATCAAGAAAAATGACTCATTACTTTTGCAACGGATTTTGAGTAATGGCAGCCAGACCGCGTAA", + "dna_sequence_length": 246, + "functions": [ + "e14 prophage", + "putative excisionase" + ], + "id": "CDS_1119", + "location": [ + [ + "NC_000913", + 1201032, + "-", + 246 + ] + ], + "md5": "6f50d6007b7845da36aa9ffd2bc9292d", + "parent_gene": "", + "protein_md5": "450ad63af74e37ebb3b99b00debf7175", + "protein_translation": "MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003846" + ], + [ + "gene_synonym", + "ECK1129" + ], + [ + "gene_synonym", + "EcoGene:EG14247" + ], + [ + "gene_synonym", + "GI:90111220" + ], + [ + "gene_synonym", + "GeneID:945712" + ], + [ + "gene_synonym", + "JW5168" + ], + [ + "gene_synonym", + "NP_415661.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75972" + ], + [ + "gene_synonym", + "b1143" + ], + [ + "gene_synonym", + "ymfI" + ] + ], + "dna_sequence": "ATGAACCAGTTTTATGTTCACGTTCGTCTATTTGAAGACACAGCCGAACAGACCAAAAAATTTGAAGAATTAATGCTTAACTTTCTGTACCAGAAAACAGTTAAAGAGTCTGACGATAGCTGCTGCAGACTGATTCCAGAGGGATATATCCTCAAAAGTACAATGAACTGCCAACAAATCCTTGATCAAACATTTTCAATTGCTAACAGTGCCGGTGTTGACGCAAATATATTTGTCTGTAAATTTGAACAAAGCGCATGCTTACTTCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAA", + "dna_sequence_length": 342, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1120", + "location": [ + [ + "NC_000913", + 1201497, + "+", + 342 + ] + ], + "md5": "c95e1b78e728e22fb8d89333e4ef1864", + "parent_gene": "", + "protein_md5": "9a8e20c70adadde8d51001fa55254a2e", + "protein_translation": "MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003848" + ], + [ + "gene_synonym", + "ECK1130" + ], + [ + "gene_synonym", + "EcoGene:EG14248" + ], + [ + "gene_synonym", + "GI:90111221" + ], + [ + "gene_synonym", + "GeneID:945718" + ], + [ + "gene_synonym", + "NP_415662.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75973" + ], + [ + "gene_synonym", + "b1144" + ], + [ + "gene_synonym", + "ymfJ" + ] + ], + "dna_sequence": "ATGAATGAGCAGAATTTGAAGCATGTGATCGCATTGTTGCTGGAAGACGCTAAACGTTTGCAGCAGATAGAGCCAAATGCAGGCACTGAGGCCCGCATTTTGTTAGCAAAACAGGCATTAAAGACTTGCGGGGCGCAAGCCCCTGGTCGAACCGAGTTCATGAATTTCATGGCTAACACACTCACCCCTCTGCCATGCAATGGAGAGAAGGTGAGCCGTGTTTATCACGACACAATGGTTAAGGCTTTAAGAATCGAGCTTGATGGGCTTAGGCGTAAGATCGTAATGAACGAAATCGTTACCAACTAA", + "dna_sequence_length": 309, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1121", + "location": [ + [ + "NC_000913", + 1202084, + "-", + 309 + ] + ], + "md5": "9c65d493bd8816200f57ea3f80549df5", + "parent_gene": "", + "protein_md5": "72f8df15661048b8413c8a743c15d63b", + "protein_translation": "MNEQNLKHVIALLLEDAKRLQQIEPNAGTEARILLAKQALKTCGAQAPGRTEFMNFMANTLTPLPCNGEKVSRVYHDTMVKALRIELDGLRRKIVMNEIVTN", + "protein_translation_length": 102, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003851" + ], + [ + "gene_synonym", + "ECK1131" + ], + [ + "gene_synonym", + "EcoGene:EG14249" + ], + [ + "gene_synonym", + "GI:16129108" + ], + [ + "gene_synonym", + "GeneID:945719" + ], + [ + "gene_synonym", + "JW1131" + ], + [ + "gene_synonym", + "NP_415663.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75974" + ], + [ + "gene_synonym", + "b1145" + ], + [ + "gene_synonym", + "cohE" + ], + [ + "gene_synonym", + "ymfK" + ] + ], + "dna_sequence": "ATGAAAACAATCCATGACATCCGGCGGTCTAACGCCAGAAAACTGAGAGATGGTGTTGGCGGGAATTCTTCCTTTGCCACTATGATTGATCGCGAGCCAACCCAGACCAGCAGGTTTATGGGAGATGGTGCTACTAAAAATATCGGTGACAGCATGGCACGACACATCGAAAAATGTTTCGACCTGCCTGTAGGATGGCTCGATCAAGAACACCAGACAACGAACATCACAAAAAAACCTGATGTTTCAATCACTAATAAACAAATCACATTAGTCCCTGTCATATCATGGGTACAGGCCGGAGCATGGAAAGAAGTTGGATATTCTGAGGTTGATTTGAGCACAGCAGAAACGTATCCCTGCCCTGTACCCTGTGGGGAAATGACTTATATCTTGCGGGTAATAGGTGATTCAATGATTGATGAGTACCGCCCGGGAGACATGATTTTTGTCGATCCTGAAGTACCTGCCTGCCACGGTGACGACGTTATTGCATTGATGCACGATACAGGTGAAACCACCTTCAAAAGGTTGATAGAAGATGGGACACAGCGTTATCTCAAAGCGTTAAACCCAAACTGGCCTGAGCCTTACATTAAGATCAACGGTAATTGCTCTATAATTGGTACTGTGATTTTCTCAGGAAAACCAAGAAGATACAAAATCAAAGCCTAA", + "dna_sequence_length": 675, + "functions": [ + "e14 prophage", + "repressor protein phage e14" + ], + "id": "CDS_1122", + "location": [ + [ + "NC_000913", + 1202933, + "-", + 675 + ] + ], + "md5": "6de076ffc8635c05942b8f049a438201", + "parent_gene": "", + "protein_md5": "9112855acbc268ced5ce5555b7d45a54", + "protein_translation": "MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGATKNIGDSMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIKINGNCSIIGTVIFSGKPRRYKIKA", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003856" + ], + [ + "gene_synonym", + "ECK4469" + ], + [ + "gene_synonym", + "EcoGene:EG14414" + ], + [ + "gene_synonym", + "GI:90111222" + ], + [ + "gene_synonym", + "GeneID:945720" + ], + [ + "gene_synonym", + "JW5169" + ], + [ + "gene_synonym", + "NP_415664.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75975" + ], + [ + "gene_synonym", + "b1146" + ], + [ + "gene_synonym", + "croE" + ], + [ + "gene_synonym", + "ymfT" + ] + ], + "dna_sequence": "ATGAAAGCGTATTGGGACTCTTTAACCAAAGAACAGCAGGGCGAGTTGGCCGGAAAAGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAG", + "dna_sequence_length": 201, + "functions": [ + "e14 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1123", + "location": [ + [ + "NC_000913", + 1203024, + "+", + 201 + ] + ], + "md5": "3a658331630b04f9e8844cd5efc06e95", + "parent_gene": "", + "protein_md5": "a9e0b168bbc9bd2471330d3db508949b", + "protein_translation": "MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003860" + ], + [ + "gene_synonym", + "ECK1133" + ], + [ + "gene_synonym", + "EcoGene:EG14250" + ], + [ + "gene_synonym", + "GI:145698241" + ], + [ + "gene_synonym", + "GeneID:945717" + ], + [ + "gene_synonym", + "JW1133" + ], + [ + "gene_synonym", + "NP_415665.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75976" + ], + [ + "gene_synonym", + "b1147" + ], + [ + "gene_synonym", + "ymfL" + ] + ], + "dna_sequence": "GTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTGACTGGCTCGATGTAACAGAAAACGCTTTATTCAACCGCCTTCGTGCAGATGGCGATCAGATTTTCCCGCTGGGATGGGCAATGGTTTTACAGCGTGCTGGTGGCACTCACTTCATTGCTGATGCTGTGGCGCAGTCTGCAAATGGCGTCTTTGTGTCTCTTCCTGACGTCGAGGATGTGGACAACGCCGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGA", + "dna_sequence_length": 558, + "functions": [ + "e14 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1124", + "location": [ + [ + "NC_000913", + 1203268, + "+", + 558 + ] + ], + "md5": "f42ae96daa8b7ff14ab9a8e8d0482afb", + "parent_gene": "", + "protein_md5": "197cd0ccaf605704832ba9b879a760ec", + "protein_translation": "MGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003862" + ], + [ + "gene_synonym", + "ECK1134" + ], + [ + "gene_synonym", + "EcoGene:EG14251" + ], + [ + "gene_synonym", + "GI:16129111" + ], + [ + "gene_synonym", + "GeneID:945715" + ], + [ + "gene_synonym", + "JW1134" + ], + [ + "gene_synonym", + "NP_415666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75977" + ], + [ + "gene_synonym", + "b1148" + ], + [ + "gene_synonym", + "ymfM" + ] + ], + "dna_sequence": "ATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGACAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTATGAGCATGAATGCTTCAGCCCGCTCGAACAGTTTCGTCGTAAATTCAGGGAAATAG", + "dna_sequence_length": 339, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1125", + "location": [ + [ + "NC_000913", + 1203822, + "+", + 339 + ] + ], + "md5": "f083534c1947f6965067fee1dd7bcac9", + "parent_gene": "", + "protein_md5": "e6139b0809a25a82d23ae3d5594dfbfa", + "protein_translation": "MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVLCDKLTAGSKITTECPSESFVGSRKHNGLSTSAKVMSMNASARSNSFVVNSGK", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4507" + ], + [ + "gene_synonym", + "EcoGene:EG14495" + ], + [ + "gene_synonym", + "GeneID:7751644" + ], + [ + "gene_synonym", + "b4692" + ], + [ + "gene_synonym", + "oweE" + ] + ], + "dna_sequence": "ATGAGCACTAAATTAACCGGCTATGTATGGGATGGTTGCGCTGCATCAGGCATGAAGTTATCCAGCGTGGCAATTATGGCCCGCCTGGCTGATTTCAGTAATGACGAAGGTGTGTGCTGGCCATCAATTGAAACCATTGCCCGTCAGATTGGCGCGGGGATGAGTACCGTCAGAACGGCTATCGCACGGCTGGAAGCAGAAGGCTGGTTAACGCGTAAGGCGCGTCGCCAGGGT", + "dna_sequence_length": 234, + "id": "CDS_1126", + "location": [ + [ + "NC_000913", + 1204170, + "+", + 234 + ] + ], + "md5": "839a750bc4f3e4ad07b19edafca8fe03", + "parent_gene": "", + "protein_md5": "c019a308e7bd5f4246aee9b91ca66f9f", + "protein_translation": "MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQG", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003865" + ], + [ + "gene_synonym", + "ECK1135" + ], + [ + "gene_synonym", + "EcoGene:EG14252" + ], + [ + "gene_synonym", + "GeneID:7751645" + ], + [ + "gene_synonym", + "JW1135" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75978" + ], + [ + "gene_synonym", + "aaaE" + ], + [ + "gene_synonym", + "b4693" + ], + [ + "gene_synonym", + "ymfN" + ] + ], + "dna_sequence": "GATGGTTCATCACCCCACTGTGCCGTGGTGGATGAATATCACGAGCACGCCACAGATGCGCTTTACACCACGATGCTTACCGGGATGGGGGCGCGACGCCAGCCACTGATGTGGGCCATTACCACCGCCGGGTACAACATTGAGGGGCCGTGCTACGACAAACGGCGGGAAGTCATCGAGATGCTCAACGGCTCGGTGCCAAACGATGAACTGTTCGGGATCATCTATACCGTTGATGAAGGTGACGACTGGACCGACCCGCAGGTGCTGGAAAAAGCCAATCCAAATATTGGCGTGTCGGTTTATCGCGAATTTTTGTTAAGTCAGCAGCAGCGTGCGAAAAATAACGCCCGTCTGGCAAACGTCTTTAAAACAAAACACCTCAATATCTGGGCGTCGGCGCGTTCGGCGTATTTCAACCTGGTGAGCTGGCAGAGCTGCGAGGATAAATCACTGACCCTTGAGCAGTTCGAGGGGCAGCCGTGCATTCTGGCCTTTGACCTGGCGCGTAAGCTGGATATGAACAGCATGGCGCGACTTTATACCCGCGAGATTGACGGTAAAACGCATTACTACAGTGTGGCCCCGCGTTTCTGGGTACCGTATGACACGGTGTACAGCGTCGAGAAAAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAATGGGTGGAAATGGGCGTTCTGACCGTTACCGATGGTGCGGAGGTGGATTATCGCTACATCCTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCGGTCAGTGAGTCACCCATCGACCCCTTCGGGGCGACCGGGCTGTCACATGACCTTGCTGATGAAGACCTGAACCCCGTCACCATCATTCAGAACTACACCAACATGTCCGATCCGATGAAAGAGCTGGAAGCGGCGATTGAATCGGGGCGCTTTCATCATGACGGCAATCCCATCATGACCTGGTGTATCGGCAACGTGGTCGGCAAAACCATTCCGGGTAACGATGATGTGGTGAAGCCCGTCAAGGAGCAGGCGGAAAACAAAATCGATGGTGCAGTTGCGCTGATTATGGCGGTTGGCAGAGCCATGCTGTACGAGAAAGAAGACACGCTGTCTGATCACATTGAGTCCTACGGGATCCGCTCGCTTTAA", + "dna_sequence_length": 1134, + "id": "CDS_1127", + "location": [ + [ + "NC_000913", + 1204404, + "+", + 1134 + ] + ], + "md5": "f9530fd0ac13a03d0980185e0f573814", + "parent_gene": "", + "protein_md5": "e7d6211a028c9d8dc69d5a2bca7ce431", + "protein_translation": "DGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLANVFKTKHLNIWASARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTDGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003868" + ], + [ + "gene_synonym", + "ECK1136" + ], + [ + "gene_synonym", + "EcoGene:EG14336" + ], + [ + "gene_synonym", + "GI:16129113" + ], + [ + "gene_synonym", + "GeneID:945700" + ], + [ + "gene_synonym", + "JW1136" + ], + [ + "gene_synonym", + "NP_415668.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75979" + ], + [ + "gene_synonym", + "b1150" + ], + [ + "gene_synonym", + "ymfR" + ] + ], + "dna_sequence": "ATGATCATGCTGATTCTCGCGCCTCTGGTGGGCGTGCTGGGTGCGCTTTTGCTGGCGTATGGTGCCTGGCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAG", + "dna_sequence_length": 183, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1128", + "location": [ + [ + "NC_000913", + 1205549, + "+", + 183 + ] + ], + "md5": "5cfdcb2b8dd5d02e705df84482340a91", + "parent_gene": "", + "protein_md5": "3252a72f6433c82ffb3652bd3fc09dc1", + "protein_translation": "MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003870" + ], + [ + "gene_synonym", + "ECK1137" + ], + [ + "gene_synonym", + "EcoGene:EG14253" + ], + [ + "gene_synonym", + "GeneID:945698" + ], + [ + "gene_synonym", + "JW1137" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75980" + ], + [ + "gene_synonym", + "b1151" + ], + [ + "gene_synonym", + "beeE" + ], + [ + "gene_synonym", + "ymfO" + ] + ], + "dna_sequence": "GTGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGATCAGCAGTCAGCGGGCTATGCGACTGACGGCGGTTTTTTCCTGCGTCAGAGTGCTGGCAGAGTCGGTCGGGATGTTGCCCTGCAATCTGTATCACCTGAACGGCAGCCTGAAGCAGAGAGCCACCGGCGAACGTCTGCATAAACTGATCTCCACGCATCCCAATGGCTATATGACGCCGCAGGAGTTCTGGGAGCTGGTGGTCACCTGTCTGTGCCTGAGGGGAAACTTTTACGCCTACAAAGTGAAAGCATTTGGCGAAGTGGCTGAACTGCTGCCCGTCGATCCCGGCTGTGTGGTATATG", + "dna_sequence_length": 412, + "id": "CDS_1129", + "location": [ + [ + "NC_000913", + 1205731, + "+", + 412 + ] + ], + "md5": "5a75c9b3fe59199fc344865fd1ce7ba9", + "parent_gene": "", + "protein_md5": "d11420117a6799cf164fcf7f21f94750", + "protein_translation": "VFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVY", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003872" + ], + [ + "gene_synonym", + "ECK1138" + ], + [ + "gene_synonym", + "EcoGene:EG14254" + ], + [ + "gene_synonym", + "GeneID:945703" + ], + [ + "gene_synonym", + "JW5170" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75981" + ], + [ + "gene_synonym", + "b1152" + ], + [ + "gene_synonym", + "jayE" + ], + [ + "gene_synonym", + "ymfP" + ] + ], + "dna_sequence": "CGCTGGGAAGGTGTCAGCGATGGCCTGAAGGTGACCGCCGGGAGTGTTATTCAGCGCGATGACCTGGTGCAGTACACGACAACTGACGATGCAACCAGCTCCGGTGGTGTCCTGCGCGTGCCGATCGCCTGCTCAAGTGCAGGTGCGGTCGGTAACGCTGACGACGGTACGGCATTAATCCTGGTCACGCCGGTGAATGGTCTGCCGTCTTCCGGTGTGGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCACTGGCCCCGGTGGCAGGCTCTGATTTGTATGTGTTCAGGCCGGTGGCACATACGGTGGATTTTCATATCCGCGTGACGCCGGACACACCAGAAATACGGGCTGCCATTACCGCGGAGTTGCGTTCGTTCCTGCTGCGTGATGGTTATCCGCAGGGAGAACTCAAGGTATCGCGTATCAGTGAGGCGATTTCCGGTGCGAACGGGGAATACAGCCATCAGTTGCTTGCACCGGTGGACAATATCTCCATTGCGAAAAACGAACTGGCGGTACTGGGGACGATTTCATGGACGTGA", + "dna_sequence_length": 780, + "id": "CDS_1130", + "location": [ + [ + "NC_000913", + 1206143, + "+", + 780 + ] + ], + "md5": "54a83a8a8cda89dbc22ac6507637ca72", + "parent_gene": "", + "protein_md5": "cc78ad8441b9933c5ce93a6c831196d4", + "protein_translation": "RWEGVSDGLKVTAGSVIQRDDLVQYTTTDDATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHLMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPVDNISIAKNELAVLGTISWT", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003874" + ], + [ + "gene_synonym", + "ECK1139" + ], + [ + "gene_synonym", + "EcoGene:EG14255" + ], + [ + "gene_synonym", + "GI:16129116" + ], + [ + "gene_synonym", + "GeneID:945707" + ], + [ + "gene_synonym", + "JW1139" + ], + [ + "gene_synonym", + "NP_415671.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75982" + ], + [ + "gene_synonym", + "b1153" + ], + [ + "gene_synonym", + "ymfQ" + ] + ], + "dna_sequence": "ATGGACGTGACAAACGATGATTACATCCGCCTGTTATCGGCACTGTTGCCGCCCGGTCCGGTGTGGTCAGCCAGCGATCCGGCGATTGCCGGTGCGGCACCGTCATTAACCCGTGTTCATCAGCGTGCGGATGCCCTGATGCGGGAGCTGGATCCGCGCACCACCACTGAACTGATAAACCGCTGGGAGCGTCTGTGCGGTCTGCCGGATGAATGTATTCCGGCGGGAACGCAGACCCTTCGCCAGCGTCAGCAACGGCTGGATGCGAAGGTTAACCTGGCGGGCGGCATCAACGAGGATTTTTATCTTGCACAGCTTGCTGCCCTGGGCAGACCAGATGCCACCATCACGCGATACGACAAAAGCACTTTCACCTGCTCATCGGCCTGTACTGACGCGGTGAATGCGCCGGAATGGCGGTATTACTGGCAGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAA", + "dna_sequence_length": 585, + "functions": [ + "prohage e14 tail protein homolog" + ], + "id": "CDS_1131", + "location": [ + [ + "NC_000913", + 1206913, + "+", + 585 + ] + ], + "md5": "9db846b6711bba168438057386cdd561", + "parent_gene": "", + "protein_md5": "0413a8cc726bee7b246b5530b1030698", + "protein_translation": "MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003876" + ], + [ + "gene_synonym", + "ECK1140" + ], + [ + "gene_synonym", + "EcoGene:EG12877" + ], + [ + "gene_synonym", + "GI:16129117" + ], + [ + "gene_synonym", + "GeneID:945726" + ], + [ + "gene_synonym", + "JW1140" + ], + [ + "gene_synonym", + "NP_415672.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45581" + ], + [ + "gene_synonym", + "b1154" + ], + [ + "gene_synonym", + "stfP" + ], + [ + "gene_synonym", + "ycfK" + ] + ], + "dna_sequence": "ATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTATTACTATAACTGGATTGCTATTGGGTATTAA", + "dna_sequence_length": 630, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1132", + "location": [ + [ + "NC_000913", + 1207501, + "+", + 630 + ] + ], + "md5": "a7540343a6704a43c4d14ec0fcff8066", + "parent_gene": "", + "protein_md5": "6cc98ea6c834f284f178d915e1343173", + "protein_translation": "MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEGAKLNAATATLGRTGFIAIPVMIGGIEQSVIIQWGWNAAKASASGGDGNTVVFPVAFNNACVAVVANYDNVSAPINAVATGGYTTTSFLLRCAAQTGSYYYNWIAIGY", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003878" + ], + [ + "gene_synonym", + "ECK1141" + ], + [ + "gene_synonym", + "EcoGene:EG14337" + ], + [ + "gene_synonym", + "GI:16129118" + ], + [ + "gene_synonym", + "GeneID:945724" + ], + [ + "gene_synonym", + "JW5171" + ], + [ + "gene_synonym", + "NP_415673.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09154" + ], + [ + "gene_synonym", + "b1155" + ], + [ + "gene_synonym", + "tfaP" + ], + [ + "gene_synonym", + "ymfS" + ] + ], + "dna_sequence": "ATGAAAATATACTGTTGCTTAAATACCGTTGGTTTTTTTATGGATGGCTGTGGCGTCATTCCGCCAGATTCTAAAGAAATAACGGCAGAACACTGGCAGTCATTATTAAAATCTCAAGCTGAAGGAGGCGTGATCGATTTTTCTGTTTTTCCTCCTTCTATTAAAGAGGTTATCCGTACTCATGATGATGAAGTCGCAGATGCGAACTTTCAAAAGCAGATGCTTATCTCTGATGCAACTGATTTTATCAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGA", + "dna_sequence_length": 414, + "functions": [ + "e14 prophage", + "uncharacterized protein" + ], + "id": "CDS_1133", + "location": [ + [ + "NC_000913", + 1208132, + "+", + 414 + ] + ], + "md5": "37bbfcaf748528d347ee1fa7d45834d1", + "parent_gene": "", + "protein_md5": "96e39427a035ca1baf844d56b0af3439", + "protein_translation": "MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003880" + ], + [ + "gene_synonym", + "ECK1142" + ], + [ + "gene_synonym", + "EcoGene:EG11120" + ], + [ + "gene_synonym", + "GI:16129119" + ], + [ + "gene_synonym", + "GeneID:945723" + ], + [ + "gene_synonym", + "JW1142" + ], + [ + "gene_synonym", + "NP_415674.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09153" + ], + [ + "gene_synonym", + "b1156" + ], + [ + "gene_synonym", + "tfaE" + ], + [ + "gene_synonym", + "ycfA" + ] + ], + "dna_sequence": "ATGCATAAAGCAATATTAAATAGTGACCTTATTGCAACAAAGGCAGGGGATGTTACCGTTTATAACTACGATGGTGAAACACGGGAATATATTTCCACTTCAAATGAATATCTTGCCGTTGGTGTCGGCATTCCGGCATGTTCCTGTTTAGATGCCCCTGGTACACATAAGGCTGGTTATGCAATCTGCCGTTCTGCAGATTTTAACTCATGGGAATATGTGCCAGACCATCGCGGTGAAACGGTCTATAGCACCAAAACTGGAGAATCAAAAGAAATCAAAGCTCCGGGTGATTACCCTGAAAATACAACCACTATCGCCCCTTTATCTCCATACGATAAATGGGATGGTGAGAAATGGGTGACCGATACTGAAGCACAGCATAGCGCCGCAGTAGACGCGGCAGAAGCACAGCGCCAGTCACTGATTGATGCTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTGCAGGCCGGACGTAAACTGACGCAGGCAGAAACAACCAGACTTAACGCTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCGGAGGCGTAG", + "dna_sequence_length": 603, + "functions": [ + "e14 prophage", + "putative tail fiber assembly protein" + ], + "id": "CDS_1134", + "location": [ + [ + "NC_000913", + 1209119, + "-", + 603 + ] + ], + "md5": "d318ec906008b70f817d950a8da996be", + "parent_gene": "", + "protein_md5": "5e5d906cf255ee9cac5a6946c985b2d3", + "protein_translation": "MHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGIPACSCLDAPGTHKAGYAICRSADFNSWEYVPDHRGETVYSTKTGESKEIKAPGDYPENTTTIAPLSPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003882" + ], + [ + "gene_synonym", + "ECK1143" + ], + [ + "gene_synonym", + "EcoGene:EG11818" + ], + [ + "gene_synonym", + "GeneID:945722" + ], + [ + "gene_synonym", + "JW5172" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33227" + ], + [ + "gene_synonym", + "b1157" + ], + [ + "gene_synonym", + "stfE" + ], + [ + "gene_synonym", + "ycfE" + ] + ], + "dna_sequence": "GTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCGCCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGTATGCAACGGAGGATCATGCTCATGGATTACCGTCAAGATCCACGATTGTGACTGATGCAACGATTAATTTCTATTTTGATGAAATATGGGTAAATAGTGGCACTGACATTATCAAAAGAGGAAACACAAACGATGCCGGATTACCAGCCCCGGATTATGGAACCTTTAAAACATATAAACAATCAGTGGATGGTTTAGGTGCCGCAGCCTCAGAAACGCGTCCGCGTAATATTGCATTTAACTATATCGTGAGGGCAGCCTGA", + "dna_sequence_length": 501, + "id": "CDS_1135", + "location": [ + [ + "NC_000913", + 1209619, + "-", + 501 + ] + ], + "md5": "51d25062353b8c658e0f6fc1cd85277e", + "parent_gene": "", + "protein_md5": "85c06ba0f5374d69ecd7ac794d44fcba", + "protein_translation": "VGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGIDTGRSILSIQGYATEDHAHGLPSRSTIVTDATINFYFDEIWVNSGTDIIKRGNTNDAGLPAPDYGTFKTYKQSVDGLGAAASETRPRNIAFNYIVRAA", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003888" + ], + [ + "gene_synonym", + "ECK1144" + ], + [ + "gene_synonym", + "EcoGene:EG10737" + ], + [ + "gene_synonym", + "GI:16129121" + ], + [ + "gene_synonym", + "GeneID:945721" + ], + [ + "gene_synonym", + "JW1144" + ], + [ + "gene_synonym", + "NP_415676.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03014" + ], + [ + "gene_synonym", + "b1158" + ], + [ + "gene_synonym", + "pin" + ], + [ + "gene_synonym", + "pinE" + ] + ], + "dna_sequence": "ATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTTGTCGTGCTGGTGGAGGAGTTGCGCGAACGAGGCATCAACTTTCGTAGTCTGACGGATTCAATTGATACCAGCACACCAATGGGACGCTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAAATGGAGCGTGAACTGATTGTTGAACGAACAAAAGCTGGACTGGAAACTGCTCGTGCACAGGGACGAATTGGTGGACGTCGTCCCAAACTTACACCAGAACAATGGGCACAAGCTGGACGATTAATTGCAGCAGGAACTCCTCGCCAGAAGGTGGCGATTATCTATGATGTTGGTGTGTCAACTTTGTATAAGAGGTTTCCTGCAGGGGATAAATAA", + "dna_sequence_length": 555, + "functions": [ + "e14 prophage", + "site-specific DNA recombinase" + ], + "id": "CDS_1136", + "location": [ + [ + "NC_000913", + 1209685, + "+", + 555 + ] + ], + "md5": "ac1206954c399ee46ad7be25e3ad850c", + "parent_gene": "", + "protein_md5": "ac14535ab57d70334ef322472f6f8bd6", + "protein_translation": "MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRFPAGDK", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003891" + ], + [ + "gene_synonym", + "ECK1145" + ], + [ + "gene_synonym", + "EcoGene:EG10573" + ], + [ + "gene_synonym", + "GI:16129122" + ], + [ + "gene_synonym", + "GeneID:945727" + ], + [ + "gene_synonym", + "JW1145" + ], + [ + "gene_synonym", + "NP_415677.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24200" + ], + [ + "gene_synonym", + "b1159" + ], + [ + "gene_synonym", + "mcrA" + ], + [ + "gene_synonym", + "rglA" + ] + ], + "dna_sequence": "ATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCAAGTCGTAGTATATCTGGCGTCATCATCAGTCAGAAAACATATGCATTCTTTGGATGAAAGAAAAATCCATCCTGGTGAATATTTTACTTTGATTGGTAATAGCCCCCGCGATATACGCTTGAAGATGTGTGGTTATCAGGCTTATTTTAGTCGTACGGGGAGAAAGGAAATTCCTTCCGGCAATAGAACGAAACGAATATTGATAAATGTTCCAGGTATTTATAGTGACAGTTTTTGGGCGTCTATAATACGTGGAGAACTATCAGAGCTTTCACAGCCTACAGATGATGAATCGCTTCTGAATATGAGGGTTAGTAAATTAATTAAGAAAACGTTGAGTCAACCCGAGGGCTCCAGGAAACCAGTTGAGGTAGAAAGACTACAAAAAGTTTATGTCCGAGACCCGATGGTAAAAGCTTGGATTTTACAGCAAAGTAAAGGTATATGTGAAAACTGTGGTAAAAATGCTCCGTTTTATTTAAATGATGGAAACCCATATTTGGAAGTACATCATGTAATTCCCCTGTCTTCAGGTGGTGCTGATACAACAGATAACTGTGTTGCCCTTTGTCCGAATTGCCATAGAGAATTGCACTATAGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAA", + "dna_sequence_length": 834, + "functions": [ + "putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease", + "5-methylcytosine DNA binding protein" + ], + "id": "CDS_1137", + "location": [ + [ + "NC_000913", + 1210346, + "+", + 834 + ] + ], + "md5": "98627fe30a9b0ebe29d1db295097a438", + "parent_gene": "", + "protein_md5": "c5ecccb07fa1d41bf21a63f418aa50e5", + "protein_translation": "MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285040" + ], + [ + "gene_synonym", + "ECK1146" + ], + [ + "gene_synonym", + "EcoGene:EG10009" + ], + [ + "gene_synonym", + "GeneID:4056026" + ], + [ + "gene_synonym", + "JW5173" + ], + [ + "gene_synonym", + "b4519" + ], + [ + "gene_synonym", + "icd" + ], + [ + "gene_synonym", + "icdC" + ] + ], + "dna_sequence": "ATGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATGGAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAA", + "dna_sequence_length": 165, + "id": "CDS_1138", + "location": [ + [ + "NC_000913", + 1211413, + "+", + 165 + ] + ], + "md5": "142e277219d7b0f63372455bdee5a112", + "parent_gene": "", + "protein_md5": "08d54590a336783f54898f371cf28414", + "protein_translation": "MLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGEAIIENM", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003893" + ], + [ + "gene_synonym", + "ECK1147" + ], + [ + "gene_synonym", + "EcoGene:EG13885" + ], + [ + "gene_synonym", + "GI:16129123" + ], + [ + "gene_synonym", + "GeneID:945729" + ], + [ + "gene_synonym", + "JW1147" + ], + [ + "gene_synonym", + "NP_415678.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75987" + ], + [ + "gene_synonym", + "b1160" + ], + [ + "gene_synonym", + "elb1" + ], + [ + "gene_synonym", + "elbA" + ], + [ + "gene_synonym", + "iraM" + ], + [ + "gene_synonym", + "ycgW" + ] + ], + "dna_sequence": "ATGAAGTGGATAGTAATTGACACGGTAATTCAACCTACATGTGGTATATCTTTTTCAGCCATATGGGGTAATATGAAAATGATCATCTGGTATCAATCTACTATATTTCTCCCTCCTGGCAGTATATTTACACCGGTTAAGTCTGGTATTATCCTTAAGGATAAAGAATATCCTATTACTATTTATCACATCGCACCATTCAACAAGGATTTATGGAGTTTACTCAAAAGCAGTCAAGAGTGTCCTCCAGGAGAAAGCAAAATAACAAATAAATGTTTACATAATAGTTGCATTATAAAAATATGCCCATATGGGCTCAAGTAA", + "dna_sequence_length": 324, + "functions": [ + "RpoS stabilzer during Mg starvation, anti-RssB factor" + ], + "id": "CDS_1139", + "location": [ + [ + "NC_000913", + 1212003, + "-", + 324 + ] + ], + "md5": "18c10179fb6abab2ebaedf9611119b17", + "parent_gene": "", + "protein_md5": "c926b071be2bb64503954a817812997c", + "protein_translation": "MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFTPVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKICPYGLK", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003897" + ], + [ + "gene_synonym", + "ECK1148" + ], + [ + "gene_synonym", + "EcoGene:EG14244" + ], + [ + "gene_synonym", + "GI:16129124" + ], + [ + "gene_synonym", + "GeneID:945733" + ], + [ + "gene_synonym", + "JW1148" + ], + [ + "gene_synonym", + "NP_415679.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75988" + ], + [ + "gene_synonym", + "b1161" + ], + [ + "gene_synonym", + "ycgX" + ] + ], + "dna_sequence": "ATGGATCAGGTCGTTGTTTTTCAAAAGATGTTTGAGCAAGTGAGAAAAGAGCAAAACTTCTCCTGGTTTTATTCAGAATTAAAACATCACCGTATTGCACATTACATTTATTATCTGGCTACGGATAACATCAGAATTATTACTCACGATGATACGGTTTTGTTATTAAGAGGAACCAGGAACCTGTTAAAAGTTAGTACGACCAAGAACCCTGCTAAAATAAAAGAGGCCGCATTGCTTCATATTTGCGGAAAATCTACATTTCGGGAATACTGTTCAACACTGGCAGGCGCGGGCGTTTTCCGGTGGGTTACTGATGTTAATCATAACAAACGCAGTTACTACGCCATTGATAATACGCTTTTATATATTGAAGATGTAGAAAATAATAAACCATTAATCTAG", + "dna_sequence_length": 405, + "functions": [ + "DUF1398 family protein" + ], + "id": "CDS_1140", + "location": [ + [ + "NC_000913", + 1213107, + "-", + 405 + ] + ], + "md5": "882d78f40232200c29a29c4dfdd5398d", + "parent_gene": "", + "protein_md5": "900cd4841f32617ff6290456e98f72a1", + "protein_translation": "MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003900" + ], + [ + "gene_synonym", + "ECK1149" + ], + [ + "gene_synonym", + "EcoGene:EG13886" + ], + [ + "gene_synonym", + "GI:16129125" + ], + [ + "gene_synonym", + "GeneID:945735" + ], + [ + "gene_synonym", + "JW1149" + ], + [ + "gene_synonym", + "NP_415680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75989" + ], + [ + "gene_synonym", + "b1162" + ], + [ + "gene_synonym", + "bluR" + ], + [ + "gene_synonym", + "ycgE" + ] + ], + "dna_sequence": "GTGGCTTATTACAGCATTGGTGATGTTGCTGAACGTTGCGGGATTAATCCTGTCACTCTCCGGGCCTGGCAACGCCGCTACGGTTTGTTAAAACCACAGCGCAGTGAAGGCGGACACCGACTCTTTGATGAAGAAGACATACAACGCATCGAAGAGATCAAGCGTTGGATAAGTAATGGCGTCCCTGTAGGCAAAGTTAAAGCATTACTGGAAACCACCAGCCAGGATACGGAAGATGACTGGAGCCGCCTGCAAGAAGAGATGATGTCAATTCTTCGCATGGCTAATCCTGCCAAACTACGCGCGAGAATTATTTCACTGGGTCGAGAGTACCCAGTAGATCAATTGATTAATCATGTTTACCTTCCTGTTCGCCAGCGTCTCGTGCTTGATCACAACACCTCCCGCATTATGAGCAGTATGTTTGACGGCGCATTAATTGAATACGCAGCAACCTCGCTTTTCGAAATGCGCCGTAAGCCCGGTAAAGAAGCCATTCTGATGGCGTGGAATGTTGAAGAGAGAGCACGATTGTGGCTGGAAGCATGGCGTTTATCATTGTCAGGATGGCACATTTCTGTTCTTGCTGATCCCATTGAATCGCCGCGCCCGGAACTGTTCCCGACGCAAACATTGATTGTCTGGACAGGCATGGCACCAACGAGAAGGCAAAACGAACTTTTACAACACTGGGGTGAGCAAGGTTATAAAGTCATCTTTCATGCCCCCTAA", + "dna_sequence_length": 732, + "functions": [ + "repressor of blue light-responsive genes" + ], + "id": "CDS_1141", + "location": [ + [ + "NC_000913", + 1214059, + "-", + 732 + ] + ], + "md5": "0a5a8fbc5d837610586ad55d159cfb14", + "parent_gene": "", + "protein_md5": "a2ad711b81e7a766683562b6b3d55c0d", + "protein_translation": "MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003903" + ], + [ + "gene_synonym", + "ECK1150" + ], + [ + "gene_synonym", + "EcoGene:EG13887" + ], + [ + "gene_synonym", + "GI:16129126" + ], + [ + "gene_synonym", + "GeneID:947592" + ], + [ + "gene_synonym", + "JW1150" + ], + [ + "gene_synonym", + "NP_415681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75990" + ], + [ + "gene_synonym", + "b1163" + ], + [ + "gene_synonym", + "bluF" + ], + [ + "gene_synonym", + "ycgF" + ] + ], + "dna_sequence": "ATGCTTACCACCCTTATTTATCGTAGCCATATACGTGACGACGAACCTGTCAAAAAAATCGAAGAAATGGTTTCGATAGCAAATCGCAGGAACATGCAGTCTGACGTAACAGGGATCTTACTGTTTAATGGTTCTCATTTTTTCCAGCTTCTGGAAGGTCCGGAAGAACAGGTTAAAATGATATATCGGGCTATATGCCAGGATCCACGGCACTATAATATTGTTGAGCTGCTGTGCGATTACGCGCCTGCTCGCCGTTTTGGCAAAGCGGGAATGGAATTATTTGATTTGCGCCTGCACGAGCGAGATGACGTTTTACAGGCCGTATTCGACAAAGGCACATCAAAATTTCAGCTAACTTATGATGACAGAGCGCTACAATTTTTTCGTACTTTTGTCCTTGCAACCGAACAATCAACCTATTTCGAGATCCCTGCCGAAGACTCCTGGCTTTTTATCGCTGACGGATCTGATAAAGAACTTGATTCCTGTGCCCTTTCACCAACTATAAACGACCACTTTGCCTTTCATCCTATTGTCGATCCCTTATCGCGGCGGATAATCGCTTTTGAAGCCATTGTGCAAAAAAATGAAGATAGCCCATCAGCCATAGCGGTTGGGCAGCGTAAAGACGGGGAAATCTACACAGCGGATCTCAAAAGTAAGGCGCTTGCATTCACGATGGCACACGCACTTGAGCTCGGTGATAAAATGATTTCAATCAATCTATTACCTATGACCCTGGTTAACGAACCTGACGCAGTCTCTTTTTTACTTAATGAAATAAAGGCCAATGCTCTGGTGCCTGAACAAATCATCGTTGAATTTACTGAAAGTGAAGTCATATCTCGGTTTGATGAGTTTGCCGAAGCGATTAAATCGCTAAAGGCTGCTGGTATCAGTGTAGCAATTGATCATTTTGGCGCAGGTTTTGCTGGTTTGTTACTCCTGTCACGCTTCCAGCCTGACAGAATTAAAATCAGTCAGGAATTGATTACCAATGTTCATAAAAGTGGGCCACGGCAGGCAATTATTCAGGCGATCATAAAATGCTGTACATCACTTGAAATTCAAGTCAGTGCTATGGGCGTGGCAACACCAGAAGAGTGGATGTGGCTTGAATCCGCAGGAATTGAGATGTTTCAGGGAGATCTGTTTGCTAAAGCTAAATTGAATGGTATCCCTTCCATAGCGTGGCCAGAGAAAAAATAA", + "dna_sequence_length": 1212, + "functions": [ + "anti-repressor for YcgE, blue light-responsive", + "FAD-binding", + "inactive c-di-GMP phosphodiesterase-like EAL domain protein" + ], + "id": "CDS_1142", + "location": [ + [ + "NC_000913", + 1215475, + "-", + 1212 + ] + ], + "md5": "3c589e5c04d0919525ec8770438d999d", + "parent_gene": "", + "protein_md5": "334cb1989176b9a17bc772a72cd64e84", + "protein_translation": "MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLTYDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFAFHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALELGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003907" + ], + [ + "gene_synonym", + "ECK1151" + ], + [ + "gene_synonym", + "EcoGene:EG14288" + ], + [ + "gene_synonym", + "GI:16129127" + ], + [ + "gene_synonym", + "GeneID:945885" + ], + [ + "gene_synonym", + "JW1151" + ], + [ + "gene_synonym", + "NP_415682.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75991" + ], + [ + "gene_synonym", + "b1164" + ], + [ + "gene_synonym", + "ycgZ" + ] + ], + "dna_sequence": "ATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACACGCGACTGGGGAAGAGGAACAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAA", + "dna_sequence_length": 237, + "functions": [ + "RcsB connector protein for regulation of biofilm and acid-resistance" + ], + "id": "CDS_1143", + "location": [ + [ + "NC_000913", + 1215789, + "+", + 237 + ] + ], + "md5": "9e9ec1ec5360fb7521b888fda284e690", + "parent_gene": "", + "protein_md5": "c513878fbcbc7e2671afafffb0e66fe7", + "protein_translation": "MHQNSVTLDSAGAITRYFAKANLHTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003909" + ], + [ + "gene_synonym", + "ECK1152" + ], + [ + "gene_synonym", + "EcoGene:EG14289" + ], + [ + "gene_synonym", + "GI:16129128" + ], + [ + "gene_synonym", + "GeneID:948991" + ], + [ + "gene_synonym", + "JW1152" + ], + [ + "gene_synonym", + "NP_415683.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75992" + ], + [ + "gene_synonym", + "b1165" + ], + [ + "gene_synonym", + "ymgA" + ] + ], + "dna_sequence": "ATGAAGACATCTGATAATGAACGTATAAAATATGAAATTACTGGCCAGGCGGTGCTCCAGATACTGCGCATGAAGATAAATTTTTCATTGCAGACTCTTATTAAGCAATTACTCGTAATGAAATCGGCTGAGGAAGATGCTTTCCGACGCGATTTAATTGACAGCATAATTCGTGATTTTAGCAATAGTGATTCAGGAGGGCCAAACCGAAGAACAGCGACAGCTGACAATAAAAGTATGTTCAATGGTAAGAAAATAAACAGAATACATTAA", + "dna_sequence_length": 273, + "functions": [ + "RcsB connector protein for regulation of biofilm" + ], + "id": "CDS_1144", + "location": [ + [ + "NC_000913", + 1216068, + "+", + 273 + ] + ], + "md5": "0cb5c37f154051d2ef935dfde640695f", + "parent_gene": "", + "protein_md5": "72b355b5318c29ad381e1510a5a356e6", + "protein_translation": "MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEEDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003911" + ], + [ + "gene_synonym", + "ECK1153" + ], + [ + "gene_synonym", + "EcoGene:EG14290" + ], + [ + "gene_synonym", + "GI:16129129" + ], + [ + "gene_synonym", + "GeneID:945340" + ], + [ + "gene_synonym", + "JW1153" + ], + [ + "gene_synonym", + "NP_415684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75993" + ], + [ + "gene_synonym", + "ariR" + ], + [ + "gene_synonym", + "b1166" + ], + [ + "gene_synonym", + "ymgB" + ] + ], + "dna_sequence": "ATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGATTAGAAAAACACTGGAAATCGTGTTGCGATACACAGCTGATGATATGTAA", + "dna_sequence_length": 267, + "functions": [ + "RcsB connector protein for regulation of biofilm and acid-resistance" + ], + "id": "CDS_1145", + "location": [ + [ + "NC_000913", + 1216369, + "+", + 267 + ] + ], + "md5": "622b848d4482836316f729e212f52806", + "parent_gene": "", + "protein_md5": "baa88cf91a836015b220168f5d77b9c1", + "protein_translation": "MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003915" + ], + [ + "gene_synonym", + "ECK1154" + ], + [ + "gene_synonym", + "EcoGene:EG14291" + ], + [ + "gene_synonym", + "GI:16129130" + ], + [ + "gene_synonym", + "GeneID:945090" + ], + [ + "gene_synonym", + "JW1154" + ], + [ + "gene_synonym", + "NP_415685.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75994" + ], + [ + "gene_synonym", + "b1167" + ], + [ + "gene_synonym", + "ymgC" + ] + ], + "dna_sequence": "ATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAATCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTAG", + "dna_sequence_length": 249, + "functions": [ + "Blue light, low temperature and stress induced protein" + ], + "id": "CDS_1146", + "location": [ + [ + "NC_000913", + 1216748, + "+", + 249 + ] + ], + "md5": "c08ceb0be010ef158f79c01969578e48", + "parent_gene": "", + "protein_md5": "75e97843326a02ca74cc8c04528de6c0", + "protein_translation": "MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003918" + ], + [ + "gene_synonym", + "ECK1155" + ], + [ + "gene_synonym", + "EcoGene:EG13888" + ], + [ + "gene_synonym", + "GI:90111225" + ], + [ + "gene_synonym", + "GeneID:945738" + ], + [ + "gene_synonym", + "JW5174" + ], + [ + "gene_synonym", + "NP_415686.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75995" + ], + [ + "gene_synonym", + "b1168" + ], + [ + "gene_synonym", + "ycgG" + ] + ], + "dna_sequence": "ATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGCTCTGAAACCTCACCTGCGCACAATCATCATTCTCAAACAGGGAATAGTCTGGTGTACATCCCTGCCTGGGAATCGGGTCCTGTTGTCTCGTATTCCTGTTTTCCCGGACAGTAATTTACTGTTGGCTCCAGCAATCGACACCGTTAATAGATTACCTATCCTGCTCTATCAGAACCAATTTGCAGATACGCGCATTTTGGTTACGATAAGCGATCAGCATATTCGTGGGGCACTTAATGTACCCTTGAAAGGGGTAAGGTATGTATTACGCGTGGCGGATGACATTATTGGACCAACGGGTGATGTGATGACGCTTAATGGACATTATCCCTATACCGAGAAGGTTCACTCCACAAAATATCATTTCACTATTATCTTTAACCCGCCGCCACTCTTTAGCTTCTACAGACTTATCGATAAAGGCTTTGGGATTTTAATATTTATTCTGTTAATCGCCTGCGCCGCTGCCTTCCTGCTTGATAGATATTTCAATAAAAGCGCAACGCCTGAAGAGATCCTGCGACGGGCAATAAATAATGGGGAGATCGTCCCTTTTTACCAACCTGTGGTAAATGGTCGGGAAGGGACATTGCGGGGAGTTGAGGTGTTAGCCCGCTGGAAACAACCTCACGGTGGATATATATCACCCGCGGCATTTATTCCACTTGCTGAAAAATCCGGATTAATCGTTCCGCTTACGCAAAGCCTGATGAATCAGGTTGCCAGACAGATGAACGCTATCGCGAGTAAATTGCCGGAAGGTTTTCATATTGGAATTAATTTTAGCGCTTCGCATATTATTTCGCCGACGTTTGTCGACGAGTGTTTAAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCACCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCACTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAGTTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTCGATCAGTATCGTCGCTGAAGGTGTCGAAACGAAAGAACAACTTGACTATCTGAACCAAAATTATATCACATTTCAGCAGGGTTATTATTTCTATAAACCTGTTACATACATCGACCTGGTCAAAATTATCCTTTCTAAACCGAAGGTGAAGGTTGTGGTTGAGTGA", + "dna_sequence_length": 1524, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_1147", + "location": [ + [ + "NC_000913", + 1217328, + "+", + 1524 + ] + ], + "md5": "26c174cb88b5feb4b131071d347f45f1", + "parent_gene": "", + "protein_md5": "82f9806befc551edc8e8bcf95abeb777", + "protein_translation": "MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLDRYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVKIILSKPKVKVVVE", + "protein_translation_length": 507, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285041" + ], + [ + "gene_synonym", + "ECK1156" + ], + [ + "gene_synonym", + "EcoGene:EG14341" + ], + [ + "gene_synonym", + "GI:94541105" + ], + [ + "gene_synonym", + "GeneID:1450253" + ], + [ + "gene_synonym", + "JW1156" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58034" + ], + [ + "gene_synonym", + "YP_588447.1" + ], + [ + "gene_synonym", + "b4520" + ], + [ + "gene_synonym", + "ymgF" + ] + ], + "dna_sequence": "ATGAACAATAGTAATAATCTGGATTATTTCACTCTCTATATCATATTTTCCATTGCATTTATGCTGATCACCCTCCTGGTCATCCTTATTGCAAAACCCAGTACCGGGCTGGGAGAAGTGCTTGTGACGATAAATTTGCTTAATGCCCTTGTTTGGCTGGCGATCAATCTGGTTAATCGATTAAGAGAAAGACTCGTCAACCACAGGGATCAGCAATAA", + "dna_sequence_length": 219, + "functions": [ + "inner membrane division septum protein" + ], + "id": "CDS_1148", + "location": [ + [ + "NC_000913", + 1218983, + "+", + 219 + ] + ], + "md5": "f0b37741d5d33a0f15113502acadae5b", + "parent_gene": "", + "protein_md5": "d0e0e21016eb1a8a16748a9261e74c9d", + "protein_translation": "MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNRLRERLVNHRDQQ", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003921" + ], + [ + "gene_synonym", + "ASAP:ABE-0003924" + ], + [ + "gene_synonym", + "ASAP:ABE-0285092" + ], + [ + "gene_synonym", + "ECK1157" + ], + [ + "gene_synonym", + "EcoGene:EG13889" + ], + [ + "gene_synonym", + "GeneID:2847703" + ], + [ + "gene_synonym", + "JW5176" + ], + [ + "gene_synonym", + "JW5901" + ], + [ + "gene_synonym", + "b4491" + ], + [ + "gene_synonym", + "ycgH" + ] + ], + "dna_sequence": "ATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGACTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTATCTAACCACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACATTGTTACCTCTGGGGAAAATGCAGTAGGTGTTCTTGCATGTTCAAGTCCTGGAGAGTCTCGAACATGTGTCGATGCTGTAGATGATGAAGTTAGTGATTCTAACAGTTACGAAGTTATTAGCCGTGCTGATTTAAAAATGAATGGTGGTTCCATAACAACTAATGGCATTAATAGCTATGGTGCTTATGCTAATGGGAAAAAAGCATATATTAATTTAGATTATGTGGCACTTGAAACTGTGGCTGATGGAAGTTATGCAGTTGCTATTCGACAAGGTAACATTGATATAAAAAATAGTTCTATTACAACAACAGGCACTAAAGCCCCCATTGCAAAAATATACAATGGTGGAGAGTTATTTTTTTCCAATGTCACCGCGGTATCAAAACAAGATAAAGGAATATCAATTGATGCATCAAATATCGATTCTCAAGCCAAAATAGCACTATTAAGTGTTGAACTTTCAAGTGCTTTGGATAGTATTGATGTTAACAAAACTACAACGGATGTAAGTATCCTTAATCGAAGTATTATCACACCTGGTAATAATGTTCTGGTTAATAATACTGGAGGTGACTTAAACATAATTTCGTCCGACTCTATTCTAAATGGAGCGACTAAACTCGTCAGCGGCACAACCACGCTGAAGCTTTCAGAAAATACAATCTGGAATATGAAAGATGACTCCGTTGTTACCCATCTGACTAATTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCGGCTACGGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAGATGCCTTCAGATAAGGTGATGCAAGGATTGCAGCTGGAGCTTTCGAATATCAACTAAAACAACAAGGCAAAAACTGGTATTTGACAAGTTATCAGTCAGTGAATGAGGAGGATAACAGCTCAGAGGGAAATTCAGAATCAACAGAAACGCCTACCCCCGTCCTGCGCCCCGAAGCTGGAAGTTACGTCGCTAACCTGGCAGCTGCTAACACTCTTTTTGTTATGCGTCTGAACGACCGTGCGGGTGAAACGCGCTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGGCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTCAGAGGCTATAGCGCAGGGCTGTATGCCACCTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACATTGACTCCTGGGCGCAATATAGCTGGTTTAAAAACTCGGTGAAAGGGGATGAATTAGCCTATGAATCCTATAGCGCGAAAGGTGCAACCGTCTCGCTGGAAGCGGGTTACGGTTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATATACGTGGATCTTCCAGCCACAGGCACAGGCTATCTGGATGGGCGTCGATCATAATGCGCACACGGAAGCCAATGGCTCACGTATTGAGAATGACGCAAATAACAACATCCAGACCCGACTCGGCTTCCGCACCTTTATTCGTACTCAGGAGAAAAACAGCGGTCCGCACGGTGACGACTTTGAACCTTTTGTTGAAATGAACTGGATCCATAACAGTAAAGATTTTGCTGTCTCAATGAACGGTGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGA", + "dna_sequence_length": 2649, + "id": "CDS_1149", + "location": [ + [ + "NC_000913", + 1219601, + "+", + 2574 + ], + [ + "NC_000913", + 1222174, + "+", + 75 + ] + ], + "md5": "5fdd3085e4e4bbe80b1e5829d8d6db64", + "parent_gene": "", + "protein_md5": "d9d97e7877140de0e10eb608ebd020cd", + "protein_translation": "MKLKKLPGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTEDESHAVKVDDGVTGYINNASVMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGGITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSEKMVNNTRLETTDKTNIVTSGENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYANGKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNVTAVSKQDKGISIDASNIDSQAKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPADAFR", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003926" + ], + [ + "gene_synonym", + "ECK1158" + ], + [ + "gene_synonym", + "EcoGene:EG14292" + ], + [ + "gene_synonym", + "GI:90111226" + ], + [ + "gene_synonym", + "GeneID:945732" + ], + [ + "gene_synonym", + "JW5177" + ], + [ + "gene_synonym", + "NP_415689.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB46" + ], + [ + "gene_synonym", + "b1171" + ], + [ + "gene_synonym", + "ymgD" + ] + ], + "dna_sequence": "ATGAAAAAATTTGCTTTACTGGCGGGCCTGTTTGTTTTCGCACCAATGACCTGGGCGCAGGACTACAATATTAAAAACGGTTTGCCGTCAGAAACCTATATTACTTGCGCAGAAGCCAACGAAATGGCAAAAACTGACAGCGCACAGGTTGCAGAAATTGTTGCGGTAATGGGTAATGCCAGCGTTGCCAGCCGTGATTTAAAAATTGAGCAATCTCCGGAACTGAGCGCCAAAGTGGTAGAAAAACTGAATCAGGTTTGCGCTAAAGACCCGCAAATGCTGTTGATCACGGCAATTGATGACACCATGCGTGCTATCGGCAAAAAATAA", + "dna_sequence_length": 330, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1150", + "location": [ + [ + "NC_000913", + 1222634, + "-", + 330 + ] + ], + "md5": "ec78c156685eb31110c6676038bc96c6", + "parent_gene": "", + "protein_md5": "8b08c833e3518549015b4b6fa73d2b24", + "protein_translation": "MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003928" + ], + [ + "gene_synonym", + "ECK4470" + ], + [ + "gene_synonym", + "EcoGene:EG14415" + ], + [ + "gene_synonym", + "GI:288551664" + ], + [ + "gene_synonym", + "GeneID:945728" + ], + [ + "gene_synonym", + "NP_415690.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q7DFV3" + ], + [ + "gene_synonym", + "b1172" + ], + [ + "gene_synonym", + "ymgG" + ] + ], + "dna_sequence": "TTGAAGAAAAAAATACTTGCCTTCGGGCTTATCTCAGCATTGTTCTGCTCCACGCCAGCGATGGCGGATATGAACCGCACCACGAAAGGTGCATTGCTAGGCGCAGGCGTTGGTTTACTTACTGGCAATGGTGTTAATGGCGTACTGAAAGGTGCAGCTGTTGGCGCTGGTGTTGGTGCAGTAACAGAAAAAGGCCGCGACGGTAAAAATGCGCGTAAAGGTGCAAAAGTGGGTGCCGCCGTTGGTGCTGTCACTGGCGTTCTGACCGGCAATGGCCTCGAAGGGGCGATTAAAGGTGCCGTGATTGGCGGTACGGGTGGTGCAATTCTGGGTAAAATGAAATAA", + "dna_sequence_length": 345, + "functions": [ + "UPF0757 family protein" + ], + "id": "CDS_1151", + "location": [ + [ + "NC_000913", + 1222988, + "-", + 345 + ] + ], + "md5": "f508457064543d5ee609952600c43966", + "parent_gene": "", + "protein_md5": "cf2b857a2dc845589f8a650f1368cc80", + "protein_translation": "MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4403" + ], + [ + "gene_synonym", + "EcoGene:EG14449" + ], + [ + "gene_synonym", + "GI:145698243" + ], + [ + "gene_synonym", + "GeneID:5061515" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A611" + ], + [ + "gene_synonym", + "YP_001165314.1" + ], + [ + "gene_synonym", + "b4593" + ], + [ + "gene_synonym", + "ymgI" + ] + ], + "dna_sequence": "ATGAGTTATTCCTCATTTAAGATTATTCTCATTCACGTAAAAAACATAATTCCTATCATCACAGCCACGCTCATTTTGAATTATCTGAATAATAGCGAGCGTTCTTTAGTTAAGCAGATCTTAATTGAAGACGAAATTATTGTGTGTGCAACTTACTTAATACCGGACATCTAA", + "dna_sequence_length": 174, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1152", + "location": [ + [ + "NC_000913", + 1223163, + "-", + 174 + ] + ], + "md5": "886731616026e91b46eda16ee7f35ba5", + "parent_gene": "", + "protein_md5": "12dd2edc296cfeb8f6989d3ea4e72b36", + "protein_translation": "MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIEDEIIVCATYLIPDI", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4404" + ], + [ + "gene_synonym", + "EcoGene:EG14450" + ], + [ + "gene_synonym", + "GI:145698244" + ], + [ + "gene_synonym", + "GeneID:5061516" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A612" + ], + [ + "gene_synonym", + "YP_001165315.1" + ], + [ + "gene_synonym", + "b4594" + ], + [ + "gene_synonym", + "ymgJ" + ] + ], + "dna_sequence": "GTGAGCAGAAGATATTCATCAGCAACGATTACATTAGTCATTTTATTTTGCCGACGGCCTCATTGTCGAAAGATAAGCGTACGACAGTATTATCAGAAAAGAGTGATTTTTTATCCAACTACACTTCAGCGCACTGCGTGTAAAAAATGCCTCTTTCTTATGCGGGATATCATCATTTCATCATGA", + "dna_sequence_length": 186, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1153", + "location": [ + [ + "NC_000913", + 1223264, + "+", + 186 + ] + ], + "md5": "61aeec61ff8e55e526466f202fb3932b", + "parent_gene": "", + "protein_md5": "57114dc46a2efcd888340d776078662f", + "protein_translation": "MSRRYSSATITLVILFCRRPHCRKISVRQYYQKRVIFYPTTLQRTACKKCLFLMRDIIISS", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003933" + ], + [ + "gene_synonym", + "ASAP:ABE-0285042" + ], + [ + "gene_synonym", + "ECK1161" + ], + [ + "gene_synonym", + "EcoGene:EG13890" + ], + [ + "gene_synonym", + "GeneID:1450255" + ], + [ + "gene_synonym", + "JW1162" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76000" + ], + [ + "gene_synonym", + "b4521" + ], + [ + "gene_synonym", + "ycgI" + ], + [ + "gene_synonym", + "ymgH" + ] + ], + "dna_sequence": "TATCATTTATCCAATGGCATGGAATCGAAATCAGTCGATACCCGCAGTATATATCGTGAACTGGGTGCAACGCTGAGTTACAACATGCGCCTGGGGAACGGTATGGAAAATGAACCCTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAGGTGAATAATGACGGTAATTTCGTCAATGATTTGTCGGGCAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGA", + "dna_sequence_length": 345, + "id": "CDS_1154", + "location": [ + [ + "NC_000913", + 1223564, + "+", + 108 + ], + [ + "NC_000913", + 1223671, + "+", + 237 + ] + ], + "md5": "62fdbd21a830ad3edc805cd34ef28e8d", + "parent_gene": "", + "protein_md5": "8e47d9b6868221fd8bb6d2bb8c3816ea", + "protein_translation": "YHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMENEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003935" + ], + [ + "gene_synonym", + "ECK1162" + ], + [ + "gene_synonym", + "EcoGene:EG10598" + ], + [ + "gene_synonym", + "GI:16129137" + ], + [ + "gene_synonym", + "GeneID:945740" + ], + [ + "gene_synonym", + "JW1163" + ], + [ + "gene_synonym", + "NP_415692.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A734" + ], + [ + "gene_synonym", + "b1174" + ], + [ + "gene_synonym", + "minB" + ], + [ + "gene_synonym", + "minE" + ] + ], + "dna_sequence": "ATGGCATTACTCGATTTCTTTCTCTCGCGGAAGAAAAACACAGCCAACATTGCAAAAGAACGGCTGCAGATTATTGTTGCTGAACGCCGTCGCAGCGATGCAGAACCGCATTATCTGCCGCAGTTGCGTAAAGATATTCTTGAGGTCATTTGTAAATACGTACAAATTGATCCTGAGATGGTAACCGTACAGCTTGAGCAAAAAGATGGCGATATTTCTATTCTTGAGCTGAACGTGACCTTACCGGAAGCAGAAGAGCTGAAATAA", + "dna_sequence_length": 267, + "functions": [ + "cell division topological specificity factor" + ], + "id": "CDS_1155", + "location": [ + [ + "NC_000913", + 1224545, + "-", + 267 + ] + ], + "md5": "9994dbc0a469bc84d0ba80f26afb4c92", + "parent_gene": "", + "protein_md5": "48e12cecac761e9a37f181be663a4bfe", + "protein_translation": "MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003938" + ], + [ + "gene_synonym", + "ECK1163" + ], + [ + "gene_synonym", + "EcoGene:EG10597" + ], + [ + "gene_synonym", + "GI:16129138" + ], + [ + "gene_synonym", + "GeneID:945741" + ], + [ + "gene_synonym", + "JW1164" + ], + [ + "gene_synonym", + "NP_415693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEZ3" + ], + [ + "gene_synonym", + "b1175" + ], + [ + "gene_synonym", + "minB" + ], + [ + "gene_synonym", + "minD" + ] + ], + "dna_sequence": "ATGGCACGCATTATTGTTGTTACTTCGGGCAAAGGGGGTGTTGGTAAGACAACCTCCAGCGCGGCCATCGCCACTGGTTTGGCCCAGAAGGGAAAGAAAACTGTCGTGATAGATTTTGATATCGGCCTGCGTAATCTCGACCTGATTATGGGTTGTGAACGCCGGGTCGTTTACGATTTCGTCAACGTCATTCAGGGCGATGCAACGCTAAATCAGGCGTTAATTAAAGATAAGCGTACTGAAAATCTCTATATTCTGCCGGCATCGCAAACACGCGATAAAGATGCCCTCACCCGTGAAGGGGTCGCCAAAGTTCTTGATGATCTGAAAGCGATGGATTTTGAATTTATCGTTTGTGACTCCCCGGCAGGGATTGAAACCGGTGCGTTAATGGCACTCTATTTTGCAGACGAAGCCATTATTACCACCAACCCGGAAGTCTCCTCAGTACGCGACTCTGACCGTATTTTAGGCATTCTGGCGTCGAAATCACGCCGCGCAGAAAATGGCGAAGAGCCTATTAAAGAGCACCTGCTGTTAACGCGCTATAACCCAGGCCGCGTAAGCAGAGGTGACATGCTGAGCATGGAAGATGTGCTGGAGATCCTGCGCATCAAACTCGTCGGCGTGATCCCAGAGGATCAATCAGTATTGCGCGCCTCTAACCAGGGTGAACCGGTCATTCTCGACATTAACGCCGATGCGGGTAAAGCCTACGCAGATACCGTAGAACGTCTGTTGGGAGAAGAACGTCCTTTCCGCTTCATTGAAGAAGAGAAGAAAGGCTTCCTCAAACGCTTGTTCGGAGGATAA", + "dna_sequence_length": 813, + "functions": [ + "inhibitor of FtsZ ring polymerization", + "chromosome-membrane tethering protein", + "membrane ATPase of the MinCDEE system" + ], + "id": "CDS_1156", + "location": [ + [ + "NC_000913", + 1225361, + "-", + 813 + ] + ], + "md5": "646f8824203a85b5e45bbdd61003b71d", + "parent_gene": "", + "protein_md5": "9d5029004b702bc54723daa4db8308a8", + "protein_translation": "MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003941" + ], + [ + "gene_synonym", + "ECK1164" + ], + [ + "gene_synonym", + "EcoGene:EG10596" + ], + [ + "gene_synonym", + "GI:16129139" + ], + [ + "gene_synonym", + "GeneID:945744" + ], + [ + "gene_synonym", + "JW1165" + ], + [ + "gene_synonym", + "NP_415694.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18196" + ], + [ + "gene_synonym", + "b1176" + ], + [ + "gene_synonym", + "minB" + ], + [ + "gene_synonym", + "minC" + ] + ], + "dna_sequence": "ATGTCAAACACGCCAATCGAGCTTAAAGGCAGTAGCTTCACTTTATCTGTGGTTCATCTGCATGAGGCAGAACCTAAGGTTATCCATCAGGCGCTGGAAGACAAAATCGCTCAGGCCCCCGCATTTTTAAAACATGCCCCCGTTGTACTCAACGTCAGTGCACTGGAAGACCCGGTAAACTGGTCAGCGATGCATAAGGCGGTTTCGGCAACCGGTTTGCGGGTTATTGGCGTAAGTGGCTGCAAAGATGCGCAACTTAAAGCCGAAATTGAAAAGATGGGGCTGCCTATCCTGACGGAAGGAAAGGAAAAAGCGCCACGTCCAGCTCCCACACCGCAGGCTCCAGCGCAAAATACAACGCCGGTCACAAAAACGCGTTTAATAGATACCCCGGTGCGTTCCGGTCAGCGTATTTATGCTCCACAATGTGATCTGATTGTTACAAGCCACGTTAGCGCTGGGGCCGAATTGATTGCCGATGGGAACATTCATGTCTATGGCATGATGCGCGGTCGTGCGCTGGCAGGGGCAAGTGGTGACCGGGAAACGCAAATATTTTGTACGAACCTGATGGCGGAACTGGTGTCCATCGCAGGTGAATACTGGCTGAGTGATCAAATCCCAGCAGAATTTTATGGCAAAGCGGCGCGACTGCAGTTAGTCGAAAACGCTTTGACCGTTCAACCGTTAAATTGA", + "dna_sequence_length": 696, + "functions": [ + "inhibitor of FtsZ ring polymerization" + ], + "id": "CDS_1157", + "location": [ + [ + "NC_000913", + 1226080, + "-", + 696 + ] + ], + "md5": "60aa4960f4a455e5e1b80d79ebb0ce4b", + "parent_gene": "", + "protein_md5": "00362c4b422b83dc24b4840c36ce5767", + "protein_translation": "MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPTPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003946" + ], + [ + "gene_synonym", + "ECK1165" + ], + [ + "gene_synonym", + "EcoGene:EG13891" + ], + [ + "gene_synonym", + "GI:16129140" + ], + [ + "gene_synonym", + "GeneID:946155" + ], + [ + "gene_synonym", + "JW1166" + ], + [ + "gene_synonym", + "NP_415695.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76001" + ], + [ + "gene_synonym", + "b1177" + ], + [ + "gene_synonym", + "ycgJ" + ] + ], + "dna_sequence": "ATGAATATGATGCGTATTTTTTATATCGGATTGTCAGGTGTGGGGATGATGTTCTCATCAATGGCGTCTGGAAATGACGCTGGCGGACTTCAATCTCCGGCGTGCGGCGTTGTTTGCGACCCGTATATTTGTGTGAACTCAGATGGCATTTCCCCAGAGTTAACAAGGAAATATCTCGGCGAAAAAGCCGCTGAAAACTTACAATCATTACAAGGCTACGATCCCAGCGAATTTACATTCGCTAACGGTGTATTTTGCGATGTTAAAGAAAAATTATGTCGTGATGATCGTTATTTTGGTGTGGATGGTAAGCGGAGTGGAAAAATCAATCAAACCACCACAAAGATGTTATTTATGTGTCGTGAGTGA", + "dna_sequence_length": 369, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1158", + "location": [ + [ + "NC_000913", + 1226600, + "+", + 369 + ] + ], + "md5": "cd9f13b502dbd4ca22718e009def6706", + "parent_gene": "", + "protein_md5": "cc45c1a3a8952b8417341d5084001975", + "protein_translation": "MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003948" + ], + [ + "gene_synonym", + "ECK1166" + ], + [ + "gene_synonym", + "EcoGene:EG13892" + ], + [ + "gene_synonym", + "GI:16129141" + ], + [ + "gene_synonym", + "GeneID:946963" + ], + [ + "gene_synonym", + "JW1167" + ], + [ + "gene_synonym", + "NP_415696.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76002" + ], + [ + "gene_synonym", + "b1178" + ], + [ + "gene_synonym", + "pliG" + ], + [ + "gene_synonym", + "ycgK" + ] + ], + "dna_sequence": "ATGAAAATCAAGAGCATCAGGAAGGCTGTATTGCTGCTTGCACTGCTAACCTCCACGAGCTTTGCTGCGGGTAAGAATGTCAATGTTGAGTTCAGAAAAGGCCATAGCAGCGCTCAGTACTCCGGCGAAATAAAGGGATACGATTACGATACATATACCTTCTATGCCAAAAAAGGTCAGAAAGTGCATGTGAGTATCTCTAATGAAGGCGCTGATACTTACCTCTTCGGGCCAGGAATCGATGATTCAGTTGATTTATCCAGATATTCCCCAGAACTCGATAGTCACGGACAATACTCACTCCCTGCTTCTGGCAAATATGAGCTGCGAGTGTTGCAAACCCGAAACGACGCCCGTAAAAACAAAACTAAAAAATATAACGTCGATATTCAAATTAAGTAA", + "dna_sequence_length": 402, + "functions": [ + "periplasmic inhibitor of g-type lysozyme" + ], + "id": "CDS_1159", + "location": [ + [ + "NC_000913", + 1227472, + "-", + 402 + ] + ], + "md5": "e48d8194361ee5570067b2e92a40398b", + "parent_gene": "", + "protein_md5": "12d5e3d642271de381a19ec3bb6812eb", + "protein_translation": "MKIKSIRKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEIKGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARKNKTKKYNVDIQIK", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003954" + ], + [ + "gene_synonym", + "ECK1167" + ], + [ + "gene_synonym", + "EcoGene:EG13893" + ], + [ + "gene_synonym", + "GI:308209620" + ], + [ + "gene_synonym", + "GeneID:946226" + ], + [ + "gene_synonym", + "JW1168" + ], + [ + "gene_synonym", + "NP_415697.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB43" + ], + [ + "gene_synonym", + "b1179" + ], + [ + "gene_synonym", + "ycgL" + ] + ], + "dna_sequence": "ATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTTCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATGCCGATATTGAAAAGGTTAAACAGGCATTAACCGAGCAAGGTTACTATTTGCAGTTACCGCCACCACCCGAAGATTTGCTGAAGCAACATCTTTCCGTCATGGGGCAGAAAACAGACGACACTAACAAATAA", + "dna_sequence_length": 294, + "functions": [ + "UPF0745 family protein" + ], + "id": "CDS_1160", + "location": [ + [ + "NC_000913", + 1227714, + "+", + 294 + ] + ], + "md5": "8143fc3aba9542a3ea6e71715d0cc1f8", + "parent_gene": "", + "protein_md5": "dbd96ae06c20d176e465415f8123eb06", + "protein_translation": "MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKVKQALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003957" + ], + [ + "gene_synonym", + "ECK1168" + ], + [ + "gene_synonym", + "EcoGene:EG13894" + ], + [ + "gene_synonym", + "GI:16129143" + ], + [ + "gene_synonym", + "GeneID:946115" + ], + [ + "gene_synonym", + "JW1169" + ], + [ + "gene_synonym", + "NP_415698.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76004" + ], + [ + "gene_synonym", + "b1180" + ], + [ + "gene_synonym", + "ycgM" + ] + ], + "dna_sequence": "ATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAGGCTACGGAAGAGCATGTCCGCAAAGCCATTGCCGGTTATGGCGTGGCGCTCGATCTGACATTGCGTGATGTTCAGGGAAAAATGAAGAAAGCCGGGCAGCCGTGGGAAAAGGCTAAAGCGTTTGATAACTCTTGTCCGCTTTCCGGGTTTATTCCCGCGGCGGAATTTACCGGCGACCCGCAAAATACAACGCTGAGCCTGAGCGTAAACGGCGAACAACGCCAGCAAGGTACGACTGCGGACATGATCCATAAAATCGTTCCGCTGATCGCTTATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAA", + "dna_sequence_length": 660, + "functions": [ + "putative isomerase/hydrolase" + ], + "id": "CDS_1161", + "location": [ + [ + "NC_000913", + 1228079, + "+", + 660 + ] + ], + "md5": "8eb03935d03a23b398ba0b4c7b170713", + "parent_gene": "", + "protein_md5": "e48a5bef1106a8f9761d1c9519a53ac7", + "protein_translation": "MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQGTTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRVL", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003960" + ], + [ + "gene_synonym", + "ECK1169" + ], + [ + "gene_synonym", + "EcoGene:EG13895" + ], + [ + "gene_synonym", + "GI:145698245" + ], + [ + "gene_synonym", + "GeneID:945804" + ], + [ + "gene_synonym", + "JW5180" + ], + [ + "gene_synonym", + "NP_415699.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8L5" + ], + [ + "gene_synonym", + "b1181" + ], + [ + "gene_synonym", + "ycgN" + ] + ], + "dna_sequence": "ATGGCGGAACACCTGATGAGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTCGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAGGTAAAGATTTACCTGCGTGGCATCCGCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGA", + "dna_sequence_length": 462, + "functions": [ + "UPF0153 family cysteine cluster protein" + ], + "id": "CDS_1162", + "location": [ + [ + "NC_000913", + 1228815, + "+", + 462 + ] + ], + "md5": "7571ea25cea3d807d2a214bd6a61a57b", + "parent_gene": "", + "protein_md5": "d73848551f0d39113c9ab657dde8811a", + "protein_translation": "MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003962" + ], + [ + "gene_synonym", + "ECK1170" + ], + [ + "gene_synonym", + "EcoGene:EG13243" + ], + [ + "gene_synonym", + "GI:162135899" + ], + [ + "gene_synonym", + "GeneID:945745" + ], + [ + "gene_synonym", + "JW5181" + ], + [ + "gene_synonym", + "NP_415700.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77335" + ], + [ + "gene_synonym", + "b1182" + ], + [ + "gene_synonym", + "clyA" + ], + [ + "gene_synonym", + "hlyE" + ], + [ + "gene_synonym", + "hpr" + ], + [ + "gene_synonym", + "sheA" + ], + [ + "gene_synonym", + "ycgD" + ] + ], + "dna_sequence": "ATGACTGAAATCGTTGCAGATAAAACGGTAGAAGTAGTTAAAAACGCAATCGAAACCGCAGATGGAGCATTAGATCTTTATAATAAATATCTCGATCAGGTCATCCCCTGGCAGACCTTTGATGAAACCATAAAAGAGTTAAGTCGCTTTAAACAGGAGTATTCACAGGCAGCCTCCGTTTTAGTCGGCGATATTAAAACCTTACTTATGGATAGCCAGGATAAGTATTTTGAAGCAACCCAAACAGTGTATGAATGGTGTGGTGTTGCGACGCAATTGCTCGCAGCGTATATTTTGCTATTTGATGAGTACAATGAGAAGAAAGCATCCGCCCAGAAAGACATTCTCATTAAGGTACTGGATGACGGCATCACGAAGCTGAATGAAGCGCAAAAATCCCTGCTGGTAAGCTCACAAAGTTTCAACAACGCTTCCGGGAAACTGCTGGCGTTAGATAGCCAGTTAACCAATGATTTTTCAGAAAAAAGCAGCTATTTCCAGTCACAGGTAGATAAAATCAGGAAGGAAGCATATGCCGGTGCCGCAGCCGGTGTCGTCGCCGGTCCATTTGGATTAATCATTTCCTATTCTATTGCTGCGGGCGTAGTTGAAGGAAAACTGATTCCAGAATTGAAGAACAAGTTAAAATCTGTGCAGAATTTCTTTACCACCCTGTCTAACACGGTTAAACAAGCGAATAAAGATATCGATGCCGCCAAATTGAAATTAACCACCGAAATAGCCGCCATCGGTGAGATAAAAACGGAAACTGAAACAACCAGATTCTACGTTGATTATGATGATTTAATGCTTTCTTTGCTAAAAGAAGCGGCCAAAAAAATGATTAACACCTGTAATGAGTATCAGAAAAGACACGGTAAAAAGACACTCTTTGAGGTACCTGAAGTCTGA", + "dna_sequence_length": 912, + "functions": [ + "hemolysin E" + ], + "id": "CDS_1163", + "location": [ + [ + "NC_000913", + 1230394, + "-", + 912 + ] + ], + "md5": "0866457872021f727e30d2d82147486f", + "parent_gene": "", + "protein_md5": "4323aef8aaf07a46c6b111e4c4c6c708", + "protein_translation": "MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVAGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHGKKTLFEVPEV", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003974" + ], + [ + "gene_synonym", + "ECK1171" + ], + [ + "gene_synonym", + "EcoGene:EG11057" + ], + [ + "gene_synonym", + "GI:16129146" + ], + [ + "gene_synonym", + "GeneID:945746" + ], + [ + "gene_synonym", + "JW1172" + ], + [ + "gene_synonym", + "NP_415701.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG11" + ], + [ + "gene_synonym", + "b1183" + ], + [ + "gene_synonym", + "umuD" + ] + ], + "dna_sequence": "ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCCTTCACCGGCAGCAGATTACGTTGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTACTTCGTCAAAGCAAGTGGTGATTCTATGATTGATGGTGGAATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCCAGCCATGGTGATATTGTCATCGCTGCTGTTGACGGCGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCTTATTCCCATGAACAGCGCGTACTCGCCCATTACCATCAGTAGTGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACGTCGTTAAGGCGATGCGCTGA", + "dna_sequence_length": 420, + "functions": [ + "translesion error-prone DNA polymerase V subunit", + "RecA-activated auto-protease" + ], + "id": "CDS_1164", + "location": [ + [ + "NC_000913", + 1230767, + "+", + 420 + ] + ], + "md5": "6ab3dd92c1f18be1c7f6d911d0627628", + "parent_gene": "", + "protein_md5": "bbb3d5be73690fd3d4a5747d85eea991", + "protein_translation": "MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003977" + ], + [ + "gene_synonym", + "ECK1172" + ], + [ + "gene_synonym", + "EcoGene:EG11056" + ], + [ + "gene_synonym", + "GI:16129147" + ], + [ + "gene_synonym", + "GeneID:946359" + ], + [ + "gene_synonym", + "JW1173" + ], + [ + "gene_synonym", + "NP_415702.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04152" + ], + [ + "gene_synonym", + "b1184" + ], + [ + "gene_synonym", + "umuC" + ], + [ + "gene_synonym", + "uvm" + ] + ], + "dna_sequence": "ATGTTTGCCCTCTGTGATGTAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCCGAAACGCTGAGGCAAAGGCGCTTGGCGTTAAAATGGGCGATCCCTGGTTCAAACAAAAAGATCTGTTTCGTCGCTGTGGCGTGGTTTGCTTTAGCAGCAATTATGAGCTTTACGCAGACATGAGCAATCGGGTGATGTCGACGCTGGAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTCTGGGGGATTGGACGGCGGATCAGCAAAAAACTGGACGCGATGGGGATCAAAACCGTTCTCGATTTGGCGGATACAGATATCCGGTTTATCCGTAAACATTTTAATGTCGTGCTCGAAAGAACGGTGCGTGAACTGCGCGGCGAACCCTGTTTGCAACTGGAAGAGTTTGCACCGACGAAGCAGGAAATTATCTGTTCCCGCTCGTTTGGTGAACGCATCACGGATTATCCGTCGATGCGGCAGGCCATTTGTAGTTACGCTGCCCGGGCGGCGGAAAAACTTCGCAGCGAGCATCAATATTGTCGGTTTATCTCCACGTTTATTAAGACGTCACCATTTGCGCTCAATGAACCTTATTACGGCAATAGCGCGTCGGTAAAACTGCTGACGCCCACTCAGGACAGCAGGGATATCATTAACGCTGCTACGCGATCTCTGGATGCCATCTGGCAAGCGGGCCATCGTTACCAAAAAGCGGGCGTGATGCTGGGGGATTTCTTCAGTCAGGGAGTCGCGCAGCTCAATTTATTCGATGACAACGCACCGCGCCCCGGGAGTGAGCAATTGATGACGGTAATGGATACACTGAATGCTAAAGAGGGCAGAGGAACACTCTATTTTGCCGGGCAGGGGATCCAGCAACAATGGCAGATGAAGCGAGCCATGCTTTCACCACGTTATACAACGCGAAGTTCTGATTTACTGAGGGTCAAATAA", + "dna_sequence_length": 1269, + "functions": [ + "translesion error-prone DNA polymerase V subunit", + "DNA polymerase activity" + ], + "id": "CDS_1165", + "location": [ + [ + "NC_000913", + 1231186, + "+", + 1269 + ] + ], + "md5": "e41a887e5aad81672866067c76f4c5bb", + "parent_gene": "", + "protein_md5": "56056a66c50431c735fd00b444bdc0bb", + "protein_translation": "MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK", + "protein_translation_length": 422, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003979" + ], + [ + "gene_synonym", + "ECK1173" + ], + [ + "gene_synonym", + "EcoGene:EG11393" + ], + [ + "gene_synonym", + "GI:49176085" + ], + [ + "gene_synonym", + "GeneID:946344" + ], + [ + "gene_synonym", + "JW5182" + ], + [ + "gene_synonym", + "NP_415703.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6M2" + ], + [ + "gene_synonym", + "b1185" + ], + [ + "gene_synonym", + "dsbB" + ], + [ + "gene_synonym", + "dsbX" + ], + [ + "gene_synonym", + "iarB" + ], + [ + "gene_synonym", + "roxB" + ], + [ + "gene_synonym", + "ycgA" + ] + ], + "dna_sequence": "ATGTTGCGATTTTTGAACCAATGTTCACAAGGCCGGGGCGCGTGGCTGTTGATGGCGTTTACTGCTCTGGCACTGGAACTGACGGCGCTGTGGTTCCAGCATGTGATGTTACTGAAACCTTGCGTGCTCTGTATTTATGAACGCTGCGCGTTATTCGGCGTTCTGGGTGCTGCGCTGATTGGCGCGATCGCCCCGAAAACTCCGCTGCGTTATGTAGCGATGGTTATCTGGTTGTATAGTGCGTTCCGCGGTGTGCAGTTAACTTACGAGCACACCATGCTTCAGCTCTATCCTTCGCCGTTTGCCACCTGTGATTTTATGGTTCGTTTCCCGGAATGGCTGCCGCTGGATAAGTGGGTGCCGCAAGTGTTTGTCGCCTCTGGCGATTGCGCCGAGCGTCAGTGGGATTTTTTAGGTCTGGAAATGCCGCAGTGGCTGCTCGGTATTTTTATCGCTTACCTGATTGTCGCAGTGCTGGTGGTGATTTCCCAGCCGTTTAAAGCGAAAAAACGTGATCTGTTCGGTCGCTAA", + "dna_sequence_length": 531, + "functions": [ + "oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I" + ], + "id": "CDS_1166", + "location": [ + [ + "NC_000913", + 1233030, + "-", + 531 + ] + ], + "md5": "e242d8a1ed243dfd9819455d6cb3fe88", + "parent_gene": "", + "protein_md5": "71b318e3416255f0ca55231b2ea90530", + "protein_translation": "MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003984" + ], + [ + "gene_synonym", + "ECK1174" + ], + [ + "gene_synonym", + "EcoGene:EG11392" + ], + [ + "gene_synonym", + "GI:16129149" + ], + [ + "gene_synonym", + "GeneID:944822" + ], + [ + "gene_synonym", + "JW1175" + ], + [ + "gene_synonym", + "NP_415704.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA7" + ], + [ + "gene_synonym", + "b1186" + ], + [ + "gene_synonym", + "nhaB" + ] + ], + "dna_sequence": "ATGGAGATCTCCTGGGGCCGCGCGCTATGGCGCAATTTTTTGGGCCAGTCCCCCGACTGGTACAAACTCGCCCTCATCATTTTCTTAATCGTAAACCCGTTAATTTTCCTCATCAGCCCTTTCGTCGCGGGCTGGTTGCTGGTAGCGGAATTTATTTTCACTCTGGCGATGGCCCTGAAATGCTACCCGCTGCTCCCCGGTGGTCTGTTGGCTATCGAAGCGGTATTCATCGGCATGACCAGCGCGGAACACGTCCGTGAAGAGGTGGCGGCAAATCTTGAAGTCTTGCTGTTACTGATGTTTATGGTGGCGGGTATCTATTTTATGAAACAGCTGTTGCTGTTCATATTTACCCGTTTGCTGTTAAGCATTCGCTCCAAAATGCTGCTGTCGCTCTCTTTTTGCGTGGCGGCTGCGTTCCTCTCCGCGTTCCTCGATGCCTTAACCGTCGTGGCGGTGGTGATCAGCGTTGCAGTCGGTTTTTATGGTATTTATCACCGCGTAGCCTCTTCCCGTACCGAAGACACCGACCTGCAAGACGATAGTCATATCGACAAGCATTACAAAGTGGTTCTGGAACAGTTCCGTGGCTTTCTGCGTAGCCTGATGATGCATGCCGGTGTCGGCACCGCATTAGGCGGCGTAATGACCATGGTGGGCGAACCACAGAACCTGATCATCGCTAAAGCGGCTGGCTGGCATTTTGGCGATTTCTTCCTGCGCATGTCGCCGGTGACCGTTCCGGTTCTGATTTGTGGCCTGTTAACCTGCCTGCTGGTAGAGAAGCTGCGTTGGTTTGGCTACGGTGAAACGCTGCCGGAGAAAGTCCGCGAAGTGTTGCAACAGTTTGACGATCAAAGCCGCCACCAGCGTACCCGTCAGGATAAAATCCGTCTGATTGTCCAGGCGATTATTGGCGTCTGGCTGGTGACTGCGCTGGCGTTGCATCTGGCGGAAGTTGGCTTGATTGGTTTGTCAGTCATTATTCTGGCAACATCATTGACCGGTGTCACCGATGAGCATGCTATCGGTAAAGCCTTCACCGAATCTCTGCCATTCACCGCACTGTTGACGGTGTTTTTCTCGGTAGTCGCGGTGATTATCGACCAACAACTGTTTTCGCCAATTATTCAGTTTGTGTTGCAGGCATCGGAACATGCTCAGCTGTCGCTGTTCTATATTTTCAACGGTCTGCTGTCATCCATTTCGGATAACGTCTTCGTGGGGACGATTTATATCAACGAAGCGAAAGCGGCAATGGAAAGTGGCGCTATCACGTTGAAGCAATACGAGCTGCTGGCGGTCGCCATTAATACCGGTACCAATCTGCCCTCCGTCGCTACGCCGAACGGTCAGGCTGCGTTCCTGTTCCTGCTGACCTCTGCACTCGCGCCATTGATTCGCCTCTCTTATGGCCGCATGGTGTGGATGGCCCTGCCTTACACCCTCGTCCTGACACTCGTCGGCTTGCTCTGCGTCGAGTTTACGCTTGCCCCTGTAACCGAATGGTTTATGCAAATGGGCTGGATAGCAACGCTTTGA", + "dna_sequence_length": 1542, + "functions": [ + "sodium:proton antiporter" + ], + "id": "CDS_1167", + "location": [ + [ + "NC_000913", + 1234717, + "-", + 1542 + ] + ], + "md5": "06fe7121d67b80a514603927d22b75a7", + "parent_gene": "", + "protein_md5": "e3552b4ea6d8fd8fd8efafa5032cb82a", + "protein_translation": "MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAGWLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMGWIATL", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003988" + ], + [ + "gene_synonym", + "ECK1175" + ], + [ + "gene_synonym", + "EcoGene:EG10281" + ], + [ + "gene_synonym", + "GI:16129150" + ], + [ + "gene_synonym", + "GeneID:948652" + ], + [ + "gene_synonym", + "JW1176" + ], + [ + "gene_synonym", + "NP_415705.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8V6" + ], + [ + "gene_synonym", + "b1187" + ], + [ + "gene_synonym", + "dec" + ], + [ + "gene_synonym", + "fadR" + ], + [ + "gene_synonym", + "ole" + ], + [ + "gene_synonym", + "oleR" + ], + [ + "gene_synonym", + "thdB" + ] + ], + "dna_sequence": "ATGGTCATTAAGGCGCAAAGCCCGGCGGGTTTCGCGGAAGAGTACATTATTGAAAGTATCTGGAATAACCGCTTCCCTCCCGGGACTATTTTGCCCGCAGAACGTGAACTTTCAGAATTAATTGGCGTAACGCGTACTACGTTACGTGAAGTGTTACAGCGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTACCACAAACTGTCGGCGTTGTGCAGTGAAGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAA", + "dna_sequence_length": 720, + "functions": [ + "fatty acid metabolism regulon transcriptional regulator" + ], + "id": "CDS_1168", + "location": [ + [ + "NC_000913", + 1234938, + "+", + 720 + ] + ], + "md5": "f35ee20159f39a65e04ffedebbcc4d53", + "parent_gene": "", + "protein_md5": "48835af5c3e5c8f2b7aba321dfbe6aff", + "protein_translation": "MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003990" + ], + [ + "gene_synonym", + "ECK1176" + ], + [ + "gene_synonym", + "EcoGene:EG11516" + ], + [ + "gene_synonym", + "GI:16129151" + ], + [ + "gene_synonym", + "GeneID:946365" + ], + [ + "gene_synonym", + "JW1177" + ], + [ + "gene_synonym", + "NP_415706.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29013" + ], + [ + "gene_synonym", + "b1188" + ], + [ + "gene_synonym", + "ycgB" + ] + ], + "dna_sequence": "ATGGCGACGATCGATTCTATGAATAAGGACACCACACGTTTGAGCGATGGACCCGACTGGACGTTCGACCTGCTGGATGTTTATCTGGCAGAGATAGACCGGGTGGCGAAACTCTACCGGCTGGATACCTACCCGCACCAGATTGAAGTGATAACCTCAGAACAGATGATGGATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTACCGAGTGCGAAGAGCGTTATGGCGTTGATGAAGTAGAACGGCTTCTGGACTCGTGCCACGCGCTGATGAACTACGGCGTGGACCGGTACAAACGCCCGCAAAAAATCTCGCTGCAAGAAGAGAAAGCCCGGCAGAAAAGTCGCGAAGAGTATCTGCAAAGTCAGGTCAATATGCTCTGGCGTACCCTGCCGAAGCGCGAGGAAGAGAAAACGGTTGCTGAAGCGCGCCGCTATCCGTCCGAACCACAAGAAAACCTGCTCTATTTTATGGAGAAAAATGCGCCACTGCTGGAATCATGGCAGCGTGAAATCCTGCGTATTGTGCGTAAGGTGAGCCAGTATTTTTATCCGCAAAAACAGACTCAGGTGATGAACGAAGGCTGGGCGACCTTCTGGCACTACACCATCCTTAACCATCTGTATGATGAAGGGAAAGTAACGGAACGTTTTATGCTGGAGTTTTTGCACAGCCACACCAATGTGGTCTTCCAGCCCCCCTATAACAGCCCGTGGTACAGCGGCATCAACCCGTATGCCCTCGGGTTCGCCATGTTCCAGGATATTAAACGGATTTGTCAGTCGCCAACGGAAGAAGACAAATACTGGTTCCCGGATATCGCCGGTTCCGACTGGCTGGAAACGCTGCATTTCGCGATGCGTGATTTCAAAGATGAGAGTTTTATCAGCCAGTTCCTGTCACCGAAAGTGATGCGTGATTTCCGCTTCTTCACCGTGCTGGATGACGATCGGCATAATTATCTGGAGATTTCCGCTATTCATAATGAAGAAGGTTATCGGGAGATCCGTAACCGGTTATCGTCGCAATATAACTTAAGTAATCTGGAGCCGAATATTCAGATCTGGAACGTGGATTTGCGCGGCGACCGTTCGCTGACGCTGCGTTATATTCCACATAATCGCGCACCGCTGGATCGGGGGCGCAAAGAAGTCCTGAAGCATGTGCATCGCCTGTGGGGATTTGATGTGATGCTCGAACAGCAAAACGAAGACGGCAGCATCGAGTTGCTGGAACGTTGCCCGCCAAGAATGGGAAATCTGTAA", + "dna_sequence_length": 1533, + "functions": [ + "SpoVR family stationary phase protein" + ], + "id": "CDS_1169", + "location": [ + [ + "NC_000913", + 1237241, + "-", + 1533 + ] + ], + "md5": "a70c9e72c03942923f61de032493311f", + "parent_gene": "", + "protein_md5": "ae5b826c1faba4566de05bf2241c2304", + "protein_translation": "MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSIELLERCPPRMGNL", + "protein_translation_length": 510, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003995" + ], + [ + "gene_synonym", + "ECK1177" + ], + [ + "gene_synonym", + "EcoGene:EG11407" + ], + [ + "gene_synonym", + "GI:16129152" + ], + [ + "gene_synonym", + "GeneID:945752" + ], + [ + "gene_synonym", + "JW1178" + ], + [ + "gene_synonym", + "NP_415707.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6J5" + ], + [ + "gene_synonym", + "b1189" + ], + [ + "gene_synonym", + "dadA" + ], + [ + "gene_synonym", + "dadR" + ] + ], + "dna_sequence": "ATGCGAGTTGTCATACTGGGAAGTGGTGTGGTAGGCGTTGCCAGCGCCTGGTACTTAAATCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCGCCCTGGAAACCAGTGCCGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCGATTAAATGGATGTTCCAGCGCCATGCGCCGCTGGCGGTTCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTGGAGCCCGCGCTGGCAGAAGTGGCGCACAAACTGACGGGCGGCCTGCAGTTACCCAATGATGAAACCGGAGACTGTCAGCTATTTACCCAGAATCTGGCGCGGATGGCGGAGCAGGCGGGGGTTAAATTCCGCTTTAATACGCCCGTTGACCAACTGCTTTGCGACGGCGAGCAAATCTACGGCGTGAAGTGTGGCGATGAAGTGATTAAGGCCGATGCGTATGTGATGGCGTTTGGTTCTTACTCGACGGCGATGCTCAAAGGCATTGTTGATATTCCGGTGTATCCGCTGAAAGGCTACTCGCTGACCATTCCAATTGCGCAGGAAGATGGTGCGCCGGTATCCACCATTCTTGATGAAACCTACAAAATCGCCATTACCCGTTTCGATAACCGCATTCGTGTTGGCGGAATGGCGGAGATTGTTGGTTTTAATACCGAGCTGTTGCAACCGCGTCGTGAAACGCTGGAGATGGTGGTTCGCGATCTCTATCCACGCGGCGGTCATGTCGAGCAGGCGACTTTCTGGACTGGTCTGCGCCCGATGACGCCAGACGGCACGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAA", + "dna_sequence_length": 1299, + "functions": [ + "D-amino acid dehydrogenase" + ], + "id": "CDS_1170", + "location": [ + [ + "NC_000913", + 1237571, + "+", + 1299 + ] + ], + "md5": "b98f160738f6f983c02c02eca9455caa", + "parent_gene": "", + "protein_md5": "520656e2a724f46b72d4c4e377c0a1d1", + "protein_translation": "MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003997" + ], + [ + "gene_synonym", + "ECK1178" + ], + [ + "gene_synonym", + "EcoGene:EG11408" + ], + [ + "gene_synonym", + "GI:16129153" + ], + [ + "gene_synonym", + "GeneID:945754" + ], + [ + "gene_synonym", + "JW1179" + ], + [ + "gene_synonym", + "NP_415708.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29012" + ], + [ + "gene_synonym", + "alnB" + ], + [ + "gene_synonym", + "b1190" + ], + [ + "gene_synonym", + "dadB" + ], + [ + "gene_synonym", + "dadX" + ], + [ + "gene_synonym", + "msuA?" + ] + ], + "dna_sequence": "ATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGCGTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCGCTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTACGTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATTGGTACGCCGGTTGAGCTGTGGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCTGCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAA", + "dna_sequence_length": 1071, + "functions": [ + "alanine racemase, catabolic, PLP-binding" + ], + "id": "CDS_1171", + "location": [ + [ + "NC_000913", + 1238879, + "+", + 1071 + ] + ], + "md5": "99feb30dc1f6a85b07ff61557b6f249c", + "parent_gene": "", + "protein_md5": "60ada618773dd222501819dd61cddfc7", + "protein_translation": "MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAIGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003999" + ], + [ + "gene_synonym", + "ECK1179" + ], + [ + "gene_synonym", + "EcoGene:EG13896" + ], + [ + "gene_synonym", + "GI:90111230" + ], + [ + "gene_synonym", + "GeneID:945755" + ], + [ + "gene_synonym", + "JW5184" + ], + [ + "gene_synonym", + "NP_415709.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76007" + ], + [ + "gene_synonym", + "b1191" + ], + [ + "gene_synonym", + "cvrA" + ], + [ + "gene_synonym", + "ycgO" + ] + ], + "dna_sequence": "TTGGATGCCACAACAATAATTAGCCTTTTCATCTTAGGATCCATCCTTGTCACCAGCAGTATATTACTTAGTTCATTTTCTTCCCGTCTTGGCATTCCTATTCTGGTTATTTTTCTGGCGATCGGCATGCTGGCAGGAGTCGATGGCGTCGGCGGTATCCCGTTTGATAATTACCCCTTCGCCTACATGGTAAGTAACCTGGCACTGGCGATTATTTTGCTCGACGGCGGGATGCGCACTCAGGCCAGTTCCTTTCGTGTGGCGTTAGGACCGGCACTGTCGCTGGCGACGCTGGGCGTGCTTATCACCTCTGGTTTAACCGGCATGATGGCGGCGTGGCTGTTTAATCTTGATTTGATTGAAGGCTTATTAATCGGCGCTATCGTCGGCTCTACCGATGCTGCAGCGGTCTTTTCTCTGCTGGGTGGTAAGGGGCTTAACGAACGTGTTGGCTCGACGCTGGAAATTGAATCCGGCAGTAATGATCCAATGGCGGTCTTTCTGACGATTACCCTAATTGCGATGATCCAGCATCATGAGAGCAATATTAGCTGGATGTTCATTGTCGATATTCTGCAACAATTTGGTCTGGGCATTGTAATAGGTCTTGGCGGCGGTTATTTACTACTGCAAATGATCAACCGCATCGCCCTGCCCGCCGGATTATATCCATTGCTGGCATTAAGTGGCGGTATTCTGATTTTCTCATTAACTACTGCGCTGGAAGGTAGCGGTATTCTGGCGGTGTATCTGTGCGGTTTTCTGCTGGGTAATCGCCCTATTCGCAACCGCTACGGCATCCTGCAAAATTTCGACGGCCTCGCCTGGCTGGCGCAAATCGCCATGTTCCTGGTGCTGGGGCTGTTGGTTAACCCAAGCGATCTGCTGCCTATTGCCATTCCGGCGCTCATTTTGTCCGCATGGATGATATTCTTCGCCCGTCCCCTTTCGGTATTTGCTGGATTGCTCCCCTTCCGCGGTTTCAATCTGCGTGAGCGCGTGTTTATCAGCTGGGTAGGATTACGCGGCGCGGTGCCAATCATCCTGGCCGTGTTCCCGATGATGGCGGGGCTGGAGAATGCACGTCTGTTCTTTAATGTCGCCTTCTTTGTGGTTCTGGTTTCACTGCTCTTGCAGGGAACATCACTCTCGTGGGCGGCTAAAAAAGCCAAAGTGGTGGTTCCGCCAGTGGGACGTCCGGTGTCACGCGTTGGCCTGGATATTCATCCGGAAAATCCGTGGGAGCAGTTTGTTTATCAATTGAGTGCCGATAAATGGTGCGTGGGCGCGGCACTGCGCGATTTGCATATGCCAAAAGAGACGCGTATTGCGGCACTGTTTCGTGATAACCAGTTGCTTCATCCTACCGGCAGCACCCGACTGCGCGAAGGCGATGTGTTGTGTGTAATTGGTCGGGAACGCGATCTTCCGGCGCTCGGTAAACTGTTCAGCCAGTCGCCGCCGGTCGCGCTGGATCAACGCTTCTTTGGTGACTTCATTCTCGAAGCCAGCGCCAAATATGCTGATGTTGCGCTGATATATGGCCTGGAAGACGGGCGAGAATATCGTGATAAGCAGCAAACGCTGGGTGAAATTGTCCAGCAGTTGTTAGGCGCGGCACCGGTTGTCGGTGACCAGGTAGAGTTTGCCGGGATGATCTGGACGGTGGCCGAGAAAGAAGATAATGAAGTGTTGAAGATTGGCGTACGGGTGGCTGAAGAGGAAGCTGAATCTTAA", + "dna_sequence_length": 1737, + "functions": [ + "putative cation/proton antiporter" + ], + "id": "CDS_1172", + "location": [ + [ + "NC_000913", + 1242071, + "-", + 1737 + ] + ], + "md5": "651308e4d7445310c50dce9fe66c5d1c", + "parent_gene": "", + "protein_md5": "00022ccf4f592481b9b6b360503916ec", + "protein_translation": "MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISWMFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES", + "protein_translation_length": 578, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004002" + ], + [ + "gene_synonym", + "ECK1180" + ], + [ + "gene_synonym", + "EcoGene:EG13898" + ], + [ + "gene_synonym", + "GI:16129155" + ], + [ + "gene_synonym", + "GeneID:945756" + ], + [ + "gene_synonym", + "JW1181" + ], + [ + "gene_synonym", + "NP_415710.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76008" + ], + [ + "gene_synonym", + "b1192" + ], + [ + "gene_synonym", + "ldcA" + ], + [ + "gene_synonym", + "ycgQ" + ] + ], + "dna_sequence": "ATGTCTCTGTTTCACTTAATTGCCCCATCGGGTTACTGCATTAAACAGCACGCCGCGCTGCGTGGTATCCAGCGCCTTACCGACGCGGGGCATCAAGTCAATAACGTCGAGGTTATTGCCCGTCGTTGTGAGCGTTTTGCGGGTACGGAAACAGAGCGTCTGGAAGATCTCAATTCCCTTGCCAGACTGACTACCCCCAACACCATCGTGCTGGCTGTACGCGGCGGTTACGGTGCCAGTCGTTTACTGGCAGATATTGACTGGCAGGCACTGGTGGCTCGCCAACAACATGACCCGTTGCTCATTTGCGGACATAGCGATTTTACCGCCATTCAGTGCGGTCTTCTGGCGCATGGCAATGTCATCACCTTTAGCGGCCCCATGCTGGTAGCAAACTTTGGCGCGGATGAACTGAACGCCTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCGAAGGCACGTTGTGGGGAGGCAATCTTGCGATGCTGATTTCACTGATCGGTACACCGTGGATGCCAAAAATTGAGAACGGTATTCTGGTGCTGGAAGATATTAACGAGCACCCTTTCCGGGTCGAACGTATGCTGTTGCAGCTCTATCATGCGGGAATTTTGCCACGTCAGAAGGCGATTATTCTCGGTAGCTTTAGCGGCAGCACGCCCAATGATTATGACGCAGGTTACAACCTGGAGTCAGTGTACGCGTTTTTGCGTTCCCGCCTGTCGATTCCACTCATTACCGGCCTCGATTTTGGTCATGAACAACGCACGGTTACGCTGCCGTTGGGCGCACATGCCATTCTGAATAACACCCGGGAAGGCACTCAGTTGACGATTAGCGGTCATCCTGTTCTTAAAATGTAA", + "dna_sequence_length": 915, + "functions": [ + "murein tetrapeptide carboxypeptidase", + "LD-carboxypeptidase A" + ], + "id": "CDS_1173", + "location": [ + [ + "NC_000913", + 1243080, + "-", + 915 + ] + ], + "md5": "9c65c2c850d5bebc08046c07cf11faab", + "parent_gene": "", + "protein_md5": "a9a7d65ac76c76eca701a94c40bf1a04", + "protein_translation": "MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004006" + ], + [ + "gene_synonym", + "ECK1181" + ], + [ + "gene_synonym", + "EcoGene:EG13897" + ], + [ + "gene_synonym", + "GI:90111231" + ], + [ + "gene_synonym", + "GeneID:945655" + ], + [ + "gene_synonym", + "JW5821" + ], + [ + "gene_synonym", + "NP_415711.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C960" + ], + [ + "gene_synonym", + "b1193" + ], + [ + "gene_synonym", + "emtA" + ], + [ + "gene_synonym", + "mltE" + ], + [ + "gene_synonym", + "sltZ" + ], + [ + "gene_synonym", + "ycgP" + ] + ], + "dna_sequence": "GTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGCGTCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAA", + "dna_sequence_length": 612, + "functions": [ + "lytic murein endotransglycosylase E" + ], + "id": "CDS_1174", + "location": [ + [ + "NC_000913", + 1243180, + "+", + 612 + ] + ], + "md5": "311e34a92f8e6234d092010a4c61a98b", + "parent_gene": "", + "protein_md5": "889132211d26295415f52e15bd7590c8", + "protein_translation": "MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004009" + ], + [ + "gene_synonym", + "ECK1182" + ], + [ + "gene_synonym", + "EcoGene:EG13899" + ], + [ + "gene_synonym", + "GI:16129157" + ], + [ + "gene_synonym", + "GeneID:947609" + ], + [ + "gene_synonym", + "JW1183" + ], + [ + "gene_synonym", + "NP_415712.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76010" + ], + [ + "gene_synonym", + "b1194" + ], + [ + "gene_synonym", + "ycgR" + ] + ], + "dna_sequence": "GTGAGTCATTACCATGAGCAGTTCCTGAAACAAAATCCGTTAGCCGTCCTGGGCGTGTTACGCGATTTGCACAAAGCCGCAATTCCTTTGCGTCTCAGTTGGAATGGCGGGCAGCTGATCAGCAAATTACTGGCAATAACCCCGGATAAACTGGTGCTGGATTTCGGCAGTCAAGCCGAAGACAACATCGCCGTGCTAAAGGCACAGCACATTACCATTACCGCCGAAACTCAGGGTGCGAAAGTCGAGTTTACTGTTGAACAACTACAGCAGAGTGAATACTTGCAGCTTCCGGCATTTATTACCGTACCGCCTCCCACCTTATGGTTTGTACAACGACGCCGATATTTCCGCATCTCCGCCCCACTCCATCCGCCTTATTTTTGCCAGACCAAACTGGCGGATAACAGTACGTTACGTTTCCGCCTGTATGATTTGTCGTTAGGCGGCATGGGCGCATTACTGGAAACAGCAAAGCCTGCCGAATTACAAGAAGGCATGCGCTTCGCTCAGATTGAAGTCAACATGGGGCAATGGGGTGTTTTTCACTTTGACGCCCAGTTAATCTCCATCAGCGAGCGCAAAGTGATTGATGGCAAGAATGAAACCATCACCACTCCCCGTCTGAGCTTCCGTTTTCTTAACGTCAGCCCGACGGTGGAGCGGCAATTACAGCGGATTATTTTCTCTCTCGAGCGAGAAGCCCGGGAAAAAGCGGACAAAGTGCGCGACTGA", + "dna_sequence_length": 735, + "functions": [ + "flagellar velocity braking protein, c-di-GMP-regulated" + ], + "id": "CDS_1175", + "location": [ + [ + "NC_000913", + 1244527, + "-", + 735 + ] + ], + "md5": "7be0ba1274c074b635601124f242fd9e", + "parent_gene": "", + "protein_md5": "e1e6d8d5f2ff5784fdd781f273b9662f", + "protein_translation": "MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKLLAITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFITVPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKPAELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSPTVERQLQRIIFSLEREAREKADKVRD", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004014" + ], + [ + "gene_synonym", + "ECK1183" + ], + [ + "gene_synonym", + "EcoGene:EG14338" + ], + [ + "gene_synonym", + "GI:16129158" + ], + [ + "gene_synonym", + "GeneID:945760" + ], + [ + "gene_synonym", + "JW1184" + ], + [ + "gene_synonym", + "NP_415713.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76011" + ], + [ + "gene_synonym", + "b1195" + ], + [ + "gene_synonym", + "tag" + ], + [ + "gene_synonym", + "ymgE" + ] + ], + "dna_sequence": "ATGGGAATTATTGCCTGGATTATTTTTGACCTGATAGCCGGCATTATCGCCAAGCTAATCATGCCGGGGCGTGATGGTGGTGGATTTTTCCTGACCTGTATTCTCGGGATAGTCGGTGCGGTGGTCGGCGGCTGGCTGGCGACCATGTTTGGCATTGGCGGCTCCATCAGTGGTTTTAATCTGCACAGCTTCCTGGTGGCGGTGGTGGGAGCTATTCTCGTTCTGGGCATATTCCGCCTCCTGCGAAGAGAATAA", + "dna_sequence_length": 255, + "functions": [ + "UPF0410 family putative inner membrane protein" + ], + "id": "CDS_1176", + "location": [ + [ + "NC_000913", + 1244728, + "+", + 255 + ] + ], + "md5": "23198de88afc863cb03f0dc6c170006c", + "parent_gene": "", + "protein_md5": "baa8b47e694a5018f0ec81cde9229747", + "protein_translation": "MGIIAWIIFDLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFNLHSFLVAVVGAILVLGIFRLLRRE", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004019" + ], + [ + "gene_synonym", + "ECK1184" + ], + [ + "gene_synonym", + "EcoGene:EG14275" + ], + [ + "gene_synonym", + "GI:16129159" + ], + [ + "gene_synonym", + "GeneID:945761" + ], + [ + "gene_synonym", + "JW1185" + ], + [ + "gene_synonym", + "NP_415714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76012" + ], + [ + "gene_synonym", + "b1196" + ], + [ + "gene_synonym", + "ycgY" + ] + ], + "dna_sequence": "GTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCCGTTCGGCAATGCTTCAGTTACGCGAAGAGGAATGGTCTGAATTCTTTTTTTGGTTGCTAAATTCTCTGGAGTGTCTGGATTATGTGATTATTAATTTAACTCCAGAAAGCAAAAAAACGTTGATGAGTGAACACCGTAACAATATTCAGGTAGCAATTGATGCTTTATATAGCCAACGTCGGCGTAAATCGCCGGGTGATGAAAGTGAAACACTTACCCGTAGAAATGACGCTATCTTCGGCAACCACGTATGGCAAACATTTGCGCAATACTTCCCGCCAGGACTTGAAAAACCGTCTGTGTAG", + "dna_sequence_length": 441, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1177", + "location": [ + [ + "NC_000913", + 1245160, + "+", + 441 + ] + ], + "md5": "338f18b610bb359a37f57ff428743a07", + "parent_gene": "", + "protein_md5": "1a7b95cc54c14563386ef591bdbf4c02", + "protein_translation": "MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQNTRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALYSQRRRKSPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004021" + ], + [ + "gene_synonym", + "ECK1185" + ], + [ + "gene_synonym", + "EcoGene:EG11017" + ], + [ + "gene_synonym", + "GI:16129160" + ], + [ + "gene_synonym", + "GeneID:945757" + ], + [ + "gene_synonym", + "JW1186" + ], + [ + "gene_synonym", + "NP_415715.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13482" + ], + [ + "gene_synonym", + "b1197" + ], + [ + "gene_synonym", + "osmA" + ], + [ + "gene_synonym", + "treA" + ] + ], + "dna_sequence": "ATGAAATCCCCCGCACCTTCTCGCCCGCAAAAAATGGCGTTAATTCCAGCCTGTATCTTTTTGTGTTTCGCTGCGCTATCGGTGCAGGCAGAAGAAACACCGGTAACACCACAGCCGCCTGATATTTTATTAGGGCCGCTGTTTAATGATGTGCAAAACGCCAAACTTTTTCCGGACCAAAAAACCTTTGCCGATGCCGTGCCGAACAGCGATCCGCTGATGATCCTTGCTGATTATCGGATGCAGCAAAACCAGAGCGGATTTGATCTGCGCCATTTCGTTAACGTCAATTTCACCCTGCCGAAAGAAGGCGAGAAATATGTTCCGCCAGAGGGGCAGTCACTGCGCGAACATATTGACGGACTTTGGCCGGTATTAACGCGTTCTACCGAAAACACCGAAAAATGGGATTCTCTGTTACCGCTGCCGGAACCTTATGTCGTGCCGGGCGGACGCTTTCGCGAGGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCGGATATGGTGGCCAATTTTGCTCATGAAATAGACACTTACGGTCATATTCCCAACGGCAACCGCAGTTACTATTTAAGCCGCTCGCAACCGCCCTTCTTTGCCCTGATGGTAGAGTTACTGGCGCAGCATGAAGGCGATGCCGCGTTGAAGCAATACCTGCCGCAAATGCAAAAAGAATATGCTTACTGGATGGACGGTGTTGAAAACCTGCAAGCCGGACAACAGGAAAAACGCGTTGTCAAACTTCAGGATGGTACCCTTCTCAACCGCTACTGGGACGATCGCGATACGCCACGACCAGAGTCATGGGTGGAAGATATTGCCACCGCCAAAAGCAATCCGAATCGACCTGCCACTGAAATTTACCGCGACCTGCGCTCTGCCGCTGCGTCTGGCTGGGATTTCAGCTCGCGCTGGATGGACAACCCGCAGCAGTTAAATACCTTACGCACCACCAGCATCGTACCGGTCGATCTGAACAGCCTGATGTTTAAAATGGAAAAAATCCTCGCCCGCGCCAGCAAAGCTGCCGGAGATAACGCGATGGCAAACCAGTACGAAACGCTGGCAAATGCCCGTCAAAAAGGGATCGAAAAATACCTGTGGAACGATCAACAAGGCTGGTATGCCGATTACGACCTGAAAAGTCATAAAGTGCGCAATCAGTTAACCGCGGCCGCCCTGTTCCCGCTGTACGTCAATGCGGCAGCGAAAGATCGCGCCAACAAAATGGCGACGGCGACGAAAACACATCTGCTGCAACCCGGCGGCCTGAACACCACGTCGGTGAAAAGTGGGCAACAATGGGATGCGCCAAATGGCTGGGCACCGTTACAGTGGGTCGCGACAGAAGGATTACAAAACTACGGGCAAAAAGAGGTGGCGATGGACATTAGCTGGCACTTCCTGACCAATGTTCAGCACACCTATGACCGGGAGAAAAAGCTGGTGGAAAAATATGATGTCAGCACCACCGGAACGGGGGGCGGCGGTGGCGAATATCCATTACAGGATGGCTTTGGCTGGACCAATGGCGTGACGCTGAAAATGCTGGATTTGATCTGCCCGAAAGAGCAACCGTGTGACAATGTTCCGGCGACGCGTCCGACCGTTAAGTCAGCAACGACGCAACCCTCAACCAAAGAGGCACAACCCACACCTTAA", + "dna_sequence_length": 1698, + "functions": [ + "periplasmic trehalase" + ], + "id": "CDS_1178", + "location": [ + [ + "NC_000913", + 1247376, + "-", + 1698 + ] + ], + "md5": "c5bfedbdbb2ed93f3a6380e6d8c899b3", + "parent_gene": "", + "protein_md5": "d4bc5910f71bdea9b94628450da93565", + "protein_translation": "MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPTP", + "protein_translation_length": 565, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004024" + ], + [ + "gene_synonym", + "ECK1186" + ], + [ + "gene_synonym", + "EcoGene:EG12399" + ], + [ + "gene_synonym", + "GI:226524708" + ], + [ + "gene_synonym", + "GeneID:945749" + ], + [ + "gene_synonym", + "JW5185" + ], + [ + "gene_synonym", + "NP_415716.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37349" + ], + [ + "gene_synonym", + "b1198" + ], + [ + "gene_synonym", + "dhaH" + ], + [ + "gene_synonym", + "dhaM" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgC" + ] + ], + "dna_sequence": "ATGGTAAACCTGGTCATAGTTTCACATAGCAGCCGACTGGGAGAAGGTGTCGGTGAATTAGCCCGTCAGATGTTAATGAGTGATAGTTGTAAAATCGCCATTGCCGCGGGAATTGACGATCCACAAAATCCCATTGGTACCGATGCCGTCAAAGTGATGGAGGCCATCGAATCTGTTGCTGATGCCGACCATGTGCTGGTCATGATGGATATGGGTAGCGCATTATTGAGTGCTGAAACTGCGCTGGAATTGCTGGCTCCCGAGATCGCCGCAAAAGTACGTTTGTGTGCTGCGCCGTTGGTCGAAGGTACACTGGCAGCAACGGTCAGCGCGGCCTCGGGGGCGGATATCGACAAAGTTATCTTTGACGCCATGCATGCGCTGGAAGCCAAACGTGAACAACTGGGTTTACCGTCCTCCGACACTGAAATCTCTGACACATGTCCTGCGTACGATGAAGAAGCCCGTTCTCTGGCGGTGGTCATAAAAAACCGTAACGGCCTGCATGTACGTCCGGCCTCCCGGCTGGTTTATACCTTATCGACATTTAATGCCGATATGTTGCTGGAAAAAAACGGCAAATGCGTCACACCAGAGAGTATTAACCAGATTGCGTTACTACAAGTTCGCTATAACGATACGCTGCGCCTGATTGCGAAAGGGCCAGAAGCTGAAGAGGCACTGATCGCTTTCCGTCAGCTGGCTGAAGATAACTTTGGTGAAACGGAGGAAGTCGCTCCACCTACTCTGCGTCCCGTTCCGCCTGTTTCGGGTAAAGCCTTTTATTATCAACCAGTTTTATGTACGGTACAGGCAAAATCAACCCTGACCGTGGAAGAAGAACAAGATCGATTACGCCAGGCTATTGACTTCACGTTATTAGATCTGATGACGTTAACAGCGAAAGCAGAAGCCAGCGGGCTTGACGATATTGCCGCAATCTTTTCTGGTCACCATACACTGTTAGATGATCCGGAACTGCTGGCGGCGGCAAGCGAACTCCTTCAGCATGAACATTGCACGGCAGAATATGCCTGGCAGCAAGTTCTTAAAGAACTTAGCCAGCAATACCAGCAACTGGATGATGAATATCTACAAGCTCGCTATATTGATGTGGACGATCTTCTGCATCGCACCCTGGTCCACCTGACCCAAACGAAAGAAGAACTCCCGCAGTTTAACTCGCCAACTATTCTACTGGCGGAGAACATTTATCCTTCCACAGTACTGCAACTGGATCCGGCGGTTGTAAAAGGTATCTGCCTTAGCGCCGGAAGTCCGGTATCCCACAGCGCCCTAATCGCCCGTGAACTGGGGATTGGCTGGATTTGCCAGCAGGGTGAGAAACTGTATGCGATACAACCAGAAGAAACGCTAACGCTGGACGTTAAAACGCAACGTTTCAACCGTCAGGGTTAA", + "dna_sequence_length": 1419, + "functions": [ + "putative dihydroxyacetone-specific PTS enzymes: HPr, EI components" + ], + "id": "CDS_1179", + "location": [ + [ + "NC_000913", + 1249114, + "-", + 1419 + ] + ], + "md5": "b9846ad8bee4c624668ea7eb2bdd9701", + "parent_gene": "", + "protein_md5": "5509eda48bbf12602080c90d3a56a279", + "protein_translation": "MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004026" + ], + [ + "gene_synonym", + "ECK1187" + ], + [ + "gene_synonym", + "EcoGene:EG13900" + ], + [ + "gene_synonym", + "GI:16129162" + ], + [ + "gene_synonym", + "GeneID:945748" + ], + [ + "gene_synonym", + "JW5186" + ], + [ + "gene_synonym", + "NP_415717.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76014" + ], + [ + "gene_synonym", + "b1199" + ], + [ + "gene_synonym", + "dhaK2" + ], + [ + "gene_synonym", + "dhaL" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgS" + ] + ], + "dna_sequence": "ATGTCACTGAGCAGAACTCAAATTGTTAACTGGCTCACTCGTTGTGGCGATATTTTCAGCACCGAGAGCGAGTATCTTACCGGACTGGATCGCGAAATTGGCGATGCTGACCACGGGCTAAATATGAACCGAGGCTTTAGCAAAGTGGTGGAAAAACTCCCTGCTATCGCAGATAAAGATATCGGTTTCATTCTCAAGAATACCGGTATGACGCTGCTTTCCAGCGTCGGTGGTGCCAGTGGTCCGCTGTTCGGTACCTTCTTTATCCGCGCCGCACAGGCGACCCAGGCACGGCAAAGCCTGACACTGGAAGAGCTTTATCAGATGTTCCGCGATGGCGCGGACGGCGTAATCAGTCGCGGGAAAGCCGAACCTGGCGATAAAACCATGTGTGATGTGTGGGTGCCGGTGGTGGAATCGTTACGTCAGTCCAGCGAGCAAAATCTCTCTGTTCCGGTGGCGCTCGAAGCTGCCAGTAGCATCGCCGAATCCGCTGCACAAAGTACGATTACGATGCAAGCCCGCAAAGGCCGCGCCAGTTATCTCGGTGAACGCAGTATTGGTCACCAGGATCCCGGCGCGACCTCGGTGATGTTTATGATGCAAATGTTGGCGTTAGCCGCAAAAGAGTAA", + "dna_sequence_length": 633, + "functions": [ + "dihydroxyacetone kinase, C-terminal domain" + ], + "id": "CDS_1180", + "location": [ + [ + "NC_000913", + 1249757, + "-", + 633 + ] + ], + "md5": "79a841d94a16d4db476beb3e4a823c36", + "parent_gene": "", + "protein_md5": "1448673b9a3465ab1c7d40e7786b0648", + "protein_translation": "MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004029" + ], + [ + "gene_synonym", + "ECK1188" + ], + [ + "gene_synonym", + "EcoGene:EG13901" + ], + [ + "gene_synonym", + "GI:162135900" + ], + [ + "gene_synonym", + "GeneID:945747" + ], + [ + "gene_synonym", + "JW5187" + ], + [ + "gene_synonym", + "NP_415718.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76015" + ], + [ + "gene_synonym", + "b1200" + ], + [ + "gene_synonym", + "dhaK" + ], + [ + "gene_synonym", + "dhaK1" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgT" + ] + ], + "dna_sequence": "ATGAAAAAATTGATCAATGATGTGCAAGACGTACTGGACGAACAACTGGCAGGACTGGCGAAAGCGCATCCATCGCTGACACTGCATCAGGATCCGGTGTATGTCACCCGAGCTGATGCCCCTGTTGCAGGAAAAGTCGCCCTGCTGTCGGGTGGCGGCAGCGGACACGAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCGCCATGCAAGTTGATGGCGGCGAAGGTGTACTGTTGATTATCAAAAATTACACCGGCGATATTCTTAACTTTGAAACAGCGACCGAGTTACTGCACGATAGCGGCGTAAAAGTGACCACTGTGGTCATTGATGACGACGTTGCGGTAAAAGACAGTCTTTATACTGCCGGGCGACGCGGCGTTGCCAACACCGTATTAATTGAAAAACTCGTAGGCGCAGCGGCGGAGCGTGGCGACTCACTGGACGCCTGTGCGGAACTGGGGCGTAAGCTGAATAATCAAGGCCACTCAATAGGTATCGCTCTCGGTGCCTGTACCGTTCCTGCCGCGGGCAAACCTTCTTTTACCCTGGCGGATAATGAGATGGAGTTTGGCGTCGGCATTCATGGTGAGCCGGGTATTGACCGCCGCCCCTTCTCTTCCCTTGATCAAACCGTCGATGAAATGTTCGACACCCTGCTGGTAAATGGCTCATACCATCGCACTTTGCGTTTCTGGGATTATCAACAAGGCAGTTGGCAGGAAGAACAACAAACCAAACAACCGCTCCAGTCTGGCGATCGGGTGATTGCGCTGGTTAACAATCTTGGCGCAACTCCGCTTTCTGAGCTGTACGGCGTCTATAACCGCCTGACCACACGTTGCCAGCAAGCGGGATTGACTATCGAACGTAATTTAATTGGCGCGTACTGCACCTCACTGGATATGACCGGTTTCTCAATCACCTTACTGAAAGTTGATGACGAAACGCTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTGGGGTAAATAA", + "dna_sequence_length": 1071, + "functions": [ + "dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit" + ], + "id": "CDS_1181", + "location": [ + [ + "NC_000913", + 1250838, + "-", + 1071 + ] + ], + "md5": "fa1c914c3e36e44aa562f1a9b6e0f8bd", + "parent_gene": "", + "protein_md5": "4231711d4aa58b4fb6793a29453a8390", + "protein_translation": "MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWGK", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004033" + ], + [ + "gene_synonym", + "ECK1189" + ], + [ + "gene_synonym", + "EcoGene:EG13902" + ], + [ + "gene_synonym", + "GI:90111234" + ], + [ + "gene_synonym", + "GeneID:945743" + ], + [ + "gene_synonym", + "JW5188" + ], + [ + "gene_synonym", + "NP_415719.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76016" + ], + [ + "gene_synonym", + "b1201" + ], + [ + "gene_synonym", + "dhaR" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgU" + ] + ], + "dna_sequence": "ATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGATGGCCGATCAACATTTCAAACAGGTACTCTGGAACTGGGCCTTTTGTGCAACGCCGTTGTTTGACAGCAAGGGCCGATTGACGGGAACAATAGCGCTGGCGTGTCCGGTTGAGCAAACTACCGCAGCTGATTTGCCGTTGACGTTGGCAATCGCCCGCGAGGTCGGAAATTTACTGCTGACGGACAGTTTGCTCGCTGAAACTAACCGTCATTTAAATCAACTTAATGCCCTGTTAGAAAGTATGGATGATGGCGTGATTAGCTGGGACGAGCAGGGTAATTTGCAATTTATTAATGCCCAGGCGGCGCGGGTCTTGCGCCTTGACGCGACGGCAAGTCAGGGACGGGCAATCACTGAACTCTTAACGTTACCCGCCGTATTGCAACAAGCAATAAAACAGGCACATCCGCTCAAACACGTAGAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGCGGTGATAACCCTTAAACCGATAATAGAAACGCAGGGAACCAGCTTTATTTTGTTGCTCCATCCTGTGGAACAGATGCGGCAGTTGATGACCAGTCAATTAGGAAAAGTCAGCCATACCTTCGCTCATATGCCACAGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTGCAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGAAAATGGCCGTCTGAGTCGGCTGGAACTGGCACACGGCGGCACGCTGTTTCTTGAAAAGATTGAATATCTGGCGGTGGAGTTACAGTCTGCTTTGCTTCAGGTTATCAAGCAGGGGGTTATCACGCGACTGGATGCGCGGCGTTTAATACCAATTGATGTCAAAGTGATTGCAACAACGACCGCGGACCTCGCAATGCTGGTGGAACAAAATCGTTTTAGTCGCCAGCTGTATTACGCGCTGCATGCATTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGGCGCTGGTGAATAACAAATTACGCAGTCTTGAAAAACGCTTCTCTACGCGGCTGAAAATTGATGACGATGCCCTCGCTCGCCTGGTTTCTTGTGCATGGCCAGGCAACGATTTTGAACTTTACAGCGTCATCGAGAATCTTGCTCTGAGTAGTGATAACGGGCGCATTCGCGTCAGTGATTTGCCGGAACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGA", + "dna_sequence_length": 1920, + "functions": [ + "dhaKLM operon transcription activator" + ], + "id": "CDS_1182", + "location": [ + [ + "NC_000913", + 1251066, + "+", + 1920 + ] + ], + "md5": "8b667ff19b92a1660fd19cadb1a3095d", + "parent_gene": "", + "protein_md5": "cf1e4942f42b178bdec6650fc8766203", + "protein_translation": "MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQVLWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV", + "protein_translation_length": 639, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004035" + ], + [ + "gene_synonym", + "ECK1190" + ], + [ + "gene_synonym", + "EcoGene:EG13903" + ], + [ + "gene_synonym", + "GI:16129165" + ], + [ + "gene_synonym", + "GeneID:945767" + ], + [ + "gene_synonym", + "JW1193" + ], + [ + "gene_synonym", + "NP_415720.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76017" + ], + [ + "gene_synonym", + "b1202" + ], + [ + "gene_synonym", + "ycgV" + ] + ], + "dna_sequence": "ATGGGCATCAAACAACACAATGGGAATACCAAAGCAGATCGTCTCGCTGAATTAAAAATCCGTTCGCCCTCAATTCAACTGATAAAATTTGGCGCTATTGGTTTGAATGCAATTATCTTTTCCCCCCTGCTGATAGCTGCTGATACAGGAAGTCAATATGGCACCAATATTACTATTAATGATGGTGACAGAATTACAGGAGATACCGCCGATCCATCAGGAAACCTCTATGGTGTAATGACCCCAGCAGGAAACACGCCTGGCAATATCAACCTGGGTAATGATGTCACCGTCAATGTCAACGACGCCTCTGGATATGCAAAAGGAATCATTATTCAGGGCAAAAACAGCTCCCTGACAGCTAACCGACTCACAGTAGATGTTGTTGGTCAAACCTCTGCCATCGGCATTAACTTAATTGGTGACTATACCCATGCTGACTTAGGCACAGGCAGCACCATTAAGAGTAACGATGACGGCATCATTATTGGGCATAGCTCAACACTAACAGCCACTCAATTCACCATTGAAAACTCGAACGGTATAGGCCTAACCATCAATGACTATGGCACCAGTGTCGATCTTGGAAGCGGAAGTAAAATCACGACCGATGGAAGTACAGGTGTTTATATCGGTGGTCTCAACGGCAATAACGCCAATGGTGCTGCGCGTTTTACGGCTACAGACCTGACAATCGATGTTCAGGGCTACAGCGCCATGGGGATAAACGTACAGAAAAACTCTGTTGTCGATCTCGGAACAAACAGTACCATTAAAACCAATGGCGATAATGCTCACGGCCTCTGGAGCTTTGGCCAGGTTAGCGCGAATGCACTCACTGTTGATGTAACTGGAGCCGCGGCCAATGGCGTCGAAGTTCGTGGTGGTACAACCACTATCGGTGCAGATAGCCATATTTCTTCCGCGCAGGGCGGTGGCCTCGTCACCAGTGGTTCAGACGCGATAATCAATTTTACTGGCACGGCAGCGCAACGAAACAGCATCTTTTCCGGCGGTTCTTATGGTGCCTCGGCCCAGACGGCAACGGCTGTTGTCAACATGCAAAATACCGATATTACAGTTGATCGTAATGGCAGTCTGGCGCTGGGTTTGTGGGCTCTCAGCGGCGGTAGAATAACCGGAGACAGTTTGGCTATCACCGGCGCGGCAGGAGCCAGGGGAATTTATGCCATGACCAACAGCCAGATCGACCTCACGAGCGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAATCAATCTGGATATGCACCCTGGGTCGGTTTGGACAGGTTCCTCCCTCAGCGATAATGTCAATGGCGGAAAACTGGACGTTGCAATGAATAACAGCGTCTGGAACGTAACAAGTAATTCTAATCTCGACACGCTGGCGCTGAGCCATTCAACTGTCGATTTTGCCAGCCACGGGTCAACTGCCGGCACATTTGCCACATTAAACGTAGAGAACCTGAGCGGTAACAGTACCTTTATTATGCGTGCTGATGTTGTTGGCGAGGGTAATGGCGTTAATAATAAAGGGGATTTATTGAATATCAGCGGGAGTAGTGCTGGTAATCACGTATTGGCTATCCGCAACCAGGGCAGCGAGGCCACAACGGGAAATGAAGTTCTGACAGTGGTAAAAACCACTGACGGCGCGGCCTCGTTCAGCGCGTCTTCTCAGGTTGAGTTGGGGGGATATCTGTACGATGTGCGTAAAAATGGCACTAACTGGGAGCTTTACGCTTCCGGGACAGTTCCGGAACCGACTCCTAATCCTGAACCCACACCAGCTCCCGCTCAGCCTCCCATAGTCAACCCCGATCCTACGCCTGAACCCGCTCCCACGCCTAAACCCACCACGACCGCAGATGCTGGCGGCAATTATCTCAATGTCGGTTACTTATTGAACTATGTTGAAAACCGTACGCTGATGCAACGGATGGGTGACCTGCGAAATCAGAGTAAAGACGGTAATATCTGGTTGCGCAGTTATGGGGGAAGCCTGGACTCCTTTGCCAGTGGCAAACTGAGCGGCTTTGACATGGGTTACAGCGGTATCCAGTTTGGTGGGGATAAACGTCTCTCTGATGTAATGCCGTTGTATGTCGGTCTGTATATTGGCTCAACACATGCATCGCCGGACTATAGCGGAGGCGACGGTACCGCACGTTCAGACTACATGGGAATGTACGCCAGTTACATGGCACAAAACGGTTTTTACAGCGATCTCGTTATAAAAGCATCGCGCCAGAAAAATAGTTTCCACGTACTGGACAGTCAGAACAACGGCGTTAACGCCAACGGCACTGCGAATGGAATGAGCATCTCCCTGGAAGCCGGGCAGAGGTTCAACCTGTCCCCTACTGGTTATGGGTTCTATATAGAGCCGCAAACCCAGCTTACATACAGCCACCAGAATGAGATGACTATGAAGGCGAGTAATGGCCTCAATATACATCTGAATCACTACGAATCGCTGCTGGGGCGTGCCAGCATGATACTGGGGTATGACATCACCGCAGGCAACAGCCAGCTGAATGTCTATGTGAAGACTGGCGCTATCCGCGAGTTTTCAGGGGATACCGAATATCTGTTGAACAACTCCCGGGAGAAGTACAGTTTCAAAGGTAATGGCTGGAATAACGGCGTGGGAGTCAGTGCACAGTATAACAAACAGCACACATTCTATCTCGAAGCGGATTACACGCAGGGTAACCTCTTTGATCAGAAGCAAGTCAACGGAGGATATCGCTTCAGCTTTTAA", + "dna_sequence_length": 2868, + "functions": [ + "putative adhesin" + ], + "id": "CDS_1183", + "location": [ + [ + "NC_000913", + 1255952, + "-", + 2868 + ] + ], + "md5": "b76b7f739290f8ab9e66e807726cb627", + "parent_gene": "", + "protein_md5": "7c8ca88fee54e0e11ac2cc2784219ff2", + "protein_translation": "MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDAIINFTGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVIKASRQKNSFHVLDSQNNGVNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMTMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF", + "protein_translation_length": 955, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004038" + ], + [ + "gene_synonym", + "ECK1191" + ], + [ + "gene_synonym", + "EcoGene:EG11404" + ], + [ + "gene_synonym", + "GI:16129166" + ], + [ + "gene_synonym", + "GeneID:945769" + ], + [ + "gene_synonym", + "JW1194" + ], + [ + "gene_synonym", + "NP_415721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU2" + ], + [ + "gene_synonym", + "b1203" + ], + [ + "gene_synonym", + "engD" + ], + [ + "gene_synonym", + "gtp1" + ], + [ + "gene_synonym", + "ychF" + ] + ], + "dna_sequence": "ATGGGATTCAAATGCGGTATCGTCGGTTTGCCCAACGTCGGGAAATCTACCCTGTTCAACGCGCTGACCAAAGCCGGTATTGAAGCGGCCAACTTTCCATTCTGCACCATTGAGCCGAACACAGGCGTCGTACCAATGCCTGATCCTCGCCTGGATCAACTGGCTGAAATCGTAAAACCGCAGCGTACGCTTCCCACGACCATGGAATTTGTCGATATCGCCGGTCTGGTAAAAGGCGCATCGAAAGGCGAAGGTCTGGGTAACCAGTTCCTGACCAACATCCGTGAAACCGAAGCGATCGGTCACGTTGTTCGCTGCTTTGAAAATGACAACATCATTCACGTTTCCGGCAAAGTTAACCCGGCTGACGATATTGAAGTTATCAACACCGAACTGGCGCTGGCAGACCTCGACACCTGCGAACGTGCGATTCATCGCGTACAGAAGAAAGCCAAAGGTGGCGATAAAGACGCGAAAGCTGAGCTGGCGGTCCTGGAAAAATGCCTGCCCCAGTTGGAAAATGCAGGTATGCTGCGCGCGCTGGATTTAAGCGCTGAAGAGAAAGCGGCTATTCGTTACCTGAGCTTCCTGACGCTGAAACCAACAATGTACATCGCCAACGTCAACGAAGACGGTTTTGAAAACAACCCATATCTTGACCAGGTGCGTGAAATCGCGGCGAAAGAAGGTTCTGTTGTGGTTCCGGTTTGTGCTGCTGTTGAAGCAGACATTGCCGAACTGGACGACGAAGAACGTGACGAGTTTATGCAGGAGCTTGGGCTGGAAGAGCCGGGCCTGAACCGTGTGATCCGTGCCGGTTATAAACTGCTGAACCTGCAAACTTACTTCACCGCTGGGGTGAAAGAAGTGCGTGCATGGACCATTCCGGTTGGAGCAACCGCGCCGCAGGCAGCGGGCAAAATCCATACTGATTTTGAAAAAGGCTTTATCCGTGCACAAACCATCTCGTTTGAAGATTTCATCACTTACAAAGGTGAACAAGGCGCGAAAGAAGCAGGCAAAATGCGTGCAGAAGGTAAAGATTACATCGTGAAAGATGGCGATGTGATGAACTTCCTTTTCAACGTCTAA", + "dna_sequence_length": 1092, + "functions": [ + "catalase inhibitor protein", + "ATPase, K+-dependent, ribosome-associated" + ], + "id": "CDS_1184", + "location": [ + [ + "NC_000913", + 1257812, + "-", + 1092 + ] + ], + "md5": "0761f36e96c74c90819b20ab3251765f", + "parent_gene": "", + "protein_md5": "9339111df5a57673af88135502921e3c", + "protein_translation": "MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFLFNV", + "protein_translation_length": 363, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004043" + ], + [ + "gene_synonym", + "ECK1192" + ], + [ + "gene_synonym", + "EcoGene:EG10785" + ], + [ + "gene_synonym", + "GI:16129167" + ], + [ + "gene_synonym", + "GeneID:945765" + ], + [ + "gene_synonym", + "JW1195" + ], + [ + "gene_synonym", + "NP_415722.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7D1" + ], + [ + "gene_synonym", + "asuA?" + ], + [ + "gene_synonym", + "b1204" + ], + [ + "gene_synonym", + "pth" + ], + [ + "gene_synonym", + "rap" + ] + ], + "dna_sequence": "GTGACGATTAAATTGATTGTCGGCCTGGCGAACCCCGGTGCTGAATACGCCGCAACGCGACATAATGCTGGTGCCTGGTTCGTTGACTTACTGGCAGAGCGTTTGCGCGCTCCGCTGCGCGAAGAGGCTAAATTCTTTGGTTATACTTCGCGAGTCACTCTTGGAGGCGAAGATGTCCGCCTGTTAGTCCCGACTACATTTATGAATCTCAGCGGCAAAGCCGTTGCGGCGATGGCCAGTTTTTTCCGCATTAATCCGGACGAAATTCTGGTGGCCCACGACGAACTGGATCTGCCTCCTGGCGTCGCCAAATTTAAATTGGGCGGTGGCCATGGTGGTCACAATGGACTGAAAGACATCATCAGTAAATTGGGTAATAACCCTAACTTTCACCGTTTACGCATCGGAATCGGTCATCCGGGCGATAAAAATAAAGTTGTCGGTTTTGTGTTAGGCAAACCGCCTGTTAGTGAACAGAAGTTAATTGATGAAGCCATTGACGAAGCGGCGCGTTGTACTGAAATGTGGTTTACAGATGGCTTGACCAAAGCAACGAACCGATTGCACGCCTTTAAAGCGCAATAA", + "dna_sequence_length": 585, + "functions": [ + "peptidyl-tRNA hydrolase" + ], + "id": "CDS_1185", + "location": [ + [ + "NC_000913", + 1258513, + "-", + 585 + ] + ], + "md5": "f125cd44c2b265e8a6f84b8e59ce19fa", + "parent_gene": "", + "protein_md5": "eba443ca69331a4b5ece478681d63b3a", + "protein_translation": "MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004049" + ], + [ + "gene_synonym", + "ECK1193" + ], + [ + "gene_synonym", + "EcoGene:EG11533" + ], + [ + "gene_synonym", + "GI:16129168" + ], + [ + "gene_synonym", + "GeneID:945762" + ], + [ + "gene_synonym", + "JW1196" + ], + [ + "gene_synonym", + "NP_415723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB49" + ], + [ + "gene_synonym", + "b1205" + ], + [ + "gene_synonym", + "ychH" + ] + ], + "dna_sequence": "ATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGCGGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGACAAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAA", + "dna_sequence_length": 279, + "functions": [ + "DUF2583 family putative inner membrane protein" + ], + "id": "CDS_1186", + "location": [ + [ + "NC_000913", + 1258791, + "+", + 279 + ] + ], + "md5": "3b07ea92c91f34cb6c051bb3213369dd", + "parent_gene": "", + "protein_md5": "6a0f28f7a21cfc27f20df0b8b89ec6ec", + "protein_translation": "MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004051" + ], + [ + "gene_synonym", + "ECK1194" + ], + [ + "gene_synonym", + "EcoGene:EG12392" + ], + [ + "gene_synonym", + "GI:90111235" + ], + [ + "gene_synonym", + "GeneID:945770" + ], + [ + "gene_synonym", + "JW5189" + ], + [ + "gene_synonym", + "NP_415724.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR2" + ], + [ + "gene_synonym", + "b1206" + ], + [ + "gene_synonym", + "dauA" + ], + [ + "gene_synonym", + "ychM" + ] + ], + "dna_sequence": "GTGAACAAAATATTTTCCTCACATGTGATGCCTTTCCGCGCTCTGATCGACGCTTGCTGGAAAGAAAAATATACTGCCGCACGGTTTACCCGTGACCTGATTGCCGGGATAACCGTCGGGATTATTGCTATCCCGCTGGCGATGGCGTTGGCTATTGGTAGTGGTGTGGCACCCCAGTACGGTTTATATACCGCAGCTGTTGCGGGGATTGTCATTGCTCTGACGGGTGGGTCACGCTTTAGCGTTTCCGGTCCGACTGCGGCATTTGTGGTAATTCTCTATCCCGTGTCGCAACAGTTTGGACTGGCAGGACTGCTGGTTGCGACCTTGCTGTCGGGGATCTTTTTGATTCTGATGGGTCTGGCACGCTTTGGTCGCCTGATTGAGTATATTCCGGTTTCCGTCACCTTAGGTTTCACCTCGGGTATCGGGATCACCATCGGTACCATGCAGATTAAAGATTTTCTCGGTCTGCAAATGGCCCATGTCCCGGAACATTATCTACAAAAAGTCGGCGCATTATTTATGGCGCTGCCGACCATTAATGTGGGTGATGCTGCCATTGGCATTGTGACGCTAGGTATTCTTGTTTTTTGGCCGCGTCTGGGCATTCGTTTACCCGGTCACCTTCCGGCCTTGCTGGCTGGTTGCGCGGTGATGGGGATTGTTAACCTGCTCGGCGGACATGTTGCTACCATCGGTTCGCAATTCCACTACGTCCTGGCCGATGGTTCTCAGGGTAACGGTATTCCGCAACTGCTGCCGCAACTGGTGCTGCCGTGGGATCTGCCTAATTCAGAATTCACGCTAACCTGGGATTCTATTCGCACACTGCTGCCTGCGGCATTCTCAATGGCAATGCTCGGCGCAATCGAATCTCTGCTCTGCGCCGTGGTGCTGGATGGTATGACCGGGACGAAACACAAGGCGAACAGCGAACTGGTTGGACAGGGACTGGGGAATATTATCGCTCCGTTCTTTGGTGGTATTACCGCTACAGCTGCCATCGCGCGTTCTGCCGCTAACGTCCGTGCCGGGGCAACGTCCCCTATCTCGGCGGTGATCCACTCTATTCTGGTTATTCTTGCCCTGCTGGTACTGGCACCGCTGCTCTCCTGGCTGCCGCTTTCCGCCATGGCAGCCCTGCTGTTGATGGTGGCGTGGAACATGAGTGAAGCGCACAAAGTGGTCGACTTGCTGCGTCATGCGCCGAAAGATGACATCATCGTCATGCTGCTGTGCATGTCGCTGACCGTGTTGTTTGATATGGTTATTGCCATCAGCGTGGGGATCGTGCTGGCATCGCTGCTGTTTATGCGTCGTATCGCACGTATGACTCGCCTGGCACCGGTAGTCGTAGATGTTCCAGACGATGTCCTGGTTCTGCGCGTTATTGGCCCGCTGTTTTTTGCTGCTGCTGAAGGCTTATTCACGGACCTGGAGTCACGTCTTGAAGGCAAACGGATTGTGATTCTGAAGTGGGATGCCGTTCCGGTACTTGATGCTGGTGGTCTTGATGCGTTCCAGCGTTTTGTGAAGCGTCTGCCCGAGGGATGTGAACTGCGCGTGTGCAACGTGGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCGATCCCGGGACGCCTGGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAA", + "dna_sequence_length": 1680, + "functions": [ + "C4-dicarboxylic acid transporter" + ], + "id": "CDS_1187", + "location": [ + [ + "NC_000913", + 1260803, + "-", + 1680 + ] + ], + "md5": "3bc494146a404747ef34cd865ea24a52", + "parent_gene": "", + "protein_md5": "aa1e4a061e35c807130469244fee8e81", + "protein_translation": "MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL", + "protein_translation_length": 559, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004054" + ], + [ + "gene_synonym", + "ECK1195" + ], + [ + "gene_synonym", + "EcoGene:EG10774" + ], + [ + "gene_synonym", + "GI:16129170" + ], + [ + "gene_synonym", + "GeneID:945772" + ], + [ + "gene_synonym", + "JW1198" + ], + [ + "gene_synonym", + "NP_415725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A717" + ], + [ + "gene_synonym", + "b1207" + ], + [ + "gene_synonym", + "dnaR" + ], + [ + "gene_synonym", + "prs" + ], + [ + "gene_synonym", + "prsA" + ] + ], + "dna_sequence": "GTGCCTGATATGAAGCTTTTTGCTGGTAACGCCACCCCGGAACTAGCACAACGTATTGCCAACCGCCTGTACACTTCACTCGGCGACGCCGCTGTAGGTCGCTTTAGCGATGGCGAAGTCAGCGTACAAATTAATGAAAATGTACGCGGTGGTGATATTTTCATCATCCAGTCCACTTGTGCCCCTACTAACGACAACCTGATGGAATTAGTCGTTATGGTTGATGCCCTGCGTCGTGCTTCCGCAGGTCGTATCACCGCTGTTATCCCCTACTTTGGCTATGCGCGCCAGGACCGTCGCGTCCGTTCCGCTCGTGTACCAATCACTGCGAAAGTGGTTGCAGACTTCCTCTCCAGCGTCGGTGTTGACCGTGTGCTGACAGTGGATCTGCACGCTGAACAGATTCAGGGTTTCTTCGACGTTCCGGTTGATAACGTATTTGGTAGCCCGATCCTGCTGGAAGACATGCTGCAGCTGAATCTGGATAACCCAATTGTGGTTTCTCCGGACATCGGCGGCGTTGTGCGTGCCCGCGCTATCGCTAAGCTGCTGAACGATACCGATATGGCAATCATCGACAAACGTCGTCCGCGTGCGAACGTTTCACAGGTGATGCATATCATCGGTGACGTTGCAGGTCGTGACTGCGTACTGGTCGATGATATGATCGACACTGGCGGTACGCTGTGTAAAGCTGCTGAAGCTCTGAAAGAACGTGGTGCTAAACGTGTATTTGCGTACGCGACTCACCCGATCTTCTCTGGCAACGCGGCGAACAACCTGCGTAACTCTGTAATTGATGAAGTCGTTGTCTGCGATACCATTCCGCTGAGCGATGAAATCAAATCACTGCCGAACGTGCGTACTCTGACCCTGTCAGGTATGCTGGCCGAAGCGATTCGTCGTATCAGCAACGAAGAATCGATCTCTGCCATGTTCGAACACTAA", + "dna_sequence_length": 948, + "functions": [ + "phosphoribosylpyrophosphate synthase" + ], + "id": "CDS_1188", + "location": [ + [ + "NC_000913", + 1261875, + "-", + 948 + ] + ], + "md5": "1a0db99a8eb6d12df8dbc3ca1d4d0a1e", + "parent_gene": "", + "protein_md5": "e6f72b1a051decd04205145dd9f16f65", + "protein_translation": "MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004056" + ], + [ + "gene_synonym", + "ECK1196" + ], + [ + "gene_synonym", + "EcoGene:EG11294" + ], + [ + "gene_synonym", + "GI:16129171" + ], + [ + "gene_synonym", + "GeneID:945774" + ], + [ + "gene_synonym", + "JW1199" + ], + [ + "gene_synonym", + "NP_415726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62615" + ], + [ + "gene_synonym", + "b1208" + ], + [ + "gene_synonym", + "ipk" + ], + [ + "gene_synonym", + "ispE" + ], + [ + "gene_synonym", + "ychB" + ] + ], + "dna_sequence": "ATGCGGACACAGTGGCCCTCTCCGGCAAAACTTAATCTGTTTTTATACATTACCGGTCAGCGTGCGGATGGTTACCACACGCTGCAAACGCTGTTTCAGTTTCTTGATTACGGCGACACCATCAGCATTGAGCTTCGTGACGATGGGGATATTCGTCTGTTAACGCCCGTTGAAGGCGTGGAACATGAAGATAACCTGATCGTTCGCGCAGCGCGATTGTTGATGAAAACTGCGGCAGACAGCGGGCGTCTTCCGACGGGAAGCGGTGCGAATATCAGCATTGACAAGCGTTTGCCGATGGGCGGCGGTCTCGGCGGTGGTTCATCCAATGCCGCGACGGTCCTGGTGGCATTAAATCATCTCTGGCAATGCGGGCTAAGCATGGATGAGCTGGCGGAAATGGGGCTGACGCTGGGCGCAGATGTTCCTGTCTTTGTTCGGGGGCATGCCGCGTTTGCCGAAGGCGTTGGTGAAATACTAACGCCGGTGGATCCGCCAGAGAAGTGGTATCTGGTGGCGCACCCTGGTGTAAGTATTCCGACTCCGGTGATTTTTAAAGATCCTGAACTCCCGCGCAATACGCCAAAAAGGTCAATAGAAACGTTGCTAAAATGTGAATTCAGCAATGATTGCGAGGTTATCGCAAGAAAACGTTTTCGCGAGGTTGATGCGGTGCTTTCCTGGCTGTTAGAATACGCCCCGTCGCGCCTGACTGGGACAGGGGCCTGTGTCTTTGCTGAATTTGATACAGAGTCTGAAGCCCGCCAGGTGCTAGAGCAAGCCCCGGAATGGCTCAATGGCTTTGTGGCGAAAGGCGCTAATCTTTCCCCATTGCACAGAGCCATGCTTTAA", + "dna_sequence_length": 852, + "functions": [ + "4-diphosphocytidyl-2-C-methylerythritol kinase" + ], + "id": "CDS_1189", + "location": [ + [ + "NC_000913", + 1262877, + "-", + 852 + ] + ], + "md5": "6ba81d44fa9bf58d692a591c59086888", + "parent_gene": "", + "protein_md5": "29dbb1a117a0f251a3ad258fc2b25495", + "protein_translation": "MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004059" + ], + [ + "gene_synonym", + "ECK1197" + ], + [ + "gene_synonym", + "EcoGene:EG11293" + ], + [ + "gene_synonym", + "GI:16129172" + ], + [ + "gene_synonym", + "GeneID:945775" + ], + [ + "gene_synonym", + "JW1200" + ], + [ + "gene_synonym", + "NP_415727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61320" + ], + [ + "gene_synonym", + "b1209" + ], + [ + "gene_synonym", + "hemM" + ], + [ + "gene_synonym", + "lolB" + ], + [ + "gene_synonym", + "ychC" + ] + ], + "dna_sequence": "ATGCCCCTGCCCGATTTTCGTCTTATCCGCCTGCTACCGCTGGCTGCTCTTGTGCTCACTGCCTGTTCCGTTACCACGCCCAAAGGTCCTGGCAAAAGCCCGGATTCGCCACAATGGCGTCAGCATCAGCAAGACGTGCGCAATCTTAATCAGTATCAGACTCGCGGCGCGTTCGCTTATATTTCTGACCAACAAAAAGTGTACGCCCGCTTTTTCTGGCAGCAAACCGGCCAGGATCGCTACCGTCTGCTGCTCACTAACCCATTGGGCAGCACGGAACTGGAGCTGAATGCTCAACCGGGTAACGTGCAGTTAGTCGACAATAAAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAACAGCTTGCGCCAGTGGATTTTAGGTTTACCGGGTGATGCAACCGACTACAAACTGGACGACCAGTACCGCCTGAGCGAAATTACCTACAGCCAGAATGGCAAAAACTGGAAGGTTGTTTATGGTGGTTATGACACCAAAACGCAACCTGCGATGCCAGCCAATATGGAACTCACCGACGGTGGTCAACGCATCAAGTTAAAAATGGATAACTGGATAGTGAAATAA", + "dna_sequence_length": 624, + "functions": [ + "lipoprotein localization factor" + ], + "id": "CDS_1190", + "location": [ + [ + "NC_000913", + 1263500, + "-", + 624 + ] + ], + "md5": "6ba6cb677a88b1d0c0f8d4b4c755005c", + "parent_gene": "", + "protein_md5": "0ee76a0fad6fa3a5e263937ab7232d9e", + "protein_translation": "MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004064" + ], + [ + "gene_synonym", + "ECK1198" + ], + [ + "gene_synonym", + "EcoGene:EG10427" + ], + [ + "gene_synonym", + "GI:16129173" + ], + [ + "gene_synonym", + "GeneID:945777" + ], + [ + "gene_synonym", + "JW1201" + ], + [ + "gene_synonym", + "NP_415728.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6X1" + ], + [ + "gene_synonym", + "b1210" + ], + [ + "gene_synonym", + "gtrA" + ], + [ + "gene_synonym", + "hemA" + ] + ], + "dna_sequence": "ATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCTGCGTAAAAGCCTCTACTGGCATCAGGATAACGACGCGGTTAGCCATTTAATGCGTGTTGCCAGCGGCCTGGATTCACTGGTTCTGGGGGAGCCGCAGATCCTCGGTCAGGTTAAAAAAGCGTTTGCCGATTCGCAAAAAGGTCATATGAAGGCCAGCGAACTGGAACGCATGTTCCAGAAATCTTTCTCTGTCGCGAAACGCGTTCGCACTGAAACAGATATCGGTGCCAGCGCTGTGTCTGTCGCTTTTGCGGCTTGTACGCTGGCGCGGCAGATCTTTGAATCGCTCTCTACGGTCACAGTGTTGCTGGTAGGCGCGGGCGAAACTATCGAGCTGGTGGCGCGTCATCTGCGCGAACACAAAGTACAGAAGATGATTATCGCCAACCGCACTCGCGAACGTGCCCAAATTCTGGCAGATGAAGTCGGCGCGGAAGTGATTGCCCTGAGTGATATCGACGAACGTCTGCGCGAAGCCGATATCATCATCAGTTCCACCGCCAGCCCGTTACCGATTATCGGGAAAGGCATGGTGGAGCGCGCATTAAAAAGCCGTCGCAACCAACCAATGCTGTTGGTGGATATTGCCGTTCCGCGCGATGTTGAGCCGGAAGTTGGCAAACTGGCGAATGCTTATCTTTATAGCGTTGATGATCTGCAAAGCATCATTTCGCACAACCTGGCGCAGCGTAAAGCCGCAGCGGTTGAGGCGGAAACTATTGTCGCTCAGGAAACCAGCGAATTTATGGCGTGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAG", + "dna_sequence_length": 1257, + "functions": [ + "glutamyl tRNA reductase" + ], + "id": "CDS_1191", + "location": [ + [ + "NC_000913", + 1263714, + "+", + 1257 + ] + ], + "md5": "0f18218b4a84f46b9c206ed1bf724524", + "parent_gene": "", + "protein_md5": "3cf93802fe5816e9d12b939a19da52dd", + "protein_translation": "MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAWLRAQSASETIREYRSQAEQVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004066" + ], + [ + "gene_synonym", + "ECK1199" + ], + [ + "gene_synonym", + "EcoGene:EG10761" + ], + [ + "gene_synonym", + "GI:16129174" + ], + [ + "gene_synonym", + "GeneID:949002" + ], + [ + "gene_synonym", + "JW1202" + ], + [ + "gene_synonym", + "NP_415729.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7I0" + ], + [ + "gene_synonym", + "b1211" + ], + [ + "gene_synonym", + "prfA" + ], + [ + "gene_synonym", + "sueB" + ], + [ + "gene_synonym", + "uar" + ], + [ + "gene_synonym", + "ups?" + ] + ], + "dna_sequence": "ATGAAGCCTTCTATCGTTGCCAAACTGGAAGCCCTGCATGAACGCCATGAAGAAGTTCAGGCGTTGCTGGGTGACGCGCAAACTATCGCCGACCAGGAACGTTTTCGCGCATTATCACGCGAATATGCGCAGTTAAGTGATGTTTCGCGCTGTTTTACCGACTGGCAACAGGTTCAGGAAGATATCGAAACCGCACAGATGATGCTCGATGATCCTGAAATGCGTGAGATGGCGCAGGATGAACTGCGCGAAGCTAAAGAAAAAAGCGAGCAACTGGAACAGCAATTACAGGTTCTGTTACTGCCAAAAGATCCTGATGACGAACGTAACGCCTTCCTCGAAGTCCGAGCCGGAACCGGCGGCGACGAAGCGGCGCTGTTCGCGGGCGATCTGTTCCGTATGTACAGCCGTTATGCCGAAGCCCGCCGCTGGCGGGTAGAAATCATGAGCGCCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTCACTTGCCGACCGGGATTGTTGTTGAATGTCAGGACGAACGTTCACAACATAAAAACAAAGCTAAAGCACTTTCTGTTCTCGGTGCTCGCATCCACGCTGCTGAAATGGCAAAACGCCAACAGGCCGAAGCGTCTACCCGTCGTAACCTGCTGGGGAGTGGCGATCGCAGCGACCGTAACCGTACTTACAACTTCCCGCAGGGGCGCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAA", + "dna_sequence_length": 1083, + "functions": [ + "peptide chain release factor RF-1" + ], + "id": "CDS_1192", + "location": [ + [ + "NC_000913", + 1265012, + "+", + 1083 + ] + ], + "md5": "0d3698bfb7825dfd5b08c5666a7a1013", + "parent_gene": "", + "protein_md5": "ebe0a3fcfb3e5d36ef27b7a5954b597f", + "protein_translation": "MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE", + "protein_translation_length": 360, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004068" + ], + [ + "gene_synonym", + "ECK1200" + ], + [ + "gene_synonym", + "EcoGene:EG12424" + ], + [ + "gene_synonym", + "GI:16129175" + ], + [ + "gene_synonym", + "GeneID:945779" + ], + [ + "gene_synonym", + "JW1203" + ], + [ + "gene_synonym", + "NP_415730.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACC1" + ], + [ + "gene_synonym", + "b1212" + ], + [ + "gene_synonym", + "hemK" + ], + [ + "gene_synonym", + "prmC" + ] + ], + "dna_sequence": "ATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGCCTTTGGTGAAACGCAGCTGACTGACGAACAATGTCAGCAACTTGATGCGCTACTGACACGTCGTCGCGATGGTGAACCCATTGCTCATTTAACCGGGGTGCGAGAATTCTGGTCGTTGCCGTTATTTGTTTCGCCAGCGACCTTAATTCCGCGCCCGGATACGGAGTGTCTGGTGGAGCAGGCACTGGCGCGGTTGCCTGAACAACCTTGCCGTATTCTCGATCTCGGGACGGGTACCGGGGCGATTGCGCTTGCGCTGGCTAGCGAGCGCCCGGACTGCGAAATTATCGCTGTAGATCGTATGCCTGATGCTGTCTCCCTGGCACAACGTAATGCCCAGCATCTGGCGATCAAAAATATCCACATTCTGCAAAGCGACTGGTTTAGCGCGCTAGCCGGGCAGCAGTTTGCGATGATTGTCAGCAATCCGCCGTATATTGACGAGCAGGACCCTCATCTTCAACAAGGCGATGTCCGCTTTGAGCCGCTCACTGCGCTGGTTGCGGCAGACAGTGGAATGGCAGACATCGTGCATATCATCGAACAGTCGCGTAACGCGCTGGTATCCGGCGGCTTTCTGCTTCTGGAACATGGCTGGCAGCAGGGCGAAGCGGTGCGACAAGCATTTATCCTCGCGGGGTATCATGACGTCGAAACCTGCCGTGACTATGGTGATAACGAGCGCGTAACGCTCGGCCGCTATTATCAATGA", + "dna_sequence_length": 834, + "functions": [ + "RF-1 and RF-2 N5-glutamine methyltransferase" + ], + "id": "CDS_1193", + "location": [ + [ + "NC_000913", + 1266094, + "+", + 834 + ] + ], + "md5": "a4307931c4b1b30c487364a3be36a585", + "parent_gene": "", + "protein_md5": "25069df14c958fde0c20e5dc3612aed3", + "protein_translation": "MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYYQ", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004071" + ], + [ + "gene_synonym", + "ECK1201" + ], + [ + "gene_synonym", + "EcoGene:EG14293" + ], + [ + "gene_synonym", + "GI:16129176" + ], + [ + "gene_synonym", + "GeneID:945781" + ], + [ + "gene_synonym", + "JW1204" + ], + [ + "gene_synonym", + "NP_415731.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46755" + ], + [ + "gene_synonym", + "b1213" + ], + [ + "gene_synonym", + "sirB2" + ], + [ + "gene_synonym", + "ychQ" + ] + ], + "dna_sequence": "ATGACAAGTTTTTCTACACTGCTTAGTGTTCATCTTATTAGTATCGCGCTTTCTGTTGGGCTATTAACCTTACGTTTCTGGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCTGTACATCATCATTAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAA", + "dna_sequence_length": 393, + "functions": [ + "SIRB family inner membrane protein" + ], + "id": "CDS_1194", + "location": [ + [ + "NC_000913", + 1266924, + "+", + 393 + ] + ], + "md5": "f3b235bcb7149feff7316d197829a638", + "parent_gene": "", + "protein_md5": "01594cfc8ebd1478000babc7e0515264", + "protein_translation": "MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLLG", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004074" + ], + [ + "gene_synonym", + "ECK1202" + ], + [ + "gene_synonym", + "EcoGene:EG11251" + ], + [ + "gene_synonym", + "GI:16129177" + ], + [ + "gene_synonym", + "GeneID:945784" + ], + [ + "gene_synonym", + "JW1205" + ], + [ + "gene_synonym", + "NP_415732.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM5" + ], + [ + "gene_synonym", + "b1214" + ], + [ + "gene_synonym", + "sirB1" + ], + [ + "gene_synonym", + "ychA" + ] + ], + "dna_sequence": "ATGAGATCGTTAGCTGATTTCGAATTTAATAAAGCGCCATTGTGCGAAGGCATGATCCTGGCTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGTCTCGTTAGTCTGGCGAAGGAAGAAATCAGCCAGCTTCTGCCTTTAGAAGAGCAGTTGGAAAAACTGATCGCGCTGTTTTACGGCGACTGGGGATTTAAAGCCTCACGCGGTGTTTATCGTCTTTCCGATGCATTATGGCTGGACCAGGTGTTAAAGAATCGACAGGGCAGTGCGGTATCATTAGGTGCGGTTTTATTATGGGTCGCGAATCGTCTCGATTTGCCGCTGCTGCCGGTGATTTTCCCTACGCAGCTGATATTGCGCATTGAATGTCCGGATGGCGAAATTTGGCTGATTAATCCTTTTAACGGTGAATCGTTAAGCGAACATATGCTGGACGTATGGTTAAAGGGAAATATCAGCCCGTCGGCGGAACTGTTTTATGAAGACCTTGATGAAGCTGATAACATTGAGGTAATCCGCAAATTGCTGGATACACTCAAAGCCTCGTTGATGGAAGAAAATCAGATGGAGCTGGCGTTACGCACCAGCGAAGCTTTATTACAATTCAACCCTGAAGATCCCTATGAAATTCGCGATCGCGGGTTGATTTATGCGCAACTGGATTGCGAACACGTTGCGTTGAACGATTTAAGTTATTTCGTTGAACAGTGTCCGGAAGACCCGATCAGCGAAATGATCCGTGCGCAAATAAATAACATCGCGCATAAACATATTGTGCTGCATTAA", + "dna_sequence_length": 810, + "functions": [ + "transglutaminase-like TPR-repeat protein" + ], + "id": "CDS_1195", + "location": [ + [ + "NC_000913", + 1267320, + "+", + 810 + ] + ], + "md5": "6c98207108f2afc5723f13f721d32f5e", + "parent_gene": "", + "protein_md5": "391ba96281ac0e1a17c55f5bfdac2884", + "protein_translation": "MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004077" + ], + [ + "gene_synonym", + "ECK1203" + ], + [ + "gene_synonym", + "EcoGene:EG10518" + ], + [ + "gene_synonym", + "GI:16129178" + ], + [ + "gene_synonym", + "GeneID:945785" + ], + [ + "gene_synonym", + "JW1206" + ], + [ + "gene_synonym", + "NP_415733.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A715" + ], + [ + "gene_synonym", + "b1215" + ], + [ + "gene_synonym", + "kdsA" + ] + ], + "dna_sequence": "ATGAAACAAAAAGTGGTTAGCATTGGCGACATCAACGTAGCAAATGACCTGCCGTTCGTACTGTTTGGCGGTATGAACGTGTTGGAATCTCGCGATCTGGCGATGCGCATTTGCGAGCACTACGTAACTGTGACCCAGAAACTGGGTATCCCTTACGTGTTCAAAGCCTCTTTTGACAAAGCCAACCGCTCCTCCATCCACTCTTATCGTGGACCGGGCCTGGAAGAAGGGATGAAAATCTTCCAGGAGTTGAAGCAGACTTTTGGCGTGAAAATTATCACCGACGTTCACGAACCAAGTCAGGCACAGCCCGTTGCTGATGTCGTGGATGTGATTCAGTTGCCGGCGTTTCTTGCTCGCCAGACTGACCTGGTTGAAGCCATGGCGAAAACCGGTGCGGTAATTAACGTCAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTGGCACGAGCCGGTATGGCGGTAGGTCTGGCGGGGCTGTTTATTGAAGCGCATCCGGATCCGGAACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAA", + "dna_sequence_length": 855, + "functions": [ + "3-deoxy-D-manno-octulosonate 8-phosphate synthase" + ], + "id": "CDS_1196", + "location": [ + [ + "NC_000913", + 1268165, + "+", + 855 + ] + ], + "md5": "b16d1466897d482d5f181be3ac4c84a4", + "parent_gene": "", + "protein_md5": "d63d61068f94d5289d7c8b5c6079f26a", + "protein_translation": "MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047280" + ], + [ + "gene_synonym", + "ECK1204" + ], + [ + "gene_synonym", + "EcoGene:EG14403" + ], + [ + "gene_synonym", + "GI:49176087" + ], + [ + "gene_synonym", + "GeneID:2847733" + ], + [ + "gene_synonym", + "JW5957" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF86" + ], + [ + "gene_synonym", + "YP_025297.1" + ], + [ + "gene_synonym", + "b4419" + ], + [ + "gene_synonym", + "ldrA" + ] + ], + "dna_sequence": "ATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGATTGTCAGCTGGTGGCGTAACCGGAAGTAA", + "dna_sequence_length": 108, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_1197", + "location": [ + [ + "NC_000913", + 1269275, + "-", + 108 + ] + ], + "md5": "3098e0e932260cdd51ba0acc5f9f5497", + "parent_gene": "", + "protein_md5": "0dc3e987eab4546d4cc5b2c564a7e27f", + "protein_translation": "MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047281" + ], + [ + "gene_synonym", + "ECK1206" + ], + [ + "gene_synonym", + "EcoGene:EG14404" + ], + [ + "gene_synonym", + "GI:49176088" + ], + [ + "gene_synonym", + "GeneID:2847735" + ], + [ + "gene_synonym", + "JW5958" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF87" + ], + [ + "gene_synonym", + "YP_025298.1" + ], + [ + "gene_synonym", + "b4421" + ], + [ + "gene_synonym", + "ldrB" + ] + ], + "dna_sequence": "ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTATTACCGCAGCGATTGTCGGCTGGTGGCGTAACCGGAAGTAA", + "dna_sequence_length": 108, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_1198", + "location": [ + [ + "NC_000913", + 1269810, + "-", + 108 + ] + ], + "md5": "7d84efc139edf182a92839eda4f41a8f", + "parent_gene": "", + "protein_md5": "e71043910d3a7c4ccae05d7eb9a4ca5c", + "protein_translation": "MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047282" + ], + [ + "gene_synonym", + "ECK1208" + ], + [ + "gene_synonym", + "EcoGene:EG14405" + ], + [ + "gene_synonym", + "GI:49176089" + ], + [ + "gene_synonym", + "GeneID:2847775" + ], + [ + "gene_synonym", + "JW5959" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF86" + ], + [ + "gene_synonym", + "YP_025299.1" + ], + [ + "gene_synonym", + "b4423" + ], + [ + "gene_synonym", + "ldrC" + ] + ], + "dna_sequence": "ATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGATTGTCAGCTGGTGGCGTAACCGGAAGTAA", + "dna_sequence_length": 108, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_1199", + "location": [ + [ + "NC_000913", + 1270345, + "-", + 108 + ] + ], + "md5": "3098e0e932260cdd51ba0acc5f9f5497", + "parent_gene": "", + "protein_md5": "0dc3e987eab4546d4cc5b2c564a7e27f", + "protein_translation": "MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004082" + ], + [ + "gene_synonym", + "ECK1210" + ], + [ + "gene_synonym", + "EcoGene:EG11753" + ], + [ + "gene_synonym", + "GI:16129179" + ], + [ + "gene_synonym", + "GeneID:945790" + ], + [ + "gene_synonym", + "JW1207" + ], + [ + "gene_synonym", + "NP_415734.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31801" + ], + [ + "gene_synonym", + "b1216" + ], + [ + "gene_synonym", + "chaA" + ] + ], + "dna_sequence": "ATGTCAAATGCTCAAGAGGCGGTAAAAACCCGCCACAAGGAGACTTCGCTTATTTTCCCGGTTCTGGCGCTGGTAGTGCTGTTCCTGTGGGGAAGCAGCCAGACACTACCAGTGGTCATTGCCATCAATCTTCTTGCGCTTATTGGTATTTTAAGTAGCGCCTTTAGTGTTGTCCGTCATGCGGACGTATTAGCCCATCGCCTGGGAGAACCTTACGGTTCGCTTATTCTTAGCCTTTCAGTGGTTATTCTTGAAGTCAGTTTGATTTCAGCTTTAATGGCAACCGGCGACGCCGCGCCAACGCTAATGCGTGATACGCTCTATTCAATCATTATGATTGTTACCGGTGGGCTGGTTGGCTTTTCATTATTGTTGGGCGGTCGTAAGTTTGCCACCCAATATATGAATCTGTTTGGTATCAAGCAGTATTTAATTGCGCTGTTCCCCCTGGCGATAATCGTACTGGTATTTCCAATGGCTCTGCCTGCGGCGAATTTTTCAACCGGTCAGGCGTTACTGGTAGCATTAATTTCTGCGGCAATGTATGGCGTATTTTTGCTGATCCAGACCAAAACGCATCAAAGTTTGTTTGTCTACGAGCACGAAGATGACAGTGATGATGACGACCCGCATCACGGTAAACCGTCTGCCCATAGCAGCCTGTGGCATGCTATCTGGTTGATTATCCATCTGATTGCCGTTATTGCGGTGACCAAAATGAACGCCAGCTCGCTGGAGACATTGCTCGACAGCATGAATGCCCCTGTCGCCTTTACTGGCTTCCTGGTGGCACTGTTGATTCTGTCGCCGGAAGGTTTAGGTGCATTAAAAGCAGTGTTGAACAACCAGGTTCAGCGCGCGATGAATCTGTTCTTTGGTTCAGTGTTAGCAACCATTTCGCTTACCGTACCTGTCGTCACGCTAATTGCCTTTATGACGGGTAACGAATTGCAGTTTGCACTTGGTGCGCCAGAAATGGTGGTGATGGTGGCCTCTTTAGTGCTGTGCCATATCTCCTTCTCCACCGGACGTACTAACGTGCTCAATGGCGCAGCGCATCTGGCACTGTTTGCCGCCTATTTGATGACGATATTTGCCTGA", + "dna_sequence_length": 1101, + "functions": [ + "calcium/sodium:proton antiporter" + ], + "id": "CDS_1200", + "location": [ + [ + "NC_000913", + 1271849, + "-", + 1101 + ] + ], + "md5": "4e1892877a5edc95900602960f68ba21", + "parent_gene": "", + "protein_md5": "3c778838db426eafafa86324b8c1dd40", + "protein_translation": "MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSLWHAIWLIIHLIAVIAVTKMNASSLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIFA", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004087" + ], + [ + "gene_synonym", + "ECK1211" + ], + [ + "gene_synonym", + "EcoGene:EG12402" + ], + [ + "gene_synonym", + "GI:16129180" + ], + [ + "gene_synonym", + "GeneID:945792" + ], + [ + "gene_synonym", + "JW1208" + ], + [ + "gene_synonym", + "NP_415735.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE63" + ], + [ + "gene_synonym", + "b1217" + ], + [ + "gene_synonym", + "chaB" + ] + ], + "dna_sequence": "ATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGCGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTGGGCTGCTGTGAAGCATGAATATGCCAAAGGGGATGATGATAAATGGCATAAAAAATCGTAA", + "dna_sequence_length": 231, + "functions": [ + "cation transport regulator" + ], + "id": "CDS_1201", + "location": [ + [ + "NC_000913", + 1272119, + "+", + 231 + ] + ], + "md5": "5c060d9cd792bb8e0c4916d72b1695f5", + "parent_gene": "", + "protein_md5": "04a2ee16744fe2b52290f8ce9c2ab392", + "protein_translation": "MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004089" + ], + [ + "gene_synonym", + "ECK1212" + ], + [ + "gene_synonym", + "EcoGene:EG12403" + ], + [ + "gene_synonym", + "GI:145698247" + ], + [ + "gene_synonym", + "GeneID:945793" + ], + [ + "gene_synonym", + "JW1209" + ], + [ + "gene_synonym", + "NP_415736.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39163" + ], + [ + "gene_synonym", + "b1218" + ], + [ + "gene_synonym", + "chaC" + ] + ], + "dna_sequence": "GTGATAACGCGTGATTTCTTGATGAATGCCGATTGTAAAACGGCATTTGGTGCCATTGAAGAATCACTCTTATGGTCAGCAGAACAACGGGCGGCTTCGCTGGCGGCGACGCTGGCTTGTCGACCTGATGAGGGACCGGTGTGGATCTTCGGCTATGGATCGTTGATGTGGAATCCGGCACTGGAGTTTACCGAATCGTGCACCGGTACACTGGTTGGATGGCATCGCGCATTTTGCCTGCGCCTGACCGCCGGGCGCGGGACTGCGCACCAGCCGGGACGGATGCTTGCACTGAAAGAGGGCGGACGCACCACAGGCGTCGCCTATCGACTGCCAGAAGAGACGCTGGAGCAGGAACTAACCCTGTTGTGGAAGCGAGAGATGATTACCGGCTGTTATCTGCCAACCTGGTGTCAGCTTGATCTTGATGATGGACGCACAGTAAACGCCATTGTGTTTATTATGGACCCGCGACATCCAGAATATGAATCTGATACTCGCGCTCAGGTCATCGCGCCGTTGATTGCGGCGGCGAGCGGTCCGCTGGGAACCAACGCACAATACCTGTTTTCACTGGAACAGGAGCTTATCAAACTGGGAATGCAGGACGATGGGCTGAATGATTTGCTGGTATCGGTAAAAAAACTGCTGGCGGAGAATTTTCCGGATGGTGTGTTACGTCCGGGATTCGCCTGA", + "dna_sequence_length": 696, + "functions": [ + "cation transport regulator" + ], + "id": "CDS_1202", + "location": [ + [ + "NC_000913", + 1272507, + "+", + 696 + ] + ], + "md5": "798de283ca49b8cec72f92da64fac4c7", + "parent_gene": "", + "protein_md5": "7afc5e8c1f234a52431f4c53d61020c8", + "protein_translation": "MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENFPDGVLRPGFA", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004091" + ], + [ + "gene_synonym", + "ECK1213" + ], + [ + "gene_synonym", + "EcoGene:EG12404" + ], + [ + "gene_synonym", + "GI:16129182" + ], + [ + "gene_synonym", + "GeneID:945794" + ], + [ + "gene_synonym", + "JW1210" + ], + [ + "gene_synonym", + "NP_415737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB52" + ], + [ + "gene_synonym", + "b1219" + ], + [ + "gene_synonym", + "ychN" + ] + ], + "dna_sequence": "ATGCAAAAAATCGTGATCGTTGCCAATGGCGCACCTTACGGGAGCGAATCCTTGTTTAACAGCTTGCGGCTGGCCATTGCGTTACGAGAGCAGGAGAGCAATCTGGATCTGCGTCTGTTCCTCATGTCTGATGCGGTCACAGCCGGGTTGCGCGGGCAAAAACCAGGGGAAGGCTACAACATTCAGCAAATGCTGGAGATCCTTACCGCTCAGAATGTACCGGTGAAATTGTGCAAAACCTGTACCGACGGGCGCGGGATTAGTACACTTCCTCTGATTGATGGGGTGGAAATCGGTACTCTTGTGGAACTGGCGCAATGGACGCTGTCAGCCGATAAAGTGCTCACATTTTAA", + "dna_sequence_length": 354, + "functions": [ + "putative sulfur relay protein" + ], + "id": "CDS_1203", + "location": [ + [ + "NC_000913", + 1273599, + "-", + 354 + ] + ], + "md5": "be44588bff89a918e7676719705297d3", + "parent_gene": "", + "protein_md5": "e76d2cf421d530036f7632cf4ec6ba0d", + "protein_translation": "MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004095" + ], + [ + "gene_synonym", + "ECK1214" + ], + [ + "gene_synonym", + "EcoGene:EG12405" + ], + [ + "gene_synonym", + "GI:145698248" + ], + [ + "gene_synonym", + "GeneID:945801" + ], + [ + "gene_synonym", + "JW1211" + ], + [ + "gene_synonym", + "NP_415738.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39165" + ], + [ + "gene_synonym", + "b1220" + ], + [ + "gene_synonym", + "ychO" + ], + [ + "gene_synonym", + "ychP" + ] + ], + "dna_sequence": "TTGAGCCGTTTCGTTCCTCGCATTATCCCGTTTTATTTACTCTTGCTTGTAGCAGGCGGTACAGCTAACGCACAATCTACCTTCGAGCAAAAAGCGGCAAATCCCTTTGATAATAACAATGATGGTCTGCCGGATTTAGGCATGGCTCCCGAAAATCATGATGGGGAAAAACACTTTGCTGAAATTGTGAAAGATTTCGGCGAAACCAGTATGAATGATAACGGGCTGGATACTGGCGAGCAGGCAAAAGCTTTCGCATTGGGAAAAGTCCGCGACGCGCTTAGTCAACAGGTTAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTATCACAATCCCGTCGCGTTGAGTCTGGGATTAAATTACACCCCTGTGCCATTAGTCACTGTGACGGCCCAGCATAAACAGGGTGAAAGTGGCGAAAATCAAAATAACCTCGGGCTGAATCTTAATTACCGCTTTGGTGTACCGCTCAAAAAACAACTTTCTGCGGGCGAGGTTGCCGAAAGTCAGTCGTTACGTGGTAGTCGCTATGACAATCCGCAGCGAAATAATCTACCGACTCTTGAGTACCGACAGCGAAAAACGTTAACGGTGTTTCTGGCGACACCGCCGTGGGATCTAAAACCTGGCGAAACAGTGCCGCTGAAATTACAAATCCGCAGTCGTTACGGTATTCGGCAACTGATTTGGCAGGGCGATACGCAGATATTAAGTTTGACGCCGGGCGCACAAGCCAACAGCGCGGAGGGCTGGACGCTGATCATGCCTGACTGGCAGAACGGGGAAGGGGCAAGCAATCACTGGCGATTGTCTGTGGTGGTGGAAGATAACCAGGGGCAGCGTGTCTCCTCCAATGAGATCACGCTAACGCTTGTCGAACCGTTCGATGCATTGTCAAACGACGAACTGCGCTGGGAACCGTAA", + "dna_sequence_length": 1395, + "functions": [ + "putative invasin" + ], + "id": "CDS_1204", + "location": [ + [ + "NC_000913", + 1273784, + "+", + 1395 + ] + ], + "md5": "57b48cf6f01c832691b2b12fb3599039", + "parent_gene": "", + "protein_md5": "b5cdeb2139fb7df3ebc607fcbaa1b418", + "protein_translation": "MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYLTWSQLGLTQQDNGLVSNVGVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP", + "protein_translation_length": 464, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004097" + ], + [ + "gene_synonym", + "ECK1215" + ], + [ + "gene_synonym", + "EcoGene:EG10643" + ], + [ + "gene_synonym", + "GI:16129184" + ], + [ + "gene_synonym", + "GeneID:945795" + ], + [ + "gene_synonym", + "JW1212" + ], + [ + "gene_synonym", + "NP_415739.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF28" + ], + [ + "gene_synonym", + "b1221" + ], + [ + "gene_synonym", + "frdR" + ], + [ + "gene_synonym", + "narL" + ] + ], + "dna_sequence": "ATGAGTAATCAGGAACCGGCTACTATCCTGCTGATTGACGATCACCCGATGCTGCGAACTGGCGTAAAACAGCTTATCAGTATGGCACCAGATATCACCGTGGTTGGCGAAGCGAGTAATGGCGAACAGGGTATTGAACTGGCGGAGTCTCTTGATCCCGATCTGATCCTGTTAGATCTCAATATGCCCGGCATGAACGGTCTGGAAACGCTGGATAAACTGCGCGAAAAGTCCCTCTCAGGGCGCATTGTGGTATTCAGCGTCTCTAACCATGAAGAAGATGTGGTCACCGCACTGAAACGCGGCGCGGATGGCTATCTGTTAAAAGATATGGAACCGGAAGATCTGCTGAAAGCATTGCATCAGGCAGCTGCTGGCGAAATGGTATTAAGCGAAGCATTAACGCCTGTTCTGGCCGCCAGCTTGCGCGCTAACCGTGCCACTACTGAGCGCGATGTTAACCAGTTAACCCCACGCGAGCGCGATATTCTCAAGCTGATTGCCCAGGGTTTGCCGAACAAGATGATTGCCCGCCGCCTGGATATCACCGAAAGCACAGTAAAAGTGCACGTCAAGCACATGCTGAAGAAAATGAAGCTCAAGTCTCGCGTGGAAGCAGCGGTATGGGTGCATCAGGAGCGCATTTTCTGA", + "dna_sequence_length": 651, + "functions": [ + "response regulator in two-component regulatory system with NarX" + ], + "id": "CDS_1205", + "location": [ + [ + "NC_000913", + 1275829, + "-", + 651 + ] + ], + "md5": "11d854ea4133f2ace19ea6fb6275d369", + "parent_gene": "", + "protein_md5": "8f80a9379e52023221a7cf06252eb4cc", + "protein_translation": "MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004099" + ], + [ + "gene_synonym", + "ECK1216" + ], + [ + "gene_synonym", + "EcoGene:EG10646" + ], + [ + "gene_synonym", + "GI:16129185" + ], + [ + "gene_synonym", + "GeneID:945788" + ], + [ + "gene_synonym", + "JW1213" + ], + [ + "gene_synonym", + "NP_415740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA2" + ], + [ + "gene_synonym", + "b1222" + ], + [ + "gene_synonym", + "frdR" + ], + [ + "gene_synonym", + "narR" + ], + [ + "gene_synonym", + "narX" + ] + ], + "dna_sequence": "ATGCTTAAACGTTGTCTCTCTCCGCTCACCCTGGTTAATCAGGTTGCGCTTATTGTGTTGCTTTCTACTGCTATTGGACTGGCAGGGATGGCGGTTTCTGGCTGGCTGGTGCAAGGCGTTCAGGGCAGCGCCCATGCGATCAACAAAGCGGGATCGCTGCGCATGCAAAGTTACCGTCTGTTGGCGGCAGTGCCATTAAGCGAGAAAGACAAGCCCTTAATTAAAGAGATGGAACAAACGGCATTTAGCGCCGAGTTGACTCGAGCAGCAGAACGAGACGGACAACTGGCGCAATTACAGGGTTTACAAGATTACTGGCGTAATGAACTGATCCCTGCGCTGATGCGTGCACAAAACCGAGAAACGGTGTCAGCGGATGTCAGCCAGTTTGTTGCCGGGCTTGATCAACTGGTATCTGGTTTTGACCGCACCACGGAAATGCGCATCGAGACAGTGGTACTGGTCCATCGGGTAATGGCGGTATTTATGGCACTTTTACTGGTGTTCACTATTATCTGGTTGCGGGCGCGACTGCTACAACCGTGGCGGCAACTGCTGGCAATGGCGAGTGCCGTCAGTCATCGCGATTTTACCCAACGCGCAAACATCAGCGGGCGCAACGAAATGGCGATGCTTGGAACTGCGTTGAACAATATGTCTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTGCGGGTGTATGACACTGATGATGAAGAGAATCATCAGGAGTTTACCTGCCAGCCAGATATGACTTGTGATGATAAAGGCTGCCAGCTCTGCCCGCGCGGCGTATTACCCGTTGGTGATCGCGGCACGACCCTGAAGTGGCGGCTGGCTGACTCTCATACGCAGTACGGTATTTTGCTGGCGACCCTGCCGCAGGGGCGTCATCTTAGCCATGATCAACAACAACTGGTGGATACCCTGGTTGAACAACTCACCGCCACGCTGGCGCTGGATCGCCATCAGGAACGTCAGCAACAGTTGATCGTGATGGAAGAGCGTGCCACCATTGCGCGCGAACTGCATGATTCTATTGCCCAATCTCTCTCTTGCATGAAGATGCAGGTGAGTTGTTTACAGATGCAGGGCGATGCGCTGCCAGAAAGCAGCCGCGAACTGTTAAGTCAGATCCGTAACGAACTGAATGCATCCTGGGCGCAGTTGCGTGAATTGCTCACCACATTCCGCTTGCAGCTCACCGAGCCTGGATTACGTCCGGCGCTGGAGGCGAGTTGCGAAGAGTACAGCGCCAAATTTGGCTTCCCGGTGAAGCTGGATTATCAATTGCCGCCTCGCCTGGTGCCTTCGCATCAGGCAATCCACTTGTTGCAAATTGCCCGTGAGGCATTAAGTAACGCCCTCAAACATTCGCAAGCGAGTGAAGTCGTGGTGACGGTGGCGCAAAACGATAATCAGGTCAAACTGACCGTCCAGGATAACGGCTGCGGCGTGCCTGAAAATGCCATCCGCAGCAATCACTACGGCATGATAATAATGCGCGATCGTGCGCAAAGTTTACGAGGCGATTGCCGCGTCCGCCGTCGTGAATCAGGTGGCACCGAAGTGGTGGTCACCTTTATTCCCGAAAAAACTTTCACAGACGTCCAAGGAGATACCCATGAGTAA", + "dna_sequence_length": 1797, + "functions": [ + "sensory histidine kinase in two-component regulatory system with NarL" + ], + "id": "CDS_1206", + "location": [ + [ + "NC_000913", + 1277618, + "-", + 1797 + ] + ], + "md5": "589dcf0346dc018d2919298ee9571db5", + "parent_gene": "", + "protein_md5": "6750e1d1e39cbbc861c1a454e853fa12", + "protein_translation": "MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE", + "protein_translation_length": 598, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004111" + ], + [ + "gene_synonym", + "ECK1217" + ], + [ + "gene_synonym", + "EcoGene:EG10642" + ], + [ + "gene_synonym", + "GI:16129186" + ], + [ + "gene_synonym", + "GeneID:945783" + ], + [ + "gene_synonym", + "JW1214" + ], + [ + "gene_synonym", + "NP_415741.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10903" + ], + [ + "gene_synonym", + "b1223" + ], + [ + "gene_synonym", + "narK" + ] + ], + "dna_sequence": "ATGAGTCACTCATCCGCCCCCGAAAGGGCTACTGGAGCTGTCATTACAGATTGGCGACCGGAAGATCCTGCGTTCTGGCAACAACGCGGTCAACGTATTGCCAGCCGCAACCTGTGGATTTCCGTTCCCTGTCTGCTGCTGGCGTTTTGCGTATGGATGTTGTTCAGCGCTGTTGCGGTGAACCTACCGAAAGTCGGCTTTAATTTTACGACCGATCAGCTATTTATGTTGACTGCGCTGCCTTCGGTTTCTGGCGCGTTATTACGTGTTCCATACTCCTTTATGGTTCCTATCTTCGGTGGTCGTCGCTGGACGGCGTTCAGCACCGGTATTCTGATTATTCCTTGCGTCTGGCTGGGTTTTGCCGTGCAGGATACCTCCACGCCTTATAGCGTCTTCATCATCATCTCTCTGCTATGCGGCTTTGCTGGCGCGAACTTCGCATCCAGTATGGCAAACATCAGCTTCTTCTTTCCGAAACAGAAGCAGGGTGGCGCGCTGGGTCTGAATGGTGGTCTGGGAAACATGGGCGTCAGCGTCATGCAGTTGGTTGCTCCGCTGGTGGTATCACTGTCGATTTTCGCAGTATTTGGTAGCCAGGGCGTCAAACAGCCGGATGGGACTGAGCTGTATCTGGCGAATGCGTCCTGGATATGGGTGCCGTTCCTTGCCATCTTCACCATTGCGGCGTGGTTTGGCATGAACGATCTTGCTACCTCGAAAGCCTCCATCAAGGAGCAGTTGCCGGTACTCAAACGGGGTCATCTGTGGATTATGAGCCTGCTGTATCTGGCAACCTTCGGCTCCTTCATCGGCTTCTCCGCGGGCTTTGCAATGCTGTCAAAAACGCAGTTCCCGGATGTTCAGATTCTGCAATACGCTTTCTTCGGGCCGTTTATTGGTGCGCTGGCGCGTTCTGCAGGTGGTGCATTATCTGACCGTCTGGGCGGAACTCGTGTCACGCTGGTGAACTTTATTCTGATGGCGATTTTCAGCGGCCTGCTGTTCCTGACCTTACCGACTGACGGGCAGGGCGGAAGCTTCATGGCGTTCTTCGCGGTCTTCCTGGCGCTGTTCCTGACAGCTGGGCTGGGTAGTGGTTCCACTTTCCAGATGATTTCAGTGATCTTCCGTAAACTGACAATGGATCGCGTGAAAGCAGAAGGGGGTTCTGACGAACGTGCGATGCGTGAAGCGGCAACCGACACGGCGGCGGCGCTGGGTTTCATCTCTGCGATTGGCGCGATTGGTGGCTTCTTTATCCCGAAAGCGTTTGGTAGCTCGCTGGCATTAACGGGTTCGCCAGTCGGCGCAATGAAGGTATTTTTGATTTTCTATATCGCCTGCGTAGTGATTACCTGGGCGGTATATGGTCGGCATTCTAAAAAATAA", + "dna_sequence_length": 1392, + "functions": [ + "nitrate/nitrite transporter" + ], + "id": "CDS_1207", + "location": [ + [ + "NC_000913", + 1277957, + "+", + 1392 + ] + ], + "md5": "abd6a20bb77c28338215058d41623b56", + "parent_gene": "", + "protein_md5": "da11db16b90d0c9b98b9deb569040ab4", + "protein_translation": "MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKK", + "protein_translation_length": 463, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004119" + ], + [ + "gene_synonym", + "ECK1218" + ], + [ + "gene_synonym", + "EcoGene:EG10638" + ], + [ + "gene_synonym", + "GI:16129187" + ], + [ + "gene_synonym", + "GeneID:945782" + ], + [ + "gene_synonym", + "JW1215" + ], + [ + "gene_synonym", + "NP_415742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09152" + ], + [ + "gene_synonym", + "b1224" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "narC" + ], + [ + "gene_synonym", + "narG" + ] + ], + "dna_sequence": "ATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATGGGCATGGCCAGCTTCTCAATACCAACCGTGACTGGGAGGATGGATATCGCCAGCGTTGGCAGCATGACAAAATCGTCCGCTCTACCCACGGGGTAAACTGCACCGGCTCCTGCAGCTGGAAAATCTACGTCAAAAACGGTCTGGTCACCTGGGAAACCCAGCAGACTGACTATCCGCGTACCCGTCCGGATCTGCCAAACCATGAACCTCGCGGCTGCCCGCGCGGTGCCAGCTACTCCTGGTATCTTTACAGTGCCAACCGCCTGAAATACCCGATGATGCGCAAACGCCTGATGAAAATGTGGCGTGAAGCGAAGGCGCTGCATAGCGATCCGGTTGAGGCATGGGCTTCTATCATTGAAGACGCCGATAAAGCGAAAAGCTTTAAGCAGGCGCGTGGACGCGGTGGATTTGTTCGTTCTTCCTGGCAGGAGGTGAACGAACTGATCGCCGCATCTAACGTTTACACCATCAAAAACTACGGCCCGGACCGTGTTGCTGGTTTCTCGCCAATTCCGGCAATGTCGATGGTTTCTTACGCATCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCTGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGTACCCCGGATGCTCACTTCTTTACTGAAGTGCGTTACAAAGGGACCAAAACTGTTGCCGTCACACCAGACTACGCTGAAATCGCCAAACTGTGCGATCTGTGGCTGGCACCGAAACAGGGCACCGATGCGGCAATGGCGCTGGCGATGGGCCACGTAATGCTGCGTGAATTCCACCTCGACAACCCAAGCCAGTATTTCACCGACTATGTGCGTCGCTACACCGACATGCCGATGCTGGTGATGCTGGAAGAACGCGACGGTTACTACGCTGCAGGTCGTATGCTGCGCGCTGCTGATCTGGTTGATGCGCTGGGCCAGGAAAACAATCCGGAATGGAAAACTGTCGCCTTTAATACCAATGGCGAAATGGTTGCGCCGAACGGTTCTATTGGCTTCCGCTGGGGCGAGAAGGGCAAATGGAATCTTGAGCAGCGCGACGGCAAAACTGGCGAAGAAACCGAGCTGCAACTGAGCCTGCTGGGTAGCCAGGATGAGATCGCTGAGGTAGGCTTCCCGTACTTTGGTGGCGACGGCACGGAACACTTCAACAAAGTGGAACTGGAAAACGTGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGGCGTTTCTCGCAGCCAGATTATTCGCATCGCCCGTGAATTTGCCGATAACGCTGATAAAACGCACGGTCGTTCGATGATTATCGTCGGTGCGGGGCTGAACCACTGGTATCACCTCGATATGAACTATCGTGGTCTGATCAACATGCTGATTTTCTGCGGCTGTGTCGGTCAGAGCGGGGGCGGCTGGGCGCACTATGTAGGTCAGGAAAAACTGCGTCCGCAAACCGGCTGGCAGCCGCTGGCGTTTGCCCTTGACTGGCAGCGTCCGGCGCGTCACATGAACAGCACTTCTTATTTCTATAACCACTCCAGCCAGTGGCGTTATGAAACCGTCACGGCGGAAGAGTTGCTGTCACCGATGGCGGACAAATCCCGCTATACCGGACACTTGATCGACTTTAACGTCCGTGCGGAACGCATGGGCTGGCTGCCGTCTGCACCGCAGTTAGGCACTAACCCGCTGACTATCGCTGGCGAAGCGGAAAAAGCCGGGATGAATCCGGTGGACTATACGGTGAAATCCCTGAAAGAGGGTTCCATCCGTTTTGCGGCAGAACAACCAGAAAACGGTAAAAACCACCCGCGCAACCTGTTCATCTGGCGTTCTAACCTGCTCGGTTCTTCCGGTAAAGGTCATGAGTTTATGCTCAAGTACCTGCTGGGGACGGAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATCTACAAAGCCATCGCGAAGAAATTCTCCGAAGTGTGCGTCGGCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGAAATCCAACGGCAACCAGGAAAAAGCGCTCAACTTCCTGACGCCGCACCAGAAGTGGGGTATCCACTCCACCTACAGCGACAACCTGCTGATGCTGACTTTAGGTCGCGGTGGTCCGGTGGTCTGGTTGAGTGAAGCCGATGCCAAAGATCTGGGTATCGCCGATAACGACTGGATTGAAGTCTTCAACAGCAACGGTGCTCTGACTGCCCGTGCGGTTGTCAGCCAGCGTGTTCCGGCAGGGATGACCATGATGTACCACGCGCAGGAACGTATCGTTAACCTGCCTGGTTCGGAAATTACCCAACAGCGTGGTGGTATCCATAACTCGGTCACCCGTATCACGCCGAAACCGACGCATATGATCGGCGGCTATGCCCATCTGGCATACGGCTTTAACTACTATGGCACCGTAGGTTCTAACCGCGATGAGTTTGTTGTAGTGCGTAAGATGAAGAACATTGACTGGTTAGATGGCGAAGGCAATGACCAGGTACAGGAGAGCGTAAAATGA", + "dna_sequence_length": 3744, + "functions": [ + "nitrate reductase 1, alpha subunit" + ], + "id": "CDS_1208", + "location": [ + [ + "NC_000913", + 1279864, + "+", + 3744 + ] + ], + "md5": "1aa642ed7f1f1242efe98ee2cf76c3fa", + "parent_gene": "", + "protein_md5": "2393e1b7614eb7f7b893bb8f9ea39198", + "protein_translation": "MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK", + "protein_translation_length": 1247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004121" + ], + [ + "gene_synonym", + "ECK1219" + ], + [ + "gene_synonym", + "EcoGene:EG10639" + ], + [ + "gene_synonym", + "GI:16129188" + ], + [ + "gene_synonym", + "GeneID:945780" + ], + [ + "gene_synonym", + "JW1216" + ], + [ + "gene_synonym", + "NP_415743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11349" + ], + [ + "gene_synonym", + "b1225" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "narH" + ] + ], + "dna_sequence": "ATGAAAATTCGTTCACAAGTCGGCATGGTGCTGAATCTCGATAAGTGCATCGGCTGCCACACCTGTTCAGTTACCTGTAAAAACGTCTGGACCAGCCGTGAAGGCGTGGAATATGCGTGGTTCAACAACGTGGAAACCAAGCCGGGCCAGGGCTTCCCGACTGACTGGGAAAACCAGGAAAAATACAAAGGCGGCTGGATCCGTAAAATCAACGGCAAACTGCAGCCGCGCATGGGTAACCGTGCCATGCTGCTGGGTAAAATCTTCGCTAACCCGCATCTGCCGGGGATCGACGATTATTACGAGCCGTTCGATTTTGACTATCAGAACCTGCATACCGCGCCGGAAGGCAGCAAATCGCAGCCGATTGCCCGTCCGCGTTCGCTGATTACCGGGGAACGGATGGCGAAAATCGAAAAAGGGCCGAACTGGGAAGATGACCTGGGCGGTGAGTTTGACAAACTGGCGAAAGACAAGAACTTCGACAACATCCAGAAGGCGATGTATAGCCAGTTCGAAAACACCTTCATGATGTATTTGCCGCGCCTGTGCGAACACTGCCTGAACCCGGCATGTGTGGCGACCTGCCCGAGCGGTGCGATTTACAAGCGTGAAGAAGATGGCATCGTCCTGATCGACCAGGATAAATGCCGTGGCTGGCGTATGTGCATCACTGGATGCCCGTACAAAAAAATCTACTTCAACTGGAAGAGCGGTAAGTCTGAGAAGTGCATCTTCTGCTATCCGCGTATTGAAGCGGGTCAGCCGACCGTGTGCTCAGAAACCTGTGTCGGTCGTATCCGTTATCTTGGCGTGCTGTTGTACGATGCCGACGCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGATCCGAACGATCCGAAAGTCATCGAGCAGGCGATTAAAGACGGTATTCCGCTGAGCGTTATTGAAGCCGCACAGCAGTCGCCGGTTTATAAAATGGCAATGGAATGGAAACTGGCGCTGCCGCTGCATCCGGAATATCGCACACTGCCGATGGTCTGGTACGTGCCGCCTCTGTCTCCGATTCAGTCTGCAGCAGACGCGGGTGAGCTGGGTAGCAACGGCATTCTGCCAGACGTCGAAAGCCTGCGTATTCCGGTACAGTATCTGGCGAATCTGCTGACCGCCGGTGATACCAAACCGGTACTGCGCGCACTGAAACGTATGCTGGCGATGCGTCATTACAAACGTGCTGAAACCGTTGACGGTAAAGTTGATACCCGTGCGCTGGAAGAGGTCGGTCTGACCGAAGCCCAGGCACAGGAGATGTACCGTTATCTGGCGATTGCTAACTACGAAGATCGCTTTGTGGTGCCGAGTAGTCATCGTGAACTGGCACGGGAAGCCTTCCCGGAGAAAAATGGCTGCGGCTTTACCTTTGGTGATGGCTGCCACGGTTCAGATACCAAATTCAATCTGTTCAACAGCCGTCGTATCGATGCCATCGATGTGACCAGCAAAACGGAGCCGCATCCATGA", + "dna_sequence_length": 1539, + "functions": [ + "nitrate reductase 1, beta (Fe-S) subunit" + ], + "id": "CDS_1209", + "location": [ + [ + "NC_000913", + 1283604, + "+", + 1539 + ] + ], + "md5": "1443d174ec9ec78f998cd786ca848b90", + "parent_gene": "", + "protein_md5": "af13e9f3b7209a88b110d3da50d6671d", + "protein_translation": "MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLDVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004123" + ], + [ + "gene_synonym", + "ECK1220" + ], + [ + "gene_synonym", + "EcoGene:EG10641" + ], + [ + "gene_synonym", + "GI:16129189" + ], + [ + "gene_synonym", + "GeneID:945807" + ], + [ + "gene_synonym", + "JW1217" + ], + [ + "gene_synonym", + "NP_415744.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF26" + ], + [ + "gene_synonym", + "b1226" + ], + [ + "gene_synonym", + "narJ" + ] + ], + "dna_sequence": "ATGATCGAACTCGTGATTGTATCGCGTCTCCTTGAATATCCGGATGCTGCCTTATGGCAGCATCAACAAGAGATGTTTGAGGCGATTGCCGCGTCGAAAAATCTGCCAAAAGAGGATGCCCATGCGCTGGGCATTTTCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGACCTGCTGGCGCAGTACGAGCAGCACGGCTTGCAGTTAAACAGCCGCGAATTGCCGGACCATCTGCCGCTGTATCTGGAGTACCTGGCGCAGCTGCCGCAAAGCGAAGCCGTGGAAGGTTTGAAAGATATCGCGCCGATTCTGGCATTGCTGAGCGCGCGTCTGCAACAGCGTGAAAGCCGTTATGCCGTGCTGTTTGATCTGCTGCTGAAACTGGCGAATACCGCTATCGACAGCGACAAAGTGGCGGAAAAAATTGCCGACGAAGCGCGCGATGATACGCCGCAGGCGCTGGATGCTGTCTGGGAAGAAGAGCAGGTTAAATTCTTTGCTGACAAAGGCTGCGGTGATTCAGCAATCACTGCGCATCAGCGTCGCTTTGCCGGTGCCGTCGCGCCGCAATATCTGAATATCACCACCGGAGGACAGCACTAA", + "dna_sequence_length": 711, + "functions": [ + "molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1" + ], + "id": "CDS_1210", + "location": [ + [ + "NC_000913", + 1285139, + "+", + 711 + ] + ], + "md5": "a09d9b21e597b61dda0f3bab055ccb33", + "parent_gene": "", + "protein_md5": "ea52a1b4afe3177f23c6cbec9ceccb7d", + "protein_translation": "MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLPKEDAHALGIFLRDLTTMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEYLAQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVLFDLLLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004125" + ], + [ + "gene_synonym", + "ECK1221" + ], + [ + "gene_synonym", + "EcoGene:EG10640" + ], + [ + "gene_synonym", + "GI:16129190" + ], + [ + "gene_synonym", + "GeneID:945808" + ], + [ + "gene_synonym", + "JW1218" + ], + [ + "gene_synonym", + "NP_415745.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11350" + ], + [ + "gene_synonym", + "b1227" + ], + [ + "gene_synonym", + "chlI" + ], + [ + "gene_synonym", + "narI" + ] + ], + "dna_sequence": "ATGCAATTCCTGAATATGTTCTTCTTTGATATCTACCCGTACATAGCCGGGGCGGTCTTCCTGATTGGTAGCTGGCTGCGTTATGACTACGGGCAGTACACCTGGCGCGCGGCGTCCAGCCAGATGCTGGATCGCAAAGGGATGAACCTGGCGTCGAACCTGTTCCATATCGGGATTCTGGGGATTTTTGTCGGTCACTTCTTCGGTATGCTGACGCCGCACTGGATGTATGAAGCCTGGCTGCCGATTGAAGTGAAACAGAAAATGGCAATGTTTGCTGGTGGTGCCAGCGGCGTGCTGTGTCTGATTGGCGGCGTGCTGTTGCTGAAACGTCGTCTGTTCAGCCCACGCGTGCGTGCAACCACTACCGGAGCGGATATCCTGATCCTGTCGCTGCTCGTTATCCAGTGCGCGCTGGGCCTGTTGACCATTCCGTTCTCCGCTCAGCATATGGACGGTAGCGAGATGATGAAACTGGTTGGCTGGGCGCAGTCGGTGGTGACCTTCCACGGTGGCGCTTCTCAACACCTCGATGGTGTGGCGTTTATCTTCCGTCTGCACCTGGTGCTGGGGATGACGTTATTCCTGCTGTTCCCGTTCTCGCGTCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAA", + "dna_sequence_length": 678, + "functions": [ + "nitrate reductase 1, gamma (cytochrome b(NR)) subunit" + ], + "id": "CDS_1211", + "location": [ + [ + "NC_000913", + 1285849, + "+", + 678 + ] + ], + "md5": "2893a694495cdf24f4fb2b4221f0a18c", + "parent_gene": "", + "protein_md5": "33cbdb10e3ac7dca7844d1fc5907a9dd", + "protein_translation": "MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLIHIWSVPVEYLTRKYQLVRARH", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004131" + ], + [ + "gene_synonym", + "ECK1224" + ], + [ + "gene_synonym", + "EcoGene:EG11016" + ], + [ + "gene_synonym", + "GI:145698249" + ], + [ + "gene_synonym", + "GeneID:946224" + ], + [ + "gene_synonym", + "JW1219" + ], + [ + "gene_synonym", + "NP_415747.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02338" + ], + [ + "gene_synonym", + "b1229" + ], + [ + "gene_synonym", + "tpr" + ] + ], + "dna_sequence": "ATGAGAAGCTTCGACCAAGGTTCGACTCGAGCGCCAGCGAGAGAGCGTTGCCGCAGGCAACGACCCGAAGGGCGAAGCGCGCAGCGCTGA", + "dna_sequence_length": 90, + "functions": [ + "protamine-like protein" + ], + "id": "CDS_1212", + "location": [ + [ + "NC_000913", + 1287176, + "-", + 90 + ] + ], + "md5": "74e6ce8822d2b4a6853691bc08ed751c", + "parent_gene": "", + "protein_md5": "93af467cefb8446a31e880287294db33", + "protein_translation": "MRSFDQGSTRAPARERCRRQRPEGRSAQR", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004138" + ], + [ + "gene_synonym", + "ECK1227" + ], + [ + "gene_synonym", + "EcoGene:EG11819" + ], + [ + "gene_synonym", + "GI:16129193" + ], + [ + "gene_synonym", + "GeneID:945827" + ], + [ + "gene_synonym", + "JW1220" + ], + [ + "gene_synonym", + "NP_415748.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37051" + ], + [ + "gene_synonym", + "b1232" + ], + [ + "gene_synonym", + "purU" + ], + [ + "gene_synonym", + "tgs" + ], + [ + "gene_synonym", + "ychI" + ] + ], + "dna_sequence": "ATGCATTCACTCCAACGTAAAGTTCTGCGTACTATTTGTCCGGACCAAAAAGGTCTGATCGCACGTATTACCAATATTTGCTACAAGCACGAGTTAAATATCGTACAGAACAATGAATTTGTTGATCACCGTACCGGGCGCTTTTTTATGCGCACGGAACTGGAAGGGATTTTTAATGATTCCACCCTGCTGGCGGATCTCGATAGCGCATTGCCAGAAGGCTCCGTGCGTGAGCTGAATCCTGCCGGTCGTCGCCGGATAGTGATTCTGGTCACTAAAGAAGCGCATTGCCTTGGCGATTTGTTGATGAAAGCCAATTACGGCGGCCTGGATGTCGAAATCGCGGCAGTTATTGGTAACCACGATACTTTACGTTCTCTGGTTGAGCGTTTTGATATTCCGTTTGAGCTGGTAAGCCATGAAGGGTTAACCCGCAACGAGCACGATCAAAAGATGGCGGATGCCATTGATGCTTATCAACCTGACTACGTGGTGCTGGCGAAGTATATGCGGGTATTAACGCCGGAATTTGTGGCACGCTTCCCGAATAAGATCATCAATATTCACCATTCATTCCTGCCAGCGTTTATTGGCGCACGTCCTTATCACCAGGCCTATGAACGTGGTGTGAAGATTATTGGCGCAACCGCTCACTATGTGAATGACAATCTGGACGAAGGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGGTCGTGACGTCGAGAAAAACGTCTTAAGTCGTGCACTATACAAAGTACTGGCACAGCGCGTCTTTGTTTACGGTAATCGAACGATTATTCTTTAA", + "dna_sequence_length": 843, + "functions": [ + "formyltetrahydrofolate hydrolase" + ], + "id": "CDS_1213", + "location": [ + [ + "NC_000913", + 1288624, + "-", + 843 + ] + ], + "md5": "ad18a8053ab90eddff151f57aaaadd72", + "parent_gene": "", + "protein_md5": "e20825855d949f703ae9f801d1264938", + "protein_translation": "MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004140" + ], + [ + "gene_synonym", + "ECK1228" + ], + [ + "gene_synonym", + "EcoGene:EG12119" + ], + [ + "gene_synonym", + "GI:16129194" + ], + [ + "gene_synonym", + "GeneID:945828" + ], + [ + "gene_synonym", + "JW1221" + ], + [ + "gene_synonym", + "NP_415749.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37052" + ], + [ + "gene_synonym", + "b1233" + ], + [ + "gene_synonym", + "ychJ" + ] + ], + "dna_sequence": "GTGTCTCAGCTTTGTCCCTGTGGTAGTGCTGTCGAGTATAGCCTATGTTGCCACCCTTATGTGTCTGGTGAAAAGGTTGCACCTGATCCAGAACATCTCATGCGTTCGCGTTACTGCGCTTTTGTGATGCAAGACGCAGATTATTTAATAAAGACCTGGCATCCCTCTTGTGGAGCAGCGGCGTTACGTGCCGAATTGATGGCCGGATTTGCGCATACTGAATGGTTGGGATTGACCGTATTTGAACATTGTTGGCAGGACGCCGACAATATCGGATTTGTCAGTTTTGTTGCTCGATTTACCGAAGGTGGTAAAACAGGTGCAATAATTGAACGTTCGCGATTTTTGAAAGAAAACGGTCAATGGTACTATATTGACGGTACACGTCCGCAGTTTGGTCGCAACGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA", + "dna_sequence_length": 459, + "functions": [ + "UPF0225 family protein" + ], + "id": "CDS_1214", + "location": [ + [ + "NC_000913", + 1289132, + "-", + 459 + ] + ], + "md5": "0f607b2d05ca0bbd607e0d62afa7600a", + "parent_gene": "", + "protein_md5": "c837cec7ee838ac530183a98fe374f38", + "protein_translation": "MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004144" + ], + [ + "gene_synonym", + "ECK1229" + ], + [ + "gene_synonym", + "EcoGene:EG12120" + ], + [ + "gene_synonym", + "GI:226524709" + ], + [ + "gene_synonym", + "GeneID:945725" + ], + [ + "gene_synonym", + "JW1222" + ], + [ + "gene_synonym", + "NP_415750.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR0" + ], + [ + "gene_synonym", + "b1234" + ], + [ + "gene_synonym", + "rssA" + ], + [ + "gene_synonym", + "ychK" + ] + ], + "dna_sequence": "ATGAGAAAGATAAAAATAGGGCTGGCGCTGGGATCTGGCGCGGCGAGAGGTTGGTCGCATATTGGCGTTATTAATGCGCTAAAAAAAGTGGGTATTGAAATTGATATCGTTGCAGGATGTTCAATTGGTTCGCTGGTGGGCGCTGCCTATGCATGCGATCGATTATCTGCGCTGGAAGATTGGGTGACCTCTTTCAGTTATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATCTCCATCTTGCTATTCGCGCATCATGCAGTATTCCAGGACTCATGGCACCTGTTGCACATAACGGCTACTGGCTGGTTGATGGAGCAGTCGTTAACCCAATTCCTATTTCCCTCACGCGTGCATTGGGGGCTGATATTGTGATAGCGGTTGACCTGCAGCACGATGCTCATTTGATGCAACAAGATTTGCTCTCCTTTAATGTCAGTGAAGAAAATAGCGAGAATGGTGATTCTCTGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACAGAGATTATGACCACTTCTATCCAGGTGCTGGAGAACCGCCTTAAAAGGAACCGCATGGCAGGTGATCCGCCCGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACGCTGCCATTGCGGCCGGACAGCTGGCAGTGGAAAGGAAAATGGACGAACTTTTGCCGTTGGTACGCACCAACATTTGA", + "dna_sequence_length": 906, + "functions": [ + "putative patatin-like family phospholipase" + ], + "id": "CDS_1215", + "location": [ + [ + "NC_000913", + 1289245, + "+", + 906 + ] + ], + "md5": "2374f66aae18e7b30c6b3d432566a672", + "parent_gene": "", + "protein_md5": "7eacaaa70e2e9edb3d9724d5b112c85b", + "protein_translation": "MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004147" + ], + [ + "gene_synonym", + "ECK1230" + ], + [ + "gene_synonym", + "EcoGene:EG12121" + ], + [ + "gene_synonym", + "GI:16129196" + ], + [ + "gene_synonym", + "GeneID:945855" + ], + [ + "gene_synonym", + "JW1223" + ], + [ + "gene_synonym", + "NP_415751.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEV1" + ], + [ + "gene_synonym", + "b1235" + ], + [ + "gene_synonym", + "hnr" + ], + [ + "gene_synonym", + "mviA" + ], + [ + "gene_synonym", + "rssB" + ], + [ + "gene_synonym", + "sprE" + ], + [ + "gene_synonym", + "verA" + ], + [ + "gene_synonym", + "ychL" + ] + ], + "dna_sequence": "ATGACGCAGCCATTGGTCGGAAAACAGATTCTCATTGTTGAAGATGAGCAGGTATTTCGCTCGCTTCTGGATTCATGGTTTTCCTCATTGGGAGCGACAACGGTACTGGCGGCTGATGGGGTGGATGCCCTTGAGTTGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGTCTCTATCCCAGCATGTTTAATTCGCGCGTTGAGGAAGAGGAAAGGCTTTTTCGCGACTGGGATGCAATGGTTGATAACCCTGCCGCAGCGGCGAAATTATTACAGGAACTACAACCGCCGGTTCAGCAGGTGATTTCCCATTGCCGGGTTAATTATCGTCAATTGGTTGCCGCGGACAAACCCGGCCTGGTGCTTGATATTGCCGCACTTTCGGAAAACGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGA", + "dna_sequence_length": 1014, + "functions": [ + "PcnB-degradosome interaction factor", + "response regulator" + ], + "id": "CDS_1216", + "location": [ + [ + "NC_000913", + 1290242, + "+", + 1014 + ] + ], + "md5": "072b6cb2989729efe34ebfbfa3e367a9", + "parent_gene": "", + "protein_md5": "fca79e291204297a9c2134d6157ee2b0", + "protein_translation": "MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004150" + ], + [ + "gene_synonym", + "ECK1231" + ], + [ + "gene_synonym", + "EcoGene:EG11319" + ], + [ + "gene_synonym", + "GI:16129197" + ], + [ + "gene_synonym", + "GeneID:945730" + ], + [ + "gene_synonym", + "JW1224" + ], + [ + "gene_synonym", + "NP_415752.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEP3" + ], + [ + "gene_synonym", + "b1236" + ], + [ + "gene_synonym", + "galU" + ], + [ + "gene_synonym", + "verA" + ], + [ + "gene_synonym", + "ychD" + ] + ], + "dna_sequence": "ATGGCTGCCATTAATACGAAAGTCAAAAAAGCCGTTATCCCCGTTGCGGGATTAGGAACCAGGATGTTGCCGGCGACGAAAGCCATCCCGAAAGAGATGCTGCCACTTGTCGATAAGCCATTAATTCAATACGTCGTGAATGAATGTATTGCGGCTGGCATTACTGAAATTGTGCTGGTTACACACTCATCTAAAAACTCTATTGAAAACCACTTTGATACCAGTTTTGAACTGGAAGCAATGCTGGAAAAACGTGTAAAACGTCAACTGCTTGATGAAGTGCAGTCTATTTGTCCACCGCACGTGACTATTATGCAAGTTCGTCAGGGTCTGGCGAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGGGTCATAGCCAGATCATGGTTGAACCGGTTGCTGATGTGACCGCATATGGCGTTGTGGATTGCAAAGGCGTTGAATTAGCGCCGGGTGAAAGCGTACCGATGGTTGGTGTGGTAGAAAAACCGAAAGCGGATGTTGCGCCGTCTAATCTCGCTATTGTGGGTCGTTACGTACTTAGCGCGGATATTTGGCCGTTGCTGGCAAAAACCCCTCCGGGAGCTGGTGATGAAATTCAGCTCACCGACGCAATTGATATGCTGATCGAAAAAGAAACGGTGGAAGCCTATCATATGAAAGGGAAGAGCCATGACTGCGGTAATAAATTAGGTTACATGCAGGCCTTCGTTGAATACGGTATTCGTCATAACACCCTTGGCACGGAATTTAAAGCCTGGCTTGAAGAAGAGATGGGCATTAAGAAGTAA", + "dna_sequence_length": 909, + "functions": [ + "glucose-1-phosphate uridylyltransferase" + ], + "id": "CDS_1217", + "location": [ + [ + "NC_000913", + 1291457, + "+", + 909 + ] + ], + "md5": "26e6c27b2b1a75844eb1e39b33f1ce81", + "parent_gene": "", + "protein_md5": "0b0bf4f1305f9216153bfac86a8062a8", + "protein_translation": "MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEMGIKK", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004152" + ], + [ + "gene_synonym", + "B1" + ], + [ + "gene_synonym", + "ECK1232" + ], + [ + "gene_synonym", + "EcoGene:EG10457" + ], + [ + "gene_synonym", + "GI:16129198" + ], + [ + "gene_synonym", + "GeneID:945829" + ], + [ + "gene_synonym", + "H1" + ], + [ + "gene_synonym", + "JW1225" + ], + [ + "gene_synonym", + "NP_415753.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACF8" + ], + [ + "gene_synonym", + "b1237" + ], + [ + "gene_synonym", + "bglY" + ], + [ + "gene_synonym", + "cur" + ], + [ + "gene_synonym", + "drc" + ], + [ + "gene_synonym", + "drdX" + ], + [ + "gene_synonym", + "drs" + ], + [ + "gene_synonym", + "fimG" + ], + [ + "gene_synonym", + "hns" + ], + [ + "gene_synonym", + "hnsA" + ], + [ + "gene_synonym", + "irk" + ], + [ + "gene_synonym", + "msyA" + ], + [ + "gene_synonym", + "osmZ" + ], + [ + "gene_synonym", + "pilG" + ], + [ + "gene_synonym", + "topS" + ], + [ + "gene_synonym", + "topX" + ], + [ + "gene_synonym", + "verA" + ], + [ + "gene_synonym", + "virR" + ] + ], + "dna_sequence": "ATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGTGCGCAGGCAAGAGAATGTACACTTGAAACGCTGGAAGAAATGCTGGAAAAATTAGAAGTTGTTGTTAACGAACGTCGCGAAGAAGAAAGCGCGGCTGCTGCTGAAGTTGAAGAGCGCACTCGTAAACTGCAGCAATATCGCGAAATGCTGATCGCTGACGGTATTGACCCGAACGAACTGCTGAATAGCCTTGCTGCCGTTAAATCTGGCACCAAAGCTAAACGTGCTCAGCGTCCGGCAAAATATAGCTACGTTGACGAAAACGGCGAAACTAAAACCTGGACTGGCCAAGGCCGTACTCCAGCTGTAATCAAAAAAGCAATGGATGAGCAAGGTAAATCCCTCGACGATTTCCTGATCAAGCAATAA", + "dna_sequence_length": 414, + "functions": [ + "global DNA-binding transcriptional dual regulator H-NS" + ], + "id": "CDS_1218", + "location": [ + [ + "NC_000913", + 1292922, + "-", + 414 + ] + ], + "md5": "94d475e607b31e241502b9c1820513de", + "parent_gene": "", + "protein_md5": "fdac5ebd57f1155340d7ac31bae488cd", + "protein_translation": "MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004157" + ], + [ + "gene_synonym", + "ECK1233" + ], + [ + "gene_synonym", + "EcoGene:EG10994" + ], + [ + "gene_synonym", + "GI:16129199" + ], + [ + "gene_synonym", + "GeneID:945834" + ], + [ + "gene_synonym", + "JW1226" + ], + [ + "gene_synonym", + "NP_415754.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23331" + ], + [ + "gene_synonym", + "b1238" + ], + [ + "gene_synonym", + "tdk" + ] + ], + "dna_sequence": "ATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACGGCAGAAATTGATGATCGCTTTGGTGCCGGGAAAGTCAGTTCGCGTATAGGTTTGTCATCGCCTGCAAAATTATTTAACCAAAATTCATCATTATTTGATGAGATTCGTGCGGAACATGAACAGCAGGCAATTCATTGCGTACTGGTTGATGAATGCCAGTTTTTAACCAGACAACAAGTATATGAATTATCGGAGGTTGTCGATCAACTCGATATACCCGTACTTTGTTATGGTTTACGTACCGATTTTCGAGGTGAATTATTTATTGGCAGCCAATACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGTGGTAATTGGTGGTAATGAACGATACGTTTCTGTATGCCGTAAACACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAA", + "dna_sequence_length": 618, + "functions": [ + "thymidine kinase/deoxyuridine kinase" + ], + "id": "CDS_1219", + "location": [ + [ + "NC_000913", + 1293527, + "+", + 618 + ] + ], + "md5": "1a5eeb088ced90943a3f90df47ad80ac", + "parent_gene": "", + "protein_md5": "5dfb8cec10b673adb722072f815ea2e4", + "protein_translation": "MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVSVCRKHYKEALQVDSLTAIQERHRHD", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004159" + ], + [ + "gene_synonym", + "ASAP:ABE-0004161" + ], + [ + "gene_synonym", + "ASAP:ABE-0285106" + ], + [ + "gene_synonym", + "ECK1234" + ], + [ + "gene_synonym", + "EcoGene:EG11611" + ], + [ + "gene_synonym", + "GeneID:4056037" + ], + [ + "gene_synonym", + "JW1227" + ], + [ + "gene_synonym", + "JW5883" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30192" + ], + [ + "gene_synonym", + "b4573" + ], + [ + "gene_synonym", + "insZ" + ], + [ + "gene_synonym", + "ychG" + ], + [ + "gene_synonym", + "ychR" + ] + ], + "dna_sequence": "ATGCCACTTCTCAATGATCTGCTCGATTTCAGTGACCATCCGCTTATGCCTCCGCCCTCTGCACAACTATTTGCAGAACACCTTCCCACCGAGTGGATACAACACTGCCTGACGCTTTCTGCTCATGCGACCGTTCGCCGCCGTCGTTTACCGGGGGACATGGTTATCTGGATGGTGGTGCAAAATGAGCCAATTACCGATGTTGTTCGCCGTCTGAACCTGAGCGCGGATGGCGAAGCGGGGATGAACCTGCTGGCCCGCAGCGCTGTCACCCAGGCGCGTCAGCGCGTGGGGGCCGCCCCAGTGGAATGGCTCTTCCGCCAGACCGCACAGGACAGGGGCGCGGAACGTTACCTGAAGGATGACTGGCACGGCCTGCAACTTTTTGCCATTGATGGCGCACAGTTCAGGACACCTGATAAACCCGAGCTGCGTGAATATTATGGGTCTGCCAACACATCCACTAAGCGGCAGAACGCCTACCCGGTTATGCGTCTGGTGGCCTTAATGAACCTGGGAAGTCACATTCTGCTGAATGCCGTGACCGCACCTTACCGGCAGAGCGAAACTGTGCTGGCCCACTCCATGCTCGCCACCATCCCGGATAACTCTATTACGTTGTTTGATAAACTTTTTTACAGCGAAGACCTGCTGCTGACGCTGAACCAGAAGGGTTGTAACCGCCACTGGCTACTGCCTGCGTGGAAGAATATCGCATCAGAAATGATAGAGCTGGGAAACACGGCGTCACCAGGGACCATCCCGAAACGACTGGAGCATCTTCGGGGTGCTCTGGAAGTGGTGTTCATAACAAAACGCCCCCGACCATCAAGGCCGAGGTCGGTTAAGATATCAAAAACCCGTTATCCTGTGAAACATAGTGCCGCTCCTCTTAAGTGA", + "dna_sequence_length": 900, + "id": "CDS_1220", + "location": [ + [ + "NC_000913", + 1295322, + "-", + 183 + ], + [ + "NC_000913", + 1295141, + "-", + 150 + ], + [ + "NC_000913", + 1294992, + "-", + 567 + ] + ], + "md5": "ac53f7e322ea10215709902967d3cb42", + "parent_gene": "", + "protein_md5": "3e71cf099e23dae9ea21f906e9dc5711", + "protein_translation": "MPLLNDLLDFSDHPLMPPPSAQLFAEHLPTEWIQHCLTLSAHATVRRRRLPGDMVIWMVVQNEPITDVVRRLNLSADGEAGMNLLARSAVTQARQRVGAAPVEWLFRQTAQDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTAPYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKNIASEMIELGNTASPGTIPKRLEHLRGALEVVFITKRPRPSRPRSVKISKTRYPVKHSAAPLK", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004164" + ], + [ + "gene_synonym", + "ECK1235" + ], + [ + "gene_synonym", + "EcoGene:EG10031" + ], + [ + "gene_synonym", + "GI:16129202" + ], + [ + "gene_synonym", + "GeneID:945837" + ], + [ + "gene_synonym", + "JW1228" + ], + [ + "gene_synonym", + "NP_415757.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Q7" + ], + [ + "gene_synonym", + "adhC" + ], + [ + "gene_synonym", + "adhE" + ], + [ + "gene_synonym", + "ana" + ], + [ + "gene_synonym", + "b1241" + ] + ], + "dna_sequence": "ATGGCTGTTACTAATGTCGCTGAACTTAACGCACTCGTAGAGCGTGTAAAAAAAGCCCAGCGTGAATATGCCAGTTTCACTCAAGAGCAAGTAGACAAAATCTTCCGCGCCGCCGCTCTGGCTGCTGCAGATGCTCGAATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTTGCTTCTGAATATATCTACAACGCCTATAAAGATGAAAAAACCTGTGGTGTTCTGTCTGAAGACGACACTTTTGGTACCATCACTATCGCTGAACCAATCGGTATTATTTGCGGTATCGTTCCGACCACTAACCCGACTTCAACTGCTATCTTCAAATCGCTGATCAGTCTGAAGACCCGTAACGCCATTATCTTCTCCCCGCACCCGCGTGCAAAAGATGCCACCAACAAAGCGGCTGATATCGTTCTGCAGGCTGCTATCGCTGCCGGTGCTCCGAAAGATCTGATCGGCTGGATCGATCAACCTTCTGTTGAACTGTCTAACGCACTGATGCACCACCCAGACATCAACCTGATCCTCGCGACTGGTGGTCCGGGCATGGTTAAAGCCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAAACTGCTGATATCAAACGTGCAGTTGCATCTGTACTGATGTCCAAAACCTTCGACAACGGCGTAATCTGTGCTTCTGAACAGTCTGTTGTTGTTGTTGACTCTGTTTATGACGCTGTACGTGAACGTTTTGCAACCCACGGCGGCTATCTGTTGCAGGGTAAAGAGCTGAAAGCTGTTCAGGATGTTATCCTGAAAAACGGTGCGCTGAACGCGGCTATCGTTGGTCAGCCAGCCTATAAAATTGCTGAACTGGCAGGCTTCTCTGTACCAGAAAACACCAAGATTCTGATCGGTGAAGTGACCGTTGTTGATGAAAGCGAACCGTTCGCACATGAAAAACTGTCCCCGACTCTGGCAATGTACCGCGCTAAAGATTTCGAAGACGCGGTAGAAAAAGCAGAGAAACTGGTTGCTATGGGCGGTATCGGTCATACCTCTTGCCTGTACACTGACCAGGATAACCAACCGGCTCGCGTTTCTTACTTCGGTCAGAAAATGAAAACGGCGCGTATCCTGATTAACACCCCAGCGTCTCAGGGTGGTATCGGTGACCTGTATAACTTCAAACTCGCACCTTCCCTGACTCTGGGTTGTGGTTCTTGGGGTGGTAACTCCATCTCTGAAAACGTTGGTCCGAAACACCTGATCAACAAGAAAACCGTTGCTAAGCGAGCTGAAAACATGTTGTGGCACAAACTTCCGAAATCTATCTACTTCCGCCGTGGCTCCCTGCCAATCGCGCTGGATGAAGTGATTACTGATGGCCACAAACGTGCGCTCATCGTGACTGACCGCTTCCTGTTCAACAATGGTTATGCTGATCAGATCACTTCCGTACTGAAAGCAGCAGGCGTTGAAACTGAAGTCTTCTTCGAAGTAGAAGCGGACCCGACCCTGAGCATCGTTCGTAAAGGTGCAGAACTGGCAAACTCCTTCAAACCAGACGTGATTATCGCGCTGGGTGGTGGTTCCCCGATGGACGCCGCGAAGATCATGTGGGTTATGTACGAACATCCGGAAACTCACTTCGAAGAGCTGGCGCTGCGCTTTATGGATATCCGTAAACGTATCTACAAGTTCCCGAAAATGGGCGTGAAAGCGAAAATGATCGCTGTCACCACCACTTCTGGTACAGGTTCTGAAGTCACTCCGTTTGCGGTTGTAACTGACGACGCTACTGGTCAGAAATATCCGCTGGCAGACTATGCGCTGACTCCGGATATGGCGATTGTCGACGCCAACCTGGTTATGGACATGCCGAAGTCCCTGTGTGCTTTCGGTGGTCTGGACGCAGTAACTCACGCCATGGAAGCTTATGTTTCTGTACTGGCATCTGAGTTCTCTGATGGTCAGGCTCTGCAGGCACTGAAACTGCTGAAAGAATATCTGCCAGCGTCCTACCACGAAGGGTCTAAAAATCCGGTAGCGCGTGAACGTGTTCACAGTGCAGCGACTATCGCGGGTATCGCGTTTGCGAACGCCTTCCTGGGTGTATGTCACTCAATGGCGCACAAACTGGGTTCCCAGTTCCATATTCCGCACGGTCTGGCAAACGCCCTGCTGATTTGTAACGTTATTCGCTACAATGCGAACGACAACCCGACCAAGCAGACTGCATTCAGCCAGTATGACCGTCCGCAGGCTCGCCGTCGTTATGCTGAAATTGCCGACCACTTGGGTCTGAGCGCACCGGGCGACCGTACTGCTGCTAAGATCGAGAAACTGCTGGCATGGCTGGAAACGCTGAAAGCTGAACTGGGTATTCCGAAATCTATCCGTGAAGCTGGCGTTCAGGAAGCAGACTTCCTGGCGAACGTGGATAAACTGTCTGAAGATGCATTCGATGACCAGTGCACCGGCGCTAACCCGCGTTACCCGCTGATCTCCGAGCTGAAACAGATTCTGCTGGATACCTACTACGGTCGTGATTATGTAGAAGGTGAAACTGCAGCGAAGAAAGAAGCTGCTCCGGCTAAAGCTGAGAAAAAAGCGAAAAAATCCGCTTAA", + "dna_sequence_length": 2676, + "functions": [ + "fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase" + ], + "id": "CDS_1221", + "location": [ + [ + "NC_000913", + 1298121, + "-", + 2676 + ] + ], + "md5": "8a2a4f075568333e634e6907324ff253", + "parent_gene": "", + "protein_md5": "74428bf03d3c75c944ea0b2eb632701f", + "protein_translation": "MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQGKELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA", + "protein_translation_length": 891, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004168" + ], + [ + "gene_synonym", + "ECK1236" + ], + [ + "gene_synonym", + "EcoGene:EG11342" + ], + [ + "gene_synonym", + "GI:16129203" + ], + [ + "gene_synonym", + "GeneID:945836" + ], + [ + "gene_synonym", + "JW1229" + ], + [ + "gene_synonym", + "NP_415758.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25743" + ], + [ + "gene_synonym", + "b1242" + ], + [ + "gene_synonym", + "ychE" + ] + ], + "dna_sequence": "GTGATTCAGACCTTTTTTGATTTTCCCGTTTACTTCAAATTTTTCATCGGGTTATTTGCGCTGGTCAACCCGGTAGGGATTATTCCCGTCTTTATCAGCATGACCAGTTATCAGACAGCGGCAGCGCGAAACAAAACTAACCTTACAGCCAACCTGTCTGTGGCCATTATCTTGTGGATCTCGCTTTTTCTCGGCGACACGATTCTACAACTTTTTGGTATATCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTTGGGGATTGTTCCGCATGGCACCGTGGCTGGTACGGGTTTTACGCCAGACCGGCATCAACGTGATTACGCGTATTATGGGGCTATTGCTGATGGCATTGGGGATTGAATTTATCGTTACTGGTATTAAGGGGATTTTCCCCGGCCTGCTTAATTAA", + "dna_sequence_length": 648, + "functions": [ + "UPF0056 family inner membrane protein" + ], + "id": "CDS_1222", + "location": [ + [ + "NC_000913", + 1298598, + "+", + 648 + ] + ], + "md5": "f210e8cd219fbdd9c4099ef99d3f7b92", + "parent_gene": "", + "protein_md5": "dd86265da8cbbba869608551e89cf8e6", + "protein_translation": "MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004172" + ], + [ + "gene_synonym", + "ECK1237" + ], + [ + "gene_synonym", + "EcoGene:EG10674" + ], + [ + "gene_synonym", + "GI:16129204" + ], + [ + "gene_synonym", + "GeneID:945830" + ], + [ + "gene_synonym", + "JW1235" + ], + [ + "gene_synonym", + "NP_415759.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23843" + ], + [ + "gene_synonym", + "b1243" + ], + [ + "gene_synonym", + "oppA" + ] + ], + "dna_sequence": "ATGACCAACATCACCAAGAGAAGTTTAGTAGCAGCTGGCGTTCTGGCTGCGCTAATGGCAGGGAATGTCGCGCTGGCAGCTGATGTACCCGCAGGCGTCACACTGGCGGAAAAACAAACACTGGTACGTAACAATGGTTCAGAAGTTCAGTCATTAGATCCGCACAAAATTGAAGGTGTTCCGGAGTCTAATATCAGCCGAGACCTGTTTGAAGGCTTACTGGTCAGCGATCTTGACGGTCATCCAGCACCTGGCGTCGCTGAATCCTGGGATAATAAAGACGCGAAAGTCTGGACCTTCCATTTGCGTAAAGATGCGAAATGGTCTGATGGCACGCCAGTCACAGCACAAGACTTTGTGTATAGCTGGCAACGTTCTGTTGATCCGAACACTGCTTCTCCGTATGCCAGTTATCTGCAATATGGGCATATCGCCGGTATTGATGAAATTCTTGAAGGGAAAAAACCGATTACCGATCTCGGCGTGAAAGCTATTGATGATCACACATTAGAAGTCACCTTAAGTGAACCCGTTCCGTACTTCTATAAATTACTTGTTCACCCATCAACTTCACCGGTGCCAAAAGCCGCTATCGAGAAATTCGGCGAAAAATGGACCCAGCCTGGTAATATCGTCACCAACGGTGCCTATACCTTAAAAGATTGGGTCGTAAACGAACGAATCGTTCTTGAACGCAGCCCGACCTACTGGAACAACGCGAAAACCGTTATTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTGGTTAACCAGGAGTGGAAAACGTTCCTCGACACCCGTCACCAGGGTACTTTTGATGTGGCCCGTGCAGGCTGGTGTGCTGACTACAACGAACCAACTTCCTTCCTGAACACCATGCTTTCGAACAGCTCGATGAATACCGCGCATTATAAGAGCCCGGCCTTTGACAGCATTATGGCGGAAACGCTGAAAGTGACTGACGAGGCGCAGCGCACAGCTCTGTACACTAAAGCAGAACAACAGCTGGATAAGGATTCGGCCATTGTTCCTGTTTATTACTACGTGAATGCGCGTCTGGTGAAACCGTGGGTTGGTGGCTATACCGGCAAAGATCCGCTGGATAATACCTATACCCGGAATATGTACATTGTGAAGCACTAA", + "dna_sequence_length": 1632, + "functions": [ + "oligopeptide ABC transporter periplasmic binding protein" + ], + "id": "CDS_1223", + "location": [ + [ + "NC_000913", + 1301182, + "+", + 1632 + ] + ], + "md5": "c48bc3dd919fb045c138c4c6a6960e5f", + "parent_gene": "", + "protein_md5": "1182f19cd9cfb577f30dfd6f2ec5d4de", + "protein_translation": "MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH", + "protein_translation_length": 543, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004174" + ], + [ + "gene_synonym", + "ECK1238" + ], + [ + "gene_synonym", + "EcoGene:EG10675" + ], + [ + "gene_synonym", + "GI:16129205" + ], + [ + "gene_synonym", + "GeneID:945823" + ], + [ + "gene_synonym", + "JW1236" + ], + [ + "gene_synonym", + "NP_415760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFH2" + ], + [ + "gene_synonym", + "b1244" + ], + [ + "gene_synonym", + "oppB" + ], + [ + "gene_synonym", + "stkB" + ] + ], + "dna_sequence": "ATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACTATACCGTGATGGGGCTGGCAATGACCGGGGTTGTTATCCCCAGTTTTGTGGTTGCACCATTATTAGTCATGATATTTGCGATCATTTTGCATTGGCTGCCGGGCGGTGGCTGGAATGGTGGGGCGCTTAAATTCATGATATTGCCGATGGTGGCGTTGTCACTCGCTTATATCGCCAGTATTGCGCGTATTACCCGTGGCTCTATGATTGAAGTATTACACTCCAATTTTATTCGTACTGCCCGGGCGAAAGGGTTACCTATGCGGCGGATCATTTTACGTCACGCATTAAAACCTGCTCTGTTACCCGTGCTCTCTTATATGGGCCCCGCATTTGTCGGCATTATTACCGGTTCTATGGTTATCGAAACCATTTATGGTTTGCCGGGGATTGGACAACTGTTCGTTAATGGCGCATTGAACCGTGACTATTCCTTAGTGTTAAGCCTGACCATCCTGGTTGGTGCTTTAACCATTTTGTTTAATGCCATTGTCGATGTGCTATATGCGGTTATCGACCCGAAAATCCGTTACTGA", + "dna_sequence_length": 921, + "functions": [ + "oligopeptide ABC transporter permease" + ], + "id": "CDS_1224", + "location": [ + [ + "NC_000913", + 1302899, + "+", + 921 + ] + ], + "md5": "44a358810f049bdf3aa2081477f41080", + "parent_gene": "", + "protein_md5": "fb1b9639248c5e7e67eb5002d66c86e0", + "protein_translation": "MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004176" + ], + [ + "gene_synonym", + "ECK1239" + ], + [ + "gene_synonym", + "EcoGene:EG10676" + ], + [ + "gene_synonym", + "GI:16129206" + ], + [ + "gene_synonym", + "GeneID:945810" + ], + [ + "gene_synonym", + "JW1237" + ], + [ + "gene_synonym", + "NP_415761.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFH6" + ], + [ + "gene_synonym", + "b1245" + ], + [ + "gene_synonym", + "oppC" + ], + [ + "gene_synonym", + "stkB" + ] + ], + "dna_sequence": "ATGATGTTAAGTAAGAAAAACAGCGAGACGCTGGAAAATTTCAGTGAAAAGCTGGAGGTCGAAGGGCGCAGCTTGTGGCAGGACGCACGTCGACGTTTTATGCATAACCGTGCGGCGGTTGCCAGTCTGATAGTGCTGGTGCTGATCGCGTTATTTGTAATCCTGGCACCGATGCTTTCCCAGTTTGCCTATGACGATACTGACTGGGCGATGATGTCCAGCGCCCCGGATATGGAGTCCGGTCACTACTTTGGTACTGACTCATCCGGTCGCGACCTGCTTGTGCGCGTTGCGATTGGCGGGCGTATCTCACTCATGGTCGGTGTTGCTGCGGCACTGGTGGCTGTGGTCGTCGGGACACTTTATGGTTCGCTTTCCGGTTATCTGGGCGGTAAAGTGGATTCGGTAATGATGCGTCTGCTGGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGAAGCGCAAAGAGTTTATTGAGGCGGCACAAGTTGGCGGTGTATCGACATCGGGCATTGTTATTCGCCACATTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTTGAATCTTTCCTTAGCTTCCTGGGGTTGGGTACGCAAGAGCCGTTAAGCAGCTGGGGTGCATTGCTGAGTGATGGCGCGAACTCGATGGAAGTCTCTCCATGGTTATTGTTGTTCCCAGCGGGATTCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAA", + "dna_sequence_length": 909, + "functions": [ + "oligopeptide ABC transporter permease" + ], + "id": "CDS_1225", + "location": [ + [ + "NC_000913", + 1303834, + "+", + 909 + ] + ], + "md5": "2592125b1005d55eacf2f4fbaf09699a", + "parent_gene": "", + "protein_md5": "14f679304a75856c58991218e268f535", + "protein_translation": "MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004178" + ], + [ + "gene_synonym", + "ECK1240" + ], + [ + "gene_synonym", + "EcoGene:EG10677" + ], + [ + "gene_synonym", + "GI:49176090" + ], + [ + "gene_synonym", + "GeneID:945802" + ], + [ + "gene_synonym", + "JW1238" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76027" + ], + [ + "gene_synonym", + "YP_025300.1" + ], + [ + "gene_synonym", + "b1246" + ], + [ + "gene_synonym", + "oppD" + ] + ], + "dna_sequence": "ATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCGGACGGCGACGTCACGGCGGTCAATGATTTGAATTTTTCCCTACGTGCCGGAGAAACGCTGGGTATTGTAGGTGAGTCTGGTTCGGGTAAATCGCAAACTGCATTTGCGTTGATGGGCCTGTTGGCTGCCAACGGACGTATTGGCGGATCGGCAACCTTCAATGGGCGTGAAATCCTCAATTTGCCAGAGCATGAACTCAATAAACTGCGCGCTGAACAAATCTCAATGATTTTTCAGGACCCAATGACTTCGTTGAATCCCTATATGCGCGTCGGTGAGCAGTTGATGGAAGTGCTGATGCTGCATAAGAACATGAGCAAAGCTGAGGCGTTTGAAGAGTCGGTGCGGATGCTCGATGCGGTAAAAATGCCGGAAGCGCGTAAACGCATGAAAATGTACCCGCACGAATTTTCTGGCGGCATGCGTCAGCGAGTCATGATTGCGATGGCCTTGTTATGTCGACCTAAGCTGCTGATTGCGGATGAACCAACAACTGCGCTGGACGTCACCGTACAGGCGCAGATCATGACGCTATTAAATGAACTGAAGCGGGAATTTAATACCGCCATCATTATGATCACCCACGATCTTGTCGTGGTGGCGGGGATCTGCGACAAAGTGCTGGTAATGTACGCCGGGCGCACGATGGAATATGGCAACGCGCGCGATGTCTTTTATCAACCCGTTCATCCTTATTCTATCGGTTTGCTCAACGCGGTGCCGCGTCTCGATGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGTTGTCCGCATGCGATGGAAATTTGTAGTAGCGCACCGCCGCTGGAAGAGTTTACGCCTGGCCGTCTGCGTGCTTGCTTTAAACCGGTGGAGGAACTGTTATGA", + "dna_sequence_length": 1014, + "functions": [ + "oligopeptide ABC transporter ATPase" + ], + "id": "CDS_1226", + "location": [ + [ + "NC_000913", + 1304754, + "+", + 1014 + ] + ], + "md5": "27381f35212927d62ca4f5f952ccbd88", + "parent_gene": "", + "protein_md5": "af66c2f2e37777f503b3153862ac6a07", + "protein_translation": "MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004182" + ], + [ + "gene_synonym", + "ECK1241" + ], + [ + "gene_synonym", + "EcoGene:EG10678" + ], + [ + "gene_synonym", + "GI:16129208" + ], + [ + "gene_synonym", + "GeneID:945818" + ], + [ + "gene_synonym", + "JW1239" + ], + [ + "gene_synonym", + "NP_415763.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77737" + ], + [ + "gene_synonym", + "b1247" + ], + [ + "gene_synonym", + "oppF" + ] + ], + "dna_sequence": "ATGAATGCTGTAACTGAAGGAAGAAAAGTCCTCCTTGAAATCGCCGATCTTAAAGTGCACTTTGAAATCAAAGATGGCAAACAGTGGTTCTGGCAACCGCCGAAAACGCTCAAAGCCGTCGATGGTGTCACTCTTCGCCTGTATGAAGGGGAAACATTAGGTGTGGTAGGGGAATCGGGATGCGGTAAGTCCACCTTTGCTCGCGCCATCATCGGTTTGGTCAAGGCGACCGACGGTCATGTTGCCTGGTTAGGTAAAGAGTTGCTGGGCATGAAACCCGATGAATGGCGTGCCGTTCGCAGTGATATTCAGATGATTTTCCAGGATCCGTTGGCATCGCTAAACCCGCGTATGACCATCGGCGAGATCATCGCTGAACCACTGCGTACTTATCATCCGAAAATGTCACGCCAGGAAGTTCGCGAGCGCGTGAAGGCGATGATGCTGAAAGTCGGGTTATTGCCTAACCTGATTAACCGCTATCCGCATGAGTTCTCTGGTGGGCAGTGCCAGCGTATCGGGATTGCGCGTGCTCTTATTCTTGAACCGAAGCTGATTATCTGTGATGAGCCGGTGTCGGCGCTGGACGTGTCAATTCAGGCACAGGTGGTCAACCTGCTCCAGCAATTGCAACGTGAGATGGGATTGTCATTAATTTTTATCGCTCATGACCTGGCCGTGGTAAAACACATTTCCGATCGTGTGTTGGTGATGTATCTCGGCCATGCGGTAGAACTGGGGACCTATGATGAGGTCTACCACAATCCACTACATCCTTACACCAGGGCATTGATGTCGGCAGTCCCCATACCTGATCCGGATCTGGAGAAGAACAAAACCATCCAGTTACTGGAAGGGGAATTACCGTCGCCGATCAACCCGCCTTCCGGTTGTGTTTTCCGTACCCGTTGCCCGATTGCCGGTCCAGAGTGCGCCAAAACACGTCCTGTTCTGGAGGGGAGTTTCAGACACTCCGTTTCTTGCCTGAAAGTCGATCCGCTTTAA", + "dna_sequence_length": 1005, + "functions": [ + "oligopeptide ABC transporter ATPase" + ], + "id": "CDS_1227", + "location": [ + [ + "NC_000913", + 1305764, + "+", + 1005 + ] + ], + "md5": "eeb0feaef37b3a2390617890bb9c0549", + "parent_gene": "", + "protein_md5": "00e7ede67acdbbe25a5356620debb625", + "protein_translation": "MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHSVSCLKVDPL", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004184" + ], + [ + "gene_synonym", + "ECK1242" + ], + [ + "gene_synonym", + "EcoGene:EG14256" + ], + [ + "gene_synonym", + "GI:90111236" + ], + [ + "gene_synonym", + "GeneID:945819" + ], + [ + "gene_synonym", + "JW1240" + ], + [ + "gene_synonym", + "NP_415764.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8L7" + ], + [ + "gene_synonym", + "b1248" + ], + [ + "gene_synonym", + "yciU" + ] + ], + "dna_sequence": "ATGGATATGGATCTAAACAATCGCCTGACTGAAGATGAAACGCTTGAACAGGCCTACGATATTTTTCTCGAACTGGCTGCCGACAATCTCGATCCAGCTGATGTTCTGCTGTTCAATCTTCAGTTTGAAGAGCGCGGCGGCGCGGAGTTATTCGATCCGGCGGAAGACTGGCAGGAACATGTTGATTTCGATTTGAACCCGGACTTTTTTGCCGAAGTGGTGATTGGTCTGGCGGACAGTGAAGATGGTGAAATCAACGATGTTTTTGCCCGCATTCTGTTATGCCGCGAAAAAGATCACAAACTTTGCCATATCATCTGGCGGGAATAA", + "dna_sequence_length": 330, + "functions": [ + "UPF0263 family protein" + ], + "id": "CDS_1228", + "location": [ + [ + "NC_000913", + 1307150, + "-", + 330 + ] + ], + "md5": "72b7e09f3ec550d031afcefc85859a64", + "parent_gene": "", + "protein_md5": "b7cf7c24afbdd6b77a39a81d93ce65da", + "protein_translation": "MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004186" + ], + [ + "gene_synonym", + "ECK1243" + ], + [ + "gene_synonym", + "EcoGene:EG11608" + ], + [ + "gene_synonym", + "GI:16129210" + ], + [ + "gene_synonym", + "GeneID:945821" + ], + [ + "gene_synonym", + "JW1241" + ], + [ + "gene_synonym", + "NP_415765.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6H8" + ], + [ + "gene_synonym", + "b1249" + ], + [ + "gene_synonym", + "cls" + ], + [ + "gene_synonym", + "clsA" + ], + [ + "gene_synonym", + "nov" + ], + [ + "gene_synonym", + "yciJ" + ] + ], + "dna_sequence": "ATGACAACCGTTTATACGTTGGTGAGTTGGTTGGCCATTCTGGGATACTGGTTGCTCATTGCAGGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTCTGCCGTTAGTCGGAATTATTGCCTATCTTGCCGTTGGCGAGCTCCATTTAGGCAAACGCCGCGCTGAGCGCGCCAGAGCGATGTGGCCTTCCACCGCAAAATGGCTTAACGACCTTAAAGCCTGTAAGCATATCTTCGCCGAAGAAAATAGCAGTGTCGCTGCGCCATTATTCAAGCTTTGCGAGCGTCGTCAGGGGATCGCTGGGGTCAAAGGGAATCAGCTACAACTGATGACCGAGTCAGATGATGTGATGCAGGCGTTAATCCGCGACATCCAGCTCGCGCGCCATAATATTGAGATGGTGTTTTATATCTGGCAGCCCGGCGGCATGGCGGACCAGGTGGCTGAATCATTAATGGCGGCTGCGCGACGCGGCATTCATTGCCGATTGATGCTCGACTCCGCCGGGAGTGTGGCTTTTTTCCGCAGCCCGTGGCCCGAGCTAATGCGTAATGCCGGTATTGAAGTGGTCGAAGCCTTAAAGGTCAATCTGATGCGTGTGTTTTTACGCCGTATGGACCTGCGCCAACATCGCAAGATGATCATGATCGATAATTACATCGCGTACACCGGCAGCATGAATATGGTCGATCCTCGCTACTTCAAACAAGATGCGGGCGTAGGGCAATGGATTGATCTGATGGCGCGTATGGAAGGCCCTATCGCCACCGCGATGGGGATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAATATTATGCCGTTTGAACAGGCCAGCGGTCACACCATTCACACAATTGCTTCTGGCCCCGGCTTTCCGGAAGATCTCATTCACCAGGCATTATTGACTGCGGCTTATTCGGCGCGTGAATATTTGATCATGACCACGCCCTACTTTGTGCCAAGCGATGATTTACTTCATGCGATTTGCACGGCGGCGCAGCGCGGGGTGGATGTCAGTATTATCCTTCCGCGAAAAAATGACTCGATGCTGGTCGGCTGGGCCAGTCGCGCATTCTTTACGGAACTGCTGGCTGCTGGGGTTAAAATTTATCAGTTTGAAGGCGGGTTACTGCATACCAAGAGCGTGCTGGTCGATGGCGAACTAAGTCTGGTTGGCACAGTTAACCTTGATATGCGTAGTCTGTGGCTAAATTTCGAGATTACCCTGGCAATCGACGATAAAGGTTTTGGTGCTGACCTCGCCGCCGTTCAGGACGATTATATTTCGCGTTCACGTCTGCTCGATGCCCGTTTATGGCTAAAACGTCCATTATGGCAACGTGTCGCCGAGCGACTGTTTTACTTCTTCAGTCCGTTGCTGTAA", + "dna_sequence_length": 1461, + "functions": [ + "cardiolipin synthase 1" + ], + "id": "CDS_1229", + "location": [ + [ + "NC_000913", + 1308645, + "-", + 1461 + ] + ], + "md5": "05cbf39bc11051d3b6ad90918a66d242", + "parent_gene": "", + "protein_md5": "6697711c6e912f9ee4c02921c93f6914", + "protein_translation": "MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL", + "protein_translation_length": 486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4405" + ], + [ + "gene_synonym", + "EcoGene:EG14393" + ], + [ + "gene_synonym", + "GI:145698250" + ], + [ + "gene_synonym", + "GeneID:5061502" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A613" + ], + [ + "gene_synonym", + "YP_001165316.1" + ], + [ + "gene_synonym", + "b4595" + ], + [ + "gene_synonym", + "yciY" + ] + ], + "dna_sequence": "ATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCACAGCATCAGGAAGTGCATTCTAAACAAACAGCGTAACTCGTTATTGTTTGCGATCTACAATATCTAA", + "dna_sequence_length": 174, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1230", + "location": [ + [ + "NC_000913", + 1308788, + "+", + 174 + ] + ], + "md5": "7dbf5a1be6a798b8a024be32b9400f1e", + "parent_gene": "", + "protein_md5": "67679133f34257a8d49b1a7b916dfa53", + "protein_translation": "MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILNKQRNSLLFAIYNI", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004189" + ], + [ + "gene_synonym", + "ECK1244" + ], + [ + "gene_synonym", + "EcoGene:EG11606" + ], + [ + "gene_synonym", + "GI:16129211" + ], + [ + "gene_synonym", + "GeneID:945841" + ], + [ + "gene_synonym", + "JW1242" + ], + [ + "gene_synonym", + "NP_415766.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31069" + ], + [ + "gene_synonym", + "b1250" + ], + [ + "gene_synonym", + "kch" + ] + ], + "dna_sequence": "GTGAGTCACTGGGCTACATTCAAACAAACAGCAACAAATTTATGGGTGACCCTTCGGCACGACATTCTCGCGCTGGCCGTCTTTTTAAATGGATTGCTTATTTTTAAAACAATCTATGGTATGTCGGTCAATTTGCTTGATATTTTCCATATCAAAGCATTTTCAGAGTTGGATCTCTCCTTGCTGGCAAACGCCCCACTCTTTATGCTCGGCGTCTTTCTTGTCCTGAACTCCATTGGCTTACTGTTCCGGGCAAAGCTCGCATGGGCAATCAGTATCATTTTGTTGTTGATAGCGCTAATTTACACCCTGCATTTTTATCCCTGGCTGAAATTTAGTATTGGATTTTGCATTTTTACGCTGGTGTTTTTGCTGATACTGCGCAAAGACTTCTCCCACAGTAGCGCCGCAGCCGGGACAATTTTTGCATTTATTAGTTTCACGACATTACTGTTTTACTCAACCTACGGTGCGCTTTATTTAAGCGAAGGTTTTAATCCGCGAATAGAAAGTTTGATGACCGCGTTCTATTTTTCGATAGAAACCATGTCAACCGTCGGCTATGGCGATATTGTCCCTGTTTCTGAATCAGCACGATTGTTCACTATTTCGGTCATTATTTCCGGCATTACCGTTTTTGCCACATCTATGACCTCAATTTTTGGTCCGCTTATCCGCGGGGGATTCAACAAACTTGTAAAAGGAAACAATCATACAATGCATCGTAAAGATCATTTTATTGTTTGCGGACATTCGATTCTCGCCATCAATACGATCCTGCAACTGAATCAACGCGGACAAAACGTAACGGTTATCAGCAACTTGCCTGAAGATGATATCAAGCAACTTGAGCAACGCTTAGGCGATAATGCTGATGTTATCCCCGGTGACAGTAATGACAGTTCTGTATTAAAGAAAGCGGGAATCGATCGTTGCCGGGCCATTCTGGCGCTGAGTGATAACGATGCAGATAACGCGTTTGTTGTACTCTCGGCAAAAGATATGAGCAGTGATGTCAAAACAGTTCTCGCCGTCAGTGATAGCAAAAACCTGAATAAGATTAAGATGGTACATCCGGATATCATTCTCTCACCGCAACTGTTTGGCAGCGAAATTCTGGCGCGAGTTTTAAATGGTGAAGAGATTAATAATGATATGCTCGTTTCAATGTTGTTGAACTCAGGTCATGGTATTTTCAGCGATAACGATGAACTAGAAACGAAAGCTGACAGTAAAGAATCGGCGCAAAAATAG", + "dna_sequence_length": 1254, + "functions": [ + "voltage-gated potassium channel" + ], + "id": "CDS_1231", + "location": [ + [ + "NC_000913", + 1310269, + "-", + 1254 + ] + ], + "md5": "063ac19735d1084761ae96138d346a3f", + "parent_gene": "", + "protein_md5": "1eb606362774bbd5f55c3821d08cd428", + "protein_translation": "MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDELETKADSKESAQK", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004192" + ], + [ + "gene_synonym", + "ECK1245" + ], + [ + "gene_synonym", + "EcoGene:EG11607" + ], + [ + "gene_synonym", + "GI:90111237" + ], + [ + "gene_synonym", + "GeneID:949085" + ], + [ + "gene_synonym", + "JW1243" + ], + [ + "gene_synonym", + "NP_415767.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB55" + ], + [ + "gene_synonym", + "b1251" + ], + [ + "gene_synonym", + "yciI" + ] + ], + "dna_sequence": "GTGTTGTATGTTATTTACGCTCAAGACAAAGCTGATAGCCTCGAAAAACGCCTTTCCGTTCGTCCGGCACATTTAGCACGTTTACAGTTACTGCATGATGAAGGTCGTTTGTTGACAGCTGGTCCAATGCCAGCGGTAGACAGTAACGATCCAGGGGCTGCGGGATTTACTGGCTCAACCGTTATTGCTGAATTTGAATCGCTGGAAGCAGCTCAGGCCTGGGCCGATGCTGACCCGTACGTAGCGGCAGGAGTCTATGAACACGTTTCAGTGAAACCATTTAAGAAAGTGTTCTGA", + "dna_sequence_length": 297, + "functions": [ + "putative DGPF domain-containing enzyme" + ], + "id": "CDS_1232", + "location": [ + [ + "NC_000913", + 1310865, + "-", + 297 + ] + ], + "md5": "6246ac585ac81e0bb57c352ec8f21490", + "parent_gene": "", + "protein_md5": "a1fec884fbd293ee94fe6eaf5b7f10c7", + "protein_translation": "MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004196" + ], + [ + "gene_synonym", + "ECK1246" + ], + [ + "gene_synonym", + "EcoGene:EG11012" + ], + [ + "gene_synonym", + "GI:16129213" + ], + [ + "gene_synonym", + "GeneID:945843" + ], + [ + "gene_synonym", + "JW5195" + ], + [ + "gene_synonym", + "NP_415768.1" + ], + [ + "gene_synonym", + "T1rec" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02929" + ], + [ + "gene_synonym", + "b1252" + ], + [ + "gene_synonym", + "exbA" + ], + [ + "gene_synonym", + "tonB" + ] + ], + "dna_sequence": "ATGACCCTTGATTTACCTCGCCGCTTCCCCTGGCCGACGTTACTTTCGGTCTGCATTCATGGTGCTGTTGTGGCGGGTCTGCTCTATACCTCGGTACATCAGGTTATTGAACTACCTGCGCCTGCGCAGCCGATTTCTGTCACGATGGTTACGCCTGCTGATCTCGAACCGCCACAAGCCGTTCAGCCGCCACCGGAGCCGGTGGTAGAGCCAGAACCGGAACCTGAGCCGATCCCCGAACCGCCAAAAGAAGCACCGGTGGTCATTGAAAAGCCGAAGCCGAAACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGTACAGGAGCAGCCAAAACGCGATGTCAAACCCGTAGAGTCGCGTCCGGCATCACCGTTTGAAAATACGGCACCGGCACGCCTGACATCAAGTACAGCAACGGCTGCAACCAGCAAGCCGGTTACCAGTGTGGCTTCAGGACCACGCGCATTAAGCCGTAATCAGCCGCAGTATCCGGCACGAGCACAGGCATTGCGCATTGAAGGGCAGGTTAAAGTTAAATTTGACGTTACGCCGGATGGTCGCGTGGATAACGTACAAATCCTCTCAGCCAAGCCTGCGAACATGTTTGAGCGTGAGGTGAAAAATGCGATGCGCAGATGGCGTTATGAGCCGGGTAAGCCAGGCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAA", + "dna_sequence_length": 720, + "functions": [ + "membrane spanning protein in TonB-ExbB-ExbD transport complex" + ], + "id": "CDS_1233", + "location": [ + [ + "NC_000913", + 1311089, + "+", + 720 + ] + ], + "md5": "e3f5b28b2863fb47e551ca05d1abe9ab", + "parent_gene": "", + "protein_md5": "7c2fb99fde3d05cc6e84a2308a9085cf", + "protein_translation": "MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004198" + ], + [ + "gene_synonym", + "ECK1247" + ], + [ + "gene_synonym", + "EcoGene:EG11121" + ], + [ + "gene_synonym", + "GI:16129214" + ], + [ + "gene_synonym", + "GeneID:946634" + ], + [ + "gene_synonym", + "JW1245" + ], + [ + "gene_synonym", + "NP_415769.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Z0" + ], + [ + "gene_synonym", + "b1253" + ], + [ + "gene_synonym", + "yciA" + ] + ], + "dna_sequence": "ATGTCTACAACACATAACGTCCCTCAGGGCGATCTTGTTTTACGTACTTTAGCCATGCCCGCCGATACCAATGCCAATGGTGACATCTTTGGTGGTTGGTTAATGTCACAAATGGATATTGGCGGCGCTATTCTGGCAAAAGAAATTGCCCACGGTCGCGTAGTGACTGTGCGGGTTGAAGGAATGACTTTCTTACGGCCGGTTGCGGTCGGCGATGTGGTGTGCTGCTATGCACGCTGTGTCCAGAAAGGGACGACATCGGTCAGCATTAATATTGAAGTGTGGGTGAAAAAAGTAGCGTCTGAACCAATTGGGCAACGCTATAAAGCGACAGAAGCATTATTTAAGTATGTCGCGGTTGATCCTGAAGGAAAACCTCGCGCCTTACCTGTTGAGTAA", + "dna_sequence_length": 399, + "functions": [ + "acyl-CoA esterase" + ], + "id": "CDS_1234", + "location": [ + [ + "NC_000913", + 1312246, + "-", + 399 + ] + ], + "md5": "4e9970a8d5d4b3c32ec155f3d669a766", + "parent_gene": "", + "protein_md5": "e95dcf69c366ac7c00165adc12060f86", + "protein_translation": "MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004200" + ], + [ + "gene_synonym", + "ECK1248" + ], + [ + "gene_synonym", + "EcoGene:EG11122" + ], + [ + "gene_synonym", + "GI:16129215" + ], + [ + "gene_synonym", + "GeneID:946228" + ], + [ + "gene_synonym", + "JW1246" + ], + [ + "gene_synonym", + "NP_415770.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A710" + ], + [ + "gene_synonym", + "b1254" + ], + [ + "gene_synonym", + "ispA" + ], + [ + "gene_synonym", + "ispZ" + ], + [ + "gene_synonym", + "yciB" + ] + ], + "dna_sequence": "ATGAAGCAGTTTCTTGATTTTTTACCGCTGGTTGTCTTTTTCGCGTTTTACAAGATTTATGACATCTATGCGGCTACTGCGGCGCTGATCGTCGCCACGGCGATTGTGCTTATCTATAGCTGGGTTCGCTTTCGTAAGGTTGAGAAGATGGCCCTGATCACTTTTGTTCTGGTGGTCGTCTTCGGTGGCTTGACGCTGTTCTTCCACAATGATGAGTTTATTAAATGGAAGGTTACTGTCATTTATGCTCTATTTGCGGGAGCCCTGTTAGTCAGCCAATGGGTGATGAAAAAGCCGCTAATTCAGCGGATGCTGGGTAAAGAACTCACGCTGCCGCAACCGGTATGGTCGAAGCTGAATCTGGCCTGGGCTGTTTTCTTTATCCTTTGCGGTCTGGCAAACATCTACATCGCATTCTGGCTGCCGCAAAATATTTGGGTCAACTTTAAAGTCTTTGGCCTGACCGCCCTTACCTTAATCTTCACATTGTTAAGCGGTATCTATATCTACCGCCACATGCCGCAGGAAGATAAATCCTAA", + "dna_sequence_length": 540, + "functions": [ + "IspA family inner membrane protein" + ], + "id": "CDS_1235", + "location": [ + [ + "NC_000913", + 1312890, + "-", + 540 + ] + ], + "md5": "113547ae3273054554587d1cdf956969", + "parent_gene": "", + "protein_md5": "7e6505cd3b62bd795c957ca416f31030", + "protein_translation": "MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGIYIYRHMPQEDKS", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004204" + ], + [ + "gene_synonym", + "ECK1249" + ], + [ + "gene_synonym", + "EcoGene:EG11123" + ], + [ + "gene_synonym", + "GI:16129216" + ], + [ + "gene_synonym", + "GeneID:945844" + ], + [ + "gene_synonym", + "JW1247" + ], + [ + "gene_synonym", + "NP_415771.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21365" + ], + [ + "gene_synonym", + "b1255" + ], + [ + "gene_synonym", + "yciC" + ] + ], + "dna_sequence": "ATGTCTATCACGGCGCAGTCCGTATACCGTGACACCGGAAATTTCTTCCGTAATCAATTTATGACCATTCTGTTGGTATCGTTGCTATGTGCGTTTATCACAGTGGTGTTAGGGCATGTTTTCTCACCCAGTGATGCACAGCTTGCGCAGCTCAATGACGGCGTGCCCGTTAGCGGCAGTAGTGGGTTGTTCGACCTGGTTCAGAATATGTCACCGGAACAGCAACAAATTTTGCTGCAGGCTTCAGCGGCGTCCACTTTTTCAGGATTAATCGGTAACGCCATTCTCGCCGGAGGCGTAATATTAATTATCCAGCTGGTGTCTGCGGGTCAGAGAGTCAGTGCGCTGCGAGCTATTGGTGCCAGTGCGCCGATATTGCCAAAGTTATTTATTCTGATTTTTCTGACTACCCTTTTAGTACAGATTGGCATCATGCTGGTGGTCGTTCCGGGAATTATCATGGCCATTTTACTGGCCCTGGCACCGGTGATGTTGGTACAGGACAAAATGGGCGTTTTTGCCTCGATGCGTAGCAGTATGCGGCTGACTTGGGCGAATATGCGTCTGGTGGCACCCGCAGTACTGAGCTGGTTGCTGGCAAAAACACTGTTGCTGCTTTTTGCCTCTTCTTTTGCCGCATTAACCCCGGAAATTGGTGCCGTACTGGCGAACACCTTGAGCAACCTGATTTCAGCCATATTGCTCATCTATCTGTTCCGCCTGTATATGTTGATTCGCCAATAA", + "dna_sequence_length": 744, + "functions": [ + "UPF0259 family inner membrane protein" + ], + "id": "CDS_1236", + "location": [ + [ + "NC_000913", + 1313663, + "-", + 744 + ] + ], + "md5": "2a9c988c4d05401826097e73141593ab", + "parent_gene": "", + "protein_md5": "fa05d62c41789a91e0a75e6318242768", + "protein_translation": "MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004210" + ], + [ + "gene_synonym", + "ECK1250" + ], + [ + "gene_synonym", + "EcoGene:EG11124" + ], + [ + "gene_synonym", + "GI:16129217" + ], + [ + "gene_synonym", + "GeneID:945128" + ], + [ + "gene_synonym", + "JW1248" + ], + [ + "gene_synonym", + "NP_415772.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A915" + ], + [ + "gene_synonym", + "b1256" + ], + [ + "gene_synonym", + "ompW" + ], + [ + "gene_synonym", + "yciD" + ] + ], + "dna_sequence": "ATGAAAAAGTTAACAGTGGCGGCTTTGGCAGTAACAACTCTTCTCTCTGGCAGTGCCTTTGCGCATGAAGCAGGCGAATTTTTTATGCGTGCAGGTTCTGCAACCGTACGTCCAACAGAAGGTGCTGGTGGTACGTTAGGAAGTCTGGGTGGATTCAGCGTGACCAATAACACGCAACTGGGCCTTACGTTTACTTATATGGCGACCGACAACATTGGTGTGGAATTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCGTTCATCATCTGCCACCAACACTGATGGCGCAGTGGTATTTTGGTGATGCCAGCAGCAAATTCCGTCCTTACGTTGGGGCAGGTATTAACTACACCACCTTCTTTGATAATGGATTTAACGATCATGGCAAAGAGGCAGGGCTTTCCGATCTCAGTCTGAAAGATTCCTGGGGAGCTGCCGGGCAGGTGGGGGTTGATTATCTGATTAACCGTGACTGGTTGGTTAACATGTCAGTGTGGTACATGGATATCGATACCACCGCCAATTATAAGCTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAA", + "dna_sequence_length": 639, + "functions": [ + "outer membrane protein W" + ], + "id": "CDS_1237", + "location": [ + [ + "NC_000913", + 1314020, + "+", + 639 + ] + ], + "md5": "f07881561ed0662d79670ccc23a53292", + "parent_gene": "", + "protein_md5": "6dd1d92415e620b86e62141ad0579296", + "protein_translation": "MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004212" + ], + [ + "gene_synonym", + "ECK1251" + ], + [ + "gene_synonym", + "EcoGene:EG11125" + ], + [ + "gene_synonym", + "GI:16129218" + ], + [ + "gene_synonym", + "GeneID:946871" + ], + [ + "gene_synonym", + "JW1249" + ], + [ + "gene_synonym", + "NP_415773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21363" + ], + [ + "gene_synonym", + "b1257" + ], + [ + "gene_synonym", + "yciE" + ] + ], + "dna_sequence": "ATGAATCGTATTGAACATTATCATGACTGGTTACGTGACGCCCACGCAATGGAAAAGCAAGCCGAATCTATGCTTGAATCCATGGCCAGCCGTATAGATAATTATCCTGAACTACGCGCTCGTATTGAACAACATCTTAGTGAAACCAAAAACCAGATTGTTCAACTGGAAACTATTCTTGATCGTAATGACATTTCACGTTCAGTCATTAAAGATTCCATGAGTAAAATGGCTGCGCTTGGGCAGTCAATCGGTGGTATATTCCCTTCTGATGAAATAGTCAAAGGCTCTATTAGCGGATATGTCTTCGAGCAATTTGAAATCGCCTGTTACACCTCACTATTAGCAGCAGCAAAAAATGCCGGTGATACAGCTTCAATTCCAACCATCGAAGCGATTTTAAATGAGGAAAAGCAAATGGCCGACTGGCTGATTCAGAATATTCCGCAAACAACTGAGAAATTTTTAATTCGCTCTGAAACTGATGGCGTAGAAGCGAAGAAATAA", + "dna_sequence_length": 507, + "functions": [ + "putative rubrerythrin/ferritin-like metal-binding protein" + ], + "id": "CDS_1238", + "location": [ + [ + "NC_000913", + 1315224, + "-", + 507 + ] + ], + "md5": "3b685dbe9b7f0fa027d4c1a1c46a66b6", + "parent_gene": "", + "protein_md5": "5e876b2c040d02e51b8211de91219860", + "protein_translation": "MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK", + "protein_translation_length": 168, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004222" + ], + [ + "gene_synonym", + "ECK1252" + ], + [ + "gene_synonym", + "EcoGene:EG11126" + ], + [ + "gene_synonym", + "GI:16129219" + ], + [ + "gene_synonym", + "GeneID:947133" + ], + [ + "gene_synonym", + "JW1250" + ], + [ + "gene_synonym", + "NP_415774.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21362" + ], + [ + "gene_synonym", + "b1258" + ], + [ + "gene_synonym", + "yciF" + ] + ], + "dna_sequence": "ATGAATATGAAGACCATTGAAGATGTATTTATTCACCTGCTTTCAGATACCTACAGCGCAGAAAAACAATTAACCCGGGCACTGGCAAAACTCGCAAGAGCAACATCAAATGAAAAATTAAGTCAGGCTTTTCATGCGCACCTCGAGGAAACTCATGGACAGATTGAACGTATTGATCAAGTTGTGGAGTCCGAATCGAACCTGAAAATTAAGCGCATGAAATGTGTGGCAATGGAAGGTCTTATTGAAGAAGCTAATGAGGTCATCGAAAGTACCGAGAAAAACGAAGTGCGTGATGCCGCACTGATTGCCGCAGCACAGAAAGTCGAGCATTATGAGATTGCCAGTTACGGGACATTAGCGACGCTGGCTGAACAATTAGGTTACCGTAAAGCAGCGAAGCTTCTGAAAGAAACCCTGGAAGAAGAAAAGGCCACCGACATCAAACTGACTGATCTGGCCATTAATAACGTAAATAAGAAAGCCGAAAATAAAGCCTGA", + "dna_sequence_length": 501, + "functions": [ + "putative rubrerythrin/ferritin-like metal-binding protein" + ], + "id": "CDS_1239", + "location": [ + [ + "NC_000913", + 1315770, + "-", + 501 + ] + ], + "md5": "1105a6dce11d5898bc10253b000e1851", + "parent_gene": "", + "protein_md5": "ba6041c09b74a8a96f61c7c64f2c02b8", + "protein_translation": "MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKKAENKA", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004229" + ], + [ + "gene_synonym", + "ECK1253" + ], + [ + "gene_synonym", + "EcoGene:EG11127" + ], + [ + "gene_synonym", + "GI:90111238" + ], + [ + "gene_synonym", + "GeneID:947489" + ], + [ + "gene_synonym", + "JW1251" + ], + [ + "gene_synonym", + "NP_415775.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21361" + ], + [ + "gene_synonym", + "b1259" + ], + [ + "gene_synonym", + "yciG" + ] + ], + "dna_sequence": "ATGGCCGAACATCGTGGTGGTTCAGGAAATTTCGCCGAAGACCGTGAGAAGGCATCCGACGCAGGCCGTAAAGGCGGTCAGCATAGCGGCGGTAATTTTAAAAATGATCCGCAACGCGCATCTGAAGCGGGTAAAAAAGGCGGTCAACAAAGCGGTGGTAATAAATCAGGCAAATCCTGA", + "dna_sequence_length": 180, + "functions": [ + "KGG family protein" + ], + "id": "CDS_1240", + "location": [ + [ + "NC_000913", + 1316035, + "-", + 180 + ] + ], + "md5": "7c55da7c40f15e6f1411b80d0e153fa4", + "parent_gene": "", + "protein_md5": "ec654bea684d593746da27b5cc2c198e", + "protein_translation": "MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS", + "protein_translation_length": 59, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004232" + ], + [ + "gene_synonym", + "ECK1254" + ], + [ + "gene_synonym", + "EcoGene:EG11024" + ], + [ + "gene_synonym", + "GI:16129221" + ], + [ + "gene_synonym", + "GeneID:946204" + ], + [ + "gene_synonym", + "JW1252" + ], + [ + "gene_synonym", + "NP_415776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A877" + ], + [ + "gene_synonym", + "b1260" + ], + [ + "gene_synonym", + "trpA" + ], + [ + "gene_synonym", + "try" + ], + [ + "gene_synonym", + "tryp" + ] + ], + "dna_sequence": "ATGGAACGCTACGAATCTCTGTTTGCCCAGTTGAAGGAGCGCAAAGAAGGCGCATTCGTTCCTTTCGTCACGCTCGGTGATCCGGGCATTGAGCAGTCATTGAAAATTATCGATACGCTAATTGAAGCCGGTGCTGACGCGCTGGAGTTAGGTATCCCCTTCTCCGACCCACTGGCGGATGGCCCGACGATTCAAAACGCCACTCTGCGCGCCTTTGCGGCAGGTGTGACTCCGGCACAATGTTTTGAAATGCTGGCACTGATTCGCCAGAAACACCCGACCATTCCCATTGGCCTGTTGATGTATGCCAATCTGGTGTTTAACAAAGGCATTGATGAGTTTTATGCCCAGTGCGAAAAAGTCGGCGTCGATTCGGTGCTGGTTGCCGATGTGCCAGTTGAAGAGTCCGCGCCCTTCCGCCAGGCCGCGTTGCGTCATAATGTCGCACCTATCTTCATCTGCCCGCCAAATGCCGATGACGACCTGCTGCGCCAGATAGCCTCTTACGGTCGTGGTTACACCTATTTGCTGTCACGAGCAGGCGTGACCGGCGCAGAAAACCGCGCCGCGTTACCCCTCAATCATCTGGTTGCGAAGCTGAAAGAGTACAACGCTGCACCTCCATTGCAGGGATTTGGTATTTCCGCCCCGGATCAGGTAAAAGCAGCGATTGATGCAGGAGCTGCGGGCGCGATTTCTGGTTCGGCCATTGTTAAAATCATCGAGCAACATATTAATGAGCCAGAGAAAATGCTGGCGGCACTGAAAGTTTTTGTACAACCGATGAAAGCGGCGACGCGCAGTTAA", + "dna_sequence_length": 807, + "functions": [ + "tryptophan synthase, alpha subunit" + ], + "id": "CDS_1241", + "location": [ + [ + "NC_000913", + 1317222, + "-", + 807 + ] + ], + "md5": "eec06239d384d7ca717282dbe5545e74", + "parent_gene": "", + "protein_md5": "1f1188d5fb1c600b0f1c9e3dd8f05eb8", + "protein_translation": "MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004234" + ], + [ + "gene_synonym", + "ECK1255" + ], + [ + "gene_synonym", + "EcoGene:EG11025" + ], + [ + "gene_synonym", + "GI:16129222" + ], + [ + "gene_synonym", + "GeneID:945768" + ], + [ + "gene_synonym", + "JW1253" + ], + [ + "gene_synonym", + "NP_415777.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A879" + ], + [ + "gene_synonym", + "b1261" + ], + [ + "gene_synonym", + "trpB" + ] + ], + "dna_sequence": "ATGACAACATTACTTAACCCCTATTTTGGTGAGTTTGGCGGCATGTACGTGCCACAAATCCTGATGCCTGCTCTGCGCCAGCTGGAAGAAGCTTTTGTCAGTGCGCAAAAAGATCCTGAATTTCAGGCTCAGTTCAACGACCTGCTGAAAAACTATGCCGGGCGTCCAACCGCGCTGACCAAATGCCAGAACATTACAGCCGGGACGAACACCACGCTGTATCTCAAGCGTGAAGATTTGCTGCACGGCGGCGCGCATAAAACTAACCAGGTGCTGGGGCAGGCGTTGCTGGCGAAGCGGATGGGTAAAACCGAAATCATCGCCGAAACCGGTGCCGGTCAGCATGGCGTGGCGTCGGCCCTTGCCAGCGCCCTGCTCGGCCTGAAATGCCGTATTTATATGGGTGCCAAAGACGTTGAACGCCAGTCGCCTAACGTTTTTCGTATGCGCTTAATGGGTGCGGAAGTGATCCCGGTGCATAGCGGTTCCGCGACGCTGAAAGATGCCTGTAACGAGGCGCTGCGCGACTGGTCCGGTAGTTACGAAACCGCGCACTATATGCTGGGCACCGCAGCTGGCCCGCATCCTTATCCGACCATTGTGCGTGAGTTTCAGCGGATGATTGGCGAAGAAACCAAAGCGCAGATTCTGGAAAGAGAAGGTCGCCTGCCGGATGCCGTTATCGCCTGTGTTGGCGGCGGTTCGAATGCCATCGGCATGTTTGCTGATTTCATCAATGAAACCAACGTCGGCCTGATTGGTGTGGAGCCAGGTGGTCACGGTATCGAAACTGGCGAGCACGGCGCACCGCTAAAACATGGTCGCGTGGGTATCTATTTCGGTATGAAAGCGCCGATGATGCAAACCGAAGACGGGCAGATTGAAGAATCTTACTCCATCTCCGCCGGACTGGATTTCCCGTCTGTCGGCCCACAACACGCGTATCTTAACAGCACTGGACGCGCTGATTACGTGTCTATTACCGATGATGAAGCCCTTGAAGCCTTCAAAACGCTGTGCCTGCACGAAGGGATCATCCCGGCGCTGGAATCCTCCCACGCCCTGGCCCATGCGTTGAAAATGATGCGCGAAAACCCGGATAAAGAGCAGCTACTGGTGGTTAACCTTTCCGGTCGCGGCGATAAAGACATCTTCACCGTTCACGATATTTTGAAAGCACGAGGGGAAATCTGA", + "dna_sequence_length": 1194, + "functions": [ + "tryptophan synthase, beta subunit" + ], + "id": "CDS_1242", + "location": [ + [ + "NC_000913", + 1318415, + "-", + 1194 + ] + ], + "md5": "27801a4f146a7294744ed15dc5a53803", + "parent_gene": "", + "protein_md5": "6928ee6ba77b77478258aa92b0d2de90", + "protein_translation": "MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI", + "protein_translation_length": 397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004238" + ], + [ + "gene_synonym", + "ECK1256" + ], + [ + "gene_synonym", + "EcoGene:EG11026" + ], + [ + "gene_synonym", + "GI:635341464" + ], + [ + "gene_synonym", + "GeneID:945519" + ], + [ + "gene_synonym", + "JW1254" + ], + [ + "gene_synonym", + "NP_415778.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00909" + ], + [ + "gene_synonym", + "b1262" + ], + [ + "gene_synonym", + "trpC" + ], + [ + "gene_synonym", + "trpF" + ] + ], + "dna_sequence": "ATGATGCAAACCGTTTTAGCGAAAATCGTCGCAGACAAGGCGATTTGGGTAGAAGCCCGCAAACAGCAGCAACCGCTGGCCAGTTTTCAGAATGAGGTTCAGCCGAGCACGCGACATTTTTATGATGCGCTACAGGGTGCGCGCACGGCGTTTATTCTGGAGTGCAAGAAAGCGTCGCCGTCAAAAGGCGTGATCCGTGATGATTTCGATCCAGCACGCATTGCCGCCATTTATAAACATTACGCTTCGGCAATTTCGGTGCTGACTGATGAGAAATATTTTCAGGGGAGCTTTAATTTCCTCCCCATCGTCAGCCAAATCGCCCCGCAGCCGATTTTATGTAAAGACTTCATTATCGACCCTTACCAGATCTATCTGGCGCGCTATTACCAGGCCGATGCCTGCTTATTAATGCTTTCAGTACTGGATGACGACCAATATCGCCAGCTTGCCGCCGTCGCTCACAGTCTGGAGATGGGGGTGCTGACCGAAGTCAGTAATGAAGAGGAACAGGAGCGCGCCATTGCATTGGGAGCAAAGGTCGTTGGCATCAACAACCGCGATCTGCGTGATTTGTCGATTGATCTCAACCGTACCCGCGAGCTTGCGCCGAAACTGGGGCACAACGTGACGGTAATCAGCGAATCCGGCATCAATACTTACGCTCAGGTGCGCGAGTTAAGCCACTTCGCTAACGGTTTTCTGATTGGTTCGGCGTTGATGGCCCATGACGATTTGCACGCCGCCGTGCGCCGGGTGTTGCTGGGTGAGAATAAAGTATGTGGCCTGACGCGTGGGCAAGATGCTAAAGCAGCTTATGACGCGGGCGCGATTTACGGTGGGTTGATTTTTGTTGCGACATCACCGCGTTGCGTCAACGTTGAACAGGCGCAGGAAGTGATGGCTGCGGCACCGTTGCAGTATGTTGGCGTGTTCCGCAATCACGATATTGCCGATGTGGTGGACAAAGCTAAGGTGTTATCGCTGGCGGCAGTGCAACTGCATGGTAATGAAGAACAGCTGTATATCGATACGCTGCGTGAAGCTCTGCCAGCACATGTTGCCATCTGGAAAGCATTAAGCGTCGGTGAAACCCTGCCCGCCCGCGAGTTTCAGCACGTTGATAAATATGTTTTAGACAACGGCCAGGGTGGAAGCGGGCAACGTTTTGACTGGTCACTATTAAATGGTCAATCGCTTGGCAACGTTCTGCTGGCGGGGGGCTTAGGCGCAGATAACTGCGTGGAAGCGGCACAAACCGGCTGCGCCGGACTTGATTTTAATTCTGCTGTAGAGTCGCAACCGGGCATCAAAGACGCACGTCTTTTGGCCTCGGTTTTCCAGACGCTGCGCGCATATTAA", + "dna_sequence_length": 1362, + "functions": [ + "indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase" + ], + "id": "CDS_1243", + "location": [ + [ + "NC_000913", + 1319788, + "-", + 1362 + ] + ], + "md5": "df8193e1c5a87d0dab540fc39f705a77", + "parent_gene": "", + "protein_md5": "f7865ba4aca1dcee0fe409b75a7657e2", + "protein_translation": "MMQTVLAKIVADKAIWVEARKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLRAY", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004241" + ], + [ + "gene_synonym", + "ECK1257" + ], + [ + "gene_synonym", + "EcoGene:EG11027" + ], + [ + "gene_synonym", + "GI:16129224" + ], + [ + "gene_synonym", + "GeneID:945109" + ], + [ + "gene_synonym", + "JW1255" + ], + [ + "gene_synonym", + "NP_415779.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00904" + ], + [ + "gene_synonym", + "b1263" + ], + [ + "gene_synonym", + "trpD" + ], + [ + "gene_synonym", + "trpGD" + ] + ], + "dna_sequence": "ATGGCTGACATTCTGCTGCTCGATAATATCGACTCTTTTACGTACAACCTGGCAGATCAGTTGCGCAGCAATGGGCATAACGTGGTGATTTACCGCAACCATATTCCGGCGCAAACCTTAATTGAACGCCTGGCGACCATGAGCAATCCGGTGCTGATGCTTTCTCCTGGCCCCGGTGTGCCGAGCGAAGCCGGTTGTATGCCGGAACTCCTCACCCGCTTGCGTGGCAAGCTGCCCATTATTGGCATTTGCCTCGGACATCAGGCGATTGTCGAAGCTTACGGGGGCTATGTCGGTCAGGCGGGCGAAATTCTCCACGGTAAAGCCTCCAGCATTGAACATGACGGTCAGGCGATGTTTGCCGGATTAACAAACCCGCTGCCGGTGGCGCGTTATCACTCGCTGGTTGGCAGTAACATTCCGGCCGGTTTAACCATCAACGCCCATTTTAATGGCATGGTGATGGCAGTACGTCACGATGCGGATCGCGTTTGTGGATTCCAGTTCCATCCGGAATCCATTCTCACCACCCAGGGCGCTCGCCTGCTGGAACAAACGCTGGCCTGGGCGCAGCAGAAACTAGAGCCAGCCAACACGCTGCAACCGATTCTGGAAAAACTGTATCAGGCGCAGACGCTTAGCCAACAAGAAAGCCACCAGCTGTTTTCAGCGGTGGTGCGTGGCGAGCTGAAGCCGGAACAACTGGCGGCGGCGCTGGTGAGCATGAAAATTCGCGGTGAGCACCCGAACGAGATCGCCGGGGCAGCAACCGCGCTACTGGAAAACGCAGCGCCGTTCCCGCGCCCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTGCGTTTGTCGCCGCGGCCTGTGGGCTGAAAGTGGCGAAACACGGCAACCGTAGCGTCTCCAGTAAATCTGGTTCGTCCGATCTGCTGGCGGCGTTCGGTATTAATCTTGATATGAACGCCGATAAATCGCGCCAGGCGCTGGATGAGTTAGGTGTATGTTTCCTCTTTGCGCCGAAGTATCACACCGGATTCCGCCACGCGATGCCGGTTCGCCAGCAACTGAAAACCCGCACCCTGTTCAATGTGCTGGGGCCATTGATTAACCCGGCGCATCCGCCGCTGGCGTTAATTGGTGTTTATAGTCCGGAACTGGTGCTGCCGATTGCCGAAACCTTGCGCGTGCTGGGGTATCAACGCGCGGCGGTGGTGCACAGCGGCGGGATGGATGAAGTTTCATTACACGCGCCGACAATCGTTGCCGAACTGCATGACGGCGAAATTAAAAGCTATCAGCTCACCGCAGAAGACTTTGGCCTGACACCCTACCACCAGGAGCAACTGGCAGGCGGAACACCGGAAGAAAACCGTGACATTTTAACACGTTTGTTACAAGGTAAAGGCGACGCCGCCCATGAAGCAGCCGTCGCTGCGAACGTCGCCATGTTAATGCGCCTGCATGGCCATGAAGATCTGCAAGCCAATGCGCAAACCGTTCTTGAGGTACTGCGCAGTGGTTCCGCTTACGACAGAGTCACCGCACTGGCGGCACGAGGGTAA", + "dna_sequence_length": 1596, + "functions": [ + "fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase" + ], + "id": "CDS_1244", + "location": [ + [ + "NC_000913", + 1321384, + "-", + 1596 + ] + ], + "md5": "8cea18c2a3e14921ff6a7e23c7229879", + "parent_gene": "", + "protein_md5": "e9f1d9cb551c4481107e5ee141184990", + "protein_translation": "MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANAQTVLEVLRSGSAYDRVTALAARG", + "protein_translation_length": 531, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004244" + ], + [ + "gene_synonym", + "ECK1258" + ], + [ + "gene_synonym", + "EcoGene:EG11028" + ], + [ + "gene_synonym", + "GI:16129225" + ], + [ + "gene_synonym", + "GeneID:945846" + ], + [ + "gene_synonym", + "JW1256" + ], + [ + "gene_synonym", + "NP_415780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00895" + ], + [ + "gene_synonym", + "anth" + ], + [ + "gene_synonym", + "b1264" + ], + [ + "gene_synonym", + "trpE" + ], + [ + "gene_synonym", + "tryD" + ], + [ + "gene_synonym", + "tryp-4" + ] + ], + "dna_sequence": "ATGCAAACACAAAAACCGACTCTCGAACTGCTAACCTGCGAAGGCGCTTATCGCGACAATCCCACCGCGCTTTTTCACCAGTTGTGTGGGGATCGTCCGGCAACGCTGCTGCTGGAATCCGCAGATATCGACAGCAAAGATGATTTAAAAAGCCTGCTGCTGGTAGACAGTGCGCTGCGCATTACAGCTTTAGGTGACACTGTCACAATCCAGGCACTTTCCGGCAACGGCGAAGCCCTCCTGGCACTACTGGATAACGCCCTGCCTGCGGGTGTGGAAAGTGAACAATCACCAAACTGCCGTGTGCTGCGCTTCCCCCCTGTCAGTCCACTGCTGGATGAAGACGCCCGCTTATGCTCCCTTTCGGTTTTTGACGCTTTCCGTTTATTGCAGAATCTGTTGAATGTACCGAAGGAAGAACGAGAAGCCATGTTCTTCGGCGGCCTGTTCTCTTATGACCTTGTGGCGGGATTTGAAGATTTACCGCAACTGTCAGCGGAAAATAACTGCCCTGATTTCTGTTTTTATCTCGCTGAAACGCTGATGGTGATTGACCATCAGAAAAAAAGCACCCGTATTCAGGCCAGCCTGTTTGCTCCGAATGAAGAAGAAAAACAACGTCTCACTGCTCGCCTGAACGAACTACGTCAGCAACTGACCGAAGCCGCGCCGCCGCTGCCAGTGGTTTCCGTGCCGCATATGCGTTGTGAATGTAATCAGAGCGATGAAGAGTTCGGTGGCGTAGTGCGTTTGTTGCAAAAAGCGATTCGCGCTGGAGAAATTTTCCAGGTGGTGCCATCTCGCCGTTTCTCTCTGCCCTGCCCGTCACCGCTGGCGGCCTATTACGTGCTGAAAAAGAGTAATCCCAGCCCGTACATGTTTTTTATGCAGGATAATGATTTCACCCTATTTGGCGCGTCGCCGGAAAGCTCGCTCAAGTATGATGCCACCAGCCGCCAGATTGAGATCTACCCGATTGCCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTGCACCCCCGGCAGCCGCTACGTCGCCGATCTCACCAAAGTTGACCGTTATTCCTATGTGATGCACCTCGTCTCTCGCGTAGTCGGCGAACTGCGTCACGATCTTGACGCCCTGCACGCTTATCGCGCCTGTATGAATATGGGGACGTTAAGCGGTGCGCCGAAAGTACGCGCTATGCAGTTAATTGCCGAGGCGGAAGGTCGTCGCCGCGGCAGCTACGGCGGCGCGGTAGGTTATTTCACCGCGCATGGCGATCTCGACACCTGCATTGTGATCCGCTCGGCGCTGGTGGAAAACGGTATCGCCACCGTGCAAGCGGGTGCTGGTGTAGTCCTTGATTCTGTTCCGCAGTCGGAAGCCGACGAAACCCGTAACAAAGCCCGCGCTGTACTGCGCGCTATTGCCACCGCGCATCATGCACAGGAGACTTTCTGA", + "dna_sequence_length": 1563, + "functions": [ + "component I of anthranilate synthase" + ], + "id": "CDS_1245", + "location": [ + [ + "NC_000913", + 1322946, + "-", + 1563 + ] + ], + "md5": "6ac6745360d9c44918298e1d2a31f198", + "parent_gene": "", + "protein_md5": "1257fab5b110f1dc5c33be728facf3db", + "protein_translation": "MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLALLDNALPAGVESEQSPNCRVLRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFEDLPQLSAENNCPDFCFYLAETLMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQLTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGVVLDSVPQSEADETRNKARAVLRAIATAHHAQETF", + "protein_translation_length": 520, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004246" + ], + [ + "gene_synonym", + "ECK1259" + ], + [ + "gene_synonym", + "EcoGene:EG11274" + ], + [ + "gene_synonym", + "GI:16129226" + ], + [ + "gene_synonym", + "GeneID:945856" + ], + [ + "gene_synonym", + "JW1257" + ], + [ + "gene_synonym", + "NP_415781.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD92" + ], + [ + "gene_synonym", + "b1265" + ], + [ + "gene_synonym", + "trpEE" + ], + [ + "gene_synonym", + "trpL" + ] + ], + "dna_sequence": "ATGAAAGCAATTTTCGTACTGAAAGGTTGGTGGCGCACTTCCTGA", + "dna_sequence_length": 45, + "functions": [ + "trp operon leader peptide" + ], + "id": "CDS_1246", + "location": [ + [ + "NC_000913", + 1323082, + "-", + 45 + ] + ], + "md5": "a72e188ffc0d382d28af85b2f8e8f1c4", + "parent_gene": "", + "protein_md5": "a656f81e21bd955cd09a74e9d6759db3", + "protein_translation": "MKAIFVLKGWWRTS", + "protein_translation_length": 14, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004252" + ], + [ + "gene_synonym", + "ECK1260" + ], + [ + "gene_synonym", + "EcoGene:EG14257" + ], + [ + "gene_synonym", + "GI:16129227" + ], + [ + "gene_synonym", + "GeneID:945857" + ], + [ + "gene_synonym", + "JW1258" + ], + [ + "gene_synonym", + "NP_415782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77766" + ], + [ + "gene_synonym", + "b1266" + ], + [ + "gene_synonym", + "trpH" + ], + [ + "gene_synonym", + "yciV" + ] + ], + "dna_sequence": "TTGAGCGACACGAATTATGCAGTGATTTACGACCTGCACAGCCATACCACAGCTTCCGATGGCTGCCTGACGCCAGAAGCATTGGTGCACCGTGCAGTCGAGATGCGCGTCGGCACCCTGGCGATCACCGACCATGACACCACAGCTGCAATCGCGCCAGCAAGAGAGGAAATTTCACGTTCGGGACTGGCGTTGAATCTTATTCCCGGCGTGGAAATTTCCACGGTCTGGGAAAATCATGAAATTCATATTGTCGGGCTGAATATTGATATTACTCATCCGCTAATGTGTGAGTTCCTCGCGCAGCAGACAGAACGGCGCAATCAGCGGGCGCAGCTGATTGCCGAAAGACTTGAAAAAGCGCAAATACCTGGGGCGCTGGAAGGCGCACAACGACTGGCGCAGGGCGGCGCAGTGACGCGCGGTCATTTTGCGCGTTTCCTTGTTGAGTGCGGCAAAGCCAGTTCAATGGCGGATGTCTTTAAAAAGTATCTGGCGCGCGGGAAAACCGGATACGTTCCGCCACAGTGGTGTACAATAGAACAAGCTATTGATGTCATTCATCATTCTGGCGGTAAGGCGGTGCTAGCTCATCCTGGGCGGTACAATCTTAGTGCTAAATGGCTGAAAAGATTGGTTGCGCATTTTGCCGAACACCACGGTGACGCGATGGAAGTCGCGCAGTGCCAGCAATCGCCCAATGAACGTACCCAGCTGGCGGCCCTTGCGCGTCAGCATCATTTATGGGCATCACAAGGATCTGATTTTCATCAGCCATGCCCGTGGATCGAACTGGGTCGTAAACTCTGGCTGCCCGCAGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGA", + "dna_sequence_length": 882, + "functions": [ + "PHP domain protein" + ], + "id": "CDS_1247", + "location": [ + [ + "NC_000913", + 1323220, + "+", + 882 + ] + ], + "md5": "278c87142194bc536283384aa40ef25c", + "parent_gene": "", + "protein_md5": "33a35732fb5524b8600ceca10ac0debd", + "protein_translation": "MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLAALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004254" + ], + [ + "gene_synonym", + "ECK1261" + ], + [ + "gene_synonym", + "EcoGene:EG12967" + ], + [ + "gene_synonym", + "GI:162135901" + ], + [ + "gene_synonym", + "GeneID:945854" + ], + [ + "gene_synonym", + "JW5196" + ], + [ + "gene_synonym", + "NP_415783.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR4" + ], + [ + "gene_synonym", + "b1267" + ], + [ + "gene_synonym", + "yciO" + ] + ], + "dna_sequence": "ATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCTGTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGACCTATTCATTTGTTGATAACGTTGCGTTTCGTTTAATGAAAAACAACACGCCGGGCAACTATACCTTCATCCTGAAGGGGACGAAGGAAGTGCCACGCCGTCTGTTGCAGGAAAAACGCAAAACCATCGGTATGCGTGTGCCTTCTAACCCTATCGCTCAGGCGTTACTTGAAGCATTGGGCGAACCGATGCTTTCCACTTCGCTAATGCTGCCAGGCAGCGAATTTACCGAATCGGACCCGGAAGAAATTAAAGATCGTCTGGAAAAACAGGTAGATTTGATTATTCACGGCGGCTATCTCGGGCAGAAACCGACAACGGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAA", + "dna_sequence_length": 621, + "functions": [ + "putative RNA binding protein" + ], + "id": "CDS_1248", + "location": [ + [ + "NC_000913", + 1324098, + "+", + 621 + ] + ], + "md5": "1728f291fb0e3e602ed55a909bd9cfc0", + "parent_gene": "", + "protein_md5": "8c594a998eee7b31f51598408074e2db", + "protein_translation": "MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004256" + ], + [ + "gene_synonym", + "ECK1262" + ], + [ + "gene_synonym", + "EcoGene:EG12969" + ], + [ + "gene_synonym", + "GI:16129229" + ], + [ + "gene_synonym", + "GeneID:945850" + ], + [ + "gene_synonym", + "JW5197" + ], + [ + "gene_synonym", + "NP_415784.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45848" + ], + [ + "gene_synonym", + "b1268" + ], + [ + "gene_synonym", + "yciP" + ], + [ + "gene_synonym", + "yciQ" + ] + ], + "dna_sequence": "ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATGGGGTGCTCGACATCAAAGAAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGCTTTTATCGTGATTTACCACGACTATGGATGCAGCCTGATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGCCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGCATGTTACGTCTCGATGCGAAGCTAGTTTACGACGATAAAGGTTTTTGTGCCGATATCGTAAATCTGATTGTGAAAGGAAAAATTCATCTGGAAGATCAGTCTGACAAGAACCAGCAAATCCTGATTCGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTATTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTACCGCTGTTTGCCTGACCGGTTATCTCACTGGCATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGACAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA", + "dna_sequence_length": 1896, + "functions": [ + "enhancer of membrane protein expression", + "putative inner membrane protein" + ], + "id": "CDS_1249", + "location": [ + [ + "NC_000913", + 1324746, + "+", + 1896 + ] + ], + "md5": "21cd751b1aad46e23bd4a1843dea84ee", + "parent_gene": "", + "protein_md5": "ba0f52f1dd09d9a0cc84f88a72b1cda3", + "protein_translation": "MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW", + "protein_translation_length": 631, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004259" + ], + [ + "gene_synonym", + "ECK1263" + ], + [ + "gene_synonym", + "EcoGene:EG12433" + ], + [ + "gene_synonym", + "GI:16129230" + ], + [ + "gene_synonym", + "GeneID:945840" + ], + [ + "gene_synonym", + "JW1261" + ], + [ + "gene_synonym", + "NP_415785.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37765" + ], + [ + "gene_synonym", + "b1269" + ], + [ + "gene_synonym", + "rluB" + ], + [ + "gene_synonym", + "yciL" + ] + ], + "dna_sequence": "ATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGTGAAGTTCGTCGTCTGTGGGAAGCGGTTGGTGTGCAGGTGAGCCGCCTGATCCGTGTTCGTTACGGTGATATCCCACTGCCAAAAGGTCTGCCACGCGGTGGCTGGACGGAGCTGGACCTCGCCCAGACTAACTATCTGCGCGAACTGGTGGAGCTACCGCCAGAAACCAGCTCTAAAGTCGCTGTAGAAAAAGACCGTCGTCGCATGAAGGCGAATCAGATTCGTCGTGCGGTGAAACGTCACAGTCAGGTGAGCGGCGGTCGTCGTTCTGGCGGACGTAATAATAACGGTTAA", + "dna_sequence_length": 876, + "functions": [ + "23S rRNA pseudouridine(2605) synthase" + ], + "id": "CDS_1250", + "location": [ + [ + "NC_000913", + 1326852, + "+", + 876 + ] + ], + "md5": "2d471b7b63d6ef3148c741b535953d17", + "parent_gene": "", + "protein_md5": "2d06d19be4e854443c9185e797f09654", + "protein_translation": "MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004261" + ], + [ + "gene_synonym", + "ECK1264" + ], + [ + "gene_synonym", + "EcoGene:EG10130" + ], + [ + "gene_synonym", + "GI:16129231" + ], + [ + "gene_synonym", + "GeneID:945839" + ], + [ + "gene_synonym", + "JW1262" + ], + [ + "gene_synonym", + "NP_415786.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9H5" + ], + [ + "gene_synonym", + "b1270" + ], + [ + "gene_synonym", + "btuR" + ], + [ + "gene_synonym", + "cobA" + ] + ], + "dna_sequence": "ATGAGTGATGAACGCTACCAACAGCGTCAGCAGCGAGTGAAAGAAAAAGTAGATGCTCGTGTGGCCCAGGCCCAGGATGAACGCGGTATTATCATCGTCTTTACCGGCAATGGAAAAGGCAAAACCACCGCGGCATTTGGTACGGCAACACGCGCAGTTGGTCACGGAAAAAAAGTAGGCGTCGTGCAGTTTATTAAAGGCACCTGGCCTAATGGCGAACGCAATCTGCTGGAGCCACATGGCGTTGAGTTTCAGGTGATGGCAACGGGCTTTACCTGGGATACACAAAACCGCGAGTCTGATACCGCCGCCTGCCGCGAAGTCTGGCAACATGCAAAGCGGATGCTTGCTGATTCCTCACTGGATATGGTTTTGCTTGATGAACTGACGTATATGGTGGCGTATGACTATTTGCCACTGGAAGAAGTGGTGCAGGCGTTAAATGAACGTCCACATCAACAGACGGTGATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAA", + "dna_sequence_length": 591, + "functions": [ + "cob(I)yrinic acid a,c-diamide adenosyltransferase" + ], + "id": "CDS_1251", + "location": [ + [ + "NC_000913", + 1328357, + "-", + 591 + ] + ], + "md5": "d171247c464a72b264ea19aa61663c0c", + "parent_gene": "", + "protein_md5": "12eb535e586bf0ca4aa5e39931655a45", + "protein_translation": "MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDTAACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITGRGCHRDILELADTVSELRPVKHAFDAGVKAQIGIDY", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004263" + ], + [ + "gene_synonym", + "ECK1265" + ], + [ + "gene_synonym", + "EcoGene:EG11759" + ], + [ + "gene_synonym", + "GI:16129232" + ], + [ + "gene_synonym", + "GeneID:945838" + ], + [ + "gene_synonym", + "JW1263" + ], + [ + "gene_synonym", + "NP_415787.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31808" + ], + [ + "gene_synonym", + "b1271" + ], + [ + "gene_synonym", + "yciK" + ] + ], + "dna_sequence": "ATGCATTACCAGCCAAAACAAGATTTACTCAATGATCGCATTATCCTGGTGACGGGAGCCAGCGATGGTATTGGTCGTGAAGCCGCGATGACGTATGCACGCTATGGTGCGACAGTGATTCTGTTGGGCCGTAATGAAGAAAAATTACGTCAGGTAGCCAGCCACATAAACGAAGAAACTGGGCGTCAGCCACAGTGGTTTATTCTCGATTTGCTGACCTGCACGTCCGAAAATTGCCAACAACTGGCACAGCGCATTGCCGTTAATTATCCGCGTCTGGATGGTGTTTTGCATAATGCCGGATTGCTCGGCGATGTTTGCCCAATGAGCGAACAAAATCCGCAGGTCTGGCAGGACGTCATGCAGGTCAACGTTAATGCCACCTTTATGCTCACCCAGGCACTGCTTCCTTTATTACTCAAATCGGACGCCGGTTCACTGGTCTTTACTTCATCAAGCGTTGGACGTCAGGGACGAGCCAACTGGGGTGCATATGCAGCGTCGAAATTTGCCACCGAAGGGATGATGCAGGTACTGGCCGATGAATATCAGCAGCGCCTGCGTGTCAACTGCATTAACCCAGGCGGTACGCGCACCGCAATGCGTGCCAGCGCCTTCCCGACCGAAGATCCACAGAAACTTAAAACACCCGCTGATATCATGCCGCTCTACCTCTGGCTGATGGGCGATGACAGCCGCCGTAAAACCGGCATGACCTTTGACGCCCAACCGGGCCGTAAACCAGGAATTTCCCAATGA", + "dna_sequence_length": 759, + "functions": [ + "putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase" + ], + "id": "CDS_1252", + "location": [ + [ + "NC_000913", + 1329112, + "-", + 759 + ] + ], + "md5": "eb13860392e1582809f8eaf51d68ca58", + "parent_gene": "", + "protein_md5": "300e549f11fdd41c0c9fcd5e849be56e", + "protein_translation": "MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004267" + ], + [ + "gene_synonym", + "ECK1266" + ], + [ + "gene_synonym", + "EcoGene:EG10956" + ], + [ + "gene_synonym", + "GI:16129233" + ], + [ + "gene_synonym", + "GeneID:945858" + ], + [ + "gene_synonym", + "JW1264" + ], + [ + "gene_synonym", + "NP_415788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG14" + ], + [ + "gene_synonym", + "b1272" + ], + [ + "gene_synonym", + "sohB" + ] + ], + "dna_sequence": "GTGGAATTGTTGTCTGAATATGGTTTGTTTTTGGCGAAAATCGTTACCGTTGTGCTAGCGATTGCGGCGATTGCCGCCATTATTGTCAATGTTGCTCAACGTAATAAACGCCAGCGTGGCGAGTTACGGGTCAACAATCTCAGCGAACAGTATAAGGAGATGAAAGAAGAACTGGCCGCGGCGCTGATGGACTCACATCAGCAAAAACAGTGGCACAAAGCGCAGAAGAAAAAGCATAAGCAAGAAGCGAAAGCAGCAAAAGCGAAAGCCAAACTGGGCGAGGTGGCAACTGACAGTAAACCCCGCGTCTGGGTGCTGGATTTTAAAGGCAGCATGGACGCCCATGAAGTGAACTCGCTACGTGAAGAGATAACGGCTGTACTCGCAGCATTCAAACCGCAGGATCAGGTTGTGCTCCGTCTGGAAAGCCCTGGTGGCATGGTGCATGGTTACGGGCTGGCGGCTTCGCAACTGCAGCGTCTGCGCGATAAAAACATTCCTTTAACTGTTACGGTAGACAAAGTCGCTGCCAGCGGCGGTTACATGATGGCCTGTGTGGCGGACAAAATTGTTTCCGCACCGTTTGCTATTGTGGGTTCCATTGGCGTGGTGGCGCAAATGCCCAACTTTAACCGCTTCCTGAAAAGCAAAGATATTGATATCGAACTGCACACTGCCGGGCAGTATAAGCGCACGCTGACGTTGCTGGGTGAAAATACCGAAGAAGGGCGGGAGAAATTCCGCGAAGAGTTGAACGAAACGCATCAGTTGTTTAAAGATTTTGTGAAGCGTATGCGTCCTTCTCTGGATATTGAACAGGTGGCAACGGGTGAACACTGGTACGGACAACAGGCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAAGTGGTCAATGTACGCTATATGCAGCGTAAACGACTCATTGACCGATTCACCGGCAGCGCGGCAGAGAGCGCCGATCGATTGTTGCTACGCTGGTGGCAGCGGGGTCAAAAGCCATTGATGTAA", + "dna_sequence_length": 1050, + "functions": [ + "inner membrane protein, S49 peptidase family protein" + ], + "id": "CDS_1253", + "location": [ + [ + "NC_000913", + 1329332, + "+", + 1050 + ] + ], + "md5": "543e8454c309af15d94b1258fe07e964", + "parent_gene": "", + "protein_md5": "db58d84cc2e2aa290ff6c4fb0dd50b51", + "protein_translation": "MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQYKEMKEELAAALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPRVWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004269" + ], + [ + "gene_synonym", + "ECK1267" + ], + [ + "gene_synonym", + "EcoGene:EG12868" + ], + [ + "gene_synonym", + "GI:16129234" + ], + [ + "gene_synonym", + "GeneID:945860" + ], + [ + "gene_synonym", + "JW1265" + ], + [ + "gene_synonym", + "NP_415789.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB61" + ], + [ + "gene_synonym", + "b1273" + ], + [ + "gene_synonym", + "yciN" + ] + ], + "dna_sequence": "ATGAACAAAGAGACACAACCCATCGACCGCGAAACGCTGTTGAAAGAGGCCAACAAAATCATTCGTGAGCATGAGGATACGCTCGCAGGGATTGAAGCCACCGGCGTCACGCAGCGTAATGGCGTGCTGGTATTTACCGGCGACTACTTTTTAGATGAACAAGGATTGCCAACAGCCAAAAGCACCGCGGTGTTTAATATGTTCAAACACCTGGCCCATGTGCTTTCAGAAAAATATCATCTGGTTGATTAA", + "dna_sequence_length": 252, + "functions": [ + "DUF2498 protein YciN" + ], + "id": "CDS_1254", + "location": [ + [ + "NC_000913", + 1330668, + "-", + 252 + ] + ], + "md5": "fbe24d6ccc3bbc59fd105f871ad11373", + "parent_gene": "", + "protein_md5": "00ed2acece391bc2d4fba1e81e860271", + "protein_translation": "MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004275" + ], + [ + "gene_synonym", + "ECK1268" + ], + [ + "gene_synonym", + "EcoGene:EG11013" + ], + [ + "gene_synonym", + "GI:16129235" + ], + [ + "gene_synonym", + "GeneID:945862" + ], + [ + "gene_synonym", + "JW1266" + ], + [ + "gene_synonym", + "NP_415790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06612" + ], + [ + "gene_synonym", + "asuA?" + ], + [ + "gene_synonym", + "b1274" + ], + [ + "gene_synonym", + "supX" + ], + [ + "gene_synonym", + "topA" + ] + ], + "dna_sequence": "ATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAGCTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGAGAAGGTCGTCTCTGAACTGAAACAACTGGCTGAAAAAGCCGACCACATCTATCTCGCAACCGACCTTGACCGCGAAGGGGAAGCCATTGCATGGCACCTGCGGGAAGTGATTGGGGGTGATGATGCGCGCTATAGCCGAGTGGTGTTTAACGAAATTACTAAAAACGCGATCCGCCAGGCATTTAACAAACCGGGTGAGCTGAATATTGATCGTGTTAATGCCCAGCAGGCGCGTCGCTTTATGGACCGCGTGGTGGGGTATATGGTTTCGCCGCTGCTATGGAAAAAGATCGCTCGTGGCCTGTCTGCCGGTCGTGTGCAGTCGGTGGCGGTTCGCCTGGTGGTCGAGCGTGAGCGTGAAATTAAAGCGTTCGTGCCGGAAGAGTTCTGGGAAGTCGATGCCAGCACGACCACGCCATCTGGTGAAGCGTTGGCGTTACAGGTGACTCATCAGAACGACAAACCGTTCCGTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAACTCACAGGAAGCGCACGAAGCGATTCGTCCTTCTGACGTCAATGTGATGGCGGAATCGCTGAAGGATATGGAAGCAGATGCGCAGAAACTGTACCAGTTAATCTGGCGTCAGTTCGTTGCCTGCCAGATGACCCCAGCGAAATATGACTCCACGACGCTGACCGTTGGTGCGGGCGATTTCCGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATGGGCGAAATCGTCACCGATCGCCTTGAAGAAAATTTCCGCGAGTTAATGAACTACGACTTTACCGCGCAGATGGAAAACAGCCTCGACCAGGTGGCAAATCACGAAGCAGAGTGGAAAGCTGTACTGGATCACTTCTTCTCGGATTTCACCCAGCAGTTAGATAAAGCTGAAAAAGATCCGGAAGAGGGTGGTATGCGCCCGAACCAGATGGTTCTGACCAGCATTGACTGCCCGACTTGTGGTCGCAAAATGGGGATTCGCACAGCGAGCACCGGGGTATTCCTTGGCTGTTCTGGCTATGCGCTGCCGCCGAAAGAGCGTTGCAAAACCACCATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAACGCGCTGCGCGCAAAACGTCGTTGCCCGAAATGCGGCACGGCGATGGACAGCTATCTCATCGATCCGAAACGTAAGTTGCATGTCTGTGGTAATAACCCAACCTGCGACGGTTACGAGATCGAAGAGGGCGAATTCCGCATTAAAGGTTATGACGGCCCGATCGTTGAGTGTGAAAAATGTGGCTCTGAAATGCACCTGAAAATGGGGCGTTTCGGTAAATACATGGCCTGCACCAACGAAGAGTGTAAAAACACACGTAAGATTTTACGTAACGGCGAAGTGGCACCACCGAAAGAAGATCCGGTGCCATTACCTGAGCTGCCGTGCGAAAAATCAGATGCTTATTTCGTGCTGCGTGACGGTGCTGCCGGTGTGTTCCTGGCTGCCAACACTTTCCCGAAATCGCGTGAAACGCGTGCGCCACTGGTGGAAGAGCTTTATCGCTTCCGCGACCGTCTGCCGGAAAAACTGCGTTATCTGGCCGATGCGCCACAGCAGGATCCGGAAGGTAATAAGACCATGGTTCGCTTTAGCCGTAAAACCAAACAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAA", + "dna_sequence_length": 2598, + "functions": [ + "DNA topoisomerase I, omega subunit" + ], + "id": "CDS_1255", + "location": [ + [ + "NC_000913", + 1331048, + "+", + 2598 + ] + ], + "md5": "fe8fe8729189804ca5612b966e9aadb6", + "parent_gene": "", + "protein_md5": "16725acee627b252ee2a45c4c783d2b6", + "protein_translation": "MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK", + "protein_translation_length": 865, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004279" + ], + [ + "gene_synonym", + "ECK1269" + ], + [ + "gene_synonym", + "EcoGene:EG10184" + ], + [ + "gene_synonym", + "GI:16129236" + ], + [ + "gene_synonym", + "GeneID:945771" + ], + [ + "gene_synonym", + "JW1267" + ], + [ + "gene_synonym", + "NP_415791.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9F3" + ], + [ + "gene_synonym", + "b1275" + ], + [ + "gene_synonym", + "cysB" + ] + ], + "dna_sequence": "ATGAAATTACAACAACTTCGCTATATTGTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCATCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGCCACAGAAGCGCTGCATCTGTATGAAGATTTAGTGATGTTACCGTGCTACCACTGGAATCGGGCTATTGTAGTCACTCCGGATCACCCGCTGGCAGGCAAAAAAGCCATTACCATTGAAGAACTGGCGCAATATCCGTTGGTGACATATACCTTCGGCTTTACCGGACGTTCAGAACTGGATACTGCCTTTAATCGCGCAGGGTTAACGCCGCGTATCGTTTTCACGGCAACGGATGCTGACGTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTGGATCCGGTCGCCGATCCCGACCTTGTGCGTGTTGATGCTCACGATATCTTCAGCCACAGTACAACCAAAATTGGTTTTCGCCGTAGTACTTTCTTGCGCAGTTATATGTATGATTTCATTCAGCGTTTTGCACCGCATTTAACGCGTGATGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAA", + "dna_sequence_length": 975, + "functions": [ + "N-acetylserine-responsive cysteine regulon transcriptional activator", + "autorepressor" + ], + "id": "CDS_1256", + "location": [ + [ + "NC_000913", + 1333855, + "+", + 975 + ] + ], + "md5": "ebcbac8bd41c1d6ea97c8af550b38841", + "parent_gene": "", + "protein_md5": "14303662561815729cd506cb95d39cd6", + "protein_translation": "MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4433" + ], + [ + "gene_synonym", + "EcoGene:EG14463" + ], + [ + "gene_synonym", + "GI:635341465" + ], + [ + "gene_synonym", + "GeneID:1450256" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CB62" + ], + [ + "gene_synonym", + "YP_588449.2" + ], + [ + "gene_synonym", + "b4522" + ], + [ + "gene_synonym", + "ymiA" + ] + ], + "dna_sequence": "TTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAA", + "dna_sequence_length": 165, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1257", + "location": [ + [ + "NC_000913", + 1335124, + "+", + 165 + ] + ], + "md5": "b4887ccb6216d18580aeaecf047c54e8", + "parent_gene": "", + "protein_md5": "92e08a9a43bc6ab0853567f6d2973c56", + "protein_translation": "MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285043" + ], + [ + "gene_synonym", + "ASAP:ABE-0285044" + ], + [ + "gene_synonym", + "ASAP:ABE-0285107" + ], + [ + "gene_synonym", + "ECK1270" + ], + [ + "gene_synonym", + "EcoGene:EG14351" + ], + [ + "gene_synonym", + "GI:145698251" + ], + [ + "gene_synonym", + "GeneID:1450257" + ], + [ + "gene_synonym", + "JW5198" + ], + [ + "gene_synonym", + "JW5199" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58094" + ], + [ + "gene_synonym", + "YP_588450.2" + ], + [ + "gene_synonym", + "b4523" + ], + [ + "gene_synonym", + "yciX" + ] + ], + "dna_sequence": "ATGGTCGGTCAGGAGCAACTGGAGTCGTCACCATTATGCCAGCATAGTGACAATGAAACAGAAACGAAACGGGAATGTTCCGTCGTTATTCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAA", + "dna_sequence_length": 168, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1258", + "location": [ + [ + "NC_000913", + 1335291, + "+", + 168 + ] + ], + "md5": "cdd73ceeb2aa0abdb5a800c4e7c05ef6", + "parent_gene": "", + "protein_md5": "f786bb04bcbdb43a697f722afc2a5233", + "protein_translation": "MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFIELFAEDDQPKQ", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004283" + ], + [ + "gene_synonym", + "ECK1271" + ], + [ + "gene_synonym", + "EcoGene:EG11325" + ], + [ + "gene_synonym", + "GI:16129237" + ], + [ + "gene_synonym", + "GeneID:946724" + ], + [ + "gene_synonym", + "JW1268" + ], + [ + "gene_synonym", + "NP_415792.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25516" + ], + [ + "gene_synonym", + "acn" + ], + [ + "gene_synonym", + "acnA" + ], + [ + "gene_synonym", + "b1276" + ] + ], + "dna_sequence": "ATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGTAACTCGGTTACCGAAGAGGATATCCACGCGCTGGCAGGATGGCTGAAAAATGCCCATGCTGACCGTGAAATTGCCTACCGCCCGGCAAGGGTGCTGATGCAGGACTTTACCGGCGTACCTGCCGTTGTTGATCTGGCGGCAATGCGCGAAGCGGTTAAACGCCTCGGCGGCGATACTGCAAAGGTTAACCCGCTCTCACCGGTCGACCTGGTCATTGACCACTCGGTGACCGTCGATCGTTTTGGTGATGATGAGGCATTTGAAGAAAACGTACGCCTGGAAATGGAGCGCAACCACGAACGTTATGTGTTCCTGAAATGGGGAAAGCAAGCGTTCAGTCGGTTTAGCGTCGTGCCGCCAGGCACAGGCATTTGCCATCAGGTTAACCTCGAATATCTCGGCAAAGCAGTGTGGAGTGAATTGCAGGACGGTGAATGGATTGCTTATCCGGATACACTCGTTGGTACTGACTCGCACACCACCATGATCAACGGCCTTGGCGTGCTGGGGTGGGGCGTTGGTGGGATCGAAGCAGAAGCCGCAATGTTAGGCCAGCCGGTTTCCATGCTTATCCCGGATGTAGTGGGCTTCAAACTTACCGGAAAATTACGTGAAGGTATTACCGCCACAGACCTGGTTCTCACTGTTACCCAAATGCTGCGCAAACATGGCGTGGTGGGGAAATTCGTCGAATTTTATGGTGATGGTCTGGATTCACTACCGTTGGCGGATCGCGCCACCATTGCCAATATGTCGCCAGAATATGGTGCCACCTGTGGCTTCTTCCCAATCGATGCTGTAACCCTCGATTACATGCGTTTAAGCGGGCGCAGCGAAGATCAGGTCGAGTTGGTCGAAAAATATGCCAAAGCGCAGGGCATGTGGCGTAACCCGGGCGATGAACCAATTTTTACCAGTACGTTAGAACTGGATATGAATGACGTTGAAGCGAGCCTGGCAGGGCCTAAACGCCCACAGGATCGCGTTGCACTGCCCGATGTACCAAAAGCATTTGCCGCCAGTAACGAACTGGAAGTGAATGCCACGCATAAAGATCGCCAGCCGGTCGATTATGTTATGAACGGACATCAGTATCAGTTACCTGATGGCGCTGTGGTCATTGCTGCGATAACCTCGTGCACCAACACCTCTAACCCAAGTGTGCTGATGGCCGCAGGCTTGCTGGCGAAAAAAGCCGTAACTCTGGGCCTCAAGCGGCAACCATGGGTCAAAGCGTCGCTGGCACCGGGTTCGAAAGTCGTTTCTGATTATCTGGCAAAAGCGAAACTGACACCGTATCTCGACGAACTGGGGTTTAACCTTGTGGGATACGGTTGTACCACCTGTATTGGTAACTCTGGGCCGCTGCCCGATCCTATCGAAACGGCAATCAAAAAAAGCGATTTAACCGTCGGTGCGGTGCTGTCCGGCAACCGTAACTTTGAAGGCCGTATCCATCCGCTGGTTAAAACTAACTGGCTGGCCTCGCCGCCGCTGGTGGTTGCCTATGCGCTGGCGGGAAATATGAATATCAACCTGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGCGATCCGGTTTATCTGAAAGATATCTGGCCATCGGCACAAGAAATTGCCCGTGCGGTAGAACAAGTCTCCACAGAAATGTTCCGCAAAGAGTACGCAGAAGTTTTTGAAGGCACAGCAGAGTGGAAGGGAATTAACGTCACACGATCCGATACCTACGGTTGGCAGGAGGACTCAACCTATATTCGCTTATCGCCTTTCTTTGATGAAATGCAGGCAACACCAGCACCAGTGGAAGATATTCACGGTGCGCGGATCCTCGCAATGCTGGGGGATTCAGTCACCACTGACCATATCTCTCCGGCGGGCAGTATTAAGCCCGACAGCCCAGCGGGTCGATATCTACAAGGTCGGGGTGTTGAGCGAAAAGACTTTAACTCCTACGGTTCGCGGCGTGGTAACCATGAAGTGATGATGCGCGGCACCTTCGCCAATATTCGCATCCGTAATGAAATGGTGCCTGGCGTTGAAGGGGGGATGACGCGGCATTTACCTGACAGCGACGTAGTCTCTATTTATGATGCTGCGATGCGCTATAAGCAGGAGCAAACGCCGCTGGCGGTGATTGCCGGGAAAGAGTATGGATCAGGCTCCAGTCGTGACTGGGCGGCAAAAGGTCCGCGTCTGCTTGGTATTCGTGTGGTGATTGCCGAATCGTTTGAACGAATTCACCGTTCGAATTTAATTGGCATGGGCATCCTGCCGCTGGAATTTCCGCAAGGCGTAACGCGTAAAACGTTAGGGCTAACCGGGGAAGAGAAGATTGATATTGGCGATCTGCAAAACCTACAACCCGGCGCGACGGTTCCGGTGACGCTTACGCGCGCGGATGGTAGCCAGGAAGTCGTACCCTGCCGTTGTCGTATCGACACCGCGACGGAGTTGACCTACTACCAGAACGACGGCATTTTGCATTATGTCATTCGTAATATGTTGAAGTAA", + "dna_sequence_length": 2676, + "functions": [ + "aconitate hydratase 1", + "aconitase A" + ], + "id": "CDS_1259", + "location": [ + [ + "NC_000913", + 1335831, + "+", + 2676 + ] + ], + "md5": "bd959e4a306326ffd44dbebddf22c9c3", + "parent_gene": "", + "protein_md5": "b3db67621dfb3268018b228994a05da0", + "protein_translation": "MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKVLLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSEDQVELVEKYAKAQGMWRNPGDEPIFTSTLELDMNDVEASLAGPKRPQDRVALPDVPKAFAASNELEVNATHKDRQPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKSDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNINLASEPIGHDRKGDPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKGINVTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK", + "protein_translation_length": 891, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004285" + ], + [ + "gene_synonym", + "ECK1272" + ], + [ + "gene_synonym", + "EcoGene:EG11331" + ], + [ + "gene_synonym", + "GI:16129238" + ], + [ + "gene_synonym", + "GeneID:945763" + ], + [ + "gene_synonym", + "JW1269" + ], + [ + "gene_synonym", + "NP_415793.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7I7" + ], + [ + "gene_synonym", + "b1277" + ], + [ + "gene_synonym", + "ribA" + ] + ], + "dna_sequence": "ATGCAGCTTAAACGTGTGGCAGAAGCCAAACTGCCAACCCCATGGGGCGATTTCCTGATGGTGGGATTTGAAGAACTGGCAACCGGACACGATCATGTCGCGCTAGTCTATGGCGATATTTCCGGGCATACCCCGGTACTTGCGCGCGTCCATTCCGAATGTCTGACCGGTGACGCCCTGTTCAGCTTGCGCTGCGATTGTGGCTTCCAGCTCGAAGCGGCATTGACGCAAATTGCCGAGGAAGGCCGTGGTATTTTGCTGTATCACCGTCAGGAAGGTCGTAACATTGGTCTGCTGAATAAAATCCGCGCTTACGCACTGCAGGATCAAGGTTACGATACCGTAGAGGCTAACCACCAGTTAGGCTTCGCCGCTGATGAGCGCGACTTCACTCTTTGCGCTGATATGTTCAAACTCCTTGGCGTCAATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAGTCGAAATTCTGACCGAAGCAGGGATTAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAA", + "dna_sequence_length": 591, + "functions": [ + "GTP cyclohydrolase II" + ], + "id": "CDS_1260", + "location": [ + [ + "NC_000913", + 1339160, + "-", + 591 + ] + ], + "md5": "8a2c1cc0b523819e9fd85faec1bd0dd0", + "parent_gene": "", + "protein_md5": "b7d9b3a05260c79240e03e6dc0fb6f8c", + "protein_translation": "MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004294" + ], + [ + "gene_synonym", + "ECK1273" + ], + [ + "gene_synonym", + "EcoGene:EG10705" + ], + [ + "gene_synonym", + "GI:16129239" + ], + [ + "gene_synonym", + "GeneID:945863" + ], + [ + "gene_synonym", + "JW1270" + ], + [ + "gene_synonym", + "NP_415794.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A924" + ], + [ + "gene_synonym", + "b1278" + ], + [ + "gene_synonym", + "pgpB" + ] + ], + "dna_sequence": "ATGCGTTCGATTGCCAGACGTACCGCAGTGGGAGCTGCACTATTGCTTGTCATGCCAGTAGCCGTATGGATTTCTGGCTGGCGTTGGCAACCTGGAGAACAAAGTTGGCTACTAAAAGCGGCTTTTTGGGTTACTGAAACTGTCACCCAGCCCTGGGGCGTCATTACACATTTGATTTTATTCGGCTGGTTTCTCTGGTGTCTGCGTTTTCGCATTAAGGCTGCCTTTGTATTATTTGCCATTCTGGCGGCCGCAATCCTTGTGGGACAAGGCGTTAAATCCTGGATCAAAGACAAAGTCCAGGAACCACGACCTTTTGTTATCTGGCTGGAAAAAACACATCATATTCCGGTTGATGAGTTCTACACTTTAAAGCGAGCAGAACGCGGAAATCTAGTGAAAGAACAGTTGGCTGAAGAGAAAAATATCCCACAATATTTGCGTTCACACTGGCAGAAAGAGACGGGGTTTGCCTTTCCTTCCGGTCACACGATGTTTGCTGCCAGTTGGGCACTGCTGGCCGTTGGTTTGCTGTGGCCGCGTCGGCGAACGTTAACCATTGCTATCTTGCTGGTCTGGGCAACGGGAGTCATGGGAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAA", + "dna_sequence_length": 765, + "functions": [ + "phosphatidylglycerophosphatase B" + ], + "id": "CDS_1261", + "location": [ + [ + "NC_000913", + 1339330, + "+", + 765 + ] + ], + "md5": "68e5f1b92671c4a65d562a41ff9c05dc", + "parent_gene": "", + "protein_md5": "395f94a9f33cf11ba3dcbc322e63ad12", + "protein_translation": "MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004298" + ], + [ + "gene_synonym", + "ECK1274" + ], + [ + "gene_synonym", + "EcoGene:EG13904" + ], + [ + "gene_synonym", + "GI:16129240" + ], + [ + "gene_synonym", + "GeneID:944936" + ], + [ + "gene_synonym", + "JW1271" + ], + [ + "gene_synonym", + "NP_415795.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV4" + ], + [ + "gene_synonym", + "b1279" + ], + [ + "gene_synonym", + "lapA" + ], + [ + "gene_synonym", + "yciS" + ] + ], + "dna_sequence": "GTGAAATATTTACTCATTTTCTTACTGGTGTTAGCGATCTTCGTGATTTCGGTCACGTTGGGTGCGCAGAACGATCAACAGGTGACGTTTAATTATCTGTTAGCGCAAGGGGAGTACCGTATTTCCACATTGCTGGCGGTATTGTTTGCTGCGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAA", + "dna_sequence_length": 309, + "functions": [ + "DUF1049 family inner membrane protein, function unknown" + ], + "id": "CDS_1262", + "location": [ + [ + "NC_000913", + 1340243, + "+", + 309 + ] + ], + "md5": "711d7a6feefbd2b061ba817169132b96", + "parent_gene": "", + "protein_md5": "646dfec017e5b46d57250016c5f87672", + "protein_translation": "MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE", + "protein_translation_length": 102, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004300" + ], + [ + "gene_synonym", + "ECK1275" + ], + [ + "gene_synonym", + "EcoGene:EG12691" + ], + [ + "gene_synonym", + "GI:16129241" + ], + [ + "gene_synonym", + "GeneID:944858" + ], + [ + "gene_synonym", + "JW1272" + ], + [ + "gene_synonym", + "NP_415796.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB58" + ], + [ + "gene_synonym", + "b1280" + ], + [ + "gene_synonym", + "lapB" + ], + [ + "gene_synonym", + "yciM" + ] + ], + "dna_sequence": "ATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAGAAGTGCGCAACAAAACAAGCAAGATGAAGCCAACCGCTTGTCGCGTGATTACGTAGCGGGGGTTAACTTCCTGCTTAGTAATCAACAGGATAAAGCGGTAGACCTGTTTCTCGATATGCTTAAAGAGGATACAGGCACCGTTGAAGCCCACCTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGCGTATCCATAATGATGGGACGCGTGTTTATGGCGAAAGGAGAATACGCCAAAGCCGTCGAAAGTCTGCAACGCGTGATATCCCAGGACAGAGAACTGGTCAGCGAAACGCTGGAAATGTTGCAAACCTGCTATCAGCAGTTGGGTAAAACTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAACCATTAAACCGATTCGCGGTCTTGATGGCCTGTAA", + "dna_sequence_length": 1170, + "functions": [ + "LPS regulatory protein", + "putative modulator of LpxC proteolysis" + ], + "id": "CDS_1263", + "location": [ + [ + "NC_000913", + 1340558, + "+", + 1170 + ] + ], + "md5": "4471d88be964d552fc2e1a1edc33eea6", + "parent_gene": "", + "protein_md5": "17f7620be9160a140f27aa0b26f6c652", + "protein_translation": "MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL", + "protein_translation_length": 389, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004304" + ], + [ + "gene_synonym", + "ECK1276" + ], + [ + "gene_synonym", + "EcoGene:EG10809" + ], + [ + "gene_synonym", + "GI:16129242" + ], + [ + "gene_synonym", + "GeneID:947121" + ], + [ + "gene_synonym", + "JW1273" + ], + [ + "gene_synonym", + "NP_415797.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08244" + ], + [ + "gene_synonym", + "b1281" + ], + [ + "gene_synonym", + "pyrF" + ] + ], + "dna_sequence": "ATGACGTTAACTGCTTCATCTTCTTCCCGCGCTGTTACGAATTCTCCTGTGGTTGTTGCCCTTGATTATCATAATCGTGATGACGCGCTGGCCTTTGTCGACAAGATCGACCCACGCGATTGTCGTCTGAAGGTCGGCAAAGAGATGTTTACATTGTTTGGGCCACAGTTTGTGCGCGAACTTCAACAGCGTGGTTTTGATATCTTTCTTGACCTGAAATTCCACGATATCCCCAACACTGCAGCGCACGCTGTCGCTGCTGCAGCTGACTTAGGCGTGTGGATGGTGAATGTTCATGCCTCTGGTGGGGCGCGTATGATGACCGCAGCGCGTGAGGCACTGGTTCCGTTTGGCAAAGATGCACCGCTTTTGATTGCTGTGACAGTGTTGACCAGCATGGAAGCCAGCGACCTGGTCGATCTTGGCATGACACTGTCACCTGCAGATTATGCAGAACGTCTGGCGGCACTGACGCAAAAATGTGGCCTTGATGGTGTGGTGTGTTCTGCTCAGGAAGCTGTGCGCTTTAAACAGGTATTCGGTCAGGAGTTCAAACTGGTTACGCCGGGCATTCGTCCGCAGGGGAGTGAAGCTGGTGACCAGCGCCGCATTATGACGCCAGAACAGGCGTTGTCGGCTGGTGTTGATTATATGGTGATTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGA", + "dna_sequence_length": 738, + "functions": [ + "orotidine-5'-phosphate decarboxylase" + ], + "id": "CDS_1264", + "location": [ + [ + "NC_000913", + 1341921, + "+", + 738 + ] + ], + "md5": "9fbccc41e8e16c7ef4f2e6c530d1654c", + "parent_gene": "", + "protein_md5": "b19d93ebd9a9cceb01f43f587d749b0f", + "protein_translation": "MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004307" + ], + [ + "gene_synonym", + "ECK1277" + ], + [ + "gene_synonym", + "EcoGene:EG11128" + ], + [ + "gene_synonym", + "GI:90111241" + ], + [ + "gene_synonym", + "GeneID:947058" + ], + [ + "gene_synonym", + "JW1274" + ], + [ + "gene_synonym", + "NP_415798.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08245" + ], + [ + "gene_synonym", + "b1282" + ], + [ + "gene_synonym", + "yciH" + ] + ], + "dna_sequence": "ATGAGTGATTCCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGCGTATTCAGCGTCAGACCAGTGGACGTAAAGGTAAGGGCGTTTGCCTGATTACCGGTGTCGATCTCGATGATGCCGAACTGACAAAACTTGCAGCGGAACTGAAGAAAAAATGCGGCTGCGGCGGAGCAGTTAAAGATGGAGTTATTGAAATCCAGGGCGATAAGCGTGATTTATTAAAATCACTACTTGAAGCGAAAGGGATGAAGGTAAAACTCGCAGGCGGTTAA", + "dna_sequence_length": 327, + "functions": [ + "initiation factor function partial mimic, SUI1 family" + ], + "id": "CDS_1265", + "location": [ + [ + "NC_000913", + 1342658, + "+", + 327 + ] + ], + "md5": "0d1dcfb7933630ad3557c29cc2aa70de", + "parent_gene": "", + "protein_md5": "3575f3e9a8fc7c545835472ec290d560", + "protein_translation": "MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004309" + ], + [ + "gene_synonym", + "ECK1278" + ], + [ + "gene_synonym", + "EcoGene:EG10679" + ], + [ + "gene_synonym", + "GI:16129244" + ], + [ + "gene_synonym", + "GeneID:945866" + ], + [ + "gene_synonym", + "JW1275" + ], + [ + "gene_synonym", + "NP_415799.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADA7" + ], + [ + "gene_synonym", + "b1283" + ], + [ + "gene_synonym", + "osmB" + ] + ], + "dna_sequence": "ATGTTTGTAACGAGCAAAAAAATGACCGCGGCTGTTCTGGCAATTACTTTGGCAATGTCTCTGAGTGCCTGTTCTAACTGGTCTAAACGGGACCGCAACACCGCAATCGGCGCGGGTGCAGGGGCATTAGGCGGTGCAGTACTGACCGATGGCAGTACGTTGGGTACATTAGGTGGTGCAGCTGTCGGAGGTGTTATTGGTCACCAGGTCGGTAAATAA", + "dna_sequence_length": 219, + "functions": [ + "osmotically and stress inducible lipoprotein" + ], + "id": "CDS_1266", + "location": [ + [ + "NC_000913", + 1343328, + "-", + 219 + ] + ], + "md5": "6c9bdc1c9d70265898dc44c12fd1e048", + "parent_gene": "", + "protein_md5": "56f79aae5057c73d4c2beb937bad2deb", + "protein_translation": "MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004312" + ], + [ + "gene_synonym", + "ECK1279" + ], + [ + "gene_synonym", + "EcoGene:EG13905" + ], + [ + "gene_synonym", + "GI:16129245" + ], + [ + "gene_synonym", + "GeneID:945869" + ], + [ + "gene_synonym", + "JW1276" + ], + [ + "gene_synonym", + "NP_415800.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76034" + ], + [ + "gene_synonym", + "b1284" + ], + [ + "gene_synonym", + "deoT" + ], + [ + "gene_synonym", + "yciT" + ] + ], + "dna_sequence": "ATGAATTCCCGACAACAAACTATTCTACAGATGGTCATTGACCAGGGTCAGGTTAGCGTAACCGATCTGGCAAAAGCCACTGGAGTTTCTGAAGTTACCATTCGCCAGGATCTCAACACACTCGAAAAACTGAGTTACCTCCGCCGTGCACATGGCTTTGCTGTTTCGCTTGATAGTGATGACGTCGAAACCCGTATGATGAGCAACTATACGCTGAAGCGTGAACTCGCCGAGTTTGCCGCGTCGCTGGTTCAACCGGGCGAAACCATCTTTATCGAAAATGGCAGCAGCAATGCCCTACTCGCCCGGACTCTGGGCGAGCAGAAGAAAAATGTCACTATCATCACGGTCAGCAGCTACATCGCGCATTTGCTGAAAGACGCGCCTTGTGAAGTTATTTTGCTCGGTGGCGTGTATCAGAAAAAAAGCGAAAGTATGGTTGGCCCTTTGACACGCCAGTGCATCCAACAGGTGCATTTCAGCAAAGCATTTATTGGTATTGATGGCTGGCAACCTGAAACTGGATTTACCGGTCGCGATATGATGCGTACCGATGTGGTCAATGCCGTGCTGGAAAAAGAGTGCGAAGCGATAGTCCTGACTGACAGCTCGAAATTTGGTGCTGTACATTCATACTCCATCGGTCCCGTTGAGCGATTCAATCGCGTGATTACCGATTCGAAAATACGCGCCAGCGATCTGATGCATCTTGAGCACAGTAAACTCACCATTCACGTCGTTGACATTTAA", + "dna_sequence_length": 750, + "functions": [ + "global regulator of transcription", + "DeoR family" + ], + "id": "CDS_1267", + "location": [ + [ + "NC_000913", + 1344346, + "-", + 750 + ] + ], + "md5": "04dfdf89c0dbf062fdd5479134d803f0", + "parent_gene": "", + "protein_md5": "40d1c91d9d8c82c082e6593dc8e5a4d3", + "protein_translation": "MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHFSKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEHSKLTIHVVDI", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4406" + ], + [ + "gene_synonym", + "EcoGene:EG14460" + ], + [ + "gene_synonym", + "GI:145698252" + ], + [ + "gene_synonym", + "GeneID:5061509" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A614" + ], + [ + "gene_synonym", + "YP_001165317.1" + ], + [ + "gene_synonym", + "b4596" + ], + [ + "gene_synonym", + "deoL" + ], + [ + "gene_synonym", + "yciZ" + ] + ], + "dna_sequence": "ATGTCTGAATTTGATGCCCAGCGCGTTGCCGAACGTATTGATATTGTGTTAGATATCCTTGTGGCAGGCGATTACCACTCTGCGATCCATAATCTCGAGATACTTAAAGCAGAACTCTTGCGCCAGGTTGCTGAATCTACGCCAGACATCCCGAAGGCACCGTGGGAGATTTAA", + "dna_sequence_length": 174, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1268", + "location": [ + [ + "NC_000913", + 1344609, + "-", + 174 + ] + ], + "md5": "b9df89ba8eebbe69c8419117aabcb5eb", + "parent_gene": "", + "protein_md5": "2f7611af1672614622d32d671b386112", + "protein_translation": "MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAESTPDIPKAPWEI", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004317" + ], + [ + "gene_synonym", + "ECK1280" + ], + [ + "gene_synonym", + "EcoGene:EG13415" + ], + [ + "gene_synonym", + "GI:16129246" + ], + [ + "gene_synonym", + "GeneID:945868" + ], + [ + "gene_synonym", + "JW1278" + ], + [ + "gene_synonym", + "NP_415801.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77334" + ], + [ + "gene_synonym", + "b1285" + ], + [ + "gene_synonym", + "gmr" + ], + [ + "gene_synonym", + "yciR" + ] + ], + "dna_sequence": "ATGAAAACCGTTAGGGAGTCCACAACGTTGTACAACTTTCTCGGATCGCACAATCCATACTGGCGGTTGACGGAAAGCAGCGATGTTTTGCGCTTTTCTACCACCGAAACCACAGAACCTGATCGTACATTGCAGTTATCTGCCGAACAGGCTGCTCGCATCAGGGAAATGACGGTCATCACCTCCAGCCTGATGATGAGTCTGACCGTCGATGAAAGCGATCTTTCTGTGCATCTGGTAGGACGAAAAATCAATAAACGGGAATGGGCTGGCAACGCGTCTGCATGGCATGACACACCGGCGGTTGCTCGTGATTTATCACACGGGCTTTCCTTTGCTGAGCAGGTAGTTTCTGAAGCACATTCCGCAATAGTGATTCTCGACAGCCGGGGGAATATCCAACGCTTCAATCGGTTATGTGAAGATTACACAGGGTTGAAAGAACACGACGTCATTGGGCAAAGCGTGTTTAAACTGTTTATGAGCCGTCGTGAAGCTGCGGCATCCAGGCGCAATAACCGTGTATTTTTTCGAAGCGGCAATGCATATGAAGTCGAACTGTGGATACCAACATGTAAAGGCCAGCGGCTGTTTCTGTTTCGCAATAAATTTGTCCACAGCGGCAGTGGCAAAAACGAGATTTTTTTAATCTGTTCCGGCACCGACATTACCGAAGAGCGCCGCGCTCAGGAGCGACTGCGTATTCTGGCAAATACCGACAGTATCACCGGACTGCCGAATCGTAACGCAATGCAGGATTTAATCGATCACGCTATTAATCATGCAGATAACAATAAAGTTGGGGTTGTGTATCTTGATTTGGATAATTTCAAAAAGGTCAACGACGCCTATGGGCATTTGTTTGGTGACCAGTTATTACGCGACGTGTCATTGGCTATTTTAAGCTGTCTCGAACATGACCAGGTGTTGGCGCGTCCAGGTGGGGATGAGTTTCTGGTACTGGCATCCAACACCTCACAAAGCGCGCTGGAAGCAATGGCATCACGAATTTTGACCCGCTTACGGCTCCCCTTTCGCATTGGTTTAATTGAAGTTTATACCAGCTGTTCAGTAGGTATTGCACTCTCTCCCGAACATGGTTCAGACAGCACGGCTATTATTCGTCACGCCGACACAGCAATGTACACAGCGAAGGAAGGCGGACGAGGACAATTTTGCGTTTTTACCCCAGAAATGAATCAACGGGTATTTGAATATCTCTGGCTGGATACCAACTTGCGTAAAGCACTGGAAAACGATCAGTTGGTTATTCACTATCAACCGAAAATCACCTGGCGTGGCGAAGTGCGCAGTCTGGAAGCACTAGTACGTTGGCAGTCACCTGAACGTGGGTTGATTCCACCGTTGGACTTCATTTCCTACGCCGAAGAGTCAGGGCTAATTGTGCCTTTAGGCCGTTGGGTGATTCTCGATGTCGTACGCCAGGTGGCAAAGTGGCGGGATAAAGGCATAAACCTGCGAGTGGCGGTAAATATTTCTGCACGTCAGCTCGCCGATCAAACCATTTTCACCGCCCTGAAACAGGTTCTCCAGGAACTCAATTTTGAATACTGCCCTATAGATGTTGAACTGACAGAGAGTTGTCTGATTGAGAATGATGAACTGGCACTGTCTGTTATTCAACAATTTAGCCAACTAGGTGCGCAAGTGCATCTGGATGATTTTGGTACCGGCTACTCTTCACTTTCGCAACTGGCGCGCTTTCCGATCGATGCCATCAAACTTGACCAGGTTTTTGTTCGAGATATTCACAAACAACCTGTCTCGCAGTCACTGGTCCGGGCGATCGTCGCTGTGGCCCAGGCATTGAATCTTCAGGTGATCGCCGAAGGTGTAGAGAGTGCAAAGGAAGATGCTTTTTTAACCAAGAACGGGATCAATGAGCGGCAAGGATTTTTGTTTGCCAAACCGATGCCCGCCGTCGCCTTCGAACGCTGGTATAAACGCTATCTGAAGCGCGCATAA", + "dna_sequence_length": 1986, + "functions": [ + "cyclic-di-GMP phosphodiesterase", + "csgD regulator", + "modulator of RNase II stability" + ], + "id": "CDS_1269", + "location": [ + [ + "NC_000913", + 1346742, + "-", + 1986 + ] + ], + "md5": "8fb81690e18a349568516922b7343678", + "parent_gene": "", + "protein_md5": "8f65242958e6ed927ac8030fe50f5c35", + "protein_translation": "MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA", + "protein_translation_length": 661, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4487" + ], + [ + "gene_synonym", + "EcoGene:EG14477" + ], + [ + "gene_synonym", + "GI:226524710" + ], + [ + "gene_synonym", + "GeneID:7751616" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P5Z9" + ], + [ + "gene_synonym", + "YP_002791239.1" + ], + [ + "gene_synonym", + "b4672" + ], + [ + "gene_synonym", + "ymiB" + ] + ], + "dna_sequence": "ATGACTTACATGAAATTAACGGCGGCTAAACGCATTGTTTTTTTTATATATTTATTTGTAATCCAGTTTTGGAAAAACGCCAGTTTTCAAACGAAAGTCAGTTAA", + "dna_sequence_length": 105, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1270", + "location": [ + [ + "NC_000913", + 1346796, + "+", + 105 + ] + ], + "md5": "11d0b2931c85f4badcb5657e14ef5f97", + "parent_gene": "", + "protein_md5": "4ffc5bca16d1fe1754e1887dc44dc6ff", + "protein_translation": "MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS", + "protein_translation_length": 34, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004320" + ], + [ + "gene_synonym", + "ECK1281" + ], + [ + "gene_synonym", + "EcoGene:EG11620" + ], + [ + "gene_synonym", + "GI:16129247" + ], + [ + "gene_synonym", + "GeneID:945864" + ], + [ + "gene_synonym", + "JW1279" + ], + [ + "gene_synonym", + "NP_415802.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30850" + ], + [ + "gene_synonym", + "b1286" + ], + [ + "gene_synonym", + "rnb" + ] + ], + "dna_sequence": "ATGTTTCAGGACAACCCGCTGCTAGCGCAGCTTAAACAGCAACTGCATTCCCAGACGCCACGCGCTGAAGGGGTGGTAAAAGCCACAGAAAAAGGCTTTGGCTTCCTGGAAGTCGACGCGCAAAAAAGTTATTTCATTCCGCCGCCGCAGATGAAAAAAGTCATGCATGGCGACCGAATTATCGCGGTGATCCACAGTGAAAAAGAACGTGAATCCGCAGAGCCAGAAGAACTGGTTGAACCGTTCCTGACTCGTTTCGTGGGTAAGGTTCAGGGCAAAAATGACCGTCTGGCCATCGTTCCTGATCATCCACTCTTAAAAGACGCCATTCCTTGCCGCGCAGCCCGTGGCCTGAACCACGAGTTTAAAGAAGGCGACTGGGCGGTTGCCGAAATGCGCCGTCATCCGCTGAAAGGCGATCGTTCTTTCTATGCAGAACTGACACAATACATCACTTTTGGTGACGATCACTTTGTACCGTGGTGGGTTACCCTTGCACGCCATAATCTGGAAAAAGAAGCACCAGACGGCGTCGCTACCGAAATGCTCGATGAAGGTCTGGTTCGTGAAGATCTGACCGCGCTGGATTTTGTCACCATCGACAGTGCCAGCACAGAAGATATGGATGACGCCCTTTTCGCTAAGGCGTTGCCGGATGACAAACTTCAGCTGATTGTGGCGATTGCCGATCCAACCGCGTGGATTGCTGAAGGCAGCAAGCTGGACAAAGCCGCGAAAATTCGCGCATTCACCAACTATCTGCCTGGCTTCAACATCCCTATGCTGCCTCGCGAGCTTTCTGACGATCTCTGCTCACTGCGCGCCAATGAAGTCCGCCCGGTACTGGCATGCCGCATGACGCTCTCCGCTGATGGCACCATTGAAGATAATATCGAATTCTTTGCCGCCACCATCGAATCCAAAGCAAAGCTGGTGTATGACCAGGTTTCTGACTGGCTGGAAAATACCGGTGACTGGCAGCCTGAAAGTGAAGCAATTGCCGAACAAGTCCGTTTGCTAGCGCAAATTTGCCAACGCCGCGGCGAGTGGCGTCATAACCACGCACTGGTGTTTAAAGATCGCCCGGATTACCGCTTTATTCTCGGTGAAAAAGGTGAAGTGCTGGATATCGTCGCCGAGCCTCGTCGCATTGCCAACCGTATCGTCGAAGAAGCGATGATTGCCGCTAACATTTGTGCGGCCCGCGTACTGCGCGATAAGCTCGGTTTTGGCATCTATAACGTGCATATGGGCTTTGATCCGGCGAATGCCGACGCGCTGGCAGCGTTGCTGAAAACGCACGGTCTGCATGTCGATGCCGAAGAAGTGCTCACGCTGGACGGTTTCTGCAAACTGCGTCGTGAACTGGACGCGCAACCAACTGGTTTCCTCGACAGCCGCATTCGTCGCTTCCAGTCATTTGCTGAAATTAGCACTGAACCCGGTCCTCACTTTGGCCTCGGTCTGGAAGCATACGCCACCTGGACTTCGCCGATCCGTAAATATGGCGACATGATCAACCACCGTCTGCTGAAAGCGGTTATCAAAGGCGAAACTGCGACGCGCCCACAGGATGAAATCACTGTCCAAATGGCCGAGCGTCGCCGTCTCAACCGGATGGCAGAACGTGATGTTGGTGACTGGTTATACGCACGCTTCCTGAAAGACAAAGCCGGGACCGACACCCGTTTCGCAGCGGAAATTGTCGATATCAGCCGTGGCGGCATGCGTGTTCGTTTGGTTGATAACGGCGCTATCGCCTTTATTCCGGCACCTTTCTTACACGCTGTGCGCGATGAACTGGTTTGCAGCCAGGAAAACGGCACTGTACAAATTAAAGGTGAAACGGTTTACAAAGTGACTGACGTTATTGACGTCACTATTGCCGAAGTCCGCATGGAAACCCGCAGCATTATTGCGCGCCCGGTCGCGTAA", + "dna_sequence_length": 1935, + "functions": [ + "ribonuclease II" + ], + "id": "CDS_1271", + "location": [ + [ + "NC_000913", + 1348912, + "-", + 1935 + ] + ], + "md5": "56733c38040d8896aea7ee92a490091f", + "parent_gene": "", + "protein_md5": "2d2602635040cf648349e31eaa98ca1d", + "protein_translation": "MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA", + "protein_translation_length": 644, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004322" + ], + [ + "gene_synonym", + "ECK1282" + ], + [ + "gene_synonym", + "EcoGene:EG14262" + ], + [ + "gene_synonym", + "GI:90111242" + ], + [ + "gene_synonym", + "GeneID:945859" + ], + [ + "gene_synonym", + "JW5200" + ], + [ + "gene_synonym", + "NP_415803.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76035" + ], + [ + "gene_synonym", + "b1287" + ], + [ + "gene_synonym", + "yciW" + ] + ], + "dna_sequence": "ATGGAACAACGCCACATCACCGGCAAAAGCCACTGGTATCATGAAACGCAATCCAGTACTACGGAGTATGACGTTCTGCCTCTGGTCCCGGAAGCCGCAAAGGTCAGCGATCCCTTTCTACTCGACGTGATCCTTGAAAAAGAAACGCTGGCCCCCTTCCTTTCATGGCTGGACCCTGCGCGTGTTCTTGCAGTGGATTTGTTCCCTGACCAGCTTACCGTGACCCGTTCACAGACCTTCACCGCTTATGAACGCTTGTCGACGGCCCTGACGGTTGCTCAGGTTTGCGGCGTCCAGCGGTTATGTAACTACTATTCGGCGCGACTTACGCCGCTCCCCGGGCCTGATTCCACCAGGGAAAGTAATCATCGGTTGGCACAAATCACGCAATATGCCCGCCAACTGGCTAGCTCGCCTTCTATTATCGACAACCGATCGCGCCAGCATCTGAATGACGTCGGTCTTACTGCCTGGGACTGTGTGATCATTAGCCAAATCATTGGTTTTATTGGCTTTCAGGCGCGGACAATTGCGACATTTCAGGCTTATCTCGGGCATCCGGTACGCTGGTTACCCGGGCTGGAGATACAAAACTACGCCGACGCGTCACTGTTTGCTGATGAATCATTACGCTGGCGAAGCAGCTATGAGGTGGAAAAACTACCTGAAGAGCACACAAAAAGTTCAACTGCAGAACTTTGCCAACTGGCCGAAATACTCTCTCTCCACCCTATTTCACTTTCCCTTCTCGAAAAGTTGTTAAACAGCACACGGGGCAATACACAGCCGGATAATCAGCTTGCGGCGTTGTTATGCGCGCGTATAAATGGCAGTCCTGCTTGTTTTGCCACCTGTATGGATTCATCAAATGAATATAAAAAAATCAGCACCCTTATGCGCAAGGGCGAAAATGAAATTAACCAATGGGCTGACCGTCATTCTGTTGAGCGCGCTACCGTTCAGGCGATACAATGGCTGACCCGAGCACCCGATCGCTTTAGCGCCGCCCAGTTCAGCCCTTTACTCGAACACGAAAAATCATCAACGCAGATTATTAATCTGCTGGTATGGAGCGGGCTGTGTGGCTGGATAAATCGCTTAAAAATCGCGTTGGGTGAGACATATTAA", + "dna_sequence_length": 1128, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1272", + "location": [ + [ + "NC_000913", + 1350107, + "-", + 1128 + ] + ], + "md5": "3580a2dca77f808023cda216cd92e3ec", + "parent_gene": "", + "protein_md5": "992c7121fd7b92a33849ca8a9138e991", + "protein_translation": "MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVDLFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIISQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEILSLHPISLSLLEKLLNSTRGNTQPDNQLAALLCARINGSPACFATCMDSSNEYKKISTLMRKGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004327" + ], + [ + "gene_synonym", + "ECK1283" + ], + [ + "gene_synonym", + "EcoGene:EG11528" + ], + [ + "gene_synonym", + "GI:16129249" + ], + [ + "gene_synonym", + "GeneID:945870" + ], + [ + "gene_synonym", + "JW1281" + ], + [ + "gene_synonym", + "NP_415804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEK4" + ], + [ + "gene_synonym", + "b1288" + ], + [ + "gene_synonym", + "envM" + ], + [ + "gene_synonym", + "fabI" + ], + [ + "gene_synonym", + "gts" + ], + [ + "gene_synonym", + "qmeA" + ] + ], + "dna_sequence": "ATGGGTTTTCTTTCCGGTAAGCGCATTCTGGTAACCGGTGTTGCCAGCAAACTATCCATCGCCTACGGTATCGCTCAGGCGATGCACCGCGAAGGAGCTGAACTGGCATTCACCTACCAGAACGACAAACTGAAAGGCCGCGTAGAAGAATTTGCCGCTCAATTGGGTTCTGACATCGTTCTGCAGTGCGATGTTGCAGAAGATGCCAGCATCGACACCATGTTCGCTGAACTGGGGAAAGTTTGGCCGAAATTTGACGGTTTCGTACACTCTATTGGTTTTGCACCTGGCGATCAGCTGGATGGTGACTATGTTAACGCCGTTACCCGTGAAGGCTTCAAAATTGCCCACGACATCAGCTCCTACAGCTTCGTTGCAATGGCAAAAGCTTGCCGCTCCATGCTGAATCCGGGTTCTGCCCTGCTGACCCTTTCCTACCTTGGCGCTGAGCGCGCTATCCCGAACTACAACGTTATGGGTCTGGCAAAAGCGTCTCTGGAAGCGAACGTGCGCTATATGGCGAACGCGATGGGTCCGGAAGGTGTGCGTGTTAACGCCATCTCTGCTGGTCCGATCCGTACTCTGGCGGCCTCCGGTATCAAAGACTTCCGCAAAATGCTGGCTCATTGCGAAGCCGTTACCCCGATTCGCCGTACCGTTACTATTGAAGATGTGGGTAACTCTGCGGCATTCCTGTGCTCCGATCTCTCTGCCGGTATCTCCGGTGAAGTGGTCCACGTTGACGGCGGTTTCAGCATTGCTGCAATGAACGAACTCGAACTGAAATAA", + "dna_sequence_length": 789, + "functions": [ + "enoyl-[acyl-carrier-protein] reductase, NADH-dependent" + ], + "id": "CDS_1273", + "location": [ + [ + "NC_000913", + 1351039, + "-", + 789 + ] + ], + "md5": "70f8248c81de9b519e3cd55216454e2d", + "parent_gene": "", + "protein_md5": "17517a241b56a96f753c1748f4deac12", + "protein_translation": "MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004333" + ], + [ + "gene_synonym", + "ECK1284" + ], + [ + "gene_synonym", + "EcoGene:EG12653" + ], + [ + "gene_synonym", + "GI:16129250" + ], + [ + "gene_synonym", + "GeneID:945871" + ], + [ + "gene_synonym", + "JW1282" + ], + [ + "gene_synonym", + "NP_415805.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45736" + ], + [ + "gene_synonym", + "b1289" + ], + [ + "gene_synonym", + "ycjD" + ] + ], + "dna_sequence": "GTGATAGATAAAATTAAATCAAATGCGCGTGATTTAAGACGCAATCTCACTTTGCAGGAACGAAAGCTCTGGCGATATCTTCGCAGCCGACGTTTTAGTGATTTCAAATTTCGCCGTCAACATCCAGTGGGGAGCTACATTCTCGATTTTGCTTGCTGCTCGGCGCGTGTAGTCGTTGAGCTGGATGGTGGGCAGCATGATTTAGCAGTTGCCTATGATTCCAGGCGCACTAGCTGGCTTGAGTCGCAGGGCTGGACCGTGCTGCGTTTCTGGAATAACGAGATTGATTGTAATGAGGAGACGGTGCTGGAGAATATTCTGCAGGAACTGAACCGCCGGTCACCCTCTCCCTGA", + "dna_sequence_length": 354, + "functions": [ + "DUF559 family endonuclease-related protein" + ], + "id": "CDS_1274", + "location": [ + [ + "NC_000913", + 1351760, + "-", + 354 + ] + ], + "md5": "165d8d5e89f44f673da4e5033ab2d1d4", + "parent_gene": "", + "protein_md5": "61e102d9979cd9b763b6ad3be17d032f", + "protein_translation": "MIDKIKSNARDLRRNLTLQERKLWRYLRSRRFSDFKFRRQHPVGSYILDFACCSARVVVELDGGQHDLAVAYDSRRTSWLESQGWTVLRFWNNEIDCNEETVLENILQELNRRSPSP", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004339" + ], + [ + "gene_synonym", + "ECK1285" + ], + [ + "gene_synonym", + "EcoGene:EG12305" + ], + [ + "gene_synonym", + "GI:16129251" + ], + [ + "gene_synonym", + "GeneID:945335" + ], + [ + "gene_synonym", + "JW1283" + ], + [ + "gene_synonym", + "NP_415806.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAH8" + ], + [ + "gene_synonym", + "b1290" + ], + [ + "gene_synonym", + "sapF" + ] + ], + "dna_sequence": "ATGATCGAAACGCTGCTTGAAGTGCGTAATTTAAGTAAAACGTTCCGCTACCGGACCGGCTGGTTTCGTCGTCAGACCGTAGAAGCGGTAAAACCCTTGAGCTTTACGCTACGTGAAGGCCAGACACTGGCGATTATTGGCGAGAATGGTTCGGGTAAATCCACGCTGGCAAAAATGCTGGCGGGAATGATAGAGCCTACCAGCGGCGAGTTATTGATTGACGATCATCCACTGCATTTTGGCGATTATTCCTTCCGCAGTCAGCGTATTCGCATGATTTTTCAGGATCCTTCGACCTCGTTGAATCCCCGTCAACGTATCTCGCAAATTCTGGATTTTCCACTGCGCCTGAACACCGACCTGGAACCGGAACAGCGTCGCAAACAGATTATTGAAACGATGCGTATGGTTGGGCTGCTACCGGATCACGTCAGTTACTATCCGCATATGTTGGCACCCGGACAAAAACAGCGTCTGGGTCTGGCGCGCGCGCTGATATTGCGCCCAAAAGTCATTATTGCCGATGAAGCCCTCGCTTCACTGGATATGTCGATGCGTTCGCAGTTGATTAATCTGATGCTGGAATTACAGGAAAAACAGGGCATTTCGTATATTTATGTTACCCAGCATATCGGAATGATGAAGCACATTAGCGACCAGGTGCTGGTGATGCATCAGGGCGAGGTTGTCGAGCGAGGCAGCACCGCGGATGTGCTGGCATCGCCGCTGCATGAACTCACCAAACGGCTGATTGCCGGTCATTTTGGCGAGGCATTGACGGCGGATGCGTGGCGTAAAGATCGCTAA", + "dna_sequence_length": 807, + "functions": [ + "antimicrobial peptide ABC transporter ATPase" + ], + "id": "CDS_1275", + "location": [ + [ + "NC_000913", + 1352634, + "-", + 807 + ] + ], + "md5": "0d7a20afb1762a86b2d799fcdb1bbaf9", + "parent_gene": "", + "protein_md5": "5b86580b2e5935cabca91c91c0a12f7b", + "protein_translation": "MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004342" + ], + [ + "gene_synonym", + "ECK1286" + ], + [ + "gene_synonym", + "EcoGene:EG12304" + ], + [ + "gene_synonym", + "GI:16129252" + ], + [ + "gene_synonym", + "GeneID:946203" + ], + [ + "gene_synonym", + "JW1284" + ], + [ + "gene_synonym", + "NP_415807.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAH4" + ], + [ + "gene_synonym", + "b1291" + ], + [ + "gene_synonym", + "sapD" + ], + [ + "gene_synonym", + "trkE" + ] + ], + "dna_sequence": "ATGCCATTACTCGATATTCGTAACCTGACCATTGAATTTAAAACCGGTGATGAGTGGGTTAAAGCCGTCGACCGGGTAAGTATGACCTTAACCGAAGGTGAAATCCGCGGTCTTGTTGGTGAATCCGGTTCCGGCAAGAGTTTGATTGCGAAAGCGATTTGTGGGGTGAATAAAGATAACTGGCGTGTTACTGCTGACCGTATGCGTTTTGATGATATCGATTTGCTGCGTCTCTCCGCACGCGAACGGCGCAAACTGGTTGGCCATAACGTGTCGATGATTTTCCAGGAACCGCAGTCGTGTCTTGACCCTTCAGAACGTGTGGGCCGCCAGTTGATGCAAAACATCCCAGCCTGGACCTATAAAGGCCGTTGGTGGCAGCGTTTTGGCTGGCGCAAACGCCGTGCCATTGAACTGCTGCACCGCGTGGGGATTAAAGATCACAAAGATGCGATGCGCAGTTTTCCCTATGAGTTGACCGAAGGTGAATGTCAGAAAGTGATGATAGCCATTGCACTGGCGAATCAACCGCGTCTGCTGATTGCTGACGAACCGACCAACTCAATGGAGCCAACAACCCAGGCGCAAATCTTTCGCCTGCTGACGCGTCTCAACCAAAACAGCAATACCACTATTTTGCTTATCAGCCATGACTTACAAATGCTTAGCCAATGGGCGGATAAAATTAACGTGCTTTACTGCGGTCAAACAGTGGAAACCGCGCCGAGTAAGGAGTTGGTGACGATGCCACATCATCCTTATACCCAGGCGCTGATCCGCGCGATACCAGACTTCGGCAGCGCGATGCCGCATAAAAGTCGCCTCAATACGCTGCCCGGCGCTATCCCACTGCTGGAACAGTTACCGATTGGTTGTCGTCTGGGGCCACGTTGCCCGTATGCACAACGAGAATGCATTGTGACGCCACGTTTGACGGGGGCGAAAAATCATCTCTATGCCTGTCATTTCCCGCTGAACATGGAGAAAGAGTGA", + "dna_sequence_length": 993, + "functions": [ + "antimicrobial peptide ABC transporter ATPase" + ], + "id": "CDS_1276", + "location": [ + [ + "NC_000913", + 1353628, + "-", + 993 + ] + ], + "md5": "fcd0807cf1b39a97b08aa779a424c8b8", + "parent_gene": "", + "protein_md5": "8363268fa7b8ab3c96eca838750c1a4c", + "protein_translation": "MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004348" + ], + [ + "gene_synonym", + "ECK1287" + ], + [ + "gene_synonym", + "EcoGene:EG20256" + ], + [ + "gene_synonym", + "GI:16129253" + ], + [ + "gene_synonym", + "GeneID:945266" + ], + [ + "gene_synonym", + "JW1285" + ], + [ + "gene_synonym", + "NP_415808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGH5" + ], + [ + "gene_synonym", + "b1292" + ], + [ + "gene_synonym", + "sapC" + ] + ], + "dna_sequence": "ATGCCTTACGATAGCGTATACAGCGAAAAGCGCCCGCCGGGCACGCTGCGTACCGCCTGGCGCAAATTTTATAGTGACGCCTCTGCGATGGTCGGCCTGTACGGCTGCGCGGGGCTGGCTGTACTGTGTATTTTTGGCGGCTGGTTTGCGCCTTACGGCATCGACCAGCAATTTCTCGGTTATCAATTATTGCCGCCGTCATGGTCGCGCTATGGCGAAGTTTCTTTCTTCCTGGGGACTGACGACCTCGGACGCGATGTTTTAAGCCGTTTACTGAGCGGAGCTGCGCCAACCGTGGGTGGCGCATTTGTGGTGACGCTTGCCGCGACGATCTGTGGCCTGGTACTGGGCACCTTCGCCGGGGCGACACACGGCCTCCGCTCAGCGGTGCTTAACCATATTCTGGATACCTTACTGGCGATCCCTTCGCTGCTGTTGGCAATTATCGTTGTAGCGTTTGCCGGACCGAGTTTGTCCCACGCTATGTTTGCTGTCTGGCTGGCATTGCTGCCGCGTATGGTACGTTCGATTTACAGCATGGTGCATGACGAACTGGAAAAAGAGTACGTTATCGCCGCCCGTCTGGATGGCGCATCAACGCTGAATATTCTCTGGTTTGCTGTGATGCCAAACATCACCGCCGGGCTGGTCACCGAGATCACCCGCGCACTGTCGATGGCAATTCTCGATATCGCCGCGCTGGGCTTTCTCGATCTCGGCGCACAACTCCCCTCGCCTGAATGGGGAGCGATGCTCGGTGATGCGCTGGAACTGATTTATGTCGCCCCGTGGACTGTCATGCTGCCAGGTGCGGCAATTATGATTAGCGTGTTGTTGGTTAACCTCCTTGGCGATGGCGTTCGTCGTGCGATTATTGCGGGGGTGGAATAA", + "dna_sequence_length": 891, + "functions": [ + "antimicrobial peptide transport ABC transporter permease" + ], + "id": "CDS_1277", + "location": [ + [ + "NC_000913", + 1354518, + "-", + 891 + ] + ], + "md5": "8c58037efdc3ecbad00de327325252a5", + "parent_gene": "", + "protein_md5": "7b1f50fbc9eeb38883ab3222adb10ef5", + "protein_translation": "MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004350" + ], + [ + "gene_synonym", + "ECK1288" + ], + [ + "gene_synonym", + "EcoGene:EG20255" + ], + [ + "gene_synonym", + "GI:16129254" + ], + [ + "gene_synonym", + "GeneID:946191" + ], + [ + "gene_synonym", + "JW1286" + ], + [ + "gene_synonym", + "NP_415809.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGH3" + ], + [ + "gene_synonym", + "b1293" + ], + [ + "gene_synonym", + "sapB" + ] + ], + "dna_sequence": "ATGATTATCTTCACCTTACGCCGCATTTTGTTATTGATTGTCACCTTGTTCCTGCTGACCTTCGTTGGCTTCAGCTTGAGCTATTTCACCCCTCATGCGCCGTTACAAGGCGCGTCACTGTGGAATGCCTGGGTGTTCTGGTTTAACGGCCTGATCCACTGGGATTTTGGTGTTTCCAGCATTAACGGTCAACCGATTGCCGAACAGTTAAAAGAGGTCTTCCCGGCGACGATGGAACTGTGCATCCTCGCCTTCGGTTTTGCGCTGATTGTTGGCATCCCCGTGGGGATGATTGCCGGGATTACGCGCCATAAGTGGCAGGATAACTTGATCAACGCCATCGCCTTACTGGGCTTTTCAATCCCGGTGTTCTGGCTGGCGCTTCTGTTGACGCTGTTTTGTTCACTCACGCTAGGTTGGTTGCCCGTTTCAGGGCGTTTCGATCTGCTCTACGAAGTGAAACCGATTACCGGTTTTGCGTTGATTGATGCCTGGCTTTCGGACTCACCATGGCGGGATGAAATGATCATGAGCGCAATCCGCCATATGATATTGCCCGTGATCACCCTGTCGGTTGCGCCAACAACTGAAGTGATCCGCCTGATGCGTATCAGCACTATCGAAGTGTATGACCAGAACTATGTAAAAGCGGCGGCGACCCGCGGTTTGTCGCGCTTTACTATTTTGCGTCGCCACGTTCTGCATAACGCGTTACCGCCGGTTATTCCTCGCCTGGGCTTACAGTTTTCCACCATGCTGACGCTGGCGATGATCACCGAAATGGTTTTTAGCTGGCCGGGTTTAGGGCGCTGGTTAATTAACGCCATCCGCCAGCAGGATTACGCAGCCATTTCCGCCGGAGTGATGGTGTGTGGCTCACTGGTCATTATTGTTAACGTGATTTCTGATATTTTGGGTGCCATGGCTAACCCTCTGAAACATAAGGAATGGTATGCCTTACGATAG", + "dna_sequence_length": 966, + "functions": [ + "antimicrobial peptide transport ABC transporter permease" + ], + "id": "CDS_1278", + "location": [ + [ + "NC_000913", + 1355470, + "-", + 966 + ] + ], + "md5": "39faba8c4ea19226e7b4f2a35889dbdc", + "parent_gene": "", + "protein_md5": "c7cf9937eba6d834978ea868779e2a73", + "protein_translation": "MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004354" + ], + [ + "gene_synonym", + "ECK1289" + ], + [ + "gene_synonym", + "EcoGene:EG20254" + ], + [ + "gene_synonym", + "GI:16129255" + ], + [ + "gene_synonym", + "GeneID:945873" + ], + [ + "gene_synonym", + "JW1287" + ], + [ + "gene_synonym", + "NP_415810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47622" + ], + [ + "gene_synonym", + "b1294" + ], + [ + "gene_synonym", + "sapA" + ] + ], + "dna_sequence": "ATGCGCCAGGTATTATCGTCTCTTTTGGTGATTGCTGGACTTGTGAGTGGTCAGGCAATCGCCGCGCCTGAATCTCCCCCGCATGCTGATATCCGCGACAGCGGTTTTGTCTATTGCGTCAGCGGGCAAGTCAACACCTTTAACCCATCCAAAGCGAGCAGTGGGTTAATTGTCGATACCCTTGCCGCCCAGTTTTATGATCGACTGCTGGATGTCGATCCCTATACCTATCGCCTGATGCCGGAACTTGCCGAAAGCTGGGAAGTACTCGACAACGGCGCGACCTATCGCTTCCACCTGCGTCGCGATGTTCCGTTTCAAAAAACCGACTGGTTTACTCCCACTCGTAAAATGAATGCCGACGATGTGGTGTTTACCTTCCAGCGAATTTTTGACCGCAACAACCCGTGGCATAACGTCAACGGCAGCAACTTCCCCTACTTCGACAGCCTGCAATTTGCCGATAACGTGAAAAGCGTCCGCAAACTGGATAATCATACCGTTGAGTTCCGACTCGCCCAGCCGGATGCTTCTTTTTTGTGGCACCTCGCAACCCATTATGCTTCGGTCATGTCGGCAGAATATGCCCGGAAGTTAGAGAAAGAAGATCGCCAGGAGCAACTCGACCGTCAACCGGTCGGCACCGGTCCGTATCAGTTGTCGGAATACCGCGCCGGGCAATTTATTCGCCTACAACGTCATGATGACTTCTGGCGCGGTAAACCGTTAATGCCGCAGGTAGTGGTGGATTTAGGCTCCGGCGGCACCGGACGTCTGTCGAAACTCCTGACCGGGGAATGCGACGTTCTGGCCTGGCCTGCTGCCAGCCAGCTATCCATTTTGCGTGACGACCCGCGCTTGCGTTTAACGCTGCGTCCTGGGATGAACGTCGCCTATCTGGCATTTAACACCGCCAAACCGCCGCTAAATAATCCCGCTGTCCGCCATGCGCTGGCACTGGCGATTAATAACCAGCGCCTGATGCAATCCATCTATTATGGTACGGCTGAAACGGCGGCCTCTATTTTACCGCGCGCCTCGTGGGCCTATGACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCACACGTTCGCAGGCGTGGAACCCCAGTCCACTGAAAACTGCCGAACTGATTCAGGCGGATATGGCGCAGGTTGGCGTAAAAGTGGTGATTGTGCCGGTAGAAGGTCGCTTTCAGGAGGCGCGGTTGATGGATATGAGCCATGATCTGACGTTATCCGGTTGGGCGACGGACAGTAACGACCCGGACAGTTTCTTCCGTCCGTTACTGAGCTGCGCGGCAATTCATTCGCAGACCAACCTCGCCCACTGGTGCGATCCGAAATTCGACAGCGTATTGCGTAAGGCGCTCTCTTCGCAGCAGCTGGCGGCGCGTATTGAAGCCTATGACGAAGCGCAGAGTATTCTGGCGCAGGAATTGCCCATTTTGCCGCTGGCGTCGTCATTGCGTTTGCAGGCCTATCGGTACGATATCAAAGGTCTGGTACTTAGCCCGTTTGGTAACGCCTCCTTTGCTGGGGTGTATCGCGAGAAACAGGATGAGGTGAAAAAACCATGA", + "dna_sequence_length": 1644, + "functions": [ + "antimicrobial peptide transport ABC transporter periplasmic binding protein" + ], + "id": "CDS_1279", + "location": [ + [ + "NC_000913", + 1357110, + "-", + 1644 + ] + ], + "md5": "0cf08a93a9145426b7c09c8f7f137acb", + "parent_gene": "", + "protein_md5": "3a35ecfae93ed0f514fe6665bc105bdc", + "protein_translation": "MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYNPAKSREQLKSLGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP", + "protein_translation_length": 547, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004359" + ], + [ + "gene_synonym", + "ECK1290" + ], + [ + "gene_synonym", + "EcoGene:EG14295" + ], + [ + "gene_synonym", + "GI:16129256" + ], + [ + "gene_synonym", + "GeneID:945874" + ], + [ + "gene_synonym", + "JW1288" + ], + [ + "gene_synonym", + "NP_415811.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV8" + ], + [ + "gene_synonym", + "b1295" + ], + [ + "gene_synonym", + "ymjA" + ] + ], + "dna_sequence": "ATGAACCACGATATCCCGCTAAAATATTTTGATATTGCCGATGAGTACGCGACCGAATGCGCAGAGCCTGTCGCAGAGGCTGAACGCACACCGCTGGCCCACTACTTCCAGTTACTGCTCACCCGTTTGATGAACAATGAAGAGATCAGCGAAGAAGCCCAACATGAAATGGCTGCTGAAGCGGGGATTAATCCCGTACGCATTGATGAGATCGCAGAGTTTTTGAATCAATGGGGTAATGAGTAA", + "dna_sequence_length": 246, + "functions": [ + "DUF2543 family protein" + ], + "id": "CDS_1280", + "location": [ + [ + "NC_000913", + 1357668, + "-", + 246 + ] + ], + "md5": "68af5be661fb5e7b685f4b8778a60247", + "parent_gene": "", + "protein_md5": "247eb2cf2ab89ef911db325da65c592b", + "protein_translation": "MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004362" + ], + [ + "gene_synonym", + "ECK1291" + ], + [ + "gene_synonym", + "EcoGene:EG13907" + ], + [ + "gene_synonym", + "GI:90111243" + ], + [ + "gene_synonym", + "GeneID:946287" + ], + [ + "gene_synonym", + "JW1289" + ], + [ + "gene_synonym", + "NP_415812.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76037" + ], + [ + "gene_synonym", + "b1296" + ], + [ + "gene_synonym", + "puuP" + ], + [ + "gene_synonym", + "ycjJ" + ] + ], + "dna_sequence": "ATGGCTATTAATTCACCACTGAATATTGCTGCGCAACCCGGCAAAACCCGTCTGCGAAAATCACTGAAATTGTGGCAGGTGGTGATGATGGGTCTGGCCTATCTCACGCCGATGACCGTATTTGATACTTTTGGTATTGTCTCCGGCATTAGCGACGGTCACGTTCCGGCGTCCTATTTGCTGGCGCTGGCGGGTGTGCTGTTTACCGCTATCAGCTACGGCAAACTGGTTCGCCAGTTTCCGGAGGCCGGTTCGGCCTATACCTACGCGCAAAAGTCGATTAACCCGCACGTCGGATTTATGGTCGGCTGGTCATCGCTGCTGGATTATCTCTTTTTGCCGATGATTAACGTCTTGTTGGCGAAAATCTATCTCTCCGCCCTCTTCCCGGAAGTGCCGCCGTGGGTGTGGGTGGTAACCTTCGTCGCCATTTTAACCGCCGCGAATCTGAAGAGCGTCAACCTGGTCGCTAACTTCAATACCCTGTTTGTACTGGTGCAAATCTCCATCATGGTGGTGTTTATCTTCCTGGTAGTTCAGGGACTGCATAAAGGAGAAGGCGTTGGCACCGTCTGGTCACTTCAGCCGTTTATCAGCGAGAACGCGCACCTGATCCCGATTATTACCGGGGCGACGATTGTCTGTTTCTCCTTCCTCGGTTTCGATGCGGTGACCACGCTTTCGGAAGAGACGCCGGACGCCGCACGCGTGATCCCGAAAGCCATCTTCCTGACGGCGGTCTACGGTGGCGTTATCTTTATCGCGGCGTCGTTCTTTATGCAGCTGTTCTTTCCCGATATCAGCCGCTTTAAAGATCCGGATGCCGCACTGCCTGAAATTGCGCTGTACGTCGGCGGCAAGCTCTTCCAGTCGATTTTCCTCTGCACCACGTTTGTGAACACGTTAGCCTCTGGCCTGGCTTCACATGCCAGCGTGTCGCGTCTGCTGTATGTGATGGGGCGTGACAATGTGTTTCCGGAGCGCGTGTTTGGCTATGTGCACCCAAAATGGCGGACTCCGGCACTCAACGTCATTATGGTCGGGATTGTCGCGTTGTCGGCGCTGTTCTTCGATTTAGTTACCGCCACAGCGTTAATTAACTTCGGTGCTCTGGTGGCGTTTACCTTCGTGAATCTGTCGGTGTTTAATCATTTCTGGCGGCGTAAAGGAATGAATAAAAGCTGGAAGGATCACTTCCACTATTTGCTGATGCCGCTGGTTGGCGCGCTGACGGTGGGTGTGCTGTGGGTTAACCTCGAGTCAACGTCACTGACACTCGGTCTGGTATGGGCTTCGTTAGGCGGCGCATATTTATGGTATCTGATCCGCCGCTATCGCAAAGTGCCGTTGTATGATGGTGACAGAACGCCGGTGAGTGAAACGTAA", + "dna_sequence_length": 1386, + "functions": [ + "putrescine importer" + ], + "id": "CDS_1281", + "location": [ + [ + "NC_000913", + 1359187, + "-", + 1386 + ] + ], + "md5": "f42f2565320896c5c526cdc79775c52b", + "parent_gene": "", + "protein_md5": "b04842eab7943bed53406effe5908606", + "protein_translation": "MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPLYDGDRTPVSET", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004365" + ], + [ + "gene_synonym", + "ECK1292" + ], + [ + "gene_synonym", + "EcoGene:EG13908" + ], + [ + "gene_synonym", + "GI:90111244" + ], + [ + "gene_synonym", + "GeneID:946202" + ], + [ + "gene_synonym", + "JW5201" + ], + [ + "gene_synonym", + "NP_415813.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78061" + ], + [ + "gene_synonym", + "b1297" + ], + [ + "gene_synonym", + "puuA" + ], + [ + "gene_synonym", + "ycjK" + ] + ], + "dna_sequence": "ATGGAAACCAATATCGTTGAAGTAGAGAACTTTGTTCAGCAGTCAGAAGAGAGGCGGGGTAGCGCCTTTACGCAGGAAGTGAAACGCTACCTGGAGCGCTACCCGAATACGCAATATGTTGATGTTTTACTTACCGATTTAAATGGTTGCTTCCGTGGAAAGCGTATTCCTGTTTCAAGCCTGAAGAAGCTCGAGAAAGGGTGTTATTTCCCGGCCTCGGTATTTGCAATGGATATTCTGGGCAACGTAGTAGAAGAAGCAGGTCTGGGTCAGGAAATGGGCGAGCCGGATCGTACCTGTGTTCCTGTTCTCGGTTCCTTAACTCCTTCTGCCGCCGATCCAGAGTTTATCGGTCAGATGCTCCTGACCATGGTCGATGAAGATGGCGCTCCCTTTGACGTTGAGCCGCGGAACGTTCTTAACCGCCTGTGGCAGCAGCTGCGCCAGCGCGGATTGTTCCCGGTCGTAGCGGTAGAGCTGGAGTTCTATTTACTGGATCGCCAGCGCGACGCTGAAGGGTATCTGCAACCGCCCTGCGCGCCTGGCACCGATGACCGCAATACACAAAGCCAGGTTTACTCCGTTGATAACCTCAACCACTTCGCCGACGTGCTCAATGATATTGATGAACTGGCGCAGTTACAGCTGATTCCGGCAGATGGCGCGGTCGCTGAGGCCTCGCCGGGTCAGTTTGAAATCAACCTTTACCATACTGATAACGTGCTGGAAGCCTGCGATGATGCGCTGGCACTAAAACGCCTGGTGCGTCTGATGGCAGAAAAGCATAAGATGCACGCCACTTTTATGGCGAAGCCGTATGAAGAGCACGCGGGCAGCGGAATGCATATCCATATCAGTATGCAAAATAATCGTGGCGAGAACGTGCTTTCTGACGCGGAAGGCGAAGATTCGCCGCTGCTGAAAAAGATGCTCGCCGGGATGATTGACCTGATGCCGTCGTCGATGGCGTTGCTGGCACCAAACGTGAACTCGTATCGCCGCTTCCAGCCGGGAATGTATGTGCCGACGCAGGCGTCGTGGGGCCATAACAACCGCACCGTCGCCCTGCGTATTCCGTGCGGCGACCGTCATAATCACCGCGTGGAATATCGCGTGGCGGGTGCCGATGCCAACCCATATCTGGTGATGGCAGCGATTTTTGCCGGTATTTTGCATGGCCTTGATAACGAGCTGCCGTTGCAGGAAGAAGTCGAAGGCAACGGGCTGGAACAGGAAGGCTTACCCTTTCCGATTCGCCAGAGCGATGCCCTGGGTGAGTTTATCGAGAATGATCACCTGCGCCGCTATTTAGGCGAACGCTTCTGCCATGTCTATCACGCCTGTAAAAATGATGAGCTGTTGCAGTTTGAGCGCCTCATCACAGAAACAGAAATTGAGTGGATGTTGAAAAACGCGTAA", + "dna_sequence_length": 1419, + "functions": [ + "glutamate--putrescine ligase" + ], + "id": "CDS_1282", + "location": [ + [ + "NC_000913", + 1360908, + "-", + 1419 + ] + ], + "md5": "2e28618bee4bb4db097b94c84b8d6e3c", + "parent_gene": "", + "protein_md5": "2260ff998867594ff6b17496c0063a0c", + "protein_translation": "METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDAEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004369" + ], + [ + "gene_synonym", + "ECK1293" + ], + [ + "gene_synonym", + "EcoGene:EG13909" + ], + [ + "gene_synonym", + "GI:90111245" + ], + [ + "gene_synonym", + "GeneID:945882" + ], + [ + "gene_synonym", + "JW1291" + ], + [ + "gene_synonym", + "NP_415814.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76038" + ], + [ + "gene_synonym", + "b1298" + ], + [ + "gene_synonym", + "puuD" + ], + [ + "gene_synonym", + "ycjL" + ] + ], + "dna_sequence": "ATGGAAAATATAATGAACAATCCGGTTATCGGTGTCGTAATGTGCAGGAACAGGCTTAAGGGTCATGCGACCCAGACTCTGCAAGAAAAGTACCTGAATGCCATCATCCATGCAGGCGGCTTGCCTATTGCGCTACCACATGCGCTGGCGGAACCGTCATTACTTGAACAACTTTTGCCGAAACTCGATGGCATTTATCTTCCTGGTAGTCCCAGCAATGTGCAGCCGCACCTATATGGTGAAAACGGCGATGAGCCTGACGCCGATCCCGGGCGTGATCTTCTGAGCATGGCGATAATTAATGCCGCACTCGAAAGGCGCATCCCCATTTTCGCCATCTGCCGGGGTTTACAAGAACTGGTGGTGGCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGACAAGGGGCGAAGGTCGTTAGCCCACGGTTGCGTGTTGAAGCTCGCTCGCCGGATGGCTTAGTTGAGGCGGTTAGCGTCATCAATCATCCTTTTGCGCTGGGCGTACAGTGGCACCCGGAATGGAACAGTAGCGAGTACGCGCTTTCGCGTATATTGTTCGAGGGCTTTATCACCGCTTGTCAGCACCATATCGCTGAAAAACAGCGACTCTGA", + "dna_sequence_length": 765, + "functions": [ + "gamma-glutamyl-gamma-aminobutyrate hydrolase" + ], + "id": "CDS_1283", + "location": [ + [ + "NC_000913", + 1361120, + "+", + 765 + ] + ], + "md5": "9860181773421941e7a626cb840d3b5f", + "parent_gene": "", + "protein_md5": "5f832b8e4ebdda24789362e2b7af8314", + "protein_translation": "MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004371" + ], + [ + "gene_synonym", + "ECK1294" + ], + [ + "gene_synonym", + "EcoGene:EG12431" + ], + [ + "gene_synonym", + "GI:16129260" + ], + [ + "gene_synonym", + "GeneID:945886" + ], + [ + "gene_synonym", + "JW1292" + ], + [ + "gene_synonym", + "NP_415815.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9U6" + ], + [ + "gene_synonym", + "b1299" + ], + [ + "gene_synonym", + "puuR" + ], + [ + "gene_synonym", + "ycjC" + ] + ], + "dna_sequence": "ATGAGTGATGAGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTTTTCCGAGCCGGAAAAACCTGATGAGCCGCAGGTCGTCATTAATCAGGACGACTTAATTGAGATGGGTAGTCAGGGTGTGTCAATGAAGCTGGTTCATAACGGTAACCCGAATCGCACGCTGGCGATGATCTTTGAAACGTACCAGCCGGGCACAACCACTGGGGAAAGAATTAAGCATCAGGGTGAGGAAATAGGCACTGTACTGGAAGGTGAAATTGTTCTGACGATTAATGGTCAGGATTACCACCTCGTCGCGGGGCAAAGTTATGCCATTAATACCGGCATCCCGCACAGTTTCAGTAATACGTCGGCAGGTATTTGCCGAATTATCAGCGCCCATACGCCCACCACGTTTTAA", + "dna_sequence_length": 558, + "functions": [ + "repressor for the divergent puu operons, putrescine inducible" + ], + "id": "CDS_1284", + "location": [ + [ + "NC_000913", + 1361911, + "+", + 558 + ] + ], + "md5": "ce143c9add3cd5f7f18b2c8a6f550672", + "parent_gene": "", + "protein_md5": "80f9398ec78d7f51d888303374d3524f", + "protein_translation": "MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004376" + ], + [ + "gene_synonym", + "ECK1295" + ], + [ + "gene_synonym", + "EcoGene:EG10036" + ], + [ + "gene_synonym", + "GI:16129261" + ], + [ + "gene_synonym", + "GeneID:947003" + ], + [ + "gene_synonym", + "JW1293" + ], + [ + "gene_synonym", + "NP_415816.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23883" + ], + [ + "gene_synonym", + "aldH" + ], + [ + "gene_synonym", + "b1300" + ], + [ + "gene_synonym", + "puuC" + ] + ], + "dna_sequence": "ATGAATTTTCATCATCTGGCTTACTGGCAGGATAAAGCGTTAAGTCTCGCCATTGAAAACCGCTTATTTATTAACGGTGAATATACTGCTGCGGCGGAAAATGAAACCTTTGAAACCGTTGATCCGGTCACCCAGGCACCGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCACTGCTGGAAACTCTCGACACCGGCAAACCGATTCGTCACAGTCTGCGTGATGATATTCCCGGCGCGGCGCGCGCCATTCGCTGGTACGCCGAAGCGATCGACAAAGTGTATGGCGAAGTGGCGACCACCAGTAGCCATGAGCTGGCGATGATCGTGCGTGAACCGGTCGGCGTGATTGCCGCCATCGTGCCGTGGAACTTCCCGCTGTTGCTGACTTGCTGGAAACTCGGCCCGGCGCTGGCGGCGGGAAACAGCGTGATTCTAAAACCGTCTGAAAAATCACCGCTCAGTGCGATTCGTCTCGCGGGGCTGGCGAAAGAAGCAGGCTTGCCGGATGGTGTGTTGAACGTGGTGACGGGTTTTGGTCATGAAGCCGGGCAGGCGCTGTCGCGTCATAACGATATCGACGCCATTGCCTTTACCGGTTCAACCCGTACCGGGAAACAGCTGCTGAAAGATGCGGGCGACAGCAACATGAAACGCGTCTGGCTGGAAGCGGGCGGCAAAAGCGCCAACATCGTTTTCGCTGACTGCCCGGATTTGCAACAGGCGGCAAGCGCCACCGCAGCAGGCATTTTCTACAACCAGGGACAGGTGTGCATCGCCGGAACGCGCCTGTTGCTGGAAGAGAGCATCGCCGATGAATTCTTAGCCCTGTTAAAACAGCAGGCGCAAAACTGGCAGCCGGGCCATCCACTTGATCCCGCAACCACCATGGGCACCTTAATCGACTGCGCCCACGCCGACTCGGTCCATAGCTTTATTCGGGAAGGCGAAAGCAAAGGGCAACTGTTGTTGGATGGCCGTAACGCCGGGCTGGCTGCCGCCATCGGCCCGACCATCTTTGTGGATGTGGACCCGAATGCGTCCTTAAGTCGCGAAGAGATTTTCGGTCCGGTGCTGGTGGTCACGCGTTTCACATCAGAAGAACAGGCGCTACAGCTTGCCAACGACAGCCAGTACGGCCTTGGCGCGGCGGTATGGACGCGCGACCTCTCCCGCGCGCACCGCATGAGCCGACGCCTGAAAGCCGGTTCCGTCTTCGTCAATAACTACAACGACGGCGATATGACCGTGCCGTTTGGCGGCTATAAGCAGAGCGGCAACGGTCGCGACAAATCCCTGCATGCCCTTGAAAAATTCACTGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGA", + "dna_sequence_length": 1488, + "functions": [ + "gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase", + "succinate semialdehyde dehydrogenase" + ], + "id": "CDS_1285", + "location": [ + [ + "NC_000913", + 1362743, + "+", + 1488 + ] + ], + "md5": "de429ce8130d21d27c630c0ec93836a7", + "parent_gene": "", + "protein_md5": "f656e84af4843b2f7e5f55ee592a7e5b", + "protein_translation": "MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004378" + ], + [ + "gene_synonym", + "ECK1296" + ], + [ + "gene_synonym", + "EcoGene:EG11822" + ], + [ + "gene_synonym", + "GI:16129262" + ], + [ + "gene_synonym", + "GeneID:945072" + ], + [ + "gene_synonym", + "JW1294" + ], + [ + "gene_synonym", + "NP_415817.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37906" + ], + [ + "gene_synonym", + "b1301" + ], + [ + "gene_synonym", + "ordL" + ], + [ + "gene_synonym", + "puuB" + ], + [ + "gene_synonym", + "ycjA" + ] + ], + "dna_sequence": "ATGACCGAACATACCAGCAGTTACTACGCCGCCAGTGCGAATAAATATGCACCATTCGACACGCTGAATGAGTCAATCACCTGCGACGTTTGCGTGGTTGGCGGCGGCTATACCGGGCTCTCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAATGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGGCAGCATGATGTTCGAAGGTGGTGAGATCATCCGCGAACGTATCAAACGTTATCAGATTGACTGCGACTACCGCCCCGGCGGCCTGTTTGTGGCGATGAATGATAAACAGCTCGCCACACTTGAAGAGCAGAAAGAGAACTGGGAACGCTACGGCAATAAACAGCTGGAATTGCTGGACGCCAACGCCATTCGCCGTGAAGTAGCCAGCGATCGCTATACCGGTGCGCTGCTGGATCACAGCGGTGGGCATATTCATCCGCTAAACCTTGCCATTGGCGAAGCGGACGCCATCCGCCTCAACGGCGGGCGCGTGTATGAACTTTCTGCCGTGACGCAGATCCAGCACACCACGCCAGCCGTTGTGCGAACTGCCAAAGGTCAGGTGACGGCGAAGTATGTGATTGTCGCCGGGAATGCGTATCTGGGCGATAAAGTAGAGCCGGAACTGGCGAAACGCAGCATGCCGTGCGGCACGCAGGTGATCACCACCGAACGGCTGTCGGAAGATTTAGCCCGTTCGCTGATCCCGAAAAACTACTGTGTGGAAGACTGTAACTATCTGCTTGATTACTACCGTCTTACCGCCGACAACCGCCTGCTGTACGGCGGCGGCGTGGTCTACGGCGCGCGCGACCCGGATGACGTTGAGCGCCTTGTGGTGCCGAAACTGCTGAAAACCTTCCCGCAGCTGAAGGGCGTGAAAATTGATTACCGCTGGACGGGCAACTTCCTGCTGACCCTGTCGCGTATGCCGCAGTTTGGTCGCCTCGATACCAACATCTATTACATGCAGGGCTACAGCGGCCACGGCGTGACCTGTACTCATCTAGCCGGACGTTTGATTGCCGAACTGCTGCGCGGCGACGCCGAACGTTTCGATGCCTTCGCCAATCTGCCGCATTACCCGTTCCCCGGCGGGCGCACGCTGCGTGTGCCGTTTACCGCGATGGGCGCGGCGTATTACAGCCTGCGCGATCGTCTGGGCGTTTAA", + "dna_sequence_length": 1281, + "functions": [ + "gamma-glutamylputrescine oxidoreductase" + ], + "id": "CDS_1286", + "location": [ + [ + "NC_000913", + 1364232, + "+", + 1281 + ] + ], + "md5": "389f7143e3673785d8e901ff549e7c32", + "parent_gene": "", + "protein_md5": "4f2b74b12129cb227031eb5b97afe5b4", + "protein_translation": "MTEHTSSYYAASANKYAPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFEGGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004380" + ], + [ + "gene_synonym", + "ECK1297" + ], + [ + "gene_synonym", + "EcoGene:EG13187" + ], + [ + "gene_synonym", + "GI:16129263" + ], + [ + "gene_synonym", + "GeneID:945446" + ], + [ + "gene_synonym", + "JW1295" + ], + [ + "gene_synonym", + "NP_415818.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P50457" + ], + [ + "gene_synonym", + "b1302" + ], + [ + "gene_synonym", + "goaG" + ], + [ + "gene_synonym", + "puuE" + ] + ], + "dna_sequence": "ATGAGCAACAATGAATTCCATCAGCGTCGTCTTTCTGCCACTCCGCGCGGGGTTGGCGTGATGTGTAACTTCTTCGCCCAGTCGGCTGAAAACGCCACGCTGAAGGATGTTGAGGGCAACGAGTACATCGATTTCGCCGCAGGCATTGCGGTGCTGAATACCGGACATCGCCACCCTGATCTGGTCGCGGCGGTGGAGCAGCAACTGCAACAGTTTACCCACACCGCGTATCAGATTGTGCCGTATGAAAGCTACGTCACCCTGGCGGAGAAAATCAACGCCCTTGCCCCGGTGAGCGGGCAGGCCAAAACCGCGTTCTTCACCACCGGTGCGGAAGCGGTGGAAAACGCGGTGAAAATTGCTCGCGCCCATACCGGACGCCCTGGCGTGATTGCGTTTAGCGGCGGCTTTCACGGTCGTACGTATATGACCATGGCGCTGACCGGAAAAGTTGCGCCGTACAAAATCGGCTTCGGCCCGTTCCCTGGTTCGGTGTATCACGTACCTTATCCGTCAGATTTACACGGCATTTCAACACAGGACTCCCTCGACGCCATCGAACGCTTGTTTAAATCAGACATCGAAGCGAAGCAGGTGGCGGCGATTATTTTCGAACCGGTGCAGGGCGAGGGCGGTTTCAACGTTGCGCCAAAAGAGCTGGTTGCCGCTATTCGCCGCCTGTGCGACGAGCACGGTATTGTGATGATTGCTGATGAAGTGCAAAGCGGCTTTGCGCGTACCGGTAAGCTGTTTGCCATGGATCATTACGCCGATAAGCCGGATTTAATGACGATGGCGAAAAGCCTCGCGGGCGGGATGCCGCTTTCGGGCGTGGTCGGTAACGCGAATATTATGGACGCACCCGCGCCGGGCGGGCTTGGCGGCACCTACGCCGGTAACCCGCTGGCGGTGGCTGCCGCGCACGCGGTGCTCAACATTATCGACAAAGAATCACTCTGCGAACGCGCGAATCAACTGGGCCAGCGTCTCAAAAACACGTTGATTGATGCCAAAGAAAGCGTTCCGGCCATTGCTGCGGTACGCGGCCTGGGGTCGATGATTGCGGTAGAGTTTAACGATCCGCAAACGGGCGAGCCGTCAGCGGCGATTGCACAGAAAATCCAGCAACGCGCGCTGGCGCAGGGGCTGCTCCTGCTGACCTGTGGCGCATACGGCAACGTGATTCGCTTCCTGTATCCGCTGACCATCCCGGATGCGCAATTCGATGCGGCAATGAAAATTTTGCAGGATGCGCTGAGCGATTAA", + "dna_sequence_length": 1266, + "functions": [ + "4-aminobutyrate aminotransferase, PLP-dependent" + ], + "id": "CDS_1287", + "location": [ + [ + "NC_000913", + 1365550, + "+", + 1266 + ] + ], + "md5": "231e75743cf2707e3ea6479bb8105078", + "parent_gene": "", + "protein_md5": "e5db5e4d81efa1127717b7285c13d6b5", + "protein_translation": "MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004383" + ], + [ + "gene_synonym", + "ECK1298" + ], + [ + "gene_synonym", + "EcoGene:EG12344" + ], + [ + "gene_synonym", + "GI:90111246" + ], + [ + "gene_synonym", + "GeneID:945683" + ], + [ + "gene_synonym", + "JW1296" + ], + [ + "gene_synonym", + "NP_415819.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37344" + ], + [ + "gene_synonym", + "b1303" + ], + [ + "gene_synonym", + "pspF" + ], + [ + "gene_synonym", + "ycjB" + ] + ], + "dna_sequence": "ATGGCAGAATACAAAGATAATTTACTTGGTGAGGCGAACAGCTTTCTCGAAGTGCTGGAACAGGTTTCGCATCTCGCACCGCTGGACAAACCGGTGCTCATCATCGGCGAACGCGGCACCGGTAAAGAGCTGATTGCCAGCCGCCTGCATTATCTCTCCTCCCGTTGGCAAGGGCCGTTTATTTCCCTTAACTGCGCGGCGTTAAATGAAAATCTGCTGGATTCCGAACTGTTTGGTCACGAAGCGGGGGCGTTTACCGGTGCGCAAAAACGTCATCCAGGGAGATTTGAACGTGCCGACGGCGGTACGCTATTTCTTGATGAACTCGCTACGGCACCGATGATGGTGCAGGAGAAATTATTGCGCGTGATTGAGTACGGTGAACTGGAGCGCGTTGGCGGCAGCCAACCATTGCAGGTGAATGTGCGGTTGGTATGCGCGACGAATGCCGATCTCCCGGCGATGGTCAATGAAGGCACTTTTCGCGCTGACCTGCTCGACCGACTGGCTTTTGATGTTGTACAACTGCCACCACTGCGCGAGCGCGAAAGCGACATAATGTTGATGGCAGAATACTTTGCCATCCAGATGTGTCGGGAAATCAAGCTGCCTCTGTTCCCGGGGTTTACGGAGCGCGCCAGAGAAACATTGCTGAATTATCGTTGGCCGGGAAATATTCGTGAATTGAAAAACGTGGTGGAACGTTCAGTGTATCGCCACGGCACCAGCGATTATCCGCTTGATGACATCATTATTGATCCCTTTAAACGGCGTCCGCCTGAAGACGCTATCGCCGTTTCAGAAACCACCTCGCTTCCAACACTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCAGGAAAAAGAGTTGCTGCAACTCAGTTTGCAACAAGGGAAATATAACCAGAAGCGCGCGGCTGAATTACTGGGGTTAACTTATCATCAGTTCCGCGCGTTGTTGAAAAAGCACCAGATTTAG", + "dna_sequence_length": 978, + "functions": [ + "psp operon transcriptional activator" + ], + "id": "CDS_1288", + "location": [ + [ + "NC_000913", + 1367912, + "-", + 978 + ] + ], + "md5": "1e283caae146ce1dc9035c40ea8b64cf", + "parent_gene": "", + "protein_md5": "1b9e56cbcef41086039e5b0acfff5edc", + "protein_translation": "MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004387" + ], + [ + "gene_synonym", + "ECK1299" + ], + [ + "gene_synonym", + "EcoGene:EG10776" + ], + [ + "gene_synonym", + "GI:16129265" + ], + [ + "gene_synonym", + "GeneID:945887" + ], + [ + "gene_synonym", + "JW1297" + ], + [ + "gene_synonym", + "NP_415820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFM6" + ], + [ + "gene_synonym", + "b1304" + ], + [ + "gene_synonym", + "cog" + ], + [ + "gene_synonym", + "pspA" + ] + ], + "dna_sequence": "ATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGCCGAACTGGCGCTGCTGAAAGAGAGAGAGGATCTGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGATTAAGTCCCTGGAACATGAAGTGACGCTGGTGGACGATACGCTGGCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCGCCAGCAGGCATTGATGTTACGTCATCAGGCGGCAAACTCGTCGCGCGATGTGCGTCGTCAGCTGGACAGTGGCAAACTGGATGAAGCAATGGCTCGTTTCGAATCTTTCGAACGTCGTATTGACCAGATGGAAGCGGAAGCAGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGATGATGCAATCAGCGAACAACTGGCACAATTAAAAGCCAAAATGAAGCAAGACAATCAATAA", + "dna_sequence_length": 669, + "functions": [ + "regulatory protein for phage-shock-protein operon" + ], + "id": "CDS_1289", + "location": [ + [ + "NC_000913", + 1368079, + "+", + 669 + ] + ], + "md5": "1375c99e92c58daf0a249d51dee8284e", + "parent_gene": "", + "protein_md5": "e704c2142dab9b1befcb173e95fc3a36", + "protein_translation": "MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMKQDNQ", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004389" + ], + [ + "gene_synonym", + "ECK1300" + ], + [ + "gene_synonym", + "EcoGene:EG10777" + ], + [ + "gene_synonym", + "GI:16129266" + ], + [ + "gene_synonym", + "GeneID:945893" + ], + [ + "gene_synonym", + "JW1298" + ], + [ + "gene_synonym", + "NP_415821.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFM9" + ], + [ + "gene_synonym", + "b1305" + ], + [ + "gene_synonym", + "pspB" + ] + ], + "dna_sequence": "ATGAGCGCGCTATTTCTGGCTATTCCGTTAACCATTTTTGTGCTGTTTGTTTTACCGATCTGGTTATGGCTGCATTACAGCAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGCTGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAA", + "dna_sequence_length": 225, + "functions": [ + "psp operon transcription co-activator" + ], + "id": "CDS_1290", + "location": [ + [ + "NC_000913", + 1368801, + "+", + 225 + ] + ], + "md5": "a19155081682de9a752396d99234a82c", + "parent_gene": "", + "protein_md5": "e9921b39277c0b42ae747f7a86edb6b4", + "protein_translation": "MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLADEAKRMRERIQALESILDAEHPNWRDR", + "protein_translation_length": 74, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004391" + ], + [ + "gene_synonym", + "ECK1301" + ], + [ + "gene_synonym", + "EcoGene:EG10778" + ], + [ + "gene_synonym", + "GI:16129267" + ], + [ + "gene_synonym", + "GeneID:945499" + ], + [ + "gene_synonym", + "JW1299" + ], + [ + "gene_synonym", + "NP_415822.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFN2" + ], + [ + "gene_synonym", + "b1306" + ], + [ + "gene_synonym", + "pspC" + ] + ], + "dna_sequence": "ATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGCATGGTCCGCGGCGTCTGCGCCGGGATTGCCAACTATTTTGATGTACCGGTAAAACTGGTGCGTATCCTGGTGGTGCTGTCGATTTTCTTCGGTCTGGCGCTGTTTACCCTGGTTGCTTACATCATTTTGTCATTTGCGCTTGATCCAATGCCGGACAACATGGCCTTTGGTGAGCAGCTACCTTCCAGCAGCGAATTGCTGGATGAAGTCGACCGTGAACTGGCGGCAAGTGAAACGCGTTTACGCGAGATGGAACGTTATGTCACTTCCGATACTTTCACGTTACGTAGCCGTTTCCGTCAACTGTGA", + "dna_sequence_length": 360, + "functions": [ + "psp operon transcription co-activator" + ], + "id": "CDS_1291", + "location": [ + [ + "NC_000913", + 1369025, + "+", + 360 + ] + ], + "md5": "f55f0157010ce203cf685afdff7252cd", + "parent_gene": "", + "protein_md5": "f54267821097bf2da5d53969cd3631b0", + "protein_translation": "MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004394" + ], + [ + "gene_synonym", + "ECK1302" + ], + [ + "gene_synonym", + "EcoGene:EG10779" + ], + [ + "gene_synonym", + "GI:16129268" + ], + [ + "gene_synonym", + "GeneID:945635" + ], + [ + "gene_synonym", + "JW1300" + ], + [ + "gene_synonym", + "NP_415823.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFV8" + ], + [ + "gene_synonym", + "b1307" + ], + [ + "gene_synonym", + "pspD" + ] + ], + "dna_sequence": "ATGAATACTCGCTGGCAACAGGCCGGGCAAAAGGTAAAGCCTGGTTTCAAATTAGCAGGCAAGCTGGTACTTCTTACCGCACTGCGCTATGGCCCGGCGGGTGTGGCGGGCTGGGCGATAAAATCAGTTGCTCGCCGACCGCTGAAAATGTTGCTGGCTGTGGCGCTGGAACCGCTGTTAAGTCGGGCTGCTAATAAACTGGCACAGCGTTATAAAAGGTGA", + "dna_sequence_length": 222, + "functions": [ + "peripheral inner membrane phage-shock protein" + ], + "id": "CDS_1292", + "location": [ + [ + "NC_000913", + 1369393, + "+", + 222 + ] + ], + "md5": "b04b51e4bad1c48e50f4797765433b26", + "parent_gene": "", + "protein_md5": "9b875f158a8efa9d47cded8a23df00bd", + "protein_translation": "MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLLSRAANKLAQRYKR", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004397" + ], + [ + "gene_synonym", + "ECK1303" + ], + [ + "gene_synonym", + "EcoGene:EG10780" + ], + [ + "gene_synonym", + "GI:16129269" + ], + [ + "gene_synonym", + "GeneID:945652" + ], + [ + "gene_synonym", + "JW1301" + ], + [ + "gene_synonym", + "NP_415824.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23857" + ], + [ + "gene_synonym", + "b1308" + ], + [ + "gene_synonym", + "pspE" + ] + ], + "dna_sequence": "ATGTTTAAAAAAGGCTTACTTGCTCTGGCACTGGTGTTTTCACTGCCCGTTTTCGCCGCTGAACACTGGATCGATGTTCGTGTTCCAGAGCAGTATCAGCAAGAGCACGTTCAGGGGGCCATCAATATTCCCCTGAAGGAAGTGAAAGAGCGCATTGCCACCGCCGTTCCGGATAAAAACGACACCGTGAAAGTGTATTGCAATGCCGGACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAA", + "dna_sequence_length": 315, + "functions": [ + "thiosulfate:cyanide sulfurtransferase (rhodanese)" + ], + "id": "CDS_1293", + "location": [ + [ + "NC_000913", + 1369689, + "+", + 315 + ] + ], + "md5": "03364d1eb1d84b75f5483abaabb30440", + "parent_gene": "", + "protein_md5": "18dca3e93ec28bfdee59bd227ada733e", + "protein_translation": "MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004400" + ], + [ + "gene_synonym", + "ECK1304" + ], + [ + "gene_synonym", + "EcoGene:EG13910" + ], + [ + "gene_synonym", + "GI:90111247" + ], + [ + "gene_synonym", + "GeneID:945659" + ], + [ + "gene_synonym", + "JW1302" + ], + [ + "gene_synonym", + "NP_415825.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76041" + ], + [ + "gene_synonym", + "b1309" + ], + [ + "gene_synonym", + "ycjM" + ] + ], + "dna_sequence": "ATGAAACAGAAAATTACGGATTACCTGGACGAAATCTACGGTGGAACATTTACCGCAACTCATTTACAGAAACTTGTAACGCGTCTTGAGAGTGCGAAACGATTAATTACACAGCGACGTAAAAAACACTGGGATGAAAGTGATGTCGTGTTAATTACCTATGCCGATCAATTTCACAGCAATGATTTAAAACCATTACCCACATTTAATCAGTTTTACCATCAATGGCTGCAAAGCATTTTTTCACATGTTCATTTGTTGCCGTTTTATCCATGGTCATCTGATGATGGCTTTTCGGTAATTGATTATCATCAGGTCGCCAGTGAAGCGGGGGAGTGGCAGGATATTCAGCAACTCGGTGAATGCAGTCATTTAATGTTTGATTTTGTCTGCAACCATATGTCGGCAAAAAGTGAATGGTTTAAAAACTATTTACAACAGCATCCAGGTTTTGAAGATTTTTTTATTGCCGTTGACCCGCAAACCGATCTCAGCGCCGTCACTCGCCCGCGTGCGTTACCGTTATTAACGCCATTCCAGATGCGCGATCATTCAACGCGCCATTTATGGACCACCTTTAGTGACGATCAAATTGACCTGAATTACCGTAGCCCTGAAGTGTTGCTGGCGATGGTGGATGTTTTACTCTGTTACCTTGCGAAAGGTGCTGAGTATGTCCGCCTGGATGCCGTTGGCTTTATGTGGAAAGAGCCGGGAACAAGCTGCATCCATCTGGAAAAAACACATCTGATTATCAAACTGTTACGGTCGATTATTGATAACGTTGCGCCAGGTACAGTGATCATTACCGAGACCAATGTTCCGCATAAAGACAACATTGCTTACTTTGGCGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCTACGGGGCTTGTTGCCTGAAAGCGAAATATTAGAGCTGGTCGAGGCGTTACAGCAGGAAGGTGCATTAGTAAACTGGAAAAATAATCCCGACGGTACACGCAGTCCGTATGAAATAAATGTGACCTATATGGATGCGTTAAGCCGCCGTGAGAGTAGCGATGAAGAACGTTGCGCCAGGTTTATCCTTGCCCATGCGATTTTGTTAAGTTTCCCCGGTGTGCCAGCGATATATATTCAAAGTATTCTTGGCTCGCGTAATGATTACGCAGGTGTCGAAAAACTCGGATATAACCGTGCGATTAACCGTAAAAAATATCACAGTAAAGAGATAACCCGAGAACTGAACGATGAAGCTACATTAAGGCATGCGGTATATCATGAGTTGTCGCGTTTAATTACACTTCGTCGCAGCCATAACGAGTTTCATCCGGATAATAATTTTACCATTGATACGATTAATTCATCCGTAATGCGTATTCCAAGAAGTAACGCTGATGGTAATTGTCTGACTGGATTGTTTAATGTCAGTAAAAATATTCAGCATGTAAATATTACTAATCTGCATGGTCGGGATCTGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAA", + "dna_sequence_length": 1680, + "functions": [ + "alpha amylase catalytic domain family protein" + ], + "id": "CDS_1294", + "location": [ + [ + "NC_000913", + 1370216, + "+", + 1680 + ] + ], + "md5": "8e7038e47048dea52f469c832f8cb00e", + "parent_gene": "", + "protein_md5": "b48c5a582763fa1ba763524c9601cc91", + "protein_translation": "MKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIPRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIK", + "protein_translation_length": 559, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004402" + ], + [ + "gene_synonym", + "ECK1305" + ], + [ + "gene_synonym", + "EcoGene:EG13911" + ], + [ + "gene_synonym", + "GI:16129271" + ], + [ + "gene_synonym", + "GeneID:945696" + ], + [ + "gene_synonym", + "JW1303" + ], + [ + "gene_synonym", + "NP_415826.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76042" + ], + [ + "gene_synonym", + "b1310" + ], + [ + "gene_synonym", + "ycjN" + ] + ], + "dna_sequence": "ATGATTAAATCAAAAATCGTGCTGTTATCAGCACTGGTTTCATGCGCCCTGATTTCAGGCTGTAAAGAAGAAAATAAAACGAATGTATCCATCGAATTTATGCATTCTTCGGTGGAGCAGGAGCGCCAGGCCGTTATCAGTAAATTGATTGCCCGTTTTGAAAAAGAAAACCCTGGCATCACCGTTAAGCAAGTGCCCGTGGAAGAAGATGCCTATAACACTAAAGTCATTACTCTTTCACGTAGCGGTTCGCTGCCGGAAGTGATCGAAACCAGCCATGACTACGCCAAAGTGATGGACAAAGAGCAGCTTATCGATCGCAAAGCGGTTGCCACAGTCATCAGCAACGTTGGTGAAGGCGCGTTTTACGATGGCGTACTGCGTATTGTGCGTACCGAAGATGGTAGCGCATGGACCGGTGTTCCTGTCAGCGCCTGGATTGGCGGTATCTGGTATCGCAAAGATGTGCTGGCAAAAGCGGGGCTTGAGGAGCCGAAAAACTGGCAACAGCTGCTGGACGTTGCACAGAAACTGAATGACCCGGCGAATAAAAAATACGGCATTGCGCTGCCTACAGCAGAAAGCGTGTTGACGGAACAATCCTTCTCCCAGTTTGCGTTATCCAACCAGGCTAACGTCTTTAACGCCGAAGGCAAAATCACCCTTGATACACCAGAGATGATGCAGGCACTGACCTATTACCGCGACCTTACTGCCAACACTATGCCGGGTTCTAACGACATCATGGAAGTGAAAGACGCCTTTATGAACGGCACCGCGCCGATGGCGATTTACTCCACCTATATCCTTCCGGCTGTGATTAAAGAAGGCGACCCGAAAAACGTCGGTTTCGTGGTGCCAACCGAGAAAAACTCTGCGGTCTACGGCATGTTGACCTCGCTGACCATTACCGCCGGGCAAAAGACCGAAGAGACGGAAGCAGCAGAAAAATTTGTCACCTTTATGGAGCAGGCAGACAACATTGCCGACTGGGTGATGATGTCGCCAGGTGCTGCGCTGCCGGTGAATAAAGCGGTGGTGACTACCGCCACCTGGAAAGACAACGACGTTATTAAGGCGCTGGGTGAACTACCGAATCAGCTAATCGGTGAACTGCCAAATATTCAGGTTTTTGGCGCAGTAGGGGATAAAAACTTTACCCGCATGGGTGATGTGACGGGTTCTGGCGTGGTGAGTTCAATGGTGCATAACGTCACCGTGGGTAAAGCCGATCTCTCTACTACGCTGCAAGCGAGCCAGAAAAAACTGGATGAACTGATCGAACAGCACTAA", + "dna_sequence_length": 1293, + "functions": [ + "putative ABC sugar transporter periplasmic binding protein" + ], + "id": "CDS_1295", + "location": [ + [ + "NC_000913", + 1371909, + "+", + 1293 + ] + ], + "md5": "9821173302c8b5f8261d53845ec4d58f", + "parent_gene": "", + "protein_md5": "aa4dd4ee8be63d6f00347aabeeef97a3", + "protein_translation": "MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004405" + ], + [ + "gene_synonym", + "ECK1306" + ], + [ + "gene_synonym", + "EcoGene:EG13912" + ], + [ + "gene_synonym", + "GI:16129272" + ], + [ + "gene_synonym", + "GeneID:945888" + ], + [ + "gene_synonym", + "JW1304" + ], + [ + "gene_synonym", + "NP_415827.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR7" + ], + [ + "gene_synonym", + "b1311" + ], + [ + "gene_synonym", + "ycjO" + ] + ], + "dna_sequence": "ATGAACAGGCTTTTTTCAGGTCGTTCCGATATGCCCTTTGCGCTGCTGCTTCTCGCGCCCAGCTTATTACTGCTGGGCGGTCTGGTGGCGTGGCCGATGGTGTCGAATATCGAAATCAGTTTTTTACGTCTGCCGCTCAATCCCAACATCGAGTCAACGTTTGTTGGGGTGAGCAACTATGTGCGTATCCTCTCCGATCCCGGCTTCTGGCATTCGCTGTGGATGACGGTCTGGTATACCGCGCTGGTGGTGGCGGGCAGCACCGTGCTCGGGCTGGCGGTGGCGATGTTTTTCAACCGCGAGTTCCGCCTGCGCAAAACCGCGCGTTCGCTGGTGATCCTCTCCTACGTAACGCCGTCCATTTCGCTGGTGTTCGCCTGGAAATACATGTTCAACAACGGCTACGGCATTGTTAACTACCTCGGCGTCGATCTTCTGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTTCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGCCTGGCAACGGTTTCGTATCGTCACGCTGCCCGCAATTATGCCGGTCCTGGCGACGGTGGTGACACTGCGCACCATCTGGATGTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTATTTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAA", + "dna_sequence_length": 882, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_1296", + "location": [ + [ + "NC_000913", + 1373222, + "+", + 882 + ] + ], + "md5": "f44a00a89effec500932c7e3b55ec8a9", + "parent_gene": "", + "protein_md5": "31d267a4e80d9caed27ae117032c4ea9", + "protein_translation": "MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVNLNGNK", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004409" + ], + [ + "gene_synonym", + "ECK1307" + ], + [ + "gene_synonym", + "EcoGene:EG13913" + ], + [ + "gene_synonym", + "GI:16129273" + ], + [ + "gene_synonym", + "GeneID:945892" + ], + [ + "gene_synonym", + "JW1305" + ], + [ + "gene_synonym", + "NP_415828.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77716" + ], + [ + "gene_synonym", + "b1312" + ], + [ + "gene_synonym", + "ycjP" + ] + ], + "dna_sequence": "ATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCACTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACTTCCGTAACAGTCTGGTGGTGTCTGTGGTTTCATCCGTGGTGGCGGTATTCCTCGGCATTCTTGGGGCTTACGCGCTTTCCCGCCTGCGCTTTAAAGGTCGGATGACCATCAACGCCAGCTTTTACACGGTGTATATGTTCTCTGGCATTTTGCTGGTGGTGCCGCTTTTCAAAATCATCACCGCGCTTGGCATTTACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCATCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCGGGCTGATATCCGTGTTCGTCTACTGCTTTATGGTGGCGTGGAACGACTATCTGTTTGCGTCGATTTTCCTCTCCAGCGCCAGCAATTTCACCTTACCGGTGGGCCTGAACGCGCTGTTCAGTACGCCAGATTACATCTGGGGACGGATGATGGCGGCCTCACTGGTGACCGCATTGCCGGTGGTGATTATGTATGCGCTTTCGGAACGTTTTATTAAGAGTGGTTTGACCGCCGGTGGCGTGAAGGGCTAA", + "dna_sequence_length": 843, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_1297", + "location": [ + [ + "NC_000913", + 1374090, + "+", + 843 + ] + ], + "md5": "eeaeff85f9e8c4651654940958d9191e", + "parent_gene": "", + "protein_md5": "da76b740914b329105707b267c004b82", + "protein_translation": "MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004412" + ], + [ + "gene_synonym", + "ECK1308" + ], + [ + "gene_synonym", + "EcoGene:EG13914" + ], + [ + "gene_synonym", + "GI:16129274" + ], + [ + "gene_synonym", + "GeneID:945971" + ], + [ + "gene_synonym", + "JW1306" + ], + [ + "gene_synonym", + "NP_415829.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76043" + ], + [ + "gene_synonym", + "b1313" + ], + [ + "gene_synonym", + "ycjQ" + ] + ], + "dna_sequence": "ATGAAAAAGTTAGTAGCCACAGCACCGCGTGTTGCTGCGCTGGTTGAGTATGAAGATCGGGCGATTTTAGCTAATGAAGTGAAGATCCGCGTGCGTTTCGGCGCACCGAAACACGGAACGGAAGTGGTCGACTTCCGCGCCGCCAGCCCGTTTATTGATGAAGACTTTAACGGCGAATGGCAGATGTTCACTCCGCGTCCGGCAGATGCGCCGCGCGGCATTGAGTTTGGCAAATTCCAGCTTGGCAACATGGTGGTTGGCGACATTATCGAGTGCGGCAGCGACGTTACCGACTACGCGGTGGGCGACAGCGTATGCGGCTACGGCCCGCTCTCCGAGACGGTCATCATTAACGCAGTGAATAACTACAAGCTGCGCAAAATGCCGCAAGGCAGCTCCTGGAAAAACGCCGTCTGCTACGACCCGGCGCAGTTTGCCATGAGCGGCGTGCGCGATGCCAACGTGCGCGTAGGGGATTTTGTGGTGGTGGTAGGGCTTGGCGCAATCGGTCAAATTGCCATCCAACTGGCTAAACGCGCTGGCGCTTCTGTGGTGATTGGCGTCGATCCTATCGCCCATCGCTGTGATATTGCCCGTCGCCACGGCGCGGATTTCTGCCTTAACCCCATCGGCACTGATGTAGGTAAAGAGATCAAAACGCTGACCGGCAAGCAGGGTGCCGATGTGATTATCGAAACCAGCGGCTACGCCGACGCGCTGCAATCGGCGCTCCGCGGTCTGGCTTATGGCGGCACCATCTCCTATGTCGCGTTTGCCAAGCCGTTTGCCGAAGGTTTTAACCTCGGACGCGAAGCGCATTTCAATAACGCCAAAATTGTCTTCTCTCGCGCGTGCAGCGAACCGAACCCGGATTATCCGCGCTGGAGCCGCAAGCGTATTGAAGAAACCTGTTGGGAACTGCTGATGAACGGTTATCTCAATTGCGAAGATTTAATCGACCCGGTGGTGACCTTTGCCAATAGCCCGGAAAGCTATATGCAGTATGTCGACCAGCATCCGGAACAGAGCATCAAAATGGGCGTTACGTTTTAA", + "dna_sequence_length": 1053, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_1298", + "location": [ + [ + "NC_000913", + 1374963, + "+", + 1053 + ] + ], + "md5": "cc5464064f24ec9c29d6840f0347495d", + "parent_gene": "", + "protein_md5": "fc1e8d51ffb06a57cec6c6ce903f5e40", + "protein_translation": "MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEIKTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004414" + ], + [ + "gene_synonym", + "ECK1309" + ], + [ + "gene_synonym", + "EcoGene:EG13915" + ], + [ + "gene_synonym", + "GI:90111248" + ], + [ + "gene_synonym", + "GeneID:947427" + ], + [ + "gene_synonym", + "JW5202" + ], + [ + "gene_synonym", + "NP_415830.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76044" + ], + [ + "gene_synonym", + "b1314" + ], + [ + "gene_synonym", + "ycjR" + ] + ], + "dna_sequence": "ATGAAAATCGGCACACAGAATCAGGCGTTCTTTCCGGAAAACATTCTGGAGAAATTTCGTTATATCAAAGAGATGGGCTTCGATGGTTTTGAGATTGACGGCAAACTGCTGGTTAACAACATCGAAGAAGTCAAAGCGGCGATCAAAGAAACCGGTTTACCGGTGACCACCGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTCGTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTATCAGGATCATATGATCAACACCCTCGCCGATGCCCGCCGTTACATCGTCGAAAACGATCTTAAACATGTACAGATTATCGGCGATTTCTATCACATGAATATCGAAGAAGATAACCTGGCGCAGGCGCTGCATGACAACCGCGACCTGCTCGGTCATGTGCATATTGCGGATAACCATCGCTACCAGCCGGGCAGCGGCACCCTGGATTTCCACGCGCTGTTTGAACAGCTGCGCGCGGATAACTATCAGGGCTATGTAGTGTACGAAGGGCGTATCCGGGCGGAAGATCCTGCCCAGGCGTACCGTGATTCGTTGGCCTGGTTGCGTACCTGCTAA", + "dna_sequence_length": 789, + "functions": [ + "putative TIM alpha/beta barrel enzyme" + ], + "id": "CDS_1299", + "location": [ + [ + "NC_000913", + 1376034, + "+", + 789 + ] + ], + "md5": "db03eec6d4d6a859aef9d24ba067daab", + "parent_gene": "", + "protein_md5": "bd0e98425bc48d75d410637d99969836", + "protein_translation": "MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYEGRIRAEDPAQAYRDSLAWLRTC", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004416" + ], + [ + "gene_synonym", + "ECK1310" + ], + [ + "gene_synonym", + "EcoGene:EG13916" + ], + [ + "gene_synonym", + "GI:16129276" + ], + [ + "gene_synonym", + "GeneID:948589" + ], + [ + "gene_synonym", + "JW1308" + ], + [ + "gene_synonym", + "NP_415831.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77503" + ], + [ + "gene_synonym", + "b1315" + ], + [ + "gene_synonym", + "ycjS" + ] + ], + "dna_sequence": "GTGAAAAGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCTGGCAGAAAAATACGGGAATGCATCCGTGTGGGACGATCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCCGCGCCCTGCGTCGCTGCGGCGTTCCCGGCTGGGGTGTCTTTACCAATAAAGAACTGCAGGGTGGTGGCCCGCTGATCGACATCGGCATTCATATGCTGGATGCTGCGATGTATGTGCTGGGCTTTCCGGCGGTGAAAAGCGTGAATGCGCATAGCTTTCAAAAGATCGGCACGCAAAAGAGCTGTGGTCAATTTGGTGAGTGGGATCCGGCAACTTACAGCGTCGAAGATTCGCTGTTTGGCACCATTGAATTTCATAACGGCGGCATTCTGTGGCTGGAAACGTCATTTGCACTCAACATCCGCGAACAGTCGATTATGAACGTCAGCTTTTGTGGTGATAAAGCTGGTGCGACGCTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGA", + "dna_sequence_length": 1056, + "functions": [ + "putative NADH-binding oxidoreductase" + ], + "id": "CDS_1300", + "location": [ + [ + "NC_000913", + 1376832, + "+", + 1056 + ] + ], + "md5": "6f4113f8c3ade341e2ba28e6d7d635ff", + "parent_gene": "", + "protein_md5": "dcd63166568ea149de098bc50e8789eb", + "protein_translation": "MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL", + "protein_translation_length": 351, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004418" + ], + [ + "gene_synonym", + "ECK1311" + ], + [ + "gene_synonym", + "EcoGene:EG13917" + ], + [ + "gene_synonym", + "GI:16129277" + ], + [ + "gene_synonym", + "GeneID:945895" + ], + [ + "gene_synonym", + "JW1309" + ], + [ + "gene_synonym", + "NP_415832.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77154" + ], + [ + "gene_synonym", + "b1316" + ], + [ + "gene_synonym", + "ycjT" + ] + ], + "dna_sequence": "ATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAGGGGAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTACACGCGCCAGACGCGAGGGATGTATCTGGCGGGGCTGTATCATCGGGCGGGAAAAGGTGAAATCAACGAACTGGTGAACCTGCCTGATGTCGTGGGGATGGAGATTGCCATAAATGGTGAGGTTTTCTCGTTATCCCACGAAGCCTGGCAGCGTGAGCTTGACTTTGCCAGTGGCGAATTACGCCGCAATGTTGTCTGGCGTACCAGCAACGGCTCAGGTTACACCATCGCCAGCCGTCGCTTTGTTTCGGCAGACCAACTGCCGCTCATTGCGCTGGAAATCACTATTACGCCACTGGACGCCGACGCGTCAGTGCTGATTTCAACAGGCATTGACGCCACGCAAACCAATCACGGTCGCCAACATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATCTGATGCAGGGGAGCTACACCACCCAGGATGGACGCAGTGATGTGGCCATCAGCTGTTGCTGTAAGGTGAGCGGTGATGTGCAGCAATGCTATACCGCCAAAGAGCGCCGTTTACTGCAACATACCAGTGCGCAGCTTCATGCAGGCGAGACAATGACGTTGCAAAAACTGGTGTGGATCGACTGGCGGGATGACAGGCAAGCTGCTTTAGACGAGTGGGGCAGCGCGTCGCTTCGCCAGCTTGAAATGTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGCGGCAAAAGGCTTAACCGGCGAAGGCTACAAAGGCCACGTTTTCTGGGATACAGAAGTATTTTTGTTACCGTTTCATCTGTTTAGCGATCCGACGGTTGCCCGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCAGGCGCGCAGGAGAAAGCGCGACGCAACGGCTGGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACATCATCTGGTGGCCGATATCGCCTGGGCGGTTATTCAATACTGGCAGACCACGGGGGATGAAAGTTTCATTGCGCATGAAGGCATGGCGCTACTTCTGGAGACGGCAAAGTTCTGGATTAGCCGCGCGGTGAGAGTTAACGATCGTCTGGAAATTCATGATGTTATTGGGCCAGACGAATATACCGAACATGTCAATAATAATGCATACACCAGCTATATGGCCCGCTACAACGTTCAACAGGCGCTGAATATTGCCCGCCAGTTCGGCTGTAGCGACGATGCGTTTATCCATCGCGCCGAAATGTTCCTCAAAGAGCTATGGATGCCAGAAATTCAGCCCGACGGCGTTTTGCCGCAGGATGATTCGTTTATGGCTAAGCCGGCGATTAATCTGGCGAAATACAAAGCGGCGGCGGGGAAGCAAACCATACTGCTGGATTATTCACGCGCAGAAGTGAACGAGATGCAGATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGCGAGGGGACTGAAATCGATCTTGGTGCTGATCCGCATAGTTGTGATGATGGTATCCATGCTGCCGCAACTGGCGCTATCTGGCTGGGGGCGATTCAGGGTTTTGCCGGGGTGAGCGTGCGTGACGGTGAATTGCATCTCAATCCGGCGTTACCTGAGCAGTGGCAACAGTTGTCTTTCCCTCTGTTCTGGCAGGGCTGCGAATTACAGGTCACTCTTGACGCGCAGCGTATTGCGATTCGAACTTCTGCGCCCGTTTCACTGCGTTTGAACGGTCAGCTTATAACCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGA", + "dna_sequence_length": 2268, + "functions": [ + "putative family 65 glycosyl hydrolase" + ], + "id": "CDS_1301", + "location": [ + [ + "NC_000913", + 1377884, + "+", + 2268 + ] + ], + "md5": "13643e2fb1d8fcccfbfca0e77c4952ee", + "parent_gene": "", + "protein_md5": "058d060da2dbd5f313c82d9e343c3550", + "protein_translation": "MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEVFSLSHEAWQRELDFASGELRRNVVWRTSNGSGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGSYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETMTLQKLVWIDWRDDRQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAYTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLITVAEESVFCLGDFILPFNGTATKHQEDE", + "protein_translation_length": 755, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004420" + ], + [ + "gene_synonym", + "ECK1312" + ], + [ + "gene_synonym", + "EcoGene:EG13918" + ], + [ + "gene_synonym", + "GI:16129278" + ], + [ + "gene_synonym", + "GeneID:945891" + ], + [ + "gene_synonym", + "JW1310" + ], + [ + "gene_synonym", + "NP_415833.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77366" + ], + [ + "gene_synonym", + "b1317" + ], + [ + "gene_synonym", + "ycjU" + ] + ], + "dna_sequence": "ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATCCCTAAAAGGGATCAGCCGCGATGAGTCTCTGCGGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACTCGCAGGAGAGGGCGCAACTGGCGTATCGCAAAAATCTGCTCTATGTCCACTCACTACGCGAGTTGACGGTCAACGCTGTTCTACCCGGCATTCGCTCTTTGCTGGCAGATCTCCGTGCACAGCAGATCTCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGCGAGTTTTTCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCAGGGCTGGGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTCGGTGGGGATCGGCGCGGGCTTAACCGGGGCGCAATTACTGTTGCCTTCAACGGAATCACTCACCTGGCCGCGGTTATCGGCCTTCTGGCAAAACGTATAG", + "dna_sequence_length": 660, + "functions": [ + "beta-phosphoglucomutase" + ], + "id": "CDS_1302", + "location": [ + [ + "NC_000913", + 1380148, + "+", + 660 + ] + ], + "md5": "8e8a772186db96df93667c15ff130490", + "parent_gene": "", + "protein_md5": "bf9e983c20f62225bfb3640f02791fad", + "protein_translation": "MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004422" + ], + [ + "gene_synonym", + "ASAP:ABE-0285045" + ], + [ + "gene_synonym", + "ECK1313" + ], + [ + "gene_synonym", + "EcoGene:EG13919" + ], + [ + "gene_synonym", + "GeneID:4306141" + ], + [ + "gene_synonym", + "JW1311" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77481" + ], + [ + "gene_synonym", + "b4524" + ], + [ + "gene_synonym", + "ycjV" + ], + [ + "gene_synonym", + "ymjB" + ] + ], + "dna_sequence": "ATGGCTCAGCTTTCGTTACAACATATTCAAAAAATCTACGATAACCAGGTGCATGTGGTGAAGGACTTCAACCTGGAAATTGCCGATAAAGAGTTCATCGTGTTTGTCGGCCCGTCGGGCTGCGGTAAGTCGACCACCCTGCGCATGATTGCCGGGCTTGAGGAGATCAGCGGCGGCGATCTGTTGATCGACGGCAAACGAATGAATGACGTTCCAGCCAAAGCACGCAATATAGCGATGGTGTTCCAGAACTACGCGTTGTATCCGCATATGACGGTTTACGACAACATGGCGTTTGGTCTGAAGATGCAAAAAATCGCCAAAGAGGTGATTGATGAGCGGGTGAACTGGGCGGCGCAAATTCTCGGCCTGCGTGAGTACCTGAAACGTAAGCCGGGGGCGCTTTCCGGCGGGCAACGTCAGCGAGTGGCGCTTGGGCGGGCGATTGTACGCGAAGCGGGCGTGTTTTTAATGGATGAACCGCTCTCTAACCTTGATGCCAAGCTGCGCGTGCAAATGCGCGCAGAGATCAGCAAGCTGCATCAGAAACTGAACACCACCATGATCTACGTGACCCACGATCAGACCGAAGCGATGACCATGGCGACGCGGATTGTGATTATGAAAGACGGGATTGTTCAGCAAGTAGGTGCGCCGAAAACCGTTTATAACCAACCCGCGAATATGTTTGTTTCCGGATTTATTGGATCACCAGCGATGAATTTTATTCGCGGCACGATCGATGGCGATAAATTCGTTACGGAAACGCTTAAATTAACCATTCCCGAAGAGAAATTAGCGGTTCTGAAAACACAGGAAAGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAA", + "dna_sequence_length": 1083, + "id": "CDS_1303", + "location": [ + [ + "NC_000913", + 1380821, + "+", + 957 + ], + [ + "NC_000913", + 1381777, + "+", + 126 + ] + ], + "md5": "88fb1aa372714e822a63d2fe36953fa1", + "parent_gene": "", + "protein_md5": "99c12948a8d9093ce02bbf572c2c4219", + "protein_translation": "MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETEIAIR", + "protein_translation_length": 360, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004425" + ], + [ + "gene_synonym", + "ECK1315" + ], + [ + "gene_synonym", + "EcoGene:EG13428" + ], + [ + "gene_synonym", + "GI:16129280" + ], + [ + "gene_synonym", + "GeneID:945889" + ], + [ + "gene_synonym", + "JW1312" + ], + [ + "gene_synonym", + "NP_415835.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76045" + ], + [ + "gene_synonym", + "b1319" + ], + [ + "gene_synonym", + "ompG" + ] + ], + "dna_sequence": "ATGAAAAAGTTATTACCCTGTACCGCACTGGTGATGTGTGCGGGAATGGCCTGCGCACAGGCCGAGGAAAGGAACGACTGGCACTTTAATATCGGCGCGATGTACGAAATAGAAAACGTCGAGGGTTATGGCGAAGATATGGATGGGCTGGCGGAGCCTTCAGTCTATTTTAATGCCGCCAACGGGCCGTGGAGAATTGCTCTGGCCTATTATCAGGAAGGGCCGGTAGATTATAGCGCGGGTAAACGTGGAACGTGGTTTGATCGCCCGGAGCTGGAGGTGCATTATCAGTTCCTCGAAAACGATGATTTCAGTTTCGGCCTGACCGGCGGTTTCCGTAATTATGGTTATCACTACGTTGATGAACCGGGTAAAGACACGGCGAATATGCAGCGCTGGAAAATCGCGCCAGACTGGGATGTGAAACTGACTGACGATTTACGTTTCAACGGTTGGTTGTCGATGTATAAATTTGCCAACGATCTGAACACTACCGGTTACGCTGATACCCGTGTCGAAACGGAAACAGGTCTGCAATATACCTTCAACGAAACGGTTGCCTTGCGAGTGAACTATTATCTCGAGCGCGGCTTCAATATGGACGACAGCCGCAATAACGGTGAGTTTTCCACGCAAGAAATTCGCGCCTATTTGCCGCTGACGCTCGGCAACCACTCGGTGACGCCGTATACGCGCATTGGGCTGGATCGCTGGAGTAACTGGGACTGGCAGGATGATATTGAACGTGAAGGCCATGATTTTAACCGTGTAGGTTTATTTTACGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGA", + "dna_sequence_length": 906, + "functions": [ + "outer membrane porin G" + ], + "id": "CDS_1304", + "location": [ + [ + "NC_000913", + 1381947, + "+", + 906 + ] + ], + "md5": "aa47fc2100508b6da932d8fbe4d50764", + "parent_gene": "", + "protein_md5": "eea0ea7000d510eae36efc9635e61a16", + "protein_translation": "MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004428" + ], + [ + "gene_synonym", + "ECK1316" + ], + [ + "gene_synonym", + "EcoGene:EG13920" + ], + [ + "gene_synonym", + "GI:16129281" + ], + [ + "gene_synonym", + "GeneID:945875" + ], + [ + "gene_synonym", + "JW1313" + ], + [ + "gene_synonym", + "NP_415836.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77615" + ], + [ + "gene_synonym", + "b1320" + ], + [ + "gene_synonym", + "ycjW" + ] + ], + "dna_sequence": "ATGTCCCCTACTATTTATGATATTGCCAGGGTTGCAGGCGTATCAAAATCCACCGTATCACGCGTGCTGAATAAGCAAACTAATATCTCCCCGGAAGCGCGCGAAAAAGTGTTACGGGCCATTGAAGAATTACAGTATCAGCCAAACAAGCTGGCCCGCGCGCTGACCTCTTCGGGTTTTGATGCCATTATGGTGATTTCTACCCGTTCGACCAAAACTACGGCGGGTAATCCGTTTTTCTCTGAAGTTTTGCATGCCATCACCGCCAAAGCTGAAGAAGAAGGTTTCGACGTGATATTACAAACGTCGCACAATCCGGCAGAAGATCTGCAAAAATGCGAAAGCAAAATTAAGCAGAAAATGATTAAAGGCATTATTATGCTCAGTTCGCCAGCGGATGAGTCATTTTTTGCCCAACTCGATAAATATGATATTCCGGTGGTGGTGATTGGCAAAGTTGAAGGTCAATATGCCCATGTTTATTCTGTCGATACCGATAATTTTGGCGACAGCATTGCGTTGACCGATGCATTAATTGAAAGTGGGCATCAAAATATTGCCTGCCTGCATGCTCCGCTTGATGTCCATGTTTCGGTTGATCGCGTTAATGGTTATAAGCAGAGCCTGGCTGCGCATAATATTGCAGTGCGTGATGAATGGATTGTTGATGGCGGTTATACCCATGAAACTGCATTAAAAGCAGCACGGCAATTATTAAGCCAGTCACCGTTGCCTGAGGCGGTGTTTGCCACTGACAGCCTGAAATTAATGAGCATTTATCGTGCGGCAGCAGAGAAAAATATTGCTATTCCGCAGCAGTTAGCGGTGGTGGGTTATAGCAATGAAACGCTGTCATTTATTTTAACGCCTGCACCGGGCGGCATCGATGTTCCGACGCAGGAGTTAGGTCAACAAAGCTGCGAGTTATTATTCCGCTTAATTTCTGGAAAACCGTCACCACAGAATATTACCGTTGCCACGCATATGACGCTGAAATAA", + "dna_sequence_length": 999, + "functions": [ + "LacI family putative transcriptional repressor" + ], + "id": "CDS_1305", + "location": [ + [ + "NC_000913", + 1383961, + "-", + 999 + ] + ], + "md5": "15c3e532842fd2094d6d8b736a21985f", + "parent_gene": "", + "protein_md5": "824ecaee6b51f396712abd398e458f30", + "protein_translation": "MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHVYSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALKAARQLLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004433" + ], + [ + "gene_synonym", + "ECK1317" + ], + [ + "gene_synonym", + "EcoGene:EG13921" + ], + [ + "gene_synonym", + "GI:16129282" + ], + [ + "gene_synonym", + "GeneID:945872" + ], + [ + "gene_synonym", + "JW1314" + ], + [ + "gene_synonym", + "NP_415837.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76046" + ], + [ + "gene_synonym", + "b1321" + ], + [ + "gene_synonym", + "ycjX" + ] + ], + "dna_sequence": "ATGAAGCGACTTAAAAATGAACTCAATGCGCTGGTGAATCGGGGTGTCGACAGACATCTGCGCCTCGCTGTAACCGGACTTAGCCGCAGCGGCAAAACAGCGTTTATCACCGCGATGGTTAATCAGTTGCTTAATATTCACGCCGGAGCACGTTTGCCGCTGTTAAGTGCGGTGCGTGAAGAGCGCCTGCTGGGCGTGAAACGCATTCCCCAGCGTGACTTTGGCATTCCGCGCTTCACCTATGACGAAGGGCTGGCGCAGTTATATGGCGATCCACCCGCCTGGCCAACGCCAACGCGCGGCGTCAGTGAAATCCGCCTGGCGCTACGTTTTAAATCGAATGATTCGCTGCTACGCCACTTTAAGGATACCTCCACGCTGTATCTGGAAATTGTGGATTATCCCGGCGAATGGTTGCTCGACCTGCCGATGCTGGCGCAGGACTATTTAAGCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCAGGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGTCCAAACTGGCGCAGGCCGATAAGCATACCAATGCCGGAATGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGATATGCGTCTGGCACTGACGCAGCTGATGCAAAGTTTTCACTACGGGCAGCGTACCCTGTTCCGGCGTTTGTTTTCGCCGGTTATCGATAAGCTATTGTTTGCTGCCACTAAAGCGGACCATGTGACCATCGATCAGCACGCTAATATGGTTTCATTACTGCAACAACTGATTCAGGATGCCTGGCAAAATGCGGCGTTCGAAGGGATCAGCATGGACTGCCTGGGGCTGGCGTCAGTTCAGGCGACCACCAGCGGCATTATTGATGTTAACGGTGAGAAAATCCCGGCGCTGCGTGGTAATCGACTTAGCGATGGCGCACCGCTCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCAGGTGATGGATGTCGACAAACCACTACCGCATATTCGTCTTGATGCTGCGCTGGAATTTTTAATAGGAGATAAATTGCGATGA", + "dna_sequence_length": 1398, + "functions": [ + "DUF463 family protein, puatative P-loop NTPase" + ], + "id": "CDS_1306", + "location": [ + [ + "NC_000913", + 1384117, + "+", + 1398 + ] + ], + "md5": "d78b23a431057d15310425f3c3375381", + "parent_gene": "", + "protein_md5": "d7417224c85440ccbd03f55745bc8c2f", + "protein_translation": "MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004436" + ], + [ + "gene_synonym", + "ECK1318" + ], + [ + "gene_synonym", + "EcoGene:EG12870" + ], + [ + "gene_synonym", + "GI:16129283" + ], + [ + "gene_synonym", + "GeneID:945878" + ], + [ + "gene_synonym", + "JW1315" + ], + [ + "gene_synonym", + "NP_415838.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8R7" + ], + [ + "gene_synonym", + "b1322" + ], + [ + "gene_synonym", + "ycjF" + ] + ], + "dna_sequence": "ATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCAGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTAATGGACGCAGCGTTACGTCCGAAACGCAGCCTGTGGCGCAAAATGGTGATGGGAGGGCTGGCTCTGTTTGGCGCAAGCGTTGTCGGGCAGGGTGTACAGTGGACAATGAATGCCTGGCAAACCCAGGACTGGGTGGCGCTGGGTGGATGTGCCGCTGGGGCATTGATTATCGGCGCTGGCGTAGGTTCTGTGGTAACAGAGTGGCGGCGCTTATGGCGCTTGCGACAGCGCGCCCATGAACGCGACGAAGCGCGTGATTTATTGCATAGCCACGGCACGGGCAAAGGCCGCGCATTTTGCGAAAAACTGGCGCAGCAGGCGGGTATTGATCAGTCGCATCCGGCGCTGCAACGCTGGTATGCCTCAATCCATGAAACGCAAAACGACCGTGAAGTGGTCAGCCTGTATGCGCATTTGGTCCAGCCAGTTTTAGATGCCCAGGCGCGGCGCGAAATCAGCCGTTCGGCGGCGGAATCAACGTTGATGATTGCGGTCAGCCCGCTGGCGTTGGTCGATATGGCGTTTATCGCCTGGCGCAATCTGCGTTTAATTAATCGCATCGCCACGCTGTATGGCATTGAACTGGGGTATTACAGCCGTTTGCGTCTGTTTAAGCTGGTATTGCTGAATATCGCTTTTGCCGGAGCCAGCGAACTGGTGCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCAGCTTATCGGTCAGGTGAAAGAAACGCTGCAAAAAGGCAAAACGCCCAGCGAAAAATAA", + "dna_sequence_length": 1062, + "functions": [ + "UPF0283 family inner membrane protein" + ], + "id": "CDS_1307", + "location": [ + [ + "NC_000913", + 1385511, + "+", + 1062 + ] + ], + "md5": "ca6bcadd9cfe68d61e36ee374131860d", + "parent_gene": "", + "protein_md5": "48db9e65d08ec3300ab00844891161d9", + "protein_translation": "MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDEAQEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004440" + ], + [ + "gene_synonym", + "ECK1319" + ], + [ + "gene_synonym", + "EcoGene:EG11042" + ], + [ + "gene_synonym", + "GI:16129284" + ], + [ + "gene_synonym", + "GeneID:945879" + ], + [ + "gene_synonym", + "JW1316" + ], + [ + "gene_synonym", + "NP_415839.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07604" + ], + [ + "gene_synonym", + "b1323" + ], + [ + "gene_synonym", + "tyrR" + ] + ], + "dna_sequence": "ATGCGTCTGGAAGTCTTTTGTGAAGACCGACTCGGTCTGACCCGCGAATTACTCGATCTACTCGTGCTAAGAGGCATTGATTTACGCGGTATTGAGATTGATCCCATTGGGCGAATCTACCTCAATTTTGCTGAACTGGAGTTTGAGAGTTTCAGCAGTCTGATGGCCGAAATACGCCGTATTGCGGGTGTTACCGATGTGCGTACTGTCCCGTGGATGCCTTCCGAACGTGAGCATCTGGCGTTGAGCGCGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGAAAATGATCAACACGTCCTGACCGGTGCGGTGGTGATGTTGCGATCAACGATTCGTATGGGCCGCCAGTTGCAAAATGTCGCCGCCCAGGACGTCAGCGCCTTCAGTCAAATTGTCGCCGTCAGCCCGAAAATGAAGCATGTTGTCGAACAGGCGCAGAAACTGGCGATGCTAAGCGCGCCGCTGCTGATTACGGGTGACACAGGTACAGGTAAAGATCTCTTTGCCTACGCCTGCCATCAGGCAAGCCCCAGAGCGGGCAAACCTTACCTGGCGCTGAACTGTGCGTCTATACCGGAAGATGCGGTCGAGAGTGAACTGTTTGGTCATGCTCCGGAAGGGAAGAAAGGATTCTTTGAGCAGGCGAACGGTGGTTCGGTGCTGTTGGATGAAATAGGGGAAATGTCACCACGGATGCAGGCGAAATTACTGCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGACTGTCCGCAGGACATCATGCCGTTAACTGAGCTGTTCGTCGCCCGCTTTGCCGACGAGCAGGGCGTGCCGCGTCCGAAACTGGCCGCTGACCTGAATACTGTACTTACGCGTTATGCGTGGCCGGGAAATGTGCGGCAGTTAAAGAACGCTATCTATCGCGCACTGACACAACTGGACGGTTATGAGCTGCGTCCACAGGATATTTTGTTGCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAA", + "dna_sequence_length": 1542, + "functions": [ + "aromatic amino acid biosynthesis and transport regulon transcriptional regulator", + "autorepressor", + "ATPase", + "phosphatase" + ], + "id": "CDS_1308", + "location": [ + [ + "NC_000913", + 1386720, + "+", + 1542 + ] + ], + "md5": "5703597cd184aea29b53a9bc8aef031e", + "parent_gene": "", + "protein_md5": "2d30e9c6a468d54a6af5c09e8e9ff6b1", + "protein_translation": "MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQKKNEE", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004442" + ], + [ + "gene_synonym", + "ECK1320" + ], + [ + "gene_synonym", + "EcoGene:EG12672" + ], + [ + "gene_synonym", + "GI:16129285" + ], + [ + "gene_synonym", + "GeneID:945880" + ], + [ + "gene_synonym", + "JW1317" + ], + [ + "gene_synonym", + "NP_415840.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A862" + ], + [ + "gene_synonym", + "b1324" + ], + [ + "gene_synonym", + "tpx" + ], + [ + "gene_synonym", + "yzzJ" + ] + ], + "dna_sequence": "ATGTCACAAACCGTTCATTTCCAGGGCAACCCGGTTACAGTCGCCAATTCCATCCCGCAGGCGGGTAGCAAAGCGCAGACTTTTACTCTCGTGGCAAAAGATCTGTCTGACGTCACCCTCGGTCAGTTTGCGGGTAAACGCAAAGTGCTGAACATTTTCCCGAGTATTGATACCGGTGTTTGCGCCGCATCAGTACGTAAGTTTAACCAACTGGCAACTGAGATCGACAACACCGTTGTGCTGTGTATCTCTGCCGATCTGCCGTTCGCCCAGTCTCGTTTCTGCGGCGCAGAAGGTCTGAACAACGTTATCACCCTCTCCACTTTCCGTAACGCTGAATTTCTGCAAGCTTACGGTGTGGCAATTGCTGATGGCCCACTGAAAGGTCTGGCAGCGCGTGCCGTTGTGGTTATTGACGAAAATGACAATGTGATTTTCAGCCAGCTGGTGGATGAAATCACCACCGAGCCGGATTACGAAGCAGCTCTGGCTGTACTGAAAGCATAA", + "dna_sequence_length": 507, + "functions": [ + "lipid hydroperoxide peroxidase" + ], + "id": "CDS_1309", + "location": [ + [ + "NC_000913", + 1388811, + "-", + 507 + ] + ], + "md5": "2779bc4e978bde19cd23e53c9649ef49", + "parent_gene": "", + "protein_md5": "01b386065c3f2d61e5463a7369bbc6c7", + "protein_translation": "MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA", + "protein_translation_length": 168, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004448" + ], + [ + "gene_synonym", + "ECK1321" + ], + [ + "gene_synonym", + "EcoGene:EG13228" + ], + [ + "gene_synonym", + "GI:90111249" + ], + [ + "gene_synonym", + "GeneID:946013" + ], + [ + "gene_synonym", + "JW1318" + ], + [ + "gene_synonym", + "NP_415841.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P51981" + ], + [ + "gene_synonym", + "b1325" + ], + [ + "gene_synonym", + "ycjG" + ], + [ + "gene_synonym", + "ycjH" + ] + ], + "dna_sequence": "ATGAGAACCGTTAAGGTATTCGAGGAAGCCTGGCCCTTACATACCCCGTTTGTGATTGCCCGGGGAAGTCGCAGTGAAGCGCGCGTGGTGGTGGTTGAACTGGAAGAAGAGGGTATTAAAGGCACCGGCGAATGCACGCCGTATCCGCGTTATGGGGAAAGTGATGCCTCGGTAATGGCGCAAATTATGAGCGTCGTGCCGCAACTAGAGAAAGGGCTGACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATGCGCTGGATTGTGCATTGTGGGATCTGGCCGCGCGAAGACAGCAGCAATCGCTGGCTGATTTGATCGGCATAACGCTTCCCGAGACAGTTATCACTGCACAGACGGTTGTCATCGGTACGCCTGATCAGATGGCCAATAGTGCATCAACACTCTGGCAGGCAGGCGCGAAATTACTGAAAGTGAAGCTGGATAACCATCTTATCAGTGAGCGGATGGTGGCAATTCGCACAGCTGTGCCCGATGCGACGCTGATCGTTGATGCAAATGAATCCTGGCGTGCAGAAGGGTTGGCGGCGCGTTGCCAGCTATTGGCGGATTTAGGCGTTGCGATGCTTGAACAACCGCTTCCTGCGCAGGACGATGCGGCGCTGGAGAATTTTATTCATCCGTTGCCGATTTGTGCTGATGAAAGTTGTCATACTCGTAGCAATTTGAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCATGTTGTGTACCTCTCGTGCCATTAGCGCCGCTTTACCGCTGGTGCCGCAGGTCAGTTTCGCCGATCTTGACGGACCGACCTGGCTGGCGGTAGATGTGGAACCGGCGCTTCAGTTCACGACGGGCGAATTGCATCTTTAG", + "dna_sequence_length": 966, + "functions": [ + "L-Ala-D/L-Glu epimerase" + ], + "id": "CDS_1310", + "location": [ + [ + "NC_000913", + 1388930, + "+", + 966 + ] + ], + "md5": "fac56afc4193529839e5f26e87c8e579", + "parent_gene": "", + "protein_md5": "f088bde994e5710a9914fd9272acb316", + "protein_translation": "MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGECTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARRQQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004450" + ], + [ + "gene_synonym", + "ECK1322" + ], + [ + "gene_synonym", + "EcoGene:EG13906" + ], + [ + "gene_synonym", + "GI:226524711" + ], + [ + "gene_synonym", + "GeneID:945969" + ], + [ + "gene_synonym", + "JW1319" + ], + [ + "gene_synonym", + "NP_415842.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV6" + ], + [ + "gene_synonym", + "b1326" + ], + [ + "gene_synonym", + "mpaA" + ], + [ + "gene_synonym", + "ycjI" + ] + ], + "dna_sequence": "ATGACCGTAACCCGCCCACGCGCCGAACGCGGCGCATTTCCGCCCGGAACAGAACATTACGGACGTTCATTATTGGGCGCGCCGTTAATCTGGTTTCCTGCCCCTGCAGCCAGCCGCGAAAGTGGTTTGATTCTGGCTGGCACTCACGGTGATGAAAACTCTTCGGTCGTCACGCTCTCCTGTGCTCTGCGGACGTTGACACCTTCTTTGCGCCGTCATCATGTGGTGCTGTGTGTGAATCCTGACGGCTGCCAGTTGGGGTTACGGGCCAATGCTAATGGTGTGGATTTAAACAGAAACTTTCCGGCGGCGAACTGGAAGGAAGGTGAAACCGTTTATCGCTGGAACAGCGCCGCTGAAGAACGCGATGTCGTATTACTGACAGGTGACAAACCTGGCTCCGAACCTGAAACCCAGGCGCTGTGCCAGCTTATACACCGCATTCAACCTGCCTGGGTGGTCTCATTCCACGATCCACTGGCCTGTATTGAAGATCCCAGACACAGCGAATTAGGCGAATGGCTGGCTCAGGCGTTTGAATTGCCTCTGGTAACCAGCGTCGGTTATGAAACGCCTGGCTCTTTCGGCAGTTGGTGTGCAGATCTGAACTTGCATTGCATCACCGCAGAGTTTCCGCCCATCTCCTCCGACGAAGCCAGCGAAAAATATCTCTTTGCGATGGCAAACTTGCTGCGCTGGCATCCTAAAGATGCAATTCGCCCGTCGTGA", + "dna_sequence_length": 729, + "functions": [ + "murein peptide amidase A" + ], + "id": "CDS_1311", + "location": [ + [ + "NC_000913", + 1390598, + "-", + 729 + ] + ], + "md5": "b2294063adedd6f2aed602d1fb4ec1e2", + "parent_gene": "", + "protein_md5": "0b4df7c8be0817a72aece9635c70217f", + "protein_translation": "MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEASEKYLFAMANLLRWHPKDAIRPS", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285046" + ], + [ + "gene_synonym", + "ECK1323" + ], + [ + "gene_synonym", + "EcoGene:EG14420" + ], + [ + "gene_synonym", + "GeneID:1450258" + ], + [ + "gene_synonym", + "JW5960" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EER5" + ], + [ + "gene_synonym", + "b4525" + ], + [ + "gene_synonym", + "ymjC" + ] + ], + "dna_sequence": "ATGAAAAATGTACTGATTCTTGGTGCTGGCGGTCAGATAGCCCGCCATGTGATTAATCAACTGGCAGATAAGCAAACCATTAAACAAACTTTATTTGCCCGTCAGCCAGCAAAAATCCACAAACCCTATCCAACTAAT", + "dna_sequence_length": 138, + "id": "CDS_1312", + "location": [ + [ + "NC_000913", + 1390862, + "-", + 138 + ] + ], + "md5": "a1fac700236f64c486795741ee6b2483", + "parent_gene": "", + "protein_md5": "967433850d4926fb66b98e299e73558f", + "protein_translation": "MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4488" + ], + [ + "gene_synonym", + "EcoGene:EG14478" + ], + [ + "gene_synonym", + "GeneID:7751617" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CD93" + ], + [ + "gene_synonym", + "b4673" + ], + [ + "gene_synonym", + "ymjD" + ] + ], + "dna_sequence": "ATGAAACATATTCAAATCCGCAATAGTGATATGGACTGGCATATTGCTGCCAATAATCTGGGATAA", + "dna_sequence_length": 66, + "id": "CDS_1313", + "location": [ + [ + "NC_000913", + 1390933, + "-", + 66 + ] + ], + "md5": "9b656fe262727702520ff898ebddfe07", + "parent_gene": "", + "protein_md5": "cc53a32bf34e0a3877491accc0c221a1", + "protein_translation": "MKHIQIRNSDMDWHIAANNLG", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004453" + ], + [ + "gene_synonym", + "ECK1324" + ], + [ + "gene_synonym", + "EcoGene:EG13922" + ], + [ + "gene_synonym", + "GI:221800781" + ], + [ + "gene_synonym", + "GeneID:945988" + ], + [ + "gene_synonym", + "JW5804" + ], + [ + "gene_synonym", + "NP_415843.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76049" + ], + [ + "gene_synonym", + "b1327" + ], + [ + "gene_synonym", + "ycjY" + ] + ], + "dna_sequence": "ATGATGAATAATAAAGTCAGCTTCACTAACAGCAATAATCCAACCATCTCTTTGTCTGCAGTGATCTATTTCCCTCCAAAATTTGATGAAACCCGTCAGTATCAGGCAATTGTGTTATCTCACCCAGGTGGGGGCGTTAAAGAACAAACGGCCGGAACCTATGCCAAAAAACTGGCGGAAAAGGGATTTGTCACTATTGCTTATGACGCATCTTATCAAGGTGAAAGTGGCGGCGAGCCGCGTCAGTTAGAAAACCCATACATTCGTACTGAAGACATCAGTGCCGTGATTGATTACCTGACAACGCTTTCTTATGTCGACAATACCCGAATTGGTGCGATGGGAATTTGTGCCGGTGCAGGATATACAGCCAATGCTGCAATTCAGGATCGCCGCATCAAGGCCATCGGTACCGTTAGTGCGGTCAATATTGGTTCGATATTCCGTAATGGTTGGGAAAACAATGTGAAATCTATTGATGCCCTGCCATACGTTGAAGCGGGTTCAAACGCCAGAACCAGCGATATTAGCAGCGGAGAATACGCCATTATGCCACTGGCACCAATGAAGGAGTCCGATGCGCCGAACGAAGAACTGCGTCAGGCCTGGGAGTATTACCACACCCCTCGCGCGCAGTATCCAACAGCACCGGGTTACGCTACTTTGCGCAGCCTTAACCAGATTATTACCTATGATGCTTACCATATGGCGGAAGTGTACCTGACTCAGCCGACGCAGATTGTGGCGGGCAGCCAGGCAGGGAGCAAATGGATGAGTGACGACCTGTACGATCGAGCATCAAGCCAGGATAAACGCTATCACATTGTTGAAGGCGCAAACCATATGGATCTTTATGACGGCAAAGCCTATGTGGCTGAAGCAATTTCAGTATTAGCTCCGTTCTTTGAGGAAACTCTGTAA", + "dna_sequence_length": 921, + "functions": [ + "S9 homolog non-peptidase family protein" + ], + "id": "CDS_1314", + "location": [ + [ + "NC_000913", + 1391853, + "-", + 921 + ] + ], + "md5": "5d0a829d9b08dcec80f04a135ebbea47", + "parent_gene": "", + "protein_md5": "222f6dd5ad5b5e8fa96c4f4148da425e", + "protein_translation": "MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004457" + ], + [ + "gene_synonym", + "ECK1325" + ], + [ + "gene_synonym", + "EcoGene:EG13923" + ], + [ + "gene_synonym", + "GI:16129289" + ], + [ + "gene_synonym", + "GeneID:945930" + ], + [ + "gene_synonym", + "JW1321" + ], + [ + "gene_synonym", + "NP_415844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77333" + ], + [ + "gene_synonym", + "b1328" + ], + [ + "gene_synonym", + "pgrR" + ], + [ + "gene_synonym", + "ycjZ" + ] + ], + "dna_sequence": "ATGAAGCGTGAAGAAATCGCTGATCTGATGGCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGCGTCGTATAGAAGAACGATTGGGATTGCGGCTTCTGACGCGAACCACGCGCAGCGTTGTTCCAACTGAAGCGGGCGAGCATCTTTTGTCTGTTCTTGGCCCTATGTTGCATGACATAGATTCAGCCATGGCATCCCTGAGCGATCTGCAGAACCGCCCATCCGGGACAATACGTATTACTACTGTAGAACATGCAGCAAAAACGATATTGTTACCAGCAATGCGCACATTCCTGAAATCGCATCCTGAAATTGATATTCAGCTCACCATTGATTATGGTTTGACCGATGTCGTTTCTGAACGTTTTGATGCAGGCGTCCGTCTGGGTGGGGAGATGGATAAAGATATGATCGCCATTCGAATCGGGCCAGATATACCAATGGCTATTGTTGGCTCACCGGATTATTTTTCTCGCCGAAGTGTTCCAACGTCAGTGTCACAATTAATAGATCATCAGGCAATTAATTTGTATCTTCCCACATCGGGTACAGCAAATCGCTGGAGATTAATACGCGGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGAAAAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTGCTGTTTAG", + "dna_sequence_length": 900, + "functions": [ + "murein peptide degradation regulator" + ], + "id": "CDS_1315", + "location": [ + [ + "NC_000913", + 1391991, + "+", + 900 + ] + ], + "md5": "711f0c4086750068dd3f2b37792b28f1", + "parent_gene": "", + "protein_md5": "35e42455de2c2a1e98cd2244438c9b2e", + "protein_translation": "MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004460" + ], + [ + "gene_synonym", + "ECK1326" + ], + [ + "gene_synonym", + "EcoGene:EG13376" + ], + [ + "gene_synonym", + "GI:90111250" + ], + [ + "gene_synonym", + "GeneID:945951" + ], + [ + "gene_synonym", + "JW1322" + ], + [ + "gene_synonym", + "NP_415845.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77348" + ], + [ + "gene_synonym", + "b1329" + ], + [ + "gene_synonym", + "mppA" + ], + [ + "gene_synonym", + "ynaH" + ] + ], + "dna_sequence": "ATGAAGCACTCTGTTTCAGTCACGTGTTGTGCGCTGTTGGTCAGCAGCATTTCTCTTTCGTATGCTGCAGAAGTTCCGAGCGGCACAGTACTGGCAGAGAAGCAGGAGCTGGTGCGCCACATTAAAGATGAGCCTGCGTCGCTGGATCCCGCTAAAGCCGTGGGCCTGCCAGAGATTCAGGTCATTCGCGATCTGTTTGAAGGTCTGGTGAATCAGAACGAAAAAGGGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAAAAGTAATGACAACCGTATCTGGACTTTTACCCTGCGCGATAACGCAAAATGGGCGGATGGCACACCGGTAACGGCGCAAGATTTTGTCTACAGCTGGCAACGTCTGGTGGACCCAAAAACATTGTCGCCATTTGCATGGTTTGCCGCGCTGGCGGGAATCAACAACGCACAGGCGATTATTGATGGTAAAGCTACGCCTGACCAGCTTGGCGTCACCGCAGTTGATGCCCATACTTTGAAAATTCAGCTTGATAAACCGTTGCCGTGGTTTGTGAATTTAACCGCTAACTTTGCCTTCTTCCCGGTGCAAAAAGCCAACGTAGAAAGCGGTAAAGAGTGGACGAAACCCGGAAATCTGATCGGCAATGGCGCTTATGTTCTTAAAGAGCGCGTAGTCAATGAAAAACTGGTCGTGGTACCGAATACCCATTATTGGGATAACGCCAAAACGGTACTGCAAAAAGTGACCTTCCTGCCAATTAATCAGGAATCCGCAGCCACTAAGCGTTACCTCGCGGGGGATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAGGAATGGAAAACCTATATCGATAGCCGTAACACCGGCAATTTTGATGTTATCCGCGCCTCGTGGGTGGGGGATTATAATGAACCCTCCACTTTCCTGACATTATTAACGTCAACGCATTCAGGAAATATTTCACGCTTTAACAATCCGGCATATGACAAAGTTCTGGCCCAGGCATCGACGGAAAATACCGTTAAAGCGCGTAATGCCGATTACAACGCGGCAGAAAAAATCCTCATGGAGCAAGCACCGATTGCACCAATTTATCAATATACCAATGGACGATTAATCAAGCCGTGGCTGAAAGGTTATCCCATTAATAATCCTGAAGATGTGGCGTACAGTCGGACTATGTATATTGTGAAGCATTGA", + "dna_sequence_length": 1614, + "functions": [ + "murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit" + ], + "id": "CDS_1316", + "location": [ + [ + "NC_000913", + 1393227, + "+", + 1614 + ] + ], + "md5": "e3ec326b22ce27c325ec538dfa20294b", + "parent_gene": "", + "protein_md5": "18783cf6b9c22b11ef751edeeb77a36d", + "protein_translation": "MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTAVDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERVVNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH", + "protein_translation_length": 537, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004462" + ], + [ + "gene_synonym", + "ECK1327" + ], + [ + "gene_synonym", + "EcoGene:EG13924" + ], + [ + "gene_synonym", + "GI:16129291" + ], + [ + "gene_synonym", + "GeneID:945898" + ], + [ + "gene_synonym", + "JW1323" + ], + [ + "gene_synonym", + "NP_415846.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEB5" + ], + [ + "gene_synonym", + "b1330" + ], + [ + "gene_synonym", + "ynaI" + ] + ], + "dna_sequence": "ATGATCGCTGAACTGTTTACAAATAATGCGCTTAATCTGGTCATTATTTTCGGTAGCTGCGCAGCATTGATTCTGATGAGCTTTTGGTTTCGCCGTGGAAATCGTAAAAGAAAAGGATTTTTATTCCATGCGGTGCAATTTTTAATCTACACCATAATTATCAGTGCTGTTGGTAGCATTATTAATTATGTTATAGAAAACTATAAACTCAAATTTATCACCCCAGGCGTTATCGATTTTATCTGTACGTCCCTGATTGCGGTTATTCTGACGATTAAGCTATTTCTGCTGATTAATCAGTTTGAAAAACAGCAGATTAAAAAAGGTCGCGATATCACCAGTGCGCGGATTATGTCGCGTATCATCAAAATCACCATTATTGTGGTGCTTGTTCTGCTTTATGGCGAACATTTCGGCATGAGCCTTTCTGGCTTGCTGACCTTTGGTGGTATTGGTGGTCTGGCTGTCGGTATGGCCGGTAAAGATATTCTGAGTAACTTCTTTTCCGGGATTATGCTCTATTTCGACCGTCCTTTCAGTATTGGCGACTGGATCCGTTCACCGGACAGAAATATCGAAGGTACAGTAGCGGAAATTGGCTGGCGAATTACCAAAATTACGACCTTTGATAATCGTCCATTGTACGTACCGAACTCGCTGTTTTCGTCGATCAGCGTAGAAAACCCAGGACGAATGACCAACCGCCGCATTACCACGACCATTGGTTTACGTTATGAGGATGCGGCAAAAGTGGGCGTTATTGTCGAAGCTGTACGTGAGATGCTGAAAAATCACCCGGCCATCGACCAGCGACAAACCTTACTGGTTTATTTCAACCAGTTTGCTGACTCTTCATTGAATATTATGGTTTATTGCTTTACCAAAACCACGGTATGGGCTGAATGGCTTGCTGCACAGCAAGACGTTTATTTGAAGATTATCGATATTGTACAGTCACACGGCGCGGACTTTGCCTTCCCCAGCCAGACGCTGTATATGGATAACATTACACCGCCGGAACAGGGTCGCTAA", + "dna_sequence_length": 1032, + "functions": [ + "mechanosensitive channel protein, very small conductance" + ], + "id": "CDS_1317", + "location": [ + [ + "NC_000913", + 1395922, + "-", + 1032 + ] + ], + "md5": "4994a00c580b1ed04457897bee257e17", + "parent_gene": "", + "protein_md5": "d4a403dcc47818d890ad52fb39fd443f", + "protein_translation": "MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004467" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16129292" + ], + [ + "gene_synonym", + "GeneID:945896" + ], + [ + "gene_synonym", + "NP_415847.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE52" + ], + [ + "gene_synonym", + "b1331" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_1318", + "location": [ + [ + "NC_000913", + 1396076, + "+", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004470" + ], + [ + "gene_synonym", + "ECK1328" + ], + [ + "gene_synonym", + "EcoGene:EG14294" + ], + [ + "gene_synonym", + "GI:16129293" + ], + [ + "gene_synonym", + "GeneID:945901" + ], + [ + "gene_synonym", + "JW1326" + ], + [ + "gene_synonym", + "NP_415848.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64445" + ], + [ + "gene_synonym", + "b1332" + ], + [ + "gene_synonym", + "ynaJ" + ] + ], + "dna_sequence": "ATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAACAGTACAATATTCCGCTGTCTGAGTGGACGACATCAATGTATGTGATTCAGTCATCGATGATTTTTGTTTATAGCCTGGTCTTTACTGTGTTGCTGGCAATCCCGTTGGGAATTTATTTCCTTGGCGGCGAAGAGCAGTAA", + "dna_sequence_length": 258, + "functions": [ + "DUF2534 family putative inner membrane protein" + ], + "id": "CDS_1319", + "location": [ + [ + "NC_000913", + 1397365, + "+", + 258 + ] + ], + "md5": "6fe9f666c20035136407df620e54ef07", + "parent_gene": "", + "protein_md5": "d0872fdca7764c1ba04cb966bae40205", + "protein_translation": "MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004472" + ], + [ + "gene_synonym", + "ECK1329" + ], + [ + "gene_synonym", + "EcoGene:EG11246" + ], + [ + "gene_synonym", + "GI:16129294" + ], + [ + "gene_synonym", + "GeneID:945904" + ], + [ + "gene_synonym", + "JW1327" + ], + [ + "gene_synonym", + "NP_415849.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAC0" + ], + [ + "gene_synonym", + "b1333" + ], + [ + "gene_synonym", + "uspE" + ], + [ + "gene_synonym", + "ydaA" + ] + ], + "dna_sequence": "ATGGCTATGTATCAGAACATGCTCGTTGTTATCGATCCTAACCAGGACGACCAACCAGCATTGCGGCGAGCTGTTTATTTACATCAACGGATTGGTGGCAAAATTAAAGCCTTTTTGCCGATCTATGACTTCTCATACGAAATGACCACCCTGCTCTCCCCGGACGAACGTACCGCTATGCGTCAGGGCGTCATCAGCCAGCGTACAGCCTGGATCCACGAGCAGGCAAAATATTATCTCAATGCTGGCGTTCCCATTGAAATTAAAGTGGTCTGGCATAACCGTCCTTTCGAAGCCATCATTCAGGAAGTGATCAGCGGCGGACACGATTTGGTGCTAAAAATGGCGCACCAACATGACCGTCTGGAAGCGGTGATTTTTACGCCAACGGACTGGCATCTGTTACGCAAATGCCCAAGCCCGGTGTGGATGGTGAAAGACCAGCCGTGGCCGGAAGGAGGCAAGGCGCTGGTGGCGGTGAATCTCGCCAGTGAAGAGCCGTATCATAATGCGCTCAATGAAAAACTGGTCAAAGAGACGATCGAACTGGCAGAACAAGTCAACCATACCGAAGTTCATCTGGTTGGCGCTTATCCGGTAACGCCAATTAATATCGCGATTGAACTGCCGGAATTTGACCCGAGCGTTTATAACGATGCCATTCGTGGGCAACATTTGCTGGCAATGAAAGCCCTGCGGCAGAAATTCGGCATTAATGAAAACATGACGCACGTAGAAAAAGGTCTGCCAGAAGAGGTGATTCCTGATTTGGCGGAGCACTTACAGGCGGGGATTGTGGTTCTGGGCACGGTAGGACGCACCGGTATTTCAGCAGCATTCCTCGGCAACACGGCGGAACAGGTGATTGATCATCTTCGCTGCGACCTGCTGGTCATTAAACCTGACCAGTATCAGACACCCGTTGAACTGGATGACGAAGAAGACGATTAA", + "dna_sequence_length": 951, + "functions": [ + "stress-induced protein" + ], + "id": "CDS_1320", + "location": [ + [ + "NC_000913", + 1398622, + "-", + 951 + ] + ], + "md5": "ba6664e5485173b56e34a6e76fd5d4e0", + "parent_gene": "", + "protein_md5": "716e68a97fbca16b35ec7ff2a5d22076", + "protein_translation": "MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQEVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAVNLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004475" + ], + [ + "gene_synonym", + "ECK1330" + ], + [ + "gene_synonym", + "EcoGene:EG10325" + ], + [ + "gene_synonym", + "GI:16129295" + ], + [ + "gene_synonym", + "GeneID:945908" + ], + [ + "gene_synonym", + "JW1328" + ], + [ + "gene_synonym", + "NP_415850.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9E5" + ], + [ + "gene_synonym", + "b1334" + ], + [ + "gene_synonym", + "fnr" + ], + [ + "gene_synonym", + "nirA" + ], + [ + "gene_synonym", + "nirR" + ], + [ + "gene_synonym", + "ossA" + ] + ], + "dna_sequence": "ATGATCCCGGAAAAGCGAATTATACGGCGCATTCAGTCTGGCGGTTGTGCTATCCATTGCCAGGATTGCAGCATCAGCCAGCTTTGCATCCCGTTCACACTCAACGAACATGAGCTTGATCAGCTTGATAATATCATTGAGCGGAAGAAGCCTATTCAGAAAGGCCAGACGCTGTTTAAGGCTGGTGATGAACTTAAATCGCTTTATGCCATCCGCTCCGGTACGATTAAAAGTTATACCATCACTGAGCAAGGCGACGAGCAAATCACTGGTTTCCATTTAGCAGGCGACCTGGTGGGATTTGACGCCATCGGCAGCGGCCATCACCCGAGCTTCGCGCAGGCGCTGGAAACCTCGATGGTATGTGAAATCCCGTTCGAAACGCTGGACGATTTGTCCGGTAAAATGCCGAATCTGCGTCAGCAGATGATGCGTCTGATGAGCGGTGAAATCAAAGGCGATCAGGACATGATCCTGCTGTTGTCGAAGAAAAATGCCGAGGAACGTCTGGCTGCATTCATCTACAACCTGTCCCGTCGTTTTGCCCAACGCGGCTTCTCCCCTCGTGAATTCCGCCTGACGATGACTCGTGGCGATATCGGTAACTATCTGGGCCTGACGGTAGAAACCATCAGCCGTCTGCTGGGTCGCTTCCAGAAAAGCGGCATGCTGGCAGTCAAAGGTAAATACATCACCATCGAAAATAACGATGCGCTGGCCCAGCTTGCTGGTCATACGCGTAACGTTGCCTGA", + "dna_sequence_length": 753, + "functions": [ + "oxygen-sensing anaerobic growth regulon transcriptional regulator FNR", + "autorepressor" + ], + "id": "CDS_1321", + "location": [ + [ + "NC_000913", + 1399526, + "-", + 753 + ] + ], + "md5": "1d20f7f68b44c59835cb058b1f5fed45", + "parent_gene": "", + "protein_md5": "1292da009aa32cef15c5f4f65ad64f77", + "protein_translation": "MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004486" + ], + [ + "gene_synonym", + "ECK1331" + ], + [ + "gene_synonym", + "EcoGene:EG10668" + ], + [ + "gene_synonym", + "GI:16129296" + ], + [ + "gene_synonym", + "GeneID:945853" + ], + [ + "gene_synonym", + "JW1329" + ], + [ + "gene_synonym", + "NP_415851.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFH0" + ], + [ + "gene_synonym", + "b1335" + ], + [ + "gene_synonym", + "ogt" + ] + ], + "dna_sequence": "ATGCTGAGATTACTTGAAGAAAAAATTGCCACGCCACTGGGTCCACTGTGGGTGATTTGCGATGAGCAATTTCGCCTGCGGGCGGTTGAATGGGAAGAGTACAGCGAACGCATGGTGCAGCTGCTGGACATCCATTATCGCAAAGAAGGCTATGAGCGCATTTCTGCCACCAATCCAGGCGGTTTAAGCGACAAGCTTCGTGAATATTTTGCCGGTAATCTTAGCATTATTGATACGCTTCCCACTGCTACGGGGGGGACGCCATTTCAGCGCGAAGTCTGGAAAACACTACGCACTATCCCCTGCGGGCAGGTAATGCATTACGGCCAACTGGCTGAGCAATTGGGCCGTCCTGGCGCGGCGCGTGCCGTTGGTGCGGCAAACGGATCGAATCCCATCAGCATCGTCGTACCTTGCCATCGGGTTATTGGCCGAAACGGCACCATGACCGGATATGCAGGCGGAGTTCAGCGAAAAGAGTGGTTATTGCGCCATGAAGGTTATCTTTTGCTGTAA", + "dna_sequence_length": 516, + "functions": [ + "O-6-alkylguanine-DNA:cysteine-protein methyltransferase" + ], + "id": "CDS_1322", + "location": [ + [ + "NC_000913", + 1400236, + "-", + 516 + ] + ], + "md5": "8342661c0ec2403517399eb0bc689de4", + "parent_gene": "", + "protein_md5": "6d46c043ac26f96f870efc1c8a95e57c", + "protein_translation": "MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEGYERISATNPGGLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPCGQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKEWLLRHEGYLLL", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004488" + ], + [ + "gene_synonym", + "ECK1332" + ], + [ + "gene_synonym", + "EcoGene:EG12853" + ], + [ + "gene_synonym", + "GI:90111251" + ], + [ + "gene_synonym", + "GeneID:945912" + ], + [ + "gene_synonym", + "JW5822" + ], + [ + "gene_synonym", + "NP_415852.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46133" + ], + [ + "gene_synonym", + "abgT" + ], + [ + "gene_synonym", + "b1336" + ], + [ + "gene_synonym", + "ydaH" + ] + ], + "dna_sequence": "ATGAGTATGTCATCCATACCGTCGTCCTCCCAATCCGGGAAGCTCTATGGCTGGGTCGAAAGAATTGGTAACAAGGTTCCCCATCCTTTTCTGCTCTTTATCTATTTGATTATCGTACTCATGGTGACGACGGCAATTTTGTCGGCCTTTGGCGTCAGTGCGAAAAACCCGACCGATGGTACGCCGGTCGTGGTGAAAAACCTGCTCAGTGTGGAAGGATTACACTGGTTTTTACCCAATGTTATTAAAAACTTTAGCGGTTTTGCTCCACTTGGTGCGATCCTGGCGCTGGTTTTAGGTGCCGGTCTGGCGGAGCGCGTCGGCTTACTGCCAGCACTAATGGTTAAAATGGCATCGCATGTTAATGCCCGCTACGCCAGTTATATGGTGCTGTTTATTGCTTTTTTCAGCCACATTTCTTCCGATGCGGCGTTAGTGATCATGCCACCGATGGGTGCGCTGATTTTTCTGGCGGTGGGCAGGCATCCAGTTGCAGGTTTACTGGCTGCCATTGCAGGCGTAGGTTGCGGCTTTACGGCTAATTTACTGATTGTCACAACCGACGTGTTGCTGTCGGGGATCAGCACGGAAGCGGCAGCTGCGTTCAATCCGCAAATGCACGTCAGTGTAATTGATAACTGGTATTTTATGGCCAGCTCCGTAGTCGTACTGACGATTGTTGGCGGCCTGATAACCGACAAAATCATCGAGCCACGGTTAGGTCAATGGCAGGGAAACAGCGATGAGAAACTGCAGACATTGACCGAAAGTCAGCGTTTTGGTTTACGCATAGCAGGTGTCGTATCGCTACTTTTTATTGCTGCGATTGCGCTGATGGTGATCCCGCAAAACGGGATATTGCGCGATCCGATTAATCACACCGTGATGCCATCACCCTTTATTAAAGGTATCGTGCCACTGATCATTCTTTTTTTCTTTGTTGTCTCGCTGGCTTATGGCATCGCTACCCGCACAATTCGACGTCAGGCGGATTTACCGCATTTAATGATTGAACCGATGAAAGAGATGGCGGGATTTATCGTGATGGTTTTTCCCCTCGCCCAATTTGTCGCCATGTTTAACTGGAGCAACATGGGGAAATTCATCGCCGTGGGGCTGACCGATATACTGGAAAGTTCAGGGCTTAGCGGCATCCCGGCGTTTGTCGGTCTGGCGTTGCTTTCCTCTTTCTTATGCATGTTTATTGCCAGCGGTTCCGCAATCTGGTCGATTCTCGCCCCCATTTTCGTACCAATGTTTATGCTACTTGGCTTTCACCCGGCATTTGCGCAAATCCTCTTTCGTATTGCCGACTCATCCGTATTGCCTTTAGCGCCGGTATCTCCTTTTGTTCCACTGTTTCTTGGATTCCTGCAACGCTACAAACCAGACGCGAAACTGGGTACTTACTATTCGTTAGTCTTGCCCTATCCACTTATCTTTTTGGTGGTATGGCTGCTGATGTTGCTGGCGTGGTATCTTGTCGGTCTGCCGATAGGTCCGGGTATTTACCCACGTTTGTCTTAA", + "dna_sequence_length": 1527, + "functions": [ + "p-aminobenzoyl-glutamate transporter", + "membrane protein" + ], + "id": "CDS_1323", + "location": [ + [ + "NC_000913", + 1401773, + "-", + 1527 + ] + ], + "md5": "794b776e73f3fd823f64d53372bcb3e2", + "parent_gene": "", + "protein_md5": "702ff14c6b727508646102b0358f94ca", + "protein_translation": "MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS", + "protein_translation_length": 508, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004491" + ], + [ + "gene_synonym", + "ECK1333" + ], + [ + "gene_synonym", + "EcoGene:EG13351" + ], + [ + "gene_synonym", + "GI:16129298" + ], + [ + "gene_synonym", + "GeneID:945950" + ], + [ + "gene_synonym", + "JW1331" + ], + [ + "gene_synonym", + "NP_415853.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76052" + ], + [ + "gene_synonym", + "abgB" + ], + [ + "gene_synonym", + "b1337" + ], + [ + "gene_synonym", + "ydaI" + ] + ], + "dna_sequence": "ATGCAGGAAATCTATCGTTTTATCGACGATGCGATTGAAGCCGATCGCCAACGTTATACCGATATTGCCGATCAAATCTGGGATCATCCAGAAACACGTTTTGAAGAGTTCTGGTCAGCGGAGCATCTGGCTTCGGCGCTGGAATCTGCAGGCTTCACCGTTACCCGCAACGTAGGCAATATCCCAAATGCCTTTATTGCTTCGTTTGGTCAAGGCAAACCGGTTATCGCCCTGCTGGGAGAATATGACGCCCTGGCAGGTTTAAGTCAGCAAGCAGGTTGCGCGCAACCTACATCCGTGACGCCCGGTGAAAATGGTCACGGTTGCGGACACAATTTGCTGGGAACCGCCGCCTTTGCCGCTGCAATAGCCGTCAAGAAATGGCTGGAACAATATGGGCAAGGCGGCACGGTGCGCTTTTATGGTTGTCCTGGCGAAGAAGGCGGCTCGGGTAAAACGTTCATGGTTCGCGAGGGGGTATTTGATGATGTGGATGCGGCACTCACCTGGCACCCGGAAGCCTTTGCCGGTATGTTCAATACCCGCACGCTGGCAAACATTCAGGCATCATGGCGCTTTAAAGGGATCGCAGCACATGCCGCGAATTCCCCTCATTTGGGACGCAGCGCCCTTGATGCCGTAACGTTGATGACCACTGGCACCAACTTCCTCAACGAACATATTATTGAAAAAGCGCGCGTACACTATGCCATCACAAATAGCGGCGGGATCTCGCCCAACGTGGTCCAGGCGCAGGCAGAAGTGCTTTATCTTATCCGCGCCCCCGAAATGACCGACGTGCAGCATATTTATGATCGGGTCGCCAAAATCGCCGAAGGTGCGGCATTGATGACCGAAACCACGGTTGAATGCCGCTTCGACAAAGCCTGTTCCAGTTATCTCCCGAATCGCACCTTAGAAAATGCCATGTACCAGGCCCTATCCCATTTTGGTACCCCGGAATGGAACTCCGAAGAACTGGCTTTTGCGAAACAAATTCAGGCTACGCTCACCTCCAACGATCGGCAAAACAGTCTGAATAATATCGCCGCAACCGGTGGCGAAAACGGCAAGGTTTTTGCACTACGTCATCGTGAAACGGTACTGGCGAATGAAGTCGCTCCATATGCCGCCACCGATAACGTGCTTGCGGCATCGACTGATGTCGGCGACGTCAGTTGGAAACTGCCTGTTGCCCAGTGTTTCAGCCCCTGTTTTGCCGTCGGTACACCGCTACATACGTGGCAACTGGTTAGCCAGGGGCGAACATCTATTGCTCATAAAGGAATGCTGCTGGCGGCGAAAACTATGGCAGCAACCACAGTCAATCTCTTCCTTGATTCAGGGCTATTGCAAGAATGCCAACAAGAGCATCAGCAAGTAACGGACACGCAACCGTATCACTGCCCTATCCCGAAAAACGTGACACCGTCACCTTTAAAATAA", + "dna_sequence_length": 1446, + "functions": [ + "p-aminobenzoyl-glutamate hydrolase, B subunit" + ], + "id": "CDS_1324", + "location": [ + [ + "NC_000913", + 1403255, + "-", + 1446 + ] + ], + "md5": "c638bb535f3a5acec2826a59ffe3c14a", + "parent_gene": "", + "protein_md5": "4d95e6661f6091988b6c68ec0ddb6b67", + "protein_translation": "MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK", + "protein_translation_length": 481, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004493" + ], + [ + "gene_synonym", + "ECK1334" + ], + [ + "gene_synonym", + "EcoGene:EG13352" + ], + [ + "gene_synonym", + "GI:90111252" + ], + [ + "gene_synonym", + "GeneID:945742" + ], + [ + "gene_synonym", + "JW5205" + ], + [ + "gene_synonym", + "NP_415854.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77357" + ], + [ + "gene_synonym", + "abgA" + ], + [ + "gene_synonym", + "b1338" + ], + [ + "gene_synonym", + "ydaJ" + ] + ], + "dna_sequence": "ATGGAGTCTTTGAATCAATTTGTTAATTCGCTTGCCCCAAAATTATCGCACTGGCGACGTGATTTTCATCACTATGCAGAGTCTGGCTGGGTGGAATTCCGCACTGCCACCCTTGTTGCGGAAGAATTGCACCAGCTCGGCTATTCACTGGCGCTGGGTCGCGAAGTAGTTAATGAAAGTAGCCGGATGGGATTACCTGATGAATTCACTCTACAACGCGAATTCGAGCGCGCTCGTCAACAGGGTGCGCTAGCACAATGGATTGCGGCTTTTGAAGGTGGTTTCACTGGTATCGTCGCCACCCTGGATACCGGTCGCCCCGGTCCGGTGATGGCTTTCCGTGTCGATATGGACGCGCTGGATCTCAGTGAAGAGCAGGATGTCAGCCATCGCCCCTACCGCGACGGTTTTGCGTCATGTAACGCCGGAATGATGCATGCCTGTGGTCATGATGGACATACCGCCATTGGGCTTGGGCTGGCGCATACCCTTAAACAGTTCGAGTCCGGACTACATGGCGTCATCAAACTGATTTTTCAGCCTGCAGAGGAAGGTACGCGTGGCGCGCGGGCGATGGTCGATGCAGGTGTCGTAGATGATGTTGATTATTTTACTGCCGTGCACATTGGCACTGGCGTACCTGCGGGCACCGTGGTGTGCGGCAGTGATAATTTTATGGCAACCACCAAATTTGACGCGCACTTCACCGGTACCGCCGCTCACGCAGGCGCAAAACCAGAAGACGGTCACAATGCCTTGTTGGCGGCAGCACAAGCCACTCTTGCACTGCATGCAATCGCCCCGCACAGCGAAGGAGCTTCCAGAGTAAACGTGGGCGTTATGCAGGCAGGAAGCGGTCGTAACGTTGTTCCTGCCTCGGCGTTGCTGAAAGTGGAAACACGCGGGGCCAGCGACGTCATTAATCAATATGTTTTTGACCGTGCACAACAAGCGATTCAGGGCGCAGCAACCATGTATGGTGTCGGCGTTGAAACTCGTCTGATGGGTGCAGCTACCGCCAGTTCTCCTTCGCCGCAATGGGTCGCATGGTTGCAAAGTCAGGCGGCTCAGGTCGCGGGGGTCAATCAGGCCATTGAACGTGTTGAAGCGCCTGCGGGTTCCGAAGATGCCACATTAATGATGGCCCGCGTGCAGCAACATCAAGGGCAAGCCTCCTACGTGGTGTTTGGCACACAGCTGGCGGCAGGTCATCACAACGAAAAATTCGATTTTGACGAGCAGGTTCTCGCTATTGCCGTCGAAACGCTGGCGCGCACCGCGCTCAATTTTCCCTGGACGCGAGGTATCTGA", + "dna_sequence_length": 1311, + "functions": [ + "p-aminobenzoyl-glutamate hydrolase, A subunit" + ], + "id": "CDS_1325", + "location": [ + [ + "NC_000913", + 1404565, + "-", + 1311 + ] + ], + "md5": "2215d8751bab33acb5f1e9f2ab980d59", + "parent_gene": "", + "protein_md5": "d2f2d677985ccf716b67afb1efe80d57", + "protein_translation": "MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI", + "protein_translation_length": 436, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004496" + ], + [ + "gene_synonym", + "ECK1335" + ], + [ + "gene_synonym", + "EcoGene:EG13353" + ], + [ + "gene_synonym", + "GI:16129300" + ], + [ + "gene_synonym", + "GeneID:945831" + ], + [ + "gene_synonym", + "JW1333" + ], + [ + "gene_synonym", + "NP_415855.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77744" + ], + [ + "gene_synonym", + "abgR" + ], + [ + "gene_synonym", + "b1339" + ], + [ + "gene_synonym", + "ydaK" + ] + ], + "dna_sequence": "ATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATATCTCGTTTTCATCAGCAGCATCCGCAGGTAAAAGTACGCATTATGGAAGGGCAACTGGTGTCGATGATTAATGAATTGCGTCAGGGAGAATTGGATTTCACCATCAATACCTATTATCAGGGACCGTACGACCACGAATTTACTTTTGAGAAATTACTGGAAAAGCAATTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGACGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAA", + "dna_sequence_length": 909, + "functions": [ + "putative DNA-binding transcriptional regulator of abgABT operon" + ], + "id": "CDS_1326", + "location": [ + [ + "NC_000913", + 1404741, + "+", + 909 + ] + ], + "md5": "f48a729cb3a2e466da24f160fb832d6b", + "parent_gene": "", + "protein_md5": "810f731677eaf50e3b0ee7b3a82bf294", + "protein_translation": "MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004502" + ], + [ + "gene_synonym", + "ECK1337" + ], + [ + "gene_synonym", + "EcoGene:EG13354" + ], + [ + "gene_synonym", + "GI:16129301" + ], + [ + "gene_synonym", + "GeneID:945953" + ], + [ + "gene_synonym", + "JW1334" + ], + [ + "gene_synonym", + "NP_415856.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76053" + ], + [ + "gene_synonym", + "b1340" + ], + [ + "gene_synonym", + "smrA" + ], + [ + "gene_synonym", + "ydaL" + ] + ], + "dna_sequence": "ATGAACCTTGACGACAAATCGCTGTTTCTTGACGCCATGGAAGATGTCCAGCCGCTGAAACGTGCTACCGATGTCCACTGGCATCCAACGCGTAACCAACGTGCGCCGCAGCGTATCGACACGCTGCAGCTTGATAATTTCCTCACCACCGGATTTCTCGACATCATCCCACTAAGTCAGCCGCTGGAGTTTCGGCGGGAAGGGTTGCAACATGGGGTGCTGGATAAGCTGCGCAGTGGTAAATATCCGCAACAGGCGAGCCTGAATCTTTTGCGCCAGCCGGTGGAAGAGTGCCGCAAAATGGTGTTCAGTTTTATTCAACAAGCCCTGGCGGATGGTTTGCGTAACGTGCTGATTATTCATGGTAAAGGGCGGGATGATAAATCGCATGCCAATATTGTCCGCAGCTATGTGGCGCGCTGGCTGACCGAATTTGATGATGTTCAGGCATATTGCACCGCGCTACCGCATCATGGCGGCAGCGGGGCGTGTTACGTCGCACTACGTAAAACGGCGCAGGCGAAGCAAGAAAACTGGGAGCGCCACGCTAAGCGCAGTCGTTGA", + "dna_sequence_length": 564, + "functions": [ + "DNA endonuclease" + ], + "id": "CDS_1327", + "location": [ + [ + "NC_000913", + 1405979, + "+", + 564 + ] + ], + "md5": "27ee045a61a9173ed9951f9e112d89ce", + "parent_gene": "", + "protein_md5": "050219775973303342f92cb9f00a4d17", + "protein_translation": "MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRKTAQAKQENWERHAKRSR", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004504" + ], + [ + "gene_synonym", + "ECK1338" + ], + [ + "gene_synonym", + "EcoGene:EG13355" + ], + [ + "gene_synonym", + "GI:90111253" + ], + [ + "gene_synonym", + "GeneID:945909" + ], + [ + "gene_synonym", + "JW5206" + ], + [ + "gene_synonym", + "NP_415857.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77302" + ], + [ + "gene_synonym", + "b1341" + ], + [ + "gene_synonym", + "ydaM" + ] + ], + "dna_sequence": "ATGATTACGCACAACTTCAATACCCTGGACTTACTCACCAGTCCTGTCTGGATCGTTTCGCCCTTTGAGGAACAGTTAATTTATGCCAATAGCGCGGCGAAACTGTTGATGCAAGACCTCACGTTTAGTCAGCTACGAACCGGACCCTATTCCGTCTCCTCACAAAAAGAACTGCCGAAATACCTCTCCGATCTGCAAAACCAACACGATATTATCGAAATCCTCACTGTTCAGCGTAAAGAAGAGGAAACAGCATTGAGCTGTCGGCTTGTTTTGCGAAAGCTGACAGAAACAGAACCGGTGATTATTTTCGAAGGTATCGAAGCGCCGGCAACGCTGGGTTTAAAAGCCAGTCGCTCGGCAAATTATCAGCGCAAAAAACAAGGTTTTTATGCGCGCTTTTTTCTGACTAACTCTGCACCAATGTTGTTGATTGACCCGTCACGAGATGGACAAATCGTCGATGCTAACCTCGCCGCGCTCAATTTCTATGGTTATAACCATGAAACGATGTGCCAGAAACATACCTGGGAAATAAATATGCTCGGGCGTCGCGTCATGCCTATCATGCATGAAATCTCGCATTTACCCGGTGGTCATAAACCTTTGAATTTTGTTCATAAACTGGCGGATGGTTCGACTCGTCATGTGCAGACCTATGCCGGACCGATTGAAATTTATGGCGACAAGCTCATGTTATGTATTGTGCATGATATTACTGAGCAAAAACGGCTGGAGGAGCAGCTGGAACATGCTGCTCACCATGACGCGATGACCGGATTACTGAATCGGCGACAGTTTTATCACATTACGGAACCAGGCCAAATGCAGCATCTCGCCATCGCTCAGGATTACAGCTTGTTGCTCATCGACACCGATCGTTTTAAACACATTAACGATCTCTATGGGCATTCTAAAGGTGATGAGGTGTTATGCGCCCTCGCCCGCACCCTCGAAAGTTGCGCTCGCAAAGGCGATTTGGTGTTTCGTTGGGGAGGCGAAGAGTTTGTCTTATTGCTACCAAGAACCCCACTGGATACCGCGCTTTCGCTGGCTGAAACTATCCGCGTAAGCGTGGCAAAAGTGAGTATTTCGGGCTTACCACGCTTTACCGTCAGCATTGGTGTGGCGCATCACGAAGGAAATGAAAGCATCGATGAACTGTTTAAACGCGTTGATGATGCTTTGTATCGGGCGAAAAATGATGGACGCAACCGCGTGCTGGCGGCATAA", + "dna_sequence_length": 1233, + "functions": [ + "diguanylate cyclase, csgD regulator" + ], + "id": "CDS_1328", + "location": [ + [ + "NC_000913", + 1407795, + "-", + 1233 + ] + ], + "md5": "efc68f66e3cdfb6fb4340b56e68f5c28", + "parent_gene": "", + "protein_md5": "4039408fba9d8e89f5375efc1ee5c25d", + "protein_translation": "MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAAKLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRKLTETEPVIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004508" + ], + [ + "gene_synonym", + "ECK1339" + ], + [ + "gene_synonym", + "EcoGene:EG13356" + ], + [ + "gene_synonym", + "GI:16129303" + ], + [ + "gene_synonym", + "GeneID:945910" + ], + [ + "gene_synonym", + "JW1336" + ], + [ + "gene_synonym", + "NP_415858.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64423" + ], + [ + "gene_synonym", + "b1342" + ], + [ + "gene_synonym", + "ydaN" + ], + [ + "gene_synonym", + "zntB" + ] + ], + "dna_sequence": "GTGGAAGCGATTAAGGGATCGGACGTTAATGTCCCGGATGCAGTATTTGCCTGGATGCTGGATGGTAGAGGCGGCGTTAAACCGCTGGAAAATACAGATGTGATTGATGAAGCGCATCCCTGTTGGCTCCACCTTAATTATGTACACCATGATAGCGCCCAATGGCTGGCGACAACACCGCTGCTTCCCAATAACGTACGTGATGCGCTGGCGGGCGAGAGCACGCGTCCCCGAGTCAGCCGTCTCGGTGAAGGCACGCTGATTACATTGCGCTGTATAAACGGCAGCACCGATGAACGCCCCGATCAACTGGTCGCCATGCGTGTATATATGGACGGGCGGTTAATTGTTTCGACCCGACAACGCAAAGTGCTGGCGCTGGACGATGTGGTGAGCGATCTGGAAGAGGGCACGGGTCCGACCGATTGCGGGGGATGGCTGGTGGATGTGTGCGATGCGTTGACCGATCATTCCAGTGAATTTATCGAGCAGCTGCACGATAAAATTATCGACCTTGAAGATAATCTCCTTGATCAGCAAATTCCACCGCGTGGATTCCTGGCTCTGCTGCGCAAACAATTAATTGTGATGCGTCGCTATATGGCACCGCAACGTGATGTTTATGCTCGTCTTGCCAGTGAACGTTTGCCGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCATCGTAGTAAATGGTTGTAA", + "dna_sequence_length": 984, + "functions": [ + "putative Zn(II) transporter" + ], + "id": "CDS_1329", + "location": [ + [ + "NC_000913", + 1408050, + "+", + 984 + ] + ], + "md5": "99c64c3898d297b5197d14363882b4f1", + "parent_gene": "", + "protein_md5": "60b10b9f797df5456b5e5950dc4fd589", + "protein_translation": "MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLHLNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPDQLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004511" + ], + [ + "gene_synonym", + "ECK1340" + ], + [ + "gene_synonym", + "EcoGene:EG10210" + ], + [ + "gene_synonym", + "GI:16129304" + ], + [ + "gene_synonym", + "GeneID:947153" + ], + [ + "gene_synonym", + "JW1337" + ], + [ + "gene_synonym", + "NP_415859.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21693" + ], + [ + "gene_synonym", + "b1343" + ], + [ + "gene_synonym", + "dbpA" + ], + [ + "gene_synonym", + "rhlC" + ] + ], + "dna_sequence": "GTGACCGCTTTTTCTACCCTGAATGTTTTGCCTCCCGCCCAACTCACGAACCTTAATGAGTTGGGTTATTTAACCATGACGCCGGTGCAGGCCGCCGCGCTTCCGGCGATCCTTGCCGGAAAAGATGTTCGCGTGCAGGCGAAAACCGGCAGCGGCAAAACGGCGGCTTTTGGCCTCGGCTTGTTACAGCAAATTGATGCGTCGCTATTTCAAACCCAGGCTTTAGTGCTGTGTCCTACGCGTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAGATGCTTTGCCACCCATTGAACAACAATTTTATGAGACATCCAGCAAAGGCAAAATTCCTCTGTTGCAACGGTTATTAAGCTTGCATCAGCCATCCTCTTGCGTGGTGTTTTGCAATACCAAAAAAGATTGCCAGGCTGTCTGCGACGCGCTGAATGAAGTAGGGCAAAGTGCATTGTCATTACACGGCGATTTGGAGCAACGCGATCGCGATCAGACCCTGGTACGTTTTGCTAACGGTAGCGCCCGTGTACTGGTCGCGACTGATGTTGCTGCGCGTGGTCTGGATATTAAATCGCTTGAGCTGGTGGTGAACTTTGAGCTGGCGTGGGACCCTGAAGTTCATGTACATCGCATCGGTCGTACAGCTCGTGCAGGAAATAGCGGTCTGGCGATCAGTTTCTGTGCTCCGGAAGAAGCACAGCGGGCCAATATCATTTCTGACATGTTGCAGATAAAACTTAACTGGCAAACGCCGCCAGCTAATAGTTCCATTGCGACGCTGGAAGCAGAAATGGCAACGTTGTGTATCGATGGCGGGAAAAAAGCCAAAATGCGCCCGGGTGATGTATTAGGTGCACTGACAGGAGATATCGGGCTTGATGGCGCAGATATTGGCAAAATCGCCGTGCATCCGGCGCATGTCTATGTCGCGGTCCGTCAGGCTGTTGCTCATAAAGCATGGAAACAGTTACAGGGCGGGAAGATTAAAGGAAAAACGTGCCGGGTGCGGTTATTAAAATAA", + "dna_sequence_length": 1374, + "functions": [ + "ATP-dependent RNA helicase, specific for 23S rRNA" + ], + "id": "CDS_1330", + "location": [ + [ + "NC_000913", + 1409511, + "+", + 1374 + ] + ], + "md5": "f2c5df0d9ad7958173a5313b20187a09", + "parent_gene": "", + "protein_md5": "40637bbe03deacc036d57aacf0a9f30a", + "protein_translation": "MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004514" + ], + [ + "gene_synonym", + "ECK1341" + ], + [ + "gene_synonym", + "EcoGene:EG13357" + ], + [ + "gene_synonym", + "GI:16129305" + ], + [ + "gene_synonym", + "GeneID:948967" + ], + [ + "gene_synonym", + "JW1338" + ], + [ + "gene_synonym", + "NP_415860.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76055" + ], + [ + "gene_synonym", + "b1344" + ], + [ + "gene_synonym", + "stcA" + ], + [ + "gene_synonym", + "ttcA" + ], + [ + "gene_synonym", + "ydaO" + ] + ], + "dna_sequence": "ATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCCAATCAATTTTTCGCTGGTGGCTGTTAACCTCGATCAAAAGCAACCGGGCTTCCCGGAACACGTTCTGCCCGAGTATCTTGAAAAGCTGGGCGTTGAGTACAAGATTGTTGAAGAGAATACTTACGGTATCGTGAAAGAGAAGATTCCAGAGGGCAAAACCACTTGCTCACTGTGTTCTCGCCTTCGTCGCGGTATCCTTTATCGTACCGCAACGGAACTGGGGGCGACGAAGATCGCGTTGGGTCACCATCGTGACGATATCCTGCAAACGTTGTTCTTAAATATGTTCTACGGCGGTAAGATGAAAGGTATGCCTCCGAAACTGATGAGCGATGATGGCAAACATATCGTTATTCGTCCGCTGGCCTACTGCCGCGAGAAAGATATTCAGCGATTTGCCGATGCAAAAGCGTTCCCGATTATTCCGTGCAACCTGTGCGGTTCACAGCCTAACCTGCAACGTCAGGTGATTGCTGACATGTTGCGTGACTGGGATAAACGTTATCCAGGGCGTATCGAGACGATGTTCAGCGCGATGCAGAATGTGGTGCCGTCGCATCTGTGCGATACCAACCTGTTCGATTTCAAAGGCATCACCCACGGTTCTGAAGTGGTTAACGGGGGTGATCTGGCGTTTGATCGCGAAGAGATCCCACTACAACCGGCGTGCTGGCAGCCAGAAGAAGATGAAAATCAGTTGGATGAGTTACGGCTGAATGTGGTTGAAGTGAAATAA", + "dna_sequence_length": 936, + "functions": [ + "tRNA s(2)C32 thioltransferase, iron sulfur cluster protein" + ], + "id": "CDS_1331", + "location": [ + [ + "NC_000913", + 1411948, + "-", + 936 + ] + ], + "md5": "d081200542ca3ce786660d719b698cc1", + "parent_gene": "", + "protein_md5": "c94ae86371a55838b6fc272f1ea97ba3", + "protein_translation": "MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPACWQPEEDENQLDELRLNVVEVK", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004517" + ], + [ + "gene_synonym", + "ECK1342" + ], + [ + "gene_synonym", + "EcoGene:EG13358" + ], + [ + "gene_synonym", + "GI:16129306" + ], + [ + "gene_synonym", + "GeneID:946976" + ], + [ + "gene_synonym", + "JW1339" + ], + [ + "gene_synonym", + "NP_415861.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76056" + ], + [ + "gene_synonym", + "b1345" + ], + [ + "gene_synonym", + "intR" + ], + [ + "gene_synonym", + "ydaP" + ] + ], + "dna_sequence": "ATGTCTAAATTACCAACAGGTGTCGAGATTAGAGGTAGATACATTCGCATCTGGTTCATGTTTCGAGGAAAACGATGTCGGGAAACATTAAAAGGCTGGGAGATTACAAACAGTAATATTAAAAAGGCCGGAAATTTAAGAGCGCTGATAGTTCATGAAATAAACTCCGGTGAATTTGAGTATTTAAGACGTTTTCCCCAGTCCAGCACTGGGGCAAAAATGGTGACAACGAGAGTCATAAAAACGTTCGGAGAGCTTTGTGATATCTGGACAAAAATTAAAGAGACAGAGTTAACAACAAACACAATGAAGAAAACGAAATCACAATTAAAAACACTCAGAATAATAATTTGTGAAAGTACCCCGATATCACATATTCGTTATAGCGATATCTTAAACTACCGGAATGAACTGCTGCATGGAGAAACGCTTTACCTGGATAATCCAAGATCCAACAAAAAAGGAAGAACCGTGCGCACAGTTGATAACTATATCGCCCTGCTCTGTTCGCTGTTGCGTTTTGCGTATCAGTCGGGATTTATATCAACCAAACCATTTGAAGGAGTAAAAAAATTACAGCGAAACAGAATAAAGCCTGATCCGTTATCTAAAACAGAATTCAATGCATTAATGGAAAGTGAAAAAGGACAGAGCCAGAACTTGTGGAAATTTGCCGTTTACTCAGGACTTCGTCACGGGGAACTGGCAGCTCTGGCGTGGGAGGATGTGGATCTCGAAAAGGGAATAGTGAATGTCAGAAGAAACCTGACGATACTTGATATGTTCGGTCCCCCAAAAACAAATGCCGGGATCCGAACAGTAACACTACTGCAGCCTGCTCTTGAAGCACTGAAGGAGCAATACAAACTGACCGGGCATCATCGCAAAAGCGAAATCACCTTTTATCATCGGGAGTACGGCAGAACCGAAAAGCAAAAACTGCATTTTGTTTTCATGCCCAGGGTGTGTAACGGAAAACAAAAACCTTATTACTCGGTAAGCAGTTTGGGGGCAAGGTGGAATGCAGCAGTAAAACGTGCTGGTATTCGCCGCCGTAATCCGTACCATACGCGGCATACTTTTGCCTGCTGGCTGTTGACGGCAGGAGCGAACCCGGCATTTATAGCCAGCCAAATGGGGCATGAAACTGCGCAGATGGTGTATGAAATTTACGGTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAG", + "dna_sequence_length": 1236, + "functions": [ + "Rac prophage", + "integrase" + ], + "id": "CDS_1332", + "location": [ + [ + "NC_000913", + 1413235, + "-", + 1236 + ] + ], + "md5": "8e8d88f2b7c166b7b59b1c2e1bda179c", + "parent_gene": "", + "protein_md5": "354e1180e2146e967206b82194b212d1", + "protein_translation": "MSKLPTGVEIRGRYIRIWFMFRGKRCRETLKGWEITNSNIKKAGNLRALIVHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQIAMLNARLS", + "protein_translation_length": 411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004519" + ], + [ + "gene_synonym", + "ECK1343" + ], + [ + "gene_synonym", + "EcoGene:EG13359" + ], + [ + "gene_synonym", + "GI:90111254" + ], + [ + "gene_synonym", + "GeneID:947399" + ], + [ + "gene_synonym", + "JW5207" + ], + [ + "gene_synonym", + "NP_415862.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76057" + ], + [ + "gene_synonym", + "b1346" + ], + [ + "gene_synonym", + "ydaQ" + ] + ], + "dna_sequence": "ATGGCACAAGTAATCTTTAATGAAGAGTGGATGGTTGAATACGGCCTGATGCTTCGCACTGGTCTGGGGGCCAGACAAATTGAAGCATACCGCCAGAACTGTTGGGTGGAGGGCTTCCACTTCAAACGAGTATCTCCTTTAGGTAAGCCAGACAGCAAACGAGGGATTATCTGGTACAACTATCCAAAGATAAATCAGTTTATCAAAGACTCATGA", + "dna_sequence_length": 216, + "functions": [ + "Rac prophage", + "conserved protein" + ], + "id": "CDS_1333", + "location": [ + [ + "NC_000913", + 1413452, + "-", + 216 + ] + ], + "md5": "2cc7e1704775fb9ce5354e268e2405cd", + "parent_gene": "", + "protein_md5": "c74ef7009315a1d8e1f7a1bfe045d258", + "protein_translation": "MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004522" + ], + [ + "gene_synonym", + "ECK1344" + ], + [ + "gene_synonym", + "EcoGene:EG11901" + ], + [ + "gene_synonym", + "GI:16129308" + ], + [ + "gene_synonym", + "GeneID:947504" + ], + [ + "gene_synonym", + "JW1341" + ], + [ + "gene_synonym", + "NP_415863.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33230" + ], + [ + "gene_synonym", + "b1347" + ], + [ + "gene_synonym", + "rcbA" + ], + [ + "gene_synonym", + "ydaC" + ] + ], + "dna_sequence": "ATGTATAAAATTACCGCCACTATTGAAAAGGAAGGTGGCACTCCTACTAACTGGACAAGATATTCAAAATCTAAACTAACGAAATCAGAATGCGAAAAAATGCTCTCAGGTAAAAAAGAAGCAGGCGTTTCCAGAGAGCAGAAAGTAAAACTGATAAATTTTAATTGCGAGAAACTTCAGTCCTCGAGAATTGCATTGTATTCAAATTAA", + "dna_sequence_length": 210, + "functions": [ + "DUF1187 family protein, Rac prophage", + "putative double-strand break reduction protein" + ], + "id": "CDS_1334", + "location": [ + [ + "NC_000913", + 1413740, + "-", + 210 + ] + ], + "md5": "eed159ed2f1997b5b28a517fa387e7b3", + "parent_gene": "", + "protein_md5": "415ee6b0118dd8fe5eae1c9238df588f", + "protein_translation": "MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004524" + ], + [ + "gene_synonym", + "ECK1345" + ], + [ + "gene_synonym", + "EcoGene:EG11900" + ], + [ + "gene_synonym", + "GI:16129309" + ], + [ + "gene_synonym", + "GeneID:945914" + ], + [ + "gene_synonym", + "JW5208" + ], + [ + "gene_synonym", + "NP_415864.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33229" + ], + [ + "gene_synonym", + "b1348" + ], + [ + "gene_synonym", + "lar" + ], + [ + "gene_synonym", + "ral" + ], + [ + "gene_synonym", + "ralR" + ], + [ + "gene_synonym", + "ydaB" + ] + ], + "dna_sequence": "ATGAGATATGACAATGTTAAACCATGTCCATTTTGTGGTTGTCCATCAGTAACGGTGAAAGCCATTTCAGGATATTACCGAGCGAAGTGTAACGGATGCGAATCCCGAACCGGTTATGGTGGAAGTGAAAAAGAAGCACTCGAAAGATGGAATAAACGAACCACTGGAAATAATAATGGAGGTGTTCATGTATAA", + "dna_sequence_length": 195, + "functions": [ + "Rac prophage", + "restriction alleviation protein" + ], + "id": "CDS_1335", + "location": [ + [ + "NC_000913", + 1413927, + "-", + 195 + ] + ], + "md5": "9a93e6c88ac8857bf24d47afd27b2a05", + "parent_gene": "", + "protein_md5": "8c74262c9ecc9135d3835e591c5354d5", + "protein_translation": "MRYDNVKPCPFCGCPSVTVKAISGYYRAKCNGCESRTGYGGSEKEALERWNKRTTGNNNGGVHV", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004529" + ], + [ + "gene_synonym", + "ECK1346" + ], + [ + "gene_synonym", + "EcoGene:EG11899" + ], + [ + "gene_synonym", + "GI:16129310" + ], + [ + "gene_synonym", + "GeneID:945917" + ], + [ + "gene_synonym", + "JW1343" + ], + [ + "gene_synonym", + "NP_415865.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33228" + ], + [ + "gene_synonym", + "b1349" + ], + [ + "gene_synonym", + "recT" + ] + ], + "dna_sequence": "ATGACTAAGCAACCACCAATCGCAAAAGCCGATCTGCAAAAAACTCAGGGAAACCGTGCACCAGCAGCAGTTAAAAATAGCGACGTGATTAGTTTTATTAACCAGCCATCAATGAAAGAGCAACTGGCAGCAGCTCTTCCACGCCATATGACGGCTGAACGTATGATCCGTATCGCCACCACAGAAATTCGTAAAGTTCCGGCGTTAGGAAACTGTGACACTATGAGTTTTGTCAGTGCGATCGTACAGTGTTCACAGCTCGGACTTGAGCCAGGTAGCGCCCTCGGTCATGCATATTTACTGCCTTTTGGTAATAAAAACGAAAAGAGCGGTAAAAAGAACGTTCAGCTAATCATTGGCTATCGCGGCATGATTGATCTGGCTCGCCGTTCTGGTCAAATCGCCAGCCTGTCAGCCCGTGTTGTCCGTGAAGGTGACGAGTTTAGCTTCGAATTTGGCCTTGATGAAAAGTTAATACACCGCCCGGGAGAAAACGAAGATGCCCCGGTTACCCACGTCTATGCTGTCGCAAGACTGAAAGACGGAGGTACTCAGTTTGAAGTTATGACGCGCAAACAGATTGAGCTGGTGCGCAGCCTGAGTAAAGCTGGTAATAACGGGCCGTGGGTAACTCACTGGGAAGAAATGGCAAAGAAAACGGCTATTCGTCGCCTGTTCAAATATTTGCCCGTATCAATTGAGATCCAGCGTGCAGTATCAATGGATGAAAAGGAACCACTGACAATCGATCCTGCAGATTCCTCTGTATTAACCGGGGAATACAGTGTAATCGATAATTCAGAGGAATAA", + "dna_sequence_length": 810, + "functions": [ + "Rac prophage", + "recombination and repair protein" + ], + "id": "CDS_1336", + "location": [ + [ + "NC_000913", + 1414793, + "-", + 810 + ] + ], + "md5": "470ecb15bc0d9d5124b75fa94dc6ed0a", + "parent_gene": "", + "protein_md5": "0e3806be9fca91c6b4790d9dbd9ca089", + "protein_translation": "MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004531" + ], + [ + "gene_synonym", + "ECK1347" + ], + [ + "gene_synonym", + "EcoGene:EG10827" + ], + [ + "gene_synonym", + "GI:16129311" + ], + [ + "gene_synonym", + "GeneID:945918" + ], + [ + "gene_synonym", + "JW1344" + ], + [ + "gene_synonym", + "NP_415866.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15032" + ], + [ + "gene_synonym", + "b1350" + ], + [ + "gene_synonym", + "recE" + ], + [ + "gene_synonym", + "rmuB" + ], + [ + "gene_synonym", + "sbcA" + ] + ], + "dna_sequence": "ATGAGCACAAAACCACTCTTCCTGTTACGGAAAGCGAAAAAATCATCCGGTGAACCTGACGTCGTCCTGTGGGCAAGCAACGATTTTGAATCGACCTGTGCCACTCTGGACTACCTGATCGTTAAGTCAGGTAAAAAACTGAGCAGCTATTTTAAAGCTGTTGCCACGAATTTTCCTGTCGTTAATGACCTGCCCGCTGAAGGTGAGATCGATTTTACCTGGAGTGAACGCTATCAACTCAGCAAAGACTCCATGACATGGGAACTAAAACCGGGAGCAGCACCAGACAACGCTCACTATCAAGGCAATACCAACGTCAACGGCGAAGACATGACTGAGATTGAGGAGAATATGCTACTCCCAATTTCTGGCCAGGAACTGCCCATTCGTTGGCTTGCTCAACACGGCAGCGAAAAACCGGTAACGCACGTTTCACGCGACGGACTCCAGGCATTACACATTGCTCGGGCTGAAGAACTACCGGCTGTTACTGCCCTGGCTGTTTCCCACAAAACCAGCCTGCTCGACCCGCTGGAAATTCGCGAACTCCACAAACTGGTTCGTGACACTGACAAAGTTTTCCCTAATCCTGGTAATTCAAACCTGGGACTGATAACTGCTTTTTTCGAAGCATACCTGAACGCTGACTACACCGATCGAGGACTGCTGACAAAAGAGTGGATGAAGGGTAATCGTGTTTCACACATCACTCGCACGGCTTCCGGTGCTAATGCTGGCGGCGGAAACCTCACCGATCGCGGCGAAGGTTTCGTACACGATCTGACGTCACTGGCGCGCGACGTAGCCACTGGCGTACTGGCCCGTTCAATGGATCTGGACATCTATAACCTTCATCCGGCACACGCTAAACGCATTGAGGAAATTATCGCTGAAAATAAACCGCCCTTTTCTGTTTTCCGCGACAAATTCATCACCATGCCTGGCGGGCTGGATTATTCCCGCGCCATCGTGGTTGCGTCCGTAAAAGAAGCACCAATTGGGATCGAGGTCATCCCCGCGCACGTCACTGAATATCTGAACAAAGTACTGACTGAAACCGATCATGCCAACCCTGATCCGGAAATCGTGGATATTGCCTGCGGTCGCTCCTCTGCCCCGATGCCGCAGCGAGTAACAGAAGAAGGAAAACAGGATGATGAAGAAAAACCGCAACCATCTGGAACAACGGCAGTTGAACAGGGAGAGGCTGAAACAATGGAACCGGACGCAACTGAACATCATCAGGACACGCAGCCGCTGGATGCTCAGTCACAGGTAAATTCTGTTGATGCGAAATATCAGGAACTGCGGGCAGAACTCCATGAAGCCCGGAAAAACATTCCATCAAAAAATCCTGTCGATGACGATAAATTGCTTGCTGCATCACGTGGTGAATTTGTTGACGGAATTAGCGACCCGAACGATCCGAAATGGGTAAAGGGGATCCAGACTCGCGATTGTGTGTACCAGAACCAGCCAGAAACGGAAAAAACCAGCCCAGATATGAATCAACCTGAGCCAGTAGTGCAACAGGAACCGGAAATAGCCTGCAATGCCTGCGGCCAGACTGGCGGGGATAACTGCCCTGACTGTGGTGCGGTGATGGGCGACGCAACATACCAGGAAACATTCGATGAAGAGAGTCAGGTTGAAGCTAAGGAAAATGATCCGGAGGAAATGGAAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGACATAGAGCCAGGTATTTATTACGGAATTTCGAATGAGAATTACCACGCGGGTCCCGGTATCAGTAAGTCTCAGCTCGATGACATTGCTGATACTCCGGCACTATATTTGTGGCGTAAAAATGCCCCCGTGGACACCACAAAGACAAAAACGCTCGATTTAGGAACTGCTTTCCACTGCCGGGTACTTGAACCGGAAGAATTCAGTAACCGCTTTATCGTAGCACCTGAATTTAACCGCCGTACAAACGCCGGAAAAGAAGAAGAGAAAGCGTTTCTGATGGAATGCGCAAGCACAGGAAAAACGGTTATCACTGCGGAAGAAGGCCGGAAAATTGAACTCATGTATCAAAGCGTTATGGCTTTGCCGCTGGGGCAATGGCTTGTTGAAAGCGCCGGACACGCTGAATCATCAATTTACTGGGAAGATCCTGAAACAGGAATTTTGTGTCGGTGCCGTCCGGACAAAATTATCCCTGAATTTCACTGGATCATGGACGTGAAAACTACGGCGGATATTCAACGATTCAAAACCGCTTATTACGACTACCGCTATCACGTTCAGGATGCATTCTACAGTGACGGTTATGAAGCACAGTTTGGAGTGCAGCCAACTTTCGTTTTTCTGGTTGCCAGCACAACTATTGAATGCGGACGTTATCCGGTTGAAATTTTCATGATGGGCGAAGAAGCAAAACTGGCAGGTCAACAGGAATATCACCGCAATCTGCGAACCCTGTCTGACTGCCTGAATACCGATGAATGGCCAGCTATTAAGACATTATCACTGCCCCGCTGGGCTAAGGAATATGCAAATGACTAA", + "dna_sequence_length": 2601, + "functions": [ + "Rac prophage", + "exonuclease VIII, 5' to 3' specific dsDNA exonuclease" + ], + "id": "CDS_1337", + "location": [ + [ + "NC_000913", + 1417386, + "-", + 2601 + ] + ], + "md5": "cae79740ac461b653735be635530c7a4", + "parent_gene": "", + "protein_md5": "f8db06c0b3c62b8fc9f21efaad9dc610", + "protein_translation": "MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQGNTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSKNPVDDDKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYAND", + "protein_translation_length": 866, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004533" + ], + [ + "gene_synonym", + "ECK1348" + ], + [ + "gene_synonym", + "EcoGene:EG10813" + ], + [ + "gene_synonym", + "GI:16129312" + ], + [ + "gene_synonym", + "GeneID:945920" + ], + [ + "gene_synonym", + "JW1345" + ], + [ + "gene_synonym", + "NP_415867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15033" + ], + [ + "gene_synonym", + "b1351" + ], + [ + "gene_synonym", + "racC" + ], + [ + "gene_synonym", + "sbcA" + ] + ], + "dna_sequence": "ATGATTACCAATTATGAAGCCACTGTTGTAACTACCGATGACATTGTTCACGAGGTGAATCTGGAAGGAAAGCGCATTGGCTACGTAATTAAAACAGAAAATAAAGAAACCCCATTCACTGTGGTTGATATCGATGGTCCATCAGGCAACGTAAAAACACTTGATGAAGGTGTCAAAAAAATGTGCCTGGTGCATATCGGAAAGAATCTGCCCGCAGAAAAAAAAGCCGAATTTCTGGCAACTCTAATTGCAATGAAATTAAAAGGTGAAATCTGA", + "dna_sequence_length": 276, + "functions": [ + "Rac prophage", + "uncharacterized protein" + ], + "id": "CDS_1338", + "location": [ + [ + "NC_000913", + 1417763, + "-", + 276 + ] + ], + "md5": "b5ebcc1c6bfe2cf3f95f38675d6fff4f", + "parent_gene": "", + "protein_md5": "6e0e11932422f2f2b43861b42984b455", + "protein_translation": "MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285047" + ], + [ + "gene_synonym", + "ECK1349" + ], + [ + "gene_synonym", + "EcoGene:EG12156" + ], + [ + "gene_synonym", + "GI:94541109" + ], + [ + "gene_synonym", + "GeneID:948959" + ], + [ + "gene_synonym", + "JW1346" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38394" + ], + [ + "gene_synonym", + "YP_588451.1" + ], + [ + "gene_synonym", + "b4526" + ], + [ + "gene_synonym", + "ydaE" + ] + ], + "dna_sequence": "ATGACTAAGAAAATAAAATGTGCTTACCACCTTTGCAAAAAAGACGTTGAAGAAAGCAAAGCTATTGAAAGAATGCTTCACTTCATGCACGGGATTTTATCAAAAGACGAACCGAGAAAATATTGCAGTGAAGCTTGTGCCGAAAAAGACCAGATGGCACATGAACTTTAA", + "dna_sequence_length": 171, + "functions": [ + "conserved protein, Rac prophage" + ], + "id": "CDS_1339", + "location": [ + [ + "NC_000913", + 1418008, + "-", + 171 + ] + ], + "md5": "e168344f963a87294a42525b6b766e31", + "parent_gene": "", + "protein_md5": "82e50642389bda267bedf97589ca7487", + "protein_translation": "MTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL", + "protein_translation_length": 56, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004537" + ], + [ + "gene_synonym", + "ECK1350" + ], + [ + "gene_synonym", + "EcoGene:EG12155" + ], + [ + "gene_synonym", + "GI:90111255" + ], + [ + "gene_synonym", + "GeneID:945921" + ], + [ + "gene_synonym", + "JW1347" + ], + [ + "gene_synonym", + "NP_415869.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38393" + ], + [ + "gene_synonym", + "b1352" + ], + [ + "gene_synonym", + "kil" + ], + [ + "gene_synonym", + "kilR" + ], + [ + "gene_synonym", + "ydaD" + ] + ], + "dna_sequence": "ATGATTGCACATCACTTCGGAACTGATGAAATACCACGTCAGTGTGTGACTCCTGGCGATTATGTTCTTCATGAAGGCCGGACATATATTGCCTCGGCAAACAATATTAAAAAGCGAAAACTATATATTCGTAACCTGACCACAAAAACATTCATTACTGACCGCATGATTAAAGTCTTCCTCGGTCGTGATGGTTTACCTGTAAAGGCGGAGTCATGGTGA", + "dna_sequence_length": 222, + "functions": [ + "killing protein, Rac prophage", + "FtsZ inhibitor protein" + ], + "id": "CDS_1340", + "location": [ + [ + "NC_000913", + 1418229, + "-", + 222 + ] + ], + "md5": "20c352541f6f634a24f689c426fd4a10", + "parent_gene": "", + "protein_md5": "1aa43c0fc99fbb91e0addfd4a3984a23", + "protein_translation": "MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVFLGRDGLPVKAESW", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004540" + ], + [ + "gene_synonym", + "ECK1351" + ], + [ + "gene_synonym", + "EcoGene:EG12154" + ], + [ + "gene_synonym", + "GI:90111256" + ], + [ + "gene_synonym", + "GeneID:945913" + ], + [ + "gene_synonym", + "JW5209" + ], + [ + "gene_synonym", + "NP_415870.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38392" + ], + [ + "gene_synonym", + "b1353" + ], + [ + "gene_synonym", + "git" + ], + [ + "gene_synonym", + "sieB" + ] + ], + "dna_sequence": "ATGTTGGATGTATTTACTCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAG", + "dna_sequence_length": 489, + "functions": [ + "phage superinfection exclusion protein, Rac prophage" + ], + "id": "CDS_1341", + "location": [ + [ + "NC_000913", + 1418671, + "+", + 489 + ] + ], + "md5": "30894006c1068d1b1450de663b0fd743", + "parent_gene": "", + "protein_md5": "84246535c9140de817d6e94d026b2732", + "protein_translation": "MLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285048" + ], + [ + "gene_synonym", + "ECK1352" + ], + [ + "gene_synonym", + "EcoGene:EG12157" + ], + [ + "gene_synonym", + "GI:94541091" + ], + [ + "gene_synonym", + "GeneID:945911" + ], + [ + "gene_synonym", + "JW1349" + ], + [ + "gene_synonym", + "NP_415872.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACW0" + ], + [ + "gene_synonym", + "b4527" + ], + [ + "gene_synonym", + "ydaF" + ] + ], + "dna_sequence": "ATGCAAAAAATCGACCTCGGCAACAACGAATCCCTGGTGTGCGGCGTGTTCCCCAACCAGGATGGAACGTTCACTGCCATGACGTATACCAAAAGCAAAACATTTAAAACCGAAACTGGTGCGCGCCGATGGTTGGAGAAGCACACAGTAAGCTAA", + "dna_sequence_length": 156, + "functions": [ + "uncharacterized protein, Rac prophage" + ], + "id": "CDS_1342", + "location": [ + [ + "NC_000913", + 1419311, + "-", + 156 + ] + ], + "md5": "e611cb53ef4267ccafb9d7633ac787f0", + "parent_gene": "", + "protein_md5": "fa243047619d08779918c7e851d3b226", + "protein_translation": "MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004544" + ], + [ + "gene_synonym", + "ECK1353" + ], + [ + "gene_synonym", + "EcoGene:EG12174" + ], + [ + "gene_synonym", + "GI:90111257" + ], + [ + "gene_synonym", + "GeneID:945907" + ], + [ + "gene_synonym", + "JW5210" + ], + [ + "gene_synonym", + "NP_415873.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76061" + ], + [ + "gene_synonym", + "b1355" + ], + [ + "gene_synonym", + "gatA" + ], + [ + "gene_synonym", + "ydaG" + ] + ], + "dna_sequence": "ATGGTGCATTACGAAGTAGTTCAGTATTTGATGGATTGTTGCGGTATCACTTACAACCAGGCTGTGCAGGCTTTACGCAGCAACGACTGGGATCTCTGGCAGGCAGAAGTCGCTATACGTAGCAACAAGATGTGA", + "dna_sequence_length": 135, + "functions": [ + "Rac prophage", + "uncharacterized protein" + ], + "id": "CDS_1343", + "location": [ + [ + "NC_000913", + 1419456, + "-", + 135 + ] + ], + "md5": "7a339db08e299ca940a427b377daa72c", + "parent_gene": "", + "protein_md5": "df3f15b3f86bda18bdc66fe91a77dbb9", + "protein_translation": "MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM", + "protein_translation_length": 44, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004548" + ], + [ + "gene_synonym", + "ECK1354" + ], + [ + "gene_synonym", + "EcoGene:EG13360" + ], + [ + "gene_synonym", + "GI:16129317" + ], + [ + "gene_synonym", + "GeneID:945899" + ], + [ + "gene_synonym", + "JW1351" + ], + [ + "gene_synonym", + "NP_415874.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76062" + ], + [ + "gene_synonym", + "b1356" + ], + [ + "gene_synonym", + "cohR" + ], + [ + "gene_synonym", + "racR" + ], + [ + "gene_synonym", + "ydaR" + ] + ], + "dna_sequence": "ATGCTTAGTGGTAAAGACTTAGGCCGAGCGATAGAGCAGGCCATTAACAAAAAAATCGCATCGGGATCCGTCAAATCAAAGGCGGAGGTCGCACGCCACTTTAAAGTCCAACCACCATCAATTTATGACTGGATTAAGAAAGGCTCTATAAGTAAAGATAAACTTCCAGAATTATGGCGTTTCTTTTCTGATGTTGTTGGTCCAGAGCATTGGGGGCTTAACGAATACCCCATACCAACCCCCACCAATTCAGATACAAAAAGTGAACTTTTAGATATAAACAACCTTTATCAAGCAGCCTCTGATGAAATAAGAGCGATTGTAGCTTTCCTGTTATCTGGAAATGCTACAGAACCAGATTGGGTTGACCACGATGTTCGCGCCTACATAGCAGCGATGGAAATGAAAGTGGGTAAGTATCTGAAAGCTCTTGAATCTGAACGGAAAAGCCAGAACATCACAAAAACTGGAACTTAA", + "dna_sequence_length": 477, + "functions": [ + "Rac prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1344", + "location": [ + [ + "NC_000913", + 1420241, + "-", + 477 + ] + ], + "md5": "82ad9fd66eb63eafc7bcbb0c1b5f10bb", + "parent_gene": "", + "protein_md5": "92d0df0ae1aa1d10ccfa8e76f28a9d51", + "protein_translation": "MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASDEIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004552" + ], + [ + "gene_synonym", + "ECK1355" + ], + [ + "gene_synonym", + "EcoGene:EG13361" + ], + [ + "gene_synonym", + "GI:16129318" + ], + [ + "gene_synonym", + "GeneID:945923" + ], + [ + "gene_synonym", + "JW1352" + ], + [ + "gene_synonym", + "NP_415875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76063" + ], + [ + "gene_synonym", + "b1357" + ], + [ + "gene_synonym", + "ydaS" + ] + ], + "dna_sequence": "ATGAAAAAAGAGAACTATTCATTCAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAACAAATCCTCATTTGATCATACCTGA", + "dna_sequence_length": 297, + "functions": [ + "Rac prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1345", + "location": [ + [ + "NC_000913", + 1420365, + "+", + 297 + ] + ], + "md5": "27dcfdaa916378ca5237acf148ffad65", + "parent_gene": "", + "protein_md5": "8eed53c8878ed84838a534d5253958c8", + "protein_translation": "MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004556" + ], + [ + "gene_synonym", + "ECK1356" + ], + [ + "gene_synonym", + "EcoGene:EG13362" + ], + [ + "gene_synonym", + "GI:16129319" + ], + [ + "gene_synonym", + "GeneID:945924" + ], + [ + "gene_synonym", + "JW1353" + ], + [ + "gene_synonym", + "NP_415876.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76064" + ], + [ + "gene_synonym", + "b1358" + ], + [ + "gene_synonym", + "ydaT" + ] + ], + "dna_sequence": "ATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGATACCCTGGAACGCCGTGCATTACTGGCGGCGCAGGAAGCGTTAAGTACGGCAATTGATGCGCATGATGATGCAGTCCAAGCCGTTTACCGGAAAGCGCATTTCAGCGGCGGCGGTTCTTCCGACGATTCTGTCATTGTTCATTAA", + "dna_sequence_length": 423, + "functions": [ + "Rac prophage", + "uncharacterized protein" + ], + "id": "CDS_1346", + "location": [ + [ + "NC_000913", + 1420684, + "+", + 423 + ] + ], + "md5": "5abdff1a0a2ed38cd466cc52547553a1", + "parent_gene": "", + "protein_md5": "3519a1b6dbed747a611460949596a072", + "protein_translation": "MKIKHEHIESVLFALAAEKGQAWVANAITEEYLRQGGGELPLVPGKDWNNQQNIYHRWLKGETKTQREKIQKLIPAILAILPRELRHRLCIFDTLERRALLAAQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVIVH", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004558" + ], + [ + "gene_synonym", + "ECK1357" + ], + [ + "gene_synonym", + "EcoGene:EG13363" + ], + [ + "gene_synonym", + "GI:16129320" + ], + [ + "gene_synonym", + "GeneID:945925" + ], + [ + "gene_synonym", + "JW1354" + ], + [ + "gene_synonym", + "NP_415877.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76065" + ], + [ + "gene_synonym", + "b1359" + ], + [ + "gene_synonym", + "ydaU" + ] + ], + "dna_sequence": "ATGCTGTTTGTGCTTATTCTAAGCCACCGGGCAGCATCATACGGGGCAATTATGGCCGCATTACCATACATGCAACTGTACATAGCTGATTACCTGGCTGACACCATGCATTTGTCAGCAGAGGAGCATGGTGCGTATTTGTTGCTGATGTTCAATTACTGGCAAACAGGAAAGCCAATACCTAAAAACAGGCTGGCAAAAATTGCCCGTCTGACTAACGAGCGATGGGCTGATGTTGAACCATCCTTGCAGGAGTTTTTTTGCGATAACGGCGAGGAATGGGTGCATCTTCGGATTGAGGAAGATCTGGCATCAGTCAGGGAAAAATTAACCAAAAAATCAGCCGCAGGAAAAGCATCTGTTCAGGCCAGAAGAAGCAGAAAGGAAGCAGATGTTCAAACAAAACAAGAGAGAAATTTAACAGGTGTTCAAACAGATGTTGAAGTGGTGTTTGAACATGATGTCAACACAAAGGCAACTAATAAAGATACAGATAAAGATCTAAAAACAGATCCCCCCCTAAATCCCCCCCGGGGGAATCGAGGTGTCAAAAAGTTTGACCCTCTGGATATTACTTTGCCGAACTGGATTTCTGTCTCGCTTTGGCGTGAGTGGGTTGAATTTCGCCAGGCATTGCGAAAACCGATTCGAACGGAGCAGGGCGCTAACGGGGCGATACGGGAGCTGGAAAAATTCCGCCAGCAGGGTTTTTCACCTGAGCAGGTGATTCGACACAGCATCGCCAATGAATACCAGGGCTTGTTCGCGCCGAAAGGTGTTCGACCTGAGACGTTACTCCGACAGGTTAACACCGTCTCGTTACCGGATAGTGCGATCCCGCCAGGCTTCAGGGGGTAA", + "dna_sequence_length": 858, + "functions": [ + "Rac prophage", + "conserved protein" + ], + "id": "CDS_1347", + "location": [ + [ + "NC_000913", + 1421119, + "+", + 858 + ] + ], + "md5": "9a963829058e2cfb7e56bfda41580e92", + "parent_gene": "", + "protein_md5": "26de0d37c25ab6364726fb8533836f2f", + "protein_translation": "MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004560" + ], + [ + "gene_synonym", + "ECK1358" + ], + [ + "gene_synonym", + "EcoGene:EG13364" + ], + [ + "gene_synonym", + "GI:16129321" + ], + [ + "gene_synonym", + "GeneID:945926" + ], + [ + "gene_synonym", + "JW1355" + ], + [ + "gene_synonym", + "NP_415878.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77546" + ], + [ + "gene_synonym", + "b1360" + ], + [ + "gene_synonym", + "ydaV" + ] + ], + "dna_sequence": "ATGAAAAATATTGCGACAGGCGATGTTCTTGAACGTATCCGCAGACTGGCCCCGTCACATGTAACCGCGCCATTCAAGACGGTAGCGGAGTGGCGCGAGTGGCAACTTTCCGAAGGCCAGAAACGTTGTGAGGAGATCAACCGTCAGAATCGTCAGTTGCGGGTGGAAAAAATTCTGAATCGCTCTGGCATCCAGCCATTGCACCGCAAATGCTCGTTTTCGAATTACCAGGTGCAGAACGAAGGGCAGCGATACGCGTTGAGTCAGGCGAAATCCATCGCTGATGAACTGATGACCGGGTGTACAAATTTTGCGTTCAGCGGAAAACCTGGTACCGGGAAGAACCACTTAGCGGCAGCTATCGGGAATCGCCTGCTGAAAGACGGTCAGACAGTGATTGTGGTTACCGTGGCTGATGTTATGAGTGCCCTGCACGCCAGCTATGACGATGGGCAGTCAGGCGAAAAATTTTTGCGGGAACTGTGCGAAGTGGATCTGCTGGTTCTTGATGAAATTGGCATTCAGCGCGAGACGAAAAACGAGCAGGTGGTACTGCACCAGATTGTTGATCGCCGGACAGCGTCGATGCGCAGCGTGGGGATGCTGACAAACCTGAACTATGAGGCCATGAAAACATTGCTCGGCGAGCGGATTATGGATCGCATGACCATGAACGGCGGGCGATGGGTGAATTTTAACTGGGAGAGCTGGCGTCCGAATGTCGTCCAGCCAGGAATTGCGAAGTAA", + "dna_sequence_length": 747, + "functions": [ + "Rac prophage", + "putative DNA replication protein" + ], + "id": "CDS_1348", + "location": [ + [ + "NC_000913", + 1421983, + "+", + 747 + ] + ], + "md5": "628b8682cdec6973dea98f81773b58b5", + "parent_gene": "", + "protein_md5": "aad01faa275e7a05ce258d1b495bf7d7", + "protein_translation": "MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVVQPGIAK", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004562" + ], + [ + "gene_synonym", + "ECK1359" + ], + [ + "gene_synonym", + "EcoGene:EG13365" + ], + [ + "gene_synonym", + "GeneID:945927" + ], + [ + "gene_synonym", + "JW5211" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76066" + ], + [ + "gene_synonym", + "b1361" + ], + [ + "gene_synonym", + "ydaW" + ] + ], + "dna_sequence": "ATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCTGATGAGCTGGCTACATTGTTTGGTACCACATCACGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGGTCGTCTGATTCGCGTAAATCAGGGCGGTAAATTTCGTTACTGCATACCGGGCGATAATTTACCAGCAGAGCCGAAAGCAGCATCGGT", + "dna_sequence_length": 500, + "id": "CDS_1349", + "location": [ + [ + "NC_000913", + 1422701, + "+", + 500 + ] + ], + "md5": "1e7b2b2bf4faaaf5f83af543e732a859", + "parent_gene": "", + "protein_md5": "2132ca70ea5900a9a5d80fe8b774da89", + "protein_translation": "MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAAS", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004564" + ], + [ + "gene_synonym", + "ECK1360" + ], + [ + "gene_synonym", + "EcoGene:EG13366" + ], + [ + "gene_synonym", + "GeneID:945928" + ], + [ + "gene_synonym", + "JW5212" + ], + [ + "gene_synonym", + "Rz" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77551" + ], + [ + "gene_synonym", + "b1362" + ], + [ + "gene_synonym", + "rzpR" + ], + [ + "gene_synonym", + "ydaX" + ] + ], + "dna_sequence": "ATCTCCGCTCTGGTTATCTGCATCGTCGTCTGCCTGTCATGGGGTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAACAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGAGATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCCGGGAACGACTGGTAATGATGCAGGCCCAACTTGAAGGTGCTCAGCAATACATAACCGAGCAGTGTTTAAAGTAA", + "dna_sequence_length": 444, + "id": "CDS_1350", + "location": [ + [ + "NC_000913", + 1423201, + "+", + 444 + ] + ], + "md5": "d2b18617eb6bd20859a5f34f240edf0e", + "parent_gene": "", + "protein_md5": "047e5b68926f5ed0eb0bb88b3a82a784", + "protein_translation": "ISALVICIVVCLSWGVNHYRDNAIAYKEQRDKNARELKLANAAITEMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLVMMQAQLEGAQQYITEQCLK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285049" + ], + [ + "gene_synonym", + "ECK1361" + ], + [ + "gene_synonym", + "EcoGene:EG14381" + ], + [ + "gene_synonym", + "GI:94541110" + ], + [ + "gene_synonym", + "GeneID:1450262" + ], + [ + "gene_synonym", + "JW5213" + ], + [ + "gene_synonym", + "Rz1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58042" + ], + [ + "gene_synonym", + "YP_588452.1" + ], + [ + "gene_synonym", + "b4528" + ], + [ + "gene_synonym", + "rzoR" + ] + ], + "dna_sequence": "ATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCCGGGAACGACTGGTAA", + "dna_sequence_length": 186, + "functions": [ + "Rac prophage", + "putative lipoprotein" + ], + "id": "CDS_1351", + "location": [ + [ + "NC_000913", + 1423400, + "+", + 186 + ] + ], + "md5": "56555959036e41302e7e2daa2db0c382", + "parent_gene": "", + "protein_md5": "488475db8db7a0f06e71dd627ad1b189", + "protein_translation": "MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPPDWQTPLNGIISPSGNDW", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004567" + ], + [ + "gene_synonym", + "ECK1362" + ], + [ + "gene_synonym", + "EcoGene:EG11020" + ], + [ + "gene_synonym", + "GI:16129324" + ], + [ + "gene_synonym", + "GeneID:945932" + ], + [ + "gene_synonym", + "JW1358" + ], + [ + "gene_synonym", + "NP_415881.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23849" + ], + [ + "gene_synonym", + "b1363" + ], + [ + "gene_synonym", + "trkG" + ] + ], + "dna_sequence": "ATGAATACATCTCATGTAAGAGTTGTTACTCATATGTGTGGGTTCCTGGTTTGGCTCTATAGTCTTTCAATGTTGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATATTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCCGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGTTTCTGGAATAACAACAACAGGAGCAACTGTAATTGATGATGTTAGTTCATTACCTCGGGCATATTTGTACTATCGGTCACAGTTAAATTTTATAGGTGGTTTAGGAGTTATTGTTCTGGCGGTTGCTGTATTGCCATTATTGGGTATTGGTGGTGCAAAGCTTTATCAGTCAGAAATGCCGGGGCCATTTAAGGATGACAAACTCACTCCCCGCCTGGCCGATACGTCACGGACACTGTGGATAACTTATTCTTTATTAGGTATTGCTTGTATTGTCTGTTATAGACTTGCAGGAATGCCTTTGTTTGATGCTATTTGTCACGGGATTTCCACAGTTTCGCTTGGTGGTTTCTCAACTCATAGCGAGAGTATCGGATATTTTAATAACTATTTGGTTGAGCTGGTGGCTGGTTCTTTTTCCCTGCTATCGGCTTTCAACTTCACTCTTTGGTATATTGTTATTAGCAGGAAAACGATAAAACCTTTAATCAGAGATATTGAACTTCGTTTCTTTCTGTTAATAGCCTTAGGGGTGATCATTGTTACCTCTTTCCAGGTCTGGCATATAGGTATGTATGACTTGCATGGAAGTTTTATTCATTCGTTTTTTCTTGCCAGCTCCATGCTCACTGATAATGGTTTAGCTACGCAGGATTATGCAAGTTGGCCCACGCACACGATAGTGTTTTTGCTGTTGTCAAGTTTCTTTGGGGGATGTATAGGTTCAACTTGTGGTGGAATTAAGTCACTTCGATTTCTTATACTTTTCAAACAAAGCAAACACGAGATAAATCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGATCGTGTAATGAGGTCTGTATGGAGTTTCTTTTTTCTTTATACTCTCTTCACGGTGTTTTTTATACTGGTGTTAAATGGTATGGGATATGATTTTCTTACATCATTTGCAACAGTGGCTGCATGTATTAATAATATGGGATTAGGTTTTGGGGCTACTGCATCGTCATTCGGAGTGCTTAATGACATTGCAAAATGCTTAATGTGCATAGCTATGATTCTTGGTCGCCTTGAAATTTATCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAA", + "dna_sequence_length": 1458, + "functions": [ + "Rac prophage", + "potassium transporter subunit" + ], + "id": "CDS_1352", + "location": [ + [ + "NC_000913", + 1423782, + "+", + 1458 + ] + ], + "md5": "dce8c5902f826994104d75fa0ee68f89", + "parent_gene": "", + "protein_md5": "b75489a56d800b5c4545e0a061c54090", + "protein_translation": "MNTSHVRVVTHMCGFLVWLYSLSMLPPMVVALFYKEKSLFVFFITFVIFFCIGGGAWYTTKKSGIQLRTRDGFIIIVMFWILFSVISAFPLWIDSELNLTFIDALFEGVSGITTTGATVIDDVSSLPRAYLYYRSQLNFIGGLGVIVLAVAVLPLLGIGGAKLYQSEMPGPFKDDKLTPRLADTSRTLWITYSLLGIACIVCYRLAGMPLFDAICHGISTVSLGGFSTHSESIGYFNNYLVELVAGSFSLLSAFNFTLWYIVISRKTIKPLIRDIELRFFLLIALGVIIVTSFQVWHIGMYDLHGSFIHSFFLASSMLTDNGLATQDYASWPTHTIVFLLLSSFFGGCIGSTCGGIKSLRFLILFKQSKHEINQLSHPRALLSVNVGGKIVTDRVMRSVWSFFFLYTLFTVFFILVLNGMGYDFLTSFATVAACINNMGLGFGATASSFGVLNDIAKCLMCIAMILGRLEIYPVIILFSGFFWRS", + "protein_translation_length": 485, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004571" + ], + [ + "gene_synonym", + "ECK1363" + ], + [ + "gene_synonym", + "EcoGene:EG14296" + ], + [ + "gene_synonym", + "GI:16129326" + ], + [ + "gene_synonym", + "GeneID:947417" + ], + [ + "gene_synonym", + "JW1359" + ], + [ + "gene_synonym", + "NP_415883.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76068" + ], + [ + "gene_synonym", + "b1365" + ], + [ + "gene_synonym", + "ynaK" + ] + ], + "dna_sequence": "ATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTCACGGTCGTGTTATGGCGGCTGAAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAA", + "dna_sequence_length": 264, + "functions": [ + "Rac prophage", + "conserved protein" + ], + "id": "CDS_1353", + "location": [ + [ + "NC_000913", + 1425377, + "+", + 264 + ] + ], + "md5": "06ddd573b3555d8309457378359208f2", + "parent_gene": "", + "protein_md5": "630d4fac5ca8ccb308e5d7908cfa01a1", + "protein_translation": "MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004574" + ], + [ + "gene_synonym", + "ECK1364" + ], + [ + "gene_synonym", + "EcoGene:EG13367" + ], + [ + "gene_synonym", + "GeneID:946208" + ], + [ + "gene_synonym", + "JW1360" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76069" + ], + [ + "gene_synonym", + "b1366" + ], + [ + "gene_synonym", + "ydaY" + ] + ], + "dna_sequence": "AGCAGCGATAACGATCAGTATCGCTCCCGTAATGCATTAATCCGTCGCCACATTGAGAAAATGGATGCCAGTTTGCACGTCGGAACGAAGGAGTTTGATATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAGGTTGCACTGGAATATACGGCAGAACGAGGGATCGCGCTGCTTAAGCAGAATCCAGAGTTGTACTGGCAGATCCTTGCAGAAGCAGCCAGCATCGCCCAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGGAACCAGAAATAG", + "dna_sequence_length": 453, + "id": "CDS_1354", + "location": [ + [ + "NC_000913", + 1425630, + "+", + 453 + ] + ], + "md5": "7a6a91f72a522b5ffe932216e166e983", + "parent_gene": "", + "protein_md5": "7dc7e36fb771b1485d7160071bff4315", + "protein_translation": "SSDNDQYRSRNALIRRHIEKMDASLHVGTKEFDISKVSEVDSVDDLLIDNAARYLLKDWKGVGELVNGVEVALEYTAERGIALLKQNPELYWQILAEAASIAQGKEQQKQDTIKKP", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004581" + ], + [ + "gene_synonym", + "ECK1365" + ], + [ + "gene_synonym", + "EcoGene:EG13369" + ], + [ + "gene_synonym", + "GeneID:947543" + ], + [ + "gene_synonym", + "JW1361" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77658" + ], + [ + "gene_synonym", + "b1368" + ], + [ + "gene_synonym", + "tmpR" + ], + [ + "gene_synonym", + "ynaA" + ] + ], + "dna_sequence": "ATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAGGCAACAGAAGATGAGAAGAACGCGCTCGCAAAATTAAAAGCAGCTATTGATCCAGTTGGTGCCGCAATTGATACTGTCGGTCGACGCTATTCTGAATTAAAGAAATTTTTCGATAAAGGGCTTATTGATAAAGAAGAATATGAATTTCTTGTCCGTAAACTTAATGAAACCACAGAGGAATTGAGCGGGGTTGCGCAAGCGCAGAGAGAAGCCGAGAAGGCCGGAAAACTTGCTGCCGCTCAGCAGGAAGCGCAGGCTCAGGCCTTTCAAAGAATGCTGGACAAGATCGACCCTCTGGCTGCGGCGCTAAGAAATCTTGAACAACAGCATGATGAACTTAATGCTGCGTTTGCATCCGGGAAAATAAATGGTTCTCAGTTTGAGAATTATAGCCGAAAAATACAGGAAACACGGCGAGAGCTTACCGGAGAGGCTCAGGCAGAGCGAGAAGCAGCAAAAGCGCATGATGAACAGGTTGTTGCTTTGCAACGTCTGATTGCTCAACTTGATCCTGTCGGAACTGCTTTTAATCGTCTGGTAGAACAACAGAAACAGCTCAATGAAGCAAAAGCTAAGGGGATGCTTTCTCCTGAAATGTATGAGGAGCTTTCTGGAAAACTTCGTGCTATGCGGAGTGAGCTTGAGGTTACTCAATCACAATTAAGCAAAACCGGAATGTCGGCAAAACAAACGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGC", + "dna_sequence_length": 933, + "id": "CDS_1355", + "location": [ + [ + "NC_000913", + 1426454, + "+", + 933 + ] + ], + "md5": "ed93f9016291f3f3dd1eaec249756acf", + "parent_gene": "", + "protein_md5": "b8337c6fa6716ab9bc3e4e1e57200d55", + "protein_translation": "MAEQTSRLAIIIDSTGAKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAIDTVGRRYSELKKFFDKGLIDKEEYEFLVRKLNETTEELSGVAQAQREAEKAGKLAAAQQEAQAQAFQRMLDKIDPLAAALRNLEQQHDELNAAFASGKINGSQFENYSRKIQETRRELTGEAQAEREAAKAHDEQVVALQRLIAQLDPVGTAFNRLVEQQKQLNEAKAKGMLSPEMYEELSGKLRAMRSELEVTQSQLSKTGMSAKQTAFAMRMLPAQMTDIVVGLSTGQSPFMVLMQQGG", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004583" + ], + [ + "gene_synonym", + "ASAP:ABE-0004590" + ], + [ + "gene_synonym", + "ASAP:ABE-0285103" + ], + [ + "gene_synonym", + "ECK1366" + ], + [ + "gene_synonym", + "EcoGene:EG14315" + ], + [ + "gene_synonym", + "GeneID:4056036" + ], + [ + "gene_synonym", + "JW5884" + ], + [ + "gene_synonym", + "JW5904" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77184" + ], + [ + "gene_synonym", + "b4570" + ], + [ + "gene_synonym", + "lomR" + ] + ], + "dna_sequence": "TTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTTACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGATTATCTCCGCGTAACTGACAACAAGAAGGGGAAAACGCACGACGTGCTGACCGGAAGTGATGACGGTCGCCACAGCAACACGTCTCTGGCGTGGGGAGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGA", + "dna_sequence_length": 399, + "id": "CDS_1356", + "location": [ + [ + "NC_000913", + 1427389, + "+", + 210 + ], + [ + "NC_000913", + 1428796, + "+", + 189 + ] + ], + "md5": "209cca5692d5e49fca91376e53eb6db1", + "parent_gene": "", + "protein_md5": "909fb23bd793c988cb3ae7f336c6a7ac", + "protein_translation": "FSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004586" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16129331" + ], + [ + "gene_synonym", + "GeneID:945944" + ], + [ + "gene_synonym", + "NP_415888.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE53" + ], + [ + "gene_synonym", + "b1370" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGAGCCATCAACTCACCTTCGCCGATAGTGAATTCAGCACTAAGCGCCGTCAGACCCGAAAAGAGATTTTCCTCTCCCGCATGGAGCAGATTCTGCCATGGCAGAATATGACCGCTGTCATCGAGCCGTTTTATCCCAAGGCGGGCAATGGCCGACGGCCCTATCCGCTGGAGACCATGCTGCGTATTCACTGCATGCAGCATTGGTACAACCTGAGCGACGGTGCCATGGAAGATGCCCTGTACGAAATCGCCTCCATGCGCCTGTTTGCCCGATTATCCCTGGATAGCGCCCTGCCGGATCGCACCACCATCATGAATTTCCGCCACCTGCTCGAGCAGCATCAACTGGCCCGTCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACCCAAGGCACTTTGGTGGATGCCACCATCATTGAGGCACCCAGCTCTACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTTCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGAGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGTCCCGGCAAGGTAAAAACCTTGAAGCAGAATCCGCGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGTGCCAGGGTGGAGCACCCGTTTCGCATCATCAAGCGGCAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGCTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACCCTGGCCAACCTGTTTCGGGTGGACCAAATGATACGTCAGTGGGAGAGATCTCAGTAA", + "dna_sequence_length": 981, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_1357", + "location": [ + [ + "NC_000913", + 1428726, + "-", + 981 + ] + ], + "md5": "6bd98c842a65152335c7a22b2e0db878", + "parent_gene": "", + "protein_md5": "ac8f69780f5e0ad9aa036da513f4d0fb", + "protein_translation": "MSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVKTLKQNPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004595" + ], + [ + "gene_synonym", + "ECK1367" + ], + [ + "gene_synonym", + "EcoGene:EG13370" + ], + [ + "gene_synonym", + "GI:90111261" + ], + [ + "gene_synonym", + "GeneID:945207" + ], + [ + "gene_synonym", + "JW1366" + ], + [ + "gene_synonym", + "NP_415890.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76072" + ], + [ + "gene_synonym", + "b1372" + ], + [ + "gene_synonym", + "stfR" + ], + [ + "gene_synonym", + "ynaB" + ] + ], + "dna_sequence": "ATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAACCCGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAGGATGATGCCCGTCCGGAGGCACTGCGCCGTTTTGAACTGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGCGGTGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGCTGCGGACTCAGCACGCGCAGCCAGCACGTCAGCCGGACAGGCCGCGTCGTCGGCTCAGTCAGCGTCTTCCAGCGCAGGAACGGCATCAACAAAGGCCACTGAAGCATCAAAAAGTGCTGCCGCTGCAGAGTCCTCAAAAAGCGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATGCTTCAGCGTCACTACAATCAGCAGCCACATCTGCATCCACCGCGACCACGAAGGCATCAGAAGCTGCGACCTCGGCCCGGGATGCGGCGGCCTCAAAAGAAGCGGCAAAATCATCAGAAACGAACGCATCATCAAGCGCCAGTAGTGCAGCTTCCTCGGCAACGGCGGCAGGAAATTCCGCGAAGGCGGCAAAAACGTCCGAGACGAACGCCAGGTCTTCTGAAACGGCAGCGGGACAGAGCGCCTCGGCTGCGGCAGGCTCAAAAACAGCGGCTGCGTCGTCTGCCAGTGCAGCGTCAACAAGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGGCGACCAGACAAGCGTCAGCAGCGAAGAGCAGCGCCACGACGGCATCCACGAAGGCGACAGAGGCTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAGCAGCTAAACGGGCAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGCAGAAAGACCAGAACGGCGCTGATATACCCGATAAGGGATGCTTCCTGAACAACATTAACGCGGTCAGTAAAACAGACTTTGCTGATAAGCGTGGTATGCGTTATGTGCGGGTTAACGCTCCTGCAGGTGCAACATCTGGAAAATATTACCCTGTTGTTGTTATGCGTTCTGCTGGCTCAGTAAGCGAACTGGCATCAAGAGTCATTATCACCACGGCAACGCGAACCGCAGGCGATCCGATGAATAACTGCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTCTATGTTGATGGCGCTGCTTTCCCTGTTTTTGCGTTTATTGAAGATGGCCTGTCAATATCCGCACCTGGTGCTGATCTCGTTGTTAATGATACGACCTATAAGTTTGGGGCAACAAATCCGGCGACTGAATGTATCGCGGCGGACGTTATCCTTGATTTTAAGAGTGGGCGTGGTTTTTATGAGTCTCATTCGTTAATCGTTAACGATAACTTGTCGTGCAAAAAACTTTTTGCCACAGACGAAATTGTAGCGCGTGGTGGTAATCAGATTCGAATGATAGGTGGGGAGTATGGTGCATTATGGCGTAATGATGGCGCTAAAACTTACCTGCTGCTTACCAATCAAGGTGATGTTTATGGTGGCTGGAATACATTAAGACCGTTTGCTATTGATAACGCAACCGGCGAACTGGTTATTGGAACCAAACTGTCCGCAAGTCTGAACGGTAATGCATTAACAGCAACAAAGCTGCAAACGCCAAGACGGGTTTCTGGTGTTGAGTTTGATGGTTCCAAAGATATTACTTTAACCGCCGCGCATGTGGCTGCTTTTGCCAGAAGGGCAACGGATACATATGCCGATGCGGATGGTGGCGTTCCATGGAATGCCGAATCTGGCGCTTACAATGTCACCCGCTCTGGCGACAGCTATATTCTGGTTAACTTCTATACCGGAGTCGGAAGTTGCCGGACCCTGCAGATGAAGGCGCATTACAGAAATGGTGGTCTGTTCTACCGTTCTTCAAGAGACGGTTATGGTTTTGAGGAAGACTGGGCAGAAGTTTATACCTCGAAAAATCTTCCACCAGAAAGCTACCCAGTCGGCGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGGCTTTTGACAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACGATTAAGGGCAAACCTGCCAGTGGTCGGGCCGTATTGTCTCAGGAACAGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAACTATATTGTGAGGCTTGCATAA", + "dna_sequence_length": 3363, + "functions": [ + "Rac prophage", + "putative tail fiber protein" + ], + "id": "CDS_1358", + "location": [ + [ + "NC_000913", + 1429049, + "+", + 3363 + ] + ], + "md5": "27961e47b20ca54f26559d7d69354892", + "parent_gene": "", + "protein_md5": "412e38a19b32c016350f8e9b06e14262", + "protein_translation": "MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNTASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA", + "protein_translation_length": 1120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004597" + ], + [ + "gene_synonym", + "ECK1368" + ], + [ + "gene_synonym", + "EcoGene:EG13371" + ], + [ + "gene_synonym", + "GI:16129334" + ], + [ + "gene_synonym", + "GeneID:946062" + ], + [ + "gene_synonym", + "JW1367" + ], + [ + "gene_synonym", + "NP_415891.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77163" + ], + [ + "gene_synonym", + "b1373" + ], + [ + "gene_synonym", + "tfaR" + ], + [ + "gene_synonym", + "ynaC" + ] + ], + "dna_sequence": "ATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGATGCATATATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCTTCCGGCAACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTATCGGGTATTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCCAGCACTGCCGTAG", + "dna_sequence_length": 576, + "functions": [ + "Rac prophage", + "putative tail fiber assembly protein" + ], + "id": "CDS_1359", + "location": [ + [ + "NC_000913", + 1432411, + "+", + 576 + ] + ], + "md5": "186b8344de87b1e95dec9ace22a580a2", + "parent_gene": "", + "protein_md5": "d4e1941843cc506896cb4cc8ff3c2129", + "protein_translation": "MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004599" + ], + [ + "gene_synonym", + "ECK1369" + ], + [ + "gene_synonym", + "EcoGene:EG13372" + ], + [ + "gene_synonym", + "GI:16129335" + ], + [ + "gene_synonym", + "GeneID:948973" + ], + [ + "gene_synonym", + "JW1368" + ], + [ + "gene_synonym", + "NP_415892.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI0" + ], + [ + "gene_synonym", + "b1374" + ], + [ + "gene_synonym", + "pinR" + ], + [ + "gene_synonym", + "ynaD" + ] + ], + "dna_sequence": "ATGTCTCGAATTTTTGCTTACTGTCGGATATCAACGCTGGATCAGACCACCGAAAATCAACGCCGGGAAATCGAAAGTGCAGGTTTTAAAATCAAACCTCAGCAAATAATCGAAGAACACATTAGCGGCTCAGCAGCAACCAGTGAGCGTCCTGGTTTTAACCGGTTGCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGTGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCTCCTGTGTTAAATGAAGAACAGAAACAGGTGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATATAA", + "dna_sequence_length": 591, + "functions": [ + "Rac prophage", + "putative site-specific recombinase" + ], + "id": "CDS_1360", + "location": [ + [ + "NC_000913", + 1433674, + "-", + 591 + ] + ], + "md5": "6c09218dddcfab8495b072b24731f14e", + "parent_gene": "", + "protein_md5": "eccf7a81c8bf1df92f290f9145834d8d", + "protein_translation": "MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004602" + ], + [ + "gene_synonym", + "ECK1370" + ], + [ + "gene_synonym", + "EcoGene:EG13373" + ], + [ + "gene_synonym", + "GI:345452718" + ], + [ + "gene_synonym", + "GeneID:946078" + ], + [ + "gene_synonym", + "JW1369" + ], + [ + "gene_synonym", + "NP_415893.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76073" + ], + [ + "gene_synonym", + "b1375" + ], + [ + "gene_synonym", + "ynaE" + ] + ], + "dna_sequence": "ATGAAATCAAAAGACACCCTAAAGTGGTTCCCTGCGCAGCTTCCTGAAGTAAGAATTATCCTAGGGGATGCTGTAGTGGAAGTAGCAAAACAGGGAAGACCTATCAATACCAGAACATTGCTTGATTACATTGAAGGAAACATAAAGAAAACATCATGGCTGGATAACAAAGAATTATTACAAACAGCGATATCAGTTCTTAAAGACAACCAAAATTTAAATGGTAAAATGTAA", + "dna_sequence_length": 234, + "functions": [ + "cold shock protein, Rac prophage" + ], + "id": "CDS_1361", + "location": [ + [ + "NC_000913", + 1434224, + "-", + 234 + ] + ], + "md5": "da8bdff89cc540676feaeb0c3153d041", + "parent_gene": "", + "protein_md5": "c6a48fbd57c6ce0fd88a37e13aa719da", + "protein_translation": "MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4447" + ], + [ + "gene_synonym", + "EcoGene:EG14435" + ], + [ + "gene_synonym", + "GeneID:5625564" + ], + [ + "gene_synonym", + "b4638" + ], + [ + "gene_synonym", + "ttcC" + ] + ], + "dna_sequence": "ATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAG", + "dna_sequence_length": 51, + "id": "CDS_1362", + "location": [ + [ + "NC_000913", + 1435008, + "-", + 51 + ] + ], + "md5": "7e3e6fafe2c11882751eff454705e738", + "parent_gene": "", + "protein_md5": "ceb6fc408a59c3961b6e918e7fbaa678", + "protein_translation": "MSQNQEISKKEQYNLNK", + "protein_translation_length": 17, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004605" + ], + [ + "gene_synonym", + "ECK1371" + ], + [ + "gene_synonym", + "EcoGene:EG12674" + ], + [ + "gene_synonym", + "GI:90111262" + ], + [ + "gene_synonym", + "GeneID:945948" + ], + [ + "gene_synonym", + "JW1370" + ], + [ + "gene_synonym", + "NP_415894.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37903" + ], + [ + "gene_synonym", + "b1376" + ], + [ + "gene_synonym", + "uspF" + ], + [ + "gene_synonym", + "ynaF" + ], + [ + "gene_synonym", + "yzzL" + ] + ], + "dna_sequence": "ATGAACAGAACGATTCTTGTCCCTATCGATATTTCCGATTCAGAATTAACTCAACGCGTGATTAGCCACGTTGAGGAAGAGGCAAAGATTGATGATGCAGAGGTTCATTTCCTGACGGTAATACCTTCACTGCCCTACTATGCCTCTCTGGGTTTAGCGTATTCCGCAGAATTACCGGCAATGGATGACCTGAAAGCGGAAGCCAAATCGCAACTGGAAGAGATCATTAAAAAATTTAAACTGCCAACCGACAGAGTGCATGTCCATGTTGAGGAAGGCTCGCCCAAAGACCGCATTCTGGAATTGGCGAAGAAGATCCCCGCTCATATGATCATCATTGCTTCCCATCGACCGGATATCACCACTTATCTGCTCGGTTCCAACGCCGCAGCTGTAGTGCGTCACGCAGAGTGCTCCGTGCTGGTTGTGCGCTGA", + "dna_sequence_length": 435, + "functions": [ + "stress-induced protein, ATP-binding protein" + ], + "id": "CDS_1363", + "location": [ + [ + "NC_000913", + 1435619, + "-", + 435 + ] + ], + "md5": "6cb68e61ce2bd0eb43a1098a7105afa9", + "parent_gene": "", + "protein_md5": "c540cf026cfa9db396bbab069be25221", + "protein_translation": "MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004608" + ], + [ + "gene_synonym", + "ECK1372" + ], + [ + "gene_synonym", + "EcoGene:EG13375" + ], + [ + "gene_synonym", + "GI:16129338" + ], + [ + "gene_synonym", + "GeneID:946313" + ], + [ + "gene_synonym", + "JW1371" + ], + [ + "gene_synonym", + "NP_415895.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77747" + ], + [ + "gene_synonym", + "b1377" + ], + [ + "gene_synonym", + "ompN" + ], + [ + "gene_synonym", + "ynaG" + ] + ], + "dna_sequence": "ATGAAAAGCAAAGTACTGGCACTTTTAATTCCTGCCCTGCTCGCCGCAGGTGCTGCACATGCAGCCGAAGTTTATAATAAAGACGGCAACAAATTAGATCTGTATGGCAAAGTTGATGGCCTGCATTATTTTTCTGATAATTCAGCGAAAGATGGCGACCAGAGCTATGCGCGTCTGGGTTTTAAAGGCGAAACCCAAATTAACGATCAACTCACTGGCTACGGTCAATGGGAATACAATATTCAGGCAAACAACACTGAATCTTCAAAAAACCAGTCATGGACCCGTCTGGCATTTGCCGGGCTGAAATTTGCAGATTACGGTTCTTTCGATTACGGACGTAATTATGGCGTAATGTACGACATCGAAGGCTGGACCGATATGCTGCCTGAATTTGGCGGTGACTCTTATACCAATGCAGACAACTTTATGACTGGTCGAGCCAATGGCGTCGCGACTTATCGTAATACTGATTTCTTCGGTCTGGTAAATGGTCTGAACTTCGCGGTGCAGTATCAAGGTAACAACGAAGGAGCCAGTAATGGTCAGGAAGGCACCAACAACGGACGTGATGTTCGCCATGAAAACGGTGACGGCTGGGGTCTTTCCACAACATATGATTTAGGCATGGGCTTTAGCGCTGGTGCGGCATACACCTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGTTTGGCGACAGCGATTATGCTGTGGCAAACAAAACCCAGAATTTTGAAGTCACTGCACAGTACCAGTTTGATTTTGGTCTGCGTCCGGCAGTCTCTTTCCTGATGTCTAAAGGCCGTGACCTGCACGCTGCGGGTGGTGCAGACAACCCGGCAGGTGTTGATGATAAAGATCTGGTTAAATACGCCGATATTGGCGCGACTTACTATTTCAATAAAAACATGTCCACCTACGTTGACTATAAAATCAACCTGTTGGATGAAGATGACAGCTTCTACGCTGCCAATGGCATCTCTACCGATGATATTGTCGCTTTAGGTCTGGTTTATCAGTTCTAA", + "dna_sequence_length": 1134, + "functions": [ + "outer membrane pore protein N, non-specific" + ], + "id": "CDS_1364", + "location": [ + [ + "NC_000913", + 1436893, + "-", + 1134 + ] + ], + "md5": "a2dcbf979a1293d18f88765746a26d93", + "parent_gene": "", + "protein_md5": "d4e20c0f6d6452e637d57fb53064a100", + "protein_translation": "MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADIGATYYFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004613" + ], + [ + "gene_synonym", + "ECK1374" + ], + [ + "gene_synonym", + "EcoGene:EG13183" + ], + [ + "gene_synonym", + "GI:16129339" + ], + [ + "gene_synonym", + "GeneID:946587" + ], + [ + "gene_synonym", + "JW1372" + ], + [ + "gene_synonym", + "NP_415896.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52647" + ], + [ + "gene_synonym", + "b1378" + ], + [ + "gene_synonym", + "nifJ" + ], + [ + "gene_synonym", + "pfo" + ], + [ + "gene_synonym", + "soi-9" + ], + [ + "gene_synonym", + "ydbK" + ] + ], + "dna_sequence": "ATGATTACTATTGACGGTAATGGCGCGGTTGCTTCGGTCGCATTTCGCACCAGTGAAGTTATCGCCATCTACCCTATTACCCCCAGTTCCACGATGGCAGAACAGGCTGATGCCTGGGCCGGAAACGGCTTAAAGAACGTTTGGGGAGACACACCACGCGTGGTTGAAATGCAGTCGGAAGCGGGTGCTATCGCTACCGTGCATGGCGCTTTGCAGACGGGTGCCCTTTCAACATCGTTTACGTCATCGCAGGGTTTGCTGCTGATGATCCCGACGCTGTACAAACTGGCAGGCGAACTAACACCGTTTGTCCTGCATGTAGCGGCACGTACCGTTGCCACACATGCACTCTCTATTTTTGGCGATCATTCCGACGTTATGGCGGTGCGCCAGACGGGTTGCGCGATGTTGTGTGCAGCAAACGTCCAGGAAGCGCAAGACTTTGCTCTCATTTCGCAAATCGCGACGCTGAAAAGCCGCGTGCCATTTATTCATTTCTTTGATGGTTTCCGCACGTCCCACGAAATCAATAAAATTGTCCCGCTGGCCGATGACACGATTCTTGATCTCATGCCGCAGGTCGAAATTGATGCTCATCGCGCCCGGGCACTCAACCCGGAACATCCGGTGATCCGCGGTACGTCCGCCAATCCTGACACTTATTTCCAGTCTCGCGAAGCCACCAACCCATGGTACAACGCGGTCTATGACCATGTTGAACAGGCGATGAATGATTTCTCTGCCGCGACAGGTCGTCAGTATCAGCCGTTTGAATATTACGGGCATCCGCAAGCGGAACGGGTGATTATCCTGATGGGCTCTGCCATTGGCACCTGTGAAGAAGTGGTTGATGAATTGCTAACCCGTGGCGAAAAAGTTGGCGTGCTGAAAGTTCGCCTGTACCGCCCCTTCTCCGCTAAACATTTACTGCAAGCTCTGCCGGGATCCGTACGCAGCGTGGCGGTACTGGACAGAACCAAAGAACCCGGTGCCCAGGCAGAACCGCTCTATCTGGATGTAATGACCGCACTGGCAGAAGCCTTTAATAATGGCGAGCGCGAAACTCTGCCCCGTGTCATTGGTGGGCGCTATGGTCTTTCATCCAAAGAATTTGGCCCAGACTGTGTACTGGCGGTATTTGCCGAGCTCAACGCGGCTAAACCGAAAGCGCGCTTTACGGTTGGTATTTACGATGATGTGACCAATCTGTCACTGCCGTTGCCGGAAAACACCCTGCCAAACTCGGCGAAACTGGAAGCCTTGTTTTATGGCCTTGGTAGTGATGGCAGCGTTTCCGCGACCAAAAACAATATCAAGATTATCGGTAATTCCACGCCGTGGTACGCACAGGGCTATTTTGTTTACGACTCCAAAAAGGCGGGCGGCCTGACGGTTTCTCACCTTCGAGTGAGCGAACAGCCGATTCGTTCCGCTTATCTCATTTCCCAGGCTGATTTTGTTGGCTGCCACCAGTTGCAGTTTATCGATAAATATCAGATGGCTGAGCGTTTAAAACCTGGCGGCATTTTCCTGCTCAACACGCCGTACAGCGCAGATGAAGTGTGGTCGCGCTTGCCGCAAGAAGTTCAGGCCGTGTTAAACCAGAAAAAAGCGCGCTTCTATGTGATTAACGCGGCGAAAATCGCCCGCGAATGTGGCCTGGCGGCCCGTATTAATACCGTCATGCAGATGGCTTTTTTCCATCTGACGCAAATTCTGCCTGGCGATAGCGCCCTCGCAGAATTGCAGGGTGCGATTGCCAAAAGTTACAGTAGCAAAGGCCAGGATCTGGTGGAACGCAACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAATCGACCGCCAGTGGTTTCCGATGCCGCCCCTGATTTCGTGAAAACCGTAACCGCTGCGATGCTCGCCGGGCTTGGTGACGCCCTCCCCGTTTCGGCGCTGCCGCCAGACGGCACCTGGCCGATGGGCACTACGCGCTGGGAAAAACGCAATATCGCCGAAGAGATCCCCATCTGGAAAGAGGAACTCTGTACCCAATGTAACCACTGCGTTGCCGCTTGCCCACACTCAGCTATTCGCGCAAAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAGCCTGCATTCGCTGGATGTGAAATCGCGTGATATGCGCGGGCAGAAATATGTCTTGCAGGTGGCACCGGAAGATTGCACCGGTTGTAACCTGTGCGTCGAAGTTTGCCCGGCGAAAGACCGTCAGAATCCAGAGATTAAAGCCATCAATATGATGTCTCGCCTGGAACATGTCGAAGAAGAGAAAATCAATTACGATTTCTTCCTCAACCTGCCAGAAATCGACCGTAGCAAACTGGAACGTATTGATATTCGTACATCGCAGCTGATTACACCGCTGTTTGAATATTCAGGTGCTTGCTCCGGTTGTGGCGAGACGCCGTATATTAAATTACTGACTCAGCTCTATGGCGACCGGATGTTGATCGCTAACGCCACTGGCTGTTCTTCAATTTATGGCGGTAACCTGCCCTCTACACCGTATACCACCGATGCCAACGGTCGTGGGCCGGCATGGGCGAACTCTCTATTTGAAGATAATGCCGAATTTGGCCTTGGTTTCCGCCTGACGGTCGATCAACACCGTGTCCGCGTGCTGCGTCTGCTGGATCAATTTGCCGATAAAATCCCGGCGGAATTACTGACGGCGTTGAAATCAGACGCCACGCCAGAGGTTCGTCGTGAACAGGTTGCAGCTTTACGCCAGCAACTCAACGATGTTGCCGAAGCACATGAACTGCTACGTGATGCAGATGCACTGGTGGAAAAATCAATCTGGCTGATTGGTGGTGATGGCTGGGCTTACGATATCGGCTTTGGCGGTCTGGATCATGTATTGAGTTTGACGGAAAACGTCAACATTCTGGTGCTGGATACGCAATGCTATTCCAACACCGGTGGTCAGGCGTCGAAAGCGACACCGCTGGGTGCAGTAACTAAATTTGGCGAGCACGGCAAACGTAAAGCGCGTAAAGATCTTGGCGTCAGTATGATGATGTACGGTCATGTTTATGTGGCGCAGATTTCTCTCGGCGCGCAGCTGAACCAGACGGTGAAAGCGATTCAGGAAGCGGAAGCGTATCCGGGGCCATCGCTGATCATTGCTTATAGCCCGTGTGAAGAGCATGGTTACGATCTGGCACTCAGCCACGACCAGATGCGCCAACTCACAGCTACCGGCTTCTGGCCGCTATATCGCTTTGATCCGCGTCGTGCCGATGAAGGCAAACTGCCGCTGGCCTTGGATTCACGCCCGCCGTCAGAAGCACCGGAAGAAACGTTACTTCACGAGCAACGTTTCCGTCGGCTGAATTCGCAGCAGCCAGAAGTGGCAGAACAGTTATGGAAAGATGCTGCAGCTGATTTGCAAAAACGCTATGACTTCCTGGCACAAATGGCCGGAAAAGCGGAAAAAAGCAACACCGATTAA", + "dna_sequence_length": 3525, + "functions": [ + "pyruvate-flavodoxin oxidoreductase" + ], + "id": "CDS_1365", + "location": [ + [ + "NC_000913", + 1440784, + "-", + 3525 + ] + ], + "md5": "082756e1366fee3b52c10b1fc427262c", + "parent_gene": "", + "protein_md5": "538ce3cc6086b9317efa6f6b9b76fbf0", + "protein_translation": "MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISQIATLKSRVPFIHFFDGFRTSHEINKIVPLADDTILDLMPQVEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEAPEETLLHEQRFRRLNSQQPEVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD", + "protein_translation_length": 1174, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285050" + ], + [ + "gene_synonym", + "ECK1375" + ], + [ + "gene_synonym", + "EcoGene:EG13182" + ], + [ + "gene_synonym", + "GI:94541111" + ], + [ + "gene_synonym", + "GeneID:4056027" + ], + [ + "gene_synonym", + "JW5215" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACW2" + ], + [ + "gene_synonym", + "YP_588453.1" + ], + [ + "gene_synonym", + "b4529" + ], + [ + "gene_synonym", + "ydbJ" + ] + ], + "dna_sequence": "ATGCGAGCAGCGTTTTGGGTAGGGTGTGCCGCTTTATTGTTGTCGGCGTGTAGTAGTGAACCTGTTCAGCAGGCGACTGCCGCGCACGTAGCGCCAGGTTTAAAAGCGTCGATGTCCAGTAGTGGAGAAGCAAATTGTGCAATGATCGGCGGTTCGCTTTCTGTTGCCCGTCAACTGGATGGTACGGCGATTGGGATGTGTGCATTACCCAACGGCAAACGCTGTAGCGAACAGTCACTTGCCGCCGGGAGCTGTGGCAGCTATTAA", + "dna_sequence_length": 267, + "functions": [ + "DUF333 family putative lipoprotein" + ], + "id": "CDS_1366", + "location": [ + [ + "NC_000913", + 1441058, + "+", + 267 + ] + ], + "md5": "9d507cd1e1fc711ecd71735949fd85df", + "parent_gene": "", + "protein_md5": "70ae7df1b964c15eb97ff2db11c457d1", + "protein_translation": "MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEANCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004616" + ], + [ + "gene_synonym", + "ECK1376" + ], + [ + "gene_synonym", + "EcoGene:EG13181" + ], + [ + "gene_synonym", + "GI:16129340" + ], + [ + "gene_synonym", + "GeneID:946525" + ], + [ + "gene_synonym", + "JW1374" + ], + [ + "gene_synonym", + "NP_415897.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52644" + ], + [ + "gene_synonym", + "b1379" + ], + [ + "gene_synonym", + "hslJ" + ], + [ + "gene_synonym", + "ydbI" + ] + ], + "dna_sequence": "ATGAAGAAAGTAGCCGCGTTTGTTGCGCTAAGCCTGCTGATGGCGGGATGTGTAAGTAATGACAAAATTGCTGTTACGCCAGAACAGCTACAGCATCATCGCTTTGTGCTGGAAAGCGTAAACGGTAAGCCCGTGACCAGCGATAAAAATCCGCCAGAAATCAGCTTTGGTGAAAAAATGATGATTTCCGGCAGCATGTGTAACCGCTTTAGCGGTGAAGGCAAACTGTCTAATGGTGAACTGACAGCCAAAGGGCTGGCAATGACCCGTATGATGTGCGCTAACCCGCAGCTTAATGAACTCGATAACACCATTAGCGAAATGCTGAAAGAAGGTGCACAAGTGGATCTGACCGCGAACCAGTTAACGCTGGCGACCGCAAAACAGACATTAACTTATAAGCTGGCGGATTTAATGAATTAA", + "dna_sequence_length": 423, + "functions": [ + "heat-inducible lipoprotein involved in novobiocin resistance" + ], + "id": "CDS_1367", + "location": [ + [ + "NC_000913", + 1441743, + "-", + 423 + ] + ], + "md5": "0a5b0de00e21d34ae148f778f25cf039", + "parent_gene": "", + "protein_md5": "a742fedb3e02d0abb3da07ddc4d939db", + "protein_translation": "MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004619" + ], + [ + "gene_synonym", + "ECK1377" + ], + [ + "gene_synonym", + "EcoGene:EG13186" + ], + [ + "gene_synonym", + "GI:16129341" + ], + [ + "gene_synonym", + "GeneID:946315" + ], + [ + "gene_synonym", + "JW1375" + ], + [ + "gene_synonym", + "NP_415898.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52643" + ], + [ + "gene_synonym", + "b1380" + ], + [ + "gene_synonym", + "hslF" + ], + [ + "gene_synonym", + "hslI" + ], + [ + "gene_synonym", + "htpH" + ], + [ + "gene_synonym", + "ldhA" + ] + ], + "dna_sequence": "ATGAAACTCGCCGTTTATAGCACAAAACAGTACGACAAGAAGTACCTGCAACAGGTGAACGAGTCCTTTGGCTTTGAGCTGGAATTTTTTGACTTTCTGCTGACGGAAAAAACCGCTAAAACTGCCAATGGCTGCGAAGCGGTATGTATTTTCGTAAACGATGACGGCAGCCGCCCGGTGCTGGAAGAGCTGAAAAAGCACGGCGTTAAATATATCGCCCTGCGCTGTGCCGGTTTCAATAACGTCGACCTTGACGCGGCAAAAGAACTGGGGCTGAAAGTAGTCCGTGTTCCAGCCTATGATCCAGAGGCCGTTGCTGAACACGCCATCGGTATGATGATGACGCTGAACCGCCGTATTCACCGCGCGTATCAGCGTACCCGTGATGCTAACTTCTCTCTGGAAGGTCTGACCGGCTTTACTATGTATGGCAAAACGGCAGGCGTTATCGGTACCGGTAAAATCGGTGTGGCGATGCTGCGCATTCTGAAAGGTTTTGGTATGCGTCTGCTGGCGTTCGATCCGTATCCAAGTGCAGCGGCGCTGGAACTCGGTGTGGAGTATGTCGATCTGCCAACCCTGTTCTCTGAATCAGACGTTATCTCTCTGCACTGCCCGCTGACACCGGAAAACTATCATCTGTTGAACGAAGCCGCCTTCGAACAGATGAAAAATGGCGTGATGATCGTCAATACCAGTCGCGGTGCATTGATTGATTCTCAGGCAGCAATTGAAGCGCTGAAAAATCAGAAAATTGGTTCGTTGGGTATGGACGTGTATGAGAACGAACGCGATCTATTCTTTGAAGATAAATCCAACGACGTGATCCAGGATGACGTATTCCGTCGCCTGTCTGCCTGCCACAACGTGCTGTTTACCGGGCACCAGGCATTCCTGACAGCAGAAGCTCTGACCAGTATTTCTCAGACTACGCTGCAAAACTTAAGCAATCTGGAAAAAGGCGAAACCTGCCCGAACGAACTGGTTTAA", + "dna_sequence_length": 990, + "functions": [ + "fermentative D-lactate dehydrogenase, NAD-dependent" + ], + "id": "CDS_1368", + "location": [ + [ + "NC_000913", + 1442843, + "-", + 990 + ] + ], + "md5": "ef7706273ab60ae5ae7eecf5dde25361", + "parent_gene": "", + "protein_md5": "035d31818ee331523ed89644e47d97dc", + "protein_translation": "MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANGCEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004623" + ], + [ + "gene_synonym", + "ECK1378" + ], + [ + "gene_synonym", + "EcoGene:EG13180" + ], + [ + "gene_synonym", + "GI:16129342" + ], + [ + "gene_synonym", + "GeneID:945949" + ], + [ + "gene_synonym", + "JW1376" + ], + [ + "gene_synonym", + "NP_415899.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52645" + ], + [ + "gene_synonym", + "b1381" + ], + [ + "gene_synonym", + "ydbH" + ] + ], + "dna_sequence": "ATGCTGGGTAAATATAAAGCCGTTCTCGCGCTGTTATTACTGATTATTCTTGTGCCGTTGACGCTGCTGATGACGCTCGGGCTGTGGGTTCCCACGCTGGCGGGCATCTGGCTACCGCTCGGGACACGTATTGCATTAGATGAAAGCCCACGCATTACGCGTAAAGGTTTAATCATTCCCGATCTCCGTTATCTGGTGGGAGATTGTCAGCTTGCGCATATCACCAACGCCAGCCTTTCACATCCCAGCCGCTGGTTATTGAACGTCGGCACGGTAGAACTTGATTCTGCTTGTCTGGCGAAATTGCCGCAGACGGAGCAATCGCCAGCCGCTCCAAAAACACTCGCGCAGTGGCAGGCCATGCTGCCTAACACCTGGATCAATATCGATAAACTGATTTTTTCTCCCTGGCAGGAATGGCAGGGAAAACTCTCTCTCGCATTAACCTCTGATATCCAGCAACTGCGTTATCAGGGCGAAAAAGTTAAATTTCAAGGCCAGCTGAAAGGGCAACAACTTACAGTCAGCGAACTGGATGTCGTCGCGTTTGAAAATCAGCCGCCGGTAAAACTGGTGGGGGAATTTGCTATGCCGCTCGTGCCGGATGGACTTCCTGTAAGTGGGCATGCTACTGCGACGTTAAACTTGCCGCAGGAACCGTCACTGGTGGATGCCGAGCTGGACTGGCAGGAAAATAGCGGGCAATTGATCGTGCTGGCACGGGATAACGGCGATCCGTTGCTCGATTTGCCGTGGCAAATTACTCGTCAACAATTGACCGTAAGCGATGGTCGCTGGAGCTGGCCGTATGCAGGTTTTCCTTTGAGTGGCCGACTGGGTGTCAAAGTCGACAACTGGCAGGCAGGGCTTGAGAACGCTCTGGTCAGCGGACGACTGAGTGTGCTGACCCAGGGGCAAGCGGGTAAGGGCAACGCGGTGCTTAATTTTGGCCCAGGAAAATTAAGCATGGATAACAGTCAGCTGCCTCTGCAGCTGACCGGTGAAGCGAAACAGGCGGACCTCATTTTATATGCCCGTTTACCTGCGCAGCTAAGTGGAAGTCTGTCTGACCCAACGCTGACCTTTGAGCCAGGCGCGTTACTTCGTTCAAAGGGAAGAGTCATCGATTCGCTGGACATCGATGAAATCCGCTGGCCTTTAGCGGGTGTAAAAGTCACCCAACGTGGTGTTGACGGACGTTTGCAGGCCATCTTGCAGGCGCATGAAAATGAACTGGGCGATTTCGTGCTGCATATGGATGGGCTGGCGAATGATTTTCTCCCTGACGCTGGCCGCTGGCAGTGGCGCTACTGGGGAAAAGGGAGTTTTACACCGATGAATGCCACCTGGGATGTCGCAGGAAAAGGTGAGTGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTGGTGGCCTAAACAATCACTGACCGTATTCCAGCCGCTGGTGCCACCCGACTGGAAGATGAACTTACGCGATGGTGAACTGTATGCTCAGGTTGCATTTTCTGCTGCGCCTGAACAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGGCCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAATGAAAAATGGATTGTGAAAGATGGCTGGCTGGCGAATAGCGGGCCGATGACATTGCGACTGGATAAAGACACTGCGGATGCGGTGGTAAAAGACAATATGACTGCGGGTTCAGCAATTAACTGGTTGCGCTATATGGAAATTAGCCGTTCATCGACAAAAATTAATTTAGATAATCTCGGTTTATTAACCATGCAGGCCAACATTACAGGTACCAGTCGCGTTGATGGTAAAAGCGGTACGGTAAACCTTAATTACCATCATGAAGAGAATATTTTTACGCTGTGGCGCAGTTTACGCTTTGGCGATAATCTCCAGGCATGGCTGGAGCAGAACGCACGTCTGCCGGGAAATGACTGTCCGCAAGGAAAAGAGTGTGAGGAAAAACAATGA", + "dna_sequence_length": 2640, + "functions": [ + "putative membrane-anchored protein, function unknown" + ], + "id": "CDS_1369", + "location": [ + [ + "NC_000913", + 1443051, + "+", + 2640 + ] + ], + "md5": "2bd3fdcc52a6738d37b80611cf4dfbf2", + "parent_gene": "", + "protein_md5": "da202721fceb9b057fe37d385e1fdb21", + "protein_translation": "MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRIALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKLPQTEQSPAAPKTLAQWQAMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGEKVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFAMPLVPDGLPVSGHATATLNLPQEPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLSGRLGVKVDNWQAGLENALVSGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTGEAKQADLILYARLPAQLSGSLSDPTLTFEPGALLRSKGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATWDVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPIVWVRDAQHPSFSGALSLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLRGNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAWMPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTEEEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAFSGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEISRSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQAWLEQNARLPGNDCPQGKECEEKQ", + "protein_translation_length": 879, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004625" + ], + [ + "gene_synonym", + "ECK1379" + ], + [ + "gene_synonym", + "EcoGene:EG14298" + ], + [ + "gene_synonym", + "GI:16129343" + ], + [ + "gene_synonym", + "GeneID:945946" + ], + [ + "gene_synonym", + "JW1377" + ], + [ + "gene_synonym", + "NP_415900.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64448" + ], + [ + "gene_synonym", + "b1382" + ], + [ + "gene_synonym", + "ynbE" + ] + ], + "dna_sequence": "ATGAAAATTTTACTGGCTGCGTTGACGTCATCTTTTATGCTGGTTGGCTGTACGCCTCGCATTGAAGTCGCTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGA", + "dna_sequence_length": 186, + "functions": [ + "lipoprotein" + ], + "id": "CDS_1370", + "location": [ + [ + "NC_000913", + 1445687, + "+", + 186 + ] + ], + "md5": "17b6e96073c639f169730d74f5aa6364", + "parent_gene": "", + "protein_md5": "74101bc33104b8f8cf019df3d9166aa5", + "protein_translation": "MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIIIKADKDVEELLETRSDLF", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004627" + ], + [ + "gene_synonym", + "ECK1380" + ], + [ + "gene_synonym", + "EcoGene:EG13733" + ], + [ + "gene_synonym", + "GI:90111263" + ], + [ + "gene_synonym", + "GeneID:945943" + ], + [ + "gene_synonym", + "JW5216" + ], + [ + "gene_synonym", + "NP_415901.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76076" + ], + [ + "gene_synonym", + "b1383" + ], + [ + "gene_synonym", + "ydbL" + ] + ], + "dna_sequence": "ATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTGAAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCGAACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATCGCGAAACTCGCCGGGCAAAAGCTCGTAGCTCGGGCCAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCGAAAATTTTAA", + "dna_sequence_length": 327, + "functions": [ + "DUF1318 family protein" + ], + "id": "CDS_1371", + "location": [ + [ + "NC_000913", + 1445880, + "+", + 327 + ] + ], + "md5": "d367b0ea126ad1f85902aebf2c8df23c", + "parent_gene": "", + "protein_md5": "e17b93cceda521326f1ff88abfa8ce51", + "protein_translation": "MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004630" + ], + [ + "gene_synonym", + "ECK1381" + ], + [ + "gene_synonym", + "EcoGene:EG13422" + ], + [ + "gene_synonym", + "GI:16129345" + ], + [ + "gene_synonym", + "GeneID:945941" + ], + [ + "gene_synonym", + "JW1379" + ], + [ + "gene_synonym", + "NP_415902.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47129" + ], + [ + "gene_synonym", + "b1384" + ], + [ + "gene_synonym", + "feaR" + ], + [ + "gene_synonym", + "maoB" + ], + [ + "gene_synonym", + "maoR" + ], + [ + "gene_synonym", + "maoX" + ], + [ + "gene_synonym", + "ydbM" + ] + ], + "dna_sequence": "ATGAACCCCGCAGTGGATAATGAGTTTCAGCAATGGCTTTCCCAAATCAATCAGGTATGCGGAAATTTTACCGGACGCCTGCTGACTGAGCGTTACACGGGTGTACTGGACACGCATTTTGCCAAAGGACTAAAGCTGAGTACCGTGACAACCAGCGGGGTGAATTTATCCCGCACCTGGCAGGAAGTAAAAGGCAGCGACGATGCCTGGTTTTACACCGTTTTTCAGCTTAGTGGTCAGGCAATAATGGAGCAGGATGAGCGTCAGGTGCAGATTGGCGCTGGCGATATTACGTTACTCGATGCCTCACGCCCCTGTTCGCTTTACTGGCAGGAGTCTTCTAAACAGATTTCATTACTTTTGCCACGCACTCTGCTGGAACAATATTTTCCCCATCAAAAACCTATCTGCGCAGAAAGACTGGACGCTGACTTACCCATGGTGCAACTCAGTCATCGCCTGTTACAGGAGAGCATGAATAATCCGGCACTTTCTGAAACAGAAAGTGAAGCTGCGCTACAGGCGATGGTGTGTCTGCTGCGCCCGGTACTTCATCAGCGGGAATCTGTTCAACCTCGTCGTGAACGTCAGTTTCAAAAAGTGGTTACGTTGATAGACGATAATATTCGCGAAGAGATATTACGCCCGGAGTGGATAGCCGGAGAGACAGGTATGTCAGTACGTAGTTTGTACCGAATGTTTGCCGATAAAGGTTTGGTAGTCGCGCAATATATTCGTAACCGTCGTCTCGATTTTTGTGCAGATGCGATTCGCCATGCCGCAGATGATGAAAAACTGGCAGGCATCGGCTTTCATTGGGGATTTTCTGACCAGAGTCATTTTTCAACGGTATTTAAGCAACGCTTTGGGATGACGCCAGGCGAGTATCGACGTAAATTCCGCTAA", + "dna_sequence_length": 906, + "functions": [ + "transcriptional activator for tynA and feaB" + ], + "id": "CDS_1372", + "location": [ + [ + "NC_000913", + 1447283, + "-", + 906 + ] + ], + "md5": "f3c5b856b174d22abd03bdf602a8028c", + "parent_gene": "", + "protein_md5": "5e566745cbae80e80f19e4370d118157", + "protein_translation": "MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004637" + ], + [ + "gene_synonym", + "ECK1382" + ], + [ + "gene_synonym", + "EcoGene:EG13179" + ], + [ + "gene_synonym", + "GI:90111264" + ], + [ + "gene_synonym", + "GeneID:945933" + ], + [ + "gene_synonym", + "JW1380" + ], + [ + "gene_synonym", + "NP_415903.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P80668" + ], + [ + "gene_synonym", + "b1385" + ], + [ + "gene_synonym", + "feaB" + ], + [ + "gene_synonym", + "padA" + ], + [ + "gene_synonym", + "ydbG" + ] + ], + "dna_sequence": "ATGACAGAGCCGCATGTAGCAGTATTAAGCCAGGTCCAACAGTTTCTCGATCGTCAACACGGTCTTTATATTGATGGTCGTCCTGGCCCCGCACAAAGTGAAAAACGGTTGGCGATCTTTGATCCGGCCACCGGGCAAGAAATTGCGTCTACTGCTGATGCCAACGAAGCGGATGTAGATAACGCAGTCATGTCTGCCTGGCGGGCCTTTGTCTCGCGTCGCTGGGCCGGGCGATTACCCGCAGAGCGTGAACGTATTCTGCTACGTTTTGCTGATCTGGTGGAGCAGCACAGTGAGGAGCTGGCGCAACTGGAAACCCTGGAGCAAGGCAAGTCAATTGCCATTTCCCGTGCTTTTGAAGTGGGCTGTACGCTGAACTGGATGCGTTATACCGCCGGGTTAACGACCAAAATCGCGGGTAAAACGCTGGACTTGTCGATTCCCTTACCCCAGGGGGCGCGTTATCAGGCCTGGACGCGTAAAGAGCCGGTTGGCGTAGTGGCGGGAATTGTGCCATGGAACTTTCCGTTGATGATTGGTATGTGGAAGGTGATGCCAGCACTGGCAGCAGGCTGTTCAATCGTGATTAAGCCTTCGGAAACCACGCCACTGACGATGTTGCGCGTGGCGGAACTGGCCAGCGAGGCTGGTATCCCTGATGGCGTTTTTAATGTCGTCACCGGGTCAGGTGCTGTATGCGGCGCGGCCCTGACGTCACATCCTCATGTTGCGAAAATCAGTTTTACCGGTTCAACCGCGACGGGAAAAGGTATTGCCAGAACTGCTGCTGATCACTTAACGCGTGTAACGCTGGAACTGGGCGGTAAAAACCCGGCAATTGTATTAAAAGATGCTGATCCGCAATGGGTTATTGAAGGCTTGATGACCGGAAGCTTCCTGAATCAAGGGCAAGTATGCGCCGCCAGTTCGCGAATTTATATTGAAGCGCCGTTGTTTGACACGCTGGTTAGTGGATTTGAGCAGGCGGTAAAATCGTTGCAAGTGGGACCGGGGATGTCACCTGTTGCACAGATTAACCCTTTGGTTTCTCGTGCGCACTGCGACAAAGTGTGTTCATTCCTCGACGATGCGCAGGCACAGCAAGCAGAGCTGATTCGCGGGTCGAATGGACCAGCCGGAGAGGGGTATTATGTTGCGCCAACGCTGGTGGTAAATCCCGATGCTAAATTGCGCTTAACTCGTGAAGAGGTGTTTGGTCCGGTGGTAAACCTGGTGCGAGTAGCGGATGGAGAAGAGGCGTTACAACTGGCAAACGACACGGAATATGGCTTAACTGCCAGTGTCTGGACGCAAAATCTCTCCCAGGCTCTGGAATATAGCGATCGCTTACAGGCAGGGACGGTGTGGGTAAACAGCCATACCTTAATTGACGCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAA", + "dna_sequence_length": 1500, + "functions": [ + "phenylacetaldehyde dehydrogenase" + ], + "id": "CDS_1373", + "location": [ + [ + "NC_000913", + 1447519, + "+", + 1500 + ] + ], + "md5": "94747b91e514f380117efe579a356df7", + "parent_gene": "", + "protein_md5": "a898d666b1d3b33a18542d1995da4920", + "protein_translation": "MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVRY", + "protein_translation_length": 499, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004639" + ], + [ + "gene_synonym", + "ECK1383" + ], + [ + "gene_synonym", + "EcoGene:EG13140" + ], + [ + "gene_synonym", + "GI:162135920" + ], + [ + "gene_synonym", + "GeneID:945939" + ], + [ + "gene_synonym", + "JW1381" + ], + [ + "gene_synonym", + "NP_415904.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46883" + ], + [ + "gene_synonym", + "b1386" + ], + [ + "gene_synonym", + "maoA" + ], + [ + "gene_synonym", + "tynA" + ] + ], + "dna_sequence": "ATGGGAAGCCCCTCTCTGTATTCTGCCCGTAAAACAACCCTGGCGTTGGCAGTCGCCTTAAGTTTCGCCTGGCAAGCGCCGGTATTTGCCCACGGTGGTGAAGCGCATATGGTGCCAATGGATAAAACGCTTAAAGAATTTGGTGCCGATGTGCAGTGGGACGACTACGCCCAGCTCTTTACCCTGATTAAAGATGGCGCGTACGTGAAAGTGAAGCCTGGTGCGCAAACAGCAATTGTTAATGGTCAGCCTCTGGCACTGCAAGTACCGGTAGTGATGAAAGACAATAAAGCCTGGGTTTCTGACACCTTTATTAACGATGTTTTCCAGTCCGGGCTGGATCAAACCTTTCAGGTAGAAAAGCGCCCTCACCCACTTAATGCGCTAACTGCGGACGAAATTAAACAGGCCGTTGAAATTGTTAAAGCTTCCGCGGACTTCAAACCCAATACCCGTTTTACTGAGATCTCCCTGCTACCGCCAGATAAAGAAGCTGTCTGGGCGTTTGCGCTGGAAAACAAACCGGTTGACCAGCCGCGCAAAGCCGACGTCATTATGCTCGACGGCAAACATATCATCGAAGCGGTGGTGGATCTGCAAAACAACAAACTGCTCTCCTGGCAACCCATTAAAGACGCCCACGGTATGGTGTTGCTGGATGATTTCGCCAGTGTGCAGAACATTATTAACAACAGTGAAGAATTTGCCGCTGCCGTGAAGAAACGCGGTATTACTGATGCGAAAAAAGTGATTACCACGCCGCTGACCGTAGGTTATTTCGATGGTAAAGATGGCCTGAAACAAGATGCCCGGTTGCTCAAAGTCATCAGCTATCTTGATGTCGGTGATGGCAACTACTGGGCACATCCCATCGAAAACCTGGTGGCGGTCGTTGATTTAGAACAGAAAAAAATCGTTAAGATTGAAGAAGGTCCGGTAGTTCCGGTGCCAATGACCGCACGCCCATTTGATGGCCGTGACCGCGTTGCTCCGGCAGTTAAGCCTATGCAAATCATTGAGCCTGAAGGTAAAAATTACACCATTACTGGCGATATGATTCACTGGCGGAACTGGGATTTTCACCTCAGCATGAACTCTCGCGTCGGGCCGATGATCTCCACCGTGACTTATAACGACAATGGCACCAAACGCAAAGTCATGTACGAAGGTTCTCTCGGCGGCATGATTGTGCCTTACGGTGATCCTGATATTGGCTGGTACTTTAAAGCGTATCTGGACTCTGGTGACTACGGTATGGGCACGCTAACCTCACCAATTGCTCGTGGTAAAGATGCCCCGTCTAACGCAGTGCTCCTTAATGAAACCATCGCCGACTACACTGGCGTGCCGATGGAGATCCCTCGCGCTATCGCGGTATTTGAACGTTATGCCGGGCCGGAGTATAAGCATCAGGAAATGGGCCAGCCCAACGTCAGTACCGAACGCCGGGAGTTAGTGGTGCGCTGGATCAGTACAGTGGGTAACTATGACTACATTTTTGACTGGATCTTCCATGAAAACGGCACTATTGGCATCGATGCCGGTGCTACGGGCATCGAAGCGGTGAAAGGTGTTAAAGCGAAAACCATGCACGATGAGACGGCGAAAGATGACACGCGCTACGGCACGCTTATCGATCACAATATCGTGGGTACTACACACCAACATATTTATAATTTCCGCCTCGATCTGGATGTAGATGGCGAGAATAACAGCCTGGTGGCGATGGACCCAGTGGTAAAACCGAATACTGCCGGTGGCCCACGCACCAGTACCATGCAAGTTAATCAGTACAACATCGGCAATGAACAGGATGCCGCACAGAAATTTGATCCGGGCACGATTCGTCTGTTGAGTAACCCGAACAAAGAGAACCGCATGGGCAATCCGGTTTCCTATCAAATTATTCCTTATGCAGGTGGTACTCACCCGGTAGCAAAAGGTGCCCAGTTCGCGCCGGACGAGTGGATCTATCATCGTTTAAGCTTTATGGACAAGCAGCTCTGGGTAACGCGTTATCATCCTGGCGAGCGTTTCCCGGAAGGCAAATATCCGAACCGTTCTACTCATGACACCGGTCTTGGACAATACAGTAAGGATAACGAGTCGCTGGACAACACCGACGCCGTTGTCTGGATGACCACCGGCACCACACATGTGGCCCGCGCCGAAGAGTGGCCGATTATGCCGACCGAATGGGTACATACTCTGCTGAAACCATGGAACTTCTTTGACGAAACGCCAACGCTAGGGGCGCTGAAGAAAGATAAGTGA", + "dna_sequence_length": 2274, + "functions": [ + "tyramine oxidase, copper-requiring" + ], + "id": "CDS_1374", + "location": [ + [ + "NC_000913", + 1451349, + "-", + 2274 + ] + ], + "md5": "c492700ef25f4911c05101230dca8ca9", + "parent_gene": "", + "protein_md5": "d63f3c8eb62c129a1cba353e46276d06", + "protein_translation": "MGSPSLYSARKTTLALAVALSFAWQAPVFAHGGEAHMVPMDKTLKEFGADVQWDDYAQLFTLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSDTFINDVFQSGLDQTFQVEKRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTARPFDGRDRVAPAVKPMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWISTVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNFFDETPTLGALKKDK", + "protein_translation_length": 757, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004644" + ], + [ + "gene_synonym", + "ECK1384" + ], + [ + "gene_synonym", + "EcoGene:EG13735" + ], + [ + "gene_synonym", + "GI:16129348" + ], + [ + "gene_synonym", + "GeneID:945954" + ], + [ + "gene_synonym", + "JW1382" + ], + [ + "gene_synonym", + "NP_415905.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77455" + ], + [ + "gene_synonym", + "b1387" + ], + [ + "gene_synonym", + "maoC" + ], + [ + "gene_synonym", + "paaZ" + ], + [ + "gene_synonym", + "tynP?" + ], + [ + "gene_synonym", + "ydbN" + ] + ], + "dna_sequence": "ATGCAGCAGTTAGCCAGTTTCTTATCCGGTACCTGGCAGTCTGGCCGGGGCCGTAGCCGTTTGATTCACCACGCTATTAGCGGCGAGGCGTTATGGGAAGTGACCAGTGAAGGTCTTGATATGGCGGCTGCCCGCCAGTTTGCCATTGAAAAAGGTGCCCCCGCCCTTCGCGCTATGACCTTTATCGAACGTGCGGCGATGCTTAAAGCGGTCGCTAAACATCTGCTGAGTGAAAAAGAGCGTTTCTATGCTCTTTCTGCGCAAACAGGCGCAACGCGGGCAGACAGTTGGGTTGATATTGAAGGTGGCATTGGGACGTTATTTACTTACGCCAGCCTCGGTAGCCGGGAGCTGCCTGACGATACGCTGTGGCCGGAAGATGAATTGATCCCCTTATCGAAAGAAGGTGGATTTGCCGCGCGCCATTTACTGACCTCAAAGTCAGGCGTGGCAGTGCATATTAACGCCTTTAACTTCCCCTGCTGGGGAATGCTGGAAAAGCTGGCACCAACGTGGCTGGGCGGAATGCCAGCCATCATCAAACCAGCTACCGCGACGGCCCAACTGACTCAGGCGATGGTGAAATCAATTGTCGATAGTGGTCTTGTTCCCGAAGGCGCAATTAGTCTGATCTGCGGTAGTGCTGGCGACTTGTTGGATCATCTGGACAGCCAGGATGTGGTGACTTTCACGGGGTCAGCGGCGACCGGACAGATGCTGCGAGTTCAGCCAAATATCGTCGCCAAATCTATCCCCTTCACTATGGAAGCTGATTCCCTGAACTGCTGCGTACTGGGCGAAGATGTCACCCCGGATCAACCGGAGTTTGCGCTGTTTATTCGTGAAGTTGTGCGTGAGATGACCACAAAAGCCGGGCAAAAATGTACGGCAATCCGGCGGATTATTGTGCCGCAGGCATTGGTTAATGCTGTCAGTGATGCTCTGGTTGCGCGATTACAGAAAGTCGTGGTCGGTGATCCTGCTCAGGAAGGCGTGAAAATGGGCGCACTGGTAAATGCTGAGCAGCGTGCCGATGTGCAGGAAAAAGTGAACATATTGCTGGCTGCAGGATGCGAGATTCGCCTCGGTGGTCAGGCGGATTTATCTGCTGCGGGTGCCTTCTTCCCGCCAACCTTATTGTACTGTCCGCAGCCGGATGAAACACCGGCGGTACATGCAACAGAAGCCTTTGGCCCTGTCGCAACGCTGATGCCAGCACAAAACCAGCGACATGCTCTGCAACTGGCTTGTGCAGGCGGCGGTAGCCTTGCGGGAACGCTGGTGACGGCTGATCCGCAAATTGCGCGTCAGTTTATTGCCGACGCGGCACGTACGCATGGGCGAATTCAGATCCTCAATGAAGAGTCGGCAAAAGAATCCACCGGGCATGGCTCCCCACTGCCACAACTGGTACATGGTGGGCCTGGTCGCGCAGGAGGCGGTGAAGAATTAGGCGGTTTACGAGCGGTGAAACATTACATGCAGCGAACCGCTGTTCAGGGTAGTCCGACGATGCTTGCCGCTATCAGTAAACAGTGGGTGCGCGGTGCGAAAGTCGAAGAAGATCGTATTCATCCGTTCCGCAAATATTTTGAGGAGCTACAACCAGGCGACAGCCTGTTGACTCCCCGCCGCACAATGACAGAGGCCGATATTGTTAACTTTGCTTGCCTCAGCGGCGATCATTTCTATGCACATATGGATAAGATTGCTGCTGCCGAATCTATTTTCGGTGAGCGGGTGGTGCATGGGTATTTTGTGCTTTCTGCGGCTGCGGGTCTGTTTGTCGATGCCGGTGTCGGTCCGGTCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAA", + "dna_sequence_length": 2046, + "functions": [ + "oxepin-CoA hydrolase and 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase" + ], + "id": "CDS_1375", + "location": [ + [ + "NC_000913", + 1453642, + "-", + 2046 + ] + ], + "md5": "5d5dff69878f41e97a570abe57282db8", + "parent_gene": "", + "protein_md5": "07355f73ff4b7e4378d08f01dba10a2f", + "protein_translation": "MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAARQFAIEKGAPALRAMTFIERAAMLKAVAKHLLSEKERFYALSAQTGATRADSWVDIEGGIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINAFNFPCWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDLLDHLDSQDVVTFTGSAATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEFALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSDALVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKVNILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPAVHATEAFGPVATLMPAQNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQILNEESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRAVKHYMQRTAVQGSPTMLAAISKQWVRGAKVEEDRIHPFRKYFEELQPGDSLLTPRRTMTEADIVNFACLSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTIQVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQHQTPVALYSILTLVARQHGDFVD", + "protein_translation_length": 681, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004649" + ], + [ + "gene_synonym", + "ECK1385" + ], + [ + "gene_synonym", + "EcoGene:EG13736" + ], + [ + "gene_synonym", + "GI:16129349" + ], + [ + "gene_synonym", + "GeneID:945833" + ], + [ + "gene_synonym", + "JW1383" + ], + [ + "gene_synonym", + "NP_415906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76077" + ], + [ + "gene_synonym", + "b1388" + ], + [ + "gene_synonym", + "paaA" + ], + [ + "gene_synonym", + "ydbO" + ] + ], + "dna_sequence": "GTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGATCACTCGCGCACCAACCTTGCGGCGTAAAGCCATTCTGTTGGCCAAAGTGCAGGATGAAGCCGGTCATGGTCTGTATCTCTATAGCGCCGCCGAAACACTGGGCTGCGCCAGAGAAGACATCTACCAAAAAATGCTCGACGGACGGATGAAATATTCCTCCATCTTTAATTATCCGACATTGAGTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGTATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGCAGCGAAGCTCAAAAGCAGATGTTGCAAGACGCCATTAACCGTTTCTGGTGGCCAGCCTTAATGATGTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGTTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTAAAGCCTGGGAAGAAGGTACCTGGGTACGGGAAGCAGCGCTGGCCCATGCACAAAAACAACATGCCCGTAAGGTCGCATAA", + "dna_sequence_length": 930, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1376", + "location": [ + [ + "NC_000913", + 1453927, + "+", + 930 + ] + ], + "md5": "75ba47687840359c3572da28671e5da6", + "parent_gene": "", + "protein_md5": "a98a5e41f3db9b4d8241ad4b00886036", + "protein_translation": "MTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTWVREAALAHAQKQHARKVA", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004651" + ], + [ + "gene_synonym", + "ECK1386" + ], + [ + "gene_synonym", + "EcoGene:EG14299" + ], + [ + "gene_synonym", + "GI:16129350" + ], + [ + "gene_synonym", + "GeneID:947595" + ], + [ + "gene_synonym", + "JW1384" + ], + [ + "gene_synonym", + "NP_415907.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76078" + ], + [ + "gene_synonym", + "b1389" + ], + [ + "gene_synonym", + "paaB" + ], + [ + "gene_synonym", + "ynbF" + ] + ], + "dna_sequence": "ATGAGTAATGTTTACTGGCCGTTATACGAAGTTTTCGTGCGTGGCAAACAGGGCTTATCACACCGCCATGTTGGCAGTTTACATGCTGCCGATGAGCGGATGGCACTGGAAAATGCCCGTGATGCTTACACCCGTCGTAGCGAAGGATGTTCAATTTGGGTGGTGAAGGCGAGTGAAATTGTTGCCTCGCAACCGGAAGAACGCGGTGAATTTTTTGATCCGGCTGAAAGCAAGGTCTATCGCCATCCAACGTTTTACACCATCCCTGATGGCATTGAGCACATGTGA", + "dna_sequence_length": 288, + "functions": [ + "putative ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1377", + "location": [ + [ + "NC_000913", + 1454868, + "+", + 288 + ] + ], + "md5": "f751cd33d0606976eb0b27e371dd3d7d", + "parent_gene": "", + "protein_md5": "c46fa3a8e8b8da6113ee7ab3c800f68d", + "protein_translation": "MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004653" + ], + [ + "gene_synonym", + "ECK1387" + ], + [ + "gene_synonym", + "EcoGene:EG13737" + ], + [ + "gene_synonym", + "GI:16129351" + ], + [ + "gene_synonym", + "GeneID:945956" + ], + [ + "gene_synonym", + "JW1385" + ], + [ + "gene_synonym", + "NP_415908.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76079" + ], + [ + "gene_synonym", + "b1390" + ], + [ + "gene_synonym", + "paaC" + ], + [ + "gene_synonym", + "ydbP" + ] + ], + "dna_sequence": "ATGAATCAGTTAACGGCTTACACCTTGCGCCTGGGCGATAACTGCCTGGTGCTCTCCCAGCGGTTGGGTGAATGGTGCGGTCACGCACCGGAACTGGAAATCGATCTCGCACTGGCAAACATTGGCCTCGATTTATTAGGTCAGGCACGCAACTTCTTATCGTATGCCGCTGAATTAGCGGGAGAAGGCGATGAAGATACCCTGGCCTTCACCCGAGACGAGCGCCAGTTCAGCAACTTATTGTTGGTTGAACAACCAAACGGCAATTTTGCCGACACCATTGCACGCCAGTATTTCATCGATGCATGGCATGTGGCGCTCTTTACCCGTCTGATGGAAAGCCGTGATCCGCAACTGGCGGCGATTTCTGCCAAAGCAATTAAAGAAGCGCGCTATCACCTGCGTTTTAGTCGTGGCTGGCTGGAGCGACTGGGCAATGGTACTGACGTATCAGGGCAAAAGATGCAGCAGGCCATCAACAAGTTGTGGCGTTTTACCGCCGAACTGTTCGATGCCGACGAGATTGATATTGCACTGAGTGAAGAGGGTATTGCGGTTGATCCACGCACTTTACGCGCAGCGTGGGAAGCCGAAGTTTTTGCCGGGATCAACGAAGCCACATTGAACGTACCGCAAGAGCAGGCGTATCGCACTGGCGGTAAAAAAGGACTGCATACCGAACACCTTGGACCCATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAATGGTAA", + "dna_sequence_length": 747, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1378", + "location": [ + [ + "NC_000913", + 1455164, + "+", + 747 + ] + ], + "md5": "1e7f96f141b71f3a1d5a79eec1969aa4", + "parent_gene": "", + "protein_md5": "ff03f8165dfba10e5c8adf9b932ddb24", + "protein_translation": "MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRTGGKKGLHTEHLGPMLAEMQYLQRVLPGQQW", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004655" + ], + [ + "gene_synonym", + "ECK1388" + ], + [ + "gene_synonym", + "EcoGene:EG13738" + ], + [ + "gene_synonym", + "GI:226524712" + ], + [ + "gene_synonym", + "GeneID:945959" + ], + [ + "gene_synonym", + "JW5217" + ], + [ + "gene_synonym", + "NP_415909.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76080" + ], + [ + "gene_synonym", + "b1391" + ], + [ + "gene_synonym", + "paaD" + ], + [ + "gene_synonym", + "ydbQ" + ] + ], + "dna_sequence": "ATGCAACGTCTGGCCACCATTGCACCGCCACAGGTTCATGAGATATGGGCGCTACTCAGCCAGATCCCGGACCCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCAACGGGTTTACCCCCGTTCAGGTTGTGCTGCAACTCGACCCGGCATGGACCACCGACTGGATGACCCCCGATGCCCGTGAGCGTCTGCGAGAGTATGGCATTAGCCCGCCCGCCGGACACAGTTGCCATGCCCATTTGCCGCCAGAAGTACGTTGCCCGCGCTGCGCCAGCGTCCATACCACACTTATCAGTGAATTTGGTTCCACGGCCTGCAAAGCATTGTACCGCTGCGATAGTTGCCGCGAACCTTTCGATTATTTCAAATGTATTTGA", + "dna_sequence_length": 498, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1379", + "location": [ + [ + "NC_000913", + 1455925, + "+", + 498 + ] + ], + "md5": "a4dffa772c518452a8efcdd82cdfce2a", + "parent_gene": "", + "protein_md5": "dd2f272e4c07d2e5c190093f163c8329", + "protein_translation": "MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTPVQVVLQLDPAWTTDWMTPDARERLREYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004657" + ], + [ + "gene_synonym", + "ECK1389" + ], + [ + "gene_synonym", + "EcoGene:EG13739" + ], + [ + "gene_synonym", + "GI:16129353" + ], + [ + "gene_synonym", + "GeneID:945962" + ], + [ + "gene_synonym", + "JW1387" + ], + [ + "gene_synonym", + "NP_415910.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76081" + ], + [ + "gene_synonym", + "b1392" + ], + [ + "gene_synonym", + "paaE" + ], + [ + "gene_synonym", + "ydbR" + ] + ], + "dna_sequence": "ATGACAACGTTTCATTCCTTAACAGTGGCAAAAGTCGAGTCGGAAACCCGTGATGCGGTGACCATTACCTTTGCGGTGCCCCAGCCTTTGCAGGAGGCGTATCGCTTTCGCCCCGGTCAACATTTGACCTTAAAAGCCAGCTTTGATGGTGAAGAATTACGCCGTTGTTACTCCATTTGCCGCAGCTATCTGCCTGGCGAAATTAGTGTGGCGGTGAAAGCCATTGAAGGCGGACGTTTCTCCCGCTATGCCCGCGAACACATCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGCCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATACGCCTGGCACGCGCGTCAAACGTAGCGTTAACGTGCAAAGTGACGGACAAAAAGTGACTGTACGTCAGGATGGGCGGGATCGGGAAATCGTGCTTAATGCCGACGATGAAAGCATTCTCGATGCGGCATTGCGCCAGGGGGCGGATCTGCCCTATGCCTGCAAAGGCGGCGTCTGTGCGACCTGCAAATGCAAAGTGCTGCGTGGCAAAGTGGCGATGGAAACCAATTACAGTCTGGAACCGGATGAACTGGCCGCAGGTTATGTGTTGAGTTGCCAGGCACTGCCGCTGACCAGCGATGTGGTGGTTGACTTTGACGCGAAGGGGATGGCATGA", + "dna_sequence_length": 1071, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component" + ], + "id": "CDS_1380", + "location": [ + [ + "NC_000913", + 1456430, + "+", + 1071 + ] + ], + "md5": "39120c30a022a7bd02c7e67120b030f1", + "parent_gene": "", + "protein_md5": "85cb8ff0051ccca0f6416e5c7ea5dc28", + "protein_translation": "MTTFHSLTVAKVESETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004659" + ], + [ + "gene_synonym", + "ECK1390" + ], + [ + "gene_synonym", + "EcoGene:EG13740" + ], + [ + "gene_synonym", + "GI:16129354" + ], + [ + "gene_synonym", + "GeneID:946011" + ], + [ + "gene_synonym", + "JW1388" + ], + [ + "gene_synonym", + "NP_415911.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76082" + ], + [ + "gene_synonym", + "b1393" + ], + [ + "gene_synonym", + "paaF" + ], + [ + "gene_synonym", + "ydbR" + ] + ], + "dna_sequence": "ATGAGCGAACTGATCGTCAGCCGTCAGCAACGAGTATTGTTGCTGACCCTTAACCGTCCCGCCGCACGTAATGCGCTAAATAATGCCCTGCTGATGCAACTGGTAAATGAACTGGAAGCTGCGGCTACCGATACCAGCATTTCGGTCTGTGTGATTACCGGTAATGCACGCTTTTTTGCCGCTGGGGCCGATCTCAACGAAATGGCAGAAAAAGATCTCGCGGCCACCTTAAACGATACACGTCCGCAGCTATGGGCGCGATTGCAGGCCTTTAATAAACCACTTATCGCAGCCGTCAATGGTTACGCGCTTGGGGCGGGTTGCGAACTGGCATTGTTGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATGGTGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCAGTCGCAGGAAGTGGCTTTGCAAGCCGGACTTGCCCAGGAGCGACAGTTATTCACCTTGCTGGCGGCAACAGAAGATCGTCATGAAGGCATCTCCGCTTTCTTACAAAAACGCACGCCCGACTTTAAAGGACGCTAA", + "dna_sequence_length": 768, + "functions": [ + "2,3-dehydroadipyl-CoA hydratase" + ], + "id": "CDS_1381", + "location": [ + [ + "NC_000913", + 1457497, + "+", + 768 + ] + ], + "md5": "4ddf0b026dfc350716aa0d08a89dbfe8", + "parent_gene": "", + "protein_md5": "068abca323794bdfe8432b8d5ba266c3", + "protein_translation": "MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFKGR", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004661" + ], + [ + "gene_synonym", + "ECK1391" + ], + [ + "gene_synonym", + "EcoGene:EG13741" + ], + [ + "gene_synonym", + "GI:16129355" + ], + [ + "gene_synonym", + "GeneID:946263" + ], + [ + "gene_synonym", + "JW1389" + ], + [ + "gene_synonym", + "NP_415912.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77467" + ], + [ + "gene_synonym", + "b1394" + ], + [ + "gene_synonym", + "paaG" + ], + [ + "gene_synonym", + "ydbT" + ] + ], + "dna_sequence": "ATGATGGAATTCATCCTCAGTCATGTAGAAAAGGGCGTGATGACACTAACGCTCAACCGCCCGGAACGCCTGAACAGTTTTAATGATGAGATGCACGCACAACTGGCAGAGTGCCTGAAACAGGTCGAGCGCGACGACACTATCCGTTGCCTGTTACTTACAGGTGCCGGGCGCGGATTTTGTGCTGGTCAGGATCTTAACGATCGTAACGTTGATCCCACAGGCCCCGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACTGGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACAGCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCTAAACGCTCACCGCAGTTCACGGGGAAATAG", + "dna_sequence_length": 789, + "functions": [ + "1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming" + ], + "id": "CDS_1382", + "location": [ + [ + "NC_000913", + 1458264, + "+", + 789 + ] + ], + "md5": "2100a00365754321f780e343686e1e21", + "parent_gene": "", + "protein_md5": "9deb2dc4c08c65338389af1e760b8c04", + "protein_translation": "MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFTGK", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004663" + ], + [ + "gene_synonym", + "ECK1392" + ], + [ + "gene_synonym", + "EcoGene:EG13742" + ], + [ + "gene_synonym", + "GI:16129356" + ], + [ + "gene_synonym", + "GeneID:945940" + ], + [ + "gene_synonym", + "JW1390" + ], + [ + "gene_synonym", + "NP_415913.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76083" + ], + [ + "gene_synonym", + "b1395" + ], + [ + "gene_synonym", + "paaH" + ], + [ + "gene_synonym", + "ydbU" + ] + ], + "dna_sequence": "ATGATGATAAATGTGCAAACTGTGGCAGTGATTGGGAGCGGCACCATGGGGGCAGGCATTGCTGAAGTTGCTGCCAGTCATGGACACCAGGTTTTACTGTATGACATTTCTGCTGAAGCGCTGACCCGCGCAATCGACGGGATACACGCGCGGCTAAATTCACGCGTGACGCGGGGAAAACTGACTGCTGAAACCTGTGAACGCACATTGAAACGCCTGATCCCGGTGACCGATATTCACGCGCTGGCAGCTGCGGACCTGGTCATTGAAGCGGCGTCTGAACGTCTGGAAGTCAAAAAAGCGCTCTTTGCACAGCTGGCGGAAGTTTGCCCGCCACAAACGCTATTGACCACTAACACTTCGTCAATCTCTATAACCGCGATTGCTGCGGAGATAAAAAATCCTGAACGTGTTGCGGGGCTGCATTTTTTTAACCCGGCACCGGTGATGAAGTTGGTGGAGGTGGTCAGTGGGCTGGCAACGGCGGCGGAAGTTGTTGAGCAGTTGTGTGAACTAACGTTGAGTTGGGGTAAGCAGCCTGTGCGCTGTCATTCGACTCCTGGATTTATCGTTAACCGTGTTGCGCGTCCTTATTATTCCGAGGCCTGGCGGGCACTGGAAGAGCAGGTTGCTGCACCAGAAGTGATTGACGCTGCACTTCGCGATGGCGCTGGTTTCCCGATGGGGCCGCTGGAATTAACCGATCTGATTGGTCAGGACGTCAATTTTGCTGTCACCTGTTCGGTGTTTAACGCTTTCTGGCAGGAGCGTCGTTTTTTACCTTCGCTGGTGCAACAGGAACTGGTGATTGGTGGACGGTTGGGCAAGAAAAGTGGGCTGGGCGTGTACGACTGGCGCGCGGAACGTGAGGCAGTTGTTGGCCTGGAAGCGGTAAGCGACAGTTTTAGCCCAATGAAAGTAGAAAAGAAAAGTGACGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAACCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATACCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAA", + "dna_sequence_length": 1428, + "functions": [ + "3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent" + ], + "id": "CDS_1383", + "location": [ + [ + "NC_000913", + 1459054, + "+", + 1428 + ] + ], + "md5": "c83a7502398bd843deec6237c32b8a10", + "parent_gene": "", + "protein_md5": "8bcbf7af8761b1be1b79b0146227392c", + "protein_translation": "MMINVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNFAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLLIETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYES", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004666" + ], + [ + "gene_synonym", + "ECK1393" + ], + [ + "gene_synonym", + "EcoGene:EG13743" + ], + [ + "gene_synonym", + "GI:16129357" + ], + [ + "gene_synonym", + "GeneID:945265" + ], + [ + "gene_synonym", + "JW1391" + ], + [ + "gene_synonym", + "NP_415914.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76084" + ], + [ + "gene_synonym", + "b1396" + ], + [ + "gene_synonym", + "paaI" + ], + [ + "gene_synonym", + "ydbV" + ] + ], + "dna_sequence": "ATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGTAAATCTCACCGCATCGGCGGCACCATTACAGGAGAAGCCTGA", + "dna_sequence_length": 423, + "functions": [ + "hydroxyphenylacetyl-CoA thioesterase" + ], + "id": "CDS_1384", + "location": [ + [ + "NC_000913", + 1460471, + "+", + 423 + ] + ], + "md5": "9f9c94f59c1ec5403ca04477d3c0ed91", + "parent_gene": "", + "protein_md5": "697c3d0cb0d7d715ab250a6da9e952d0", + "protein_translation": "MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004668" + ], + [ + "gene_synonym", + "ECK1394" + ], + [ + "gene_synonym", + "EcoGene:EG13744" + ], + [ + "gene_synonym", + "GI:16129358" + ], + [ + "gene_synonym", + "GeneID:946121" + ], + [ + "gene_synonym", + "JW1392" + ], + [ + "gene_synonym", + "NP_415915.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C7L2" + ], + [ + "gene_synonym", + "b1397" + ], + [ + "gene_synonym", + "paaJ" + ], + [ + "gene_synonym", + "ydbW" + ] + ], + "dna_sequence": "ATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGTCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCTGCCGCAGAGTGTTTCCGGCACAACCATTAACCGCTTGTGTGGTTCCGGGCTGGACGCACTGGGGTTTGCCGCACGGGCGATTAAAGCGGGCGATGGCGATTTGCTGATCGCCGGTGGCGTGGAGTCAATGTCACGGGCACCGTTTGTTATGGGCAAGGCAGCCAGTGCATTTTCTCGTCAGGCTGAGATGTTCGATACCACTATTGGCTGGCGATTTGTGAACCCGCTCATGGCTCAGCAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCACGAGAAGATCAAGATAGTTTTGCGCTACGCAGTCAGCAACGTACGGCAAAAGCGCAATCCTCAGGCATTCTGGCTGAGGAGATTGTTCCGGTTGTGTTGAAAAACAAGAAAGGTGTTGTAACAGAAATACAACATGATGAGCATCTGCGCCCGGAAACGACGCTGGAACAGTTACGTGGGTTAAAAGCACCATTTCGTGCCAATGGGGTGATTACCGCAGGCAATGCTTCCGGGGTGAATGACGGAGCCGCTGCGTTGATTATTGCCAGTGAACAGATGGCAGCAGCGCAAGGACTGACACCGCGGGCGCGTATCGTAGCCATGGCAACCGCCGGGGTGGAACCGCGCCTGATGGGGCTTGGTCCGGTGCCTGCAACTCGCCGGGTGCTGGAACGCGCAGGGCTGAGTATTCACGATATGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGTGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGA", + "dna_sequence_length": 1206, + "functions": [ + "3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase" + ], + "id": "CDS_1385", + "location": [ + [ + "NC_000913", + 1460893, + "+", + 1206 + ] + ], + "md5": "42fbd6e1adf63ae8d5134ebeaad32df2", + "parent_gene": "", + "protein_md5": "023dd58ebc302d8263c2c576ec3597a9", + "protein_translation": "MREAFICDGIRTPIGRYGGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRARIVAMATAGVEPRLMGLGPVPATRRVLERAGLSIHDMDVIELNEAFAAQALGVLRELGLPDDAPHVNPNGGAIALGHPLGMSGARLALAASHELHRRNGRYALCTMCIGVGQGIAMILERV", + "protein_translation_length": 401, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004671" + ], + [ + "gene_synonym", + "ECK1395" + ], + [ + "gene_synonym", + "EcoGene:EG13745" + ], + [ + "gene_synonym", + "GI:16129359" + ], + [ + "gene_synonym", + "GeneID:945963" + ], + [ + "gene_synonym", + "JW5218" + ], + [ + "gene_synonym", + "NP_415916.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76085" + ], + [ + "gene_synonym", + "b1398" + ], + [ + "gene_synonym", + "paaK" + ] + ], + "dna_sequence": "ATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAACTTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGCCAATATTGTAGCGCGTTCTTTGCGTGCGGCAGGGGGCTCGCCCAAAGACAAAATTCATGTTGCCTATGGTTACGGCCTGTTTACTGGTGGGCTGGGTGCGCACTATGGTGCCGAACGTCTGGGCGCTACGGTGATCCCGATGTCTGGCGGGCAGACGGAAAAACAAGCGCAACTGATCCGTGATTTTCAACCAGATATGATCATGGTTACGCCATCTTATTGCCTTAACCTGATTGAAGAGCTGGAGCGGCAGTTGGGCGGTGATGCCAGCGGTTGCTCGCTGCGGGTTGGAGTATTTGGTGCTGAGCCGTGGACACAGGCCATGCGTAAAGAGATTGAGCGTCGCCTGGGGATCACCGCACTGGATATTTATGGCCTGTCAGAAGTGATGGGGCCGGGGGTGGCGATGGAGTGTCTGGAAACTACCGACGGCCCAACCATTTGGGAAGATCATTTCTATCCTGAAATTGTTAATCCTCATGACGGCACACCGCTTGCCGATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCACAACTGGAAGAAGAGATTGTCAAATTCGAACATTTATCGCCGCATTACCAACTGGAGGTGAACCGCCGGGGGCATCTTGATTCACTTTCTGTGAAAGTGGAGTTGAAAGAAAGTAGCCTGACATTGACGCATGAGCAGCGTTGCCAGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGA", + "dna_sequence_length": 1314, + "functions": [ + "phenylacetyl-CoA ligase" + ], + "id": "CDS_1386", + "location": [ + [ + "NC_000913", + 1462125, + "+", + 1314 + ] + ], + "md5": "baf6b63fbf92c225b3b1ba377c7fd508", + "parent_gene": "", + "protein_md5": "cac1c7cb751d4612e27d6f06714e6a46", + "protein_translation": "MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGSPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGLSEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPHDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA", + "protein_translation_length": 437, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004674" + ], + [ + "gene_synonym", + "ECK1396" + ], + [ + "gene_synonym", + "EcoGene:EG13746" + ], + [ + "gene_synonym", + "GI:16129360" + ], + [ + "gene_synonym", + "GeneID:945966" + ], + [ + "gene_synonym", + "JW1394" + ], + [ + "gene_synonym", + "NP_415917.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76086" + ], + [ + "gene_synonym", + "b1399" + ], + [ + "gene_synonym", + "paaX" + ], + [ + "gene_synonym", + "ydbY" + ] + ], + "dna_sequence": "ATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGATTCGCTTTCCCATCGTGGTGGTGAAATCTGGTTGGGTAGTCTGGCTGCTTTGCTGGAAGGGCTGGGATTTGGTGAGCGTTTCGTGCGCACCGCTTTGTTTCGTCTTAATAAAGAAGGCTGGCTGGATGTTTCCCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGCTTTTAAAAGAGGCGGCAGACGAGTTAACCCCGGAGCGGGCATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTGCTTCCGGCACACTGGGCAGGGCATACGGCGCGTCAGCTGTGTATCAACATTTATCAGCGCGTAGCGCCTGCTGCTTTAGCGTTCGTTAGTGAAAAAGGTGAAACCTCGGTCGGTGAACTGCCTGCGCCGGGAAGCCTGTATTTTCAACGTTTTGGCGGCTTGAATATTGAACAGGAGGCGTTATGCCAATTTATCAGATAG", + "dna_sequence_length": 951, + "functions": [ + "transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer" + ], + "id": "CDS_1387", + "location": [ + [ + "NC_000913", + 1463539, + "+", + 951 + ] + ], + "md5": "1fa398b58aba752d531855fb08091412", + "parent_gene": "", + "protein_md5": "70054024c316ccad1f86710ab6516372", + "protein_translation": "MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004676" + ], + [ + "gene_synonym", + "ECK1397" + ], + [ + "gene_synonym", + "EcoGene:EG13747" + ], + [ + "gene_synonym", + "GI:16129361" + ], + [ + "gene_synonym", + "GeneID:945965" + ], + [ + "gene_synonym", + "JW1395" + ], + [ + "gene_synonym", + "NP_415918.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77181" + ], + [ + "gene_synonym", + "b1400" + ], + [ + "gene_synonym", + "paaY" + ], + [ + "gene_synonym", + "ydbZ" + ] + ], + "dna_sequence": "ATGCCAATTTATCAGATAGACGGTCTGACTCCGGTTGTGCCAGAAGAGAGTTTTGTCCATCCGACAGCGGTATTGATCGGCGATGTTATTCTCGGCAAGGGCGTTTACGTTGGGCCAAATGCCAGCCTGCGTGGCGATTTTGGTCGTATCGTGGTGAAAGATGGCGCGAACATTCAGGATAATTGCGTTATGCACGGTTTTCCCGAGCAGGATACTGTTGTAGGAGAAGATGGACATATTGGTCATAGCGCTATCCTTCACGGCTGCATTATCCGCCGCAATGCATTAGTGGGAATGAACGCGGTAGTGATGGACGGTGCGGTGATTGGCGAGAACAGCATTGTTGGTGCATCCGCATTTGTGAAAGCCAAAGCAGAAATGCCAGCTAATTACCTGATTGTCGGCAGCCCGGCGAAAGCGATTCGTGAACTCAGTGAGCAGGAGTTGGCATGGAAAAAGCAGGGTACGCATGAGTACCAGGTGCTGGTGACACGCTGTAAGCAGACGTTACATCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAA", + "dna_sequence_length": 591, + "functions": [ + "thioesterase required for phenylacetic acid degradation", + "trimeric", + "phenylacetate regulatory and detoxification protein", + "hexapeptide repeat protein" + ], + "id": "CDS_1388", + "location": [ + [ + "NC_000913", + 1464471, + "+", + 591 + ] + ], + "md5": "44e2eb4c4864256614a2a85e6cfded11", + "parent_gene": "", + "protein_md5": "8d12e3b6884a8ed838c8d18491ec2317", + "protein_translation": "MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPKQ", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4489" + ], + [ + "gene_synonym", + "EcoGene:EG14479" + ], + [ + "gene_synonym", + "GI:226524713" + ], + [ + "gene_synonym", + "GeneID:7751614" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P600" + ], + [ + "gene_synonym", + "YP_002791240.1" + ], + [ + "gene_synonym", + "b4674" + ], + [ + "gene_synonym", + "ynbG" + ] + ], + "dna_sequence": "ATGAAATATATAAATTGTGTATATAATATAAATTACAAATTAAAACCACATTCTCATTATAAATAA", + "dna_sequence_length": 66, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1389", + "location": [ + [ + "NC_000913", + 1465230, + "-", + 66 + ] + ], + "md5": "cf39eab377a0da2b3e31fc7416485630", + "parent_gene": "", + "protein_md5": "0b49cb6558b97aea58066cbb482c6790", + "protein_translation": "MKYINCVYNINYKLKPHSHYK", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004680" + ], + [ + "gene_synonym", + "ASAP:ABE-0004694" + ], + [ + "gene_synonym", + "ASAP:ABE-0285093" + ], + [ + "gene_synonym", + "ECK1398" + ], + [ + "gene_synonym", + "EcoGene:EG11307" + ], + [ + "gene_synonym", + "GeneID:2847750" + ], + [ + "gene_synonym", + "JW1402" + ], + [ + "gene_synonym", + "JW5802" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33666" + ], + [ + "gene_synonym", + "b4492" + ], + [ + "gene_synonym", + "ydbA" + ] + ], + "dna_sequence": "ATGCAAAGGAAAACTCTATTGTCGGCCTGTATTGCATTAGCTCTGAGTGGTCAGGGTTGGGCGGCAGATATCACAGAGGTAGAAACCACCACAGGTGAAAAGAAAAATACCAATGTGACTTGTCCGGCAGACCCAGGAAAACTCAGTCCGGAAGAGCTTAAACGCTTACCCTCTGAATGCTCTCCTTTAGTCGAACAAAACCTGATGCCATGGCTTTCCACAGGCGCTGCTGCGTTAATCACGGCCTTAGCCGTAGTGGAACTAAACGACGATGATGATCATCATCATCGCAACAATTCTCCACTCCCACCGACACCCCCTGATGATGAATCAGACGACACTCCAGTTCCCCCAACTCCTGGCGGAGATGAGATAATACCGGACGATCCGGATGATACGCCTACACCTCCCAAACCGGTTTCGTTTAATAATGACGTTATTCTCGATAAAACAGAAAAAACGTTAACTATTCGCGATTCAGTTTTTACTTATACCGAGAATGCTGACGGGACTATATCTCTGCAAGATAGCAATGGTCGTAAGGCAACGATTAATCTTTGGCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTGGCGTGCTCATCAACGGTGAGGGGGCAACAGTATCCAATACGGGTGATGTTAACGTTAGCAATGAAGCGACAGGGTTCAGCATCACAACCAACAGTGGGAAGGTTTCGCTGGCAGGCAGTATGCAGGTTGGCGATTTCTCGACCGGGGTAGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAGTAATTTATTTGATGGCAGCGCAGAGAAAACGTCAGGTCTGGTTGTGATTGGCGATGGCAATACCGTTAATATGAATGGTGGACTTGAACTGATTGGAGAGAAAAACGCGCTTGCAGATGGGTCGCAGGTTACTTCCTTGCGCACAGGATATAGTTATACCAGCGTTATTGTCGTTAGTGGTGAGTCGTCGGTATATCTGAATGGAGATACGACAATCAGCGGAGAATTCCCTCTGGGGTTTGCCGGGGTTATTCGGGTACAGGATAAAGCTTTGCTGGAAATTGGCAGTGGCGCTACGCTAACAATGCAGGATATTGACAGTTTTGAACATCATGGGACAAGAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGGAGCGCCACTAATGCAGGTACGATCACAGGTAAAGTGACGGAACAACATAGCGTATTTAACAAGTATTCAACGGGCACATCGAATTCATTTATTTTTAATAACGATGTCAGTAGCATAACAGGGTTAGTCGCTCAATCGAATAGCACAATTATCAATACTGACAGCGGCATCATTGATTTGTATGGTCGTGGTAGTGTCGGCATGCTTGCTATAGCAGATTCAACAGCAGAAAATCAGGGTAAAATTACACTGGATTCTATGTGGGTAGATGCAAATGACACTACCGCAATGCGAGATATAGCTAGCAACAGCGCCATTGACTTCGGTACAGGTGTGGGAGTTGGTACTGATAGTTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATAACGATGGCACAGGAACAATTGTTAACTATGGTACAATCTGCACTTTCGGCGTGTGCCAATCGGGGAATGAGTACAATAATACAGATGATTTCACCTCACTGATCTATACCGGTGGCGATACGATTACACGAAGCGGAGAAACTGTAACGCTAAATAAATCTGCTGCTGTGACTGATAAGCTGGCTGGGAATGTTGTTAATAGCGGAACGCTTTCCGGTGATCAAATTACGGTATCAAGCGGTCTTCTGGAAAATACCAGCGGTGGCATCATCAATAACTTAGTAAAACTTGACAAGGGTGCCGTCATTAAAAATGCCGGGGTGATGACGAATAACGTCGATGTTAGCGGTGGAATCCTCAATAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGGCGATTATGAGAGGTGCTGCGCTGACAGGTACTGCAGTGGCAAATAACGAAGGAACCTGGAACCTCGGAAGTAGTAGTGAGGGTAACAACACCGGGATGCTGGAAGTTAATAATAATTCAGCTTTCAATAACCGCGGCGAGTTTATTCTTGATAACGACAAGAATGCTGTGCACATCAACCAGTCCGGTACGCTTTATAATACCGGTCACATGAACATCAGTAATTCTTCCCACAACGGAGCCGTTAATATGTGGGGCGGAAATGGTCGTTTTATCAATGACGGAACGATTGATGTTTCTGCGAAGTCACTGGTAGTCAGCGCTAATAATGCCGGCGATCAGAATGCCTTCTTCTGGAACCAGGATAACGGGGTCATCAACTTCGATCACGACAGCGCCAGTGCCGTGAAAGTCACCCACAGCAACTTTATTGCCCAGAATGACGGCATCATGAACATCAGCGGCACCGGTGCTGTGGCTATGGAAGGTGATAAGAACGCGCAGCTGGTTAACAATGGCACCATCAACCTCGGTACCGCAGGCACTACTGACACGGGTATGATCGGTATGCAACTCGATGCCAACGCCACGGCGGATGCGGTAATCGAAAACAACGGCACCATCAATATCTTCGCCAATGACTCGTTTGCATTTAGCGTACTGGGTACAGTAGGTCATGTGGTTAACAACGGCACGGTGGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAGCACCGATGCCAGCGGTAACGTTGACGTCACCATGAGCAAAAATGCCTACACCGATGTGGCAACAGATGCCTCGGTGAATGACATCGCGAAAGCACTGGATGCGGGTTACACCAACAACGAACTGTTTACCAGCCTGAACGTCGGCACGACTGCTGAACTGAACAGTGCTCTGAAACAGGTCAGCGGTAGCCAGGCGACCACGGTATTCCGCGAAGCGCGCGTGTTAAGCAACCGCTTTAGTATGCTGGCAGATGCCGCGCCGAAAGTGGGTAACGGTCTGGCGTTCAACGTTGTCGCGAAAGGCGATCCGCGTGCCGAGTTAGGTAATAATACCGAATACGACATGCTGGCATTGCGTAAAACTATCGACCTGAGCGAAAGCCAGACGATGAGTCTGGAGTACGGTATCGCTCGTCTCGATGGTGATGGTGCGCAGAAAGCGGGTGATAATGGCGTTACAGGCGGTTATAGCCAGTTTTTTGGCCTGAAACATCAGATGTCGTTCGATAACGGCATGAACTGGAATAACGCCTTGCGTTACGACGTTCACAACCTTGACAGCAGCCGCTCGATTGCATTTGGCAACACGAACAAAACGGCTGATACCGACGTGAAACAGCAGTACCTGGAGTTCCGCAGCGAAGGGGCGAAGACTTTCGAACCGAGCGAAGGACTGAAGGTTACGCCATATGCGGGTGTAAAACTGCGTCACACACTGGAAGGTGGCTATCAGGAGCGCAATGCCGGAGACTTTAACCTGAATATGAACAGTGGCAGCGAAACGGCGGTGGACAGCATCGTCGGGCTGAAACTGGACTACGCAGGTAAAGACGGCTGGAGCGCTAGCGCTACGCTGGAAGGCGGGCCGAACCTGAGCTACGCGAAGAGCCAGCGTACGGCAAGCCTGGCAGGCGCAGGCAGTCAGCACTTTAACGTCGATGACGGTCAGAAGGGCGGCGGCATCAATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAA", + "dna_sequence_length": 6063, + "id": "CDS_1390", + "location": [ + [ + "NC_000913", + 1465392, + "+", + 2513 + ], + [ + "NC_000913", + 1469241, + "+", + 53 + ], + [ + "NC_000913", + 1470517, + "+", + 3497 + ] + ], + "md5": "e272175196382e89cb721c1264f40e1a", + "parent_gene": "", + "protein_md5": "66e75799b3e258eb1eef06e96b239148", + "protein_translation": "MQRKTLLSACIALALSGQGWAADITEVETTTGEKKNTNVTCPADPGKLSPEELKRLPSECSPLVEQNLMPWLSTGAAALITALAVVELNDDDDHHHRNNSPLPPTPPDDESDDTPVPPTPGGDEIIPDDPDDTPTPPKPVSFNNDVILDKTEKTLTIRDSVFTYTENADGTISLQDSNGRKATINLWQIDEANNTVALEGVSADGATKWQYNHNGELVITGDNATVNNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESMGIQIDGDKAIVNNEGESTITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQVDGDQAVVNNEGESAITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEIAGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQIDGDQAIVNNEGESTITNGGTGTQINGNDATANNSGKTTVDGKDSTGTKIAGNIGIVNLDGSLTVTGGAHGVENIGDNGTVNNKGDIVVSDTGSIGVLINGEGATVSNTGDVNVSNEATGFSITTNSGKVSLAGSMQVGDFSTGVDLNGNNNSVTLAAKDLKVVGQKATGINVSGDANTVNITGNVLVDKDKTADNAAEYFFDPSVGINVYGSDNNVTLDGKLTVVSDSEVTSRQSNLFDGSAEKTSGLVVIGDGNTVNMNGGLELIGEKNALADGSQVTSLRTGYSYTSVIVVSGESSVYLNGDTTISGEFPLGFAGVIRVQDKALLEIGSGATLTMQDIDSFEHHGTRTPELTYADSGAKIVNKGTVEIQNLGFAFVTGENTTGINSGTISLLQNGKDPAPSPIVLLATNGGSATNAGTITGKVTEQHSVFNKYSTGTSNSFIFNNDVSSITGLVAQSNSTIINTDSGIIDLYGRGSVGMLAIADSTAENQGKITLDSMWVDANDTTAMRDIASNSAIDFGTGVGVGTDSYSGAGKNATAINQLGGVITIYNAGAGMAAYGASNTVINQGTINLEKNGNYDDSLAANTLVGMAVYEHGTAINDQTGVININVGTGQAFYNDGTGTIVNYGTICTFGVCQSGNEYNNTDDFTSLIYTGGDTITRSGETVTLNKSAAVTDKLAGNVVNSGTLSGDQITVSSGLLENTSGGIINNLVKLDKGAVIKNAGVMTNNVDVSGGILNNAGEMTAQITMNAGADSSLVNNTGTINKIVQNAGVFNNSGSVTGRMMSAGGVFNNQTDGAIMRGAALTGTAVANNEGTWNLGSSSEGNNTGMLEVNNNSAFNNRGEFILDNDKNAVHINQSGTLYNTGHMNISNSSHNGAVNMWGGNGRFINDGTIDVSAKSLVVSANNAGDQNAFFWNQDNGVINFDHDSASAVKVTHSNFIAQNDGIMNISGTGAVAMEGDKNAQLVNNGTINLGTAGTTDTGMIGMQLDANATADAVIENNGTINIFANDSFAFSVLGTVGHVVNNGTVVIADGVTGSGLIKQGDSINVEGMNGNNGNSSEVHYGDYTLPDVPKPNTVSVTSGSDEAGGSMNNLNGYVVGTNVNGSAGKLKVNNASMNGVEINTGFTAGTADTTVSFDNVVEGSNLTDADAITSTSVVWTAKGSTDASGNVDVTMSKNAYTDVATDASVNDIAKALDAGYTNNELFTSLNVGTTAELNSALKQVSGSQATTVFREARVLSNRFSMLADAAPKVGNGLAFNVVAKGDPRAELGNNTEYDMLALRKTIDLSESQTMSLEYGIARLDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQERNAGDFNLNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYSSKESSLNLDAYNWKEDGISDKGVMLNFKKTF", + "protein_translation_length": 2020, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004683" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16129363" + ], + [ + "gene_synonym", + "GeneID:945952" + ], + [ + "gene_synonym", + "NP_415920.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF54" + ], + [ + "gene_synonym", + "b1402" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_1391", + "location": [ + [ + "NC_000913", + 1468826, + "-", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004685" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698254" + ], + [ + "gene_synonym", + "GeneID:945967" + ], + [ + "gene_synonym", + "NP_415921.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF41" + ], + [ + "gene_synonym", + "b1403" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_1392", + "location": [ + [ + "NC_000913", + 1469149, + "-", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004691" + ], + [ + "gene_synonym", + "ECK0258" + ], + [ + "gene_synonym", + "EcoGene:EG40009" + ], + [ + "gene_synonym", + "GI:16129365" + ], + [ + "gene_synonym", + "GeneID:945968" + ], + [ + "gene_synonym", + "NP_415922.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF89" + ], + [ + "gene_synonym", + "b1404" + ], + [ + "gene_synonym", + "insI1" + ] + ], + "dna_sequence": "ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGCGGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATAGCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGTTGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGCTTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAAACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACAGCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTAGGGCATTGGGAGGGCGATTTAGTCTCAGGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", + "dna_sequence_length": 1152, + "functions": [ + "IS30 transposase" + ], + "id": "CDS_1393", + "location": [ + [ + "NC_000913", + 1469358, + "+", + 1152 + ] + ], + "md5": "ec0d30272e812b24142e8fb5ab3917b7", + "parent_gene": "", + "protein_md5": "29e5a3b611b13a57961d86c92192eefc", + "protein_translation": "MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004698" + ], + [ + "gene_synonym", + "ECK1399" + ], + [ + "gene_synonym", + "EcoGene:EG11309" + ], + [ + "gene_synonym", + "GI:16129367" + ], + [ + "gene_synonym", + "GeneID:945980" + ], + [ + "gene_synonym", + "JW1403" + ], + [ + "gene_synonym", + "NP_415924.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25906" + ], + [ + "gene_synonym", + "b1406" + ], + [ + "gene_synonym", + "ydbC" + ] + ], + "dna_sequence": "ATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTGGTGCGCGGCGTGGAGAGGACGCATCCTGGTTGCCCGCATTTTCTCCGGCAGAGCTGCAAAAAGCGGTGCACGATAATCTACGTAATCTCGGGCTGGACGTGCTGGATGTGGTTAACCTGCGCGTTATGATGGGGGATGGTCATGGCCCAGCGGAAGGATCGATTGAGGCCAGCCTGACCGTGCTGGCAGAGATGCAACAACAAGGCCTGGTAAAACATATTGGCCTGAGCAACGTCACACCGACGCAGGTTGCAGAGGCGCGCAAGATTGCCGAAATTGTCTGTGTGCAAAACGAATACAACATCGCGCACCGTGCTGATGATGCAATGATTGATGCTTTGGCCCACGATGGCATTGCCTACGTGCCGTTCTTCCCGCTCGGGGGCTTTACACCGCTGCAATCGTCCACACTTTCCGATGTTGCTGCGAGCCTGGGTGCAACACCAATGCAGGTGGCGCTGGCGTGGCTGTTACAGCGTTCACCGAATATTTTGCTGATCCCAGGGACGTCTTCGGTTGCGCATTTACGGGAGAATATGGCTGCTGAAAAATTGCATCTTTCTGAGGAAGTGTTGTCTACGTTGGATGGTATTTCGCGAGAATAA", + "dna_sequence_length": 861, + "functions": [ + "putative NAD(P)-binding oxidoreductase" + ], + "id": "CDS_1394", + "location": [ + [ + "NC_000913", + 1474221, + "+", + 861 + ] + ], + "md5": "f79cb691e2c19afdb5c0ffb31f2b6c89", + "parent_gene": "", + "protein_md5": "485cf2bd21128fd8bcaeb37bdeda982a", + "protein_translation": "MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004701" + ], + [ + "gene_synonym", + "ECK1400" + ], + [ + "gene_synonym", + "EcoGene:EG11310" + ], + [ + "gene_synonym", + "GI:90111266" + ], + [ + "gene_synonym", + "GeneID:945983" + ], + [ + "gene_synonym", + "JW5221" + ], + [ + "gene_synonym", + "NP_415925.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25907" + ], + [ + "gene_synonym", + "b1407" + ], + [ + "gene_synonym", + "ydbD" + ] + ], + "dna_sequence": "ATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTGCCCCTGTTTATGCTGAGTCTACCAGTACAGGCGGAACTTCGATGTGTTGCAAATGCAGTTGATATTGAATCATTTTTTTCTGCGGCTACCGCTGAAGATAAACAACAAGTTGAACAAGCTATCAACAGTAGCGTGAATCTTGTCCCCTTCGGTTTATCTGCATCGAACTGGAAAGTGCATCGTGGCGATTTAGTGGTAGAAGGTAATATAGAGAGTAATCAAAAATTGATTGTTCTTGGGAATTTGACAGTCAAAGGTAATATTTCCACTTTCTCTCTTTCTAATCCATGGGTTATTCTCGGTAACGTGACGGCAACGAATATAGTTGCGGATTCACCACTGTTAATTACCGGTTCGATAAATGCAAGTGGACTGGTATTTATCGACTCATATTACGATAATCCGTCTACGATTAAGGGGAGTATTAATGCGCGTGGGATATTTATCAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCGCATGGCAGGGAATGTCTGTAATCAGATGAAAAAAGAAGCGCTGTTTCGCCCTAAGCCTTCTCCTGAGTTAGTGCAAGAATTGCAAATGCTGGATGAAGGCAAAGTTGCTGCATTTGAAGGACGAGACATTGCGACATTTGATCTTGCCGTAATGCGAACTCTCCCAAGGCTTAAAGGAATTTCAGCTAACCTACGCAAACAACTTATTAATAGCAATGATGAACAAACGATTGAAAGTATGGCGAGATATATGCCTGACAATGAGATTCTGGAGTTGACCGATCAGCAATTGGGTTACCAGCCTGTTGTTCTGGGGTTGCTCGACCGTGAACCGCTCTCTGTCGAAATAATGACGCGAATGAGTCGTCTACCTGATGGTGTCGGTCCGTTGAATCTTGCGCTACGTGAAAATCTCCCTCTGGATATCGTCATGACTCTGGCGAAAAGAGATTGGGATATGATCATTCAGGAGCTTTATAAAGATGCGTGGTTATTGCCTGAATCCATTATTGATGGCTATATCCGCAGTGATGATTCCTCTATTCGTCAGGTCGGTGCTGGAGGACAACTCACCTACAATCAGGCAATGCAGTTGGCGAACGATTCATCAAACAATGTTGTCACAAGCTTAGCGTTCAAGCTGGCAGAGATGAAACACCATGGTCAATTGTTGCGGATGACGCCACAAGAGAGTGACAAAGTTGCAGGCTATTTATACCAAAAATTCGAGAATGACGATGATCTAATACGTGTGTTATTTTTAGCATTGCCAGATAACTTACAGTTTAATTTTGTTAAAAGGATGGAGAAAAAATCCCCGGCCTACTTTTGCTGTCGGGATATGCAGGTAATTCACTCTGACGCTGCTTTACAACGGTTATTGACACGTTTCAACGATCCTGAAGGGTGGAGTAATCTGGCGAAAAATCAGTATCTGAGCACGTCGATGAAACAAAAAATTTGGCAACGTGCTTTATCGCATCGGAAAAATAATCCGAAAGCAGATTCAGATGCATATGAAACCAGCGCTGATATGATTTTGTCTGAGCTGATTAGCCACGGCGAAGTTGATGACCAGATGCTATTAAATGCCACCGCCCTGATACGTTCGGACGACTGGGACTTTTTAGAGAGTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGCGTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAAACAACCGGATCGTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTTCGGCGCACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGA", + "dna_sequence_length": 2307, + "functions": [ + "PF10971 family putative periplasmic methylglyoxal resistance protein" + ], + "id": "CDS_1395", + "location": [ + [ + "NC_000913", + 1475144, + "+", + 2307 + ] + ], + "md5": "a21a8a585df187114cccef9314dc1b95", + "parent_gene": "", + "protein_md5": "b830d9c98e3b64359614205f9291ce01", + "protein_translation": "MLKARNCGWIRLLPLFMLSLPVQAELRCVANAVDIESFFSAATAEDKQQVEQAINSSVNLVPFGLSASNWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNISTFSLSNPWVILGNVTATNIVADSPLLITGSINASGLVFIDSYYDNPSTIKGSINARGIFINDIIAPVVASSTNSEFMVRASDKHDTENVKKALMIINPDAYYWGLINDEDALKEIFKRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGKVAAFEGRDIATFDLAVMRTLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDREPLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPESIIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLLRMTPQESDKVAGYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQVIHSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALSHRKNNPKADSDAYETSADMILSELISHGEVDDQMLLNATALIRSDDWDFLESALISWDNLPAVVLKELQQNTPRNDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNLTFFKFGALNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPELDLVRQLALNGKTRAIREQAMRKLDELY", + "protein_translation_length": 768, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004704" + ], + [ + "gene_synonym", + "ECK1401" + ], + [ + "gene_synonym", + "EcoGene:EG13748" + ], + [ + "gene_synonym", + "GI:90111267" + ], + [ + "gene_synonym", + "GeneID:945973" + ], + [ + "gene_synonym", + "JW1405" + ], + [ + "gene_synonym", + "NP_415926.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76090" + ], + [ + "gene_synonym", + "b1408" + ], + [ + "gene_synonym", + "ynbA" + ] + ], + "dna_sequence": "ATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACATCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGCTTTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGCCGGTCCATTTGGCAAAAGCGATCGCGCGTTAATATTTGGTCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAA", + "dna_sequence_length": 606, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1396", + "location": [ + [ + "NC_000913", + 1477621, + "+", + 606 + ] + ], + "md5": "fb4a898c463c0e330b8b6f93842b23f6", + "parent_gene": "", + "protein_md5": "8776f6f0734e8e4da3d5838d71d3e3b6", + "protein_translation": "MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004706" + ], + [ + "gene_synonym", + "ECK1402" + ], + [ + "gene_synonym", + "EcoGene:EG13749" + ], + [ + "gene_synonym", + "GI:16129370" + ], + [ + "gene_synonym", + "GeneID:945972" + ], + [ + "gene_synonym", + "JW1406" + ], + [ + "gene_synonym", + "NP_415927.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76091" + ], + [ + "gene_synonym", + "b1409" + ], + [ + "gene_synonym", + "ynbB" + ] + ], + "dna_sequence": "ATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGGTTACCGGAGAGAAAAGGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTGTTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTGGCTGGGTTTCTGATATTAGCCACCGGGCAAGTTTTAGTGGGTGACCCCTCTGGTTTTCTGCATACCGTGAGCGCCATTTTTTGGGGCTGGATAATGACCGTTTTCGCCTTGAGTCATGCCGCCTGGTTATTAATGTTGCCAACCACAAATATCCAGGGCGGGGCGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTACTGACACCGCTAAATACATTACAGGCATTATTAGCGGGTTTGTTAATTGGTATTAGTGGTTTTTGCGGCGATGTCGTGATGTCAGCCATCAAACGAGATATTGGTGTTAAAGATAGCGGAAAACTATTGCCAGGACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACGCTACTGCTGTTACTGA", + "dna_sequence_length": 897, + "functions": [ + "putative CDP-diglyceride synthase" + ], + "id": "CDS_1397", + "location": [ + [ + "NC_000913", + 1478226, + "+", + 897 + ] + ], + "md5": "ae5a4ecbce9787af9cc170e5593de926", + "parent_gene": "", + "protein_md5": "86f1435d79803d10963912079c47d749", + "protein_translation": "MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWGIVICFSMVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWGIPLNYLLIGFNCFELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004708" + ], + [ + "gene_synonym", + "ECK1403" + ], + [ + "gene_synonym", + "EcoGene:EG13750" + ], + [ + "gene_synonym", + "GI:16129371" + ], + [ + "gene_synonym", + "GeneID:945970" + ], + [ + "gene_synonym", + "JW1407" + ], + [ + "gene_synonym", + "NP_415928.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76092" + ], + [ + "gene_synonym", + "b1410" + ], + [ + "gene_synonym", + "ynbC" + ] + ], + "dna_sequence": "ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCGCTTTACAGCCCGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGGCATGAACATTCTGGTCGTCTACAACATCTCGTTGATGAACTGGCGATGCCAGATACTGCTTTTTATGCCTGGGATGCCCGAGGGCATGGAAAAAGTTCGGGGCCGCGTGGTTATAGCCCATCTCTTGCGCGTTCAGTGCGGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTTGGACTGGAAGAGGTGGTAGTGATCGCGCAAAGCGTCGGCGCAGTGCTGGTTGCCACATGGATTCATGATTATGCACCTGCAATTCGCGGGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGTCTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGGGGCGAGTTTCAATAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTCTACAAAACGTCTGAACGTATTATTAGAGATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCGCAGATTGATTTTTATCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAACAGGGCGCTGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCTCGGAATGAGCACCGGCTTTGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGCAAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCTCAACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGGCCTACGCTGGCGATTGTCTCTGGCCTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGCCAATGCCATCGAACCGGGCGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCTCAACTGGAGATGATTGCCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA", + "dna_sequence_length": 1758, + "functions": [ + "putative esterase" + ], + "id": "CDS_1398", + "location": [ + [ + "NC_000913", + 1479138, + "+", + 1758 + ] + ], + "md5": "d0c7202390621eb818aadc889b8feb89", + "parent_gene": "", + "protein_md5": "a1b53ba806abe67b0e73166b9ea2c65e", + "protein_translation": "MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHLVDELAMPDTAFYAWDARGHGKSSGPRGYSPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRGASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSSGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPGGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN", + "protein_translation_length": 585, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004710" + ], + [ + "gene_synonym", + "ECK1404" + ], + [ + "gene_synonym", + "EcoGene:EG13751" + ], + [ + "gene_synonym", + "GI:16129372" + ], + [ + "gene_synonym", + "GeneID:945985" + ], + [ + "gene_synonym", + "JW1408" + ], + [ + "gene_synonym", + "NP_415929.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76093" + ], + [ + "gene_synonym", + "b1411" + ], + [ + "gene_synonym", + "ynbD" + ] + ], + "dna_sequence": "TTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATCTCTTAATCAGTTCACCGCGGTTCAGGACCTTAACAGCCATGATATCCCCAGTCAGGTATTCGGTTGGGAAACGGCGATCCCTTTTCTTCCCTGGACTATTGTTCCTTACTGGAGTCTGGATCTTTTATATGGATTTTCGCTGTTCGTTTGTAGCACGACATTCGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTCTGCTGGCTACTTTGGCGTCACTTTCGTCAGCATCTGGCTGAGAGGTGGCGTAAAGTCTGCGGCGGATGGTTTTTACTCATCGCCATTTCGACGCTGACGACCTGGCAGCATCATTTTATTGATGTCATCACAGGGCTGGCGGTAGGTATGTTGATTGACTGGATGGTGCCCGTCGACCGTCGTTGGAATTATCAGAAACCTGATCAACGTCGAATCAAAATAGCACTGCCCTATGTCGTAGGCGCGGGCTCGTGCATTGTATTGATGGAGCTAATGATGATGATTCAGTTATGGTGGTCAGTCTGGTTATGTTGGCCAGTATTATCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAACTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGATTAGCTATATTCGAGCCAGACGCCCGCAGATTGTGCTGACAGACGAGCACAAAGCGATGCTGAGATTATGGGAAAACAGGTAA", + "dna_sequence_length": 1293, + "functions": [ + "putative phosphatase inner membrane protein" + ], + "id": "CDS_1399", + "location": [ + [ + "NC_000913", + 1480909, + "+", + 1293 + ] + ], + "md5": "6f683d4f8294aac436117e177d682790", + "parent_gene": "", + "protein_md5": "57e8775dbd7a7eaec035b7e7f801f3e6", + "protein_translation": "MLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDIPSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCGFLLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAERWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVVGAGSCIVLMELMMMIQLWWSVWLCWPVLSLLIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPCRIGMWLSMRWFCRRLEPVSKMTAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVNEAISYIRARRPQIVLTDEHKAMLRLWENR", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004712" + ], + [ + "gene_synonym", + "ECK1405" + ], + [ + "gene_synonym", + "EcoGene:EG12695" + ], + [ + "gene_synonym", + "GI:16129373" + ], + [ + "gene_synonym", + "GeneID:947569" + ], + [ + "gene_synonym", + "JW1409" + ], + [ + "gene_synonym", + "NP_415930.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41407" + ], + [ + "gene_synonym", + "acpD" + ], + [ + "gene_synonym", + "azoR" + ], + [ + "gene_synonym", + "b1412" + ] + ], + "dna_sequence": "ATGAGCAAGGTATTAGTTCTTAAATCCAGCATCCTGGCAGGGTACTCTCAGTCTAATCAGTTGTCCGATTATTTTGTTGAACAATGGCGCGAAAAGCACTCCGCTGATGAAATCACCGTTCGCGACCTGGCTGCAAATCCGATTCCGGTACTGGATGGCGAACTGGTTGGCGCTCTGCGTCCGAGCGATGCGCCGCTGACTCCGCGTCAGCAGGAAGCTCTGGCACTTTCCGATGAGTTGATTGCCGAGCTGAAAGCCCACGACGTTATCGTTATTGCGGCACCGATGTATAACTTCAACATCTCGACTCAGTTGAAAAACTATTTTGACCTGGTTGCCCGCGCAGGCGTTACTTTCCGCTATACCGAGAACGGTCCGGAAGGTCTGGTAACGGGTAAAAAAGCCATCGTTATTACCAGCCGCGGCGGGATCCACAAAGATGGACCAACGGACCTGGTGACGCCGTATCTGTCCACGTTCCTCGGCTTTATCGGCATTACCGATGTGAAATTTGTCTTCGCCGAAGGGATCGCATACGGTCCGGAAATGGCAGCGAAAGCACAGTCTGACGCAAAAGCAGCCATCGACAGCATTGTTTCTGCATAA", + "dna_sequence_length": 606, + "functions": [ + "NADH-azoreductase, FMN-dependent" + ], + "id": "CDS_1400", + "location": [ + [ + "NC_000913", + 1482860, + "-", + 606 + ] + ], + "md5": "eda35f43bccabdff2ce8610735ee7dae", + "parent_gene": "", + "protein_md5": "f5c6f93beed5caed2e31c09f11f7a653", + "protein_translation": "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004718" + ], + [ + "gene_synonym", + "ECK1406" + ], + [ + "gene_synonym", + "EcoGene:EG12936" + ], + [ + "gene_synonym", + "GI:145698255" + ], + [ + "gene_synonym", + "GeneID:948444" + ], + [ + "gene_synonym", + "JW5905" + ], + [ + "gene_synonym", + "NP_415931.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43329" + ], + [ + "gene_synonym", + "b1413" + ], + [ + "gene_synonym", + "hrpA" + ] + ], + "dna_sequence": "ATGACAGAACAACAAAAATTGACCTTTACGGCCTTGCAGCAGCGGCTGGATTCGCTGATGCTGCGTGACAGACTGCGTTTTTCTCGCCGTCTGCACGGCGTGAAGAAGGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCATACCCAGCCGCGTCGTCTGGCGGCAAGAACAGTGGCGAACCGTATTGCGGAAGAGCTGAAAACGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATGCGCTGAACAAGCTGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGATTTCCCAGGCGTCTGCCAATCAGCGTAAAGGCCGCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAGCTGGGCGCGATCACCACTGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAGTTGCCTGTCGACCCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTCCATTCAGGATCCGCGCGAACGTCCGATGGACAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAGTCTGACTTTCTCGCGTTTGTGAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCCAACGCCTTCCGTCGCCTGTGTCGTACCGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGTTTATTCAAAAAACCGCCTAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGCATTGCTGCGCGTATCGACCCGGAATGGGTGGAGCCAGTTGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGCAGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCCGCGCGCAAGGTCAACTACAGCCAGATCGATCCGGCGTTATGTCGTGAACTCTTTATTCGCCACGCGCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTTCCGTGAAAACCTGAAACTACGGGCGGAAGTAGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACGAAACGTTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTAATCTCCGCTCGCCACTTCGACAGCTGGTGGAAAAAAGTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAAAGCATGTTGATCAAAGAGGGCGCAGAAAAAATCAGCAAGCTGGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCCGGCGCGGATGCTGACGGTGTGACCGTACATATTCCGCTGCCGTTACTTAACCAGGTTGAGGAAAGCGGGTTTGAATGGCAGATCCCCGGTCTGCGCCGCGAACTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACCTTCCGCGTGGTGGATGACAAAAACAAGAAGCTAAAAGAAGGGCGCTCGCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTATCTGCGGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGCTACGAACAGAAGCGTGGCAACTACAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAGCGCGACAGTGTGGCGATCAAACTGTTTGATAACCCGCTGGAGCAAAAGCAGGCAATGTGGAACGGTCTTCGCCGTCTACTGCTGCTGAATATTCCATCGCCAATCAAATATTTACATGAAAAGTTACCGAACAAAGCCAAGCTGGGACTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTATCTCCTGCGGTGTGGATAAATTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAAAAAGTGCGTGCCGAACTGAACGACACGGTGGTGGATATTGCGAAGCAGGTCGAGCAAATCCTTACGGCAGTGTTCAATATCAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCGCTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGTTGGTATATCGCGGTTTTGTCACTGGTAACGGCTTCAAACGGCTGGGCGACACGCTGCGATATTTGCAGGCGATTGAAAAACGGCTGGAAAAACTGGCGGTTGATCCACATCGCGACCGTGCGCAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCAATGGATCAACAAACTGCCGCCCGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGTTGCGCGTTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGCGGTTAA", + "dna_sequence_length": 3903, + "functions": [ + "putative ATP-dependent helicase" + ], + "id": "CDS_1401", + "location": [ + [ + "NC_000913", + 1483061, + "+", + 3903 + ] + ], + "md5": "e54dea03afa3f51baa55c7617b397d53", + "parent_gene": "", + "protein_md5": "dafe55cfcf566dcee4325859fc5a5338", + "protein_translation": "MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG", + "protein_translation_length": 1300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004722" + ], + [ + "gene_synonym", + "ECK1407" + ], + [ + "gene_synonym", + "EcoGene:EG12110" + ], + [ + "gene_synonym", + "GI:16129375" + ], + [ + "gene_synonym", + "GeneID:946215" + ], + [ + "gene_synonym", + "JW1411" + ], + [ + "gene_synonym", + "NP_415932.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P34209" + ], + [ + "gene_synonym", + "b1414" + ], + [ + "gene_synonym", + "ydcF" + ] + ], + "dna_sequence": "ATGAACATTACCCCGTTTCCGACGCTTTCGCCGGCAACTATAGATGCCATAAATGTTATCGGACAGTGGCTGGCGCAGGATGATTTCTCCGGTGAGGTGCCGTATCAGGCCGATTGCGTGATCCTTGCAGGCAATGCGGTTATGCCGACTATCGATGCGGCATGTAAGATTGCCCGCGATCAGCAAATTCCTTTACTGATTAGTGGTGGTATCGGTCACTCGACAACTTTTTTGTATAGCGCCATCGCACAGCATCCGCACTACAACACTATCCGCACCACTGGCAGAGCAGAAGCGACCATCCTGGCGGATATCGCTCATCAGTTCTGGCACATTCCGCATGAAAAAATCTGGATTGAAGACCAGTCAACAAACTGCGGTGAAAACGCACGCTTTAGCATCGCGCTATTGAATCAGGCCGTAGAACGAGTTCATACGGCTATCGTTGTTCAGGACCCCACCATGCAGCGGCGCACGATGGCGACGTTCCGCCGTATGACTGGGGACAATCCCGATGCACCACGCTGGTTAAGTTATCCCGGATTCGTTCCTCAGTTAGGAAATAACGCAGACAGTGTAATCTTTATTAATCAGTTACAAGGATTATGGCCAGTTGAGCGTTATCTCTCACTACTCACTGGCGAGCTGCCGCGTTTACGCGATGATAGCGATGGCTACGGTCCCCGCGGGCGAGATTTTATCGTTCACGTTGATTTTCCGGCAGAAGTCATCCATGCATGGCAAACGCTGAAACATGATGCGGTGCTCATCGAGGCGATGGAAAGTCGCTCGTTACGTTAA", + "dna_sequence_length": 801, + "functions": [ + "DUF218 superfamily protein, SAM-binding" + ], + "id": "CDS_1402", + "location": [ + [ + "NC_000913", + 1487235, + "+", + 801 + ] + ], + "md5": "668ccc963faec836899e0ab177086325", + "parent_gene": "", + "protein_md5": "be2d224193ffe564e32c8b68a89592d8", + "protein_translation": "MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLR", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004725" + ], + [ + "gene_synonym", + "ECK1408" + ], + [ + "gene_synonym", + "EcoGene:EG10035" + ], + [ + "gene_synonym", + "GI:16129376" + ], + [ + "gene_synonym", + "GeneID:945672" + ], + [ + "gene_synonym", + "JW1412" + ], + [ + "gene_synonym", + "NP_415933.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25553" + ], + [ + "gene_synonym", + "ald" + ], + [ + "gene_synonym", + "aldA" + ], + [ + "gene_synonym", + "b1415" + ] + ], + "dna_sequence": "ATGTCAGTACCCGTTCAACATCCTATGTATATCGATGGACAGTTTGTTACCTGGCGTGGAGACGCATGGATTGATGTGGTAAACCCTGCTACAGAGGCTGTCATTTCCCGCATACCCGATGGTCAGGCCGAGGATGCCCGTAAGGCAATCGATGCAGCAGAACGTGCACAACCAGAATGGGAAGCGTTGCCTGCTATTGAACGCGCCAGTTGGTTGCGCAAAATCTCCGCCGGGATCCGCGAACGCGCCAGTGAAATCAGTGCGCTGATTGTTGAAGAAGGGGGCAAGATCCAGCAGCTGGCTGAAGTCGAAGTGGCTTTTACTGCCGACTATATCGATTACATGGCGGAGTGGGCACGGCGTTACGAGGGCGAGATTATTCAAAGCGATCGTCCAGGAGAAAATATTCTTTTGTTTAAACGTGCGCTTGGTGTGACTACCGGCATTCTGCCGTGGAACTTCCCGTTCTTCCTCATTGCCCGCAAAATGGCTCCCGCTCTTTTGACCGGTAATACCATCGTCATTAAACCTAGTGAATTTACGCCAAACAATGCGATTGCATTCGCCAAAATCGTCGATGAAATAGGCCTTCCGCGCGGCGTGTTTAACCTTGTACTGGGGCGTGGTGAAACCGTTGGGCAAGAACTGGCGGGTAACCCAAAGGTCGCAATGGTCAGTATGACAGGCAGCGTCTCTGCAGGTGAGAAGATCATGGCGACTGCGGCGAAAAACATCACCAAAGTGTGTCTGGAATTGGGGGGTAAAGCACCAGCTATCGTAATGGACGATGCCGATCTTGAACTGGCAGTCAAAGCCATCGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGAAAGGATATTATTATCCGCCGACATTGCTGCTGGATGTTCGCCAGGAAATGTCGATTATGCATGAGGAAACCTTTGGCCCGGTGCTGCCAGTTGTCGCATTTGACACGCTGGAAGATGCTATCTCAATGGCTAATGACAGTGATTACGGCCTGACCTCATCAATCTATACCCAAAATCTGAACGTCGCGATGAAAGCCATTAAAGGGCTGAAGTTTGGTGAAACTTACATCAACCGTGAAAACTTCGAAGCTATGCAAGGCTTCCACGCCGGATGGCGTAAATCCGGTATTGGCGGCGCAGATGGTAAACATGGCTTGCATGAATATCTGCAGACCCAGGTGGTTTATTTACAGTCTTAA", + "dna_sequence_length": 1440, + "functions": [ + "aldehyde dehydrogenase A, NAD-linked" + ], + "id": "CDS_1403", + "location": [ + [ + "NC_000913", + 1488232, + "+", + 1440 + ] + ], + "md5": "345c8b88ac3f6c35e84fd45c961f4de6", + "parent_gene": "", + "protein_md5": "231cde29fd90ffdeb0d36f6deea14d2e", + "protein_translation": "MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS", + "protein_translation_length": 479, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004727" + ], + [ + "gene_synonym", + "ASAP:ABE-0004729" + ], + [ + "gene_synonym", + "ASAP:ABE-0285094" + ], + [ + "gene_synonym", + "ECK1409" + ], + [ + "gene_synonym", + "EcoGene:EG12103" + ], + [ + "gene_synonym", + "GeneID:2847738" + ], + [ + "gene_synonym", + "JW1413" + ], + [ + "gene_synonym", + "JW5906" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33898" + ], + [ + "gene_synonym", + "b4493" + ], + [ + "gene_synonym", + "gapC" + ] + ], + "dna_sequence": "ATGAGTAAAGTTGGTATTAACGGTTTTGGTCGTATCGGTCGACTGGTGTTGGGTCGATTACTTGAAGTCAAAAGCAACATAGACGTTGTCGCTATTAATGATCTCACTTCCCCATAAATTCTCGCCTACCTGCTGAAACATGATTCAAACTACGGACCATTCCCCTGGAGCGTTGATTTTACGGAAGATTCACTTATCGTTGATGGGAAAAGTATCGCGGTTTACGCCGAAAAAGAGGCTAAAAATATTCCGTGGAAAGCGAAAGGTGCAGAAATCATTGTCGAATGTACTGGCTTTTATACCTCCGCCGAGAAATCGCAGGCGCATCTTGATGCTGGTGCGAAGAAGGTGTTGATTTCCGCCCCTGCCGGTGAAATGAAAACTATCGTTTATAACGTCAATGACGACACTCTGGATGGCAACGACACCATTGTTTCCGTGGCGTCATGCACCACTAACTGTCTTGCGCCGATGGCCAAAGCCTTGCATGACAGTTTCGGGATAGAAGTCGGCACGATGACGACCATTCATGCCTATACTGGCACCCAGTCACTGGTGGATGGCCCGCGTGGTAAAGATTTACGTGCTTCACGCGCAGCGGCAGAAAATATCATTCCCCACACTACGGGGGCGGCAAAAGCCATTGGTCTGGTGATCCCGGAACTGAGCGGCAAACTGAAAGGTCATGCGCAACGCGTGCCGGTGAAAACAGGTTCGGTCACTGAACTGGTATCGATTCTCGGAAAAAAGGTGACTGCCGAAGAGGTGAATAACGCACTTAAACAAGCAACCACCAATAACGAGTCATTTGGTTATACCGATGAAGAAATAGTCTCTTCCGATATCATTGGCAGCCATTTCGGTTCGGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGA", + "dna_sequence_length": 1002, + "id": "CDS_1404", + "location": [ + [ + "NC_000913", + 1490713, + "-", + 750 + ], + [ + "NC_000913", + 1489964, + "-", + 252 + ] + ], + "md5": "2e0becaca5ef901ca9063710c131e845", + "parent_gene": "", + "protein_md5": "933664ba163cff529826cabe41fd20ed", + "protein_translation": "MSKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSP", + "protein_translation_length": 38, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004733" + ], + [ + "gene_synonym", + "ECK1410" + ], + [ + "gene_synonym", + "EcoGene:EG10172" + ], + [ + "gene_synonym", + "GI:90111268" + ], + [ + "gene_synonym", + "GeneID:947241" + ], + [ + "gene_synonym", + "JW5224" + ], + [ + "gene_synonym", + "NP_415935.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABE5" + ], + [ + "gene_synonym", + "b1418" + ], + [ + "gene_synonym", + "cybB" + ] + ], + "dna_sequence": "ATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCATCAACATGATTCATGTTTCCTGTGGCATCTCAATTCTCGTGCTGATGGTCGTTCGTCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGTTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATATTTTGTCATCGGGTTGCACGCTGCGGCTGCACTGGCACACCACTATTTCTGGAAGGACAACACACTTCTACGCATGATGCCGCGTAAACGTTCCTGA", + "dna_sequence_length": 531, + "functions": [ + "cytochrome b561" + ], + "id": "CDS_1405", + "location": [ + [ + "NC_000913", + 1490902, + "+", + 531 + ] + ], + "md5": "40a90c72dd82cab7e38f344230bc522a", + "parent_gene": "", + "protein_md5": "076eb144eb4ed579bce42ec9beee5823", + "protein_translation": "MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004736" + ], + [ + "gene_synonym", + "ECK1411" + ], + [ + "gene_synonym", + "EcoGene:EG11219" + ], + [ + "gene_synonym", + "GI:16129378" + ], + [ + "gene_synonym", + "GeneID:945986" + ], + [ + "gene_synonym", + "JW1416" + ], + [ + "gene_synonym", + "NP_415936.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACW4" + ], + [ + "gene_synonym", + "b1419" + ], + [ + "gene_synonym", + "ydcA" + ] + ], + "dna_sequence": "ATGAAAAAACTGGCACTTATTTTGTTTATGGGAACGCTTGTTTCCTTTTATGCCGATGCCGGGCGCAAACCCTGTTCTGGTTCGAAAGGGGGGATCTCACACTGTACGGCAGGCGGCAAATTTGTCTGTAATGATGGTTCTATTAGTGCATCGAAAAAAACATGCACTAACTGA", + "dna_sequence_length": 174, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_1406", + "location": [ + [ + "NC_000913", + 1491677, + "+", + 174 + ] + ], + "md5": "e93932aaf27c87b6e9f5f9f0e556743e", + "parent_gene": "", + "protein_md5": "c644a0db127a3ef79f5e313345406a27", + "protein_translation": "MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047283" + ], + [ + "gene_synonym", + "ECK1412" + ], + [ + "gene_synonym", + "EcoGene:EG11240" + ], + [ + "gene_synonym", + "GI:49176107" + ], + [ + "gene_synonym", + "GeneID:2847727" + ], + [ + "gene_synonym", + "JW5225" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77494" + ], + [ + "gene_synonym", + "YP_025301.1" + ], + [ + "gene_synonym", + "b4428" + ], + [ + "gene_synonym", + "hokB" + ], + [ + "gene_synonym", + "ydcB" + ] + ], + "dna_sequence": "ATGAAGCACAACCCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACTCCTGACCCGACAAACGCTCTACGAACTGCGGTTCCGGGACGGTGATAAGGAGGTTGCTGCGCTCATGGCCTGCACGTCCAGGTAA", + "dna_sequence_length": 150, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_1407", + "location": [ + [ + "NC_000913", + 1492071, + "-", + 150 + ] + ], + "md5": "be9842f8b62b1cff75b4ebeba967e155", + "parent_gene": "", + "protein_md5": "702375b166e5701885362211213db51b", + "protein_translation": "MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR", + "protein_translation_length": 49, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004738" + ], + [ + "gene_synonym", + "ECK1413" + ], + [ + "gene_synonym", + "EcoGene:EG20260" + ], + [ + "gene_synonym", + "GI:16129379" + ], + [ + "gene_synonym", + "GeneID:948820" + ], + [ + "gene_synonym", + "JW5882" + ], + [ + "gene_synonym", + "NP_415937.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76096" + ], + [ + "gene_synonym", + "b1420" + ], + [ + "gene_synonym", + "mokB" + ] + ], + "dna_sequence": "ATGAACCTAGCAATTCAGATCTTAGCCTCTTACCCGCCATCCGGCAAGGAGAAAGGCTATGAAGCACAACCCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACTCCTGACCCGACAAACGCTCTACGAACTGCGGTTCCGGGACGGTGA", + "dna_sequence_length": 168, + "functions": [ + "regulatory peptide" + ], + "id": "CDS_1408", + "location": [ + [ + "NC_000913", + 1492129, + "-", + 168 + ] + ], + "md5": "aae1a7887738d0beb248d4630857d0bc", + "parent_gene": "", + "protein_md5": "5ac97ccb86020d5924b889fd3a525485", + "protein_translation": "MNLAIQILASYPPSGKEKGYEAQPSGGVSAHYLHYDSDIHTPDPTNALRTAVPGR", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004744" + ], + [ + "gene_synonym", + "ECK1415" + ], + [ + "gene_synonym", + "EcoGene:EG11018" + ], + [ + "gene_synonym", + "GI:16129380" + ], + [ + "gene_synonym", + "GeneID:945995" + ], + [ + "gene_synonym", + "JW1417" + ], + [ + "gene_synonym", + "NP_415938.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05704" + ], + [ + "gene_synonym", + "b1421" + ], + [ + "gene_synonym", + "trg" + ] + ], + "dna_sequence": "ATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGCCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCGCGATCAGCGTGATGTTACTGCGGAGATTGAGATTCGGACCGGGTTAGCGAACAGTTCAGATTTTTTGCGTTCAGCCCGGATCAATATGATTCAGGCCGGGGCTGCGAGTCGTATTGCGGAAATGGAAGCAATGAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATATTTTGAACAAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAACCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCTGGCAATGCGGACCTGTCATCTCGCACCGAAGAACAAGCGGCGGCTATCGAACAAACTGCCGCCAGCATGGAGCAACTCACTGCGACGGTGAAACAGAATGCGGATAACGCGCATCATGCCAGCAAACTGGCGCAAGAGGCTTCTATTAAAGCCAGCGATGGCGGGCAGACGGTTTCCGGTGTAGTAAAAACGATGGGCGCTATCTCCACGAGTTCGAAGAAAATTTCTGAGATCACCGCCGTCATCAACAGTATTGCTTTCCAGACGAATATTCTGGCACTGAATGCTGCCGTTGAAGCCGCGCGAGCGGGTGAGCAAGGGCGTGGATTTGCCGTTGTCGCCAGCGAAGTACGGACACTCGCAAGTCGCAGCGCTCAGGCGGCGAAAGAGATTGAAGGCTTGATCAGTGAATCAGTCAGGTTAATTGACCTGGGGTCGGATGAGGTGGCAACGGCCGGGAAAACCATGAGCACTATTGTTGATGCCGTCGCGAGTGTCACACATATCATGCAGGAAATCGCCGCCGCCTCGGATGAACAAAGTAGAGGCATAACGCAGGTTAGCCAGGCGATTTCTGAAATGGATAAGGTGACGCAACAGAATGCTTCTCTGGTAGAAGAGGCCTCAGCGGCGGCGGTGTCCCTTGAAGAACAGGCGGCACGATTAACTGAGGCGGTGGATGTATTCCGTCTGCACAAACATTCTGTGTCGGCAGAACCTCGCGGAGCGGGTGAACCAGTTAGTTTCGCTACGGTGTGA", + "dna_sequence_length": 1641, + "functions": [ + "methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor" + ], + "id": "CDS_1409", + "location": [ + [ + "NC_000913", + 1492470, + "+", + 1641 + ] + ], + "md5": "99637f0073e30f4cb221376ed56a2cc6", + "parent_gene": "", + "protein_md5": "df2f866ec0f8d7dff30efa9ac431b14c", + "protein_translation": "MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQADRDQRDVTAEIEIRTGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESEIKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHESEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKIASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLSSRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQTVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLHKHSVSAEPRGAGEPVSFATV", + "protein_translation_length": 546, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004746" + ], + [ + "gene_synonym", + "ECK1416" + ], + [ + "gene_synonym", + "EcoGene:EG13752" + ], + [ + "gene_synonym", + "GI:90111269" + ], + [ + "gene_synonym", + "GeneID:948865" + ], + [ + "gene_synonym", + "JW5226" + ], + [ + "gene_synonym", + "NP_415939.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77171" + ], + [ + "gene_synonym", + "b1422" + ], + [ + "gene_synonym", + "ydcI" + ] + ], + "dna_sequence": "ATGGAAAAAAATAGTCTGTTTAGTCAGCGCATCCGTTTGCGCCACCTTCATACATTCGTAGCTGTCGCACAACAAGGAACTTTGGGGCGCGCGGCTGAAACCCTTAATTTGAGTCAACCTGCGCTCTCTAAGACATTGAATGAACTGGAGCAGCTGACTGGCGCTCGCTTGTTTGAGCGTGGTCGTCAGGGGGCGCAACTTACCTTACCCGGCGAACAATTTTTAACGCATGCAGTCAGAGTTCTTGACGCCATCAACACTGCCGGACGGTCGCTTCATCGTAAAGAAGGTCTTAATAATGATGTCGTCAGGGTTGGTGCACTACCTACTGCGGCACTGGGGATATTACCTTCGGTTATAGGTCAGTTTCATCAGCAACAAAAAGAGACGACCTTGCAAGTTGCGACAATGAGTAACCCTATGATTCTGGCGGGTTTAAAAACCGGGGAAATCGATATCGGCATTGGTCGGATGTCAGATCCTGAACTGATGACCGGGCTTAATTACGAACTGCTGTTTCTTGAATCGTTGAAGCTGGTTGTCCGCCCTAATCACCCGCTACTTCAGGAGAACGTAACGCTAAGCCGGGTGCTGGAATGGCCGGTCGTTGTATCACCAGAAGGCACTGCGCCACGCCAGCATTCAGATGCATTAGTGCAGAGCCAGGGCTGTAAAATTCCTTCGGGTTGTATCGAAACGCTGTCTGCTTCGCTATCTCGTCAACTTACGGTTGAATACGATTACGTGTGGTTTGTCCCTTCTGGCGCTGTAAAAGACGACCTGCGTCATGCCACGCTGGTGGCCCTGCCTGTTCCGGGACATGGTGCAGGCGAACCGATTGGAATACTGACCCGCGTAGATGCGACGTTCTCTTCTGGTTGCCAGTTGATGATTAACGCTATTCGAAAATCAATGCCGTTCTGA", + "dna_sequence_length": 924, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1410", + "location": [ + [ + "NC_000913", + 1495071, + "-", + 924 + ] + ], + "md5": "4a03fcc066986d1aba3081172cb07778", + "parent_gene": "", + "protein_md5": "fc2a7101356ddd3241030d783952b9ba", + "protein_translation": "MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINAIRKSMPF", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004750" + ], + [ + "gene_synonym", + "ECK1417" + ], + [ + "gene_synonym", + "EcoGene:EG13753" + ], + [ + "gene_synonym", + "GI:16129382" + ], + [ + "gene_synonym", + "GeneID:945991" + ], + [ + "gene_synonym", + "JW1419" + ], + [ + "gene_synonym", + "NP_415940.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76097" + ], + [ + "gene_synonym", + "b1423" + ], + [ + "gene_synonym", + "ydcJ" + ] + ], + "dna_sequence": "ATGGCGAACAGCATCACGGCGGATGAGATTCGGGAACAGTTTTCGCAGGCAATGTCAGCCATGTACCAGCAAGAAGTTCCGCAATATGGCACGCTGCTGGAACTGGTAGCTGATGTGAATCTGGCTGTGCTGGAAAACAATCCTCAACTGCACGAAAAAATGGTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATGCTTCTCTGGCGCGTAATCCCTTCCGCGTTTTTACCTCCTTACTCCGCCTTGAGCTTATCGAGAACGAAATTTTGCGCCAGAAAGCGGCGGAGATTCTGCGTCAGCGCGATATCTTCACCCCACGTTGTCGACAACTGTTAGAGGAATATGAGCAGCAGGGCGGTTTTAACGAAACACAGGCACAGGAGTTTGTGCAGGAAGCCCTGGAAACGTTTCGCTGGCACCAGTCAGCAACGGTAGATGAAGAAACCTATCGCGCATTGCACAACGAACATCGGTTGATTGCTGATGTGGTCTGTTTTCCTGGATGCCATATCAACCACCTGACGCCACGTACGCTGGATATTGACCGGGTGCAGTCGATGATGCCTGAATGCGGAATTGAACCCAAAATTCTCATCGAGGGGCCGCCGCGCCGCGAGGTACCGATTTTACTACGCCAGACCAGCTTTAAAGCACTGGAAGAGACGGTGTTGTTTGCGGGGCAGAAACAGGGCACGCATACCGCGCGCTTTGGTGAAATTGAGCAGCGTGGCGTGGCATTAACGCCGAAAGGGCGACAACTGTATGATGATCTTCTGCGTAACGCTGGAACCGGGCAGGATAATCTCACTCACCAAATGCATTTACAGGAAACCTTCCGCACTTTTCCTGACAGTGAGTTTTTAATGCGTCAGCAAGGGTTGGCATGGTTCCGGTACCGTCTGACGCCTTCGGGTGAGGCGCATCGTCAGGCGATTCATCCTGGAGACGATCCACAGCCCTTAATTGAACGTGGTTGGGTAGTGGCGCAACCCATCACCTATGAAGATTTCTTGCCCGTTAGCGCGGCGGGGATCTTCCAGTCAAATCTGGGTAATGAAACGCAGACACGCAGTCACGGTAATGCCAGTCGCGAAGCATTTGAGCAGGCGTTGGGTTGTCCGGTTTTGGATGAGTTCCAGCTTTACCAGGAAGCGGAAGAACGCAGTAAACGTCGCTGTGGTTTGCTTTAA", + "dna_sequence_length": 1344, + "functions": [ + "putative metalloenzyme" + ], + "id": "CDS_1411", + "location": [ + [ + "NC_000913", + 1495288, + "+", + 1344 + ] + ], + "md5": "f05768373ff1b3c8a8105d1c5171951c", + "parent_gene": "", + "protein_md5": "b2395aaf32657e4614543858edf0ce19", + "protein_translation": "MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004754" + ], + [ + "gene_synonym", + "ECK1418" + ], + [ + "gene_synonym", + "EcoGene:EG12859" + ], + [ + "gene_synonym", + "GI:145698256" + ], + [ + "gene_synonym", + "GeneID:945994" + ], + [ + "gene_synonym", + "JW1420" + ], + [ + "gene_synonym", + "NP_415941.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40120" + ], + [ + "gene_synonym", + "b1424" + ], + [ + "gene_synonym", + "mdoD" + ], + [ + "gene_synonym", + "opgD" + ], + [ + "gene_synonym", + "ydcG" + ], + [ + "gene_synonym", + "yzzZ" + ] + ], + "dna_sequence": "ATGGATCGTAGACGATTTATTAAAGGTTCAATGGCTATGGCCGCCGTGTGCGGTACCAGCGGCATTGCTTCTCTTTTTTCTCAGGCGGCATTCGCGGCAGATTCTGATATTGCCGACGGGCAAACCCAGCGTTTTGACTTCTCCATTCTACAGTCAATGGCGCACGACTTAGCGCAAACAGCGTGGCGTGGTGCGCCTCGTCCGTTACCTGACACGCTGGCGACAATGACGCCGCAGGCTTATAACAGTATTCAATACGACGCCGAAAAATCGCTCTGGCATAACGTTGAGAACCGTCAACTGGACGCTCAGTTCTTCCATATGGGAATGGGATTCCGTCGCCGCGTTCGTATGTTTTCTGTAGATCCAGCAACACATCTGGCGCGTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGTTGCTCGATAGCGCCAGCATTACTGGTGCCTATAAGTTCACTATCCATTGTGAGAAAAGTCAGGTGATTATGGATGTGGAAAATCACCTGTATGCGCGCAAAGACATTAAACAGCTGGGCATTGCGCCGATGACCAGTATGTTCAGCTGCGGTACTAATGAACGTCGGATGTGCGATACAATTCATCCGCAAATTCATGACTCTGATCGTCTGTCCATGTGGCGGGGCAACGGCGAGTGGATTTGCCGTCCGCTGAATAATCCGCAAAAATTGCAGTTCAATGCTTACACCGACAACAACCCGAAAGGGTTTGGTTTATTGCAACTGGATCGTGACTTCTCCCATTATCAGGACATTATGGGCTGGTATAACAAACGCCCAAGTCTGTGGGTGGAACCGCGTAACAAGTGGGGTAAGGGCACCATCGGCCTGATGGAAATCCCAACAACGGGCGAAACGCTGGATAACATTGTCTGCTTCTGGCAGCCAGAAAAAGCTGTAAAAGCAGGTGATGAGTTTGCATTCCAGTATCGTCTGTACTGGAGTGCGCAACCGCCTGTTCATTGCCCATTAGCGCGCGTTATGGCGACGCGTACCGGCATGGGCGGTTTCTCGGAAGGTTGGGCGCCAGGTGAACACTATCCCGAAAAATGGGCGCGTCGTTTTGCCGTCGATTTCGTTGGTGGTGATCTGAAAGCTGCCGCGCCAAAAGGCATTGAGCCGGTGATTACGCTTTCCAGTGGGGAAGCGAAGCAAATCGAAATTCTCTATATTGAACCCATCGATGGTTATCGTATTCAGTTTGACTGGTATCCGACTTCGGACTCCACTGATCCGGTCGATATGCGGATGTATCTACGTTGTCAGGGGGACGCTATCAGTGAAACATGGCTGTATCAGTATTTCCCGCCAGCGCCGGATAAACGTCAGTATGTTGACGACCGCGTGATGAGTTAA", + "dna_sequence_length": 1656, + "functions": [ + "OPG biosynthetic periplasmic protein" + ], + "id": "CDS_1412", + "location": [ + [ + "NC_000913", + 1496856, + "+", + 1656 + ] + ], + "md5": "ce9fdf29c40fb9ec91bf3ae328294a46", + "parent_gene": "", + "protein_md5": "8da9e36b383a4ebfd541dc96ed729113", + "protein_translation": "MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFSEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004761" + ], + [ + "gene_synonym", + "ECK1419" + ], + [ + "gene_synonym", + "EcoGene:EG12865" + ], + [ + "gene_synonym", + "GI:90111271" + ], + [ + "gene_synonym", + "GeneID:945997" + ], + [ + "gene_synonym", + "JW5823" + ], + [ + "gene_synonym", + "NP_415943.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACW6" + ], + [ + "gene_synonym", + "b1426" + ], + [ + "gene_synonym", + "ydcH" + ] + ], + "dna_sequence": "ATGTTTCCAGAATACCGAGATTTAATATCCCGTCTGAAAAACGAAAATCCTCGCTTTATGTCCTTGTTCGATAAACACAATAAACTTGATCATGAAATTGCCAGAAAGGAAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAA", + "dna_sequence_length": 225, + "functions": [ + "DUF465 family protein" + ], + "id": "CDS_1413", + "location": [ + [ + "NC_000913", + 1498651, + "+", + 225 + ] + ], + "md5": "6d990d4fdc28065e7928651bc379c368", + "parent_gene": "", + "protein_md5": "6bf54baee61b13e781585b52912ea80c", + "protein_translation": "MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV", + "protein_translation_length": 74, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004763" + ], + [ + "gene_synonym", + "ECK1420" + ], + [ + "gene_synonym", + "EcoGene:EG10853" + ], + [ + "gene_synonym", + "GI:16129386" + ], + [ + "gene_synonym", + "GeneID:945998" + ], + [ + "gene_synonym", + "JW1423" + ], + [ + "gene_synonym", + "NP_415944.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13857" + ], + [ + "gene_synonym", + "b1427" + ], + [ + "gene_synonym", + "rimL" + ] + ], + "dna_sequence": "ATGACTGAAACGATAAAAGTAAGCGAATCACTTGAATTACATGCTGTTGCAGAAAATCACGTCAAACCTCTTTATCAGTTAATCTGTAAAAATAAAACCTGGTTACAGCAGTCGCTAAACTGGCCGCAGTTTGTTCAAAGTGAAGAGGACACGCGAAAAACGGTGCAGGGTAATGTGATGTTGCATCAACGCGGCTATGCCAAAATGTTCATGATTTTCAAAGAAGATGAACTTATCGGCGTTATCTCGTTTAATCGTATTGAACCACTGAATAAAACCGCTGAAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATTCATCATTACGCCCAGTCTGGTGAACTTAGACGCTTCGTGATCAAATGTCGGGTGGACAATCCGCAAAGCAACCAGGTCGCTTTGCGCAATGGTTTTATCCTTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAA", + "dna_sequence_length": 540, + "functions": [ + "ribosomal-protein-L7/L12-serine acetyltransferase" + ], + "id": "CDS_1414", + "location": [ + [ + "NC_000913", + 1498938, + "+", + 540 + ] + ], + "md5": "57bca4130624c2e507d7c70f2662ac22", + "parent_gene": "", + "protein_md5": "6408eb76cbb8f864c5a094fcad6fd378", + "protein_translation": "MTETIKVSESLELHAVAENHVKPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDSQ", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004765" + ], + [ + "gene_synonym", + "ECK1421" + ], + [ + "gene_synonym", + "EcoGene:EG13754" + ], + [ + "gene_synonym", + "GI:16129387" + ], + [ + "gene_synonym", + "GeneID:944932" + ], + [ + "gene_synonym", + "JW1424" + ], + [ + "gene_synonym", + "NP_415945.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76100" + ], + [ + "gene_synonym", + "b1428" + ], + [ + "gene_synonym", + "ydcK" + ] + ], + "dna_sequence": "ATGCGCAAATATCGTCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAATGTGTTATTACGGCAGATTATCGCCATTAGCGATTTTAACGATGTGATAGCAGGAACCGCTGGCGGCTGGATCGATCGCGAAACGGTGTTAGCACAAGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAGCGGTGATTTCCGGTAATACGCGTATCACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAACGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGCATATATAAGTGACAGCGTCACCATTCATGACTCATTAGTTTACGGGCAATGTAGAATATTTGGTCACGCCTTAATTGATCAACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTCCAAATTTATGATCGCGCAAGGGTTAGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGTCCGGTATGCTTTTATTGAACATCGCGCCGAAGTTTTTGATTTTGCCAGTATTGAAGGTAATGAAGAGAACAATGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACGCGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTGGAAGGTAATTGTGTGTTAAAACATCATGTCTTGGTTGGCGGAAATGCCGTGGTACGTGGCGGACCGATTCTGCTCGACGAGCACGTTGTCATACAAGGTGAGAGCCGTATTACAGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCGTCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAGCGCATTACGCGAACGCCGCTGGCAGGGTTATTGTGA", + "dna_sequence_length": 981, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1415", + "location": [ + [ + "NC_000913", + 1500449, + "-", + 981 + ] + ], + "md5": "d6a2d0eb411c2499e5969e59dfdb7b29", + "parent_gene": "", + "protein_md5": "e2acdcc9d367a2e54897181b035e4d85", + "protein_translation": "MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLVGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004770" + ], + [ + "gene_synonym", + "ECK1422" + ], + [ + "gene_synonym", + "EcoGene:EG11883" + ], + [ + "gene_synonym", + "GI:16129388" + ], + [ + "gene_synonym", + "GeneID:945852" + ], + [ + "gene_synonym", + "JW1425" + ], + [ + "gene_synonym", + "NP_415946.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25396" + ], + [ + "gene_synonym", + "b1429" + ], + [ + "gene_synonym", + "tehA" + ] + ], + "dna_sequence": "ATGCAGAGCGATAAAGTGCTCAATTTGCCGGCAGGCTACTTTGGTATTGTGTTGGGGACGATAGGGATGGGATTTGCCTGGCGCTATGCCAGCCAGGTTTGGCAGGTCAGCCACTGGTTAGGGGATGGGCTGGTGATTCTGGCGATGATCATCTGGGGATTATTGACTAGCGCATTTATTGCCCGACTCATACGCTTTCCGCATAGCGTGCTGGCGGAAGTTCGCCATCCAGTGCTGAGCAGTTTTGTGAGTTTGTTTCCGGCAACGACGATGCTGGTGGCGATTGGTTTTGTTCCGTGGTTTCGCCCACTGGCGGTGTGCCTGTTCAGTTTTGGTGTCGTGGTTCAGTTGGCTTATGCCGCCTGGCAAACTGCGGGATTATGGCGCGGATCTCACCCTGAAGAAGCTACCACGCCTGGACTGTATCTGCCGACAGTTGCCAACAACTTTATCAGCGCAATGGCCTGTGGTGCGTTGGGCTACACCGACGCCGGTCTGGTGTTTTTAGGCGCAGGCGTTTTCTCATGGCTAAGCCTTGAACCGGTGATCTTGCAGCGTCTGCGCAGTTCGGGAGAATTACCCACGGCACTGCGGACATCACTCGGCATTCAGCTCGCTCCTGCGCTGGTGGCTTGTAGTGCCTGGCTGAGCGTCAACGGCGGCGAGGGTGACACGCTGGCGAAAATGCTTTTCGGTTATGGACTGCTGCAACTGCTGTTTATGCTACGTCTGATGCCATGGTATCTCTCCCAGCCATTTAATGCTTCATTCTGGAGTTTCTCGTTCGGCGTATCTGCACTGGCAACCACCGGTTTGCATCTGGGGAGTGGCAGCGATAATGGATTTTTCCATACGCTGGCGGTGCCGCTGTTTATCTTTACCAATTTTATTATTGCAATACTGCTCATCCGTACTTTTGCGCTTCTGATGCAGGGAAAATTGTTAGTCAGAACCGAGCGCGCCGTTTTAATGAAAGCAGAGGACAAAGAATGA", + "dna_sequence_length": 993, + "functions": [ + "potassium-tellurite ethidium and proflavin transporter" + ], + "id": "CDS_1416", + "location": [ + [ + "NC_000913", + 1500573, + "+", + 993 + ] + ], + "md5": "96528d65d61591d7d247c927c92cab58", + "parent_gene": "", + "protein_md5": "a2a361f02254dc9d096f1496531850ba", + "protein_translation": "MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGLVILAMIIWGLLTSAFIARLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFRPLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALGYTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSVNGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGSGSDNGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004772" + ], + [ + "gene_synonym", + "ECK1423" + ], + [ + "gene_synonym", + "EcoGene:EG11884" + ], + [ + "gene_synonym", + "GI:16129389" + ], + [ + "gene_synonym", + "GeneID:945979" + ], + [ + "gene_synonym", + "JW1426" + ], + [ + "gene_synonym", + "NP_415947.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25397" + ], + [ + "gene_synonym", + "b1430" + ], + [ + "gene_synonym", + "tehB" + ] + ], + "dna_sequence": "ATGATCATTCGTGACGAAAACTATTTTACTGATAAATATGAATTAACCCGCACACACTCTGAAGTACTGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGA", + "dna_sequence_length": 594, + "functions": [ + "tellurite, selenium methyltransferase, SAM-dependent", + "tellurite, selenium resistance protein" + ], + "id": "CDS_1417", + "location": [ + [ + "NC_000913", + 1501562, + "+", + 594 + ] + ], + "md5": "18c3302bee2a08d5bd72f4583d2b171b", + "parent_gene": "", + "protein_md5": "2d6523ddf0ad0be0f0ebd2425a2ed785", + "protein_translation": "MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004775" + ], + [ + "gene_synonym", + "ECK1424" + ], + [ + "gene_synonym", + "EcoGene:EG13755" + ], + [ + "gene_synonym", + "GI:16129390" + ], + [ + "gene_synonym", + "GeneID:948203" + ], + [ + "gene_synonym", + "JW1427" + ], + [ + "gene_synonym", + "NP_415948.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64451" + ], + [ + "gene_synonym", + "b1431" + ], + [ + "gene_synonym", + "ydcL" + ] + ], + "dna_sequence": "ATGCGTACCACATCATTTGCGAAAGTTGCAGCTTTATGCGGCTTATTGGCTCTGTCTGGTTGTGCATCTAAAATCACCCAGCCAGATAAATATTCTGGTTTTTTAAACAATTACTCTGATTTAAAAGAAACAACCTCGGCTACAGGTAAACCTGTTTTACGTTGGGTAGACCCGAGTTTTGATCAAAGCAAATATGACAGCATCGTCTGGAACCCAATCACTTATTATCCGGTACCGAAACCGTCGACCCAGGTAGGGCAGAAAGTTCTGGATAAAATTTTGAACTATACCAACACCGAAATGAAAGAAGCGATAGCGCAGCGTAAACCACTGGTTACCACCGCTGGGCCGCGTAGTCTGATTTTCCGTGGGGCCATTACCGGTGTAGATACCAGCAAAGAAGGGCTGCAATTCTATGAAGTGGTTCCTGTTGCATTAGTGGTTGCGGGGACGCAAATGGCTACAGGCCACCGTACCATGGATACTCGCCTCTATTTTGAAGGTGAGCTGATTGATGCAGCGACTAATAAACCGGTTATCAAAGTCGTTCGTCAGGGCGAAGGTAAAGACCTGAATAACGAAAGTACGCCAATGGCTTTCGAAAATATTAAACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAG", + "dna_sequence_length": 669, + "functions": [ + "lipoprotein" + ], + "id": "CDS_1418", + "location": [ + [ + "NC_000913", + 1502457, + "+", + 669 + ] + ], + "md5": "13e8fa0fc4398654ddd763f437f14bcb", + "parent_gene": "", + "protein_md5": "b0e55e17c63be92cf77373e9cd1ef18e", + "protein_translation": "MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285051" + ], + [ + "gene_synonym", + "ASAP:ABE-0285052" + ], + [ + "gene_synonym", + "ASAP:ABE-0285110" + ], + [ + "gene_synonym", + "ECK1425" + ], + [ + "gene_synonym", + "EcoGene:EG14359" + ], + [ + "gene_synonym", + "GeneID:4056028" + ], + [ + "gene_synonym", + "JW5227" + ], + [ + "gene_synonym", + "JW5961" + ], + [ + "gene_synonym", + "b4578" + ], + [ + "gene_synonym", + "insP" + ], + [ + "gene_synonym", + "orf1" + ], + [ + "gene_synonym", + "orfA" + ], + [ + "gene_synonym", + "tnpA" + ], + [ + "gene_synonym", + "yncK" + ] + ], + "dna_sequence": "ATGATACTTTGGTCTGTGAAAAAAGAAACCGATATCCGGCGTGGAAGGCATTGTGTTTTCCTGATGCATGTTCACCTGCTCTTTGTCACCAGATACCGACGCCAGATTTTTGACCATGACGCGACAGAAAAACTACGCACTTACTTTTCAAATGTATGTGCTGATTTTGAAGCTGAACTGGTTGAAATGGATGGCGAACCAGATCACGTCCATTTGTTAATTAACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGGGTAGGTGACTGCGACGAGATCGACCAGATATTGCATTCAGGTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAGCTGCGGAGGTGCGCCAATATCCGTCATCCGCCAATACATTGAACAACAGCAAACACCTGGTCAG", + "dna_sequence_length": 432, + "id": "CDS_1419", + "location": [ + [ + "NC_000913", + 1503649, + "-", + 432 + ] + ], + "md5": "3c63df6473020db18bc7ae17915972af", + "parent_gene": "", + "protein_md5": "68bcd2f0d8cfb5780beb48c9bc1e77e3", + "protein_translation": "MILWSVKKETDIRRGRHCVFLMHVHLLFVTRYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004778" + ], + [ + "gene_synonym", + "ECK1426" + ], + [ + "gene_synonym", + "EcoGene:EG13756" + ], + [ + "gene_synonym", + "GI:288551665" + ], + [ + "gene_synonym", + "GeneID:944942" + ], + [ + "gene_synonym", + "JW5228" + ], + [ + "gene_synonym", + "NP_415949.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76102" + ], + [ + "gene_synonym", + "b1432" + ], + [ + "gene_synonym", + "insQ" + ], + [ + "gene_synonym", + "orf2" + ], + [ + "gene_synonym", + "orfB" + ], + [ + "gene_synonym", + "tnpB" + ], + [ + "gene_synonym", + "ydcM" + ] + ], + "dna_sequence": "ATGAGGCGCTTCGCAGGCGCATGTCGTTTCGTTTTCAATCGTGCTCTGGCACGTCAGAATGAGAATCATGAGGCCGGTAATAAATACATCCCTTACGGGAAAATGGCTTCCTGGCTGGTTGAGTGGAAAAATGCCACTGAAACGCAATGGCTTAAAGATTCTCCCTCACAGCCATTGCAACAGTCACTGAAAGACCTTGAGCGGGCTTACAAAAACTTCTTCCGGAAGCGGGCTGCTTTTCCCCGATTCAAAAAGCGGGGACAGAATGATGCATTCCGCTACCCGCAGGGCGTTAAGCTCGATCAGGAAAACAGCCGTATTTTTCTGCCGAAACTGGGCTGGATGCGCTACCGGAACAGCCGTCAGGTCACGGGTGTTGTGAAAAATGTCACTGTCAGCCAGTCCTGCGGTAAGTGGTACATCAGTATTCAGACAGAAAGTGAAGTATCAACTCCGGTTCACCCTTCAGCATCAATGGTCGGGCTGGATGCTGGCGTGGCTAAACTCGCCACGCTGTCAGATGGCACAGTCTTTGAGCCTGTAAACAGTTTTCAGAAAAACCAGAAGAAGCTGGCGAGACTTCAGCGACAGTTAAGCCGCAAGGTCAAATTCAGCAACAACTGGCAAAAGCAGAAACGCAAAATACAGCGACTGCATTCCTGTATCGCAAATATCCGCAGGGACTACCTTCACAAAGTCACAACGGCCGTCAGCAAAAACCACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGA", + "dna_sequence_length": 1149, + "functions": [ + "IS609 transposase B" + ], + "id": "CDS_1420", + "location": [ + [ + "NC_000913", + 1503717, + "+", + 1149 + ] + ], + "md5": "81e2bc76b7f1da6a4e60bd0e3401e7ea", + "parent_gene": "", + "protein_md5": "fa5f21e6bf49b2c4f34ff0ab90a67afb", + "protein_translation": "MRRFAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKKLARLQRQLSRKVKFSNNWQKQKRKIQRLHSCIANIRRDYLHKVTTAVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLAYKQLWRGGQVLAVPPAYTSQRCAYCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQATA", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004780" + ], + [ + "gene_synonym", + "ECK1427" + ], + [ + "gene_synonym", + "EcoGene:EG13758" + ], + [ + "gene_synonym", + "GI:90111272" + ], + [ + "gene_synonym", + "GeneID:947247" + ], + [ + "gene_synonym", + "JW5229" + ], + [ + "gene_synonym", + "NP_415950.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76103" + ], + [ + "gene_synonym", + "b1433" + ], + [ + "gene_synonym", + "ydcO" + ] + ], + "dna_sequence": "ATGCGTCTGTTTTCTATTCCTCCACCCACGCTACTGGCGGGGTTTCTGGCGGTATTAATTGGCTACGCCAGTTCAGCGGCAATAATCTGGCAAGCAGCGATTGTCGCCGGAGCCACCACTGCACAAATCTCTGGCTGGATGACGGCGCTGGGGCTGGCAATGGGCGTCAGTACGCTGACTCTGACATTATGGTATCGCGTACCTGTTCTCACCGCATGGTCAACGCCTGGCGCGGCTTTGTTGGTCACCGGATTGCAGGGACTAACACTTAACGAAGCCATCGGCGTTTTTATTGTCACCAACGCGCTAATAGTCCTCTGCGGCATAACGGGACTCTTTGCTCGTCTGATGCGCATTATTCCGCACTCGCTTGCGGCGGCAATGCTTGCCGGGATTTTATTACGCTTTGGTTTACAGGCGTTTGCCAGTCTGGACGGTCAATTTACGTTGTGTGGAAGTATGTTGCTGGTATGGCTGGCAACCAAGGCCGTTGCGCCGCGCTATGCGGTAATTGCCGCGATGATTATTGGGATCGTGATCGTCATCGCGCAAGGTGACGTTGTCACAACTGATGTTGTCTTTAAACCCGTTCTCCCCACTTATATTACCCCTGATTTTTCGTTTGCTCACAGCCTGAGCGTTGCACTCCCCCTTTTTCTGGTGACGATGGCATCGCAAAACGCACCGGGTATCGCAGCAATGAAAGCAGCTGGATATTCGGCTCCTGTTTCGCCATTAATTGTATTTACTGGATTGCTGGCACTGGTTTTTTCCCCTTTCGGCGTTTATTCCGTCGGTATTGCGGCAATCACCGCGGCTATTTGCCAAAGCCCGGAAGCGCATCCGGATAAAGATCAACGTTGGCTGGCCGCTGCCGTTGCAGGCATTTTCTATTTGCTCGCAGGTCTGTTTGGTAGTGCCATTACCGGGATGATGGCTGCCCTGCCCGTAAGTTGGATCCAGATGCTGGCAGGTCTGGCGCTGTTAAGTACCATCGGCGGCAGTTTGTATCAGGCGCTGCATAATGAGCGTGAGCGAGACGCGGCGGTGGTGGCATTTCTGGTAACGGCAAGTGGATTGACGCTGGTCGGGATTGGTTCTGCGTTTTGGGGATTAATTGCCGGAGGCGTTTGTTACGTGGTGTTGAATTTAATCGCTGACAGAAACCGATATTGA", + "dna_sequence_length": 1176, + "functions": [ + "BenE family inner membrane putative transporter" + ], + "id": "CDS_1421", + "location": [ + [ + "NC_000913", + 1506080, + "-", + 1176 + ] + ], + "md5": "3baf8af99cb7e37675c3c680a6402f43", + "parent_gene": "", + "protein_md5": "6bf3ffefa1acecf76d71682b42456a71", + "protein_translation": "MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLTLNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPDFSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITGMMAALPVSWIQMLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCYVVLNLIADRNRY", + "protein_translation_length": 391, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004783" + ], + [ + "gene_synonym", + "ECK1428" + ], + [ + "gene_synonym", + "EcoGene:EG13757" + ], + [ + "gene_synonym", + "GI:16129393" + ], + [ + "gene_synonym", + "GeneID:946000" + ], + [ + "gene_synonym", + "JW1430" + ], + [ + "gene_synonym", + "NP_415951.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77626" + ], + [ + "gene_synonym", + "b1434" + ], + [ + "gene_synonym", + "ydcN" + ] + ], + "dna_sequence": "ATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACAGCAGGCGATGGTGATCACTTCGCTGTTTCCTTATGATCCACAACTCTGCTTTGAACACTTCTCGATTCAGATGGCATCTGGTGCAATAAGCGAATCGACGCCCCATGAGAAGGGGGTAATCGAACATGTCGTCGTCATTGATGGACAACTTGATCTGTGCGTTGATGGGGAATGGCAGACCCTTAATTGTGGGGAAGGCGTTCGATTTGCTGCAGACGTCACGCATATCTATCGTAATGGTGGGGAGCAAACCGTACATTTTCATTCCCTCATCCATTACCCGCGCAGTTAA", + "dna_sequence_length": 537, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1422", + "location": [ + [ + "NC_000913", + 1506172, + "+", + 537 + ] + ], + "md5": "ef05a74caf3b4acad94f876ee2ee4722", + "parent_gene": "", + "protein_md5": "2cd987586fc588c4ed931bb6c8fe179e", + "protein_translation": "MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004786" + ], + [ + "gene_synonym", + "ECK1429" + ], + [ + "gene_synonym", + "EcoGene:EG13759" + ], + [ + "gene_synonym", + "GI:90111273" + ], + [ + "gene_synonym", + "GeneID:945993" + ], + [ + "gene_synonym", + "JW1431" + ], + [ + "gene_synonym", + "NP_415952.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76104" + ], + [ + "gene_synonym", + "b1435" + ], + [ + "gene_synonym", + "ydcP" + ] + ], + "dna_sequence": "GTGACCGTATCTTCTCATCGACTTGAACTGTTAAGCCCGGCACGCGATGCCGCCATTGCCCGCGAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACATCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTCCACCGTGGTAGCACAGATTATTTTGTGAATGCCCGTAAAGGCGATATTGGCGCGTTCGATTCGCCGAAATTTATCGGCCTGCCGGTAGGCGAAGTAGTGAAAGTGGCGAAAGATCATCTCGATGTTGCCGTTACCGAGCCACTGGCAAATGGCGATGGCCTGAACGTGTTGATTAAACGTGAAGTCGTCGGTTTTCGTGCCAATACGGTCGAGAAAACCGGAGAAAATCAGTACCGCGTCTGGCCCAATGAAATGCCAGCAGATTTGCACAAAATTCGTCCACATCACCCACTAAACCGTAATCTTGATCATAACTGGCAGCAGGCACTGACAAAAACCTCCAGCGAACGTCGGGTGGCGGTAGACATTGAACTGGGCGGCTGGCAGGAACAACTGATTCTGACCCTCACCAGTGAAGAGGGTGTCAGCATCACGCATACGCTGGACGGGCAGTTCGACGAAGCCAATAACGCCGAAAAAGCAATGAACAATCTGAAGGATGGTCTGGCAAAACTGGGGCAAACCCTCTATTACGCCCGCGATGTGCAAATTAATTTGCCGGGGGCGCTGTTTGTACCAAACAGTCTGTTAAACCAGTTCCGCCGTGAAGCTGCTGACATGCTGGATGCTGCGCGTCTTGCCAGTTACCAGCGCGGCAGCCGTAAACCGGTTGCTGATCCTGCGCCGGTTTATCCGCAAACGCATCTGAGTTTCCTCGCGAACGTATACAACCAGAAAGCGCGTGAATTTTATCATCGCTATGGTGTGCAGCTGATTGACGCGGCGTATGAAGCACATGAAGAGAAGGGCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGCCCATGCGAGATGCACGTCATTGGCAAAATCAAAAATCACATACTGAAAATGCCGTTACCGGGAAGCGTAGTGGCATCCGTAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAA", + "dna_sequence_length": 1962, + "functions": [ + "putative peptidase" + ], + "id": "CDS_1423", + "location": [ + [ + "NC_000913", + 1506781, + "+", + 1962 + ] + ], + "md5": "56a309eeb654943ae8584f423c686370", + "parent_gene": "", + "protein_md5": "8acb4270b3fa36b43ad98299d05ab95d", + "protein_translation": "MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG", + "protein_translation_length": 653, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004789" + ], + [ + "gene_synonym", + "ECK1430" + ], + [ + "gene_synonym", + "EcoGene:EG14300" + ], + [ + "gene_synonym", + "GI:16129395" + ], + [ + "gene_synonym", + "GeneID:945990" + ], + [ + "gene_synonym", + "JW1432" + ], + [ + "gene_synonym", + "NP_415953.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64459" + ], + [ + "gene_synonym", + "b1436" + ], + [ + "gene_synonym", + "yncJ" + ] + ], + "dna_sequence": "ATGTTTACGAAGGCGTTATCGGTTGTCTTATTAACGTGTGCTCTGTTTTCAGGACAACTCATGGCAGGGCACAAAGGACATGAATTTGTGTGGGTAAAGAATGTGGATCATCAGCTGCGTCATGAAGCGGACAGCGATGAATTGCGTGCTGTGGCGGAAGAGTCGGCGGAAGGTTTGCGCGAGCATTTTTACTGGCAAAAATCGCGCAAACCAGAAGCGGGACAACGTTGA", + "dna_sequence_length": 231, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1424", + "location": [ + [ + "NC_000913", + 1509064, + "-", + 231 + ] + ], + "md5": "cbaaeea95b7ce15b7cdc9c4910ce0c0c", + "parent_gene": "", + "protein_md5": "e2b541f9c8097bb9eceabc94cdab3c45", + "protein_translation": "MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285053" + ], + [ + "gene_synonym", + "ECK1431" + ], + [ + "gene_synonym", + "EcoGene:EG14421" + ], + [ + "gene_synonym", + "GI:94541092" + ], + [ + "gene_synonym", + "GeneID:945989" + ], + [ + "gene_synonym", + "JW5230" + ], + [ + "gene_synonym", + "NP_415954.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76106" + ], + [ + "gene_synonym", + "b4532" + ], + [ + "gene_synonym", + "hicA" + ], + [ + "gene_synonym", + "yncN" + ] + ], + "dna_sequence": "GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAACAACTCGGTTTGAGTTAA", + "dna_sequence_length": 177, + "functions": [ + "mRNA interferase toxin of the HicAB toxin-antitoxin system" + ], + "id": "CDS_1425", + "location": [ + [ + "NC_000913", + 1509286, + "+", + 177 + ] + ], + "md5": "531e282eedfeddd1d67cd51de3ab9230", + "parent_gene": "", + "protein_md5": "465b7918caca175e1263e3281b0c1d17", + "protein_translation": "MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS", + "protein_translation_length": 58, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004796" + ], + [ + "gene_synonym", + "ECK1432" + ], + [ + "gene_synonym", + "EcoGene:EG13760" + ], + [ + "gene_synonym", + "GI:145698257" + ], + [ + "gene_synonym", + "GeneID:946001" + ], + [ + "gene_synonym", + "JW1433" + ], + [ + "gene_synonym", + "NP_415955.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67697" + ], + [ + "gene_synonym", + "b1438" + ], + [ + "gene_synonym", + "hicB" + ], + [ + "gene_synonym", + "ydcQ" + ] + ], + "dna_sequence": "ATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGATTACTCGCCTATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAA", + "dna_sequence_length": 417, + "functions": [ + "antitoxin for the HicAB toxin-antitoxin system" + ], + "id": "CDS_1426", + "location": [ + [ + "NC_000913", + 1509508, + "+", + 417 + ] + ], + "md5": "0a3625d9ea8fdbd5aa6f41f929eb6bd2", + "parent_gene": "", + "protein_md5": "c55ae963f2dc70de82e2caaa66c2c1b6", + "protein_translation": "MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004800" + ], + [ + "gene_synonym", + "ECK1433" + ], + [ + "gene_synonym", + "EcoGene:EG13761" + ], + [ + "gene_synonym", + "GI:16129398" + ], + [ + "gene_synonym", + "GeneID:946004" + ], + [ + "gene_synonym", + "JW1434" + ], + [ + "gene_synonym", + "NP_415956.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77730" + ], + [ + "gene_synonym", + "b1439" + ], + [ + "gene_synonym", + "ydcR" + ] + ], + "dna_sequence": "ATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGTCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCAGTCGGGTTATTACGTTGCGCCACAGGCAATAAAAATGCCGAAAGCGCCAGTCATTCCAGTCACTCGAGATGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTTCCCGACCCGCGACTTTTCCCCCTCCAACAACTAAACCGCTCGCTGGCGCAGGTAAGCAAAACCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAACCTCAGTTTGCAAGCGGTAACTGAACCGGGCGATTGGGTGATAGTAGAGAATCCTTGTTTCTACGGTGCGTTGCAGGCGCTGGAGCGGCTACGGCTGAAGGCGTTATCGGTGGCGACGGATGTTAAAGAAGGGATAGATCTTCAGGCGCTGGAACTGGCGTTGCAGGAGTATCCGGTGAAAGCGTGCTGGCTGATGACTAATAGCCAGAATCCACTCGGATTTACCTTAACGCCGCAAAAAAAAGCACAACTGGTGGCGTTGCTCAATCAGTACAACGTAACGCTGATTGAAGATGACGTTTACAGCGAACTTTATTTTGGACGGGAAAAACCGCTGCCTGCGAAAGCGTGGGATCGCCACGATGGCGTTTTGCATTGCTCTTCGTTTTCGAAATGTCTGGTGCCTGGTTTTCGTATTGGTTGGGTCGCCGCCGGAAAACATGCACGTAAAATTCAACGCTTGCAGTTGATGAGTACGCTTTCCACCAGCTCACCGATGCAACTTGCGCTGGTGGATTACCTTTCCACGCGCCGATACGACGCCCATCTTCGTCGCCTGCGTCGCCAGCTTGCGGAACGTAAACAACGTGCCTGGCAGGCACTGCTGCGTTATCTGCCTGCGGAAGTGAAAATTCATCATAATGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAA", + "dna_sequence_length": 1407, + "functions": [ + "putative DNA-binding transcriptional regulator and putative aminotransferase" + ], + "id": "CDS_1427", + "location": [ + [ + "NC_000913", + 1510003, + "+", + 1407 + ] + ], + "md5": "17b914dde5700325d3763b862bf74d55", + "parent_gene": "", + "protein_md5": "df3b5056d744635fb7de4674fb8adb8d", + "protein_translation": "MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQERL", + "protein_translation_length": 468, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004803" + ], + [ + "gene_synonym", + "ECK1434" + ], + [ + "gene_synonym", + "EcoGene:EG13762" + ], + [ + "gene_synonym", + "GI:16129399" + ], + [ + "gene_synonym", + "GeneID:946005" + ], + [ + "gene_synonym", + "JW1435" + ], + [ + "gene_synonym", + "NP_415957.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76108" + ], + [ + "gene_synonym", + "b1440" + ], + [ + "gene_synonym", + "ydcS" + ] + ], + "dna_sequence": "ATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGCATCCGGCGATGCCTCGCTGCGTTTGATTATGGGTAAACGCGTGCAGCCGATTAATACCGCATTGATTCCCAACTGGAAAACGCTCGATCCGCGCGTGGTTAAAGGCGACTGGTTTAATGTTGGCGGCAAAGTTTACGGCACACCTTACCAATGGGGGCCGAACCTGCTGATGTACAACACTAAAACCTTCCCGACGCCGCCGGATAGCTGGCAAGTGGTTTTTGTTGAGCAAAATCTGCCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGTGGCGGCCTGGTTTGGCTCGTTACCGGTAGTGCCGGAAGGGTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTACATTGCCATTATGGGCGGTCGCTAA", + "dna_sequence_length": 1146, + "functions": [ + "putative ABC transporter periplasmic binding protein" + ], + "id": "CDS_1428", + "location": [ + [ + "NC_000913", + 1511654, + "+", + 1146 + ] + ], + "md5": "cb230dbf5d89de88c44c2e43b5ddb9f1", + "parent_gene": "", + "protein_md5": "be40be0d6a6bf3ab8820e6453732f25e", + "protein_translation": "MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQFEKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKTLDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKGRVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTTVQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAYKWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAEGGKFVPYSRWTQDYIAIMGGR", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004805" + ], + [ + "gene_synonym", + "ECK1435" + ], + [ + "gene_synonym", + "EcoGene:EG13763" + ], + [ + "gene_synonym", + "GI:16129400" + ], + [ + "gene_synonym", + "GeneID:946007" + ], + [ + "gene_synonym", + "JW1436" + ], + [ + "gene_synonym", + "NP_415958.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77795" + ], + [ + "gene_synonym", + "b1441" + ], + [ + "gene_synonym", + "ydcT" + ] + ], + "dna_sequence": "ATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATGCTGGGGCCGTCCGGCTCCGGCAAAACCACCTGCCTGCGCCTGATTGCTGGCTTCGAACAGCTTTCCGGCGGGGCTATCTCTATCTTTGGTAAACCCGCCAGCAATCTGCCACCGTGGGAGCGGGACGTGAATACTGTCTTTCAGGACTACGCGCTATTTCCGCATATGTCGATTCTTGACAATGTCGCCTATGGGCTGATGGTCAAAGGCGTGAATAAAAAGCAGCGGCACGCAATGGCGCAAGAGGCGCTGGAGAAAGTGGCGTTGGGGTTTGTACATCAACGTAAACCGTCACAACTTTCTGGTGGTCAGCGCCAGCGGGTTGCTATCGCCAGAGCATTGGTGAATGAACCGCGCGTATTGCTGTTGGATGAACCGCTCGGCGCACTGGATCTCAAATTGCGTGAGCAGATGCAGCTGGAACTGAAAAAACTGCAACAGTCTCTCGGTATCACTTTTATCTTCGTTACCCACGATCAGGGCGAAGCGTTATCGATGTCCGATCGTGTGGCGGTTTTCAATAATGGACGCATTGAGCAGGTCGATTCCCCGCGCGATCTCTATATGCGCCCGCGCACGCCGTTTGTTGCCGGGTTCGTTGGTACATCGAATGTTTTTGATGGACTGATGGCAGAGAAACTTTGTGGCATGACGGGAAGCTTCGCCCTGCGACCGGAACATATCCGCCTCAACACCCCTGGTGAACTGCAGGCCAATGGCACGATCCAGGCGGTGCAATATCAGGGCGCGGCAACTCGTTTTGAACTGAAATTGAACGGCGGTGAAAAACTGCTTGTGAGTCAGGCCAATATGACAGGCGAAGAACTGCCTGCCACGCTCACGCCCGGACAACAGGTGATGGTTTCCTGGTCGCGTGATGTGATGGTGCCGCTGGTTGAGGAGAGGTGA", + "dna_sequence_length": 1014, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_1429", + "location": [ + [ + "NC_000913", + 1512817, + "+", + 1014 + ] + ], + "md5": "e36faf85db8f76cc8837136a889a1ab6", + "parent_gene": "", + "protein_md5": "9c19ea7493ac852dc7ffe972904a7ab9", + "protein_translation": "MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNVFDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGTIQAVQYQGAATRFELKLNGGEKLLVSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004807" + ], + [ + "gene_synonym", + "ECK1436" + ], + [ + "gene_synonym", + "EcoGene:EG13764" + ], + [ + "gene_synonym", + "GI:16129401" + ], + [ + "gene_synonym", + "GeneID:945976" + ], + [ + "gene_synonym", + "JW1437" + ], + [ + "gene_synonym", + "NP_415959.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77156" + ], + [ + "gene_synonym", + "b1442" + ], + [ + "gene_synonym", + "ydcU" + ] + ], + "dna_sequence": "ATGGCGATGAATGTATTGCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATGGCGCGCTATACCAGCGGGAAAATGAAAGCGTTTTTTTATATTGCGGTAATGTTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCCTGGACGTTATTGCTGGCAAAAGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGA", + "dna_sequence_length": 942, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_1430", + "location": [ + [ + "NC_000913", + 1513831, + "+", + 942 + ] + ], + "md5": "3016b414a954e23b8adc1928fe088e33", + "parent_gene": "", + "protein_md5": "76c746d720ffe64193d2b38cf28c3c52", + "protein_translation": "MAMNVLQSPSRPGLGKVSGFFWHNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFDDFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKMKAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTLSTSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPGIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIILIALYLAFVKRLGAFDAL", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004809" + ], + [ + "gene_synonym", + "ECK1437" + ], + [ + "gene_synonym", + "EcoGene:EG13765" + ], + [ + "gene_synonym", + "GI:16129402" + ], + [ + "gene_synonym", + "GeneID:945903" + ], + [ + "gene_synonym", + "JW1438" + ], + [ + "gene_synonym", + "NP_415960.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR9" + ], + [ + "gene_synonym", + "b1443" + ], + [ + "gene_synonym", + "ydcV" + ] + ], + "dna_sequence": "ATGCACTCTGAACGCGCACCGTTTTTCCTCAAACTGGCGGCCTGGGGCGGCGTTGTTTTCCTACATTTTCCCATCCTGATAATCGCCGCCTATGCGTTTAACACTGAAGATGCGGCGTTTAGTTTTCCACCGCAGGGCCTGACGCTGCGCTGGTTTAGCGTGGCAGCACAGCGTAGTGATATTCTTGATGCCGTGACACTGTCACTTAAAGTGGCGGCGCTGGCGACATTAATTGCGCTGGTGTTAGGGACGCTGGCAGCTGCCGCGCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGTGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTGCCGAATCTCAGTTCGGCGTTACTGGCAGGAGGAATGCTGGCGTTTGCCTTGTCGTTCGATGAAATCATCGTTACGACCTTTACGGCAGGTCATGAACGAACGTTACCGTTGTGGTTGCTCAATCAGCTTGGGCGACCGCGTGATGTACCGGTAACTAACGTGGTGGCACTGCTGGTTATGTTGGTAACAACCTTGCCGATCCTGGGGGCCTGGTGGCTAACCCGCGAAGGCGACAATGGTCAATAA", + "dna_sequence_length": 795, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_1431", + "location": [ + [ + "NC_000913", + 1514762, + "+", + 795 + ] + ], + "md5": "c0aaa6fe9389b6e7a5e8cc542f53934b", + "parent_gene": "", + "protein_md5": "00b301637e93d58de57dbf8bb29e9026", + "protein_translation": "MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSDILDAVTLSLKVAALATLIALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLALLTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRYVVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVALLVMLVTTLPILGAWWLTREGDNGQ", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004813" + ], + [ + "gene_synonym", + "ECK1438" + ], + [ + "gene_synonym", + "EcoGene:EG13766" + ], + [ + "gene_synonym", + "GI:16129403" + ], + [ + "gene_synonym", + "GeneID:945876" + ], + [ + "gene_synonym", + "JW1439" + ], + [ + "gene_synonym", + "NP_415961.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77674" + ], + [ + "gene_synonym", + "b1444" + ], + [ + "gene_synonym", + "patD" + ], + [ + "gene_synonym", + "prr" + ], + [ + "gene_synonym", + "ydcW" + ] + ], + "dna_sequence": "ATGCAACATAAGTTACTGATTAACGGAGAACTGGTTAGCGGCGAAGGGGAAAAACAGCCTGTCTATAATCCGGCAACGGGGGACGTTTTACTGGAAATTGCCGAGGCATCCGCAGAGCAGGTCGATGCTGCTGTGCGCGCGGCAGATGCAGCATTTGCCGAATGGGGGCAAACCACGCCGAAAGTGCGTGCGGAATGTCTGCTGAAACTGGCTGATGTTATCGAAGAAAATGGTCAGGTTTTTGCCGAACTGGAGTCCCGTAATTGTGGCAAACCGCTGCATAGTGCGTTCAATGATGAAATCCCGGCGATTGTCGATGTTTTTCGCTTTTTCGCGGGTGCGGCGCGCTGTCTGAATGGTCTGGCGGCAGGTGAATATCTTGAAGGTCATACTTCGATGATCCGTCGCGATCCGTTGGGGGTCGTGGCTTCTATCGCACCGTGGAATTATCCGCTGATGATGGCCGCGTGGAAACTTGCTCCGGCGCTGGCGGCAGGGAACTGCGTAGTGCTTAAACCATCAGAAATTACCCCGCTGACCGCGTTGAAGTTGGCAGAGCTGGCGAAAGATATCTTCCCGGCAGGCGTGATTAACATACTGTTTGGCAGAGGCAAAACGGTGGGTGATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACATCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTTGATGATGCGGATATTGAAGCAGTGGTCGAAGGTGTACGTACATTTGGCTATTACAATGCTGGACAGGATTGTACTGCGGCTTGTCGGATCTACGCGCAAAAAGGCATTTACGATACGCTGGTGGAAAAACTGGGTGCTGCGGTGGCAACGTTAAAATCTGGTGCGCCAGATGACGAGTCTACGGAGCTTGGACCTTTAAGCTCGCTGGCGCATCTCGAACGCGTCGGCAAGGCAGTAGAAGAGGCGAAAGCGACAGGGCACATCAAAGTGATCACTGGCGGTGAAAAGCGCAAGGGTAATGGCTATTACTATGCGCCGACGCTGCTGGCTGGCGCATTACAGGACGATGCCATCGTGCAAAAAGAGGTATTTGGTCCAGTAGTGAGTGTTACGCCCTTCGACAACGAAGAACAGGTGGTGAACTGGGCGAATGACAGCCAGTACGGACTTGCATCTTCGGTATGGACGAAAGATGTGGGCAGGGCGCATCGCGTCAGCGCACGGCTGCAATATGGTTGTACCTGGGTCAATACCCATTTCATGCTGGTAAGTGAAATGCCGCACGGTGGGCAGAAACTTTCTGGTTACGGCAAGGATATGTCACTTTATGGGCTGGAGGATTACACCGTCGTCCGCCACGTCATGGTTAAACATTAA", + "dna_sequence_length": 1425, + "functions": [ + "gamma-aminobutyraldehyde dehydrogenase" + ], + "id": "CDS_1432", + "location": [ + [ + "NC_000913", + 1515578, + "+", + 1425 + ] + ], + "md5": "49262153fd209f094d7c1097d275115b", + "parent_gene": "", + "protein_md5": "abe2547b09e9cff8bf838cbd1ce4e266", + "protein_translation": "MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4408" + ], + [ + "gene_synonym", + "EcoGene:EG14394" + ], + [ + "gene_synonym", + "GI:145698258" + ], + [ + "gene_synonym", + "GeneID:5061503" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A615" + ], + [ + "gene_synonym", + "YP_001165318.1" + ], + [ + "gene_synonym", + "b4598" + ], + [ + "gene_synonym", + "yncL" + ] + ], + "dna_sequence": "ATGAATGTTTCCAGTAGAACTGTAGTACTGATAAATTTCTTTGCTGCTGTTGGTTTGTTTACTCTTATCTCTATGAGATTTGGCTGGTTTATTTGA", + "dna_sequence_length": 96, + "functions": [ + "stress-induced small inner membrane enterobacterial protein" + ], + "id": "CDS_1433", + "location": [ + [ + "NC_000913", + 1517194, + "-", + 96 + ] + ], + "md5": "643c7a9197ee36c916368dba1e74dec8", + "parent_gene": "", + "protein_md5": "d92b452d2aa3b088db0e63924c1260c0", + "protein_translation": "MNVSSRTVVLINFFAAVGLFTLISMRFGWFI", + "protein_translation_length": 31, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004818" + ], + [ + "gene_synonym", + "ECK1439" + ], + [ + "gene_synonym", + "EcoGene:EG13767" + ], + [ + "gene_synonym", + "GI:90111274" + ], + [ + "gene_synonym", + "GeneID:945936" + ], + [ + "gene_synonym", + "JW5232" + ], + [ + "gene_synonym", + "NP_415962.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64453" + ], + [ + "gene_synonym", + "b1445" + ], + [ + "gene_synonym", + "ydcX" + ] + ], + "dna_sequence": "ATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAA", + "dna_sequence_length": 174, + "functions": [ + "DUF2566 family protein" + ], + "id": "CDS_1434", + "location": [ + [ + "NC_000913", + 1517389, + "+", + 174 + ] + ], + "md5": "fb8f87e582da2bfd30faf9479b58124f", + "parent_gene": "", + "protein_md5": "9e97615d3b36973dd8d1c14cc4ebc102", + "protein_translation": "MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFSLF", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004821" + ], + [ + "gene_synonym", + "ECK1440" + ], + [ + "gene_synonym", + "EcoGene:EG13768" + ], + [ + "gene_synonym", + "GI:16129405" + ], + [ + "gene_synonym", + "GeneID:945916" + ], + [ + "gene_synonym", + "JW1441" + ], + [ + "gene_synonym", + "NP_415963.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64455" + ], + [ + "gene_synonym", + "b1446" + ], + [ + "gene_synonym", + "ydcY" + ] + ], + "dna_sequence": "ATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCAGCAACGTCTGCGCACAGCGATCGCCCATCACGGTCGCAAGCATAAAGAAGATATGGAAGCGCGCCACGAACAGTTAACCAAAGGCGGCACCATCCTCTGA", + "dna_sequence_length": 234, + "functions": [ + "DUF2526 family protein" + ], + "id": "CDS_1435", + "location": [ + [ + "NC_000913", + 1517648, + "+", + 234 + ] + ], + "md5": "b5a9ee7afd640566c47b22d45be9dd4e", + "parent_gene": "", + "protein_md5": "8de8badeaf39e2e16977a0c02fb92745", + "protein_translation": "MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004823" + ], + [ + "gene_synonym", + "ECK1441" + ], + [ + "gene_synonym", + "EcoGene:EG13769" + ], + [ + "gene_synonym", + "GI:16129406" + ], + [ + "gene_synonym", + "GeneID:946008" + ], + [ + "gene_synonym", + "JW1442" + ], + [ + "gene_synonym", + "NP_415964.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76111" + ], + [ + "gene_synonym", + "b1447" + ], + [ + "gene_synonym", + "ydcZ" + ] + ], + "dna_sequence": "ATGAATCAGTCGCTCACCCTTGCTTTTTTGATTGCCGCCGGAATTGGTCTGGTTGTCCAGAACACGCTGATGGTGCGCATCACCCAGACCTCCTCTACCATTCTCATCGCCATGTTGCTGAACTCACTGGTGGGGATTGTGCTCTTTGTTTCTATTTTATGGTTTAAACAAGGCATGGCGGGGTTTGGCGAACTGGTGTCCAGCGTGCGCTGGTGGACACTTATACCTGGCTTGCTGGGATCGTTTTTTGTCTTCGCCAGTATCAGCGGATATCAGAATGTGGGAGCGGCGACAACTATTGCTGTACTGGTCGCCAGTCAGCTGATTGGCGGTCTGATGCTGGATATCTTCCGCAGTCATGGCGTACCACTACGGGCGTTGTTCGGCCCAATTTGTGGCGCAATTTTACTTGTGGTTGGCGCCTGGTTGGTAGCCAGACGCTCATTTTAA", + "dna_sequence_length": 450, + "functions": [ + "DUF606 family inner membrane protein" + ], + "id": "CDS_1436", + "location": [ + [ + "NC_000913", + 1518331, + "-", + 450 + ] + ], + "md5": "bc1eeea2849b8415d587fd242d7c0457", + "parent_gene": "", + "protein_md5": "ea362bc405643937c211161733323f08", + "protein_translation": "MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLVGIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004827" + ], + [ + "gene_synonym", + "ECK1442" + ], + [ + "gene_synonym", + "EcoGene:EG13770" + ], + [ + "gene_synonym", + "GI:16129407" + ], + [ + "gene_synonym", + "GeneID:946010" + ], + [ + "gene_synonym", + "JW5233" + ], + [ + "gene_synonym", + "NP_415965.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76112" + ], + [ + "gene_synonym", + "b1448" + ], + [ + "gene_synonym", + "mnaT" + ], + [ + "gene_synonym", + "yncA" + ] + ], + "dna_sequence": "ATGTCCATCCGTTTTGCCCGCAAAGCCGACTGTGCTGCCATTGCGGAAATTTATAACCACGCCGTGTTGTATACGGCGGCTATCTGGAATGACCAAACGGTGGATGCTGATAACCGCATTGCCTGGTTTGAAGCGCGGACTTTAGCAGGTTATCCAGTGCTGGTGAGCGAGGAAAACGGCGTAGTGACGGGATATGCCTCGTTTGGCGACTGGCGTAGTTTCGATGGTTTTCGCCATACCGTGGAACATTCGGTTTATGTCCATCCCGATCATCAGGGCAAAGGTCTGGGGCGTAAATTGTTAAGCCGATTGATTGATGAAGCGCGGGATTGCGGGAAGCATGTCATGGTCGCCGGGATCGAATCGCAAAATCAGGCCTCGCTGCATCTCCACCAGTCGCTGGGATTTGTCGTCACCGCGCAAATGCCGCAGGTAGGCACTAAATTTGGTCGTTGGCTGGATCTGACATTTATGCAGTTGCAACTCGACGAGCGCACTGAACCGGACGCGATTGGATGA", + "dna_sequence_length": 519, + "functions": [ + "methionine N-acyltransferase", + "L-amino acid N-acyltransferase" + ], + "id": "CDS_1437", + "location": [ + [ + "NC_000913", + 1518846, + "-", + 519 + ] + ], + "md5": "a7f27af68bdc3df280a3c191e96bac89", + "parent_gene": "", + "protein_md5": "02f42b4dbeb72169c67d10f922543823", + "protein_translation": "MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTLAGYPVLVSEENGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004834" + ], + [ + "gene_synonym", + "ECK1443" + ], + [ + "gene_synonym", + "EcoGene:EG13772" + ], + [ + "gene_synonym", + "GI:226524714" + ], + [ + "gene_synonym", + "GeneID:946012" + ], + [ + "gene_synonym", + "JW5907" + ], + [ + "gene_synonym", + "NP_415966.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76113" + ], + [ + "gene_synonym", + "b1449" + ], + [ + "gene_synonym", + "curA" + ], + [ + "gene_synonym", + "yncB" + ] + ], + "dna_sequence": "ATGGGGCAACAAAAGCAGCGTAATCGACGTTGGGTTCTGGCCTCGCGTCCACATGGCGCACCTGTTCCGGAGAATTTCCGTCTTGAAGAAGATGATGTCGCCACACCGGGTGAAGGACAGGTGTTACTGCGCACAGTTTATTTGTCCCTGGACCCGTATATGCGTGGACGTATGAGCGATGAGCCATCTTATTCACCGCCTGTTGATATTGGCGGCGTGATGGTCGGCGGTACGGTGAGCCGTGTCGTGGAGTCGAATCATCCTGATTATCAGTCTGGCGACTGGGTGCTGGGCTACAGTGGATGGCAAGACTATGACATATCCAGTGGTGATGATCTGGTGAAACTTGGCGATCATCCGCAAAATCCATCGTGGTCGCTGGGTGTGCTAGGGATGCCAGGCTTTACCGCTTATATGGGCCTACTGGATATCGGTCAGCCTAAAGAGGGCGAAACGTTGGTGGTAGCTGCGGCGACAGGACCAGTGGGGGCGACGGTGGGGCAAATCGGCAAACTTAAAGGTTGCAGAGTGGTGGGGGTAGCCGGTGGCGCGGAAAAATGCCGCCATGCTACCGAGGTGTTAGGCTTCGATGTTTGTCTTGATCACCACGCGGATGATTTTGCCGAACAACTGGCGAAAGCGTGCCCAAAAGGTATTGATATCTATTATGAAAACGTGGGCGGTAAGGTATTCGATGCGGTGCTACCGTTACTTAATACATCTGCGCGCATTCCCGTCTGCGGATTAGTGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAA", + "dna_sequence_length": 1038, + "functions": [ + "curcumin/dihydrocurcumin reductase, NADPH-dependent" + ], + "id": "CDS_1438", + "location": [ + [ + "NC_000913", + 1519027, + "+", + 1038 + ] + ], + "md5": "a78cc5d9f4063e40ce2feceee36f4a11", + "parent_gene": "", + "protein_md5": "48779a404907341c0defb4b4b896c2cf", + "protein_translation": "MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVAGDD", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004837" + ], + [ + "gene_synonym", + "ECK1444" + ], + [ + "gene_synonym", + "EcoGene:EG13773" + ], + [ + "gene_synonym", + "GI:90111276" + ], + [ + "gene_synonym", + "GeneID:946014" + ], + [ + "gene_synonym", + "JW1445" + ], + [ + "gene_synonym", + "NP_415967.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76114" + ], + [ + "gene_synonym", + "b1450" + ], + [ + "gene_synonym", + "mcbR" + ], + [ + "gene_synonym", + "yncC" + ] + ], + "dna_sequence": "ATGCCTGGAACGGGAAAAATGAAACATGTCAGTTTGACTCTGCAGGTTGAGAACGACCTGAAACATCAGCTTAGTATTGGCGCATTAAAACCTGGCGCACGCCTGATTACTAAAAATCTGGCGGAGCAATTAGGTATGAGTATTACACCTGTGCGTGAAGCATTATTACGTCTGGTTTCGGTGAATGCGCTTTCTGTCGCACCTGCACAAGCATTTACAGTTCCGGAAGTGGGGAAACGTCAATTAGACGAAATCAATCGGATCCGCTACGAACTGGAATTAATGGCAGTTGCTCTGGCTGTTGAAAACCTCACCCCGCAAGACCTTGCGGAACTCCAGGAATTGCTCGAGAAATTACAGCAGGCGCAAGAAAAGGGCGACATGGAACAAATCATTAATGTAAACAGGCTATTTCGCTTAGCGATTTATCATCGCTCAAATATGCCCATCCTGTGTGAGATGATTGAGCAACTGTGGGTCAGGATGGGGCCTGGTTTACATTATCTCTATGAAGCGATTAATCCAGCGGAATTACGGGAGCATATAGAAAACTATCATCTGTTACTCGCTGCGTTAAAAGCAAAAGACAAAGAGGGATGCAGACATTGTCTTGCTGAAATTATGCAACAAAATATTGCTATTTTATACCAGCAATACAATCGTTAA", + "dna_sequence_length": 666, + "functions": [ + "colanic acid and biofilm gene transcriptional regulator, MqsR-controlled" + ], + "id": "CDS_1439", + "location": [ + [ + "NC_000913", + 1520262, + "+", + 666 + ] + ], + "md5": "3b4b4bfc86eaae5c5440e62dd34e173a", + "parent_gene": "", + "protein_md5": "f19f560a6118383b5f6b27ac4e6d867b", + "protein_translation": "MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004839" + ], + [ + "gene_synonym", + "ECK1445" + ], + [ + "gene_synonym", + "EcoGene:EG13774" + ], + [ + "gene_synonym", + "GI:16129410" + ], + [ + "gene_synonym", + "GeneID:946015" + ], + [ + "gene_synonym", + "JW1446" + ], + [ + "gene_synonym", + "NP_415968.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76115" + ], + [ + "gene_synonym", + "b1451" + ], + [ + "gene_synonym", + "yncD" + ] + ], + "dna_sequence": "ATGAAGATTTTTTCCGTCCGACAGACCGTTTTGCCCGCACTGCTTGTCCTTTCCCCCGTTGTTTTTGCCGCTGATGAACAGACTATGATTGTCAGTGCCGCACCGCAGGTGGTTTCAGAACTGGATACCCCAGCAGCAGTAAGCGTGGTGGATGGCGAGGAGATGCGCCTGGCAACACCGCGCATTAACTTGTCCGAATCACTGACCGGCGTGCCTGGTTTGCAGGTACAAAACCGGCAGAACTATGCGCAAGATTTACAGCTGTCGATTCGCGGATTTGGCTCCCGCTCCACTTACGGTATTCGCGGTATTCGCCTGTATGTGGACGGTATTCCCGCCACCATGCCCGACGGGCAAGGGCAAACATCCAACATCGATTTAAGCAGTGTGCAAAATGTGGAAGTGCTGCGTGGCCCCTTCTCTGCCCTGTATGGCAACGCGTCTGGTGGGGTAATGAATGTCACCACCCAGACCGGACAACAGCCACCAACCATTGAAGCCAGTAGTTACTACGGCAGTTTTGGCAGCTGGCGCTATGGGCTGAAAGCAACGGGCGCAACGGGAGACGGCACACAGCCTGGCGATGTCGATTACACCGTCTCAACCACGCGTTTTACGACCCACGGCTATCGTGACCATAGTGGCGCACAGAAAAATTTAGCCAATGCCAAACTGGGCGTACGCATTGATGAAGCCAGCAAATTAAGTCTGATTTTCAATAGTGTGGATATCAAAGCAGATGACCCAGGTGGGCTAACCAAAGCAGAATGGAAGGCTAATCCACAACAAGCGCCTCGTGCAGAACAGTACGACACGCGAAAAACCATCAAGCAAACTCAGGCTGGGTTGCGCTATGAGCGTAGCCTGAGTTCGCGGGATGATATGAGTGTGATGATGTATGCCGGAGAGCGAGAAACGACCCAGTACCAGTCAATACCCATGGCACCACAACTTAACCCGTCACATGCGGGCGGCGTGATTACCCTGCAACGCCATTACCAGGGAATAGACAGCCGCTGGACACACCGTGGTGAACTGGGCGTTCCGGTCACGTTCACTACCGGCCTGAACTACGAAAACATGAGTGAAAACCGCAAGGGCTACAATAACTTCCGCCTGAATAGCGGCATGCCGGAGTACGGGCAAAAAGGTGAGTTGCGTCGCGACGAACGCAATCTGATGTGGAACATCGATCCCTATTTACAGACGCAGTGGCAGCTGAGCGAAAAACTGTCGCTGGATGCTGGCGTGCGCTACAGCTCCGTGTGGTTTGATTCCAACGACCATTACGTTACTCCGGGTAACGGCGATGACAGCGGTGATGCCAGTTATCATAAATGGCTACCTGCCGGTTCGTTAAAATATGCAATGACCGATGCCTGGAATATCTATCTGGCAGCCGGGCGAGGTTTTGAAACGCCGACGATTAATGAGCTGTCTTATCGTGCTGATGGGCAAAGCGGTATGAACTTAGGTTTAAAACCATCCACCAACGATACAATTGAGATCGGCAGTAAAACGCGTATTGGTGATGGGCTGCTTAGTCTCGCATTGTTTCAGACCGACACTGATGATGAAATTGTTGTCGATAGCAGTAGCGGTGGGCGTACGACTTACAAAAATGCCGGAAAGACCCGTCGTCAAGGCGCTGAACTGGCATGGGATCAACGTTTCGCAGGAGATTTTCGCGTAAACGCGTCCTGGACCTGGCTTGATGCGACCTATCGCAGCAATGTTTGCAATGAACAGGATTGTAACGGTAATCGGATGCCAGGGATCGCCCGTAATATGGGCTTTGCGTCGATAGGTTATGTACCGGAAGATGGTTGGTATGCAGGCACGGAAGCGCGTTATATGGGCGATATTATGGCAGATGATGAAAATACGGCAAAAGCGCCGTCTTATACTCTCGTCGGCTTATTCACCGGGTATAAATACAATTACCACAATTTAACTGTGGATTTATTTGGTCGTGTCGATAATTTATTCGATAAAGAATACGTTGGTTCTGTCATTGTCAATGAGTCAAACGGGCGATATTACGAACCTTCGCCCGGACGAAATTATGGTGTCGGCATGAATATTGCGTGGAGATTTGAGTAA", + "dna_sequence_length": 2103, + "functions": [ + "putative iron outer membrane transporter" + ], + "id": "CDS_1440", + "location": [ + [ + "NC_000913", + 1523065, + "-", + 2103 + ] + ], + "md5": "bf31f8f162003790ff5822fa98fdd6ab", + "parent_gene": "", + "protein_md5": "9e74e28f36a2aa0f40f2c332e641a72d", + "protein_translation": "MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE", + "protein_translation_length": 700, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004843" + ], + [ + "gene_synonym", + "ECK1446" + ], + [ + "gene_synonym", + "EcoGene:EG13775" + ], + [ + "gene_synonym", + "GI:16129411" + ], + [ + "gene_synonym", + "GeneID:946006" + ], + [ + "gene_synonym", + "JW1447" + ], + [ + "gene_synonym", + "NP_415969.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76116" + ], + [ + "gene_synonym", + "b1452" + ], + [ + "gene_synonym", + "yncE" + ] + ], + "dna_sequence": "ATGCATTTACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAATGGCTTATAGCCAGCAAGAAAACGCGCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGATAGATGCCAAAACGGGCGAAGTGAAAGGCCGTCTGGTGCTGGATGATCGTAAGCGCACGGAAGAGGTGCGCCCGCTGCAACCGCGTGAGCTGGTAGCTGACGATGCCACGAACACCGTTTACATCAGTGGTATTGGTAAAGAGAGCGTGATTTGGGTCGTTGATGGCGGGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAGTACCGGTCTGGCGCTGGATAGCGAAGGCAAACGTCTTTACACCACTAACGCTGACGGCGAATTGATTACCATCGACACCGCCGACAATAAAATCCTCAGCCGTAAAAAGCTGCTGGATGACGGCAAAGAGCACTTCTTTATCAACATTAGCCTTGATACCGCCAGGCAGCGTGCATTTATCACCGATTCTAAAGCCGCAGAAGTGTTAGTGGTCGATACCCGTAATGGCAATATTCTGGCGAAGGTTGCGGCACCGGAATCACTGGCTGTGCTGTTTAACCCCGCGCGTAATGAAGCCTACGTAACGCATCGTCAGGCAGGTAAAGTCAGTGTGATTGACGCGAAAAGCTATAAAGTGGTGAAAACGTTCGATACGCCGACTCATCCAAACAGCCTGGCGCTGTCTGCCGATGGCAAAACGCTGTATGTCAGTGTGAAACAAAAATCCACTAAACAGCAGGAAGCTACCCAGCCAGACGATGTGATTCGTATTGCGCTGTAA", + "dna_sequence_length": 1062, + "functions": [ + "ATP-binding protein, periplasmic, function unknown" + ], + "id": "CDS_1441", + "location": [ + [ + "NC_000913", + 1523307, + "+", + 1062 + ] + ], + "md5": "d8191a7355233d34cf2bc167d752c16c", + "parent_gene": "", + "protein_md5": "fd3ba7bceb467a0105a3d00a8dd4a8e9", + "protein_translation": "MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004845" + ], + [ + "gene_synonym", + "ECK1447" + ], + [ + "gene_synonym", + "EcoGene:EG13776" + ], + [ + "gene_synonym", + "GI:90111277" + ], + [ + "gene_synonym", + "GeneID:946019" + ], + [ + "gene_synonym", + "JW5234" + ], + [ + "gene_synonym", + "NP_415970.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77610" + ], + [ + "gene_synonym", + "ansP" + ], + [ + "gene_synonym", + "b1453" + ], + [ + "gene_synonym", + "yncF" + ] + ], + "dna_sequence": "ATGAGTAAACACGACACCGACACTTCAGATCAACACGCCGCGAAACGCCGCTGGCTTAATGCCCACGAAGAGGGGTATCACAAAGCGATGGGCAATCGCCAGGTGCAGATGATCGCCATTGGCGGCGCGATTGGCACCGGCTTGTTTTTAGGTGCAGGAGCCCGACTGCAAATGGCGGGGCCCGCACTGGCACTGGTTTATTTAATTTGTGGCTTGTTTTCGTTTTTTATTCTGCGTGCATTGGGTGAGCTGGTGCTACACCGCCCTTCCAGTGGCAGTTTTGTTTCTTATGCCCGTGAGTTTTTGGGTGAGAAAGCCGCTTATGTTGCTGGCTGGATGTACTTCATCAACTGGGCGATGACGGGGATTGTTGATATTACCGCCGTCGCTCTGTATATGCATTACTGGGGTGCGTTTGGCGGCGTGCCGCAGTGGGTCTTTGCGCTCGCTGCACTTACCATCGTTGGCACCATGAATATGATCGGTGTGAAATGGTTTGCGGAGATGGAGTTCTGGTTTGCGCTTATTAAAGTGCTCGCCATTGTGACCTTTTTGGTCGTGGGTACAGTGTTCCTCGGTAGTGGTCAGCCGCTGGATGGCAACACCACTGGCTTTCATTTAATCACCGATAATGGCGGCTTCTTCCCCCACGGTTTGCTGCCTGCGCTGGTGTTGATTCAGGGCGTAGTGTTTGCTTTTGCCTCCATTGAAATGGTGGGTACAGCTGCCGGAGAATGTAAAGATCCGCAGACCATGGTGCCTAAAGCCATTAACAGTGTGATTTGGCGTATTGGCCTGTTTTACGTCGGCTCCGTGGTGTTGCTGGTTATGTTATTGCCGTGGAGCGCGTATCAGGCGGGGCAAAGTCCGTTCGTGACGTTTTTCTCTAAACTGGGTGTGCCATATATCGGCAGCATTATGAACATTGTGGTGCTGACCGCTGCCCTCTCCAGCCTGAATTCAGGTCTGTACTGCACCGGACGTATTCTGCGCTCAATGGCGATGGGCGGTTCCGCACCGAGTTTTATGGCGAAAATGAGTCGTCAGCATGTGCCGTATGCCGGGATTCTGGCGACACTAGTTGTGTATGTCGTCGGCGTATTCCTCAACTATCTGGTGCCGTCGCGCGTATTTGAGATTGTGTTGAACTTCGCGTCGCTGGGAATCATCGCTTCATGGGCGTTTATCATCGTGTGCCAGATGCGCCTGCGTAAAGCGATTAAAGAAGGCAAAGCAGCGGATGTCAGTTTTAAACTGCCTGGCGCGCCCTTCACTTCCTGGCTGACATTACTGTTTTTACTGAGTGTCCTTGTGCTGATGGCGTTCGATTACCCGAACGGGACTTATACTATCGCGGCGCTGCCGATTATCGGTATTTTGCTGGTTATAGGCTGGTTTGGTGTGCGCAAACGCGTTGCTGAAATTCACAGCACTGCGCCAGTCGTCGAGGAAGATGAAGAAAAACAGGAAATTGTGTTTAAGCCTGAAACGGCGAGTTAA", + "dna_sequence_length": 1500, + "functions": [ + "L-asparagine transporter" + ], + "id": "CDS_1442", + "location": [ + [ + "NC_000913", + 1525980, + "-", + 1500 + ] + ], + "md5": "c128b4ccc554c62f09cd49153e932f58", + "parent_gene": "", + "protein_md5": "d2f575cc960ee90ad15ca4bb5b1f71b2", + "protein_translation": "MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS", + "protein_translation_length": 499, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004851" + ], + [ + "gene_synonym", + "ECK1448" + ], + [ + "gene_synonym", + "EcoGene:EG13777" + ], + [ + "gene_synonym", + "GI:16129413" + ], + [ + "gene_synonym", + "GeneID:946023" + ], + [ + "gene_synonym", + "JW1449" + ], + [ + "gene_synonym", + "NP_415971.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76117" + ], + [ + "gene_synonym", + "b1454" + ], + [ + "gene_synonym", + "yncG" + ] + ], + "dna_sequence": "ATGATTAAGGTGTATGGCGTACCCGGATGGGGCTCTACAATCAGTGAGCTGATGCTAACACTGGCTGATATTCCTTATCAGTTCGTTGATGTCAGTGGTTTTGACCACGAGGGAGCTTCACGCGAGTTATTGAAAACCCTGAACCCGTTGTGTCAGGTTCCGACACTGGCATTGGAAAATGACGAGATTATGACGGAGACAGCGGCGATTGCATTGATGGTTCTCGATCGTCGCCCGGACCTTGCGCCACCGGTTGGGCGCGCCGAACGTCAGCTGTTTCAACGGCTATTGGTCTGGCTGGTTGCTAATGTCTATCCAACATTCACTTTCGCCGATTACCCTGAGCGTTGGGCTCCTGACGCACCTGAACAGTTAAAGAAGAATGTTATTGAATATCGAAAATCGCTTTATATCTGGTTGAATTCGCAGCTCACTGCTGAACCTTATGCGTTTGGTGAGCAACTAACGCTGGTGGACTGTTATCTTTGCACTATGCGCACATGGGGGCCTGGGCATGAATGGTTTCAGGATAATGCCACGAATATCAGTGCGATTGCTGATGCTGTATGTCAGTTACCGAAATTACAAGAAGTATTAAAAAGGAATGAAATTATTTGA", + "dna_sequence_length": 618, + "functions": [ + "glutathione S-transferase homolog" + ], + "id": "CDS_1443", + "location": [ + [ + "NC_000913", + 1526247, + "+", + 618 + ] + ], + "md5": "fcd3dd9a0ffbffaef7e3201e47c48487", + "parent_gene": "", + "protein_md5": "62a116c748886d569474e10b9ee7385c", + "protein_translation": "MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004855" + ], + [ + "gene_synonym", + "ECK1449" + ], + [ + "gene_synonym", + "EcoGene:EG13778" + ], + [ + "gene_synonym", + "GI:16129414" + ], + [ + "gene_synonym", + "GeneID:946024" + ], + [ + "gene_synonym", + "JW5235" + ], + [ + "gene_synonym", + "NP_415972.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76118" + ], + [ + "gene_synonym", + "b1455" + ], + [ + "gene_synonym", + "yncH" + ] + ], + "dna_sequence": "ATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTCACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAA", + "dna_sequence_length": 213, + "functions": [ + "IPR020099 family protein" + ], + "id": "CDS_1444", + "location": [ + [ + "NC_000913", + 1526940, + "+", + 213 + ] + ], + "md5": "608865780c2c37fb1f94562a62e419b2", + "parent_gene": "", + "protein_md5": "c0602ba52776144c2bd3f8baa98182b5", + "protein_translation": "MVCFLIYITLLFIQRVYFISSEKKLTIHIVQMFQLLSQAFYNLKMFLMMDMLGVGDAININTNKNIRQVC", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004858" + ], + [ + "gene_synonym", + "ECK1450" + ], + [ + "gene_synonym", + "EcoGene:EG10010" + ], + [ + "gene_synonym", + "GeneID:946026" + ], + [ + "gene_synonym", + "JW1451" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24211" + ], + [ + "gene_synonym", + "b1456" + ], + [ + "gene_synonym", + "rhsE" + ] + ], + "dna_sequence": "TTAACCACCCTCAGCCATACCAGTGAAGGCCACCGCGTGTCGGTCCACTACGGCTATGACGATAAAGGCCGCCTGACCGGCGAACGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCACCATGAGACCGGACATGCGTACAACGAACAGGGGCTGGCAAACCGCGTCACGCCGGACAGTCTGCCGCCGGTGGAGTGGCTGACCTACGGCAGCGGCTATCTTGCGGGCATGAAGCTGGGCGGGACGCCGCTGCTGGAGTTCACGCGCGACCGCCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATATAAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTGGTGTACCTGGATTGATTGCTGCAAACAGCATTACTAACAGTGCTTACCAGTTCGGTTATGATATGGATGCTATTGTTGGCGGAGCTCATAATGGGGCCGCCGATGCAATGAGACATTGTTACTTGATGTGTCGAATGACTAAGACATTTGGATCAACAATAGCTGACGTGATAGGTAAAAATCATGAGGCGGCAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGCCAAATGTAGCGATGCATGTATTGAAAAATATAACACTGGGCAACTCTTCGGGTTAGATGGTATAAAAGCAGATAATCCAATAAAAGCAAAGCAAGGGAGTTCAGATGCTTCAAATTATTAG", + "dna_sequence_length": 2037, + "id": "CDS_1445", + "location": [ + [ + "NC_000913", + 1527902, + "+", + 2037 + ] + ], + "md5": "0d21569e76e56c86feae78e9f468e0de", + "parent_gene": "", + "protein_md5": "f1c336b091eb3d4bde075292cb126d45", + "protein_translation": "LTTLSHTSEGHRVSVHYGYDDKGRLTGERQTVENPETGELLWHHETGHAYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLLEFTRDRLHRETVRSFGSMAGSNAAYKLTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEENPHHLHQPYRLPGQQHDEESGLYYNRHRHYDPLQGRYITPDPIGLRGGWNMYQYPLNPIQVIDPMGLDAIENMTSGGLIYAVSGVPGLIAANSITNSAYQFGYDMDAIVGGAHNGAADAMRHCYLMCRMTKTFGSTIADVIGKNHEAAGDRQGQPAKERIMDLKNNTVGIACGDFSAKCSDACIEKYNTGQLFGLDGIKADNPIKAKQGSSDASNY", + "protein_translation_length": 678, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004861" + ], + [ + "gene_synonym", + "ECK1451" + ], + [ + "gene_synonym", + "EcoGene:EG11760" + ], + [ + "gene_synonym", + "GI:16129416" + ], + [ + "gene_synonym", + "GeneID:946958" + ], + [ + "gene_synonym", + "JW1452" + ], + [ + "gene_synonym", + "NP_415974.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31991" + ], + [ + "gene_synonym", + "b1457" + ], + [ + "gene_synonym", + "ydcD" + ] + ], + "dna_sequence": "ATGCTTCAAATTATTAGAGGCAAACTTGTCATTTTTTTAATTACCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGATATATCTTTCTGAAAAAAATATTATTTATAAAATAATTAATGACCAAAAAATTAGTAGAGGGAATGGTCATTTTATAAGTATAATGGTTAATAATTACAGGACGCACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCAATGATATTCTTTATAGCGTGCGATTAAAAAACATTAGTAAACTGGAGAATATGGAGTTCTGCGCTACAAAACAACGGGTGTATTTTAGTGATAAAAACAAGAAGGCTAGTTATAAAATAATTAATTATGGAGACTATTATGATGTTGATTATTATGATAACAATTTGAAAAATGAAGTTTTTGACTGGATTGGTAAATGGTCATAA", + "dna_sequence_length": 483, + "functions": [ + "putative immunity protein for RhsE" + ], + "id": "CDS_1446", + "location": [ + [ + "NC_000913", + 1529922, + "+", + 483 + ] + ], + "md5": "d24b5fd21a501f32612b7610bbed2fb8", + "parent_gene": "", + "protein_md5": "ba482d29dae3abea663e558976fa3975", + "protein_translation": "MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRTHCGVVDINLNFFNDILYSVRLKNISKLENMEFCATKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004865" + ], + [ + "gene_synonym", + "ASAP:ABE-0004868" + ], + [ + "gene_synonym", + "ECK1452" + ], + [ + "gene_synonym", + "EcoGene:EG14258" + ], + [ + "gene_synonym", + "GeneID:945121" + ], + [ + "gene_synonym", + "JW1453" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76119" + ], + [ + "gene_synonym", + "b1459" + ], + [ + "gene_synonym", + "yncI" + ], + [ + "gene_synonym", + "yncM" + ] + ], + "dna_sequence": "GTGAGTATTCAAAGTTTGCTTGATTATATTTCAGTGACCCCTGATATACGACAACAAGGAAAGGTTAAACATAAATTATCTGCTATTTTGTTTCTCACCGTATGTGCAGTAATTGCAGGTGCCGATGAGTGGCAGGAAATTGAAGATTTTGGACATGAAAGACTTGAATGGCTAAAGAAATATGGTGATTTTGATAATGGCATTCCGGTCGATGACACCATTGCACGCGTTGTGAGTAACATTGACAGTTTGGCCTTTGAAAAGATGTTTATTGAATGGATGCAGGAGTGCCATGAAATCACTGATGGTGAAATTATAGCAATAGATGGAAAGACCATAAGAGGCTCCTTTGATAAGGGAAAAAGAAAAGGAGCAATCCATATGGTGAGTGCATTCTCGAACGAAAATGGTGTTGTACTGGGGCAGGTGAAAACGGAAGCCAAAAGTAATGAGATTACAGCCATTCCAGAGTTGCTTAACCTACTGTATTTAAAGAAAAATTTGATAACCATTGATGCTATGGGCTGTCAGAAAGATATCGCTTCGAAGATCAAAGATAAAAAAGCAGATTATCTTCTGGCAGTAAAAGGCAATCAGGGGAAATTACATCATGCATTCGAGGAAAAATTTCCTGTAAATGTGTTTTCTAATTATAAAGGCGATTCGTTTAGTACGCAGGAGATAAGTCATGGAAGAAAAGAAACACGTTTGCATATTGTCAGTAACGTAACGCCTGAATTTTGTGATTTTGAATTCGAATGGAAGGGATTAAAAAAGCTTTGTGTAGCATTGTCATTCAGGCAGAAGAAAGAAGATAAATCAGCAGAAGGTGTAAGCATCCGATATTATATTTCATCAAAGGATATGGATGCTAAAGAATTTGCACATGCTATCAGAGCGCACTGGCTGATCGAGCACAGTCTTCATTGGGTGTTAGATGTAAAAATGAATGAAGATGCCAGCCGGATAAGAAGAGGAAACGCAGCCTAAATAATATCTGGAATAAAGAAGATGGCACTGAATTTATTAAGAGATTGCAAAGACATTAAGGGT", + "dna_sequence_length": 1053, + "id": "CDS_1447", + "location": [ + [ + "NC_000913", + 1530586, + "+", + 738 + ], + [ + "NC_000913", + 1531325, + "+", + 315 + ] + ], + "md5": "f4e48490ee07e76985996448c22632ec", + "parent_gene": "", + "protein_md5": "b6152bff78569261a5ca5702363c4998", + "protein_translation": "VSIQSLLDYISVTPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVSNVTPEFCDFEFEWKGLKKLCVALSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAA", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004872" + ], + [ + "gene_synonym", + "ECK1454" + ], + [ + "gene_synonym", + "EcoGene:EG11526" + ], + [ + "gene_synonym", + "GI:16129419" + ], + [ + "gene_synonym", + "GeneID:947435" + ], + [ + "gene_synonym", + "JW1455" + ], + [ + "gene_synonym", + "NP_415977.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28917" + ], + [ + "gene_synonym", + "b1460" + ], + [ + "gene_synonym", + "ydcC" + ] + ], + "dna_sequence": "ATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGACACCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATGAGATTACAGCTATCCCAGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCGGTAAAAGGAAACCAGGGGCGGCTAAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGCGCATGACAGTTACGCAATGAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCTCGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCAGAGAAGTTCGCCACAGCAATCCGAAACCACTGGCATGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAA", + "dna_sequence_length": 1137, + "functions": [ + "H repeat-associated putative transposase" + ], + "id": "CDS_1448", + "location": [ + [ + "NC_000913", + 1531816, + "+", + 1137 + ] + ], + "md5": "4d1a357584e42ca34f3065489b8a70a5", + "parent_gene": "", + "protein_md5": "332ca35bff22d18a9d4028cc8212c7b2", + "protein_translation": "MELKKLMGHISIIPDYRQAWKMEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPAHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKELEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLTGSGLS", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004875" + ], + [ + "gene_synonym", + "ECK1455" + ], + [ + "gene_synonym", + "EcoGene:EG11761" + ], + [ + "gene_synonym", + "GI:16129420" + ], + [ + "gene_synonym", + "GeneID:945731" + ], + [ + "gene_synonym", + "JW1456" + ], + [ + "gene_synonym", + "NP_415978.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31992" + ], + [ + "gene_synonym", + "b1461" + ], + [ + "gene_synonym", + "pptA" + ], + [ + "gene_synonym", + "ydcE" + ] + ], + "dna_sequence": "ATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCATTGCTCTACAGCAGATTCAACCAGAATCTTGGCAAGCTATCTGGGATGCCGAAATCGCGCCCCAAATGGAGGCTTTGATAAAGAAACCTGGTTATAGCATGAATGCTTAA", + "dna_sequence_length": 234, + "functions": [ + "4-oxalocrotonate tautomerase" + ], + "id": "CDS_1449", + "location": [ + [ + "NC_000913", + 1533052, + "+", + 234 + ] + ], + "md5": "93f8857830eabe5b174e86e37ae399fc", + "parent_gene": "", + "protein_md5": "f29a216ec3899ba1a9b4ab3e6e62ced1", + "protein_translation": "MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004877" + ], + [ + "gene_synonym", + "ECK1456" + ], + [ + "gene_synonym", + "EcoGene:EG13779" + ], + [ + "gene_synonym", + "GI:90111278" + ], + [ + "gene_synonym", + "GeneID:946192" + ], + [ + "gene_synonym", + "JW1457" + ], + [ + "gene_synonym", + "NP_415979.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76121" + ], + [ + "gene_synonym", + "b1462" + ], + [ + "gene_synonym", + "yddH" + ] + ], + "dna_sequence": "ATGAGCCGATTCATCCCCATAGAATTACACCATGCCAGCCGTCTGTTAAATCATGGCCCAACGGTCTTGATCACCAGTTTCGATGAGCAATCCCAGCGGCGTAACATTATGGCTGCAGCCTGGTCAATGCCGGTGGAGTTTGAACCTCCACGCGTGGCGATTGTGGTAGATAAATCGACATGGACCAGGGAGTTGATTGAACATAACGGTAAATTTGGCATCGTTATCCCGGGCGTTGCAGCAACTAACTGGACGTGGGCGGTGGGAAGTGTGTCGGGGCGTGATGAAGATAAATTTAATTGCTATGGCATTCCGGTTGTGAGAGGCCCGGTATTTGGTTTGCCTCTGGTCGAGGAAAAATGTCTGGCGTGGATGGAGTGTCGATTGCTACCTGCGACTTCTGCGCAAGAAGAATACGACACGCTGTTTGGCGAAGTAGTATCAGCAGCGGCAGACGCACGGGTATTTGTCGAAGGCCGCTGGCAGTTTGATGATGATAAGCTCAATACGTTGCATCATTTAGGTGCTGGGACGTTTGTTACCAGCGGCAAGCGTGTTACGGCGGGTTAA", + "dna_sequence_length": 570, + "functions": [ + "flavin reductase like-protein" + ], + "id": "CDS_1450", + "location": [ + [ + "NC_000913", + 1533851, + "-", + 570 + ] + ], + "md5": "14ffd62229aa814018c66ce134544db9", + "parent_gene": "", + "protein_md5": "b5799dae2c50efd7f74cb117ee504578", + "protein_translation": "MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG", + "protein_translation_length": 189, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004882" + ], + [ + "gene_synonym", + "ECK1457" + ], + [ + "gene_synonym", + "EcoGene:EG13780" + ], + [ + "gene_synonym", + "GI:16129422" + ], + [ + "gene_synonym", + "GeneID:947251" + ], + [ + "gene_synonym", + "JW1458" + ], + [ + "gene_synonym", + "NP_415980.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77567" + ], + [ + "gene_synonym", + "b1463" + ], + [ + "gene_synonym", + "nhoA" + ], + [ + "gene_synonym", + "yddI" + ] + ], + "dna_sequence": "ATGACGCCCATTCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTGGCGGTTACTGTTTTGAGCAGAATGGCGTGTTTGAGCGGGTGTTACGCGAGCTGGGGTTTAACGTTCGCAGCTTGTTAGGGCGCGTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAGACCACGCCACACGGAGAGTATCGGTTGTTGCAGGAGGGTGATGATTGGGTGTTGCAGTTTAATCATCATCAGCATTGGCAGTCGATGTACCGTTTTGATCTCTGCGAGCAGCAACAAAGCGATTATGTGATGGGCAATTTCTGGTCGGCGCACTGGCCGCAGTCGCATTTTCGCCATCATTTGCTGATGTGCCGCCATTTGCCGGACGGCGGCAAGCTGACACTGACCAATTTTCATTTTACCCATTATGAAAATGGGCACGCGGTGGAGCAGCGAAATCTACCGGATGTGGCGTCATTATATGCTGTGATGCAAGAACAGTTTGGTCTGGGCGTGGATGATGCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAA", + "dna_sequence_length": 846, + "functions": [ + "N-hydroxyarylamine O-acetyltransferase" + ], + "id": "CDS_1451", + "location": [ + [ + "NC_000913", + 1534024, + "+", + 846 + ] + ], + "md5": "d28ace5e194d27fb621c975b2c99e238", + "parent_gene": "", + "protein_md5": "c6b7e674fc75afa2015b74bd6183098c", + "protein_translation": "MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVLLPREIQLDNQSPEEKLVIARRGGYCFEQNGVFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVELEEEKWIADVGFGGQTLTAPIRLVSDLVQTTPHGEYRLLQEGDDWVLQFNHHQHWQSMYRFDLCEQQQSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFHFTHYENGHAVEQRNLPDVASLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTHPEAGK", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004886" + ], + [ + "gene_synonym", + "ECK1458" + ], + [ + "gene_synonym", + "EcoGene:EG11825" + ], + [ + "gene_synonym", + "GI:16129423" + ], + [ + "gene_synonym", + "GeneID:944782" + ], + [ + "gene_synonym", + "JW1459" + ], + [ + "gene_synonym", + "NP_415981.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37757" + ], + [ + "gene_synonym", + "b1464" + ], + [ + "gene_synonym", + "yddE" + ] + ], + "dna_sequence": "ATGAAACCGCAGGTGTACCACGTCGATGCTTTTACCTCACAACCGTTTCGCGGCAATTCTGCCGGTGTTGTTTTCCCCGCCGATAATCTTAGCGAAGCGCAAATGCAGCTTATCGCCCGCGAGTTAGGCCATTCGGAAACTGCTTTTCTGCTGCACAGCGACGACAGCGATGTGCGCATCCGCTACTTTACGCCAACGGTTGAAGTGCCGATTTGCGGTCACGCGACAGTAGCTGCGCACTATGTACGTGCGAAGGTGTTAGGTTTAGGAAATTGCACGATCTGGCAAACATCGCTGGCAGGAAAACATCGCGTGACTATCGAAAAGCACAACGATGATTATCGTATTTCGCTGGAACAAGGTACGCCGGGCTTTGAGCCACCGCTGGAAGGTGAAACACGTGCGGCGATTATCAACGCGCTTCATCTCACTGAGGACGATATTCTGCCAGGCTTGCCAATTCAGGTGGCAACAACAGGACACTCAAAAGTGATGATCCCACTGAAACCGGAAGTGGATATCGACGCCCTTTCGCCTGACCTTAATGCGCTGACCGCTATCAGCAAAAAGATTGGCTGCAATGGTTTCTTCCCGTTCCAGATCCGCCCAGGCAAAAACGAAACCGATGGTCGCATGTTCTCGCCTGCGATTGGTATTGTGGAAGATCCGGTGACTGGCAATGCCAATGGCCCGATGGGTGCATGGTTGGTACATCACAACGTATTGCCCCACGATGGCAACGTGTTGCGTGTTAAAGGCCATCAGGGGCGCGCATTGGGGCGTGACGGTATGATTGAAGTGACGGTGACAATTCGTGATAACCAACCGGAAAAAGTCACCATTTCAGGCACAGCGGTGATTTTGTTTCATGCCGAATGGGCAATTGAACTCTGA", + "dna_sequence_length": 894, + "functions": [ + "PhzC-PhzF family protein" + ], + "id": "CDS_1452", + "location": [ + [ + "NC_000913", + 1535858, + "-", + 894 + ] + ], + "md5": "01c19cf69cdc82674acff42cc6625f66", + "parent_gene": "", + "protein_md5": "9aa2f18952604f703a94a86508ad54e1", + "protein_translation": "MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEL", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004889" + ], + [ + "gene_synonym", + "ECK1459" + ], + [ + "gene_synonym", + "EcoGene:EG10644" + ], + [ + "gene_synonym", + "GI:16129424" + ], + [ + "gene_synonym", + "GeneID:946029" + ], + [ + "gene_synonym", + "JW1460" + ], + [ + "gene_synonym", + "NP_415982.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF32" + ], + [ + "gene_synonym", + "b1465" + ], + [ + "gene_synonym", + "chlZ" + ], + [ + "gene_synonym", + "narV" + ] + ], + "dna_sequence": "ATGATTCAGTATCTGAACGTCTTTTTTTACGATATCTACCCGTACATTTGTGCGACGGTGTTTTTCCTCGGCAGCTGGCTGCGCTACGACTACGGGCAGTACACCTGGCGCGCCTCCTCAAGTCAAATGCTCGATAAACGCGGGATGGTGATATGGTCGAATCTGTTCCATATCGGCATTTTGGGGATTTTCTTCGGGCACTTGTTCGGCATGTTAACGCCGCACTGGATGTACGCGTGGTTTTTGCCAGTGGCAGCGAAACAACTCATGGCGATGGTGCTCGGCGGTATTTGCGGTGTGTTGACGTTGATTGGCGGCGCAGGACTGCTGTGGCGCAGGCTGACAAATCAGCGCGTGCGTGCCACTTCCACTACGCCGGATATCATCATCATGAGCATTTTGCTGATCCAGTGTCTGTTGGGGCTAAGTACCATACCGTTTTCAGCACAGTATCCTGATGGTAGCGAAATGATGAAGCTGGTGGGTTGGGCGCAAAGCATTGTCACTTTCCGTGGTGGATCGTCAGAGATGCTCAACGGCGTAGCGTTCGTCTTCCGCCTGCATCTGGTGTTGGGAATGACCATCTTCCTGCTCTTCCCGTTCACCCGACTGGTGCATGTGTGGAGCGCGCCGTTTGAGTACTTTACTCGTCGATATCAAATTGTGCGTTCGCGGCGATAA", + "dna_sequence_length": 681, + "functions": [ + "nitrate reductase 2 (NRZ), gamma subunit" + ], + "id": "CDS_1453", + "location": [ + [ + "NC_000913", + 1536617, + "-", + 681 + ] + ], + "md5": "c6ae74b258c07a88c5788d187cb7ff5a", + "parent_gene": "", + "protein_md5": "518d722229fa6ceeca377747352bdbd8", + "protein_translation": "MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLTLIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLNGVAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR", + "protein_translation_length": 226, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004892" + ], + [ + "gene_synonym", + "ECK1460" + ], + [ + "gene_synonym", + "EcoGene:EG10645" + ], + [ + "gene_synonym", + "GI:16129425" + ], + [ + "gene_synonym", + "GeneID:946032" + ], + [ + "gene_synonym", + "JW1461" + ], + [ + "gene_synonym", + "NP_415983.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19317" + ], + [ + "gene_synonym", + "b1466" + ], + [ + "gene_synonym", + "chlZ" + ], + [ + "gene_synonym", + "narW" + ] + ], + "dna_sequence": "ATGCAGATCCTCAAAGTGATCGGCCTGTTGATGGAGTATCCGGACGAGCTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGCACCACGTCGCTGCTGCTGTTCGAACATGTTCATGCCGAGTCCCGCGATCGCGGCCAGGCAATGGTGGACCTGCTGGCGGAGTATGAAAAGGTCGGCCTGCAGCTGGATTGTCGGGAACTGCCCGATTATCTACCGCTGTATCTGGAGTATTTAAGCGTACTGCCTGACGATCAGGCGAAAGAAGGATTGCTCAATGTTGCGCCGATCCTCGCCCTGCTTGGCGGTCGCTTAAAACAACGCGAGGCACCGTGGTACGCGTTGTTTGATGCTCTGCTGCAACTGGCGGGAAGCTCCCTTTCAAGTGACAGTGTCACAAAACAAGTAAACAGCGAAGAGCGCGATGACACCCGCCAGGCGCTTGATGCAGTGTGGGAAGAGGAACAGGTGAAGTTTATTGAAGATAACGCCACGGCGTGTGACAGCTCGCCGCTTAATCAATATCAGCGACGCTTTAGCCAGGATGTCGCGCCGCAATATGTCGACATCAGTGCGGGAGGTGGGAAATGA", + "dna_sequence_length": 696, + "functions": [ + "nitrate reductase 2 (NRZ), delta subunit (assembly subunit)" + ], + "id": "CDS_1454", + "location": [ + [ + "NC_000913", + 1537309, + "-", + 696 + ] + ], + "md5": "b568e63804e320d2aec7bc09cb1eabee", + "parent_gene": "", + "protein_md5": "81ceddaac98c865928b8e863f3bba063", + "protein_translation": "MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLLNAPLLDKQAEWCEVFDRGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRELPDYLPLYLEYLSVLPDDQAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGSSLSSDSVTKQVNSEERDDTRQALDAVWEEEQVKFIEDNATACDSSPLNQYQRRFSQDVAPQYVDISAGGGK", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004896" + ], + [ + "gene_synonym", + "ECK1461" + ], + [ + "gene_synonym", + "EcoGene:EG10647" + ], + [ + "gene_synonym", + "GI:16129426" + ], + [ + "gene_synonym", + "GeneID:946034" + ], + [ + "gene_synonym", + "JW1462" + ], + [ + "gene_synonym", + "NP_415984.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19318" + ], + [ + "gene_synonym", + "b1467" + ], + [ + "gene_synonym", + "chlZ" + ], + [ + "gene_synonym", + "narY" + ] + ], + "dna_sequence": "ATGAAAATCCGTTCACAAGTCGGCATGGTGCTTAACCTCGACAAATGTATCGGCTGCCATACCTGTTCGGTGACCTGTAAAAACGTCTGGACCGGGCGCGAAGGCATGGAGTACGCATGGTTTAACAACGTCGAAACCAAACCGGGCATTGGTTATCCGAAAAACTGGGAAGATCAGGAAGAGTGGCAAGGCGGCTGGGTGCGTGATGTGAATGGCAAGATACGCCCGCGTCTGGGCAACAAGATGGGCGTAATAACCAAAATCTTCGCCAACCCGGTGGTGCCGCAGATTGATGATTACTACGAACCTTTCACCTTCGACTACGAACATTTGCATAGCGCACCGGAAGGCAAACATATTCCTACTGCTCGCCCGCGTTCACTGATTGACGGCAAACGGATGGACAAAGTGATCTGGGGGCCAAACTGGGAAGAACTGCTGGGCGGTGAGTTCGAAAAACGTGCCCGCGACCGCAACTTCGAGGCCATGCAAAAGGAGATGTACGGGCAGTTTGAAAACACCTTCATGATGTACCTGCCGCGCCTGTGCGAACACTGCCTCAATCCCAGCTGCGTGGCGACCTGCCCAAGCGGCGCTATCTACAAACGCGAAGAAGACGGCATTGTGCTGATTGATCAGGATAAATGCCGTGGCTGGCGTTTGTGCATAAGCGGTTGTCCGTACAAAAAAATCTACTTCAACTGGAAAAGCGGCAAGTCAGAAAAATGCATCTTCTGTTACCCACGAATTGAGTCCGGTCAACCGACCGTGTGCTCAGAAACCTGCGTGGGTCGCATCCGGTATCTGGGCGTGCTGCTTTACGACGCCGACCGCATCGAGGAAGCGGCGAGCACCGAGCGCGAAGTTGACCTCTATGAACGCCAGTGCGAAGTGTTCCTCGATCCACACGATCCCTCAGTGATCGAGGAAGCCCTGAAACAAGGTATTCCACAAAATGTGATTGACGCTGCCCAGCGTTCGCCAGTCTACAAAATGGCGATGGACTGGAAACTGGCACTACCGTTGCACCCTGAATACCGCACCCTGCCGATGGTCTGGTACGTTCCTCCGCTGTCACCGATTCAGTCCTACGCAGATGCGGGCGGTTTGCCGAAAAGCGAAGGCGTGCTGCCCGCCATCGAAAGCCTGCGTATTCCGGTGCAATATCTCGCCAATATGTTGAGTGCCGGCGATACCGGTCCGGTACTGCGGGCGCTGAAACGGATGATGGCGATGCGCCACTATATGCGTTCACAAACCGTGGAAGGCGTTACTGATACTCGTGCCATCGACGAAGTAGGCCTGAGCGTCGCCCAGGTCGAAGAGATGTATCGCTATCTCGCCATTGCCAACTATGAAGATCGTTTTGTTATCCCGACCAGCCATCGGGAAATGGCGGGCGATGCCTTCGCAGAACGCAACGGCTGCGGTTTTACCTTTGGCGACGGTTGCCACGGTTCGGACAGTAAATTCAACCTGTTCAACAGTAGCCGTATCGATGCCATCAACATCACCGAAGTGCGCGACAAAGCGGAGGGCGAATAA", + "dna_sequence_length": 1545, + "functions": [ + "nitrate reductase 2 (NRZ), beta subunit" + ], + "id": "CDS_1455", + "location": [ + [ + "NC_000913", + 1538853, + "-", + 1545 + ] + ], + "md5": "339c3f83181dd5613178f2227a823abf", + "parent_gene": "", + "protein_md5": "1c769a058f6972b9bc5b3f810a3ca296", + "protein_translation": "MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGNKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFLDPHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFNLFNSSRIDAINITEVRDKAEGE", + "protein_translation_length": 514, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004898" + ], + [ + "gene_synonym", + "ECK1462" + ], + [ + "gene_synonym", + "EcoGene:EG10648" + ], + [ + "gene_synonym", + "GI:16129427" + ], + [ + "gene_synonym", + "GeneID:945999" + ], + [ + "gene_synonym", + "JW1463" + ], + [ + "gene_synonym", + "NP_415985.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19319" + ], + [ + "gene_synonym", + "b1468" + ], + [ + "gene_synonym", + "chlZ" + ], + [ + "gene_synonym", + "narZ" + ] + ], + "dna_sequence": "ATGAGTAAACTTTTGGATCGCTTTCGCTACTTCAAACAAAAGGGCGAAACCTTTGCCGATGGTCACGGACAGGTGATGCATAGCAACCGCGACTGGGAGGACAGCTATCGCCAGCGTTGGCAGTTCGACAAAATCGTGCGTTCCACCCACGGTGTTAACTGTACAGGCTCCTGTAGCTGGAAAATCTACGTTAAAAATGGTCTGGTGACCTGGGAAATCCAACAGACCGACTACCCGCGCACTCGCCCTGACCTGCCCAATCATGAACCTCGCGGCTGCCCGCGTGGCGCAAGTTACTCCTGGTATCTTTACAGCGCTAACCGCCTGAAATACCCGCTCATTCGTAAACGACTGATTGAACTGTGGCGCGAAGCCCTCAAGCAACACAGCGATCCGGTACTGGCGTGGGCATCGATTATGAACGATCCGCAAAAGTGCCTGAGCTACAAACAAGTGCGTGGGCGCGGCGGGTTTATCCGCTCCAACTGGCAGGAACTAAACCAGCTGATTGCCGCCGCTAACGTCTGGACCATCAAAACCTACGGCCCGGATCGCGTTGCCGGTTTCTCGCCGATCCCGGCGATGTCGATGGTTTCTTACGCCGCCGGAACGCGTTATCTGTCGCTGCTTGGCGGCACCTGTTTAAGTTTCTACGACTGGTATTGCGACCTGCCGCCCGCCTCGCCGATGACCTGGGGCGAGCAAACCGACGTACCGGAATCTGCCGACTGGTATAACTCCAGCTACATCATCGCCTGGGGGTCTAACGTACCGCAGACACGTACGCCGGACGCCCACTTCTTTACCGAAGTACGCTACAAAGGCACTAAAACCATCGCCATTACCCCTGACTACTCTGAAGTGGCCAAATTGTGCGACCAGTGGCTGGCACCGAAACAAGGCACTGATAGCGCCCTGGCGATGGCAATGGGCCATGTGATTTTAAAAGAGTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGCGAAAGCAACAATCCGCAGTGGAAAACCGTAGCAGTTAATACCGCAGGTGAATTGGTAGTGCCGAACGGTTCGATTGGTTTCCGCTGGGGAGAAAAAGGCAAATGGAATCTGGAATCCATTGCCGCCGGTACGGAAACCGAATTGTCGTTAACCCTGCTCGGTCAACATGACGCTGTTGCAGGCGTGGCCTTCCCCTACTTTGGCGGCATTGAAAATCCGCATTTTCGCAGCGTAAAACACAATCCGGTGCTGGTGCGCCAATTGCCCGTTAAAAACCTGACGTTAGTCGATGGCAACACCTGTCCGGTGGTCAGCGTTTATGATTTGGTACTGGCGAATTACGGCCTCGATCGCGGGCTGGAAGATGAAAACAGTGCGAAAGATTACGCTGAAATCAAACCGTACACCCCAGCCTGGGGTGAGCAAATTACCGGCGTGCCGCGCCAGTATATTGAAACCATCGCCCGTGAATTTGCCGATACCGCCCATAAAACGCATGGGCGCTCGATGATTATCCTCGGCGCAGGTGTTAACCACTGGTATCACATGGACATGAACTACCGCGGGATGATCAATATGCTGATCTTCTGCGGTTGTGTCGGGCAAAGCGGTGGCGGCTGGGCACACTATGTCGGCCAGGAAAAACTGCGCCCACAAACCGGCTGGTTGCCACTGGCCTTTGCGCTCGACTGGAACCGACCACCGCGCCAAATGAACAGCACCTCGTTTTTCTACAATCATTCCAGCCAATGGCGCTATGAAAAAGTCTCTGCTCAGGAGTTACTTTCACCGCTCGCCGATGCCAGTAAGTACAGCGGTCATCTGATTGATTTCAACGTTCGCGCCGAACGTATGGGCTGGCTACCTTCTGCGCCGCAGCTGGGGCGTAACCCGCTCGGGATTAAAGCTGAAGCCGACAAGGCCGGATTATCCCCCACAGAATTTACCGCCCAGGCGCTGAAATCGGGCGATTTACGTATGGCCTGCGAACAACCAGATAGCAGCAGCAATCATCCGCGTAATTTGTTTGTCTGGCGCTCTAACCTGCTTGGCTCCTCCGGCAAAGGCCACGAGTATATGCAGAAGTATCTGCTGGGGACCGAAAGCGGGATTCAGGGCGAGGAACTCGGTGCCAGCGACGGGATCAAACCGGAAGAAGTCGAGTGGCAAACTGCAGCGATTGAAGGCAAGCTCGACCTGCTGGTGACGCTCGACTTCCGCATGTCCAGTACCTGCCTGTTCTCCGATATCGTTCTGCCCACCGCCACCTGGTACGAAAAAGACGATATGAACACCTCGGATATGCATCCGTTTATTCATCCGCTTTCTGCGGCGGTCGATCCGGCGTGGGAATCACGCAGCGACTGGGAAATCTACAAAGGTATCGCCAAAGCATTTTCGCAAGTGTGCGTGGGTCATCTTGGCAAAGAAACCGACGTGGTATTACAACCCCTACTGCATGACTCTCCGGCAGAGCTCTCACAGCCGTGTGAAGTGCTCGACTGGCGCAAAGGCGAATGCGATCTGATTCCAGGCAAAACCGCGCCGAATATTGTGGCGGTGGAGCGCGACTACCCTGCTACGTATGAACGCTTTACCTCGCTCGGGCCATTGATGGACAAACTTGGCAATGGCGGTAAAGGGATTTCGTGGAATACCCAGGATGAAATCGATTTCCTCGGCAAACTCAATTACACCAAGCGTGATGGCCCGGCACAGGGGCGTCCGCTGATTGACACCGCCATTGACGCTTCAGAAGTGATTCTGGCACTGGCACCGGAAACCAACGGTCATGTTGCAGTCAAAGCGTGGCAGGCGCTGGGCGAGATCACCGGGCGCGAACATACCCATCTGGCGCTGCACAAAGAGGACGAGAAGATTCGCTTTCGCGATATTCAGGCGCAGCCGCGTAAAATTATCTCCAGCCCCACCTGGTCCGGTCTGGAAAGCGATCACGTCTCCTATAACGCGGGATACACCAACGTTCATGAGTTAATTCCGTGGCGCACGCTGTCGGGACGCCAGCAGCTCTATCAGGATCATCCGTGGATGCGTGCTTTTGGTGAAAGCCTGGTGGCTTATCGCCCGCCTATCGACACCCGTAGCGTCAGTGAGATGCGCCAGATACCGCCAAACGGCTTCCCGGAAAAAGCACTTAACTTCCTGACGCCGCACCAGAAATGGGGCATTCACTCAACCTACAGTGAAAACCTGCTAATGCTGACGCTCTCTCGCGGTGGACCGATTGTCTGGATCAGCGAAACAGATGCCCGAGAACTGACCATTGTCGATAACGACTGGGTGGAAGTATTCAACGCCAACGGCGCGCTGACTGCCCGCGCGGTGGTCAGCCAACGTGTACCGCCGGGCATGACCATGATGTATCACGCCCAGGAACGCATTATGAATATTCCTGGTTCGGAAGTAACTGGCATGCGCGGCGGCATTCATAACTCGGTTACCCGCGTTTGCCCGAAACCAACGCATATGATTGGCGGTTACGCGCAGCTGGCCTGGGGCTTTAACTACTACGGCACCGTCGGATCGAACCGCGATGAGTTCATCATGATCCGCAAGATGAAGAACGTTAACTGGCTGGATGATGAAGGTCGCGATCAGGTACAGGAGGCGAAAAAATGA", + "dna_sequence_length": 3741, + "functions": [ + "nitrate reductase 2 (NRZ), alpha subunit" + ], + "id": "CDS_1456", + "location": [ + [ + "NC_000913", + 1542590, + "-", + 3741 + ] + ], + "md5": "92ecb3b24d3e1e5fc5b87ece23ed4532", + "parent_gene": "", + "protein_md5": "7a839c82814c9e723c9a5ca6d6674715", + "protein_translation": "MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSWKIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIELWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRASDLVDGLGESNNPQWKTVAVNTAGELVVPNGSIGFRWGEKGKWNLESIAAGTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCPVVSVYDLVLANYGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIETIAREFADTAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSSSNHPRNLFVWRSNLLGSSGKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGHLGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFTSLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAPETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHVSYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNANGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK", + "protein_translation_length": 1246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004901" + ], + [ + "gene_synonym", + "ECK1463" + ], + [ + "gene_synonym", + "EcoGene:EG12153" + ], + [ + "gene_synonym", + "GI:16129428" + ], + [ + "gene_synonym", + "GeneID:945799" + ], + [ + "gene_synonym", + "JW1464" + ], + [ + "gene_synonym", + "NP_415986.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37758" + ], + [ + "gene_synonym", + "b1469" + ], + [ + "gene_synonym", + "narU" + ], + [ + "gene_synonym", + "yddF" + ] + ], + "dna_sequence": "ATGGCACTGCAAAATGAGAAAAATAGTCGTTATCTTTTGCGCGACTGGAAACCAGAAAATCCGGCCTTCTGGGAAAATAAAGGAAAACATATTGCTCGAAGAAATCTCTGGATATCAGTCAGTTGTCTACTTCTTGCCTTCTGTGTCTGGATGCTATTTAGCGCAGTTACCGTTAATCTCAATAAAATCGGTTTTAATTTTACTACCGATCAACTCTTTTTATTAACCGCATTACCCTCCGTTTCTGGCGCATTATTGCGTGTTCCCTACTCCTTTATGGTGCCTATATTCGGTGGACGCCGATGGACGGTTTTTAGTACTGCAATCCTGATTATTCCTTGCGTCTGGCTCGGAATTGCCGTGCAAAATCCGAATACTCCTTTTGGGATATTTATCGTTATCGCTTTGCTATGCGGTTTTGCAGGTGCAAACTTTGCTTCGAGCATGGGCAATATCAGTTTCTTCTTTCCAAAAGCCAAACAAGGGAGCGCTCTTGGGATTAATGGCGGATTAGGAAACTTAGGTGTAAGTGTAATGCAGCTGGTTGCACCGCTGGTCATTTTTGTACCTGTATTTGCCTTTCTCGGCGTCAATGGCGTACCGCAGGCCGACGGTTCGGTGATGTCGCTGGCGAATGCCGCATGGATTTGGGTACCGCTACTGGCGATTGCCACGATCGCCGCATGGTCAGGGATGAATGATATCGCCAGTTCACGCGCCTCAATTGCCGACCAGCTCCCTGTCTTACAACGCCTGCATCTCTGGCTGCTGAGCCTGCTTTACCTTGCCACCTTCGGTTCGTTTATCGGTTTTTCTGCGGGTTTTGCCATGCTGGCAAAAACCCAGTTCCCGGATGTGAATATTCTGCGCCTGGCGTTCTTTGGCCCATTTATCGGTGCCATCGCGCGGTCGGTTGGTGGTGCTATTTCCGATAAGTTCGGCGGCGTGCGGGTGACGTTGATCAACTTTATTTTTATGGCGATTTTCAGTGCCCTGCTGTTCCTTACCTTACCGGGCACAGGCTCCGGTAATTTCATCGCCTTTTACGCCGTATTTATGGGGCTGTTTCTGACTGCGGGTCTGGGAAGTGGTTCTACTTTCCAGATGATCGCCGTCATCTTTCGCCAGATAACCATTTATCGGGTAAAGATGAAAGGCGGTAGTGATGAGCAAGCTCATAAAGAAGCCGTCACCGAAACGGCGGCGGCTCTGGGCTTTATCTCAGCCATTGGCGCAGTGGGCGGCTTTTTTATTCCGCAGGCGTTTGGCATGTCGCTCAATATGACCGGCTCTCCGGTCGGCGCGATGAAAGTGTTTTTAATCTTCTACATCGTTTGTGTGCTGCTGACCTGGCTGGTTTATGGTCGGCGGAAGTTCAGCCAAAAATAA", + "dna_sequence_length": 1389, + "functions": [ + "nitrate/nitrite transporter" + ], + "id": "CDS_1457", + "location": [ + [ + "NC_000913", + 1544060, + "-", + 1389 + ] + ], + "md5": "e555c112604e4da00c83d689e53c0420", + "parent_gene": "", + "protein_md5": "908b8b0b1c34b7c629d23f7622923267", + "protein_translation": "MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK", + "protein_translation_length": 462, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004906" + ], + [ + "gene_synonym", + "ECK1465" + ], + [ + "gene_synonym", + "EcoGene:EG13782" + ], + [ + "gene_synonym", + "GeneID:947312" + ], + [ + "gene_synonym", + "JW1467" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76123" + ], + [ + "gene_synonym", + "b1471" + ], + [ + "gene_synonym", + "yddJ" + ], + [ + "gene_synonym", + "yddK" + ] + ], + "dna_sequence": "ATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAACAATCACTTTAAACGACAACCATATTGCACATTTAAACGCCAAAAACACTACAAAACTGGAATATTTAAACTTAAGCAATAACAATTTACTGCCAACCAATGACATTGATCAACTAATATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAACAATGATCCACTTGCACAAATGCAGTACTGGACTGCAGTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGATTTATCAGGACTTAATTTAACCACTCAACCACCAGGGCTGCAAAACTTCACATCTATCAATCTTGATAATAACCAATTCACACATTTTGATGCAACCAACTACGATAGACTCGTAAAGCTAAGTCTGAATAGTAATGCTCTTGAGTCAATAAATTTTCCTCAAGGCAGAAATGTAAGTATTACACATATATCTATGAATAATAATGCTCTCAGAAATATTGATATAGATAGGCTTTCATCAGTTACTTATTTTAGTGCGGCACATAATCAACTAGAGTTTGTGCAATTAGAATCTTGCGAATGGCTGCAATACCTGAATCTCAGCCATAATCAATTAACTGATATTGTTGCAGGTAATAAAAATGAACTCTTACTGCTGGATCTATCCCATAATAAACTAACAAGTTTACACAATGACTTATTTCCCAACTTGAATACGTTACTTATTAACAACAATTTGCTTTCTGAAATTAAAATATTCTATAGCAACTTCTGCAATGTTCAGACATTAAACGCTGCTAACAACCAGTTGAAATATATAAATCTTGATTTCCTGACTTATCTTCCATCTATCAAAAGTTTAAGACTGGACAATAATAAAATAACCCACATTGATACTAATAATACATCCGATATTGGAACTTTATTCCCCATAATAAAACAGAGCAAAAACTTAAATTTTTTAAATGTTTCTGGGAAGAACAATTGCCCTACTATGCAGCTCATGTTATTTAATTTGTTTTCCCCAGCACTTAAGCTTAATACTGGCCTGGCAATTCTTTCGCCTGGTGCATTTGAAGTTCACTCTGACGGAATAGATGTGGATAACGAATTGTTTCACTATCCTATTAAAAAAGCATATACCCCATATAATATACACACTTACAAGACAGAGGAAGTTGTAAACCAGATGAATATAAAAGTTAAAAACATGACCTTAGATGAAATAAACAATACTTACTGTAATAACGATTATTACAATCAGGCAATAAGAGAGGAACCGATAGACCTTCTGGACAGATCGTTTTCCTCCAGTTCATGGCCTTTTTAG", + "dna_sequence_length": 1332, + "id": "CDS_1458", + "location": [ + [ + "NC_000913", + 1545714, + "-", + 951 + ], + [ + "NC_000913", + 1544764, + "-", + 381 + ] + ], + "md5": "8249a0946e62e521439aed1358221b81", + "parent_gene": "", + "protein_md5": "620326537ad48b2937200ffca827c1ba", + "protein_translation": "MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQMNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004910" + ], + [ + "gene_synonym", + "ECK1466" + ], + [ + "gene_synonym", + "EcoGene:EG13783" + ], + [ + "gene_synonym", + "GeneID:945737" + ], + [ + "gene_synonym", + "JW1468" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77519" + ], + [ + "gene_synonym", + "b1472" + ], + [ + "gene_synonym", + "yddL" + ] + ], + "dna_sequence": "ATGAAATTAAAAATAGTTGCGGTGGTTGTAACTGGTTTGTTAGCTGCGAACGTAGCACACGCTGCCGAAGTCTATAACAAGGATGGTAATAAACTCGACCTTTATGGCAAGGTTACCGCTCTACGTTATTTTACTGATGATAAGCGTGACGATGGTGATAAAACTTATGCCCGTCTCGGCTTTAAAGGAGAAACGCAAATCAATGATCAAATGATTGGTTTTGGTCACTGGGAATATGATTTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGC", + "dna_sequence_length": 279, + "id": "CDS_1459", + "location": [ + [ + "NC_000913", + 1546028, + "-", + 279 + ] + ], + "md5": "7325bf1fa1417c959cbaeb19f3356b14", + "parent_gene": "", + "protein_md5": "773e21d6b380b85e4008ca680e2939a2", + "protein_translation": "MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRG", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004912" + ], + [ + "gene_synonym", + "ECK1467" + ], + [ + "gene_synonym", + "EcoGene:EG12713" + ], + [ + "gene_synonym", + "GI:145698260" + ], + [ + "gene_synonym", + "GeneID:945942" + ], + [ + "gene_synonym", + "JW1469" + ], + [ + "gene_synonym", + "NP_415990.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46136" + ], + [ + "gene_synonym", + "b1473" + ], + [ + "gene_synonym", + "yddG" + ] + ], + "dna_sequence": "ATGACACGACAAAAAGCAACGCTCATAGGGCTGATAGCGATCGTCCTGTGGAGCACGATGGTAGGATTGATTCGCGGTGTCAGTGAGGGGCTCGGCCCGGTCGGCGGCGCAGCTGCTATCTATTCATTAAGCGGGCTGCTGTTAATCTTCACGGTTGGATTTCCGCGTATTCGGCAAATCCCGAAAGGCTATTTACTCGCCGGGAGTCTGTTATTCGTCAGCTATGAAATCTGTCTGGCGCTTTCCTTAGGGTATGCGGCGACCCATCATCAGGCGATTGAAGTGGGTATGGTGAACTATCTGTGGCCCAGCCTGACAATTCTCTTTGCCATTCTGTTTAATGGTCAGAAAACCAACTGGTTGATTGTACCTGGATTATTATTAGCCCTCGTCGGCGTCTGTTGGGTGTTAGGCGGTGACAATGGGTTACATTATGATGAAATCATCAATAATATCACCACCAGCCCATTGAGTTATTTCCTGGCGTTCATTGGTGCGTTTATCTGGGCAGCCTATTGCACAGTAACGAATAAATACGCACGCGGATTTAATGGAATTACCGTTTTTGTCCTGCTAACGGGAGCAAGTCTGTGGGTTTACTATTTTCTTACGCCACAACCAGAAATGATATTTAGCACGCCCGTCATGATTAAACTCATCTCTGCGGCATTTACCTTAGGATTTGCTTATGCTGCATGGAATGTCGGTATATTGCATGGCAATGTCACCATTATGGCGGTAGGTTCGTATTTTACGCCTGTACTTTCCTCAGCGCTTGCAGCCGTGCTGCTCAGCGCCCCGCTGTCGTTCTCGTTCTGGCAAGGCGCGCTGATGGTCTGCGGCGGTTCCCTGCTCTGCTGGCTGGCGACACGTCGTGGTTAA", + "dna_sequence_length": 882, + "functions": [ + "aromatic amino acid exporter" + ], + "id": "CDS_1460", + "location": [ + [ + "NC_000913", + 1547169, + "-", + 882 + ] + ], + "md5": "69627ca07c7de2265428a1351a409fdd", + "parent_gene": "", + "protein_md5": "28154e69030e06024ac836bbbd3203a5", + "protein_translation": "MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATHHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMIFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGALMVCGGSLLCWLATRRG", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004917" + ], + [ + "gene_synonym", + "ECK1468" + ], + [ + "gene_synonym", + "EcoGene:EG11227" + ], + [ + "gene_synonym", + "GI:16129433" + ], + [ + "gene_synonym", + "GeneID:946035" + ], + [ + "gene_synonym", + "JW1470" + ], + [ + "gene_synonym", + "NP_415991.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24183" + ], + [ + "gene_synonym", + "b1474" + ], + [ + "gene_synonym", + "fdnG" + ] + ], + "dna_sequence": "ATGGACGTCAGTCGCAGACAATTTTTTAAAATCTGCGCGGGCGGTATGGCTGGAACAACAGTAGCGGCATTGGGCTTTGCCCCGAAGCAAGCACTGGCTCAGGCGCGAAACTACAAATTATTACGCGCTAAAGAGATCCGTAACACCTGCACATACTGTTCCGTAGGTTGCGGGCTATTGATGTATAGCCTGGGTGATGGCGCAAAAAACGCCAGAGAAGCGATTTATCACATTGAAGGTGACCCGGATCATCCGGTAAGCCGTGGTGCGCTGTGCCCGAAAGGGGCCGGTTTGCTGGATTACGTCAACAGTGAAAACCGTCTGCGCTACCCGGAATATCGTGCGCCAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTTCTACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTGGATATCAAAAACGCTAACGTCGTGATGGTGATGGGCGGTAACGCTGCTGAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACGTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCTGAAAAACGTCAATACGATAAATCGTCCTGGAACTATCAGCTCGATGAAAACGGCTATGCGAAACGCGATGAAACACTGACTCATCCGCGCTGTGTGTGGAACCTGCTGAAAGAGCACGTTTCCCGCTACACGCCGGACGTCGTTGAAAACATCTGCGGTACGCCAAAAGCCGACTTCCTGAAAGTGTGTGAAGTGCTGGCCTCCACCAGCGCACCGGATCGCACAACCACCTTCCTGTACGCGCTGGGCTGGACGCAGCACACTGTGGGTGCGCAGAACATCCGTACTATGGCGATGATCCAGTTGCTGCTCGGTAACATGGGTATGGCCGGTGGCGGCGTGAACGCATTGCGTGGTCACTCCAACATTCAGGGCTTGACTGACTTAGGCCTGCTCTCTACCAGCCTGCCAGGTTATCTGACGCTGCCGTCAGAAAAACAGGTTGATTTGCAGTCGTATCTGGAAGCGAACACGCCGAAAGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTATTTCAACATGATGGATGAAGGCAAAGTCACCGGTTATTTCTGCCAGGGCTTTAACCCGGTTGCGTCCTTCCCGGACAAAAACAAAGTGGTGAGCTGCCTGAGCAAGCTGAAGTACATGGTGGTTATCGATCCGCTGGTGACTGAAACCTCTACCTTCTGGCAGAACCACGGTGAGTCGAACGATGTCGATCCGGCGTCTATTCAGACTGAAGTATTCCGTCTGCCTTCGACCTGCTTTGCTGAAGAAGATGGTTCTATCGCTAACTCCGGTCGCTGGTTGCAGTGGCACTGGAAAGGTCAGGACGCGCCGGGCGAAGCGCGTAACGACGGTGAAATTCTGGCGGGTATCTACCATCATCTGCGCGAGCTGTACCAGTCCGAAGGTGGTAAAGGCGTAGAACCGCTGATGAAGATGAGCTGGAACTACAAGCAGCCGCACGAACCGCAATCTGACGAAGTGGCTAAAGAGAACAACGGCTACGCGCTGGAAGATCTCTATGACGCTAATGGCGTGCTTATTGCGAAGAAAGGTCAGTTGCTGAGTAGCTTTGCGCATCTGCGTGATGACGGTACAACCGCATCTTCTTGCTGGATCTACACCGGTAGCTGGACAGAGCAGGGCAACCAGATGGCTAACCGCGATAACTCCGACCCGTCCGGTCTGGGGAATACGCTGGGATGGGCCTGGGCGTGGCCGCTCAACCGTCGCGTGCTGTACAACCGTGCTTCGGCGGATATCAACGGTAAACCGTGGGATCCGAAACGGATGCTGATCCAGTGGAACGGCAGCAAGTGGACGGGTAACGATATTCCTGACTTCGGCAATGCCGCACCGGGTACGCCAACCGGGCCGTTTATCATGCAGCCGGAAGGGATGGGACGCCTGTTTGCCATCAACAAAATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGATTGAAACGCCGCTGGGCACTAACCCGCTGCATCCGAACGTGGTGTCTAACCCGGTTGTTCGTCTGTATGAACAAGACGCGCTGCGGATGGGTAAAAAAGAGCAGTTCCCGTATGTGGGTACGACCTATCGTCTGACCGAGCACTTCCACACCTGGACCAAGCACGCATTGCTCAACGCAATTGCTCAGCCGGAACAGTTTGTGGAAATCAGCGAAACGCTGGCGGCGGCGAAAGGCATTAATAATGGCGATCGTGTCACTGTCTCCAGCAAGCGTGGCTTTATCCGCGCGGTGGCTGTGGTAACGCGTCGTCTGAAACCGCTGAATGTAAATGGTCAGCAGGTTGAAACGGTGGGTATTCCAATCCACTGGGGCTTTGAGGGTGTCGCGCGTAAAGGTTATATCGCTAACACTCTGACGCCGAATGTCGGTGATGCAAACTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAA", + "dna_sequence_length": 3048, + "functions": [ + "formate dehydrogenase-N, alpha subunit, nitrate-inducible" + ], + "id": "CDS_1461", + "location": [ + [ + "NC_000913", + 1547401, + "+", + 3048 + ] + ], + "md5": "9f61c5f831c360ff31136d293cf82532", + "parent_gene": "", + "protein_md5": "b4fa4490c1e393d6a31be1be2f0c41e3", + "protein_translation": "MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAKEIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIRSGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYDKSSWNYQLDENGYAKRDETLTHPRCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCEVLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDGSIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQSEGGKGVEPLMKMSWNYKQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGIPIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA", + "protein_translation_length": 1015, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004919" + ], + [ + "gene_synonym", + "ECK1469" + ], + [ + "gene_synonym", + "EcoGene:EG11228" + ], + [ + "gene_synonym", + "GI:16129434" + ], + [ + "gene_synonym", + "GeneID:948794" + ], + [ + "gene_synonym", + "JW1471" + ], + [ + "gene_synonym", + "NP_415992.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ3" + ], + [ + "gene_synonym", + "b1475" + ], + [ + "gene_synonym", + "fdnH" + ] + ], + "dna_sequence": "ATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTCTCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCCGTCTGCTGGTGCAATCATTCAGTACGCTAACGGGATTGTCGATTTCCAGTCGGAAAACTGCATCGGCTGTGGTTACTGCATTGCCGGGTGTCCGTTTAATATTCCGCGCCTCAACAAAGAGGATAACCGGGTATATAAATGCACGCTCTGCGTCGATCGCGTCAGCGTCGGCCAGGAACCGGCTTGTGTGAAAACCTGTCCGACCGGGGCTATCCACTTCGGCACCAAGAAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGCCTGTGGAAAGGCGCGTTGAAACCGCTGGCAGCGGCTGGCTTTATTGCCACTTTTGCCGGGTTGATTTTCCACTACATCGGTATTGGCCCGAATAAGGAAGTGGACGATGACGAGGAGGATCATCATGAGTAA", + "dna_sequence_length": 885, + "functions": [ + "formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible" + ], + "id": "CDS_1462", + "location": [ + [ + "NC_000913", + 1550461, + "+", + 885 + ] + ], + "md5": "aeada6079e6f5e12c37b3f59c09f826c", + "parent_gene": "", + "protein_md5": "75cef5c27f840a1ec1b9d27616b76458", + "protein_translation": "MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEDHHE", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004921" + ], + [ + "gene_synonym", + "ECK1470" + ], + [ + "gene_synonym", + "EcoGene:EG11229" + ], + [ + "gene_synonym", + "GI:16129435" + ], + [ + "gene_synonym", + "GeneID:946038" + ], + [ + "gene_synonym", + "JW1472" + ], + [ + "gene_synonym", + "NP_415993.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEK7" + ], + [ + "gene_synonym", + "b1476" + ], + [ + "gene_synonym", + "fdnI" + ] + ], + "dna_sequence": "ATGAGTAAGTCGAAAATGATTGTGCGCACCAAATTTATTGATCGCGCCTGTCACTGGACCGTGGTGATTTGCTTCTTCCTGGTGGCGCTGTCCGGGATTTCGTTCTTCTTCCCGACGCTGCAATGGCTGACGCAAACCTTCGGTACGCCGCAGATGGGACGCATTTTGCACCCGTTCTTCGGCATTGCGATTTTCGTCGCACTGATGTTTATGTTTGTGCGTTTTGTGCATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTTTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATGGCATTTTGGGTGAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAA", + "dna_sequence_length": 654, + "functions": [ + "formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible" + ], + "id": "CDS_1463", + "location": [ + [ + "NC_000913", + 1551338, + "+", + 654 + ] + ], + "md5": "ae925f781542f62e0289ab620afba05e", + "parent_gene": "", + "protein_md5": "0ef5fe073a18ffe29165fe9bf865a23a", + "protein_translation": "MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004925" + ], + [ + "gene_synonym", + "ECK1471" + ], + [ + "gene_synonym", + "EcoGene:EG13784" + ], + [ + "gene_synonym", + "GI:145698261" + ], + [ + "gene_synonym", + "GeneID:946040" + ], + [ + "gene_synonym", + "JW5908" + ], + [ + "gene_synonym", + "NP_415994.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67699" + ], + [ + "gene_synonym", + "b1477" + ], + [ + "gene_synonym", + "yddM" + ] + ], + "dna_sequence": "ATGAAAATGGCCAATCATCCCCGCCCGGGGGACATTATTCAGGAATCACTGGACGAACTTAATGTCAGCCTGCGCGAGTTTGCCAGAGCAATGGAAATTGCTCCCTCAACGGCAAGCCGATTGCTGACAGGAAAAGCAGCTTTGACGCCAGAAATGGCGATTAAACTTTCCGTGGTGATCGGCAGTTCGCCGCAAATGTGGCTGAATCTGCAAAACGCCTGGAGTCTGGCAGAGGCAGAAAAAACAGTGGATGTGTCGCGATTACGCCGTCTGGTTACGCAATAA", + "dna_sequence_length": 285, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1464", + "location": [ + [ + "NC_000913", + 1552682, + "-", + 285 + ] + ], + "md5": "da7fa3e7717d9df049dca27a6e7b1ce9", + "parent_gene": "", + "protein_md5": "4f56ef81d6622cc1f5000ca16467b31d", + "protein_translation": "MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004928" + ], + [ + "gene_synonym", + "ECK1472" + ], + [ + "gene_synonym", + "EcoGene:EG12622" + ], + [ + "gene_synonym", + "GI:90111280" + ], + [ + "gene_synonym", + "GeneID:946036" + ], + [ + "gene_synonym", + "JW1474" + ], + [ + "gene_synonym", + "NP_415995.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39451" + ], + [ + "gene_synonym", + "adhP" + ], + [ + "gene_synonym", + "b1478" + ], + [ + "gene_synonym", + "yddN" + ] + ], + "dna_sequence": "ATGAAGGCTGCAGTTGTTACGAAGGATCATCATGTTGACGTTACGTATAAAACACTGCGCTCACTGAAACATGGCGAAGCCCTGCTGAAAATGGAGTGTTGTGGTGTATGTCATACCGATCTTCATGTTAAGAATGGCGATTTTGGTGACAAAACCGGCGTAATTCTGGGCCATGAAGGCATCGGTGTGGTGGCAGAAGTGGGTCCAGGTGTCACCTCATTAAAACCAGGCGATCGTGCCAGCGTGGCGTGGTTCTACGAAGGATGCGGTCATTGCGAATACTGTAACAGTGGTAACGAAACGCTCTGCCGTTCAGTTAAAAATGCCGGATACAGCGTTGATGGCGGGATGGCGGAAGAGTGCATCGTGGTCGCCGATTACGCGGTAAAAGTGCCAGATGGTCTGGACTCGGCGGCGGCCAGCAGCATTACCTGTGCGGGAGTCACCACCTACAAAGCCGTTAAGCTGTCAAAAATTCGTCCAGGGCAGTGGATTGCTATCTACGGTCTTGGCGGTCTGGGTAACCTCGCCCTGCAATACGCGAAGAATGTCTTTAACGCCAAAGTGATCGCCATTGATGTCAATGATGAGCAGTTAAAACTGGCAACCGAAATGGGCGCAGATTTAGCGATTAACTCACACACCGAAGACGCCGCCAAAATTGTGCAGGAGAAAACTGGTGGCGCTCACGCTGCGGTGGTAACAGCGGTAGCTAAAGCTGCGTTTAACTCGGCAGTTGATGCTGTCCGTGCAGGCGGTCGTGTTGTGGCTGTCGGTCTACCGCCGGAGTCTATGAGCCTGGATATCCCACGTCTTGTGCTGGATGGTATTGAAGTGGTCGGTTCGCTGGTCGGCACGCGCCAGGATTTAACTGAAGCCTTCCAGTTTGCCGCCGAAGGTAAAGTGGTGCCGAAAGTCGCCCTGCGTCCGTTAGCGGACATCAACACCATCTTTACTGAGATGGAAGAAGGCAAAATCCGTGGCCGCATGGTGATTGATTTCCGTCACTAA", + "dna_sequence_length": 1011, + "functions": [ + "ethanol-active dehydrogenase/acetaldehyde-active reductase" + ], + "id": "CDS_1465", + "location": [ + [ + "NC_000913", + 1553838, + "-", + 1011 + ] + ], + "md5": "fef6bc7226b0fe415e285180911349c8", + "parent_gene": "", + "protein_md5": "425e740d048be98e59673d7886e22160", + "protein_translation": "MKAAVVTKDHHVDVTYKTLRSLKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEGIGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEECIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLKLATEMGADLAINSHTEDAAKIVQEKTGGAHAAVVTAVAKAAFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDGIEVVGSLVGTRQDLTEAFQFAAEGKVVPKVALRPLADINTIFTEMEEGKIRGRMVIDFRH", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004931" + ], + [ + "gene_synonym", + "ECK1473" + ], + [ + "gene_synonym", + "EcoGene:EG10948" + ], + [ + "gene_synonym", + "GI:90111281" + ], + [ + "gene_synonym", + "GeneID:946031" + ], + [ + "gene_synonym", + "JW5238" + ], + [ + "gene_synonym", + "NP_415996.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26616" + ], + [ + "gene_synonym", + "b1479" + ], + [ + "gene_synonym", + "maeA" + ], + [ + "gene_synonym", + "sfcA" + ] + ], + "dna_sequence": "ATGGAACCAAAAACAAAAAAACAGCGTTCGCTTTATATCCCTTACGCTGGCCCTGTACTGCTGGAATTTCCGTTGTTGAATAAAGGCAGTGCCTTCAGCATGGAAGAACGCCGTAACTTCAACCTGCTGGGGTTACTGCCGGAAGTGGTCGAAACCATCGAAGAACAAGCGGAACGAGCATGGATCCAGTATCAGGGATTCAAAACCGAAATCGACAAACACATCTACCTGCGTAACATCCAGGACACTAACGAAACCCTCTTCTACCGTCTGGTAAACAATCATCTTGATGAGATGATGCCTGTTATTTATACCCCAACCGTCGGCGCAGCCTGTGAGCGTTTTTCTGAGATCTACCGCCGTTCACGCGGCGTGTTTATCTCTTACCAGAACCGGCACAATATGGACGATATTCTGCAAAACGTGCCGAACCATAATATTAAAGTGATTGTGGTGACTGACGGTGAACGCATTCTGGGGCTTGGTGACCAGGGCATCGGCGGGATGGGCATTCCGATCGGTAAACTGTCGCTCTATACCGCCTGTGGCGGCATCAGCCCGGCGTATACCCTTCCGGTGGTGCTGGATGTCGGAACGAACAACCAACAGCTGCTTAACGATCCGCTGTATATGGGCTGGCGTAATCCGCGTATCACTGACGACGAATACTATGAATTCGTTGATGAATTTATCCAGGCTGTGAAACAACGCTGGCCAGACGTGCTGTTGCAGTTTGAAGACTTTGCTCAAAAAAATGCGATGCCGTTACTTAACCGCTATCGCAATGAAATTTGTTCTTTTAACGATGACATTCAGGGCACTGCGGCGGTAACAGTCGGCACACTGATCGCAGCAAGCCGCGCGGCAGGTGGTCAGTTAAGCGAGAAAAAAATCGTCTTCCTTGGCGCAGGTTCAGCGGGATGCGGCATTGCCGAAATGATCATCTCCCAGACCCAGCGCGAAGGATTAAGCGAGGAAGCGGCGCGGCAGAAAGTCTTTATGGTCGATCGCTTTGGCTTGCTGACTGACAAGATGCCGAACCTGCTGCCTTTCCAGACCAAACTGGTGCAGAAGCGCGAAAACCTCAGTGACTGGGATACCGACAGCGATGTGCTGTCACTGCTGGATGTGGTGCGCAATGTAAAACCAGATATTCTGATTGGCGTCTCAGGACAGACCGGGCTGTTTACGGAAGAGATCATCCGTGAGATGCATAAACACTGTCCGCGTCCGATCGTGATGCCGCTGTCTAACCCGACGTCACGCGTGGAAGCCACACCGCAGGACATTATCGCCTGGACCGAAGGTAACGCGCTGGTCGCCACGGGCAGCCCGTTTAATCCAGTGGTATGGAAAGATAAAATCTACCCTATCGCCCAGTGTAACAACGCCTTTATTTTCCCGGGCATCGGCCTGGGTGTTATTGCTTCCGGCGCGTCACGTATCACCGATGAGATGCTGATGTCGGCAAGTGAAACGCTGGCGCAGTATTCACCATTGGTGCTGAACGGCGAAGGTATGGTACTGCCGGAACTGAAAGATATTCAGAAAGTCTCCCGCGCAATTGCGTTTGCGGTTGGCAAAATGGCGCAGCAGCAAGGCGTGGCGGTGAAAACCTCTGCCGAAGCCCTGCAACAGGCCATTGACGATAATTTCTGGCAAGCCGAATACCGCGACTACCGCCGTACCTCCATCTAA", + "dna_sequence_length": 1698, + "functions": [ + "malate dehydrogenase, decarboxylating, NAD-requiring", + "malic enzyme" + ], + "id": "CDS_1466", + "location": [ + [ + "NC_000913", + 1555669, + "-", + 1698 + ] + ], + "md5": "f7efddbacf16d5597f5c38efbebdf52e", + "parent_gene": "", + "protein_md5": "7499aa9a5092768d8815fce129e040d6", + "protein_translation": "MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI", + "protein_translation_length": 565, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004935" + ], + [ + "gene_synonym", + "ECK1474" + ], + [ + "gene_synonym", + "EcoGene:EG11508" + ], + [ + "gene_synonym", + "GI:16129439" + ], + [ + "gene_synonym", + "GeneID:946030" + ], + [ + "gene_synonym", + "JW5962" + ], + [ + "gene_synonym", + "NP_415997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68191" + ], + [ + "gene_synonym", + "b1480" + ], + [ + "gene_synonym", + "rpsV" + ], + [ + "gene_synonym", + "sra" + ] + ], + "dna_sequence": "ATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAA", + "dna_sequence_length": 138, + "functions": [ + "stationary-phase-induced ribosome-associated protein" + ], + "id": "CDS_1467", + "location": [ + [ + "NC_000913", + 1555963, + "-", + 138 + ] + ], + "md5": "8df09d5cbb5ec1ba2d656488339594d9", + "parent_gene": "", + "protein_md5": "ce57e563d2a484e580c09854d14c2e25", + "protein_translation": "MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAEK", + "protein_translation_length": 45, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004938" + ], + [ + "gene_synonym", + "ECK1475" + ], + [ + "gene_synonym", + "EcoGene:EG14301" + ], + [ + "gene_synonym", + "GI:90111282" + ], + [ + "gene_synonym", + "GeneID:946041" + ], + [ + "gene_synonym", + "JW5239" + ], + [ + "gene_synonym", + "NP_415998.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76127" + ], + [ + "gene_synonym", + "b1481" + ], + [ + "gene_synonym", + "bdm" + ], + [ + "gene_synonym", + "yddX" + ] + ], + "dna_sequence": "ATGTTTACTTATTATCAGGCAGAAAATTCAACAGCAGAACCCGCTCTGGTTAATGCCATTGAGCAAGGCCTTCGGGCACAGCATGGTGTTGTCACTGAAGATGACATTCTCATGGAGCTGACCAAATGGGTTGAAGCTTCTGATAACGACATCCTCAGTGATATCTACCAGCAAACGATCAATTATGTGGTCAGTGGCCAGCACCCTACGCTTTAA", + "dna_sequence_length": 216, + "functions": [ + "biofilm-dependent modulation protein" + ], + "id": "CDS_1468", + "location": [ + [ + "NC_000913", + 1556280, + "-", + 216 + ] + ], + "md5": "ab0e8995595f2dd87c0023587ac009cb", + "parent_gene": "", + "protein_md5": "c2d2eec3f1fda1f562f4e4bd17649b15", + "protein_translation": "MFTYYQAENSTAEPALVNAIEQGLRAQHGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004944" + ], + [ + "gene_synonym", + "ECK1476" + ], + [ + "gene_synonym", + "EcoGene:EG10680" + ], + [ + "gene_synonym", + "GI:16129441" + ], + [ + "gene_synonym", + "GeneID:946043" + ], + [ + "gene_synonym", + "JW1477" + ], + [ + "gene_synonym", + "NP_415999.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0L2" + ], + [ + "gene_synonym", + "b1482" + ], + [ + "gene_synonym", + "osmC" + ] + ], + "dna_sequence": "ATGACAATCCATAAGAAAGGTCAGGCACACTGGGAAGGCGATATCAAACGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAA", + "dna_sequence_length": 432, + "functions": [ + "lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance", + "salt-shock inducible membrane protein", + "peroxiredoxin" + ], + "id": "CDS_1469", + "location": [ + [ + "NC_000913", + 1556625, + "+", + 432 + ] + ], + "md5": "837eb6bd588c8ba30cc2a6dfe99bfabc", + "parent_gene": "", + "protein_md5": "07e6492c255a0b650400bb99932324d2", + "protein_translation": "MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS", + "protein_translation_length": 143, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004947" + ], + [ + "gene_synonym", + "ECK1477" + ], + [ + "gene_synonym", + "EcoGene:EG13786" + ], + [ + "gene_synonym", + "GI:16129442" + ], + [ + "gene_synonym", + "GeneID:946020" + ], + [ + "gene_synonym", + "JW1478" + ], + [ + "gene_synonym", + "NP_416000.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77622" + ], + [ + "gene_synonym", + "b1483" + ], + [ + "gene_synonym", + "ddpF" + ], + [ + "gene_synonym", + "yddO" + ] + ], + "dna_sequence": "GTGTCTGACACGTTATTAACGTTACGCGACGTCCATATCAATTTCCCGGCCCGTAAAAACTGGCTTGGTAAAACTACGGAACATGTTCATGCCATTAATGGTATTGATTTACAGATCCGCCGTGGTGAAACCTTAGGGATCGTCGGCGAGTCAGGCTGCGGCAAAAGCACCCTCGCACAGCTTTTAATGGGTATGCTGCAACCGAGCCACGGGCAGTACATCCGTTCTGGCTCACAACGCATTATGCAGATGGTGTTTCAGGACCCGCTCTCTTCGCTTAATCCGCGCTTACCGGTGTGGCGCATCATCACAGAACCGCTCTGGATAGCTAAGCGTAGTAGTGAACAACAGCGGCGAGCGTTGGCAGAGGAGTTGGCTGTGCAGGTGGGTATTCGTCCGGAGTATCTCGACCGCCTGCCTCATGCGTTCTCCGGCGGGCAGCGGCAACGTATCGCCATTGCCAGAGCACTCTCTTCGCAGCCTGACGTGATTGTGCTTGATGAGCCAACCTCTGCGCTGGATATCTCCGTTCAGGCGCAGATCCTCAATTTACTGGTAACGCTACAGGAAAATCACGGGCTGACCTATGTGCTGATTTCACACAATGTCTCGGTGATACGTCATATGAGCGATCGGGTGGCGGTGATGTATCTCGGGCAGATTGTAGAACTGGGCGACGCGCAGCAGGTGCTGACGGCACCTGCACATCCATACACCCGATTATTGCTGGATTCCCTCCCCGCCATTGATAAACCGCTGGAGGAAGAATGGGCATTACGTAAAACGGATCTGCCGGGAAACCGCACGTTGCCGCAAGGCTGTTTTTTCTACGAACGTTGCCCGCTGGCAACCCACGGATGTGAAGTCCGGCAATCATTAGCAATAAGGGAGGACGGACGTGAGCTCCGGTGCTGGCGGGCGCTGTAG", + "dna_sequence_length": 927, + "functions": [ + "D,D-dipeptide ABC transporter ATPase" + ], + "id": "CDS_1470", + "location": [ + [ + "NC_000913", + 1558038, + "-", + 927 + ] + ], + "md5": "3e1aff0ec45e655e33e8cb52b34e61ae", + "parent_gene": "", + "protein_md5": "d8bee2f022b1f8fdf7d9f7757fc16cf5", + "protein_translation": "MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLAIREDGRELRCWRAL", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004949" + ], + [ + "gene_synonym", + "ECK1478" + ], + [ + "gene_synonym", + "EcoGene:EG13787" + ], + [ + "gene_synonym", + "GI:16129443" + ], + [ + "gene_synonym", + "GeneID:946002" + ], + [ + "gene_synonym", + "JW1479" + ], + [ + "gene_synonym", + "NP_416001.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77268" + ], + [ + "gene_synonym", + "b1484" + ], + [ + "gene_synonym", + "ddpD" + ], + [ + "gene_synonym", + "yddP" + ] + ], + "dna_sequence": "ATGACCCAACCCGTTCTGGACATTCAACAACTGCATTTGAGTTTCCCCGGTTTTAACGGTGATGTTCACGCGCTCAACAATGTGTCCTTGCAGATTAACCGCGGTGAAATTGTCGGTCTGGTGGGAGAATCCGGCTCAGGTAAATCAGTCACCGCAATGCTGATTATGCGTCTGCTACCGACGGGCAGTTATTGCGTACATCGGGGGCAGATTTCCCTGCTGGGAGAAGATGTTCTTAACGCGCGGGAAAAACAGCTTCGTCAGTGGCGCGGCGCACGAGTGGCGATGATCTTTCAGGAACCGATGACCGCCCTCAATCCGACACGTCGAATAGGTCTTCAGATGATGGACGTGATCCGCCATCATCAACCAATAAGTCGTCGGGAAGCCAGAGCTAAAGCGATTGACCTGCTGGAAGAGATGCAAATCCCGGATGCCGTGGAAGTTATGTCGCGCTATCCGTTTGAGCTTTCAGGTGGTATGCGCCAGCGGGTAATGATTGCGCTGGCATTCTCCTGCGAGCCGCAATTGATTATTGCCGACGAACCGACTACGGCGCTGGACGTCACGGTGCAGTTGCAGGTACTGCGTTTGCTTAAACATAAAGCCCGCGCCAGTGGAACTGCGGTTCTGTTCATCAGCCATGATATGGCCGTGGTGTCGCAACTGTGCGATAGCGTTTACGTGATGTATGCCGGAAGCGTAATTGAAAGCGGCGTGACGGCAGACGTTATCCATCATCCCCGGCATCCGTATACCATTGGTTTGCTGCAATGCGCACCAGAACATGGAGTACCACGCCAGCTATTACCCGCCATTCCAGGGACGGTACCAAACCTCACCCATTTGCCTGACGGCTGCGCTTTTCGCGATCGTTGCTATGCGGCAGGTGCACAGTGTGAAAACGTCCCGGCGCTGACAGCGTGTGGTGACAACAACCAGCGCTGTGCCTGTTGGTATCCGCAGCAGGAGGTTATAAGTGTCTGA", + "dna_sequence_length": 987, + "functions": [ + "D,D-dipeptide ABC transporter ATPase" + ], + "id": "CDS_1471", + "location": [ + [ + "NC_000913", + 1559017, + "-", + 987 + ] + ], + "md5": "e87594215703bc7749199339d1fbe729", + "parent_gene": "", + "protein_md5": "3376089565e5e6932e81ddace09e7991", + "protein_translation": "MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004953" + ], + [ + "gene_synonym", + "ECK1479" + ], + [ + "gene_synonym", + "EcoGene:EG13788" + ], + [ + "gene_synonym", + "GI:16129444" + ], + [ + "gene_synonym", + "GeneID:946028" + ], + [ + "gene_synonym", + "JW1480" + ], + [ + "gene_synonym", + "NP_416002.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77463" + ], + [ + "gene_synonym", + "b1485" + ], + [ + "gene_synonym", + "ddpC" + ], + [ + "gene_synonym", + "yddQ" + ] + ], + "dna_sequence": "ATGATGCTAAGCGAGGAAACGTCCGCCGTACGCCCACAAAAACAAACGCGATTTAACGGTGCAAAACTGGTATGGATGCTGAAAGGCAGTCCGCTCACCGTGACCAGCGCAGTCATCATTGTATTAATGCTATTGATGATGATTTTTTCACCGTGGCTGGCGACGCATGATCCCAACGCCATTGATTTAACCGCCCGCCTTTTGCCGCCTTCTGCGGCGCACTGGTTTGGCACCGATGAAGTGGGACGCGATCTGTTTAGCCGCGTACTGGTCGGCAGTCAGCAATCAATTCTCGCCGGATTAGTCGTGGTTGCCATTGCGGGTATGATTGGTTCGCTACTCGGATGTCTATCCGGTGTGCTTGGTGGACGCGCAGACGCCATCATCATGCGCATCATGGACATTATGCTGTCGATTCCTTCGTTGGTACTGACAATGGCACTGGCTGCCGCTCTCGGGCCGAGTTTGTTTAACGCCATGCTGGCTATTGCTATTGTGCGAATTCCCTTTTATGTGCGCCTGGCGCGGGGGCAAGCATTAGTTGTACGCCAGTATACCTATGTTCAGGCGGCGAAAACCTTTGGCGCGTCTCGTTGGCATCTGATCAACTGGCATATTTTACGTAACTCCCTACCGCCGCTGATCGTGCAGGCATCGCTGGATATCGGTAGCGCGATTTTAATGGCCGCCACGTTGGGATTTATTGGCCTGGGTGCTCAACAACCGAGTGCTGAATGGGGCGCGATGGTAGCAAATGGTCGCAACTATGTACTCGATCAGTGGTGGTATTGCGCATTTCCGGGGGCAGCGATTTTGCTTACCGCCGTCGGGTTTAATCTCTTTGGTGATGGTATTCGCGATCTGCTTGACCCGAAAGCAGGAGGAAAGCAGTCATGA", + "dna_sequence_length": 897, + "functions": [ + "D,D-dipeptide ABC transporter permease" + ], + "id": "CDS_1472", + "location": [ + [ + "NC_000913", + 1559910, + "-", + 897 + ] + ], + "md5": "54d09f54443a9b3297da3aa6dbfebe38", + "parent_gene": "", + "protein_md5": "69b1fb4d2afbbf4b253bc1f265e81454", + "protein_translation": "MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004955" + ], + [ + "gene_synonym", + "ECK1480" + ], + [ + "gene_synonym", + "EcoGene:EG13789" + ], + [ + "gene_synonym", + "GI:16129445" + ], + [ + "gene_synonym", + "GeneID:946044" + ], + [ + "gene_synonym", + "JW1481" + ], + [ + "gene_synonym", + "NP_416003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77308" + ], + [ + "gene_synonym", + "b1486" + ], + [ + "gene_synonym", + "ddpB" + ], + [ + "gene_synonym", + "yddR" + ] + ], + "dna_sequence": "GTGACCTTCTGGAGTATTTTACGCCAACGCTGCTGGGGGCTGGTGCTCGTGGTGGCGGGCGTCTGCGTGATTACGTTTATTATCTCGCATCTGATCCCTGGTGATCCGGCGCGGTTACTGGCGGGTGACCGCGCCAGCGATGCTATCGTGGAAAATATTCGCCAGCAACTGGGACTGGACCAGCCACTGTATGTACAGTTTTACCGCTACGTCAGCGACCTGTTTCATGGTGACCTGGGAACATCCATTCGTACCGGGCGTCCGGTGCTGGAAGAGTTGCGTATATTTTTCCCGGCGACGCTGGAGCTGGCTTTTGGTGCCCTGCTGCTGGCACTCCTGATTGGCATCCCGCTGGGCATACTCTCTGCAGTCTGGCGAAATCGCTGGCTGGATCATCTGGTGCGAATAATGGCCATTACCGGAATCTCCACACCTGCGTTCTGGCTTGGGCTGGGCGTCATTGTGCTGTTTTATGGTCATCTGCAAATTCTTCCCGGCGGCGGAAGGCTTGATGACTGGCTGGATCCACCAACGCACGTTACCGGCTTTTATCTGCTCGATGCGCTGCTTGAAGGCAACGGTGAAGTCTTCTTCAATGCGTTGCAACATCTCATCTTACCGGCATTAACGCTGGCGTTCGTTCACCTGGGAATTGTCGCTCGCCAGATCCGCTCAGCGATGCTGGAACAATTGAGTGAAGACTACATTCGTACCGCCCGGGCCAGCGGCTTGCCCGGCTGGTATATCGTTTTATGTTATGCGCTACCCAATGCGTTGATCCCATCGATTACCGTATTGGGTTTGGCGCTGGGCGATTTGTTGTATGGCGCAGTGCTCACCGAAACCGTTTTTGCCTGGCCCGGAATGGGTGCATGGGTAGTAACATCAATACAGGCGCTCGACTTCCCGGCAGTGATGGGCTTTGCCGTCGTGGTTTCATTTGCTTATGTGCTGGTCAACCTGGTGGTGGATTTGCTCTATTTGTGGATTGATCCGCGTATCGGACGTGGAGGTGGTGAATGA", + "dna_sequence_length": 1023, + "functions": [ + "D,D-dipeptide ABC transporter permease" + ], + "id": "CDS_1473", + "location": [ + [ + "NC_000913", + 1560929, + "-", + 1023 + ] + ], + "md5": "710fdb2c81f0e9f9d8068bb0030ef6d2", + "parent_gene": "", + "protein_md5": "0ae3bbb4665fc4cc6a9b126cec50c649", + "protein_translation": "MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004958" + ], + [ + "gene_synonym", + "ECK1481" + ], + [ + "gene_synonym", + "EcoGene:EG13790" + ], + [ + "gene_synonym", + "GI:16129446" + ], + [ + "gene_synonym", + "GeneID:946052" + ], + [ + "gene_synonym", + "JW5240" + ], + [ + "gene_synonym", + "NP_416004.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76128" + ], + [ + "gene_synonym", + "b1487" + ], + [ + "gene_synonym", + "ddpA" + ], + [ + "gene_synonym", + "yddS" + ] + ], + "dna_sequence": "ATGAAGAGATCGATATCGTTTCGTCCCACATTGCTCGCGCTCGTCCTTGCCACAAATTTCCCGGTTGCGCACGCCGCCGTACCAAAAGATATGCTGGTGATTGGTAAGGCCGCCGATCCACAAACCCTCGACCCGGCGGTAACAATAGATAATAACGACTGGACAGTGACCTACCCGTCTTATCAGCGGCTGGTTCAGTACAAAACGGACGGTGATAAAGGCTCAACCGACGTTGAAGGCGATCTGGCAAGTAGCTGGAAAGCGTCTGACGATCAAAAAGAGTGGACGTTCACCCTGAAAGATAATGCTAAATTTGCCGATGGCACACCTGTCACTGCCGAAGCAGTAAAACTTTCTTTTGAGCGGCTACTAAAAATCGGCCAGGGGCCAGCAGAAGCATTTCCCAAAGATTTAAAGATTGATGCTCCCGACGAACATACGGTGAAGTTTACCCTTAGCCAACCATTCGCACCGTTCCTCTACACGCTGGCGAATGACGGTGCATCCATTATCAATCCGGCGGTCTTAAAGGAACATGCAGCGGATGATGCTCGCGGCTTCCTCGCGCAAAATACCGCCGGTTCCGGACCATTTATGCTGAAAAGCTGGCAAAAAGGTCAGCAATTAGTTCTGGTGCCAAATCCGCATTACCCAGGCAATAAACCGAACTTCAAACGGGTATCGGTAAAAATTATTGGTGAAAGTGCCTCCCGTCGCCTGCAGCTCTCCCGTGGCGACATTGACATTGCCGATGCGCTGCCGGTGGATCAACTCAACGCCCTGAAGCAGGAAAATAAAGTCAATGTGGCAGAGTATCCGTCACTGCGCGTTACCTATCTGTATCTGAATAACAGCAAAGCGCCTCTTAATCAGGCGGATCTGCGTCGGGCCATTTCCTGGTCTACCGATTATCAGGGCATGGTTAACGGCATTCTGAGTGGTAACGGAAAACAGATGCGCGGCCCGATTCCGGAAGGCATGTGGGGCTACGATGCGACGGCAATGCAATACAACCATGACGAAACGAAAGCCAAAGCCGAATGGGATAAAGTGACGAGCAAACCCACCAGCCTGACGTTTCTCTACTCCGATAACGATCCGAACTGGGAGCCTATTGCTCTGGCGACACAATCCAGTCTCAACAAGCTGGGCATCATTGTGAAGCTGGAAAAGCTGGCGAACGCCACCATGCGCGACAGAGTGGGTAAAGGTGATTACGACATTGCGATTGGCAACTGGAGTCCGGATTTTGCCGACCCGTATATGTTTATGAATTACTGGTTTGAGTCAGACAAAAAAGGTCTGCCGGGTAACCGCTCGTTCTATGAAAACAGTGAGGTCGATAAGTTACTGCGCAATGCGCTTGCGACCACCGACCAGACGCAGCGTACCCGGGACTACCAGCAGGCACAGAAAATCGTCATTGATGACGCTGCTTATGTGTACCTGTTCCAGAAAAACTACCAACTGGCGATGAACAAAGAGGTGAAAGGCTTTGTGTTCAATCCCATGCTGGAACAGGTCTTCAATATCAATACCATGAGTAAATAA", + "dna_sequence_length": 1551, + "functions": [ + "D,D-dipeptide ABC transporter periplasmic binding protein" + ], + "id": "CDS_1474", + "location": [ + [ + "NC_000913", + 1562481, + "-", + 1551 + ] + ], + "md5": "ecdbb4b64ac3ee3b335874b0607ab32e", + "parent_gene": "", + "protein_md5": "c2ca9940392015bff489ca1213c49a3c", + "protein_translation": "MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTFLYSDNDPNWEPIALATQSSLNKLGIIVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK", + "protein_translation_length": 516, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004960" + ], + [ + "gene_synonym", + "ECK1482" + ], + [ + "gene_synonym", + "EcoGene:EG13791" + ], + [ + "gene_synonym", + "GI:16129447" + ], + [ + "gene_synonym", + "GeneID:945532" + ], + [ + "gene_synonym", + "JW1483" + ], + [ + "gene_synonym", + "NP_416005.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77790" + ], + [ + "gene_synonym", + "b1488" + ], + [ + "gene_synonym", + "ddpX" + ], + [ + "gene_synonym", + "vanX" + ], + [ + "gene_synonym", + "yddT" + ] + ], + "dna_sequence": "ATGTCGGATACCACCGAACTGGTTGATTTAGCCGTAATCTTCCCTGATCTGGAGATCGAATTGAAATACGCCTGCGCTGATAACATCACAGGTAAAGCTATTTATCAGCAAGCGCGTTGTCTGTTACACAAGGATGCGATTACCGCGCTGGCGAAAAGTATCAGCATCGCCCAGCTGTCAGGGTTACAACTGGTGATTTACGATGCGTATCGCCCACAACAAGCACAGGCGATGTTGTGGCAAGCCTGCCCAGACCCGCAATATGTTGTTGATGTGACGGTCGGTTCTAATCACAGCCGTGGCACGGCGATCGACCTGACGCTTCGTGATGAGCACGGGAACATCCTCGATATGGGCGCAGGGTTCGATGAAATGCACGAGCGCTCCCATGCCTATCACCCTTCCGTCCCGCCCGCCGCTCAGCGCAATCGGCTGTTGCTGAATGCGATAATGACTGGTGGCGGTTTTGTCGGTATCTCCAGCGAATGGTGGCACTTCGAATTACCCCAGGCAGCGAGTTACCCTCTGCTCGCTGATCAATTCTCTTGTTTTATATCCCCTGGCACACAGCACGTCAGTTAA", + "dna_sequence_length": 582, + "functions": [ + "D-ala-D-ala dipeptidase, Zn-dependent" + ], + "id": "CDS_1475", + "location": [ + [ + "NC_000913", + 1563076, + "-", + 582 + ] + ], + "md5": "310fcb526b64fc74a1ec482345217742", + "parent_gene": "", + "protein_md5": "aaa12b35867f101c0057294ada43f71f", + "protein_translation": "MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQFSCFISPGTQHVS", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004963" + ], + [ + "gene_synonym", + "ECK1483" + ], + [ + "gene_synonym", + "EcoGene:EG13792" + ], + [ + "gene_synonym", + "GI:162135902" + ], + [ + "gene_synonym", + "GeneID:945815" + ], + [ + "gene_synonym", + "JW1484" + ], + [ + "gene_synonym", + "NP_416006.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76129" + ], + [ + "gene_synonym", + "b1489" + ], + [ + "gene_synonym", + "dos" + ], + [ + "gene_synonym", + "dosP" + ], + [ + "gene_synonym", + "yddU" + ] + ], + "dna_sequence": "ATGAAGCTAACCGATGCGGATAATGCCGCCGATGGCATTTTTTTCCCCGCCCTTGAGCAAAATATGATGGGTGCGGTGTTAATTAACGAAAATGATGAAGTGATGTTTTTCAACCCCGCCGCAGAGAAGCTCTGGGGATACAAACGTGAAGAAGTCATTGGCAATAACATTGATATGCTGATTCCGCGGGATTTGCGTCCTGCGCATCCTGAATACATTCGTCACAACCGTGAAGGCGGTAAAGCGCGTGTTGAGGGGATGAGTCGGGAGCTGCAGCTGGAGAAAAAAGACGGCAGTAAAATCTGGACCCGTTTTGCGCTATCGAAAGTGAGCGCCGAGGGGAAAGTTTATTACCTGGCGCTGGTACGGGATGCCAGCGTAGAAATGGCGCAAAAAGAACAGACCCGACAATTGATTATTGCCGTTGACCATCTCGACCGACCGGTGATTGTCCTCGATCCGGAACGCCATATTGTGCAGTGCAATCGCGCATTTACCGAAATGTTTGGTTACTGCATTAGCGAAGCCAGCGGTATGCAGCCCGATACACTCCTGAACATTCCTGAATTCCCTGCCGATAACCGCATTCGTTTACAACAGTTGCTATGGAAAACCGCCCGCGATCAGGACGAATTTCTGCTGTTGACGCGCACCGGTGAAAAAATCTGGATTAAAGCCTCTATCAGCCCGGTTTATGACGTGCTCGCGCATCTGCAGAACCTGGTAATGACTTTCTCGGATATCACCGAAGAACGGCAGATTCGCCAGCTTGAAGGCAATATTCTCGCCGCCATGTGCAGCAGCCCGCCATTTCATGAAATGGGGGAAATCATTTGTCGTAACATCGAATCTGTACTCAACGAATCGCATGTTTCGCTGTTCGCACTGCGCAACGGGATGCCGATACACTGGGCGTCATCTTCCCACGGTGCAGAAATTCAAAATGCGCAAAGCTGGTCAGCGACCATTCGTCAGCGTGATGGCGCGCCTGCGGGGATCCTGCAAATTAAAACCTCGTCAGGAGCAGAAACCAGCGCCTTTATCGAACGCGTGGCAGATATCAGCCAGCATATGGCCGCGCTGGCGCTGGAACAGGAAAAAAGCCGTCAGCATATTGAACAACTCATCCAATTTGATCCGATGACCGGTCTGCCAAATCGCAATAACCTGCACAATTACCTCGATGACCTGGTCGACAAAGCCGTCTCTCCCGTGGTGTATCTCATCGGTGTTGACCATATTCAGGATGTGATTGATAGCCTTGGCTATGCGTGGGCCGATCAGGCATTGCTGGAAGTGGTCAATCGCTTTCGTGAAAAACTCAAACCGGATCAGTATCTCTGTCGTATCGAAGGTACGCAGTTTGTCCTCGTGAGCCTCGAAAACGACGTCAGTAACATTACCCAAATCGCCGATGAGCTACGGAATGTGGTCAGCAAGCCGATAATGATTGACGATAAACCCTTCCCGCTTACCTTGAGTATTGGCATCAGCTACGACCTGGGTAAAAACCGCGATTACTTGCTCTCCACTGCTCACAATGCAATGGATTATATTCGCAAGAATGGCGGTAACGGCTGGCAGTTCTTCAGCCCGGCGATGAACGAAATGGTAAAAGAGCGTTTGGTTTTAGGCGCAGCGCTGAAAGAAGCGATTAGCAATAACCAACTGAAACTGGTTTACCAGCCGCAAATCTTCGCAGAAACGGGTGAACTGTACGGCATCGAAGCCCTTGCTCGCTGGCACGATCCCCTGCATGGTCATGTGCCCCCTTCACGGTTTATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCCGTCAGTTAGCAGAATGGCGTAGCCAGAATATTCATATCCCGGCGTTATCCGTGAACTTGTCGGCGCTGCACTTTCGCAGTAATCAACTGCCTAATCAGGTGTCTGATGCAATGCACGCCTGGGGTATTGACGGCCACCAGCTGACGGTAGAAATCACGGAAAGCATGATGATGGAACACGATACCGAAATCTTTAAGCGCATTCAGATCCTGCGTGATATGGGCGTGGGCTTATCGGTAGATGATTTTGGTACGGGCTTTTCCGGATTATCCCGCTTAGTCAGTCTTCCGGTAACGGAAATCAAAATTGACAAAAGTTTTGTCGATCGTTGTCTGACCGAAAAACGCATCCTTGCCTTACTTGAAGCCATTACCAGCATTGGGCAAAGCCTCAATTTAACCGTCGTGGCGGAAGGCGTCGAAACCAAAGAGCAATTTGAGATGCTACGCAAGATCCACTGTCGCGTTATTCAGGGATATTTCTTTTCCCGCCCCCTACCCGCCGAAGAAATTCCAGGCTGGATGAGCAGCGTGTTACCGCTGAAAATCTGA", + "dna_sequence_length": 2400, + "functions": [ + "oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated", + "cold- and stationary phase-induced bioflim regulator" + ], + "id": "CDS_1476", + "location": [ + [ + "NC_000913", + 1565733, + "-", + 2400 + ] + ], + "md5": "71bebf6453d90630d4f38c4d34daf458", + "parent_gene": "", + "protein_md5": "2f590e20b0671568b11a3fa93077b79c", + "protein_translation": "MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI", + "protein_translation_length": 799, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004965" + ], + [ + "gene_synonym", + "ECK1484" + ], + [ + "gene_synonym", + "EcoGene:EG13793" + ], + [ + "gene_synonym", + "GI:145698262" + ], + [ + "gene_synonym", + "GeneID:945835" + ], + [ + "gene_synonym", + "JW5241" + ], + [ + "gene_synonym", + "NP_416007.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA89" + ], + [ + "gene_synonym", + "b1490" + ], + [ + "gene_synonym", + "dosC" + ], + [ + "gene_synonym", + "yddV" + ] + ], + "dna_sequence": "ATGGAGATGTATTTTAAAAGAATGAAAGATGAGTGGACCGGACTTGTCGAACAGGCAGATCCGCCCATTCGTGCTAAAGCCGCGGAAATTGCCGTTGCGCATGCTCATTATCTGAGTATCGAGTTTTATCGAATTGTCCGCATCGACCCGCATGCCGAAGAATTCTTGAGTAATGAACAAGTTGAGCGGCAGTTGAAGAGTGCGATGGAACGCTGGATTATTAACGTGCTTTCTGCCCAGGTTGACGATGTCGAAAGGCTAATACAAATCCAGCATACCGTCGCGGAAGTGCATGCCCGCATAGGAATTCCGGTAGAAATTGTCGAGATGGGGTTTCGGGTGCTGAAAAAAATCCTCTATCCGGTGATCTTCTCTTCGGATTATTCCGCCGCAGAAAAACTTCAGGTCTACCATTTCTCGATTAACAGTATTGATATCGCGATGGAAGTGATGACTCGCGCGTTTACCTTTAGTGACAGTAGTGCCTCAAAGGAAGATGAAAACTATCGTATCTTCTCGTTACTGGAAAACGCCGAAGAAGAAAAAGAACGGCAAATAGCCTCAATACTTTCATGGGAAATAGATATTATCTATAAAATCCTGCTGGATTCTGATTTAGGCAGTAGTTTGCCTTTAAGCCAGGCTGATTTTGGCCTGTGGTTTAACCATAAAGGTCGACATTATTTTAGTGGTATTGCCGAAGTAGGCCATATCTCCCGTCTGATTCAGGATTTCGACGGTATTTTCAATCAAACCATGCGTAACACCAGAAATTTGAATAACAGAAGTCTGCGGGTGAAATTTTTATTACAGATAAGAAATACCGTATCGCAAATTATTACCTTGCTGCGTGAATTGTTTGAAGAAGTATCGCGCCACGAAGTCGGTATGGATGTACTGACGAAATTACTTAACCGCCGTTTCCTACCGACTATCTTCAAACGCGAAATTGCCCATGCCAACCGGACCGGTACACCGCTGTCAGTGCTGATTATTGACGTTGATAAATTCAAAGAGATCAACGATACGTGGGGCCATAACACTGGTGATGAAATTCTGCGTAAAGTCTCTCAGGCCTTTTATGACAACGTCCGCAGTAGTGATTATGTTTTCCGCTACGGGGGCGATGAATTTATCATTGTTTTGACTGAAGCTTCTGAAAACGAAACGTTACGTACCGCAGAACGTATTCGCAGTCGGGTGGAGAAAACCAAACTGAAAGCCGCAAACGGCGAAGATATTGCCCTCTCACTTTCCATCGGTGCCGCCATGTTTAATGGTCATCCTGACTATGAGCGCCTCATTCAAATAGCCGATGAAGCTCTGTATATCGCCAAAAGACGAGGTAGAAACCGTGTTGAACTCTGGAAAGCCAGTCTTTAG", + "dna_sequence_length": 1383, + "functions": [ + "diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator" + ], + "id": "CDS_1477", + "location": [ + [ + "NC_000913", + 1567140, + "-", + 1383 + ] + ], + "md5": "4fc52d497df8bdb7ff4c0f699e411efc", + "parent_gene": "", + "protein_md5": "b2cd9c6510aebc7d393c832dbc8f0778", + "protein_translation": "MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004970" + ], + [ + "gene_synonym", + "ECK1485" + ], + [ + "gene_synonym", + "EcoGene:EG13794" + ], + [ + "gene_synonym", + "GI:16129450" + ], + [ + "gene_synonym", + "GeneID:945975" + ], + [ + "gene_synonym", + "JW1486" + ], + [ + "gene_synonym", + "NP_416008.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64426" + ], + [ + "gene_synonym", + "b1491" + ], + [ + "gene_synonym", + "yddW" + ] + ], + "dna_sequence": "ATGGATATCTGCTCCCGAAACAAGAAATTAACGATTAGAAGACCAGCGATACTAGTTGCACTGGCACTTTTACTGTGTAGTTGTAAAAGCACGCCTCCAGAGTCCATGGTGACACCACCAGCAGGTTCAAAGCCACCAGCCACGACGCAACAATCGTCACAACCGATGCGTGGCATCTGGCTGGCCACGGTTTCTCGGCTCGACTGGCCACCGGTTTCCTCGGTTAACATTAGTAACCCCACCAGCCGGGCCCGTGTACAACAACAGGCGATGATCGACAAACTGGATCATCTGCAACGTCTCGGCATAAACACGGTCTTTTTCCAGGTCAAGCCGGACGGTACCGCCCTGTGGCCATCGAAAATTTTGCCGTGGTCCGATCTTATGACCGGTAAGATTGGTGAAAATCCGGGTTACGATCCGCTGCAATTTATGCTCGACGAAGCCCACAAGCGTGGGATGAAAGTACACGCCTGGTTTAACCCCTATCGCGTATCGGTTAATACGAAGCCCGGTACTATCAGGGAACTGAATAGCACTCTGTCTCAACAACCGGCGAGCGTCTATGTGCAACACCGCGACTGGATCAGAACGTCTGGCGATCGCTTTGTCCTCGACCCGGGCATCCCTGAGGTTCAGGACTGGATCACATCAATAGTCGCAGAAGTGGTTTCCCGCTATCCCGTAGATGGCGTGCAGTTTGACGACTATTTCTATACGGAGTCACCGGGTTCACGGCTAAATGATAACGAAACGTACCGTAAATACGGAGGCGCATTTGCGTCAAAAGCAGACTGGCGGCGCAACAATACTCAGCAGTTAATTGCAAAGGTATCGCACACCATTAAAAGCATTAAGCCGGGAGTCGAATTTGGTGTTAGCCCGGCAGGCGTGTGGCGTAACCGATCACACGATCCGCTCGGTTCCGATACCCGAGGCGCGGCAGCCTATGACGAATCCTACGCTGACACCCGTCGATGGGTGGAACAAGGATTGCTGGATTACATTGCTCCCCAAATTTACTGGCCGTTCTCACGGAGTGCCGCGCGTTATGACGTGTTGGCAAAATGGTGGGCGGATGTCGTTAAACCGACCAGGACCCGCCTGTATATCGGTATCGCCTTCTATAAAGTGGGTGAACCTTCAAAGATAGAGCCAGACTGGATGATTAACGGCGGCGTACCGGAACTGAAAAAGCAGCTCGATCTTAACGATGCTGTGCCCGAAATTAGCGGCACCATCTTGTTCCGTGAGGACTATCTGAATAAACCGCAGACTCAACAAGCGGTCAGCTATCTGCAAAGTCGCTGGGGCAGTTAA", + "dna_sequence_length": 1320, + "functions": [ + "liprotein, glycosyl hydrolase homolog" + ], + "id": "CDS_1478", + "location": [ + [ + "NC_000913", + 1568823, + "-", + 1320 + ] + ], + "md5": "fccc2845d292211406e0b04920fb76d9", + "parent_gene": "", + "protein_md5": "6333ba099b7dc5ad261d9388411a5567", + "protein_translation": "MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSKPPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004973" + ], + [ + "gene_synonym", + "ECK1486" + ], + [ + "gene_synonym", + "EcoGene:EG12456" + ], + [ + "gene_synonym", + "GI:16129451" + ], + [ + "gene_synonym", + "GeneID:946057" + ], + [ + "gene_synonym", + "JW1487" + ], + [ + "gene_synonym", + "NP_416009.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63235" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "b1492" + ], + [ + "gene_synonym", + "gadC" + ], + [ + "gene_synonym", + "xasA" + ] + ], + "dna_sequence": "ATGGCTACATCAGTACAGACAGGTAAAGCTAAGCAGCTCACATTACTTGGATTCTTTGCCATAACGGCATCGATGGTAATGGCTGTTTATGAATACCCTACCTTCGCAACATCGGGCTTTTCATTAGTCTTCTTCCTGCTATTAGGCGGGATTTTATGGTTTATTCCCGTGGGACTTTGTGCTGCGGAAATGGCCACCGTCGACGGCTGGGAAGAAGGTGGTGTCTTCGCCTGGGTATCAAATACTCTGGGGCCGAGATGGGGATTTGCAGCGATCTCATTTGGCTATCTGCAAATCGCCATTGGTTTTATTCCGATGCTCTATTTCGTGTTAGGGGCACTCTCCTACATCCTGAAATGGCCAGCGCTGAATGAAGACCCCATTACCAAAACTATTGCAGCACTCATCATTCTTTGGGCGCTGGCATTAACGCAGTTTGGTGGCACGAAATACACGGCGCGAATTGCTAAAGTTGGCTTCTTCGCCGGTATCCTGTTACCTGCATTTATTTTGATCGCATTAGCGGCTATTTATCTGCACTCCGGTGCCCCCGTTGCTATCGAAATGGATTCGAAGACCTTCTTCCCTGACTTCTCTAAAGTGGGCACCCTGGTAGTATTTGTTGCCTTCATTTTGAGTTATATGGGCGTAGAAGCATCCGCAACCCACGTCAATGAAATGAGCAACCCAGGGCGCGACTATCCGTTGGCTATGTTACTGCTGATGGTGGCGGCAATCTGCTTAAGCTCTGTTGGTGGTTTGTCTATTGCGATGGTCATTCCGGGTAATGAAATCAACCTCTCCGCAGGGGTAATGCAAACCTTTACCGTTCTGATGTCCCATGTGGCACCAGAAATTGAGTGGACGGTTCGCGTGATCTCCGCACTGCTGTTGCTGGGTGTTCTGGCGGAAATCGCCTCCTGGATTGTTGGTCCTTCTCGCGGGATGTATGTAACAGCGCAGAAAAACCTGCTGCCAGCGGCATTCGCTAAAATGAACAAAAATGGCGTACCGGTAACGCTGGTCATTTCGCAGCTGGTGATTACGTCTATCGCGTTGATCATCCTCACCAATACCGGTGGCGGTAACAACATGTCCTTCCTGATCGCACTGGCGCTGACGGTGGTGATTTATCTGTGTGCTTATTTCATGCTGTTTATTGGCTACATTGTGTTGGTTCTTAAACATCCTGACTTAAAACGCACATTTAATATCCCTGGTGGTAAAGGGGTGAAACTGGTCGTGGCAATTGTCGGTCTGCTGACTTCAATTATGGCGTTTATTGTTTCCTTCCTGCCGCCGGATAACATCCAGGGTGATTCTACCGATATGTATGTTGAATTACTGGTTGTTAGTTTCCTGGTGGTACTTGCCCTGCCCTTTATTCTCTATGCTGTTCATGATCGTAAAGGCAAAGCAAATACCGGCGTCACTCTGGAGCCAATCAACAGTCAGAACGCACCAAAAGGTCACTTCTTCCTGCACCCGCGTGCACGTTCACCACACTATATTGTGATGAATGACAAGAAACACTAA", + "dna_sequence_length": 1536, + "functions": [ + "glutamate:gamma-aminobutyric acid antiporter" + ], + "id": "CDS_1479", + "location": [ + [ + "NC_000913", + 1570489, + "-", + 1536 + ] + ], + "md5": "d3a094db2573df41a6235e7f7d745981", + "parent_gene": "", + "protein_md5": "1eb6f5d3c5a435f999a6c3dca49a68d4", + "protein_translation": "MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH", + "protein_translation_length": 511, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004976" + ], + [ + "gene_synonym", + "ECK1487" + ], + [ + "gene_synonym", + "EcoGene:EG11490" + ], + [ + "gene_synonym", + "GI:16129452" + ], + [ + "gene_synonym", + "GeneID:946058" + ], + [ + "gene_synonym", + "JW1488" + ], + [ + "gene_synonym", + "NP_416010.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69910" + ], + [ + "gene_synonym", + "b1493" + ], + [ + "gene_synonym", + "gadB" + ] + ], + "dna_sequence": "ATGGATAAGAAGCAAGTAACGGATTTAAGGTCGGAACTACTCGATTCACGTTTTGGTGCGAAGTCTATTTCCACTATCGCAGAATCAAAACGTTTTCCGCTGCACGAAATGCGCGACGATGTCGCATTCCAGATTATCAATGACGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAATGTCCACAAATTGATGGATTTATCCATTAACAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACTGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGATACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTATGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAACAGAACAGCTTTAAACATACCTGA", + "dna_sequence_length": 1401, + "functions": [ + "glutamate decarboxylase B, PLP-dependent" + ], + "id": "CDS_1480", + "location": [ + [ + "NC_000913", + 1572045, + "-", + 1401 + ] + ], + "md5": "71a7577ce124ebd0c4488c984f482ac9", + "parent_gene": "", + "protein_md5": "36a9a4610ce76e5efc5008059008fecd", + "protein_translation": "MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004979" + ], + [ + "gene_synonym", + "ECK1488" + ], + [ + "gene_synonym", + "EcoGene:EG11744" + ], + [ + "gene_synonym", + "GI:16129453" + ], + [ + "gene_synonym", + "GeneID:946059" + ], + [ + "gene_synonym", + "JW1489" + ], + [ + "gene_synonym", + "NP_416011.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31828" + ], + [ + "gene_synonym", + "b1494" + ], + [ + "gene_synonym", + "pqqE" + ], + [ + "gene_synonym", + "pqqL" + ], + [ + "gene_synonym", + "pqqM" + ], + [ + "gene_synonym", + "yddC" + ] + ], + "dna_sequence": "ATGGAGATAATTATGAGAAACCTCTGTTTCTTACTGACGTTAGTGGCAACTCTGTTGCTCCCCGGGCGGCTGATTGCCGCCGCCTTACCGCAGGATGAAAAGTTAATTACCGGGCAACTGGACAATGGCTTGCGATATATGATTTATCCGCATGCTCATCCAAAGGATCAGGTAAATTTATGGCTGCAAATTCATACCGGTTCATTGCAGGAAGAAGACAATGAGCTCGGCGTGGCTCATTTTGTAGAACATATGATGTTTAACGGCACAAAAACATGGCCGGGTAATAAAGTCATCGAAACATTTGAGTCAATGGGCCTGCGTTTTGGTCGCGATGTTAATGCCTATACCAGCTATGACGAAACGGTGTATCAGGTGAGTTTGCCGACTACGCAGAAACAAAATCTGCAACAAGTGATGGCAATCTTCAGTGAATGGAGTAATGCCGCAACCTTTGAAAAACTCGAAGTAGACGCTGAACGTGGCGTAATTACTGAGGAATGGCGTGCCCATCAGGATGCGAAATGGCGCACCTCTCAGGCGCGCCGCCCTTTCCTGCTGGCAAATACCCGTAATTTAGACCGTGAACCTATCGGCCTGATGGATACTGTCGCCACGGTCACACCGGCACAATTGCGCCAATTTTATCAACGCTGGTATCAACCAAATAATATGACCTTTATCGTGGTCGGCGATATCGACAGTAAAGAAGCGCTGGCGCTGATAAAGGATAATTTAAGTAAGCTTCCGGCTAACAAAGCAGCTGAAAATCGCGTCTGGCCGACAAAAGCCGAAAACCACCTGCGCTTTAATATCATTAATGATAAAGAAAACCGGGTGAACGGCATCGCACTCTATTATCGCCTGCCAATGGTACAAGTGAACGATGAGCAAAGCTTTATCGAACAAGCTGAATGGAGCATGTTAGTTCAGCTGTTCAATCAACGTCTGCAGGAACGCATACAGTCGGGCGAGTTGAAGACTATTTCTGGCGGCACTGCGCGCAGCGTTAAAATTGCACCCGATTATCAGTCGCTGTTTTTCCGTGTAAATGCACGAGACGATAATATGCAGGATGCTGCGAATGCATTAATGGCAGAGTTGGCAACCATTGATCAGCATGGTTTTTCTGCTGAAGAACTCGATGATGTCAAATCTACCCGCCTCACCTGGCTGAAAAATGCGGTTGATCAGCAAGCTGAACGTGATTTACGTATGCTGACCAGTCGCCTGGCATCCAGCTCATTAAATAATACGCCGTTCTTGTCGCCGGAAGAGACATATCAACTTTCGAAACGTCTGTGGCAGCAAATTACCGTGCAAAGTCTGGCGGAAAAATGGCAGCAGTTAAGAAAGAACCAGGACGCATTTTGGGAGCAAATGGTAAACAATGAGGTTGCCGCCAAAAAAGCATTGTCTCCTGCGGCTATCCTGGCGCTGGAAAAGGAGTACGCCAACAAAAAGCTGGCGGCTTACGTCTTCCCAGGCAGAAATTTATCGTTAACAGTAGACGCAGACCCACAGGCGGAAATTAGCAGCAAAGAAACGCTGGCGGAGAATCTGACATCATTAACACTTTCCAATGGTGCCAGGGTTATTCTGGCAAAATCCGCGGGTGAAGAGCAAAAGCTACAAATTATTGCCGTATCGAATAAAGGCGATTTAAGTTTCCCTGCGCAGCAAAAATCACTTATCGCGCTGGCAAATAAAGCAGTTAGCGGAAGCGGCGTTGGCGAACTCTCCTCTTCCAGCCTGAAACGCTGGAGTGCGGAAAATTCGGTAACCATGAGCAGTAAAGTCAGTGGCATGAATACGTTGCTCTCCGTTAGCGCGCGGACTAATAACCCTGAACCTGGTTTTCAGTTGATTAACCAGCGAATCACCCACAGCACGATTAACGATAATATTTGGGCATCGCTACAAAATGCTCAAATTCAGGCGTTGAAAACGCTCGACCAGCGTCCAGCGGAGAAATTCGCCCAGCAGATGTATGAGACGCGCTATGCTGATGACCGCACGAAATTACTGCAAGAAAATCAGATTGCACAGTTTACTGCCGCAGATGCGCTGGCTGCCGATCGCCAATTGTTTTCATCTCCAGCGGATATCACGTTTGTCATTGTCGGTAATGTCGCAGAAGACAAACTCGTGGCGTTAATTACGCGTTACTTAGGATCAATCAAACACTCTGATTCGCCATTAGCCGCAGGTAAACCATTAACTCGCGCGACGGACAACGCATCGGTTACTGTAAAAGAACAAAATGAACCTGTGGCACAGGTTTCACAGTGGAAGCGTTATGATTCCCGGACACCTGTTAATCTGCCGACGCGTATGGCGCTCGATGCTTTTAACGTCGCACTGGCAAAAGATCTACGTGTTAATATTCGTGAACAGGCATCTGGAGCATACAGCGTTTCTTCTCGCCTCTCGGTTGATCCTCAGGCCAAAGATATCAGTCATTTGCTGGCTTTTACTTGTCAACCAGAACGACATGATGAACTGTTAACGTTAGCGAATGAAGTGATGGTTAAGCGTCTGGCTAAAGGGATCAGTGAGCAAGAACTGAATGAATACCAGCAAAACGTTCAGCGCAGCCTCGATATCCAACAGCGTAGCGTTCAACAATTAGCGAACACTATTGTAAATAGTCTTATTCAATATGACGATCCTGCAGCATGGACTGAGCAGGAGCAATTGTTGAAACAAATGACGGTAGAGAATGTTAACACTGCCGTTAAACAATATCTTTCTCATCCGGTAAATACTTATACCGGAGTATTATTGCCAAAATAA", + "dna_sequence_length": 2796, + "functions": [ + "putative periplasmic M16 family zinc metalloendopeptidase" + ], + "id": "CDS_1481", + "location": [ + [ + "NC_000913", + 1575202, + "-", + 2796 + ] + ], + "md5": "fc2a95392a1486d3c94146f36a934b9e", + "parent_gene": "", + "protein_md5": "df5ef317d3b1b72f30cdc46e72bcf1ad", + "protein_translation": "MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK", + "protein_translation_length": 931, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004982" + ], + [ + "gene_synonym", + "ECK1489" + ], + [ + "gene_synonym", + "EcoGene:EG11743" + ], + [ + "gene_synonym", + "GI:16129454" + ], + [ + "gene_synonym", + "GeneID:945961" + ], + [ + "gene_synonym", + "JW1490" + ], + [ + "gene_synonym", + "NP_416012.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31827" + ], + [ + "gene_synonym", + "b1495" + ], + [ + "gene_synonym", + "yddB" + ] + ], + "dna_sequence": "ATGAAGCGAGTTCTTATTCCTGGCGTCATTTTATGTGGCGCTGATGTGGCGCAGGCCGTCGATGACAAAAACATGTACATGCATTTTTTTGAAGAGATGACGGTCTATGCTCCTGTCCCTGTACCCGTAAACGGCAACACGCATTACACCAGTGAAAGCATCGAGCGTTTACCGACCGGGAATGGCAATATCAGCGATCTGCTGAGAACCAACCCTGCGGTACGCATGGATTCAACGCAAAGTACCTCGTTGAACCAGGGAGATATTCGCCCTGAGAAAATCTCTATTCACGGTGCGTCGCCCTACCAGAATGCCTATTTGATTGACGGTATTAGTGCAACTAATAACCTGAACCCAGCGAATGAGTCCGATGCCAGTAGTGCAACCAATATTAGCGGGATGTCACAGGGGTATTATCTTGATGTCAGCTTACTGGACAATGTGACGCTTTATGACAGTTTTGTGCCGGTTGAATTTGGTCGCTTCAATGGCGGGGTAATTGATGCAAAGATCAAACGCTTCAACGCTGATGATAGCAAGGTGAAATTGGGTTATCGCACTACGCGTTCGGACTGGTTAACATCGCATATCGATGAGAATAACAAGAGCGCATTTAATCAAGGCTCTTCAGGAAGTACTTATTACTCCCCAGATTTTAAAAAGAACTTTTATACCTTGTCGTTTAATCAGGAACTCGCTGATAACTTCGGCGTTACCGCCGGTTTATCGCGCCGCCAGTCTGATATCACCCGCGCGGATTATGTTTCGAATGACGGCATTGTCGCCGGTCGGGCACAGTATAAAAACGTTATCGATACTGCATTAAGCAAATTTACCTGGTTTGCCAGCGACCGCTTTACCCACGATTTAACCTTAAAATATACCGGCTCCAGCCGTGATTATAATACCAGCACCTTCCCGCAGTCTGATCGCGAAATGGGTAATAAATCCTATGGTCTGGCATGGGATATGGATACGCAGCTCGCATGGGCCAAACTGCGTACCACCGTTGGTTGGGATCATATTAGTGATTATACCCGTCACGATCATGACATCTGGTACACCGAACTTTCATGTACATATGGTGATATTACAGGGCGTTGCACCCGTGGCGGATTAGGACACATTTCCCAGGCTGTAGATAATTACACCTTCAAAACACGCCTGGACTGGCAAAAATTCGCCGTGGGTAATGTTTCGCATCAACCCTACTTCGGCGCGGAATACATCTATTCCGATGCGTGGACTGAACGCCATAACCAGTCTGAATCCTATGTGATTAATGCTGCCGGAAAGAAAACTAACCATACCATTTACCATAAAGGTAAAGGCCGCCTGGGAATTGACAACTACACGCTGTATATGGCGGATCGCATTAGCTGGCGTAATGTGTCATTAATGCCCGGCGTGCGGTATGACTATGACAACTATCTGTCAAACCACAATATCTCCCCGCGCTTTATGACGGAATGGGATATTTTTGCTAATCAAACCTCAATGATTACAGCAGGTTATAACCGTTACTATGGCGGGAATATTCTTGATATGGGATTACGTGATATCCGCAATAGCTGGACGGAATCGGTATCAGGTAATAAAACTCTGACGCGTTATCAGGATTTGAAAACGCCTTATAACGATGAACTGGCAATGGGATTGCAGCAGAAAATCGGTAAGAACGTTATTGCGCGTGCAAACTATGTTTACCGTGAAGCGCATGATCAAATCAGCAAAAGCAGTCGTACCGACAGCGCGACTAAAACCACCATTACTGAATATAACAACGATGGCAAAACCAAAACGCATTCGTTCAGCCTCAGTTTTGAACTGGCCGAACCCCTGCATATCCGCCAGGTAGATATTAACCCACAAATTGTCTTTAGCTATATCAAGAGCAAGGGCAACTTGTCGTTAAACAATGGTTATGAGGAGAGCAATACCGGTGATAACCAGGTGGTTTATAACGGTAATCTGGTCTCTTACGATAGCGTTCCAGTGGCAGATTTTAATAACCCATTAAAGATCTCCTTAAACATGGATTTCACGCATCAACCGAGCGGGTTAGTGTGGGCGAATACGCTGGCCTGGCAAGAAGCGCGTAAAGCTCGCATTATCCTTGGTAAGACAAATGCGCAATACATCAGCGAATATTCAGATTACAAGCAGTATGTTGACGAAAAACTGGATAGCAGCCTGACCTGGGACACCCGCTTGTCCTGGACGCCACAATTTCTGCAACAACAAAACCTGACGATCAGTGCCGATATTCTCAATGTACTGGATAGCAAAACCGCTGTTGATACAACGAACACCGGTGTGGCGACCTACGCCAGTGGCCGTACTTTCTGGCTTGATGTCAGCATGAAATTTTAA", + "dna_sequence_length": 2373, + "functions": [ + "putative TonB-dependent outer membrane receptor" + ], + "id": "CDS_1482", + "location": [ + [ + "NC_000913", + 1577619, + "-", + 2373 + ] + ], + "md5": "5823ad0e14b5f0c01ca0bec7a8b569b8", + "parent_gene": "", + "protein_md5": "23330dd331dafb332dcbcd0c9344a149", + "protein_translation": "MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVNGNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDNYTLYMADRISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF", + "protein_translation_length": 790, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004984" + ], + [ + "gene_synonym", + "ECK1490" + ], + [ + "gene_synonym", + "EcoGene:EG11742" + ], + [ + "gene_synonym", + "GI:16129455" + ], + [ + "gene_synonym", + "GeneID:945945" + ], + [ + "gene_synonym", + "JW5242" + ], + [ + "gene_synonym", + "NP_416013.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31826" + ], + [ + "gene_synonym", + "b1496" + ], + [ + "gene_synonym", + "yddA" + ] + ], + "dna_sequence": "ATGATAACCATTCCCATTACGCTTCGTATGTTGATAGCAAAGTATCTCTGTCTGTTGAAGCCCTTTTGGCTGCGTAAGAATAATAAAACTTCAGTGTTGTTAATCATTATTATCCTCGCCATGATCCTTGGCGTGGTTAAAATTCAGGTCTGGTTAAACGACTGGAATAATGATTTTTTCAATGCGCTAAGCCAGAAAGAAACCGATAAGCTTTGGCAGCTTGTCCTTTGGTTCCCTGCCCTGCTGGGGATCTTTGTATTAATATCCGTAAACAAAACATGGTTAATTAAACTACTGACTATTCGCTGGCGCGAATGGTTAACAGATTACTACCTTAATCGGTGGTTTGCAGATAAAAACTACTACTTCACGCAGATCTACGGCGAGCATAAAAATACAGATAACCCTGACCAACGTATCGCTGAAGACATTCTCTTACTGATCAGCAAAACGCTCAGTCTTTCATTTGGCTTCATCCAGTCACTTAGCATGCTGATCACCTTTACCGTTATTCTTTGGGAAAGCGCGGGTACGCTCTCATTCACTGTTGGTGGAACAGAATGGAATATCCAGGGGTATATGGTCTATACCGTCGTGCTCATTGTGATCGGTGGAACTTTATTTACCCATAAGGTGGGTAAACGTATTCGTCCGCTTAATGTGGAAAAACAACGTAGCGAAGCGACATTTCGAACAAATCTTGTGCAGCATAATAAGCAGGCAGAACTGATTGCGCTAAGCAATGCTGAGTCTCTACAACGCCAGGAGTTGAGCGACAATTTTCATACCATTAAAGAGAACTGGCATCGTTTAATGAATCGTCAGCGGTGGCTTGATTACTGGCAGAATATTTATTCGCGCTCGCTTAGCGTTCTTCCCTACTTTCTGTTATTGCCGCAGTTTATTAGCGGGCAGATCAATCTGGGCGGACTGATGAAATCGCGCCAGGCATTTATGCTGGTATCGAACAATTTAAGCTGGTTTATTTATAAATATGACGAACTTGCTGAACTGGCTGCGGTTATCGATCGCTTGTATGAGTTCCATCAACTCACTGAACAGCGCCCTACGAATAAGCCTAAAAATTGCCAACATGCGGTACAAGTGGCTGATGCGAGTATTCGTACGCCTGATAATAAGATCATATTAGAGAACCTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGCGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCCTGCTGACAGTTGGTATGTGTCACAAACACCGTTAATCAAAACCGGCTTACTGAAAGAGATTATTTGTAAAGCACTTCCCCTGCCCGTAGACGATAAATCGTTGAGCGAAGTACTGCATCAGGTTGGTCTTGGGAAATTGGCTGCGCGTATTCATGACCACGATCGCTGGGGAGATATTCTTTCCAGCGGCGAAAAACAACGTATCGCCCTGGCACGATTAATTTTACGACGTCCGAAATGGATATTTCTTGACGAAACTACCTCTCATCTTGAGGAACAAGAGGCTATCCGCTTACTGCGTTTAGTGCGTGAAAAACTACCCACAAGCGGCGTCATTATGGTTACACATCAACCCGGTGTCTGGAACCTGGCCGATGATATTTGTGACATTAGCGCGGTTTTATAA", + "dna_sequence_length": 1686, + "functions": [ + "putative multidrug ABC transporter permease/ATPase" + ], + "id": "CDS_1483", + "location": [ + [ + "NC_000913", + 1579342, + "-", + 1686 + ] + ], + "md5": "6b18d63554943e60bd36a9db4f66a80c", + "parent_gene": "", + "protein_md5": "7cffa8a99a1213b1df7377350cc0dcfa", + "protein_translation": "MITIPITLRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWESAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL", + "protein_translation_length": 561, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004986" + ], + [ + "gene_synonym", + "ECK1491" + ], + [ + "gene_synonym", + "EcoGene:EG13795" + ], + [ + "gene_synonym", + "GI:90111285" + ], + [ + "gene_synonym", + "GeneID:945981" + ], + [ + "gene_synonym", + "JW1492" + ], + [ + "gene_synonym", + "NP_416014.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76134" + ], + [ + "gene_synonym", + "b1497" + ], + [ + "gene_synonym", + "ydeM" + ] + ], + "dna_sequence": "ATGCACGTTACAGCCAAGCCCTCCAGTTTTCAATGTAATCTCAAATGTGATTACTGTTTTTACCTTGAAAAAGAGTCGCAGTTTACTCATGAAAAATGGATGGATGACAGCACTCTGAAAGAGTTCATCAAACAATATATCGCAGCGTCTGGCAATCAGGTCTATTTTACCTGGCAAGGCGGTGAACCCACTCTGGCTGGCCTGGATTTTTTCCGTAAAGTTATTCACTATCAACAACGCTATGCAGGCCAAAAACGTATTTTTAATGCATTACAAACGAATGGCATTTTATTGAATAATGAATGGTGTGCCTTTCTCAAAGAACATGAATTTCTGGTTGGTATCTCGATCGATGGCCCCCAGGAGTTACATGACCGTTACAGACGCAGTAATTCAGGTAACGGTACTTTTGCAAAAGTGATAGCAGCCATCGAGCGTCTGAAATCATATCAAGTAGAGTTTAATACGTTAACCGTCATTAATAACGTTAATGTCCATTACCCTCTTGAGGTTTATCATTTTTTAAAATCTATCGGCAGTAAACATATGCAATTTATCGAATTGCTAGAAACCGGGACGCCGAATATTGATTTCAGTGGTCATAGTGAGAACACATTCCGTATCATTGATTTTTCTGTGCCTCCCACGGCTTATGGCAAGTTTATGTCAACCATTTTTATGCAATGGGTTAAAAACGATGTGGGTGAAATTTTCATCCGTCAGTTTGAAAGCTTTGTCAGCCGTTTTTTGGGGAATGGGCATACCAGTTGTATTTTCCAGGAGTCCTGCAAGGATAATCTGGTTGTTGAAAGTAATGGAGACATTTACGAATGCGACCATTTTGTCTATCCACAGTACAAAATTGGAAACATTAATAAATCTGAACTCAAAACGATGAACAGTGTACAACTGACAGCGCAAAAAAAACGGATTCCAGCGAAATGTCAGCAATGTGCATATAAACCTATCTGCAATGGCGGTTGTCCTAAGCATCGTATTACTAAAGTAAACAATGAGACTGTTTCTTATTTTTGCGAAGGTTATAAAATCCTTTTTTCAACCATGGTACCTTATATGAACGCCATGGTAGAGTTAGCTAAGAACAGAGTACCGCTTTACCACATTATGGATGTTGCAAAACAAATGGAGAATAATTAA", + "dna_sequence_length": 1158, + "functions": [ + "putative YdeN-specific sulfatase-maturating enzyme" + ], + "id": "CDS_1484", + "location": [ + [ + "NC_000913", + 1580790, + "-", + 1158 + ] + ], + "md5": "cbcabafa6d70a2f5cd2e0bad56f080d8", + "parent_gene": "", + "protein_md5": "11d7a823980792f6044f71ff0973fa65", + "protein_translation": "MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVINNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRIPAKCQQCAYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004988" + ], + [ + "gene_synonym", + "ECK1492" + ], + [ + "gene_synonym", + "EcoGene:EG13796" + ], + [ + "gene_synonym", + "GI:90111286" + ], + [ + "gene_synonym", + "GeneID:945957" + ], + [ + "gene_synonym", + "JW5243" + ], + [ + "gene_synonym", + "NP_416015.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77318" + ], + [ + "gene_synonym", + "b1498" + ], + [ + "gene_synonym", + "ydeN" + ] + ], + "dna_sequence": "ATGAAGTCTGCATTAAAGAAAAGTGTCGTAAGTACCTCGATATCTTTGATACTGGCATCTGGTATGGCTGCATTTGCTGCTCATGCGGCAGATGATGTAAAGCTGAAAGCAACCAAAACAAACGTTGCTTTCTCAGACTTTACGCCGACAGAATACAGTACCAAAGGAAAGCCAAATATTATCGTACTGACCATGGATGATCTTGGTTATGGACAACTTCCTTTTGATAAGGGATCTTTTGACCCAAAAACAATGGAAAATCGTGAAGTTGTCGATACCTACAAAATAGGGATAGATAAAGCCATTGAAGCTGCACAAAAATCAACGCCGACGCTCCTTTCATTAATGGATGAAGGCGTACGTTTTACTAACGGCTATGTGGCACACGGTGTTTCCGGCCCCTCCCGCGCCGCAATAATGACCGGTCGAGCTCCCGCCCGCTTTGGTGTCTATTCCAATACCGATGCTCAGGATGGTATTCCGCTAACAGAAACTTTCTTGCCTGAATTATTCCAGAATCATGGTTATTACACTGCAGCAGTAGGTAAATGGCACTTGTCAAAAATCAGTAATGTGCCGGTACCGGAAGATAAACAAACGCGTGACTATCATGACAACTTCACCACATTTTCTGCGGAAGAATGGCAACCTCAAAACCGTGGCTTTGATTACTTTATGGGATTCCACGCTGCAGGAACGGCATATTACAACTCCCCTTCACTGTTCAAAAATCGTGAACGTGTCCCCGCAAAAGGTTATATCAGCGATCAGTTAACCGATGAGGCAATTGGCGTTGTTGATCGTGCCAAAACACTTGACCAGCCTTTTATGCTTTACCTGGCTTATAATGCTCCGCACCTGCCAAATGATAATCCTGCACCGGATCAATATCAGAAGCAATTTAATACCGGTAGTCAAACAGCAGATAACTACTACGCTTCCGTTTATTCTGTTGATCAGGGTGTAAAACGCATTCTCGAACAACTGAAGAAAAACGGACAGTATGACAATACAATTATTCTCTTTACCTCCGATAATGGTGCGGTTATCGATGGTCCTCTGCCGCTGAACGGGGCGCAAAAAGGCTATAAGAGTCAGACCTATCCTGGCGGTACTCACACCCCAATGTTTATGTGGTGGAAAGGAAAACTTCAACCCGGTAATTATGACAAGCTGATTTCCGCAATGGATTTCTACCCGACAGCTCTTGATGCAGCCGATATCAGCATTCCAAAAGACCTTAAGCTGGATGGCGTTTCCTTGCTGCCCTGGTTGCAAGATAAGAAACAAGGCGAGCCACATAAAAATCTGACCTGGATAACCTCTTATTCTCACTGGTTTGACGAGGAAAATATTCCATTCTGGGATAATTACCACAAATTTGTTCGCCATCAGTCAGACGATTACCCGCATAACCCCAACACTGAGGACTTAAGCCAATTCTCTTATACGGTGAGAAATAACGATTATTCGCTTGTCTATACAGTAGAAAACAATCAGTTAGGTCTCTACAAACTGACGGATCTACAGCAAAAAGATAACCTTGCCGCCGCCAATCCGCAGGTCGTTAAAGAGATGCAAGGCGTGGTAAGAGAGTTTATCGACAGCAGCCAGCCACCGCTTAGCGAGGTAAATCAGGAGAAGTTTAACAATATCAAGAAAGCACTAAGCGAAGCGAAATAA", + "dna_sequence_length": 1683, + "functions": [ + "putative Ser-type periplasmic non-aryl sulfatase" + ], + "id": "CDS_1485", + "location": [ + [ + "NC_000913", + 1582524, + "-", + 1683 + ] + ], + "md5": "3504d76122722bfc9755ff07e8131d2f", + "parent_gene": "", + "protein_md5": "c604398bf9746ecd834ebe5d93da79ac", + "protein_translation": "MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAFSDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK", + "protein_translation_length": 560, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004992" + ], + [ + "gene_synonym", + "ECK1493" + ], + [ + "gene_synonym", + "EcoGene:EG13797" + ], + [ + "gene_synonym", + "GI:16129458" + ], + [ + "gene_synonym", + "GeneID:945922" + ], + [ + "gene_synonym", + "JW1494" + ], + [ + "gene_synonym", + "NP_416016.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76135" + ], + [ + "gene_synonym", + "b1499" + ], + [ + "gene_synonym", + "ydeO" + ] + ], + "dna_sequence": "ATGTCGCTCGTTTGTTCTGTTATATTTATTCATCATGCCTTCAACGCTAACATTTTAGATAAAGATTACGCCTTCTCTGACGGCGAGATCCTGATGGTAGATAACGCTGTTCGTACGCATTTTGAACCTTATGAGCGGCATTTTAAAGAGATCGGATTTACTGAAAATACCATTAAAAAATATCTACAATGCACTAACATCCAGACAGTGACGGTGCCTGTTCCTGCGAAGTTTTTACGTGCTTCAAATGTACCGACTGGATTGCTTAATGAAATGATTGCTTATCTCAACTCGGAAGAACGCAATCATCATAATTTTTCAGAACTTTTGCTTTTTTCTTGCCTGTCTATTTTTGCCGCATGCAAAGGTTTCATTACACTATTAACTAACGGTGTGCTATCCGTTTCTGGGAAAGTGAGAAATATTGTCAACATGAAGCCGGCGCACCCATGGAAGCTGAAAGATATTTGTGACTGCCTGTACATCAGTGAAAGCCTGTTGAAGAAAAAACTTAAGCAAGAGCAAACGACATTCTCACAGATTCTTTTAGATGCAAGAATGCAGCACGCAAAAAATTTGATACGCGTAGAAGGTTCAGTCAATAAAATTGCCGAACAATGTGGTTATGCCAGTACATCTTATTTTATTTATGCGTTCCGCAAACATTTCGGCAACAGTCCGAAGAGAGTTTCTAAGGAGTACCGTTGTCAAAGTCACACGGGTATGAATACGGGCAACACGATGAATGCTTTAGCTATTTGA", + "dna_sequence_length": 762, + "functions": [ + "UV-inducible global regulator, EvgA-, GadE-dependent" + ], + "id": "CDS_1486", + "location": [ + [ + "NC_000913", + 1583687, + "-", + 762 + ] + ], + "md5": "2182223141f739424f3b05abf3ba537b", + "parent_gene": "", + "protein_md5": "708dfdb2806673304fce02223e94fba4", + "protein_translation": "MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNALAI", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4475" + ], + [ + "gene_synonym", + "EcoGene:EG14466" + ], + [ + "gene_synonym", + "GI:16129459" + ], + [ + "gene_synonym", + "GeneID:946061" + ], + [ + "gene_synonym", + "NP_416017.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76136" + ], + [ + "gene_synonym", + "b1500" + ], + [ + "gene_synonym", + "safA" + ], + [ + "gene_synonym", + "yneN" + ] + ], + "dna_sequence": "ATGCATGCGACCACAGTGAAAAACAAAATCACGCAAAGAGACAACTATAAAGAAATCATGTCTGCAATTGTGGTTGTCTTATTACTGACACTTACGTTGATAGCCATTTTTTCGGCAATTGATCAGCTGAGTATTTCAGAAATGGGTCGCATTGCAAGAGATCTTACACATTTCATTATCAATAGTTTGCAAGGCTGA", + "dna_sequence_length": 198, + "functions": [ + "two-component system connector membrane protein, EvgSA to PhoQP" + ], + "id": "CDS_1487", + "location": [ + [ + "NC_000913", + 1583959, + "-", + 198 + ] + ], + "md5": "aae0de6481bd5e1da8e545233d4f8425", + "parent_gene": "", + "protein_md5": "833a468d6a2f92708e4cf1789c8123d1", + "protein_translation": "MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005001" + ], + [ + "gene_synonym", + "ECK1494" + ], + [ + "gene_synonym", + "EcoGene:EG13798" + ], + [ + "gene_synonym", + "GI:16129460" + ], + [ + "gene_synonym", + "GeneID:946055" + ], + [ + "gene_synonym", + "JW1495" + ], + [ + "gene_synonym", + "NP_416018.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77561" + ], + [ + "gene_synonym", + "b1501" + ], + [ + "gene_synonym", + "ydeP" + ] + ], + "dna_sequence": "ATGAAGAAAAAAATTGAATCCTACCAGGGTGCTGCAGGTGGTTGGGGTGCTGTTAAATCCGTAGCGAATGCAGTACGTAAGCAGATGGATATACGCCAGGATGTTATTGCCATGTTTGACATGAATAAGCCAGAGGGCTTTGACTGTCCGGGTTGTGCATGGCCAGATCCTAAGCACAGTGCGTCATTCGACATTTGTGAAAACGGCGCAAAAGCAATCGCCTGGGAAGTCACGGATAAGCAGGTAAACGCCTCTTTCTTTGCTGAGAATACGGTTCAATCATTACTTACCTGGGGAGACCACGAGCTTGAGGCTGCGGGGCGACTCACTCAGCCTTTGAAATATGATGCCGTCAGCGACTGTTACAAGCCATTAAGCTGGCAACAAGCTTTCGACGAAATTGGCGCACGCCTTCAAAGCTATAGTGATCCCAATCAGGTTGAATTCTATACTTCGGGCCGCACTTCCAATGAAGCTGCCTTTCTTTATCAGCTTTTTGCCCGTGAATACGGGAGCAATAACTTTCCCGACTGCTCCAACATGTGCCATGAACCGACAAGCGTGGGTTTGGCAGCGAGTATCGGTGTAGGTAAAGGGACCGTGTTGCTGGAAGACTTTGAGAAGTGCGATTTAGTCATTTGCATTGGGCATAACCCTGGTACAAACCACCCTCGCATGCTGACTTCGTTGCGCGCTTTAGTGAAACGGGGAGCGAAAATGATCGCCATCAATCCTCTACAGGAACGTGGCCTGGAGCGATTTACCGCACCGCAAAACCCGTTTGAAATGCTGACGAACTCTGAGACTCAGTTGGCCAGTGCCTACTATAACGTGCGCATTGGTGGCGATATGGCGTTGCTCAAGGGGATGATGCGCCTGTTAATTGAGCGCGATGATGCTGCAAGCGCCGCAGGTCGGCCTTCATTGCTTGATGACGAGTTTATTCAAACGCATACCGTCGGCTTTGACGAGCTACGCCGTGACGTTCTCAATTCCGAGTGGAAAGATATCGAACGTATTTCTGGACTAAGTCAGACACAAATCGCCGAACTGGCTGACGCATATGCCGCTGCCGAACGCACCATTATCTGTTACGGAATGGGGATCACTCAGCACGAACATGGTACCCAGAACGTACAGCAACTGGTCAATCTGCTGTTGATGAAAGGTAACATTGGCAAGCCTGGTGCGGGTATCTGCCCACTACGTGGACACTCTAATGTACAGGGCGACCGAACCGTCGGTATCACCGAGAAACCGTCTGCAGAGTTTCTGGCTCGTCTGGGTGAGCGCTATGGCTTCACCCCACCTCATGCACCTGGACATGCTGCAATTGCCAGCATGCAAGCAATATGTACGGGGCAGGCTCGAGCATTGATCTGCATGGGGGGCAATTTTGCGCTGGCAATGCCAGATCGGGAAGCGAGCGCTGTACCGTTAACGCAATTAGATTTGGCGGTACACGTAGCCACTAAGCTTAACCGCTCTCATCTGTTGACCGCACGGCATAGCTATATTCTGCCGGTCCTGGGACGTAGCGAGATTGACATGCAAAAAAACGGTGCGCAGGCGGTAACCGTTGAGGATTCAATGTCGATGATTCATGCCTCGCGTGGCGTGTTAAAACCCGCCGGTGTAATGCTGAAATCAGAGTGTGCAGTGGTCGCGGGAATCGCGCAGGCAGCACTACCCCAGAGCGTGGTAGCCTGGGAGTATCTGGTGGAAGATTATGATCGCATTCGCAATGACATTGAAGCTGTGCTGCCAGAGTTCGCCGACTATAACCAGCGCATCCGTCATCCCGGTGGTTTTCACCTGATAAATGCAGCTGCTGAAAGGCGCTGGATGACGCCGTCAGGTAAGGCTAATTTCATTACCAGCAAAGGGCTGTTAGAAGATCCCTCTTCAGCGTTTAACAGTAAGCTGGTCATGGCGACAGTACGCAGCCACGATCAGTACAACACGACGATTTATGGTATGGATGATCGCTATCGAGGGGTATTCGGTCAACGAGATGTGGTCTTTATGAGTGCTAAACAAGCTAAAATTTGCCGTGTAAAAAACGGCGAAAGAGTTAATCTTATTGCGCTTACGCCAGACGGTAAGCGCAGCTCACGCCGCATGGATAGATTAAAAGTGGTCATTTACCCTATGGCTGACCGCTCACTGGTGACCTATTTTCCAGAATCGAATCACATGCTAACACTTGATAACCACGATCCATTAAGTGGCATTCCTGGCTATAAAAGTATTCCGGTTGAATTAGAACCATCAAATTAA", + "dna_sequence_length": 2280, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1488", + "location": [ + [ + "NC_000913", + 1586486, + "-", + 2280 + ] + ], + "md5": "c221964d655b46d22cb39eae9f925681", + "parent_gene": "", + "protein_md5": "0405fba7df86754531c2dff35022b827", + "protein_translation": "MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKNGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN", + "protein_translation_length": 759, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005006" + ], + [ + "gene_synonym", + "ECK1495" + ], + [ + "gene_synonym", + "EcoGene:EG13799" + ], + [ + "gene_synonym", + "GI:16129461" + ], + [ + "gene_synonym", + "GeneID:946050" + ], + [ + "gene_synonym", + "JW1496" + ], + [ + "gene_synonym", + "NP_416019.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77588" + ], + [ + "gene_synonym", + "b1502" + ], + [ + "gene_synonym", + "fmlD" + ], + [ + "gene_synonym", + "ydeQ" + ] + ], + "dna_sequence": "ATGGGTAAAACAATCAGTATAAAGGTCCTGTTCGGTATTTATCTTCTATTAATGGCAGGCAAAGTTTTTGCCTTCAGTTGTAATGTCGATGGCGGGTCAAGTATTGGAGCAGGTACAACCTCTGTTTATGTTAATCTCGACCCTGTAATACAGCCGGGCCAGAATCTGGTTGTAGACTTGTCTCAGCATATAAGTTGCTGGAATGATTACGGCGGCTGGTACGACACTGATCATATAAACCTGGTACAAGGCTCAGCTTTCGCAGGCTCCCTACAGTCATATAAAGGATCGCTGTACTGGAATAATGTGACCTACCCCTTCCCGTTGACGACAAATACCAACGTATTGGATATTGGTGATAAGACACCGATGCCATTACCGTTAAAACTCTATATTACCCCAGTTGGGGCGGCCGGTGGAGTTGTCATAAAAGCGGGGGAAGTCATTGCCCGTATTCATATGTATAAAATTGCAACATTAGGAAGCGGAAATCCGCGTAATTTTACGTGGAATATTATTTCAAATAACAATGTTGTTATGCCAACAGGCGGCTGCACCGTTGATAGTCGAAATGTCACCGTGGATCTCCCGGACTTTCCTGGAAGCGCAGAAATACCCCTTGGCGTATATTGCTCAAGCGAACAAAAGCTCTCATTTTATCTTTCGGGTGCCACCACTGACAGTAGCCGACAAGTGTTTGCTAACACAGCACCTGATGCAACAAAAGCATCGGGAGTGGGTGTCACTCTAATGCGTAATGGAAAAATACTGGCTACGGGAGAAAATGTCTCCCTGGGGACAGTAAATAAAAGCAAAGTACCTCTGGGTTTAAGCGCAACCTATGGACAAACAGGAAACAAGGTTTCAGCCGGAACCGTCCAGTCAGTCATTGGTGTCACTTTTATCTATGAATAA", + "dna_sequence_length": 915, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_1489", + "location": [ + [ + "NC_000913", + 1587734, + "-", + 915 + ] + ], + "md5": "92a230a40057230e2062c12cc5f0d988", + "parent_gene": "", + "protein_md5": "0a50178ff3d18640e45a8353e3223d29", + "protein_translation": "MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005008" + ], + [ + "gene_synonym", + "ECK1496" + ], + [ + "gene_synonym", + "EcoGene:EG13800" + ], + [ + "gene_synonym", + "GI:16129462" + ], + [ + "gene_synonym", + "GeneID:946049" + ], + [ + "gene_synonym", + "JW1497" + ], + [ + "gene_synonym", + "NP_416020.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77294" + ], + [ + "gene_synonym", + "b1503" + ], + [ + "gene_synonym", + "ydeR" + ] + ], + "dna_sequence": "ATGAAAAGACTTCACAAGAGGTTCCTGTTAGCTACGTTTTGCGCGTTATTCACAGCAACTCTCCAGGCCGCCGATGTCACTATCACTGTTAATGGTCGGGTAGTCGCTAAACCCTGCACTATTCAAACCAAAGAAGCTAACGTTAATCTCGGGGATCTTTATACGCGCAATCTGCAACAACCTGGTTCTGCATCTGGCTGGCACAATATTACTTTGTCATTAACCGATTGTCCGGTTGAAACAAGTGCAGTGACGGCAATCGTGACAGGTTCAACTGACAATACGGGTTATTACAAAAATGAAGGTACTGCCGAAAATATTCAGATAGAGCTGAGGGATGACCAGGATGCTGCGTTAAAAAATGGCGATAGCAAAACGGTTATTGTTGATGAGATCACTCGTAATGCACAGTTTCCACTTAAGGCAAGAGCTATCACGGTGAATGGAAACGCAAGCCAGGGAACGATCGAGGCGCTAATCAATGTGATCTACACCTGGCAATAA", + "dna_sequence_length": 504, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_1490", + "location": [ + [ + "NC_000913", + 1588296, + "-", + 504 + ] + ], + "md5": "64ae273c946b63a4c5795049ecf41ee6", + "parent_gene": "", + "protein_md5": "489cef56c8a109bae25ce4fa8c5480b5", + "protein_translation": "MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTKEANVNLGDLYTRNLQQPGSASGWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDAALKNGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005013" + ], + [ + "gene_synonym", + "ECK1497" + ], + [ + "gene_synonym", + "EcoGene:EG13801" + ], + [ + "gene_synonym", + "GI:16129463" + ], + [ + "gene_synonym", + "GeneID:946047" + ], + [ + "gene_synonym", + "JW1498" + ], + [ + "gene_synonym", + "NP_416021.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77789" + ], + [ + "gene_synonym", + "b1504" + ], + [ + "gene_synonym", + "ydeS" + ] + ], + "dna_sequence": "ATGAAATACAATAACATTATTTTCCTCGGTTTATGTCTGGGGTTAACCACCTATTCTGCTTTATCCGCAGATAGCGTTATTAAAATTAGCGGGCGCGTCCTCGATTATGGCTGCACAGTCTCATCGGATTCGCTTAATTTTACCGTAGATCTCCAAAAAAACAGTGCCAGACAATTTCCAACGACCGGTAGCACAAGTCCAGCCGTCCCTTTTCAGATTACGTTAAGTGAATGCAGCAAAGGGACAACGGGGGTTCGGGTTGCATTTAACGGTATTGAGGATGCAGAAAATAATACTTTGTTGAAACTGGATGAAGGAAGCAATACGGCCTCCGGTTTGGGTATAGAAATATTGGACGCAAATATGCGTCCGGTGAAACTGAATGATCTTCATGCCGGGATGCAGTGGATCCCACTGGTACCAGAACAGAACAATATTTTGCCTTACTCCGCTCGTCTGAAGTCAACTCAGAAGTCCGTCAATCCGGGACTGGTGAGGGCTTCGGCAACCTTTACCCTTGAATTTCAATAA", + "dna_sequence_length": 531, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_1491", + "location": [ + [ + "NC_000913", + 1588839, + "-", + 531 + ] + ], + "md5": "73b0baf90e9dd8dd9cd344c2d88eadf5", + "parent_gene": "", + "protein_md5": "9e1ed699f27e4c1b95bbfc96c69d56de", + "protein_translation": "MKYNNIIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDSLNFTVDLQKNSARQFPTTGSTSPAVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLKLDEGSNTASGLGIEILDANMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSVNPGLVRASATFTLEFQ", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005017" + ], + [ + "gene_synonym", + "ECK1498" + ], + [ + "gene_synonym", + "EcoGene:EG13802" + ], + [ + "gene_synonym", + "GeneID:946042" + ], + [ + "gene_synonym", + "JW1499" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76137" + ], + [ + "gene_synonym", + "b1505" + ], + [ + "gene_synonym", + "fmlC" + ], + [ + "gene_synonym", + "ydeT" + ] + ], + "dna_sequence": "GGAACCAATATCCAGGTCGCAGGATATCGCTATTCTACGCAAGGTTTTTATAACTTATCCGACAGTGCCTACAGTCGAATGAGTGGTTACACCGTCAAGCCTCCTACCGGAGACACCAATGAGCAGACACAATTTATTGATTATTTTAATCTGTTCTACAGTAAGCGTGGTCAGGAACAAATAAGCATCTCTCAGCAGCTTGGAAATTACGGTACGACATTTTTCAGTGCCAGTCGCCAAAGTTACTGGAACACGTCACGCAGCGACCAGCAAATATCATTTGGATTAAATGTGCCGTTTGGTGATATTACGACTTCGCTGAATTACAGCTATTCCAATAATATATGGCAAAACGATCGGGATCATTTACTCGCTTTTACGCTTAATGTTCCCTTCAGTCATTGGATGCGTACAGACAGTCAGTCGGCATTTCGTAATTCAAACGCCAGTTACAGTATGTCAAACGATTTGAAAGGCGGCATGACCAATCTATCGGGGGTTTATGGCACTCTGCTGCCGGATAATAACCTGAATTATAGCGTTCAGGTCGGTAACACCCACGGAGGTAATACATCGTCTGGCACCAGTGGTTACAGTTCTCTTAATTATCGTGGAGCTTATGGTAATACTAATGTCGGTTACAGTCGGAGTGGTGACAGCAGCCAGATTTATTACGGAATGAGTGGTGGGATTATTGCTCATGCTGATGGCATCACCTTTGGACAGCCGCTGGGCGACACAATGGTTCTGGTTAAGGCTCCTGGTGCTGATAATGTCAAAATAGAGAACCAGACCGGAATTCATACCGACTGGCGTGGCTATGCCATATTACCATTTGCGACAGAATATAGAGAAAACCGTGTTGCTCTTAACGCGAATTCCCTTGCAGATAATGTTGAACTGGATGAAACCGTGGTCACTGTCATCCCAACTCACGGTGCTATTGCCAGAGCAACATTTAATGCACAAATCGGCGGGAAAGTATTAATGACGTTGAAGTACGGTAATAAGAGCGTTCCATTCGGTGCAATTGTCACACACGGAGAGAATAAAAATGGCAGCATTGTCGCGGAAAATGGTCAGGTTTATCTGACTGGACTTCCACAGTCAGGGCAATTACAGGTTTCATGGGGCAAAGATAAAAACTCAAACTGTATTGTCGAGTACAAGCTTCCTGAAGTTTCTCCTGGTACCTTACTGAACCAGCAGACAGCAATCTGTCGCTAA", + "dna_sequence_length": 1227, + "id": "CDS_1492", + "location": [ + [ + "NC_000913", + 1590079, + "-", + 1227 + ] + ], + "md5": "f85004971aa534f8830c472c39c185fa", + "parent_gene": "", + "protein_md5": "efd6b91016eacbcd73432d35bb54de45", + "protein_translation": "GTNIQVAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTNEQTQFIDYFNLFYSKRGQEQISISQQLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLAFTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGNTHGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLGDTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGQLQVSWGKDKNSNCIVEYKLPEVSPGTLLNQQTAICR", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005019" + ], + [ + "gene_synonym", + "ECK1499" + ], + [ + "gene_synonym", + "EcoGene:EG14360" + ], + [ + "gene_synonym", + "GeneID:946063" + ], + [ + "gene_synonym", + "JW5244" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76138" + ], + [ + "gene_synonym", + "b1506" + ], + [ + "gene_synonym", + "yneL" + ] + ], + "dna_sequence": "ATGAGTCCACTCCGGTATCAGAAATGGCTACGTCTCAATGAAGTCAGGCGACAGATGCTGAATGAACATTACGATGTCACCACAGCAGCCTATGCTGTCGGTTACGAAAGCCTATCCCATTTCAGTCGGGAATATTCGCGGATGTTTGGAGAGTCACCCAAGAGAGATATTACCAGGTTAAGAAAGTCTGTCGGACAGCTTTAA", + "dna_sequence_length": 204, + "id": "CDS_1493", + "location": [ + [ + "NC_000913", + 1590536, + "-", + 111 + ], + [ + "NC_000913", + 1590426, + "-", + 93 + ] + ], + "md5": "17d6e816700918ad5d00d3bb8b9f8fc9", + "parent_gene": "", + "protein_md5": "88bd3a1da904cd367bc632b237be08dd", + "protein_translation": "MSPLRYQKWLRLNEVRRQMLNEHYDVTTAAYAVGYESLSHFSREYSRMFGESPKRDITRLRKSVGQL", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005022" + ], + [ + "gene_synonym", + "ECK1500" + ], + [ + "gene_synonym", + "EcoGene:EG10443" + ], + [ + "gene_synonym", + "GI:16129466" + ], + [ + "gene_synonym", + "GeneID:946064" + ], + [ + "gene_synonym", + "JW1500" + ], + [ + "gene_synonym", + "NP_416024.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23874" + ], + [ + "gene_synonym", + "b1507" + ], + [ + "gene_synonym", + "hipA" + ] + ], + "dna_sequence": "ATGCCTAAACTTGTCACTTGGATGAACAACCAGCGGGTAGGCGAGTTAACGAAGTTAGCCAACGGCGCGCACACCTTTAAGTATGCACCGGAGTGGTTAGCAAGCCGTTATGCCAGACCGTTGTCACTTTCGCTGCCATTGCAGAGGGGGAATATCACCTCTGATGCCGTATTTAACTTCTTCGATAACCTGTTACCCGATAGCCCGATTGTACGTGACCGGATCGTTAAACGTTATCATGCCAAATCCAGACAACCGTTTGATTTATTGTCAGAAATAGGGCGAGACAGCGTTGGTGCCGTGACGTTAATACCCGAAGACGAAACCGTAACGCATCCGATAATGGCATGGGAAAAGCTTACTGAAGCCAGACTTGAAGAAGTATTAACGGCTTATAAAGCAGATATCCCGCTAGGCATGATTAGAGAAGAAAATGACTTTCGCATCTCGGTTGCTGGCGCACAGGAGAAGACAGCACTGCTCAGAATAGGCAATGACTGGTGCATTCCGAAAGGAATAACGCCGACGACGCACATCATTAAATTACCGATTGGCGAAATCAGGCAGCCCAATGCGACGCTCGATCTCAGCCAAAGCGTTGATAATGAGTATTACTGTCTGCTGCTGGCGAAAGAACTTGGGTTGAATGTTCCGGACGCAGAAATCATTAAAGCGGGAAATGTGCGCGCGTTAGCGGTCGAACGTTTTGACAGGCGTTGGAATGCTGAGCGAACGGTTTTACTTCGCTTGCCACAGGAGGATATGTGTCAGACATTCGGTTTACCTTCATCGGTGAAATATGAATCAGATGGAGGCCCAGGCATCGCGCGGATCATGGCTTTTTTGATGGGGTCCAGCGAGGCGCTGAAAGATCGCTATGATTTTATGAAATTCCAGGTCTTCCAGTGGTTGATTGGCGCAACGGACGGTCATGCAAAAAACTTCTCCGTATTTATTCAGGCTGGCGGCAGTTATCGACTCACGCCATTTTACGACATCATTTCAGCATTTCCGGTCCTTGGCGGTACGGGAATACACATCAGCGATCTCAAACTGGCAATGGGGCTTAACGCATCCAAAGGCAAAAAAACGGCAATCGATAAAATTTATCCGCGACATTTTTTGGCGACAGCAAAGGTGCTGAGATTCCCGGAAGTGCAGATGCATGAAATCCTGAGTGACTTTGCCAGAATGATTCCAGCAGCACTGGATAACGTGAAGACTTCATTACCGACAGATTTTCCGGAGAACGTGGTGACGGCAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGA", + "dna_sequence_length": 1323, + "functions": [ + "inactivating GltX kinase facilitating persister formation", + "toxin of HipAB TA pair", + "autokinase" + ], + "id": "CDS_1494", + "location": [ + [ + "NC_000913", + 1592176, + "-", + 1323 + ] + ], + "md5": "22eecb93c56caaf7506a2ba9fe316273", + "parent_gene": "", + "protein_md5": "76f9d05369187dd2096670e3fcb0656a", + "protein_translation": "MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLSLPLQRGNITSDAVFNFFDNLLPDSPIVRDRIVKRYHAKSRQPFDLLSEIGRDSVGAVTLIPEDETVTHPIMAWEKLTEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCIPKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGSSEALKDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTSLPTDFPENVVTAVESNVLRLHGRLSREYGSK", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005024" + ], + [ + "gene_synonym", + "ECK1501" + ], + [ + "gene_synonym", + "EcoGene:EG10442" + ], + [ + "gene_synonym", + "GI:16129467" + ], + [ + "gene_synonym", + "GeneID:946065" + ], + [ + "gene_synonym", + "JW1501" + ], + [ + "gene_synonym", + "NP_416025.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23873" + ], + [ + "gene_synonym", + "b1508" + ], + [ + "gene_synonym", + "hipB" + ] + ], + "dna_sequence": "ATGATGAGCTTTCAGAAGATCTATAGCCCAACGCAATTGGCGAATGCAATGAAACTGGTTCGCCAGCAAAATGGCTGGACGCAGAGCGAGCTGGCGAAAAAAATTGGTATTAAGCAGGCGACGATTTCCAATTTCGAAAACAACCCTGACAATACCACGCTCACGACATTTTTTAAGATTTTACAGTCGCTTGAACTCTCAATGACGCTATGCGACGCGAAAAATGCCTCGCCAGAATCAACAGAACAGCAAAATCTGGAGTGGTAA", + "dna_sequence_length": 267, + "functions": [ + "antitoxin of HipAB toxin-antitoxin system" + ], + "id": "CDS_1495", + "location": [ + [ + "NC_000913", + 1592442, + "-", + 267 + ] + ], + "md5": "930f0e4da8173919161322ef9f55844a", + "parent_gene": "", + "protein_md5": "18d1c634bc57f7386f29c1a0c602bee7", + "protein_translation": "MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005037" + ], + [ + "gene_synonym", + "ECK1503" + ], + [ + "gene_synonym", + "EcoGene:EG11780" + ], + [ + "gene_synonym", + "GeneID:7751623" + ], + [ + "gene_synonym", + "JW1503" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32051" + ], + [ + "gene_synonym", + "b4696" + ], + [ + "gene_synonym", + "orfT" + ], + [ + "gene_synonym", + "ydeK" + ], + [ + "gene_synonym", + "ydeU" + ], + [ + "gene_synonym", + "yneO" + ] + ], + "dna_sequence": "TTGCGTAAATCCTCTGGACTGACAACGAAATTCAGTAGATTGACGCTGGGTGTTTTGCTGGCACTAAGCGGTTCAGCGTCTGGTGCAAGTCTGGAAGTTGATAATGATCAGATTACCAATATTGATACTGATGTTGCTTATGATGCCTACCTGGTTGGCTGGTATGGCACTGGAGTGCTTAATATTTTGGCTGGCGGTAATGCCTCCTTAACCACTATTACTACCAGCGTCATTGGCGCTAATGAGGACTCAGAGGGCACCGTTAATGTTTTGGGTGGCACCTGGCGATTGTATGATAGCGGAAATAATGCAAGGCCTTTAAATGTGGGTCAATCCGGAACGGGGACGCTGAATATTAAACAGAAGGGTCACGTCGATGGAGGCTATTTAAGATTAGGTTCTTCGACAGGAGGCGTCGGGACGGTCAATGTTGAGGGAGAGGACTCTGTTCTGACGACCGAATTATTCGAAATAGGTAGCTATGGCACAGGTTCATTAAATATTACGGATAAGGGTTACGTCACGAGTTCAATCGTCGCCATTTTAGGCTATCAGGCGGGCAGTAATGGCCAGGTTGTCGTTGAAAAGGGTGGCGAGTGGCTAATAAAAAATAATGATTCCTCAATTGAATTTCAAATTGGTAATCAAGGAACTGGGGAGGCGACTATTCGCGAGGGGGGGTTGGTTACGGCTGAAAATACGATTATCGGTGGCAATGCCACCGGTATCGGAACCCTGAATGTGCAGGATCAAGACTCTGTCATCACGGTACGCAGACTCTATAATGGATATTTCGGTAATGGCACAGTCAATATTTCCAATAATGGACTGATTAATAACAAAGAATATTCATTGGTGGGCGTTCAGGACGGTTCCCACGGTGTCGTCAACGTGACCGATAAAGGGCATTGGAATTTCCTCGGAACGGGCGAAGCTTTCCGCTATATCTATATCGGTGATGCTGGCGACGGTGAACTTAATGTCTCGAGTGAAGGCAAAGTAGATTCGGGAATTATCACTGCGGGGATGAAAGAAACAGGCACAGGCAACATTACTGTTAAGGATAAGAACTCCGTTATCACTAATCTCGGAACTAATCTTGGTTATGACGGCCACGGCGAAATGAATATCAGTAATCAGGGGCTTGTTGTCAGCAACGGAGGAAGTTCACTCGGTTATGGAGAAACCGGCGTCGGGAATGTCAGCATCACCACGGGGGGAATGTGGGAGGTCAATAAGAATGTCTATACCACCATTGGTGTTGCGGGCGTCGGAAACCTCAATATTAGCGATGGCGGTAAGTTCGTATCGCAAAATATTACTTTTTTGGGCGATAAAGCAAGCGGTATCGGCACACTGAACCTGATGGATGCGACATCATCGTTCGATACTGTGGGTATCAATGTCGGTAATTTTGGTAGCGGTATCGTAAATGTCAGTAATGGTGCCACCCTTAATTCAACGGGCTATGGATTTATCGGAGGAAATGCCTCCGGTAAGGGGATAGTTAATATTTCAACGGACAGTCTCTGGAATTTAAAGACATCATCTACTAACGCACAATTGCTACAGGTCGGTGTATTAGGCACGGGTGAACTGAATATTACCACCGGAGGTATAGTTAAAGCGCGTGATACACAGATAGCTCTCAATGACAAAAGTAAGGGCGACGTGAGGGTGGATGGGCAGAACTCTCTTCTTGAAACATTCAATATGTACGTAGGGACATCTGGTACGGGTACGTTAACCCTGACGAATAACGGTACGCTGAATGTCGAAGGTGGAGAAGTTTACTTAGGTGTTTTTGAGCCTGCTGTAGGAACGCTAAACATTGGTGCTGCTCACGGTGAGGCGGCGGCAGATGCCGGATTTATCACCAATGCGACGAAAGTGGAGTTTGGTCTTGGCGAAGGCGTTTTTGTCTTTAATCATACCAATAACAGTGATGCCGGCTACCAGGTCGATATGCTGATTACAGGTGACGATAAAGACGGAAAAGTGATCCATGATGCAGGCCATACGGTGTTCAATGCAGGGAATACTTATAGCGGTAAAACGCTGGTCAATGACGGCCTCCTGACCATTGCGTCTCATACGGCAGATGGGGTAACGGGCATGGGGTCGAGTGAAGTAACCATTGCAAACCCCGGTACGCTCGACATTCTCGCATCAACGAACAGTGCAGGAGATTACACGCTGACCAATGCGCTCAAAGGCGATGGCTTGATGCGAGTGCAGCTGTCATCCTCCGACAAGATGTTTGGCTTTACCCATGCAACAGGGACTGAATTCGCCGGTGTTGCCCAACTGAAAGACAGTACCTTCACTCTGGAACGCGACAACACCGCTGCGCTTACTCACGCGATGTTGCAGTCTGACAGTGAAAATACCACATCGGTAAAAGTTGGAGAGCAATCCATTGGTGGACTGGCCATGAATGGAGGTACCATCATTTTCGATACGGATATTCCTGCTGCGACGCTCGCGGAGGGATATATCAGCGTCGATACGCTGGTTGTCGGCGCGGGTGACTACACCTGGAAAGGCCGTAACTATCAGGTAAACGGGACGGGCGACGTGCTTATCGACGTGCCTAAACCGTGGAATGATCCCATGGCGAATAACCCTCTGACGACGCTCAATTTGCTGGAACACGACGATAGCCATGTCGGCGTTCAACTGGTGAAGGCGCAAACGGTTATTGGGTCGGGTGGCTCATTAACGTTACGTGATTTACAGGGCGACGAGGTGGAAGCGGACAAAACGTTACACATTGCGCAAAACGGAACGGTGGTCGCCGAGGGTGATTATGGATTCCGCCTCACGACCGCACCAGGTAATGGTTTGTACGTTAACTATGGGCTGAAAGCGCTGAACATCCATGGTGGGCAAAAGCTGACGTTAGCCGAACATGGCGGAGCCTATGGCGCAACGGCCGATATGTCGGCAAAAATCGGTGGTGAAGGGGATCTGGCAATCAATACGGTGCGACAGGTTTCGCTTTCCAACGGTCAGAACGACTATCAGGGGGCAACCTACGTTCAGATGGGGACATTACGTACCGATGCGGATGGTGCACTTGGCAACACCCGGGAACTGAACATCAGCAACGCGGCCATCGTCGATCTTAATGGATCGACGCAGACGGTAGAGACATTCACCGGGCAGATGGGTTCGACTGTTTTGTTCAAAGAGGGGGCGCTGACGGTAAATAAAGGTGGGATCAGTCAGGGTGAACTGACAGGTGGCGGAAACCTGAATGTTACAGGGGGAACGCTGGCTATCGAGGGGCTTAATGCACGCTACAATGCGTTAACCAGCATTAGCCCAAATGCGGAAGTCAGCCTCGATAATACTCAGGGGTTAGGCAGAGGAAATATTGCCAATGACGGTCTGTTAACGCTAAAAAACGTGACTGGCGAACTGCGTAATAGCATAAGCGGGAAGGGTATCGTGAGCGCAACCGCCAGGACAGATGTAGAGTTGGATGGCGATAATAGCCGCTTTGTGGGGCAATTCAACATTGATACAGGCAGCGCGCTCAGCGTCAACGAGCAGAAAAACCTGGGTGATGCTTCCGTTATCAATAATGGCCTGCTCACCATCTCCACTGAGCGTAGCTGGGCGATGACGCACAGTATCAGCGGTAGCGGTGATGTGACAAAACTGGGTACCGGGATCCTGACTCTTAACAACGATTCCGCGGCGTATCAGGGTACGACGGATATCGTGGGGGGGGAAATTGCTTTCGGTTCCGACTCTGCCATTAATATGGCAAGTCAACACATTAATATCCATAACAGCGGTGTGATGTCGGGAAATGTCACCACTGCAGGTGATATGAACGTTATGCCTGGGGGGGCACTGCGTGTCGCTAAAACCACTATCGGCGGCAACCTGGAGAATGGCGGCACGGTTCAAATGAATAGCGAAGGGGGGAAACCGGGGAATGTACTGACCGTTAACGGCAACTATACCGGAAACAATGGCCTGATGACGTTCAACGCGACGCTGGGCGGCGATAATTCGCCCACCGATAAGATGAACGTGAAAGGCGATACCCAAGGGAACACTCGCGTTCGGGTTGATAACATTGGCGGCGTCGGTGCACAAACGGTCAACGGTATTGAACTCATTGAGGTTGGCGGTAATTCTGCAGGTAACTTCGCGCTGACCACCGGAACTGTCGAAGCTGGGGCTTACGTCTACACGCTGGCTAAAGGGAAGGGGAATGACGAGAAAAACTGGTATCTGACCAGTAAATGGGACGGCGTAACGCCAGCGGATACACCCGATCCCATCAATAATCCCCCTGTTGTGGATCCGGAAGGCCCATCAGTTTATCGCCCGGAGGCCGGAAGCTATATCAGCAACATTGCCGCAGCCAACTCGCTGTTTAGCCATCGTTTACACGACCGTCTGGGTGAGCCGCAGTATACAGATTCACTGCATTCTCAGGGGTCGGCAAGCAGTATGTGGATGCGTCATGTCGGAGGGCACGAACGTTCAAGGGCCGGTGACGGTCAGCTAAATACTCAGGCTAACCGCTATGTATTGCAGCTAGGCGGCGATTTGGCGCAGTGGAGTAGCAACGCGCAGGATCGCTGGCATCTTGGCGTGATGGCAGGCTACGCCAATCAGCACAGTAATACTCAGAGTAATCGTGTGGGTTATAAATCGGATGGGCGCATCAGCGGTTACAGCGCTGGGCTGTACGCGACCTGGTATCAGAACGATGCGAATAAGACCGGCGCTTATGTTGACAGCTGGGCGCTGTATAACTGGTTTGATAACAGCGTCAGTTCCGATAACCGTTCTGCTGACGACTATGATTCTCGCGGTGTGACGGCCTCTGTTGAGGGTGGGTATACCTTTGAAGCGGGAACATTTAGCGGCAGCGAAGGGACGCTGAATACCTGGTACGTCCAGCCACAGGCGCAAATCACCTGGATGGGTGTGAAAGATTCCGACCATACCCGGAAAGACGGAACGCGCATTGAAACGGAAGGCGACGGAAATGTGCAAACGCGACTTGGGGTGAAAACCTACCTGAACAGCCATCACCAGCGTGACGATGGTAAACAGCGTGAGTTCCAGCCTTACATTGAAGCGAACTGGATCAACAATAGCAAAGTCTACGCCGTGAAGATGAATGGTCAAACCGTAGGCCGTGAAGGTGCGCGTAATCTCGGTGAAGTACGTACCGGGGTTGAGGCGAAAGTAAATAACAACCTTAGCCTGTGGGGGAATGTCGGTGTGCAACTAGGTGATAAAGGCTATAGCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAA", + "dna_sequence_length": 5322, + "id": "CDS_1496", + "location": [ + [ + "NC_000913", + 1597987, + "-", + 3861 + ], + [ + "NC_000913", + 1594125, + "-", + 1461 + ] + ], + "md5": "092c8089a862973109031f798df53d44", + "parent_gene": "", + "protein_md5": "e89795a02bd127f9e690064aff4a456c", + "protein_translation": "LRKSSGLTTKFSRLTLGVLLALSGSASGASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNASLTTITTSVIGANEDSEGTVNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDGGYLRLGSSTGGVGTVNVEGEDSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQAGSNGQVVVEKGGEWLIKNNDSSIEFQIGNQGTGEATIREGGLVTAENTIIGGNATGIGTLNVQDQDSVITVRRLYNGYFGNGTVNISNNGLINNKEYSLVGVQDGSHGVVNVTDKGHWNFLGTGEAFRYIYIGDAGDGELNVSSEGKVDSGIITAGMKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNQGLVVSNGGSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKASGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNISTDSLWNLKTSSTNAQLLQVGVLGTGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTNNGTLNVEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGFITNATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTEFAGVAQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGTIIFDTDIPAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKPWNDPMANNPLTTLNLLEHDDSHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGNGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGGEGDLAINTVRQVSLSNGQNDYQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTSISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNSRFVGQFNIDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNNDSAAYQGTTDIVGGEIAFGSDSAINMASQHINIHNSGVMSGNVTTAGDMNVMPGGALRVAKTTIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW", + "protein_translation_length": 1773, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005041" + ], + [ + "gene_synonym", + "ECK1504" + ], + [ + "gene_synonym", + "EcoGene:EG13804" + ], + [ + "gene_synonym", + "GI:49176118" + ], + [ + "gene_synonym", + "GeneID:946069" + ], + [ + "gene_synonym", + "JW1504" + ], + [ + "gene_synonym", + "NP_416028.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77432" + ], + [ + "gene_synonym", + "b1511" + ], + [ + "gene_synonym", + "lsrK" + ], + [ + "gene_synonym", + "ydeV" + ] + ], + "dna_sequence": "ATGGCTCGACTCTTTACCCTTTCAGAATCAAAGTACTACCTGATGGCGCTGGATGCAGGCACCGGAAGTATTCGGGCTGTGATATTCGACCTGGAAGGCAATCAAATAGCAGTGGGACAGGCGGAGTGGCGGCATCTGGCAGTACCGGACGTTCCTGGTTCTATGGAATTTGATCTCAACAAAAACTGGCAACTGGCGTGTGAGTGTATGCGCCAGGCGCTGCACAACGCCGGCATAGCCCCGGAGTATATCGCTGCCGTTTCGGCATGTTCGATGCGTGAAGGCATTGTTTTATATAATAATGAAGGAGCCCCGATCTGGGCCTGCGCCAATGTGGATGCCAGAGCGGCACGCGAAGTTAGCGAACTTAAAGAACTGCACAACAATACCTTTGAAAACGAAGTTTATCGCGCGACCGGACAAACACTGGCTTTAAGTGCCATCCCCAGATTACTTTGGCTGGCGCACCATCGTTCCGATATTTACCGTCAGGCATCAACCATCACCATGATCAGCGACTGGCTGGCCTATATGCTCAGCGGCGAACTGGCGGTGGATCCCTCTAACGCTGGCACCACGGGACTTCTTGATCTAACCACCCGTGACTGGAAACCTGCATTGCTGGATATGGCTGGCCTACGTGCCGATATTCTTTCTCCTGTCAAAGAAACCGGCACATTGCTGGGCGTGGTAAGTTCACAAGCGGCGGAACTCTGCGGTCTGAAGGCGGGCACTCCGGTGGTCGTTGGAGGAGGCGACGTGCAGCTTGGTTGCCTTGGGTTAGGCGTTGTGCGTCCGGCACAAACCGCGGTTCTTGGCGGCACATTCTGGCAGCAAGTTGTAAATTTAGCCGCGCCGGTGACAGACCCAGAAATGAACGTGCGCGTTAATCCTCATGTTATTCCTGGCATGGTACAAGCTGAATCTATAAGCTTTTTTACCGGACTCACCATGCGCTGGTTCCGCGATGCTTTCTGTGCCGAAGAAAAACTGATTGCCGAACGTTTAGGCATCGACACCTATACGCTGCTGGAAGAGATGGCCAGTCGGGTGCCGCCTGGGTCGTGGGGCGTAATGCCGATCTTCTCCGACAGAATGCGCTTTAAAACCTGGTATCACGCTGCGCCTTCCTTTATTAACTTGTCCATTGACCCGGATAAATGTAACAAAGCGACATTGTTCCGTGCGCTGGAAGAAAATGCGGCGATTGTATCAGCGTGTAACTTGCAGCAAATTGCTGATTTCTCGAATATTCATCCTTCATCGTTAGTCTTTGCAGGCGGAGGTTCAAAAGGGAAATTATGGAGTCAAATTCTCGCTGATGTCTCGGGATTACCCGTCAATATTCCGGTGGTCAAAGAAGCCACTGCATTAGGATGTGCCATTGCAGCTGGCGTCGGTGCCGGAATTTTTTCATCAATGGCAGAAACCGGAGAACGCCTGGTTCGCTGGGAACGGACGCACACACCAGACCCGGAAAAGCATGAACTTTATCAGGATTCACGCGATAAGTGGCAGGCAGTTTATCAGGATCAGCTGGGGCTGGTTGATCATGGACTGACGACGTCGTTATGGAAAGCGCCTGGGTTATAG", + "dna_sequence_length": 1593, + "functions": [ + "autoinducer-2 (AI-2) kinase" + ], + "id": "CDS_1497", + "location": [ + [ + "NC_000913", + 1600209, + "-", + 1593 + ] + ], + "md5": "f885072d9a8d0abd28b77811be843ed1", + "parent_gene": "", + "protein_md5": "e2929a88737b103f5e2461f3cb15e79c", + "protein_translation": "MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL", + "protein_translation_length": 530, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005045" + ], + [ + "gene_synonym", + "ECK1505" + ], + [ + "gene_synonym", + "EcoGene:EG13805" + ], + [ + "gene_synonym", + "GI:16129471" + ], + [ + "gene_synonym", + "GeneID:946070" + ], + [ + "gene_synonym", + "JW1505" + ], + [ + "gene_synonym", + "NP_416029.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76141" + ], + [ + "gene_synonym", + "b1512" + ], + [ + "gene_synonym", + "lsrR" + ], + [ + "gene_synonym", + "ydeW" + ] + ], + "dna_sequence": "ATGACAATCAACGATTCGGCAATTTCAGAACAGGGAATGTGTGAAGAAGAACAGGTCGCGCGGATCGCGTGGTTTTACTATCACGACGGGCTGACCCAGAGCGAGATCAGCGATCGTCTCGGCCTGACACGTTTGAAAGTGTCGCGATTGCTGGAGAAAGGGCATCAGTCCGGCATTATTCGCGTACAGATTAATTCTCGCTTTGAAGGCTGTCTGGAATATGAAACTCAATTACGTCGTCAGTTTTCGCTGCAACATGTCCGGGTGATCCCTGGGCTTGCGGATGCTGATGTCGGTGGGCGACTGGGGATAGGCGCGGCGCATATGTTGATGAGTTTACTTCAACCACAACAGATGCTGGCGATTGGTTTTGGCGAGGCAACCATGAATACGCTGCAACGCTTAAGTGGTTTTATTTCGTCACAGCAAATTCGCCTGGTCACGCTCTCCGGTGGCGTCGGTTCTTATATGACGGGAATCGGGCAGCTTAACGCGGCGTGCAGTGTGAATATTATTCCGGCTCCGTTGCGGGCATCCTCCGCTGACATTGCCCGTACGCTAAAAAATGAAAATTGCGTCAAAGATGTTCTGTTAGCCGCGCAAGCAGCGGATGTGGCGATTGTCGGCATTGGTGCTGTGAGTCAACAGGACGATGCGACAATCATTCGCTCCGGTTATATCAGCCAGGGCGAACAGTTAATGATTGGCCGAAAAGGGGCGGTTGGCGACATTTTAGGCTACTTTTTTGATGCAAAAGGTGACGTTGTCACGAATATCAAAATACATAACGAACTGATTGGCTTACCTTTAAGCGCGCTGAAGACCATACCCGTCCGGGTTGGCGTGGCAGGGGGAGAAAATAAAGCCGAAGCAATTGCCGCTGCAATGAAAGGCGGTTATATCAACGCACTGGTTACCGATCAGGACACAGCAGCGGCGATTTTACGTAGTTAA", + "dna_sequence_length": 954, + "functions": [ + "lsr operon transcriptional repressor" + ], + "id": "CDS_1498", + "location": [ + [ + "NC_000913", + 1601241, + "-", + 954 + ] + ], + "md5": "792d96a4d3fb71f855a24dfbb3130beb", + "parent_gene": "", + "protein_md5": "3c73933c9d6e747ef6c5b84b70ff8e1b", + "protein_translation": "MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005056" + ], + [ + "gene_synonym", + "ECK1506" + ], + [ + "gene_synonym", + "EcoGene:EG13806" + ], + [ + "gene_synonym", + "GI:16129472" + ], + [ + "gene_synonym", + "GeneID:945680" + ], + [ + "gene_synonym", + "JW1506" + ], + [ + "gene_synonym", + "NP_416030.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77257" + ], + [ + "gene_synonym", + "b1513" + ], + [ + "gene_synonym", + "ego" + ], + [ + "gene_synonym", + "lsrA" + ], + [ + "gene_synonym", + "ydeX" + ] + ], + "dna_sequence": "ATGCAAACGAGTGATACCCGCGCGTTACCGCTACTTTGCGCCCGCTCGGTTTATAAACAGTATTCAGGGGTCAATGTCCTGAAAGGCATCGATTTTACGTTGCATCAGGGGGAGGTCCACGCCCTGCTCGGCGGCAATGGTGCCGGTAAATCGACGTTAATGAAGATTATTGCCGGTATTACCCCTGCTGATAGCGGTACGCTGGAGATTGAGGGCAACAACTACGTCAGATTAACGCCAGTTCATGCTCATCAGCTGGGTATTTATCTCGTTCCCCAGGAACCGCTGCTTTTCCCAAGCCTGTCGATAAAAGAAAACATCCTGTTTGGGCTGGCAAAAAAACAGCTCTCCATGCAGAAAATGAAGAACTTGCTGGCGGCGCTGGGCTGCCAGTTTGATCTGCATAGTCTGGCAGGATCGCTGGATGTCGCCGATCGCCAAATGGTGGAAATCCTCCGCGGGCTGATGCGCGACTCGCGGATTCTGATCCTCGATGAACCTACCGCCTCGCTTACCCCTGCGGAAACCGAACGCTTGTTTAGTCGCTTGCAAGAGCTGCTTGCTACTGGCGTGGGTATTGTTTTTATCTCGCATAAGCTGCCGGAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATGCCGCCGGAACGCCGGTGCTGACACTGGAAAATCTGACCGGCGAAGGTTTCAGGAATGTCAGCCTGACGCTCAATGCCGGAGAAATTCTGGGCCTGGCTGGGCTGGTGGGGGCCGGACGCACAGAACTGGCCGAGACGCTCTATGGTCTGCGTACTTTGCGTGGCGGACGCATTATGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGCCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCTGGAAGAGATCGAACTGATGGCAGATCGTGTGTATGTGATGCATCAGGGCGAAATTACCCACTCTGCACTGACCGAGCGCGATATTAATGTCGAGACTATTATGCGCGTTGCCTTCGGCGATAGTCAGCGTCAGGAGGCGTCATGCTGA", + "dna_sequence_length": 1536, + "functions": [ + "autoinducer 2 import ATP-binding protein" + ], + "id": "CDS_1499", + "location": [ + [ + "NC_000913", + 1601490, + "+", + 1536 + ] + ], + "md5": "db26866471281bbb636b08e893f94e76", + "parent_gene": "", + "protein_md5": "57bb739d7a27c961ba681e6d96f8f175", + "protein_translation": "MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFSRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPAVREKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNGKEINKLSTGERLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQGEITHSALTERDINVETIMRVAFGDSQRQEASC", + "protein_translation_length": 511, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005059" + ], + [ + "gene_synonym", + "ECK1507" + ], + [ + "gene_synonym", + "EcoGene:EG13807" + ], + [ + "gene_synonym", + "GI:16129473" + ], + [ + "gene_synonym", + "GeneID:946105" + ], + [ + "gene_synonym", + "JW1507" + ], + [ + "gene_synonym", + "NP_416031.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77672" + ], + [ + "gene_synonym", + "b1514" + ], + [ + "gene_synonym", + "lsrC" + ], + [ + "gene_synonym", + "ydeY" + ] + ], + "dna_sequence": "ATGCTGAAGTTTATTCAGAACAACCGTGAAATCACGGCACTGCTGGCGGTGGTGCTGCTGTTTGTATTACCCGGTTTTCTCGACCGCCAGTATTTAAGTGTGCAAACGCTGACCATGGTTTATAGCAGCGCGCAAATCCTGATCCTGCTGGCAATGGGCGCGACGCTGGTAATGCTTACGCGCAATATTGATGTTTCAGTGGGTTCGATTACCGGAATGTGCGCGGTGCTGTTGGGGATGTTACTGAACGCAGGATATTCACTACCTGTTGCTTGTGTCGCGACTTTACTGCTTGGTTTGCTCGCGGGATTTTTCAACGGTGTCCTGGTCGCGTGGCTAAAGATCCCTGCCATTGTTGCCACCCTTGGCACGTTAGGGTTGTACAGAGGCATCATGTTGCTGTGGACTGGCGGCAAATGGATTGAAGGGTTACCCGCCGAACTGAAACAGCTCTCCGCCCCGCTGCTGCTTGGCGTTTCAGCAATTGGTTGGTTGACGATAATTCTGGTGGCATTTATGGCCTGGCTGCTGGCAAAGACGGCGTTTGGACGCAGTTTTTATGCCACGGGCGATAATTTACAGGGCGCTCGTCAACTGGGCGTTCGTACTGAAGCCATTCGCATTGTGGCATTTTCGTTGAACGGCTGCATGGCGGCACTGGCGGGAATTGTGTTTGCTTCGCAGATTGGTTTTATCCCCAACCAGACCGGTACCGGGCTGGAGATGAAAGCAATTGCAGCCTGCGTGCTGGGCGGCATTAGTTTGCTCGGTGGTTCCGGTGCGATCATTGGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACTGGTGCTGTTGCGCATTCCGGCATGGTGGAATGATTTTATCGCGGGTCTGGTTCTGCTGGCGGTGCTGGTGTTTGATGGACGCCTGCGTTGTGCGCTGGAACGTAATCTACGGCGGCAAAAATATGCCCGCTTTATGACGCCACCGCCATCCGTTAAACCCGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAA", + "dna_sequence_length": 1029, + "functions": [ + "autoinducer 2 import system permease protein" + ], + "id": "CDS_1500", + "location": [ + [ + "NC_000913", + 1603019, + "+", + 1029 + ] + ], + "md5": "c71de73e26ba880b797e02ea50e5378f", + "parent_gene": "", + "protein_md5": "d227b7a05efcca392027e22ffb10c296", + "protein_translation": "MLKFIQNNREITALLAVVLLFVLPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLLGVSAIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKPASSGKKREAA", + "protein_translation_length": 342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005061" + ], + [ + "gene_synonym", + "ECK1508" + ], + [ + "gene_synonym", + "EcoGene:EG13808" + ], + [ + "gene_synonym", + "GI:16129474" + ], + [ + "gene_synonym", + "GeneID:946264" + ], + [ + "gene_synonym", + "JW1508" + ], + [ + "gene_synonym", + "NP_416032.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS1" + ], + [ + "gene_synonym", + "b1515" + ], + [ + "gene_synonym", + "lsrD" + ], + [ + "gene_synonym", + "ydeZ" + ] + ], + "dna_sequence": "ATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGCCGGAGCGACGGGGTACGAAGGTATTGGTGGATTCCCGATGGCGTTTACAGATTTCGCTAACCTGGATGTGCTGGGACTCCCCGTTCCGCTGATTATCTTCCTGATATGTCTCCTCGTTTTCTGGCTCTGGCTGCATAAAACCCATGCCGGACGTAATGTGTTTTTGATTGGGCAAAGCCCGCGCGTGGCGCTTTATAGCGCGATTCCAGTTAACCGTACCTTATGTGCGCTCTATGCCATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGGGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAATGGCAGGAGTGCCAAATCAGGTGTCCAGCGCCCTTTCCGGTGCGCTACTTATCGTCGTTGTCGTAGGTCGTTCCGTTAGCCTGCATCGCCAGCAAATTAAAGAGTGGCTGGCGCGTCGGGCCAATAACCCATTGCCATAA", + "dna_sequence_length": 993, + "functions": [ + "autoinducer 2 import system permease protein" + ], + "id": "CDS_1501", + "location": [ + [ + "NC_000913", + 1604047, + "+", + 993 + ] + ], + "md5": "4fea17ae40bcac0e5f317c197ee2e41c", + "parent_gene": "", + "protein_md5": "2e7749717efd45fefa0c2935015c7f5f", + "protein_translation": "MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005063" + ], + [ + "gene_synonym", + "ECK1509" + ], + [ + "gene_synonym", + "EcoGene:EG13809" + ], + [ + "gene_synonym", + "GI:16129475" + ], + [ + "gene_synonym", + "GeneID:945418" + ], + [ + "gene_synonym", + "JW1509" + ], + [ + "gene_synonym", + "NP_416033.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76142" + ], + [ + "gene_synonym", + "b1516" + ], + [ + "gene_synonym", + "lsrB" + ], + [ + "gene_synonym", + "yneA" + ] + ], + "dna_sequence": "ATGACACTTCATCGCTTTAAGAAAATCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGATTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTGGTCAGGTACAGTTGATTAATAACTTCGTCAATCAAGGTTATAACGCCATTATCGTTTCTGCGGTTTCGCCTGATGGCTTGTGTCCGGCACTGAAACGCGCCATGCAACGTGGTGTGAGAGTGCTGACCTGGGACTCTGATACTAAACCGGAGTGCCGCTCTTACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTGGCTATAACGATGCCACTAAATCGTTACAAACCGCAGAAGGAATATTAAAAGCGTATAGCGATCTCGACGCCATTATCGCCCCCGATGCCAACGCCCTGCCCGCTGCCGCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCAAATGTGATGCGCCCGTATGTAGAGCGCGGCACGGTGAAAGAATTTGGCCTGTGGGATGTGGTTCAGCAAGGCAAAATTTCAGTGTATGTCGCGGATGCATTATTGAAAAAAGGATCAATGAAAACGGGCGACAAGCTGGATATCAAGGGCGTAGGTCAGGTTGAAGTCTCGCCAAACAGCGTTCAGGGCTATGACTACGAAGCGGATGGTAATGGCATCGTACTGTTACCGGAGCGCGTGATATTCAACAAAGAGAATATCGGCAAATACGATTTCTGA", + "dna_sequence_length": 1023, + "functions": [ + "autoinducer 2-binding protein" + ], + "id": "CDS_1502", + "location": [ + [ + "NC_000913", + 1605051, + "+", + 1023 + ] + ], + "md5": "cb2f6993225173d7cd129781e3260b2a", + "parent_gene": "", + "protein_md5": "8d3124034af62fe96c937d07034f0424", + "protein_translation": "MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005065" + ], + [ + "gene_synonym", + "ECK1510" + ], + [ + "gene_synonym", + "EcoGene:EG13810" + ], + [ + "gene_synonym", + "GI:16129476" + ], + [ + "gene_synonym", + "GeneID:946071" + ], + [ + "gene_synonym", + "JW1510" + ], + [ + "gene_synonym", + "NP_416034.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76143" + ], + [ + "gene_synonym", + "b1517" + ], + [ + "gene_synonym", + "lsrF" + ], + [ + "gene_synonym", + "yneB" + ] + ], + "dna_sequence": "ATGGCAGATTTAGACGATATTAAAGATGGTAAAGATTTTCGTACCGATCAACCGCAAAAAAATATCCCTTTTACCCTGAAAGGTTGCGGTGCGCTGGATTGGGGAATGCAGTCACGCTTATCGCGGATATTTAATCCGAAAACGGGTAAAACCGTGATGCTGGCTTTTGACCATGGTTATTTTCAGGGACCGACTACCGGACTTGAACGCATTGATATAAATATCGCCCCGCTGTTTGAACATGCCGATGTATTAATGTGTACGCGCGGCATTTTGCGCAGCGTAGTTCCCCCTGCGACCAATAGGCCGGTGGTACTGCGGGCGTCAGGTGCGAACTCTATTCTGGCGGAATTAAGTAATGAAGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAAAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATCGCCGCTGAAATGGGGGCGCAAATTATCAAAACCTATTATGTCGAAAAAGGTTTTGAACGGATTGTTGCCGGATGTCCGGTACCCATTGTTATTGCTGGCGGTAAAAAATTACCGGAGCGCGAGGCGCTGGAAATGTGCTGGCAGGCTATCGATCAGGGCGCTTCTGGTGTGGATATGGGGCGTAATATTTTCCAGTCTGACCATCCGGTGGCGATGATGAAAGCCGTACAGGCGGTGGTTCACCATAACGAAACGGCTGATCGGGCATATGAACTCTATCTGAGTGAAAAACAGTAA", + "dna_sequence_length": 876, + "functions": [ + "putative autoinducer-2 (AI-2) aldolase" + ], + "id": "CDS_1503", + "location": [ + [ + "NC_000913", + 1606100, + "+", + 876 + ] + ], + "md5": "acd0e950e4eeb8f1cddc7a00cf6bf274", + "parent_gene": "", + "protein_md5": "466c700e81ac1678d53bc88c7e4df6dd", + "protein_translation": "MADLDDIKDGKDFRTDQPQKNIPFTLKGCGALDWGMQSRLSRIFNPKTGKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSEKQ", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005067" + ], + [ + "gene_synonym", + "ECK1511" + ], + [ + "gene_synonym", + "EcoGene:EG13811" + ], + [ + "gene_synonym", + "GI:16129477" + ], + [ + "gene_synonym", + "GeneID:946073" + ], + [ + "gene_synonym", + "JW1511" + ], + [ + "gene_synonym", + "NP_416035.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64461" + ], + [ + "gene_synonym", + "b1518" + ], + [ + "gene_synonym", + "lsrG" + ], + [ + "gene_synonym", + "yneC" + ] + ], + "dna_sequence": "ATGCACGTCACACTGGTTGAAATTAACGTTCATGAAGACAAGGTTGACGAGTTTATCGAAGTTTTTCGCCAGAACCACCTGGGCTCTGTACAGGAAGAAGGCAATTTGCGCTTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGA", + "dna_sequence_length": 291, + "functions": [ + "autoinducer-2 (AI-2) degrading protein LsrG" + ], + "id": "CDS_1504", + "location": [ + [ + "NC_000913", + 1606999, + "+", + 291 + ] + ], + "md5": "42440114601099d944fe87e6bb59d9d8", + "parent_gene": "", + "protein_md5": "bc40d26e6f0eb4747f7ca30cf9c0f29c", + "protein_translation": "MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005070" + ], + [ + "gene_synonym", + "ECK1512" + ], + [ + "gene_synonym", + "EcoGene:EG13812" + ], + [ + "gene_synonym", + "GI:16129478" + ], + [ + "gene_synonym", + "GeneID:946074" + ], + [ + "gene_synonym", + "JW1512" + ], + [ + "gene_synonym", + "NP_416036.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76145" + ], + [ + "gene_synonym", + "b1519" + ], + [ + "gene_synonym", + "lsrE" + ], + [ + "gene_synonym", + "tam" + ], + [ + "gene_synonym", + "yneD" + ] + ], + "dna_sequence": "ATGTCTGACTGGAACCCCTCTTTATATCTACACTTTTCCGCTGAACGATCGCGTCCGGCGGTGGAGCTGCTTGCCAGAGTGCCGCTGGAAAATGTCGAATATGTTGCCGATCTTGGCTGTGGCCCAGGTAACAGCACCGCCCTTCTACAACAACGTTGGCCTGCGGCCAGGATAACAGGCATCGACTCGTCTCCGGCGATGATTGCTGAAGCGCGCAGTGCTTTGCCAGACTGCCAGTTCGTGGAAGCAGACATCCGCAACTGGCAACCGGTACAGGCACTCGATCTGATTTTTGCTAATGCCTCACTGCAATGGCTGCCCGACCACTACGAATTGTTTCCTCATCTGGTTTCTTTACTTAATCCGCAGGGCGTGCTGGCAGTACAGATGCCAGATAACTGGCTGGAGCCGACCCATGTGCTCATGCGCGAAGTTGCCTGGGAACAAAACTACCCGGATCGCGGGCGTGAGCCGTTGGCTGGCGTTCATGCTTACTACGATATTTTGAGCGAAGCCGGATGTGAGGTCGATATCTGGCGAACCACCTACTATCACCAGATGCCGTCACACCAGGCGATTATCGATTGGGTGACTGCCACTGGATTACGTCCGTGGTTACAGGATCTGACCGAGAGCGAACAGCAGCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAA", + "dna_sequence_length": 759, + "functions": [ + "trans-aconitate methyltransferase" + ], + "id": "CDS_1505", + "location": [ + [ + "NC_000913", + 1607346, + "+", + 759 + ] + ], + "md5": "04854fbe612c4013d4ff3cf6b9f0473d", + "parent_gene": "", + "protein_md5": "b77f1138e788d95be99dd42a9de71400", + "protein_translation": "MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLKRYHQMLEEQYPLQENGQILLAFPRLFIVARRME", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005072" + ], + [ + "gene_synonym", + "ECK1513" + ], + [ + "gene_synonym", + "EcoGene:EG13813" + ], + [ + "gene_synonym", + "GI:90111287" + ], + [ + "gene_synonym", + "GeneID:946188" + ], + [ + "gene_synonym", + "JW5245" + ], + [ + "gene_synonym", + "NP_416037.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76146" + ], + [ + "gene_synonym", + "b1520" + ], + [ + "gene_synonym", + "yneE" + ] + ], + "dna_sequence": "ATGATTGTTCGTCCACAACAACACTGGCTGCGCCGTATTTTTGTCTGGCACGGCTCAGTATTATCCAAGATATCCTCGCGCTTACTACTCAATTTTCTCTTTTCTATCGCTGTTATTTTCATGCTGCCCTGGTACACGCATCTGGGCATCAAATTCACCCTCGCACCGTTCAGCATTCTCGGTGTCGCCATCGCCATTTTTCTTGGTTTTCGTAATAATGCCGGGTACGCCCGTTACGTTGAAGCGCGAAAACTTTGGGGGCAGTTGATGATTGCCTCACGGTCGTTACTGCGCGAGGTAAAAACGACATTGCCGGATTCGGCAAGTGTAAGGGAGTTTGCCCGGCTGCAAATCGCTTTCGCCCACTGTTTACGCATGACATTACGCAAACAGCCACAGGCGGAAGTGCTGGCTCATTATCTCAAGACTGAAGATCTTCAGCGTGTACTGGCTTCGAACTCTCCAGCTAACCGTATCTTGTTAATAATGGGAGAATGGTTGGCGGTTCAGCGCCGCAATGGACAGCTTTCAGATATCCTGTTTATTAGCCTCAACGATCGGCTTAATGATATTTCAGCGGTCCTGGCAGGATGCGAGCGCATTGCCTATACGCCAATTCCCTTTGCCTACACCCTGATTTTGCATCGTACCGTTTATCTGTTTTGTATCATGCTGCCGTTCGCGCTGGTCGTGGACCTGCATTACATGACGCCTTTTATCTCTGTGCTGATTTCCTACACTTTTATTTCGCTGGATTGTCTGGCGGAAGAACTGGAAGATCCGTTCGGTACTGAAAACAATGATTTACCACTGGATGCCATCTGCAACGCTATTGAAATTGACCTGTTACAGATGAACGATGAAGCCGAAATTCCAGCAAAAATTCTTCCCGATCGTCATTACCAGCTGACGTGA", + "dna_sequence_length": 915, + "functions": [ + "bestrophin family putative inner membrane protein" + ], + "id": "CDS_1506", + "location": [ + [ + "NC_000913", + 1609022, + "-", + 915 + ] + ], + "md5": "11bdc40dc6e52fd512cde975032e5cbc", + "parent_gene": "", + "protein_md5": "3249c2a0451c6979bae4e13cf7c4b8cd", + "protein_translation": "MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRHYQLT", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005076" + ], + [ + "gene_synonym", + "ECK1514" + ], + [ + "gene_synonym", + "EcoGene:EG11065" + ], + [ + "gene_synonym", + "GI:49176119" + ], + [ + "gene_synonym", + "GeneID:945542" + ], + [ + "gene_synonym", + "JW1514" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6L7" + ], + [ + "gene_synonym", + "YP_025302.1" + ], + [ + "gene_synonym", + "b1521" + ], + [ + "gene_synonym", + "uxaB" + ] + ], + "dna_sequence": "GTGAAAACACTAAATCGTCGCGATTTTCCCGGTGCACAGTATCCAGAACGTATCATTCAGTTTGGTGAAGGTAACTTCCTGCGCGCCTTTGTTGACTGGCAAATCGATCTCCTGAATGAGCACACCGATCTGAATTCTGGCGTGGTCGTTGTTCGTCCGATTGAAACTTCATTCCCGCCGTCACTGAGCACGCAGGATGGTCTGTACACCACCATTATCCGTGGCCTGAATGAGAAGGGGGAAGCGGTCAGCGACGCGCGTCTGATTCGCTCGGTTAATCGTGAAATCAGCGTCTACAGTGAATACGATGAATTCCTGAAACTGGCGCACAACCCGGAAATGCGCTTTGTTTTCTCTAACACCACCGAAGCGGGTATCAGCTACCATGCGGGCGATAAATTCGATGACGCGCCAGCGGTAAGCTATCCGGCAAAACTGACCCGTCTGCTGTTCGAACGCTTTAGCCATTTCAACGGTGCGCTGGATAAAGGTTGGATCATCATTCCGTGTGAGTTGATTGACTACAATGGCGACGCGTTGCGTGAACTGGTGCTGCGCTATGCGCAAGAGTGGGCACTGCCAGAAGCATTTATTCAATGGCTGGATCAGGCTAACAGCTTCTGTTCTACGCTGGTGGACCGTATCGTTACCGGTTATCCGCGCGATGAAGTGGCTAAACTGGAAGAAGAACTGGGTTATCACGATGGTTTTCTCGACACCGCTGAACACTTTTACCTGTTTGTGATTCAGGGACCGAAATCCTTAGCGACTGAACTGCGTCTGGACAAATATCCGCTCAACGTGCTGATTGTTGACGATATTAAACCGTACAAAGAACGCAAAGTGGCAATCCTCAACGGTGCGCACACCGCGCTGGTGCCGGTGGCGTTCCAGGCAGGGCTGGATACCGTAGGTGAAGCGATGAACGATGCTGAAATTTGCGCATTCGTTGAAAAAGCTATCTACGAAGAAATTATTCCGGTACTGGATTTGCCTCGTGATGAACTGGAATCTTTCGCCAGTGCAGTCACCGGGCGTTTCCGTAACCCGTACATTAAGCATCAGCTGCTGTCTATCGCGCTCAACGGTATGACCAAGTTCCGCACCCGCATCCTGCCACAGCTGCTGGCAGGGCAGAAGGCAAACGGCACACTTCCGGCGCGCCTTACTTTCGCATTAGCGGCATTGATTGCGTTCTATCGTGGTGAGCGTAACGGCGAAACATATCCGGTACAGGACGATGCACACTGGCTGGAACGTTATCAGCAACTCTGGAGCCAGCATCGTGACCGTGTTATCGGCACCCAGGAACTGGTAGCGATTGTTTTGGCAGAAAAAGACCACTGGGAGCAGGACCTGACGCAAGTGCCTGGTCTGGTCGAGCAGGTTGCTAATGACCTGGATGCGATTCTCGAAAAAGGGATGCGCGAAGCTGTACGTCCGTTGTGCTAA", + "dna_sequence_length": 1452, + "functions": [ + "altronate oxidoreductase, NAD-dependent" + ], + "id": "CDS_1507", + "location": [ + [ + "NC_000913", + 1610680, + "-", + 1452 + ] + ], + "md5": "89d98acdddfa2eb35dd92290c97bb06a", + "parent_gene": "", + "protein_md5": "2c493d343268245a10c04c29454fe860", + "protein_translation": "MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVVVRPIETSFPPSLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEYDEFLKLAHNPEMRFVFSNTTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGALDKGWIIIPCELIDYNGDALRELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTGYPRDEVAKLEEELGYHDGFLDTAEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAGLDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRDELESFASAVTGRFRNPYIKHQLLSIALNGMTKFRTRILPQLLAGQKANGTLPARLTFALAALIAFYRGERNGETYPVQDDAHWLERYQQLWSQHRDRVIGTQELVAIVLAEKDHWEQDLTQVPGLVEQVANDLDAILEKGMREAVRPLC", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005081" + ], + [ + "gene_synonym", + "ECK1515" + ], + [ + "gene_synonym", + "EcoGene:EG13814" + ], + [ + "gene_synonym", + "GI:16129481" + ], + [ + "gene_synonym", + "GeneID:947422" + ], + [ + "gene_synonym", + "JW5825" + ], + [ + "gene_synonym", + "NP_416039.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76147" + ], + [ + "gene_synonym", + "b1522" + ], + [ + "gene_synonym", + "yneF" + ] + ], + "dna_sequence": "TTGCTTGCGGACTGGTTCAGTGAGCAATTCTCAACGGGCGTGTTGATCGTGCCTTGTATGCTGACGTTGGCTATTCCTGGAGTGCTGCCGCGCTTTAAAGCAGAACAGATGATGCCCGCCATCGCGCTTATTGTGTCGGTTATTGCCTCGGTAGTCATTGGCGGAGCGGGGAGTCTGGCGTTCCCGCTGCCTGCATTAATCTGGTGTGCAGTGCGCTATACGCCGCAGGTAACATGTCTGTTGACCTTTGTCACCGGTGCGGTGGAAATCGTACTGGTGGCAAATTCGGTGATTGATATCTCGGTCGGTTCGCCGTTCTCCATTCCGCAAATGTTCTCCGCACGTCTCGGTATTGCCACGATGGCGATATGCCCAATTATGGTTTCTTTTAGCGTGGCAGCGATCAATTCGCTAATGAAGCAAGTTGCGCTGCGAGCCGACTTTGATTTTCTGACTCAGGTTTACTCACGGTCCGGTCTTTATGAGGCGCTGAAAAGTCCATCGCTGAAACAGACACAACATCTGACTGTCATGCTGCTTGATATCGACTATTTCAAAAGCATTAACGATAACTATGGACATGAATGTGGCGATAAAGTGTTAAGCGTGTTTGCCCGGCATATTCAGAAGATTGTCGGTGATAAGGGGCTGGTGGCGCGAATGGGCGGCGAAGAATTTGCTGTTGCAGTGCCGTCGGTGAATCCTGTCGATGGTCTGCTAATGGCGGAAAAAATCCGTAAAGGCGTTGAACTGCAACCATTCACCTGGCAACAAAAAACGCTTTATCTCACGGTAAGTATTGGCGTCGGTAGTGGTCGCGCATCGTACCTAACGCTGACCGATGACTTTAATAAATTGATGGTCGAAGCCGATACGTGTCTGTATCGCTCGAAGAAAGATGGGCGCAACCGTACCAGCACTATGCGTTACGGTGAGGAAGTTGTCTGA", + "dna_sequence_length": 948, + "functions": [ + "putative membrane-bound diguanylate cyclase" + ], + "id": "CDS_1508", + "location": [ + [ + "NC_000913", + 1611854, + "-", + 948 + ] + ], + "md5": "55e19692ee62181138828d1b219835a4", + "parent_gene": "", + "protein_md5": "0afc34881eada4d2ebde56e2a306650f", + "protein_translation": "MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYLTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005084" + ], + [ + "gene_synonym", + "ECK1516" + ], + [ + "gene_synonym", + "EcoGene:EG13815" + ], + [ + "gene_synonym", + "GI:16129482" + ], + [ + "gene_synonym", + "GeneID:946171" + ], + [ + "gene_synonym", + "JW1516" + ], + [ + "gene_synonym", + "NP_416040.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76148" + ], + [ + "gene_synonym", + "b1523" + ], + [ + "gene_synonym", + "yneG" + ] + ], + "dna_sequence": "ATGCAGTCTCTCGATCCACTCTTCGCGCGTTTATCCCGTTCAAAATTTCGCTCTCGCTTTCGTCTGGGCATGAAAGAGCGTCAGTATTGCCTGGAGAAAGGCGCGCCAGTCATCGAACAACATGCGGCGGATTTTGTCGCTAAACGTCTTGCTCCGGCATTACCGGCTAATGACGGTAAGCAAACCCCCATGCGCGGGCATCCGGTGTTTATCGCTCAGCACGCCACCGCGACCTGCTGTCGCGGTTGTCTGGCTAAGTGGCATAACATTCCGCAGGGTGTTTCGTTAAGCGAAGAACAACAACGTTATATCGTGGCGGTAATCTATCACTGGCTGGTTGTACAGATGAATCAGCCATGA", + "dna_sequence_length": 360, + "functions": [ + "DUF4186 family protein" + ], + "id": "CDS_1509", + "location": [ + [ + "NC_000913", + 1612325, + "-", + 360 + ] + ], + "md5": "86f92c7a8ede5c60e35d457308605a91", + "parent_gene": "", + "protein_md5": "f27d652a5e1da40754052365306a6c70", + "protein_translation": "MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005086" + ], + [ + "gene_synonym", + "ECK1517" + ], + [ + "gene_synonym", + "EcoGene:EG13816" + ], + [ + "gene_synonym", + "GI:16129483" + ], + [ + "gene_synonym", + "GeneID:944973" + ], + [ + "gene_synonym", + "JW1517" + ], + [ + "gene_synonym", + "NP_416041.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W0" + ], + [ + "gene_synonym", + "b1524" + ], + [ + "gene_synonym", + "glsA2" + ], + [ + "gene_synonym", + "glsB" + ], + [ + "gene_synonym", + "yneH" + ] + ], + "dna_sequence": "GTGGCAGTCGCCATGGATAATGCAATTTTAGAAAACATCTTGCGGCAAGTGCGGCCGCTCATTGGTCAGGGTAAAGTCGCGGATTATATTCCGGCGCTGGCTACAGTAGACGGTTCCCGATTGGGGATTGCTATCTGTACCGTTGACGGACAGCTTTTTCAGGCCGGAGACGCGCAAGAACGTTTTTCCATTCAGTCTATTTCCAAAGTGCTGAGTCTCGTTGTCGCCATGCGTCATTACTCCGAAGAGGAAATCTGGCAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATGGAGCAGGGTATACCGCGTAATCCGTTCATTAATGCCGGTGCGCTGGTGGTCTGCGATATGTTGCAAGGGCGATTAAGCGCACCACGGCAACGTATGCTGGAAGTCGTGCGCGGCTTAAGCGGTGTGTCTGATATTTCCTACGATACGGTGGTAGCGCGTTCCGAATTTGAACATTCCGCGCGAAATGCGGCTATCGCCTGGCTGATGAAGTCGTTTGGCAATTTCCATCATGACGTGACAACCGTTCTGCAAAACTACTTTCATTACTGCGCTCTGAAAATGAGCTGTGTAGAGCTGGCCCGGACGTTTGTCTTTCTGGCTAATCAGGGGAAAGCTATTCATATTGATGAACCAGTGGTGACGCCAATGCAGGCGCGGCAAATTAACGCGCTGATGGCGACCAGTGGTATGTACCAGAACGCGGGGGAGTTTGCCTGGCGGGTGGGGCTACCGGCGAAATCTGGCGTTGGTGGCGGTATTGTGGCGATTGTTCCGCATGAAATGGCCATCGCTGTCTGGAGTCCGGAACTGGATGATGCAGGTAACTCGCTTGCGGGTATTGCCGTTCTTGAACAATTGACGAAACAGTTAGGGCGTTCGGTTTATTAA", + "dna_sequence_length": 927, + "functions": [ + "glutaminase 2" + ], + "id": "CDS_1510", + "location": [ + [ + "NC_000913", + 1613251, + "-", + 927 + ] + ], + "md5": "25612ed9568f11f56e103b3ab5fc3d05", + "parent_gene": "", + "protein_md5": "aa8e8e7ebdcc5c6fefedf51fccc1889f", + "protein_translation": "MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005092" + ], + [ + "gene_synonym", + "ECK1518" + ], + [ + "gene_synonym", + "EcoGene:EG13817" + ], + [ + "gene_synonym", + "GI:90111288" + ], + [ + "gene_synonym", + "GeneID:947440" + ], + [ + "gene_synonym", + "JW5247" + ], + [ + "gene_synonym", + "NP_416042.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76149" + ], + [ + "gene_synonym", + "b1525" + ], + [ + "gene_synonym", + "sad" + ], + [ + "gene_synonym", + "yneI" + ] + ], + "dna_sequence": "ATGACCATTACTCCGGCAACTCATGCAATTTCGATAAATCCTGCCACGGGTGAACAACTTTCTGTGCTGCCGTGGGCTGGCGCTGACGATATCGAAAACGCACTTCAGCTGGCGGCAGCAGGCTTTCGCGACTGGCGCGAGACAAATATAGATTATCGTGCTGAAAAACTGCGTGATATCGGTAAGGCTCTGCGCGCTCGTAGCGAAGAAATGGCGCAAATGATCACCCGCGAAATGGGCAAACCAATCAACCAGGCGCGCGCTGAAGTGGCGAAATCGGCGAATTTGTGTGACTGGTATGCAGAACATGGTCCGGCAATGCTGAAGGCGGAACCTACGCTGGTGGAAAATCAGCAGGCGGTTATTGAGTATCGACCGTTGGGGACGATTCTGGCGATTATGCCGTGGAATTTTCCGTTATGGCAGGTGATGCGTGGCGCTGTTCCCATCATTCTTGCAGGTAACGGCTACTTACTTAAACATGCGCCGAATGTGATGGGCTGTGCACAGCTCATTGCCCAGGTGTTTAAAGATGCGGGTATCCCACAAGGCGTATATGGCTGGCTGAATGCCGACAACGACGGTGTCAGTCAGATGATTAAAGACTCGCGCATTGCTGCTGTCACGGTGACCGGAAGTGTTCGTGCGGGAGCGGCTATTGGCGCACAGGCTGGAGCGGCACTGAAAAAATGCGTACTGGAACTGGGCGGTTCGGATCCGTTTATTGTGCTTAACGATGCCGATCTGGAACTGGCGGTGAAAGCGGCGGTAGCCGGACGTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAGCTGCGGCAGCCTTGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGGCGCAGGGTGCGCGTTTGTTACTGGGCGGGGAAAAGATGGCTGGGGCAGGTAACTACTATCCGCCAACGGTTCTGGCGAATGTTACCCCAGAAATGACCGCGTTTCGGGAAGAAATGTTTGGCCCCGTTGCGGCAATCACCATTGCGAAAGATGCAGAACATGCACTGGAACTGGCTAATGATAGTGAGTTCGGCCTTTCAGCGACCATTTTTACCACTGACGAAACACAGGCCAGACAGATGGCGGCACGTCTGGAATGCGGTGGGGTGTTTATCAATGGTTATTGTGCCAGCGACGCGCGAGTGGCCTTTGGTGGCGTGAAAAAGAGTGGCTTTGGTCGTGAGCTTTCCCATTTCGGCTTACACGAATTCTGTAATATCCAGACGGTGTGGAAAGACCGGATCTGA", + "dna_sequence_length": 1389, + "functions": [ + "succinate semialdehyde dehydrogenase, NAD(P)+-dependent" + ], + "id": "CDS_1511", + "location": [ + [ + "NC_000913", + 1614703, + "-", + 1389 + ] + ], + "md5": "556398b64509f68122b42512844321e4", + "parent_gene": "", + "protein_md5": "9a7c1fdf9e834ccf08e26c757886bbb4", + "protein_translation": "MTITPATHAISINPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAEKLRDIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITIAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRI", + "protein_translation_length": 462, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005096" + ], + [ + "gene_synonym", + "ECK1519" + ], + [ + "gene_synonym", + "EcoGene:EG13818" + ], + [ + "gene_synonym", + "GI:16129485" + ], + [ + "gene_synonym", + "GeneID:946079" + ], + [ + "gene_synonym", + "JW1519" + ], + [ + "gene_synonym", + "NP_416043.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77309" + ], + [ + "gene_synonym", + "b1526" + ], + [ + "gene_synonym", + "yneJ" + ] + ], + "dna_sequence": "ATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTACGTCTCTCTCCTGCCGGGCATAACTTTTTACGCTATAGCCAACAAATTCTCGCGTTAGTGGATGAAGCGCGGAGCGTTGTCGCTGGCGATGAGCCGCAAGGTTTATTTTCTCTTGGTTCGCTGGAAAGCACCGCTGCAGTGCGCATTCCAGCCACGCTGGCGGAATTCAACCGTCGTTATCCCAAAATTCAGTTTTCACTTTCCACCGGCCCTTCCGGCACTATGCTGGATGGTGTACTGGAGGGAAAACTGAATGCGGCGTTTATTGATGGACCCATTAACCATACTGCCATCGACGGGATACCGGTATACCGCGAGGAACTGATGATCGTCACGCCACAAGGATATGCGCCAGTAACCCGTGCCAGTCAGGTTAATGGCAGTAACATTTATGCCTTCCGCGCCAATTGTTCGTATCGTCGCCACTTCGAGAGCTGGTTTCATGCTGACGGTGCCGCTCCGGGAACTATCCATGAGATGGAGTCTTATCACGGAATGTTGGCCTGTGTGATCGCAGGAGCAGGCATTGCGCTTATTCCGCGCTCTATGCTGGAAAGTATGCCGGGGCATCACCAGGTTGAAGCGTGGCCGTTAGCTGAGCAATGGCGTTGGTTAACAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGA", + "dna_sequence_length": 882, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1512", + "location": [ + [ + "NC_000913", + 1614804, + "+", + 882 + ] + ], + "md5": "be320d03cdb608a93c6453145916db62", + "parent_gene": "", + "protein_md5": "52ed9bd70ee7a8206fa3a397f5a745bf", + "protein_translation": "MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005100" + ], + [ + "gene_synonym", + "ECK1520" + ], + [ + "gene_synonym", + "EcoGene:EG13819" + ], + [ + "gene_synonym", + "GI:16129486" + ], + [ + "gene_synonym", + "GeneID:946080" + ], + [ + "gene_synonym", + "JW1520" + ], + [ + "gene_synonym", + "NP_416044.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76150" + ], + [ + "gene_synonym", + "b1527" + ], + [ + "gene_synonym", + "yneK" + ] + ], + "dna_sequence": "ATGGTTACGCCAGTAAGCATCAGCAATTACATATCTCTTCCTGATGATTTTCCCGTACGTAATATTGCACCGCAGGTAAAAGAAGTTTTAAAGGATTTTATTGATGCACTTAGTACAATAATATGTAATGAAGAGTGGCGCACGTCTTTAAACATCAACTCAGCCACAAAAAAGATATTTAATAACCTTGACAACTTATCATATATTCAGAGGACTTCTTTTCGGGGTAACGACACGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTGCGCTCCCAACCCAAAGCCTGTCACTATGGGGCGCGTATTTCAGACCGGCGTCGAGCGTGTACTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGATCAACCCTGGTGTTCCCATCAAAAGAGCGCATACACCACATATTGAACCCCTGCCTTCGGATCACCATACCGCTGCAGATTACTTACGCCAGTTTGATTTGCTTGTCCTGAATTTTATCTCTCGCGGTAATTTTGTCATACTCCCCCGATTATGGAATAACTCTGAGGTTCACAGATGGTTCGTCAATAAAGATCCTAACTTGATCACCGCCATTCTCGACATAACGGACAGCGAATTAAAAGAGGATTTGTTGCAAAGCCTGATGGATTCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTGAATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAAGTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAA", + "dna_sequence_length": 1116, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1513", + "location": [ + [ + "NC_000913", + 1615763, + "+", + 1116 + ] + ], + "md5": "c5e76c7614c8e80bf4b80e1e697bd426", + "parent_gene": "", + "protein_md5": "4c30f9422e0be324a54cb370e7be15a0", + "protein_translation": "MVTPVSISNYISLPDDFPVRNIAPQVKEVLKDFIDALSTIICNEEWRTSLNINSATKKIFNNLDNLSYIQRTSFRGNDTLYNEKVQFKLTYPARNGRHKENIEFQVVINLSPIYLDNFRHDGEINIFCAPNPKPVTMGRVFQTGVERVLFLFLNDFIEQFPMINPGVPIKRAHTPHIEPLPSDHHTAADYLRQFDLLVLNFISRGNFVILPRLWNNSEVHRWFVNKDPNLITAILDITDSELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQNLFLFFANMLLHYHQFMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATAKTPDLPERH", + "protein_translation_length": 371, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005103" + ], + [ + "gene_synonym", + "ECK1521" + ], + [ + "gene_synonym", + "EcoGene:EG11636" + ], + [ + "gene_synonym", + "GI:16129487" + ], + [ + "gene_synonym", + "GeneID:947218" + ], + [ + "gene_synonym", + "JW1521" + ], + [ + "gene_synonym", + "NP_416045.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31122" + ], + [ + "gene_synonym", + "b1528" + ], + [ + "gene_synonym", + "sotB" + ], + [ + "gene_synonym", + "ydeA" + ] + ], + "dna_sequence": "ATGACAACAAACACTGTTTCCCGCAAAGTGGCGTGGCTACGGGTCGTTACGCTGGCAGTCGCCGCCTTCATCTTCAACACCACCGAATTTGTCCCTGTTGGCCTGCTCTCTGACATTGCGCAAAGTTTTCACATGCAAACCGCTCAGGTCGGCATCATGTTGACCATTTACGCATGGGTAGTAGCGCTAATGTCATTGCCTTTTATGTTAATGACCAGTCAGGTTGAACGGCGCAAATTACTGATCTGCCTGTTTGTGGTGTTTATTGCCAGCCACGTACTGTCGTTTTTGTCGTGGAGCTTTACCGTTCTGGTGATCAGTCGCATTGGTGTGGCTTTTGCACATGCGATTTTCTGGTCGATTACGGCGTCTCTGGCGATCCGTATGGCTCCGGCCGGGAAGCGAGCACAGGCATTGAGTTTAATTGCCACCGGTACAGCACTGGCGATGGTCTTAGGTTTACCTCTCGGGCGCATTGTGGGCCAGTATTTCGGTTGGCGAATGACCTTCTTCGCGATTGGTATTGGGGCGCTTATCACCCTTTTGTGCCTGATTAAGTTACTTCCCTTACTGCCCAGTGAGCATTCCGGTTCACTGAAAAGCCTCCCGCTATTGTTCCGCCGCCCGGCATTGATGAGCATTTATTTGTTAACTGTGGTGGTTGTCACCGCCCATTACACGGCATACAGCTATATCGAGCCTTTTGTACAAAACATTGCGGGATTCAGCGCCAACTTTGCCACGGCATTACTGTTATTACTCGGTGGTGCGGGCATTATTGGCAGCGTGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTGGTAGGTAATCAGGTGAGTTTGCACTGGTCAATGTCGATGATTGGTTATGTGGGCGCGGTGCCTGCTTTTGCCGCGTTAATTTGGTCAATCATTATATTTCGCCGCTGGCCAGTGACACTCGAAGAACAGACGCAATAG", + "dna_sequence_length": 1191, + "functions": [ + "arabinose efflux transporter, arabinose-inducible" + ], + "id": "CDS_1514", + "location": [ + [ + "NC_000913", + 1617028, + "+", + 1191 + ] + ], + "md5": "7a557a2c60f05184bf02ccc5c7c17318", + "parent_gene": "", + "protein_md5": "97dcfd639ba3467d1eca5597a9519d83", + "protein_translation": "MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLEEQTQ", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005106" + ], + [ + "gene_synonym", + "ECK1522" + ], + [ + "gene_synonym", + "EcoGene:EG11637" + ], + [ + "gene_synonym", + "GI:16129488" + ], + [ + "gene_synonym", + "GeneID:947132" + ], + [ + "gene_synonym", + "JW1522" + ], + [ + "gene_synonym", + "NP_416046.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEY1" + ], + [ + "gene_synonym", + "b1529" + ], + [ + "gene_synonym", + "marC" + ], + [ + "gene_synonym", + "ydeB" + ], + [ + "gene_synonym", + "ydeC" + ] + ], + "dna_sequence": "ATGTTAGATTTGTTTAAAGCAATTGGCCTGGGGCTGGTGGTGTTGCTGCCGTTAGCTAACCCATTAACAACTGTCGCGTTATTTCTTGGCCTGGCAGGCAACATGAACAGTGCCGAACGTAATCGTCAGTCGTTGATGGCCTCGGTGTACGTATTTGCCATCATGATGGTGGCGTATTACGCCGGGCAACTGGTGATGGATACATTTGGCATTTCGATTCCCGGTCTGCGAATTGCAGGCGGCTTAATCGTCGCGTTTATCGGTTTTCGGATGCTCTTTCCGCAACAGAAAGCGATTGATTCACCGGAGGCGAAAAGCAAGTCGGAAGAGCTGGAAGATGAACCCAGTGCCAATATTGCCTTTGTGCCGCTGGCAATGCCAAGTACTGCCGGTCCGGGAACCATAGCGATGATTATTAGCTCGGCGTCCACAGTGCGTCAGAGTTCAACCTTCGCTGATTGGGTACTGATGGTTGCGCCGCCGCTGATCTTTTTCCTGGTGGCGGTTATTTTGTGGGGAAGCCTACGCAGCTCCGGCGCAATTATGCGGCTGGTGGGCAAGGGTGGCATTGAAGCGATCTCCCGTCTGATGGGATTCCTGCTGGTATGTATGGGTGTGCAGTTTATTATTAACGGCATCCTGGAAATCATTAAAACGTACCATTAA", + "dna_sequence_length": 666, + "functions": [ + "UPF0056 family inner membrane protein" + ], + "id": "CDS_1515", + "location": [ + [ + "NC_000913", + 1618908, + "-", + 666 + ] + ], + "md5": "74e3c3ed2ca2e45ecee0f549c6b2222c", + "parent_gene": "", + "protein_md5": "35b1c7934308c66f9597dc4890ca4134", + "protein_translation": "MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005110" + ], + [ + "gene_synonym", + "ECK1523" + ], + [ + "gene_synonym", + "EcoGene:EG11435" + ], + [ + "gene_synonym", + "GI:90111289" + ], + [ + "gene_synonym", + "GeneID:945825" + ], + [ + "gene_synonym", + "JW5248" + ], + [ + "gene_synonym", + "NP_416047.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27245" + ], + [ + "gene_synonym", + "b1530" + ], + [ + "gene_synonym", + "cfxB" + ], + [ + "gene_synonym", + "inaR" + ], + [ + "gene_synonym", + "marR" + ], + [ + "gene_synonym", + "soxQ" + ] + ], + "dna_sequence": "GTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAA", + "dna_sequence_length": 435, + "functions": [ + "transcriptional repressor of multiple antibiotic resistance" + ], + "id": "CDS_1516", + "location": [ + [ + "NC_000913", + 1619120, + "+", + 435 + ] + ], + "md5": "26ec616c07b6d2cdada49c4f1ebcff8e", + "parent_gene": "", + "protein_md5": "cad395e3116df1c3d268532f0e9da79b", + "protein_translation": "MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKVLP", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005112" + ], + [ + "gene_synonym", + "ECK1524" + ], + [ + "gene_synonym", + "EcoGene:EG11434" + ], + [ + "gene_synonym", + "GI:90111290" + ], + [ + "gene_synonym", + "GeneID:947613" + ], + [ + "gene_synonym", + "JW5249" + ], + [ + "gene_synonym", + "NP_416048.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACH5" + ], + [ + "gene_synonym", + "b1531" + ], + [ + "gene_synonym", + "cfxB" + ], + [ + "gene_synonym", + "inaR" + ], + [ + "gene_synonym", + "marA" + ], + [ + "gene_synonym", + "nfxC" + ], + [ + "gene_synonym", + "norB" + ], + [ + "gene_synonym", + "soxQ" + ] + ], + "dna_sequence": "ATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGCCGTAAGATGACGGAAATCGCGCAAAAGCTGAAGGAAAGTAACGAGCCGATACTCTATCTGGCAGAACGATATGGCTTCGAGTCGCAACAAACTCTGACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAG", + "dna_sequence_length": 384, + "functions": [ + "multiple antibiotic resistance transcriptional regulator" + ], + "id": "CDS_1517", + "location": [ + [ + "NC_000913", + 1619574, + "+", + 384 + ] + ], + "md5": "d4be510a166d98be296501d35ae7d2f6", + "parent_gene": "", + "protein_md5": "df3a48ee6cec33ee2e1d9770bc0ac91f", + "protein_translation": "MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPLNHYNS", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005114" + ], + [ + "gene_synonym", + "ECK1525" + ], + [ + "gene_synonym", + "EcoGene:EG11599" + ], + [ + "gene_synonym", + "GI:16129491" + ], + [ + "gene_synonym", + "GeneID:946184" + ], + [ + "gene_synonym", + "JW1525" + ], + [ + "gene_synonym", + "NP_416049.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31121" + ], + [ + "gene_synonym", + "b1532" + ], + [ + "gene_synonym", + "marB" + ] + ], + "dna_sequence": "ATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTCCGCGCAGGGCGTTGCGGAACAAACCACGCAGCCAGTTGTTACTTCTTGTGCCAATGTCGTGGTTGTTCCCCCATCGCAGGAACACCCACCGTTTGATTTAAATCACATGGGTACTGGCAGTGATAAGTCGGATGCGCTCGGCGTGCCCTATTATAATCAACACGCTATGTAG", + "dna_sequence_length": 219, + "functions": [ + "periplasmic mar operon regulator" + ], + "id": "CDS_1518", + "location": [ + [ + "NC_000913", + 1619989, + "+", + 219 + ] + ], + "md5": "8d1293ef8a8d4ca3e5bfc8e3bfe0c2f0", + "parent_gene": "", + "protein_md5": "bf83c4375b5b050103db9a8628dcecd1", + "protein_translation": "MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEHPPFDLNHMGTGSDKSDALGVPYYNQHAM", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005116" + ], + [ + "gene_synonym", + "ECK1526" + ], + [ + "gene_synonym", + "EcoGene:EG11639" + ], + [ + "gene_synonym", + "GI:90111291" + ], + [ + "gene_synonym", + "GeneID:946081" + ], + [ + "gene_synonym", + "JW5250" + ], + [ + "gene_synonym", + "NP_416050.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31125" + ], + [ + "gene_synonym", + "b1533" + ], + [ + "gene_synonym", + "eamA" + ], + [ + "gene_synonym", + "ydeD" + ] + ], + "dna_sequence": "ATGTCGCGAAAAGATGGGGTGTTGGCGCTACTGGTAGTGGTCGTATGGGGGCTAAATTTTGTGGTCATCAAAGTGGGGCTTCATAACATGCCACCGCTGATGCTGGCCGGTTTGCGCTTTATGCTGGTCGCTTTTCCGGCTATCTTTTTTGTCGCACGACCGAAAGTACCACTGAATTTGCTGCTGGGGTATGGATTAACCATCAGTTTTGCGCAGTTTGCTTTTCTTTTTTGTGCCATTAACTTCGGTATGCCTGCTGGACTGGCTTCGCTGGTGTTACAGGCACAGGCGTTTTTTACTATCATGCTTGGCGCGTTTACTTTCGGGGAGCGACTGCATGGCAAACAATTGGCGGGGATCGCCTTAGCGATTTTTGGCGTACTGGTGTTAATCGAAGATAGTCTGAACGGTCAGCATGTGGCGATGCTCGGCTTTATGTTGACCCTGGCGGCAGCATTTAGTTGGGCGTGTGGCAACATCTTCAATAAAAAGATCATGTCGCACTCAACGCGTCCGGCGGTGATGTCGCTGGTAATCTGGAGCGCTTTAATCCCAATCATTCCCTTCTTTGTTGCCTCGCTGATTCTCGATGGTTCCGCAACCATGATTCACAGTCTGGTTACTATCGATATGACCACCATCTTGTCTCTGATGTATCTGGCGTTTGTGGCGACAATTGTTGGTTATGGGATCTGGGGGACGTTACTGGGACGCTATGAAACCTGGCGGGTTGCACCGTTATCGTTACTGGTGCCCGTAGTAGGACTGGCAAGTGCGGCACTATTGTTGGATGAACGCTTAACGGGTCTGCAATTTTTAGGTGCGGTGCTCATTATGACCGGGCTGTATATCAATGTATTTGGCTTGCGGTGGCGTAAAGCGGTAAAGGTGGGAAGTTAA", + "dna_sequence_length": 900, + "functions": [ + "cysteine and O-acetyl-L-serine efflux system" + ], + "id": "CDS_1519", + "location": [ + [ + "NC_000913", + 1621137, + "-", + 900 + ] + ], + "md5": "55955c4dab504c46f8471f7c0862d0fb", + "parent_gene": "", + "protein_md5": "79b628347d36b8533213c5a280fc5762", + "protein_translation": "MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005121" + ], + [ + "gene_synonym", + "ECK1527" + ], + [ + "gene_synonym", + "EcoGene:EG11640" + ], + [ + "gene_synonym", + "GI:16129493" + ], + [ + "gene_synonym", + "GeneID:946083" + ], + [ + "gene_synonym", + "JW1527" + ], + [ + "gene_synonym", + "NP_416051.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31126" + ], + [ + "gene_synonym", + "b1534" + ], + [ + "gene_synonym", + "ydeE" + ], + [ + "gene_synonym", + "ydeF" + ] + ], + "dna_sequence": "ATGAACTTATCCCTACGACGCTCTACCAGCGCCCTTCTTGCCTCGTCGTTGTTATTAACCATCGGACGCGGCGCTACGCTGCCATTTATGACCATTTACTTGAGTCGCCAGTACAGCCTGAGTGTCGATCTAATCGGTTATGCGATGACAATTGCGCTCACTATTGGCGTCGTTTTTAGCCTCGGTTTTGGTATCCTGGCGGATAAGTTCGACAAGAAACGCTATATGTTACTGGCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTGCTCTGGTTTTCTGGCTTCTTTTGTAAGCGGCGCATTTGCTTCATGCATTTCACAATATGTGATGGTGATTGCTGATGGGGATTTTGCCGAAAAGGTGGTCGCGGTTGTTCTTCCGGTGAATGCTGCCATGGTGGTTACGTTGCAATATTCCGTGGGCCGCCGACTTAACCCGGCTAACATCCGCGCGCTGATGACAGCAGGCACCCTCTGTTTCGTCATCGGTCTGGTCGGTTTTATTTTTTCCGGCAACAGCCTGCTATTGTGGGGTATGTCAGCTGCGGTATTTACTGTCGGTGAAATCATTTATGCGCCGGGCGAGTATATGTTGATTGACCATATTGCGCCGCCAGAAATGAAAGCCAGCTATTTTTCCGCCCAGTCTTTAGGCTGGCTTGGTGCCGCGATTAACCCATTAGTGAGTGGCGTAGTGCTAACCAGCCTGCCGCCTTCCTCGCTGTTTGTCATCTTAGCGTTGGTGATCATTGCTGCGTGGGTGCTGATGTTAAAAGGGATTCGAGCAAGACCGTGGGGGCAGCCCGCGCTTTGTTGA", + "dna_sequence_length": 1188, + "functions": [ + "putative transporter" + ], + "id": "CDS_1520", + "location": [ + [ + "NC_000913", + 1621332, + "+", + 1188 + ] + ], + "md5": "8da1e02e4378b39c1ab96009545e05ef", + "parent_gene": "", + "protein_md5": "8d38941687f8b77143dbdc47bdb92745", + "protein_translation": "MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAITLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDFAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPEMKASYFSAQSLGWLGAAINPLVSGVVLTSLPPSSLFVILALVIIAAWVLMLKGIRARPWGQPALC", + "protein_translation_length": 395, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4409" + ], + [ + "gene_synonym", + "EcoGene:EG14395" + ], + [ + "gene_synonym", + "GI:145698263" + ], + [ + "gene_synonym", + "GeneID:5061497" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A616" + ], + [ + "gene_synonym", + "YP_001165319.1" + ], + [ + "gene_synonym", + "b4599" + ], + [ + "gene_synonym", + "yneM" + ] + ], + "dna_sequence": "ATGCTGGGTAATATGAATGTTTTTATGGCCGTACTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAA", + "dna_sequence_length": 96, + "functions": [ + "inner membrane-associated protein" + ], + "id": "CDS_1521", + "location": [ + [ + "NC_000913", + 1622646, + "+", + 96 + ] + ], + "md5": "645e37325a8515d0e963cba7c41d33c8", + "parent_gene": "", + "protein_md5": "45194fb9a5e7b56a3187457fd9b976bb", + "protein_translation": "MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD", + "protein_translation_length": 31, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005123" + ], + [ + "gene_synonym", + "ECK1528" + ], + [ + "gene_synonym", + "EcoGene:EG11643" + ], + [ + "gene_synonym", + "GI:16129494" + ], + [ + "gene_synonym", + "GeneID:946075" + ], + [ + "gene_synonym", + "JW1528" + ], + [ + "gene_synonym", + "NP_416052.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31129" + ], + [ + "gene_synonym", + "b1535" + ], + [ + "gene_synonym", + "dgcZ" + ], + [ + "gene_synonym", + "ydeG" + ], + [ + "gene_synonym", + "ydeH" + ] + ], + "dna_sequence": "ATGATCAAGAAGACAACGGAAATTGATGCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGTGGTCGCGAGAGATGCCAGTAAGCCAGAAATAACGGATAACCATTCTTATGGACTGTGCCAGTTTGGTCGGTGGATTGATCATCTGGGGCCACTCGATAACGATGAATTACCTTACGTTCGGCTAATGGATTCTGCCCATCAACATATGCATAACTGTGGTCGGGAATTAATGCTGGCTATTGTTGAAAATCACTGGCAGGACGCGCATTTCGACGCCTTTCAGGAGGGGTTGCTTTCTTTTACTGCGGCATTAACCGATTACAAAATTTATTTGCTGACGATCCGTAGCAATATGGATGTTTTGACGGGATTGCCGGGTCGTCGGGTTCTTGATGAATCCTTTGATCATCAGTTACGCAACGCTGAGCCTCTGAATCTTTATTTAATGTTGTTGGATATTGACCGATTTAAATTGGTTAATGATACCTACGGGCATTTAATCGGCGATGTAGTATTACGCACCCTGGCAACTTACTTAGCCAGTTGGACGCGTGATTACGAAACGGTTTATCGCTACGGGGGCGAAGAATTTATCATTATTGTCAAAGCGGCTAATGATGAAGAAGCATGTCGTGCAGGTGTCAGAATTTGCCAGTTAGTCGATAACCATGCCATCACACATTCTGAAGGGCATATCAACATTACCGTGACAGCAGGTGTGAGTCGCGCATTTCCTGAAGAGCCTCTGGATGTGGTCATTGGAAGAGCGGACCGGGCAATGTATGAGGGTAAGCAAACCGGAAGAAATCGCTGCATGTTTATTGACGAACAAAATGTGATTAACCGAGTTTAA", + "dna_sequence_length": 891, + "functions": [ + "diguanylate cyclase, zinc-sensing" + ], + "id": "CDS_1522", + "location": [ + [ + "NC_000913", + 1623850, + "-", + 891 + ] + ], + "md5": "3496e7a4f6d152ef71f7ccb452dd5a79", + "parent_gene": "", + "protein_md5": "7c35f953fbd5e02085ca5a182ddbfcf0", + "protein_translation": "MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005127" + ], + [ + "gene_synonym", + "ECK1529" + ], + [ + "gene_synonym", + "EcoGene:EG11644" + ], + [ + "gene_synonym", + "GI:16129495" + ], + [ + "gene_synonym", + "GeneID:946068" + ], + [ + "gene_synonym", + "JW1529" + ], + [ + "gene_synonym", + "NP_416054.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31130" + ], + [ + "gene_synonym", + "b1536" + ], + [ + "gene_synonym", + "ydeI" + ] + ], + "dna_sequence": "ATGAAATTTCAGGCCATTGTATTAGCAAGTTTTCTTGTCATGCCTTATGCGTTGGCAGATGACCAGGGCGGTTTAAAACAGGATGCAGCGCCACCGCCGCCTCATGCAATAGAAGATGGCTATCGCGGAACCGATGATGCAAAAAAAATGACCGTTGATTTCGCAAAAACCATGCACGATGGCGCTTCGGTTTCACTACGCGGTAATTTGATTTCTCACAAAGGAGAGGACCGTTACGTTTTTCGCGATAAGAGCGGTGAAATTAATGTCGTTATTCCTGCGGCCGTCTTTGATGGACGAGAAGTTCAGCCGGACCAGATGATCAACATTAGTGGCAGTCTGGATAAGAAAAGCGCGCCGGCCGTCGTTCGGGTCACTCATTTGCAGAAATAA", + "dna_sequence_length": 393, + "functions": [ + "hydrogen peroxide resistance OB fold protein", + "putative periplasmic protein" + ], + "id": "CDS_1523", + "location": [ + [ + "NC_000913", + 1624497, + "-", + 393 + ] + ], + "md5": "49231f0a008f2664c460f81fd0d5791c", + "parent_gene": "", + "protein_md5": "284b226642be9589cc326bc25d089e6a", + "protein_translation": "MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAPAVVRVTHLQK", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005131" + ], + [ + "gene_synonym", + "ECK1530" + ], + [ + "gene_synonym", + "EcoGene:EG11645" + ], + [ + "gene_synonym", + "GI:16129496" + ], + [ + "gene_synonym", + "GeneID:946067" + ], + [ + "gene_synonym", + "JW1530" + ], + [ + "gene_synonym", + "NP_416055.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31131" + ], + [ + "gene_synonym", + "b1537" + ], + [ + "gene_synonym", + "ydeJ" + ] + ], + "dna_sequence": "GTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAACTACCGCCGAATCATGCACCGGCGGTAAGTTGGCTAGCGCCCTGTGTGCAGCTGAAGATACACCCAAATTTTACGGTGCAGGCTTTGTTACTTTCACCGATCAGGCAAAGATGAAAATCCTCAGCGTAAGCCAGCAATCTCTTGAACGATATTCTGCGGTGAGTGAGAAAGTGGCAGCAGAAATGGCAACCGGTGCCATAGAGCGTGCGGATGCTGATGTCAGTATTGCCATTACCGGCTACGGCGGACCGGAGGGCGGTGAAGATGGTACGCCAGCGGGTACCGTCTGGTTTGCGTGGCATATTAAAGGCCAGAACTACACTGCGGTTATGCATTTTGCTGGCGACTGCGAAACGGTATTAGCTTTAGCGGTGAGGTTTGCCCTCGCCCAGCTGCTGCAATTACTGCTATAA", + "dna_sequence_length": 519, + "functions": [ + "inactive PncC family protein" + ], + "id": "CDS_1524", + "location": [ + [ + "NC_000913", + 1624773, + "+", + 519 + ] + ], + "md5": "0e74dd1896a08443528b55dc84ab6d51", + "parent_gene": "", + "protein_md5": "ada93817b834e45a9dda42ede4b6dd8a", + "protein_translation": "MNINRDKIVQLVDTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAVRFALAQLLQLLL", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005133" + ], + [ + "gene_synonym", + "ECK1531" + ], + [ + "gene_synonym", + "EcoGene:EG10212" + ], + [ + "gene_synonym", + "GI:16129497" + ], + [ + "gene_synonym", + "GeneID:946084" + ], + [ + "gene_synonym", + "JW1531" + ], + [ + "gene_synonym", + "NP_416056.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24171" + ], + [ + "gene_synonym", + "b1538" + ], + [ + "gene_synonym", + "dcp" + ] + ], + "dna_sequence": "ATGACAACAATGAATCCTTTCCTTGTGCAAAGCACACTGCCGTATCTGGCTCCCCATTTTGATCAAATTGCCAATCATCACTATCGCCCGGCATTCGATGAGGGAATGCAGCAAAAGCGGGCAGAAATTGCTGCCATCGCGCTTAACCCGCAAATGCCTGATTTCAACAATACTATTCTGGCACTGGAACAAAGCGGAGAATTACTTACCCGCGTTACCAGCGTCTTTTTTGCGATGACTGCGGCGCATACCAATGATGAATTACAGCGTCTTGACGAGCAGTTTTCCGCTGAACTGGCGGAACTGGCTAATGATATCTATCTGAACGGTGAATTATTCGCGCGGGTAGATGCTGTCTGGCAGCGCCGTGAATCCCTGGGGCTTGATAGTGAATCCATCCGCCTGGTGGAGGTGATTCATCAACGTTTTGTCCTTGCCGGAGCCAAACTTGCGCAAGCTGATAAAGCAAAATTAAAAGTACTGAATACAGAAGCTGCGACCCTGACCAGCCAGTTTAACCAGCGATTACTGGCAGCAAATAAATCCGGCGGTCTGGTTGTGAACGATATCGCGCAGCTGGCAGGAATGAGTGAGCAAGAGATTGCGCTGGCGGCAGAGGCGGCTCGCGAGAAAGGTCTGGATAACAAATGGCTGATTCCGCTGCTGAATACCACCCAACAACCGGCGCTTGCCGAAATGCGCGATCGTGCGACGCGTGAAAAACTGTTTATTGCGGGCTGGACGCGAGCGGAAAAAAATGATGCCAATGATACCCGCGCTATCATTCAACGTCTGGTGGAGATCCGTGCACAACAGGCAACACTACTTGGTTTTCCTCATTATGCCGCATGGAAAATCGCCGATCAGATGGCAAAAACACCTGAAGCAGCACTTAACTTTATGCGGGAAATTGTTCCAGCGGCGCGTCAACGTGCGAGCGATGAATTAGCCTCCATACAGGCGGTTATCGATAAGCAGCAGGGCGGGTTTAGCGCGCAGCCGTGGGACTGGGCATTTTATGCGGAACAGGTACGGCGGGAGAAATTTGATCTTGATGAGGCGCAGCTCAAGCCATATTTTGAATTAAACACGGTGTTAAATGAAGGTGTATTCTGGACCGCGAATCAGCTCTTCGGTATTAAGTTTGTCGAACGTTTTGATATTCCTGTCTACCATCCTGACGTTCGTGTGTGGGAAATTTTTGATCATAATGGCGTGGGGCTGGCGTTATTTTACGGTGATTTCTTCGCCCGTGATTCAAAAAGCGGCGGTGCATGGATGGGCAATTTTGTTGAGCAATCAACGCTTAATAAAACACATCCGGTAATTTATAACGTCTGCAATTATCAGAAACCCGCTGCCGGTGAGCCTGCGTTGTTACTCTGGGATGATGTCATAACCTTATTCCATGAATTTGGTCATACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGCAACGCATCCGCAGGTATTCGCTCGCTACGCCCGGCATTATCAGAGCGGGGCAGCAATGCCTGACGAACTGCAACAGAAAATGCGTAATGCCAGCCTGTTCAACAAAGGGTATGAGATGAGCGAACTGCTTAGCGCCGCACTTCTCGATATGCGCTGGCATTGCCTGGAAGAAAACGAAGCAATGCAGGATGTCGATGATTTTGAATTGCGGGCGCTGGTGGCGGAAAATATGGATCTTCCTGCTATACCGCCACGCTATCGCAGCAGTTATTTCGCCCATATTTTTGGTGGCGGATATGCTGCAGGTTATTACGCTTATCTGTGGACGCAAATGTTGGCCGATGATGGTTATCAGTGGTTTGTTGAGCAGGGCGGATTAACGCGTGAAAATGGGCTGCGTTTTCGCGAGGCGATCCTTTCCAGAGGTAACAGCGAAGATCTGGAACGCCTGTATCGACAATGGCGCGGTAAGGCACCTAAGATTATGCCGATGCTGCAACATCGTGGCTTGAACATATAA", + "dna_sequence_length": 2046, + "functions": [ + "dipeptidyl carboxypeptidase II" + ], + "id": "CDS_1525", + "location": [ + [ + "NC_000913", + 1627380, + "-", + 2046 + ] + ], + "md5": "49e4985b2eed5c7a7418ab395be901ed", + "parent_gene": "", + "protein_md5": "2cf69a4dd912f02f130d4313ca35a9d3", + "protein_translation": "MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIAAIALNPQMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGLRFREAILSRGNSEDLERLYRQWRGKAPKIMPMLQHRGLNI", + "protein_translation_length": 681, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005137" + ], + [ + "gene_synonym", + "ECK1532" + ], + [ + "gene_synonym", + "EcoGene:EG12345" + ], + [ + "gene_synonym", + "GI:16129498" + ], + [ + "gene_synonym", + "GeneID:946085" + ], + [ + "gene_synonym", + "JW1532" + ], + [ + "gene_synonym", + "NP_416057.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39831" + ], + [ + "gene_synonym", + "b1539" + ], + [ + "gene_synonym", + "ydfG" + ] + ], + "dna_sequence": "ATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAACGGTTGCAGGAGTTAAAAGACGAACTGGGAGATAATCTGTATATCGCCCAACTGGACGTTCGCAACCGCGCCGCTATTGAAGAGATGCTGGCATCGCTTCCTGCCGAGTGGTGCAATATTGATATCCTGGTAAATAATGCCGGCCTGGCGTTGGGCATGGAGCCTGCGCATAAAGCCAGCGTTGAAGACTGGGAAACGATGATTGATACCAACAACAAAGGCCTGGTATATATGACGCGCGCCGTCTTACCGGGTATGGTTGAACGTAATCATGGTCATATTATTAACATTGGCTCAACGGCAGGTAGCTGGCCGTATGCCGGTGGTAACGTTTACGGTGCGACGAAAGCGTTTGTTCGTCAGTTTAGCCTGAATCTGCGTACGGATCTGCATGGTACGGCGGTGCGCGTCACCGACATCGAACCGGGTCTGGTGGGTGGTACCGAGTTTTCCAATGTCCGCTTTAAAGGCGATGACGGTAAAGCAGAAAAAACCTATCAAAATACCGTTGCATTGACGCCAGAAGATGTCAGCGAAGCCGTCTGGTGGGTGTCAACGCTGCCTGCTCACGTCAATATCAATACCCTGGAAATGATGCCGGTTACCCAAAGCTATGCCGGACTGAATGTCCACCGTCAGTAA", + "dna_sequence_length": 747, + "functions": [ + "NADP-dependent 3-hydroxy acid dehydrogenase", + "malonic semialdehyde reductase" + ], + "id": "CDS_1526", + "location": [ + [ + "NC_000913", + 1627517, + "+", + 747 + ] + ], + "md5": "1b863a7ba8f18d7ac9078b39ff91321e", + "parent_gene": "", + "protein_md5": "01c0a4d391cd4222f59c2cb2c5b1bea8", + "protein_translation": "MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005144" + ], + [ + "gene_synonym", + "ECK1533" + ], + [ + "gene_synonym", + "EcoGene:EG13820" + ], + [ + "gene_synonym", + "GI:16129499" + ], + [ + "gene_synonym", + "GeneID:946087" + ], + [ + "gene_synonym", + "JW1533" + ], + [ + "gene_synonym", + "NP_416058.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACM2" + ], + [ + "gene_synonym", + "b1540" + ], + [ + "gene_synonym", + "rspR" + ], + [ + "gene_synonym", + "ydfH" + ] + ], + "dna_sequence": "ATGACCGTCGAAACGCAACTTAATCCCACACAGCCTGTCAATCAGCAGATTTATCGTATTCTTCGTCGCGACATTGTCCATTGCCTGATTGCTCCAGGCACACCGTTGTCGGAAAAAGAAGTTTCTGTTCGTTTCAATGTGTCACGCCAGCCGGTTCGTGAAGCCTTTATTAAACTGGCGGAAAACGGCCTGATTCAAATTCGTCCGCAACGTGGCAGCTACGTCAACAAAATTTCCATGGCCCAGGTGCGCAACGGCAGTTTTATCCGTCAGGCCATTGAGTGCGCGGTGGCGCGTCGGGCGGCGAGCATGATTACCGAAAGCCAGTGCTATCAACTGGAACAAAATCTTCACCAGCAACGCATTGCCATTGAGCGCAAGCAACTGGATGATTTTTTTGAACTTGATGACAACTTCCATCAACTCCTGACGCAGATTGCCGACTGTCAACTGGCGTGGGATACCATTGAGAACCTGAAAGCGACCGTTGATCGCGTGCGCTATATGAGTTTCGACCACGTTTCTCCACCAGAAATGCTGTTACGCCAGCATCTTGATATTTTCTCTGCCCTGCAAAAACGTGATGGCGATGCGGTAGAACGTGCAATGACGCAACATTTGCAGGAAATCAGCGAATCCGTGCGCCAGATCCGCCAGGAAAACAGCGACTGGTTTAGCGAAGAGTAA", + "dna_sequence_length": 687, + "functions": [ + "transcriptional repressor for rspAB" + ], + "id": "CDS_1527", + "location": [ + [ + "NC_000913", + 1628352, + "+", + 687 + ] + ], + "md5": "348b0b5c06ba69934377c5512bce2c6b", + "parent_gene": "", + "protein_md5": "d8e4d217b3abef1f1d4da4fef71a7ef7", + "protein_translation": "MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005147" + ], + [ + "gene_synonym", + "ECK1534" + ], + [ + "gene_synonym", + "EcoGene:EG13838" + ], + [ + "gene_synonym", + "GI:16129500" + ], + [ + "gene_synonym", + "GeneID:948796" + ], + [ + "gene_synonym", + "JW1534" + ], + [ + "gene_synonym", + "NP_416059.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64463" + ], + [ + "gene_synonym", + "b1541" + ], + [ + "gene_synonym", + "ydfZ" + ] + ], + "dna_sequence": "ATGACGACCTACGATCGTAACCGTAACGCAATCACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAA", + "dna_sequence_length": 204, + "functions": [ + "selenoprotein, function unknown" + ], + "id": "CDS_1528", + "location": [ + [ + "NC_000913", + 1629215, + "+", + 204 + ] + ], + "md5": "a544ecfebe5e5dc1d2d83d3d25a178c8", + "parent_gene": "", + "protein_md5": "38b616c6eef1665d15a0661efb303c4a", + "protein_translation": "MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005149" + ], + [ + "gene_synonym", + "ECK1535" + ], + [ + "gene_synonym", + "EcoGene:EG13821" + ], + [ + "gene_synonym", + "GI:16129501" + ], + [ + "gene_synonym", + "GeneID:945861" + ], + [ + "gene_synonym", + "JW1535" + ], + [ + "gene_synonym", + "NP_416060.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77260" + ], + [ + "gene_synonym", + "b1542" + ], + [ + "gene_synonym", + "ydfI" + ] + ], + "dna_sequence": "ATGGGAAATAATTTGTTATCAGCAAAAGCGACACTCCCTGTTTATGATCTTAATAACCTGGCTCCAAGAATTGTTCATTTAGGCTTTGGTGCATTTCACCGTGCGCATCAGGGTGTGTATGCCGATATTCTTGCTACGGAACATTTCAGTGACTGGGGATATTATGAGGTCAACTTAATCGGCGGCGAACAGCAAATTGCCGATTTACAACAGCAAGATAATCTTTATACCGTTGCGGAAATGTCGGCCGATGTGTGGACGGCTCGCGTCGTTGGCGTCGTTAAAAAAGCCTTGCACGTACAGATAGATGGCTTAGAAACCGTGTTGGCAGCGATGTGTGAACCGCAAATCGCGATTGTCTCTCTGACAATCACCGAAAAAGGGTATTTCCACTCTCCGGCGACCGGACAGTTAATGCTCGATCACCCGATGGTAGCTGCCGACGTGCAAAATCCCCACCAGCCGAAAACAGCAACAGGGGTGATTGTTGAGGCGCTGGCTCGCCGTAAAGCGGCAGGACTTCCCGCATTTACCGTCATGTCATGTGACAACATGCCAGAAAACGGTCATGTTATGCGTGACGTTGTCACTTCCTACGCACAAGCCGTTGATGTAAAACTGGCACAATGGATCGAAGATAACGTGACTTTCCCATCAACAATGGTGGACCGTATTGTGCCCGCAGTGACAGAGGATACGCTGGCGAAAATCGAACAACTTACCGGTGTGCGCGATCCTGCGGGCGTTGCCTGTGAACCTTTCCGCCAGTGGGTAATAGAAGATAACTTTGTTGCCGGACGTCCGGAATGGGAAAAAGCGGGAGCCGAACTGGTTAGCGATGTGCTGCCTTATGAAGAGATGAAGTTGCGCATGCTCAACGGCAGTCATTCATTCCTGGCGTATCTGGGGTATCTTGCAGGATATCAGCACATTAATGACTGTATGGAAGATGAACATTATCGTTATGCGGCGTATGGCTTGATGTTGCAGGAACAAGCGCCGACGTTGAAAGTGCAGGGCGTTGATTTGCAAGATTACGCTAACCGATTAATTGCACGCTATAGCAACCCGGCGTTACGTCATCGAACCTGGCAGATTGCGATGGATGGTAGCCAGAAATTGCCACAGCGGATGTTGGATTCTGTTCGCTGGCATCTGGCGCATGACAGCAAGTTCGATCTGCTGGCGCTGGGCGTCGCGGGTTGGATGCGTTATGTCGGTGGTGTTGATGAACAGGGAAATCCGATAGAAATCAGTGACCCACTGTTACCTGTTATTCAGAAGGCTGTACAAAGTAGTGCCGAAGGGAAAGCGCGCGTCCAGTCATTGCTGGCGATTAAGGCGATCTTTGGTGATGATTTGCCAGACAATAGTTTGTTTACTGCAAGAGTGACGGAAACGTACTTGTCTTTATTAGCGCATGGCGCGAAAGCGACCGTGGCAAAATATTCCGTGAAGTAA", + "dna_sequence_length": 1461, + "functions": [ + "putative NAD-dependent D-mannonate oxidoreductase" + ], + "id": "CDS_1529", + "location": [ + [ + "NC_000913", + 1630913, + "-", + 1461 + ] + ], + "md5": "cff50cda3252f90ed4e0f4c94332c823", + "parent_gene": "", + "protein_md5": "10fabe38d97150b751aaebac33025e13", + "protein_translation": "MGNNLLSAKATLPVYDLNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEMSADVWTARVVGVVKKALHVQIDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAQAVDVKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTARVTETYLSLLAHGAKATVAKYSVK", + "protein_translation_length": 486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005152" + ], + [ + "gene_synonym", + "ASAP:ABE-0285055" + ], + [ + "gene_synonym", + "ECK1536" + ], + [ + "gene_synonym", + "EcoGene:EG13822" + ], + [ + "gene_synonym", + "GeneID:944802" + ], + [ + "gene_synonym", + "JW1536" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77228" + ], + [ + "gene_synonym", + "b4600" + ], + [ + "gene_synonym", + "ydfJ" + ], + [ + "gene_synonym", + "ynfP" + ] + ], + "dna_sequence": "ATGACAATAGAAAAACACGAAAGAAGCACTAAGGATTTGGTGAAAGCAGCAGTATCGGGATGGCTGGGCACTGCGCTTGAATTTATGGATTTCCAGTTATATTCGCTCGGCGCAGCGTTAGTGTTTCATGAAATATTTTTTCCTGAATCATCAACGGCAATGGCGTTAATTCTGGCAATGGGAACCTACGGTGCAGGTTATGTGGCGCGTATTGTCGGAGCATTTATTTTCGGCAAAATGGGCGACAGAATAGGGCGTAAAAAAGTGCTCTTTATTACCATCACCATGATGGGGATCTGTACCACCTTAATTGGTGTGTTACCGACCTATGCACAGATTGGTGTTTTTGCACCCATCTTGCTGGTGACGTTGCGTATTATTCAGGGGTTGGGTGCAGGTGCGGAAATTTCCGGTGCCGGTACGATGCTGGCGGAATATGCGCCAAAAGGTAAGCGCGGAATTATCTCCTCATTTGTGGCTATGGGAACTAACTGCGGAACCTTGAGCGCAACGGCAATCTGGGCCTTTATGTTCTTCATTCTCAGTAAAGAGGAACTGCTGGCGTGGGGATGGCGTATACCGTTCCTGGCGAGTGTTGTCGTGATGGTCTTTGCTATCTGGTTGCGTATGAATCTGAAAGAAAGCCCGGTCTTTGAGAAGGTTAACGACAGTAACCAACCGACAGCAAAACCTGCACCTGCTGGTAGCATGTTCCAGAGCAAATCCTTCTGGCTGGCAACAGGGCTGCGTTTTGGTCAGGCGGGTAACTCCGGGTTAATTCAGACTTTCCTTGCAGGCTATTTAGTGCAGACGTTATTGTTTAACAAAGCAATTCCAACAGATGCATTGATGATCAGTTCGATTCTCGGCTTTATGACCATTCCGTTCCTTGGTTGGTTATCCGATAAAATTGGTCGCCGGATCCCGTATATTATTATGAATACCTCCGCGATTGTGCTGGCATGGCCAATGCTTTCTATCATTGTAGATAAAAGCTATGCCCCGAGCACCATTATGGTTGCACTGATTGTGATTCATAACTGTGCGGTGCTGGGATTATTTGCTCTGGAAAACATTACCATGGCAGAAATGTTCGGCTGTAAAAACCGCTTTACCCGGATGGCTATTTCTAAAGAAATTGGTGGTCTTATCGCTTCCGGTTTTGGTCCTATCCTGGCGGGTATTTTCTGCACCATGACGGAATCCTGGTATCCGATCGCCATTATGATCATGGCATATTCAGTGATTGGTTTAATCTCTGCGCTGAAAATGCCAGAGGTGAAAGACCGTGATTTAAGTGCGCTGGAAGACGCTGCGGAAGATCAACCGCGTGTTGTAAGAGCTGCGCAACCTTCCAGAAGTCTGTAA", + "dna_sequence_length": 1368, + "id": "CDS_1530", + "location": [ + [ + "NC_000913", + 1652838, + "-", + 84 + ], + [ + "NC_000913", + 1632285, + "-", + 1284 + ] + ], + "md5": "16f03ffe7822256eb368a692b17a50cd", + "parent_gene": "", + "protein_md5": "a410e147ca06b1bc8c941b6280cbc307", + "protein_translation": "MTIEKHERSTKDLVKAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQPSRSL", + "protein_translation_length": 455, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005161" + ], + [ + "gene_synonym", + "ECK1537" + ], + [ + "gene_synonym", + "EcoGene:EG13823" + ], + [ + "gene_synonym", + "GI:345452719" + ], + [ + "gene_synonym", + "GeneID:947451" + ], + [ + "gene_synonym", + "JW1537" + ], + [ + "gene_synonym", + "NP_416062.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76154" + ], + [ + "gene_synonym", + "b1544" + ], + [ + "gene_synonym", + "ydfK" + ] + ], + "dna_sequence": "ATGAAATCAAAAGACACCCTAAAGTGGTTCCCTGCGCAGCTTCCTGAAGTAAGAATTATCCTAGGGGATGCTGTAGTGGAAGTAGCAAAACAGGGAAGACCTATCAATACCAGAACATTGCTTGATTACATTGAAGGAAACATAAAGAAAAAATCATGGCTGGATAACAAAGAATTATTACAAACAGCGATATCAGTTCTTAAAGACAACCAAAATTTAAATGGTAAAATGTAA", + "dna_sequence_length": 234, + "functions": [ + "cold shock protein, function unknown, Qin prophage" + ], + "id": "CDS_1531", + "location": [ + [ + "NC_000913", + 1633072, + "+", + 234 + ] + ], + "md5": "976ead483e4cba8ccaa85ec8499080d0", + "parent_gene": "", + "protein_md5": "46715fe43daa0cbd8fc3c820c9995fe1", + "protein_translation": "MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005164" + ], + [ + "gene_synonym", + "ECK1538" + ], + [ + "gene_synonym", + "EcoGene:EG13824" + ], + [ + "gene_synonym", + "GI:16129504" + ], + [ + "gene_synonym", + "GeneID:946088" + ], + [ + "gene_synonym", + "JW1538" + ], + [ + "gene_synonym", + "NP_416063.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77170" + ], + [ + "gene_synonym", + "b1545" + ], + [ + "gene_synonym", + "pinQ" + ], + [ + "gene_synonym", + "ydfL" + ] + ], + "dna_sequence": "ATGTCTCAAATTTTTGCTTACTGTCGGATATCAACGCTGGATCAGACCACCGAAAATCAACGCCGGGAAATCGAAAGTGCAGGTTTTAAAATCAAACCTCAGCAAATAATCGAAGAACACATTAGCGGCTCAGCAGCAACCAGTGAGCGTCCTGGTTTTAACCGGTTGCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATATAA", + "dna_sequence_length": 591, + "functions": [ + "Qin prophage", + "putative site-specific recombinase" + ], + "id": "CDS_1532", + "location": [ + [ + "NC_000913", + 1633622, + "+", + 591 + ] + ], + "md5": "bf236e4614b6478bd31bf84eed814610", + "parent_gene": "", + "protein_md5": "5bfe4bbd45a003a725f7a51a17773030", + "protein_translation": "MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005166" + ], + [ + "gene_synonym", + "ECK1539" + ], + [ + "gene_synonym", + "EcoGene:EG13825" + ], + [ + "gene_synonym", + "GI:16129505" + ], + [ + "gene_synonym", + "GeneID:946060" + ], + [ + "gene_synonym", + "JW1539" + ], + [ + "gene_synonym", + "NP_416064.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76155" + ], + [ + "gene_synonym", + "b1546" + ], + [ + "gene_synonym", + "tfaQ" + ], + [ + "gene_synonym", + "ydfM" + ] + ], + "dna_sequence": "ATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGATGCATATATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTATCGGGTATTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCCAGCACTGCCGTAG", + "dna_sequence_length": 576, + "functions": [ + "Qin prophage", + "putative tail fibre assembly protein" + ], + "id": "CDS_1533", + "location": [ + [ + "NC_000913", + 1634885, + "-", + 576 + ] + ], + "md5": "2d987e4c73388b7dedfc234f9913662b", + "parent_gene": "", + "protein_md5": "4efdaab75d1fcbb284629af2a4b94c94", + "protein_translation": "MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005168" + ], + [ + "gene_synonym", + "ECK1540" + ], + [ + "gene_synonym", + "EcoGene:EG13826" + ], + [ + "gene_synonym", + "GI:16129506" + ], + [ + "gene_synonym", + "GeneID:946098" + ], + [ + "gene_synonym", + "JW1540" + ], + [ + "gene_synonym", + "NP_416065.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77515" + ], + [ + "gene_synonym", + "b1547" + ], + [ + "gene_synonym", + "stfQ" + ], + [ + "gene_synonym", + "ydfN" + ] + ], + "dna_sequence": "GTGAATATAACCGCGCTGACAGACAATACGCAGGGGGCAGCAGGTCTTGAGTTATACGAGGTGTATAACAACGGATATCCAACAGCGTATGGAAATATCATTCACCTGAAAGGGATGACAGCCGTTGGCGAAGGTGAGTTACTCATCGGCTGGAGTGGTACAAGCGGTGCTCATGCTCCGGCATTTATTCGTTCACGACGGGATACGACCGACGCAAACTGGTCGCCGTGGGCGCAGCTTTACACCTCGGCTCATCCTCCTGCAGAGTTTTATCCAGTCGGTGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGACTTTTGACAAATCTGCATACCCGAAACTTGCAGTTGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACGATTAAGGGCAAGCCCGCCAGTGGTCGGGCCGTATTATCTCAGGAACAGGACGGCATTAAATCGCACACCCACAGCGCCAGCGCATCCAGTACGGATTTGGGGACGGAAACCACATCGTCGTTTGATTACGGAACCAAATCCACGAATAACACCGGGGCGCATACCCATAGTATTAGCGGGACCGCAAATAGTGCCGGTGCGCACCAACACAAGAGTTCCGGTGCATTTGGTGGCACGAACACGAGCATTTTCCCTAATGGTTATACCGCGATTTCAAATCTAAGCGCGGGGATTATGAGCACAACAAGCGGTAGTGGCCAGACTCGTAATGCAGGGAAGACATCATCAGATGGTGCTCATACCCACTCGCTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAACTATATTGTGAGGCTTGCATAA", + "dna_sequence_length": 963, + "functions": [ + "Qin prophage", + "putative side tail fibre assembly protein" + ], + "id": "CDS_1534", + "location": [ + [ + "NC_000913", + 1635847, + "-", + 963 + ] + ], + "md5": "8a22e0c137989f4aeb181ed3ebffe973", + "parent_gene": "", + "protein_md5": "9e71b7f79667044f3af8f5fd073ad501", + "protein_translation": "MNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005172" + ], + [ + "gene_synonym", + "ECK1541" + ], + [ + "gene_synonym", + "EcoGene:EG11634" + ], + [ + "gene_synonym", + "GeneID:946021" + ], + [ + "gene_synonym", + "JW1541" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31061" + ], + [ + "gene_synonym", + "b1548" + ], + [ + "gene_synonym", + "nohA" + ], + [ + "gene_synonym", + "nohQ" + ] + ], + "dna_sequence": "ATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGGGAAGTTGAAGAACTGCGGCAGGCCAGCGAGACAGATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGACGCACAGGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATAT", + "dna_sequence_length": 528, + "id": "CDS_1535", + "location": [ + [ + "NC_000913", + 1636367, + "-", + 528 + ] + ], + "md5": "4276c16cf44bcca8d935b1ff3fb91469", + "parent_gene": "", + "protein_md5": "daf5198d16f1564414447c0e7db215ea", + "protein_translation": "MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285054" + ], + [ + "gene_synonym", + "ECK1542" + ], + [ + "gene_synonym", + "EcoGene:EG14422" + ], + [ + "gene_synonym", + "GI:94541112" + ], + [ + "gene_synonym", + "GeneID:1450267" + ], + [ + "gene_synonym", + "JW5251" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EES0" + ], + [ + "gene_synonym", + "YP_588454.1" + ], + [ + "gene_synonym", + "b4533" + ], + [ + "gene_synonym", + "ynfO" + ] + ], + "dna_sequence": "ATGTCAACGAAGAACAGAACCCGCAGAACAACAACCCGCAACATCCGCTTTCCTAACCAAATGATTGAACAAATTAACATCGCTCTTGAGCAAAAAGGGTCCGGGAATTTCTCAGCCTGGGTCATTGAAGCCTGCCGCCGGAGACTGTGCTCAGAAAAAAGAGTTTCTTCTGAAGCAAACAAAGAAAAGAGTGACATTACTGAATTGCTCAGAAAACAGGTCAGACCAGATTGA", + "dna_sequence_length": 234, + "functions": [ + "uncharacterized protein, Qin prophage" + ], + "id": "CDS_1536", + "location": [ + [ + "NC_000913", + 1636756, + "+", + 234 + ] + ], + "md5": "d115120027d7ac81107af340c347c10d", + "parent_gene": "", + "protein_md5": "fc0b303f6224cf10dedb78e3688d9843", + "protein_translation": "MSTKNRTRRTTTRNIRFPNQMIEQINIALEQKGSGNFSAWVIEACRRRLCSEKRVSSEANKEKSDITELLRKQVRPD", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005175" + ], + [ + "gene_synonym", + "ECK1543" + ], + [ + "gene_synonym", + "EcoGene:EG13827" + ], + [ + "gene_synonym", + "GI:90111292" + ], + [ + "gene_synonym", + "GeneID:945992" + ], + [ + "gene_synonym", + "JW5252" + ], + [ + "gene_synonym", + "NP_416067.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76156" + ], + [ + "gene_synonym", + "b1549" + ], + [ + "gene_synonym", + "ydfO" + ] + ], + "dna_sequence": "ATGGATCAGGTAGTCATTTTTAAACAAATATTTGATAAAGTTCGAAACGATTTAAACTATCAATGGTTTTATTCTGAGCTAAAACGTCACAATGTCTCACATTACATTTACTATTTAGCCACAGAGAATGTTCATATTGTATTAAAAAATGATAATACAGTGTTATTAAAGGGCCTAAAAAACATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATCACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCACGAACAAAAAAGATATTACTATACCTTTGATAATTCATTACTATTTACTGAAAGCATCCAGAAAACTACACAGATCTTACCACGCTAA", + "dna_sequence_length": 411, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1537", + "location": [ + [ + "NC_000913", + 1637047, + "+", + 411 + ] + ], + "md5": "e2d6205c282adff9818e325977296f8a", + "parent_gene": "", + "protein_md5": "2b96ef1d6b364d38564ed4bc37cc7894", + "protein_translation": "MDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005177" + ], + [ + "gene_synonym", + "ECK1544" + ], + [ + "gene_synonym", + "EcoGene:EG13837" + ], + [ + "gene_synonym", + "GI:90111293" + ], + [ + "gene_synonym", + "GeneID:946054" + ], + [ + "gene_synonym", + "JW5253" + ], + [ + "gene_synonym", + "NP_416068.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77695" + ], + [ + "gene_synonym", + "b1550" + ], + [ + "gene_synonym", + "gnsB" + ], + [ + "gene_synonym", + "ydfY" + ] + ], + "dna_sequence": "ATGAATATTGAAAACTTAAAAACAAAAGCAGAAGCAGATATTTCTGAATATATAACAAAAAAAATTATTGAACTTAAGAAAAAGACCGGGAAAGAAGTTACCAGTATTCAGTTTACCGCACGGGAAAAAATGACGGGTCTTGAAAGCTATGATGTCAAGATTAATTTAATCTGA", + "dna_sequence_length": 174, + "functions": [ + "Qin prophage", + "multicopy suppressor of secG(Cs) and fabA6(Ts)" + ], + "id": "CDS_1538", + "location": [ + [ + "NC_000913", + 1637782, + "-", + 174 + ] + ], + "md5": "8707ba5cf16288a6932b6cf584c03f41", + "parent_gene": "", + "protein_md5": "f32613ff490e25e2fefaa4c8d21e0b24", + "protein_translation": "MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005180" + ], + [ + "gene_synonym", + "ECK1545" + ], + [ + "gene_synonym", + "EcoGene:EG14388" + ], + [ + "gene_synonym", + "GI:90111294" + ], + [ + "gene_synonym", + "GeneID:946097" + ], + [ + "gene_synonym", + "JW5254" + ], + [ + "gene_synonym", + "NP_416069.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76157" + ], + [ + "gene_synonym", + "b1551" + ], + [ + "gene_synonym", + "ynfN" + ] + ], + "dna_sequence": "ATGCGTGAATATCCAAATGGCGAAAAAACACACCTTACTGTAATGGCCGCAGGGTTTCCATCTCTGACCGGAGATCATAAAGTCATTTATGTAGCCGCGGATCGACATGTTACTTCAGAAGAAATTCTGGAAGCAGCAATAAGGCTCTTGAGTTGA", + "dna_sequence_length": 156, + "functions": [ + "Qin prophage", + "cold shock-induced protein" + ], + "id": "CDS_1539", + "location": [ + [ + "NC_000913", + 1638109, + "-", + 156 + ] + ], + "md5": "f1ce54bf2d4e891ec285c2318674d1f6", + "parent_gene": "", + "protein_md5": "ee6fdfbf309bda91cd69caf998ccf451", + "protein_translation": "MREYPNGEKTHLTVMAAGFPSLTGDHKVIYVAADRHVTSEEILEAAIRLLS", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005183" + ], + [ + "gene_synonym", + "ECK1546" + ], + [ + "gene_synonym", + "EcoGene:EG13877" + ], + [ + "gene_synonym", + "GI:16129511" + ], + [ + "gene_synonym", + "GeneID:946099" + ], + [ + "gene_synonym", + "JW1544" + ], + [ + "gene_synonym", + "NP_416070.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A986" + ], + [ + "gene_synonym", + "b1552" + ], + [ + "gene_synonym", + "cspI" + ], + [ + "gene_synonym", + "cspJ" + ] + ], + "dna_sequence": "ATGTCTAACAAAATGACTGGTTTAGTGAAATGGTTTAACCCTGAAAAAGGTTTTGGTTTCATCACGCCGAAAGATGGCAGCAAAGATGTGTTTGTCCATTTCTCAGCAATTCAGAGCAACGATTTCAAAACATTAACTGAGAATCAGGAAGTTGAATTTGGTATTGAGAACGGACCTAAAGGTCCTGCCGCTGTTCATGTAGTGGCGCTTTGA", + "dna_sequence_length": 213, + "functions": [ + "Qin prophage", + "cold shock protein" + ], + "id": "CDS_1540", + "location": [ + [ + "NC_000913", + 1638667, + "-", + 213 + ] + ], + "md5": "d7a8daa56145a32b5f76b1df2410c7c9", + "parent_gene": "", + "protein_md5": "b98c3a56239a4d41bb1c4e941f252f75", + "protein_translation": "MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPKGPAAVHVVAL", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005187" + ], + [ + "gene_synonym", + "ECK1547" + ], + [ + "gene_synonym", + "EcoGene:EG13828" + ], + [ + "gene_synonym", + "GI:16129512" + ], + [ + "gene_synonym", + "GeneID:946101" + ], + [ + "gene_synonym", + "JW1545" + ], + [ + "gene_synonym", + "NP_416071.1" + ], + [ + "gene_synonym", + "Rz" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76158" + ], + [ + "gene_synonym", + "b1553" + ], + [ + "gene_synonym", + "rzpQ" + ], + [ + "gene_synonym", + "ydfP" + ] + ], + "dna_sequence": "GTGAATCAGATATTCATGGTGATTTTTCTCGTGTTGTCAGGATTTATCGTCGGAAATGTCTGGAGCGACCGAGGATGGCAAAAAAAATGGGCGGAACGTGATGCTGCCGCATTATCACAAGAGGTAAATGCTCAATTTGCTGCTCGAATAATTGAACAGGGGCGAACTATAGCCCGTGATGAGGCTGTTAAAGATGCGCAACAGAAATCTGCTGAAATTTCTGCCAGGGCTGCTTATCTGTCTGATAGTGTTAACCAGTTGCGTGCCGAAGCAAAAAAATATGCCATACGCCTTGACGCAGCGAAGCATACCGCAGATCTTGCCGCTGCCGTCAGAGGCAAAACAACCAAAACCGCCGAAGGAATGCTCACCAACATGCTCGGAGATATTGCAGCAGAAGCTCAGCTTTATGCTGAAATTGCTGACGAACGCTACATCGCAGGAGTGACTTGTCAACAGATCTATGAATCTTTAAGAGATAAAAAGCATCAAATGTAG", + "dna_sequence_length": 498, + "functions": [ + "Rz-like protein, Qin prophage" + ], + "id": "CDS_1541", + "location": [ + [ + "NC_000913", + 1639527, + "-", + 498 + ] + ], + "md5": "df46a06f3b49d04a5b11020898687796", + "parent_gene": "", + "protein_md5": "5abaa9d7a30212b06e9c9fbb4aa28503", + "protein_translation": "MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4503" + ], + [ + "gene_synonym", + "EcoGene:EG14493" + ], + [ + "gene_synonym", + "GI:226524715" + ], + [ + "gene_synonym", + "GeneID:7751615" + ], + [ + "gene_synonym", + "Rz1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P601" + ], + [ + "gene_synonym", + "YP_002791241.1" + ], + [ + "gene_synonym", + "b4689" + ], + [ + "gene_synonym", + "rzoQ" + ] + ], + "dna_sequence": "ATGCGCAACAGAAATCTGCTGAAATTTCTGCCAGGGCTGCTTATCTGTCTGATAGTGTTAACCAGTTGCGTGCCGAAGCAAAAAAATATGCCATACGCCTTGACGCAGCGAAGCATACCGCAGATCTTGCCGCTGCCGTCAGAGGCAAAACAACCAAAACCGCCGAAGGAATGCTCACCAACATGCTCGGAGATATTGCAGCAGAAGCTCAGCTTTATGCTGAAATTGCTGACGAACGCTACATCGCAGGAGTGA", + "dna_sequence_length": 255, + "functions": [ + "putative Rz1-like lipoprotein, Qin prophage" + ], + "id": "CDS_1542", + "location": [ + [ + "NC_000913", + 1639334, + "-", + 255 + ] + ], + "md5": "c80ad906358ed27a8c40aefea3e55c31", + "parent_gene": "", + "protein_md5": "c94c4c93106c60bbcc2842366e18a800", + "protein_translation": "MRNRNLLKFLPGLLICLIVLTSCVPKQKNMPYALTQRSIPQILPLPSEAKQPKPPKECSPTCSEILQQKLSFMLKLLTNATSQE", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005189" + ], + [ + "gene_synonym", + "ECK1548" + ], + [ + "gene_synonym", + "EcoGene:EG13829" + ], + [ + "gene_synonym", + "GI:16129513" + ], + [ + "gene_synonym", + "GeneID:946100" + ], + [ + "gene_synonym", + "JW1546" + ], + [ + "gene_synonym", + "NP_416072.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76159" + ], + [ + "gene_synonym", + "arrQ" + ], + [ + "gene_synonym", + "b1554" + ], + [ + "gene_synonym", + "rrrQ" + ], + [ + "gene_synonym", + "ydfQ" + ] + ], + "dna_sequence": "ATGAACACAAAAATCAGATACGGCCTGTCGGCTGCCGTTCTGGCGCTGATTGGTGCTGGCGCATCTGCTCCTCAGATACTTGACCAGTTTCTGGACGAAAAAGAAGGTAACCACACAATGGCATACCGCGATGGTTCTGGCATATGGACCATCTGTCGGGGTGCCACAGTGGTGGATGGAAAAACCGTTTTTCCCAATATGAAACTGTCGAAGGAAAAATGCGACCAGGTCAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGTCCCTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAGCGGCTGAATGCTGGTGATCGTAAAGGTGCATGCGAAGCGATTCGCTGGTGGATTAAGGATGGCGGACGCGATTGCCGCATTCGTTCAAATAACTGTTACGGTCAGGTTATTCGTCGTGACCAGGAGAGCGCATTAACCTGCTGGGGGATAGAACAGTGA", + "dna_sequence_length": 534, + "functions": [ + "Qin prophage", + "putative lysozyme" + ], + "id": "CDS_1543", + "location": [ + [ + "NC_000913", + 1640057, + "-", + 534 + ] + ], + "md5": "9116cf3aaef2aa677f388dc4f3c3e902", + "parent_gene": "", + "protein_md5": "46f99366dbf7ada6a1dcf09b9260284a", + "protein_translation": "MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ", + "protein_translation_length": 177, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005192" + ], + [ + "gene_synonym", + "ECK1549" + ], + [ + "gene_synonym", + "EcoGene:EG13830" + ], + [ + "gene_synonym", + "GI:16129514" + ], + [ + "gene_synonym", + "GeneID:946095" + ], + [ + "gene_synonym", + "JW1547" + ], + [ + "gene_synonym", + "NP_416073.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76160" + ], + [ + "gene_synonym", + "b1555" + ], + [ + "gene_synonym", + "ydfR" + ] + ], + "dna_sequence": "ATGACTCAAGACTATGAACTGGTTGTGAAAGGAGTCCGTAATTTTGAGAATAAAGTTACGGTAACTGTAGCCTTACAGGACAAAGAACGCTTTGACGGTGAAATTTTTGACCTGGATGTCGCCATGGACCGTGTTGAAGGAGCTGCGCTGGAGTTTTATGAGGCAGCAGCCAGAAGGAGCGTCCGGCAAGTCTTCCTGGAAGTAGCAGAAAAATTGTCAGAAAAAGTTGAGTCTTATCTGCAGCATCAGTACTCCTTTAAGATTGAAAATCCTGCCAATAAGCACGAGCGTCCTCATCATAAATATCTATGA", + "dna_sequence_length": 312, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1544", + "location": [ + [ + "NC_000913", + 1640365, + "-", + 312 + ] + ], + "md5": "7643c53527d94f602386b8f3db6b7dc8", + "parent_gene": "", + "protein_md5": "e341ddda255b5882a08bb1f87b4c732f", + "protein_translation": "MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005197" + ], + [ + "gene_synonym", + "ECK1550" + ], + [ + "gene_synonym", + "EcoGene:EG13831" + ], + [ + "gene_synonym", + "GI:90111295" + ], + [ + "gene_synonym", + "GeneID:946093" + ], + [ + "gene_synonym", + "JW5255" + ], + [ + "gene_synonym", + "NP_416074.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77237" + ], + [ + "gene_synonym", + "b1556" + ], + [ + "gene_synonym", + "essQ" + ], + [ + "gene_synonym", + "ydfS" + ] + ], + "dna_sequence": "ATGAAATCAATGGATAAGTTAACAACAGGTGTTGCCTATGGCACATCGGCGGGTAATGCTGGTTTCTGGGCATTGCAGTTACTCGATAAAGTAACTCCGTCACAGTGGGCTGCAATCGGTGTGCTGGGTAGCCTGGTTTTTGGCCTGCTGACGTATCTGACAAATCTTTATTTCAAGATTAAAGAAGACAGGCGTAAGGCTGCGAGAGGAGAGTAA", + "dna_sequence_length": 216, + "functions": [ + "Qin prophage", + "putative S lysis protein" + ], + "id": "CDS_1545", + "location": [ + [ + "NC_000913", + 1640585, + "-", + 216 + ] + ], + "md5": "b582b8ec8da8ec25c2eca0e71695e859", + "parent_gene": "", + "protein_md5": "cf2f53c118f7842a10cf2fdd5e047818", + "protein_translation": "MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005199" + ], + [ + "gene_synonym", + "ECK1551" + ], + [ + "gene_synonym", + "EcoGene:EG12203" + ], + [ + "gene_synonym", + "GI:16129516" + ], + [ + "gene_synonym", + "GeneID:946091" + ], + [ + "gene_synonym", + "JW1549" + ], + [ + "gene_synonym", + "NP_416075.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36995" + ], + [ + "gene_synonym", + "b1557" + ], + [ + "gene_synonym", + "cspB" + ] + ], + "dna_sequence": "ATGTCAAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCTGATAAAGGTTTCGGCTTTATTTCTCCTGTTGATGGTAGTAAAGATGTGTTTGTGCATTTTTCTGCGATTCAGAATGATAATTATCGAACCTTATTTGAAGGTCAAAAGGTTACCTTCTCTATAGAGAGTGGTGCTAAAGGTCCTGCAGCAGCAAATGTCATCATTACTGATTAA", + "dna_sequence_length": 216, + "functions": [ + "Qin prophage", + "cold shock protein" + ], + "id": "CDS_1546", + "location": [ + [ + "NC_000913", + 1641554, + "-", + 216 + ] + ], + "md5": "8f287f564521afc675ee70b10e6ee6ef", + "parent_gene": "", + "protein_md5": "fde9de5f8c1d52498f9a5957a8ba432e", + "protein_translation": "MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIITD", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005205" + ], + [ + "gene_synonym", + "ECK1552" + ], + [ + "gene_synonym", + "EcoGene:EG12205" + ], + [ + "gene_synonym", + "GI:16129517" + ], + [ + "gene_synonym", + "GeneID:946090" + ], + [ + "gene_synonym", + "JW1550" + ], + [ + "gene_synonym", + "NP_416076.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A976" + ], + [ + "gene_synonym", + "b1558" + ], + [ + "gene_synonym", + "cspF" + ] + ], + "dna_sequence": "TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCGTATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTTGCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA", + "dna_sequence_length": 213, + "functions": [ + "Qin prophage", + "cold shock protein" + ], + "id": "CDS_1547", + "location": [ + [ + "NC_000913", + 1641855, + "+", + 213 + ] + ], + "md5": "1d6d1499703ba7983ca09fff56613db3", + "parent_gene": "", + "protein_md5": "30eac0badc3f23925a993174d94fe753", + "protein_translation": "MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005207" + ], + [ + "gene_synonym", + "ECK1553" + ], + [ + "gene_synonym", + "EcoGene:EG13832" + ], + [ + "gene_synonym", + "GI:90111296" + ], + [ + "gene_synonym", + "GeneID:946103" + ], + [ + "gene_synonym", + "JW1551" + ], + [ + "gene_synonym", + "NP_416077.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76161" + ], + [ + "gene_synonym", + "b1559" + ], + [ + "gene_synonym", + "quuQ" + ], + [ + "gene_synonym", + "ydfT" + ] + ], + "dna_sequence": "ATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATCTCCAAAATTGAGCGATGACGCTCCAGCGACAGGCACCGGTTGTTTAACAATTACGGATGTAATGGCAGCGCAGGGGATGGTGCAGTCGAAAGCACCACTTGGGTTGGCCTTATTTCTGGCAAAAGTTGGTGTTCAGGACCCTCAGTTTGCGATTGAAGGCCTGCTAAATTACGCGATGGCACTGGATAACCCGACATTGAACAAATTGAGTGAAGAAATCCGGTTACAGATTATTCCTTACCTCGTGAGTTTTGCCTTTGCTGATTACTCCAGGTCTGCGGCAAGTAAGGCTCGCTGTGAGCATTGTTCAGGTACGGGATTTTATAATGTATTGCGCGAAGTGGTGAAACACTACAGACGCGGGGAATCTGTAATCAAGGAAGAATGGGTGAAGGAACTATGTCAGCATTGCCATGGTAAGGGCGAAGCCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGGATTGTTCTGGATGAAAAAAGAACCCGGTTTCATGGCGTACCGGTATATAAGATTTGTGGGCGTTGTAATGGAAACCGGTTTAGTCGTTTACCGACCACGCTGGCACGACGTCATGTCCAGAAGCTGGTACCAGACCTGACCGATTATCAGTGGTATAAGGGGTATGCGGACGTCATTGGTAAACTGGTAACAAAGTGCTGGCAGGAAGAAGCATACGCGGAAGCGCAATTGAGGAAGGTGACGAGATAA", + "dna_sequence_length": 753, + "functions": [ + "Qin prophage", + "putative antitermination protein Q" + ], + "id": "CDS_1548", + "location": [ + [ + "NC_000913", + 1643241, + "-", + 753 + ] + ], + "md5": "655ba46d6073bad2bf3724ef797744ba", + "parent_gene": "", + "protein_md5": "15ae0f4008b78097fdabe6fd63c88e8e", + "protein_translation": "MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005209" + ], + [ + "gene_synonym", + "ECK1554" + ], + [ + "gene_synonym", + "EcoGene:EG13833" + ], + [ + "gene_synonym", + "GI:226524716" + ], + [ + "gene_synonym", + "GeneID:946108" + ], + [ + "gene_synonym", + "JW5909" + ], + [ + "gene_synonym", + "NP_416078.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76162" + ], + [ + "gene_synonym", + "b1560" + ], + [ + "gene_synonym", + "ydfU" + ] + ], + "dna_sequence": "GTGCGGGTATTACTTAGACCTGTTCTGGTGCCTGAGCTTGGGCTGGTGGTCCTTAAGCCGGGCCGTGAATCCATACAGATATTTCATAATCCTCGAGTGCTGGTGGAACCGGAACCAAAAAGCATGCGTAATCTGCCATCCGGAGTCGTTCCTGCCGTTCGCCAGCCGCTGGCGGAAGACAAAACATTGCTGCCGTTTTTTAGTAACGAACGGGTGATTCGTGCTGCTGGCGGCGTTGGCGCATTGTCCGACTGGCTATTACGTCATGTTACATCCTGCCAGTGGCCTAATGGCGATTACCATCACACTGAAACAGTCATTCACCGTTATGGTACCGGCGCAATGGTGTTGTGCTGGCACTGCGACAACCAACTGCGTGACCAGACATCGGAATCACTGGAGCTGCTTGCTCAACAAAATCTGACAGCATGGGTGATTGACGTCATCCGTCACGCAATAAGCGGTACGCAGGAGCGGGAATTATCTTTGGCTGAATTATCCTGGTGGGCGGTCTGCAATCAGGTGGTGGATGCACTACCTGAGGCTGTATCGCGTCGTTCGCTGGGATTACCAGCGGAAAAAATCTGCTCGGTGTACCGCGAAAGCGACATCGTACCGGGAGAGCTGACCGCCACCAGCATATTGAAACAACGCACAAAAAATCTTGCACCGTTGCCTTACGCCCACCAGCAACAAAAATCACCACAGGAAAAGACGGTGGTAAGCATCACCGTTGATCCAGAGTCTCCGGAATCTTTCATGAAGCTGCCTAAACGTCGCCGCTGGGTTAAGGAGAAATACACACGTTGGGTTAAGACACAGCCGTGTGCTTGCTGCGGTATGCCAGCCGACGATCCGCATCATCTGATTGGTCACGGGCAGGGCGGAATGGGAACAAAAGCACATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGATAAGTATGGCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTGGCGTAA", + "dna_sequence_length": 1050, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1549", + "location": [ + [ + "NC_000913", + 1644304, + "-", + 1050 + ] + ], + "md5": "8530281d6cb7db6e12159aeb7f19e815", + "parent_gene": "", + "protein_md5": "65f93608559390a786cdcd55a4542ef4", + "protein_translation": "MRVLLRPVLVPELGLVVLKPGRESIQIFHNPRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKTLLPFFSNERVIRAAGGVGALSDWLLRHVTSCQWPNGDYHHTETVIHRYGTGAMVLCWHCDNQLRDQTSESLELLAQQNLTAWVIDVIRHAISGTQERELSLAELSWWAVCNQVVDALPEAVSRRSLGLPAEKICSVYRESDIVPGELTATSILKQRTKNLAPLPYAHQQQKSPQEKTVVSITVDPESPESFMKLPKRRRWVKEKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHNELHTDTVAFEDKYGSQLELIFRFIDRALAIGVLA", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005215" + ], + [ + "gene_synonym", + "ECK1555" + ], + [ + "gene_synonym", + "EcoGene:EG11129" + ], + [ + "gene_synonym", + "GI:16129520" + ], + [ + "gene_synonym", + "GeneID:946109" + ], + [ + "gene_synonym", + "JW1553" + ], + [ + "gene_synonym", + "NP_416079.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07010" + ], + [ + "gene_synonym", + "b1561" + ], + [ + "gene_synonym", + "rem" + ] + ], + "dna_sequence": "ATGATGAACATCGAAGAACTGCGTAAAATTTTTTGTGAAGATGGCCTCTATGCTGTGTGCGTTGAAAATGGAAATCTTGTTAGTCATTACCGCATTATGTGTTTGCGAAAGAATGGGGCTGCGTTAATTAATTTTGTGGATGCTCGGGTCACGGACGGATTTATCTTGCGCGAAGGTGAGTTTGTCACTTCATTACAGGCATTGAAAGAGATCGGAATAAAAGCTGGCTTTTCTGCTTTTTCAGGAGAATAA", + "dna_sequence_length": 252, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1550", + "location": [ + [ + "NC_000913", + 1644902, + "-", + 252 + ] + ], + "md5": "a30288bd97ca2d53c79784608dce9e8f", + "parent_gene": "", + "protein_md5": "1a5508b7c385d785866217f3c2dca797", + "protein_translation": "MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALINFVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005219" + ], + [ + "gene_synonym", + "ECK1556" + ], + [ + "gene_synonym", + "EcoGene:EG11130" + ], + [ + "gene_synonym", + "GI:16129521" + ], + [ + "gene_synonym", + "GeneID:948616" + ], + [ + "gene_synonym", + "JW1554" + ], + [ + "gene_synonym", + "NP_416080.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACG6" + ], + [ + "gene_synonym", + "b1562" + ], + [ + "gene_synonym", + "hokD" + ], + [ + "gene_synonym", + "relF" + ] + ], + "dna_sequence": "ATGAAGCAGCAAAAGGCGATGTTAATCGCCCTGATCGTCATCTGTTTAACCGTCATAGTGACGGCACTGGTAACGAGGAAAGACCTCTGCGAGGTACGAATCCGAACCGGCCAGACGGAGGTCGCTGTCTTCACAGCTTACGAACCTGAGGAGTAA", + "dna_sequence_length": 156, + "functions": [ + "Qin prophage", + "small toxic polypeptide" + ], + "id": "CDS_1551", + "location": [ + [ + "NC_000913", + 1645274, + "-", + 156 + ] + ], + "md5": "715545f3d824fa046bd11863bf7b9fa4", + "parent_gene": "", + "protein_md5": "7f73301af75938c9ed947358615523da", + "protein_translation": "MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005221" + ], + [ + "gene_synonym", + "ECK1557" + ], + [ + "gene_synonym", + "EcoGene:EG11131" + ], + [ + "gene_synonym", + "GI:16129522" + ], + [ + "gene_synonym", + "GeneID:947549" + ], + [ + "gene_synonym", + "JW1555" + ], + [ + "gene_synonym", + "NP_416081.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C077" + ], + [ + "gene_synonym", + "b1563" + ], + [ + "gene_synonym", + "relE" + ] + ], + "dna_sequence": "ATGGCGTATTTTCTGGATTTTGACGAGCGGGCACTAAAGGAATGGCGAAAGCTGGGCTCGACGGTACGTGAACAGTTGAAAAAGAAGCTGGTTGAAGTACTTGAGTCACCCCGGATTGAAGCAAACAAGCTCCGTGGTATGCCTGATTGTTACAAGATTAAGCTCCGGTCTTCAGGCTATCGCCTTGTATACCAGGTTATAGACGAGAAAGTTGTCGTTTTCGTGATTTCTGTTGGGAAAAGAGAACGCTCGGAAGTATATAGCGAGGCGGTCAAACGCATTCTCTGA", + "dna_sequence_length": 288, + "functions": [ + "Qin prophage", + "toxin of the RelE-RelB toxin-antitoxin system" + ], + "id": "CDS_1552", + "location": [ + [ + "NC_000913", + 1645633, + "-", + 288 + ] + ], + "md5": "48cbeba143b561a78d14bfddee2d5d73", + "parent_gene": "", + "protein_md5": "c7a017f6e2d971dcd2f7cabd6a9b1b0e", + "protein_translation": "MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005224" + ], + [ + "gene_synonym", + "ECK1558" + ], + [ + "gene_synonym", + "EcoGene:EG10836" + ], + [ + "gene_synonym", + "GI:16129523" + ], + [ + "gene_synonym", + "GeneID:948308" + ], + [ + "gene_synonym", + "JW1556" + ], + [ + "gene_synonym", + "NP_416082.1" + ], + [ + "gene_synonym", + "RC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C079" + ], + [ + "gene_synonym", + "b1564" + ], + [ + "gene_synonym", + "relB" + ] + ], + "dna_sequence": "ATGGGTAGCATTAACCTGCGTATTGACGATGAACTTAAAGCGCGTTCTTACGCCGCGCTTGAAAAAATGGGTGTAACTCCTTCTGAAGCGCTTCGTCTCATGCTCGAGTATATCGCTGACAATGAACGCTTGCCGTTCAAACAGACACTCCTGAGTGATGAAGATGCTGAACTTGTGGAGATAGTGAAAGAACGGCTTCGTAATCCTAAGCCAGTACGTGTGACGCTGGATGAACTCTGA", + "dna_sequence_length": 240, + "functions": [ + "antitoxin of the RelE-RelB toxin-antitoxin syste", + "transcriptional repressor" + ], + "id": "CDS_1553", + "location": [ + [ + "NC_000913", + 1645872, + "-", + 240 + ] + ], + "md5": "4bd5cdcc7b3500d048e94c578c55685e", + "parent_gene": "", + "protein_md5": "2ee5b9972217c69447d20b9e5c75e32e", + "protein_translation": "MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005231" + ], + [ + "gene_synonym", + "ECK1559" + ], + [ + "gene_synonym", + "EcoGene:EG13834" + ], + [ + "gene_synonym", + "GI:16129524" + ], + [ + "gene_synonym", + "GeneID:948801" + ], + [ + "gene_synonym", + "JW1557" + ], + [ + "gene_synonym", + "NP_416083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76163" + ], + [ + "gene_synonym", + "b1565" + ], + [ + "gene_synonym", + "ydfV" + ] + ], + "dna_sequence": "ATGTCATTACAAGTATCGCACTACAACATGCTTAGGGCAAGTCACGAAGGAAGTCAGAAAGTAGTCGTAAGAACGGTGATCACTGTCCGCTTTGTGCCAGGAGCAGCCATTGCTAAGTCCATCCTGTATTGTGCAGGTCAGCTCGTTTTTAAAGAGTCCGGCCATCATCTTACTGGTACAGACACCATATACTTTGTGACGGTCAGGCTACATATGCACAACTCAACTTATTCATCTATTTTTTGCTTTAGCATGTCAGTGTTGCTTTCTCGTCGGCGGGTGAGCGGTGACCTGACCTGTCGATAA", + "dna_sequence_length": 306, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1554", + "location": [ + [ + "NC_000913", + 1645897, + "+", + 306 + ] + ], + "md5": "bcb6edad6665e64dce1189f898d3299a", + "parent_gene": "", + "protein_md5": "d41a768c23c4c270cbd0f2a32cfade13", + "protein_translation": "MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005234" + ], + [ + "gene_synonym", + "ECK1560" + ], + [ + "gene_synonym", + "EcoGene:EG13429" + ], + [ + "gene_synonym", + "GI:16129525" + ], + [ + "gene_synonym", + "GeneID:947392" + ], + [ + "gene_synonym", + "JW1558" + ], + [ + "gene_synonym", + "NP_416084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77609" + ], + [ + "gene_synonym", + "b1566" + ], + [ + "gene_synonym", + "flxA" + ] + ], + "dna_sequence": "ATGTCTGTCACAATTCAGGGAAATACCTCAACCGTTATTTCAAACAACTCCGCCCCGGAAGGAACATCAGAAATAGCCAAAATCACAAGACAAATTCAGGTGCTGACTGAAAAGCTTGGGAAAATCTCATCGGAAGAGGGGATGACGACACAGCAGAAAAAAGAAATGGCTGCATTGGTACAGAAGCAAATTGAAAGCCTCTGGGCTCAACTGGAGCAGTTGTTAAGGCAGCAGGCAGAGAAAAAGAATGAAGACGCGACAGTTCAGCCTGATAAAAAAGAAGAGAAAAAAGACGATACAAATACCGCTGGCACCATTGATATTTACGTCTAA", + "dna_sequence_length": 333, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1555", + "location": [ + [ + "NC_000913", + 1646405, + "+", + 333 + ] + ], + "md5": "28279f1b22153eefc80efceac7409ba4", + "parent_gene": "", + "protein_md5": "bbee5d8c49bdf3a19f51c4c20eede9b3", + "protein_translation": "MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALVQKQIESLWAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNTAGTIDIYV", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005236" + ], + [ + "gene_synonym", + "ECK1561" + ], + [ + "gene_synonym", + "EcoGene:EG13835" + ], + [ + "gene_synonym", + "GeneID:946111" + ], + [ + "gene_synonym", + "JW1559" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76164" + ], + [ + "gene_synonym", + "b1567" + ], + [ + "gene_synonym", + "intK" + ], + [ + "gene_synonym", + "ydfW" + ] + ], + "dna_sequence": "CCACTGGATGATGAAAAGAGTGTCCATGAACGAGTGGATAATGCCCGTATTGATTTACGCTCAAAATACTATGTTAAACCTAAAGCTGACCATCCCTGGCTTACGCGCCGAACGCAAAGTCATCAGCAAGTTAAGCCCCCGAAGTTACCTAAAAAGAAGCCTGATCCCGATAAAAAAGATTGA", + "dna_sequence_length": 183, + "id": "CDS_1556", + "location": [ + [ + "NC_000913", + 1647356, + "-", + 183 + ] + ], + "md5": "d78c0dbefa32e54c8b1a02fc12377332", + "parent_gene": "", + "protein_md5": "726eda6d0d6d5872ec38ae61db7c5739", + "protein_translation": "PLDDEKSVHERVDNARIDLRSKYYVKPKADHPWLTRRTQSHQQVKPPKLPKKKPDPDKKD", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005239" + ], + [ + "gene_synonym", + "ECK1562" + ], + [ + "gene_synonym", + "EcoGene:EG13836" + ], + [ + "gene_synonym", + "GeneID:946112" + ], + [ + "gene_synonym", + "JW1560" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76165" + ], + [ + "gene_synonym", + "b1568" + ], + [ + "gene_synonym", + "ydfX" + ] + ], + "dna_sequence": "ATGAAAATCACTCCTGAACAGGCTCGTGAGGCTCTGGATGCCTGGATATGTCGACCAGGAATGACACAGGAGCAGGCGACGATATTAATCACTGAAGCATTCTGGGCTTTGAAAGAGCGCCCGAACATCGATGTTCAGCGTGTCACATATGAAGGTGGCGCGATTGATCAGCGAGCGCTTGGCGTTAATCGAGTGAAGATATTTGAACGCTGGAAGGCTATCGACACCAGGGATAAGCGTGAAAAGTTCACGGCGCTAGTGCCTGCAATTATGGAGGCT", + "dna_sequence_length": 279, + "id": "CDS_1557", + "location": [ + [ + "NC_000913", + 1647636, + "-", + 279 + ] + ], + "md5": "c6b1368bf5e5724f4613b699fc40722d", + "parent_gene": "", + "protein_md5": "f2ecdc5b85b72ae1fd0beea1faf67974", + "protein_translation": "MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTYEGGAIDQRALGVNRVKIFERWKAIDTRDKREKFTALVPAIMEA", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005244" + ], + [ + "gene_synonym", + "ECK1563" + ], + [ + "gene_synonym", + "EcoGene:EG10228" + ], + [ + "gene_synonym", + "GI:16129528" + ], + [ + "gene_synonym", + "GeneID:946120" + ], + [ + "gene_synonym", + "JW1561" + ], + [ + "gene_synonym", + "NP_416087.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06965" + ], + [ + "gene_synonym", + "b1569" + ], + [ + "gene_synonym", + "dicC" + ], + [ + "gene_synonym", + "ftsT" + ] + ], + "dna_sequence": "ATGCTTAAAACTGACGCTCTTTTGTATTTCGGTTCAAAAACAAAACTTGCACAAGCAGCAGGTATTCGTTTGGCTTCGCTTTATAGCTGGAAAGGGGATTTAGTTCCCGAAGGTCGCGCGATGCGTCTACAGGAGGCATCTGGCGGGGAGCTTCAGTATGATCCCAAAGTTTATGATGAATATCGTAAGACGAAGCGGGCGGGGCGGTTGAACAATGAAAATCACTCCTGA", + "dna_sequence_length": 231, + "functions": [ + "Qin prophage", + "DNA-binding transcriptional regulator for DicB" + ], + "id": "CDS_1558", + "location": [ + [ + "NC_000913", + 1647850, + "-", + 231 + ] + ], + "md5": "94b04f8569693698a8f47ea5afed1b63", + "parent_gene": "", + "protein_md5": "f7db038e52a135431bf0202efcf513ed", + "protein_translation": "MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDEYRKTKRAGRLNNENHS", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005248" + ], + [ + "gene_synonym", + "ECK1564" + ], + [ + "gene_synonym", + "EcoGene:EG10226" + ], + [ + "gene_synonym", + "GI:16129529" + ], + [ + "gene_synonym", + "GeneID:946241" + ], + [ + "gene_synonym", + "JW1562" + ], + [ + "gene_synonym", + "NP_416088.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06966" + ], + [ + "gene_synonym", + "b1570" + ], + [ + "gene_synonym", + "dicA" + ], + [ + "gene_synonym", + "ftsT" + ] + ], + "dna_sequence": "ATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGCCCTGAAAATCTCCCATGTGTCTGTATCACAATGGGAACGGGGTGATAGTGAACCTACAGGGAAGAACCTTTTTGCCCTCAGTAAAGTATTGCAATGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAA", + "dna_sequence_length": 408, + "functions": [ + "Qin prophage", + "putative regulator for DicB" + ], + "id": "CDS_1559", + "location": [ + [ + "NC_000913", + 1647934, + "+", + 408 + ] + ], + "md5": "d35d0da235dd2c533a53957ae5076ca7", + "parent_gene": "", + "protein_md5": "e6952db34904bfaa11833ea700728d7d", + "protein_translation": "METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNKLFEELLKARQRTNKR", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005251" + ], + [ + "gene_synonym", + "ECK1565" + ], + [ + "gene_synonym", + "EcoGene:EG11300" + ], + [ + "gene_synonym", + "GI:16129530" + ], + [ + "gene_synonym", + "GeneID:946082" + ], + [ + "gene_synonym", + "JW1563" + ], + [ + "gene_synonym", + "NP_416089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACW8" + ], + [ + "gene_synonym", + "b1571" + ], + [ + "gene_synonym", + "ydfA" + ] + ], + "dna_sequence": "ATGGATACTATCGATCTTGGCAACAACGAATCTCTGGTGTACGGCGTGTTTCCAAACCAGGACGGCACGTTCACCGCAATGACGTATACCAAAAGCAAAACGTTTAAAACCGAAAATGGTGCCCGTCGCTGGCTGGAAAGAAACTCAGGTGAGTGA", + "dna_sequence_length": 156, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1560", + "location": [ + [ + "NC_000913", + 1648508, + "+", + 156 + ] + ], + "md5": "8c4c2e412d263fe910823006ab08892a", + "parent_gene": "", + "protein_md5": "7693bff4a391484be010e55d413115bf", + "protein_translation": "MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005253" + ], + [ + "gene_synonym", + "ECK1566" + ], + [ + "gene_synonym", + "EcoGene:EG11301" + ], + [ + "gene_synonym", + "GI:90111298" + ], + [ + "gene_synonym", + "GeneID:946176" + ], + [ + "gene_synonym", + "JW1564" + ], + [ + "gene_synonym", + "NP_416090.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29009" + ], + [ + "gene_synonym", + "b1572" + ], + [ + "gene_synonym", + "ydfB" + ] + ], + "dna_sequence": "ATGGATTTCGACACAATCATGGAAAAGGCTTACGAAGAATACTTCGAAGGCCTTGCCGAAGGCGAAGAAGCTCTCAGCTTCAGTGAGTTTAAACAGGCGCTTTCCAGTTCGGCAAAATCTAACGGCTGA", + "dna_sequence_length": 129, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1561", + "location": [ + [ + "NC_000913", + 1648665, + "+", + 129 + ] + ], + "md5": "dffcc346dbef1d90ff98bad255eb4dbb", + "parent_gene": "", + "protein_md5": "0e27ea61b2079b3570e5c3cb30bd5327", + "protein_translation": "MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG", + "protein_translation_length": 42, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005255" + ], + [ + "gene_synonym", + "ECK1567" + ], + [ + "gene_synonym", + "EcoGene:EG11302" + ], + [ + "gene_synonym", + "GI:16129532" + ], + [ + "gene_synonym", + "GeneID:946107" + ], + [ + "gene_synonym", + "JW1565" + ], + [ + "gene_synonym", + "NP_416091.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21418" + ], + [ + "gene_synonym", + "b1573" + ], + [ + "gene_synonym", + "ydfC" + ] + ], + "dna_sequence": "ATGCAGAAACGAGAACCCGTCATCATCGCGCCAGACTATACCGATGATGAACTTTATGAGTGGATGCGCCAGAAAATTAATGCAGCGCAGGATCTGAAATGGGCTAATGAAGCCAGGGCTAAGCAGGCTGAAAATCTGTCCGCTCTGGAGCAGGATATCACCAATCTGGAAAAAGCAGCGGCATTAAGCATTGCCAGAATGATTACATACCCGCGTTAG", + "dna_sequence_length": 219, + "functions": [ + "uncharacterized protein, Qin prophage" + ], + "id": "CDS_1562", + "location": [ + [ + "NC_000913", + 1648823, + "+", + 219 + ] + ], + "md5": "a852638c85bc999d8f400c6f48bf81c0", + "parent_gene": "", + "protein_md5": "2f807a277675b4ff878b3a8809c704fc", + "protein_translation": "MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005260" + ], + [ + "gene_synonym", + "ECK1569" + ], + [ + "gene_synonym", + "EcoGene:EG10227" + ], + [ + "gene_synonym", + "GI:16129533" + ], + [ + "gene_synonym", + "GeneID:946110" + ], + [ + "gene_synonym", + "JW1566" + ], + [ + "gene_synonym", + "NP_416092.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09557" + ], + [ + "gene_synonym", + "b1575" + ], + [ + "gene_synonym", + "dicB" + ], + [ + "gene_synonym", + "ftsT" + ] + ], + "dna_sequence": "ATGAAAACGTTATTACCAAACGTTAATACGTCTGAAGGTTGTTTTGAAATTGGTGTCACTATCAGTAACCCAGTATTTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGA", + "dna_sequence_length": 189, + "functions": [ + "Qin prophage", + "cell division inhibition protein" + ], + "id": "CDS_1563", + "location": [ + [ + "NC_000913", + 1649609, + "+", + 189 + ] + ], + "md5": "f1e896a922fda0e298b778800073fc13", + "parent_gene": "", + "protein_md5": "75f83192dfeb29ae8a707782b7576223", + "protein_translation": "MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGCAQ", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005262" + ], + [ + "gene_synonym", + "ECK1570" + ], + [ + "gene_synonym", + "EcoGene:EG11303" + ], + [ + "gene_synonym", + "GI:16129534" + ], + [ + "gene_synonym", + "GeneID:946102" + ], + [ + "gene_synonym", + "JW1567" + ], + [ + "gene_synonym", + "NP_416093.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29010" + ], + [ + "gene_synonym", + "b1576" + ], + [ + "gene_synonym", + "ydfD" + ] + ], + "dna_sequence": "ATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAA", + "dna_sequence_length": 192, + "functions": [ + "Qin prophage", + "uncharacterized protein" + ], + "id": "CDS_1564", + "location": [ + [ + "NC_000913", + 1649794, + "+", + 192 + ] + ], + "md5": "8f794396aff565723a804d6d81ce0529", + "parent_gene": "", + "protein_md5": "479287795433becd333a4d1ef591c3dc", + "protein_translation": "MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005265" + ], + [ + "gene_synonym", + "ECK1571" + ], + [ + "gene_synonym", + "EcoGene:EG11304" + ], + [ + "gene_synonym", + "GeneID:946113" + ], + [ + "gene_synonym", + "JW1568" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47138" + ], + [ + "gene_synonym", + "b1577" + ], + [ + "gene_synonym", + "ydfE" + ] + ], + "dna_sequence": "ATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCGCCCTGCCCTCGATTCATGGGATGCTGAATATATGCAGGAAAACCGCTGGGATGAGGAGTCTGCTTCTTTTGTCCCGGTTGAGACTGAATCCGATCCGATGAACGTCACTTTTGACAAGCTGGCCCCTGAAGTACAGAACGCTGTCATGGTTAAGTTCGACACATGTGAAAACATCACCGTTGATATGGTTATTAGCGCACAGGAATTGTTGCAGGAAGACATGGCAACATTCGACGGACATATCGTTGAAGCGTTGATGAAAATGCCAGAAGTTAACGCCATGTATCCGGAGCTTAAGTTGCACGCCATTGGGTGGGTTAAGCATAAATGTATTCCTGGTGCTAAATGGCCCGAAATTCAGGCAGAGATGCGCATCTGGAAAAAACGTCGCGAAGGTGAACGCAAGGAAACCGGAAAATACACGTCTGTTGTTGATCTCGCCCGCGCCAGAGCCAATCAACAGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCC", + "dna_sequence_length": 765, + "id": "CDS_1565", + "location": [ + [ + "NC_000913", + 1650078, + "+", + 765 + ] + ], + "md5": "192d1a2ffc8e8a2848c7ca6f957e52bb", + "parent_gene": "", + "protein_md5": "164dc3bf4eece33a11eb4e1da0c245b9", + "protein_translation": "MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELA", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005268" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GeneID:946118" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF60" + ], + [ + "gene_synonym", + "b1578" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "TGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 693, + "id": "CDS_1566", + "location": [ + [ + "NC_000913", + 1650845, + "+", + 693 + ] + ], + "md5": "5a4245c2311fa88d5c863fafcf150b8b", + "parent_gene": "", + "protein_md5": "6f043efed90efdba3ff993ed74572fbf", + "protein_translation": "WALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005270" + ], + [ + "gene_synonym", + "ECK1573" + ], + [ + "gene_synonym", + "EcoGene:EG13188" + ], + [ + "gene_synonym", + "GeneID:946130" + ], + [ + "gene_synonym", + "JW1571" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76168" + ], + [ + "gene_synonym", + "b1579" + ], + [ + "gene_synonym", + "intQ" + ] + ], + "dna_sequence": "GGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGCCGTCATCAAAAATATCCTGAGCATAATCGGTGAAAAAAATCTTGCCTCATCGATTAATAAAGAAAAATTACTGGAGGTTCGTAAAGAGTTACTGACTGGATACCAGATCCCCAAAAGTAACTATATTGTTACACAACCAGGGAGATCGGCTGTAACTGTAAATAATTACATGACAAATCTTAACGCCGTGTTCCAGTTTGGTGTTGATAACGGTTACCTGGCAGATAATCCGTTTAAGGGGATCTCGCCATTAAAGGAATCAAGAACCATTCCGGATCCTCTTTCGCGGGAAGAATTTATCCGTCTTATCGATGCGTGCAGAAATCAGCAAGCAAAAAATTTATGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATGGGCCATGCAGATGCGCAAATGGTATTTCAGGTATACGGAAAATGGATGTCTGAAAACAATAATGCACAGGTAGCTTTGTTAAATACACAGTTAAGCGAGTTTGCCCCAACCATGCCCCATAACGAAGCAATGAAAAATTAA", + "dna_sequence_length": 1158, + "id": "CDS_1567", + "location": [ + [ + "NC_000913", + 1651551, + "+", + 1158 + ] + ], + "md5": "ad099fce3f2141c025ea82962c3a11f5", + "parent_gene": "", + "protein_md5": "9aa09296d693ac6d87a53f07b0d96662", + "protein_translation": "GELRSSVCYAIKTGVFDYAKQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEKNLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWEDIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDVHFREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRHTYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPHNEAMKN", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005272" + ], + [ + "gene_synonym", + "ECK1575" + ], + [ + "gene_synonym", + "EcoGene:EG12452" + ], + [ + "gene_synonym", + "GI:16129538" + ], + [ + "gene_synonym", + "GeneID:946127" + ], + [ + "gene_synonym", + "JW1572" + ], + [ + "gene_synonym", + "NP_416097.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38105" + ], + [ + "gene_synonym", + "b1580" + ], + [ + "gene_synonym", + "rspB" + ] + ], + "dna_sequence": "ATGAAAAGCATATTAATTGAAAAACCGAATCAACTGGCGATTGTCGAACGTGAAATACCCACCCCGTCAGCGGGTGAAGTACGAGTAAAAGTGAAACTTGCCGGAATTTGTGGTTCAGATAGCCATATTTATCGTGGGCATAATCCTTTTGCGAAATATCCGCGCGTCATTGGTCATGAATTCTTTGGCGTCATTGATGCAGTGGGTGAAGGCGTGGAAAGCGCCAGAGTCGGTGAACGTGTTGCTGTCGATCCGGTGGTCAGCTGTGGGCATTGCTATCCGTGCTCTATAGGTAAACCGAACGTTTGTACGACACTGGCTGTATTAGGTGTGCACGCTGACGGTGGTTTCAGTGAATATGCCGTGGTTCCGGCAAAAAATGCGTGGAAAATTCCTGAAGCAGTGGCCGATCAATATGCGGTAATGATCGAACCTTTTACCATTGCGGCTAACGTAACCGGACATGGTCAACCGACTGAAAATGATACCGTTCTGGTTTATGGTGCCGGTCCAATCGGCCTGACGATCGTTCAGGTATTAAAAGGCGTCTATAACGTTAAAAATGTGATTGTTGCCGATCGCATTGATGAACGACTGGAAAAAGCGAAAGAGAGCGGGGCTGACTGGGCGATTAATAACAGCCAGACACCGCTTGGCGAGATTTTCACTGAAAAAGGCATCAAGCCGACATTAATTATCGATGCGGCTTGTCATCCTTCTATCCTGAAAGAGGCCGTAACGCTGGCTTCTCCAGCGGCACGTATTGTATTGATGGGGTTCTCCAGTGAACCGTCTGAAGTGATTCAGCAAGGAATTACCGGAAAAGAACTCTCTATTTTCTCTTCACGCTTAAATGCAAATAAATTCCCGATCGTTATCGACTGGTTAAGTAAAGGGTTAATTAAACCAGAAAAATTAATTACCCATACGTTTGATTTCCAGCATGTTGCTGATGCCATTAGTTTATTTGAACAGGATCAAAAACATTGCTGCAAAGTCTTACTCACTTTTTCTGAATAA", + "dna_sequence_length": 1020, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_1568", + "location": [ + [ + "NC_000913", + 1653915, + "-", + 1020 + ] + ], + "md5": "42eebb79cbd0c2fd56975e73177c5467", + "parent_gene": "", + "protein_md5": "81f242018c6c87beeeca846fb3c3785b", + "protein_translation": "MKSILIEKPNQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFTEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPIVIDWLSKGLIKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005275" + ], + [ + "gene_synonym", + "ECK1576" + ], + [ + "gene_synonym", + "EcoGene:EG12451" + ], + [ + "gene_synonym", + "GI:16129539" + ], + [ + "gene_synonym", + "GeneID:946126" + ], + [ + "gene_synonym", + "JW1573" + ], + [ + "gene_synonym", + "NP_416098.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38104" + ], + [ + "gene_synonym", + "b1581" + ], + [ + "gene_synonym", + "rspA" + ] + ], + "dna_sequence": "ATGAAGATCGTAAAGGCTGAAGTTTTTGTTACCTGTCCGGGGCGTAATTTCGTCACATTAAAAATCACCACTGAGGACGGTATTACGGGCCTTGGGGATGCCACCCTCAATGGACGTGAGCTTTCCGTGGCCTCTTATTTGCAGGATCACCTTTGTCCGCAGCTTATTGGTCGCGATGCGCACCGTATCGAAGATATCTGGCAGTTTTTCTATAAAGGTGCTTACTGGCGTCGCGGTCCGGTTACGATGTCGGCCATTTCAGCGGTTGATATGGCGCTGTGGGATATTAAAGCCAAAGCTGCCAACATGCCGCTTTACCAGTTACTCGGCGGCGCGTCTCGTGAAGGGGTGATGGTTTATTGCCATACCACCGGTCACAGTATTGATGAAGCTCTGGATGATTATGCCCGTCATCAAGAGCTTGGATTCAAAGCCATCCGCGTGCAGTGCGGAATCCCTGGTATGAAAACCACCTACGGCATGTCGAAAGGTAAAGGTCTGGCTTATGAACCCGCAACCAAAGGACAGTGGCCGGAAGAGCAGCTGTGGTCGACGGAGAAATACCTCGATTTCATGCCGAAATTGTTTGACGCGGTACGTAACAAGTTTGGTTTTAATGAACATTTGCTGCATGACATGCACCATCGCTTAACGCCTATTGAAGCGGCGCGCTTTGGTAAAAGCATTGAAGATTATCGCATGTTCTGGATGGAAGACCCGACGCCTGCGGAAAACCAGGAATGCTTCCGTCTCATTCGCCAACATACCGTCACACCCATCGCAGTGGGTGAAGTCTTCAACAGCATCTGGGACTGCAAACAACTGATTGAAGAGCAACTCATCGATTATATCCGCACCACGCTGACCCATGCAGGCGGAATTACCGGTATGCGCCGGATTGCCGATTTTGCTTCGCTGTATCAGGTACGTACTGGCTCACACGGTCCTTCCGATTTGTCACCAGTCTGCATGGCTGCGGCGCTGCACTTTGATCTGTGGGTCCCCAATTTCGGTGTCCAGGAATACATGGGTTATTCCGAACAAATGCTCGAAGTCTTCCCGCACAACTGGACTTTCGATAACGGCTATATGCATCCGGGAGACAAACCGGGTCTTGGTATCGAATTCGATGAAAAGCTGGCGGCGAAATATCCCTATGAACCTGCTTATCTACCAGTCGCACGTCTGGAAGATGGCACGCTGTGGAACTGGTAA", + "dna_sequence_length": 1215, + "functions": [ + "bifunctional D-altronate/D-mannonate dehydratase" + ], + "id": "CDS_1569", + "location": [ + [ + "NC_000913", + 1655141, + "-", + 1215 + ] + ], + "md5": "88ce4fb9e6fb6b71acbb70539a140bb3", + "parent_gene": "", + "protein_md5": "5092bc15a4b7ef6e23fc0d243a499af4", + "protein_translation": "MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDAHRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTLTHAGGITGMRRIADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHNWTFDNGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGTLWNW", + "protein_translation_length": 404, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005279" + ], + [ + "gene_synonym", + "ECK1577" + ], + [ + "gene_synonym", + "EcoGene:EG13839" + ], + [ + "gene_synonym", + "GI:16129540" + ], + [ + "gene_synonym", + "GeneID:946125" + ], + [ + "gene_synonym", + "JW1574" + ], + [ + "gene_synonym", + "NP_416099.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76169" + ], + [ + "gene_synonym", + "b1582" + ], + [ + "gene_synonym", + "ynfA" + ] + ], + "dna_sequence": "ATGATTAAAACAACGTTACTATTTTTTGCTACTGCGCTGTGTGAAATTATTGGATGCTTTCTGCCCTGGTTGTGGTTAAAACGAAACGCCAGTATCTGGCTGTTGCTTCCGGCGGGGATTTCACTGGCGCTGTTTGTCTGGTTGTTAACGTTGCATCCAGCGGCGAGTGGGCGTGTTTACGCGGCTTATGGTGGCGTTTATGTCTGCACGGCGTTGATGTGGCTGCGCGTTGTGGATGGCGTGAAACTGACTCTTTATGACTGGACGGGTGCGTTGATTGCGCTTTGCGGCATGTTGATCATTGTTGCGGGCTGGGGGCGCACGTAG", + "dna_sequence_length": 327, + "functions": [ + "UPF0060 family inner membrane protein" + ], + "id": "CDS_1570", + "location": [ + [ + "NC_000913", + 1655673, + "-", + 327 + ] + ], + "md5": "dbc054b7b8b67a188764801f629f1ae9", + "parent_gene": "", + "protein_md5": "54660bbf25f0bf133109f2ee28f1c11c", + "protein_translation": "MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005284" + ], + [ + "gene_synonym", + "ECK1578" + ], + [ + "gene_synonym", + "EcoGene:EG13840" + ], + [ + "gene_synonym", + "GI:16129541" + ], + [ + "gene_synonym", + "GeneID:946119" + ], + [ + "gene_synonym", + "JW1575" + ], + [ + "gene_synonym", + "NP_416100.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76170" + ], + [ + "gene_synonym", + "b1583" + ], + [ + "gene_synonym", + "ynfB" + ] + ], + "dna_sequence": "ATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGAAAAAGAGTGGGATAAAGCCGACGCCGCTTTTGATAACCGCGATAAATGTGAGCAAAGCGCCAACATCAATGCCTACTGGGAGCCCAATACTTTGCGCTGCCTGGACCGTCGAACTGGCCGCGTTATTACCCCCTAA", + "dna_sequence_length": 342, + "functions": [ + "UPF0482 family putative periplasmic protein" + ], + "id": "CDS_1571", + "location": [ + [ + "NC_000913", + 1655808, + "+", + 342 + ] + ], + "md5": "ced1926b3f83023c6e5865ec3dc5b8e4", + "parent_gene": "", + "protein_md5": "0cf2ea0c11bdcb07e43c5ce7edef3229", + "protein_translation": "MKITLSKRIGLLAILLPCALALSTTVHAETNKLVIESGDSAQSRQHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRCLDRRTGRVITP", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005286" + ], + [ + "gene_synonym", + "ECK1579" + ], + [ + "gene_synonym", + "EcoGene:EG12447" + ], + [ + "gene_synonym", + "GI:16129542" + ], + [ + "gene_synonym", + "GeneID:946117" + ], + [ + "gene_synonym", + "JW1576" + ], + [ + "gene_synonym", + "NP_416101.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A951" + ], + [ + "gene_synonym", + "b1584" + ], + [ + "gene_synonym", + "speG" + ] + ], + "dna_sequence": "ATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCATGTTCATCGCCGCGCAGAATTTCAGATAATTATCTCCCCGGAGTATCAGGGGAAAGGTCTGGCAACCCGTGCCGCCAAATTAGCAATGGACTATGGCTTTACCGTTCTCAATCTCTATAAGCTGTATCTGATCGTTGATAAAGAGAATGAAAAAGCGATTCACATTTACCGCAAGCTTGGCTTTTCGGTTGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAG", + "dna_sequence_length": 561, + "functions": [ + "spermidine N(1)-acetyltransferase" + ], + "id": "CDS_1572", + "location": [ + [ + "NC_000913", + 1656184, + "+", + 561 + ] + ], + "md5": "ef00e50ac0f8cfc3e41ef6b6d1b254d6", + "parent_gene": "", + "protein_md5": "a14f98a81c0b073879310c83ed38d3e4", + "protein_translation": "MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ", + "protein_translation_length": 186, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005288" + ], + [ + "gene_synonym", + "ECK1580" + ], + [ + "gene_synonym", + "EcoGene:EG13841" + ], + [ + "gene_synonym", + "GI:90111299" + ], + [ + "gene_synonym", + "GeneID:946131" + ], + [ + "gene_synonym", + "JW5258" + ], + [ + "gene_synonym", + "NP_416102.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67553" + ], + [ + "gene_synonym", + "b1585" + ], + [ + "gene_synonym", + "ynfC" + ] + ], + "dna_sequence": "GTGAAATACAAATTACTACCATGCTTACTCGCGATATTCCTCACAGGATGTGACCGCACAGAGGTAACACTTTCATTTACCCCTGAGATGGCCAGTTTCTCTAATGAATTCGATTTTGATCCGCTGCGTGGTCCGGTAAAAGATTTCACTCAGACATTAATGGATGAGCAAGGTGAAGTGACGAAACGTGTTTCTGGGACTTTGTCGGAAGAAGGCTGTTTTGATTCACTCGAATTACTGGATCTGGAAAATAATACCGTGGTCGCTCTGGTACTGGACGCCAATTATTACCGTGATGCCGAGACGCTGGAGAAGAGAGTACGTTTACAGGGAAAATGCCAGCTAGCAGAATTACCTTCTGCCGGGGTGAGTTGGGAAACCGATGATAATGGCTTCGTGATTAAAGCCAGCAGCAAACAAATGCAGATGGAATATCGCTATGATGATCAGGGTTATCCGCTGGGTAAAACCACGAAAAGTAACGACAAAACATTATCTGTCAGCGCCACGCCATCAACGGATCCGATCAAAAAATTAGATTACACAGCGGTTACTTTACTGAATAATCAACGGGTTGGTAATGTAAAACAGAGCTGTGAATATGACAGTCACGCTAATCCGGTGGACTGTCAGCTAATCATTGTTGATGAAGGAGTAAAACCCGCCGTCGAACGGGTTTACACCATCAAAAATACGATCGATTATTATTAA", + "dna_sequence_length": 711, + "functions": [ + "UPF0257 family lipoprotein" + ], + "id": "CDS_1573", + "location": [ + [ + "NC_000913", + 1657457, + "-", + 711 + ] + ], + "md5": "e6c588ee59a4260cea3882383023233a", + "parent_gene": "", + "protein_md5": "9333e9f1da247cee7d3329e1bb40a843", + "protein_translation": "MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRGPVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAETLEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKSNDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEGVKPAVERVYTIKNTIDYY", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005297" + ], + [ + "gene_synonym", + "ECK1581" + ], + [ + "gene_synonym", + "EcoGene:EG13842" + ], + [ + "gene_synonym", + "GI:90111300" + ], + [ + "gene_synonym", + "GeneID:946133" + ], + [ + "gene_synonym", + "JW5259" + ], + [ + "gene_synonym", + "NP_416103.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76172" + ], + [ + "gene_synonym", + "b1586" + ], + [ + "gene_synonym", + "ynfD" + ] + ], + "dna_sequence": "ATGAAACTCTCAACCTGCTGTGCCGCGCTTCTGCTCGCCCTCGCCTCACCCGCGGTACTCGCCGCGCCGGGATCCTGTGAGCGCATACAGAGCGATATATCACAGCGCATTATCAATAATGGCGTACCCGAAAGCAGCTTCACGTTAAGTATTGTACCCAATGACCAGGTTGATCAGCCTGATTCCCAGGTCGTCGGCCATTGCGCTAATGATACGCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGCTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAA", + "dna_sequence_length": 306, + "functions": [ + "DUF1161 family periplasmic protein" + ], + "id": "CDS_1574", + "location": [ + [ + "NC_000913", + 1657565, + "+", + 306 + ] + ], + "md5": "405c5639315c9c409114a4b9face3d9c", + "parent_gene": "", + "protein_md5": "aac39d8f849e8d030cb4c1dc3a9352dc", + "protein_translation": "MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSGNVSAPAQSSQDGAPAEPQ", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005302" + ], + [ + "gene_synonym", + "ECK1582" + ], + [ + "gene_synonym", + "EcoGene:EG13843" + ], + [ + "gene_synonym", + "GI:16129545" + ], + [ + "gene_synonym", + "GeneID:946135" + ], + [ + "gene_synonym", + "JW1579" + ], + [ + "gene_synonym", + "NP_416104.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77374" + ], + [ + "gene_synonym", + "b1587" + ], + [ + "gene_synonym", + "ynfE" + ] + ], + "dna_sequence": "ATGTCCAAAAATGAACGAATGGTGGGCATCAGCCGCAGAACACTCGTTAAATCTACCGCGATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGTGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTAATCATCCCGATCGCTTGAATTACCCAATGAAACGCGTGGGCAAACGCGGCGAAGGCAAATTCGAACGGATTAGCTGGGATGAAGCCCTGGATACTATCGCCAGTAGCCTGAAGAAAACCGTCGAACAATATGGCAATGAGGCTGTATATATTCAGTACTCTTCGGGGATCGTTGGCGGCAATATGACCCGCTCTTCGCCATCAGCCTCGGCGGTCAAACGCCTGATGAACTGCTACGGCGGTTCACTCAACCAGTATGGCTCCTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATAAATACTGCGTCGGCTATGACGAAAAAACCTTACCCGCAGATGCACCCAAAAATGGTCACTATAAAGCCTATATTCTTGGTGAAGGTGACGATAAAACAGCGAAAACGCCGCAGTGGGCTTCGCAAATTACCGGTATCCCGGAGGACCGTATCATCAAACTGGCGCGTGAAATTGGCACAGCAAAACCCGCTTATATCTGCCAGGGCTGGGGGCCACAACGCCAGGCAAACGGCGAACTGACTGCACGCGCTATTGCTATGTTACCTATTTTGACGGGCAATGTCGGCATCAGCGGCGGAAATAGTGGCGCGCGTGAATCGACCTATACCATTACCATAGAACGCCTGCCGGTGCTGGATAATCCGGTCAAAACGTCAATCTCCTGCTTCAGCTGGACAGATGCTATCGATCATGGTCCGCAAATGACGGCAATCCGCGACGGCGTCCGCGGCAAAGATAAACTGGATGTGCCCATTAAGTTCATCTGGAACTACGCGGGAAATACCCTCGTTAATCAGCATTCTGACATCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCGAAAACTTTATGACCTCATCGGCAAAATATGCCGACATTCTGCTGCCAGACCTGATGACCGTTGAGCAGGAAGATATTATTCCTAACGACTACGCCGGTAACATGGGATATCTCATTTTCCTCCAGCCTGTCACCAGCGAAAAATTCGAACGCAAACCGATTTACTGGATCCTGAGTGAAGTCGCGAAACGTCTTGGACCTGACGTCTATCAAAAGTTCACAGAAGGTCGCACGCAGGAACAATGGTTACAACATCTGTACGCCAAAATGCTTGCCAAAGATCCGGCGTTACCGTCTTACGACGAACTGAAAAAAATGGGTATCTATAAGCGTAAAGATCCCAATGGCCATTTTGTCGCCTACAAAGCATTTCGTGACGACCCCGAGGCAAATCCACTTAAAACGCCTTCCGGTAAGATTGAAATTTATTCCAGCAGGCTGGCGGAAATTGCCCGTACCTGGGAACTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGGTGTGGATCAACCCTATAGATGCGCAGAAACGTGGGATTGCCAACGGCGATATGGTGCGGGTGTTTAACCATCGTGGCGAAGTTCGGCTACCAGCCAAAGTAACACCACGTATTCTCCCTGGAGTTAGCGCTATGGGCCAGGGAGCCTGGCACGAGGCCAATATGTCTGGCGATAAAATCGACCATGGCGGCTGTGTGAATACGCTAACCACTCTGCGCCCTTCACCACTGGCGAAGGGAAACCCGCAGCACACTAATCTGGTCGAGATCGAAAAAATATAA", + "dna_sequence_length": 2427, + "functions": [ + "putative selenate reductase, periplasmic" + ], + "id": "CDS_1575", + "location": [ + [ + "NC_000913", + 1658069, + "+", + 2427 + ] + ], + "md5": "466eb6e5478560820aa404427faafdaa", + "parent_gene": "", + "protein_md5": "1b4b76be6f7b694a71d9588e75911889", + "protein_translation": "MSKNERMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRNAAAAVQQAREKVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDKTAKTPQWASQITGIPEDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPERRTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQHTNLVEIEKI", + "protein_translation_length": 808, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005307" + ], + [ + "gene_synonym", + "ECK1583" + ], + [ + "gene_synonym", + "EcoGene:EG13844" + ], + [ + "gene_synonym", + "GI:171701681" + ], + [ + "gene_synonym", + "GeneID:945268" + ], + [ + "gene_synonym", + "JW5260" + ], + [ + "gene_synonym", + "NP_416105.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77783" + ], + [ + "gene_synonym", + "b1588" + ], + [ + "gene_synonym", + "ynfF" + ] + ], + "dna_sequence": "ATGAAAATCCATACCACAGAGGCGCTCATGAAGGCTGAAATCAGCCGTAGAAGTCTGATGAAAACCTCCGCACTTGGCAGTCTTGCGCTGGCAAGCAGTGCTTTCACTCTGCCATTTTCCCAAATGGTCCGGGCGGCAGAGGCTCCGGTAGAAGAGAAAGCGGTCTGGAGTTCCTGCACCGTTAACTGCGGGAGCCGCTGTCTGTTACGTTTGCATGTGAAAGATGACACCGTGTACTGGGTGGAGTCTGATACGACAGGTGACGACGTCTACGGTAATCATCAGGTTCGAGCGTGTTTACGCGGGCGCTCTATCCGCCGACGGATGAATCATCCTGATAGGTTGAAATATCCCATGAAGCGCGTCGGCAAGCGCGGTGAAGGTAAATTTGAACGGATAAGTTGGGACGAAGCCCTGGATACCATCAGTGATAATCTTCGGCGGATCCTGAAAGATTACGGCAATGAGGCTGTACATGTCCTGTACGGAACAGGCGTAGATGGCGGAAACATCACCAACTCAAACGTCCCGTACCGTCTGATGAACTCTTGCGGTGGTTTTCTCAGTCGCTATGGCAGCTACAGTACCGCACAGATCAGTGCCGCAATGAGTTATATGTTCGGTGCCAATGATGGCAACAGCCCGGATGATATCGCCAATACGAAACTGGTCGTTATGTTCGGAAATAACCCGGCAGAAACGCGGATGAGCGGCGGTGGTGTCACTTACTACGTCGAGCAAGCCCGCGAACGTTCAAACGCACGCATGATCGTCATCGATCCACGTTATAACGACACTGCTGCCGGGCGTGAAGATGAATGGCTGCCCATTCGCCCTGGCACCGATGGCGCACTGGCCTGTGCGATTGCCTGGGTACTGATTACTGAAAACATGGTCGATCAGCCATTTCTCGACAAATATTGTGTTGGTTACGATGAAAAAACGCTGCCCGCCAACGCACCACGTAACGCGCATTATAAAGCCTATATTCTGGGCGAAGGGCCTGACGGCATAGCTAAAACGCCGGAATGGGCAGCAAAAATCACCAGCATCCCGGCAGAAAAAATTATCCAGTTGGCACGAGAGATCGGTTCAGCAAAACCTGCTTATATTTGTCAGGGTTGGGGGCCACAACGACATTCCAACGGCGAGCAAACATCCCGCGCTATTGCCATGCTTTCCGTTCTCACCGGCAACGTCGGCATAAACGGCGGCAACTCAGGCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGTGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCGAGATGATTGTTGGCATTGACCACTTCATGACGGCCTCGGCTAAGTATTGCGATATCCTGTTGCCCGACCTGATGCCAACAGAGCAAGAAGACCTTATCTCTCATGAATCTGCAGGGAATATGGGCTATGTGATCCTCGCCCAACCCGCAACCTCAGCAAAATTTGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGCCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAATTTATTCTGAACGACTGGCGAAGATTGCAGATACCTGGGAATTGAAAAAAGATGAAATTATTCATCCCCTTCCTGCGTATACCCCAGGTTTTGATGGCTGGGACGATCCCCTGCGGAAAACCTATCCACTGCAGTTAACGGGCTTCCATTACAAAGCGCGTACCCACTCCAGCTACGGCAATATTGATGTGTTACAGCAGGCCTGCCCACAAGAGGTGTGGATCAACCCCATTGATGCTCAGGCACGCGGTATCCGTCATGGCGATACCGTGCGGGTATTTAACAATAATGGAGAAATGCTGATTGCCGCAAAAGTGACTCCGCGTATTCTGCCTGGCGTTACCGCCATCGGGCAAGGTGCGTGGCTTAAAGCGGATATGTTTGGTGACCGGGTCGATCACGGCGGCAGTATCAATATTCTGACCTCTCACCGCCCTTCACCGCTGGCAAAGGGAAACCCGTCGCACAGCAATCTTGTCCAGATCGAAAAGGTTTAA", + "dna_sequence_length": 2424, + "functions": [ + "S- and N-oxide reductase, A subunit, periplasmic" + ], + "id": "CDS_1576", + "location": [ + [ + "NC_000913", + 1660556, + "+", + 2424 + ] + ], + "md5": "33da4c15d1a31414305617040820b13e", + "parent_gene": "", + "protein_md5": "3ae62eba40d3e4199f5016e7d03549ac", + "protein_translation": "MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSHSNLVQIEKV", + "protein_translation_length": 807, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005309" + ], + [ + "gene_synonym", + "ECK1584" + ], + [ + "gene_synonym", + "EcoGene:EG13845" + ], + [ + "gene_synonym", + "GI:16129547" + ], + [ + "gene_synonym", + "GeneID:945638" + ], + [ + "gene_synonym", + "JW1581" + ], + [ + "gene_synonym", + "NP_416106.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ1" + ], + [ + "gene_synonym", + "b1589" + ], + [ + "gene_synonym", + "ynfG" + ] + ], + "dna_sequence": "ATGACCACACAATATGGATTTTTTATCGATTCCAGCCGCTGTACTGGCTGTAAAACCTGCGAACTGGCGTGCAAAGATTTTAAAGATCTTGGCCCGGAAGTCAGTTTCCGCCGTATTTATGAATACGCTGGCGGCGACTGGCAGGAAGATAATGGCGTCTGGCACCAGAACGTGTTCGCTTATTATCTCTCCATCTCCTGTAACCATTGCGATGACCCCGCATGTACAAAAGTCTGCCCCAGCGGCGCAATGCATAAGCGTGAAGATGGCTTTGTGGTGGTTGATGAAGATGTTTGTATCGGCTGCCGCTACTGCCACATGGCTTGTCCGTACGGCGCGCCACAGTACAATGCTGAAAAAGGGCACATGACGAAGTGCGATGGTTGTTATTCGCGCGTCGCCGAGGGGAAACAACCCATATGTGTCGAATCCTGCCCGCTGCGTGCACTTGAGTTCGGTCCAATTGAAGAGCTGCGCCAGAAGCACGGCACTCTTGCTGCCGTCGCGCCACTGCCGCGCGCGCATTTCACAAAACCCAATATCGTTATCAAACCTAACGCCAACAGCCGCCCGACCGGCGATACCACTGGTTATCTGGCTAATCCGGAGGAAGTGTAA", + "dna_sequence_length": 618, + "functions": [ + "oxidoreductase, Fe-S subunit" + ], + "id": "CDS_1577", + "location": [ + [ + "NC_000913", + 1662990, + "+", + 618 + ] + ], + "md5": "c0f0afb1de5a6c0b8fb302e612a1ec40", + "parent_gene": "", + "protein_md5": "1012a7f951bc4856368ad18a8de3478a", + "protein_translation": "MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005311" + ], + [ + "gene_synonym", + "ECK1585" + ], + [ + "gene_synonym", + "EcoGene:EG13846" + ], + [ + "gene_synonym", + "GI:16129548" + ], + [ + "gene_synonym", + "GeneID:945822" + ], + [ + "gene_synonym", + "JW5261" + ], + [ + "gene_synonym", + "NP_416107.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76173" + ], + [ + "gene_synonym", + "b1590" + ], + [ + "gene_synonym", + "ynfH" + ] + ], + "dna_sequence": "ATGGGAAATGGATGGCATGAGTGGCCACTGGTTATCTTTACCGTATTGGGTCAATGCGTAGTAGGCGCGCTGATTGTTAGCGGAATTGGCTGGTTCGCCGCCAAAAATGACGCAGACCGTCAGCGTATTGTCCGTGGCATGTTTTTCCTCTGGCTGTTGATGGGCGTCGGGTTTATTGCCTCTGTCATGCACCTGGGATCGCCACTGCGGGCGTTTAACTCCCTGAATCGAATCGGAGCTTCTGGTCTGAGTAACGAGATTGCTGCCGGTTCCATATTTTTTGCCGTTGGCGGATTATGGTGGCTGGTGGCAGTCATCGGTAAAATGCCGCAAGCGTTGGGGAAACTCTGGTTACTTTTCAGCATGGCGCTCGGCGTCATTTTCGTCTGGATGATGACCTGCGTGTATCAAATCGACACCGTGCCAACCTGGCATAACGGTTACACTACGCTGGCTTTCTTCCTGACGGTATTGTTGAGCGGTCCAATACTTGCTGCCGCAATTCTGCGGGCAGCTCGCGTTACATTTAATACCACACCATTTGCCATCATTAGCGTTCTGGCGCTGATCGCTTGTGCCGGGGTGATTGTGCTGCAAGGTTTGTCTCTGGCGTCTATTCACTCATCCGTGCAACAAGCCAGCGCACTGGTACCAGATTACGCCTCCTTACAGGTCTGGCGTGTGGTATTGTTATGCGCAGGTCTTGGATGCTGGCTTTGCCCGCTCATTCGTCGCCGTGAACCTCACGTTGCCGGACTTATTCTGGGGCTAATCCTCATACTTGGCGGTGAGATGATCGGGCGTGTGCTCTTTTATGGCCTGCACATGACAGTAGGAATGGCTATTGCAGGTTAA", + "dna_sequence_length": 855, + "functions": [ + "oxidoreductase, membrane subunit" + ], + "id": "CDS_1578", + "location": [ + [ + "NC_000913", + 1663609, + "+", + 855 + ] + ], + "md5": "781859579a625e352a6456d2baf9d8d6", + "parent_gene": "", + "protein_md5": "6a4f85ec825b46f3ad6fe6e5135ea3db", + "protein_translation": "MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIVRGMFFLWLLMGVGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWLVAVIGKMPQALGKLWLLFSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLSGPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVPDYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHMTVGMAIAG", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005314" + ], + [ + "gene_synonym", + "ECK1586" + ], + [ + "gene_synonym", + "EcoGene:EG13847" + ], + [ + "gene_synonym", + "GI:90111302" + ], + [ + "gene_synonym", + "GeneID:945987" + ], + [ + "gene_synonym", + "JW5262" + ], + [ + "gene_synonym", + "NP_416108.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69853" + ], + [ + "gene_synonym", + "b1591" + ], + [ + "gene_synonym", + "dmsD" + ], + [ + "gene_synonym", + "ynfI" + ] + ], + "dna_sequence": "ATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTCGGCCCGTGGGCACTGCCGTCTCCGCCGTGGGGGTCGGTCTGGCTGGATCGCGAATCTGTGCTGTTTGGCGATTCAACATTGGCACTTCGTCAGTGGATGCGCGAGAAAGGCATTCAGTTTGAAATGAAGCAAAACGAACCGGAAGATCATTTTGGTTCACTGCTGTTGATGGCTGCGTGGTTGGCGGAGAATGGTCGCCAGACAGAATGCGAAGAATTGCTGGCATGGCACCTTTTTCCGTGGTCAACACGTTTTCTTGATGTTTTTATCGAAAAAGCAGAACACCCTTTCTACCGTGCACTGGGTGAACTGGCTCGCTTAACGCTGGCGCAATGGCAATCACAACTGTTAATTCCTGTCGCGGTTAAACCGCTGTTTCGATAG", + "dna_sequence_length": 615, + "functions": [ + "twin-argninine leader-binding protein for DmsA and TorA" + ], + "id": "CDS_1579", + "location": [ + [ + "NC_000913", + 1664506, + "+", + 615 + ] + ], + "md5": "87f909599464635a06514470f15f5359", + "parent_gene": "", + "protein_md5": "87b32fe0a9126a345fd5dd213ff708f5", + "protein_translation": "MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005317" + ], + [ + "gene_synonym", + "ECK1587" + ], + [ + "gene_synonym", + "EcoGene:EG13848" + ], + [ + "gene_synonym", + "GI:90111303" + ], + [ + "gene_synonym", + "GeneID:947179" + ], + [ + "gene_synonym", + "JW5263" + ], + [ + "gene_synonym", + "NP_416109.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76175" + ], + [ + "gene_synonym", + "b1592" + ], + [ + "gene_synonym", + "clcB" + ], + [ + "gene_synonym", + "mriT" + ], + [ + "gene_synonym", + "ynfJ" + ] + ], + "dna_sequence": "ATGTTCCACCGTCTGCTTATCGCAACAGTCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCTAACTCCGGCGCTCGGCGGACTGGCGGCGGGTTTGTTGCTGATGGGCTGGCAGAAATTTACCCAACAACGCCCTCATGCGCCGACCGATTATATGGAAGCGTTGCAAACCGATGGACAGTTCGATTACGCAGCAAGCCTGGTTAAATCGCTTGCCTCTCTGCTGGTAGTAACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAGTGCTGTTTGGCACTATGATGTTGGCCTCTCTCGGCCCGGTGATTATTTCCGCCGTCGTGGCATTGCTGGTTAGCAATCTGATTAATCATAGCGACGCGTTACTCTACAACGTACAACTCTCAGTGACGGTTCAGGCTCGTGACTATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTATAGCACCGTACAATCCTTTTTAACCGCCCCACCACTGTTAATGATCATTGCCGGGATCTTCCTTTGTAAACTGTGTGCCGTGCTGGCGAGTAGCGGTTCCGGCGCACCCGGTGGGGTCTTTACACCGACGCTATTTATCGGTCTTGCCATTGGCATGTTGTATGGTCGTAGCCTGGGATTATGGTTCCCTGATGGCGAAGAAATTACACTTTTACTCGGATTGACCGGGATGGCGACACTGTTGGCGGCGACCACGCACGCGCCGATTATGTCGACGTTGATGATATGTGAAATGACCGGGGAGTATCAGCTACTCCCCGGTTTATTGATTGCCTGCGTAATTGCGTCGGTAATTTCGCGGACGTTACACCGTGACTCTATCTACCGCCAGCACACTGCGCAGCATAGCTAA", + "dna_sequence_length": 1257, + "functions": [ + "H(+)/Cl(-) exchange transporter" + ], + "id": "CDS_1580", + "location": [ + [ + "NC_000913", + 1665315, + "+", + 1257 + ] + ], + "md5": "eb1d1d80d6c113e00504a6620bdaf164", + "parent_gene": "", + "protein_md5": "00c4d57bc5e9bcf30330a03ed4374c0b", + "protein_translation": "MFHRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005319" + ], + [ + "gene_synonym", + "ECK1588" + ], + [ + "gene_synonym", + "EcoGene:EG13849" + ], + [ + "gene_synonym", + "GI:90111304" + ], + [ + "gene_synonym", + "GeneID:944927" + ], + [ + "gene_synonym", + "JW5264" + ], + [ + "gene_synonym", + "NP_416110.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6E9" + ], + [ + "gene_synonym", + "b1593" + ], + [ + "gene_synonym", + "ynfK" + ] + ], + "dna_sequence": "ATGCTGAAGCGTTTCTTTATTACCGGTACAGACACTTCTGTAGGGAAAACGGTGGTTTCCCGCGCATTGCTACAAGCGTTAGCCTCCCAGGGAAAAACGGTTGCGGGATATAAACCCGTAGCGAAGGGGAGCAAAGAGACACCCGAAGGGCTGCGTAATAAAGATGCCCTGGTGTTGCAGAGTGTTTCAACCATCGAACTGCCTTATGAAGCAGTTAATCCTATCGCGTTAAGCGAAGAAGAAAGTAGCGTGGCGCACAGTTGCCCAATCAATTACACCCTCATTTCAAACGGCCTGGCAAACCTGACCGAAAAAGTCGATCATGTCGTGGTAGAAGGGACTGGCGGCTGGCGCAGTCTGATGAATGATTTGCGTCCACTCTCTGAATGGGTAGTGCAGGAACAACTGCCGGTGTTGATGGTTGTCGGTATTCAGGAAGGTTGCATTAACCATGCACTGCTAACAGCTCAGGCGATCGCCAACGACGGGCTGCCGCTCATTGGCTGGGTGGCTAACCGAATCAACCCAGGACTGGCGCATTATGCGGAAATCATTGATGTGCTGGGTAAAAAACTTCCGGCACCGCTCATTGGTGAACTGCCTTATCTGCCGCGCGCCGAACAGCGTGAACTGGGGCAATACATCCGCTTAGCTATGCTGCGCAGTGTGCTGGCGGTAGATAGAGTCACGGTGTAA", + "dna_sequence_length": 696, + "functions": [ + "putative dethiobiotin synthetase" + ], + "id": "CDS_1581", + "location": [ + [ + "NC_000913", + 1667219, + "-", + 696 + ] + ], + "md5": "851fa027fa229a4440c05796ebeea90b", + "parent_gene": "", + "protein_md5": "6dcc81da5da8cb8ff7230e9915b177da", + "protein_translation": "MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLAMLRSVLAVDRVTV", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005323" + ], + [ + "gene_synonym", + "ECK1589" + ], + [ + "gene_synonym", + "EcoGene:EG13156" + ], + [ + "gene_synonym", + "GI:16129552" + ], + [ + "gene_synonym", + "GeneID:945510" + ], + [ + "gene_synonym", + "JW1586" + ], + [ + "gene_synonym", + "NP_416111.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P50456" + ], + [ + "gene_synonym", + "b1594" + ], + [ + "gene_synonym", + "dgsA" + ], + [ + "gene_synonym", + "mlc" + ] + ], + "dna_sequence": "GTGGTTGCTGAAAACCAGCCTGGGCACATTGATCAAATAAAGCAGACCAACGCGGGCGCGGTTTATCGCCTGATTGATCAGCTTGGTCCAGTCTCGCGTATCGATCTTTCCCGTCTGGCGCAACTGGCTCCTGCCAGTATCACTAAAATTGTCCGTGAGATGCTCGAAGCACACCTGGTGCAAGAGCTGGAAATCAAAGAAGCGGGGAACCGTGGCCGTCCGGCGGTGGGGCTGGTGGTTGAAACTGAAGCCTGGCACTATCTTTCTCTGCGCATTAGTCGCGGGGAGATTTTCCTTGCTCTGCGCGATCTGAGCAGCAAACTGGTGGTGGAAGAGTCGCAGGAACTGGCGTTAAAAGATGACTTGCCATTGCTGGATCGTATTATTTCCCATATCGATCAGTTTTTTATCCGCCACCAGAAAAAACTTGAGCGTCTAACTTCGATTGCCATAACCTTGCCGGGAATTATTGATACGGAAAATGGTATTGTACATCGCATGCCGTTCTACGAGGATGTAAAAGAGATGCCGCTCGGCGAGGCGCTGGAGCAGCATACCGGCGTTCCGGTTTATATTCAGCATGATATCAGCGCATGGACGATGGCAGAGGCCTTGTTTGGTGCCTCACGCGGGGCGCGCGATGTGATTCAGGTGGTTATCGATCACAACGTGGGGGCGGGCGTCATTACCGATGGTCATCTGCTACACGCAGGCAGCAGTAGTCTCGTGGAAATAGGCCACACACAGGTCGACCCGTATGGGAAACGCTGTTATTGCGGGAATCACGGCTGCCTCGAAACCATCGCCAGCGTGGACAGTATTCTTGAGCTGGCACAGCTGCGTCTTAATCAATCCATGAGCTCGATGTTACATGGACAACCGTTAACCGTGGACTCATTGTGTCAGGCGGCATTGCGCGGCGATCTACTGGCAAAAGACATCATTACCGGGGTGGGCGCGCATGTCGGGCGCATTCTTGCCATCATGGTGAATTTATTTAACCCACAAAAAATACTGATTGGCTCACCGTTAAGTAAAGCGGCAGATATCCTCTTCCCGGTCATCTCAGACAGCATCCGTCAGCAGGCCCTTCCTGCGTATAGTCAGCACATCAGCGTTGAGAGTACTCAGTTTTCTAACCAGGGCACGATGGCAGGCGCTGCACTGGTAAAAGACGCGATGTATAACGGTTCTTTGTTGATTCGTCTGTTGCAGGGTTAA", + "dna_sequence_length": 1221, + "functions": [ + "glucosamine anaerobic growth regulon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_1582", + "location": [ + [ + "NC_000913", + 1668564, + "-", + 1221 + ] + ], + "md5": "4c847385381e1bf53a9c0fcfa6a03062", + "parent_gene": "", + "protein_md5": "7c2bd40b547c34e7576672f53fcb7652", + "protein_translation": "MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005326" + ], + [ + "gene_synonym", + "ECK1590" + ], + [ + "gene_synonym", + "EcoGene:EG13850" + ], + [ + "gene_synonym", + "GI:16129553" + ], + [ + "gene_synonym", + "GeneID:946136" + ], + [ + "gene_synonym", + "JW1587" + ], + [ + "gene_synonym", + "NP_416112.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77559" + ], + [ + "gene_synonym", + "b1595" + ], + [ + "gene_synonym", + "ynfL" + ] + ], + "dna_sequence": "ATGAATATTGAACTTCGTCATCTGCGTTACTTTGTTGCTGTTGCGGAAGAGCTGCATTTCGGGCGCGCCGCTGCCCGCCTGAATATTTCGCAACCGCCGCTAAGTCAGCAGATTCAGGCGCTGGAGCAACAAATTGGTGCCCGACTGCTGGCACGAACCAATCGCAGTGTATTGCTGACGGCAGCAGGAAAACAGTTTCTTGCAGATAGTCGGCAAATCCTGTCTATGGTGGATGACGCTGCCGCTCGCGCTGAAAGGCTGCATCAGGGTGAAGCGGGGGAGTTGCGCATTGGTTTTACTTCGTCGGCTCCTTTTATTCGGGCGGTGTCCGATACGTTATCGCTGTTTCGCCGTGATTATCCTGATGTCCATTTACAAACCCGCGAAATGAACACTCGCGAGCAAATCGCTCCGCTCATTGAAGGAACGCTGGATATGGGATTGCTGCGTAACACAGCGTTACCGGAGTCGCTTGAACACGCAGTCATCGTCCATGAACCGCTTATGGCGATGATCCCGCACGATCATCCCCTGGCAAATAACCCGAATGTAACGCTGGCTGAACTGGCGAAAGAACCCTTTGTCTTTTTTGATCCGCACGTCGGGACAGGGCTGTATGACGATATTCTCGGGCTGATGCGACGTTACCATTTGACGCCCGTCATCACTCAGGAGGTGGGCGAGGCAATGACCATCATCGGTCTGGTTTCCGCCGGTCTGGGTGTTTCAATTTTGCCTGCGTCATTTAAACGTGTTCAGCTCAACGAAATGCGCTGGGTGCCGATTGCTGAAGAGGATGCGGTTTCTGAAATGTGGTTGGTCTGGCCGAAACATCATGAACAAAGTCCGGCTGCGCGTAACTTTCGTATTCATCTGCTGAATGCTCTCAGGTGA", + "dna_sequence_length": 894, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_1583", + "location": [ + [ + "NC_000913", + 1669592, + "-", + 894 + ] + ], + "md5": "8497d88693f60d735d5e49643ac10b54", + "parent_gene": "", + "protein_md5": "fbbea5c7e18289e215c03dfc57c2d8b7", + "protein_translation": "MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPESLEHAVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGLGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005333" + ], + [ + "gene_synonym", + "ECK1591" + ], + [ + "gene_synonym", + "EcoGene:EG12951" + ], + [ + "gene_synonym", + "GI:16129554" + ], + [ + "gene_synonym", + "GeneID:946138" + ], + [ + "gene_synonym", + "JW1588" + ], + [ + "gene_synonym", + "NP_416113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43531" + ], + [ + "gene_synonym", + "b1596" + ], + [ + "gene_synonym", + "ynfM" + ], + [ + "gene_synonym", + "yzyC" + ] + ], + "dna_sequence": "GTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAACGCGGTACGCCGCAATTTATGCGCGTCACCCTGGCGCTGTTCTCTGCCGGACTGGCAACATTTGCACTTCTCTATTGTGTGCAGCCTATCCTTCCGGTGCTTTCGCAGGAGTTTGGCTTAACCCCCGCGAACAGTAGTATTTCACTGTCCATTTCCACGGCGATGTTGGCTATTGGTTTGCTGTTTACTGGCCCGCTATCCGATGCCATTGGTCGCAAACCAGTGATGGTCACGGCGCTACTGTTGGCCTCCATTTGTACGTTACTTTCGACAATGATGACCAGCTGGCACGGCATTTTGATTATGCGCGCCTTGATTGGGCTTTCGTTAAGTGGCGTGGCAGCTGTTGGCATGACTTATCTTAGCGAGGAAATCCATCCCAGTTTCGTGGCCTTTTCAATGGGGTTGTATATCAGCGGCAACTCAATTGGCGGCATGAGCGGACGCTTAATTAGCGGTGTCTTCACGGACTTTTTCAACTGGCGAATTGCTCTGGCGGCAATCGGTTGTTTCGCGCTGGCCTCGGCGTTGATGTTCTGGAAAATCCTCCCTGAATCACGCCATTTTCGCCCGACTTCGCTGCGCCCTAAGACGTTGTTTATCAACTTTCGTCTGCACTGGCGTGACCGGGGATTACCGTTATTGTTCGCAGAAGGCTTTTTGCTGATGGGGTCGTTCGTCACGCTGTTTAATTACATCGGCTATCGGTTGATGCTCTCCCCCTGGCATGTCAGTCAGGCCGTGGTTGGCTTATTATCGCTGGCTTATTTGACCGGTACATGGAGCTCACCCAAAGCCGGAACCATGACCACCCGCTATGGGCGTGGTCCAGTGATGTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTCAGTTACTATCTGGGGTCGAGTATTGCCGGGACGCTGGGTGGTGTTTTCTGGCATAACTATGGCTGGAACGGCGTCGGCGCATTTATTGCTCTGATGCTGGTCATTGCTCTGCTGGTCGGGACGCGTTTGCATCGTCGTCTGCACGCCTGA", + "dna_sequence_length": 1254, + "functions": [ + "putative arabinose efflux transporter" + ], + "id": "CDS_1584", + "location": [ + [ + "NC_000913", + 1669699, + "+", + 1254 + ] + ], + "md5": "faece37708e889a61e3224cd13f067b1", + "parent_gene": "", + "protein_md5": "9300086ad3c717009f35653346347f23", + "protein_translation": "MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFALASALMFWKILPESRHFRPTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGSFVTLFNYIGYRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGLLMTLFSSLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVFWHNYGWNGVGAFIALMLVIALLVGTRLHRRLHA", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005337" + ], + [ + "gene_synonym", + "ECK1592" + ], + [ + "gene_synonym", + "EcoGene:EG12149" + ], + [ + "gene_synonym", + "GI:90111305" + ], + [ + "gene_synonym", + "GeneID:945103" + ], + [ + "gene_synonym", + "JW5826" + ], + [ + "gene_synonym", + "NP_416114.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36560" + ], + [ + "gene_synonym", + "asr" + ], + [ + "gene_synonym", + "b1597" + ] + ], + "dna_sequence": "ATGAAAAAAGTATTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGGCGGCTAAAAAGCATCATAAAAATACGAAAGCTGAACAGAAAGCCCCTGAACAAAAAGCGCAGGCAGCGAAGAAACACGCCAAGAAACACAGCCATCAGCAACCGGCAAAACCTGCTGCACAACCCGCAGCGTAA", + "dna_sequence_length": 309, + "functions": [ + "acid shock-inducible periplasmic protein" + ], + "id": "CDS_1585", + "location": [ + [ + "NC_000913", + 1671376, + "+", + 309 + ] + ], + "md5": "70e586cab70835a2f495e0f57e187d90", + "parent_gene": "", + "protein_md5": "077a2fd4f8bd8e5f72835c06298ba240", + "protein_translation": "MKKVLALVVAAAMGLSSAAFAAETTTTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQPAKPAAQPAA", + "protein_translation_length": 102, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4410" + ], + [ + "gene_synonym", + "EcoGene:EG14462" + ], + [ + "gene_synonym", + "GI:145698267" + ], + [ + "gene_synonym", + "GeneID:5061510" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A617" + ], + [ + "gene_synonym", + "YP_001165320.1" + ], + [ + "gene_synonym", + "b4601" + ], + [ + "gene_synonym", + "ydgU" + ] + ], + "dna_sequence": "ATGGTGGGCCGTTATCGCTTTGAGTTCATTCTGATCATCCTTATTTTATGCGCACTGATTACCGCCCGTTTTTATCTTTCCTGA", + "dna_sequence_length": 84, + "functions": [ + "stationary phase-induced protein" + ], + "id": "CDS_1586", + "location": [ + [ + "NC_000913", + 1671777, + "+", + 84 + ] + ], + "md5": "65be4c44892ff509e4fa25f9e0c0694c", + "parent_gene": "", + "protein_md5": "7ca0937e55a48698d89f2c732218ac76", + "protein_translation": "MVGRYRFEFILIILILCALITARFYLS", + "protein_translation_length": 27, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005340" + ], + [ + "gene_synonym", + "ECK1593" + ], + [ + "gene_synonym", + "EcoGene:EG13925" + ], + [ + "gene_synonym", + "GI:16129556" + ], + [ + "gene_synonym", + "GeneID:946436" + ], + [ + "gene_synonym", + "JW1590" + ], + [ + "gene_synonym", + "NP_416115.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76176" + ], + [ + "gene_synonym", + "b1598" + ], + [ + "gene_synonym", + "ydgD" + ] + ], + "dna_sequence": "ATGCGTACAACCATTGCTGTAGTGTTGGGTGCAATTAGTTTGACGTCTGCTTTTGTGTTTGCAGATAAACCAGACGTTGCCAGATCGGCAAACGATGAGGTCAGCACCCTGTTTTTTGGTCATGATGATCGTGTGCCAGTGAATGACACGACCCAATCACCGTGGGATGCGGTTGGGCAACTGGAAACGGCCAGCGGCAATTTATGTACGGCGACGCTGATTGCACCCAATCTGGCATTAACGGCAGGACACTGTTTATTGACACCTCCAAAGGGTAAAGCCGATAAAGCAGTGGCGCTGCGTTTTGTGTCAAATAAAGGTCTTTGGCGCTATGAGATCCACGACATAGAAGGCCGCGTTGATCCGACACTGGGAAAGCGGTTAAAAGCAGATGGGGATGGTTGGATTGTACCTCCCGCAGCCGCGCCGTGGGACTTCGGATTGATTGTGCTACGTAATCCCCCTTCTGGCATTACGCCGTTGCCGTTATTTGAGGGAGATAAAGCCGCGCTTACCGCCGCATTAAAAGCGGCAGGTCGTAAAGTGACTCAGGCAGGCTACCCTGAAGATCATCTCGATACGTTGTACAGTCATCAAAACTGTGAAGTGACTGGCTGGGCGCAAACGTCGGTGATGTCACATCAGTGCGATACCTTGCCGGGTGACAGCGGTTCGCCTCTGATGTTGCATACCGATGACGGCTGGCAATTAATTGGGGTGCAAAGTTCGGCTCCTGCCGCGAAAGATCGCTGGCGCGCCGATAACCGGGCCATTTCTGTTACCGGTTTTCGCGACAAGCTGGATCAACTGTCGCAAAAATAA", + "dna_sequence_length": 822, + "functions": [ + "putative peptidase" + ], + "id": "CDS_1587", + "location": [ + [ + "NC_000913", + 1671960, + "+", + 822 + ] + ], + "md5": "bb4c44c33535dc352417b9e07e10875a", + "parent_gene": "", + "protein_md5": "4ddda3e85fa4e8e906a45c7ceaa30b88", + "protein_translation": "MRTTIAVVLGAISLTSAFVFADKPDVARSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005343" + ], + [ + "gene_synonym", + "ECK1594" + ], + [ + "gene_synonym", + "EcoGene:EG13926" + ], + [ + "gene_synonym", + "GI:16129557" + ], + [ + "gene_synonym", + "GeneID:947333" + ], + [ + "gene_synonym", + "JW1591" + ], + [ + "gene_synonym", + "NP_416116.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69210" + ], + [ + "gene_synonym", + "b1599" + ], + [ + "gene_synonym", + "mdtI" + ], + [ + "gene_synonym", + "ydgE" + ] + ], + "dna_sequence": "ATGGCGCAGTTTGAATGGGTTCACGCCGCCTGGCTGGCATTGGCAATCGTGCTGGAAATCGTTGCTAACGTCTTTTTGAAATTTTCTGACGGCTTTCGTCGCAAAATATTTGGCTTGCTCTCCCTGGCGGCGGTGCTGGCTGCCTTTAGTGCGCTTTCTCAAGCCGTTAAAGGGATCGACTTGTCTGTCGCTTATGCATTGTGGGGCGGGTTTGGTATTGCCGCCACGTTAGCCGCAGGTTGGATCTTGTTTGGTCAACGGTTAAATCGTAAAGGCTGGATTGGCCTGGTCTTGCTGTTGGCTGGAATGATCATGGTGAAACTTGCCTGA", + "dna_sequence_length": 330, + "functions": [ + "multidrug efflux system transporter" + ], + "id": "CDS_1588", + "location": [ + [ + "NC_000913", + 1673149, + "-", + 330 + ] + ], + "md5": "1bf40a8a0af5a3fd8e0239a5fb1a21f3", + "parent_gene": "", + "protein_md5": "ba3dc74f48fa2edfcfa472ce207310d8", + "protein_translation": "MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005345" + ], + [ + "gene_synonym", + "ECK1595" + ], + [ + "gene_synonym", + "EcoGene:EG13927" + ], + [ + "gene_synonym", + "GI:16129558" + ], + [ + "gene_synonym", + "GeneID:946139" + ], + [ + "gene_synonym", + "JW1592" + ], + [ + "gene_synonym", + "NP_416117.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69212" + ], + [ + "gene_synonym", + "b1600" + ], + [ + "gene_synonym", + "mdtJ" + ], + [ + "gene_synonym", + "ydgF" + ] + ], + "dna_sequence": "ATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGTGATGATTTCTCTGTCGTATATATTTCTCTCTTTCGCCGTTAAAAAAATCGCCTTAGGCGTAGCTTATGCGCTGTGGGAAGGTATCGGTATTTTATTTATTACCTTGTTTAGCGTTTTGTTATTCGACGAAAGTTTATCGCTGATGAAAATTGCCGGGTTAACCACCCTGGTCGCCGGGATTGTGTTGATAAAATCAGGTACCCGTAAAGCGCGTAAACCTGAACTGGAGGTGAACCATGGCGCAGTTTGA", + "dna_sequence_length": 366, + "functions": [ + "multidrug efflux system transporter" + ], + "id": "CDS_1589", + "location": [ + [ + "NC_000913", + 1673501, + "-", + 366 + ] + ], + "md5": "94a1f7e549491c9dfbe259581cfade63", + "parent_gene": "", + "protein_md5": "b5a4baf3fdd1848d2adfdb8aa5d83a74", + "protein_translation": "MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKARKPELEVNHGAV", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005350" + ], + [ + "gene_synonym", + "ECK1596" + ], + [ + "gene_synonym", + "EcoGene:EG13928" + ], + [ + "gene_synonym", + "GI:16129559" + ], + [ + "gene_synonym", + "GeneID:946142" + ], + [ + "gene_synonym", + "JW1593" + ], + [ + "gene_synonym", + "NP_416118.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS5" + ], + [ + "gene_synonym", + "b1601" + ], + [ + "gene_synonym", + "tqsA" + ], + [ + "gene_synonym", + "ydgG" + ] + ], + "dna_sequence": "ATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAATATTTTTATTGCTGCTGACGGTGCTGTTTATGCTGCTCGAAGTGCCACAATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACGAAGCGTTGCTGGTGCTGGCGGGATATCTGCTGATTAATCTGGTCTTCGGCAATATTCTGGAGCCGCGTATCATGGGGCGTGGGCTGGGGCTTTCCACATTGGTGGTATTTTTGTCGTTGATTTTTTGGGGATGGTTGTTAGGACCGGTGGGTATGCTGCTTTCCGTGCCGTTGACAATTATTGTCAAAATTGCGCTTGAACAAACAGCGGGAGGTCAAAGCATCGCCGTTCTGTTAAGCGATCTCAATAAAGAGTGA", + "dna_sequence_length": 1035, + "functions": [ + "pheromone AI-2 transporter" + ], + "id": "CDS_1590", + "location": [ + [ + "NC_000913", + 1673913, + "+", + 1035 + ] + ], + "md5": "4bac6856cc686ce2d4b8a3438dbf309a", + "parent_gene": "", + "protein_md5": "d99504d69de835a8516b33bbf623b36c", + "protein_translation": "MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSIAVLLSDLNKE", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005352" + ], + [ + "gene_synonym", + "ECK1597" + ], + [ + "gene_synonym", + "EcoGene:EG10745" + ], + [ + "gene_synonym", + "GI:16129560" + ], + [ + "gene_synonym", + "GeneID:946144" + ], + [ + "gene_synonym", + "JW1594" + ], + [ + "gene_synonym", + "NP_416119.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB67" + ], + [ + "gene_synonym", + "b1602" + ], + [ + "gene_synonym", + "pntB" + ] + ], + "dna_sequence": "ATGTCTGGAGGATTAGTTACAGCTGCATACATTGTTGCCGCGATCCTGTTTATCTTCAGTCTGGCCGGTCTTTCGAAACATGAAACGTCTCGCCAGGGTAACAACTTCGGTATCGCCGGGATGGCGATTGCGTTAATCGCAACCATTTTTGGACCGGATACGGGTAATGTTGGCTGGATCTTGCTGGCGATGGTCATTGGTGGGGCAATTGGTATCCGTCTGGCGAAGAAAGTTGAAATGACCGAAATGCCAGAACTGGTGGCGATCCTGCATAGCTTCGTGGGTCTGGCGGCAGTGCTGGTTGGCTTTAACAGCTATCTGCATCATGACGCGGGAATGGCACCGATTCTGGTCAATATTCACCTGACGGAAGTGTTCCTCGGTATCTTCATCGGGGCGGTAACGTTCACGGGTTCGGTGGTGGCGTTCGGCAAACTGTGTGGCAAGATTTCGTCTAAACCATTGATGCTGCCAAACCGTCACAAAATGAACCTGGCGGCTCTGGTCGTTTCCTTCCTGCTGCTGATTGTATTTGTTCGCACGGACAGCGTCGGCCTGCAAGTGCTGGCATTGCTGATAATGACCGCAATTGCGCTGGTATTCGGCTGGCATTTAGTCGCCTCCATCGGTGGTGCAGATATGCCAGTGGTGGTGTCGATGCTGAACTCGTACTCCGGCTGGGCGGCTGCGGCTGCGGGCTTTATGCTCAGCAACGACCTGCTGATTGTGACCGGTGCGCTGGTCGGTTCTTCGGGGGCTATCCTTTCTTACATTATGTGTAAGGCGATGAACCGTTCCTTTATCAGCGTTATTGCGGGTGGTTTCGGCACCGACGGCTCTTCTACTGGCGATGATCAGGAAGTGGGTGAGCACCGCGAAATCACCGCAGAAGAGACAGCGGAACTGCTGAAAAACTCCCATTCAGTGATCATTACTCCGGGGTACGGCATGGCAGTCGCGCAGGCGCAATATCCTGTCGCTGAAATTACTGAGAAATTGCGCGCTCGTGGTATTAATGTGCGTTTCGGTATCCACCCGGTCGCGGGGCGTTTGCCTGGACATATGAACGTATTGCTGGCTGAAGCAAAAGTACCGTATGACATCGTGCTGGAAATGGACGAGATCAATGATGACTTTGCTGATACCGATACCGTACTGGTGATTGGTGCTAACGATACGGTTAACCCGGCGGCGCAGGATGATCCGAAGAGTCCGATTGCTGGTATGCCTGTGCTGGAAGTGTGGAAAGCGCAGAACGTGATTGTCTTTAAACGTTCGATGAACACTGGCTATGCTGGTGTGCAAAACCCGCTGTTCTTCAAGGAAAACACCCACATGCTGTTTGGTGACGCCAAAGCCAGCGTGGATGCAATCCTGAAAGCTCTGTAA", + "dna_sequence_length": 1389, + "functions": [ + "pyridine nucleotide transhydrogenase, beta subunit" + ], + "id": "CDS_1591", + "location": [ + [ + "NC_000913", + 1676360, + "-", + 1389 + ] + ], + "md5": "32f9dae75eb95ccb45193c3db3bb86ae", + "parent_gene": "", + "protein_md5": "178bd59e4db9f686a6bf537347b3f52c", + "protein_translation": "MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL", + "protein_translation_length": 462, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005354" + ], + [ + "gene_synonym", + "ECK1598" + ], + [ + "gene_synonym", + "EcoGene:EG10744" + ], + [ + "gene_synonym", + "GI:16129561" + ], + [ + "gene_synonym", + "GeneID:946628" + ], + [ + "gene_synonym", + "JW1595" + ], + [ + "gene_synonym", + "NP_416120.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07001" + ], + [ + "gene_synonym", + "b1603" + ], + [ + "gene_synonym", + "pntA" + ] + ], + "dna_sequence": "ATGCGAATTGGCATACCAAGAGAACGGTTAACCAATGAAACCCGTGTTGCAGCAACGCCAAAAACAGTGGAACAGCTGCTGAAACTGGGTTTTACCGTCGCGGTAGAGAGCGGCGCGGGTCAACTGGCAAGTTTTGACGATAAAGCGTTTGTGCAAGCGGGCGCTGAAATTGTAGAAGGGAATAGCGTCTGGCAGTCAGAGATCATTCTGAAGGTCAATGCGCCGTTAGATGATGAAATTGCGTTACTGAATCCTGGGACAACGCTGGTGAGTTTTATCTGGCCTGCGCAGAATCCGGAATTAATGCAAAAACTTGCGGAACGTAACGTGACCGTGATGGCGATGGACTCTGTGCCGCGTATCTCACGCGCACAATCGCTGGACGCACTAAGCTCGATGGCGAACATCGCCGGTTATCGCGCCATTGTTGAAGCGGCACATGAATTTGGGCGCTTCTTTACCGGGCAAATTACTGCGGCCGGGAAAGTGCCACCGGCAAAAGTGATGGTGATTGGTGCGGGTGTTGCAGGTCTGGCCGCCATTGGCGCAGCAAACAGTCTCGGCGCGATTGTGCGTGCATTCGACACCCGCCCGGAAGTGAAAGAACAAGTTCAAAGTATGGGCGCGGAATTCCTCGAGCTGGATTTTAAAGAGGAAGCTGGCAGCGGCGATGGCTATGCCAAAGTGATGTCGGACGCGTTCATCAAAGCGGAAATGGAACTCTTTGCCGCCCAGGCAAAAGAGGTCGATATCATTGTCACCACCGCGCTTATTCCAGGCAAACCAGCGCCGAAGCTAATTACCCGTGAAATGGTTGACTCCATGAAGGCGGGCAGTGTGATTGTCGACCTGGCAGCCCAAAACGGCGGCAACTGTGAATACACCGTGCCGGGTGAAATCTTCACTACGGAAAATGGTGTCAAAGTGATTGGTTATACCGATCTTCCGGGCCGTCTGCCGACGCAATCCTCACAGCTTTACGGCACAAACCTCGTTAATCTGCTGAAACTGTTGTGCAAAGAGAAAGACGGCAATATCACTGTTGATTTTGATGATGTGGTGATTCGCGGCGTGACCGTGATCCGTGCGGGCGAAATTACCTGGCCGGCACCGCCGATTCAGGTATCAGCTCAGCCGCAGGCGGCACAAAAAGCGGCACCGGAAGTGAAAACTGAGGAAAAATGTACCTGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTGGCTTCACCGTGACTCAGCGCATGCTGAAAATGTTCCGCAAAAATTAA", + "dna_sequence_length": 1533, + "functions": [ + "pyridine nucleotide transhydrogenase, alpha subunit" + ], + "id": "CDS_1592", + "location": [ + [ + "NC_000913", + 1677903, + "-", + 1533 + ] + ], + "md5": "86fbaa6e89d9064ccfe6911a4c489b27", + "parent_gene": "", + "protein_md5": "65a238b0a6d1c0270925394ee285a3b7", + "protein_translation": "MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTEEKCTCSPWRKYALMALAIILFGWMASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN", + "protein_translation_length": 510, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005359" + ], + [ + "gene_synonym", + "ECK1599" + ], + [ + "gene_synonym", + "EcoGene:EG13929" + ], + [ + "gene_synonym", + "GI:16129562" + ], + [ + "gene_synonym", + "GeneID:945117" + ], + [ + "gene_synonym", + "JW1596" + ], + [ + "gene_synonym", + "NP_416121.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76177" + ], + [ + "gene_synonym", + "b1604" + ], + [ + "gene_synonym", + "ydgH" + ] + ], + "dna_sequence": "ATGAAGCTTAAGAACACCCTCCTGGCGTCGGCACTGCTTTCTGCTATGGCATTCTCCGTTAACGCAGCAACAGAACTGACACCGGAGCAAGCGGCAGCGGTTAAACCTTTTGACCGTGTAGTGGTTACCGGTCGTTTTAATGCTATTGGCGAAGCGGTGAAAGCCGTTTCTCGTCGCGCAGATAAAGAAGGTGCCGCCTCTTTTTATGTTGTCGACACTTCTGATTTTGGTAACAGCGGTAACTGGCGTGTGGTCGCTGACCTCTATAAAGCCGATGCTGAAAAAGCAGAAGAAACAAGTAATCGCGTAATTAACGGTGTTGTCGAACTGCCGAAAGATCAGGCTGTTCTGATTGAACCGTTTGACACGGTCACCGTCCAGGGCTTCTATCGTAGCCAGCCAGAAGTCAATGATGCCATCACCAAAGCGGCAAAAGCGAAAGGTGCCTACTCTTTCTACATCGTTCGTCAAATCGATGCCAACCAGGGCGGCAACCAGCGTATTACTGCATTCATCTATAAAAAAGATGCTAAGAAACGTATCGTCCAGAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGCGAAACGTGCCGCGAAGAAAGGTGCTAAGTATTACCACATCACCCGCCAGTGGCAGGAACGTGGTAATAACCTGACCGTCAGCGCAGATCTGTATAAATAA", + "dna_sequence_length": 945, + "functions": [ + "DUF1471 family periplasmic protein" + ], + "id": "CDS_1593", + "location": [ + [ + "NC_000913", + 1678427, + "+", + 945 + ] + ], + "md5": "64336b0bcf0fe10193496f645489846d", + "parent_gene": "", + "protein_md5": "9fad2f142923ce892e567411fd6817d6", + "protein_translation": "MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005362" + ], + [ + "gene_synonym", + "ECK1600" + ], + [ + "gene_synonym", + "EcoGene:EG13930" + ], + [ + "gene_synonym", + "GI:16129563" + ], + [ + "gene_synonym", + "GeneID:945159" + ], + [ + "gene_synonym", + "JW1597" + ], + [ + "gene_synonym", + "NP_416122.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAE5" + ], + [ + "gene_synonym", + "arcD" + ], + [ + "gene_synonym", + "b1605" + ], + [ + "gene_synonym", + "ydgI" + ] + ], + "dna_sequence": "ATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATAGTCGGTGCATCGGCTTTATTGTGGATTGTTCACTTTTTGATCCTGCGCGGGGTGCAAACCGCTGCCAGCATTAACCTGGTGGCGACACTGGCAAAATTGTTGCCGCTGGGTCTGTTTGTTGTGCTGGCGATGATGATGTTCAAACTGGATACCTTCAAGCTCGACTTCACCGGACTTGCACTTGGCGTACCCGTTTGGGAACAGGTGAAAAACACCATGCTGATCACCCTGTGGGTTTTCATTGGTGTGGAAGGTGCCGTGGTTGTTTCTGCGCGTGCGCGTAATAAACGTGATGTTGGCAAAGCGACACTGCTGGCGGTTCTCTCCGCTCTGGGCGTTTACTTGCTGGTAACGCTGCTTTCGCTGGGTGTGGTGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGACCATGGGGCGAAATCATCATCGCTGCCGGTTTGATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTACCGTTCCTGGCCGCCACTCATAAAGCATTCCCGCGCATTTTTGCGCGCCAGAACGCACAAGCTGCGCCATCCGCCTCACTGTGGTTGACCAACATCTGCGTGCAAATTTGTCTGGTACTCATCTGGCTGACCGGTTCCGATTACAACACGTTGCTGACCATCGCCTCAGAAATGATTCTGGTGCCCTATTTCCTGGTCGGCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGATAATGTACTGAACCGTCAGGAAATGGTGCTGATTGGCATGCTGTTAATTGCCTCAGTTCCGGCGACCTGGATGCTGGTGGGATAA", + "dna_sequence_length": 1383, + "functions": [ + "putative arginine/ornithine antiporter transporter" + ], + "id": "CDS_1594", + "location": [ + [ + "NC_000913", + 1679557, + "+", + 1383 + ] + ], + "md5": "8b982464d8a672f5661116cbc03251d3", + "parent_gene": "", + "protein_md5": "238a138012d05b6096abecddb1b9b465", + "protein_translation": "MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005364" + ], + [ + "gene_synonym", + "ECK1601" + ], + [ + "gene_synonym", + "EcoGene:EG13189" + ], + [ + "gene_synonym", + "GI:16129564" + ], + [ + "gene_synonym", + "GeneID:949096" + ], + [ + "gene_synonym", + "JW1598" + ], + [ + "gene_synonym", + "NP_416123.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS3" + ], + [ + "gene_synonym", + "b1606" + ], + [ + "gene_synonym", + "folM" + ], + [ + "gene_synonym", + "ydgB" + ] + ], + "dna_sequence": "ATGGGTAAAACCCAGCCCTTGCCAATATTAATTACTGGCGGAGGTCGTCGCATCGGCCTCGCCCTCGCATGGCATTTCATTAATCAAAAGCAACCGGTGATTGTCAGCTATCGGACACACTATCCAGCCATTGATGGACTGATTAATGCAGGTGCGCAGTGTATTCAGGCTGATTTTTCGACCAACGACGGTGTGATGGCGTTTGCCGATGAAGTACTAAAAAGCACCCATGGTCTGCGTGCTATTTTGCATAACGCCAGTGCGTGGATGGCGGAAAAACCGGGTGCGCCACTGGCCGACGTACTGGCTTGCATGATGCAGATCCACGTTAATACCCCATACCTGCTCAACCATGCGCTGGAAAGATTACTGCGTGGGCACGGACACGCCGCCAGCGATATCATTCACTTTACCGATTATGTGGTGGAGCGCGGTAGCGACAAACATATTGCGTATGCTGCAAGCAAAGCGGCACTGGATAATATGACCCGCTCGTTTGCCCGCAAGCTGGCACCGGAAGTGAAAGTGAATTCTATTGCGCCATCGCTGATCCTGTTTAATGAACATGATGATGCCGAATATCGACAACAGGCGCTGAATAAATCACTGATGAAAACCGCGCCTGGCGAGAAAGAAGTGATCGACCTGGTCGATTACTTACTTACCAGTTGCTTTGTCACCGGACGCAGTTTCCCACTTGATGGCGGTCGTCATCTGCGTTAA", + "dna_sequence_length": 723, + "functions": [ + "dihydromonapterin reductase, NADPH-dependent", + "dihydrofolate reductase isozyme" + ], + "id": "CDS_1595", + "location": [ + [ + "NC_000913", + 1680976, + "+", + 723 + ] + ], + "md5": "d1ebf81511d99da958cdeff8fa3745b3", + "parent_gene": "", + "protein_md5": "e24b22186b29bbe648b6dc199c53d44b", + "protein_translation": "MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005366" + ], + [ + "gene_synonym", + "ECK1602" + ], + [ + "gene_synonym", + "EcoGene:EG13191" + ], + [ + "gene_synonym", + "GI:16129565" + ], + [ + "gene_synonym", + "GeneID:945156" + ], + [ + "gene_synonym", + "JW1599" + ], + [ + "gene_synonym", + "NP_416124.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX0" + ], + [ + "gene_synonym", + "b1607" + ], + [ + "gene_synonym", + "ydgC" + ] + ], + "dna_sequence": "ATGGGGCTGGTAATCAAAGCCGCGCTCGGTGCGCTGGTAGTGCTGTTGATTGGTGTTTTAGCAAAAACGAAAAATTATTATATCGCCGGGCTGATTCCACTTTTCCCGACCTTTGCGCTTATCGCGCATTATATTGTTGCCAGCGAACGCGGCATTGAAGCCTTACGCGCAACCATCATTTTTAGTATGTGGTCGATTATTCCCTATTTTGTTTACCTGGTGTCGCTGTGGTATTTCACCGGAATGATGCGCTTGCCCGCCGCTTTTGTTGGTTCTGTTGCGTGTTGGGGGATAAGCGCATGGGTGTTGATTATATGCTGGATAAAGCTGCATTAA", + "dna_sequence_length": 336, + "functions": [ + "GlpM family inner membrane protein" + ], + "id": "CDS_1596", + "location": [ + [ + "NC_000913", + 1682030, + "-", + 336 + ] + ], + "md5": "02eb327c6107427668476cb8c04872e2", + "parent_gene": "", + "protein_md5": "b0b97b1fafbb337eb59c86e55531e4ce", + "protein_translation": "MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005370" + ], + [ + "gene_synonym", + "ECK1603" + ], + [ + "gene_synonym", + "EcoGene:EG13190" + ], + [ + "gene_synonym", + "GI:145698268" + ], + [ + "gene_synonym", + "GeneID:946199" + ], + [ + "gene_synonym", + "JW1600" + ], + [ + "gene_synonym", + "NP_416125.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52108" + ], + [ + "gene_synonym", + "b1608" + ], + [ + "gene_synonym", + "rstA" + ], + [ + "gene_synonym", + "urpT" + ] + ], + "dna_sequence": "ATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGAAACCATTTTGCGAGAAAATCCGGATTTGGTGTTACTCGACATCATGCTACCAGGCAAGGACGGCATGACCATTTGTCGTGATTTACGCGCAAAGTGGTCTGGACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTCTGACTCCCTACAAAGCCCTGCATTTCGGCACGTTGACCATCGATCCCATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGAATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGTGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCTTTTTGCGCCTCATGCATGGGAATAA", + "dna_sequence_length": 720, + "functions": [ + "response regulator of RstAB two-component system" + ], + "id": "CDS_1597", + "location": [ + [ + "NC_000913", + 1682159, + "+", + 720 + ] + ], + "md5": "6b2ecdfc54980e3a57d57eb531205faf", + "parent_gene": "", + "protein_md5": "d2bb197bf93306a063ee18864155420c", + "protein_translation": "MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005372" + ], + [ + "gene_synonym", + "ECK1604" + ], + [ + "gene_synonym", + "EcoGene:EG11233" + ], + [ + "gene_synonym", + "GI:16129567" + ], + [ + "gene_synonym", + "GeneID:948870" + ], + [ + "gene_synonym", + "JW1601" + ], + [ + "gene_synonym", + "NP_416126.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18392" + ], + [ + "gene_synonym", + "b1609" + ], + [ + "gene_synonym", + "rstB" + ], + [ + "gene_synonym", + "uspT" + ] + ], + "dna_sequence": "ATGAAAAAACTGTTTATCCAGTTTTACCTGTTATTGTTTGTCTGCTTCCTTGTGATGTCTCTGCTGGTTGGGCTGGTGTACAAATTTACCGCCGAACGCGCGGGCAAACAGTCGCTGGATGATTTGATGAACAGTTCGCTGTATCTGATGCGCAGCGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCCCGCGCAGCCACTACGTGCTGGCAGTTGGTCCTGTTCCTTATCTTTATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTATTTCCCTCGCCTTTCCGGTGTTTATCTGGATGCGTCCGCACTGGCAGGATATGTTAAAACTGGAAGCAGCGGCGCAACGATTTGGCGATGGGCATCTCAATGAACGTATCCACTTTGATGAGGGTTCGAGCTTTGAACGACTTGGCGTCGCATTTAACCAGATGGCGGACAATATCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCACGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTGGAGATGAGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGAAGAGCTGCTGACTTATGCCCGACTCGATCGCCCACAAAACGAGCTTCATCTTAGCGAACCAGACCTGCCGTTGTGGCTGTCAACGCATCTGGCAGATATTCAGGCAGTAACGCCCGATAAAACGGTACGGATAAAAACGCTCGTGCAAGGCCATTATGCGGCGTTGGATATGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGTCGGGGAATAGAGCGACATTAATTGTTGAGGATGATGGCCCAGGGATTGCCCCAGAAAACCGCGAACATATCTTTGAACCTTTTGTTCGCCTCGATCCCAGCCGGGATCGCTCAACCGGCGGCTGCGGGCTGGGGCTGGCAATTGTCCACTCTATAGCACTGGCAATGGGCGGTACGGTTAATTGTGACACCAGCGAACTGGGTGGTGCCCGCTTCTCGTTTAGCTGGCCGTTATGGCATAACATCCCGCAATTTACCTCTGCCTGA", + "dna_sequence_length": 1302, + "functions": [ + "sensory histidine kinase of RstAB two-component system" + ], + "id": "CDS_1598", + "location": [ + [ + "NC_000913", + 1682882, + "+", + 1302 + ] + ], + "md5": "929d7cd28505474e3c5321c5e74009b5", + "parent_gene": "", + "protein_md5": "67127f59391dbff93f94f064d696ee07", + "protein_translation": "MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVALDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPHWQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA", + "protein_translation_length": 433, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005378" + ], + [ + "gene_synonym", + "ECK1605" + ], + [ + "gene_synonym", + "EcoGene:EG11038" + ], + [ + "gene_synonym", + "GI:16129568" + ], + [ + "gene_synonym", + "GeneID:945135" + ], + [ + "gene_synonym", + "JW1602" + ], + [ + "gene_synonym", + "NP_416127.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16525" + ], + [ + "gene_synonym", + "b1610" + ], + [ + "gene_synonym", + "tau" + ], + [ + "gene_synonym", + "tus" + ] + ], + "dna_sequence": "ATGGCGCGTTACGATCTCGTAGACCGACTCAACACTACCTTTCGCCAGATGGAACAAGAGCTGGCTATATTTGCCGCTCATCTTGAGCAACACAAGCTATTGGTTGCCCGCGTGTTCTCTTTGCCGGAGGTAAAAAAAGAGGATGAGCATAATCCGCTTAATCGTATTGAGGTAAAACAACATCTCGGCAACGACGCGCAGTCGCTGGCGTTGCGTCATTTCCGCCATTTATTTATTCAACAACAGTCCGAAAATCGCAGCAGCAAGGCCGCTGTCCGTCTGCCTGGCGTGTTGTGTTACCAGGTCGATAACCTTTCGCAAGCAGCGTTGGTCAGTCATATTCAGCACATCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAATGGGTGCATCGTCATTTGCCGGGGCTGATCACCCTTAATGCTTACCGCACGCTCACCGTTCTGCACGACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGCGAGAGTATCAGGATATCGCTGCCCTGCCACAGAACGCGAAGTTAAAAATCAAACGTCCGGTGAAGGTGCAGCCGATTGCCCGCGTCTGGTACAAAGGAGATCAAAAACAAGTCCAACACGCCTGCCCTACACCACTGATTGCACTGATTAATCGGGATAATGGCGCGGGCGTGCCGGACGTTGGTGAGTTGTTAAATTACGATGCCGACAATGTGCAGCACCGTTATAAACCTCAGGCGCAGCCGCTTCGTTTGATCATTCCACGGCTGCACCTGTATGTTGCAGATTAA", + "dna_sequence_length": 930, + "functions": [ + "inhibitor of replication at Ter, DNA-binding protein" + ], + "id": "CDS_1599", + "location": [ + [ + "NC_000913", + 1684259, + "+", + 930 + ] + ], + "md5": "a3a785324053b7e09fb092dbb00fe46a", + "parent_gene": "", + "protein_md5": "ed59bcb1634167857e53e941bd9f3c73", + "protein_translation": "MARYDLVDRLNTTFRQMEQELAIFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005380" + ], + [ + "gene_synonym", + "ECK1606" + ], + [ + "gene_synonym", + "EcoGene:EG10358" + ], + [ + "gene_synonym", + "GI:16129569" + ], + [ + "gene_synonym", + "GeneID:946147" + ], + [ + "gene_synonym", + "JW1603" + ], + [ + "gene_synonym", + "NP_416128.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05042" + ], + [ + "gene_synonym", + "b1611" + ], + [ + "gene_synonym", + "fumC" + ] + ], + "dna_sequence": "ATGAATACAGTACGCAGCGAAAAAGATTCGATGGGGGCGATTGATGTCCCGGCAGATAAGCTGTGGGGCGCACAAACTCAACGCTCGCTGGAGCATTTCCGCATTTCGACGGAGAAAATGCCCACCTCACTGATTCATGCGCTGGCGCTAACCAAGCGTGCAGCGGCAAAAGTTAATGAAGATTTAGGCTTGTTGTCTGAAGAGAAAGCGAGCGCCATTCGTCAGGCGGCGGATGAAGTACTGGCAGGACAGCATGACGACGAATTCCCGCTGGCTATCTGGCAGACCGGCTCCGGCACGCAAAGTAACATGAACATGAACGAAGTGCTGGCTAACCGGGCCAGTGAATTACTCGGCGGTGTGCGCGGGATGGAACGTAAAGTTCACCCTAACGACGACGTGAACAAAAGCCAAAGTTCCAACGATGTCTTTCCGACGGCGATGCACGTTGCGGCGCTGCTGGCGCTGCGCAAGCAACTCATTCCTCAGCTTAAAACCCTGACACAGACACTGAATGAGAAATCCCGTGCTTTTGCCGATATCGTCAAAATTGGTCGTACTCACTTGCAGGATGCCACGCCGTTAACGCTGGGGCAGGAGATTTCCGGCTGGGTAGCGATGCTCGAGCATAATCTCAAACATATCGAATACAGCCTGCCTCACGTAGCGGAACTGGCTCTTGGCGGTACAGCGGTGGGTACTGGACTAAATACCCATCCGGAGTATGCGCGTCGCGTAGCAGATGAACTGGCAGTCATTACCTGTGCACCGTTTGTTACCGCGCCGAACAAATTTGAAGCGCTGGCGACCTGTGATGCCCTGGTTCAGGCGCACGGCGCGTTGAAAGGGTTGGCTGCGTCACTGATGAAAATCGCCAATGATGTCCGCTGGCTGGCCTCTGGCCCGCGCTGCGGAATTGGTGAAATCTCAATCCCGGAAAATGAGCCGGGCAGCTCAATCATGCCGGGGAAAGTGAACCCAACACAGTGTGAGGCATTAACCATGCTCTGCTGTCAGGTGATGGGGAACGACGTGGCGATCAACATGGGGGGCGCTTCCGGTAACTTTGAACTGAACGTCTTCCGTCCAATGGTGATCCACAATTTCCTGCAATCGGTGCGCTTGCTGGCAGATGGCATGGAAAGTTTTAACAAACACTGCGCAGTGGGTATTGAACCGAATCGTGAGCGAATCAATCAATTACTCAATGAATCGCTGATGCTGGTGACTGCGCTTAACACCCACATTGGTTATGACAAAGCCGCCGAGATCGCCAAAAAAGCGCATAAAGAAGGGCTGACCTTAAAAGCTGCGGCCCTTGCGCTGGGGTATCTTAGCGAAGCCGAGTTTGACAGCTGGGTACGGCCAGAACAGATGGTCGGCAGTATGAAAGCCGGGCGTTAA", + "dna_sequence_length": 1404, + "functions": [ + "fumarate hydratase (fumarase C),aerobic Class II" + ], + "id": "CDS_1600", + "location": [ + [ + "NC_000913", + 1686588, + "-", + 1404 + ] + ], + "md5": "49cf8c90e7755068a1398cd2e2e8fc7e", + "parent_gene": "", + "protein_md5": "ba9ea4f2a2bede4d365c5a32e4fd7009", + "protein_translation": "MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSMKAGR", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005392" + ], + [ + "gene_synonym", + "ECK1607" + ], + [ + "gene_synonym", + "EcoGene:EG10356" + ], + [ + "gene_synonym", + "GI:16129570" + ], + [ + "gene_synonym", + "GeneID:946826" + ], + [ + "gene_synonym", + "JW1604" + ], + [ + "gene_synonym", + "NP_416129.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC33" + ], + [ + "gene_synonym", + "b1612" + ], + [ + "gene_synonym", + "fumA" + ] + ], + "dna_sequence": "ATGTCAAACAAACCCTTTCATTATCAGGCTCCTTTTCCACTCAAAAAAGATGATACTGAGTATTACCTGCTAACCAGCGAACACGTTAGCGTATCTGAATTTGAAGGGCAGGAGATTTTGAAAGTCGCACCCGAAGCGTTAACTCTGTTGGCGCGCCAGGCGTTTCATGATGCGTCGTTCATGCTGCGTCCGGCGCACCAACAACAGGTGGCCGACATTCTGCGTGACCCGGAGGCCAGCGAAAATGATAAATATGTGGCGCTGCAATTCCTGCGTAACTCCGACATCGCGGCGAAAGGCGTTCTGCCAACCTGTCAGGATACCGGCACCGCGATTATTGTTGGTAAAAAAGGGCAGCGTGTATGGACCGGTGGTGGTGATGAAGCGGCGCTGGCGCGCGGTGTCTATAACACTTATATCGAAGATAATCTGCGCTACTCGCAAAACGCGCCGCTGGATATGTATAAAGAAGTGAATACCGGCACCAATCTGCCAGCGCAGATCGATCTTTATGCCGTTGATGGCGACGAATACAAATTCCTCTGTATCGCCAAAGGTGGTGGTTCGGCAAACAAGACGTATCTCTATCAGGAAACCAAAGCGTTACTGACGCCGGGGAAACTGAAAAATTACCTGGTTGAGAAGATGCGCACGCTGGGTACGGCGGCCTGTCCTCCGTATCATATTGCGTTCGTTATTGGTGGAACTTCTGCAGAAACGAACCTTAAAACGGTGAAACTGGCTTCCGCGAAATACTATGATGAACTGCCAACGGAAGGGAATGAGCACGGTCAGGCGTTCCGCGATGTGGAACTGGAAAAAGAATTGCTGATCGAAGCGCAAAATCTTGGTCTGGGTGCGCAGTTTGGTGGTAAATACTTCGCTCACGACATCCGCGTGATTCGCCTGCCACGTCACGGCGCATCCTGCCCGGTCGGTATGGGCGTCTCCTGCTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATCCAGGCAAATATATCCCGGAAGAGCTGCGCAAAGCGGGAGAAGGCGAAGCGGTGCGCGTTGACCTTAACCGTCCGATGAAAGAGATCCTCGCACAGTTGTCGCAGTATCCCGTTTCTACACGCTTATCGCTTAACGGCACGATTATCGTCGGTCGTGATATTGCTCACGCCAAACTGAAAGAGCGGATGGATAACGGTGAAGGGCTGCCGCAGTACATCAAAGATCATCCGATTTACTACGCGGGTCCGGCCAAAACGCCGGAAGGTTATGCCTCCGGTTCTCTTGGCCCAACGACCGCCGGACGGATGGATTCTTATGTCGATCAACTGCAAGCGCAGGGCGGAAGTATGATCATGCTGGCGAAAGGCAACCGCAGCCAGCAGGTGACGGATGCCTGTAAAAAACACGGCGGCTTCTACCTTGGCAGTATCGGTGGTCCGGCCGCTGTATTGGCGCAGGGAAGTATTAAGAGCCTGGAATGTGTTGAATATCCGGAACTGGGAATGGAAGCCATCTGGAAAATTGAAGTGGAAGATTTCCCGGCGTTTATCCTTGTGGATGATAAAGGAAATGACTTCTTCCAGCAGATACAACTCACACAATGCACCCGCTGTGTGAAATAA", + "dna_sequence_length": 1647, + "functions": [ + "fumarate hydratase (fumarase A), aerobic Class I" + ], + "id": "CDS_1601", + "location": [ + [ + "NC_000913", + 1688377, + "-", + 1647 + ] + ], + "md5": "8d1c5caf0ec982e11511d32274ceb34d", + "parent_gene": "", + "protein_md5": "de6f60430b310db5b498f9c0d4a4d943", + "protein_translation": "MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAPEALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVLPTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKELLIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIWIEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQLQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005398" + ], + [ + "gene_synonym", + "ECK1608" + ], + [ + "gene_synonym", + "EcoGene:EG10566" + ], + [ + "gene_synonym", + "GI:49176125" + ], + [ + "gene_synonym", + "GeneID:944840" + ], + [ + "gene_synonym", + "JW1605" + ], + [ + "gene_synonym", + "NP_416130.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00946" + ], + [ + "gene_synonym", + "b1613" + ], + [ + "gene_synonym", + "manA" + ], + [ + "gene_synonym", + "pmi" + ] + ], + "dna_sequence": "ATGCAAAAACTCATTAACTCAGTGCAAAACTATGCCTGGGGCAGCAAAACGGCGTTGACTGAACTTTATGGTATGGAAAATCCGTCCAGCCAGCCGATGGCCGAGCTGTGGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACTGCGTGATGTGATTGAGAGTGATAAATCGACTCTGCTCGGAGAGGCCGTTGCCAAACGCTTTGGCGAACTGCCTTTCCTGTTCAAAGTATTATGCGCAGCACAGCCACTCTCCATTCAGGTTCATCCAAACAAACACAATTCTGAAATCGGTTTTGCCAAAGAAAATGCCGCAGGTATCCCGATGGATGCCGCCGAGCGTAACTATAAAGATCCTAACCACAAGCCGGAGCTGGTTTTTGCGCTGACGCCTTTCCTTGCGATGAACGCGTTTCGTGAATTTTCCGAGATTGTCTCCCTACTCCAGCCGGTCGCAGGTGCACATCCGGCGATTGCTCACTTTTTACAACAGCCTGATGCCGAACGTTTAAGCGAACTGTTCGCCAGCCTGTTGAATATGCAGGGTGAAGAAAAATCCCGCGCGCTGGCGATTTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTAACCAGTTGTTGACCCAGCCGGTGAAACAAGGTGCAGAACTGGACTTCCCGATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCCAGCAGAGTGCCGCCATTTTGTTCTGCGTCGAAGGCGATGCAACGTTGTGGAAAGGTTCTCAGCAGTTACAGCTTAAACCGGGTGAATCAGCGTTTATTGCCGCCAACGAATCACCGGTGACTGTCAAAGGCCACGGCCGTTTAGCGCGTGTTTACAACAAGCTGTAA", + "dna_sequence_length": 1176, + "functions": [ + "mannose-6-phosphate isomerase" + ], + "id": "CDS_1602", + "location": [ + [ + "NC_000913", + 1688576, + "+", + 1176 + ] + ], + "md5": "5cb937ad6cf1862a4b0e92db990c1a2a", + "parent_gene": "", + "protein_md5": "db79e4dbecd21e0c3a7736850a23e810", + "protein_translation": "MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNKHNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQPVAGAHPAIAHFLQQPDAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIRLISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETTISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL", + "protein_translation_length": 391, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005402" + ], + [ + "gene_synonym", + "ECK1609" + ], + [ + "gene_synonym", + "EcoGene:EG12457" + ], + [ + "gene_synonym", + "GI:16129572" + ], + [ + "gene_synonym", + "GeneID:946172" + ], + [ + "gene_synonym", + "JW1606" + ], + [ + "gene_synonym", + "NP_416131.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77804" + ], + [ + "gene_synonym", + "b1614" + ], + [ + "gene_synonym", + "ydgA" + ] + ], + "dna_sequence": "ATGAATAAATCGCTGGTAGCGGTAGGCGTCATTGTTGCGCTAGGCGTAGTCTGGACAGGCGGCGCATGGTATACAGGCAAGAAGATTGAAACCCATCTCGAAGACATGGTCGCGCAGGCGAACGCGCAACTCAAACTGACAGCTCCTGAATCCAACCTGGAAGTGAGTTATCAAAACTATCATCGCGGCGTATTCAGCAGCCAGTTGCAACTGTTGGTGAAACCCATTGCCGGGAAAGAAAATCCGTGGATTAAAAGCGGTCAGAGCGTCATCTTCAACGAATCGGTTGATCATGGTCCCTTCCCGCTTGCCCAGCTTAAAAAACTGAACCTGATCCCGTCGATGGCATCAATTCAAACCACGCTGGTTAATAACGAAGTAAGCAAACCACTGTTTGATATGGCAAAAGGTGAAACGCCTTTTGAGATTAACTCGCGCATTGGTTACAGCGGTGATTCCAGTTCCGATATTTCGCTCAAGCCACTGAATTACGAGCAAAAGGATGAAAAAGTCGCCTTTAGCGGCGGCGAGTTCCAGTTAAATGCTGACAGAGACGGCAAAGCCATCTCCCTTTCCGGGGAGGCGCAAAGTGGTCGGATAGACGCAGTTAACGAATACAACCAGAAAGTGCAGTTGACCTTTAATAATCTGAAAACCGACGGTTCCAGCACGCTGGCAAGTTTTGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTGGAAGGCATGGAGATCAGCGGTAAATCGGATCTGGTCAATGACGGTAAAACGATCAATAGCCAACTGGATTACTCGCTAAACAGCCTGAAGGTACAGAATCAGGATCTGGGCAGCGGCAAGCTGACTTTAAAAGTCGGCCAGATTGATGGTGAAGCCTGGCATCAGTTTAGCCAGCAATATAACGCGCAAACTCAGGCGCTGCTGGCACAGCCAGAAATTGCCAACAACCCCGAACTTTATCAGGAGAAAGTGACGGAAGCCTTCTTTAGCGCCCTGCCGCTGATGCTGAAAGGCGATCCGGTGATTACTATCGCGCCGCTAAGCTGGAAAAACAGTCAGGGTGAAAGTGCCCTGAATCTGTCGCTGTTCCTGAAAGATCCGGCAACGACTAAAGAAGCGCCGCAAACGCTGGCGCAGGAAGTAGATCGTTCGGTTAAATCTCTGGATGCGAAACTGACCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAATGGGGCAGATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAA", + "dna_sequence_length": 1509, + "functions": [ + "DUF945 family protein" + ], + "id": "CDS_1603", + "location": [ + [ + "NC_000913", + 1689852, + "+", + 1509 + ] + ], + "md5": "a53996bcd7bdba72d4eaf77d63897ec0", + "parent_gene": "", + "protein_md5": "afca01a8a5abfff6100aea5004d46e3f", + "protein_translation": "MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ", + "protein_translation_length": 502, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005405" + ], + [ + "gene_synonym", + "ECK1610" + ], + [ + "gene_synonym", + "EcoGene:EG12668" + ], + [ + "gene_synonym", + "GI:90111306" + ], + [ + "gene_synonym", + "GeneID:944820" + ], + [ + "gene_synonym", + "JW1607" + ], + [ + "gene_synonym", + "NP_416132.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47706" + ], + [ + "gene_synonym", + "b1615" + ], + [ + "gene_synonym", + "gusC" + ], + [ + "gene_synonym", + "uidC" + ] + ], + "dna_sequence": "ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTATGCGGCGCAACTGGCTGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCGGATAAGCCCAGTGCTGGCGCGGGAAGAGATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGGGCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTTTGCCCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTTAAATTAGGTCGCTTCGGGACGGATTATAGTTATGGTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGTTATTGGGCTTTAACACCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACTGATTCAACAACCGGTATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACATCGCGCACGTTCTTTTTTAGCCGCCAGTTGGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTTTCCAATCAGATACAAAGTATTCTCGAGAAAAGCATACCGCTCGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCGTAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGTGTATTTGGCAGTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGATCGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGCGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACCGATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCACGGGTATCTTAGGTGGTATGAACTATCGGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTACGCTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA", + "dna_sequence_length": 1266, + "functions": [ + "putative outer membrane porin for beta-glucuronides porin protein" + ], + "id": "CDS_1604", + "location": [ + [ + "NC_000913", + 1692851, + "-", + 1266 + ] + ], + "md5": "31b5a9c5a588fe1e65aea70083a3269e", + "parent_gene": "", + "protein_md5": "dc8b165e7badb22c0cd706d28f26db24", + "protein_translation": "MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFMLK", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005407" + ], + [ + "gene_synonym", + "ECK1611" + ], + [ + "gene_synonym", + "EcoGene:EG11658" + ], + [ + "gene_synonym", + "GI:16129574" + ], + [ + "gene_synonym", + "GeneID:947484" + ], + [ + "gene_synonym", + "JW1608" + ], + [ + "gene_synonym", + "NP_416133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE44" + ], + [ + "gene_synonym", + "b1616" + ], + [ + "gene_synonym", + "gusB" + ], + [ + "gene_synonym", + "uidB" + ], + [ + "gene_synonym", + "uidP" + ] + ], + "dna_sequence": "ATGAATCAACAACTCTCCTGGCGCACCATCGTCGGCTACAGCCTCGGTGACGTCGCCAATAACTTCGCCTTCGCAATGGGGGCGCTCTTCCTGTTGAGTTACTACACCGACGTCGCTGGCGTCGGTGCCGCTGCGGCGGGCACCATGCTGTTACTGGTGCGGGTATTCGATGCCTTCGCCGACGTCTTTGCCGGACGAGTGGTGGACAGTGTGAATACCCGCTGGGGAAAATTCCGCCCGTTTTTACTCTTCGGTACTGCGCCGTTAATGATCTTCAGCGTGCTGGTATTCTGGGTGCTGACCGACTGGAGCCATGGTAGCAAAGTGGTGTATGCATATTTGACCTACATGGGCCTCGGGCTTTGCTACAGCCTGGTGAATATTCCTTATGGTTCACTTGCTACCGCGATGACCCAACAACCACAATCCCGCGCCCGTCTGGGCGCGGCTCGTGGGATTGCCGCTTCATTGACCTTTGTCTGCCTGGCATTTCTGATAGGACCGAGCATTAAGAACTCCAGCCCGGAAGAGATGGTGTCGGTATACCATTTCTGGACAATTGTGCTGGCGATTGCCGGAATGGTGCTTTACTTCATCTGCTTCAAATCGACGCGTGAGAATGTGGTACGTATCGTTGCGCAGCCGTCATTGAATATCAGTCTGCAAACCCTGAAACGGAATCGCCCGCTGTTTATGTTGTGCATCGGTGCGCTGTGTGTGCTGATTTCGACCTTTGCGGTCAGCGCCTCGTCGTTGTTCTACGTGCGCTATGTGTTAAATGATACCGGGCTGTTCACTGTGCTGGTACTGGTGCAAAACCTGGTTGGTACTGTGGCATCGGCACCGCTGGTGCCGGGGATGGTCGCGAGGATCGGTAAAAAGAATACCTTCCTGATTGGCGCTTTGCTGGGAACCTGCGGTTATCTGCTGTTCTTCTGGGTTTCCGTCTGGTCACTGCCGGTGGCGTTGGTTGCGTTGGCCATCGCTTCAATTGGTCAGGGCGTTACCATGACCGTGATGTGGGCGCTGGAAGCTGATACCGTAGAATACGGTGAATACCTGACCGGCGTGCGAATTGAAGGGCTCACCTATTCACTATTCTCATTTACCCGTAAATGCGGTCAGGCAATCGGAGGTTCAATTCCTGCCTTTATTTTGGGGTTAAGCGGATATATCGCCAATCAGGTGCAAACGCCGGAAGTTATTATGGGCATCCGCACATCAATTGCCTTAGTACCTTGCGGATTTATGCTACTGGCATTCGTTATTATCTGGTTTTATCCGCTCACGGATAAAAAATTCAAAGAAATCGTGGTTGAAATTGATAATCGTAAAAAAGTGCAGCAGCAATTAATCAGCGATATCACTAATTAA", + "dna_sequence_length": 1374, + "functions": [ + "glucuronide transporter" + ], + "id": "CDS_1605", + "location": [ + [ + "NC_000913", + 1694263, + "-", + 1374 + ] + ], + "md5": "0777bf53df6ff8c46bdc4ef10472e0e9", + "parent_gene": "", + "protein_md5": "7582ee621638d65139cf1e0ea57b5e5a", + "protein_translation": "MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005410" + ], + [ + "gene_synonym", + "ECK1612" + ], + [ + "gene_synonym", + "EcoGene:EG11055" + ], + [ + "gene_synonym", + "GI:16129575" + ], + [ + "gene_synonym", + "GeneID:946149" + ], + [ + "gene_synonym", + "JW1609" + ], + [ + "gene_synonym", + "NP_416134.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05804" + ], + [ + "gene_synonym", + "b1617" + ], + [ + "gene_synonym", + "gurA" + ], + [ + "gene_synonym", + "gusA" + ], + [ + "gene_synonym", + "uidA" + ] + ], + "dna_sequence": "ATGTTACGTCCTGTAGAAACCCCAACCCGTGAAATCAAAAAACTCGACGGCCTGTGGGCATTCAGTCTGGATCGCGAAAACTGTGGAATTGATCAGCGTTGGTGGGAAAGCGCGTTACAAGAAAGCCGGGCAATTGCTGTGCCAGGCAGTTTTAACGATCAGTTCGCCGATGCAGATATTCGTAATTATGCGGGCAACGTCTGGTATCAGCGCGAAGTCTTTATACCGAAAGGTTGGGCAGGCCAGCGTATCGTGCTGCGTTTCGATGCGGTCACTCATTACGGCAAAGTGTGGGTCAATAATCAGGAAGTGATGGAGCATCAGGGCGGCTATACGCCATTTGAAGCCGATGTCACGCCGTATGTTATTGCCGGGAAAAGTGTACGTATCACCGTTTGTGTGAACAACGAACTGAACTGGCAGACTATCCCGCCGGGAATGGTGATTACCGACGAAAACGGCAAGAAAAAGCAGTCTTACTTCCATGATTTCTTTAACTATGCCGGGATCCATCGCAGCGTAATGCTCTACACCACGCCGAACACCTGGGTGGACGATATCACCGTGGTGACGCATGTCGCGCAAGACTGTAACCACGCGTCTGTTGACTGGCAGGTGGTGGCCAATGGTGATGTCAGCGTTGAACTGCGTGATGCGGATCAACAGGTGGTTGCAACTGGACAAGGCACTAGCGGGACTTTGCAAGTGGTGAATCCGCACCTCTGGCAACCGGGTGAAGGTTATCTCTATGAACTGTGCGTCACAGCCAAAAGCCAGACAGAGTGTGATATCTACCCGCTTCGCGTCGGCATCCGGTCAGTGGCAGTGAAGGGCGAACAGTTCCTGATTAACCACAAACCGTTCTACTTTACTGGCTTTGGTCGTCATGAAGATGCGGACTTGCGTGGCAAAGGATTCGATAACGTGCTGATGGTGCACGACCACGCATTAATGGACTGGATTGGGGCCAACTCCTACCGTACCTCGCATTACCCTTACGCTGAAGAGATGCTCGACTGGGCAGATGAACATGGCATCGTGGTGATTGATGAAACTGCTGCTGTCGGCTTTAACCTCTCTTTAGGCATTGGTTTCGAAGCGGGCAACAAGCCGAAAGAACTGTACAGCGAAGAGGCAGTCAACGGGGAAACTCAGCAAGCGCACTTACAGGCGATTAAAGAGCTGATAGCGCGTGACAAAAACCACCCAAGCGTGGTGATGTGGAGTATTGCCAACGAACCGGATACCCGTCCGCAAGGTGCACGGGAATATTTCGCGCCACTGGCGGAAGCAACGCGTAAACTCGACCCGACGCGTCCGATCACCTGCGTCAATGTAATGTTCTGCGACGCTCACACCGATACCATCAGCGATCTCTTTGATGTGCTGTGCCTGAACCGTTATTACGGATGGTATGTCCAAAGCGGCGATTTGGAAACGGCAGAGAAGGTACTGGAAAAAGAACTTCTGGCCTGGCAGGAGAAACTGCATCAGCCGATTATCATCACCGAATACGGCGTGGATACGTTAGCCGGGCTGCACTCAATGTACACCGACATGTGGAGTGAAGAGTATCAGTGTGCATGGCTGGATATGTATCACCGCGTCTTTGATCGCGTCAGCGCCGTCGTCGGTGAACAGGTATGGAATTTCGCCGATTTTGCGACCTCGCAAGGCATATTGCGCGTTGGCGGTAACAAGAAAGGGATCTTCACTCGCGACCGCAAACCGAAGTCGGCGGCTTTTCTGCTGCAAAAACGCTGGACTGGCATGAACTTCGGTGAAAAACCGCAGCAGGGAGGCAAACAATGA", + "dna_sequence_length": 1812, + "functions": [ + "beta-D-glucuronidase" + ], + "id": "CDS_1606", + "location": [ + [ + "NC_000913", + 1696071, + "-", + 1812 + ] + ], + "md5": "1c5b8351d9360624d157b5e2d8629dbe", + "parent_gene": "", + "protein_md5": "5b25acdbb852875b8f9b741f45e11918", + "protein_translation": "MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADIRNYAGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYFHDFFNYAGIHRSVMLYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ", + "protein_translation_length": 603, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005415" + ], + [ + "gene_synonym", + "ECK1613" + ], + [ + "gene_synonym", + "EcoGene:EG12667" + ], + [ + "gene_synonym", + "GI:16129576" + ], + [ + "gene_synonym", + "GeneID:946150" + ], + [ + "gene_synonym", + "JW1610" + ], + [ + "gene_synonym", + "NP_416135.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACT6" + ], + [ + "gene_synonym", + "b1618" + ], + [ + "gene_synonym", + "gusR" + ], + [ + "gene_synonym", + "uidR" + ] + ], + "dna_sequence": "ATGATGGATAACATGCAGACTGAAGCACAACCGACACGGACCCGGATCCTCAATGCTGCCAGAGAGATTTTTTCAGAAAATGGATTTCACAGTGCCTCGATGAAAGCCATCTGTAAATCTTGCGCCATTAGTCCCGGGACGCTCTATCACCATTTCATCTCCAAAGAAGCCTTGATTCAGGCGATTATCTTACAGGACCAGGAGAGGGCGCTGGCCCGTTTCCGGGAACCGATTGAAGGGATTCATTTCGTTGACTATATGGTCGAGTCCATTGTCTCTCTCACCCATGAAGCCTTTGGACAACGGGCGCTGGTGGTTGAAATTATGGCGGAAGGGATGCGTAACCCACAGGTCGCCGCCATGCTTAAAAATAAGCATATGACGATCACGGAATTTGTTGCCCAGCGGATGCGTGATGCCCAGCAAAAAGGCGAGATAAGCCCAGACATCAACACGGCAATGACTTCACGTTTACTGCTGGATCTGACCTACGGTGTACTGGCCGATATCGAAGCGGAAGACCTGGCGCGTGAAGCGTCGTTTGCTCAGGGATTACGCGCGATGATTGGCGGTATCTTAACCGCATCCTGA", + "dna_sequence_length": 591, + "functions": [ + "transcriptional repressor" + ], + "id": "CDS_1607", + "location": [ + [ + "NC_000913", + 1697052, + "-", + 591 + ] + ], + "md5": "7bc75c7d88a11d04d41656d5aadcbfed", + "parent_gene": "", + "protein_md5": "b2c1e30af19fa40e5767bc8668149a38", + "protein_translation": "MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005419" + ], + [ + "gene_synonym", + "ECK1614" + ], + [ + "gene_synonym", + "EcoGene:EG10425" + ], + [ + "gene_synonym", + "GI:16129577" + ], + [ + "gene_synonym", + "GeneID:946151" + ], + [ + "gene_synonym", + "JW1611" + ], + [ + "gene_synonym", + "NP_416136.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AET8" + ], + [ + "gene_synonym", + "b1619" + ], + [ + "gene_synonym", + "hdhA" + ], + [ + "gene_synonym", + "hsd" + ], + [ + "gene_synonym", + "hsdH" + ] + ], + "dna_sequence": "GTGTTTAATTCTGACAACCTGAGACTCGACGGAAAATGCGCCATCATCACAGGTGCGGGTGCAGGTATTGGTAAAGAAATCGCCATTACATTCGCGACAGCTGGCGCATCTGTGGTGGTCAGTGATATTAACGCCGACGCAGCTAACCATGTTGTAGACGAAATTCAACAACTGGGTGGTCAGGCATTTGCCTGCCGTTGTGATATTACTTCCGAACAGGAACTCTCTGCACTGGCAGACTTTGCTATCAGTAAGCTGGGTAAAGTTGATATTCTGGTTAACAACGCCGGTGGCGGTGGACCTAAACCGTTTGATATGCCAATGGCGGATTTTCGCCGTGCTTATGAACTGAATGTGTTTTCTTTTTTCCATCTGTCACAACTTGTTGCGCCAGAAATGGAAAAAAATGGCGGTGGCGTTATTCTGACCATCACTTCTATGGCGGCAGAAAATAAAAATATAAACATGACTTCCTATGCATCATCTAAAGCTGCGGCCAGTCATCTGGTCAGAAATATGGCGTTTGACCTGGGTGAAAAAAATATTCGGGTAAATGGCATTGCGCCGGGGGCAATATTAACCGATGCCCTGAAATCCGTTATTACACCAGAAATTGAACAAAAAATGTTACAGCACACGCCGATCAGACGTCTGGGCCAACCGCAAGATATTGCTAACGCAGCGCTGTTCCTTTGCTCGCCTGCTGCGAGCTGGGTAAGCGGACAAATTCTCACCGTCTCCGGTGGTGGGGTACAGGAGCTCAATTAA", + "dna_sequence_length": 768, + "functions": [ + "7-alpha-hydroxysteroid dehydrogenase, NAD-dependent" + ], + "id": "CDS_1608", + "location": [ + [ + "NC_000913", + 1698040, + "-", + 768 + ] + ], + "md5": "ceb8151f93d873b228003dcd718103ef", + "parent_gene": "", + "protein_md5": "83d458c1eb11cb0d156ba66b398fdfab", + "protein_translation": "MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005421" + ], + [ + "gene_synonym", + "ECK1615" + ], + [ + "gene_synonym", + "EcoGene:EG10557" + ], + [ + "gene_synonym", + "GI:16129578" + ], + [ + "gene_synonym", + "GeneID:947104" + ], + [ + "gene_synonym", + "JW1612" + ], + [ + "gene_synonym", + "NP_416137.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18811" + ], + [ + "gene_synonym", + "b1620" + ], + [ + "gene_synonym", + "malI" + ] + ], + "dna_sequence": "ATGGCTACCGCCAAAAAAATAACCATTCATGATGTTGCGCTGGCTGCGGGCGTGTCGGTAAGTACCGTTTCGCTGGTGCTTAGTGGCAAAGGGCGAATCTCTACCGCCACAGGAGAACGCGTTAACGCCGCCATTGAAGAGCTGGGATTTGTGCGCAATCGCCAGGCGTCGGCGCTGCGCGGCGGGCAAAGCGGCGTCATTGGTTTGATCGTCCGTGATTTATCTGCGCCGTTTTACGCCGAATTGACGGCCGGATTGACGGAAGCTCTGGAAGCGCAGGGACGGATGGTTTTTTTGCTTCACGGCGGTAAAGACGGTGAGCAGCTGGCACAGCGGTTTTCACTGTTACTGAATCAGGGTGTCGATGGTGTGGTAATTGCCGGAGCTGCAGGAAGTAGCGATGACCTGCGACGGATGGCAGAAGAAAAAGCTATCCCGGTGATTTTCGCTTCCCGTGCCAGTTATCTTGATGATGTTGATACGGTTCGCCCGGACAACATGCAGGCTGCACAGTTGTTGACGGAGCATCTCATTCGCAATGGGCATCAGCGGATCGCCTGGCTGGGAGGGCAAAGTTCCTCATTAACCCGTGCAGAACGGGTTGGGGGCTATTGTGCAACTCTACTAAAATTTGGCCTGCCGTTTCATAGCGATTGGGTGTTGGAGTGCACTTCCAGCCAGAAGCAAGCCGCGGAAGCTATCACGGCGCTTTTACGTCATAACCCGACCATCAGTGCCGTGGTTTGCTATAACGAAACTATTGCGATGGGGGCATGGTTTGGTTTGCTCAAAGCAGGGCGGCAAAGCGGGGAAAGCGGAGTCGATCGTTACTTTGAGCAACAGGTTTCGCTGGCGGCATTTACCGATGCGACACCAACCACACTTGATGATATACCTGTTACCTGGGCCAGCACGCCAGCGCGGGAACTTGGTATCACACTTGCGGATCGCATGATGCAAAAAATCACCCATGAAGAGACGCATTCACGCAATCTTATTATTCCCGCCCGGCTCATTGCAGCGAAATAA", + "dna_sequence_length": 1029, + "functions": [ + "transcriptional repressor of Mal regulon" + ], + "id": "CDS_1609", + "location": [ + [ + "NC_000913", + 1699180, + "-", + 1029 + ] + ], + "md5": "d7263c9c865ca3505b3990a6154e7f6c", + "parent_gene": "", + "protein_md5": "be648286af472ff8f3c164034187c47e", + "protein_translation": "MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGITLADRMMQKITHEETHSRNLIIPARLIAAK", + "protein_translation_length": 342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005429" + ], + [ + "gene_synonym", + "ECK1616" + ], + [ + "gene_synonym", + "EcoGene:EG10563" + ], + [ + "gene_synonym", + "GI:16129579" + ], + [ + "gene_synonym", + "GeneID:946009" + ], + [ + "gene_synonym", + "JW1613" + ], + [ + "gene_synonym", + "NP_416138.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19642" + ], + [ + "gene_synonym", + "b1621" + ], + [ + "gene_synonym", + "malX" + ] + ], + "dna_sequence": "ATGACGGCGAAAACAGCACCGAAAGTCACGCTGTGGGAGTTCTTCCAGCAGTTAGGCAAAACCTTCATGTTACCCGTGGCATTATTGTCGTTCTGCGGCATTATGCTCGGCATTGGTAGTTCTCTTAGCAGCCATGATGTCATAACCCTGATCCCGGTCCTGGGCAACCCCGTGTTGCAGGCTATCTTTACCTGGATGAGTAAGATTGGCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGTAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGTATTATCGTCTGGATGCTGCATGAGCGTTTCCATAATATCCGCCTGCCGGATGCGCTGGCATTCTTCGGCGGTACGCGCTTCGTACCAATTATCTCCTCGCTGGTGATGGGCCTTGTCGGCCTGGTGATTCCATTAGTCTGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAAACCGTCAGCGGCGCACTGACCATCTTCCAGGCGCAATTGAGTTGCCCGACCACTCACGGTTTTTCTGAAAGCGCCACGCGTTTCCTTTCGCAAGGTAAAATGCCTGCGTTTCTCGGCGGTCTGCCAGGTGCAGCGTTAGCTATGTATCACTGCGCGCGCCCGGAAAATCGCCATAAAATTAAAGGTCTGCTGATTTCTGGCCTGATCGCCTGCGTCGTTGGCGGCACTACCGAACCGCTGGAATTCCTGTTCCTGTTCGTAGCGCCAGTTCTGTATGTCATCCACGCGCTGTTAACCGGCCTCGGCTTCACCGTCATGTCTGTGCTCGGCGTCACCATCGGTAATACCGACGGCAATATCATCGACTTCGTGGTGTTCGGTATTTTGCATGGTCTGTCAACCAAGTGGTACATGGTGCCAGTGGTGGCGGCAATCTGGTTTGTCGTTTACTACGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGTTGCCAGCTCAATCGAAAAAGCCGTTGCCGGTGCGCCGGGTAAATCAGGTTACAACGTTCCTGCAATCCTCGAAGCATTAGGCGGTGCCGACAATATTGTCAGCCTCGATAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGGCATAA", + "dna_sequence_length": 1593, + "functions": [ + "maltose and glucose-specific PTS enzyme IIB component and IIC component" + ], + "id": "CDS_1610", + "location": [ + [ + "NC_000913", + 1699355, + "+", + 1593 + ] + ], + "md5": "038591714b97700b72b94e54c2c611c9", + "parent_gene": "", + "protein_md5": "afd3eb819942c977bb330b327dde2fa5", + "protein_translation": "MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFIGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVQA", + "protein_translation_length": 530, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005432" + ], + [ + "gene_synonym", + "ECK1617" + ], + [ + "gene_synonym", + "EcoGene:EG10564" + ], + [ + "gene_synonym", + "GI:16129580" + ], + [ + "gene_synonym", + "GeneID:945937" + ], + [ + "gene_synonym", + "JW1614" + ], + [ + "gene_synonym", + "NP_416139.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23256" + ], + [ + "gene_synonym", + "b1622" + ], + [ + "gene_synonym", + "malY" + ] + ], + "dna_sequence": "ATGTTCGATTTTTCAAAGGTCGTGGATCGTCATGGCACATGGTGTACACAGTGGGATTATGTCGCTGACCGTTTCGGCACTGCTGACCTGTTACCGTTCACGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGTTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGAAGGCGTGGTGATCCACACACCCGCCTATGACGCATTTTACAAGGCCATTGAAGGTAACCAGCGCACAGTAATGCCCGTTGCTTTAGAGAAGCAGGCTGATGGTTGGTTTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATGAAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGACTGGGCGTTGCTAACGTCGGGCTCGAAAAGTTTCAATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGGCTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAACCTGACGTATATCGCAGATAAAATGAACGCCGCGTTTCCTGAACTCAACTGGCAGATCCCACAATCCACTTATCTGGCATGGCTTGATTTACGTCCGTTGAATATTGACGACAACGCGTTGCAAAAAGCACTTATCGAACAAGAAAAAGTCGCGATCATGCCGGGGTATACCTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAA", + "dna_sequence_length": 1173, + "functions": [ + "PLP-dependent beta-cystathionase and maltose regulon regulator" + ], + "id": "CDS_1611", + "location": [ + [ + "NC_000913", + 1700957, + "+", + 1173 + ] + ], + "md5": "c68c90a802111f0abf9f4349eeae1f1f", + "parent_gene": "", + "protein_md5": "db01e3168339eccf89562d127e8aba85", + "protein_translation": "MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR", + "protein_translation_length": 390, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005435" + ], + [ + "gene_synonym", + "ECK1618" + ], + [ + "gene_synonym", + "EcoGene:EG10030" + ], + [ + "gene_synonym", + "GI:16129581" + ], + [ + "gene_synonym", + "GeneID:945851" + ], + [ + "gene_synonym", + "JW1615" + ], + [ + "gene_synonym", + "NP_416140.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22333" + ], + [ + "gene_synonym", + "add" + ], + [ + "gene_synonym", + "b1623" + ] + ], + "dna_sequence": "ATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTCCCCAGACCATTCTTGAACTTGGCCGCCAGTATAATATCTCGCTTCCTGCACAATCCCTGGAAACACTGATTCCCCACGTTCAGGTCATTGCCAACGAACCCGATCTGGTGAGCTTTCTGACCAAACTTGACTGGGGCGTTAAAGTTCTCGCCTCTCTTGATGCCTGTCGCCGCGTGGCATTTGAAAACATTGAAGATGCAGCCCGTCACGGCCTGCACTATGTCGAGCTGCGTTTTTCACCAGGCTACATGGCAATGGCACATCAGCTGCCTGTAGCGGGTGTTGTCGAAGCGGTGATCGATGGCGTACGTGAAGGTTGCCGCACCTTTGGTGTGCAGGCGAAGCTTATCGGCATTATGAGCCGGACCTTCGGCGAAGCCGCCTGTCAGCAAGAGCTGGAGGCCTTTTTAGCCCACCGTGACCAGATTACCGCACTTGATTTAGCCGGTGATGAACTTGGTTTCCCGGGAAGTCTGTTCCTTTCTCACTTCAACCGCGCGCGTGATGCGGGCTGGCATATTACCGTCCATGCAGGCGAAGCTGCCGGGCCGGAAAGCATCTGGCAGGCGATTCGTGAACTGGGTGCGGAGCGTATTGGACATGGCGTAAAAGCCATTGAAGATCGGGCGCTGATGGATTTTCTCGCCGAGCAACAAATTGGTATTGAATCCTGTCTGACCTCCAATATTCAGACCAGCACCGTAGCAGAGCTGGCTGCACATCCGCTGAAAACGTTCCTTGAGCATGGCATTCGTGCCAGCATTAACACTGACGATCCCGGCGTACAGGGAGTGGATATCATTCACGAATATACCGTTGCCGCGCCAGCTGCTGGGTTATCCCGCGAGCAAATCCGCCAGGCACAGATTAATGGTCTGGAAATGGCTTTCCTCAGCGCTGAGGAAAAACGCGCACTGCGAGAAAAAGTCGCCGCGAAGTAA", + "dna_sequence_length": 1002, + "functions": [ + "adenosine deaminase" + ], + "id": "CDS_1612", + "location": [ + [ + "NC_000913", + 1702233, + "+", + 1002 + ] + ], + "md5": "550950397c2a66299650ebe2b41d8eeb", + "parent_gene": "", + "protein_md5": "d44a2fd7d35146cf110895eb20e4d3bd", + "protein_translation": "MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPGYMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK", + "protein_translation_length": 333, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005437" + ], + [ + "gene_synonym", + "ECK1619" + ], + [ + "gene_synonym", + "EcoGene:EG13931" + ], + [ + "gene_synonym", + "GI:90111307" + ], + [ + "gene_synonym", + "GeneID:947164" + ], + [ + "gene_synonym", + "JW5265" + ], + [ + "gene_synonym", + "NP_416141.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77376" + ], + [ + "gene_synonym", + "b1624" + ], + [ + "gene_synonym", + "ydgJ" + ] + ], + "dna_sequence": "ATGAGCGACAACATCCGTGTTGGGTTGATTGGGTATGGTTATGCGAGCAAAACCTTCCATGCGCCCCTGATTGCGGGCACGCCCGGGCAGGAACTGGCGGTAATCTCCAGCAGTGATGAAACAAAAGTAAAAGCCGACTGGCCAACGGTTACGGTTGTCTCTGAGCCGAAGCATCTGTTTAACGATCCCAACATAGACCTGATTGTCATTCCTACACCCAACGATACCCATTTCCCGTTAGCCAAAGCGGCGCTTGAGGCGGGTAAACATGTGGTCGTTGATAAACCCTTTACCGTGACACTGTCACAAGCGCGAGAGCTGGATGCGCTGGCAAAAAGCCTGGGGCGTGTGCTGTCTGTATTCCATAACCGTCGCTGGGATAGCGATTTCTTGACGCTAAAAGGTTTACTCGCGGAAGGCGTGCTGGGTGAAGTTGCTTACTTTGAGTCTCATTTTGACCGCTTCCGTCCGCAGGTGCGCGATCGTTGGCGTGAACAGGGCGGCCCAGGCAGCGGTATCTGGTACGATTTAGCACCACATCTTCTTGATCAGGCCATTACGCTTTTTGGTTTACCGGTCAGCATGACGGTAGATTTGGCACAGTTACGGCCCGGAGCGCAGTCGACCGATTATTTCCACGCCATCTTGTCCTATCCACAGCGGCGAGTCATTTTACACGGTACCATGCTGGCAGCCGCTGAGTCAGCACGGTATATCGTGCATGGATCCCGAGGCAGTTATGTGAAATATGGCCTCGATCCACAGGAAGAACGTCTGAAAAATGGCGAGCGTCTACCGCAGGAAGACTGGGGCTACGATATGCGTGATGGCGTACTTACCCGCGTGGAAGGTGAGGAACGTGTCGAAGAAACGCTGTTGACGGTGCCTGGGAATTATCCGGCTTACTATGCGGCTATTCGTGATGCGTTAAATGGCGATGGTGAAAATCCGGTTCCGGCAAGCCAGGCAATCCAGGTAATGGAGTTGATTGAGCTGGGCATCGAATCCGCCAAACATCGCGCGACTTTGTGCCTTGCATGA", + "dna_sequence_length": 1041, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1613", + "location": [ + [ + "NC_000913", + 1704308, + "-", + 1041 + ] + ], + "md5": "a33a90c76c6f3a50a2522f0923250699", + "parent_gene": "", + "protein_md5": "86f7e57fad2f793ba76eaf7e21e632c0", + "protein_translation": "MSDNIRVGLIGYGYASKTFHAPLIAGTPGQELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVRDRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047212" + ], + [ + "gene_synonym", + "ECK1620" + ], + [ + "gene_synonym", + "EcoGene:EG14389" + ], + [ + "gene_synonym", + "GI:49176127" + ], + [ + "gene_synonym", + "GeneID:2847682" + ], + [ + "gene_synonym", + "JW5963" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56976" + ], + [ + "gene_synonym", + "YP_025303.1" + ], + [ + "gene_synonym", + "b4409" + ], + [ + "gene_synonym", + "blr" + ] + ], + "dna_sequence": "ATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAA", + "dna_sequence_length": 126, + "functions": [ + "beta-lactam resistance membrane protein", + "divisome-associated protein" + ], + "id": "CDS_1614", + "location": [ + [ + "NC_000913", + 1704551, + "+", + 126 + ] + ], + "md5": "3fd2c836874068ca4b81f22b51fce6f7", + "parent_gene": "", + "protein_md5": "260145d3d032514e6a09ee528c2a5bfe", + "protein_translation": "MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK", + "protein_translation_length": 41, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005443" + ], + [ + "gene_synonym", + "ECK1621" + ], + [ + "gene_synonym", + "EcoGene:EG14303" + ], + [ + "gene_synonym", + "GI:16129583" + ], + [ + "gene_synonym", + "GeneID:946152" + ], + [ + "gene_synonym", + "JW1617" + ], + [ + "gene_synonym", + "NP_416142.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64467" + ], + [ + "gene_synonym", + "b1625" + ], + [ + "gene_synonym", + "cnu" + ], + [ + "gene_synonym", + "ydgT" + ] + ], + "dna_sequence": "ATGACTGTTCAGGACTACTTATTAAAATTTCGCAAAATCAGTTCACTCGAAAGTCTGGAAAAACTCTACGACCATCTTAATTACACCCTGACGGACGATCAGGAACTGATCAATATGTATCGTGCTGCCGATCACCGTCGCGCAGAGCTGGTTTCTGGCGGGCGTTTGTTTGACCTCGGCCAGGTACCGAAGTCCGTCTGGCACTATGTCCAATAA", + "dna_sequence_length": 216, + "functions": [ + "nucleoid-associated oriC-binding protein", + "H-NS and StpA stabilizing factor" + ], + "id": "CDS_1615", + "location": [ + [ + "NC_000913", + 1704949, + "+", + 216 + ] + ], + "md5": "20dbabe20dc8f12564f8d36446601dcf", + "parent_gene": "", + "protein_md5": "b2cdcea1d0c57fe6f0d34de0d283b551", + "protein_translation": "MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADHRRAELVSGGRLFDLGQVPKSVWHYVQ", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005447" + ], + [ + "gene_synonym", + "ECK1622" + ], + [ + "gene_synonym", + "EcoGene:EG13932" + ], + [ + "gene_synonym", + "GI:90111308" + ], + [ + "gene_synonym", + "GeneID:946154" + ], + [ + "gene_synonym", + "JW1618" + ], + [ + "gene_synonym", + "NP_416143.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76180" + ], + [ + "gene_synonym", + "b1626" + ], + [ + "gene_synonym", + "rsxP" + ], + [ + "gene_synonym", + "ydgK" + ] + ], + "dna_sequence": "ATGACCACCACAACGCCACAACGTATTGGAGGCTGGTTGCTTGGCCCGTTGGCCTGGCTTTTAGTCGCTCTGTTGAGTACGACGCTGGCGTTGTTGCTGTATACCGCTGCGTTATCTTCTCCGCAAACATTTCAAACGCTCGGCGGACAAGCACTGACGACACAAATCTTATGGGGCGTTTCTTTTATTACCGCTATCGCCTTGTGGTATTACACACTGTGGTTGACCATCGCTTTCTTTAAACGTCGGCGTTGTGTTCCTAAACACTATATTATCTGGCTGCTTATTTCCGTATTGCTGGCAGTAAAAGCATTCGCTTTTTCACCCGTGGAAGATGGCATAGCCGTTCGCCAGTTGCTGTTTACTTTGTTGGCAACCGCATTGATCGTCCCCTATTTCAAACGCTCGTCGCGGGTAAAAGCGACGTTTGTGAATCCGTAA", + "dna_sequence_length": 441, + "functions": [ + "DUF2569 family inner membrane protein" + ], + "id": "CDS_1616", + "location": [ + [ + "NC_000913", + 1705250, + "+", + 441 + ] + ], + "md5": "b8189c29a285342547781eb258c2998d", + "parent_gene": "", + "protein_md5": "79743816d85a4051a102a24dd65eee7a", + "protein_translation": "MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTFQTLGGQALTTQILWGVSFITAIALWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005450" + ], + [ + "gene_synonym", + "ECK1623" + ], + [ + "gene_synonym", + "EcoGene:EG13933" + ], + [ + "gene_synonym", + "GI:16129585" + ], + [ + "gene_synonym", + "GeneID:946148" + ], + [ + "gene_synonym", + "JW1619" + ], + [ + "gene_synonym", + "NP_416144.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A766" + ], + [ + "gene_synonym", + "b1627" + ], + [ + "gene_synonym", + "rnfA" + ], + [ + "gene_synonym", + "rsxA" + ], + [ + "gene_synonym", + "ydgL" + ] + ], + "dna_sequence": "ATGACTGACTACCTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTATGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGCGTCTATTTGCGCCTGGCTTATCGATACGTGGATTTTGATCCCACTTAATCTGATTTACCTGCGCACCCTGGCATTTATTCTGGTGATTGCTGTGGTCGTGCAGTTCACCGAGATGGTGGTGCGCAAAACCAGCCCGGTGCTTTACCGTCTGCTGGGGATTTTTTTGCCGCTTATCACCACCAACTGTGCAGTGCTCGGCGTGGCGTTGCTGAATATCAATCTCGGGCACAATTTCTTGCAGTCGGCGCTGTACGGTTTTTCCGCCGCTGTCGGTTTCTCGCTGGTGATGGTGCTCTTCGCCGCCATCCGCGAACGCCTTGCTGTGGCTGATGTCCCGGCACCTTTTCGCGGTAATGCCATTGCGTTAATTACCGCAGGTCTTATGTCTCTGGCCTTTATGGGCTTTAGTGGTTTGGTGAAGTTGTAA", + "dna_sequence_length": 582, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "inner membrane protein of electron transport complex" + ], + "id": "CDS_1617", + "location": [ + [ + "NC_000913", + 1705767, + "+", + 582 + ] + ], + "md5": "39e75b0b82a62ded5ecef31433e5bda9", + "parent_gene": "", + "protein_md5": "681c6b4ad29902edac090fcde2cc95c7", + "protein_translation": "MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005452" + ], + [ + "gene_synonym", + "ECK1624" + ], + [ + "gene_synonym", + "EcoGene:EG13934" + ], + [ + "gene_synonym", + "GI:16129586" + ], + [ + "gene_synonym", + "GeneID:946146" + ], + [ + "gene_synonym", + "JW1620" + ], + [ + "gene_synonym", + "NP_416145.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77223" + ], + [ + "gene_synonym", + "b1628" + ], + [ + "gene_synonym", + "rnfB" + ], + [ + "gene_synonym", + "rsxB" + ], + [ + "gene_synonym", + "ydgM" + ] + ], + "dna_sequence": "ATGAATGCTATCTGGATTGCCGTTGCCGCCGTGAGCCTGCTGGGCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGAAGCCATCAGCTGTAACGGTGAAAAAATCAACCGTTGCGCCCCAGGTGGCGAAGCTGTGATGCTAAAAATTGCCGAGTTGCTTAATGTCGAGCCGCAGCCGCTGGATGGCGAAGCGCAAGAGATAACGCCTGCGCGGATGGTGGCGGTTATTGATGAAAATAACTGTATTGGCTGCACTAAATGTATTCAGGCGTGTCCGGTAGACGCCATCGTTGGCGCTACCCGTGCCATGCATACGGTAATGAGTGATCTCTGTACGGGCTGCAATTTATGTGTTGATCCGTGCCCGACGCACTGCATCTCGTTGCAACCGGTCGCAGAAACACCTGACTCCTGGAAATGGGATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAA", + "dna_sequence_length": 579, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "putative iron-sulfur protein" + ], + "id": "CDS_1618", + "location": [ + [ + "NC_000913", + 1706348, + "+", + 579 + ] + ], + "md5": "5d231db3c8f8021f0d6ed5122ac99853", + "parent_gene": "", + "protein_md5": "e931b23c42c5e9f893309e237936e6c3", + "protein_translation": "MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005454" + ], + [ + "gene_synonym", + "ECK1625" + ], + [ + "gene_synonym", + "EcoGene:EG13935" + ], + [ + "gene_synonym", + "GI:16129587" + ], + [ + "gene_synonym", + "GeneID:946137" + ], + [ + "gene_synonym", + "JW1621" + ], + [ + "gene_synonym", + "NP_416146.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77611" + ], + [ + "gene_synonym", + "b1629" + ], + [ + "gene_synonym", + "rnfC" + ], + [ + "gene_synonym", + "rsxC" + ], + [ + "gene_synonym", + "ydgN" + ] + ], + "dna_sequence": "ATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCGGGTACCGTTACGGCTATTGCGCCCCACTCTACGGCTCATCCTTCAGCTTTAGCTGAATTAAGCGTGATTATTGATGCCGATGGTGAAGACTGCTGGATCCCGCGCGACGGCTGGGCCGATTATCGCACTCGCAGTCGCGAAGAGTTAATCGAGCGCATACATCAGTTTGGTGTTGCCGGGCTGGGCGGTGCAGGATTCCCGACAGGCGTTAAATTGCAGGGTGGCGGAGATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATGCTGCGCGCGGTGCTGGCGGACTCTAACGATATTTCTCTGCGGGTGATTCCAACCAAATATCCTTCTGGCGGTGCTAAACAATTAACCTACATTCTGACCGGGAAGCAGGTTCCACATGGCGGGCGTTCATCCGATATCGGCGTATTAATGCAAAACGTCGGCACTGCTTATGCAGTGAAACGTGCCGTTATTGATGGCGAGCCGATTACCGAGCGTGTTGTAACCCTGACTGGCGAAGCAATCGCTCGCCCGGGCAACGTCTGGGCACGGCTGGGGACGCCAGTGCGTCATTTATTGAATGATGCCGGATTCTGCCCCTCTGCCGATCAAATGGTGATTATGGGTGGCCCGCTAATGGGCTTTACCTTGCCATGGCTGGATGTCCCGGTCGTAAAGATTACCAACTGTCTGTTGGCTCCCTCTGCCAATGAACTTGGCGAACCACAGGAAGAACAAAGCTGCATCCGGTGTAGCGCCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGTTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTGGAGCGCGAAAAAGCGGCTCGCCTTGAACGACATAAGAGCGCAGCCGTTCAACCTGCAGCCAAAGATAAAGATGCGATTGCTGCCGCTCTGGCGCGGGTGAAAGAGAAACAGGCCCAGGCTACACAGCCTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAA", + "dna_sequence_length": 2223, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "putative membrane-associated NADH oxidoreductase of electron transport complex" + ], + "id": "CDS_1619", + "location": [ + [ + "NC_000913", + 1706919, + "+", + 2223 + ] + ], + "md5": "3428e48f1857b1f6cc3d099257f9d9c5", + "parent_gene": "", + "protein_md5": "2ed70f91572b19664bbed37ed5fc9895", + "protein_translation": "MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKREQQPANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED", + "protein_translation_length": 740, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005457" + ], + [ + "gene_synonym", + "ECK1626" + ], + [ + "gene_synonym", + "EcoGene:EG13936" + ], + [ + "gene_synonym", + "GI:16129588" + ], + [ + "gene_synonym", + "GeneID:946134" + ], + [ + "gene_synonym", + "JW1622" + ], + [ + "gene_synonym", + "NP_416147.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76182" + ], + [ + "gene_synonym", + "b1630" + ], + [ + "gene_synonym", + "rnfD" + ], + [ + "gene_synonym", + "rsxD" + ], + [ + "gene_synonym", + "ydgO" + ] + ], + "dna_sequence": "ATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGTTAGTGCTCTGTTAGCCGAAGCTCTCGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATTCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACAAAACCCGTTTAATCCGGCAATGATTGGTTATGTGGTCTTACTGATCTCCTTCCCCGTGCAGATGACCAGCTGGTTACCGCCACATGAAATTGCGGTCAACATCCCTGGTTTTATCGACGCCATCCAGGTTATTTTTAGCGGTCATACCGCCAGTGGTGGTGATATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTCCGTGCCGGTCATTCGGTTGAACAGATTATGCAATATCCGATCTACAGCGGTATTCTGGCGGGCGCTGGTTGGCAATGGGTAAATCTCGCCTGGCTGGCTGGCGGCGTATGGTTGCTATGGCAGAAAGCGATTCGCTGGCATATTCCCCTCAGCTTCTTAGTAACGCTGGCGTTATGCGCAATGTTGGGCTGGTTGTTCTCACCAGAAACACTGGCAGCACCGCAAATTCATCTGCTGTCTGGAGCGACCATGCTCGGCGCATTCTTTATTTTGACTGACCCGGTTACCGCTTCTACGACCAATCGTGGTCGTCTTATTTTCGGCGCGCTTGCGGGCTTATTAGTCTGGTTGATCCGCAGTTTCGGCGGCTATCCTGACGGCGTGGCTTTTGCCGTCCTGCTGGCGAACATCACGGTTCCTCTGATCGATTACTACACGCGTCCGCGCGTCTACGGCCATCGCAAAGGGTAA", + "dna_sequence_length": 1059, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "putative membrane protein of electron transport complex" + ], + "id": "CDS_1620", + "location": [ + [ + "NC_000913", + 1709142, + "+", + 1059 + ] + ], + "md5": "e04e529b3b23da0044038c6efe69065c", + "parent_gene": "", + "protein_md5": "0d36786da5a0387f0e1180b36b15a061", + "protein_translation": "MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAIRWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005459" + ], + [ + "gene_synonym", + "ECK1627" + ], + [ + "gene_synonym", + "EcoGene:EG13937" + ], + [ + "gene_synonym", + "GI:16129589" + ], + [ + "gene_synonym", + "GeneID:946158" + ], + [ + "gene_synonym", + "JW1623" + ], + [ + "gene_synonym", + "NP_416148.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77285" + ], + [ + "gene_synonym", + "b1631" + ], + [ + "gene_synonym", + "rnfG" + ], + [ + "gene_synonym", + "rsxG" + ], + [ + "gene_synonym", + "ydgP" + ] + ], + "dna_sequence": "ATGCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTTCTCAACTTCCTGCCTGTGGAGAATAA", + "dna_sequence_length": 621, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "putative membrane protein of electron transport complex" + ], + "id": "CDS_1621", + "location": [ + [ + "NC_000913", + 1710204, + "+", + 621 + ] + ], + "md5": "bab7b9d996c29b391c53493829baf613", + "parent_gene": "", + "protein_md5": "911404ef7490a1d21d8b123e97b38dab", + "protein_translation": "MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005461" + ], + [ + "gene_synonym", + "ECK1628" + ], + [ + "gene_synonym", + "EcoGene:EG13938" + ], + [ + "gene_synonym", + "GI:16129590" + ], + [ + "gene_synonym", + "GeneID:947509" + ], + [ + "gene_synonym", + "JW1624" + ], + [ + "gene_synonym", + "NP_416149.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77179" + ], + [ + "gene_synonym", + "b1632" + ], + [ + "gene_synonym", + "rnfE" + ], + [ + "gene_synonym", + "rsxE" + ], + [ + "gene_synonym", + "ydgQ" + ] + ], + "dna_sequence": "GTGAGCGAAATTAAAGACGTTATTGTTCAGGGGTTGTGGAAAAACAACTCTGCGCTGGTCCAGTTGCTCGGCCTTTGTCCTCTGTTGGCGGTCACGTCCACTGCCACTAACGCTCTGGGTTTAGGACTTGCGACTACGCTGGTACTGACGCTGACCAACCTGACCATTTCGACGCTGCGTCACTGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACGCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCGCCGCCAAAAAAGGTCCGGCGCTTTCGGCACTGGACGGCTTTTCAATTGGTATGGGCGCAACCTGCGCCATGTTCGTGCTGGGTTCACTACGCGAAATTATCGGCAATGGCACATTGTTTGACGGTGCAGATGCGCTGTTAGGTAGCTGGGCAAAAGTATTACGCGTGGAGATTTTCCACACCGACTCCCCTTTCCTGCTGGCGATGCTGCCACCAGGTGCATTTATTGGCCTGGGACTGATGCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCAGAACGTGCATTGCCAAACGGTGAAACAGGGAATGTCTGA", + "dna_sequence_length": 696, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component", + "electron transport inner membrane NADH-quinone reductase" + ], + "id": "CDS_1622", + "location": [ + [ + "NC_000913", + 1710828, + "+", + 696 + ] + ], + "md5": "fac5e20cc4d0f51d7ebf699cb316f16c", + "parent_gene": "", + "protein_md5": "6cddeefa00b22dee1d7524809c6ff43a", + "protein_translation": "MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005463" + ], + [ + "gene_synonym", + "ECK1629" + ], + [ + "gene_synonym", + "EcoGene:EG10662" + ], + [ + "gene_synonym", + "GI:16129591" + ], + [ + "gene_synonym", + "GeneID:947122" + ], + [ + "gene_synonym", + "JW1625" + ], + [ + "gene_synonym", + "NP_416150.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB83" + ], + [ + "gene_synonym", + "b1633" + ], + [ + "gene_synonym", + "nth" + ] + ], + "dna_sequence": "ATGAATAAAGCAAAACGCCTGGAGATCCTCACTCGCCTGCGTGAGAACAATCCTCATCCCACCACCGAGCTTAATTTCAGTTCGCCTTTTGAATTGCTGATTGCCGTACTGCTTTCCGCTCAGGCGACCGATGTCAGTGTTAATAAGGCGACGGCGAAACTCTACCCGGTGGCGAATACGCCTGCAGCGATGCTTGAACTGGGCGTTGAAGGGGTGAAAACCTATATCAAAACGATTGGGCTTTATAACAGCAAAGCAGAAAATATCATCAAAACCTGCCGTATCTTGCTGGAGCAGCATAATGGCGAGGTTCCGGAAGATCGTGCTGCGCTTGAAGCCCTGCCCGGCGTAGGTCGTAAAACAGCCAACGTCGTATTAAACACTGCATTCGGCTGGCCGACTATTGCTGTCGACACGCACATTTTCCGCGTTTGTAATCGTACTCAATTTGCGCCGGGGAAAAACGTCGAACAGGTAGAAGAAAAGCTACTGAAAGTGGTTCCAGCAGAGTTTAAAGTCGACTGCCACCATTGGTTGATCCTGCACGGGCGTTATACCTGCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGA", + "dna_sequence_length": 636, + "functions": [ + "DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)" + ], + "id": "CDS_1623", + "location": [ + [ + "NC_000913", + 1711523, + "+", + 636 + ] + ], + "md5": "6f181e935a27422647ce8909df9b11a5", + "parent_gene": "", + "protein_md5": "2e3946f18d148e9aa5d7104f4a7b2eeb", + "protein_translation": "MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005469" + ], + [ + "gene_synonym", + "ECK1630" + ], + [ + "gene_synonym", + "EcoGene:EG13939" + ], + [ + "gene_synonym", + "GI:16129592" + ], + [ + "gene_synonym", + "GeneID:947436" + ], + [ + "gene_synonym", + "JW1626" + ], + [ + "gene_synonym", + "NP_416151.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77304" + ], + [ + "gene_synonym", + "b1634" + ], + [ + "gene_synonym", + "dtpA" + ], + [ + "gene_synonym", + "tppB" + ], + [ + "gene_synonym", + "ydgR" + ] + ], + "dna_sequence": "GTGTCCACTGCAAACCAAAAACCAACTGAAAGCGTCAGTTTGAACGCTTTCAAACAACCGAAGGCGTTCTATCTCATCTTCTCGATTGAGTTATGGGAACGTTTTGGTTATTACGGCCTACAAGGAATTATGGCTGTTTACCTGGTTAAACAACTGGGTATGTCTGAAGCGGATTCAATCACCCTTTTCTCTTCCTTTAGTGCCCTGGTTTATGGTCTGGTCGCTATCGGCGGCTGGTTAGGTGACAAGGTACTGGGTACTAAACGCGTAATTATGCTCGGCGCTATTGTGCTGGCGATTGGTTATGCTCTGGTTGCCTGGTCTGGTCACGACGCCGGTATCGTTTATATGGGTATGGCGGCTATTGCGGTCGGTAACGGCCTGTTTAAAGCTAACCCGTCTTCTCTGCTTTCTACATGCTATGAGAAAAACGACCCGCGTCTGGACGGTGCATTCACCATGTACTACATGTCCGTCAACATCGGCTCTTTCTTCTCTATGATTGCTACGCCGTGGCTGGCCGCGAAATACGGCTGGAGTGTTGCGTTTGCGTTGAGCGTTGTAGGCCTGCTGATCACTATCGTTAACTTCGCCTTCTGCCAACGCTGGGTTAAACAGTACGGTTCAAAACCAGACTTCGAGCCTATCAACTACCGTAACCTGCTGCTGACCATTATTGGTGTTGTGGCACTGATCGCTATCGCCACCTGGCTGCTGCACAATCAGGAAGTTGCGCGTATGGCGCTGGGCGTTGTTGCCTTCGGTATCGTGGTTATCTTCGGTAAAGAAGCCTTCGCGATGAAAGGTGCTGCGCGTCGTAAAATGATCGTTGCCTTCATCCTGATGCTCGAAGCCATTATCTTCTTCGTGCTGTACAGCCAGATGCCAACGTCACTGAACTTCTTTGCGATTCGTAACGTTGAGCACTCCATTCTGGGTCTGGCCGTAGAACCTGAGCAGTATCAGGCACTGAACCCGTTCTGGATCATCATCGGTAGTCCGATTCTGGCCGCTATCTATAACAAGATGGGCGATACCCTGCCGATGCCAACCAAGTTTGCAATCGGCATGGTGATGTGTTCTGGTGCGTTCCTGATTCTGCCGCTGGGTGCGAAATTCGCGTCTGACGCTGGTATCGTGTCTGTAAGCTGGCTGGTCGCAAGCTATGGCCTGCAGAGCATCGGGGAACTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGTATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAA", + "dna_sequence_length": 1503, + "functions": [ + "dipeptide and tripeptide permease A" + ], + "id": "CDS_1624", + "location": [ + [ + "NC_000913", + 1712769, + "+", + 1503 + ] + ], + "md5": "95e9f80d8c7106643df8ec8feed32271", + "parent_gene": "", + "protein_md5": "3dae444084fbf816a6271cca7c7bea18", + "protein_translation": "MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQDDAADKAAKAAVA", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005473" + ], + [ + "gene_synonym", + "ECK1631" + ], + [ + "gene_synonym", + "EcoGene:EG12613" + ], + [ + "gene_synonym", + "GI:16129593" + ], + [ + "gene_synonym", + "GeneID:945758" + ], + [ + "gene_synonym", + "JW1627" + ], + [ + "gene_synonym", + "NP_416152.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9D2" + ], + [ + "gene_synonym", + "b1635" + ], + [ + "gene_synonym", + "gst" + ], + [ + "gene_synonym", + "gstA" + ] + ], + "dna_sequence": "ATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCGCTTCCCATATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATTTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACAAACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGTTCTGCGCTGGGCATACGCGGTGAAACTGAATCTGGAAGGGTTAGAGCACATTGCAGCATTTATGCAACGTATGGCTGAACGTCCGGAAGTACAAGACGCGCTGTCAGCGGAAGGCTTAAAGTAA", + "dna_sequence_length": 606, + "functions": [ + "glutathionine S-transferase" + ], + "id": "CDS_1625", + "location": [ + [ + "NC_000913", + 1714377, + "+", + 606 + ] + ], + "md5": "c8a8591f15b6805d2b9b785bc7dad0c0", + "parent_gene": "", + "protein_md5": "d76a3d3965661b7f68059d8501c00579", + "protein_translation": "MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005475" + ], + [ + "gene_synonym", + "ECK1632" + ], + [ + "gene_synonym", + "EcoGene:EG13940" + ], + [ + "gene_synonym", + "GI:16129594" + ], + [ + "gene_synonym", + "GeneID:946162" + ], + [ + "gene_synonym", + "JW1628" + ], + [ + "gene_synonym", + "NP_416153.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77150" + ], + [ + "gene_synonym", + "b1636" + ], + [ + "gene_synonym", + "pdxY" + ], + [ + "gene_synonym", + "ydgS" + ] + ], + "dna_sequence": "ATGATGAAAAATATTCTCGCTATCCAGTCTCACGTTGTTTATGGTCATGCGGGTAACAGTGCGGCAGAGTTTCCGATGCGCCGCCTGGGCGCGAACGTCTGGCCGCTGAACACCGTTCAATTTTCTAATCACACCCAATACGGCAAATGGACTGGCTGCGTGATGCCGCCCAGCCATTTAACCGAAATTGTGCAAGGCATTGCCGCCATTGATAAATTACACACCTGTGATGCCGTATTAAGTGGCTATCTGGGATCGGCGGAGCAGGGTGAACATATCCTCGGTATCGTCCGTCAGGTGAAAGCCGCGAATCCGCAGGCGAAATATTTTTGCGATCCGGTAATGGGTCATCCGGAAAAAGGCTGTATCGTTGCACCGGGTGTCGCAGAGTTTCATGTGCGGCACGGTTTGCCTGCCAGCGATATCATTGCGCCAAATCTGGTTGAGCTGGAAATACTCTGTGAGCATGCGGTAAATAACGTCGAAGAAGCGGTTCTGGCAGCGCGCGAACTCATTGCGCAAGGGCCACAAATTGTGTTGGTTAAACACCTGGCGCGAGCTGGCTACAGCCGTGACCGTTTTGAAATGCTGCTGGTCACCGCCGATGAAGCCTGGCATATCAGCCGTCCGCTGGTGGATTTTGGTATGCGCCAGCCGGTAGGTGTTGGTGATGTGACGAGCGGTTTACTGCTGGTGAAACTGCTTCAGGGGGCAACGCTGCAGGAGGCGCTGGAACATGTGACCGCTGCAGTCTACGAAATCATGGTGACCACCAAAGCAATGCAGGAATATGAGCTGCAAGTGGTGGCTGCTCAGGATCGTATTGCCAAACCAGAACATTACTTCAGCGCAACAAAGCTCTGA", + "dna_sequence_length": 864, + "functions": [ + "pyridoxamine kinase" + ], + "id": "CDS_1626", + "location": [ + [ + "NC_000913", + 1715889, + "-", + 864 + ] + ], + "md5": "b89a40ddc4d31f63462fc75a47da6ad7", + "parent_gene": "", + "protein_md5": "1c961799c8e66571363c81642cf2ab91", + "protein_translation": "MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAKPEHYFSATKL", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005477" + ], + [ + "gene_synonym", + "ECK1633" + ], + [ + "gene_synonym", + "EcoGene:EG11043" + ], + [ + "gene_synonym", + "GI:16129595" + ], + [ + "gene_synonym", + "GeneID:948855" + ], + [ + "gene_synonym", + "JW1629" + ], + [ + "gene_synonym", + "NP_416154.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGJ9" + ], + [ + "gene_synonym", + "b1637" + ], + [ + "gene_synonym", + "tyrS" + ] + ], + "dna_sequence": "ATGGCAAGCAGTAACTTGATTAAACAATTGCAAGAGCGGGGGCTGGTAGCCCAGGTGACGGACGAGGAAGCGTTAGCAGAGCGACTGGCGCAAGGCCCGATCGCGCTCTATTGCGGCTTCGATCCTACCGCTGACAGCTTGCATTTGGGGCATCTTGTTCCATTGTTATGCCTGAAACGCTTCCAGCAGGCGGGCCACAAGCCGGTTGCGCTGGTAGGCGGCGCGACGGGTCTGATTGGCGACCCGAGCTTCAAAGCTGCCGAGCGTAAGCTGAACACCGAAGAAACTGTTCAGGAGTGGGTGGACAAAATCCGTAAGCAGGTTGCCCCGTTCCTCGATTTCGACTGTGGAGAAAACTCTGCTATCGCGGCGAACAACTATGACTGGTTCGGCAATATGAATGTGCTGACCTTCCTGCGCGATATTGGCAAACACTTCTCCGTTAACCAGATGATCAACAAAGAAGCGGTTAAGCAGCGTCTCAACCGTGAAGATCAGGGGATTTCGTTCACTGAGTTTTCCTACAACCTGTTGCAGGGTTATGACTTCGCCTGTCTGAACAAACAGTACGGTGTGGTGCTGCAAATTGGTGGTTCTGACCAGTGGGGTAACATCACTTCTGGTATCGACCTGACCCGTCGTCTGCATCAGAATCAGGTGTTTGGCCTGACCGTTCCGCTGATCACTAAAGCAGATGGCACCAAATTTGGTAAAACTGAAGGCGGCGCAGTCTGGTTGGATCCGAAGAAAACCAGCCCGTACAAATTCTACCAGTTCTGGATCAACACTGCGGATGCCGACGTTTACCGCTTCCTGAAGTTCTTCACCTTTATGAGCATTGAAGAGATCAACGCCCTGGAAGAAGAAGATAAAAACAGCGGTAAAGCACCGCGCGCCCAGTATGTACTGGCGGAGCAGGTGACTCGTCTGGTTCACGGTGAAGAAGGTTTACAGGCGGCAAAACGTATTACCGAATGCCTGTTCAGCGGTTCTTTGAGTGCGCTGAGTGAAGCGGACTTCGAACAGCTGGCGCAGGACGGCGTACCGATGGTTGAGATGGAAAAGGGCGCAGACCTGATGCAGGCACTGGTCGATTCTGAACTGCAACCTTCCCGTGGTCAGGCACGTAAAACTATCGCCTCCAATGCCATCACCATTAACGGTGAAAAACAGTCCGATCCTGAATACTTCTTTAAAGAAGAAGATCGTCTGTTTGGTCGTTTTACCTTACTGCGTCGCGGTAAAAAGAATTACTGTCTGATTTGCTGGAAATAA", + "dna_sequence_length": 1275, + "functions": [ + "tyrosyl-tRNA synthetase" + ], + "id": "CDS_1627", + "location": [ + [ + "NC_000913", + 1717222, + "-", + 1275 + ] + ], + "md5": "ff58195da57988e2caea7935073e2f4f", + "parent_gene": "", + "protein_md5": "681af77515750a11db37bcd4ed5ebe76", + "protein_translation": "MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK", + "protein_translation_length": 424, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005482" + ], + [ + "gene_synonym", + "ECK1634" + ], + [ + "gene_synonym", + "EcoGene:EG11487" + ], + [ + "gene_synonym", + "GI:16129596" + ], + [ + "gene_synonym", + "GeneID:946806" + ], + [ + "gene_synonym", + "JW1630" + ], + [ + "gene_synonym", + "NP_416155.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI7" + ], + [ + "gene_synonym", + "b1638" + ], + [ + "gene_synonym", + "pdxH" + ] + ], + "dna_sequence": "ATGTCTGATAACGACGAATTGCAGCAAATCGCGCATCTGCGCCGTGAATACACCAAAGGCGGGTTACGCCGCCGCGATCTTCCCGCCGATCCATTAACCCTTTTTGAACGTTGGCTCTCTCAGGCTTGTGAAGCCAAACTGGCGGACCCTACCGCGATGGTGGTCGCTACCGTGGATGAACATGGTCAGCCTTATCAGCGCATCGTTTTACTCAAACATTACGACGAAAAAGGCATGGTGTTTTACACCAACCTCGGCAGCCGTAAAGCACATCAAATCGAAAATAATCCGCGCGTTAGCCTGCTGTTCCCGTGGCATACCCTTGAGCGCCAGGTGATGGTGATCGGTAAAGCAGAACGACTTTCGACTCTCGAAGTGATGAAATATTTTCATAGCCGCCCGCGTGATAGCCAGATTGGTGCATGGGTTTCGAAGCAGTCCAGTCGCATTTCTGCCCGCGGTATCCTTGAAAGTAAATTCCTGGAGCTGAAGCAGAAGTTTCAACAGGGCGAAGTGCCATTGCCGAGCTTTTGGGGCGGTTTTCGCGTCAGCCTTGAACAGATTGAGTTCTGGCAGGGTGGTGAGCATCGCCTGCATGACCGCTTTTTGTACCAGCGTGAAAATGATGCGTGGAAGATTGATCGTCTTGCACCCTGA", + "dna_sequence_length": 657, + "functions": [ + "pyridoxine 5'-phosphate oxidase" + ], + "id": "CDS_1628", + "location": [ + [ + "NC_000913", + 1718007, + "-", + 657 + ] + ], + "md5": "953d7cd8ba4ce9f1605fc0fddc329a34", + "parent_gene": "", + "protein_md5": "703f9b9778717f8100d9df88d0cc741a", + "protein_translation": "MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005485" + ], + [ + "gene_synonym", + "ECK1635" + ], + [ + "gene_synonym", + "EcoGene:EG11488" + ], + [ + "gene_synonym", + "GI:90111309" + ], + [ + "gene_synonym", + "GeneID:946811" + ], + [ + "gene_synonym", + "JW1631" + ], + [ + "gene_synonym", + "NP_416156.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28224" + ], + [ + "gene_synonym", + "b1639" + ], + [ + "gene_synonym", + "mliC" + ], + [ + "gene_synonym", + "ydhA" + ] + ], + "dna_sequence": "ATGACTATGAAAAAACTGTTAATTATCATTTTGCCGGTCCTTCTCTCCGGCTGTAGCGCCTTTAATCAGCTGGTTGAGCGCATGCAAACCGATACGCTGGAATACCAGTGTGATGAAAAACCGTTGACGGTCAAACTGAATAATCCGCGCCAGGAGGTCAGTTTTGTTTACGATAATCAACTACTGCATCTCAAACAGGGCATTTCAGCCTCTGGCGCGCGTTACACTGACGGAATCTATGTTTTCTGGTCGAAAGGCGATGAAGCGACTGTCTATAAACGCGACCGCATCGTCTTGAATAACTGTCAGTTACAAAATCCACAGCGTTGA", + "dna_sequence_length": 330, + "functions": [ + "inhibitor of c-type lysozyme, membrane-bound", + "putative lipoprotein" + ], + "id": "CDS_1629", + "location": [ + [ + "NC_000913", + 1718395, + "-", + 330 + ] + ], + "md5": "95b742fc19b654eb7019cefd897d05f8", + "parent_gene": "", + "protein_md5": "8e9f6946e556506a4b25b02adb2d3e90", + "protein_translation": "MTMKKLLIIILPVLLSGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNPQR", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005488" + ], + [ + "gene_synonym", + "ECK1636" + ], + [ + "gene_synonym", + "EcoGene:EG13942" + ], + [ + "gene_synonym", + "GI:16129598" + ], + [ + "gene_synonym", + "GeneID:946810" + ], + [ + "gene_synonym", + "JW1632" + ], + [ + "gene_synonym", + "NP_416157.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77570" + ], + [ + "gene_synonym", + "anmK" + ], + [ + "gene_synonym", + "b1640" + ], + [ + "gene_synonym", + "ydhH" + ] + ], + "dna_sequence": "ATGAAATCGGGCCGCTTTATTGGCGTTATGTCAGGCACCAGCCTTGATGGTGTTGATGTTGTGTTGGCGACAATTGATGAACACCGGGTCGCACAGCTGGCAAGTTTGAGTTGGCCGATCCCGGTATCTCTGAAACAGGCTGTACTGGATATTTGCCAGGGCCAGCAGCTTACACTTTCGCAGTTTGGACAGCTTGATACTCAACTCGGGCAACTTTTTGCTGATGCGGTCAATGCCTTGCTTAAGGAACAAAATCTGCAGGCAAGAGATATAGTTGCGATCGGTTGTCACGGTCAAACCGTCTGGCATGAACCGACGGGCGTGGCACCACACACTTTACAGATTGGCGATAACAATCAAATTGTGGCACGCACCGGAATTACGGTTGTCGGTGATTTTCGCCGTCGCGATATTGCCTTGGGAGGACAAGGCGCACCGCTGGTACCTGCGTTCCATCATGCGCTGCTGGCTCACCCAACCGAGCGACGAATGGTGCTCAATATTGGCGGCATCGCCAATCTGTCACTGCTCATTCCTGGGCAGCCGGTTGGGGGCTACGATACCGGTCCTGGTAACATGCTGATGGATGCCTGGATCTGGCGTCAGGCCGGTAAACCTTACGATAAAGATGCCGAGTGGGCACGGGCGGGTAAAGTTATTCTCCCACTGCTGCAAAATATGCTCAGCGACCCGTATTTCTCGCAACCTGCACCGAAAAGCACCGGACGCGAATACTTTAACTATGGTTGGCTGGAGCGCCATTTGCGCCATTTTCCGGGTGTTGATCCCCGAGATGTGCAGGCGACACTGGCAGAACTCACCGCCGTGACCATTTCTGAACAAGTTTTGTTGAGCGGTGGCTGCGAACGATTGATGGTATGTGGTGGAGGTAGTCGTAATCCGCTACTCATGGCGCGTCTGGCGGCATTACTGCCAGGCACAGAAGTCACCACCACCGATGCCGTTGGCATTAGTGGCGATGACATGGAAGCATTGGCTTTCGCCTGGCTTGCCTGGCGGACGCTGGCGGGATTACCAGGAAATCTGCCTTCCGTCACTGGCGCAAGCCAGGAGACGGTACTGGGGGCTATTTTCCCCGCTAACCCGTGA", + "dna_sequence_length": 1110, + "functions": [ + "anhydro-N-acetylmuramic acid kinase" + ], + "id": "CDS_1630", + "location": [ + [ + "NC_000913", + 1719602, + "-", + 1110 + ] + ], + "md5": "c148aa61ba2c3db8456d14ef04a31d22", + "parent_gene": "", + "protein_md5": "a2c7c4738964e40146c8c753c686416c", + "protein_translation": "MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSLKQAVLDICQGQQLTLSQFGQLDTQLGQLFADAVNALLKEQNLQARDIVAIGCHGQTVWHEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPTERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAVTISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005493" + ], + [ + "gene_synonym", + "ECK1637" + ], + [ + "gene_synonym", + "EcoGene:EG13409" + ], + [ + "gene_synonym", + "GI:49176129" + ], + [ + "gene_synonym", + "GeneID:946801" + ], + [ + "gene_synonym", + "JW1633" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A905" + ], + [ + "gene_synonym", + "YP_025304.1" + ], + [ + "gene_synonym", + "b1641" + ], + [ + "gene_synonym", + "slyB" + ] + ], + "dna_sequence": "ATGATTAAACGCGTATTGGTTGTTTCAATGGTAGGTCTGTCTCTTGTCGGTTGTGTTAATAACGACACCCTGTCAGGGGATGTTTATACCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATTCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACTGCAGCAGGCGCTGTTGCAGGTGGCGTAGCTGGTCAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAA", + "dna_sequence_length": 468, + "functions": [ + "outer membrane lipoprotein" + ], + "id": "CDS_1631", + "location": [ + [ + "NC_000913", + 1719876, + "+", + 468 + ] + ], + "md5": "6f874ab798195eeb78cfba544a81fa2d", + "parent_gene": "", + "protein_md5": "b2a03d2e7fe3b375a54295440bd78a9a", + "protein_translation": "MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005495" + ], + [ + "gene_synonym", + "ECK1638" + ], + [ + "gene_synonym", + "EcoGene:EG13408" + ], + [ + "gene_synonym", + "GI:90111310" + ], + [ + "gene_synonym", + "GeneID:946167" + ], + [ + "gene_synonym", + "JW5267" + ], + [ + "gene_synonym", + "NP_416159.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8W2" + ], + [ + "gene_synonym", + "b1642" + ], + [ + "gene_synonym", + "slyA" + ] + ], + "dna_sequence": "TTGGAATCGCCACTAGGTTCTGATCTGGCACGGTTGGTGCGCATATGGCGTGCTCTGATAGACCATCGCCTGAAACCGCTGGAGTTAACACAAACCCATTGGGTTACGTTACACAATATCCATCAGTTACCTCCAGACCAGTCGCAAATTCAACTGGCAAAAGCGATTGGCATCGAGCAGCCATCACTGGTCCGTACTCTGGACCAACTGGAAGAAAAAGGGTTAATTTCGCGTCAAACTTGTGCCAGCGATCGTCGGGCTAAACGTATTAAACTGACGGAAAAGGCAGAGCCGCTGATCAGCGAAATGGAAGCTGTTATTAACAAAACCCGCGCGGAAATATTACATGGCATCTCCGCAGAGGAACTGGAGCAACTGATTACGCTCATCGCAAAACTTGAGCATAATATCATTGAGTTACAGGCCAAAGGGTGA", + "dna_sequence_length": 435, + "functions": [ + "global transcriptional regulator" + ], + "id": "CDS_1632", + "location": [ + [ + "NC_000913", + 1720824, + "-", + 435 + ] + ], + "md5": "95b9c9f57bb817c5e27f421c12053cba", + "parent_gene": "", + "protein_md5": "64a1a1fc28a6d2232237a509090132ae", + "protein_translation": "MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005499" + ], + [ + "gene_synonym", + "ECK1639" + ], + [ + "gene_synonym", + "EcoGene:EG13943" + ], + [ + "gene_synonym", + "GI:16129601" + ], + [ + "gene_synonym", + "GeneID:947559" + ], + [ + "gene_synonym", + "JW1635" + ], + [ + "gene_synonym", + "NP_416160.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64471" + ], + [ + "gene_synonym", + "b1643" + ], + [ + "gene_synonym", + "ydhI" + ] + ], + "dna_sequence": "GTGAAGTTTATGCTCAATGCAACAGGATTGCCCTTACAAGATCTGGTGTTCGGTGCGTCCGTCTACTTTCCTCCGTTTTTCAAAGCATTCGCGTTTGGATTCGTCATCTGGCTTGTCGTACACCGCCTGCTTCGTGGCTGGATCTACGCCGGTGACATCTGGCATCCCTTGTTAATGGATTTATCGCTGTTTGCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAA", + "dna_sequence_length": 237, + "functions": [ + "DUF1656 family putative inner membrane efflux pump associated protein" + ], + "id": "CDS_1633", + "location": [ + [ + "NC_000913", + 1721025, + "+", + 237 + ] + ], + "md5": "b6f4b996618ad5d0ddad0263e1e684be", + "parent_gene": "", + "protein_md5": "d10291ec91a7668a07ebae273da5f232", + "protein_translation": "MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005501" + ], + [ + "gene_synonym", + "ECK1640" + ], + [ + "gene_synonym", + "EcoGene:EG13944" + ], + [ + "gene_synonym", + "GI:90111311" + ], + [ + "gene_synonym", + "GeneID:946499" + ], + [ + "gene_synonym", + "JW1636" + ], + [ + "gene_synonym", + "NP_416161.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76185" + ], + [ + "gene_synonym", + "b1644" + ], + [ + "gene_synonym", + "ydhJ" + ] + ], + "dna_sequence": "ATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACAGGTTTCTATCACCCCACAGGTGTCGGGACGTATTGTTGAGCTGAATATAAAAGACAACCAGCTGGTTAACGCGGGGGATCTTCTGCTCACGATCGATAAAACGCCCTTTCAGATCGCCGAGCTGAACGCACAGGCTCAGCTGGCGAAAGCGCAATCTGACCTCGCAAAAGCCAATAACGAAGCGAATCGTCGTCGTCATCTCTCACAAAATTTTATTTCTGCCGAAGAACTCGATACCGCTAACCTCAATGTTAAAGCGATGCAGGCCAGTGTTGATGCCGCACAGGCGACGCTGAAACAGGCACAATGGCAACTGGCGCAAACGGAAATTCGCGCCCCGGTGAGTGGATGGGTGACTAACCTTACTACCCGCATCGGCGATTACGCTGATACCGGGAAACCGCTGTTTGCCCTTGTCGACAGCCACTCGTTTTACGTCATTGGTTATTTTGAAGAAACCAAGTTGCGCCATATCCGCGAAGGTGCACCAGCACAAATTACCCTCTATAGTGATAACAAAACGTTACAGGGTCACGTTTCCAGTATCGGTCGGGCGATTTATGATCAGAGCGTTGAAAGTGACTCAAGCCTTATTCCGGATGTTAAACCTAACGTCCCCTGGGTTCGACTCGCCCAACGCGTTCCCGTCCGCTTTGCGCTGGATAAAGTCCCAGGCGATGTCACGTTGGTGTCGGGCACCACCTGTAGCATTGCCGTAGGTCAATAA", + "dna_sequence_length": 858, + "functions": [ + "putative membrane fusion protein (MFP) of YdhJK efflux pump" + ], + "id": "CDS_1634", + "location": [ + [ + "NC_000913", + 1721264, + "+", + 858 + ] + ], + "md5": "af29d9e26372ebfc3f8cf819d54288bf", + "parent_gene": "", + "protein_md5": "fd8919f6b2d6a3ae776d12d149eb4130", + "protein_translation": "MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005503" + ], + [ + "gene_synonym", + "ECK1641" + ], + [ + "gene_synonym", + "EcoGene:EG13945" + ], + [ + "gene_synonym", + "GI:16129603" + ], + [ + "gene_synonym", + "GeneID:946528" + ], + [ + "gene_synonym", + "JW1637" + ], + [ + "gene_synonym", + "NP_416162.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76186" + ], + [ + "gene_synonym", + "b1645" + ], + [ + "gene_synonym", + "ydhK" + ] + ], + "dna_sequence": "ATGAACGCATCGTCATGGTCCTTGCGCAATTTGCCCTGGTTCAGGGCCACGCTGGCGCAATGGCGTTATGCGTTACGCAATACCATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCTTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGCCGGGCATACGCTCAATGAGCCGTGGTTTTTTCTATTGAGCATGTCGGCGTGGCTTGGCTTTTGTACCTGGGCCTGTGCGCACTTCACGAATAACGTCGCGTATGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAGATGATCATACCAGACTCCCACGGACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGGCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGTACTCTACTCCGCCGTCGCAGCACCGTTTAAGTCGTTGTCACTTCTGATGCGCACGCTGGTGTTACTTTCGCTATTCAGCTTTGTGGTCAAATTTGGTCTGATGGTCCAGATTAGCGATCTGTGGCAATTTTTACTGTTTCTCTTTCCACTGCTGGCGACAATGCAGCTTCTTAAATTGCAGATGCCAAAATTTGCCGCATTGTGGGGGCAACTGATTGTTTTTATGGGTTCTTTTATCGCTGTCACTAATCCCCCGGTGTATGATTTTGCTGATTTTCTTAACGATAATCTGGCAAAAATCGTTGGCGTCGCGTTGGCGTGGTTAGCGTTCGCCATTCTGCGTCCAGGATCGGATGCTCGTAAAAGCCGCCGCCATATTCGCGCGCTGCGCCGGGATTTTGTCGATCAGCTAAGCCGCCATCCAACACTGAGTGAAAGCGAATTTGAATCGCTCACTTATCATCACGTCAGTCAGTTGAGTAACAGCCAGGATGCGCTGGCTCGCCGTTGGTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCTCGCTTTCGCAACTTGAGCAAGCACCACCGCAAGGTACGCTGGCCTCTTAA", + "dna_sequence_length": 2013, + "functions": [ + "putative efflux protein (PET) component of YdhJK efflux pump" + ], + "id": "CDS_1635", + "location": [ + [ + "NC_000913", + 1722121, + "+", + 2013 + ] + ], + "md5": "398876b37b10dded80b0a78c11fd5968", + "parent_gene": "", + "protein_md5": "0e5e79711e0e84c660a564e4fae7fd6e", + "protein_translation": "MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDVYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHTRLPRTSGLARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS", + "protein_translation_length": 670, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005505" + ], + [ + "gene_synonym", + "ECK1642" + ], + [ + "gene_synonym", + "EcoGene:EG13419" + ], + [ + "gene_synonym", + "GI:16129604" + ], + [ + "gene_synonym", + "GeneID:945343" + ], + [ + "gene_synonym", + "JW1638" + ], + [ + "gene_synonym", + "NP_416163.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGD1" + ], + [ + "gene_synonym", + "b1646" + ], + [ + "gene_synonym", + "sodC" + ] + ], + "dna_sequence": "ATGAAACGTTTTAGTCTGGCTATTCTGGCGCTGGTTGTTGCAACCGGCGCACAAGCTGCCAGTGAAAAAGTCGAGATGAACCTCGTCACGTCGCAAGGGGTAGGGCAGTCAATTGGTAGCGTCACCATTACTGAAACCGATAAAGGTCTGGAGTTTTCGCCCGATCTGAAAGCATTACCCCCCGGTGAACATGGCTTCCATATTCATGCCAAAGGAAGCTGCCAGCCAGCCACCAAAGATGGCAAAGCCAGCGCCGCGGAATCCGCAGGCGGGCATCTTGATCCACAAAATACCGGTAAACATGAAGGGCCAGAAGGTGCCGGGCATTTAGGCGATCTGCCTGCACTGGTCGTCAATAATGACGGCAAAGCTACCGATGCCGTCATCGCGCCTCGTCTGAAATCACTGGATGAAATCAAAGACAAAGCGCTGATGGTCCACGTTGGCGGCGATAATATGTCCGATCAACCTAAACCGCTGGGCGGTGGCGGTGAACGCTATGCCTGTGGTGTAATTAAGTAA", + "dna_sequence_length": 522, + "functions": [ + "superoxide dismutase, Cu, Zn, periplasmic" + ], + "id": "CDS_1636", + "location": [ + [ + "NC_000913", + 1724655, + "-", + 522 + ] + ], + "md5": "ec32d2b5fd1a56ca4b617ef5dd11dcb1", + "parent_gene": "", + "protein_md5": "675fa70156ccc6aab6ccbfa67ecfaf15", + "protein_translation": "MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005508" + ], + [ + "gene_synonym", + "ECK1643" + ], + [ + "gene_synonym", + "EcoGene:EG13420" + ], + [ + "gene_synonym", + "GI:49176131" + ], + [ + "gene_synonym", + "GeneID:946960" + ], + [ + "gene_synonym", + "JW1639" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76187" + ], + [ + "gene_synonym", + "YP_025305.1" + ], + [ + "gene_synonym", + "b1647" + ], + [ + "gene_synonym", + "ydhF" + ] + ], + "dna_sequence": "ATGGTTCAGCGTATTACTATTGCGCCGCAAGGCCCGGAGTTTTCCCGTTTTGTGATGGGCTACTGGCGATTGATGGACTGGAATATGTCCGCCCGCCAGCTGGTCAGTTTTATTGAAGAGCATCTGGATCTCGGCGTGACCACCGTGGACCATGCTGATATTTATGGTGGCTATCAGTGCGAAGCGGCGTTTGGCGAGGCACTGAAACTGGCACCTCACCTGCGTGAACGGATGGAAATCGTCAGTAAATGCGGTATCGCGACGACCGCGCGTGAAGAAAACGTCATTGGTCATTACATCACTGACCGCGATCACATCATTAAGAGCGCCGAACAGTCGCTAATTAATCTCGCGACCGATCATCTGGATTTGCTGTTAATCCACCGACCAGACCCGTTAATGGATGCCGATGAAGTGGCGGACGCGTTCAAACATCTGCATCAGAGCGGCAAAGTGCGTCATTTTGGCGTATCGAACTTTACGCCTGCGCAATTTGCCCTGTTGCAATCACGTCTGCCGTTTACCCTTGCCACTAATCAGGTGGAAATATCCCCGGTGCATCAGCCGTTACTGCTGGATGGCACGCTCGACCAACTACAACAACTGCGTGTTCGTCCGATGGCGTGGTCCTGCCTTGGTGGTGGTCGTCTGTTTAATGATGATTATTTCCAGCCGCTGCGTGATGAACTGGCTGTGGTGGCAGAGGAGTTAAACGCGGGCTCGATTGAACAGGTGGTTTACGCCTGGGTATTACGTTTACCATCGCAGCCGCTGCCAATTATCGGTTCAGGTAAAATTGAGCGCGTACGGGCAGCTGTCGAAGCAGAAACACTGAAAATGACCCGTCAACAATGGTTTCGTATCCGTAAAGCGGCACTGGGGTACGACGTACCGTAA", + "dna_sequence_length": 897, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1637", + "location": [ + [ + "NC_000913", + 1725632, + "-", + 897 + ] + ], + "md5": "1495080d6db49e5856bbd4f8972f633d", + "parent_gene": "", + "protein_md5": "260d44bed7fa8dcab1d896019c54f35a", + "protein_translation": "MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005510" + ], + [ + "gene_synonym", + "ECK1644" + ], + [ + "gene_synonym", + "EcoGene:EG13946" + ], + [ + "gene_synonym", + "GI:90111312" + ], + [ + "gene_synonym", + "GeneID:946168" + ], + [ + "gene_synonym", + "JW5827" + ], + [ + "gene_synonym", + "NP_416165.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64474" + ], + [ + "gene_synonym", + "b1648" + ], + [ + "gene_synonym", + "ydhL" + ] + ], + "dna_sequence": "GTGGCGGAGCAATTAGAGTTCTTTCCCGTCCAGAGCCCGTGCCGGGGAATTTGCCAGTCTGACGAACGCGGGTTTTGTCGCGGCTGTTTTCGTAGTCGTGATGAGCGTTTTAACTGGAATAAAATGAGCGATGGCGAAAAACAAGAGGTGCTGCGCCTTTGTCGGCAGCGATTAATGCGCAAATTACGCGCAAATAAGCCAGCGTCATCAGACGAACCGGAGCAACCATCACTCTTTTGA", + "dna_sequence_length": 240, + "functions": [ + "DUF1289 family protein" + ], + "id": "CDS_1638", + "location": [ + [ + "NC_000913", + 1725920, + "-", + 240 + ] + ], + "md5": "f3815d41abe314386f6a8c3d333af844", + "parent_gene": "", + "protein_md5": "7a3620078ab679ba8b98a2f717cce209", + "protein_translation": "MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005514" + ], + [ + "gene_synonym", + "ECK1645" + ], + [ + "gene_synonym", + "EcoGene:EG13947" + ], + [ + "gene_synonym", + "GI:145698269" + ], + [ + "gene_synonym", + "GeneID:946166" + ], + [ + "gene_synonym", + "JW5874" + ], + [ + "gene_synonym", + "NP_416166.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67430" + ], + [ + "gene_synonym", + "b1649" + ], + [ + "gene_synonym", + "nemR" + ], + [ + "gene_synonym", + "ydhM" + ] + ], + "dna_sequence": "ATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACAGTAAAACTCTCTGCCGAAGTGTGCGATCTGTCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAG", + "dna_sequence_length": 600, + "functions": [ + "transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated" + ], + "id": "CDS_1639", + "location": [ + [ + "NC_000913", + 1726023, + "+", + 600 + ] + ], + "md5": "d71da478c32e685ed1a52182eaf4baef", + "parent_gene": "", + "protein_md5": "7ef72b0bab2aa4fe67742c1012ed305f", + "protein_translation": "MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005516" + ], + [ + "gene_synonym", + "ECK1646" + ], + [ + "gene_synonym", + "EcoGene:EG13546" + ], + [ + "gene_synonym", + "GI:16129608" + ], + [ + "gene_synonym", + "GeneID:946164" + ], + [ + "gene_synonym", + "JW1642" + ], + [ + "gene_synonym", + "NP_416167.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77258" + ], + [ + "gene_synonym", + "b1650" + ], + [ + "gene_synonym", + "nemA" + ], + [ + "gene_synonym", + "ydhN" + ] + ], + "dna_sequence": "ATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTATTGAACCGGGTGACATTCCTACCCCGTTGATGGCGGAATACTATCGCCAACGTGCCAGTGCCGGTTTGATTATTAGTGAAGCCACGCAAATTTCTGCCCAGGCAAAAGGATATGCAGGTGCGCCTGGCATCCATAGTCCGGAGCAAATTGCCGCATGGAAAAAAATCACCGCTGGCGTTCATGCTGAAAATGGTCATATGGCCGTGCAGCTGTGGCACACCGGACGCATTTCTCACGCCAGCCTGCAACCTGGCGGTCAGGCACCGGTAGCGCCTTCAGCACTTAGCGCGGGAACACGTACTTCTCTGCGCGATGAAAATGGTCAGGCGATCCGTGTTGAAACATCCATGCCGCGTGCGCTTGAACTGGAAGAGATTCCAGGTATCGTCAATGATTTCCGTCAGGCCATTGCTAACGCGCGTGAAGCCGGTTTTGATCTGGTAGAGCTCCACTCTGCTCACGGTTATTTGCTGCATCAGTTCCTTTCTCCTTCTTCAAACCATCGTACCGATCAGTACGGCGGCAGCGTGGAAAATCGCGCACGTTTGGTACTGGAAGTGGTCGATGCCGGGATTGAAGAATGGGGTGCCGATCGCATTGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTGATGCGGTGGCATTTGGTCGTGACTGGATTGCGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAA", + "dna_sequence_length": 1098, + "functions": [ + "chromate reductase, quinone reductase, FMN-linked", + "N-Ethylmaleimide reductase", + "old yellow enzyme" + ], + "id": "CDS_1640", + "location": [ + [ + "NC_000913", + 1726659, + "+", + 1098 + ] + ], + "md5": "d6dd2a3d71e5af814b1fda64be8d0d04", + "parent_gene": "", + "protein_md5": "63968336180e46a7b732b33ba7812b12", + "protein_translation": "MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFYGGGAEGYTDYPTL", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005520" + ], + [ + "gene_synonym", + "ECK1647" + ], + [ + "gene_synonym", + "EcoGene:EG13421" + ], + [ + "gene_synonym", + "GI:16129609" + ], + [ + "gene_synonym", + "GeneID:946161" + ], + [ + "gene_synonym", + "JW1643" + ], + [ + "gene_synonym", + "NP_416168.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC81" + ], + [ + "gene_synonym", + "b1651" + ], + [ + "gene_synonym", + "gloA" + ] + ], + "dna_sequence": "ATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAGCGAAAACCCGGAATACAAATACTCACTGGCGTTTGTTGGCTACGGCCCGGAAACCGAAGAAGCGGTGATTGAACTGACCTACAACTGGGGCGTGGATAAATACGAACTCGGCACTGCTTATGGTCACATCGCGCTTAGCGTAGATAACGCCGCTGAAGCGTGCGAAAAAATCCGTCAAAACGGGGGTAACGTGACCCGTGAAGCGGGTCCGGTAAAAGGCGGTACTACGGTTATCGCGTTTGTGGAAGATCCGGACGGTTACAAAATTGAGTTAATCGAAGAGAAAGACGCCGGTCGCGGTCTGGGCAACTAA", + "dna_sequence_length": 408, + "functions": [ + "glyoxalase I, Ni-dependent" + ], + "id": "CDS_1641", + "location": [ + [ + "NC_000913", + 1727837, + "+", + 408 + ] + ], + "md5": "0722e10301457dccdfaf73f79d81f680", + "parent_gene": "", + "protein_md5": "eb054aa220e7391b7116f1e08101ae67", + "protein_translation": "MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005523" + ], + [ + "gene_synonym", + "ECK1648" + ], + [ + "gene_synonym", + "EcoGene:EG11547" + ], + [ + "gene_synonym", + "GI:16129610" + ], + [ + "gene_synonym", + "GeneID:946159" + ], + [ + "gene_synonym", + "JW1644" + ], + [ + "gene_synonym", + "NP_416169.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30014" + ], + [ + "gene_synonym", + "b1652" + ], + [ + "gene_synonym", + "rnt" + ] + ], + "dna_sequence": "ATGTCCGATAACGCTCAACTTACCGGTCTGTGCGACCGTTTTCGTGGTTTTTATCCTGTTGTGATCGATGTTGAAACAGCCGGATTTAACGCCAAAACCGATGCGCTGCTTGAGATTGCCGCCATCACCCTGAAAATGGATGAACAAGGCTGGCTGATGCCGGACACCACATTACATTTCCACGTCGAACCATTTGTCGGCGCAAATTTGCAACCAGAAGCCCTCGCCTTCAACGGCATTGACCCGAACGATCCCGATCGCGGCGCGGTCAGCGAATACGAGGCGCTGCACGAAATTTTTAAAGTTGTACGTAAAGGTATTAAAGCGAGCGGCTGTAACCGCGCCATTATGGTGGCGCACAATGCCAATTTTGATCACAGCTTTATGATGGCCGCCGCAGAACGCGCCTCACTGAAACGTAACCCGTTCCACCCTTTCGCCACTTTTGACACTGCTGCACTGGCCGGGCTGGCACTCGGACAAACCGTATTGTCAAAGGCTTGCCAGACCGCTGGCATGGACTTCGACAGCACCCAGGCGCACTCCGCGCTGTACGACACCGAACGCACTGCTGTGCTGTTTTGTGAAATCGTCAACCGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAA", + "dna_sequence_length": 648, + "functions": [ + "RNase T", + "exoribonuclease T", + "structured DNA 3' exonuclease", + "RNA processing", + "DNA repair" + ], + "id": "CDS_1642", + "location": [ + [ + "NC_000913", + 1728347, + "+", + 648 + ] + ], + "md5": "975c7af4d5e2a5e880d750d14676aa46", + "parent_gene": "", + "protein_md5": "3b8b75ad5cd020ba6c360a123b86b45a", + "protein_translation": "MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLSAAEEV", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005525" + ], + [ + "gene_synonym", + "ECK1649" + ], + [ + "gene_synonym", + "EcoGene:EG11548" + ], + [ + "gene_synonym", + "GI:16129611" + ], + [ + "gene_synonym", + "GeneID:946156" + ], + [ + "gene_synonym", + "JW1645" + ], + [ + "gene_synonym", + "NP_416170.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30015" + ], + [ + "gene_synonym", + "b1653" + ], + [ + "gene_synonym", + "lhr" + ], + [ + "gene_synonym", + "rhlF" + ] + ], + "dna_sequence": "ATGGCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGCCCTCGATCGGCTCTTCCGCGAAGGCGGCGAAGATACCCGCGAGGCGCATAAGCGTAAAACCTCACGCATCCTCTATATTTCACCGATAAAAGCCCTGGGCACCGACGTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGACCTCCCGCGCGCGCGAAACGCTACGCGGCGTCGAAACGGTAATTATTGATGAAGTCCACGCGGTAGCGGGCAGTAAACGTGGTGCGCATCTGGCGTTAAGTCTGGAGCGGCTCGATGCGCTGCTCCACACCTCAGCACAGCGAATTGGCCTTTCTGCCACTGTGCGCTCAGCCAGCGATGTGGCAGCATTTCTTGGTGGCGATCGCCCGGTTACGGTAGTCAACCCGCCCGCAATGCGCCATCCGCAGATACGAATTGTCGTACCGGTCGCCAATATGGATGATGTCTCATCGGTCGCCAGCGGCACCGGCGAAGACAGCCATGCCGGCCGGGAAGGCTCCATCTGGCCATATATTGAAACGGGTATCCTTGATGAAGTGTTGCGCCATCGCTCGACCATTGTCTTTACTAATTCGCGGGGGCTGGCGGAAAAACTGACGGCACGATTAAATGAGCTTTACGCCGCACGCTTACAGCGTTCCCCGTCTATCGCCGTTGATGCGGCCCATTTCGAGTCGACCTCCGGCGCAACCTCTAACCGTGTACAAAGTAGCGACGTTTTTATTGCCCGCTCACACCACGGCTCCGTCTCTAAAGAACAACGAGCAATCACCGAACAGGCGCTGAAATCGGGTGAATTACGCTGCGTGGTCGCAACCTCCAGTCTTGAACTGGGGATTGATATGGGCGCGGTGGATCTGGTGATTCAGGTGGCAACGCCGCTTTCTGTTGCCAGTGGGTTACAACGCATTGGTCGCGCCGGACATCAGGTTGGCGGTGTATCTAAAGGGCTGTTTTTCCCCCGTACCCGGCGTGATTTAGTCGATTCCGCAGTCATTGTAGAGTGTATGTTCGCAGGCAGGCTGGAAAACCTGACACCACCGCATAATCCTCTCGACGTCCTTGCGCAGCAAACCGTTGCCGCCGCGGCGATGGATGCATTACAGGTAGACGAATGGTACTCCCGCGTACGCCGTGCCGCACCGTGGAAAGATCTGCCAAGACGTGTTTTTGACGCCACGCTGGATATGCTTTCCGGGCGCTATCCCTCTGGCGATTTTTCTGCTTTTCGCCCCAAACTGGTCTGGAACAGGGAGACCGGGATATTGACCGCCCGACCTGGCGCTCAATTGTTGGCGGTTACCAGCGGCGGCACCATTCCGGATCGTGGCATGTATAGCGTGTTATTACCCGAAGGTGAAGAAAAGGCCGGTTCGCGGCGGGTGGGTGAACTGGATGAGGAGATGGTATATGAGTCGCGGGTGAACGACATTATCACTCTCGGCGCTACCTCATGGCGGATCCAGCAAATCACCCGCGATCAGGTGATTGTGACTCCTGCTCCGGGTCGTTCTGCCCGGCTCCCCTTCTGGCGTGGTGAAGGTAACGGACGTCCGGCTGAATTAGGCGAGATGATCGGCGATTTTCTTCATTTGCTGGCGGATGGCGCGTTCTTTTCCGGGACTATTCCCCCGTGGCTGGCAGAAGAAAATACGATCGCCAATATTCAGGGGTTGATTGAGGAGCAGCGCAACGCGACGGGCATCGTTCCGGGGAGTCGCCATCTGGTCCTCGAACGGTGCCGTGATGAAATTGGTGACTGGCGTATTATTTTGCACTCTCCCTATGGAAGACGGGTGCATGAACCCTGGGCGGTGGCGATTGCCGGGCGAATACATGCGCTATGGGGCGCTGACGCGTCGGTGGTCGCCAGTGATGACGGCATTGTTGCACGTATTCCTGACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCGGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAGTTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCGTACTGTCGCTGGACAGCGAGTTACTGCGCAATCTACTCGGACAGGTCGATCCGGGGGAATTACTCGACCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTGCGCTATCTCCGGGCTCATGCTCTGGTCACGGCTGAACAACTGGCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACCTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGCCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTACGCGACTATTCGTCAGAAATGCTCGATGAATTACTGGCAACCGGTGCGGTTATCTGGTCGGGGCAAAAAAAACTGGGTGAAGATGACGGCCTGGTGGCACTGCATCTACAGGAATATGCTGCAGAATCGTTCACTCCCGCCGAAGCGGATCAGGCGAATCGTTCGGCGCTGCAACAAGCGATAGTCGCTGTTCTGGCTGACGGAGGAGCCTGGTTTGCACAACAAATCAGCCAACGGATACGCGACAAAATCGGCGAATCGGTTGATCTCTCTGCCCTGCAAGAGGCGTTATGGGCGCTGGTCTGGCAAGGCGTCATCACCAGCGACATTTGGGCACCGTTACGCGCCCTCACCCGCAGCAGTTCCAACGCACGCACCTCAACTCGCCGCAGTCACCGGGCTCGTCGTGGACGTCCTGTCTATGCGCAACCCGTCTCGCCGCGGGTATCTTACAACACACCAAATCTGGCTGGACGCTGGTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGTCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCGAGGTCGTTTTGTAGAAGGTCTGGGTGGCGCGCAATTCGCTGAACGTCTGACTATTGACCGATTGCGCGATCTGGCGACACAAGCCACGCAAACGCGCCACTATACACCAGTGGCGCTCTCTGCCAACGATCCGGCTAATGTGTGGGGAAATCTTCTGCCCTGGCCTGCACATCCGGCAACGCTGGTTCCAACGCGTCGGGCGGGTGCGCTGGTGGTCGTTTCTGGCGGCAAATTGTTACTCTATCTGGCGCAAGGTGGCAAAAAAATGCTGGTCTGGCAGGAAAAAGAGGAATTACTCGCCCCAGAGGTTTTCCACGCGCTGACTACCGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAG", + "dna_sequence_length": 4617, + "functions": [ + "putative ATP-dependent helicase" + ], + "id": "CDS_1643", + "location": [ + [ + "NC_000913", + 1729087, + "+", + 4617 + ] + ], + "md5": "d49c077cdca142903b34e4b79d7247b1", + "parent_gene": "", + "protein_md5": "0a8aa5f42ef9efe50ebc988e2391a8e8", + "protein_translation": "MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG", + "protein_translation_length": 1538, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005527" + ], + [ + "gene_synonym", + "ECK1650" + ], + [ + "gene_synonym", + "EcoGene:EG12181" + ], + [ + "gene_synonym", + "GI:16129612" + ], + [ + "gene_synonym", + "GeneID:946169" + ], + [ + "gene_synonym", + "JW1646" + ], + [ + "gene_synonym", + "NP_416171.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC69" + ], + [ + "gene_synonym", + "b1654" + ], + [ + "gene_synonym", + "grxD" + ], + [ + "gene_synonym", + "ydhD" + ] + ], + "dna_sequence": "ATGAGCACCACTATCGAAAAAATCCAACGCCAGATTGCTGAAAACCCGATCCTGCTGTACATGAAAGGTTCACCGAAACTGCCGAGCTGCGGTTTCTCTGCCCAGGCAGTCCAGGCGCTTGCCGCATGTGGCGAACGTTTTGCCTATGTTGATATTCTGCAGAATCCGGACATTCGTGCGGAACTGCCGAAATATGCTAACTGGCCGACCTTCCCGCAACTGTGGGTTGACGGCGAGCTGGTCGGCGGTTGTGATATCGTGATCGAAATGTATCAGCGTGGCGAACTGCAGCAGCTGATCAAAGAAACTGCCGCTAAATACAAGTCTGAAGAGCCGGACGCGGAATAA", + "dna_sequence_length": 348, + "functions": [ + "glutaredoxin-4" + ], + "id": "CDS_1644", + "location": [ + [ + "NC_000913", + 1734101, + "-", + 348 + ] + ], + "md5": "f9b168d01c44255d3a23d0e58f39dd34", + "parent_gene": "", + "protein_md5": "9e5e4071a9d1b9e3765784083543f591", + "protein_translation": "MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005533" + ], + [ + "gene_synonym", + "ECK1651" + ], + [ + "gene_synonym", + "EcoGene:EG13949" + ], + [ + "gene_synonym", + "GI:16129613" + ], + [ + "gene_synonym", + "GeneID:945210" + ], + [ + "gene_synonym", + "JW5270" + ], + [ + "gene_synonym", + "NP_416172.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76190" + ], + [ + "gene_synonym", + "b1655" + ], + [ + "gene_synonym", + "mepH" + ], + [ + "gene_synonym", + "ydhO" + ] + ], + "dna_sequence": "GTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATTGTGTGAAAGTCAAAAATGCCGCGTCAGGAACTCTTGCCGACGCGCACAAAGCGAAGGTGCAAAAAGCTACGAAAGTGGCAATGAATAAACTGATGCAGCAAATTGGTAAGCCATATCGTTGGGGTGGCAGCTCACCGCGTACCGGTTTTGATTGCAGCGGCCTGGTTTATTACGCTTATAAAGATTTGGTGAAAATTCGTATTCCGCGTACGGCGAATGAAATGTATCACCTGCGTGATGCAGCGCCAATCGAACGTAGTGAACTGAAAAACGGCGACCTGGTCTTTTTCCGTACTCAGGGACGCGGCACAGCCGATCATGTCGGCGTGTATGTCGGCAACGGCAAATTTATTCAGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAA", + "dna_sequence_length": 816, + "functions": [ + "murein DD-endopeptidase, space-maker hydrolase" + ], + "id": "CDS_1645", + "location": [ + [ + "NC_000913", + 1734435, + "+", + 816 + ] + ], + "md5": "4cb00f26b65f937216f22933a594752c", + "parent_gene": "", + "protein_md5": "81ca912a28abc180aa1b1ca430b41fb0", + "protein_translation": "MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005537" + ], + [ + "gene_synonym", + "ECK1652" + ], + [ + "gene_synonym", + "EcoGene:EG10954" + ], + [ + "gene_synonym", + "GI:16129614" + ], + [ + "gene_synonym", + "GeneID:944953" + ], + [ + "gene_synonym", + "JW1648" + ], + [ + "gene_synonym", + "NP_416173.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGD3" + ], + [ + "gene_synonym", + "b1656" + ], + [ + "gene_synonym", + "sodB" + ] + ], + "dna_sequence": "ATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATGCTCTGGCACCGCACATTTCTGCGGAAACCATCGAGTATCACTACGGCAAGCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAAGTCGCTGAAGCTATCGCCGCATCTTTTGGCAGCTTTGCCGATTTCAAAGCGCAGTTTACTGATGCAGCGATCAAAAACTTTGGTTCTGGCTGGACCTGGCTGGTGAAAAACAGCGATGGCAAACTGGCTATCGTTTCAACCTCTAACGCGGGTACTCCGCTGACCACCGATGCGACTCCGCTGCTGACCGTTGATGTCTGGGAACACGCTTATTACATCGACTATCGCAATGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAA", + "dna_sequence_length": 582, + "functions": [ + "superoxide dismutase, Fe" + ], + "id": "CDS_1646", + "location": [ + [ + "NC_000913", + 1735378, + "+", + 582 + ] + ], + "md5": "a202fbbabe2407944eeb80fd88836ccc", + "parent_gene": "", + "protein_md5": "ce422a1e705d91080141d9bb318b50ce", + "protein_translation": "MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005540" + ], + [ + "gene_synonym", + "ECK1653" + ], + [ + "gene_synonym", + "EcoGene:EG13950" + ], + [ + "gene_synonym", + "GI:16129615" + ], + [ + "gene_synonym", + "GeneID:947340" + ], + [ + "gene_synonym", + "JW1649" + ], + [ + "gene_synonym", + "NP_416174.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77389" + ], + [ + "gene_synonym", + "b1657" + ], + [ + "gene_synonym", + "ydhP" + ] + ], + "dna_sequence": "ATGAAAATTAACTATCCGTTGCTGGCGCTGGCGATTGGCGCGTTTGGTATCGGGACAACGGAGTTCTCGCCAATGGGCTTGTTGCCCGTCATTGCGCGCGGTGTGGATGTCTCGATTCCCGCTGCCGGAATGTTAATCAGTGCCTATGCAGTTGGCGTAATGGTTGGCGCGCCGCTGATGACGCTTCTACTTTCTCATCGTGCCCGCCGCAGTGCGTTGATTTTCCTGATGGCAATTTTCACGCTCGGCAACGTACTTTCCGCCATCGCGCCGGATTATATGACCCTGATGCTTTCACGCATTTTGACCAGCCTGAATCACGGAGCATTTTTTGGTTTGGGTTCAGTCGTGGCCGCAAGCGTGGTGCCAAAACATAAACAGGCCAGCGCAGTTGCCACTATGTTTATGGGGTTAACCCTGGCAAATATCGGTGGCGTGCCGGCGGCGACCTGGTTGGGTGAAACCATCGGCTGGCGGATGTCATTTCTGGCAACGGCGGGGCTGGGAGTGATTTCAATGGTAAGTCTGTTCTTCTCATTACCTAAAGGTGGTGCAGGGGCACGACCTGAAGTGAAAAAAGAGCTGGCGGTATTAATGCGTCCGCAGGTGCTGTCTGCATTGCTGACGACGGTACTGGGAGCTGGTGCAATGTTTACTCTCTACACCTATATCTCTCCGGTACTGCAAAGTATTACCCACGCAACACCGGTGTTCGTCACGGCAATGCTGGTGCTGATTGGTGTCGGATTCTCTATCGGTAACTATCTCGGCGGCAAACTGGCAGATCGTTCAGTTAACGGCACGTTGAAAGGCTTTTTGTTGTTGTTGATGGTGATTATGCTGGCAATCCCGTTCCTGGCCCGCAATGAGTTCGGCGCAGCTATTAGCATGGTGGTGTGGGGCGCAGCAACCTTTGCGGTCGTACCGCCGTTACAGATGCGCGTGATGCGTGTCGCCAGTGAAGCGCCAGGTCTGTCTTCATCAGTCAATATTGGTGCCTTTAATCTTGGAAATGCGCTGGGAGCAGCTGCTGGTGGTGCGGTAATTTCCGCTGGGCTGGGATACAGCTTTGTGCCGGTGATGGGAGCGATTGTCGCGGGACTGGCATTATTGCTGGTGTTTATGTCAGCCAGAAAACAACCTGAAACAGTTTGCGTTGCTAACAGCTAA", + "dna_sequence_length": 1170, + "functions": [ + "putative MFS transporter, inner membrane protein" + ], + "id": "CDS_1647", + "location": [ + [ + "NC_000913", + 1737290, + "-", + 1170 + ] + ], + "md5": "ff2ce50ea7dedb40edcc3f52074e8f91", + "parent_gene": "", + "protein_md5": "b94787472c3d2d87a2e23da87b76ffa0", + "protein_translation": "MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS", + "protein_translation_length": 389, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4411" + ], + [ + "gene_synonym", + "EcoGene:EG14016" + ], + [ + "gene_synonym", + "GI:145698270" + ], + [ + "gene_synonym", + "GeneID:5061505" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A618" + ], + [ + "gene_synonym", + "YP_001165321.1" + ], + [ + "gene_synonym", + "b4602" + ], + [ + "gene_synonym", + "ynhF" + ] + ], + "dna_sequence": "ATGAGCACCGACCTTAAATTTTCACTGGTAACAACGATTATCGTCCTCGGTTTGATCGTAGCCGTGGGTTTGACTGCCGCGCTGCACTGA", + "dna_sequence_length": 90, + "functions": [ + "stress response membrane" + ], + "id": "CDS_1648", + "location": [ + [ + "NC_000913", + 1737545, + "-", + 90 + ] + ], + "md5": "e3f3c0777ba9f2ac2ce1599d205473a5", + "parent_gene": "", + "protein_md5": "d24a83df46eab571036c92ffce47a289", + "protein_translation": "MSTDLKFSLVTTIIVLGLIVAVGLTAALH", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005545" + ], + [ + "gene_synonym", + "ECK1654" + ], + [ + "gene_synonym", + "EcoGene:EG10800" + ], + [ + "gene_synonym", + "GI:16129616" + ], + [ + "gene_synonym", + "GeneID:945226" + ], + [ + "gene_synonym", + "JW1650" + ], + [ + "gene_synonym", + "NP_416175.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACP7" + ], + [ + "gene_synonym", + "b1658" + ], + [ + "gene_synonym", + "purR" + ] + ], + "dna_sequence": "ATGGCAACAATAAAAGATGTAGCGAAACGAGCAAACGTTTCCACTACAACTGTGTCACACGTGATCAACAAAACACGTTTCGTCGCTGAAGAAACGCGCAACGCCGTGTGGGCAGCGATTAAAGAATTACACTACTCCCCTAGCGCGGTGGCGCGTAGCCTGAAGGTTAACCACACCAAGTCTATCGGTTTGCTGGCGACCAGCAGCGAAGCGGCCTATTTTGCCGAGATCATTGAAGCAGTTGAAAAAAATTGCTTCCAGAAAGGTTACACCCTGATTCTGGGCAATGCGTGGAACAATCTTGAGAAACAGCGGGCTTATCTGTCGATGATGGCGCAAAAACGCGTCGATGGTCTGCTGGTGATGTGTTCTGAGTACCCAGAGCCGTTGCTGGCGATGCTGGAAGAGTATCGCCATATCCCAATGGTGGTCATGGACTGGGGTGAAGCAAAAGCTGACTTCACCGATGCGGTCATTGATAACGCGTTCGAAGGCGGCTACATGGCCGGGCGTTATCTGATTGAACGCGGTCACCGCGAAATCGGCGTCATCCCCGGCCCGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATATCATGGCAATGGGCGCACTTTGTGCTGCTGATGAAATGGGCCTGCGCGTCCCGCAGGATGTTTCGCTGATCGGTTATGATAACGTGCGCAACGCGCGCTATTTTACGCCGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAA", + "dna_sequence_length": 1026, + "functions": [ + "transcriptional repressor, hypoxanthine-binding" + ], + "id": "CDS_1649", + "location": [ + [ + "NC_000913", + 1737844, + "+", + 1026 + ] + ], + "md5": "1483d9445f822f83a381ef7697bb6417", + "parent_gene": "", + "protein_md5": "8772cb040f2b5d7253f583d2f328de82", + "protein_translation": "MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005547" + ], + [ + "gene_synonym", + "ECK1655" + ], + [ + "gene_synonym", + "EcoGene:EG12140" + ], + [ + "gene_synonym", + "GI:16129617" + ], + [ + "gene_synonym", + "GeneID:945208" + ], + [ + "gene_synonym", + "JW1651" + ], + [ + "gene_synonym", + "NP_416176.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACR2" + ], + [ + "gene_synonym", + "b1659" + ], + [ + "gene_synonym", + "ydhB" + ] + ], + "dna_sequence": "ATGTGGTCAGAATATTCACTCGAAGTTGTTGATGCGGTAGCGCGTAATGGTAGTTTTAGCGCTGCGGCACAGGAGCTGCATCGCGTTCCTTCTGCGGTCAGCTATACCGTGCGTCAGCTGGAAGAGTGGCTGGCGGTGCCGCTCTTTGAACGACGGCACCGTGATGTGGAGCTGACCGCTGCTGGAGCGTGGTTTCTCAAAGAAGGGCGCTCTGTTGTCAAAAAAATGCAGATCACCCGCCAGCAATGTCAGCAGATAGCGAACGGCTGGCGCGGTCAGTTAGCTATCGCAGTGGATAATATTGTCAGGCCAGAACGTACACGGCAGATGATCGTTGATTTTTATCGCCATTTTGATGATGTCGAACTTCTTGTCTTTCAGGAAGTGTTCAACGGTGTCTGGGATGCGCTTTCCGACGGGCGCGTGGAACTGGCGATTGGCGCAACACGCGCGATTCCGGTAGGCGGTCGTTATGCCTTCCGGGATATGGGGATGCTAAGCTGGAGTTGCGTTGTTGCCAGTCACCACCCGCTGGCGTTGATGGATGGCCCGTTCAGCGATGATACGTTGCGCAACTGGCCGTCGTTGGTGCGCGAAGACACCTCGCGAACGCTACCTAAACGTATTACCTGGTTGCTGGATAACCAAAAAAGAGTTGTCGTGCCTGACTGGGAATCATCGGCAACCTGTATCTCGGCAGGATTATGCATAGGGATGGTGCCAACACATTTCGCCAAACCGTGGCTTAATGAGGGGAAGTGGGTAGCATTAGAACTGGAAAACCCCTTTCCGGATTCGGCATGTTGTCTGACATGGCAGCAAAATGATATGTCGCCTGCGTTAACCTGGTTGCTTGAGTATCTCGGCGATAGTGAGACGCTGAATAAGGAGTGGCTGCGGGAGCCGGAAGAGACTCCCGCAACGGGTGATTAA", + "dna_sequence_length": 933, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_1650", + "location": [ + [ + "NC_000913", + 1739798, + "-", + 933 + ] + ], + "md5": "79ed377b6016a82ed21b6601f1dfea7c", + "parent_gene": "", + "protein_md5": "0eed03ff499fcc5d2f9d6c4e4d9fc8bc", + "protein_translation": "MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005551" + ], + [ + "gene_synonym", + "ECK1656" + ], + [ + "gene_synonym", + "EcoGene:EG12141" + ], + [ + "gene_synonym", + "GI:49176132" + ], + [ + "gene_synonym", + "GeneID:946077" + ], + [ + "gene_synonym", + "JW1652" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37597" + ], + [ + "gene_synonym", + "YP_025306.1" + ], + [ + "gene_synonym", + "b1660" + ], + [ + "gene_synonym", + "ydhC" + ] + ], + "dna_sequence": "ATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACCGATATGTATCTGCCTGCTTTCGCCGCCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCGGCCATCATGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCGACCTGCTACGTTCTAAAACCTATCGCGGCAACGTGCTGATATACGCAGCCTGTTCAGCCAGTTTTTTTGCATGGCTGACCGGTTCACCGTTCATCCTTAGTGAAATGGGCTACAGCCCGGCAGTTATTGGTTTAAGTTATGTCCCGCAAACTATCGCGTTTCTGATTGGTGGTTATGGCTGTCGCGCCGCGCTGCAGAAATGGCAAGGCAAGCAGTTATTACCGTGGTTGCTGGTGCTGTTTGCTGTCAGCGTCATTGCGACCTGGGCTGCGGGCTTCATTAGCCATGTGTCGCTGGTCGAAATCCTGATCCCATTCTGTGTGATGGCGATTGCCAATGGCGCGATCTACCCTATTGTTGTCGCCCAGGCGCTGCGTCCCTTCCCACACGCAACTGGTCGCGCCGCAGCGTTGCAGAACACTCTTCAACTGGGTCTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATCACACTGA", + "dna_sequence_length": 1212, + "functions": [ + "putative arabinose efflux transporter" + ], + "id": "CDS_1651", + "location": [ + [ + "NC_000913", + 1739911, + "+", + 1212 + ] + ], + "md5": "0250a41b427cb5c5ca6b7e64a86d54ce", + "parent_gene": "", + "protein_md5": "b9d88ba40c66ab5fc336ec43079f49fe", + "protein_translation": "MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFAAIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005555" + ], + [ + "gene_synonym", + "ECK1657" + ], + [ + "gene_synonym", + "EcoGene:EG11531" + ], + [ + "gene_synonym", + "GI:16129619" + ], + [ + "gene_synonym", + "GeneID:944811" + ], + [ + "gene_synonym", + "JW1653" + ], + [ + "gene_synonym", + "NP_416178.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9H7" + ], + [ + "gene_synonym", + "b1661" + ], + [ + "gene_synonym", + "cdfA" + ], + [ + "gene_synonym", + "cfa" + ] + ], + "dna_sequence": "ATGAGTTCATCGTGTATAGAAGAAGTCAGTGTACCGGATGACAACTGGTACCGTATCGCCAACGAATTACTTAGCCGTGCCGGTATAGCCATTAACGGTTCTGCCCCGGCGGATATTCGTGTGAAAAACCCCGATTTTTTTAAACGCGTTCTGCAAGAAGGCTCTTTGGGGTTAGGCGAAAGTTATATGGATGGCTGGTGGGAATGTGACCGACTGGATATGTTTTTTAGCAAAGTCTTACGCGCAGGTCTCGAGAACCAACTCCCCCATCATTTCAAAGACACGCTGCGTATTGCCGGCGCTCGTCTCTTCAATCTGCAGAGTAAAAAACGTGCCTGGATAGTCGGCAAAGAGCATTACGATTTGGGTAATGACTTGTTCAGCCGCATGCTTGATCCCTTCATGCAATATTCCTGCGCTTACTGGAAAGATGCCGATAATCTGGAATCTGCCCAGCAGGCGAAGCTCAAAATGATTTGTGAAAAATTGCAGTTAAAACCAGGGATGCGCGTACTGGATATTGGCTGCGGCTGGGGCGGACTGGCACACTACATGGCATCTAATTATGACGTAAGCGTGGTGGGCGTCACCATTTCTGCCGAACAGCAAAAAATGGCTCAGGAACGCTGTGAAGGCCTGGATGTCACCATTTTGCTGCAAGATTATCGTGACCTGAACGACCAGTTTGATCGTATTGTTTCTGTGGGGATGTTCGAGCACGTCGGACCGAAAAATTACGATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAACCGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTGCTCAGTCCAGCGAACCCCACTTTGTGATGGAAGACTGGCATAACTTCGGTGCTGATTACGATACTACGTTGATGGCGTGGTATGAACGATTCCTCGCCGCATGGCCAGAAATTGCGGATAACTATAGTGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAA", + "dna_sequence_length": 1149, + "functions": [ + "cyclopropane fatty acyl phospholipid synthase, SAM-dependent" + ], + "id": "CDS_1652", + "location": [ + [ + "NC_000913", + 1741413, + "+", + 1149 + ] + ], + "md5": "f491f4c1475c7c3c5709026a0c2944b7", + "parent_gene": "", + "protein_md5": "6a663e41d5a28c7acd663cce9cef41ba", + "protein_translation": "MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005557" + ], + [ + "gene_synonym", + "ECK1658" + ], + [ + "gene_synonym", + "EcoGene:EG11406" + ], + [ + "gene_synonym", + "GI:16129620" + ], + [ + "gene_synonym", + "GeneID:945848" + ], + [ + "gene_synonym", + "JW1654" + ], + [ + "gene_synonym", + "NP_416179.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU8" + ], + [ + "gene_synonym", + "b1662" + ], + [ + "gene_synonym", + "ribC" + ], + [ + "gene_synonym", + "ribE" + ] + ], + "dna_sequence": "ATGTTTACGGGGATTGTACAGGGCACCGCAAAACTGGTGTCGATTGACGAGAAACCAAATTTTCGTACGCATGTGGTGGAGTTACCCGACCACATGCTGGACGGCCTGGAAACCGGTGCTTCCGTGGCGCATAACGGTTGCTGCCTGACCGTGACGGAAATTAACGGCAACCATGTCAGTTTTGACCTGATGAAAGAAACGTTACGCATTACCAATCTTGGCGATTTAAAAGTGGGGGATTGGGTAAACGTTGAGCGTGCGGCGAAATTCAGTGATGAAATTGGCGGACACTTAATGTCAGGTCATATTATGACCACTGCTGAAGTGGCGAAAATATTAACCTCAGAAAATAATCGCCAGATCTGGTTTAAAGTCCAGGATAGTCAGTTGATGAAATATATTCTGTACAAAGGATTTATTGGCATCGACGGTATTAGCCTGACCGTCGGCGAAGTCACGCCAACGCGTTTTTGCGTCCATTTAATTCCGGAAACACTGGAACGCACGACTCTTGGGAAGAAAAAACTTGGCGCACGCGTCAACATTGAAATCGATCCACAAACTCAGGCAGTGGTAGATACGGTAGAACGTGTGCTGGCGGCACGAGAAAATGCCATGAATCAACCAGGCACAGAAGCCTGA", + "dna_sequence_length": 642, + "functions": [ + "riboflavin synthase, alpha subunit" + ], + "id": "CDS_1653", + "location": [ + [ + "NC_000913", + 1743242, + "-", + 642 + ] + ], + "md5": "1e4b55d5068622ca9d3252d7530394e5", + "parent_gene": "", + "protein_md5": "ba36ec06b78cd67ac2924910795c560c", + "protein_translation": "MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005561" + ], + [ + "gene_synonym", + "ECK1659" + ], + [ + "gene_synonym", + "EcoGene:EG12400" + ], + [ + "gene_synonym", + "GI:49176133" + ], + [ + "gene_synonym", + "GeneID:945883" + ], + [ + "gene_synonym", + "JW1655" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37340" + ], + [ + "gene_synonym", + "YP_025307.1" + ], + [ + "gene_synonym", + "b1663" + ], + [ + "gene_synonym", + "mdtK" + ], + [ + "gene_synonym", + "norE" + ], + [ + "gene_synonym", + "norM" + ], + [ + "gene_synonym", + "ydhE" + ] + ], + "dna_sequence": "GTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCTGGCTGGCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTAAACGCGCCCGCTCCATGCGCGATATTCGTAACGAAAAAGGCACCGCAAAACCCGATCCTGCGGTTATGAAACGACTGATTCAACTCGGTTTGCCGATTGCGCTGGCACTGTTCTTTGAAGTGACACTGTTTGCCGTCGTGGCTCTGTTAGTGTCTCCGCTCGGTATTGTTGATGTCGCAGGACACCAGATTGCCCTGAACTTTAGTTCACTAATGTTCGTGCTTCCAATGTCGCTGGCGGCAGCGGTAACTATCCGCGTAGGTTATCGTCTGGGTCAGGGCTCAACGCTGGATGCGCAAACCGCTGCGCGGACCGGGCTTATGGTGGGTGTCTGTATGGCAACCCTGACGGCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAA", + "dna_sequence_length": 1374, + "functions": [ + "multidrug efflux system transporter" + ], + "id": "CDS_1654", + "location": [ + [ + "NC_000913", + 1743457, + "+", + 1374 + ] + ], + "md5": "9053bac41b6fb84dc375dcc89e91b2c3", + "parent_gene": "", + "protein_md5": "bfff930e747c9ec095c3fc7fc7525d37", + "protein_translation": "MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005563" + ], + [ + "gene_synonym", + "ECK1660" + ], + [ + "gene_synonym", + "EcoGene:EG13951" + ], + [ + "gene_synonym", + "GI:16129622" + ], + [ + "gene_synonym", + "GeneID:944851" + ], + [ + "gene_synonym", + "JW1656" + ], + [ + "gene_synonym", + "NP_416181.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77552" + ], + [ + "gene_synonym", + "b1664" + ], + [ + "gene_synonym", + "ydhQ" + ] + ], + "dna_sequence": "ATGGGATCTGATGCGAAAAACTTGATGAGCGACGGGAACGTGCAAATTGTTAAGACCGGCGAGGTCATTGGCGCGACGCAACTTACTGAAGGCGAGTTGATTGTTGAAGCTGGCGGAAGAGCCGAAAATACCGTGGTCACGGGGGCTGGCTGGTTGAAAGTGGCAACCGGTGGGATCGCCAAATGCACACAGTACGGTAACAATGGCACGCTATCGGTCAGCGATGGTGCCATTGCCACAGATATTGTTCAGTCCGAGGGAGGCGCAATTAGTCTCTCTACGCTCGCTACGGTTAATGGCCGCCATCCCGAAGGTGAATTCAGCGTTGATAAAGGTTATGCCTGCGGTTTGTTGCTGGAAAATGGCGGTAACCTGCGTGTACTGGAAGGACATCGCGCGGAAAAAATCATTCTCGATCAAGAGGGCGGCCTGTTGGTTAATGGGACAACCTCAGCGGTCGTGGTAGATGAAGGTGGTGAATTGTTGGTGTATCCAGGTGGGGAAGCCAGCAATTGTGAGATTAATCAGGGCGGCGTTTTTATGCTGGCCGGGAAAGCCAGTGATACGTTGCTTGCTGGTGGCACCATGAATAATCTCGGTGGTGAAGACTCTGACACTATTGTTGAGAATGGATCCATTTATCGTCTGGGGACGGATGGCCTTCAGCTCTACAGTTCCGGTAAGACGCAAAACCTGTCCGTGAATGTGGGTGGTCGGGCTGAAGTGCATGCCGGTACGCTGGAAAACGCGGTAATACAAGGTGGGACAGTGATCCTGTTGTCACCCACCAGCGCGGACGAAAATTTTGTCGTAGAGGAAGATCGCGCACCGGTTGAACTGACCGGGAGTGTTGCATTACTGGACGGCGCTTCAATGATTATTGGTTATGGCGCAGAGCTGCAACAATCAACGATTACTGTACAGCAGGGCGGTGTGTTGATTCTAGACGGCAGTACGGTAAAAGGTGACAGTGTCACTTTCATTGTTGGTAACATCAATCTGAATGGTGGAAAACTGTGGCTGATCACTGATGCGGCAACGCATGTGCAACTGAAAGTGAAACGCCTGCGCGGAGAGGGAGCGATTTGCCTGCAAACCAGTGCAAAAGAAATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAA", + "dna_sequence_length": 1257, + "functions": [ + "autotransporter adhesin-related protein" + ], + "id": "CDS_1655", + "location": [ + [ + "NC_000913", + 1746127, + "-", + 1257 + ] + ], + "md5": "a8bb0cd6baea01beab22d3f3054e87b4", + "parent_gene": "", + "protein_md5": "4d2a0cc7b7a42829648e74396df42212", + "protein_translation": "MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFIVGNINLNGGKLWLITDAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005572" + ], + [ + "gene_synonym", + "ECK1663" + ], + [ + "gene_synonym", + "EcoGene:EG13952" + ], + [ + "gene_synonym", + "GI:16129623" + ], + [ + "gene_synonym", + "GeneID:946177" + ], + [ + "gene_synonym", + "JW1657" + ], + [ + "gene_synonym", + "NP_416182.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX3" + ], + [ + "gene_synonym", + "b1667" + ], + [ + "gene_synonym", + "ydhR" + ] + ], + "dna_sequence": "ATGGCAACTTTGTTACAACTTCATTTTGCTTTTAATGGCCCATTTGGCGACGCAATGGCTGAGCAGCTTAAACCACTTGCTGAGTCGATTAATCAGGAACCTGGTTTTCTGTGGAAGGTATGGACAGAAAGTGAAAAGAACCACGAAGCCGGTGGGATCTACCTTTTCACTGATGAAAAAAGCGCCCTTGCCTATCTGGAAAAACATACTGCCCGACTGAAAAATCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGA", + "dna_sequence_length": 306, + "functions": [ + "putative monooxygenase" + ], + "id": "CDS_1656", + "location": [ + [ + "NC_000913", + 1746700, + "+", + 306 + ] + ], + "md5": "e3e220fb578013c4a4da16f78133bdb1", + "parent_gene": "", + "protein_md5": "3d5216708170fb6b28e34ff38f616c53", + "protein_translation": "MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005575" + ], + [ + "gene_synonym", + "ECK1664" + ], + [ + "gene_synonym", + "EcoGene:EG13953" + ], + [ + "gene_synonym", + "GI:16129624" + ], + [ + "gene_synonym", + "GeneID:945786" + ], + [ + "gene_synonym", + "JW1658" + ], + [ + "gene_synonym", + "NP_416183.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77148" + ], + [ + "gene_synonym", + "b1668" + ], + [ + "gene_synonym", + "ydhS" + ] + ], + "dna_sequence": "ATGAAAAAAATTGCTATTGTGGGTGCCGGGCCTACGGGGATCTACACCTTATTCTCGCTTCTACAGCAACAAACTCCACTTTCTATTTCTATCTTCGAGCAGGCTGACGAGGCCGGTGTCGGGATGCCATACAGTGATGAGGAAAACTCAAAAATGATGCTGGCAAATATTGCCAGTATTGAAATACCGCCGATTTATTGTACGTATCTCGAATGGCTACAAAAGCAAGAAGACAGCCATCTCCAGCGTTATGGCGTTAAAAAAGAAACCTTGCACGATCGTCAGTTTTTACCGCGAATTCTGCTGGGCGAATATTTCCGCGATCAATTTTTACGACTAGTAGACCAGGCACGACAGCAAAAATTTGCAGTGGCTGTTTATGAATCATGCCAGGTTACCGATCTGCAAATTACAAATGCTGGCGTCATGCTCGCTACAAATCAGGATTTACCCAGCGAGACGTTTGATTTAGCGGTGATCGCCACGGGTCACGTCTGGCCTGATGAAGAAGAAGCAACCCGAACGTATTTTCCCAGCCCGTGGTCAGGCCTGATGGAAGCAAAGGTCGATGCGTGTAACGTGGGTATTATGGGAACATCCTTGAGCGGACTGGATGCGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGTATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAATTGTTCCACATCTGAATGAACACGACCATAAACGGTTCAGTAAAGGCCTTGCCCGGGTTTTCATCGATAATTATGCGGCAATCCCTTCAGAGTCTATTCGTCGCCTACTTGCCTTACGTGAAGCGGGAATCATTCATATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATATCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGCCTTTCGTTCAGGGACTTACGGCATGTGCAGAAATTGGTGAGGCGATGGCTCGGGCGGTCGTAAAGCCTGCATCCCGTGCTCGTCGGCGTCTTTCGTTTGATTAA", + "dna_sequence_length": 1605, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1657", + "location": [ + [ + "NC_000913", + 1747131, + "+", + 1605 + ] + ], + "md5": "9a7cce332a92b6967995a45719ff0e2c", + "parent_gene": "", + "protein_md5": "5bce315e3194c261ae740ec3f215e13f", + "protein_translation": "MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPIYCTYLEWLQKQEDSHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLLSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD", + "protein_translation_length": 534, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005577" + ], + [ + "gene_synonym", + "ECK1665" + ], + [ + "gene_synonym", + "EcoGene:EG13954" + ], + [ + "gene_synonym", + "GI:16129625" + ], + [ + "gene_synonym", + "GeneID:945960" + ], + [ + "gene_synonym", + "JW1659" + ], + [ + "gene_synonym", + "NP_416184.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77147" + ], + [ + "gene_synonym", + "b1669" + ], + [ + "gene_synonym", + "ydhT" + ] + ], + "dna_sequence": "ATGATCATTACACAAGCAGACCTGCGAGAATGGCGTATCGGAGCGGTGATGTATCGCTGGTTCCTGCGCCATTTCCCACGCGGCGGTAGTTATGCCGATATTCATCATGCACTGATTGAGGAAGGATATACGGACTGGGCGGAGAGTCTGGTTGAGTATGCGTGGAAAAAATGGCTGGCGGATGAAAACTTCGCGCATCAGGAAGTTTCCTCTATGCAAAAACTGGCCACAGACCCCGGAGAGAGACCATTTTGCAGTCAGTTTGCCCGCAGCGACGATCATGCTCGCATCGGCTGTTGTGAGGATAACGCCAGAATCGCAACCGCTGGGTATGCCGCGCAAATTGCCAGTATGGGTTATAGCGTGCGGATTGGAAGTGTCGGCTTTAACAGTCACATTGGCAGCTCCGGTGAACGCGCACGGGTTGCTGTAACCGGTAATTCTTCGCGGATAAGCAGCGCTGGAGATAGCAGTCGGATTGCGAATACCGGAATGCGAGTACGCGTTTGTACATTGGGTGAACGGTGTCATGTCGCCAGTAATGGTGACCTGGTGCAAATCGCCAGCTTTGGCGCAAACGCCAGAATTGCCAACAGCGGCGACAATGTACACATCATTGCCAGCGGTGAAAATTCAACGGTAGTGAGCACGGGCGTGGTCGACTCAATTATTCTCGGGCCAGGAGGAAGCGCCGCACTGGCATATCATGACGGCGAAAGAGTTCGCTTCGCCGTCGCCATTGAAGGTGAAAACAATATTCGAGCCGGAGTCCGCTATCGTCTTAATGAACAGCATCAGTTTGTTGAGTGCTGA", + "dna_sequence_length": 813, + "functions": [ + "FNR, Nar, NarP-regulated protein", + "putative subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1658", + "location": [ + [ + "NC_000913", + 1749559, + "-", + 813 + ] + ], + "md5": "58df3b83b6965510ce3e3dd33f9fe355", + "parent_gene": "", + "protein_md5": "c9083c2c4cfafbd962587f6eff795f94", + "protein_translation": "MIITQADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005579" + ], + [ + "gene_synonym", + "ECK1666" + ], + [ + "gene_synonym", + "EcoGene:EG13955" + ], + [ + "gene_synonym", + "GI:16129626" + ], + [ + "gene_synonym", + "GeneID:945608" + ], + [ + "gene_synonym", + "JW1660" + ], + [ + "gene_synonym", + "NP_416185.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77409" + ], + [ + "gene_synonym", + "b1670" + ], + [ + "gene_synonym", + "ydhU" + ] + ], + "dna_sequence": "ATGAACCCGTCGCAACATGCTGAACAGTTTCAGAGCCAGTTAGCGAACTATGTGCCACAGTTCACTCCCGAATTTTGGCCGGTGTGGTTGATCATTGCCGGAGTATTGCTGGTTGGGATGTGGTTGGTGCTGGGGCTGCATGCCTTGCTTCGTGCTCGTGGCGTGAAGAAATCAGCCACCGATCATGGTGAGAAGATTTATCTTTACAGCAAAGCGGTCAGATTATGGCACTGGTCGAATGCGTTACTCTTTGTATTGTTGCTGGCCAGTGGGCTGATAAATCACTTTGCGATGGTGGGCGCAACTGCGGTTAAAAGTCTGGTTGCGGTGCATGAAGTTTGCGGATTTTTGTTACTGGCATGCTGGCTCGGCTTTGTGCTGATCAATGCCGTTGGGGATAATGGTCACCACTATCGCATTCGTCGTCAGGGGTGGCTGGAACGAGCGGCAAAACAAACGCGATTTTATTTGTTTGGCATTATGCAGGGGGAAGAACATCCTTTCCCGGCAACAACCCAGTCTAAATTTAATCCCTTACAGCAGGTCGCCTATGTTGGTGTCATGTATGGATTGCTGCCGTTGTTACTATTGACGGGGCTGCTGTGTCTCTATCCGCAAGCCGTGGGAGATGTGTTTCCTGGCGTAAGATACTGGTTATTGCAGACACATTTTGCTCTGGCATTTATAAGCCTCTTTTTTATCTTCGGTCATCTTTATCTTTGCACCACGGGGCGTACGCCACACGAAACCTTTAAAAGCATGGTCGATGGCTATCACCGGCACTAA", + "dna_sequence_length": 786, + "functions": [ + "putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1659", + "location": [ + [ + "NC_000913", + 1750348, + "-", + 786 + ] + ], + "md5": "5b1da29d23eebd1177af5ebc7c9d84c8", + "parent_gene": "", + "protein_md5": "df06c3d4409cd667313baf3465922b55", + "protein_translation": "MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005583" + ], + [ + "gene_synonym", + "ECK1667" + ], + [ + "gene_synonym", + "EcoGene:EG13958" + ], + [ + "gene_synonym", + "GI:226524717" + ], + [ + "gene_synonym", + "GeneID:947308" + ], + [ + "gene_synonym", + "JW5271" + ], + [ + "gene_synonym", + "NP_416186.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77375" + ], + [ + "gene_synonym", + "b1671" + ], + [ + "gene_synonym", + "ydhX" + ] + ], + "dna_sequence": "ATGTCCTTCACTCGACGCAAATTTGTTCTGGGGATGGGAACAGTAATCTTTTTTACTGGTTCTGCGTCTTCTCTGTTAGCGAACACGAGGCAAGAAAAGGAAGTTCGGTATGCCATGATTCATGACGAGTCACGGTGCAATGGCTGTAATATTTGCGCCCGCGCATGCCGTAAAACTAACCACGTCCCCGCTCAGGGAAGCCGTTTATCGATAGCACACATTCCAGTCACCGATAACGACAACGAAACGCAGTATCACTTTTTTCGCCAGTCATGTCAGCACTGCGAAGATGCTCCGTGCATCGACGTTTGCCCGACGGGGGCGTCGTGGCGTGATGAGCAGGGGATCGTGCGGGTAGAAAAATCGCAGTGCATCGGCTGCAGTTATTGCATTGGCGCTTGTCCGTACCAGGTTCGCTACCTTAACCCTGTCACTAAAGTGGCAGATAAATGTGATTTCTGCGCTGAGTCCCGACTGGCAAAAGGCTTTCCGCCCATTTGCGTCAGCGCCTGCCCGGAACACGCATTGATCTTTGGTCGCGAAGATAGCCCAGAAATTCAGGCGTGGTTGCAGCAAAATAAATACTATCAATATCAGCTACCTGGTGCCGGGAAACCGCATCTGTATCGCCGGTTCGGTCAACATTTGATTAAAAAGGAAAATGTATGA", + "dna_sequence_length": 669, + "functions": [ + "putative 4Fe-4S ferridoxin-type protein", + "FNR, Nar, NarP-regulated protein", + "putative subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1660", + "location": [ + [ + "NC_000913", + 1751013, + "-", + 669 + ] + ], + "md5": "a6138dcfc4029d9aafa1e5291ee2dca5", + "parent_gene": "", + "protein_md5": "c3ec4eda5abc6d90ba89a312af7becf9", + "protein_translation": "MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005585" + ], + [ + "gene_synonym", + "ECK1668" + ], + [ + "gene_synonym", + "EcoGene:EG13957" + ], + [ + "gene_synonym", + "GI:16129628" + ], + [ + "gene_synonym", + "GeneID:947180" + ], + [ + "gene_synonym", + "JW1662" + ], + [ + "gene_synonym", + "NP_416187.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77564" + ], + [ + "gene_synonym", + "b1672" + ], + [ + "gene_synonym", + "ydhW" + ] + ], + "dna_sequence": "ATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATGGTTGCAGGGGATGCGTCACCCCGTTGATACGGTAACCGAACCAGAACCTGCTGAAATCCTGGCTGAGTTCATTCGCCAGCATTCTGCGGCTGGGCAGCTGGTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGAGTGAAAACTACGCGGCGATGTCTTTGCAAGTTGTGGAGCAGGACATTTGTCGCGCCATTGCACACGCCGTTCGTTTTGAGTGCCAGACGTATCCTCGTCCTTACAAAGTCGCCATGCTGATGCAAGCGCCATATTACTTCCAGGAAGCGCAGATTGAAGCCGCGATCGCCGCGATGGATGTTGCACCTGAATATGCCGATATACGGCAGGTGGAGTCATCGACGGCGGTGTTGTACTTGTTTAGCGAGCGATTTATGACCTATGGCAAGGCTTATGGCTTATGCGAATGGTTCGAGGTAGAGCAGTTTCAGAACCCCTGA", + "dna_sequence_length": 648, + "functions": [ + "FNR, Nar, NarP-regulated protein", + "putative subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1661", + "location": [ + [ + "NC_000913", + 1751724, + "-", + 648 + ] + ], + "md5": "29bcd51d227a0cfc063382f40105b9b4", + "parent_gene": "", + "protein_md5": "b63f693f0ca98253b7ebec9a077a33da", + "protein_translation": "MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005587" + ], + [ + "gene_synonym", + "ECK1669" + ], + [ + "gene_synonym", + "EcoGene:EG13956" + ], + [ + "gene_synonym", + "GI:16129629" + ], + [ + "gene_synonym", + "GeneID:948756" + ], + [ + "gene_synonym", + "JW5272" + ], + [ + "gene_synonym", + "NP_416188.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76192" + ], + [ + "gene_synonym", + "b1673" + ], + [ + "gene_synonym", + "ydhV" + ] + ], + "dna_sequence": "ATGGCTAACGGTTGGACAGGTAATATATTAAGAGTCAATCTCACGACAGGAAATATTACCCTCGAAGATTCCAGTAAGTTTAAAAGTTTTGTCGGTGGCATGGGCTTCGGCTACAAAATTATGTATGACGAAGTACCGCCAGGCACGAAACCTTTCGATGAAGCGAATAAATTAGTCTTTGCTACCGGCCCATTAACTGGATCTGGTGCCCCCTGTAGTTCTCGCGTAAATATCACCTCACTTTCTACTTTTACCAAAGGAAATTTAGTCGTCGATGCCCATATGGGTGGCTTTTTTGCAGCGCAAATGAAATTCGCTGGATACGACGTCATTATTATCGAAGGGAAGGCGAAATCACCGGTATGGCTGAAGATTAAAGATGACAAAGTTAGCCTGGAAAAAGCCGATTTCTTATGGGGAAAAGGGACGCGCGCAACGACGGAAGAAATTTGTCGATTGACCAGTCCGGAAACCTGTGTGGCGGCTATTGGTCAGGCTGGGGAAAACCTTGTTCCTCTCTCTGGCATGTTGAATAGCCGTAACCACAGCGGCGGTGCGGGAACTGGCGCAATAATGGGTTCGAAAAACCTGAAAGCGATTGCGGTTGAAGGGACGAAAGGGGTCAACATTGCCGATCGTCAGGAGATGAAGCGTCTCAATGATTACATGATGACTGAACTTATTGGTGCGAATAACAACCATGTCGTGCCAAGTACGCCACAATCGTGGGCAGAGTATTCAGATCCCAAGTCACGCTGGACAGCACGTAAAGGGCTGTTTTGGGGCGCGGCTGAAGGTGGTCCGATTGAAACGGGTGAAATTCCGCCAGGCAATCAGAATACGGTCGGCTTTCGTACCTATAAATCCGTTTTTGACTTAGGACCGGCGGCAGAGAAATACACAGTAAAAATGAGCGGCTGCCACTCTTGCCCGATCCGTTGTATGACCCAAATGAATATTCCTCGGGTGAAAGAGTTTGGCGTGCCCAGCACAGGTGGTAACACTTGTGTAGCAAACTTTGTCCATACCACCATCTTCCCGAACGGGCCGAAAGATTTTGAAGATAAAGACGATGGTCGTGTGATTGGTAACCTGGTGGGTCTGAATTTGTTCGATGACTACGGCCTATGGTGTAACTACGGGCAGTTGCATCGCGACTTTACTTATTGTTACAGCAAAGGTGTGTTCAAGCGTGTTCTGCCAGCTGAAGAGTATGCAGAAATTCGCTGGGATCAACTGGAAGCGGGTGACGTTAACTTCATTAAAGATTTTTACTACCGTCTGGCGCATCGTGTGGGTGAGCTGAGTCACCTGGCTGATGGTTCATATGCCATCGCAGAACGCTGGAATTTGGGTGAAGAGTACTGGGGCTACGCGAAAAATAAACTCTGGTCGCCGTTTGGCTATCCGGTTCACCATGCCAATGAAGCGTCAGCGCAGGTCGGTTCCATTGTTAACTGTATGTTCAACCGTGACTGCATGACGCATACCCATATCAACTTTATTGGTTCCGGCTTGCCATTGAAACTGCAACGTGAAGTGGCGAAAGAACTTTTTGGTTCTGAAGATGCTTACGATGAAACCAAAAACTACACGCCAATCAATGACGCAAAAATTAAATATGCAAAGTGGTCGCTGTTGCGGGTCTGTTTGCATAACGCCGTCACCCTGTGCAACTGGGTCTGGCCAATGACCGTTTCGCCGCTGAAAAGCCGTAATTACCGGGGCGATCTGGCGCTTGAAGCCAAATTCTTCAAAGCGATCACCGGCGAAGAGATGACTCAGGAAAAATTAGATTTAGCTGCAGAGCGTATTTTTACGTTGCATCGTGCCTACACGGTAAAACTGATGCAAACCAAAGATATGCGTAATGAACACGATCTTATCTGTTCCTGGGTATTCGACAAGGATCCGCAGATCCCGGTCTTTACTGAAGGTACTGACAAAATGGATCGTGACGATATGCATGCTTCGCTCACGATGTTCTACAAAGAAATGGGCTGGGACCCACAGCTTGGTTGTCCAACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAA", + "dna_sequence_length": 2103, + "functions": [ + "putative oxidoreductase subunit" + ], + "id": "CDS_1662", + "location": [ + [ + "NC_000913", + 1753830, + "-", + 2103 + ] + ], + "md5": "32a71c67ccd3c76ea23a47a30ff7ca13", + "parent_gene": "", + "protein_md5": "ef2e143cfd89f0c82097ffe59f9ab5d5", + "protein_translation": "MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA", + "protein_translation_length": 700, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005589" + ], + [ + "gene_synonym", + "ECK1670" + ], + [ + "gene_synonym", + "EcoGene:EG13959" + ], + [ + "gene_synonym", + "GI:16129630" + ], + [ + "gene_synonym", + "GeneID:948749" + ], + [ + "gene_synonym", + "JW1664" + ], + [ + "gene_synonym", + "NP_416189.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAL6" + ], + [ + "gene_synonym", + "b1674" + ], + [ + "gene_synonym", + "ydhY" + ] + ], + "dna_sequence": "ATGAACCCGGTTGATCGTCCACTATTAGATATTGGCTTAACGCGATTAGAATTCTTGCGTATATCAGGAAAAGGCCTTGCTGGTCTAACAATTGCCCCTGCGTTACTGTCACTTTTGGGTTGCAAACAGGAAGATATTGATAGCGGCACAGTAGGGTTGATAAATACCCCCAAAGGGGTGCTGGTGACCCAGCGAGCGCGATGCACGGGTTGCCACCGCTGTGAAATCTCTTGTACCAACTTCAACGATGGCTCAGTAGGGACATTCTTCTCCCGTATCAAAATCCATCGCAATTATTTCTTTGGCGACAACGGGGTTGGCTCTGGCGGCGGCCTGTATGGCGATCTCAACTATACCGCGGACACCTGCCGTCAATGCAAAGAGCCGCAATGCATGAACGTCTGCCCGATTGGTGCGATTACCTGGCAGCAGAAAGAAGGCTGTATTACCGTCGATCATAAACGCTGTATTGGCTGTAGCGCCTGTACTACGGCATGCCCGTGGATGATGGCCACCGTAAATACCGAAAGTAAAAAATCCTCGAAATGTGTGTTATGCGGTGAATGCGCAAACGCCTGCCCAACAGGGGCGTTAAAAATTATCGAGTGGAAAGATATTACTGTGTGA", + "dna_sequence_length": 627, + "functions": [ + "putative 4Fe-4S ferridoxin-type protein", + "FNR, Nar, NarP-regulated protein", + "putative subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1663", + "location": [ + [ + "NC_000913", + 1754477, + "-", + 627 + ] + ], + "md5": "f7b49974a2fdf2e8b811095726ff26c8", + "parent_gene": "", + "protein_md5": "402741319af64e184ea35a8795010119", + "protein_translation": "MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005591" + ], + [ + "gene_synonym", + "ECK1671" + ], + [ + "gene_synonym", + "EcoGene:EG13960" + ], + [ + "gene_synonym", + "GI:16129631" + ], + [ + "gene_synonym", + "GeneID:946180" + ], + [ + "gene_synonym", + "JW1665" + ], + [ + "gene_synonym", + "NP_416190.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX5" + ], + [ + "gene_synonym", + "b1675" + ], + [ + "gene_synonym", + "ydhZ" + ] + ], + "dna_sequence": "ATGGGAAATCGGACAAAAGAGGATGAACTGTACCGAGAAATGTGCAGAGTTGTCGGTAAAGTTGTGCTGGAAATGCGCGATCTGGGGCAGGAACCAAAGCATATTGTTATCGCAGGCGTATTACGTACAGCATTAGCCAATAAACGCATTCAGCGCAGTGAGCTGGAAAAGCAGGCGATGGAAACCGTCATTAACGCACTGGTAAAATGA", + "dna_sequence_length": 210, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1664", + "location": [ + [ + "NC_000913", + 1755141, + "-", + 210 + ] + ], + "md5": "7babd1490ff47f37e7afe376dca3a803", + "parent_gene": "", + "protein_md5": "cec23b87dbcb2822c751fda67bdbd9a6", + "protein_translation": "MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005600" + ], + [ + "gene_synonym", + "ECK1672" + ], + [ + "gene_synonym", + "EcoGene:EG10804" + ], + [ + "gene_synonym", + "GI:16129632" + ], + [ + "gene_synonym", + "GeneID:946179" + ], + [ + "gene_synonym", + "JW1666" + ], + [ + "gene_synonym", + "NP_416191.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD61" + ], + [ + "gene_synonym", + "b1676" + ], + [ + "gene_synonym", + "pykF" + ] + ], + "dna_sequence": "ATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCTGCTTCCTTTATTCGTAAGCGTTCTGACGTTATCGAAATCCGTGAGCACCTGAAAGCGCACGGCGGCGAAAACATCCACATCATCTCCAAAATCGAAAACCAGGAAGGCCTCAACAACTTCGACGAAATCCTCGAAGCCTCTGACGGCATCATGGTTGCGCGTGGCGACCTGGGTGTAGAAATCCCGGTAGAAGAAGTTATCTTCGCCCAGAAGATGATGATCGAAAAATGTATCCGTGCACGTAAAGTCGTTATCACTGCGACCCAGATGCTGGATTCCATGATCAAAAACCCACGCCCGACTCGCGCAGAAGCCGGTGACGTTGCAAACGCCATCCTCGACGGTACTGACGCAGTGATGCTGTCTGGTGAATCCGCAAAAGGTAAATACCCGCTGGAAGCGGTTTCTATCATGGCGACCATCTGCGAACGTACCGACCGCGTGATGAACAGCCGTCTCGAGTTCAACAATGACAACCGTAAACTGCGCATTACCGAAGCGGTATGCCGTGGTGCCGTTGAAACTGCTGAAAAACTGGATGCTCCGCTGATCGTGGTTGCTACTCAGGGCGGTAAATCTGCTCGCGCAGTACGTAAATACTTCCCGGATGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAA", + "dna_sequence_length": 1413, + "functions": [ + "pyruvate kinase I" + ], + "id": "CDS_1665", + "location": [ + [ + "NC_000913", + 1755698, + "+", + 1413 + ] + ], + "md5": "a49b882620c94ee269d0560248d389c0", + "parent_gene": "", + "protein_md5": "b364e47c26991e4e943e4d21553d6140", + "protein_translation": "MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005603" + ], + [ + "gene_synonym", + "ECK1673" + ], + [ + "gene_synonym", + "EcoGene:EG10544" + ], + [ + "gene_synonym", + "GI:16129633" + ], + [ + "gene_synonym", + "GeneID:946175" + ], + [ + "gene_synonym", + "JW1667" + ], + [ + "gene_synonym", + "NP_416192.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69776" + ], + [ + "gene_synonym", + "b1677" + ], + [ + "gene_synonym", + "lpp" + ], + [ + "gene_synonym", + "mlpA" + ], + [ + "gene_synonym", + "mulI" + ] + ], + "dna_sequence": "ATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAA", + "dna_sequence_length": 237, + "functions": [ + "murein lipoprotein" + ], + "id": "CDS_1666", + "location": [ + [ + "NC_000913", + 1757421, + "+", + 237 + ] + ], + "md5": "713dd4ca8fd6514578592d463a9df5f1", + "parent_gene": "", + "protein_md5": "45b221a7f65fe18aefeef1bec5704c51", + "protein_translation": "MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005605" + ], + [ + "gene_synonym", + "ECK1674" + ], + [ + "gene_synonym", + "EcoGene:EG14015" + ], + [ + "gene_synonym", + "GI:16129634" + ], + [ + "gene_synonym", + "GeneID:946174" + ], + [ + "gene_synonym", + "JW1668" + ], + [ + "gene_synonym", + "NP_416193.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76193" + ], + [ + "gene_synonym", + "b1678" + ], + [ + "gene_synonym", + "ldtE" + ], + [ + "gene_synonym", + "ynhG" + ] + ], + "dna_sequence": "ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCCGCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCTATTGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACGACGATAACTATTCCTTCACAACTGTTATTACCTGATGCACCGCGTCAGGGGATTATCGTTAACCTTGCAGAGCTGCGCCTTTATTATTATCCGCCGGGAGAAAATATTGTGCAGGTTTATCCAATAGGTATTGGATTGCAGGGGCTGGAAACGCCGGTGATGGAAACGCGTGTTGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCAGGCATTCGTCAGCGTTCGCTGGAGCGTGGCATTAAATTACCGCCAGTCGTTCCTGCCGGACCAAATAACCCGCTAGGACGTTACGCACTGCGCCTCGCGCATGGTAATGGCGAATACCTCATTCATGGTACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCAGGGTGTATTCGCATGAATGCACCGGATATTAAAGCCTTGTTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCCGTGGAGCCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCGGCAGAAGAACAGCAGAACGTTCAGACAATGCCATACACACTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATCGTCGGGCAGGGTATCCGGTTTCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAGAATGGTGAACCAGAGCAAGGGAATATGTTACGCGTGACGCAGTAG", + "dna_sequence_length": 1005, + "functions": [ + "murein L,D-transpeptidase" + ], + "id": "CDS_1667", + "location": [ + [ + "NC_000913", + 1758725, + "-", + 1005 + ] + ], + "md5": "92865597bb4bdf19eae2cf442c07ca96", + "parent_gene": "", + "protein_md5": "fc16d21863509e2edc9c05fefd49e5a3", + "protein_translation": "MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRVTQ", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005608" + ], + [ + "gene_synonym", + "ECK1675" + ], + [ + "gene_synonym", + "EcoGene:EG13961" + ], + [ + "gene_synonym", + "GI:16129635" + ], + [ + "gene_synonym", + "GeneID:946173" + ], + [ + "gene_synonym", + "JW1669" + ], + [ + "gene_synonym", + "NP_416194.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76194" + ], + [ + "gene_synonym", + "b1679" + ], + [ + "gene_synonym", + "sufE" + ], + [ + "gene_synonym", + "ynhA" + ] + ], + "dna_sequence": "ATGGCTTTATTGCCGGATAAAGAAAAGTTGCTGCGTAATTTTTTACGCTGCGCCAACTGGGAAGAGAAATATCTCTACATTATTGAGCTGGGCCAGCGTCTGCCAGAATTACGCGACGAAGACAGAAGTCCACAAAATAGCATTCAGGGCTGTCAGAGTCAGGTGTGGATTGTCATGCGCCAGAATGCCCAGGGAATTATTGAATTACAGGGCGACAGCGATGCGGCGATTGTGAAAGGGCTTATTGCGGTCGTCTTTATTCTCTACGATCAGATGACGCCGCAGGATATTGTCAATTTCGATGTGCGTCCGTGGTTTGAAAAAATGGCGCTCACCCAACATCTCACCCCATCTCGTTCACAAGGTCTGGAAGCGATGATTCGCGCAATTCGCGCCAAAGCCGCTGCACTTAGCTAA", + "dna_sequence_length": 417, + "functions": [ + "sulfur acceptor protein" + ], + "id": "CDS_1668", + "location": [ + [ + "NC_000913", + 1759290, + "-", + 417 + ] + ], + "md5": "7fee5706c4271848f03b77bf968c3074", + "parent_gene": "", + "protein_md5": "dc99204c6e5810e9f78af9d17059f883", + "protein_translation": "MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005610" + ], + [ + "gene_synonym", + "ECK1676" + ], + [ + "gene_synonym", + "EcoGene:EG13962" + ], + [ + "gene_synonym", + "GI:16129636" + ], + [ + "gene_synonym", + "GeneID:946185" + ], + [ + "gene_synonym", + "JW1670" + ], + [ + "gene_synonym", + "NP_416195.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77444" + ], + [ + "gene_synonym", + "b1680" + ], + [ + "gene_synonym", + "csdB" + ], + [ + "gene_synonym", + "sufS" + ], + [ + "gene_synonym", + "ynhB" + ] + ], + "dna_sequence": "ATGATTTTTTCCGTCGACAAAGTGCGGGCCGACTTTCCGGTGCTTTCGCGTGAGGTAAACGGTTTGCCGCTGGCTTATCTCGACAGCGCCGCCAGTGCGCAGAAACCGAGCCAGGTGATTGACGCCGAGGCCGAGTTTTATCGTCATGGCTACGCGGCGGTGCATCGTGGTATTCATACCTTAAGCGCCCAGGCGACCGAGAAAATGGAGAACGTGCGCAAGCGGGCATCGCTGTTTATTAATGCCCGTTCGGCGGAAGAGCTGGTGTTCGTCCGCGGCACGACGGAAGGGATCAATCTGGTCGCCAATAGCTGGGGCAACAGCAACGTGCGGGCGGGCGATAACATCATCATCAGTCAGATGGAGCACCACGCTAACATTGTTCCCTGGCAGATGCTTTGCGCACGCGTTGGCGCAGAGCTGCGTGTGATCCCGCTCAATCCCGATGGTACGTTGCAACTGGAGACGCTGCCTACGCTGTTTGATGAGAAAACTCGCCTGCTGGCAATTACTCATGTCTCCAACGTGCTTGGCACAGAAAATCCACTGGCGGAAATGATCACGCTTGCGCACCAGCATGGCGCAAAAGTGCTGGTGGATGGCGCTCAGGCGGTGATGCATCATCCGGTGGATGTTCAGGCGCTGGATTGCGACTTTTACGTGTTCTCCGGGCATAAACTGTATGGCCCCACCGGAATTGGCATTCTTTATGTGAAAGAAGCCTTGTTGCAGGAGATGCCGCCGTGGGAAGGGGGCGGTTCTATGATCGCCACCGTCAGCCTGAGTGAAGGCACTACCTGGACCAAAGCACCATGGCGGTTTGAAGCCGGTACACCCAATACCGGGGGCATCATTGGTCTTGGCGCGGCGCTGGAGTATGTTTCGGCGCTGGGGCTTAATAACATAGCCGAGTATGAACAGAATCTGATGCATTATGCGCTATCACAGCTGGAATCTGTACCGGATCTCACTCTCTATGGCCCACAAAACAGGCTTGGCGTTATTGCTTTTAATCTCGGTAAACACCACGCCTATGATGTTGGCAGTTTTCTCGATAATTACGGCATTGCTGTGCGTACCGGACATCACTGCGCAATGCCATTGATGGCCTATTACAACGTCCCTGCGATGTGTCGGGCGTCGCTGGCCATGTATAACACCCATGAAGAAGTGGATCGTCTGGTGACCGGCCTGCAACGTATTCACCGTTTGCTGGGATAA", + "dna_sequence_length": 1221, + "functions": [ + "cysteine desulfurase, stimulated by SufE", + "selenocysteine lyase, PLP-dependent" + ], + "id": "CDS_1669", + "location": [ + [ + "NC_000913", + 1760523, + "-", + 1221 + ] + ], + "md5": "97c9d8999e5ff4d33b732b505de852b3", + "parent_gene": "", + "protein_md5": "6a33e5c8c2abab8244d78c7dafdeb0fe", + "protein_translation": "MIFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005617" + ], + [ + "gene_synonym", + "ECK1677" + ], + [ + "gene_synonym", + "EcoGene:EG13963" + ], + [ + "gene_synonym", + "GI:16129637" + ], + [ + "gene_synonym", + "GeneID:944878" + ], + [ + "gene_synonym", + "JW1671" + ], + [ + "gene_synonym", + "NP_416196.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77689" + ], + [ + "gene_synonym", + "b1681" + ], + [ + "gene_synonym", + "sufD" + ], + [ + "gene_synonym", + "ynhC" + ] + ], + "dna_sequence": "ATGGCTGGCTTACCGAACAGCAGTAACGCGCTGCAACAGTGGCATCACTTGTTTGAAGCTGAAGGGACAAAACGCTCCCCGCAAGCACAGCAGCATTTACAACAATTGCTGCGTACCGGACTGCCGACACGTAAACATGAAAACTGGAAATATACGCCGCTGGAAGGGCTGATCAATAGCCAGTTTGTCAGCATTGCGGGAGAGATATCCCCACAGCAGCGTGATGCCTTAGCGTTAACGTTAGACTCCGTGCGGCTGGTGTTTGTCGATGGGCGTTACGTGCCCGCACTGAGCGATGCAACTGAAGGCAGCGGATATGAAGTGAGCATTAACGACGACCGTCAGGGTTTACCCGACGCTATTCAGGCGGAAGTGTTTCTGCATTTGACGGAAAGCCTGGCACAAAGCGTGACGCATATCGCCGTGAAGCGCGGTCAACGGCCGGCAAAGCCATTGCTGTTAATGCATATCACCCAGGGCGTGGCAGGTGAAGAGGTGAACACTGCCCATTACCGACATCATCTGGATCTGGCGGAAGGTGCCGAAGCAACGGTGATCGAACATTTTGTCAGCCTGAATGATGCTCGTCATTTTACCGGGGCACGGTTCACTATCAACGTCGCAGCGAATGCCCACTTGCAGCATATCAAGCTGGCGTTTGAAAACCCGCTCAGTCACCACTTTGCTCATAACGATTTGTTGCTGGCTGAGGATGCCACCGCATTTAGCCACAGTTTCCTGCTGGGTGGCGCAGTGTTACGACACAACACCAGTACGCAACTCAATGGCGAAAACAGCACGCTGCGGATCAATAGCCTGGCGATGCCGGTGAAAAACGAGGTGTGTGATACCCGTACCTGGCTGGAACACAATAAAGGTTTTTGTAACAGCCGACAGTTGCACAAAACTATCGTCAGCGACAAAGGCCGCGCGGTATTTAACGGTTTGATCAACGTCGCGCAGCACGCCATCAAAACGGATGGTCAGATGACCAACAACAATCTGCTGATGGGCAAACTGGCGGAAGTGGATACGAAACCGCAGCTGGAAATCTATGCAGATGATGTGAAATGCAGCCACGGCGCGACGGTGGGGCGTATTGATGATGAACAGATATTCTATCTGCGCTCGCGCGGGATCAATCAGCAGGATGCCCAGCAGATGATCATTTACGCCTTCGCTGCCGAACTGACGGAAGCACTGCGTGATGAGGGGCTTAAACAGCAGGTGCTGGCCCGAATCGGTCAACGGCTGCCAGGAGGTGCAAGATGA", + "dna_sequence_length": 1272, + "functions": [ + "component of SufBCD Fe-S cluster assembly scaffold" + ], + "id": "CDS_1670", + "location": [ + [ + "NC_000913", + 1761791, + "-", + 1272 + ] + ], + "md5": "a9dfe01ed41ec2eb829b7fc50c18370a", + "parent_gene": "", + "protein_md5": "d96aa1288e0ede85da4731e1dd49e54f", + "protein_translation": "MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPGGAR", + "protein_translation_length": 423, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005619" + ], + [ + "gene_synonym", + "ECK1678" + ], + [ + "gene_synonym", + "EcoGene:EG13964" + ], + [ + "gene_synonym", + "GI:16129638" + ], + [ + "gene_synonym", + "GeneID:946128" + ], + [ + "gene_synonym", + "JW1672" + ], + [ + "gene_synonym", + "NP_416197.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77499" + ], + [ + "gene_synonym", + "b1682" + ], + [ + "gene_synonym", + "sufC" + ], + [ + "gene_synonym", + "ynhD" + ] + ], + "dna_sequence": "ATGTTAAGTATTAAAGATTTACACGTCAGCGTGGAAGATAAAGCTATCCTGCGCGGATTAAGCCTCGACGTTCATCCCGGCGAAGTTCACGCCATTATGGGGCCAAACGGTTCGGGCAAAAGTACCTTATCGGCAACGCTTGCCGGGCGAGAAGATTATGAAGTGACGGGCGGCACGGTTGAGTTCAAAGGCAAAGATTTGCTTGCGCTGTCGCCGGAAGATCGCGCGGGCGAAGGCATCTTTATGGCCTTCCAGTATCCGGTGGAGATTCCAGGTGTCAGTAACCAGTTTTTCCTGCAAACGGCACTTAATGCGGTGCGCAGCTATCGCGGCCAGGAAACGCTCGACCGCTTTGATTTTCAGGATTTGATGGAAGAGAAAATCGCTCTCCTGAAGATGCCGGAAGATTTATTAACCCGTTCGGTAAACGTTGGTTTTTCCGGCGGCGAGAAAAAGCGCAACGATATTTTGCAAATGGCGGTGCTGGAACCGGAGTTATGCATTCTTGATGAGTCGGACTCCGGGCTGGATATTGACGCATTAAAAGTGGTCGCCGATGGCGTGAACTCGCTGCGTGATGGCAAGCGCTCATTCATCATTGTTACGCACTACCAACGCATTCTCGACTACATCAAGCCTGATTACGTTCATGTGCTATATCAGGGACGAATTGTGAAATCCGGCGATTTCACGTTGGTCAAACAACTGGAGGAGCAGGGTTATGGCTGGCTTACCGAACAGCAGTAA", + "dna_sequence_length": 747, + "functions": [ + "SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein" + ], + "id": "CDS_1671", + "location": [ + [ + "NC_000913", + 1762512, + "-", + 747 + ] + ], + "md5": "9f24b923b71b910479fbfc8c80a68bc8", + "parent_gene": "", + "protein_md5": "660b93b6747e9755fb79718e03d4ac64", + "protein_translation": "MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005621" + ], + [ + "gene_synonym", + "ECK1679" + ], + [ + "gene_synonym", + "EcoGene:EG13965" + ], + [ + "gene_synonym", + "GI:90111315" + ], + [ + "gene_synonym", + "GeneID:945753" + ], + [ + "gene_synonym", + "JW5273" + ], + [ + "gene_synonym", + "NP_416198.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77522" + ], + [ + "gene_synonym", + "b1683" + ], + [ + "gene_synonym", + "sufB" + ], + [ + "gene_synonym", + "ynhE" + ] + ], + "dna_sequence": "ATGTCTCGTAATACTGAAGCAACTGACGATGTCAAAACCTGGACCGGCGGCCCGCTGAATTATAAAGAAGGATTCTTCACCCAGTTAGCCACCGATGAGCTGGCAAAGGGGATAAACGAAGAGGTGGTGCGCGCAATTTCGGCGAAGCGTAATGAGCCGGAGTGGATGCTGGAGTTTCGTCTAAACGCCTATCGCGCATGGCTGGAGATGGAAGAACCGCACTGGTTGAAAGCGCACTACGACAAGCTGAATTATCAGGATTACAGCTACTACTCAGCACCATCGTGCGGTAATTGTGACGACACTTGCGCGTCTGAACCTGGCGCGGTGCAGCAAACTGGCGCGAACGCCTTTTTAAGTAAAGAGGTGGAGGCGGCGTTTGAGCAGTTGGGCGTTCCCGTGCGGGAAGGCAAAGAGGTGGCGGTGGATGCCATTTTCGACTCAGTTTCGGTTGCCACTACTTATCGCGAAAAACTGGCGGAGCAGGGAATTATTTTCTGTTCCTTTGGTGAGGCGATCCACGATCACCCGGAACTGGTGCGTAAATATCTCGGCACCGTGGTGCCGGGGAATGACAACTTCTTTGCCGCGCTTAATGCGGCGGTAGCCTCTGATGGTACGTTTATTTATGTGCCTAAAGGCGTGCGCTGCCCGATGGAACTTTCCACCTATTTTCGCATTAACGCAGAAAAAACCGGGCAGTTTGAGCGCACCATTCTGGTGGCCGACGAAGACAGCTACGTCAGCTACATTGAAGGCTGTTCCGCTCCGGTGCGTGACAGCTATCAGTTACACGCGGCAGTGGTGGAAGTCATCATCCATAAAAACGCCGAGGTGAAATATTCCACGGTACAAAACTGGTTTCCTGGCGATAACAACACCGGCGGTATTCTCAACTTCGTCACCAAGCGTGCTTTGTGCGAAGGCGAAAACAGCAAAATGTCATGGACGCAATCAGAAACCGGGTCAGCGATTACGTGGAAATATCCCAGCTGCATTTTGCGCGGCGATAACTCCATTGGTGAGTTTTACTCAGTGGCGCTGACCAGCGGTCATCAGCAAGCGGATACCGGCACCAAGATGATCCACATCGGTAAAAACACCAAATCGACCATTATCTCGAAAGGGATCTCTGCCGGACATAGTCAGAACAGTTATCGCGGCTTAGTGAAAATCATGCCGACGGCAACCAATGCGCGCAATTTCACTCAGTGCGACTCAATGCTGATTGGCGCTAATTGTGGGGCGCATACCTTCCCGTATGTTGAGTGTCGTAACAATAGTGCGCAACTGGAACACGAGGCAACGACATCACGTATTGGTGAAGATCAACTGTTTTACTGCCTGCAACGCGGGATCAGCGAAGAAGACGCCATCTCGATGATTGTTAACGGTTTCTGCAAAGACGTGTTCTCGGAGCTGCCGTTGGAATTTGCCGTTGAAGCACAAAAACTCCTCGCCATCAGTCTTGAACACAGCGTCGGATAA", + "dna_sequence_length": 1488, + "functions": [ + "component of SufBCD Fe-S cluster assembly scaffold" + ], + "id": "CDS_1672", + "location": [ + [ + "NC_000913", + 1764009, + "-", + 1488 + ] + ], + "md5": "7cced5997298641ad1c4c785ffbc177d", + "parent_gene": "", + "protein_md5": "0bc077e6469b6ffa4f275bbec990e95e", + "protein_translation": "MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005624" + ], + [ + "gene_synonym", + "ECK1680" + ], + [ + "gene_synonym", + "EcoGene:EG11378" + ], + [ + "gene_synonym", + "GI:16129640" + ], + [ + "gene_synonym", + "GeneID:949014" + ], + [ + "gene_synonym", + "JW1674" + ], + [ + "gene_synonym", + "NP_416199.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77667" + ], + [ + "gene_synonym", + "b1684" + ], + [ + "gene_synonym", + "sufA" + ], + [ + "gene_synonym", + "ydiC" + ] + ], + "dna_sequence": "ATGGACATGCATTCAGGAACCTTTAACCCACAAGATTTCGCCTGGCAAGGCTTAACGCTGACACCCGCAGCGGCGATACACATCCGTGAGCTGGTGGCAAAGCAGCCGGGTATGGTCGGCGTGCGCTTAGGCGTGAAGCAAACGGGCTGCGCGGGCTTTGGCTATGTGCTCGACAGTGTTAGCGAGCCGGACAAAGACGATCTGCTGTTTGAACACGACGGCGCGAAGCTGTTTGTCCCGCTGCAAGCGATGCCGTTTATTGATGGCACGGAAGTCGATTTCGTTCGTGAAGGACTTAATCAGATATTCAAATTTCACAACCCTAAAGCCCAGAATGAATGTGGCTGTGGCGAAAGCTTTGGGGTATAG", + "dna_sequence_length": 369, + "functions": [ + "Fe-S cluster assembly protein" + ], + "id": "CDS_1673", + "location": [ + [ + "NC_000913", + 1764386, + "-", + 369 + ] + ], + "md5": "ecf5c0bf671d1acc0e27835ffb22e138", + "parent_gene": "", + "protein_md5": "03ae0c2783e02563669bdfa97ca19a67", + "protein_translation": "MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESFGV", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005626" + ], + [ + "gene_synonym", + "ECK1682" + ], + [ + "gene_synonym", + "EcoGene:EG13967" + ], + [ + "gene_synonym", + "GI:226524718" + ], + [ + "gene_synonym", + "GeneID:946194" + ], + [ + "gene_synonym", + "JW1675" + ], + [ + "gene_synonym", + "NP_416200.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64476" + ], + [ + "gene_synonym", + "b1685" + ], + [ + "gene_synonym", + "ydiH" + ] + ], + "dna_sequence": "ATGTCTACTCAACTTGATCCCACCCAGCTGGCCATTGAATTTTTACGCCGTGACCAGAGCAATCTTTCACCTGCCCAATATCTCAAACGTCTGAAACAACTAGAACTTGAATTTGCTGACCTGCTTACTCTCTCTTCTGCTGAATTAAAAGAAGAAATCTACTTTGCCTGGCGTCTGGGCGTGCATTGA", + "dna_sequence_length": 189, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1674", + "location": [ + [ + "NC_000913", + 1765122, + "-", + 189 + ] + ], + "md5": "1e315fcf6d145b63c861dd049c283139", + "parent_gene": "", + "protein_md5": "37bdf2d308438ce9698e92c189bf8cb3", + "protein_translation": "MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005628" + ], + [ + "gene_synonym", + "ECK1683" + ], + [ + "gene_synonym", + "EcoGene:EG13968" + ], + [ + "gene_synonym", + "GI:16129642" + ], + [ + "gene_synonym", + "GeneID:946190" + ], + [ + "gene_synonym", + "JW1676" + ], + [ + "gene_synonym", + "NP_416201.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77781" + ], + [ + "gene_synonym", + "b1686" + ], + [ + "gene_synonym", + "menI" + ], + [ + "gene_synonym", + "ydiI" + ] + ], + "dna_sequence": "ATGATATGGAAACGGAAAATCACCCTGGAAGCACTGAATGCTATGGGTGAAGGAAACATGGTGGGGTTCCTGGATATTCGCTTTGAACATATTGGTGATGACACCCTTGAAGCGACAATGCCAGTAGACTCGCGGACAAAGCAGCCTTTCGGGTTGCTGCATGGAGGAGCATCCGTGGTACTGGCCGAAAGTATCGGTTCCGTTGCCGGTTATTTATGTACCGAAGGTGAGCAAAAAGTGGTTGGTCTGGAAATCAATGCTAACCACGTCCGCTCGGCACGAGAAGGGCGGGTGCGCGGCGTATGCAAACCGTTGCATCTCGGTTCGCGTCACCAGGTCTGGCAGATTGAAATCTTCGATGAGAAAGGGCGTTTGTGCTGTTCGTCACGATTGACGACCGCCATTTTGTGA", + "dna_sequence_length": 411, + "functions": [ + "1,4-dihydroxy-2-naphthoyl-CoA hydrolase" + ], + "id": "CDS_1675", + "location": [ + [ + "NC_000913", + 1765632, + "-", + 411 + ] + ], + "md5": "9d62aa1359e61a1e36c346d46a088d2e", + "parent_gene": "", + "protein_md5": "e2c9322164568340796281692e9f16a2", + "protein_translation": "MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005632" + ], + [ + "gene_synonym", + "ECK1684" + ], + [ + "gene_synonym", + "EcoGene:EG13969" + ], + [ + "gene_synonym", + "GI:16129643" + ], + [ + "gene_synonym", + "GeneID:946189" + ], + [ + "gene_synonym", + "JW1677" + ], + [ + "gene_synonym", + "NP_416202.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77748" + ], + [ + "gene_synonym", + "b1687" + ], + [ + "gene_synonym", + "ydiJ" + ] + ], + "dna_sequence": "ATGATTCCACAGATTTCCCAGGCACCCGGCGTCGTTCAACTGGTGCTTAATTTTTTGCAAGAGCTGGAGCAACAAGGTTTTACCGGCGATACGGCGACAAGTTATGCCGATCGTCTGACAATGTCGACCGACAACAGTATTTACCAACTTCTCCCCGATGCGGTGGTATTTCCGCGTTCAACCGCAGATGTGGCGCTGATCGCCCGTCTTGCCGCGCAGGAACGCTATTCATCGCTGATCTTTACCCCCCGCGGCGGCGGCACCGGCACTAACGGTCAGGCGCTCAACCAGGGGATTATTGTTGATATGTCCCGCCATATGAACCGCATCATCGAAATTAACCCTGAAGAGGGCTGGGTGCGCGTTGAGGCCGGGGTGATAAAAGATCAACTCAATCAGTACCTGAAACCGTTCGGCTACTTTTTTGCGCCGGAACTTTCGACCAGCAACCGGGCAACGCTCGGTGGGATGATCAATACCGATGCATCCGGTCAGGGATCGCTGGTCTATGGCAAAACGTCAGATCACGTACTTGGCGTACGCGCGGTGTTGTTGGGGGGCGATATTCTCGATACGCAACCTTTACCCGTCGAATTGGCGGAAACGCTGGGTAAATCCAATACCACAATCGGGCGAATTTATAACACGGTTTATCAACGTTGCCGTCAGCAACGCCAGTTAATTATCGACAACTTCCCCAAACTTAACCGCTTTCTTACCGGTTACGATCTGCGTCATGTCTTTAACGATGAGATGACCGAGTTCGACCTGACGCGCATTCTGACGGGTTCAGAAGGGACGCTGGCCTTTATTACCGAAGCGCGGCTGGATATTACACGCTTGCCTAAAGTGCGCCGTCTGGTGAACGTCAAATATGACTCTTTTGACTCTGCGCTGCGTAACGCGCCGTTTATGGTTGAGGCGCGGGCGCTTTCGGTAGAGACGGTGGACTCAAAAGTGCTGAATCTGGCGCGGGAAGATATTGTCTGGCATTCCGTCAGCGAGTTGATTACCGATGTGCCTGACCAAGAGATGCTCGGGCTGAACATTGTGGAATTTGCTGGTGATGATGAGGCGCTGATTGATGAGCGGGTAAATGCACTCTGTGCGCGGTTGGATGAGCTGATCGCCAGTCATCAAGCAGGTGTCATCGGCTGGCAGGTGTGCCGTGAGCTGGCGGGGGTTGAACGTATCTATGCAATGCGCAAAAAAGCCGTTGGTCTGCTTGGCAATGCCAAAGGTGCCGCTAAGCCAATTCCGTTTGCTGAGGATACCTGCGTACCGCCGGAACACCTGGCGGATTATATTGCTGAATTTCGCGCGCTGCTCGACAGCCACGGCTTAAGCTACGGTATGTTCGGTCACGTCGACGCAGGTGTCTTGCACGTCCGTCCAGCGCTGGATATGTGCGATCCTCAACAAGAGATTTTGATGAAGCAAATCTCTGATGACGTGGTGGCGCTGACTGCGAAATACGGTGGTTTGTTGTGGGGCGAGCACGGCAAAGGTTTTCGCGCTGAATACAGCCCGGCGTTTTTCGGTGAGGAACTTTTTGCAGAACTGCGCAAAGTGAAAGCGGCATTTGACCCGCATAACCGACTCAACCCAGGGAAGATTTGCCCGCCAGAAGGTCTCGATGCGCCGATGATGAAAGTGGACGCGGTGAAGCGCGGTACATTCGATCGGCAGATCCCCATTGCGGTACGCCAGCAGTGGCGCGGTGCGATGGAGTGTAACGGCAACGGTTTATGCTTCAACTTTGATGCCCGTAGTCCGATGTGTCCGTCGATGAAGATCACCCAGAACCGGATTCATTCACCGAAAGGGCGCGCAACGCTGGTGCGTGAATGGCTGCGTTTGTTGGCGGATCGCGGCGTTGATCCACTCAAACTGGAACAAGAACTGCCTGAATCCGGCGTCAGTTTGCGGACGTTAATTGCCCGCACGCGCAATAGCTGGCATGCGAATAAAGGCGAATATGACTTCTCACACGAAGTCAAAGAGGCGATGTCGGGCTGTCTGGCCTGTAAAGCGTGTTCGACCCAGTGCCCCATCAAAATTGATGTGCCGGAGTTTCGCTCTCGTTTTCTGCAGCTCTATCACACCCGTTATTTACGCCCGCTGCGCGACCACCTCGTCGCTACGGTCGAGAGCTACGCGCCGCTGATGGCACGCGCGCCGAAAACCTTTAACTTCTTCATTAACCAGCCGCTGGTGCGCAAACTCTCGGAAAAACATATCGGCATGGTTGATTTGCCGCTGCTGTCGGTCCCCTCGCTACAACAACAAATGGTGGGGCATCGCTCGGCAAACATGACGCTGGAACAGCTTGAATCTCTCAATGCAGAGCAGAAAGCGCGCACAGTGTTGGTGGTGCAGGACCCCTTTACCAGCTATTACGATGCGCAAGTGGTGGCGGATTTTGTCCGTCTGGTCGAAAAATTAGGTTTCCAGCCTGTGTTACTGCCATTTTCGCCAAATGGCAAAGCCCAGCATATTAAAGGTTTTCTTAATCGTTTTGCGAAGACGGCGAAAAAGACGGCGGATTTCCTCAACCGTATGGCGAAGCTGGGTATGCCAATGGTGGGCGTCGATCCGGCGCTGGTACTTTGTTATCGCGATGAATATAAACTGGCGCTGGGCGAGGAGCGTGGCGAGTTTAACGTCTTACTGGCGAATGAATGGCTGGCAAGCGCACTTGAGTCACAGCCAGTGGCTACAGTCAGCGGTGAATCATGGTATTTCTTTGGTCACTGTACCGAAGTTACCGCCTTGCCGGGTGCGCCAGCACAATGGGCCGCGATATTTGCCCGTTTTGGCGCGAAACTGGAAAATGTCAGCGTGGGTTGCTGCGGCATGGCAGGGACTTACGGACATGAAGCGAAAAACCATGAAAATTCGCTCGGGATCTATGAGTTATCCTGGCATCAGGCTATGCAGCGACTGCCGCGTAACCGCTGTCTGGCGACCGGATATTCCTGCCGTAGCCAGGTAAAACGGGTTGAAGGCACGGGGGTACGCCATCCTGTGCAGGCTTTACTGGAGATTATTAAATGA", + "dna_sequence_length": 3057, + "functions": [ + "putative FAD-linked oxidoreductase" + ], + "id": "CDS_1676", + "location": [ + [ + "NC_000913", + 1768685, + "-", + 3057 + ] + ], + "md5": "327b9eb386924f91bd61b76552d894c1", + "parent_gene": "", + "protein_md5": "7ac95aa26abcf7a0626b36dc9ce59384", + "protein_translation": "MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK", + "protein_translation_length": 1018, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005637" + ], + [ + "gene_synonym", + "ECK1685" + ], + [ + "gene_synonym", + "EcoGene:EG13970" + ], + [ + "gene_synonym", + "GI:16129644" + ], + [ + "gene_synonym", + "GeneID:946183" + ], + [ + "gene_synonym", + "JW1678" + ], + [ + "gene_synonym", + "NP_416203.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS7" + ], + [ + "gene_synonym", + "b1688" + ], + [ + "gene_synonym", + "ydiK" + ] + ], + "dna_sequence": "ATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCCATCATGATTGTGGCATGTCTGTGGATTGTTCAACCCTTTATTCTCGGCTTTGCATGGGCCGGTACGGTGGTTATCGCCACCTGGCCGGTATTGTTACGTTTGCAAAAGATCATGTTTGGCCGCCGCTCTCTCGCCGTTCTGGTGATGACGCTGTTATTAGTGATGGTGTTTATCATCCCTATTGCTTTGCTGGTTAACAGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGGCGCGGTGAACAGGTGGCACAAGGCATTCGCCATTTTGCAACCCGTCTGGCAGGCGTTCGCGGAGATGCCGCCGTGCTGCTGGCGGCACAGGCTATCCGCGCGGTGGCGCTGGGTGTGGTGGTGACGGCGTTAGTACAGGCAGTGCTTGGCGGTATCGGCCTCGCCGTATCCGGCGTACCTTATGCAACGTTGCTAACGGTGTTAATGATCCTCTCCTGCCTTGTCCAGCTTGGCCCGTTGCCGGTACTGATTCCGGCGATTATCTGGCTCTACTGGACTGGCGATACCACCTGGGGAACGGTATTGTTAGTGTGGAGCGGTGTGGTTGGCACGCTGGATAACGTCATCCGCCCAATGTTAATTCGCATGGGTGCCGATTTACCGCTGATCCTGATTCTCTCTGGCGTTATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAA", + "dna_sequence_length": 1113, + "functions": [ + "UPF0118 family inner membrane protein" + ], + "id": "CDS_1677", + "location": [ + [ + "NC_000913", + 1769074, + "+", + 1113 + ] + ], + "md5": "2d174ebbc940c9bb14c3646972266428", + "parent_gene": "", + "protein_md5": "94908636efdf36c16faa3c2ed0674250", + "protein_translation": "MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005641" + ], + [ + "gene_synonym", + "ECK1687" + ], + [ + "gene_synonym", + "EcoGene:EG13971" + ], + [ + "gene_synonym", + "GI:90111316" + ], + [ + "gene_synonym", + "GeneID:946181" + ], + [ + "gene_synonym", + "JW1679" + ], + [ + "gene_synonym", + "NP_416204.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76196" + ], + [ + "gene_synonym", + "b1689" + ], + [ + "gene_synonym", + "ydiL" + ] + ], + "dna_sequence": "ATGAACGCTTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTGGCGTCAGTGGGAAAATGGCAAGTGTGCCATTCCTGATCGTGTAGTCGAGCAACTGTTGGCTATGCGTCAGCAAAGAAAAAAACATCTTCATGCCATCATAGAGAAAATAAATAACCGCATCGGCAACAACACCATGCGTTTTTTCCCCGACTTAACCGCATTTCAACGAGTCTACCCTGATGGCAATTTTATTGACTGGAAGATCTATCAATCGGTAGCTGCTGAATTATATGCACACGATCTGGAGCGGCTTTGTTAA", + "dna_sequence_length": 357, + "functions": [ + "putative HTH domain DNA-binding protein" + ], + "id": "CDS_1678", + "location": [ + [ + "NC_000913", + 1770615, + "+", + 357 + ] + ], + "md5": "179e83f3ada194f0353256b943abdde6", + "parent_gene": "", + "protein_md5": "6b278f8cbf949d55f7766a6113ae157a", + "protein_translation": "MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIPDRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005645" + ], + [ + "gene_synonym", + "ECK1688" + ], + [ + "gene_synonym", + "EcoGene:EG13972" + ], + [ + "gene_synonym", + "GI:16129646" + ], + [ + "gene_synonym", + "GeneID:946196" + ], + [ + "gene_synonym", + "JW1680" + ], + [ + "gene_synonym", + "NP_416205.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76197" + ], + [ + "gene_synonym", + "b1690" + ], + [ + "gene_synonym", + "ydiM" + ] + ], + "dna_sequence": "ATGAAAAATCCCTATTTCCCTACCGCACTTGGGTTGTATTTTAATTACCTGGTGCATGGTATGGGCGTCCTTTTGATGAGCCTGAATATGGCCTCGCTGGAGACACTTTGGCAGACTAATGCCGCGGGTGTCTCGATAGTTATCTCATCGCTGGGCATTGGTCGATTAAGTGTCTTGCTTTTTGCAGGATTATTATCCGATCGCTTTGGTCGCCGCCCTTTTATCATGCTCGGGATGTGCTGCTATATGGCCTTCTTTTTTGGCATCCTGCAGACCAATAACATCATTATCGCTTATGTTTTTGGCTTTCTGGCGGGAATGGCAAACAGTTTTCTCGATGCAGGCACTTATCCCAGTTTGATGGAAGCTTTTCCACGCTCACCTGGGACAGCCAATATTTTAATTAAAGCATTTGTTTCCAGCGGACAATTTTTATTACCGCTAATCATTAGCCTGTTAGTGTGGGCTGAACTGTGGTTCGGTTGGTCCTTTATGATTGCTGCAGGCATTATGTTTATTAACGCTCTGTTTTTATACCGTTGTACGTTCCCACCCCATCCGGGTCGTCGCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCAGTTATACCTTATATGGCTATATCTCAATGGCAACGTTTTATCTGGTTAGCCAGTGGCTGGCACAGTACGGACAATTTGTTGCAGGCATGTCATACACTATGTCGATCAAACTACTCAGTATCTACACCGTGGGTTCGCTGCTTTGTGTATTTATTACCGCTCCACTCATTCGTAATACCGTTCGCCCAACAACATTACTGATGCTGTACACCTTTATCTCATTTATTGCTCTGTTTACCGTCTGCCTGCATCCCACATTTTATGTGGTGATAATATTTGCTTTTGTCATTGGTTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACGTTAATGGCTGAACGTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGTATTGCGACCTTTACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATCACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAA", + "dna_sequence_length": 1215, + "functions": [ + "putative MFS transporter, membrane protein" + ], + "id": "CDS_1679", + "location": [ + [ + "NC_000913", + 1771071, + "+", + 1215 + ] + ], + "md5": "38e52c734b5a744b09bd295c67e45b82", + "parent_gene": "", + "protein_md5": "199ca642f96356d145f963169ae4d78c", + "protein_translation": "MKNPYFPTALGLYFNYLVHGMGVLLMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLLFAGLLSDRFGRRPFIMLGMCCYMAFFFGILQTNNIIIAYVFGFLAGMANSFLDAGTYPSLMEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMFINALFLYRCTFPPHPGRRLPVIKKTTSSTEHRCSIIDLASYTLYGYISMATFYLVSQWLAQYGQFVAGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALFTVCLHPTFYVVIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSAGSIATFTIPLITAHLSQRSIADIMWFDTAIAAIGFLLALFIGLRSRKKTRHHSLKENVAPGG", + "protein_translation_length": 404, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005648" + ], + [ + "gene_synonym", + "ECK1689" + ], + [ + "gene_synonym", + "EcoGene:EG13973" + ], + [ + "gene_synonym", + "GI:226524719" + ], + [ + "gene_synonym", + "GeneID:946198" + ], + [ + "gene_synonym", + "JW5274" + ], + [ + "gene_synonym", + "NP_416206.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76198" + ], + [ + "gene_synonym", + "b1691" + ], + [ + "gene_synonym", + "ydiN" + ] + ], + "dna_sequence": "ATGTCTCAAAATAAGGCTTTCAGCACGCCATTTATCCTGGCTGTTCTTTGTATTTACTTCAGCTACTTCCTGCACGGCATTAGTGTTATTACGCTTGCCCAAAATATGTCATCTCTGGCGGAAAAGTTTTCCACTGACAACGCGGGCATTGCCTACTTAATTTCCGGTATCGGTTTGGGGCGATTGATCAGTATTTTATTCTTCGGTGTGATCTCCGATAAGTTTGGTCGTCGGGCGGTGATATTAATGGCAGTAATAATGTATCTGCTATTCTTCTTTGGTATTCCCGCTTGCCCGAATTTAACTCTCGCCTACGGTCTGGCAGTGTGCGTAGGTATCGCTAACTCAGCGCTGGATACGGGTGGCTACCCCGCGCTCATGGAATGCTTTCCGAAAGCCTCTGGTTCGGCGGTCATACTGGTTAAAGCGATGGTGTCATTTGGGCAAATGTTCTACCCAATGCTGGTGAGCTATATGTTGCTCAATAATATCTGGTACGGCTATGGGCTGATTATTCCGGGTATTCTATTTGTACTGATCACGCTGATGCTGTTGAAAAGCAAATTCCCCAGCCAGTTGGTGGACGCCAGCGTAACTAATGAATTACCGCAAATGAACAGCAAACCGTTAGTCTGGCTGGAAGGTGTTTCATCGGTACTGTTCGGTGTAGCCGCATTCTCGACCTTTTATGTGATTGTGGTGTGGATGCCCAAATATGCGATGGCTTTTGCTGGTATGTCAGAAGCTGAGGCATTAAAAACCATCTCTTATTACAGTATGGGCTCGTTGGTCTGTGTCTTTATTTTTGCCGCACTACTGAAAAAAATGGTCCGGCCCATCTGGGCTAATGTATTTAACTCTGCACTGGCAACAATAACAGCAGCCATTATCTACCTGTACCCTTCTCCACTGGTGTGCAATGCCGGAGCCTTTGTTATCGGTTTCTCAGCAGCTGGCGGCATTTTACAGCTCGGCGTTTCGGTCATGTCAGAGTTTTTTCCCAAAAGCAAAGCCAAAGTCACCAGTATTTATATGATGATGGGTGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATTTTGCACCCGGTTAAACACAATTAAGCATAGAGGTTAA", + "dna_sequence_length": 1266, + "functions": [ + "putative MFS transporter, membrane protein" + ], + "id": "CDS_1680", + "location": [ + [ + "NC_000913", + 1772512, + "+", + 1266 + ] + ], + "md5": "5ca870b05911d6254b034b0559a18375", + "parent_gene": "", + "protein_md5": "3ddd81c2d109298cbcfb775bf22c0328", + "protein_translation": "MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVTNELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFCTRLNTIKHRG", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005651" + ], + [ + "gene_synonym", + "ECK1690" + ], + [ + "gene_synonym", + "EcoGene:EG11234" + ], + [ + "gene_synonym", + "GI:16129648" + ], + [ + "gene_synonym", + "GeneID:946200" + ], + [ + "gene_synonym", + "JW1682" + ], + [ + "gene_synonym", + "NP_416207.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6D5" + ], + [ + "gene_synonym", + "b1692" + ], + [ + "gene_synonym", + "ydiB" + ] + ], + "dna_sequence": "ATGGATGTTACCGCAAAATACGAATTGATTGGGTTGATGGCCTATCCTATCCGCCACAGTTTATCGCCCGAAATGCAGAATAAAGCCTTAGAAAAAGCGGGATTGCCATTTACCTATATGGCCTTCGAAGTGGATAACGATAGCTTTCCTGGAGCAATTGAAGGATTAAAAGCCCTCAAAATGCGCGGAACTGGTGTATCGATGCCGAACAAACAACTGGCGTGTGAATATGTTGATGAATTAACACCAGCTGCCAAACTGGTGGGGGCCATCAACACCATCGTTAATGATGATGGCTATCTGCGTGGCTATAACACCGACGGCACGGGCCATATTCGCGCCATTAAAGAGAGCGGTTTTGATATCAAAGGCAAAACGATGGTGCTGTTAGGGGCCGGTGGTGCCTCAACGGCAATTGGCGCGCAGGGGGCAATTGAAGGTTTAAAAGAAATTAAACTCTTTAACCGTCGGGATGAGTTCTTCGATAAAGCCCTCGCCTTCGCGCAGCGGGTTAATGAAAACACCGATTGTGTCGTCACGGTCACCGATCTCGCCGATCAGCAAGCCTTTGCTGAAGCCCTGGCTTCCGCCGACATTTTAACCAATGGCACAAAAGTGGGTATGAAACCCCTTGAGAATGAATCATTGGTTAATGATATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAGTTCACATTATGGACTGGCAAAGATTTCCCTCTGGAATATGTTAAACAGGTCATGGGGTTCGGTGCCTGA", + "dna_sequence_length": 867, + "functions": [ + "quinate/shikimate 5-dehydrogenase, NAD(P)-binding" + ], + "id": "CDS_1681", + "location": [ + [ + "NC_000913", + 1773789, + "+", + 867 + ] + ], + "md5": "a276dd09d71a43af48848cfb0fa2adf7", + "parent_gene": "", + "protein_md5": "7aefe9d44cfe2be509938a25c6cc7fee", + "protein_translation": "MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005653" + ], + [ + "gene_synonym", + "ECK1691" + ], + [ + "gene_synonym", + "EcoGene:EG10076" + ], + [ + "gene_synonym", + "GI:16129649" + ], + [ + "gene_synonym", + "GeneID:946210" + ], + [ + "gene_synonym", + "JW1683" + ], + [ + "gene_synonym", + "NP_416208.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05194" + ], + [ + "gene_synonym", + "aroD" + ], + [ + "gene_synonym", + "b1693" + ] + ], + "dna_sequence": "ATGAAAACCGTAACTGTAAAAGATCTCGTCATTGGTACGGGCGCACCTAAAATCATCGTCTCGCTGATGGCGAAAGATATCGCCAGCGTGAAATCCGAAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGTTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATCAGGTTAAAGAAACCGTCGCCTACGCCCACGCGCATGATGTGAAAGTAGTCATGTCCAACCATGACTTCCATAAAACGCCGGAAGCCGAAGAAATCATTGCCCGTCTGCGCAAAATGCAATCCTTCGACGCCGATATTCCTAAGATTGCGCTGATGCCGCAAAGTACCAGCGATGTGCTGACGTTGCTTGCCGCGACCCTGGAGATGCAGGAGCAGTATGCCGATCGTCCAATTATCACGATGTCGATGGCAAAAACTGGCGTAATTTCTCGTCTGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAA", + "dna_sequence_length": 759, + "functions": [ + "3-dehydroquinate dehydratase" + ], + "id": "CDS_1682", + "location": [ + [ + "NC_000913", + 1774686, + "+", + 759 + ] + ], + "md5": "84571b8374eef90b8d96472692920f2f", + "parent_gene": "", + "protein_md5": "2430db0e67ee8cbbeb6c0d725090a453", + "protein_translation": "MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005656" + ], + [ + "gene_synonym", + "ECK1692" + ], + [ + "gene_synonym", + "EcoGene:EG12432" + ], + [ + "gene_synonym", + "GI:16129650" + ], + [ + "gene_synonym", + "GeneID:946211" + ], + [ + "gene_synonym", + "JW1684" + ], + [ + "gene_synonym", + "NP_416209.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37766" + ], + [ + "gene_synonym", + "b1694" + ], + [ + "gene_synonym", + "ydiF" + ] + ], + "dna_sequence": "ATGAAACCTGTAAAACCACCTCGTATTAATGGACGAGTGCCGGTCCTGTCGGCACAGGAAGCGGTGAATTATATTCCCGACGAAGCAACACTTTGTGTGTTAGGCGCTGGCGGCGGTATTCTGGAAGCCACCACGTTAATTACTGCTCTTGCTGATAAATATAAACAGACTCAAACACCACGTAATTTATCGATTATTAGTCCAACAGGGCTTGGCGATCGCGCCGACCGTGGTATTAGTCCTCTGGCGCAAGAAGGTCTGGTGAAATGGGCATTATGTGGTCACTGGGGACAATCGCCGCGTATTTCTGAACTCGCAGAACAAAATAAAATTATTGCTTATAACTACCCACAAGGTGTACTTACACAAACCTTACGCGCCGCCGCAGCCCACCAGCCTGGTATTATTAGTGATATTGGCATCGGGACATTTGTCGATCCACGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTACGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTCCGTATTCCGGGTTATCTGGTGGATATTGTGGTGGTCGATCCGGATCAAACCCAACTGTATGGCGGTGCACCGGTTAACCGCTTTATTTCTGGTGACTTCACCCTTGATGACAGTACCAAACTTAGCCTGCCCCTAAACCAACGTAAATTAGTTGCGCGGCGCGCATTATTCGAAATGCGTAAAGGCGCGGTGGGGAATGTCGGCGTCGGTATTGCTGACGGCATTGGCCTGGTCGCCCGAGAAGAAGGTTGTGCTGATGACTTTATTCTGACGGTAGAAACAGGTCCGATTGGCGGAATTACTTCACAGGGGATCGCCTTTGGCGCGAACGTGAATACCCGTGCCATTCTGGATATGACGTCCCAGTTTGATTTTTATCACGGTGGCGGTCTGGATGTTTGTTATTTGAGTTTTGCTGAAGTCGACCAGCACGGTAACGTCGGCGTGCATAAATTCAATGGTAAAATCATGGGCACCGGTGGATTTATTGATATCAGTGCCACTTCGAAGAAAATCATTTTCTGCGGCACATTAACTGCGGGCAGTTTAAAAACAGAAATTACCGACGGCAAATTAAATATCGTCCAGGAAGGACGGGTGAAGAAATTTATTCGGGAACTACCGGAAATTACTTTCAGCGGAAAAATCGCTCTCGAGCGAGGGCTGGATGTTCGTTATATCACTGAGCGCGCAGTATTCACGCTGAAAGAAGACGGCCTGCATTTAATCGAAATCGCCCCTGGCGTCGATTTACAAAAAGATATTCTCGACAAAATGGATTTCACCCCAGTGATTTCGCCAGAACTCAAACTGATGGACGAAAGATTATTTATCGATGCGGCGATGGGTTTTGTCCTGCCTGAAGCGGCTCATTAA", + "dna_sequence_length": 1596, + "functions": [ + "putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit" + ], + "id": "CDS_1683", + "location": [ + [ + "NC_000913", + 1775587, + "+", + 1596 + ] + ], + "md5": "2e84e07dce34f9b13f489126b94fa986", + "parent_gene": "", + "protein_md5": "555fcc3bb0c13a8b15dff7efdb719a87", + "protein_translation": "MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRISELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKEDLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQTQLYGGAPVNRFISGDFTLDDSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVETGPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKFNGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEITDGKLNIVQEGRVKKFIRELPEITFSGKIALERGLDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPELKLMDERLFIDAAMGFVLPEAAH", + "protein_translation_length": 531, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005658" + ], + [ + "gene_synonym", + "ECK1693" + ], + [ + "gene_synonym", + "EcoGene:EG13974" + ], + [ + "gene_synonym", + "GI:90111318" + ], + [ + "gene_synonym", + "GeneID:945626" + ], + [ + "gene_synonym", + "JW5275" + ], + [ + "gene_synonym", + "NP_416210.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9U8" + ], + [ + "gene_synonym", + "b1695" + ], + [ + "gene_synonym", + "ydiO" + ] + ], + "dna_sequence": "ATGGATTTTTCTTTAACTGAAGAACAAGAACTGCTGCTGGCCAGTATTCGCGAACTGATTACGACTAACTTTCCGGAAGAGTATTTCCGCACCTGCGATCAAAACGGGACATATCCGCGTGAGTTTATGCGGGCGCTGGCGGATAACGGTATTTCCATGCTTGGCGTGCCGGAAGAATTTGGTGGTATCCCTGCGGATTACGTCACCCAAATGCTGGCGCTGATGGAAGTGTCAAAATGCGGTGCTCCGGCATTTTTAATTACCAACGGTCAATGTATTCACAGTATGCGCCGTTTCGGTTCTGCAGAGCAGCTACGTAAAACGGCAGAGAGCACCCTGGAAACGGGTGATCCCGCCTATGCCCTGGCGTTGACGGAACCAGGTGCTGGCTCAGATAACAACAGTGCCACTACCACTTACACGCGTAAAAACGGCAAGGTCTACATCAACGGACAAAAAACCTTTATTACCGGTGCGAAAGAGTACCCGTATATGCTGGTGCTGGCGCGCGATCCGCAACCGAAAGATCCCAAAAAAGCCTTCACCCTGTGGTGGGTCGACTCCAGTAAGCCCGGCATTAAGATTAACCCGCTGCATAAAATCGGCTGGCATATGCTCAGCACCTGCGAAGTCTATCTCGACAACGTGGAGGTTGAAGAGAGCGACATGGTGGGCGAAGAAGGAATGGGTTTCCTCAATGTGATGTACAACTTTGAGATGGAGCGCCTGATCAACGCCGCGCGCAGCACCGGCTTTGCCGAATGCGCCTTTGAAGATGCCGCCCGCTATGCCAACCAACGTATCGCTTTTGGTAAGCCCATTGGTCATAACCAGATGATCCAGGAAAAACTGGCGCTGATGGCGATTAAGATCGACAACATGCGCAACATGGTGCTGAAAGTGGCATGGCAAGCCGATCAGCATCAGTCACTGCGCACCAGCGCGGCGCTGGCAAAACTGTACTGTGCACGTACCGCAATGGAAGTCATTGATGATGCGATTCAAATCATGGGCGGTCTGGGCTATACCGATGAGGCGCGCGTCTCCCGCTTCTGGCGTGATGTCCGTTGTGAACGTATCGGCGGCGGTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAA", + "dna_sequence_length": 1152, + "functions": [ + "putative acyl-CoA dehydrogenase" + ], + "id": "CDS_1684", + "location": [ + [ + "NC_000913", + 1777196, + "+", + 1152 + ] + ], + "md5": "2076bfc11f3d1ce976a436a404d3edf4", + "parent_gene": "", + "protein_md5": "f4fbd7821c38d46764fc40e1be629d2d", + "protein_translation": "MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005660" + ], + [ + "gene_synonym", + "ECK1694" + ], + [ + "gene_synonym", + "EcoGene:EG13975" + ], + [ + "gene_synonym", + "GI:16129652" + ], + [ + "gene_synonym", + "GeneID:945095" + ], + [ + "gene_synonym", + "JW1686" + ], + [ + "gene_synonym", + "NP_416211.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77402" + ], + [ + "gene_synonym", + "b1696" + ], + [ + "gene_synonym", + "ydiP" + ] + ], + "dna_sequence": "ATGTATCAACGCTGTTTTGATAACGCCAGTGAAACGCTGTTTGTCGCCGGTAAAACGCCACGGCTTTCACGTTTTGCATTTAGCGATGATCCAAAATGGGAGTCCGGACATCACGTTCATGACAATGAAACCGAGTTGATTTACGTCAAGAAAGGGGTTGCAAGGTTTACCATCGATTCTTCGTTATATGTCGCACATGCGGATGACATTGTGGTGATAGAACGCGGCAGGCTGCATGCGGTGGCCTCTGACGTTAACGATCCGGCAACGACGTGTACCTGTGCGCTGTACGGCTTTCAGTTTCAGGGGGCTGAGGAAAATCAGCTACTGCAACCGCATTCTTGTCCGGTAATTGCCGCGGGGCAGGGAAAAGAAGTCATAAAAACCTTATTTAATGAGCTAAGTGTGATTTTGCCGCAAAGTAAAAATAGCCAAACATCTTCGTTATGGGATGCATTTGCCTATACGTTAGCCATTCTTTACTACGAAAATTTTAAAAATGCTTATCGTTCGGAGCAGGGGTATATTAAAAAAGATGTTCTGATAAAAGATATTCTTTTCTATCTGAATAATAATTATCGCGAAAAAATCACTTTAGAACAGTTATCGAAAAAATTTCGTGCCAGCGTCAGTTATATTTGCCATGAATTTACCAAAGAGTATCGTATTTCCCCTATTAACTATGTTATTCAACGGCGTATGACGGAAGCAAAATGGTCACTCACTAATACTGAATTATCACAGGCAGAGATCTCCTGGCGTGTGGGTTATGAAAATGTCGATCACTTTGCCAAACTGTTTTTGCGCCATGTCGGTTGTTCGCCCAGCGATTACCGTAGACAATTTAAAAACTGTTTTGCGGAACAAGAAATCCTATCTGAATTTCCTCAACCGGTAAGTCTTGTTGGATAA", + "dna_sequence_length": 912, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1685", + "location": [ + [ + "NC_000913", + 1779301, + "-", + 912 + ] + ], + "md5": "ffdf30cd111d8064d665de3e49e3fbab", + "parent_gene": "", + "protein_md5": "eeb10359211ecbd77c0faa15f78e866c", + "protein_translation": "MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVSLVG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005666" + ], + [ + "gene_synonym", + "ECK1695" + ], + [ + "gene_synonym", + "EcoGene:EG13976" + ], + [ + "gene_synonym", + "GI:16129653" + ], + [ + "gene_synonym", + "GeneID:946482" + ], + [ + "gene_synonym", + "JW5276" + ], + [ + "gene_synonym", + "NP_416212.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76201" + ], + [ + "gene_synonym", + "b1697" + ], + [ + "gene_synonym", + "ydiQ" + ] + ], + "dna_sequence": "ATGAAAATAATAACCTGCTTTAAGCTGGTGCCTGAAGAACAGGACATTGTTGTCACTCCAGAATACACCCTGAATTTCGACAATGCCGACGCCAAAATCAGCCAGTTCGATCTCAATGCCATTGAAGCTGCAAGCCAGCTCGCAACAGATGACGATGAGATAGCCGCGCTGACCGTTGGCGGCTCATTGTTGCAGAACTCGAAAGTGCGCAAAGACGTGCTATCCCGCGGGCCGCACAGCCTGTATTTGGTGCAGGATGCGCAACTTGAACATGCACTGCCTCTCGATACCGCAAAAGCGCTGGCGGCAGCAATTGAAAAGATCGGCTTCGATTTACTGATCTTTGGTGAAGGTTCCGGCGACCTTTATGCCCAGCAGGTTGGCTTGCTGGTCGGAGAAATTCTGCAACTTCCGGTGATTAATGCAGTGAGTGCTATTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGA", + "dna_sequence_length": 765, + "functions": [ + "putative electron transfer flavoprotein subunit" + ], + "id": "CDS_1686", + "location": [ + [ + "NC_000913", + 1779617, + "+", + 765 + ] + ], + "md5": "b0bd876e0a350a1348abfcae1c1816a1", + "parent_gene": "", + "protein_md5": "76d7ec9a071eed255b8864d1b7ede0c3", + "protein_translation": "MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005668" + ], + [ + "gene_synonym", + "ECK1696" + ], + [ + "gene_synonym", + "EcoGene:EG13977" + ], + [ + "gene_synonym", + "GI:16129654" + ], + [ + "gene_synonym", + "GeneID:945688" + ], + [ + "gene_synonym", + "JW1688" + ], + [ + "gene_synonym", + "NP_416213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77378" + ], + [ + "gene_synonym", + "b1698" + ], + [ + "gene_synonym", + "ydiR" + ] + ], + "dna_sequence": "ATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAGCATTGCTGCCCTGCTGAAAGATAAACACCCCGCTATGTTGCTGTTGGCCGCGACGAAACGTGGTAAAGCGCTGGCAGCACGGTTAAGTGTGCAACTGAATGCGGCGCTGGTGAACGATGCCACGGCGGTGGATATTGTCGATGGTCACATTTGCGCCGAACACCGGATGTATGGCGGGTTAGCGTTCGCTCAGGAAAAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGATGGAGCGTGAACGTTATATCGGTGTCTCCGGCGTGTTGCTGAAATCCGATCTCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCGACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAA", + "dna_sequence_length": 939, + "functions": [ + "putative electron transfer flavoprotein, FAD-binding subunit" + ], + "id": "CDS_1687", + "location": [ + [ + "NC_000913", + 1780401, + "+", + 939 + ] + ], + "md5": "51e7705d896d4b6bdd2959b9547895a4", + "parent_gene": "", + "protein_md5": "c2a577597e15da77d3527807221f5bf5", + "protein_translation": "MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCLYVLAQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005671" + ], + [ + "gene_synonym", + "ECK1697" + ], + [ + "gene_synonym", + "EcoGene:EG13978" + ], + [ + "gene_synonym", + "GI:16129655" + ], + [ + "gene_synonym", + "GeneID:946212" + ], + [ + "gene_synonym", + "JW1689" + ], + [ + "gene_synonym", + "NP_416214.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77337" + ], + [ + "gene_synonym", + "b1699" + ], + [ + "gene_synonym", + "ydiS" + ] + ], + "dna_sequence": "ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACACACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTAACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAGCCAGATGTTCCGCAACACGCATCTTATACCGTATTGCGTAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGACGCGCTGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGATGGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGAGGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCGGTTCCCCTTCTGACGGCCTGATGGGCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGATTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCTGATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTAACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCCATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTGGCGCAATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAACCCGCGCCTGTTTAGCCAATACCCACGAATGGTAGCCGACATCATGAACGAGATGTTCACCATCGACGGCAAACCAAACCAGCCGGTACGAAAAATGATCATGGGACATGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAACCGCGCTATGA", + "dna_sequence_length": 1290, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1688", + "location": [ + [ + "NC_000913", + 1781395, + "+", + 1290 + ] + ], + "md5": "df670b9b83a40c35d57fe68b28fdd467", + "parent_gene": "", + "protein_md5": "46bf11d88c09549eeb465a498abb02b9", + "protein_translation": "MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005674" + ], + [ + "gene_synonym", + "ECK1698" + ], + [ + "gene_synonym", + "EcoGene:EG13979" + ], + [ + "gene_synonym", + "GI:16129656" + ], + [ + "gene_synonym", + "GeneID:946214" + ], + [ + "gene_synonym", + "JW1690" + ], + [ + "gene_synonym", + "NP_416215.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77714" + ], + [ + "gene_synonym", + "b1700" + ], + [ + "gene_synonym", + "ydiT" + ] + ], + "dna_sequence": "ATGAGCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATTCTGGCGGAAAATCCCGATATCAATGAATTCCATAAATTAATGAAAGCCTGCCCTGCCGGACTTTATAAGCAGGATGACGCAGGAAACATTCATTTTGATTCCGCCGGTTGTCTGGAGTGCGGCACCTGTCGGGTGCTGTGCGGTAACACTATTCTCGAACAGTGGCAATATCCCGCAGGCACCTTCGGTATTGATTTTCGCTACGGCTAA", + "dna_sequence_length": 294, + "functions": [ + "putative 3Fe-4S ferredoxin-type protein" + ], + "id": "CDS_1689", + "location": [ + [ + "NC_000913", + 1782681, + "+", + 294 + ] + ], + "md5": "f5d538a0813e00b2c58c633e7cd15932", + "parent_gene": "", + "protein_md5": "41572006de550b3469e04933f37ec499", + "protein_translation": "MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKACPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005676" + ], + [ + "gene_synonym", + "ECK1699" + ], + [ + "gene_synonym", + "EcoGene:EG12357" + ], + [ + "gene_synonym", + "GI:145698273" + ], + [ + "gene_synonym", + "GeneID:946213" + ], + [ + "gene_synonym", + "JW5910" + ], + [ + "gene_synonym", + "NP_416216.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38135" + ], + [ + "gene_synonym", + "b1701" + ], + [ + "gene_synonym", + "fadK" + ], + [ + "gene_synonym", + "ydiD" + ] + ], + "dna_sequence": "ATGAAAGTGACATTAACGTTTAACGAACAACGTCGTGCGGCGTATCGTCAGCAAGGGTTATGGGGCGATGCTTCGCTGGCCGATTACTGGCAGCAGACCGCTCGTGCGATGCCAGACAAAATTGCCGTGGTCGATAATCATGGTGCATCGTACACCTATAGCGCGCTCGATCACGCCGCGAGCTGTCTGGCAAACTGGATGTTAGCGAAGGGTATTGAATCAGGCGATCGCATCGCATTTCAACTGCCTGGCTGGTGTGAATTTACCGTTATCTATCTTGCCTGCCTGAAAATCGGTGCAGTTTCCGTGCCGCTGTTGCCTTCCTGGCGGGAAGCAGAACTGGTGTGGGTGCTCAATAAGTGTCAGGCAAAAATGTTCTTTGCACCGACGTTGTTTAAACAAACGCGTCCGGTAGATTTAATCCTGCCGCTGCAAAATCAGCTTCCACAACTACAACAAATTGTCGGCGTGGACAAACTGGCTCCCGCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATACCTCACTGACCACGGCGATAACGACCCACGGCGATGAATTAGCTGCGGTGCTGTTTACCTCCGGAACCGAGGGTCTGCCAAAGGGCGTGATGCTAACGCATAACAATATTCTCGCCAGTGAGCGGGCTTATTGCGCGCGACTGAATCTGACCTGGCAGGATGTCTTTATGATGCCTGCGCCACTTGGTCACGCAACGGGCTTTCTGCATGGCGTAACGGCACCATTCTTAATTGGCGCTCGCAGCGTGTTGTTAGATATTTTCACTCCTGATGCGTGTCTCGCGCTGCTTGAGCAGCAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTTTCTTTCTTTGCGGCGGAACCACAATCCCCAAAAAAGTGGCGCGTGAATGCCAGCAGCGCGGCATTAAATTATTAAGTGTTTATGGTTCCACAGAAAGTTCGCCGCATGCGGTGGTGAATCTCGATGATCCTTTGTCGCGCTTTATGCACACCGATGGTTACGCTGCCGCAGGTGTAGAGATTAAAGTGGTCGATGACGCACGCAAGACCTTACCGCCAGGTTGCGAAGGTGAAGAAGCCTCGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCGTGAAGTGGAAGATATTTTATTGCAGCATCCTAAAATTCACGATGCCTGTGTGGTTGCAATGTCCGATGAACGTTTAGGTGAACGATCATGCGCTTATGTCGTGCTGAAAGCGCCGCATCATTCATTATCGCTGGAAGAGGTAGTGGCTTTTTTTAGCCGTAAACGGGTCGCAAAATATAAATATCCTGAACATATCGTGGTAATCGAAAAACTACCGCGAACTACCTCAGGTAAAATACAAAAGTTTTTGTTAAGAAAAGATATTATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAA", + "dna_sequence_length": 1647, + "functions": [ + "short chain acyl-CoA synthetase, anaerobic" + ], + "id": "CDS_1690", + "location": [ + [ + "NC_000913", + 1783031, + "+", + 1647 + ] + ], + "md5": "9b0025865c3f89bf937e831f2a90c2eb", + "parent_gene": "", + "protein_md5": "b934c01baf11e5405e05925f65e6dc4d", + "protein_translation": "MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRKDIMRRLTQDVCEEIE", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005678" + ], + [ + "gene_synonym", + "ECK1700" + ], + [ + "gene_synonym", + "EcoGene:EG10759" + ], + [ + "gene_synonym", + "GI:16129658" + ], + [ + "gene_synonym", + "GeneID:946209" + ], + [ + "gene_synonym", + "JW1692" + ], + [ + "gene_synonym", + "NP_416217.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23538" + ], + [ + "gene_synonym", + "b1702" + ], + [ + "gene_synonym", + "pps" + ], + [ + "gene_synonym", + "ppsA" + ] + ], + "dna_sequence": "ATGTCCAACAATGGCTCGTCACCGCTGGTGCTTTGGTATAACCAACTCGGCATGAATGATGTAGACAGGGTTGGGGGCAAAAATGCCTCCCTGGGTGAAATGATTACTAATCTTTCCGGAATGGGTGTTTCCGTTCCGAATGGTTTCGCCACAACCGCCGACGCGTTTAACCAGTTTCTGGACCAAAGCGGCGTAAACCAGCGCATTTATGAACTGCTGGATAAAACGGATATTGACGATGTTACTCAGCTTGCGAAAGCGGGCGCGCAAATCCGCCAGTGGATTATCGACACTCCCTTCCAGCCTGAGCTGGAAAACGCCATCCGCGAAGCCTATGCACAGCTTTCCGCCGATGACGAAAACGCCTCTTTTGCGGTGCGCTCCTCCGCCACCGCAGAAGATATGCCGGACGCTTCTTTTGCCGGTCAGCAGGAAACCTTCCTCAACGTTCAGGGTTTTGACGCCGTTCTCGTGGCAGTGAAACATGTATTTGCTTCTCTGTTTAACGATCGCGCCATCTCTTATCGTGTGCACCAGGGTTACGATCACCGTGGTGTGGCGCTCTCCGCCGGTGTTCAACGGATGGTGCGCTCTGACCTCGCATCATCTGGCGTGATGTTCTCCATTGATACCGAATCCGGCTTTGACCAGGTGGTGTTTATCACTTCCGCATGGGGCCTTGGTGAGATGGTCGTGCAGGGTGCGGTTAACCCGGATGAGTTTTACGTGCATAAACCGACACTGGCGGCGAATCGCCCGGCTATCGTGCGCCGCACCATGGGGTCGAAAAAAATCCGCATGGTTTACGCGCCGACCCAGGAGCACGGCAAGCAGGTTAAAATCGAAGACGTACCGCAGGAACAGCGTGACATCTTCTCGCTGACCAACGAAGAAGTGCAGGAACTGGCAAAACAGGCCGTACAAATTGAGAAACACTACGGTCGCCCGATGGATATTGAGTGGGCGAAAGATGGCCACACCGGTAAACTGTTCATTGTGCAGGCGCGTCCGGAAACCGTGCGCTCACGCGGTCAGGTCATGGAGCGTTATACGCTGCATTCACAGGGTAAGATTATCGCCGAAGGCCGTGCTATCGGTCATCGCATCGGTGCGGGTCCGGTGAAAGTCATCCATGACATCAGCGAAATGAACCGCATCGAACCTGGCGACGTGCTGGTTACTGACATGACCGACCCGGACTGGGAACCGATCATGAAGAAAGCATCTGCCATCGTCACCAACCGTGGCGGTCGTACCTGTCACGCGGCGATCATCGCTCGTGAACTGGGCATTCCGGCGGTAGTGGGCTGTGGAGATGCAACAGAACGGATGAAAGACGGTGAGAACGTCACTGTTTCTTGTGCCGAAGGTGATACCGGTTACGTCTATGCGGAGTTGCTGGAATTTAGCGTGAAAAGCTCCAGCGTAGAAACGATGCCGGATCTGCCGTTGAAAGTGATGATGAACGTCGGTAACCCGGACCGTGCTTTCGACTTCGCCTGCCTACCGAACGAAGGCGTGGGCCTTGCGCGTCTGGAATTTATCATCAACCGTATGATTGGCGTCCACCCACGCGCACTGCTTGAGTTTGACGATCAGGAACCGCAGTTGCAAAACGAAATCCGCGAGATGATGAAAGGTTTTGATTCTCCGCGTGAATTTTACGTTGGTCGTCTGACTGAAGGGATCGCGACGCTGGGTGCCGCGTTTTATCCGAAGCGCGTCATTGTCCGTCTCTCTGATTTTAAATCGAACGAATATGCCAACCTGGTCGGTGGTGAGCGTTACGAGCCAGATGAAGAGAACCCGATGCTCGGCTTCCGTGGCGCGGGCCGCTATGTTTCCGACAGCTTCCGCGACTGTTTCGCGCTGGAGTGTGAAGCAGTGAAACGTGTGCGCAACGACATGGGACTGACCAACGTTGAGATCATGATCCCGTTCGTGCGTACCGTAGATCAGGCGAAAGCGGTGGTTGAAGAACTGGCGCGTCAGGGGCTGAAACGTGGCGAGAACGGGCTGAAAATCATCATGATGTGTGAAATCCCGTCCAACGCCTTGCTGGCCGAGCAGTTCCTCGAATATTTCGACGGCTTCTCAATTGGCTCAAACGATATGACGCAGCTGGCGCTCGGTCTGGACCGTGACTCCGGCGTGGTGTCTGAATTGTTCGATGAGCGCAACGATGCGGTGAAAGCACTGCTGTCGATGGCTATCCGTGCCGCGAAGAAACAGGGCAAATATGTCGGGATTTGCGGTCAGGGTCCGTCCGACCACGAAGACTTTGCCGCATGGTTGATGGAAGAGGGGATCGATAGCCTGTCTCTGAACCCGGACACCGTGGTGCAAACCTGGTTAAGCCTGGCTGAACTGAAGAAATAA", + "dna_sequence_length": 2379, + "functions": [ + "phosphoenolpyruvate synthase" + ], + "id": "CDS_1691", + "location": [ + [ + "NC_000913", + 1787112, + "-", + 2379 + ] + ], + "md5": "4a02ef73d8be1337536ba783acb21ee6", + "parent_gene": "", + "protein_md5": "8d98038c6dec8415d1e126fe011fc089", + "protein_translation": "MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK", + "protein_translation_length": 792, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005682" + ], + [ + "gene_synonym", + "ECK1701" + ], + [ + "gene_synonym", + "EcoGene:EG11132" + ], + [ + "gene_synonym", + "GI:16129659" + ], + [ + "gene_synonym", + "GeneID:946207" + ], + [ + "gene_synonym", + "JW1693" + ], + [ + "gene_synonym", + "NP_416218.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A4" + ], + [ + "gene_synonym", + "b1703" + ], + [ + "gene_synonym", + "duf299" + ], + [ + "gene_synonym", + "ppsR" + ], + [ + "gene_synonym", + "ydiA" + ] + ], + "dna_sequence": "ATGGATAATGCTGTTGATCGCCACGTTTTTTATATTTCTGATGGTACGGCAATAACTGCGGAGGTATTAGGACACGCAGTAATGTCACAATTTCCCGTCACTATCAGCAGCATCACGCTGCCGTTTGTCGAAAATGAGAGCCGTGCACGGGCAGTGAAGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCTGGTCTTCTACTCCATCGTGTTGCCGGAGATTCGCGCCATCATCTTGCAAAGTGAAGGCTTTTGCCAGGATATCGTTCAGGCGCTGGTTGCCCCGCTACAACAAGAGATGAAACTGGATCCAACGCCGATTGCTCATCGTACCCATGGCCTTAACCCTAATAATCTCAATAAATATGATGCGCGCATTGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGGAACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTCGCCGAATGTACTAG", + "dna_sequence_length": 834, + "functions": [ + "PEP synthase kinase and PEP synthase pyrophosphorylase" + ], + "id": "CDS_1692", + "location": [ + [ + "NC_000913", + 1787445, + "+", + 834 + ] + ], + "md5": "2842c2b9af85aba08284ac44354d8d88", + "parent_gene": "", + "protein_md5": "06fae8bc6a882323282c58129bdf9b9e", + "protein_translation": "MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005686" + ], + [ + "gene_synonym", + "ECK1702" + ], + [ + "gene_synonym", + "EcoGene:EG10080" + ], + [ + "gene_synonym", + "GI:16129660" + ], + [ + "gene_synonym", + "GeneID:946229" + ], + [ + "gene_synonym", + "JW1694" + ], + [ + "gene_synonym", + "NP_416219.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00887" + ], + [ + "gene_synonym", + "aroH" + ], + [ + "gene_synonym", + "b1704" + ] + ], + "dna_sequence": "ATGAACAGAACTGACGAACTCCGTACTGCGCGTATTGAGAGCCTGGTAACGCCCGCCGAACTCGCGCTACGGTATCCCGTAACGCCTGGCGTCGCCACCCATGTCACCGACTCCCGCCGCAGAATTGAAAAAATACTGAATGGTGAAGATAAGCGACTGTTGGTCATTATTGGCCCCTGCTCGATCCACGATCTCACCGCTGCAATGGAGTACGCCACCCGTCTGCAGTCGCTGCGCAACCAGTACCAGTCACGGCTGGAAATCGTAATGCGCACCTATTTTGAAAAACCACGAACTGTTGTCGGCTGGAAAGGACTAATCTCCGATCCAGATTTAAACGGCAGCTATCGGGTAAATCACGGTCTGGAGCTGGCGCGCAAATTACTTTTACAGGTAAATGAGCTGGGCGTCCCAACCGCGACCGAGTTCCTCGATATGGTGACCGGTCAGTTTATTGCTGATTTAATCAGTTGGGGCGCGATTGGCGCACGTACTACCGAAAGTCAGATCCACCGCGAAATGGCTTCGGCACTCTCCTGTCCGGTAGGTTTTAAAAATGGTACCGATGGCAATACGCGGATTGCTGTGGATGCTATCCGCGCAGCCCGCGCCAGCCATATGTTCCTCTCGCCAGACAAAAATGGTCAGATGACCATCTATCAGACCAGCGGCAACCCGTATGGCCACATTATTATGCGTGGCGGCAAAAAACCGAATTATCATGCCGATGATATCGCCGCAGCCTGCGATACGCTGCACGAGTTTGATTTACCTGAACATCTGGTGGTGGATTTCAGCCACGGTAACTGCCAGAAGCAGCACCGTCGCCAGTTAGAAGTTTGTGAGGATATTTGTCAGCAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCTGA", + "dna_sequence_length": 1047, + "functions": [ + "3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible" + ], + "id": "CDS_1693", + "location": [ + [ + "NC_000913", + 1788435, + "+", + 1047 + ] + ], + "md5": "38bc7f6ec3f719553b36af477f71b01c", + "parent_gene": "", + "protein_md5": "166e04931ad678bcd8588b541710f9c1", + "protein_translation": "MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEKILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTERLVEKLASAVDTRF", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005692" + ], + [ + "gene_synonym", + "ECK1703" + ], + [ + "gene_synonym", + "EcoGene:EG12391" + ], + [ + "gene_synonym", + "GI:16129661" + ], + [ + "gene_synonym", + "GeneID:946205" + ], + [ + "gene_synonym", + "JW1695" + ], + [ + "gene_synonym", + "NP_416220.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX9" + ], + [ + "gene_synonym", + "b1705" + ], + [ + "gene_synonym", + "ydiE" + ] + ], + "dna_sequence": "ATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAATCACAAGACCGCTTCCCCGCAGCCTATTCGGCGAATTTCCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATGACGGGCAAGAATATCTGCTCCGTAAAACTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG", + "dna_sequence_length": 192, + "functions": [ + "hemin uptake protein HemP homolog" + ], + "id": "CDS_1694", + "location": [ + [ + "NC_000913", + 1789613, + "+", + 192 + ] + ], + "md5": "d8e12559c6ee29ff7e7bb20863e73050", + "parent_gene": "", + "protein_md5": "2aa1c4c849cfdcc5e424b888b95747ca", + "protein_translation": "MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005694" + ], + [ + "gene_synonym", + "ECK1704" + ], + [ + "gene_synonym", + "EcoGene:EG13980" + ], + [ + "gene_synonym", + "GI:16129662" + ], + [ + "gene_synonym", + "GeneID:946219" + ], + [ + "gene_synonym", + "JW1696" + ], + [ + "gene_synonym", + "NP_416221.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77649" + ], + [ + "gene_synonym", + "b1706" + ], + [ + "gene_synonym", + "ydiU" + ] + ], + "dna_sequence": "ATGACCCTGTCTTTTGTTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAATGCCCGGCTGATTTGGCATAATACCGAACTGGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTGTCTGGGGCGGCGAAGCCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCGGGCCAACTGGGTGATGGGCGCGGCATTTTACTCGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAAAGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCAGTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAAACGGCGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTACCGCCGCGAGTCGGAAAAGGTTCGTCAGTTAGCTGACTTTGCTATTCGTCATTACTGGTCACATCTTGCAGATGATGAGGACAAATACCGTCTCTGGTTTAGCGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCTCATGGGGTGATGAATACCGACAACATGTCGCTGCTGGGGCTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGAACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTACAGCTTTGATAATCAACCTGCCGTCGCGTTGTGGAATTTACAGCGTCTGGCGCAGACATTGTCGCCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTTTTGTTGACGCATTATGGAGAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAATGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACAGCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTGCAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCCGCTCTGGTATTGCGCAACTGGTTGGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGACGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTTTCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA", + "dna_sequence_length": 1437, + "functions": [ + "UPF0061 family protein" + ], + "id": "CDS_1695", + "location": [ + [ + "NC_000913", + 1791244, + "-", + 1437 + ] + ], + "md5": "83fe5a363e801aad3921b088c78c29f3", + "parent_gene": "", + "protein_md5": "87fe9c37d27203e2cb7cd1e70ecf09b8", + "protein_translation": "MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLADDEDKYRLWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGERMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS", + "protein_translation_length": 478, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005696" + ], + [ + "gene_synonym", + "ECK1705" + ], + [ + "gene_synonym", + "EcoGene:EG13981" + ], + [ + "gene_synonym", + "GI:16129663" + ], + [ + "gene_synonym", + "GeneID:946217" + ], + [ + "gene_synonym", + "JW1697" + ], + [ + "gene_synonym", + "NP_416222.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76204" + ], + [ + "gene_synonym", + "b1707" + ], + [ + "gene_synonym", + "cdgR" + ], + [ + "gene_synonym", + "ydiV" + ] + ], + "dna_sequence": "ATGAAGATTTTTTTGGAGAATCTTTATCATTCTGATTGCTATTTCCTGCCGATAAGAGACAACCAGCAAGTCCTTGTCGGCGTTGAGTTAATTACCCATTTCTCCAGTGAAGATGGTACGGTTCGTATCCCGACGAGTCGGGTTATAGCGCAACTTACCGAGGAGCAACATTGGCAATTATTTTCAGAGCAGTTGGAATTACTAAAATCATGCCAACATTTTTTTATTCAACATAAACTCTTTGCCTGGCTTAATTTAACGCCACAAGTGGCTACATTATTATTAGAGAGGGATAATTACGCAGGCGAACTATTAAAATATCCGTTTATTGAACTGTTGATTAATGAGAATTACCCGCATCTCAATGAAGGAAAAGATAATCGCGGTCTTTTATCCTTATCGCAAGTGTATCCCCTTGTGTTAGGTAATTTGGGAGCAGGCAATAGCACAATGAAAGCGGTTTTTGATGGTCTTTTCACCCGCGTCATGCTGGATAAAAGTTTTATTCAGCAACAAATCACGCACCGCTCCTTCGAACCGTTTATTCGTGCGATCCAGGCGCAAATTTCCCCTTGTTGCAATTGCATCATTGCGGGAGGCATTGATACGGCAGAAATATTGGCACAGATTACCCCCTTCGATTTCCATGCTCTCCAGGGATGCCTGTGGCCTGCCGTTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAA", + "dna_sequence_length": 714, + "functions": [ + "anti-FlhD4C2 factor, inactive EAL family phosphodiesterase" + ], + "id": "CDS_1696", + "location": [ + [ + "NC_000913", + 1792020, + "-", + 714 + ] + ], + "md5": "0a28476b5de5063edd12ba48c7937932", + "parent_gene": "", + "protein_md5": "860d8e0cdff77015555cd50fec1428bd", + "protein_translation": "MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005704" + ], + [ + "gene_synonym", + "ECK1706" + ], + [ + "gene_synonym", + "EcoGene:EG11133" + ], + [ + "gene_synonym", + "GI:16129664" + ], + [ + "gene_synonym", + "GeneID:946220" + ], + [ + "gene_synonym", + "JW1698" + ], + [ + "gene_synonym", + "NP_416223.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23898" + ], + [ + "gene_synonym", + "b1708" + ], + [ + "gene_synonym", + "nlpC" + ] + ], + "dna_sequence": "ATGCGTTTCTGCCTTATTTTGATCACAGCACTGCTTCTGGCCGGGTGTAGCCACCATAAAGCACCGCCGCCAAATGCCAGACTTTCTGATTCGATTACCGTTATTGCCGGTTTGAACGACCAGCTACAAAGCTGGCATGGCACGCCGTATCGTTATGGTGGCATGACGCGGCGCGGTGTGGACTGTTCGGGATTTGTGGTTGTGACGATGCGCGATCGTTTCGATTTGCAGCTGCCCCGTGAAACCAAACAACAAGCCTCTATTGGCACGCAAATTGATAAAGACGAGTTGCTGCCAGGTGACCTGGTCTTTTTCAAAACGGGGTCCGGACAAAATGGTTTGCATGTAGGTATTTACGATACCAACAACCAATTTATCCACGCCTCTACCAGCAAGGGAGTGATGCGTTCCTCACTTGATAATGTCTATTGGCAGAAAAATTTCTGGCAGGCGAGACGAATCTAG", + "dna_sequence_length": 465, + "functions": [ + "putative C40 clan peptidase lipoprotein" + ], + "id": "CDS_1697", + "location": [ + [ + "NC_000913", + 1792731, + "-", + 465 + ] + ], + "md5": "f72c6344179294b1fc2950679e771f40", + "parent_gene": "", + "protein_md5": "ea4b04bdc62b56c09e81cdb9ca63bfd8", + "protein_translation": "MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005707" + ], + [ + "gene_synonym", + "ECK1707" + ], + [ + "gene_synonym", + "EcoGene:EG10128" + ], + [ + "gene_synonym", + "GI:16129665" + ], + [ + "gene_synonym", + "GeneID:945751" + ], + [ + "gene_synonym", + "JW1699" + ], + [ + "gene_synonym", + "NP_416224.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06611" + ], + [ + "gene_synonym", + "b1709" + ], + [ + "gene_synonym", + "btuD" + ] + ], + "dna_sequence": "ATGTCTATTGTGATGCAGTTACAAGATGTTGCGGAATCTACCCGCCTGGGGCCGCTTTCTGGCGAGGTTCGGGCTGGGGAGATCCTGCACCTGGTGGGGCCGAATGGCGCGGGTAAGAGTACCTTACTGGCGCGAATGGCCGGAATGACCAGCGGTAAGGGAAGCATTCAGTTCGCGGGGCAACCACTGGAAGCATGGTCCGCAACAAAACTCGCGCTGCATCGCGCCTATCTTTCACAACAGCAGACGCCGCCGTTTGCAACGCCGGTCTGGCACTACCTGACACTGCATCAGCACGATAAAACGCGTACCGAACTACTGAATGATGTCGCAGGGGCGCTGGCTCTTGATGACAAACTCGGACGTAGCACCAATCAACTTTCCGGCGGTGAATGGCAACGCGTACGTCTTGCTGCGGTGGTGTTGCAAATCACACCACAAGCCAATCCCGCAGGCCAATTGCTGCTTCTTGATGAGCCGATGAACAGTCTTGATGTTGCGCAACAAAGTGCGTTAGACAAAATTCTGAGCGCGCTGTGTCAGCAAGGACTGGCGATTGTGATGAGCAGTCACGATCTCAACCACACATTGCGTCATGCGCATCGGGCGTGGTTGCTAAAAGGTGGAAAAATGCTGGCCAGTGGACGCAGGGAAGAGGTGCTCACGCCGCCAAATCTGGCGCAGGCCTATGGGATGAATTTTCGCCGTCTGGATATCGAAGGTCACAGAATGCTGATTTCGACCATCTGA", + "dna_sequence_length": 750, + "functions": [ + "vitamin B12 ABC transporter ATPase" + ], + "id": "CDS_1698", + "location": [ + [ + "NC_000913", + 1793558, + "-", + 750 + ] + ], + "md5": "79ea7122f7f0aecb28e7fdbf4fbce74d", + "parent_gene": "", + "protein_md5": "3f891fd2fa175397656369a95e76a1a3", + "protein_translation": "MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMNFRRLDIEGHRMLISTI", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005709" + ], + [ + "gene_synonym", + "ECK1708" + ], + [ + "gene_synonym", + "EcoGene:EG10129" + ], + [ + "gene_synonym", + "GI:16129666" + ], + [ + "gene_synonym", + "GeneID:945915" + ], + [ + "gene_synonym", + "JW1700" + ], + [ + "gene_synonym", + "NP_416225.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06610" + ], + [ + "gene_synonym", + "b1710" + ], + [ + "gene_synonym", + "btuE" + ] + ], + "dna_sequence": "ATGCAAGATTCCATTCTGACGACCGTAGTGAAAGATATCGACGGTGAAGTGACCACGCTGGAGAAGTTCGCCGGTAATGTGCTGTTGATTGTCAATGTCGCCTCAAAGTGTGGCTTAACGCCGCAATATGAGCAGTTGGAGAATATTCAGAAAGCCTGGGTCGATCGAGGTTTTATGGTGCTGGGATTCCCGTGCAACCAGTTTCTGGAACAAGAACCGGGCAGCGATGAAGAGATTAAAACTTACTGTACCACCACATGGGGGGTGACGTTCCCGATGTTCAGTAAGATTGAAGTTAATGGCGAAGGACGCCATCCGCTGTATCAAAAATTGATTGCCGCAGCGCCGACCGCAGTCGCGCCGGAAGAGAGCGGATTCTATGCCCGTATGGTCAGCAAAGGCCGTGCACCGCTGTACCCGGATGATATTTTATGGAATTTTGAAAAATTCCTGGTTGGCAGGGACGGAAAAGTCATCCAGCGTTTTTCCCCGGATATGACGCCGGAAGATCCCATTGTGATGGAAAGCATTAAACTGGCGTTGGCAAAATAA", + "dna_sequence_length": 552, + "functions": [ + "glutathione peroxidase" + ], + "id": "CDS_1699", + "location": [ + [ + "NC_000913", + 1794109, + "-", + 552 + ] + ], + "md5": "f946eb974b3317450caca6f0b9d8e399", + "parent_gene": "", + "protein_md5": "41f8e0c961670fdf341351b3b1031efe", + "protein_translation": "MQDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTPQYEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQRFSPDMTPEDPIVMESIKLALAK", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005712" + ], + [ + "gene_synonym", + "ECK1709" + ], + [ + "gene_synonym", + "EcoGene:EG10127" + ], + [ + "gene_synonym", + "GI:16129667" + ], + [ + "gene_synonym", + "GeneID:945877" + ], + [ + "gene_synonym", + "JW1701" + ], + [ + "gene_synonym", + "NP_416226.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06609" + ], + [ + "gene_synonym", + "b1711" + ], + [ + "gene_synonym", + "btuC" + ] + ], + "dna_sequence": "ATGCTGACACTTGCCCGCCAACAACAGCGACAAAATATTCGCTGGTTATTATGCCTGTCAGTTTTGATGCTGCTGGCGCTTCTCTTAAGCCTTTGCGCCGGTGAACAATGGATCTCGCCAGGTGACTGGTTTACTCCTCGTGGCGAACTGTTCGTCTGGCAAATTCGCCTGCCACGTACGCTGGCTGTATTGCTGGTTGGTGCGGCGCTGGCTATATCCGGCGCTGTAATGCAGGCGTTGTTTGAAAATCCTCTGGCAGAACCTGGACTACTTGGCGTCTCTAACGGCGCAGGCGTGGGGCTTATCGCCGCGGTATTGCTTGGGCAAGGGCAACTCCCCAACTGGGCGCTAGGGCTGTGTGCGATTGCTGGCGCGCTTATCATCACTTTAATACTCTTACGTTTCGCCCGTCGTCATCTTTCGACCAGTCGGTTATTGCTGGCTGGCGTTGCATTAGGGATTATCTGTAGCGCACTAATGACGTGGGCTATCTACTTTTCCACCTCAGTTGATTTGCGTCAGCTGATGTACTGGATGATGGGCGGTTTTGGCGGCGTAGACTGGCGGCAAAGCTGGCTGATGCTGGCATTGATCCCCGTGTTGTTGTGGATCTGTTGTCAGTCCAGGCCGATGAATATGTTAGCACTTGGCGAGATCTCGGCGCGGCAACTGGGTTTACCCCTGTGGTTCTGGCGCAATGTGCTGGTGGCAGCGACCGGCTGGATGGTTGGCGTCAGTGTGGCGCTGGCGGGTGCTATCGGCTTTATTGGTCTGGTGATCCCCCATATTCTCCGGTTGTGTGGTTTAACCGATCATCGCGTATTACTTCCCGGCTGCGCGCTGGCAGGGGCGAGCGCATTGCTGCTGGCCGATATTGTAGCGCGCCTGGCATTAGCTGCCGCAGAGCTGCCTATTGGCGTGGTCACCGCAACGTTAGGTGCGCCGGTGTTTATCTGGTTATTGTTAAAAGCAGGACGTTAG", + "dna_sequence_length": 981, + "functions": [ + "vitamin B12 ABC transporter permease" + ], + "id": "CDS_1700", + "location": [ + [ + "NC_000913", + 1795152, + "-", + 981 + ] + ], + "md5": "b1167ebfe3947108bf4f0822f4a7ed43", + "parent_gene": "", + "protein_md5": "cc7473d584bb508c165ca41b53c0bea2", + "protein_translation": "MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005715" + ], + [ + "gene_synonym", + "ECK1710" + ], + [ + "gene_synonym", + "EcoGene:EG10440" + ], + [ + "gene_synonym", + "GI:16129668" + ], + [ + "gene_synonym", + "GeneID:945472" + ], + [ + "gene_synonym", + "JW1702" + ], + [ + "gene_synonym", + "NP_416227.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6X7" + ], + [ + "gene_synonym", + "b1712" + ], + [ + "gene_synonym", + "hid" + ], + [ + "gene_synonym", + "himA" + ], + [ + "gene_synonym", + "ihfA" + ] + ], + "dna_sequence": "ATGGCGCTTACAAAAGCTGAAATGTCAGAATATCTGTTTGATAAGCTTGGGCTTAGCAAGCGGGATGCCAAAGAACTGGTTGAACTGTTTTTCGAAGAGATCCGTCGCGCTCTGGAAAACGGCGAACAGGTGAAACTCTCTGGTTTTGGTAACTTCGATCTGCGTGATAAGAATCAACGCCCGGGACGTAACCCGAAAACGGGCGAGGATATTCCCATTACAGCACGGCGCGTGGTGACCTTCAGACCCGGGCAGAAGTTAAAAAGCCGGGTCGAAAACGCTTCGCCCAAAGACGAGTAA", + "dna_sequence_length": 300, + "functions": [ + "integration host factor (IHF), DNA-binding protein, alpha subunit" + ], + "id": "CDS_1701", + "location": [ + [ + "NC_000913", + 1795552, + "-", + 300 + ] + ], + "md5": "d1adbb93eaa91427c4edbe276bcec907", + "parent_gene": "", + "protein_md5": "59ec5d46b9f3ed5fc9297c10221bdeba", + "protein_translation": "MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005717" + ], + [ + "gene_synonym", + "ECK1711" + ], + [ + "gene_synonym", + "EcoGene:EG10710" + ], + [ + "gene_synonym", + "GI:16129669" + ], + [ + "gene_synonym", + "GeneID:945382" + ], + [ + "gene_synonym", + "JW1703" + ], + [ + "gene_synonym", + "NP_416228.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07395" + ], + [ + "gene_synonym", + "b1713" + ], + [ + "gene_synonym", + "pheT" + ] + ], + "dna_sequence": "ATGAAATTCAGTGAACTGTGGTTACGCGAATGGGTGAACCCGGCGATTGATAGCGATGCGCTGGCAAATCAAATCACTATGGCGGGCCTGGAAGTTGACGGTGTAGAACCGGTTGCCGGCAGCTTCCACGGCGTGGTCGTTGGTGAAGTGGTTGAGTGTGCGCAGCATCCGAACGCTGACAAACTGCGTGTGACAAAAGTGAATGTCGGCGGCGATCGCCTGCTGGACATCGTCTGCGGTGCGCCAAACTGCCGTCAGGGCCTGCGTGTAGCGGTAGCGACCATTGGTGCTGTTCTGCCGGGTGATTTCAAAATTAAAGCGGCGAAACTGCGTGGCGAACCGTCTGAAGGGATGCTGTGCTCCTTCTCTGAACTGGGCATTTCTGACGATCACAGCGGCATTATCGAACTGCCTGCGGATGCGCCGATTGGCACCGATATCCGTGAATACCTGAAACTTGATGACAACACCATCGAAATCAGCGTGACGCCAAACCGTGCCGACTGCTTAGGCATCATTGGTGTTGCGCGTGACGTTGCCGTGCTGAACCAGCTGCCGCTGGTTCAACCGGAAATCGTTCCGGTTGGTGCGACCATCGACGACACGCTGCCGATTACAGTCGAAGCGCCGGAAGCCTGCCCGCGTTATCTTGGCCGTGTGGTAAAAGGCATTAACGTTAAAGCGCCAACTCCGCTGTGGATGAAAGAAAAACTGCGTCGTTGCGGGATCCGTTCTATCGATGCAGTTGTTGACGTCACCAACTATGTGCTGCTCGAACTGGGCCAGCCGATGCACGCTTTCGATAAAGATCGCATTGAAGGCGGCATTGTGGTGCGGATGGCGAAAGAGGGCGAAACGCTGGTGCTGCTCGACGGTACTGAAGCGAAGCTGAATGCTGACACTCTGGTCATCGCCGACCACAACAAGGCGCTGGCGATGGGCGGCATCTTCGGTGGCGAACACTCTGGCGTGAATGACGAAACACAAAACGTGCTGCTGGAATGCGCGTTCTTTAGCCCGCTGTCTATCACCGGTCGTGCTCGTCGTCATGGCCTGCATACCGATGCGTCTCACCGTTATGAGCGTGGCGTTGATCCGGCACTGCAGCACAAAGCGATGGAACGTGCGACCCGTCTGCTGATCGACATCTGCGGTGGTGAGGCTGGCCCGGTAATTGATATCACCAACGAAGCAACGCTGCCGAAGCGTGCAACCATCACTCTACGTCGTAGCAAACTGGATCGCCTGATCGGCCATCATATTGCGGATGAGCAGGTAACTGACATTCTGCGTCGTCTCGGCTGCGAAGTGACCGAAGGCAAAGACGAATGGCAGGCAGTTGCGCCGAGCTGGCGTTTCGATATGGAGATTGAAGAAGATCTGGTTGAAGAAGTCGCGCGTGTTTACGGCTACAACAACATCCCGGATGAGCCGGTACAGGCAAGCCTGATTATGGGTACTCACCGTGAAGCTGACCTGTCGCTCAAGCGCGTGAAAACGCTGCTCAACGACAAAGGCTATCAGGAAGTGATCACCTACAGCTTCGTTGATCCGAAAGTGCAGCAGATGATCCATCCAGGCGTTGAAGCCTTACTGCTGCCAAGCCCGATCTCTGTTGAAATGTCAGCAATGCGTCTTTCTCTGTGGACTGGCCTGCTGGCAACCGTGGTGTACAACCAGAACCGTCAGCAGAACCGTGTGCGCATTTTCGAAAGCGGTCTGCGTTTCGTACCAGATACTCAGGCACCGTTGGGCATTCGTCAGGATCTGATGTTAGCCGGTGTGATTTGCGGTAACCGTTACGAAGAGCACTGGAACCTGGCAAAAGAGACCGTTGATTTCTATGATTTGAAAGGCGATCTTGAATCCGTTCTCGACCTGACCGGTAAACTGAATGAGGTTGAGTTCCGTGCAGAAGCGAATCCGGCACTGCATCCGGGGCAATCCGCAGCGATTTATCTGAAAGGTGAACGTATTGGTTTTGTTGGGGTTGTTCATCCTGAACTGGAACGTAAACTGGATCTTAACGGTCGCACTCTGGTGTTCGAACTGGAGTGGAACAAGCTCGCAGACCGCGTGGTGCCTCAGGCGCGCGAGATTTCTCGCTTCCCGGCGAACCGTCGTGACATCGCGGTGGTGGTCGCAGAAAACGTTCCCGCAGCGGATATTTTATCCGAATGTAAGAAAGTTGGCGTAAATCAGGTAGTTGGCGTAAACTTATTTGACGTGTACCGCGGTAAGGGTGTTGCGGAGGGGTATAAGAGCCTCGCCATAAGCCTGATCCTGCAAGATACCAGCCGTACACTCGAAGAAGAGGAGATTGCCGCTACCGTCGCCAAATGTGTAGAGGCATTAAAAGAGCGATTCCAGGCATCATTGAGGGATTGA", + "dna_sequence_length": 2388, + "functions": [ + "phenylalanine tRNA synthetase, beta subunit" + ], + "id": "CDS_1702", + "location": [ + [ + "NC_000913", + 1797944, + "-", + 2388 + ] + ], + "md5": "243baa410aa83a1e08216021a1da9474", + "parent_gene": "", + "protein_md5": "8ce280e365c9c63405943ffe355b2d58", + "protein_translation": "MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD", + "protein_translation_length": 795, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005722" + ], + [ + "gene_synonym", + "ECK1712" + ], + [ + "gene_synonym", + "EcoGene:EG10709" + ], + [ + "gene_synonym", + "GI:16129670" + ], + [ + "gene_synonym", + "GeneID:946223" + ], + [ + "gene_synonym", + "JW5277" + ], + [ + "gene_synonym", + "NP_416229.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08312" + ], + [ + "gene_synonym", + "b1714" + ], + [ + "gene_synonym", + "phe-act" + ], + [ + "gene_synonym", + "pheS" + ] + ], + "dna_sequence": "ATGTCACATCTCGCAGAACTGGTTGCCAGTGCGAAGGCGGCCATTAGCCAGGCGTCAGATGTTGCCGCGTTAGATAATGTGCGCGTCGAATATTTGGGTAAAAAAGGGCACTTAACCCTTCAGATGACGACCCTGCGTGAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGAATGCGCGTAAAGCGGAACTGGAAAGCGCTGCACTGAATGCGCGTCTGGCGGCGGAAACGATTGATGTCTCTCTGCCAGGTCGTCGCATTGAAAACGGCGGTCTGCATCCGGTTACCCGTACCATCGACCGTATCGAAAGTTTCTTCGGTGAGCTTGGCTTTACCGTGGCAACCGGGCCGGAAATCGAAGACGATTATCATAACTTCGATGCTCTGAACATTCCTGGTCACCACCCGGCGCGCGCTGACCACGACACTTTCTGGTTTGACACTACCCGCCTGCTGCGTACCCAGACCTCTGGCGTACAGATCCGCACCATGAAAGCCCAGCAGCCACCGATTCGTATCATCGCGCCTGGCCGTGTTTATCGTAACGACTACGACCAGACTCACACGCCGATGTTCCATCAGATGGAAGGTCTGATTGTTGATACCAACATCAGCTTTACCAACCTGAAAGGCACGCTGCACGACTTCCTGCGTAACTTCTTTGAGGAAGATTTGCAGATTCGCTTCCGTCCTTCCTACTTCCCGTTTACCGAACCTTCTGCAGAAGTGGACGTCATGGGTAAAAACGGTAAATGGCTGGAAGTGCTGGGCTGCGGGATGGTGCATCCGAACGTGTTGCGTAACGTTGGCATCGACCCGGAAGTTTACTCTGGTTTCGCCTTCGGGATGGGGATGGAGCGTCTGACTATGTTGCGTTACGGCGTCACCGACCTGCGTTCATTCTTCGAAAACGATCTGCGTTTCCTCAAACAGTTTAAATAA", + "dna_sequence_length": 984, + "functions": [ + "phenylalanine tRNA synthetase, alpha subunit" + ], + "id": "CDS_1703", + "location": [ + [ + "NC_000913", + 1798942, + "-", + 984 + ] + ], + "md5": "0d961e89611e223e0fc3541c37acee82", + "parent_gene": "", + "protein_md5": "2b152b67d38b3ef1e9de4703d23adf22", + "protein_translation": "MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005727" + ], + [ + "gene_synonym", + "ECK1713" + ], + [ + "gene_synonym", + "EcoGene:EG11272" + ], + [ + "gene_synonym", + "GI:16129671" + ], + [ + "gene_synonym", + "GeneID:947212" + ], + [ + "gene_synonym", + "JW1705" + ], + [ + "gene_synonym", + "NP_416230.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD74" + ], + [ + "gene_synonym", + "b1715" + ], + [ + "gene_synonym", + "pheM" + ], + [ + "gene_synonym", + "phtL" + ] + ], + "dna_sequence": "ATGAATGCTGCTATTTTCCGCTTCTTTTTTTACTTTAGCACCTGA", + "dna_sequence_length": 45, + "functions": [ + "phenylalanyl-tRNA synthetase operon leader peptide" + ], + "id": "CDS_1704", + "location": [ + [ + "NC_000913", + 1799270, + "-", + 45 + ] + ], + "md5": "9992da08571b075a1363e6e4e153c058", + "parent_gene": "", + "protein_md5": "de85ed5420901d05b232eff5c72afac7", + "protein_translation": "MNAAIFRFFFYFST", + "protein_translation_length": 14, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005729" + ], + [ + "gene_synonym", + "ECK1714" + ], + [ + "gene_synonym", + "EcoGene:EG10881" + ], + [ + "gene_synonym", + "GI:16129672" + ], + [ + "gene_synonym", + "GeneID:945152" + ], + [ + "gene_synonym", + "JW1706" + ], + [ + "gene_synonym", + "NP_416231.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7L3" + ], + [ + "gene_synonym", + "b1716" + ], + [ + "gene_synonym", + "pdzA" + ], + [ + "gene_synonym", + "rplT" + ] + ], + "dna_sequence": "ATGGCTCGCGTAAAACGTGGTGTTATTGCACGTGCACGTCACAAGAAAATTTTGAAACAAGCTAAAGGCTACTACGGTGCGCGTTCTCGCGTATACCGCGTTGCCTTCCAGGCTGTTATCAAAGCTGGTCAGTATGCTTACCGTGACCGTCGTCAACGTAAGCGTCAGTTCCGTCAACTGTGGATTGCGCGTATCAACGCAGCAGCACGTCAGAACGGTATTTCTTACAGCAAATTCATCAATGGCCTGAAAAAAGCCTCTGTTGAAATCGACCGTAAGATCCTGGCTGATATCGCAGTATTCGACAAAGTAGCGTTCACCGCTCTGGTTGAAAAAGCGAAAGCAGCTCTGGCATAA", + "dna_sequence_length": 357, + "functions": [ + "50S ribosomal subunit protein L20" + ], + "id": "CDS_1705", + "location": [ + [ + "NC_000913", + 1799749, + "-", + 357 + ] + ], + "md5": "fdf8e4c632ecafc9bc6e5172f5aae1ea", + "parent_gene": "", + "protein_md5": "fde9fa85e2bb35caa2b2d6f368888a0a", + "protein_translation": "MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005732" + ], + [ + "gene_synonym", + "ECK1715" + ], + [ + "gene_synonym", + "EcoGene:EG11231" + ], + [ + "gene_synonym", + "GI:49176137" + ], + [ + "gene_synonym", + "GeneID:946349" + ], + [ + "gene_synonym", + "JW1707" + ], + [ + "gene_synonym", + "NP_416232.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Q1" + ], + [ + "gene_synonym", + "b1717" + ], + [ + "gene_synonym", + "rpmI" + ] + ], + "dna_sequence": "ATGCCAAAAATTAAGACCGTACGCGGTGCTGCTAAGCGCTTCAAAAAAACCGGTAAAGGTGGTTTTAAGCACAAGCACGCTAACCTGCGTCACATTCTGACCAAAAAAGCGACCAAACGTAAACGTCACCTGCGTCCGAAAGCCATGGTTTCCAAAGGCGATCTGGGCCTGGTAATCGCGTGCCTGCCGTACGCATAA", + "dna_sequence_length": 198, + "functions": [ + "50S ribosomal subunit protein L35" + ], + "id": "CDS_1706", + "location": [ + [ + "NC_000913", + 1799999, + "-", + 198 + ] + ], + "md5": "d31a0afcbb4bbc7edae2958e04b5d909", + "parent_gene": "", + "protein_md5": "fe1a8a3a51c56dbf0860aac70e1d7bd7", + "protein_translation": "MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACLPYA", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005734" + ], + [ + "gene_synonym", + "ECK1716" + ], + [ + "gene_synonym", + "EcoGene:EG10506" + ], + [ + "gene_synonym", + "GI:16129674" + ], + [ + "gene_synonym", + "GeneID:946225" + ], + [ + "gene_synonym", + "JW5829" + ], + [ + "gene_synonym", + "NP_416233.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A707" + ], + [ + "gene_synonym", + "b1718" + ], + [ + "gene_synonym", + "fit" + ], + [ + "gene_synonym", + "infC" + ], + [ + "gene_synonym", + "srjA" + ] + ], + "dna_sequence": "ATTAAAGGCGGAAAACGAGTTCAAACGGCGCGCCCTAACCGTATCAATGGCGAAATTCGCGCCCAGGAAGTTCGCTTAACAGGTCTGGAAGGCGAGCAGCTTGGTATTGTGAGTCTGAGAGAAGCTCTGGAGAAAGCAGAAGAAGCCGGAGTAGACTTAGTCGAGATCAGCCCTAACGCCGAGCCGCCGGTTTGTCGTATAATGGATTACGGCAAATTCCTCTATGAAAAGAGCAAGTCTTCTAAGGAACAGAAGAAAAAGCAAAAAGTTATCCAGGTTAAGGAAATTAAATTCCGTCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAA", + "dna_sequence_length": 543, + "functions": [ + "translation initiation factor IF-3" + ], + "id": "CDS_1707", + "location": [ + [ + "NC_000913", + 1800638, + "-", + 543 + ] + ], + "md5": "0b18caac363e91acd2ef998976e4000c", + "parent_gene": "", + "protein_md5": "c96970699494faca52c721498e70a573", + "protein_translation": "MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005736" + ], + [ + "gene_synonym", + "ECK1717" + ], + [ + "gene_synonym", + "EcoGene:EG11001" + ], + [ + "gene_synonym", + "GI:16129675" + ], + [ + "gene_synonym", + "GeneID:946222" + ], + [ + "gene_synonym", + "JW1709" + ], + [ + "gene_synonym", + "NP_416234.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8M3" + ], + [ + "gene_synonym", + "b1719" + ], + [ + "gene_synonym", + "thrS" + ] + ], + "dna_sequence": "ATGCCTGTTATAACTCTTCCTGATGGCAGCCAACGCCATTACGATCACGCTGTAAGCCCCATGGATGTTGCGCTGGACATTGGTCCAGGTCTGGCGAAAGCCTGTATCGCAGGGCGCGTTAATGGCGAACTGGTTGATGCTTGCGATCTGATTGAAAACGACGCACAACTGTCGATCATTACCGCCAAAGACGAAGAAGGTCTGGAGATCATTCGTCACTCCTGTGCGCACCTGTTAGGGCACGCGATTAAACAACTTTGGCCGCATACCAAAATGGCAATCGGCCCGGTTATTGACAACGGTTTTTATTACGACGTTGATCTTGACCGCACGTTAACCCAGGAAGATGTCGAAGCACTCGAGAAGCGGATGCATGAGCTTGCTGAGAAAAACTACGACGTCATTAAGAAGAAAGTCAGCTGGCACGAAGCGCGTGAAACTTTCGCCAACCGTGGGGAGAGCTACAAAGTCTCCATTCTTGACGAAAACATCGCCCATGATGACAAGCCAGGTCTGTACTTCCATGAAGAATATGTCGATATGTGCCGCGGTCCGCACGTACCGAACATGCGTTTCTGCCATCATTTCAAACTAATGAAAACGGCAGGGGCTTACTGGCGTGGCGACAGCAACAACAAAATGTTGCAACGTATTTACGGTACGGCGTGGGCAGACAAAAAAGCACTTAACGCTTACCTGCAGCGCCTGGAAGAAGCCGCGAAACGCGACCACCGTAAAATCGGTAAACAGCTCGACCTGTACCATATGCAGGAAGAAGCGCCGGGTATGGTATTCTGGCACAACGACGGCTGGACCATCTTCCGTGAACTGGAAGTGTTTGTTCGTTCTAAACTGAAAGAGTACCAGTATCAGGAAGTTAAAGGTCCGTTCATGATGGACCGTGTCCTGTGGGAAAAAACCGGTCACTGGGACAACTACAAAGATGCAATGTTCACCACATCTTCTGAGAACCGTGAATACTGCATTAAGCCGATGAACTGCCCGGGTCACGTACAAATTTTCAACCAGGGGCTGAAGTCTTATCGCGATCTGCCGCTGCGTATGGCCGAGTTTGGTAGCTGCCACCGTAACGAGCCGTCAGGTTCGCTGCATGGCCTGATGCGCGTGCGTGGATTTACCCAGGATGACGCGCATATCTTCTGTACTGAAGAACAAATTCGCGATGAAGTTAACGGATGTATCCGTTTAGTCTATGATATGTACAGCACTTTTGGCTTCGAGAAGATCGTCGTCAAACTCTCCACTCGTCCTGAAAAACGTATTGGCAGCGACGAAATGTGGGATCGTGCTGAGGCGGACCTGGCGGTTGCGCTGGAAGAAAACAACATCCCGTTTGAATATCAACTGGGTGAAGGCGCTTTCTACGGTCCGAAAATTGAATTTACCCTGTATGACTGCCTCGATCGTGCATGGCAGTGCGGTACAGTACAGCTGGACTTCTCTTTGCCGTCTCGTCTGAGCGCTTCTTATGTAGGCGAAGACAATGAACGTAAAGTACCGGTAATGATTCACCGCGCAATTCTGGGGTCGATGGAACGTTTCATCGGTATCCTGACCGAAGAGTTCGCTGGTTTCTTCCCGACCTGGCTTGCGCCGGTTCAGGTTGTTATCATGAATATTACCGATTCACAGTCTGAATACGTTAACGAATTGACGCAAAAACTATCAAATGCGGGCATTCGTGTTAAAGCAGACTTGAGAAATGAGAAGATTGGCTTTAAAATCCGCGAGCACACTTTGCGTCGCGTCCCATATATGCTGGTCTGTGGTGATAAAGAGGTGGAATCAGGCAAAGTTGCCGTTCGCACCCGCCGTGGTAAAGACCTGGGAAGCATGGACGTAAATGAAGTGATCGAGAAGCTGCAACAAGAGATTCGCAGCCGCAGTCTTAAACAATTGGAGGAATAA", + "dna_sequence_length": 1929, + "functions": [ + "threonyl-tRNA synthetase" + ], + "id": "CDS_1708", + "location": [ + [ + "NC_000913", + 1802570, + "-", + 1929 + ] + ], + "md5": "27eb38ea59c8923f8d8184d24be446cf", + "parent_gene": "", + "protein_md5": "94d890c8500b73dc09b67543b299a8ec", + "protein_translation": "MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE", + "protein_translation_length": 642, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005740" + ], + [ + "gene_synonym", + "ASAP:ABE-0005742" + ], + [ + "gene_synonym", + "ASAP:ABE-0285095" + ], + [ + "gene_synonym", + "ECK1718" + ], + [ + "gene_synonym", + "EcoGene:EG13983" + ], + [ + "gene_synonym", + "GeneID:948935" + ], + [ + "gene_synonym", + "JW1710" + ], + [ + "gene_synonym", + "JW5278" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76205" + ], + [ + "gene_synonym", + "arpB" + ], + [ + "gene_synonym", + "b4494" + ], + [ + "gene_synonym", + "ydiW" + ], + [ + "gene_synonym", + "ydiX" + ] + ], + "dna_sequence": "ATGAGTCAAAACGATATCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGATTATATTGAACAGGAACAGTTAACTGCTGAAGATCGTAACCATTGTATGAAACTGTCTAAAAAAAAATCCATAGAGAAAAAAACTATACACCCAACAGTAAATCTCAATGGTAGTGCATGTTTTTTGCAATCTCCTTCTGACGCTATTTTTTGTCGCCATCTGTCATTGCAATACGCCCTTGATTCATTGAGAAATGGAAAAGGCAAAGTCAACCTGATTAAACATTACTCCTCCGTTGAATCCATACAGCAGCATGTCCCCTTAGTCCGGGACGCGGAGTTCAGAGCATTACTTCGCCATCCTCCTGCAGGGAGTCGCGTTATCGCGAGTAAGGATTTTGGCTTCGCTTTAGATATTTTCTTTTGTCGAATGATGGCAAACAATGTCAGTCATATGTCCGCGATTTTATATATAGACAATCATACTTTGTCAGTAAGGCTACGAATAAAGCAGTCAGTGTATGGACAATTAAATTATGTTGTGTCCGTTTACGACCCGAACGATACCAACGTTGCCGTCAGAGACACCCACAGGACAGCACGGGGCTTTCTTTCGCTTGATAAGTTCATCAGTTCAGGTCCCGATGCTCAGACCTGGGCTGATAGATATGTTCGCAACTGTGCAATTGCTATTCTGCCCCTATTACCTGTGGGAGTTCCAGGGGCTATTTTCGCGGGTATTGCATCACGAATGCCATTTGCCCCTATACATCCATCGGCAATGTTGTTAATAATGGCTACAGGCCAGTCTCAACAGCTTATTACATTATTCAAACAGTTGCCCATACTCCCTGAAAAAGAAATCATTGAAATAATAACTGCGCAGAATAGCGTTGGTACACCTGCTTTATTTTTGGCTATGATGAACGGACATACTGACAACGTGAAAATATTTATGCAAGAAATTCAGTCACTGGTAGATAATCACATCATTCATGAAGATAATCTGGTTAAATTACTGCAAACTAAAAGTGCTAACGAAACACCTGGACTTTATATCTCCATGTTGTATGGATTCGATGAAATAATCGATATCTTTCTGAATGCATTAACCACTCCAATAGCACAAGAGCTTTTAAACAAAAAACTGGTGATGAGTATTTTAGCCATGAAAATACATGATGGTGAGCCAGGATTATACGCCGCAATGGAAAATAATCACCCTTTGTGTGTCACACGGTTCCTCTCTAAAATTAATGGCATCGCCTTTAAATACAAGTTGAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATTATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCTTATATATCGACGCTGGGTGCTTTTGCAAAAAAACATTCTTTTAGTCAACATCAGTTATTTACACTATTGGCCGCTAAAAATCATGACAACATGTCAGCTGTTCATATAGCCATTCATCATAAGCATTATAAAACTGTAGAAACATATTATGCTGCTATTAATGCAATCAGCCAAAGCCTGAGTTTTAGTGCTGATGAAATAAAGACGTATTTATAA", + "dna_sequence_length": 1902, + "id": "CDS_1709", + "location": [ + [ + "NC_000913", + 1803094, + "+", + 426 + ], + [ + "NC_000913", + 1803518, + "+", + 1476 + ] + ], + "md5": "a10f487befd9f683a2bf5b14729d9cb8", + "parent_gene": "", + "protein_md5": "743e87b28539735fdcd96f72d791c53a", + "protein_translation": "MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINFATSPIHTENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKKKSIEKKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRDTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQSQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQELLNKKLVMSILAMKIHDGEPGLYAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHHKHYKTVETYYAAINAISQSLSFSADEIKTYL", + "protein_translation_length": 633, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285056" + ], + [ + "gene_synonym", + "ECK1719" + ], + [ + "gene_synonym", + "EcoGene:EG14423" + ], + [ + "gene_synonym", + "GI:145698274" + ], + [ + "gene_synonym", + "GeneID:1450269" + ], + [ + "gene_synonym", + "JW5911" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EES1" + ], + [ + "gene_synonym", + "YP_588455.2" + ], + [ + "gene_synonym", + "b4535" + ], + [ + "gene_synonym", + "yniD" + ] + ], + "dna_sequence": "ATGCCGACTAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGA", + "dna_sequence_length": 108, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1710", + "location": [ + [ + "NC_000913", + 1805165, + "+", + 108 + ] + ], + "md5": "824434fa8a786112ec92e140bdf0fa36", + "parent_gene": "", + "protein_md5": "ab82797d0aa8011eee156c8755509606", + "protein_translation": "MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005744" + ], + [ + "gene_synonym", + "ECK1720" + ], + [ + "gene_synonym", + "EcoGene:EG13984" + ], + [ + "gene_synonym", + "GI:16129676" + ], + [ + "gene_synonym", + "GeneID:946218" + ], + [ + "gene_synonym", + "JW1711" + ], + [ + "gene_synonym", + "NP_416236.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76206" + ], + [ + "gene_synonym", + "b1722" + ], + [ + "gene_synonym", + "ydiY" + ] + ], + "dna_sequence": "ATGAAGCTTTTGAAGACAGTTCCTGCCATCGTTATGTTGGCGGGGGGCATGTTTGCGTCACTGAATGCAGCTGCCGATGATTCCGTTTTTACTGTCATGGATGATCCTGCCAGCGCTAAAAAACCTTTCGAAGGTAATCTGAACGCAGGATATCTTGCACAATCAGGCAATACGAAAAGCTCCTCACTTACGGCTGACACCACCATGACCTGGTATGGACACACCACTGCCTGGTCGCTGTGGGGGAACGCCAGTAATACTTCTTCTAATGATGAGCGTTCTTCAGAAAAATATGCGGCGGGCGGGCGTAGCCGTTTTAATTTAACTGATTATGACTATTTATTTGGTCAGGCAAGCTGGCTGACAGACCGTTATAACGGCTATCGAGAGCGCGATGTGTTGACCGCGGGTTATGGTCGTCAGTTTTTGAATGGCCCGGTACACAGTTTCCGCTTTGAATTCGGTCCAGGTGTGCGTTACGACAAATATACCGACAATGCCAGTGAAACCCAGCCGCTGGGCTATGCCTCCGGGGCTTATGCATGGCAGTTGACTGACAACGCTAAATTTACGCAGGGTGTTTCGGTCTTTGGCGCGGAAGACACAACGCTGAACTCCGAAAGCGCATTAAATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGTCTGCACCGGAACATACCGACCGTCGGACAACCTTATCGCTGGGCTACAGCATGTAA", + "dna_sequence_length": 759, + "functions": [ + "acid-inducible putative outer membrane protein" + ], + "id": "CDS_1711", + "location": [ + [ + "NC_000913", + 1806083, + "-", + 759 + ] + ], + "md5": "e2dfa032e917690cea4a4c83a001f4f0", + "parent_gene": "", + "protein_md5": "84ab58669017d6a598e21ffc93cc3041", + "protein_translation": "MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGHTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005748" + ], + [ + "gene_synonym", + "ECK1721" + ], + [ + "gene_synonym", + "EcoGene:EG10700" + ], + [ + "gene_synonym", + "GI:49176138" + ], + [ + "gene_synonym", + "GeneID:946230" + ], + [ + "gene_synonym", + "JW5280" + ], + [ + "gene_synonym", + "NP_416237.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06999" + ], + [ + "gene_synonym", + "b1723" + ], + [ + "gene_synonym", + "pfkB" + ] + ], + "dna_sequence": "ATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGTGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTCCCCGTCGCTACTGTAGAAGCCAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGAAAAATTAACCCAACTGATTTCCGCTGCGCAAAAACAAGGGATCCGCTGCATCGTCGACAGTTCTGGCGAAGCGTTAAGTGCAGCACTGGCAATTGGTAACATCGAGTTGGTTAAGCCTAACCAAAAAGAACTCAGTGCGCTGGTGAATCGCGAACTCACCCAGCCGGACGATGTCCGCAAAGCCGCGCAGGAAATCGTTAATAGCGGCAAGGCCAAACGGGTTGTCGTTTCCCTGGGTCCACAAGGAGCGCTGGGTGTTGATAGTGAAAACTGTATTCAGGTGGTGCCACCACCGGTGAAAAGCCAGAGTACCGTTGGCGCTGGTGACAGCATGGTCGGCGCGATGACACTGAAACTGGCAGAAAATGCCTCTCTTGAAGAGATGGTTCGTTTTGGCGTAGCTGCGGGGAGTGCAGCCACACTCAATCAGGGAACACGTCTGTGCTCCCATGACGATACGCAAAAAATTTACGCTTACCTTTCCCGCTAA", + "dna_sequence_length": 930, + "functions": [ + "6-phosphofructokinase II" + ], + "id": "CDS_1712", + "location": [ + [ + "NC_000913", + 1806370, + "+", + 930 + ] + ], + "md5": "8f8649b47d25f7a3a36f25672e4cb4c7", + "parent_gene": "", + "protein_md5": "8bfa12521f9bb04393d8f5639d9cf074", + "protein_translation": "MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005751" + ], + [ + "gene_synonym", + "ECK1722" + ], + [ + "gene_synonym", + "EcoGene:EG13985" + ], + [ + "gene_synonym", + "GI:16129678" + ], + [ + "gene_synonym", + "GeneID:946232" + ], + [ + "gene_synonym", + "JW1713" + ], + [ + "gene_synonym", + "NP_416238.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64479" + ], + [ + "gene_synonym", + "b1724" + ], + [ + "gene_synonym", + "ydiZ" + ] + ], + "dna_sequence": "ATGGCCAGTGGCGATCTTGTCCGTTATGTCATAACCGTCATGTTGCATGAGGATACATTGACTGAAATTAACGAGTTGAATAATTACCTGACTCGCGACGGTTTTTTGCTCACTATGACGGATGATGAGGGAAATATCCATGAGCTGGGAACTAACACTTTTGGACTTATCAGTACCCAAAGTGAAGAAGAAATTAGAGAACTGGTTTCGGGGCTTACCCAAAGTGCAACCGGCAAAGATCCTGAAATCACCATCACGACCTGGGAGGAATGGAATAGCAACAGAAAATAA", + "dna_sequence_length": 291, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1713", + "location": [ + [ + "NC_000913", + 1807400, + "+", + 291 + ] + ], + "md5": "4a12a5ddf54b0bdceb17ed53beb8ed10", + "parent_gene": "", + "protein_md5": "590127badbcf03f51349813aa6afeb2f", + "protein_translation": "MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEGNIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005755" + ], + [ + "gene_synonym", + "ECK1723" + ], + [ + "gene_synonym", + "EcoGene:EG13986" + ], + [ + "gene_synonym", + "GI:16129679" + ], + [ + "gene_synonym", + "GeneID:946236" + ], + [ + "gene_synonym", + "JW1714" + ], + [ + "gene_synonym", + "NP_416239.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77739" + ], + [ + "gene_synonym", + "b1725" + ], + [ + "gene_synonym", + "yniA" + ] + ], + "dna_sequence": "ATGTGGCAGGCAATCAGTCGTCTTTTGAGCGAGCAGTTAGGTGAAGGCGAAATCGAACTGCGTAATGAACTGCCTGGCGGAGAAGTCCATGCCGCATGGCATTTGCGCTATGCAGGACATGATTTTTTCGTCAAATGTGATGAAAGGGAACTGCTTCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTATTGCTCAGCAGTCATTGGATAGATTATTAGCAGCATGA", + "dna_sequence_length": 861, + "functions": [ + "fructosamine kinase family protein" + ], + "id": "CDS_1714", + "location": [ + [ + "NC_000913", + 1807796, + "+", + 861 + ] + ], + "md5": "c1af06240a5361ed9a2c67981e72ae49", + "parent_gene": "", + "protein_md5": "5c9e9fcaf450e96d87a02972c30b517c", + "protein_translation": "MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005757" + ], + [ + "gene_synonym", + "ECK1724" + ], + [ + "gene_synonym", + "EcoGene:EG13987" + ], + [ + "gene_synonym", + "GI:16129680" + ], + [ + "gene_synonym", + "GeneID:945140" + ], + [ + "gene_synonym", + "JW1715" + ], + [ + "gene_synonym", + "NP_416240.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76208" + ], + [ + "gene_synonym", + "b1726" + ], + [ + "gene_synonym", + "yniB" + ] + ], + "dna_sequence": "ATGACGTATCAACAAGCTGGACGCATTGCTGTTTTGAAAAGGATTTTGGGTTGGGTGATTTTTATACCTGCATTGATCTCTACATTGATTTCTTTGCTGAAATTTATGAATACCCGGCAGGAAAACAAGGAAGGCATTAATGCGGTCATGCTCGACTTTACTCATGTCATGATCGATATGATGCAGGCGAATACGCCTTTTTTGAATCTATTCTGGTATAACTCCCCGACGCCCAATTTTAATGGTGGCGTGAACGTTATGTTCTGGGTGATTTTCATCCTGATTTTTGTCGGACTGGCGTTGCAGGATTCCGGTGCCCGGATGAGTCGCCAGGCGCGCTTCTTGCGGGAAGGTGTTGAAGATCAACTCATTCTGGAAAAAGCCAAAGGGGAAGAGGGGCTAACGCGTGAACAAATTGAGTCCCGTATTGTTGTTCCGCACCATACTATTTTCCTGCAGTTTTTCTCACTGTATATCCTGCCGGTTATTTGTATTGCTGCAGGTTATGTGTTCTTTTCTCTGCTTGGGTTTATTTAA", + "dna_sequence_length": 537, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_1715", + "location": [ + [ + "NC_000913", + 1809233, + "-", + 537 + ] + ], + "md5": "9b7408ef5b5c2ab8672f7e4927dff581", + "parent_gene": "", + "protein_md5": "04b4e27c4d938f28df5074160bd0f20d", + "protein_translation": "MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005761" + ], + [ + "gene_synonym", + "ECK1725" + ], + [ + "gene_synonym", + "EcoGene:EG13988" + ], + [ + "gene_synonym", + "GI:16129681" + ], + [ + "gene_synonym", + "GeneID:945632" + ], + [ + "gene_synonym", + "JW1716" + ], + [ + "gene_synonym", + "NP_416241.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77247" + ], + [ + "gene_synonym", + "b1727" + ], + [ + "gene_synonym", + "yniC" + ] + ], + "dna_sequence": "ATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATATGGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATTCGGTAAATGGCATGATCGCCTCTAAAGCAGCCCGCATGCGTTCCATCGTCGTTCCTGCGCCAGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAA", + "dna_sequence_length": 669, + "functions": [ + "2-deoxyglucose-6-P phosphatase" + ], + "id": "CDS_1716", + "location": [ + [ + "NC_000913", + 1809380, + "+", + 669 + ] + ], + "md5": "6ff5d6cb03ed5aa8edfde4b37a3a090b", + "parent_gene": "", + "protein_md5": "f7aa6c1b22de856efc1870b36b05897a", + "protein_translation": "MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005768" + ], + [ + "gene_synonym", + "ECK1726" + ], + [ + "gene_synonym", + "EcoGene:EG13989" + ], + [ + "gene_synonym", + "GI:226524720" + ], + [ + "gene_synonym", + "GeneID:945644" + ], + [ + "gene_synonym", + "JW5281" + ], + [ + "gene_synonym", + "NP_416242.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64481" + ], + [ + "gene_synonym", + "b1728" + ], + [ + "gene_synonym", + "ydjM" + ] + ], + "dna_sequence": "ATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATGGCATTATTTGTCTGGTCGGTATGGATGCCCCATTCATTACCCGAGAACAGCGCTGTTCGTTGGTCATCGCAAATGATCAATACCTTGCAGATCCAGTTTCATCGGCTTATTAAGCATCAGGTTGAATACTAA", + "dna_sequence_length": 591, + "functions": [ + "inner membrane protein regulated by LexA" + ], + "id": "CDS_1717", + "location": [ + [ + "NC_000913", + 1810211, + "+", + 591 + ] + ], + "md5": "9c78f661716b2b15246dbb8be4eeadf3", + "parent_gene": "", + "protein_md5": "7f0b657c1abe847f75166fa4410f4fbc", + "protein_translation": "MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005771" + ], + [ + "gene_synonym", + "ECK1727" + ], + [ + "gene_synonym", + "EcoGene:EG13990" + ], + [ + "gene_synonym", + "GI:16129683" + ], + [ + "gene_synonym", + "GeneID:946238" + ], + [ + "gene_synonym", + "JW1718" + ], + [ + "gene_synonym", + "NP_416243.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77529" + ], + [ + "gene_synonym", + "b1729" + ], + [ + "gene_synonym", + "ydjN" + ] + ], + "dna_sequence": "ATGAACTTTCCATTAATTGCGAACATCGTGGTGTTCGTTGTACTGCTGTTTGCGCTGGCTCAGACCCGCCATAAACAGTGGAGTCTGGCGAAAAAAGTGCTGGTGGGTCTGGTGATGGGTGTGGTTTTTGGCCTTGCCCTGCATACCATTTATGGTTCTGACAGCCAGGTACTTAAAGATTCTGTACAGTGGTTTAACATCGTTGGTAACGGCTATGTTCAACTGCTGCAAATGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGTGCATGGCATTCTGCTGGGCATTAATGGCGTGAGTCCGCTGAAGTACTTCCGTAAGGTATGGCCTGTGCTGACGTTTGCCTTTACCAGCCGTTCCAGTGCTGCGTCTATCCCACTGAATGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGCGCCGGTTTGTATCCGGCAATGCTGGCGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCGGTGTCGGTGGTGGTGCAACTTTCGCCGCACTGATTGTACTGCCTGCGATGGGCCTGCCAGTAACCCTGGTGGCGCTGTTAATCTCCGTTGAACCGCTTATCGACATGGGCCGTACGGCGTTAAACGTTAGTGGCTCGATGACAGCTGGCACGCTGACCAGCCAGTGGCTGAAGCAAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAA", + "dna_sequence_length": 1392, + "functions": [ + "putative transporter" + ], + "id": "CDS_1718", + "location": [ + [ + "NC_000913", + 1810934, + "+", + 1392 + ] + ], + "md5": "c4742ed195714012a137cd2e985ca443", + "parent_gene": "", + "protein_md5": "d591201bb48eb0d191bfafac27ba17cd", + "protein_translation": "MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH", + "protein_translation_length": 463, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005773" + ], + [ + "gene_synonym", + "ECK1728" + ], + [ + "gene_synonym", + "EcoGene:EG13991" + ], + [ + "gene_synonym", + "GI:226524721" + ], + [ + "gene_synonym", + "GeneID:946237" + ], + [ + "gene_synonym", + "JW1719" + ], + [ + "gene_synonym", + "NP_416244.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76210" + ], + [ + "gene_synonym", + "b1730" + ], + [ + "gene_synonym", + "ydjO" + ] + ], + "dna_sequence": "ATGTTTTCTACAAACTTAATACAGAGTAATTATGGTGATTTAAATATTAAAAGCCTGGCTTTCGACTCTTTTAAAGAAAGGCTGCAGTCTACTATGACAGCACTCACTTTCTTTATATCAACGGGTCAATGTGACTGCGATGAAATAGCAGAATCAAACTTTAATTATATGATTGCCTATATGTCTAACATTAACTATGATGCCTCAAAGCCAGGAGCGCCAGCACTTAGTTTTGATACATATCTGCAGGACAATGTTAAATATAGAGTAATAATTAATAATCTTTATGGTAGTGAAATTCGGATAAGAGGTATAAATAAAGATTTTATTGGAATGGATGTCACTTCTGTATTTCGCCCAGAAAAAATGACCAATTTGATCAGTATAAAAAACAGGTTGGTTATTCACTATTTAAGGACTATATACTATGAACAAAATTATATACATCCTGTCGGGAGCATTTTTGCTGCGATTCAAAAAAATGAGAGTCTCCTAAAGTTTCCTTCGATAATATCAATGCTTAATATCAATCTTCTTTTTAATCCACTAAATCTTCCGGGAATGGGAAGTGGTGTGCTTGAAGATATTATGAGTATTCCAGATAGTTCACTTAGAAAACGTCTCGGGTATGAGGTTTTAAGCTTCTCGCTACAGGCACATTCATTGAGCCAGGAATGTATTGATAAGTTGGACATTTTTTTCGCTGACGATCTGTTTAAATATGAGTCAGTATGCATCGCCGCGATGGAACATTTAAAAAGTAAGGCAACGGCCCCTATACAAAACGGACCGTTGCCAGCATAA", + "dna_sequence_length": 804, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1719", + "location": [ + [ + "NC_000913", + 1813132, + "-", + 804 + ] + ], + "md5": "e9280cfedff630d2e70114593ab05957", + "parent_gene": "", + "protein_md5": "b6300e0f8eb33ec87f6c92493e53e91e", + "protein_translation": "MFSTNLIQSNYGDLNIKSLAFDSFKERLQSTMTALTFFISTGQCDCDEIAESNFNYMIAYMSNINYDASKPGAPALSFDTYLQDNVKYRVIINNLYGSEIRIRGINKDFIGMDVTSVFRPEKMTNLISIKNRLVIHYLRTIYYEQNYIHPVGSIFAAIQKNESLLKFPSIISMLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLSFSLQAHSLSQECIDKLDIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005776" + ], + [ + "gene_synonym", + "ECK1729" + ], + [ + "gene_synonym", + "EcoGene:EG13992" + ], + [ + "gene_synonym", + "GI:145698276" + ], + [ + "gene_synonym", + "GeneID:946235" + ], + [ + "gene_synonym", + "JW1720" + ], + [ + "gene_synonym", + "NP_416245.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE60" + ], + [ + "gene_synonym", + "b1731" + ], + [ + "gene_synonym", + "cedA" + ], + [ + "gene_synonym", + "ydjP" + ] + ], + "dna_sequence": "ATGAAGAAACCGCTCCGCCAGCAAAACCGCCAGATTATTAGCTATGTCCCACGCACGGAACCCGCGCCGCCAGAACATGCGATAAAGATGGATTCGTTTCGTGATGTCTGGATGCTGCGTGGCAAATATGTTGCGTTTGTACTGATGGGAGAGTCATTTCTGCGCTCACCGGCGTTTACTGTGCCTGAATCTGCCCAACGTTGGGCAAATCAGATCCGCCAGGAAGGGGAAGTGACTGAGTAA", + "dna_sequence_length": 243, + "functions": [ + "cell division modulator" + ], + "id": "CDS_1720", + "location": [ + [ + "NC_000913", + 1813663, + "-", + 243 + ] + ], + "md5": "3ade9149ad5d9d29d87a4e2c2d8cb798", + "parent_gene": "", + "protein_md5": "b38cefdfd3bdda057a46ab07a66bcd72", + "protein_translation": "MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005780" + ], + [ + "gene_synonym", + "ECK1730" + ], + [ + "gene_synonym", + "EcoGene:EG10509" + ], + [ + "gene_synonym", + "GI:49176140" + ], + [ + "gene_synonym", + "GeneID:946234" + ], + [ + "gene_synonym", + "JW1721" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21179" + ], + [ + "gene_synonym", + "YP_025308.1" + ], + [ + "gene_synonym", + "b1732" + ], + [ + "gene_synonym", + "katE" + ] + ], + "dna_sequence": "ATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTGACCATGAGCGCATTCCGGAACGTATTGTTCATGCACGCGGATCAGCCGCTCACGGTTATTTCCAGCCATATAAAAGCTTAAGCGATATTACCAAAGCGGATTTCCTCTCAGATCCGAACAAAATCACCCCAGTATTTGTACGTTTCTCTACCGTTCAGGGTGGTGCTGGCTCTGCTGATACCGTGCGTGATATCCGTGGCTTTGCCACCAAGTTCTATACCGAAGAGGGTATTTTTGACCTCGTTGGCAATAACACGCCAATCTTCTTTATCCAGGATGCGCATAAATTCCCCGATTTTGTTCATGCGGTAAAACCAGAACCGCACTGGGCAATTCCACAAGGGCAAAGTGCCCACGATACTTTCTGGGATTATGTTTCTCTGCAACCTGAAACTCTGCACAACGTGATGTGGGCGATGTCGGATCGCGGCATCCCCCGCAGTTACCGCACCATGGAAGGCTTCGGTATTCACACCTTCCGCCTGATTAATGCCGAAGGGAAGGCAACGTTTGTACGTTTCCACTGGAAACCACTGGCAGGTAAAGCCTCACTCGTTTGGGATGAAGCACAAAAACTCACCGGACGTGACCCGGACTTCCACCGCCGCGAGTTGTGGGAAGCCATTGAAGCAGGCGATTTTCCGGAATACGAACTGGGCTTCCAGTTGATTCCTGAAGAAGATGAATTCAAGTTCGACTTCGATCTTCTCGATCCAACCAAACTTATCCCGGAAGAACTGGTGCCCGTTCAGCGTGTCGGCAAAATGGTGCTCAATCGCAACCCGGATAACTTCTTTGCTGAAAACGAACAGGCGGCTTTCCATCCTGGGCATATCGTGCCGGGACTGGACTTCACCAACGATCCGCTGTTGCAGGGACGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACACTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAATCATACCAGGAGCGCGTGGAAGGCAATAAAGTTCGCGAGCGCAGCCCATCGTTTGGCGAATATTATTCCCATCCGCGTCTGTTCTGGCTAAGTCAGACGCCATTTGAGCAGCGCCATATTGTCGATGGTTTCAGTTTTGAGTTAAGCAAAGTCGTTCGTCCGTATATTCGTGAGCGCGTTGTTGACCAGCTGGCGCATATTGATCTCACTCTGGCCCAGGCGGTGGCGAAAAATCTCGGTATCGAACTGACTGACGACCAGCTGAATATCACCCCACCTCCGGACGTCAACGGTCTGAAAAAGGATCCATCCTTAAGTTTGTACGCCATTCCTGACGGTGATGTGAAAGGTCGCGTGGTAGCGATTTTACTTAATGATGAAGTGAGATCGGCAGACCTTCTGGCCATTCTCAAGGCGCTGAAGGCCAAAGGCGTTCATGCCAAACTGCTCTACTCCCGAATGGGTGAAGTGACTGCGGATGACGGTACGGTGTTGCCTATAGCCGCTACCTTTGCCGGTGCACCTTCGCTGACGGTCGATGCGGTCATTGTCCCTTGCGGCAATATCGCGGATATCGCTGACAACGGCGATGCCAACTACTACCTGATGGAAGCCTACAAACACCTTAAACCGATTGCGCTGGCGGGTGACGCGCGCAAGTTTAAAGCAACAATCAAGATCGCTGACCAGGGTGAAGAAGGGATTGTGGAAGCTGACAGCGCTGACGGTAGTTTTATGGATGAACTGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGA", + "dna_sequence_length": 2262, + "functions": [ + "catalase HPII, heme d-containing" + ], + "id": "CDS_1721", + "location": [ + [ + "NC_000913", + 1813867, + "+", + 2262 + ] + ], + "md5": "0f643486b67bfcbb7dffd6a647c72132", + "parent_gene": "", + "protein_md5": "589687f29044664c2aac707b0f97823c", + "protein_translation": "MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005783" + ], + [ + "gene_synonym", + "ECK1731" + ], + [ + "gene_synonym", + "EcoGene:EG12198" + ], + [ + "gene_synonym", + "GI:16129687" + ], + [ + "gene_synonym", + "GeneID:946231" + ], + [ + "gene_synonym", + "JW1722" + ], + [ + "gene_synonym", + "NP_416247.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37794" + ], + [ + "gene_synonym", + "b1733" + ], + [ + "gene_synonym", + "celG" + ], + [ + "gene_synonym", + "chbG" + ], + [ + "gene_synonym", + "ydjC" + ] + ], + "dna_sequence": "ATGGAACGCTTACTGATTGTTAATGCCGATGATTTTGGCTTAAGCAAAGGTCAGAACTACGGCATTATCGAGGCCTGTCGCAATGGGATTGTCACGTCGACGACGGCGCTGGTGAATGGGCAGGCTATTGACCATGCGGTGCAGTTGAGTCGTGATGAACCGAGTCTGGCCATAGGGATGCACTTTGTCCTTACTATGGGTAAGCCACTGACAGCTATGCCGGGGTTAACCCGCGATGGTGTGCTGGGAAAATGGATCTGGCAGTTGGCAGAAGAAGATGCTTTACCGCTGGAAGAAATTACTCAGGAGCTTGTCAGTCAGTATTTGCGTTTCATTGAGCTATTTGGACGCAAACCTACGCATCTTGATAGCCATCATCATGTGCATATGTTCCCGCAGATTTTCCCGATTGTTGCCAGGTTTGCGGCAGAGCAGGGCATTGCGTTGCGGGCGGATCGTCAGATGGCGTTTGATTTGCCGGTCAACCTGCGCACTACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGATGACGCAGGCCATCGGGGTGATCGTTCGCTGGAGGTGATGTGTCATCCGGCGTTTATCGATAATACTATCCGTCAGAGTGCTTACTGTTTCCCACGCTTAACGGAGCTGGATGTGTTGACATCAGCGTCGTTGAAAGGTGCTATCGCTCAGCGTGGTTATCGGTTGGGGAGTTATCGGGATGTGTAA", + "dna_sequence_length": 750, + "functions": [ + "chito-oligosaccharide deacetylase" + ], + "id": "CDS_1722", + "location": [ + [ + "NC_000913", + 1817135, + "-", + 750 + ] + ], + "md5": "5c06eb9c621c2baa05369b0f1f5161c9", + "parent_gene": "", + "protein_md5": "b0a7142fddbbed4a3af1f7b0f993e0ca", + "protein_translation": "MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDLPVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQRGYRLGSYRDV", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005785" + ], + [ + "gene_synonym", + "ECK1732" + ], + [ + "gene_synonym", + "EcoGene:EG10144" + ], + [ + "gene_synonym", + "GI:16129688" + ], + [ + "gene_synonym", + "GeneID:946266" + ], + [ + "gene_synonym", + "JW1723" + ], + [ + "gene_synonym", + "NP_416248.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17411" + ], + [ + "gene_synonym", + "b1734" + ], + [ + "gene_synonym", + "celF" + ], + [ + "gene_synonym", + "chbF" + ], + [ + "gene_synonym", + "ydjD" + ] + ], + "dna_sequence": "ATGAGCCAGAAATTAAAAGTCGTCACTATTGGTGGCGGGAGCAGCTATACCCCGGAGTTACTGGAAGGATTTATTAAGCGTTATCACGAATTGCCGGTCAGCGAATTATGGCTGGTGGATGTCGAAGGTGGTAAACCGAAACTGGATATTATTTTCGATCTCTGCCAACGGATGATTGATAACGCTGGCGTCCCGATGAAGCTTTATAAAACGCTGGATCGCCGCGAAGCATTGAAAGATGCTGATTTCGTTACTACCCAACTGCGCGTTGGCCAATTACCGGCGCGTGAACTGGATGAACGTATTCCATTAAGTCATGGTTATCTTGGTCAGGAAACCAACGGCGCGGGCGGTTTGTTTAAAGGTCTGCGTACCATTCCGGTGATTTTTGACATCGTAAAAGATGTCGAAGAACTTTGTCCGAATGCATGGGTGATTAACTTCACTAACCCGGCGGGAATGGTCACTGAAGCCGTTTATCGTCATACCGGATTTAAACGCTTTATCGGCGTGTGTAATATTCCGATCGGCATGAAGATGTTTATTCGCGATGTTCTGATGCTGAAAGACAGCGATGATTTATCTATCGATTTGTTCGGCCTCAACCATATGGTGTTCATTAAGGATGTGCTGATAAATGGCAAGTCGCGCTTTGCCGAATTGCTTGATGGTGTGGCGTCAGGGCAGTTAAAAGCGTCCTCTGTAAAAAATATTTTCGATCTGCCATTTAGTGAGGGCTTAATTCGTTCGTTGAATCTGCTGCCATGTTCTTATCTGCTGTATTACTTCAAGCAGAAAGAGATGCTGGCTATTGAAATGGGCGAATACTACAAAGGCGGCGCACGAGCGCAGGTAGTACAGAAAGTCGAGAAACAACTTTTTGAGCTGTATAAAAATCCTGAGCTGAAAGTTAAGCCGAAAGAACTGGAACAGCGCGGTGGGGCTTATTACTCTGATGCAGCATGCGAAGTGATCAACGCTATCTACAACGACAAGCAAGCAGAACATTACGTTAATATCCCGCATCATGGGCAGATTGATAATATTCCGGCAGACTGGGCAGTAGAAATGACCTGTAAGCTGGGGCGCGATGGCGCGACGCCACATCCGCGCATTACGCATTTCGATGATAAAGTAATGGGGCTGATTCACACCATTAAAGGCTTCGAGATTGCTGCCAGTAACGCCGCACTTAGCGGAGAATTTAACGATGTGTTACTGGCGCTAAACCTTAGTCCGTTGGTGCATTCCGATCGCGATGCTGAGCTGCTGGCACGCGAGATGATTCTGGCGCACGAGAAATGGCTGCCAAACTTTGCCGACTGCATCGCAGAGCTTAAAAAAGCACATTAA", + "dna_sequence_length": 1353, + "functions": [ + "phospho-chitobiase", + "general 6-phospho-beta-glucosidase activity" + ], + "id": "CDS_1723", + "location": [ + [ + "NC_000913", + 1818500, + "-", + 1353 + ] + ], + "md5": "3be123bf42e4a221093df06dea635d23", + "parent_gene": "", + "protein_md5": "f1d1347632f282df4eb68fc0a37c4911", + "protein_translation": "MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLINGKSRFAELLDGVASGQLKASSVKNIFDLPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005790" + ], + [ + "gene_synonym", + "ECK1733" + ], + [ + "gene_synonym", + "EcoGene:EG10143" + ], + [ + "gene_synonym", + "GI:16129689" + ], + [ + "gene_synonym", + "GeneID:946247" + ], + [ + "gene_synonym", + "JW1724" + ], + [ + "gene_synonym", + "NP_416249.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17410" + ], + [ + "gene_synonym", + "b1735" + ], + [ + "gene_synonym", + "celD" + ], + [ + "gene_synonym", + "chbR" + ] + ], + "dna_sequence": "ATGATGCAGCCAGTGATTAACGCGCCGGAAATTGCCACTGCCCGAGAACAGCAGTTGTTTAATGGCAAAAACTTCCATGTGTTTATCTATAACAAAACTGAGAGTATCAGCGGACTGCATCAGCACGACTATTATGAATTTACTCTGGTATTAACCGGGCGTTATTTCCAGGAGATTAACGGTAAGCGCGTGTTACTGGAACGGGGCGATTTTGTTTTTATTCCGTTAGGTTCGCACCATCAAAGTTTTTATGAGTTTGGTGCCACGCGCATATTGAACGTTGGGATCAGTAAACGCTTTTTTGAGCAGCATTACCTGCCATTGTTGCCTTATTGCTTTGTCGCTTCGCAGGTATACCGGACCAATAACGCTTTTCTCACCTATGTGGAAACAGTGATTTCTTCATTGAATTTCCGCGAAACAGGGCTGGAAGAGTTTGTTGAGATGGTTACTTTTTATGTCATTAACCGTTTACGTCATTACCGCGAAGAACAGGTGATTGATGATGTACCGCAGTGGCTGAAAAGTACGGTAGAAAAGATGCATGATAAAGAGCAGTTTAGTGAATCGGCGCTGGAGAATATGGTGGCGTTGTCAGCCAAATCACAGGAATATTTGACGCGAGCGACTCAACGATATTATGGCAAAACGCCAATGCAGATTATTAATGAAATCCGTATTAATTTTGCCAAAAAACAACTGGAAATGACCAACTATTCAGTGACGGATATTGCGTTTGAGGCCGGTTATAGTAGCCCGAGTTTGTTTATTAAAACGTTTAAGAAATTAACGTCCTTTACGCCTAAGAGCTATCGTAAGAAATTGACTGAATTTAATCAGTAA", + "dna_sequence_length": 843, + "functions": [ + "repressor of chb operon for N,N'-diacetylchitobiose utilization" + ], + "id": "CDS_1724", + "location": [ + [ + "NC_000913", + 1819447, + "-", + 843 + ] + ], + "md5": "278ef93eed0bdb351ba6d38e5a9190fb", + "parent_gene": "", + "protein_md5": "d8d0320c909ab4012575b41505f8932d", + "protein_translation": "MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005792" + ], + [ + "gene_synonym", + "ECK1734" + ], + [ + "gene_synonym", + "EcoGene:EG10142" + ], + [ + "gene_synonym", + "GI:16129690" + ], + [ + "gene_synonym", + "GeneID:946244" + ], + [ + "gene_synonym", + "JW1725" + ], + [ + "gene_synonym", + "NP_416250.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69791" + ], + [ + "gene_synonym", + "b1736" + ], + [ + "gene_synonym", + "celC" + ], + [ + "gene_synonym", + "chbA" + ] + ], + "dna_sequence": "ATGATGGATCTCGATAACATTCCCGATACGCAAACGGAAGCTGAAGAGCTGGAAGAAGTGGTGATGGGGCTGATCATCAACTCCGGACAAGCGCGCAGCCTGGCGTATGCGGCACTGAAACAGGCGAAGCAGGGCGATTTTGCCGCAGCAAAAGCCATGATGGATCAGTCACGGATGGCATTGAATGAAGCGCATCTGGTACAGACGAAACTGATTGAAGGCGATGCGGGCGAAGGTAAGATGAAAGTGAGTCTGGTGCTGGTCCACGCTCAGGATCATTTAATGACGTCCATGCTTGCGCGTGAACTGATTACTGAATTAATTGAGCTTCATGAAAAACTGAAGGCATAA", + "dna_sequence_length": 351, + "functions": [ + "N,N'-diacetylchitobiose-specific enzyme IIA component of PTS" + ], + "id": "CDS_1725", + "location": [ + [ + "NC_000913", + 1819805, + "-", + 351 + ] + ], + "md5": "5ba14c77e02b3aac21ab3bb5d3cb293c", + "parent_gene": "", + "protein_md5": "a0de2a6a74b4128dddc5bc89c77b6413", + "protein_translation": "MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005795" + ], + [ + "gene_synonym", + "ECK1735" + ], + [ + "gene_synonym", + "EcoGene:EG10141" + ], + [ + "gene_synonym", + "GI:16129691" + ], + [ + "gene_synonym", + "GeneID:945982" + ], + [ + "gene_synonym", + "JW1726" + ], + [ + "gene_synonym", + "NP_416251.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17334" + ], + [ + "gene_synonym", + "b1737" + ], + [ + "gene_synonym", + "celB" + ], + [ + "gene_synonym", + "chbC" + ] + ], + "dna_sequence": "ATGAGTAATGTTATTGCATCGCTTGAAAAGGTACTCCTCCCTTTTGCAGTTAAAATAGGAAAGCAGCCACACGTTAATGCAATCAAAAATGGCTTTATTCGCTTAATGCCGTTAACCCTTGCGGGGGCCATGTTTGTATTAATTAACAACGTTTTTCTAAGCTTTGGGGAGGGGTCGTTTTTTTATTCCTTAGGTATTCGCCTCGACGCCTCAACCATTGAAACACTTAATGGTCTGAAAGGTATTGGCGGCAACGTATATAACGGAACATTAGGAATAATGTCTTTAATGGCACCGTTCTTTATTGGCATGGCGCTGGCAGAAGAGCGTAAAGTCGATGCGCTGGCGGCTGGGTTGTTATCCGTTGCAGCATTTATGACCGTCACCCCATATAGTGTCGGTGAGGCCTATGCGGTTGGTGCAAACTGGTTAGGTGGGGCGAATATCATCTCCGGGATTATTATTGGCCTGGTGGTGGCAGAAATGTTTACCTTTATTGTCCGCCGCAATTGGGTCATTAAACTGCCCGACAGCGTACCTGCTTCAGTATCGCGTTCCTTCTCGGCATTAATTCCCGGCTTTATTATTCTTTCCGTGATGGGGATTATTGCCTGGGCGTTGAATACCTGGGGCACCAACTTCCATCAGATCATTATGGATACCATCTCAACCCCACTGGCATCGTTGGGTAGCGTGGTGGGCTGGGCCTATGTGATCTTTGTTCCACTGCTCTGGTTCTTCGGTATTCATGGCGCGCTGGCGCTGACCGCACTGGACAACGGCATTATGACGCCGTGGGCACTGGAAAATATCGCGACCTATCAGCAATATGGTTCCGTCGAAGCGGCGCTGGCAGCCGGTAAGACCTTCCATATCTGGGCCAAGCCGATGCTGGACTCCTTTATTTTCCTTGGGGGCAGTGGTGCGACTTTAGGCCTGATCCTGGCTATCTTTATCGCCTCTCGCCGTGCTGATTATCGTCAGGTGGCAAAACTGGCGCTGCCGTCCGGCATCTTCCAGATTAACGAACCGATTCTGTTTGGTCTGCCAATTATCATGAACCCGGTGATGTTTATCCCGTTTGTACTGGTACAACCGATTCTGGCGGCAATCACCCTCGCAGCGTACTACATGGGCATTATTCCTCCGGTGACCAATATTGCACCGTGGACCATGCCAACCGGTCTGGGAGCCTTCTTTAACACCAACGGTAGCGTCGCCGCATTGCTGGTCGCACTCTTCAACCTTGGCATCGCAACGTTAATTTATCTGCCCTTTGTTGTGGTGGCTAACAAAGCACAAAATGCGATTGATAAAGAAGAGAGCGAAGAAGATATCGCTAACGCCCTGAAATTTTAA", + "dna_sequence_length": 1359, + "functions": [ + "N,N'-diacetylchitobiose-specific enzyme IIC component of PTS" + ], + "id": "CDS_1726", + "location": [ + [ + "NC_000913", + 1821214, + "-", + 1359 + ] + ], + "md5": "e2149fb45fbea652d0d499f9dcf19f70", + "parent_gene": "", + "protein_md5": "262941250e9eb4da5045bc6dd94d0b04", + "protein_translation": "MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSFFYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLLSVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVPASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIFVPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005797" + ], + [ + "gene_synonym", + "ECK1736" + ], + [ + "gene_synonym", + "EcoGene:EG10140" + ], + [ + "gene_synonym", + "GI:16129692" + ], + [ + "gene_synonym", + "GeneID:945339" + ], + [ + "gene_synonym", + "JW1727" + ], + [ + "gene_synonym", + "NP_416252.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69795" + ], + [ + "gene_synonym", + "b1738" + ], + [ + "gene_synonym", + "celA" + ], + [ + "gene_synonym", + "chbB" + ] + ], + "dna_sequence": "ATGGAAAAGAAACACATTTATCTGTTTTGTTCTGCGGGCATGTCTACCTCTTTACTGGTATCAAAAATGCGCGCACAGGCAGAAAAATATGAAGTTCCGGTCATTATTGAAGCATTTCCGGAAACACTGGCTGGTGAAAAAGGTCAGAATGCCGATGTCGTGTTATTAGGGCCGCAGATTGCTTATATGTTGCCCGAAATCCAGCGTTTGTTACCCAACAAACCGGTTGAAGTAATTGACTCGCTGCTTTATGGCAAAGTCGATGGTTTAGGCGTGCTTAAGGCTGCGGTTGCAGCGATTAAAAAAGCCGCAGCAAATTAA", + "dna_sequence_length": 321, + "functions": [ + "N,N'-diacetylchitobiose-specific enzyme IIB component of PTS" + ], + "id": "CDS_1727", + "location": [ + [ + "NC_000913", + 1821619, + "-", + 321 + ] + ], + "md5": "d94d820aab3503d6ccc6c0d34a749845", + "parent_gene": "", + "protein_md5": "e50988174a047faa057f9a6d0fa0d53b", + "protein_translation": "MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005799" + ], + [ + "gene_synonym", + "ECK1737" + ], + [ + "gene_synonym", + "EcoGene:EG10044" + ], + [ + "gene_synonym", + "GI:16129693" + ], + [ + "gene_synonym", + "GeneID:945305" + ], + [ + "gene_synonym", + "JW1728" + ], + [ + "gene_synonym", + "NP_416253.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADB1" + ], + [ + "gene_synonym", + "anr" + ], + [ + "gene_synonym", + "b1739" + ], + [ + "gene_synonym", + "osmE" + ] + ], + "dna_sequence": "ATGAACAAGAATATGGCAGGAATTCTGAGTGCAGCGGCGGTATTAACCATGCTGGCGGGTTGTACGGCTTATGATCGTACCAAAGACCAGTTTGTACAGCCTGTGGTGAAAGACGTCAAAAAAGGCATGAGCCGGGCGCAGGTTGCACAAATTGCGGGTAAACCTTCGTCTGAAGTGAGCATGATCCATGCTCGCGGTACTTGCCAGACCTACATCCTGGGTCAACGTGATGGTAAAGCAGAAACCTACTTTGTCGCGTTAGATGATACCGGACATGTCATCAACTCCGGTTATCAGACCTGTGCTGAATACGACACTGATCCACAGGCTGCGAAGTAA", + "dna_sequence_length": 339, + "functions": [ + "osmotically-inducible lipoprotein" + ], + "id": "CDS_1728", + "location": [ + [ + "NC_000913", + 1822256, + "-", + 339 + ] + ], + "md5": "77d48f2c4703ea6bbc3d62724edcf708", + "parent_gene": "", + "protein_md5": "80ee582081650fc1058f330ea6212f00", + "protein_translation": "MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQAAK", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005803" + ], + [ + "gene_synonym", + "ECK1738" + ], + [ + "gene_synonym", + "EcoGene:EG10663" + ], + [ + "gene_synonym", + "GI:16129694" + ], + [ + "gene_synonym", + "GeneID:946946" + ], + [ + "gene_synonym", + "JW1729" + ], + [ + "gene_synonym", + "NP_416254.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18843" + ], + [ + "gene_synonym", + "b1740" + ], + [ + "gene_synonym", + "efg" + ], + [ + "gene_synonym", + "nadE" + ], + [ + "gene_synonym", + "ntrL" + ] + ], + "dna_sequence": "ATGACATTGCAACAACAAATAATAAAGGCGCTGGGCGCAAAACCGCAGATTAATGCTGAAGAGGAAATTCGTCGTAGTGTCGATTTTCTGAAAAGCTACCTGCAAACTTATCCGTTCATTAAATCACTGGTGCTCGGGATCAGCGGCGGTCAGGACTCCACGCTTGCCGGAAAGCTGTGCCAGATGGCGATTAATGAGCTGCGCCTGGAAACCGGCAACGAATCACTGCAATTTATTGCCGTACGCCTGCCCTATGGTGTTCAGGCCGACGAACAAGATTGCCAGGATGCCATTGCCTTTATTCAACCGGATCGCGTATTAACCGTTAATATCAAGGGCGCGGTATTGGCCAGCGAACAGGCATTGCGGGAAGCAGGCATTGAACTGAGCGATTTTGTCCGTGGCAATGAAAAAGCGCGTGAGCGGATGAAAGCACAATATAGCATTGCGGGTATGACCAGCGGTGTCGTGGTGGGCACCGATCATGCAGCAGAAGCCATTACCGGATTCTTCACTAAATATGGTGACGGCGGTACGGACATTAATCCGCTGTATCGTCTCAACAAACGTCAGGGTAAACAGTTACTGGCGGCATTAGCTTGCCCGGAACACCTTTATAAGAAAGCGCCAACGGCCGATCTGGAAGATGATCGCCCTTCTCTGCCAGATGAAGTGGCACTCGGCGTGACCTATGACAATATCGACGACTATCTGGAAGGGAAAAACGTACCTCAACAGGTCGCCAGAACAATAGAGAACTGGTATCTGAAAACCGAACATAAACGCCGTCCGCCAATTACCGTTTTCGATGATTTCTGGAAAAAGTAA", + "dna_sequence_length": 828, + "functions": [ + "NAD synthetase, NH3/glutamine-dependent" + ], + "id": "CDS_1729", + "location": [ + [ + "NC_000913", + 1822458, + "+", + 828 + ] + ], + "md5": "baab79ac589578e705939d245d5c8cf2", + "parent_gene": "", + "protein_md5": "ea37cb76b651f90db9b8d4dbf6861145", + "protein_translation": "MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005807" + ], + [ + "gene_synonym", + "ECK1739" + ], + [ + "gene_synonym", + "EcoGene:EG13993" + ], + [ + "gene_synonym", + "GI:16129695" + ], + [ + "gene_synonym", + "GeneID:948996" + ], + [ + "gene_synonym", + "JW1730" + ], + [ + "gene_synonym", + "NP_416255.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76213" + ], + [ + "gene_synonym", + "b1741" + ], + [ + "gene_synonym", + "cho" + ], + [ + "gene_synonym", + "dinM" + ], + [ + "gene_synonym", + "sosD" + ], + [ + "gene_synonym", + "ydjQ" + ] + ], + "dna_sequence": "GTGGTACGGCGTTTAACTTCTCCGCGGCTCGAATTTGAAGCTGCGGCAATTTATGAATATCCCGAACATTTACGTTCATTCCTTAATGACTTACCCACCCGACCAGGGGTGTATCTGTTTCATGGTGAAAGTGACACCATGCCGCTCTATATCGGCAAAAGCGTTAACATCCGCAGCCGCGTCCTTTCTCATTTACGTACCCCGGATGAAGCCGCCATGCTACGGCAATCCCGACGGATCAGCTGGATATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTGCTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGCCATGAGGAACATGCGCTACGCTTGCGCCAGTCTCTGGAGCGTTTGCGGGTGGTGTGTTGGCCTTGGCAAGGGGCGGTGGCGCTGAAAGAACAGCACCCGGAAATGACTCAATATCATATTATTCAAAACTGGCTGTGGCTGGGGGCGGTTAATTCGCTGGAAGAAGCGACAACGTTAATTCGGACACCCGCCGGGTTTGATCACGACGGTTATAAAATTCTTTGTAAGCCGCTGCTTTCCGGTAACTATGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGA", + "dna_sequence_length": 888, + "functions": [ + "endonuclease of nucleotide excision repair" + ], + "id": "CDS_1730", + "location": [ + [ + "NC_000913", + 1823515, + "+", + 888 + ] + ], + "md5": "5adf41217070dffc55199493eca2f7db", + "parent_gene": "", + "protein_md5": "acaefd68e6041737c332f5de9233f3b7", + "protein_translation": "MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005809" + ], + [ + "gene_synonym", + "ECK1740" + ], + [ + "gene_synonym", + "EcoGene:EG13994" + ], + [ + "gene_synonym", + "GI:90111320" + ], + [ + "gene_synonym", + "GeneID:946245" + ], + [ + "gene_synonym", + "JW1731" + ], + [ + "gene_synonym", + "NP_416256.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76214" + ], + [ + "gene_synonym", + "b1742" + ], + [ + "gene_synonym", + "ves" + ], + [ + "gene_synonym", + "ydjR" + ] + ], + "dna_sequence": "ATGGAATACTTTGATATGCGTAAAATGTCGGTGAATCTGTGGCGAAATGCTGCCGGTGAAACGCGCGAAATTTGCACGTTCCCACCGGCAAAACGTGATTTTTACTGGCGTGCCAGCATTGCATCCATCGCGGCGAATGGGGAGTTTTCTTTGTTTCCCGGCATGGAAAGGATAGTGACGTTGCTGGAAGGCGGCGAGATGCTCCTTGAAAGCGCAGACCGCTTTAACCATACCTTAAAACCGTTCCAGCCTTTTGCCTTTGCAGCGGACCAGGTGGTAAAAGCGAAACTGACGGCAGGGCAGATGTCGATGGATTTCAACATCATGACACGCCTGGATGTCTGTAAGGCGAAAGTCAGAATTGCCGAACGTACGTTTACTACCTTTGGCTCACGCGGCGGGGTGGTGTTTGTGATTAACGGGGCGTGGCAACTGGGCGATAAATTGCTCACTACCGACCAGGGCGCGTGCTGGTTCGATGGCAGGCACACCCTGCGGCTTTTACAACCGCAAGGTAAACTGTTGTTCAGTGAAATCAACTGGCTCGCTGGTCATTCGCCGGATCAAGTTCAGTAA", + "dna_sequence_length": 576, + "functions": [ + "cold- and stress-inducible protein" + ], + "id": "CDS_1731", + "location": [ + [ + "NC_000913", + 1824937, + "-", + 576 + ] + ], + "md5": "14825e70563be971ce4a08965a7ab758", + "parent_gene": "", + "protein_md5": "cf041ac51fd87adcd5c8f2a87e24742f", + "protein_translation": "MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPFQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005812" + ], + [ + "gene_synonym", + "ECK1741" + ], + [ + "gene_synonym", + "EcoGene:EG13490" + ], + [ + "gene_synonym", + "GI:16129697" + ], + [ + "gene_synonym", + "GeneID:946253" + ], + [ + "gene_synonym", + "JW1732" + ], + [ + "gene_synonym", + "NP_416257.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77754" + ], + [ + "gene_synonym", + "b1743" + ], + [ + "gene_synonym", + "spy" + ] + ], + "dna_sequence": "ATGCGTAAATTAACTGCACTGTTTGTTGCCTCTACCCTGGCTCTTGGCGCGGCTAACCTGGCCCATGCCGCAGACACCACTACCGCAGCACCGGCTGACGCGAAGCCGATGATGCACCACAAAGGCAAGTTCGGTCCGCATCAGGACATGATGTTCAAAGACCTGAACCTGACCGACGCGCAGAAACAGCAGATCCGCGAAATCATGAAAGGCCAGCGTGACCAGATGAAACGTCCGCCGCTGGAAGAACGCCGCGCAATGCATGACATCATTGCCAGCGATACCTTCGATAAAGTAAAAGCTGAAGCGCAGATCGCAAAAATGGAAGAACAGCGCAAAGCTAACATGCTGGCGCACATGGAAACCCAGAACAAAATTTACAACATCCTGACGCCGGAACAGAAAAAGCAATTTAATGCTAATTTTGAGAAGCGTCTGACAGAACGTCCAGCGGCAAAAGGTAAAATGCCTGCAACTGCTGAATAA", + "dna_sequence_length": 486, + "functions": [ + "periplasmic ATP-independent protein refolding chaperone, stress-induced" + ], + "id": "CDS_1732", + "location": [ + [ + "NC_000913", + 1825625, + "-", + 486 + ] + ], + "md5": "e800179631beb7c09d19c5bd9fe16bbd", + "parent_gene": "", + "protein_md5": "3053db65ad689963a9ed3c8eb81b43dd", + "protein_translation": "MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKVKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005815" + ], + [ + "gene_synonym", + "ECK1742" + ], + [ + "gene_synonym", + "EcoGene:EG13995" + ], + [ + "gene_synonym", + "GI:16129698" + ], + [ + "gene_synonym", + "GeneID:946256" + ], + [ + "gene_synonym", + "JW1733" + ], + [ + "gene_synonym", + "NP_416258.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76215" + ], + [ + "gene_synonym", + "astE" + ], + [ + "gene_synonym", + "b1744" + ], + [ + "gene_synonym", + "ydjS" + ] + ], + "dna_sequence": "ATGGATAATTTTCTTGCTCTGACCTTAACGGGTAAAAAACCGGTTATCACCGAGCGAGAAATCAACGGCGTTCGCTGGCGCTGGCTGGGCGATGGTGTGCTGGAACTGACGCCATTAACGCCACCGCAAGGCGCACTGGTGATTTCAGCGGGAATACACGGTAATGAGACGGCACCTGTGGAGATGCTGGACGCGTTGCTTGGCGCGATATCTCACGGCGAGATCCCGTTACGTTGGCGGTTGCTGGTGATCCTCGGGAATCCTCCTGCGCTGAAGCAAGGGAAACGTTATTGCCATAGCGATATGAATCGAATGTTTGGCGGTCGTTGGCAGCTATTTGCTGAAAGCGGAGAAACCTGTCGGGCGCGCGAACTGGAACAGTGCCTGGAAGATTTTTATGACCAGGGCAAAGAATCTGTGCGCTGGCACCTTGATCTACATACCGCAATTCGTGGCTCCTTGCATCCGCAGTTCGGTGTATTACCGCAACGCGACATTCCCTGGGACGAGAAATTTCTGACGTGGCTGGGTGCGGCGGGGCTGGAGGCGCTGGTGTTCCATCAGGAACCTGGTGGTACGTTTACCCATTTCAGCGCCAGACATTTTGGCGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGTTTCGCAAATTACTCGCCACTCGCCGTCCTTCGAAATGCATATGGCAAGTGACACGCTGAATTTTATGCCGTTTGAGAAAGGAACATTGCTGGCGCAGGACGGAGAGGAACGTTTTACCGTAACCCATGATGTAGAGTATGTGTTATTCCCTAATCCGTTGGTAGCGTTGGGATTACGCGCGGGATTAATGCTCGAAAAAATAAGCTAA", + "dna_sequence_length": 969, + "functions": [ + "succinylglutamate desuccinylase" + ], + "id": "CDS_1733", + "location": [ + [ + "NC_000913", + 1826923, + "-", + 969 + ] + ], + "md5": "4fee0e37e763c02bfa1f288dd2bd5542", + "parent_gene": "", + "protein_md5": "40238e118d2cf8c8336ac5ef71cb2ea7", + "protein_translation": "MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQGALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS", + "protein_translation_length": 322, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005817" + ], + [ + "gene_synonym", + "ECK1743" + ], + [ + "gene_synonym", + "EcoGene:EG13996" + ], + [ + "gene_synonym", + "GI:16129699" + ], + [ + "gene_synonym", + "GeneID:946259" + ], + [ + "gene_synonym", + "JW1734" + ], + [ + "gene_synonym", + "NP_416259.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76216" + ], + [ + "gene_synonym", + "astB" + ], + [ + "gene_synonym", + "b1745" + ], + [ + "gene_synonym", + "ydjT" + ] + ], + "dna_sequence": "ATGAACGCCTGGGAAGTCAATTTCGACGGGCTGGTAGGGCTGACGCATCATTACGCGGGCCTGTCGTTTGGTAATGAAGCCTCTACCCGTCACCGTTTTCAGGTGTCTAACCCGCGACTGGCGGCGAAGCAGGGCTTACTGAAAATGAAAGCCCTTGCCGATGCGGGATTCCCCCAGGCCGTGATCCCGCCGCACGAGCGTCCGTTTATTCCGGTGCTGCGTCAGTTGGGATTCAGTGGTAGCGATGAGCAGGTACTGGAAAAAGTTGCACGCCAGGCACCGCACTGGCTTTCCAGCGTCAGTTCCGCTTCGCCAATGTGGGTAGCCAATGCGGCAACGATCGCGCCATCTGCCGATACGCTGGATGGCAAAGTGCATCTCACCGTTGCCAACCTGAACAATAAATTTCACCGTTCGCTGGAAGCGCCCGTCACTGAATCGCTGTTAAAAGCGATTTTTAACGACGAAGAGAAATTTAGCGTCCATTCGGCGTTGCCACAGGTAGCGTTGCTCGGTGATGAGGGGGCGGCAAACCACAATCGTCTCGGCGGTCATTACGGTGAACCGGGTATGCAACTTTTTGTCTACGGGCGAGAAGAAGGCAATGATACCCGGCCTTCCCGTTATCCGGCGCGACAGACTCGCGAAGCCAGCGAGGCGGTGGCAAGGCTGAATCAGGTGAATCCCCAACAGGTGATTTTCGCCCAGCAAAACCCGGACGTTATCGACCAGGGCGTTTTTCATAATGACGTGATTGCCGTGAGTAACCGCCAGGTGCTGTTTTGCCACCAACAGGCGTTCGCTCGCCAGTCACAGTTACTGGCAAACCTGCGTGCGCGGGTCAATGGTTTTATGGCGATAGAAGTTCCGGCAACTCAGGTTTCCGTGTCTGATACGGTGTCTACCTATCTGTTTAACAGCCAACTGCTGAGCCGCGATGATGGTTCCATGATGTTGGTGCTGCCTCAGGAGTGTCGGGAACACGCCGGAGTATGGGGTTATCTCAATGAACTCCTTGCCGCTGACAACCCGATTAGCGAACTAAAAGTCTTTGATTTACGTGAAAGCATGGCGAATGGCGGCGGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGAACGATACGCTGTTTAATGCGCTCAATGACTGGGTGGATCGTTACTACCGCGATCGCCTTACTGCTGCCGATCTGGCCGACCCGCAATTGCTGCGCGAAGGGCGGGAAGCACTGGATGTATTGAGCCAATTACTGAATCTCGGTTCGGTTTATCCGTTCCAGCGCGAGGGAGGGGGCAATGGATAA", + "dna_sequence_length": 1344, + "functions": [ + "succinylarginine dihydrolase" + ], + "id": "CDS_1734", + "location": [ + [ + "NC_000913", + 1828259, + "-", + 1344 + ] + ], + "md5": "33d64e5348fa56c6ff8ac8423e32d715", + "parent_gene": "", + "protein_md5": "a3e615cd83f56c78fb611a2e1c7082a0", + "protein_translation": "MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQGLLKMKALADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSSASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFSVHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREASEAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLANLRARVNGFMAIEVPATQVSVSDTVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGYLNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005820" + ], + [ + "gene_synonym", + "ECK1744" + ], + [ + "gene_synonym", + "EcoGene:EG13997" + ], + [ + "gene_synonym", + "GI:16129700" + ], + [ + "gene_synonym", + "GeneID:946260" + ], + [ + "gene_synonym", + "JW5282" + ], + [ + "gene_synonym", + "NP_416260.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76217" + ], + [ + "gene_synonym", + "astD" + ], + [ + "gene_synonym", + "b1746" + ], + [ + "gene_synonym", + "ydjU" + ] + ], + "dna_sequence": "ATGACTTTATGGATTAACGGTGACTGGATAACGGGCCAGGGCGCATCGCGTGTGAAGCGTAATCCGGTATCGGGCGAGGTGTTATGGCAAGGCAATGATGCCGATGCCGCTCAGGTCGAGCAGGCTTGTCGGGCAGCCCGTGCGGCGTTTCCGCGCTGGGCGCGGCTTTCATTTGCTGAACGTCATGCCGTTGTCGAACGCTTTGCCGCACTGCTGGAAAGCAATAAAGCCGAATTAACCGCGATTATTGCCAGAGAAACGGGTAAGCCGCGCTGGGAAGCGGCAACCGAAGTGACGGCGATGATCAATAAAATCGCGATATCAATTAAGGCGTATCACGTTCGTACCGGCGAGCAGCGTAGTGAAATGCCGGACGGCGCGGCGAGCCTGCGACATCGCCCGCACGGCGTGCTGGCGGTGTTTGGGCCGTATAATTTCCCTGGTCATTTGCCGAACGGACATATCGTTCCGGCATTGCTGGCAGGTAACACCATTATCTTTAAACCCAGCGAACTGACACCGTGGAGTGGCGAAGCGGTAATGCGTTTATGGCAGCAGGCTGGCTTGCCGCCAGGCGTGCTGAACCTGGTGCAGGGCGGGCGTGAAACGGGTCAGGCGCTGAGTGCGCTGGAGGATCTCGACGGTTTGCTGTTTACCGGTAGCGCCAATACAGGCTACCAGTTGCATCGCCAGCTCTCCGGTCAGCCGGAGAAAATTCTCGCCCTTGAGATGGGCGGTAATAATCCGCTAATTATCGATGAGGTGGCGGATATCGACGCGGCTGTCCATCTGACCATTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCAGGTGGTTACTGCATGGCAGCAACTGGAAGCGATGGGCGGACGACCCCTGCTTGCGCCGCGCTTATTACAAGCAGGGACATCGTTGCTGACGCCGGGGATCATTGAAATGACAGGCGTTGCTGGCGTACCAGATGAAGAGGTGTTCGGACCGTTATTGCGCGTCTGGCGTTATGATACTTTCGATGAAGCGATTCGAATGGCGAATAACACTCGCTTCGGACTCTCTTGCGGTCTGGTTTCCCCCGAGCGGGAAAAGTTCGATCAACTGTTGCTGGAGGCGCGGGCGGGGATTGTTAACTGGAACAAACCGCTTACCGGTGCTGCCAGTACCGCGCCATTCGGCGGCATTGGTGCTTCCGGTAACCATCGCCCCAGCGCCTGGTATGCCGCAGATTACTGCGCATGGCCGATGGCGAGCCTGGAGTCGGACTCGTTAACATTGCCCGCCACGCTTAACCCCGGGCTGGATTTTTCCGATGAGGTGGTGCGATGA", + "dna_sequence_length": 1479, + "functions": [ + "succinylglutamic semialdehyde dehydrogenase" + ], + "id": "CDS_1735", + "location": [ + [ + "NC_000913", + 1829734, + "-", + 1479 + ] + ], + "md5": "52dd85d87de2499a06ebb238e2180df5", + "parent_gene": "", + "protein_md5": "623bed24036e1a4105d8ca0fbea53e84", + "protein_translation": "MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACRAARAAFPRWARLSFAERHAVVERFAALLESNKAELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAWQQLEAMGGRPLLAPRLLQAGTSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDTFDEAIRMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGNHRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR", + "protein_translation_length": 492, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005822" + ], + [ + "gene_synonym", + "ECK1745" + ], + [ + "gene_synonym", + "EcoGene:EG13998" + ], + [ + "gene_synonym", + "GI:16129701" + ], + [ + "gene_synonym", + "GeneID:946261" + ], + [ + "gene_synonym", + "JW1736" + ], + [ + "gene_synonym", + "NP_416261.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE37" + ], + [ + "gene_synonym", + "astA" + ], + [ + "gene_synonym", + "b1747" + ], + [ + "gene_synonym", + "ydjV" + ] + ], + "dna_sequence": "ATGATGGTCATCCGTCCCGTTGAGCGATCAGATGTCTCGGCGCTGATGCAGCTTGCCAGCAAAACGGGCGGCGGCCTGACGTCGCTTCCCGCCAATGAAGCCACGCTTTCGGCGCGTATCGAAAGGGCAATCAAAACCTGGCAAGGCGAACTGCCCAAAAGTGAGCAGGGCTATGTGTTCGTGCTGGAAGATAGCGAGACAGGCACCGTGGCGGGGATTTGTGCCATTGAGGTGGCGGTTGGGCTGAACGATCCCTGGTACAACTATCGCGTCGGCACGTTGGTTCACGCCTCAAAAGAGCTGAATGTCTATAACGCATTGCCGACGCTGTTTCTCAGTAACGATCACACCGGCAGCAGCGAGCTGTGCACGCTGTTTCTCGACCCGGACTGGCGCAAAGAGGGCAACGGCTATTTGCTGTCGAAATCGCGCTTTATGTTTATGGCGGCTTTTCGCGACAAGTTTAATGACAAAGTGGTTGCTGAAATGCGCGGGGTGATTGACGAACACGGCTATTCACCGTTCTGGCAAAGCCTCGGTAAACGCTTCTTTTCGATGGATTTTAGCCGCGCCGATTTTCTCTGCGGCACCGGGCAAAAGGCATTTATTGCAGAACTGATGCCGAAACATCCGATCTATACCCACTTTTTATCCCAGGAAGCCCAGGACGTCATCGGTCAGGTACATCCGCAAACCGCGCCTGCCCGCGCGGTGCTGGAGAAAGAAGGTTTTCGCTACCGTAACTATATCGACATCTTTGACGGTGGGCCGACGCTTGAGTGTGACATCGACCGCGTGCGCGCCATCCGTAAAAGTCGGCTGGTGGAAGTGGCAGAAGGGCAGCCTGCGCAGGGCGATTTCCCAGCCTGCCTGGTCGCCAATGAAAATTATCACCATTTCCGCGTGGTGCTGGTGCGTACCGATCCGGCAACCGAGCGTTTGATTTTAACCGCCGCACAACTGGATGCCCTCAAATGCCACGCCGGGGATCGCGTTCGTCTGGTGCGCCTGTGCGCAGAGGAGAAAACAGCATGA", + "dna_sequence_length": 1035, + "functions": [ + "arginine succinyltransferase" + ], + "id": "CDS_1736", + "location": [ + [ + "NC_000913", + 1830765, + "-", + 1035 + ] + ], + "md5": "2d6a3f963ea08239e1183c9e0aefdbeb", + "parent_gene": "", + "protein_md5": "2bbf2e847e82d59300e9b6b74fad999d", + "protein_translation": "MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLSQEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHFRVVLVRTDPATERLILTAAQLDALKCHAGDRVRLVRLCAEEKTA", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005824" + ], + [ + "gene_synonym", + "ECK1746" + ], + [ + "gene_synonym", + "EcoGene:EG13999" + ], + [ + "gene_synonym", + "GI:16129702" + ], + [ + "gene_synonym", + "GeneID:946255" + ], + [ + "gene_synonym", + "JW1737" + ], + [ + "gene_synonym", + "NP_416262.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77581" + ], + [ + "gene_synonym", + "argM" + ], + [ + "gene_synonym", + "astC" + ], + [ + "gene_synonym", + "b1748" + ], + [ + "gene_synonym", + "cstC" + ], + [ + "gene_synonym", + "ydjW" + ] + ], + "dna_sequence": "ATGTCTCAGCCAATTACGCGTGAAAACTTTGATGAATGGATGATACCTGTTTACGCTCCGGCACCCTTTATACCGGTACGTGGCGAAGGTTCGCGCTTGTGGGATCAGCAGGGGAAAGAGTATATCGACTTCGCGGGTGGCATTGCGGTGAACGCGCTGGGCCATGCGCATCCGGAACTGCGTGAAGCGCTGAACGAACAGGCGAGTAAGTTCTGGCATACCGGCAACGGTTACACCAACGAGCCGGTACTGCGACTGGCGAAAAAATTGATCGACGCCACGTTTGCCGATCGCGTCTTCTTTTGTAACTCCGGTGCGGAAGCCAACGAAGCGGCGCTAAAACTGGCGCGTAAATTCGCTCACGACCGCTACGGCAGCCATAAGAGCGGCATCGTGGCGTTCAAAAATGCGTTTCATGGTCGCACGCTGTTTACTGTCAGTGCGGGTGGGCAGCCAGCCTATTCACAGGATTTTGCGCCACTGCCGGCGGATATTCGTCATGCTGCATATAACGATATTAACTCTGCCAGCGCGCTGATTGACGACTCTACCTGTGCGGTGATTGTCGAACCCATCCAGGGGGAAGGCGGTGTGGTGCCAGCCAGCAACGCGTTTTTACAAGGTCTGCGTGAATTGTGTAACCGCCACAATGCGCTGTTGATTTTTGATGAAGTACAAACCGGCGTCGGGCGCACCGGGGAACTGTATGCCTATATGCACTACGGCGTGACGCCTGATCTGTTAACTACCGCCAAAGCGCTGGGCGGCGGTTTCCCGGTCGGTGCGTTGTTGGCAACCGAAGAGTGCGCCCGCGTGATGACCGTTGGCACTCATGGCACCACCTATGGCGGTAATCCGCTGGCCTCGGCGGTGGCAGGCAAAGTGCTGGAGCTCATCAACACACCAGAGATGCTTAATGGCGTTAAACAGCGTCACGACTGGTTTGTTGAGCGTCTTAATACTATTAATCACCGCTATGGTTTGTTCAGTGAAGTTCGCGGCTTAGGTTTGCTGATTGGCTGTGTACTGAATGCCGATTACGCCGGGCAAGCGAAACAGATCTCTCAGGAAGCGGCGAAAGCAGGCGTGATGGTACTGATTGCGGGTGGCAACGTGGTGCGTTTTGCGCCTGCGCTCAATGTCAGCGAAGAAGAGGTGACGACCGGACTGGATCGCTTTGCAGCTGCTTGCGAACACTTTGTTAGCCGAGGTTCATCATGA", + "dna_sequence_length": 1221, + "functions": [ + "succinylornithine transaminase, PLP-dependent" + ], + "id": "CDS_1737", + "location": [ + [ + "NC_000913", + 1831982, + "-", + 1221 + ] + ], + "md5": "322996cc14b0603f1696874473099e75", + "parent_gene": "", + "protein_md5": "1b99953e089adb16509bf02085e6ee79", + "protein_translation": "MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005829" + ], + [ + "gene_synonym", + "ECK1747" + ], + [ + "gene_synonym", + "EcoGene:EG11073" + ], + [ + "gene_synonym", + "GI:16129703" + ], + [ + "gene_synonym", + "GeneID:946254" + ], + [ + "gene_synonym", + "JW1738" + ], + [ + "gene_synonym", + "NP_416263.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09030" + ], + [ + "gene_synonym", + "b1749" + ], + [ + "gene_synonym", + "xth" + ], + [ + "gene_synonym", + "xthA" + ] + ], + "dna_sequence": "ATGAAATTTGTCTCTTTTAATATCAACGGCCTGCGCGCCAGACCTCACCAGCTTGAAGCCATCGTCGAAAAGCACCAACCGGATGTGATTGGCCTGCAGGAGACAAAAGTTCATGACGATATGTTTCCGCTCGAAGAGGTGGCGAAGCTCGGCTACAACGTGTTTTATCACGGGCAGAAAGGCCATTATGGCGTGGCGCTGCTGACCAAAGAGACGCCGATTGCCGTGCGTCGCGGCTTTCCCGGTGACGACGAAGAGGCGCAGCGGCGGATTATTATGGCGGAAATCCCCTCACTGCTGGGTAATGTCACCGTGATCAACGGTTACTTCCCGCAGGGTGAAAGCCGCGACCATCCGATAAAATTCCCGGCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAACCGAACTCAAACGTGATAATCCGGTACTGATTATGGGCGATATGAATATCAGCCCTACAGATCTGGATATCGGCATTGGCGAAGAAAACCGTAAGCGCTGGCTGCGTACCGGTAAATGCTCTTTCCTGCCGGAAGAGCGCGAATGGATGGACAGGCTGATGAGCTGGGGGTTGGTCGATACCTTCCGCCATGCGAATCCGCAAACAGCAGATCGTTTCTCATGGTTTGATTACCGCTCAAAAGGTTTTGACGATAACCGTGGTCTGCGCATCGACCTGCTGCTCGCCAGCCAACCGCTGGCAGAATGTTGCGTAGAAACCGGCATCGACTATGAAATCCGCAGCATGGAAAAACCGTCCGATCACGCCCCCGTCTGGGCGACCTTCCGCCGCTAA", + "dna_sequence_length": 807, + "functions": [ + "exonuclease III" + ], + "id": "CDS_1738", + "location": [ + [ + "NC_000913", + 1832428, + "+", + 807 + ] + ], + "md5": "4ac742f68154e6d46d3fa9ceba61070d", + "parent_gene": "", + "protein_md5": "afb5765c5d4f554c52bed11f02153167", + "protein_translation": "MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005832" + ], + [ + "gene_synonym", + "ECK1748" + ], + [ + "gene_synonym", + "EcoGene:EG14000" + ], + [ + "gene_synonym", + "GI:90111321" + ], + [ + "gene_synonym", + "GeneID:946250" + ], + [ + "gene_synonym", + "JW1739" + ], + [ + "gene_synonym", + "NP_416264.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76219" + ], + [ + "gene_synonym", + "b1750" + ], + [ + "gene_synonym", + "ydjX" + ] + ], + "dna_sequence": "ATGAACGCTGAGCGTAAATTTCTTTTTGCCTGTCTTATTTTTGCGCTGGTCATTTACGCTATCCACGCTTTCGGTTTATTCGATCTGCTCACCGATTTACCCCACTTACAGACACTCATCCGCCAGAGCGGATTTTTCGGCTATAGCCTCTATATTCTGTTATTCATCATTGCCACCCTCTTGCTGTTACCAGGAAGCATACTGGTGATCGCGGGAGGAATAGTTTTTGGCCCGCTCTTAGGGACACTACTCTCATTAATTGCCGCCACGCTGGCCTCCTCGTGCTCATTCCTGCTGGCGCGCTGGCTGGGACGTGATTTACTGCTGAAATACGTTGGCCATAGCAATACCTTCCAGGCCATTGAAAAAGGCATTGCGCGTAACGGTATTGATTTTCTTATTCTGACCCGCTTAATCCCGTTGTTTCCTTACAATATTCAAAATTACGCTTACGGATTAACCACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAG", + "dna_sequence_length": 711, + "functions": [ + "TVP38/TMEM64 family inner membrane protein" + ], + "id": "CDS_1739", + "location": [ + [ + "NC_000913", + 1833401, + "+", + 711 + ] + ], + "md5": "db9a52835de75ca7691e5be633c9d90e", + "parent_gene": "", + "protein_md5": "05f3752d12267af8cdcca90e672ff82c", + "protein_translation": "MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKNEG", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005834" + ], + [ + "gene_synonym", + "ECK1749" + ], + [ + "gene_synonym", + "EcoGene:EG14001" + ], + [ + "gene_synonym", + "GI:90111322" + ], + [ + "gene_synonym", + "GeneID:946248" + ], + [ + "gene_synonym", + "JW5283" + ], + [ + "gene_synonym", + "NP_416265.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76220" + ], + [ + "gene_synonym", + "b1751" + ], + [ + "gene_synonym", + "ydjY" + ] + ], + "dna_sequence": "ATGTTGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGTTTACTGGCTGTTGCTGGGCTTAGCGGCTGCGATCAACAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGTGTCGATGCCAATAACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGATGGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGGTACGCCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGATATTTCGGTCAACTGGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGCGGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAATGCAACATACACTTATGGTGCGGTTGAAAAACGTGGTGAAGTTAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAA", + "dna_sequence_length": 678, + "functions": [ + "putative ferrodoxin-like lipoprotein" + ], + "id": "CDS_1740", + "location": [ + [ + "NC_000913", + 1834116, + "+", + 678 + ] + ], + "md5": "905e9b5612040fd5997bbf0a588eb314", + "parent_gene": "", + "protein_md5": "107d58b4f4d7b6c03385c527404cb005", + "protein_translation": "MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005837" + ], + [ + "gene_synonym", + "ECK1750" + ], + [ + "gene_synonym", + "EcoGene:EG14002" + ], + [ + "gene_synonym", + "GI:16129706" + ], + [ + "gene_synonym", + "GeneID:946269" + ], + [ + "gene_synonym", + "JW1741" + ], + [ + "gene_synonym", + "NP_416266.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76221" + ], + [ + "gene_synonym", + "b1752" + ], + [ + "gene_synonym", + "ydjZ" + ] + ], + "dna_sequence": "ATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCGGCGTCCATGAGTTTATCAATCGCAGCGTTGCGGCGTTTGCCGCCGTGGACCAACAGGGTATAGAACGCTTTATTCAGTCTTACGGCGCACTGGCGGCAGTTGTCTCGTTCTTGTTGATGATTTTGCAGGCCATTGCTGCACCGCTACCTGCGTTTTTGATCACCTTTGCCAATGCGTCGCTGTTTGGCGCGTTCTGGGGCGGCTTGCTGTCGTGGACCAGTTCGATGGCCGGCGCGGCGCTGTGCTTTTTTATCGCCAGAGTGATGGGCCGCGAAGTGGTGGAAAAATTAACCGGCAAAACCGTGCTTGACAGTATGGACGGCTTTTTCACTCGCTACGGCAAACACACCATTCTGGTCTGTCGGTTATTGCCTTTTGTCCCTTTCGATCCAATCAGCTATGCTGCCGGTTTGACTTCAATACGTTTTCGCTCGTTTTTTATCGCCACCGGGCTTGGTCAGTTACCGGCAACTATTGTTTATTCCTGGGCGGGCAGCATGTTAACAGGCGGTACTTTCTGGTTTGTCACCGGACTGTTTATTCTGTTTGCCCTGACCGTGGTGATTTTTATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGA", + "dna_sequence_length": 708, + "functions": [ + "TVP38/TMEM64 family inner membrane protein" + ], + "id": "CDS_1741", + "location": [ + [ + "NC_000913", + 1834808, + "+", + 708 + ] + ], + "md5": "4139c89c07d77edc072bcccdfa1bf50a", + "parent_gene": "", + "protein_md5": "f3a0de9cbf2215b2acf43cbdd96fbcd5", + "protein_translation": "MMMMQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005839" + ], + [ + "gene_synonym", + "ECK1751" + ], + [ + "gene_synonym", + "EcoGene:EG14003" + ], + [ + "gene_synonym", + "GI:16129707" + ], + [ + "gene_synonym", + "GeneID:946270" + ], + [ + "gene_synonym", + "JW1742" + ], + [ + "gene_synonym", + "NP_416267.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76222" + ], + [ + "gene_synonym", + "b1753" + ], + [ + "gene_synonym", + "ynjA" + ] + ], + "dna_sequence": "ATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAGCGCGCGCATTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAA", + "dna_sequence_length": 549, + "functions": [ + "carboxymuconolactone decarboxylase family protein" + ], + "id": "CDS_1742", + "location": [ + [ + "NC_000913", + 1835515, + "+", + 549 + ] + ], + "md5": "e2eb9a3bbd3bc994787dd1d83f216dfe", + "parent_gene": "", + "protein_md5": "641300ae470669096f53e556a4003f65", + "protein_translation": "MGLPPLSKIPLILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSSDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEKRS", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005841" + ], + [ + "gene_synonym", + "ECK1752" + ], + [ + "gene_synonym", + "EcoGene:EG14004" + ], + [ + "gene_synonym", + "GI:90111323" + ], + [ + "gene_synonym", + "GeneID:946271" + ], + [ + "gene_synonym", + "JW5284" + ], + [ + "gene_synonym", + "NP_416268.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76223" + ], + [ + "gene_synonym", + "b1754" + ], + [ + "gene_synonym", + "ynjB" + ] + ], + "dna_sequence": "ATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCTATAAACCTGAAGATTGTCCGTCTGGCGGATGCCGCAGACGCGGTGAAGCGCATTCAGACCGAAGCCGCAGCCGGACGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGCGAAAACTTCCGCACCTTAAAAGAGGCCAATTTATTACAAACGGGCTGGGCGGAGACTCTGCCCAACTGGCGCTATGTCGACACACAGCTGCCGGTGCGGGAAGATTTTTCTGTGCCGACACAAGGTGCGGAATCGCCCTGGGGCGGCGCACAACTGACGTTTATCGCCCGCCGCGATGTTACGCCACAGCCACCACAAACGCCGCAAGCCTTACTGGAGTTTGCTAAAGCCAATCCCGGCACGGTTACCTATCCGCGCCCACCGGACTTTACCGGCACGGCGTTTCTTGAACAGTTGCTGATTATGCTGACGCCCGATCCCGCCGCATTAAAAGAAGCGCCGGACGATGCGACTTTCGCCCGTGTCACTGCTCCCTTGTGGCAATATCTTGATGTGCTGCATCCGTATTTGTGGCGCGAAGGAAAGGATTTCCCGCCTTCACCCGCGCGGATGGATGCTCTGCTGAAAGCCGGCACATTGCGCCTGTCGCTGACCTTTAACCCCGCGCATGCGCAGCAAAAAATCGCCAGCGGCGATTTGCCTGCAAGCAGTTACAGTTTTGGCTTTCGCGAGGGGATGATTGGCAACGTGCATTTCGTCACCATTCCTGCCAACGCGAATGCCAGTGCTGCGGCGAAGGTAGTTGCCAATTTCCTGCTCTCACCCGATGCGCAACTGCGTAAAGCAGATCCCGCTGTCTGGGGCGATCCTTCTGTTCTCGATCCGCAAAAACTGCCTGACGGGCAGCGCGAATCATTGCAATCAAGAATGCCGCAGGATCTGCCGCCGGTACTGGCTGAACCGCACGCAGGTTGGGTAAATGCGCTGGAACAAGAATGGCTACACCGTTACGGTACGCATTAA", + "dna_sequence_length": 1167, + "functions": [ + "putative ABC transporter periplasmic binding protein" + ], + "id": "CDS_1743", + "location": [ + [ + "NC_000913", + 1836073, + "+", + 1167 + ] + ], + "md5": "643e73e7df693766344ae7742fdbc532", + "parent_gene": "", + "protein_md5": "24cd8247be640d2cd90e0b61801af68f", + "protein_translation": "MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005843" + ], + [ + "gene_synonym", + "ECK1753" + ], + [ + "gene_synonym", + "EcoGene:EG14005" + ], + [ + "gene_synonym", + "GI:145698277" + ], + [ + "gene_synonym", + "GeneID:946273" + ], + [ + "gene_synonym", + "JW5285" + ], + [ + "gene_synonym", + "NP_416269.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76224" + ], + [ + "gene_synonym", + "b1755" + ], + [ + "gene_synonym", + "ynjC" + ] + ], + "dna_sequence": "ATGGCTACACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCTCACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGCGGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGCTGTGGCCTGGGCCGAAATGGCAGCGTATGTGCGCCCGTCTGCCGTGGCTGCTCGCCATTCCCCATGTGGCTTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAAAATGGCTGTTGCAGCAGGTCATTGTGCTGGATTCGCTGGGCTACAGCCGCTGGCAATGCCTGAACTGGCTGCTGTTGCCCTCCGTCGCGCCTGCGCTGGCAATGGCGATGCTGGCGATTGTTGCCTGGTCGCTGTCGGTCGTGGATGTGGCAATTATTCTCGGGCCAGGTAATCCCCCGACGCTGGCGGTAATTAGCTGGCAGTGGTTAACCCAGGGCGACATTGACCAACAAACAAAAGGCGCGCTTGCCAGCCTGCTGTTGATGCTGTTACTCGCCGCCTACGTTTTGCTGAGCTATCTGCTATGGCGCAGCTGGCGGCGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTCGACGATCAATAGTGAAGCGCTCATCAACAGCCTGACAATGGGGCTGGTGGCGACATTCATCGCTTTGCTCCTGTTACTGCTGTGGCTGGAATGGGGGCCACAGCGTCGCCAGTTGTGGCTATGGTTGCCCATTTTATTACCTGCTCTGCCACTGGTGGCGGGCCAGTACACGCTGGCGCTATGGCTGAAACTGGATGGAAGCTGGACGGCGGTGGTCTGGGGGCATCTGCTGTGGGTGATGCCGTGGATGCTGTTTATCCTGCAACCCGCCTGGCAGCGCATTGATTCACGGTTAATTTTGATTGCGCAAACACTGGGCTGGTCGCGGGCCAAAATCTTCTTTTACGTGAAATGCCCACTCATGTTGCGCCCTGTGCTGATTGCCTTCGCGGTGGGATTTGCAGTCGGTATTGCGCAGTATATGCCAACGCTGTGGCTGGGCGCGGGGCGTTTTCCGACGCTCACCACTGAGGCGGTGGCATTAAGCAGCGGCGGCAGCAACGGTATTCTCGCCGCCCAGGCTTTATGGCAACTGCTATTACCGCTTATTATTTTTGCCCTGACCGCGTTAGTCGCAAAATGGGTAGGTTATGTCAGACAAGGACTCCGCTAA", + "dna_sequence_length": 1536, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_1744", + "location": [ + [ + "NC_000913", + 1837212, + "+", + 1536 + ] + ], + "md5": "cf053d008b7cb65d3e2d98c008894135", + "parent_gene": "", + "protein_md5": "f49c64015e3c7662c0c66c4badc25f63", + "protein_translation": "MATPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKWLLQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDIDQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKPATPLLPGNTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLKLDGSWTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFAVGIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWVGYVRQGLR", + "protein_translation_length": 511, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005845" + ], + [ + "gene_synonym", + "ECK1754" + ], + [ + "gene_synonym", + "EcoGene:EG14006" + ], + [ + "gene_synonym", + "GI:16129710" + ], + [ + "gene_synonym", + "GeneID:944965" + ], + [ + "gene_synonym", + "JW5286" + ], + [ + "gene_synonym", + "NP_416270.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76909" + ], + [ + "gene_synonym", + "b1756" + ], + [ + "gene_synonym", + "ynjD" + ] + ], + "dna_sequence": "ATGCTCTGCGTGAAAAATGTTTCGCTACGTTTACCAGAAAGCCGCTTGCTGACAAACGTTAACTTTACGGTGGATAAAGGTGACATTGTCACGTTAATGGGGCCGTCTGGCTGTGGAAAATCCACTCTGTTTTCATGGATGATTGGTGCACTGGCCGAACAGTTTTCTTGTACAGGTGAGCTATGGCTCAATGAGCAACGGATTGACATCCTACCCACCGCACAGCGTCAGATTGGCATTCTTTTTCAGGATGCACTGTTATTTGACCAGTTCAGTGTCGGGCAAAATTTACTGCTGGCGCTACCGGCGACACTTAAAGGGAATGCCCGACGTAATGCCGTGAATGATGCACTTGAGCGTTCAGGCCTTGAGGGAGCTTTCCATCAGGATCCTGCCACTTTGTCTGGCGGTCAGCGAGCGCGCGTTGCTCTACTACGCGCCCTTCTCGCCCAACCAAAAGCGTTACTCCTGGATGAGCCATTCAGCCGTCTTGATGTGGCTCTGCGCGATAATTTTCGCCAGTGGGTGTTCAGCGAAGTTCGCGCCCTGGCGATCCCCGTCGTTCAGGTAACGCACGATCTCCAGGATGTTCCTGCTGATAGTTCTGTTCTGGATATGGCGCAGTGGTCAGAAAATTACAACAAACTGCGATAA", + "dna_sequence_length": 654, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_1745", + "location": [ + [ + "NC_000913", + 1838747, + "+", + 654 + ] + ], + "md5": "804bd673b4c32fbe8fba0be79b73745f", + "parent_gene": "", + "protein_md5": "193a16e82d36d00006825dbeb6d1dba4", + "protein_translation": "MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQNLLLALPATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005848" + ], + [ + "gene_synonym", + "ECK1755" + ], + [ + "gene_synonym", + "EcoGene:EG14007" + ], + [ + "gene_synonym", + "GI:90111324" + ], + [ + "gene_synonym", + "GeneID:946505" + ], + [ + "gene_synonym", + "JW5287" + ], + [ + "gene_synonym", + "NP_416271.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78067" + ], + [ + "gene_synonym", + "b1757" + ], + [ + "gene_synonym", + "ynjE" + ] + ], + "dna_sequence": "ATGAAACGTGTTTCTCAAATGACCGCGCTGGCAATGGCTTTAGGGCTGGCTTGCGCTTCTTCGTGGGCCGCTGAACTGGCGAAGCCTCTTACACTTGACCAGCTTCAACAACAAAATGGCAAAGCGATAGATACTCGCCCCAGCGCGTTTTATAACGGCTGGCCACAAACCTTAAATGGCCCTTCTGGTCATGAACTTGCCGCCTTAAACCTCTCTGCCAGCTGGCTTGACAAAATGAGCACCGAACAGCTCAACGCGTGGATCAAGCAACATAACCTGAAAACCGATGCTCCGGTGGCGCTGTACGGTAATGACAAAGATGTCGACGCCGTCAAAACGCGACTGCAAAAAGCAGGTTTAACGCATATCTCCATCCTGAGTGACGCGCTAAGCGAACCTTCCCGTCTGCAAAAACTGCCGCATTTTGAGCAGCTGGTTTATCCGCAATGGCTGCACGACCTGCAACAAGGTAAAGAGGTTACGGCGAAACCTGCCGGTGACTGGAAAGTCATTGAAGCGGCCTGGGGCGCTCCTAAGCTTTACCTTATCAGCCATATTCCCGGCGCTGACTACATCGATACCAACGAAGTGGAAAGTGAACCGCTGTGGAACAAAGTTTCTGATGAACAACTAAAAGCGATGCTGGCAAAACACGGCATTCGCCATGACACCACGGTCATTCTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAA", + "dna_sequence_length": 1308, + "functions": [ + "molybdopterin synthase sulfurtransferase" + ], + "id": "CDS_1746", + "location": [ + [ + "NC_000913", + 1839467, + "+", + 1308 + ] + ], + "md5": "77c1e46a8fe029c7a491ed9f2af49c2c", + "parent_gene": "", + "protein_md5": "c893794ff41082ba94584f795169055c", + "protein_translation": "MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK", + "protein_translation_length": 435, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005850" + ], + [ + "gene_synonym", + "ECK1756" + ], + [ + "gene_synonym", + "EcoGene:EG14008" + ], + [ + "gene_synonym", + "GI:90111325" + ], + [ + "gene_synonym", + "GeneID:946221" + ], + [ + "gene_synonym", + "JW1747" + ], + [ + "gene_synonym", + "NP_416272.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76226" + ], + [ + "gene_synonym", + "b1758" + ], + [ + "gene_synonym", + "ynjF" + ] + ], + "dna_sequence": "GTGCTAGACCGCCATCTTCATCCCCGGATTAAACCGTTGTTGCATCAGTGCGTGCGGGTTCTTGATAAACCGGGCATTACGCCAGATGGTTTAACATTAGTGGGATTTGCCATCGGCGTGCTGGCTCTGCCGTTTCTGGCGCTGGGCTGGTATCTGGCGGCGCTAGTCGTCATTTTGTTGAACAGGCTGCTTGATGGTCTGGACGGTGCGCTGGCGCGGCGCAGAGAGCTTACCGACGCGGGCGGCTTTCTTGATATTTCTCTCGATTTTCTCTTTTACGCGCTGGTGCCGTTTGGCTTTATTCTTGCTGCACCGGAGCAAAATGCGCTGGCAGGCGGCTGGTTGTTGTTTGCGTTTATCGGCACGGGCAGCAGTTTTCTCGCCTTTGCTGCACTGGCAGCAAAACATCAGATTGATAACCCCGGTTATGCACATAAGTCGTTTTACTATCTGGGGGGATTAACCGAAGGCACAGAAACGATCTTACTGTTTGTGCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGACCTTTACGCGGGTGTGGAGTGGGTATCTGACGCTGAAGTCGCTCCAGCGTCAGTAA", + "dna_sequence_length": 621, + "functions": [ + "CDP-alcohol phosphatidyltransferase family inner membrane protein" + ], + "id": "CDS_1747", + "location": [ + [ + "NC_000913", + 1841403, + "-", + 621 + ] + ], + "md5": "eda514aaa066f5c24dc70eeb29420c99", + "parent_gene": "", + "protein_md5": "6e3abafda766d308c0f1db9ded7e5714", + "protein_translation": "MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005855" + ], + [ + "gene_synonym", + "ECK1757" + ], + [ + "gene_synonym", + "EcoGene:EG14009" + ], + [ + "gene_synonym", + "GI:16129713" + ], + [ + "gene_synonym", + "GeneID:946277" + ], + [ + "gene_synonym", + "JW1748" + ], + [ + "gene_synonym", + "NP_416273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77788" + ], + [ + "gene_synonym", + "b1759" + ], + [ + "gene_synonym", + "nudG" + ], + [ + "gene_synonym", + "orf135" + ], + [ + "gene_synonym", + "ynjG" + ] + ], + "dna_sequence": "ATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAACGCCCCGCCCAGAGCGATCAGGCGGGATTATGGGAGTTTGCCGGTGGTAAAGTCGAGCCGGATGAAAGTCAGCGGCAGGCGCTGGTGCGTGAGTTACGCGAAGAACTGGGCATCGAAGCAACTGTGGGTGAATATGTTGCCAGCCATCAGCGAGAAGTTTCGGGGCGGATTATCCATCTTCATGCCTGGCACGTACCCGACTTCCACGGGACGTTACAGGCACATGAACATCAGGCGCTGGTCTGGTGCTCACCTGAAGAGGCGCTGCAATATCCGCTGGCCCCTGCTGACATTCCATTATTAGAGGCGTTTATGGCTTTACGCGCCGCCAGACCAGCGGATTAG", + "dna_sequence_length": 408, + "functions": [ + "CTP pyrophosphohydrolase", + "also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP" + ], + "id": "CDS_1748", + "location": [ + [ + "NC_000913", + 1841490, + "+", + 408 + ] + ], + "md5": "b4955c8e55d26f39075a6871c824292d", + "parent_gene": "", + "protein_md5": "3615410c0dcb65f92791e942145bfee2", + "protein_translation": "MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMALRAARPAD", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005858" + ], + [ + "gene_synonym", + "ECK1758" + ], + [ + "gene_synonym", + "EcoGene:EG14010" + ], + [ + "gene_synonym", + "GI:16129714" + ], + [ + "gene_synonym", + "GeneID:946279" + ], + [ + "gene_synonym", + "JW1749" + ], + [ + "gene_synonym", + "NP_416274.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76227" + ], + [ + "gene_synonym", + "b1760" + ], + [ + "gene_synonym", + "ynjH" + ] + ], + "dna_sequence": "GTGAGTCGAGCATTGTTCGCCGTAGTATTAGCATTTCCATTAATTGCACTGGCTAACCCGCATTATCGTCCGGACGTGGAGGTAAACGTACCGCCAGAAGTGTTCAGTTCAGGCGGGCAGTCAGCGCAGCCCTGTACTCAGTGCTGCGTTTATCAGGATCAAAATTATTCTGAAGGGGCGGTAATTAAAGCCGAAGGAATACTGCTGCAATGCCAGCGTGATGACAAAACCCTTAGCACTAATCCGCTGGTCTGGCGGCGCGTAAAGCCATAA", + "dna_sequence_length": 273, + "functions": [ + "DUF1496 family protein" + ], + "id": "CDS_1749", + "location": [ + [ + "NC_000913", + 1842135, + "-", + 273 + ] + ], + "md5": "6eb7ec0d9b18d8888386c2e6898bd862", + "parent_gene": "", + "protein_md5": "47b472a80816e3ee4e15e76332c1dc04", + "protein_translation": "MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005865" + ], + [ + "gene_synonym", + "ECK1759" + ], + [ + "gene_synonym", + "EcoGene:EG10372" + ], + [ + "gene_synonym", + "GI:16129715" + ], + [ + "gene_synonym", + "GeneID:946802" + ], + [ + "gene_synonym", + "JW1750" + ], + [ + "gene_synonym", + "NP_416275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00370" + ], + [ + "gene_synonym", + "b1761" + ], + [ + "gene_synonym", + "gdhA" + ] + ], + "dna_sequence": "ATGGATCAGACATATTCTCTGGAGTCATTCCTCAACCATGTCCAAAAGCGCGACCCGAATCAAACCGAGTTCGCGCAAGCCGTTCGTGAAGTAATGACCACACTCTGGCCTTTTCTTGAACAAAATCCAAAATATCGCCAGATGTCATTACTGGAGCGTCTGGTTGAACCGGAGCGCGTGATCCAGTTTCGCGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAA", + "dna_sequence_length": 1344, + "functions": [ + "glutamate dehydrogenase, NADP-specific" + ], + "id": "CDS_1750", + "location": [ + [ + "NC_000913", + 1842371, + "+", + 1344 + ] + ], + "md5": "dcf31e5b55a47e1f44f6a987c458029c", + "parent_gene": "", + "protein_md5": "9ec8e26fcf5c160f533bf9a69dec0212", + "protein_translation": "MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQIQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005867" + ], + [ + "gene_synonym", + "ECK1760" + ], + [ + "gene_synonym", + "EcoGene:EG14011" + ], + [ + "gene_synonym", + "GI:90111326" + ], + [ + "gene_synonym", + "GeneID:946239" + ], + [ + "gene_synonym", + "JW5288" + ], + [ + "gene_synonym", + "NP_416276.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76228" + ], + [ + "gene_synonym", + "b1762" + ], + [ + "gene_synonym", + "ynjI" + ] + ], + "dna_sequence": "ATGAAAAAAGTTTTATTACAAAACCATCCTGGGAGCGAGAAGTATTCTTTTAATGGCTGGGAAATATTTAATAGTAATTTTGAACGGATGATTAAAGAAAATAAGGCCATGCTGCTTTGTAAGTGGGGGTTTTATTTAACATGTGTTGTCGCTGTAATGTTTGTGTTCGCAGCGATAACATCCAACGGTTTGAATGAAAGAGGCCTGATTACCGCGGGATGCTCTTTTCTTTATCTATTAATTATGATGGGGCTTATTGTTCGGGCCGGTTTTAAAGCAAAAAAAGAACAACTGCATTATTATCAGGCTAAAGGTATTGAGCCGCTCAGTATCGAGAAGTTACAGGCGCTACAATTGATCGCACCTTATCGATTCTATCATAAGCAATGGTCTGAAACGCTGGAGTTCTGGCCGCGAAAGCCTGAACCTGGCAAAGATACCTTCCAATATCATGTGCTTCCTTTTGACTCGATCGATATCATAAGTAAAAGACGCGAGTCTTTAGAGGATCAATGGGGTATCGAAGATAGCGAAAGTTATTGTGCCTTAATGGAGCATTTTCTTTCTGGCGACCATGGAGCCAATACCTTTAAAGCAAACATGGAGGAAGCCCCAGAGCAGGTTATCGCCTTGTTGAATAAATTTGCTGTTTTTCCCTCAGACTATATCTCTGATTGCGCTAATCATAGCTCCGGTAAATCCTCGGCGAAGCTAATATGGGCGGCGGAATTATCATGGATGATCTCGATATCAAGCACAGCTTTTCAAAACGGGACAATTGAAGAAGAACTGGCCTGGCATTATATAATGCTTGCTTCTCGAAAGGCGCACGAGTTGTTCGAAAGCGAAGAAGATTATCAAAAAAATAGTCAAATGGGATTTCTTTACTGGCATATCTGCTGCTATCGCAGAAAGTTAACGGATGCTGAACTTGAAGCGTGTTATCGTTACGACAAGCAGTTTTGGGAGCACTACAGTAAGAAATGCCGTTGGCCCATAAGAAATGTTCCGTGGGGAGCATCATCCGTTAAATACTCATAA", + "dna_sequence_length": 1041, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1751", + "location": [ + [ + "NC_000913", + 1844871, + "-", + 1041 + ] + ], + "md5": "543342dabdcd4f013a0b5bf4e7934ee8", + "parent_gene": "", + "protein_md5": "1a304f8fe6709bfdd413db71ca9cfbe4", + "protein_translation": "MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGFYLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLIAPYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDIISKRRESLEDQWGIEDSESYCALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVFPSDYISDCANHSSGKSSAKLIWAAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAHELFESEEDYQKNSQMGFLYWHICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGASSVKYS", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005869" + ], + [ + "gene_synonym", + "ECK1761" + ], + [ + "gene_synonym", + "EcoGene:EG11014" + ], + [ + "gene_synonym", + "GI:16129717" + ], + [ + "gene_synonym", + "GeneID:946141" + ], + [ + "gene_synonym", + "JW1752" + ], + [ + "gene_synonym", + "NP_416277.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14294" + ], + [ + "gene_synonym", + "b1763" + ], + [ + "gene_synonym", + "mutR" + ], + [ + "gene_synonym", + "topB" + ] + ], + "dna_sequence": "ATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTAATGGTCAGGTGGTGACCTGGTGTATCGGTCACCTGCTTGAGCAGGCGCAGCCAGACGCCTACGACAGCCGCTATGCGCGCTGGAATCTTGCGGATTTGCCGATTGTCCCGGAAAAGTGGCAATTACAGCCCCGACCCTCCGTGACCAAACAACTTAACGTCATCAAACGGTTCCTGCATGAAGCCAGCGAAATCGTTCACGCCGGGGACCCGGATCGTGAAGGGCAATTGCTGGTGGATGAAGTGCTGGACTATCTGCAACTGGCACCGGAAAAGCGCCAGCAGGTACAGCGTTGCTTGATAAACGACCTGAACCCGCAGGCGGTTGAGCGGGCGATCGACCGTCTTCGTTCCAACAGTGAGTTTGTACCGCTGTGCGTTTCTGCGCTGGCGCGAGCGCGTGCCGACTGGCTGTACGGCATCAATATGACCCGTGCGTATACCATTCTCGGTCGCAATGCCGGTTATCAGGGCGTACTTTCCGTGGGACGCGTGCAGACGCCCGTGCTTGGGCTGGTGGTGCGCCGCGATGAAGAGATTGAAAACTTCGTGGCGAAAGACTTCTTTGAAGTCAAAGCACATATCGTGACACCTGCCGATGAGCGGTTTACCGCTATCTGGCAACCGAGCGAAGCGTGTGAACCGTACCAGGATGAAGAAGGGCGCTTGTTACATCGTCCACTGGCGGAGCATGTGGTTAACCGCATTAGTGGTCAACCGGCTATTGTCACCAGCTATAACGATAAACGGGAATCAGAATCCGCGCCGCTGCCTTTTTCGCTTTCAGCGTTGCAGATTGAAGCGGCAAAACGTTTTGGTCTGAGTGCGCAGAACGTGCTTGATATCTGCCAGAAACTGTACGAAACGCACAAGCTAATCACTTATCCGCGTTCTGATTGTCGCTATTTGCCAGAAGAACATTTTGCCGGACGCCACGCGGTGATGAATGCCATCAGTGTTCATGCACCGGATCTGTTGCCGCAGCCAGTGGTAGATCCAGATATACGCAACCGCTGTTGGGATGACAAAAAGGTCGATGCGCACCACGCCATCATTCCGACCGCACGGAGTTCTGCGATCAACCTGACGGAGAACGAAGCGAAGGTCTATAACCTGATTGCCCGTCAGTATCTGATGCAATTCTGCCCGGATGCGGTGTTCCGCAAGTGTGTTATCGAACTGGACATTGCCAAAGGCAAATTTGTCGCTAAAGCGCGTTTTCTTGCTGAAGCAGGCTGGCGCACGCTGTTAGGCAGCAAAGAGCGCGATGAAGAAAACGACGGCACGCCACTGCCTGTGGTGGCGAAAGGCGATGAGTTGCTGTGTGAAAAAGGTGAAGTGGTAGAGCGGCAAACCCAGCCGCCGCGCCATTTTACCGATGCAACACTGCTTTCGGCGATGACCGGGATCGCGCGCTTTGTGCAGGATAAAGATCTGAAAAAGATCCTCCGTGCGACCGATGGTCTGGGGACAGAGGCAACGCGTGCCGGGATTATTGAACTGTTGTTCAAGCGTGGTTTCCTGACCAAAAAAGGGCGCTATATCCACTCCACCGACGCCGGAAAAGCGCTATTCCATTCGCTGCCGGAGATGGCGACGCGACCGGACATGACCGCGCACTGGGAATCGGTGCTGACGCAAATCAGCGAAAAGCAGTGTCGCTATCAGGACTTTATGCAGCCGCTGGTGGGGACGCTATATCAGCTTATTGATCAAGCCAAACGTACGCCGGTGCGGCAGTTTCGCGGCATTGTGGCTCCGGGCAGTGGTGGCAGTGCTGATAAGAAAAAGGCTGCACCGCGTAAACGTAGTGCGAAAAAAAGTCCGCCAGCAGATGAAGTCGGAAGCGGGGCGATAGCGTAA", + "dna_sequence_length": 1962, + "functions": [ + "DNA topoisomerase III" + ], + "id": "CDS_1752", + "location": [ + [ + "NC_000913", + 1846960, + "-", + 1962 + ] + ], + "md5": "c77b0e2e6e967403ef6a4035ad4e1493", + "parent_gene": "", + "protein_md5": "9c398b236aac30be7e202dcd1dfd3a2a", + "protein_translation": "MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIA", + "protein_translation_length": 653, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005872" + ], + [ + "gene_synonym", + "ECK1762" + ], + [ + "gene_synonym", + "EcoGene:EG10943" + ], + [ + "gene_synonym", + "GI:16129718" + ], + [ + "gene_synonym", + "GeneID:946768" + ], + [ + "gene_synonym", + "JW1753" + ], + [ + "gene_synonym", + "NP_416278.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16456" + ], + [ + "gene_synonym", + "b1764" + ], + [ + "gene_synonym", + "fdhB" + ], + [ + "gene_synonym", + "selD" + ] + ], + "dna_sequence": "ATGAGCGAGAACTCGATTCGTTTGACCCAATACAGCCACGGAGCTGGTTGCGGCTGTAAAATTTCCCCAAAAGTGTTGGAAACCATCCTGCATAGTGAGCAGGCGAAGTTTGTTGATCCGAATTTGCTTGTGGGTAATGAAACCCGCGACGATGCGGCGGTGTACGATCTGGGCAATGGCACCAGCGTTATCAGTACCACCGACTTCTTTATGCCGATCGTTGATAATCCTTTCGATTTTGGCCGCATTGCGGCGACTAACGCCATCAGCGATATCTTCGCGATGGGGGGCAAACCGATTATGGCGATTGCGATCCTCGGCTGGCCGATTAACAAACTTTCCCCAGAAATTGCCCGCGAAGTGACCGAAGGTGGACGCTATGCATGTCGTCAGGCGGGTATTGCGCTGGCTGGCGGTCACTCCATCGATGCGCCGGAGCCGATTTTTGGTCTGGCGGTAACGGGGATCGTACCGACCGAGCGGGTGAAGAAAAACAGTACCGCACAAGCCGGATGCAAACTGTTCCTGACGAAACCGCTGGGGATCGGCGTTCTTACCACGGCTGAGAAAAAATCACTGTTGAAACCAGAACATCAGGGACTGGCGACGGAAGTGATGTGCCGGATGAACATCGCAGGCGCGTCCTTTGCCAACATCGAAGGCGTAAAAGCGATGACCGACGTTACGGGCTTTGGTCTGCTGGGCCACTTGAGCGAAATGTGTCAGGGGGCTGGTGTGCAGGCACGCGTCGACTATGAAGCGATCCCGAAACTCCCCGGTGTTGAAGAGTACATTAAGTTGGGCGCAGTACCTGGCGGCACTGAACGTAACTTTGCCAGCTACGGTCATCTGATGGGTGAAATGCCGCGTGAAGTGCGCGATCTGCTGTGTGATCCGCAAACTTCTGGCGGTTTGCTGCTGGCGGTCATGCCGGAAGCAGAAAATGAGGTCAAAGCTACAGCCGCCGAGTTTGGCATTGAACTGACGGCAATTGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAA", + "dna_sequence_length": 1044, + "functions": [ + "selenophosphate synthase" + ], + "id": "CDS_1753", + "location": [ + [ + "NC_000913", + 1848008, + "-", + 1044 + ] + ], + "md5": "4ad06d3abbc6b2dc6090ea21db4163e9", + "parent_gene": "", + "protein_md5": "cafca265a3bf7afba1ec32aea9845b77", + "protein_translation": "MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARGGRAMVEIR", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005875" + ], + [ + "gene_synonym", + "ECK1763" + ], + [ + "gene_synonym", + "EcoGene:EG11134" + ], + [ + "gene_synonym", + "GI:16129719" + ], + [ + "gene_synonym", + "GeneID:945964" + ], + [ + "gene_synonym", + "JW1754" + ], + [ + "gene_synonym", + "NP_416279.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY1" + ], + [ + "gene_synonym", + "b1765" + ], + [ + "gene_synonym", + "ydjA" + ] + ], + "dna_sequence": "ATGGATGCACTCGAACTATTGATCAATCGCCGTAGCGCCTCCCGCTTGGCTGAACCCGCGCCAACGGGTGAACAACTGCAAAACATCCTGCGTGCGGGTATGCGTGCGCCGGACCATAAGTCCATGCAACCGTGGCATTTTTTTGTGATTGAAGGGGAAGGGCGCGAGCGTTTCAGCGCCGTACTGGAACAGGGGGCGATTGCTGCCGGTAGTGATGACAAAGCTATCGACAAAGCCCGTAATGCGCCGTTCCGCGCACCGCTCATCATCACGGTGGTGGCGAAATGCGAAGAGAATCATAAAGTCCCGCGCTGGGAACAGGAAATGTCTGCCGGATGCGCGGTCATGGCGATGCAAATGGCAGCAGTTGCCCAGGGGTTTGGCGGCATCTGGCGCAGTGGCGCATTAACTGAAAGTCCGGTAGTGCGTGAAGCATTCGGTTGCCGTGAGCAGGATAAAATTGTCGGTTTTCTCTACCTCGGTACGCCGCAGCTGAAAGCATCTACGTCGATTAACGTCCCGGACCCGACGCCGTTTGTAACTTATTTCTGA", + "dna_sequence_length": 552, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1754", + "location": [ + [ + "NC_000913", + 1848676, + "-", + 552 + ] + ], + "md5": "c0ffd2e483c09e31c3671340cab0c05e", + "parent_gene": "", + "protein_md5": "e6c1af58a06160fc94e702b4ca64be72", + "protein_translation": "MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFVTYF", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005880" + ], + [ + "gene_synonym", + "ECK1764" + ], + [ + "gene_synonym", + "EcoGene:EG10968" + ], + [ + "gene_synonym", + "GI:16129720" + ], + [ + "gene_synonym", + "GeneID:946281" + ], + [ + "gene_synonym", + "JW1755" + ], + [ + "gene_synonym", + "NP_416280.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08395" + ], + [ + "gene_synonym", + "b1766" + ], + [ + "gene_synonym", + "sppA" + ] + ], + "dna_sequence": "ATGCGAACCCTTTGGCGATTTATTGCCGGATTTTTTAAATGGACGTGGCGTCTGCTGAATTTCGTCCGTGAAATGGTACTTAACCTGTTCTTTATTTTCCTCGTACTGGTTGGTGTGGGGATTTGGATGCAGGTCAGTGGTGGTGATTCGAAAGAAACGGCCAGTCGTGGCGCACTGCTGCTGGACATTTCTGGTGTGATCGTCGATAAACCCGACAGTTCTCAGCGGTTTAGTAAATTAAGCCGCCAGCTGCTTGGTGCCAGTTCCGATCGTCTGCAGGAAAACTCACTGTTTGATATCGTCAACACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACCCATGTGTTCCGCGTGGGTACGTATAAATCTGCCGTTGAACCGTTTATTCGTGATGATATGTCACCGGCAGCCCGCGAAGCTGACAGCCGCTGGATTGGTGAGCTGTGGCAAAACTATCTGAATACTGTTGCCGCTAACCGGCAGATCCCTGCTGAGCAGGTATTCCCTGGCGCGCAAGGGTTGCTTGAGGGTTTAACCAAAACCGGTGGCGATACCGCGAAATATGCACTGGAAAACAAGCTGGTCGATGCACTGGCATCGAGTGCGGAAATCGAAAAAGCACTGACCAAAGAATTCGGCTGGAGTAAGACTGATAAAAATTATCGCGCCATCAGTTATTACGATTACGCATTGAAAACGCCGGCAGATACCGGTGACAGCATCGGTGTCGTCTTTGCTAATGGCGCAATTATGGATGGCGAGGAAACTCAGGGGAATGTTGGCGGTGATACCACTGCGGCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGGATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGATGGACAACATGTCTGGTTCTGTCCGGGCAATGTTGCCAGATGCGTTCCAGGCCATGTTACCTGCACCGCTGGCCTCGGTAGCCTCTACCGTTAAAAGTGAAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAA", + "dna_sequence_length": 1857, + "functions": [ + "protease IV (signal peptide peptidase)" + ], + "id": "CDS_1755", + "location": [ + [ + "NC_000913", + 1848837, + "+", + 1857 + ] + ], + "md5": "6a44dfa5fedaa8a993c9923a9bb6ba5d", + "parent_gene": "", + "protein_md5": "5dcbf935f5a340f2788eac3942e486ee", + "protein_translation": "MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANMR", + "protein_translation_length": 618, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005886" + ], + [ + "gene_synonym", + "ECK1765" + ], + [ + "gene_synonym", + "EcoGene:EG10045" + ], + [ + "gene_synonym", + "GI:16129721" + ], + [ + "gene_synonym", + "GeneID:946278" + ], + [ + "gene_synonym", + "JW1756" + ], + [ + "gene_synonym", + "NP_416281.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A962" + ], + [ + "gene_synonym", + "ansA" + ], + [ + "gene_synonym", + "b1767" + ] + ], + "dna_sequence": "ATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGACAGGGTCACAAATCCCGCTGGCTGAGTTACGCTCTGACGGACAAATTAATCTGCTGAATGCGTTGTACGTTGCGGCGAATTATCCGATCAACGAAGTAACGCTCTTTTTCAATAACCGATTGTATCGCGGCAACCGCACTACCAAAGCCCATGCCGATGGTTTTGATGCGTTTGCCTCTCCAAACCTTCCTCCGTTACTGGAAGCAGGTATCCATATTCGTCGTTTGAATACGCCACCCGCCCCGCACGGTGAAGGGGAATTAATCGTTCATCCAATCACCCCACAACCAATTGGCGTAGTGACGATTTATCCAGGGATTTCTGCTGACGTCGTGCGCAATTTTCTGCGCCAACCGGTGAAAGCATTGATTCTGCGCTCCTATGGCGTGGGTAATGCGCCACAAAACAAAGCCTTCCTGCAGGAATTACAAGAAGCCAGCGATCGCGGTATTGTGGTGGTCAACCTGACACAATGTATGTCCGGTAAAGTGAACATGGGTGGTTATGCCACCGGTAACGCCCTCGCCCATGCCGGCGTAATTGGCGGTGCAGATATGACTGTAGAAGCCACGCTAACCAAACTGCATTACCTGCTTAGCCAGGAACTGGATACTGAAACCATTCGCAAGGCCATGAGCCAAAACCTGCGCGGCGAACTGACGCCGGATGATTAA", + "dna_sequence_length": 1017, + "functions": [ + "cytoplasmic L-asparaginase 1" + ], + "id": "CDS_1756", + "location": [ + [ + "NC_000913", + 1850860, + "+", + 1017 + ] + ], + "md5": "be807b94fe8d7eb9adbd97c7f1c99c67", + "parent_gene": "", + "protein_md5": "f4af71ea214c1b0f3914e4c166f97980", + "protein_translation": "MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005891" + ], + [ + "gene_synonym", + "ECK1766" + ], + [ + "gene_synonym", + "EcoGene:EG11135" + ], + [ + "gene_synonym", + "GI:90111327" + ], + [ + "gene_synonym", + "GeneID:946276" + ], + [ + "gene_synonym", + "JW1757" + ], + [ + "gene_synonym", + "NP_416282.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21369" + ], + [ + "gene_synonym", + "b1768" + ], + [ + "gene_synonym", + "nam" + ], + [ + "gene_synonym", + "pncA" + ], + [ + "gene_synonym", + "ydjB" + ] + ], + "dna_sequence": "ATGCCCCCTCGCGCCCTGTTACTGGTCGATTTACAAAATGATTTCTGTGCTGGTGGCGCGCTCGCCGTGCCGGAAGGTGACAGTACGGTGGATGTCGCTAACCGCCTGATTGACTGGTGCCAGTCGCGCGGTGAAGCGGTTATCGCCAGTCAGGACTGGCACCCGGCGAATCACGGCAGTTTTGCCAGTCAGCACGGTGTAGAGCCTTATACGCCAGGCCAACTCGACGGTTTGCCACAAACCTTCTGGCCAGATCACTGTGTGCAGAACAGTGAAGGCGCACAATTACATCCGTTACTGCACCAAAAAGCGATCGCAGCGGTGTTCCATAAAGGCGAAAATCCTTTAGTTGACAGTTACAGTGCCTTTTTTGATAACGGCCGTCGGCAGAAAACCTCTCTCGATGACTGGTTACGCGATCATGAAATCGATGAATTGATCGTTATGGGCCTGGCTACTGACTATTGCGTGAAGTTTACCGTGCTGGACGCGTTACAGTTAGGTTATAAGGTAAACGTGATTACCGATGGTTGTCGTGGCGTGAATATCCAGCCCCAGGACAGTGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAA", + "dna_sequence_length": 642, + "functions": [ + "nicotinamidase/pyrazinamidase" + ], + "id": "CDS_1757", + "location": [ + [ + "NC_000913", + 1851887, + "+", + 642 + ] + ], + "md5": "08cb502195295dd33d13ffba5f776c7e", + "parent_gene": "", + "protein_md5": "b72c71c4ba0b75de6c308a8ccf4a4cbe", + "protein_translation": "MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005894" + ], + [ + "gene_synonym", + "ECK1767" + ], + [ + "gene_synonym", + "EcoGene:EG12369" + ], + [ + "gene_synonym", + "GI:16129723" + ], + [ + "gene_synonym", + "GeneID:946274" + ], + [ + "gene_synonym", + "JW1758" + ], + [ + "gene_synonym", + "NP_416283.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38055" + ], + [ + "gene_synonym", + "b1769" + ], + [ + "gene_synonym", + "ydjE" + ] + ], + "dna_sequence": "ATGGAACAATATGATCAAATTGGCGCAAGACTGGACCGCTTGCCTTTGGCCCGGTTTCATTATCGTATATTTGGTATTATAAGCTTTAGTCTGTTATTAACAGGGTTTTTGAGTTACTCCGGTAATGTCGTCTTAGCAAAGCTGGTAAGCAATGGATGGTCAAATAATTTCCTCAATGCCGCCTTTACCTCGGCATTAATGTTTGGTTATTTCATCGGCTCACTTACTGGTGGGTTTATTGGTGACTACTTTGGGCGGCGCAGGGCGTTTCGCATAAATCTTCTCATCGTCGGTATTGCTGCAACAGGGGCCGCTTTTGTCCCTGATATGTACTGGCTCATCTTCTTTCGCTTCCTGATGGGAACAGGAATGGGGGCGCTGATTATGGTTGGCTATGCCTCATTTACGGAGTTTATCCCCGCGACGGTGCGTGGAAAATGGTCCGCGCGGCTCTCATTTGTTGGTAACTGGTCGCCCATGCTGTCTGCGGCGATAGGCGTGGTGGTTATCGCTTTTTTTAGTTGGCGAATAATGTTTCTGCTGGGTGGTATTGGCATACTGTTAGCCTGGTTTCTCTCAGGTAAATACTTTATCGAGTCGCCACGATGGCTGGCAGGGAAAGGGCAAATCGCAGGTGCAGAATGCCAACTTCGTGAAGTAGAGCAGCAAATTGAAAGAGAGAAGAGTATTCGTTTACCCCCGCTTACTTCGTATCAGAGCAACAGCAAGGTTAAAGTAATCAAGGGTACTTTCTGGCTCCTGTTTAAAGGTGAAATGTTACGACGTACATTAGTCGCGATTACTGTTTTAATTGCAATGAACATTTCGCTTTATACCATCACCGTATGGATACCGACCATATTTGTTAACTCCGGCATTGATGTCGATAAATCAATATTAATGACCGCTGTTATTATGATTGGCGCTCCGGTAGGAATATTTATTGCGGCATTAATTATTGATCATTTTCCTCGTCGGTTATTTGGCTCCACCTTACTTATTATTATTGCCGTGTTAGGCTATATCTATTCAATTCAGACTACAGAGTGGGCGATTTTAATCTATGGACTGGTGATGATCTTCTTTTTATACATGTATGTTTGCTTCGCGTCGGCGGTTTATATCCCGGAGCTTTGGCCAACGCATTTACGCCTGCGCGGTTCGGGTTTCGTTAATGCCGTCGGACGGATCGTCGCAGTCTTCACGCCCTATGGCGTTGCGGCATTATTAACACATTATGGGTCGATCACGGTGTTTATGGTACTTGGTGTTATGTTATTGCTCTGTGCGCTGGTTCTCTCCATTTTTGGCATCGAAACGCGGAAGGTGTCGTTGGAAGAGATTTCTGAGGTGAATTAA", + "dna_sequence_length": 1359, + "functions": [ + "putative MFS sugar transporter, membrane protein" + ], + "id": "CDS_1758", + "location": [ + [ + "NC_000913", + 1853979, + "-", + 1359 + ] + ], + "md5": "25db23ff2fe2f079a4a8cdced65c686b", + "parent_gene": "", + "protein_md5": "2014e76a6fe023cd3aa2265a6db7cdf6", + "protein_translation": "MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVVLAKLVSNGWSNNFLNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAATGAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPMLSAAIGVVVIAFFSWRIMFLLGGIGILLAWFLSGKYFIESPRWLAGKGQIAGAECQLREVEQQIEREKSIRLPPLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNISLYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIDHFPRRLFGSTLLIIIAVLGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVNAVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLLLCALVLSIFGIETRKVSLEEISEVN", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005897" + ], + [ + "gene_synonym", + "ECK1768" + ], + [ + "gene_synonym", + "EcoGene:EG13482" + ], + [ + "gene_synonym", + "GI:16129724" + ], + [ + "gene_synonym", + "GeneID:946272" + ], + [ + "gene_synonym", + "JW1759" + ], + [ + "gene_synonym", + "NP_416284.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77721" + ], + [ + "gene_synonym", + "b1770" + ], + [ + "gene_synonym", + "ydjF" + ] + ], + "dna_sequence": "GTGGCGGCAAAAGACAGGATTCAGGCAATTAAGCAAATGGTTGCCAACGATAAAAAGGTGACAGTCTCAAATTTGAGTGGGATTTTTCAGGTAACCGAAGAAACCATTCGCCGCGATCTTGAGAAGCTGGAAGATGAAGGCTTTTTGACCAGAACCTATGGTGGTGCTGTTTTAAATACAGCGATGTTGACGGAGAATATCCATTTTTATAAGCGCGCTTCATCGTTTTATGAAGAGAAGCAGCTTATTGCACGCAAGGCACTACCCTTTATCGACAATAAAACCACCATGGCAGCCGATTCCAGTAGTACCGTAATGGAATTGCTCAAATTGTTACAGGACCGTAGTGGCCTGACGTTGCTAACCAACTCGGCGGAAGCGATTCATGTTCTGGCTCAGTCAGAAATTAAAGTCGTTTCAACGGGTGGGGAACTAAACAAAAATACACTTTCACTGCAAGGAAGAATTACTAAAGAGATCATCAGGCGCTATCATGTCGATATCATGGTAATGAGTTGTAAAGGTCTTGATATTAACAGCGGCGCGCTGGACTCTAATGAAGCGGAAGCTGAAATCAAAAAGACAATGATCCGTCAGGCGACAGAAGTTGCGTTATTGGTTGATCACTCTAAGTTTGATCGCAAAGCTTTTGTCCAGTTAGCTGATTTTAGTCATATTAATTACATAATAACTGATAAATCACCGGGTGCAGAGTGGATAGCATTTTGCAAAGACAATAATATCCAGCTGGTGTGGTAA", + "dna_sequence_length": 759, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1759", + "location": [ + [ + "NC_000913", + 1854854, + "-", + 759 + ] + ], + "md5": "ded82a0f38d9d06a3b2f85729d4c108b", + "parent_gene": "", + "protein_md5": "2f63e5b36ada8e2eceb5a64b53874fc3", + "protein_translation": "MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSSSTVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEIIRRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFVQLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005901" + ], + [ + "gene_synonym", + "ECK1769" + ], + [ + "gene_synonym", + "EcoGene:EG13483" + ], + [ + "gene_synonym", + "GI:16129725" + ], + [ + "gene_synonym", + "GeneID:946283" + ], + [ + "gene_synonym", + "JW1760" + ], + [ + "gene_synonym", + "NP_416285.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77256" + ], + [ + "gene_synonym", + "b1771" + ], + [ + "gene_synonym", + "ydjG" + ] + ], + "dna_sequence": "ATGAAAAAGATACCTTTAGGCACAACGGATATTACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGGCGGCGGTCCTGCATGGAATGGCGATCTCGATCGGCAAATATGTATTGATACGATTCTTGAAGCCCATCGTTGTGGCATTAATCTGATTGATACTGCGCCAGGATATAACTTTGGCAATAGTGAAGTTATCGTCGGTCAGGCGTTAAAAAAACTGCCCCGTGAACAGGTTGTAGTAGAAACCAAATGCGGCATTGTCTGGGAACGAAAAGGAAGTTTATTCAACAAAGTTGGCGATCGGCAGTTGTATAAAAACCTTTCCCCGGAATCTATCCGCGAAGAGGTAGCAGCGAGCTTGCAACGTCTGGGTATTGATTACATCGATATCTACATGACGCACTGGCAGTCGGTGCCGCCATTTTTTACGCCGATCGCTGAAACTGTCGCAGTGCTTAATGAGTTAAAGTCTGAAGGGAAAATTCGCGCTATAGGCGCTGCTAACGTCGATGCTGACCATATCCGCGAGTATCTGCAATATGGTGAACTGGATATTATTCAGGCGAAATACAGTATCCTCGACCGGGCAATGGAAAACGAACTGCTGCCACTATGTCGTGATAATGGCATTGTGGTTCAGGTTTATTCCCCGCTAGAGCAGGGATTGTTGACCGGCACCATCACTCGTGATTACGTTCCGGGCGGCGCTCGGGCAAATAAAGTCTGGTTCCAGCGTGAAAACATGCTGAAAGTGATTGATATGCTTGAACAGTGGCAGCCACTTTGTGCTCGTTATCAGTGCACAATTCCCACTCTGGCACTGGCGTGGATATTAAAACAGAGTGATTTAATCTCCATTCTTAGTGGGGCTACTGCACCGGAACAGGTACGCGAAAATGTCGCGGCACTGAATATCAACTTATCGGATGCAGACGCAACATTGATGAGGGAAATGGCAGAGGCCCTGGAGCGTTAA", + "dna_sequence_length": 981, + "functions": [ + "methylglyoxal reductase, NADH-dependent" + ], + "id": "CDS_1760", + "location": [ + [ + "NC_000913", + 1855971, + "-", + 981 + ] + ], + "md5": "ea8eaafffebd75106bd1d9c21ec4abdc", + "parent_gene": "", + "protein_md5": "aa098f923ce386ef6525b8bdd915552f", + "protein_translation": "MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005903" + ], + [ + "gene_synonym", + "ECK1770" + ], + [ + "gene_synonym", + "EcoGene:EG13484" + ], + [ + "gene_synonym", + "GI:90111328" + ], + [ + "gene_synonym", + "GeneID:946285" + ], + [ + "gene_synonym", + "JW5289" + ], + [ + "gene_synonym", + "NP_416286.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77493" + ], + [ + "gene_synonym", + "b1772" + ], + [ + "gene_synonym", + "ydjH" + ] + ], + "dna_sequence": "ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGATGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGTGATGCAATAAATGAAGCAACAATTATTTCTCGTCTGGGCCATCGCACAGCATTAATGAGTCGTATTGGTAAAGATGCCGCAGGGCAATTTATTCTCGACCATTGCCGCAAAGAGAATATTGATATTCAAAGCCTGAAGCAGGACGTCAGCATAGATACCTCTATTAACGTTGGACTGGTGACGGAGGATGGCGAGCGGACGTTTGTCACAAACCGTAATGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTGCGCGGTTTTCTCAGGCGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCACTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCTAAAGCCCGGCAGATGATTATCTGTGCCGATATGATCAAACCGCGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATTGAGTTATGTCGATTATCTGTTTCCTAATTTTGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTGACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATGACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTATTGCGGCACTGTTAGAAGGCAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCGTCGGTGCCACCACCGGCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA", + "dna_sequence_length": 948, + "functions": [ + "putative kinase" + ], + "id": "CDS_1761", + "location": [ + [ + "NC_000913", + 1856928, + "-", + 948 + ] + ], + "md5": "5a9509085404f36b7d92b51ea798197d", + "parent_gene": "", + "protein_md5": "3211e9f12703007aa8e6332f1d33d7b3", + "protein_translation": "MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005906" + ], + [ + "gene_synonym", + "ECK1771" + ], + [ + "gene_synonym", + "EcoGene:EG13485" + ], + [ + "gene_synonym", + "GI:16129727" + ], + [ + "gene_synonym", + "GeneID:946291" + ], + [ + "gene_synonym", + "JW1762" + ], + [ + "gene_synonym", + "NP_416287.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77704" + ], + [ + "gene_synonym", + "b1773" + ], + [ + "gene_synonym", + "ydjI" + ] + ], + "dna_sequence": "ATGCTCGCAGATATCAGATATTGGGAAAACGATGCCACAAATAAACATTATGCAATTGCCCATTTTAACGTATGGAATGCAGAAATGTTGATGGGCGTTATCGACGCAGCCGAAGAAGCGAAATCCCCGGTTATTATTTCTTTTGGTACAGGTTTTGTCGGTAACACCTCATTTGAAGATTTCTCTCACATGATGGTATCAATGGCACAAAAAGCAACGGTGCCGGTAATAACTCATTGGGATCATGGTCGGAGTATGGAGATTATTCATAACGCCTGGACTCATGGTATGAATTCATTAATGCGTGATGCTTCCGCGTTTGATTTCGAAGAAAATATTCGTTTAACCAAAGAGGCTGTCGATTTCTTCCATCCGCTGGGTATTCCGGTAGAGGCGGAATTAGGGCATGTCGGTAATGAAACCGTTTATGAGGAAGCGCTGGCGGGCTATCACTATACCGATCCTGACCAGGCGGCTGAATTTGTTGAACGTACGGGCTGTGATTCATTGGCTGTCGCCATCGGCAACCAGCATGGGGTTTATACGTCAGAGCCACAATTGAACTTTGAGGTCGTCAAACGCGTACGCGATGCCGTTTCTGTTCCGCTGGTTTTGCACGGTGCATCGGGGATCAGTGATGCCGACATTAAAACTGCAATTTCGTTGGGTATCGCGAAAATCAACATTCATACGGAGCTCTGTCAGGCCGCAATGGTTGCAGTGAAAGAAAACCAGGATCAGCCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAAAATTAAACTGTTCGGTTCTGATGGCAAAGCGGAATAA", + "dna_sequence_length": 837, + "functions": [ + "putative aldolase" + ], + "id": "CDS_1762", + "location": [ + [ + "NC_000913", + 1857769, + "-", + 837 + ] + ], + "md5": "77bc8677a56c5a95003eea5d4df4ab97", + "parent_gene": "", + "protein_md5": "d2fd2b8c192f1a528cdd62d2815dd150", + "protein_translation": "MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005908" + ], + [ + "gene_synonym", + "ECK1772" + ], + [ + "gene_synonym", + "EcoGene:EG13486" + ], + [ + "gene_synonym", + "GI:16129728" + ], + [ + "gene_synonym", + "GeneID:946292" + ], + [ + "gene_synonym", + "JW1763" + ], + [ + "gene_synonym", + "NP_416288.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77280" + ], + [ + "gene_synonym", + "b1774" + ], + [ + "gene_synonym", + "ydjJ" + ] + ], + "dna_sequence": "ATGAAAAATTCAAAAGCAATATTGCAGGTGCCGGGCACAATGAAAATTATTTCAGCAGAAATACCAGTGCCTAAAGAAGATGAAGTTTTGATTAAAGTAGAATATGTCGGTATTTGTGGTTCAGATGTACATGGTTTTGAATCAGGCCCGTTTATTCCGCCTAAAGACCCAAATCAAGAAATTGGCCTGGGTCATGAATGCGCCGGGACGGTTGTGGCTGTGGGAAGCCGCGTGCGCAAATTTAAACCGGGGGATCGGGTAAATATCGAACCTGGCGTTCCTTGCGGTCACTGTCGTTACTGTCTGGAAGGCAAATATAACATCTGCCCGGACGTTGATTTTATGGCGACACAACCCAACTACCGCGGCGCATTAACGCACTATCTGTGTCATCCGGAGAGCTTTACTTACAAACTGCCCGACAATATGGACACGATGGAAGGGGCGCTGGTGGAGCCTGCCGCAGTCGGGATGCATGCCGCGATGCTGGCAGATGTTAAACCGGGTAAGAAGATAATTATTCTGGGAGCAGGTTGTATTGGTTTGATGACGTTGCAAGCGTGCAAATGCCTGGGAGCAACGGAAATTGCCGTCGTTGATGTGCTGGAAAAACGTCTGGCAATGGCGGAACAGCTTGGTGCGACAGTGGTTATTAACGGCGCAAAAGAAGACACTATTGCACGCTGTCAGCAATTTACCGAAGACATGGGCGCAGATATTGTTTTCGAAACAGCGGGTTCTGCGGTCACCGTTAAACAGGCACCTTATCTGGTAATGCGCGGCGGTAAAATTATGATTGTTGGTACTGTACCCGGCGATTCGGCAATCAATTTCCTCAAAATCAATCGCGAAGTCACTATCCAGACGGTATTCCGCTATGCCAATCGTTATCCGGTCACGATTGAAGCTATTTCTTCAGGGCGATTCGATGTGAAATCGATGGTGACGCATATTTACGATTATCGGGATGTACAACAGGCATTTGAAGAGTCAGTTAACAACAAACGCGACATTATTAAAGGCGTTATTAAAATTAGCGATTAA", + "dna_sequence_length": 1044, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_1763", + "location": [ + [ + "NC_000913", + 1858833, + "-", + 1044 + ] + ], + "md5": "01d9507011748c87b72176c1d7b4648a", + "parent_gene": "", + "protein_md5": "abd51811b98e2c73a93bd48a06dc0eef", + "protein_translation": "MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNNKRDIIKGVIKISD", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005910" + ], + [ + "gene_synonym", + "ECK1773" + ], + [ + "gene_synonym", + "EcoGene:EG13487" + ], + [ + "gene_synonym", + "GI:16129729" + ], + [ + "gene_synonym", + "GeneID:946293" + ], + [ + "gene_synonym", + "JW5290" + ], + [ + "gene_synonym", + "NP_416289.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76230" + ], + [ + "gene_synonym", + "b1775" + ], + [ + "gene_synonym", + "ydjK" + ] + ], + "dna_sequence": "ATGGAACAGATAACAAAACCGCATTGTGGTGCACGGCTGGATCGCTTACCGGATTGCCGCTGGCATTCATCAATGTTTGCCATCGTCGCGTTTGGCTTGCTTGTCTGCTGGAGTAATGCCGTTGGTGGCTTGATCCTCGCGCAGCTGAAAGCGTTGGGCTGGACAGATAATTCCACCACAGCCACATTCTCAGCAATCACGACCGCCGGAATGTTTCTCGGTGCGCTGGTGGGCGGCATCATTGGCGACAAAACCGGTCGCAGAAATGCGTTCATCCTCTATGAGGCCATTCATATTGCCTCGATGGTTGTCGGTGCTTTCTCACCGAATATGGATTTCCTTATTGCCTGCCGTTTTGTGATGGGAGTTGGGCTGGGAGCTTTACTGGTTACGCTGTTTGCTGGTTTCACCGAATATATGCCCGGTAGAAATCGTGGAACGTGGTCAAGTCGGGTTTCCTTTATTGGCAACTGGTCATATCCGCTCTGTTCATTGATAGCGATGGGACTCACGCCGCTGATTAGTGCAGAGTGGAACTGGCGGGTACAACTGCTTATCCCTGCAATATTGTCGCTTATCGCTACGGCGCTGGCCTGGCGCTACTTTCCTGAATCCCCGCGCTGGCTGGAATCGCGCGGACGGTATCAGGAAGCCGAGAAAGTCATGCGGAGTATAGAAGAAGGCGTCATACGCCAGACGGGTAAACCTTTGCCGCCTGTGGTTATTGCTGATGACGGTAAAGCGCCACAAGCGGTGCCGTATTCAGCCTTACTGACAGGAGTATTACTGAAACGCGTGATATTAGGCTCTTGTGTGCTGATTGCCATGAACGTTGTGCAGTACACACTAATTAACTGGTTGCCAACAATATTCATGACCCAGGGGATTAATTTAAAAGACTCGATTGTTTTAAATACCATGAGTATGTTTGGCGCGCCATTTGGTATTTTTATTGCCATGCTGGTGATGGATAAAATTCCGCGTAAAACAATGGGTGTGGGGCTATTAATCCTGATTGCGGTGCTCGGATATATCTATTCACTGCAAACCAGTATGTTGCTCATAACGTTGATTGGTTTCTTCCTGATTACTTTCGTCTATATGTACGTTTGCTATGCCTCGGCAGTGTATGTCCCTGAAATCTGGCCGACAGAGGCCAAACTCCGTGGCTCCGGTCTGGCGAATGCGGTAGGGCGAATCAGTGGTATTGCCGCACCTTATGCCGTTGCAGTGCTGCTCAGTAGTTATGGCGTTACGGGAGTCTTTATTCTTCTGGGGGCGGTTTCAATTATTGTCGCAATTGCTATCGCCACCATTGGAATCGAAACCAAAGGTGTCTCCGTTGAAAGTTTAAGTATTGATGCAGTAGCCAATAAATAA", + "dna_sequence_length": 1380, + "functions": [ + "putative MFS sugar transporter, membrane protein" + ], + "id": "CDS_1764", + "location": [ + [ + "NC_000913", + 1860229, + "-", + 1380 + ] + ], + "md5": "f8de9cdae1a291b5e2abfb62b2e4cd68", + "parent_gene": "", + "protein_md5": "3b8d04b82693c4a37fc7e27dd7defe60", + "protein_translation": "MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK", + "protein_translation_length": 459, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005912" + ], + [ + "gene_synonym", + "ECK1774" + ], + [ + "gene_synonym", + "EcoGene:EG13488" + ], + [ + "gene_synonym", + "GI:16129730" + ], + [ + "gene_synonym", + "GeneID:946299" + ], + [ + "gene_synonym", + "JW1765" + ], + [ + "gene_synonym", + "NP_416290.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77539" + ], + [ + "gene_synonym", + "b1776" + ], + [ + "gene_synonym", + "ydjL" + ] + ], + "dna_sequence": "ATGAAAGCACTGGCTCGGTTTGGCAAGGCCTTTGGCGGCTACAAGATGATTGATGTCCCACAACCCATGTGTGGCCCGGAAGATGTAGTGATTGAAATTAAAGCCGCGGCAATCTGCGGCGCAGACATGAAGCACTACAATGTCGATAGCGGTTCTGATGAGTTTAACTCTATCCGCGGCCATGAGTTCGCAGGTTGTATTGCGCAGGTTGGTGAAAAAGTCAAAGACTGGAAAGTGGGGCAACGCGTCGTATCGGATAACAGCGGTCACGTTTGCGGTGTTTGTCCGGCCTGTGAACAAGGTGATTTTCTGTGTTGTACAGAAAAAGTAAACCTTGGTCTGGATAATAATACCTGGGGCGGTGGTTTTTCCAAATATTGTCTGGTTCCTGGTGAAATTCTCAAAATTCATCGTCATGCGTTGTGGGAAATCCCTGATGGTGTTGATTATGAGGACGCAGCCGTACTTGACCCTATCTGTAATGCCTACAAATCCATCGCGCAGCAATCGAAATTCCTTCCTGGTCAGGATGTGGTCGTCATCGGCACTGGCCCACTCGGGCTGTTCTCCGTACAAATGGCGCGAATTATGGGGGCGGTAAATATCGTCGTCGTTGGTCTGCAAGAAGATGTGGCGGTCCGCTTCCCGGTTGCAAAAGAACTGGGTGCGACGGCAGTAGTAAATGGTTCTACCGAAGATGTGGTGGCGCGCTGCCAGCAAATTTGTGGCAAAGACAATCTGGGACTGGTGATTGAATGCTCCGGTGCCAATATCGCACTGAAACAAGCCATCGAAATGCTCCGCCCGAACGGGGAAGTGGTACGCGTTGGAATGGGCTTCAAACCTCTTGATTTCTCGATTAATGACATTACCGCCTGGAACAAAAGCATCATTGGGCATATGGCCTATGACTCCACCTCATGGCGTAACGCTATCAGGCTATTAGCCAGCGGCGCTATCAAAGTCAAACCGATGATCACGCATCGTATCGGCCTGTCGCAATGGCGCGAAGGGTTTGATGCGATGGTCGATAAAACCGCAATCAAAGTGATCATGACTTACGACTTTGATGAATAA", + "dna_sequence_length": 1077, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_1765", + "location": [ + [ + "NC_000913", + 1861332, + "-", + 1077 + ] + ], + "md5": "eea41cf94fae265ad700b77e22ab4a73", + "parent_gene": "", + "protein_md5": "17a43151260d66138bdb48ce4802cdbf", + "protein_translation": "MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE", + "protein_translation_length": 358, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005914" + ], + [ + "gene_synonym", + "ECK1775" + ], + [ + "gene_synonym", + "EcoGene:EG13489" + ], + [ + "gene_synonym", + "GI:90111329" + ], + [ + "gene_synonym", + "GeneID:947074" + ], + [ + "gene_synonym", + "JW1766" + ], + [ + "gene_synonym", + "NP_416291.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76231" + ], + [ + "gene_synonym", + "b1777" + ], + [ + "gene_synonym", + "yeaC" + ] + ], + "dna_sequence": "ATGAATCTTGATGACATTATCAACAGCATGATGCCTGAGGTATACCAGCGTTTGTCGACCGCCGTTGAACTGGGGAAATGGCCTGATGGCGTTGCGTTGACCGAGGAACAAAAAGAGAACTGCCTGCAACTGGTGATGCTGTGGCAAGCCCGCCATAATATCGAAGCACAGCATATGACAATTGACACAAATGGTCAGATGGTCATGAAGAGCAAACAGCAGTTAAAAGAAGATTTTGGTATCTCAGCAAAGCCTATTGCCATGTTTAAGTAA", + "dna_sequence_length": 273, + "functions": [ + "DUF1315 family protein" + ], + "id": "CDS_1766", + "location": [ + [ + "NC_000913", + 1861974, + "-", + 273 + ] + ], + "md5": "669d64dc348bdb6169c8a2633ad5b094", + "parent_gene": "", + "protein_md5": "fc2ab03840b63343b9e444654223b798", + "protein_translation": "MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005916" + ], + [ + "gene_synonym", + "ECK1776" + ], + [ + "gene_synonym", + "EcoGene:EG12394" + ], + [ + "gene_synonym", + "GI:16129732" + ], + [ + "gene_synonym", + "GeneID:947188" + ], + [ + "gene_synonym", + "JW1767" + ], + [ + "gene_synonym", + "NP_416292.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A746" + ], + [ + "gene_synonym", + "b1778" + ], + [ + "gene_synonym", + "msrB" + ], + [ + "gene_synonym", + "yeaA" + ] + ], + "dna_sequence": "ATGGCTAATAAACCTTCGGCAGAAGAACTGAAAAAAAATTTGTCCGAGATGCAGTTTTACGTGACGCAGAATCATGGGACAGAGCCGCCATTTACGGGTCGTTTACTGCATAACAAGCGTGACGGCGTATATCACTGTTTGATCTGCGATGCCCCGCTGTTTCATTCCCAAACCAAGTATGATTCCGGCTGTGGCTGGCCCAGTTTCTACGAACCGGTAAGTGAAGAATCCATTCGTTATATCAAAGACTTGTCACATGGAATGCAGCGCATAGAAATTCGTTGCGGTAACTGTGATGCCCATCTGGGGCATGTCTTCCCCGACGGGCCGCAGCCAACGGGCGAACGTTATTGTGTTAACTCTGCCTCTTTACGCTTTACCGATGGCGAAAACGGCGAAGAAATCAACGGTTGA", + "dna_sequence_length": 414, + "functions": [ + "methionine sulfoxide reductase B" + ], + "id": "CDS_1767", + "location": [ + [ + "NC_000913", + 1862429, + "-", + 414 + ] + ], + "md5": "209ebce79123186fab663d742aa6e88b", + "parent_gene": "", + "protein_md5": "acca6325d1d2cdeab1f6106e3f4038c3", + "protein_translation": "MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVNSASLRFTDGENGEEING", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005920" + ], + [ + "gene_synonym", + "ECK1777" + ], + [ + "gene_synonym", + "EcoGene:EG10367" + ], + [ + "gene_synonym", + "GI:16129733" + ], + [ + "gene_synonym", + "GeneID:947679" + ], + [ + "gene_synonym", + "JW1768" + ], + [ + "gene_synonym", + "NP_416293.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9B2" + ], + [ + "gene_synonym", + "b1779" + ], + [ + "gene_synonym", + "gapA" + ] + ], + "dna_sequence": "ATGACTATCAAAGTAGGTATCAACGGTTTTGGCCGTATCGGTCGCATTGTTTTCCGTGCTGCTCAGAAACGTTCTGACATCGAGATCGTTGCAATCAACGACCTGTTAGACGCTGATTACATGGCATACATGCTGAAATATGACTCCACTCACGGCCGTTTCGACGGTACCGTTGAAGTGAAAGACGGTCATCTGATCGTTAACGGTAAAAAAATCCGTGTTACCGCTGAACGTGATCCGGCTAACCTGAAATGGGACGAAGTTGGTGTTGACGTTGTCGCTGAAGCAACTGGTCTGTTCCTGACTGACGAAACTGCTCGTAAACACATCACCGCTGGTGCGAAGAAAGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGTCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAA", + "dna_sequence_length": 996, + "functions": [ + "glyceraldehyde-3-phosphate dehydrogenase A" + ], + "id": "CDS_1768", + "location": [ + [ + "NC_000913", + 1862771, + "+", + 996 + ] + ], + "md5": "542eeddf9e93ab3449d8992044a018f8", + "parent_gene": "", + "protein_md5": "adec9c8c296a076912033969d932bc85", + "protein_translation": "MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005923" + ], + [ + "gene_synonym", + "ECK1778" + ], + [ + "gene_synonym", + "EcoGene:EG12679" + ], + [ + "gene_synonym", + "GI:90111330" + ], + [ + "gene_synonym", + "GeneID:946572" + ], + [ + "gene_synonym", + "JW1769" + ], + [ + "gene_synonym", + "NP_416294.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39173" + ], + [ + "gene_synonym", + "b1780" + ], + [ + "gene_synonym", + "yeaD" + ], + [ + "gene_synonym", + "yzzQ" + ] + ], + "dna_sequence": "ATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATGAACTGGACCTCATTGTGGTCGATCATCCCCAGGTAAAAGCCTCTTTTGCATTACAGGGCGCACACCTTCTCTCGTGGAAACCTGCGGGTGAAGAAGAAGTTCTGTGGTTGAGCAACAACACACCGTTCAAAAATGGCGTCGCTATTCGCGGTGGCGTACCGGTTTGCTGGCCGTGGTTTGGTCCGGCGGCACAACAAGGTCTGCCTGCGCACGGTTTTGCCCGCAACCTGCCGTGGACGCTGAAATCACATCATGAAGATGCTGATGGCGTAGCGCTGACTTTTGAATTGACGCAAAGCGAAGAGACGAAAAAATTCTGGCCGCACGACTTTACGCTGTTAGCGCATTTCCGCGTGGGTAAAACTTGTGAAATCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGACCGGCGCTTTCAATTAGCATGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAA", + "dna_sequence_length": 885, + "functions": [ + "D-hexose-6-phosphate epimerase-like protein" + ], + "id": "CDS_1769", + "location": [ + [ + "NC_000913", + 1863850, + "+", + 885 + ] + ], + "md5": "78b305e1b8709d7649f7e6f1c3b61a50", + "parent_gene": "", + "protein_md5": "16b312fec87b0fba3087d72530affc71", + "protein_translation": "MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005925" + ], + [ + "gene_synonym", + "ECK1779" + ], + [ + "gene_synonym", + "EcoGene:EG13491" + ], + [ + "gene_synonym", + "GI:16129735" + ], + [ + "gene_synonym", + "GeneID:946302" + ], + [ + "gene_synonym", + "JW1770" + ], + [ + "gene_synonym", + "NP_416295.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76234" + ], + [ + "gene_synonym", + "b1781" + ], + [ + "gene_synonym", + "yeaE" + ] + ], + "dna_sequence": "ATGCAACAAAAAATGATTCAATTTAGTGGCGATGTCTCACTGCCAGCCGTAGGGCAGGGAACATGGTATATGGGCGAAGATGCCAGTCAGCGCAAAACAGAAGTTGCTGCACTACGCGCGGGCATTGAACTCGGTTTAACCCTCATTGATACCGCCGAAATGTATGCCGATGGCGGTGCCGAAAAGGTGGTTGGGGAAGCATTAACCGGTCTGCGAGAGAAGGTCTTTCTCGTCTCTAAAGTCTATCCGTGGAATGCTGGCGGGCAAAAAGCGATAAATGCATGCGAAGCCAGTTTACGCCGTCTCAATACTGATTATCTCGATCTTTACTTATTACACTGGTCTGGCAGTTTCGCTTTTGAAGAGACTGTCGCAGCGATGGAAAAATTGATCGCCCAGGGAAAAATCCGCCGCTGGGGCGTTTCTAACCTTGATTATGCTGATATGCAGGAACTCTGGCAGCTGCCGGGGGGAAATCAGTGTGCCACTAATCAGGTGCTTTACCATCTCGGTTCACGAGGAATTGAGTACGATCTACTCCCCTGGTGCCAGCAACAGCAGATGCCGGTGATGGCTTACAGTCCGTTAGCCCAGGCCGGGCGGTTGCGCAATGGACTGTTAAAAAACGCGGTAGTCAACGAAATTGCACATGCTCACAATATCAGCGCGGCACAAGTATTGTTGGCGTGGGTGATCAGTCATCAGGGTGTGATGGCGATTCCAAAAGCGGCCACGATTGCCCATGTCCAACAAAATGCGGCTGTGCTTGAGGTCGAACTTTCTTCAGCGGAATTAGCTATGCTGGATAAGGCATATCCGGCACCAAAAGGAAAAACTGCGCTGGATATGGTGTGA", + "dna_sequence_length": 855, + "functions": [ + "aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent" + ], + "id": "CDS_1770", + "location": [ + [ + "NC_000913", + 1865636, + "-", + 855 + ] + ], + "md5": "a6c4f3d5aed6f1d76a1d76824a2bb665", + "parent_gene": "", + "protein_md5": "e7680b763945dee83ec1dd7660258d1e", + "protein_translation": "MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELAMLDKAYPAPKGKTALDMV", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005928" + ], + [ + "gene_synonym", + "ECK1780" + ], + [ + "gene_synonym", + "EcoGene:EG13492" + ], + [ + "gene_synonym", + "GI:16129736" + ], + [ + "gene_synonym", + "GeneID:946301" + ], + [ + "gene_synonym", + "JW1771" + ], + [ + "gene_synonym", + "NP_416296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A908" + ], + [ + "gene_synonym", + "b1782" + ], + [ + "gene_synonym", + "mipA" + ], + [ + "gene_synonym", + "yeaF" + ] + ], + "dna_sequence": "GTGACCAAACTCAAACTTCTGGCACTTGGAGTGCTTATCGCAACGTCTGCAGGCGTAGCGCACGCTGAAGGTAAATTTTCCCTGGGCGCAGGCGTAGGTGTCGTTGAACACCCATATAAAGATTACGATACCGATGTTTACCCAGTACCGGTAATCAACTATGAAGGCGATAACTTCTGGTTCCGTGGCTTAGGTGGTGGTTACTACCTGTGGAATGACGCAACGGATAAACTTTCAATTACCGCTTACTGGTCGCCGCTTTACTTCAAAGCGAAAGACAGTGGCGATCACCAAATGCGTCACCTGGATGACCGTAAGAGCACCATGATGGCTGGTCTGTCTTATGCTCACTTTACCCAGTACGGTTACCTGCGTACCACCCTGGCTGGCGATACCCTGGATAACAGCAACGGCATCGTCTGGGATATGGCCTGGTTGTATCGTTACACCAACGGTGGCCTGACCGTGACTCCGGGTATTGGTGTGCAGTGGAACAGCGAAAACCAGAACGAATACTATTATGGCGTATCGCGCAAAGAGTCCGCTCGCAGCGGTCTGCGTGGCTATAACCCGAACGACAGCTGGAGCCCTTACCTGGAGCTGAGCGCCAGCTACAACTTCCTCGGCGACTGGAGTGTTTACGGTACCGCACGCTACACCCGTCTGTCTGATGAAGTTACTGACAGCCCGATGGTGGATAAATCCTGGACTGGCCTGATTTCTACCGGGATCACCTACAAATTCTGA", + "dna_sequence_length": 747, + "functions": [ + "scaffolding protein for murein synthesizing machinery" + ], + "id": "CDS_1771", + "location": [ + [ + "NC_000913", + 1866472, + "-", + 747 + ] + ], + "md5": "66aaafd6a5bbc36496a62d5e5c0e4ef8", + "parent_gene": "", + "protein_md5": "51b8d2e815ac20348ba0221c0e11f6bb", + "protein_translation": "MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005935" + ], + [ + "gene_synonym", + "ECK1781" + ], + [ + "gene_synonym", + "EcoGene:EG13493" + ], + [ + "gene_synonym", + "GI:16129737" + ], + [ + "gene_synonym", + "GeneID:946297" + ], + [ + "gene_synonym", + "JW1772" + ], + [ + "gene_synonym", + "NP_416297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY3" + ], + [ + "gene_synonym", + "b1783" + ], + [ + "gene_synonym", + "yeaG" + ] + ], + "dna_sequence": "ATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTGGGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTGTTAACCGCCACTCAGGAAGGTAACTACAACGGGACGGAAGGTATCTCCGCCCTGCCGTTCAACGGGATTATTCTCGCACACTCGAACGAGTCCGAATGGGTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCGTATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTGTCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCTATTCCGAATATGGGCAAAACATTTTCGACCGTTATGTTACCTACGCGGATTTCTGGATTCAGGATCAGGAGTATCGCGATCCGGATACCGGGCAGCTGTTTGACCGCGAGTCTCTTAACGCCGAGCTGGAGAAAATCGAGAAACCGGCGGGGATCAGTAATCCAAAAGATTTCCGCAACGAGATTGTTAACTTCGTACTGCGCGCCAGAGCGAATAACAGCGGACGCAATCCGAACTGGACCAGCTATGAAAAACTGCGCACGGTCATCGAGAAGAAAATGTTCTCCAATACCGAGGAGCTGTTGCCGGTTATCTCGTTTAACGCCAAAACGTCAACCGACGAGCAGAAGAAACACGACGACTTTGTCGACCGTATGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAA", + "dna_sequence_length": 1935, + "functions": [ + "protein kinase, endogenous substrate unidentified", + "autokinase" + ], + "id": "CDS_1772", + "location": [ + [ + "NC_000913", + 1866908, + "+", + 1935 + ] + ], + "md5": "bad858554c4f0206921e44793957f822", + "parent_gene": "", + "protein_md5": "7d791ccfa3356359facd9673f209c23a", + "protein_translation": "MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS", + "protein_translation_length": 644, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005938" + ], + [ + "gene_synonym", + "ECK1782" + ], + [ + "gene_synonym", + "EcoGene:EG13494" + ], + [ + "gene_synonym", + "GI:16129738" + ], + [ + "gene_synonym", + "GeneID:946296" + ], + [ + "gene_synonym", + "JW1773" + ], + [ + "gene_synonym", + "NP_416298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76235" + ], + [ + "gene_synonym", + "b1784" + ], + [ + "gene_synonym", + "yeaH" + ] + ], + "dna_sequence": "ATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCGATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATCAGCAACAGTGAACCTGCGCAACTGCTGGAAGAGGAACGTCTGCGCAAAGAAATTGCAGAATTACGTGCCAAAATTGAACGCGTCCCTTTTATTGACACCTTCGATTTACGTTACAAGAACTACGAGAAGCGGCCCGATCCCTCCAGCCAGGCAGTGATGTTTTGCCTGATGGACGTTTCCGGTTCAATGGATCAATCCACTAAAGATATGGCTAAGCGTTTTTATATTCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTATTACCTGTTGTTCGTTATTACAGCTATATCGAAATTACCCGTCGTGCACATCAGACATTGTGGCGAGAATATGAGCATCTGCAATCTACTTTCGACAACTTTGCGATGCAGCACATCCGCGACCAGGATGATATTTATCCGGTGTTCCGTGAACTGTTTCATAAACAAAATGCAACAGCTAAAGGCTAA", + "dna_sequence_length": 1284, + "functions": [ + "UPF0229 family protein" + ], + "id": "CDS_1773", + "location": [ + [ + "NC_000913", + 1868955, + "+", + 1284 + ] + ], + "md5": "78d75825cfc4cdac86a49d7064e08a23", + "parent_gene": "", + "protein_md5": "ba3043f2e2914b147276f033cc5c8740", + "protein_translation": "MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKG", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005941" + ], + [ + "gene_synonym", + "ECK1783" + ], + [ + "gene_synonym", + "EcoGene:EG13495" + ], + [ + "gene_synonym", + "GI:16129739" + ], + [ + "gene_synonym", + "GeneID:946366" + ], + [ + "gene_synonym", + "JW1774" + ], + [ + "gene_synonym", + "NP_416299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76236" + ], + [ + "gene_synonym", + "b1785" + ], + [ + "gene_synonym", + "yeaI" + ] + ], + "dna_sequence": "ATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTGCCATCAATAAAATCCAGCACTCACATTGCTCTCCTTTTTATGGTTTCTATGGGTACACAAAAATTAAAAGCTCAAAGCTTTTTTATTTTCAGTTTATTGCTGACGTTAATTTTATTTTGCATTACTACCTTATATAACGAAAACACAAATGTAAAACTCATCCCACAGATGAATTACCTGATGGTTGTTGTGGCTTTGTTTTTCCTTAACGCCGTCATTTTTCTTTTCATGTTAATGAAATATTTCACTAACAAACAAATTTTACCAACACTCATTTTAAGCCTTGCATTTTTAAGTGGCCTTATCTATTTAGTTGAAACCATTGTAATTATCCATAAACCAATTAACGGCAGTACACTGATCCAGACAAAGTCGAATGATGTTTCTATTTTCTATATTTTCCGCCAACTCAGTTTTATTTGTTTAACCTCGCTGGCGCTCTTTTGTTATGGAAAAGACAACATCCTTGACAACAATAAGAAAAAAACGGGAATCCTGTTGCTGGCGCTGATCCCTTTTTTAGTTTTTCCCCTTCTGGCACACAATCTGAGCAGTTATAACGCTGACTATTCTTTGTATGTCGTCGATTACTGTCCGGACAACCATACTGCGACCTGGGGAATCAACTATACAAAAATATTGGTTTGTCTGTGGGCATTTTTACTGTTCTTTATTATCATGCGCACACGATTAGCCAGCGAACTATGGCCGTTAATAGCATTATTATGTCTGGCATCGCTATGCTGCAACTTACTTCTACTGACTCTGGATGAGTATAATTATACTATCTGGTATATCAGTCGCGGGATTGAAGTTTCCAGTAAACTGTTTGTTGTGTCTTTTCTGATTTATAACATTTTTCAGGAGCTGCAACTCTCCAGCAAACTGGCAGTTCATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAGGCAAAAATCATTGCGGAACGTATGCGTAAAAATGTCGAACTCCTGACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAA", + "dna_sequence_length": 1476, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_1774", + "location": [ + [ + "NC_000913", + 1870385, + "+", + 1476 + ] + ], + "md5": "7108c4caa8bff2870757d0e4a2b67e63", + "parent_gene": "", + "protein_md5": "5eda1cb086170e331a3c413e51100b66", + "protein_translation": "MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005943" + ], + [ + "gene_synonym", + "ECK1784" + ], + [ + "gene_synonym", + "EcoGene:EG13496" + ], + [ + "gene_synonym", + "GI:90111331" + ], + [ + "gene_synonym", + "GeneID:946290" + ], + [ + "gene_synonym", + "JW5291" + ], + [ + "gene_synonym", + "NP_416300.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76237" + ], + [ + "gene_synonym", + "b1786" + ], + [ + "gene_synonym", + "yeaJ" + ] + ], + "dna_sequence": "ATGAAATTGCACCATAGAATGCTCCGGCATTTTATCGCCGCAAGTGTCATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGAACAGCGGCGCGCCATCTGCGAGGCTTTTGAGTCTGCCAATAACACCCATGGCTTAAACCTGACTGCCCATAAATACCCGGGCTTACGCGGCACACTACAAACCGCATCCACTGACTGCGACACAATTGTGGAAGCTGCAGCACTATTACCCGCTTTTGATCAGGCAGTGGAAGGCAACCGCCACCAGGATGATTACGGTTCAGGTCTTGGGATGGCCGAAGAGAAATTTCACTATTATCTCGATCTCAATGACCGCTATGTCTATTTTTATGAGCCGGTTAATGTTGAATACTTTGCGATGAATAACTGGTCCTTCCTGCAGTCAGGAAGTATTGGCATCGATCGCAAAGATATTGAAAAGGTATTTACCGGGCGTACCGTATTGTCGAGCATTTACCAGGATCAGCGTACTAAACAGAACGTGATGAGTTTGCTGACGCCGGTATATGTCGCAGGGCAGCTAAAAGGGATTGTGCTGCTGGATATTAACAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCGTTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCGCAAATTGCAGCACAACTGCCTGAACGTATCGAAAAACGTCTGCAACATATCGCGCCGCAGAAAGAGATCGGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGA", + "dna_sequence_length": 1491, + "functions": [ + "putative diguanylate cyclase" + ], + "id": "CDS_1775", + "location": [ + [ + "NC_000913", + 1872041, + "+", + 1491 + ] + ], + "md5": "211b91713363435a43d743fe78d31a93", + "parent_gene": "", + "protein_md5": "ce5689cd00b5ab7203100f59fffa568a", + "protein_translation": "MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS", + "protein_translation_length": 496, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005945" + ], + [ + "gene_synonym", + "ECK1785" + ], + [ + "gene_synonym", + "EcoGene:EG13497" + ], + [ + "gene_synonym", + "GI:16129741" + ], + [ + "gene_synonym", + "GeneID:946303" + ], + [ + "gene_synonym", + "JW1776" + ], + [ + "gene_synonym", + "NP_416301.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64483" + ], + [ + "gene_synonym", + "b1787" + ], + [ + "gene_synonym", + "yeaK" + ] + ], + "dna_sequence": "ATGACTGAAATGGCTAAAGGAAGCGTGACGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCACTGGTATGTAAAGTCAAAGGCAATGGCGTAAATCAACATGTTCTGGCGATCCTCGCAGCCGATCAACAGGCCGATCTGAGCCAACTCGCCAGCCATATAGGCGGATTACGCGCTTCGTTGGCCAGCCCGGCGGAAGTCGATGAACTCACAGGCTGTGTCTTCGGCGCGATCCCCCCTTTCAGCTTCCATCCAAAACTCAAACTGGTTGCCGACCCTCTACTCTTCGAACGATTTGATGAAATCGCCTTCAATGCAGGCATGCTGGATAAATCCGTTATTTTGAAAACCGCGGATTATTTGCGCATTGCGCAACCAGAACTGGTCAATTTCCGCCGCACTGCGTAA", + "dna_sequence_length": 504, + "functions": [ + "aminoacyl-tRNA editing domain protein" + ], + "id": "CDS_1776", + "location": [ + [ + "NC_000913", + 1873574, + "+", + 504 + ] + ], + "md5": "76352abbdc7e7e796f40c9675b1bc02d", + "parent_gene": "", + "protein_md5": "2da1b3dbc2fdda86bf9b48e45087b1d6", + "protein_translation": "MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005947" + ], + [ + "gene_synonym", + "ECK4472" + ], + [ + "gene_synonym", + "EcoGene:EG14417" + ], + [ + "gene_synonym", + "GI:90111332" + ], + [ + "gene_synonym", + "GeneID:946294" + ], + [ + "gene_synonym", + "NP_416302.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76239" + ], + [ + "gene_synonym", + "b1788" + ], + [ + "gene_synonym", + "yoaI" + ] + ], + "dna_sequence": "ATGAACGATCAAATGTTTGTCGAGACACTGATTATCACGTCATCGTTTTTTGCCATTGCTGTTGTACTGGTTTTGTCCGTTCTTCTTATCGAACGGACCGGCTAG", + "dna_sequence_length": 105, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1777", + "location": [ + [ + "NC_000913", + 1874182, + "-", + 105 + ] + ], + "md5": "1011216d2370f04c40e12b64b54c1b91", + "parent_gene": "", + "protein_md5": "a184f9f606b45cd38e272eb64439272d", + "protein_translation": "MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG", + "protein_translation_length": 34, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005954" + ], + [ + "gene_synonym", + "ECK1787" + ], + [ + "gene_synonym", + "EcoGene:EG13498" + ], + [ + "gene_synonym", + "GI:16129743" + ], + [ + "gene_synonym", + "GeneID:946307" + ], + [ + "gene_synonym", + "JW1778" + ], + [ + "gene_synonym", + "NP_416303.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY6" + ], + [ + "gene_synonym", + "b1789" + ], + [ + "gene_synonym", + "yeaL" + ] + ], + "dna_sequence": "ATGTTTGATGTCACTTTGCTGATCCTGCTCGGGTTAGCTGCGCTGGGCTTTATCAGTCATAACACCACTGTCGCCGTTTCAATTCTGGTGTTAATCATTGTCCGCGTCACACCGTTAAGCACCTTTTTTCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCCCCCATCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTGGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCGCTGTTTCGCGGCGTACCGGTTGGGCCGCTTATTGCCGCGGGTCTGGTTTCGCTGATTGTGGGGAAACAGTAG", + "dna_sequence_length": 447, + "functions": [ + "UPF0756 family putative inner membrane protein" + ], + "id": "CDS_1778", + "location": [ + [ + "NC_000913", + 1874352, + "+", + 447 + ] + ], + "md5": "899cdef03d780eb6d78d9845c6176f63", + "parent_gene": "", + "protein_md5": "359cc2ab9a43705c447cacc1a5617997", + "protein_translation": "MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFPWIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRGVTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005956" + ], + [ + "gene_synonym", + "ECK1788" + ], + [ + "gene_synonym", + "EcoGene:EG13499" + ], + [ + "gene_synonym", + "GI:16129744" + ], + [ + "gene_synonym", + "GeneID:946590" + ], + [ + "gene_synonym", + "JW1779" + ], + [ + "gene_synonym", + "NP_416304.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76241" + ], + [ + "gene_synonym", + "b1790" + ], + [ + "gene_synonym", + "yeaM" + ] + ], + "dna_sequence": "ATGATGCACAGGTTGAATCTCAATGGCTATGAACCCGACCGACACCATGAAGCCGCGGTCGCATTTTGTATTCACGCCGGAACGGATGAGTTAACCAGTCCTGTACATCAGCACCGCAAAGGACAGCTGATACTGGCGCTACATGGTGCAATTACCTGTACGGTGGAAAATGCTTTGTGGATGGTGCCGCCACAATATGCGGTTTGGATACCGGGCGGGGTGGAACATAGCAATCAAGTAACAGCTAATGCTGAACTCTGTTTTCTGTTTATCGAACCCAGCGCAGTGACAATGCCGACAACATGTTGCACATTGAAAATATCGCCCTTATGCCGGGAATTAATTTTAACCCTGGCAAACAGGACGACGACTCAGCGTGCTGAGCCAATGACCCGCAGATTAATTCAGGTCCTGTTTGATGAACTCCCTCAGCAGCCACAACAACAGCTGCACCTGCCCGTTTCTTCTCATCCTAAAATCCGCACGATGGTGGAGATGATGGCGAAAGGGCCTGTCGAGTGGGGGGCATTGGGGCAATGGGCTGGCTTTTTTGCGATGAGTGAACGCAATCTTGCCCGACTGATAGTAAAAGAGACGGGGTTGAGTTTTCGCCAGTGGCGTCAGCAGTTACAGCTGATTATGGCGCTTCAGGGATTAGTGAAAGGCGATACTGTACAGAAAGTTGCTCATACGCTGGGGTATGATTCAACAACGGCCTTTATTACTATGTTTAAGAAAGGCCTGGGGCAAACGCCAGGCCGATATATTGCGAGATTAACTACTGTTTCCCCACAATCAGCGAAACCAGACCCGCGGCAATAA", + "dna_sequence_length": 822, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1779", + "location": [ + [ + "NC_000913", + 1875576, + "-", + 822 + ] + ], + "md5": "2d70d60ca9ba619409074a9f578fd267", + "parent_gene": "", + "protein_md5": "e173fee78fd5016f2790d2d6e479eb65", + "protein_translation": "MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005962" + ], + [ + "gene_synonym", + "ECK1789" + ], + [ + "gene_synonym", + "EcoGene:EG13500" + ], + [ + "gene_synonym", + "GI:16129745" + ], + [ + "gene_synonym", + "GeneID:946309" + ], + [ + "gene_synonym", + "JW1780" + ], + [ + "gene_synonym", + "NP_416305.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76242" + ], + [ + "gene_synonym", + "b1791" + ], + [ + "gene_synonym", + "yeaN" + ] + ], + "dna_sequence": "ATGACCTGTTCAACTTCATTAAGCGGCAAAAACAGGATTGTCCTTATCGCTGGCATTCTGATGATTGCCACAACATTACGCGTCACCTTTACCGGCGCAGCACCGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATACTCGGGGTATCTGGCGTTCACCGCTTGCCTGGCAGGTCACATTGTTTCTTGGGATCAACTCACTGGTCTATTACGTGATTATTGGCTGGCTTCCGGCGATCCTCATCAGTCACGGCTATAGCGAAGCACAGGCGGGTTCACTGCATGGTTTGCTGCAACTAGCCACAGCAGCACCCGGTTTGCTGATCCCACTTTTCTTACATCATGTGAAAGATCAGCGTGGTATTGCAGCGTTCGTTGCCTTGATGTGCGCAGTGGGCGCGGTTGGGCTCTGCTTTATGCCAGCGCACGCGATCACCTGGACTCTGCTTTTCGGTTTTGGTTCCGGCGCAACAATGATACTGGGGTTGACGTTCATTGGTCTGCGGGCTAGTTCTGCGCATCAGGCGGCGGCACTCTCGGGGATGGCACAATCCGTCGGGTATTTGTTGGCAGCCTGTGGGCCGCCGCTGATGGGTAAAATACACGATGCTAACGGTAACTGGTCTGTACCACTTATGGGTGTTGCCATACTTTCACTACTGATGGCGATTTTCGGACTTTGCGCCGGGAGAGACAAAGAAATTCGCTAA", + "dna_sequence_length": 1182, + "functions": [ + "putative MFS transporter, inner membrane protein" + ], + "id": "CDS_1780", + "location": [ + [ + "NC_000913", + 1875673, + "+", + 1182 + ] + ], + "md5": "59bba76ac00136f344c0f3d68b8a945d", + "parent_gene": "", + "protein_md5": "7712dd7f08af42f280e755248cd9f3ac", + "protein_translation": "MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEIR", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005964" + ], + [ + "gene_synonym", + "ECK1790" + ], + [ + "gene_synonym", + "EcoGene:EG13501" + ], + [ + "gene_synonym", + "GI:90111333" + ], + [ + "gene_synonym", + "GeneID:945675" + ], + [ + "gene_synonym", + "JW1781" + ], + [ + "gene_synonym", + "NP_416306.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76243" + ], + [ + "gene_synonym", + "b1792" + ], + [ + "gene_synonym", + "yeaO" + ] + ], + "dna_sequence": "ATGAATATTCAGTGCAAACGCGTTTATGATCCGGCTGAACAGAGCGATGGTTATCGCATACTGGTCGACCGCCTCTGGCCGCGCGGTATCAAAAAAACCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGA", + "dna_sequence_length": 348, + "functions": [ + "DUF488 family protein" + ], + "id": "CDS_1781", + "location": [ + [ + "NC_000913", + 1876909, + "+", + 348 + ] + ], + "md5": "9ed2c65e258cce574e5e3e361cc30262", + "parent_gene": "", + "protein_md5": "2c3b8950ae2804cb881e39a1162f1c3d", + "protein_translation": "MNIQCKRVYDPAEQSDGYRILVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVDYATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYSAKNTTQNHALVLADWLRSL", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005966" + ], + [ + "gene_synonym", + "ECK1791" + ], + [ + "gene_synonym", + "EcoGene:EG14304" + ], + [ + "gene_synonym", + "GI:16129747" + ], + [ + "gene_synonym", + "GeneID:946310" + ], + [ + "gene_synonym", + "JW1782" + ], + [ + "gene_synonym", + "NP_416307.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64493" + ], + [ + "gene_synonym", + "b1793" + ], + [ + "gene_synonym", + "yoaF" + ] + ], + "dna_sequence": "ATGAAAATTATCAGTTTTGTTCTGCCTTGCTTGCTGGTCCTGGCTGGTTGTTCAACCCCTTCTCAGCCAGAAGCACCTAAACCGCCGCAGATTGGTATGGCAAATCCGGCGTCGGTCTATTGCCAGCAGAAGGGCGGGACGCTCATTCCAGTGCAGACAGCGCAAGGGGTCAGCAACAATTGCAAATTACCGGGCGGTGAAACGATTGATGAATGGGCATTGTGGCGGCGTGACCATCCGGCTGGTGAAAAATAA", + "dna_sequence_length": 255, + "functions": [ + "DUF333 family outer membrane lipoprotein" + ], + "id": "CDS_1782", + "location": [ + [ + "NC_000913", + 1877532, + "-", + 255 + ] + ], + "md5": "a1aa5a2a59314d1655c25dc41c970d1c", + "parent_gene": "", + "protein_md5": "9ecc1d8c1c619afd50682cff8e257c4f", + "protein_translation": "MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005972" + ], + [ + "gene_synonym", + "ECK1792" + ], + [ + "gene_synonym", + "EcoGene:EG13502" + ], + [ + "gene_synonym", + "GI:90111334" + ], + [ + "gene_synonym", + "GeneID:948969" + ], + [ + "gene_synonym", + "JW5292" + ], + [ + "gene_synonym", + "NP_416308.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76245" + ], + [ + "gene_synonym", + "b1794" + ], + [ + "gene_synonym", + "yeaP" + ] + ], + "dna_sequence": "GTGTCAGATCAGATTATCGCCCGCGTCTCGCAATCCCTTGCCAAAGAACAGTCACTGGAAAGTCTGGTCCGACAGCTTCTGGAGATGCTGGAAATGGTCACTGATATGGAATCAACCTACCTGACCAAAGTGGATGTCGAAGCGCGCCTGCAGCATATTATGTTTGCCCGTAACAGCCAGAAAATGTACATCCCGGAGAATTTTACCGTCTCGTGGGATTACTCGTTATGCAAACGCGCCATTGATGAAAACTGCTTTTTCAGCGATGAAGTCCCCGACCGTTGGGGTGACTGTATTGCGGCACGCAATCTTGGCATCACCACATTTCTGAGCACGCCAATTCACTTACCGGATGGATCATTCTATGGCACGCTTTGCGCCGCCAGCAGTGAGAAGCGCCAGTGGAGTGAACGCGCGGAACAGGTTTTACAGTTATTCGCCGGACTGATTGCACAATATATTCAAAAAGAGGCACTGGTTGAACAGCTGCGCGAAGCCAATGCTGCGCTGATTGCGCAATCGTATACCGACTCGTTAACCGGGCTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAATCAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATTTCGTCGCTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGA", + "dna_sequence_length": 1026, + "functions": [ + "diguanylate cyclase" + ], + "id": "CDS_1783", + "location": [ + [ + "NC_000913", + 1877715, + "+", + 1026 + ] + ], + "md5": "5e709dc4ad76199414cdf3ceb9b767b4", + "parent_gene": "", + "protein_md5": "6d6f99903f9c5eb3c933d00a32a180d4", + "protein_translation": "MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4491" + ], + [ + "gene_synonym", + "EcoGene:EG14481" + ], + [ + "gene_synonym", + "GI:226524722" + ], + [ + "gene_synonym", + "GeneID:7751647" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P602" + ], + [ + "gene_synonym", + "YP_002791242.1" + ], + [ + "gene_synonym", + "b4676" + ], + [ + "gene_synonym", + "yoaK" + ] + ], + "dna_sequence": "ATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAA", + "dna_sequence_length": 99, + "functions": [ + "inner membrane-associated protein" + ], + "id": "CDS_1784", + "location": [ + [ + "NC_000913", + 1878773, + "+", + 99 + ] + ], + "md5": "9295e6f08e825a3bd8e892071fb70630", + "parent_gene": "", + "protein_md5": "96de30957245213b2465773daab35607", + "protein_translation": "MRIGIIFPVVIFITAVVFLAWFFIGGYAAPGA", + "protein_translation_length": 32, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4490" + ], + [ + "gene_synonym", + "EcoGene:EG14480" + ], + [ + "gene_synonym", + "GI:226524723" + ], + [ + "gene_synonym", + "GeneID:7751648" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P603" + ], + [ + "gene_synonym", + "YP_002791243.1" + ], + [ + "gene_synonym", + "b4675" + ], + [ + "gene_synonym", + "yoaJ" + ] + ], + "dna_sequence": "ATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCACTGAGCTGGGATGGTGGTAA", + "dna_sequence_length": 75, + "functions": [ + "inner membrane-associated protein" + ], + "id": "CDS_1785", + "location": [ + [ + "NC_000913", + 1878874, + "+", + 75 + ] + ], + "md5": "e5c23f0affd6ca15f64e8705249e614d", + "parent_gene": "", + "protein_md5": "6a811a69b052b7d48e5334a525168608", + "protein_translation": "MKKTTIIMMGVAIIVVLGTELGWW", + "protein_translation_length": 24, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005974" + ], + [ + "gene_synonym", + "ECK1793" + ], + [ + "gene_synonym", + "EcoGene:EG13503" + ], + [ + "gene_synonym", + "GI:16129749" + ], + [ + "gene_synonym", + "GeneID:946311" + ], + [ + "gene_synonym", + "JW1784" + ], + [ + "gene_synonym", + "NP_416309.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64485" + ], + [ + "gene_synonym", + "b1795" + ], + [ + "gene_synonym", + "yeaQ" + ] + ], + "dna_sequence": "ATGGGCATTCTGTCATGGATTATTTTTGGGCTTATTGCCGGTATTCTGGCGAAGTGGATCATGCCAGGTAAAGATGGAGGTGGATTCTTTATGACTATCCTGCTGGGGATAGTCGGTGCCGTAGTCGGCGGATGGATCAGCACGCTGTTTGGCTTTGGTAAAGTCGATGGCTTCAATTTTGGCAGCTTCGTGGTTGCCGTTATTGGTGCGATTGTCGTGCTATTTATCTACAGGAAGATTAAAAGTTAA", + "dna_sequence_length": 249, + "functions": [ + "UPF0410 family protein" + ], + "id": "CDS_1786", + "location": [ + [ + "NC_000913", + 1879255, + "-", + 249 + ] + ], + "md5": "785045a8fef97e39b968597ce61f70e7", + "parent_gene": "", + "protein_md5": "455f98bebfeb521aa6aa9acd749a3b4e", + "protein_translation": "MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005976" + ], + [ + "gene_synonym", + "ECK1794" + ], + [ + "gene_synonym", + "EcoGene:EG14305" + ], + [ + "gene_synonym", + "GI:16129750" + ], + [ + "gene_synonym", + "GeneID:946314" + ], + [ + "gene_synonym", + "JW1785" + ], + [ + "gene_synonym", + "NP_416310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64496" + ], + [ + "gene_synonym", + "b1796" + ], + [ + "gene_synonym", + "yoaG" + ] + ], + "dna_sequence": "ATGGGCAAAGCAACGTATACCGTGACCGTCACCAATAACAGCAATGGCGTTTCTGTCGATTATGAAACAGAGACGCCGATGACTTTGCTGGTGCCAGAAGTGGCGGCTGAAGTGATAAAAGATCTGGTGAATACCGTACGTTCTTATGACACGGAAAACGAACATGATGTTTGTGGTTGGTAA", + "dna_sequence_length": 183, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1787", + "location": [ + [ + "NC_000913", + 1879585, + "-", + 183 + ] + ], + "md5": "f71bb27c048561f6c495ecae30e0d568", + "parent_gene": "", + "protein_md5": "6b2a44725c222898af8834d81fe2c51f", + "protein_translation": "MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVNTVRSYDTENEHDVCGW", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005979" + ], + [ + "gene_synonym", + "ECK1795" + ], + [ + "gene_synonym", + "EcoGene:EG13504" + ], + [ + "gene_synonym", + "GI:16129751" + ], + [ + "gene_synonym", + "GeneID:946317" + ], + [ + "gene_synonym", + "JW1786" + ], + [ + "gene_synonym", + "NP_416311.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64488" + ], + [ + "gene_synonym", + "b1797" + ], + [ + "gene_synonym", + "yeaR" + ] + ], + "dna_sequence": "ATGCTTCAAATCCCACAGAATTATATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCACCTGCCGGAATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCACGCCTTTCCGTTATGCATGGGGCGGTCAAATATCTCGGCTACGCTGATGAACACAGTGCAGAGCCTGATCAGGTGATCCTTATCGAAGCGGGGCAGTTTGCGGTGTTCCCTCCAGAAAAGTGGCACAACATTGAAGCCATGACTGACGATACTTATTTCAACATTGACTTCTTCGTGGCTCCTGAAGTCCTGATGGAAGGTGCGCAACAACGGAAAGTCATTCATAACGGGAAATGA", + "dna_sequence_length": 360, + "functions": [ + "DUF1971 family protein, nitrate-inducible" + ], + "id": "CDS_1788", + "location": [ + [ + "NC_000913", + 1879948, + "-", + 360 + ] + ], + "md5": "03ddc06a2c9886aa494a025eab764880", + "parent_gene": "", + "protein_md5": "baa4308cec92c44ae312c56d9e35f7bc", + "protein_translation": "MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005984" + ], + [ + "gene_synonym", + "ECK1796" + ], + [ + "gene_synonym", + "EcoGene:EG13505" + ], + [ + "gene_synonym", + "GI:16129752" + ], + [ + "gene_synonym", + "GeneID:946157" + ], + [ + "gene_synonym", + "JW1787" + ], + [ + "gene_synonym", + "NP_416312.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76249" + ], + [ + "gene_synonym", + "b1798" + ], + [ + "gene_synonym", + "leuE" + ], + [ + "gene_synonym", + "yeaS" + ] + ], + "dna_sequence": "GTGTTCGCTGAATACGGGGTTCTGAATTACTGGACCTATCTGGTTGGGGCCATTTTTATTGTGTTGGTGCCAGGGCCAAATACCCTGTTTGTACTCAAAAATAGCGTCAGTAGCGGTATGAAAGGCGGTTATCTTGCGGCCTGCGGTGTATTTATTGGCGATGCGGTATTGATGTTTCTGGCATGGGCTGGAGTGGCGACATTAATTAAGACCACCCCGATATTATTCAACATTGTACGTTATCTTGGTGCGTTTTATTTGCTCTATCTGGGGAGTAAAATTCTTTACGCGACCCTGAAGGGTAAAAATAGCGAGGCCAAATCCGATGAGCCCCAATACGGTGCTATTTTTAAACGCGCGTTAATTTTGAGCCTGACTAATCCGAAAGCCATTTTGTTCTATGTGTCGTTTTTCGTACAGTTTATCGATGTTAATGCCCCACATACGGGAATTTCATTCTTTATTCTGGCGGCGACGCTGGAACTGGTGAGTTTCTGCTATTTGAGCTTCCTGATTATATCTGGTGCTTTTGTCACGCAGTACATACGTACCAAAAAGAAACTGGCTAAAGTTGGCAACTCACTGATTGGTTTGATGTTCGTGGGTTTCGCTGCCCGACTGGCGACGCTGCAATCCTGA", + "dna_sequence_length": 639, + "functions": [ + "leucine efflux protein" + ], + "id": "CDS_1789", + "location": [ + [ + "NC_000913", + 1880759, + "-", + 639 + ] + ], + "md5": "2496790d48da44d0fe6553ba271af72e", + "parent_gene": "", + "protein_md5": "ada8bc7ac692e7f98368a4bad0e90ef1", + "protein_translation": "MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGKNSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILAATLELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005987" + ], + [ + "gene_synonym", + "ECK1797" + ], + [ + "gene_synonym", + "EcoGene:EG13506" + ], + [ + "gene_synonym", + "GI:90111335" + ], + [ + "gene_synonym", + "GeneID:946316" + ], + [ + "gene_synonym", + "JW1788" + ], + [ + "gene_synonym", + "NP_416313.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76250" + ], + [ + "gene_synonym", + "b1799" + ], + [ + "gene_synonym", + "dmlR" + ], + [ + "gene_synonym", + "yeaT" + ] + ], + "dna_sequence": "ATGAATAATTTACCGCTGCTGAATGATTTGCGCGTCTTTATGCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCAAGCGCATCGCCTTGCTGGAGCAAACGCTAAACGTGGTGTTGTTACACCGCACCACCCGCCGCGTCACCATTACCGAAGAAGGAGAGCGGATTTATGAATGGGCGCAGCGGATTTTGCAGGATGTCGGTCAGATGATGGACGAACTTTCTGACGTGCGTCAGGTGCCGCAGGGGATGCTGCGTATTATCAGCAGCTTTGGTTTTGGACGACAGGTGGTGGCTCCGGCGTTATTAGCGCTGGCGAAGGCGTATCCGCAACTGGAATTACGTTTTGATGTGGAAGACCGACTGGTCGATTTGGTCAATGAAGGTGTCGATCTCGATATTCGCATTGGCGATGACATCGCCCCTAATTTAATCGCCCGCAAACTGGCGACCAATTACCGTATTCTCTGCGCGTCGCCGGAATTTATTGCGCAACATGGCGCGCCGAAACATTTAACCGATCTTTCTGCATTGCCGTGCCTGGTCATTAAAGAGCGCGATCATCCTTTTGGTGTCTGGCAATTACGCAATAAAGAAGGCCCCCATGCGATTAAAGTCACCGGCCCACTGTCGTCTAATCATGGAGAAATTGTCCATCAGTGGTGTCTCGATGGGCAGGGGATTGCTCTGCGTTCCTGGTGGGATGTTAGCGAAAACATTGCCAGTGGTCATTTAGTGCAAGTGCTACCGGAATATTACCAGCCAGCGAACGTCTGGGCCGTTTATGTTTCAAGGCTGGCGACGTCAGCGAAAGTGCGGATAACGGTAGAATTTTTACGCCAGTATTTTGCCGAGCACTACCCGAATTTTTCACTGGAGCATGCCTGA", + "dna_sequence_length": 924, + "functions": [ + "transcriptional activator of dmlA" + ], + "id": "CDS_1790", + "location": [ + [ + "NC_000913", + 1881809, + "-", + 924 + ] + ], + "md5": "b4e71098c7d8f8461fac5c3eebc26cb1", + "parent_gene": "", + "protein_md5": "672e56be62df4db0b4e7aeebbac33972", + "protein_translation": "MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQYFAEHYPNFSLEHA", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005991" + ], + [ + "gene_synonym", + "ECK1798" + ], + [ + "gene_synonym", + "EcoGene:EG13507" + ], + [ + "gene_synonym", + "GI:16129754" + ], + [ + "gene_synonym", + "GeneID:946319" + ], + [ + "gene_synonym", + "JW1789" + ], + [ + "gene_synonym", + "NP_416314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76251" + ], + [ + "gene_synonym", + "b1800" + ], + [ + "gene_synonym", + "dmlA" + ], + [ + "gene_synonym", + "yeaU" + ] + ], + "dna_sequence": "ATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTTGTGGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCAACCTGCGCCCGGTTCGTCTCTTTCCTGGCGTTCCCTGCCCGCTGGCGGGAAAACAGCCTGGCGACATCGATTTTTACGTGGTCAGGGAAAACACCGAAGGCGAATATTCCTCGCTCGGCGGTAGAGTGAATGAAGGTACAGAGCATGAAGTCGTCATTCAGGAATCGGTATTTACCCGCCGTGGTGTCGATCGCATTTTGCGTTATGCCTTCGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGATGCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTGCTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTTTCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAA", + "dna_sequence_length": 1086, + "functions": [ + "D-malate oxidase, NAD-dependent", + "putative tartrate dehydrogenase" + ], + "id": "CDS_1791", + "location": [ + [ + "NC_000913", + 1881912, + "+", + 1086 + ] + ], + "md5": "940f95e23eac0d64996216a0549995a0", + "parent_gene": "", + "protein_md5": "e48d1c1f351c266723f9809664d91861", + "protein_translation": "MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQMEWASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQESVFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRWDKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIAHGPKTPDMKGNATTPQVADAICKIILR", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005995" + ], + [ + "gene_synonym", + "ECK1799" + ], + [ + "gene_synonym", + "EcoGene:EG13508" + ], + [ + "gene_synonym", + "GI:16129755" + ], + [ + "gene_synonym", + "GeneID:947326" + ], + [ + "gene_synonym", + "JW5293" + ], + [ + "gene_synonym", + "NP_416315.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD1" + ], + [ + "gene_synonym", + "b1801" + ], + [ + "gene_synonym", + "yeaV" + ] + ], + "dna_sequence": "TTGGTTTTGCTGGCAATGGGACTGGTGATTTATTTAGCCACCAGTAAATACGGCAATATTCGTCTTGGCGAAGGAAAACCGGAATACAGCACGCTCTCCTGGCTGTTTATGTTTATTTGTGCCGGTTTAGGTTCTTCTACGCTTTATTGGGGGGTTGCTGAATGGGCCTATTATTATCAAACACCTGGATTAAATATCGCACCGCGTTCACAACAGGCACTCGAATTTAGCGTTCCCTACTCTTTCTTCCACTGGGGCATCAGCGCCTGGGCAACTTATACGCTGGCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTTCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCTTGTTGTTACCGCAGCAACCTTTACCCGTGGGCTTTCCGCGCTGACCGGTTTACCCGATAACTTCACCGTGCAGGCATTTGTGATCCTGCTTTCCGGCGGCATTTTTTGCCTAAGCTCGTGGATTGGTATCAACAACGGTTTGCAACGTCTGAGCAAAATGGTTGGCTGGGGCGCGTTCCTGCTGCCATTACTGGTGCTGATTGTCGGCCCAACCGAATTTATTACCAACAGCATCATCAATGCCATCGGCCTGACCACGCAAAACTTCCTGCAAATGAGCTTATTCACCGATCCGCTTGGCGATGGTTCATTTACCCGCAACTGGACCGTTTTCTACTGGCTGTGGTGGATCTCATACACCCCTGGCGTAGCAATGTTTGTCACCCGCGTTTCCCGCGGTCGTAAGATTAAAGAAGTTATCTGGGGACTGATCCTCGGCAGCACCGTCGGTTGCTGGTTCTTCTTTGGCGTAATGGAAAGCTATGCCATTCATCAGTTTATCAATGGCGTAATCAACGTCCCACAGGTGCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGAAAACCACCGTCGTGCTCACAGCCCTTCCCTTCCTCGTCATTTTACTGGTGAAAGTCGGCGGGTTTATTCGCTGGCTGAAACAGGATTACGCCGACATTCCGGCTCATCAAGTTGAACATTATCTCCCGCAGACACCGGTTGAAGCCCTGGAAAAAACGCCAGTGCTCCCTGCGGGAACCGTATTCAAAGGCGACAACTGA", + "dna_sequence_length": 1446, + "functions": [ + "putative transporter" + ], + "id": "CDS_1792", + "location": [ + [ + "NC_000913", + 1883188, + "+", + 1446 + ] + ], + "md5": "974f8bf8037f12dd23cf96a32eaa8e11", + "parent_gene": "", + "protein_md5": "cb9c619007fb2b7a96e1647ab9ab3453", + "protein_translation": "MVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQVEHYLPQTPVEALEKTPVLPAGTVFKGDN", + "protein_translation_length": 481, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005997" + ], + [ + "gene_synonym", + "ECK1800" + ], + [ + "gene_synonym", + "EcoGene:EG13509" + ], + [ + "gene_synonym", + "GI:16129756" + ], + [ + "gene_synonym", + "GeneID:946325" + ], + [ + "gene_synonym", + "JW5294" + ], + [ + "gene_synonym", + "NP_416316.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABR7" + ], + [ + "gene_synonym", + "b1802" + ], + [ + "gene_synonym", + "yeaW" + ] + ], + "dna_sequence": "ATGAGCAATCTGAGCCCTGACTTTGTACTACCCGAAAATTTTTGCGCTAACCCGCAAGAGGCGTGGACCATTCCTGCCCGTTTTTATACCGATCAGAACGCGTTTGAACACGAAAAAGAGAACGTCTTCGCCAAAAGCTGGATTTGCGTCGCTCACAGCAGCGAACTGGCGAATGCCAATGATTATGTGACGCGTGAGATCATTGGCGAAAGCATCGTGCTGGTACGCGGTCGTGATAAGGTTTTGCGCGCGTTCTATAACGTGTGTCCGCACCGTGGTCATCAGTTGTTGAGCGGTGAAGGAAAAGCAAAAAATGTGATTACCTGCCCGTATCACGCATGGGCATTCAAACTCGATGGCAACCTGGCCCATGCACGTAACTGCGAAAACGTCGCCAATTTCGATAGCGACAAAGCGCAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAACATTGTCGATAACTATCTCGAGTGCTATCACTGTGGTCCGGCGCATCCAGGTTTCTCCGACTCCGTACAGGTTGATCGTTACTGGCACACCATGCACGGTAACTGGACGCTGCAATACGGTTTCGCCAAACCGTCCGAACAGTCGTTTAAATTTGAAGAGGGTACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGTGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCGTACAGAAAGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAA", + "dna_sequence_length": 1125, + "functions": [ + "putative YeaWX dioxygenase alpha subunit", + "2Fe-2S cluster" + ], + "id": "CDS_1793", + "location": [ + [ + "NC_000913", + 1884665, + "+", + 1125 + ] + ], + "md5": "937a5cda213edf8607c77ab002ecfeb6", + "parent_gene": "", + "protein_md5": "a1e13d4fd33cd72e46823f303631fee3", + "protein_translation": "MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD", + "protein_translation_length": 374, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006000" + ], + [ + "gene_synonym", + "ECK1801" + ], + [ + "gene_synonym", + "EcoGene:EG13510" + ], + [ + "gene_synonym", + "GI:16129757" + ], + [ + "gene_synonym", + "GeneID:946329" + ], + [ + "gene_synonym", + "JW1792" + ], + [ + "gene_synonym", + "NP_416317.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76254" + ], + [ + "gene_synonym", + "b1803" + ], + [ + "gene_synonym", + "yeaX" + ] + ], + "dna_sequence": "ATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCTGCGTTTACCGGAGGAAGTCACGTCATTGTGCAGATGAGCGATGGTGATAACCAGTACAGCAATGCGTATTCACTACTGAGTTCGCCGCATGACACCTCTTGTTATCAGATTGCCGTTCGGCTGGAGGAAAACTCGCGCGGCGGTTCCCGCTTTTTGCATCAGCAGGTAAAAGTGGGCGATCGGTTAACGATTTCAACGCCTAATAACCTGTTTGCGCTAATTCCCTCAGCCAGAAAGCATCTGTTTATCGCGGGCGGTATTGGTATCACCCCTTTCCTGTCGCACATGGCAGAGCTGCAACACAGCGACGTCGACTGGCAGCTACATTACTGCTCGCGAAATCCAGAAAGTTGCGCATTTCGTGATGAGCTAGTCCAGCATCCGCAGGCTGAGAAAGTCCATTTGCATCATTCATCAACCGGAACACGACTGGAATTAGCGCGATTATTGGCGGATATCGAACCTGGCACACACGTTTATACCTGTGGCCCCGAGGCGCTAATTGAAGCGGTAAGAAGTGAAGCTGCGCGTCTGGACATCGCCGCCGATACGCTGCACTTTGAGCAATTTGCTATCGAAGACAAAACCGGCGATGCATTTACCCTGGTGCTTGCCCGTTCCGGAAAAGAGTTTGTGGTGCCGGAAGAGATGACTATTTTGCAGGTTATTGAAAATAATAAAGCCGCGAAAGTGGAATGTTTATGTCGTGAAGGGGTATGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAG", + "dna_sequence_length": 966, + "functions": [ + "putative YeaWX dioxygenase beta subunit, reductase component" + ], + "id": "CDS_1794", + "location": [ + [ + "NC_000913", + 1885845, + "+", + 966 + ] + ], + "md5": "5bacd60a43c952aab02a575a738cdb22", + "parent_gene": "", + "protein_md5": "8547023f8745fbec8a492bb1f27c22fc", + "protein_translation": "MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAADTLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006003" + ], + [ + "gene_synonym", + "ECK1802" + ], + [ + "gene_synonym", + "EcoGene:EG10858" + ], + [ + "gene_synonym", + "GI:16129758" + ], + [ + "gene_synonym", + "GeneID:946328" + ], + [ + "gene_synonym", + "JW1793" + ], + [ + "gene_synonym", + "NP_416318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09155" + ], + [ + "gene_synonym", + "b1804" + ], + [ + "gene_synonym", + "rnd" + ] + ], + "dna_sequence": "TTGAATTACCAAATGATTACCACGGACGATGCGCTGGCTTCTTTGTGTGAAGCCGTCCGTGCCTTTCCGGCGATAGCCCTGGATACTGAATTTGTTCGTACGCGCACTTATTACCCGCAGCTGGGGTTGATTCAACTTTTCGATGGCGAGCATCTGGCGCTAATCGATCCACTCGGGATCACCGACTGGTCACCGCTGAAAGCGATCCTGCGCGATCCGTCCATCACAAAATTTCTCCATGCAGGCAGTGAAGATCTGGAAGTGTTCCTCAATGTCTTTGGCGAATTACCACAACCCTTGATTGACACGCAAATCCTTGCTGCCTTCTGCGGACGCCCGATGTCATGGGGTTTCGCTTCCATGGTGGAAGAGTATTCCGGCGTTACGCTGGACAAGAGTGAATCGCGCACCGACTGGCTGGCCAGACCGCTGACCGAACGTCAGTGTGAATACGCAGCGGCGGATGTCTGGTATCTGTTACCGATCACCGCCAAGCTTATGGTAGAAACGGAGGCCTCCGGCTGGCTACCTGCGGCGCTGGATGAATGCCGCCTGATGCAAATGCGTCGTCAGGAAGTCGTTGCGCCGGAAGATGCCTGGCGTGATATCACCAATGCCTGGCAATTACGCACACGCCAACTGGCCTGTCTGCAACTGTTAGCCGACTGGCGACTGCGCAAGGCGCGAGAGCGCGATCTGGCGGTGAACTTTGTCGTGCGTGAAGAGCATTTGTGGTCGGTAGCGCGTTATATGCCGGGAAGTTTAGGCGAACTGGACAGCCTGGGTTTATCCGGTAGCGAAATCCGCTTTCACGGTAAAACGCTGCTAGCGCTGGTGGAAAAAGCGCAGACATTGCCGGAAGATGCCTTACCGCAGCCGATGCTTAACCTGATGGACATGCCGGGTTATCGTAAAGCGTTTAAAGCGATTAAGTCGCTGATTACTGACGTGAGCGAAACGCATAAGATCAGCGCCGAATTGCTGGCATCGCGTCGGCAAATCAACCAACTGCTGAACTGGCACTGGAAACTGAAACCGCAGAACAATTTGCCGGAGCTGATTTCCGGCTGGCGTGGTGAGCTGATGGCGGAAGCATTACACAATTTATTGCAGGAATATCCGCAGTAA", + "dna_sequence_length": 1128, + "functions": [ + "ribonuclease D" + ], + "id": "CDS_1795", + "location": [ + [ + "NC_000913", + 1887991, + "-", + 1128 + ] + ], + "md5": "4e5adccd02603f42d43b7de69112d06e", + "parent_gene": "", + "protein_md5": "c8dc70a31151a1b806b3f6d21f68fdbf", + "protein_translation": "MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006005" + ], + [ + "gene_synonym", + "ECK1803" + ], + [ + "gene_synonym", + "EcoGene:EG11530" + ], + [ + "gene_synonym", + "GI:16129759" + ], + [ + "gene_synonym", + "GeneID:946327" + ], + [ + "gene_synonym", + "JW1794" + ], + [ + "gene_synonym", + "NP_416319.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69451" + ], + [ + "gene_synonym", + "b1805" + ], + [ + "gene_synonym", + "fadD" + ], + [ + "gene_synonym", + "oldD" + ] + ], + "dna_sequence": "TTGAAGAAGGTTTGGCTTAACCGTTATCCCGCGGACGTTCCGACGGAGATCAACCCTGACCGTTATCAATCTCTGGTAGATATGTTTGAGCAGTCGGTCGCGCGCTACGCCGATCAACCTGCGTTTGTGAATATGGGGGAGGTAATGACCTTCCGCAAGCTGGAAGAACGCAGTCGCGCGTTTGCCGCTTATTTGCAACAAGGGTTGGGGCTGAAGAAAGGCGATCGCGTTGCGTTGATGATGCCTAATTTATTGCAATATCCGGTGGCGCTGTTTGGCATTTTGCGTGCCGGGATGATCGTCGTAAACGTTAACCCGTTGTATACCCCGCGTGAGCTTGAGCATCAGCTTAACGATAGCGGCGCATCGGCGATTGTTATCGTGTCTAACTTTGCTCACACACTGGAAAAAGTGGTTGATAAAACCGCCGTTCAGCACGTAATTCTGACCCGTATGGGCGATCAGCTATCTACGGCAAAAGGCACGGTAGTCAATTTCGTTGTTAAATACATCAAGCGTTTGGTGCCGAAATACCATCTGCCAGATGCCATTTCATTTCGTAGCGCACTGCATAACGGCTACCGGATGCAGTACGTCAAACCCGAACTGGTGCCGGAAGATTTAGCTTTTCTGCAATACACCGGCGGCACCACTGGTGTGGCGAAAGGCGCGATGCTGACTCACCGCAATATGCTGGCGAACCTGGAACAGGTTAACGCGACCTATGGTCCGCTGTTGCATCCGGGCAAAGAGCTGGTGGTGACGGCGCTGCCGCTGTATCACATTTTTGCCCTGACCATTAACTGCCTGCTGTTTATCGAACTGGGTGGGCAGAACCTGCTTATCACTAACCCGCGCGATATTCCAGGGTTGGTAAAAGAGTTAGCGAAATATCCGTTTACCGCTATCACGGGCGTTAACACCTTGTTCAATGCGTTGCTGAACAATAAAGAGTTCCAGCAGCTGGATTTCTCCAGTCTGCATCTTTCCGCAGGCGGTGGGATGCCAGTGCAGCAAGTGGTGGCAGAGCGTTGGGTGAAACTGACCGGACAGTATCTGCTGGAAGGCTATGGCCTTACCGAGTGTGCGCCGCTGGTCAGCGTTAACCCATATGATATTGATTATCATAGTGGTAGCATCGGTTTGCCGGTGCCGTCGACGGAAGCCAAACTGGTGGATGATGATGATAATGAAGTACCACCAGGTCAACCGGGTGAGCTTTGTGTCAAAGGACCGCAGGTGATGCTGGGTTACTGGCAGCGTCCCGATGCTACCGATGAAATCATCAAAAATGGCTGGTTACACACCGGCGACATCGCGGTAATGGATGAAGAAGGATTCCTGCGCATTGTCGATCGTAAAAAAGACATGATTCTGGTTTCCGGTTTTAACGTCTATCCCAACGAGATTGAAGATGTCGTCATGCAGCATCCTGGCGTACAGGAAGTCGCGGCTGTTGGCGTACCTTCCGGCTCCAGTGGTGAAGCGGTGAAAATCTTCGTAGTGAAAAAAGATCCATCGCTTACCGAAGAGTCACTGGTGACTTTTTGCCGCCGTCAGCTCACGGGATACAAAGTACCGAAGCTGGTGGAGTTTCGTGATGAGTTACCGAAATCTAACGTCGGAAAAATTTTGCGACGAGAATTACGTGACGAAGCGCGCGGCAAAGTGGACAATAAAGCCTGA", + "dna_sequence_length": 1686, + "functions": [ + "acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)" + ], + "id": "CDS_1796", + "location": [ + [ + "NC_000913", + 1889746, + "-", + 1686 + ] + ], + "md5": "243e64b9c3bb8f638d231befd3d03527", + "parent_gene": "", + "protein_md5": "0b8f686eb1963da0365445b80a63570b", + "protein_translation": "MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA", + "protein_translation_length": 561, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006011" + ], + [ + "gene_synonym", + "ECK1804" + ], + [ + "gene_synonym", + "EcoGene:EG13511" + ], + [ + "gene_synonym", + "GI:16129760" + ], + [ + "gene_synonym", + "GeneID:946312" + ], + [ + "gene_synonym", + "JW1795" + ], + [ + "gene_synonym", + "NP_416320.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA91" + ], + [ + "gene_synonym", + "b1806" + ], + [ + "gene_synonym", + "yeaY" + ] + ], + "dna_sequence": "ATGGCGGTTCAAAAGAATGTTATCAAAGGCATACTGGCAGGTACGTTTGCGCTAATGCTGAGCGGTTGTGTCACTGTGCCGGACGCCATTAAAGGCAGCAGTCCCACGCCGCAACAAGATTTAGTTCGGGTGATGAGTGCGCCGCAGCTGTACGTTGGTCAGGAGGCACGCTTTGGTGGCAAAGTGGTTGCGGTACAAAACCAGCAAGGGAAAACTCGCCTGGAAATTGCTACCGTACCGCTGGACAGCGGAGCCAGACCGACGCTGGGAGAACCTTCTCGCGGTCGCATTTATGCCGATGTGAACGGTTTTCTGGACCCGGTGGATTTCCGTGGACAACTGGTTACGGTAGTCGGGCCAATCACTGGTGCGGTTGACGGCAAAATCGGCAATACGCCCTATAAATTTATGGTGATGCAAGTAACGGGTTACAAACGTTGGCATTTAACCCAGCAGGTGATTATGCCGCCTCAGCCGATTGATCCATGGTTTTATGGCGGTCGTGGCTGGCCCTATGGCTACGGCGGATGGGGCTGGTATAATCCCGGCCCCGCGAGAGTACAAACAGTTGTAACTGAATAA", + "dna_sequence_length": 582, + "functions": [ + "Slp family lipoprotein, RpoE-regulated" + ], + "id": "CDS_1797", + "location": [ + [ + "NC_000913", + 1890532, + "-", + 582 + ] + ], + "md5": "94bc17e6731763cc46a8e8b698159918", + "parent_gene": "", + "protein_md5": "e6576568a181edce2027623873528bdc", + "protein_translation": "MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006013" + ], + [ + "gene_synonym", + "ECK1805" + ], + [ + "gene_synonym", + "EcoGene:EG13512" + ], + [ + "gene_synonym", + "GI:16129761" + ], + [ + "gene_synonym", + "GeneID:946304" + ], + [ + "gene_synonym", + "JW1796" + ], + [ + "gene_synonym", + "NP_416321.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76256" + ], + [ + "gene_synonym", + "b1807" + ], + [ + "gene_synonym", + "rpf" + ], + [ + "gene_synonym", + "tsaB" + ], + [ + "gene_synonym", + "yeaZ" + ] + ], + "dna_sequence": "ATGCGAATTCTGGCTATCGATACCGCGACAGAGGCCTGCTCTGTCGCCCTGTGGAACGACGGTACTGTCAACGCTCATTTTGAGCTTTGCCCTCGTGAACATACTCAACGAATCTTACCGATGGTGCAGGATATCCTGACCACCAGCGGAACTTCCCTGACTGATATTAACGCTCTGGCTTACGGGCGCGGCCCCGGTAGCTTTACTGGCGTGCGCATTGGTATTGGCATCGCGCAAGGGCTGGCGCTTGGCGCGGAATTACCGATGATTGGCGTCTCCACGCTAATGACGATGGCGCAAGGGGCGTGGCGCAAAAACGGCGCAACCCGCGTGCTGGCAGCCATTGACGCGCGAATGGGCGAAGTTTACTGGGCCGAATATCAGCGTGATGAAAACGGTATCTGGCACGGTGAAGAAACCGAAGCCGTACTCAAACCCGAAATCGTCCATGAACGAATGCAACAGCTTTCCGGCGAATGGGTGACGGTAGGGACGGGCTGGCAAGCTTGGCCGGATCTCGGTAAAGAGAGCGGGCTGGTTTTGCGCGATGGCGAAGTGTTACTGCCTGCTGCTGAAGATATGCTGCCGATTGCGTGTCAGATGTTTGCTGAGGGTAAAACGGTGGCGGTGGAACATGCCGAACCGGTTTATTTACGTAACAACGTCGCATGGAAGAAACTTCCGGGCAAAGAATGA", + "dna_sequence_length": 696, + "functions": [ + "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein", + "binding partner and protease for TsaD" + ], + "id": "CDS_1798", + "location": [ + [ + "NC_000913", + 1891267, + "-", + 696 + ] + ], + "md5": "99136df323e4fe2c6913a1da9665a066", + "parent_gene": "", + "protein_md5": "e85b00285a9006d7a913031cd385f58f", + "protein_translation": "MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPEIVHERMQQLSGEWVTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYLRNNVAWKKLPGKE", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006016" + ], + [ + "gene_synonym", + "ECK1806" + ], + [ + "gene_synonym", + "EcoGene:EG13513" + ], + [ + "gene_synonym", + "GI:16129762" + ], + [ + "gene_synonym", + "GeneID:946305" + ], + [ + "gene_synonym", + "JW1797" + ], + [ + "gene_synonym", + "NP_416322.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76257" + ], + [ + "gene_synonym", + "b1808" + ], + [ + "gene_synonym", + "yoaA" + ] + ], + "dna_sequence": "GTGACGGACGATTTTGCACCAGACGGTCAGCTGGCGAAAGCGATACCAGGCTTTAAGCCGCGAGAACCACAGCGACAGATGGCGGTAGCCGTCACCCAGGCGATAGAAAAAGGCCAGCCGCTGGTGGTGGAAGCAGGAACCGGTACGGGCAAAACCTACGCTTACCTGGCTCCTGCGCTGCGGGCGAAAAAGAAAGTCATTATCTCGACCGGCTCAAAAGCGTTGCAGGATCAGCTCTACAGCCGCGATTTGCCAACAGTCTCAAAGGCATTGAAATATACGGGCAACGTGGCGCTGCTGAAAGGGCGCTCAAACTACCTCTGCCTCGAACGTCTCGAACAGCAGGCGCTGGCGGGGGGCGATCTGCCGGTACAAATCTTAAGCGATGTGATCCTGCTGCGCTCCTGGTCTAATCAAACAGTCGATGGTGATATCAGCACCTGCGTCAGCGTGGCGGAAGATTCACAGGCGTGGCCGCTGGTCACCAGCACCAACGACAACTGTCTTGGCAGCGACTGCCCGATGTATAAAGATTGCTTTGTGGTCAAAGCACGTAAAAAAGCGATGGACGCCGATGTGGTGGTGGTAAACCATCATCTCTTTCTGGCGGATATGGTGGTTAAAGAGAGTGGATTTGGCGAACTGATCCCGGAAGCGGACGTCATGATCTTCGACGAAGCCCACCAGCTACCGGACATTGCCAGCCAGTATTTTGGTCAGTCACTCTCCAGTCGACAACTGCTCGACCTGGCAAAAGACATCACCATCGCCTACCGCACCGAATTAAAAGACACCCAGCAGTTACAAAAGTGCGCTGATCGTCTTGCCCAGAGTGCGCAGGATTTTCGTCTGCAACTCGGTGAGCCAGGTTATCGCGGTAACCTGCGTGAGCTGTTAGCTAATCCGCAAATTCAGCGGGCATTTTTACTGCTCGATGACACCCTGGAACTTTGTTATGACGTGGCGAAACTGTCACTGGGGCGTTCCGCCTTGCTGGATGCGGCATTTGAGCGCGCCACGTTGTATCGCACACGGCTGAAGCGGCTAAAAGAGATCAATCAGCCGGGCTACAGCTACTGGTACGAATGCACTTCGCGCCATTTTACTCTGGCTCTCACGCCGCTCAGCGTGGCGGATAAATTCAAAGAGTTAATGGCGCAAAAACCCGGTAGCTGGATCTTCACCTCAGCAACGCTGTCGGTGAACGACGATCTGCATCATTTCACCTCGCGGCTTGGCATCGAACAGGCCGAGTCGTTGCTGTTGCCCAGCCCATTTGATTACAGCCGCCAGGCGTTACTCTGTGTGCTGCGCAATCTGCCGCAAACCAACCAGCCAGGTTCTGCTCGCCAGTTAGCGGCAATGCTGCGACCGATCATCGAAGCTAACAACGGTCGTTGTTTTATGCTTTGTACCTCGCACGCCATGATGCGCGATCTGGCCGAGCAGTTCCGCGCTACCATGACGCTTCCTGTATTGTTGCAGGGGGAAACCAGCAAAGGGCAACTGTTGCAGCAATTTGTCAGCGCCGGTAATGCGCTTCTTGTGGCAACCAGCAGTTTCTGGGAAGGGGTGGACGTGCGTGGCGATACATTGTCATTGGTAATTATCGACAAATTGCCGTTTACCTCGCCGGATGATCCACTGTTAAAAGCGCGCATGGAAGATTGTCGTTTGCGCGGTGGCGACCCGTTCGATGAAGTGCAACTACCAGATGCCGTCATTACTCTCAAACAGGGGGTAGGGCGACTGATTCGCGACGCCGACGATCGTGGCGTGCTGGTGATTTGTGACAATCGGCTGGTGATGCGTCCTTACGGCGCGACGTTTCTCGCCAGTCTGCCGCCCGCGCCACGCACCCGTGACATTGCCCGTGCGGTTCGTTTCCTTGCGATACCATCCTCCAGGTAA", + "dna_sequence_length": 1911, + "functions": [ + "putative ATP-dependent helicase, DinG family" + ], + "id": "CDS_1799", + "location": [ + [ + "NC_000913", + 1893235, + "-", + 1911 + ] + ], + "md5": "40c0404e1649d6a2599b6e7efcfb310b", + "parent_gene": "", + "protein_md5": "9a93dd25c78b27e226024e9779d2b3ed", + "protein_translation": "MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVLRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR", + "protein_translation_length": 636, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006020" + ], + [ + "gene_synonym", + "ECK1807" + ], + [ + "gene_synonym", + "EcoGene:EG13514" + ], + [ + "gene_synonym", + "GI:90111336" + ], + [ + "gene_synonym", + "GeneID:946357" + ], + [ + "gene_synonym", + "JW5295" + ], + [ + "gene_synonym", + "NP_416323.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEB7" + ], + [ + "gene_synonym", + "b1809" + ], + [ + "gene_synonym", + "yoaB" + ] + ], + "dna_sequence": "ATGACTATCGTTCGTATCGATGCTGAAGCCCGCTGGTCTGATGTAGTAATCCACAACAACACGCTCTACTACACTGGTGTACCGGAAAACCTCGACGCCGATGCCTTTGAGCAAACCGCCAACACGCTGGCACAGATTGACGCCGTGCTGGAAAAACAGGGCAGCAATAAATCGAGCATTCTGGATGCCACCATTTTCCTGGCCGATAAAAACGACTTCGCGGCGATGAATAAAGCGTGGGATGCTTGGGTTGTCGCGGGTCATGCGCCGGTGCGCTGCACGGTACAAGCGGGTTTGATGAACCCGAAGTATAAAGTTGAAATTAAGATTGTGGCTGCGGTGTAA", + "dna_sequence_length": 345, + "functions": [ + "putative reactive intermediate deaminase" + ], + "id": "CDS_1800", + "location": [ + [ + "NC_000913", + 1893367, + "+", + 345 + ] + ], + "md5": "4abc9d959ee4a94a46b0d3f0dfec2231", + "parent_gene": "", + "protein_md5": "a3a31d17671eca9f3cc6674aea4faab9", + "protein_translation": "MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006024" + ], + [ + "gene_synonym", + "ECK1808" + ], + [ + "gene_synonym", + "EcoGene:EG13515" + ], + [ + "gene_synonym", + "GI:226524724" + ], + [ + "gene_synonym", + "GeneID:946308" + ], + [ + "gene_synonym", + "JW5296" + ], + [ + "gene_synonym", + "NP_416324.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64490" + ], + [ + "gene_synonym", + "b1810" + ], + [ + "gene_synonym", + "yoaC" + ] + ], + "dna_sequence": "ATGCCTGCTGTAATAGATAAAGCCCTGGATTTCATTGGTGCCATGGATGTATCAGCGCCAACACCAAGTTCGATGAATGAAAGCACGGCGAAGGGAATCTTTAAATATTTAAAAGAACTGGGAGTACCCGCGAGTGCCGCTGATATTACGGCGCGAGCTGACCAGGAAGGCTGGAACCCTGGGTTCACGGAAAAAATGGTTGGATGGGCAAAAAAAATGGAGACAGGTGAACGTTCTGTGATTAAAAATCCTGAATACTTTTCAACATATATGCAGGAAGAACTAAAAGCACTGGTCTGA", + "dna_sequence_length": 300, + "functions": [ + "DUF1889 family protein" + ], + "id": "CDS_1801", + "location": [ + [ + "NC_000913", + 1894133, + "+", + 300 + ] + ], + "md5": "83c48f74c65b29ccd50ffabbafdb0ad2", + "parent_gene": "", + "protein_md5": "d6359e62dc68b2a150cdc8b5427262d7", + "protein_translation": "MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMETGERSVIKNPEYFSTYMQEELKALV", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006026" + ], + [ + "gene_synonym", + "ECK1809" + ], + [ + "gene_synonym", + "EcoGene:EG14306" + ], + [ + "gene_synonym", + "GI:16129765" + ], + [ + "gene_synonym", + "GeneID:946346" + ], + [ + "gene_synonym", + "JW1800" + ], + [ + "gene_synonym", + "NP_416325.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67338" + ], + [ + "gene_synonym", + "b1811" + ], + [ + "gene_synonym", + "yoaH" + ] + ], + "dna_sequence": "ATGTTTGCAGGTTTACCTTCACTCACCCATGAACAGCAGCAAAAAGCTGTCGAGCGGATCCAGGAACTGATGGCACAAGGGATGAGCAGCGGCCAGGCAATCGCGCTGGTGGCAGAAGAGCTGCGTGCCAACCACTCCGGCGAGCGAATCGTGGCGCGTTTTGAGGATGAAGACGAGTAA", + "dna_sequence_length": 180, + "functions": [ + "UPF0181 family protein" + ], + "id": "CDS_1802", + "location": [ + [ + "NC_000913", + 1894731, + "-", + 180 + ] + ], + "md5": "c9c6d6addd47f68b9c48c88c0fabb508", + "parent_gene": "", + "protein_md5": "3ecc229e111a2dda5f13f13566d72467", + "protein_translation": "MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRANHSGERIVARFEDEDE", + "protein_translation_length": 59, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006031" + ], + [ + "gene_synonym", + "ECK1810" + ], + [ + "gene_synonym", + "EcoGene:EG10683" + ], + [ + "gene_synonym", + "GI:16129766" + ], + [ + "gene_synonym", + "GeneID:946337" + ], + [ + "gene_synonym", + "JW1801" + ], + [ + "gene_synonym", + "NP_416326.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05041" + ], + [ + "gene_synonym", + "b1812" + ], + [ + "gene_synonym", + "pabB" + ] + ], + "dna_sequence": "ATGAAGACGTTATCTCCCGCTGTGATTACTTTACTCTGGCGTCAGGACGCCGCTGAATTTTATTTCTCCCGCTTAAGCCACCTGCCGTGGGCGATGCTTTTACACTCCGGCTATGCCGATCATCCGTATAGCCGCTTTGATATTGTGGTCGCCGAGCCGATTTGCACTTTAACCACTTTCGGTAAAGAAACCGTTGTTAGTGAAAGCGAAAAACGCACAACGACCACTGATGACCCGCTACAGGTGCTCCAGCAGGTGCTGGATCGCGCAGACATTCGCCCAACGCATAACGAAGATTTGCCATTTCAGGGCGGCGCACTGGGGTTGTTTGGCTACGATCTGGGCCGCCGTTTTGAGTCACTGCCAGAAATTGCGGAACAAGATATCGTTCTGCCGGATATGGCAGTGGGTATCTACGATTGGGCGCTCATTGTCGACCACCAGCGTCATACAGTTTCTTTGCTGAGTCATAATGATGTCAATGCCCGTCGGGCCTGGCTGGAAAGCCAGCAATTCTCGCCGCAGGAAGATTTCACGCTCACTTCCGACTGGCAATCCAATATGACCCGCGAGCAGTACGGCGAAAAATTTCGCCAGGTACAGGAATATCTGCACAGCGGTGATTGCTATCAGGTGAATCTCGCCCAACGTTTTCATGCGACCTATTCTGGCGATGAATGGCAGGCATTCCTTCAGCTTAATCAGGCCAACCGCGCGCCATTTAGCGCTTTTTTACGTCTTGAACAGGGTGCAATTTTAAGCCTTTCGCCAGAGCGGTTTATTCTTTGTGATAATAGTGAAATCCAGACCCGCCCGATTAAAGGCACGCTACCACGCCTGCCCGATCCTCAGGAAGATAGCAAACAAGCAGTAAAACTGGCGAACTCAGCGAAAGATCGTGCCGAAAATCTGATGATTGTCGATTTAATGCGTAATGATATCGGTCGTGTTGCCGTAGCAGGTTCGGTAAAAGTACCAGAGCTGTTCGTGGTGGAACCCTTCCCTGCCGTGCATCATCTGGTCAGCACCATAACGGCGCAACTACCAGAACAGTTACACGCCAGCGATCTGCTGCGCGCAGCTTTTCCTGGTGGCTCAATAACCGGGGCTCCGAAAGTACGGGCTATGGAAATTATCGACGAACTGGAACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAA", + "dna_sequence_length": 1362, + "functions": [ + "aminodeoxychorismate synthase, subunit I" + ], + "id": "CDS_1803", + "location": [ + [ + "NC_000913", + 1894805, + "+", + 1362 + ] + ], + "md5": "c3577683420bef886bdff6e07575710c", + "parent_gene": "", + "protein_md5": "b1411296cac0e1bc765c50493337e272", + "protein_translation": "MKTLSPAVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLEK", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006035" + ], + [ + "gene_synonym", + "ECK1811" + ], + [ + "gene_synonym", + "EcoGene:EG12693" + ], + [ + "gene_synonym", + "GI:16129767" + ], + [ + "gene_synonym", + "GeneID:946330" + ], + [ + "gene_synonym", + "JW1802" + ], + [ + "gene_synonym", + "NP_416327.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43337" + ], + [ + "gene_synonym", + "b1813" + ], + [ + "gene_synonym", + "nudL" + ], + [ + "gene_synonym", + "yeaB" + ] + ], + "dna_sequence": "GTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAATCCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCGATAGCGTCACTGGCTACCAGGTAACCCCAGTGGTCGGCATTATCCCGCCCGATCTGCCGTATCGCGCCAGTGAAGATGAAGTCTCGGCGGTGTTTGAAATGCCGCTCGCCCAGGCATTACATCTGGGTCGTTATCACCCTTTAGATATCTACCGCCGTGGTGATTCACATCGGGTATGGCTGTCCTGGTACGAACAGTATTTTGTATGGGGAATGACCGCAGGCATAATTCGTGAGCTGGCGCTGCAAATTGGTGTGAAACCCTGA", + "dna_sequence_length": 579, + "functions": [ + "putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase" + ], + "id": "CDS_1804", + "location": [ + [ + "NC_000913", + 1896170, + "+", + 579 + ] + ], + "md5": "6c5751fc30c3eae0cd74796636b91648", + "parent_gene": "", + "protein_md5": "7d3f6ef844d8c00f9499d0108daa6485", + "protein_translation": "MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASAIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006039" + ], + [ + "gene_synonym", + "ECK1812" + ], + [ + "gene_synonym", + "EcoGene:EG10930" + ], + [ + "gene_synonym", + "GI:16129768" + ], + [ + "gene_synonym", + "GeneID:946331" + ], + [ + "gene_synonym", + "JW1803" + ], + [ + "gene_synonym", + "NP_416328.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16095" + ], + [ + "gene_synonym", + "b1814" + ], + [ + "gene_synonym", + "sdaA" + ] + ], + "dna_sequence": "GTGATTAGTCTATTCGACATGTTTAAGGTGGGGATTGGTCCCTCATCTTCCCATACCGTAGGGCCTATGAAGGCAGGTAAACAGTTCGTCGATGATCTGGTCGAAAAAGGCTTACTGGATAGCGTTACTCGCGTTGCCGTGGACGTTTATGGTTCACTGTCGCTGACGGGTAAAGGCCACCACACCGATATCGCCATTATTATGGGTCTTGCAGGTAACGAACCTGCCACCGTGGATATCGACAGTATTCCCGGTTTTATTCGCGACGTAGAAGAGCGCGAACGTCTGCTGCTGGCACAGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATGCAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTCGTGTGGTAACTGCGCCAACCAACGGTGCCTGCGGTATCGTTCCGGCAGTGCTGGCTTACTATGACCACTTTATTGAATCGGTCAGCCCGGACATCTATACCCGTTACTTTATGGCAGCGGGCGCGATTGGTGCATTGTATAAAATGAACGCCTCTATTTCCGGTGCGGAAGTTGGTTGCCAGGGCGAAGTGGGTGTTGCCTGTTCAATGGCTGCTGCGGGTCTTGCAGAACTGCTGGGCGGTAGCCCGGAACAGGTTTGCGTGGCGGCGGAAATTGGCATGGAACACAACCTTGGTTTAACCTGCGACCCGGTTGCAGGGCAGGTTCAGGTGCCGTGCATTGAGCGTAATGCCATTGCCTCTGTGAAGGCGATTAACGCCGCGCGGATGGCTCTGCGCCGCACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAA", + "dna_sequence_length": 1365, + "functions": [ + "L-serine dehydratase 1" + ], + "id": "CDS_1805", + "location": [ + [ + "NC_000913", + 1896932, + "+", + 1365 + ] + ], + "md5": "85e50be6f5266d4b648f8631f89a12c1", + "parent_gene": "", + "protein_md5": "bf7216a4226d57d3a3421b46058d0606", + "protein_translation": "MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGRHEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQDAANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQACIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006043" + ], + [ + "gene_synonym", + "ECK1813" + ], + [ + "gene_synonym", + "EcoGene:EG13516" + ], + [ + "gene_synonym", + "GI:90111337" + ], + [ + "gene_synonym", + "GeneID:946336" + ], + [ + "gene_synonym", + "JW1804" + ], + [ + "gene_synonym", + "NP_416329.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76261" + ], + [ + "gene_synonym", + "adrB" + ], + [ + "gene_synonym", + "b1815" + ], + [ + "gene_synonym", + "yoaD" + ] + ], + "dna_sequence": "ATGCAAAAAGCACAACGGATCATTAAAACCTATCGTCGTAATCGAATGATTGTTTGTACGATTTGCGCACTCGTTACGCTCGCTTCGACCCTGAGCGTGCGATTTATTTCACAGCGTAACTTAAATCAACAACGGGTAGTACAATTCGCCAATCACGCTGTAGAGGAATTAGATAAAGTACTGCTTCCCCTACAGGCAGGTAGCGAAGTCTTGCTTCCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCGATCCATTGGCCTGGTGCAAGACGGCACACTTTATTGCTCCAGCATTTTTGGTTATCGCAATGTGCCCGTCGTGGACATTCTGGCTGAACTTCCTGCACCGCAACCACTTTTACGCCTGACGATCGACCGTGCCCTGATTAAAGGCAGTCCGGTTTTGATTCAATGGACGCCTGCAGCGGGCAGTAGCAATGCTGGGGTCATGGAGATGATTAACATCGACTTACTGACGGCAATGCTGCTTGAGCCACAACTGCCGCAAATCAGTAGCGCCAGCCTGACGGTGGACAAACGGCATTTGCTCTATGGTAATGGGCTGGTAGATTCCCTTCCGCAACCTGAAGACAATGAAAACTATCAGGTTTCTTCGCAACGCTTTCCTTTTACCATTAACGTTAATGGTCCGGGGGCTACGGCGCTGGCATGGCACTATCTTCCAACACAATTACCGCTGGCGGTGCTGCTAAGTTTACTGGTGGGCTACATCGCCTGGCTGGCGACCGCTTACCGAATGAGCTTTTCCCGCGAAATCAATCTGGGCCTGGCGCAACATGAGTTCGAATTGTTCTGTCAGCCTTTGCTTAATGCGCGCAGCCAGCAATGTATTGGTGTAGAGATTTTGCTGCGCTGGAACAATCCGCGTCAGGGCTGGATTTCACCGGATGTGTTTATTCCTATCGCGGAAGAACATCATTTAATTGTGCCACTGACCCGCTATGTGATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGCTCGTTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACCGCCGCCCGCCCGGCATAATGGACATATCACGCCCATTATGCCGTTACGTTAA", + "dna_sequence_length": 1599, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production" + ], + "id": "CDS_1806", + "location": [ + [ + "NC_000913", + 1898427, + "+", + 1599 + ] + ], + "md5": "b9e1100e916953a89474d2ecb8a72279", + "parent_gene": "", + "protein_md5": "6599b047ce809f202d1148b59800ef40", + "protein_translation": "MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR", + "protein_translation_length": 532, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006045" + ], + [ + "gene_synonym", + "ECK1814" + ], + [ + "gene_synonym", + "EcoGene:EG13517" + ], + [ + "gene_synonym", + "GI:16129770" + ], + [ + "gene_synonym", + "GeneID:946335" + ], + [ + "gene_synonym", + "JW1805" + ], + [ + "gene_synonym", + "NP_416330.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC0" + ], + [ + "gene_synonym", + "b1816" + ], + [ + "gene_synonym", + "borG" + ], + [ + "gene_synonym", + "yoaE" + ] + ], + "dna_sequence": "ATGGAATTCTTAATGGACCCCTCAATTTGGGCGGGGCTACTCACGCTTGTTGTTCTCGAAATTGTGCTGGGTATCGATAACCTGGTCTTCATCGCCATTCTTGCTGACAAACTGCCGCCAAAACAACGCGATAAAGCGCGTTTGCTGGGGTTATCACTGGCGCTGATTATGCGTCTGGGGCTGCTGTCGCTGATTTCATGGATGGTCACGCTGACCAAACCGCTATTTACCGTCATGGATTTCTCCTTCTCCGGACGCGACCTGATTATGTTGTTCGGGGGGATATTCTTGCTGTTCAAAGCAACAACCGAACTGCATGAACGGCTGGAAAACCGCGATCATGATTCCGGCCACGGTAAAGGCTACGCCAGTTTCTGGGTGGTCGTCACACAGATTGTCATCCTTGACGCCGTCTTCTCGTTGGATGCGGTAATTACTGCAGTAGGGATGGTTAACCATCTGCCGGTGATGATGGCGGCGGTAGTGATTGCGATGGCGGTTATGTTGCTGGCATCCAAACCGCTGACGCGATTCGTTAACCAGCACCCCACGGTGGTGGTGCTCTGTCTGAGCTTCCTGTTAATGATTGGTCTGAGTCTGGTGGCAGAAGGTTTCGGTTTCCACATTCCGAAAGGTTACCTGTATGCCGCGATTGGCTTCTCGATCATCATCGAAGTGTTTAACCAGATTGCGCGTCGCAACTTTATTCGCCACCAGTCGACTTTGCCGCTGCGAGCGCGTACTGCCGATGCCATCCTGCGTTTGATGGGCGGGAAACGTCAGGCCAATGTTCAGCACGATGCCGATAACCCGATGCCGATGCCGATCCCGGAAGGTGCATTTGCCGAAGAAGAACGTTACATGATTAACGGCGTACTGACGCTGGCGTCGCGTTCTCTGCGCGGGATCATGACGCCGCGCGGTGAAATAAGCTGGGTTGACGCTAATCTCGGGGTCGATGAAATCCGCGAGCAACTGCTCTCTTCACCGCACAGTCTGTTCCCGGTATGTCGCGGTGAACTGGATGAAATCATCGGTATTGTACGTGCTAAAGAACTGCTGGTGGCGCTGGAAGAGGGCGTTGATGTGGCGGCGATTGCTTCGGCGTCTCCGGCGATTATCGTCCCGGAAACCCTCGATCCGATCAACCTGTTGGGCGTGCTGCGTCGTGCTCGCGGGAGCTTTGTTATCGTGACCAACGAGTTTGGTGTGGTACAAGGTCTGGTCACGCCGCTGGATGTGCTGGAAGCCATTGCGGGTGAATTCCCGGACGCTGACGAAACGCCGGAAATCATTACTGATGGTGACGGCTGGCTGGTAAAAGGCGGTACAGATTTGCATGCCTTGCAGCAGGCGCTTGATGTTGAGCACCTTGCCGATGACGATGATATCGCGACGGTCGCGGGCCTCGTGATCTCGGCAAATGGTCACATTCCCCGTGTGGGCGATGTGATTGATGTAGGGCCACTGCATATCACCATCATTGAAGCCAATGATTATCGTGTTGATCTGGTTCGCATTGTTAAAGAGCAACCGGCGCACGATGAAGATGAGTAA", + "dna_sequence_length": 1557, + "functions": [ + "putative membrane protein/conserved protein" + ], + "id": "CDS_1807", + "location": [ + [ + "NC_000913", + 1901585, + "-", + 1557 + ] + ], + "md5": "07f00a749a85383df5db561aee9b19d6", + "parent_gene": "", + "protein_md5": "a26f4541e13f5f48b320c36752d290b1", + "protein_translation": "MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQPAHDEDE", + "protein_translation_length": 518, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006054" + ], + [ + "gene_synonym", + "ECK1815" + ], + [ + "gene_synonym", + "EcoGene:EG10567" + ], + [ + "gene_synonym", + "GI:16129771" + ], + [ + "gene_synonym", + "GeneID:946334" + ], + [ + "gene_synonym", + "JW1806" + ], + [ + "gene_synonym", + "NP_416331.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69797" + ], + [ + "gene_synonym", + "b1817" + ], + [ + "gene_synonym", + "gptB" + ], + [ + "gene_synonym", + "manX" + ], + [ + "gene_synonym", + "mpt" + ], + [ + "gene_synonym", + "ptsL" + ], + [ + "gene_synonym", + "ptsX" + ] + ], + "dna_sequence": "GTGACCATTGCTATTGTTATAGGCACACATGGTTGGGCTGCAGAGCAGTTGCTTAAAACGGCAGAAATGCTGTTAGGCGAGCAGGAAAACGTCGGCTGGATCGATTTCGTTCCAGGTGAAAATGCCGAAACGCTGATTGAAAAGTACAACGCTCAGTTGGCAAAACTCGACACCACTAAAGGCGTGCTGTTTCTCGTTGATACATGGGGAGGCAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCGTTAACATTCCAATGCTCGTGGAAACGTTAATGGCCCGTGATGATGACCCAAGCTTTGATGAACTGGTGGCACTGGCAGTAGAAACAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCTGCCGCAGCACCAAAAGCGGCTCCAACTCCGGCAAAACCAATGGGGCCAAACGACTACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGAAACCAATGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTGCACCTCCGGGCGTAACAGCACACGTAGTTGATGTTGCCAAAATGATTCGCGTCTACAACAACCCGAAATATGCTGGCGAACGCGTAATGCTGTTATTTACCAACCCAACAGATGTAGAGCGTCTCGTTGAAGGCGGCGTGAAAATCACCTCTGTTAACGTCGGTGGTATGGCATTCCGTCAGGGTAAAACCCAGGTGAATAACGCGGTTTCGGTTGATGAAAAAGATATCGAGGCGTTCAAGAAACTGAATGCGCGCGGTATTGAGCTGGAAGTCCGTAAGGTTTCCACCGATCCGAAACTGAAAATGATGGATCTGATCAGCAAAATCGATAAGTAA", + "dna_sequence_length": 972, + "functions": [ + "fused mannose-specific PTS enzymes: IIA component/IIB component" + ], + "id": "CDS_1808", + "location": [ + [ + "NC_000913", + 1902048, + "+", + 972 + ] + ], + "md5": "17eb8d352bf08c028b70a8c741c89b76", + "parent_gene": "", + "protein_md5": "c25d69640a5dcceb8df5831ecaa02add", + "protein_translation": "MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPNDYMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006056" + ], + [ + "gene_synonym", + "ECK1816" + ], + [ + "gene_synonym", + "EcoGene:EG10568" + ], + [ + "gene_synonym", + "GI:16129772" + ], + [ + "gene_synonym", + "GeneID:946332" + ], + [ + "gene_synonym", + "JW1807" + ], + [ + "gene_synonym", + "NP_416332.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69801" + ], + [ + "gene_synonym", + "b1818" + ], + [ + "gene_synonym", + "manY" + ], + [ + "gene_synonym", + "pel" + ], + [ + "gene_synonym", + "ptsP" + ], + [ + "gene_synonym", + "ptsX" + ] + ], + "dna_sequence": "ATGGAGATTACCACTCTTCAAATTGTGCTGGTATTTATCGTAGCCTGTATCGCAGGTATGGGATCAATCCTCGATGAATTTCAGTTTCACCGTCCGCTAATCGCGTGTACCCTGGTGGGTATCGTTCTTGGGGATATGAAAACCGGTATTATTATCGGTGGTACGCTGGAAATGATCGCGCTGGGCTGGATGAACATCGGTGCTGCAGTTGCGCCTGACGCCGCTCTGGCTTCTATCATTTCTACCATTCTGGTTATCGCAGGTCATCAGAGCATTGGTGCAGGTATCGCACTGGCAATCCCTCTGGCCGCTGCGGGCCAGGTACTGACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTGCAAGCAATGCGTGTGGCTATTCCGGCCGTCATCGTTGCGCTGTCTGTTGGTACCAGCGAAGTACAGAACATGCTGAATGCGATTCCGGAAGTGGTGACCAATGGTCTGAATATCGCCGGTGGCATGATCGTGGTGGTTGGTTATGCGATGGTTATCAACATGATGCGTGCTGGCTACCTGATGCCGTTCTTCTACCTCGGCTTCGTAACCGCAGCATTCACCAACTTTAACCTGGTTGCTCTGGGTGTGATTGGTACTGTTATGGCAGTGCTCTACATCCAACTTAGCCCGAAATACAACCGCGTAGCCGGTGCGCCTGCTCAGGCAGCTGGTAACAACGATCTCGATAACGAACTGGACTAA", + "dna_sequence_length": 801, + "functions": [ + "mannose-specific enzyme IIC component of PTS" + ], + "id": "CDS_1809", + "location": [ + [ + "NC_000913", + 1903082, + "+", + 801 + ] + ], + "md5": "704ddac626445dba31a18c14492bda07", + "parent_gene": "", + "protein_md5": "4c553198e7900ab1cdf0390884503954", + "protein_translation": "MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006058" + ], + [ + "gene_synonym", + "ECK1817" + ], + [ + "gene_synonym", + "EcoGene:EG10569" + ], + [ + "gene_synonym", + "GI:345452720" + ], + [ + "gene_synonym", + "GeneID:946342" + ], + [ + "gene_synonym", + "JW1808" + ], + [ + "gene_synonym", + "NP_416333.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69805" + ], + [ + "gene_synonym", + "b1819" + ], + [ + "gene_synonym", + "gptB" + ], + [ + "gene_synonym", + "manZ" + ], + [ + "gene_synonym", + "mpt" + ], + [ + "gene_synonym", + "ptsM" + ], + [ + "gene_synonym", + "ptsX" + ] + ], + "dna_sequence": "ATGGTTGATACAACTCAAACTACCACCGAGAAAAAACTCACTCAAAGTGATATTCGTGGCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCACCTGGAGTTCTTTAACACCCAGCCGTTCGTGGCTGCGCCGATTCTCGGCGTAACCCTGGCGCTGGAAGAACAGCGTGCTAATGGCGCAGAGATCGACGACGGTGCTATCAACGGTATCAAAGTCGGTTTGATGGGGCCACTGGCTGGTGTAGGCGACCCGATCTTCTGGGGAACCGTACGTCCGGTATTTGCAGCACTGGGTGCCGGTATCGCGATGAGCGGCAGCCTGTTAGGTCCGCTGCTGTTCTTCATCCTGTTTAACCTGGTGCGTCTGGCAACCCGTTACTACGGCGTAGCGTATGGTTACTCCAAAGGTATCGATATCGTTAAAGATATGGGTGGTGGCTTCCTGCAAAAACTGACGGAAGGGGCGTCTATCCTCGGCCTGTTTGTCATGGGGGCATTGGTTAACAAGTGGACACATGTCAACATCCCGCTGGTTGTCTCTCGCATTACTGACCAGACGGGCAAAGAACACGTTACTACTGTCCAGACTATTCTGGACCAGTTAATGCCAGGCCTGGTACCACTGCTGCTGACCTTTGCTTGTATGTGGCTACTGCGCAAAAAAGTTAACCCGCTGTGGATCATCGTTGGCTTCTTCGTCATCGGTATCGCTGGTTACGCTTGCGGCCTGCTGGGACTGTAA", + "dna_sequence_length": 852, + "functions": [ + "mannose-specific enzyme IID component of PTS" + ], + "id": "CDS_1810", + "location": [ + [ + "NC_000913", + 1903895, + "+", + 852 + ] + ], + "md5": "f88c26e16e6031bc352843dff4584510", + "parent_gene": "", + "protein_md5": "48ceeff369173479995acd1316efe884", + "protein_translation": "MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDGAINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLATRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYACGLLGL", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006062" + ], + [ + "gene_synonym", + "ECK1818" + ], + [ + "gene_synonym", + "EcoGene:EG13948" + ], + [ + "gene_synonym", + "GI:16129774" + ], + [ + "gene_synonym", + "GeneID:946343" + ], + [ + "gene_synonym", + "JW1809" + ], + [ + "gene_synonym", + "NP_416334.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67601" + ], + [ + "gene_synonym", + "b1820" + ], + [ + "gene_synonym", + "yobD" + ] + ], + "dna_sequence": "ATGACAATCACGGACCTGGTACTGATTCTTTTCATCGCCGCACTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACATGGTTATTAAGCGCACTGGCTCTGATGGGTTTTTATATATTCTGGATCCGCGTTCCGAAGATCATCTTTAAACAAAAAGGTTTTTTCTTCGCCAATGTCTGGATTGAATATAGCCGAATCAAAGCGATGAACTTGTCGGAAGATGGCGTGTTGGTGATGCAATTAGAACAGCGTCGGCTGTTAATCCGCGTTCGAAATATCGACGATCTGGAAAAAATTTATAAGCTTCTCGTTTCAACTCAATAA", + "dna_sequence_length": 459, + "functions": [ + "UPF0266 family inner membrane protein" + ], + "id": "CDS_1811", + "location": [ + [ + "NC_000913", + 1904801, + "+", + 459 + ] + ], + "md5": "a61dc44ed1140d302bcc8ae63d4ea846", + "parent_gene": "", + "protein_md5": "47db7125f51b03a68b3081b13ec28e24", + "protein_translation": "MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006065" + ], + [ + "gene_synonym", + "ECK1819" + ], + [ + "gene_synonym", + "EcoGene:EG14012" + ], + [ + "gene_synonym", + "GI:162135903" + ], + [ + "gene_synonym", + "GeneID:946341" + ], + [ + "gene_synonym", + "JW5830" + ], + [ + "gene_synonym", + "NP_416335.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76264" + ], + [ + "gene_synonym", + "b1821" + ], + [ + "gene_synonym", + "mntP" + ], + [ + "gene_synonym", + "yebN" + ] + ], + "dna_sequence": "ATGAATATCACTGCTACTGTTCTTCTTGCGTTTGGTATGTCGATGGATGCATTTGCTGCATCAATCGGTAAAGGTGCCACCCTCCATAAACCGAAATTTTCTGAAGCATTGCGAACCGGCCTTATTTTTGGTGCCGTCGAAACCCTGACGCCGCTGATCGGCTGGGGAATGGGCATGTTAGCCAGCCGGTTTGTCCTTGAATGGAACCACTGGATTGCGTTTGTGCTGCTGATATTCCTCGGCGGGCGAATGATTATTGAGGGTTTTCGTGGCGCAGATGATGAAGATGAAGAGCCGCGCCGTCGACACGGTTTCTGGCTACTGGTAACCACCGCGATTGCCACCAGCCTGGATGCCATGGCTGTGGGTGTTGGTCTTGCTTTCCTGCAGGTCAACATTATCGCGACCGCATTGGCCATTGGTTGTGCAACCTTGATTATGTCAACATTAGGGATGATGGTTGGTCGCTTTATCGGCTCAATTATTGGGAAAAAAGCGGAAATTCTCGGCGGGCTGGTGCTGATCGGCATCGGCGTCCAGATCCTCTGGACGCACTTCCACGGTTAA", + "dna_sequence_length": 567, + "functions": [ + "putative Mn(2+) efflux pump, mntR-regulated" + ], + "id": "CDS_1812", + "location": [ + [ + "NC_000913", + 1905688, + "+", + 567 + ] + ], + "md5": "4fb3838e73a4b15c86fe3e5ba627f9be", + "parent_gene": "", + "protein_md5": "2e547cbfa43d1e49e46c633015a4edae", + "protein_translation": "MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006067" + ], + [ + "gene_synonym", + "ECK1820" + ], + [ + "gene_synonym", + "EcoGene:EG12207" + ], + [ + "gene_synonym", + "GI:16129776" + ], + [ + "gene_synonym", + "GeneID:946340" + ], + [ + "gene_synonym", + "JW1811" + ], + [ + "gene_synonym", + "NP_416336.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36999" + ], + [ + "gene_synonym", + "b1822" + ], + [ + "gene_synonym", + "rlmA" + ], + [ + "gene_synonym", + "rrmA" + ], + [ + "gene_synonym", + "yebH" + ] + ], + "dna_sequence": "ATGTCTTTTTCCTGTCCACTTTGCCATCAGCCTCTTTCGCGTGAAAAAAACAGCTATATCTGTCCCCAGCGACATCAGTTTGATATGGCGAAAGAAGGGTATGTCAATCTGCTGCCCGTTCAGCATAAACGGTCTCGTGATCCGGGCGACAGCGCGGAAATGATGCAAGCACGCCGCGCATTCTTAGATGCCGGACATTATCAGCCGCTGCGTGATGCAATTGTCGCCCAACTGAGGGAACGGCTTGATGATAAGGCCACGGCGGTGCTGGATATTGGCTGTGGTGAAGGGTATTACACACACGCATTTGCCGATGCGTTGCCCGAAATCACCACGTTTGGTCTGGATGTTTCGAAGGTAGCGATAAAAGCGGCGGCGAAACGCTATCCGCAGGTCACTTTTTGTGTCGCTTCCAGCCACCGTTTGCCGTTTTCCGATACCAGTATGGACGCCATAATACGTATTTACGCGCCGTGTAAAGCAGAAGAATTAGCACGAGTAGTGAAGCCCGGCGGCTGGGTCATTACTGCCACGCCGGGACCGCGACATTTGATGGAGCTGAAGGGGCTGATTTACAATGAAGTACATCTTCATGCACCTCATGCAGAACAACTGGAAGGTTTTACATTACAGCAGAGTGCGGAGTTGTGTTATCCGATGCGTCTTCGCGGTGATGAAGCCGTCGCATTATTGCAGATGACGCCGTTTGCCTGGCGTGCGAAGCCAGAAGTCTGGCAAACACTGGCAGCAAAAGAAGTGTTCGACTGCCAGACGGACTTTAATATTCACCTCTGGCAGCGTTCTTATTAA", + "dna_sequence_length": 810, + "functions": [ + "23S rRNA m(1)G745 methyltransferase, SAM-dependent" + ], + "id": "CDS_1813", + "location": [ + [ + "NC_000913", + 1907060, + "-", + 810 + ] + ], + "md5": "2c1145e26cd38808221f986ff78a46eb", + "parent_gene": "", + "protein_md5": "ef043d767ee531f86c186a863bf7fcef", + "protein_translation": "MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006070" + ], + [ + "gene_synonym", + "ECK1821" + ], + [ + "gene_synonym", + "EcoGene:EG12204" + ], + [ + "gene_synonym", + "GI:16129777" + ], + [ + "gene_synonym", + "GeneID:946339" + ], + [ + "gene_synonym", + "JW1812" + ], + [ + "gene_synonym", + "NP_416337.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Y6" + ], + [ + "gene_synonym", + "b1823" + ], + [ + "gene_synonym", + "cspC" + ], + [ + "gene_synonym", + "msmB" + ] + ], + "dna_sequence": "ATGGCAAAGATTAAAGGTCAGGTTAAGTGGTTCAACGAGTCTAAAGGTTTTGGCTTCATTACTCCGGCTGATGGCAGCAAAGATGTGTTCGTACACTTCTCCGCTATCCAGGGTAATGGCTTCAAAACTCTGGCTGAAGGTCAGAACGTTGAGTTCGAAATTCAGGACGGCCAGAAAGGTCCGGCAGCTGTTAACGTAACAGCTATCTGA", + "dna_sequence_length": 210, + "functions": [ + "stress protein, member of the CspA-family" + ], + "id": "CDS_1814", + "location": [ + [ + "NC_000913", + 1907435, + "-", + 210 + ] + ], + "md5": "217ff7976bb3c819231b5eecab59a918", + "parent_gene": "", + "protein_md5": "2438b21594d2be1ec72263acfe9ba76f", + "protein_translation": "MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVTAI", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006072" + ], + [ + "gene_synonym", + "ECK1822" + ], + [ + "gene_synonym", + "EcoGene:EG14382" + ], + [ + "gene_synonym", + "GI:16129778" + ], + [ + "gene_synonym", + "GeneID:946338" + ], + [ + "gene_synonym", + "JW1813" + ], + [ + "gene_synonym", + "NP_416338.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64508" + ], + [ + "gene_synonym", + "b1824" + ], + [ + "gene_synonym", + "yobF" + ] + ], + "dna_sequence": "ATGTGTGGCATTTTCAGTAAAGAAGTCCTGAGTAAACACGTTGACGTTGAATACCGCTTCTCTGCCGAGCCTTATATTGGTGCCTCATGCAGTAATGTGTCAGTTTTATCTATGTTATGCCTGCGGGCGAAGAAAACAATCTAA", + "dna_sequence_length": 144, + "functions": [ + "DUF2527 family heat-induced protein" + ], + "id": "CDS_1815", + "location": [ + [ + "NC_000913", + 1907591, + "-", + 144 + ] + ], + "md5": "0353efcf26bbb24fe03a8de6ae7a1e7c", + "parent_gene": "", + "protein_md5": "9030c1c05bccbd63c9ee00333b30276d", + "protein_translation": "MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAKKTI", + "protein_translation_length": 47, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006075" + ], + [ + "gene_synonym", + "ECK1823" + ], + [ + "gene_synonym", + "EcoGene:EG14014" + ], + [ + "gene_synonym", + "GI:16129779" + ], + [ + "gene_synonym", + "GeneID:946350" + ], + [ + "gene_synonym", + "JW1814" + ], + [ + "gene_synonym", + "NP_416339.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64499" + ], + [ + "gene_synonym", + "b1825" + ], + [ + "gene_synonym", + "yebO" + ] + ], + "dna_sequence": "ATGAACGAAGTTGTAAATTCAGGCGTGATGAACATTGCGTCTTTGGTTGTATCGGTGGTGGTTCTTCTTATCGGGCTCATCTTGTGGTTTTTTATCAATCGTGCCAGTTCACGGACTAACGAACAGATTGAACTGCTTGAGGCGTTGCTGGATCAGCAAAAACGTCAAAATGCACTGTTACGTCGTTTGTGCGAAGCAAACGAACCAGAGAAAGCAGATAAAAAGACCGTTGAGAGTCAAAAATCGGTTGAAGACGAAGATATTATTCGTCTGGTCGCCGAACGATAA", + "dna_sequence_length": 288, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_1816", + "location": [ + [ + "NC_000913", + 1908548, + "-", + 288 + ] + ], + "md5": "c1ca43b3931ec3673b556bada6ae112d", + "parent_gene": "", + "protein_md5": "7f0d0bca562eeaf47b0b6aa2a0147d5b", + "protein_translation": "MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIELLEALLDQQKRQNALLRRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006078" + ], + [ + "gene_synonym", + "ECK1824" + ], + [ + "gene_synonym", + "EcoGene:EG14383" + ], + [ + "gene_synonym", + "GI:16129780" + ], + [ + "gene_synonym", + "GeneID:946351" + ], + [ + "gene_synonym", + "JW1815" + ], + [ + "gene_synonym", + "NP_416340.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64512" + ], + [ + "gene_synonym", + "b1826" + ], + [ + "gene_synonym", + "mgrB" + ], + [ + "gene_synonym", + "yobG" + ] + ], + "dna_sequence": "GTGAAAAAGTTTCGATGGGTCGTTCTGGTTGTCGTGGTGTTGGCTTGCTTGCTGCTTTGGGCGCAGGTATTCAACATGATGTGCGATCAGGATGTACAATTTTTCAGCGGAATTTGTGCCATTAACCAGTTTATCCCGTGGTGA", + "dna_sequence_length": 144, + "functions": [ + "regulatory peptide for PhoPQ, feedback inhibition" + ], + "id": "CDS_1817", + "location": [ + [ + "NC_000913", + 1908766, + "-", + 144 + ] + ], + "md5": "8ec3332f9e31f66b91b2129a4e43f110", + "parent_gene": "", + "protein_md5": "f991b6c9251fb6684297a1ec9f6c5669", + "protein_translation": "MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQFIPW", + "protein_translation_length": 47, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285057" + ], + [ + "gene_synonym", + "ECK1825" + ], + [ + "gene_synonym", + "EcoGene:EG14424" + ], + [ + "gene_synonym", + "GI:94541114" + ], + [ + "gene_synonym", + "GeneID:1450271" + ], + [ + "gene_synonym", + "JW5298" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2MB16" + ], + [ + "gene_synonym", + "YP_588456.1" + ], + [ + "gene_synonym", + "b4536" + ], + [ + "gene_synonym", + "yobH" + ] + ], + "dna_sequence": "ATGCGATTCATCATTCGCACAGTTATGCTGATAGCACTGGTATGGATAGGATTATTACTCAGCGGATATGGCGTTTTGATTGGAAGCAAAGAGAATGCCGCAGGATTAGGTTTGCAATGTACCTATCTGACTGCCAGAGGCACCAGCACGGTACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAA", + "dna_sequence_length": 240, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1818", + "location": [ + [ + "NC_000913", + 1908925, + "+", + 240 + ] + ], + "md5": "675ba4353adaf56da833ba94681e9e1a", + "parent_gene": "", + "protein_md5": "50742b438fde18c9298f5c246d366197", + "protein_translation": "MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006081" + ], + [ + "gene_synonym", + "ECK1826" + ], + [ + "gene_synonym", + "EcoGene:EG14018" + ], + [ + "gene_synonym", + "GI:16129781" + ], + [ + "gene_synonym", + "GeneID:946129" + ], + [ + "gene_synonym", + "JW1816" + ], + [ + "gene_synonym", + "NP_416341.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76268" + ], + [ + "gene_synonym", + "b1827" + ], + [ + "gene_synonym", + "kdgR" + ], + [ + "gene_synonym", + "yebP" + ] + ], + "dna_sequence": "ATGGCTAACGCAGATCTGGATAAACAGCCTGATTCTGTATCTTCCGTGCTAAAAGTTTTTGGCATTTTGCAGGCGCTGGGTGAAGAGCGCGAAATAGGGATAACCGAGCTGTCGCAGCGCGTCATGATGTCAAAAAGCACCGTTTATCGCTTTTTACAGACCATGAAAACCTTAGGTTATGTGGCGCAGGAAGGGGAGTCGGAGAAATATTCCCTGACCCTGAAATTGTTTGAACTGGGCGCTCGCGCGTTACAAAACGTCGATTTAATTCGTAGCGCAGATATCCAGATGCGTGAGCTCTCCCGCCTGACCAAAGAAACTATCCACCTCGGCGCACTGGACGAAGACAGTATTGTTTACATTCACAAAATTGACTCTATGTACAATTTGCGCATGTATTCACGGATTGGGCGTCGTAATCCGCTGTACAGCACCGCGATTGGTAAGGTACTGCTGGCATGGCGCGATCGCGATGAAGTGAAGCAAATTCTTGAGGGCGTGGAGTATAAACGCAGTACCGAGCGGACCATCACCAGTACAGAAGCGTTATTACCCGTTCTGGACCAGGTGCGCGAGCAGGGGTATGGCGAAGATAATGAAGAGCAGGAAGAAGGGCTGCGATGCATTGCGGTACCGGTATTTGATCGCTTTGGCGTGGTCATTGCCGGTTTGAGCATCTCCTTCCCGACGTTGCGTTTCTCTGAAGAGCGTTTACAGGAATATGTCGCAATGTTGCATACCGCAGCGCGCAAAATTTCTGCCCAAATGGGTTATCACGACTATCCGTTCTGA", + "dna_sequence_length": 792, + "functions": [ + "KDG regulon transcriptional repressor" + ], + "id": "CDS_1819", + "location": [ + [ + "NC_000913", + 1910099, + "-", + 792 + ] + ], + "md5": "2cd830b938123cc91312f5ea39644ffc", + "parent_gene": "", + "protein_md5": "0ff36b3aba1ff928e34ce9e69083cf4f", + "protein_translation": "MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSRLTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006085" + ], + [ + "gene_synonym", + "ECK1827" + ], + [ + "gene_synonym", + "EcoGene:EG14019" + ], + [ + "gene_synonym", + "GI:90111339" + ], + [ + "gene_synonym", + "GeneID:946048" + ], + [ + "gene_synonym", + "JW5299" + ], + [ + "gene_synonym", + "NP_416342.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76269" + ], + [ + "gene_synonym", + "b1828" + ], + [ + "gene_synonym", + "yebQ" + ] + ], + "dna_sequence": "ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCATGCCACGCCAGCCAGTTCCATCTGGGTAGTGAACGCCTATCAAATCGCCATTGTCATCTCCCTGCTCTCGTTTTCGTTTCTGGGCGATATGTTTGGCTATCGACGTATTTATAAATGCGGTCTGGTCGTTTTTCTGTTGTCTTCACTGTTCTGCGCCCTTTCTGATTCGCTGCAAATGCTCACCCTTGCGCGTGTCATACAAGGTTTCGGCGGTGCAGCGTTGATGAGCGTTAATACCGCACTTATCCGCCTGATCTATCCACAACGTTTTCTGGGTAGAGGGATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACGTTAATTGCTGCGGAACTGGTGGTAATGGTTGTTGTTGGTATTTTCTTTATTCGCCGCCAGCTTTCTCTTCCCGTACCGCTGCTACCGGTGGATTTACTGCGTATCCCGCTGTTTTCACTTTCTATTTGCACATCTGTTTGCTCTTTCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAA", + "dna_sequence_length": 1374, + "functions": [ + "putative transporter" + ], + "id": "CDS_1820", + "location": [ + [ + "NC_000913", + 1910276, + "+", + 1374 + ] + ], + "md5": "c3d61589b4e4d368e732aabb61335d4d", + "parent_gene": "", + "protein_md5": "af26563a823a2549085c83423da3a0d6", + "protein_translation": "MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRITQPRSRA", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006087" + ], + [ + "gene_synonym", + "ECK1828" + ], + [ + "gene_synonym", + "EcoGene:EG10462" + ], + [ + "gene_synonym", + "GI:16129783" + ], + [ + "gene_synonym", + "GeneID:946076" + ], + [ + "gene_synonym", + "JW1818" + ], + [ + "gene_synonym", + "NP_416343.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23894" + ], + [ + "gene_synonym", + "b1829" + ], + [ + "gene_synonym", + "htpX" + ] + ], + "dna_sequence": "ATGATGCGAATCGCGCTCTTCCTGCTAACGAACCTGGCCGTAATGGTCGTTTTCGGGCTGGTACTGAGCCTGACAGGGATACAGTCGAGCAGCGTTCAGGGGCTGATGATCATGGCCTTGCTGTTCGGTTTTGGTGGTTCCTTCGTTTCGCTTCTGATGTCCAAATGGATGGCATTACGATCTGTTGGCGGGGAAGTGATCGAGCAACCGCGTAACGAAAGGGAACGTTGGCTGGTCAATACTGTAGCAACCCAGGCTCGTCAGGCGGGGATCGCTATGCCGCAAGTGGCTATCTACCATGCGCCGGACATCAACGCTTTTGCAACCGGTGCGCGCCGTGATGCCTCTCTGGTTGCTGTCAGCACCGGTTTGCTGCAGAACATGAGCCCGGATGAAGCCGAGGCGGTAATTGCTCACGAAATCAGCCACATCGCCAATGGTGATATGGTCACCATGACGCTGATTCAGGGCGTGGTGAACACCTTCGTTATCTTTATTTCCCGTATTCTGGCGCAGCTTGCCGCGGGTTTTATGGGCGGAAATCGTGATGAAGGTGAAGAGAGCAACGGCAACCCGCTGATCTACTTTGCGGTTGCAACGGTTCTGGAACTGGTGTTTGGTATTCTGGCGAGCATTATCACCATGTGGTTCTCGCGTCATCGTGAATTCCATGCTGATGCCGGTTCGGCAAAACTGGTTGGTCGCGAGAAAATGATTGCCGCGCTGCAGCGCCTGAAAACCAGCTATGAACCGCAAGAAGCAACCAGCATGATGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAA", + "dna_sequence_length": 882, + "functions": [ + "putative endopeptidase" + ], + "id": "CDS_1821", + "location": [ + [ + "NC_000913", + 1912576, + "-", + 882 + ] + ], + "md5": "129e537637b00d1121e261ffd5e0b56a", + "parent_gene": "", + "protein_md5": "e46ab2b6c151c262d13378131716f9da", + "protein_translation": "MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFGGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPDINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMALCINGKSKSLSELFMTHPPLDKRIEALRTGEYLK", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006090" + ], + [ + "gene_synonym", + "ECK1829" + ], + [ + "gene_synonym", + "EcoGene:EG10760" + ], + [ + "gene_synonym", + "GI:16129784" + ], + [ + "gene_synonym", + "GeneID:946096" + ], + [ + "gene_synonym", + "JW1819" + ], + [ + "gene_synonym", + "NP_416344.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23865" + ], + [ + "gene_synonym", + "b1830" + ], + [ + "gene_synonym", + "prc" + ], + [ + "gene_synonym", + "tsp" + ] + ], + "dna_sequence": "ATGAACATGTTTTTTAGGCTTACCGCGTTAGCTGGCCTGCTTGCAATAGCAGGCCAGACCTTCGCTGTAGAAGATATCACGCGTGCTGATCAAATTCCGGTATTAAAGGAAGAGACGCAGCATGCGACGGTAAGTGAGCGCGTAACGTCGCGCTTCACCCGTTCTCATTATCGCCAGTTCGACCTCGATCAGGCATTTTCGGCCAAAATCTTTGACCGCTACCTGAATCTGCTCGATTACAGCCACAACGTGCTGCTGGCAAGCGATGTTGAACAGTTCGCGAAAAAGAAAACCGAGTTAGGCGATGAACTGCGTTCAGGCAAACTCGACGTTTTCTACGATCTCTACAATCTGGCGCAAAAGCGCCGTTTTGAGCGTTACCAGTACGCTTTGTCGGTACTGGAAAAGCCGATGGATTTCACCGGCAACGACACTTATAACCTTGACCGCAGCAAAGCGCCCTGGCCGAAAAACGAGGCTGAGTTGAACGCGCTGTGGGACAGTAAAGTCAAATTCGACGAGTTAAGCCTGAAGCTGACAGGAAAAACGGATAAAGAAATTCGTGAAACCCTGACTCGCCGCTACAAATTTGCCATTCGTCGTCTGGCGCAAACCAACAGCGAAGATGTTTTCTCGCTGGCAATGACGGCGTTTGCGCGTGAAATCGACCCGCATACCAACTATCTTTCCCCGCGTAATACCGAACAGTTCAACACTGAAATGAGTTTGTCGCTGGAAGGTATTGGCGCAGTGCTGCAAATGGATGATGACTACACCGTTATCAATTCGATGGTGGCAGGTGGTCCGGCAGCGAAGAGTAAAGCTATCAGCGTTGGTGACAAAATTGTCGGTGTTGGTCAAACAGGCAAGCCGATGGTTGACGTGATTGGCTGGCGTCTTGATGATGTGGTTGCCTTAATTAAAGGGCCGAAGGGCAGTAAAGTTCGTCTGGAAATTTTACCTGCTGGTAAAGGGACCAAGACCCGTACTGTAACGTTGACCCGTGAACGTATTCGTCTCGAAGACCGCGCGGTTAAAATGTCGGTGAAGACCGTCGGTAAAGAGAAAGTCGGCGTGCTGGATATTCCGGGCTTCTATGTGGGTTTGACAGACGATGTCAAAGTGCAACTGCAGAAACTGGAAAAACAGAATGTCAGCAGCGTCATCATCGACCTGCGTAGCAATGGCGGTGGGGCGTTAACTGAAGCCGTATCGCTCTCCGGTCTGTTTATTCCTGCGGGTCCCATTGTTCAGGTCCGCGATAACAACGGCAAGGTTCGTGAAGATAGCGATACCGACGGACAGGTTTTCTATAAAGGCCCGCTGGTGGTGCTGGTTGACCGCTTCAGTGCTTCGGCTTCAGAAATCTTTGCCGCGGCAATGCAGGATTACGGTCGTGCGCTGGTTGTGGGTGAACCGACGTTTGGTAAAGGCACCGTTCAGCAATACCGTTCATTGAACCGTATTTACGATCAGATGTTACGTCCTGAATGGCCAGCGCTGGGTTCTGTGCAGTACACGATCCAGAAATTCTATCGCGTTAACGGCGGCAGTACGCAACGTAAAGGCGTAACGCCAGACATCATCATGCCGACGGGTAATGAAGAAACGGAAACGGGTGAGAAATTCGAAGATAACGCGCTGCCGTGGGATAGCATTGATGCCGCGACTTATGTGAAATCAGGAGATTTAACGGCCTTTGAACCGGAGCTGCTGAAGGAACATAATGCGCGTATCGCGAAAGATCCTGAGTTCCAGAACATCATGAAGGATATCGCGCGCTTCAACGCTATGAAGGACAAGCGCAATATCGTTTCTCTGAATTACGCTGTGCGTGAGAAAGAGAATAATGAAGATGATGCGACGCGTCTGGCGCGTTTGAACGAACGCTTTAAACGCGAAGGTAAACCGGAGTTGAAGAAACTGGATGATCTACCGAAAGATTACCAGGAGCCGGATCCTTATCTGGATGAGACGGTGAATATCGCACTCGATCTGGCGAAGCTTGAAAAAGCCAGACCCGCGGAACAACCCGCTCCCGTCAAGTAA", + "dna_sequence_length": 2049, + "functions": [ + "carboxy-terminal protease for penicillin-binding protein 3" + ], + "id": "CDS_1822", + "location": [ + [ + "NC_000913", + 1914816, + "-", + 2049 + ] + ], + "md5": "a0476dbf2caa13c0b0b2df630ae1f7ab", + "parent_gene": "", + "protein_md5": "4f3cb867b7de11b254b4a21b7e0da081", + "protein_translation": "MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK", + "protein_translation_length": 682, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006092" + ], + [ + "gene_synonym", + "ECK1830" + ], + [ + "gene_synonym", + "EcoGene:EG12866" + ], + [ + "gene_synonym", + "GI:49176156" + ], + [ + "gene_synonym", + "GeneID:948950" + ], + [ + "gene_synonym", + "JW5300" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45577" + ], + [ + "gene_synonym", + "YP_026161.1" + ], + [ + "gene_synonym", + "b1831" + ], + [ + "gene_synonym", + "proQ" + ], + [ + "gene_synonym", + "yebJ" + ], + [ + "gene_synonym", + "yobE" + ], + [ + "gene_synonym", + "yoeC" + ] + ], + "dna_sequence": "ATGGAAAATCAACCTAAGTTGAATAGCAGTAAAGAAGTAATCGCGTTTCTGGCCGAACGTTTTCCCCACTGTTTCAGTGCGGAAGGTGAAGCGCGTCCGCTGAAAATCGGTATTTTTCAGGATTTGGTCGATCGTGTTGCTGGGGAAATGAACCTGAGCAAAACGCAATTGCGATCCGCTTTACGTCTCTACACTTCGAGCTGGCGTTATCTTTACGGTGTTAAACCCGGCGCAACGCGTGTCGATCTTGACGGCAACCCATGCGGTGAGCTGGACGAGCAACATGTAGAGCATGCTCGCAAGCAGCTTGAAGAAGCGAAAGCGCGTGTTCAGGCACAGCGTGCTGAACAGCAAGCGAAAAAACGCGAAGCTGCCGCAACTGCTGGTGAGAAAGAAGACGCACCGCGCCGCGAACGCAAGCCACGTCCGACTACGCCACGCCGCAAAGAAGGCGCTGAACGTAAACCTCGTGCGCAAAAGCCGGTAGAGAAAGCGCCAAAAACAGTAAAAGCACCTCGCGAAGAACAGCACACCCCGGTTTCTGACATTTCAGCTCTGACTGTCGGACAAGCCCTGAAGGTGAAAGCGGGTCAAAACGCGATGGATGCCACCGTATTAGAAATCACCAAAGACGGCGTCCGCGTCCAGCTGAATTCGGGTATGTCTTTGATTGTGCGCGCAGAACACCTGGTGTTCTGA", + "dna_sequence_length": 699, + "functions": [ + "RNA chaperone, putative ProP translation regulator" + ], + "id": "CDS_1823", + "location": [ + [ + "NC_000913", + 1915534, + "-", + 699 + ] + ], + "md5": "3d840c14343b3e896901f2fae51edbf0", + "parent_gene": "", + "protein_md5": "c36e50bc6de35773fd97b65e8aeeab07", + "protein_translation": "MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAATAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006095" + ], + [ + "gene_synonym", + "ECK1831" + ], + [ + "gene_synonym", + "EcoGene:EG14020" + ], + [ + "gene_synonym", + "GI:171701682" + ], + [ + "gene_synonym", + "GeneID:946086" + ], + [ + "gene_synonym", + "JW1821" + ], + [ + "gene_synonym", + "NP_416346.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76270" + ], + [ + "gene_synonym", + "b1832" + ], + [ + "gene_synonym", + "msrC" + ], + [ + "gene_synonym", + "yebR" + ] + ], + "dna_sequence": "ATGAACAAAACAGAATTTTACGCGGATTTAAATCGCGACTTTAACGCGCTGATGGCGGGAGAAACCAGTTTTCTGGCAACGCTTGCGAACACCAGTGCGTTGTTATATGAGCGTCTCACTGACATAAACTGGGCAGGTTTTTATTTGCTTGAGGACGATACACTGGTACTCGGACCATTTCAGGGCAAAATTGCCTGTGTCCGGATACCCGTCGGGCGCGGCGTGTGCGGCACTGCGGTTGCCCGCAATCAAGTGCAGCGTATCGAGGATGTTCATGTGTTTGACGGGCATATTGCCTGTGATGCGGCGAGTAATTCTGAAATTGTTCTGCCGCTGGTGGTGAAAAATCAGATTATTGGTGTTCTCGACATCGATAGTACCGTCTTCGGTCGCTTTACAGACGAGGACGAGCAAGGCTTACGTCAGCTTGTGGCACAGCTTGAAAAAGTGCTTGCAACGACGGATTACAAAAAATTCTTTGCGAGCGTCGCAGGATAA", + "dna_sequence_length": 498, + "functions": [ + "free methionine-(R)-sulfoxide reductase" + ], + "id": "CDS_1824", + "location": [ + [ + "NC_000913", + 1916128, + "-", + 498 + ] + ], + "md5": "27cf720ea15ceb8aad0bf6d407a767f3", + "parent_gene": "", + "protein_md5": "6941d282316ecc44555eb014ec962992", + "protein_translation": "MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006098" + ], + [ + "gene_synonym", + "ECK1832" + ], + [ + "gene_synonym", + "EcoGene:EG14021" + ], + [ + "gene_synonym", + "GI:16129786" + ], + [ + "gene_synonym", + "GeneID:946353" + ], + [ + "gene_synonym", + "JW1822" + ], + [ + "gene_synonym", + "NP_416347.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD03" + ], + [ + "gene_synonym", + "b1833" + ], + [ + "gene_synonym", + "yebS" + ] + ], + "dna_sequence": "ATGGCTCTTAACACACCACAAATTACGCCGACAAAAAAGATAACAGTGAGGGCAATCGGCGAGGAACTGCCGCGTGGTGATTACCAACGTTGCCCGCAATGTGACATGCTGTTTAGCCTGCCCGAGATAAATTCTCATCAAAGTGCCTATTGTCCGCGCTGTCAGGCAAAAATTCGTGACGGGCGCGACTGGTCGCTAACGCGCCTGGCGGCAATGGCCTTCACCATGCTGTTGCTTATGCCGTTTGCCTGGGGCGAACCGCTGTTGCATATCTGGCTGTTAGGCATTCGTATTGACGCCAACGTTATGCAAGGCATCTGGCAAATGACCAAACAGGGCGATGCGATAACGGGGTCGATGGTCTTTTTCTGCGTTATTGGTGCCCCGCTCATTCTGGTGACCTCCATAGCTTATTTATGGTTTGGTAACCGACTGGGAATGAATTTACGTCCGGTACTGCTGATGCTTGAGCGACTTAAAGAGTGGGTAATGCTCGATATCTACCTGGTCGGCATTGGCGTTGCTTCTATAAAGGTACAGGATTATGCCCATATCCAGGCTGGTGTCGGCTTGTTCTCTTTTGTGGCGTTGGTGATTTTAACGACGGTGACGTTGTCACATCTTAATGTCGAAGAACTGTGGGAGCGATTTTATCCGCAGCGCCCCGCTACGCGTAGGGACGAGAAACTTCGTGTCTGTCTTGGGTGCCATTTTACCGGCTATCCAGATCAGCGTGGTCGCTGCCCGCGTTGCCATATCCCGCTACGCCTGCGTCGCCGTCATAGTCTGCAAAAATGCTGGGCGGCGCTGTTAGCGTCAATCGTTTTATTGTTACCTGCCAACCTGTTGCCTATTTCTATCATTTATCTGAACGGAGGACGGCAGGAAGATACAATTCTTTCCGGAATTATGTCGCTGGCAAGTAGCAACATTGCGGTTGCAGGAATCGTGTTTATCGCCAGTATTCTGGTACCGTTTACTAAAGTGATCGTCATGTTCACTTTACTGTTGAGCATTCATTTTAAATGCCAGCAAGGTTTACGCACACGCATTCTGTTACTGCGGATGGTGACCTGGATTGGTCGCTGGTCGATGCTCGACCTGTTTGTCATATCTTTAACCATGTCGCTGATTAATCGCGATCAGATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGA", + "dna_sequence_length": 1284, + "functions": [ + "inner membrane PqiA domain protein" + ], + "id": "CDS_1825", + "location": [ + [ + "NC_000913", + 1916258, + "+", + 1284 + ] + ], + "md5": "d9178fb6b92e920354e3167cb7cda68a", + "parent_gene": "", + "protein_md5": "135f12e1025f0da4ffc984ffdf369c78", + "protein_translation": "MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006101" + ], + [ + "gene_synonym", + "ECK1833" + ], + [ + "gene_synonym", + "EcoGene:EG14022" + ], + [ + "gene_synonym", + "GI:90111340" + ], + [ + "gene_synonym", + "GeneID:946352" + ], + [ + "gene_synonym", + "JW1823" + ], + [ + "gene_synonym", + "NP_416348.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76272" + ], + [ + "gene_synonym", + "b1834" + ], + [ + "gene_synonym", + "yebT" + ] + ], + "dna_sequence": "ATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACTCAGTTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATATCGGCATGATGCCGGGTAAAGGTAAAGAGCAGGATCACTTTGTCGCACTCGATACCCAACCGAAATATCGGCTGGACAATGGCGATCTGATGATCCACCTGCAAGCCCCCGATCTCGGTTCGCTGAACAGCGGTTCATTGGTCTATTTCCGCAAGATCCCGGTGGGAAAAGTCTACGACTATGCCATCAATCCCAACAAGCAAGGCGTGGTGATTGATGTCCTGATCGAGCGGCGTTTTACCGATCTGGTGAAAAAAGGTAGCCGTTTCTGGAACGTTTCCGGCGTTGATGCCAACGTCAGTATCAGTGGCGCGAAGGTGAAACTGGAAAGCCTGGCGGCACTGGTTAACGGTGCGATTGCCTTCGATTCACCAGAAGAGTCGAAACCTGCCGAGGCGGAAGATACCTTTGGTCTGTATGAAGATCTGGCCCACAGCCAGCGTGGCGTAATAATAAAACTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGCGTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGCTGGAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCGCAACCTTCTGACCAGCAATAGCGTGTTCTGGGCAGAAGGCGGGGCGAAAGTTCAGCTGAATGGTAGTGGTCTGACCGTACAGGCATCCCCGCTCTCCAGAGCATTAAAGGGAGCCATTAGCTTCGACAACCTCAGCGGTGCCAGCGCCAGTCAGCGTAAAGGCGATAAGCGTATTCTGTATGCTTCCGAAACAGCGGCCCGTGCGGTTGGCGGGCAGATTACGCTTCACGCTTTCGATGCCGGAAAACTGGCGGTCGGGATGCCAATTCGCTATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGCCGTATATCAACGTCGAACCAGGCCGGGGCAATCCTCGCCGCGACTTTGAATTACAAGAGGCCACCATTACTGATTCGCGTTACCTGGATGGCTTAAGCATTATTGTTGAAGCGCCGGAAGCCGGTTCGTTAGGCATCGGTACGCCTGTGCTGTTCCGTGGTCTGGAAGTCGGTACGGTTACAGGAATGACGCTGGGGACATTGTCAGATCGCGTGATGATTGCGATGCGCATCAGTAAACGCTATCAACACCTGGTGCGTAACAATTCCGTCTTCTGGTTGGCATCGGGTTACAGTCTGGACTTTGGTCTGACGGGCGGCGTAGTGAAAACCGGCACCTTTAACCAGTTTATCCGTGGCGGCATCGCCTTCGCCACGCCTCCGGGTACGCCACTGGCACCGAAAGCCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAA", + "dna_sequence_length": 2634, + "functions": [ + "MCE domain protein" + ], + "id": "CDS_1826", + "location": [ + [ + "NC_000913", + 1917510, + "+", + 2634 + ] + ], + "md5": "b8ba16873fb1d16b6e19bdafe9b43b3b", + "parent_gene": "", + "protein_md5": "8b5afe2672458ebf39e6cf1a6703b5e8", + "protein_translation": "MSQETPASTTEAQIKNKRRISPFWLLPFIALMIASWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK", + "protein_translation_length": 877, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006106" + ], + [ + "gene_synonym", + "ECK1834" + ], + [ + "gene_synonym", + "EcoGene:EG14023" + ], + [ + "gene_synonym", + "GI:90111341" + ], + [ + "gene_synonym", + "GeneID:946348" + ], + [ + "gene_synonym", + "JW5301" + ], + [ + "gene_synonym", + "NP_416349.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76273" + ], + [ + "gene_synonym", + "b1835" + ], + [ + "gene_synonym", + "rsmF" + ], + [ + "gene_synonym", + "yebU" + ] + ], + "dna_sequence": "GTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTCCCTGCTCTGGCGAAGGCGTGGTGCGTAAAGATCCCGATGCGCTAAAAAACTGGTCACCAGAAAGCAATCAGGAAATCGCAGCTACACAACGGGAGCTTATCGACAGCGCCTTTCATGCATTACGTCCTGGTGGTACGCTGGTTTACTCGACCTGTACCTTAAACCAGGAAGAAAACGAAGCCGTTTGCCTGTGGCTGAAAGAGACTTACCCCGACGCAGTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAATTTACGACTGCGAAGGCTTCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGAAAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGA", + "dna_sequence_length": 1440, + "functions": [ + "16S rRNA m(5)C1407 methyltransferase, SAM-dependent" + ], + "id": "CDS_1827", + "location": [ + [ + "NC_000913", + 1920223, + "+", + 1440 + ] + ], + "md5": "7cbcb76efcd179aaabf55c948684440f", + "parent_gene": "", + "protein_md5": "f3d4fc0e45862fc236c4093d1db7db0f", + "protein_translation": "MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAATGVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNMNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA", + "protein_translation_length": 479, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006110" + ], + [ + "gene_synonym", + "ECK1835" + ], + [ + "gene_synonym", + "EcoGene:EG14024" + ], + [ + "gene_synonym", + "GI:90111342" + ], + [ + "gene_synonym", + "GeneID:946347" + ], + [ + "gene_synonym", + "JW5302" + ], + [ + "gene_synonym", + "NP_416350.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64503" + ], + [ + "gene_synonym", + "b1836" + ], + [ + "gene_synonym", + "yebV" + ] + ], + "dna_sequence": "ATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGA", + "dna_sequence_length": 237, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1828", + "location": [ + [ + "NC_000913", + 1921780, + "+", + 237 + ] + ], + "md5": "8c0b606d8accc1dcbc43864c6b1a5660", + "parent_gene": "", + "protein_md5": "5bff90af6815e1bc33556196ce21148c", + "protein_translation": "MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006112" + ], + [ + "gene_synonym", + "ECK1836" + ], + [ + "gene_synonym", + "EcoGene:EG14025" + ], + [ + "gene_synonym", + "GI:90111343" + ], + [ + "gene_synonym", + "GeneID:946354" + ], + [ + "gene_synonym", + "JW5303" + ], + [ + "gene_synonym", + "NP_416351.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76275" + ], + [ + "gene_synonym", + "b1837" + ], + [ + "gene_synonym", + "yebW" + ] + ], + "dna_sequence": "ATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATATTGTTGTGGATGTCTACAACACGGAACAGCAGTGTCTTTATTCTATGAGCGATCAACGGATCCGCCAGGGCGGTTGTTTTCCGATTGAGGATTTTATAGATGGTTTCTGGCGACCTGCACAGGAGTACGGTGATTTTTAA", + "dna_sequence_length": 192, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1829", + "location": [ + [ + "NC_000913", + 1922121, + "+", + 192 + ] + ], + "md5": "7a33a9550c4f0d4f1bb7c9ceb3e2b7ad", + "parent_gene": "", + "protein_md5": "4036eba6ea3efdae5df69e700ae474f2", + "protein_translation": "MFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006114" + ], + [ + "gene_synonym", + "ECK1837" + ], + [ + "gene_synonym", + "EcoGene:EG14026" + ], + [ + "gene_synonym", + "GI:90111344" + ], + [ + "gene_synonym", + "GeneID:946356" + ], + [ + "gene_synonym", + "JW1827" + ], + [ + "gene_synonym", + "NP_416352.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55798" + ], + [ + "gene_synonym", + "b1838" + ], + [ + "gene_synonym", + "pphA" + ], + [ + "gene_synonym", + "prpA" + ], + [ + "gene_synonym", + "yebX" + ] + ], + "dna_sequence": "ATGAAACAGCCTGCGCCCGTTTATCAGAGAATTGCGGGTCATCAATGGCGACATATCTGGCTTTCTGGCGATATACACGGTTGTCTTGAGCAGTTGCGCCGCAAATTATGGCATTGTCGTTTTGATCCGTGGCGAGATTTACTTATCTCAGTGGGAGACGTTATCGATCGTGGGCCGCAAAGTTTACGTTGTCTGCAGTTACTGGAACAACATTGGGTTTGTGCGGTAAGAGGCAATCATGAACAGATGGCGATGGATGCGCTGGCATCCCAGCAGATGTCTTTGTGGTTGATGAATGGCGGCGACTGGTTTATTGCGCTGGCAGATAATCAACAGAAACAAGCGAAAACGGCGCTGGAAAAATGTCAGCATTTGCCCTTTATTCTTGAAGTACACAGTCGCACCGGCAAGCATGTTATTGCTCATGCCGATTATCCAGATGATGTTTATGAATGGCAAAAGGACGTTGATTTGCATCAGGTCTTGTGGAGCCGCTCGCGATTAGGTGAACGCCAAAAAGGGCAGGGAATTACAGGTGCTGATCATTTCTGGTTTGGTCATACACCGTTGCGACATCGCGTGGATATTGGCAACCTGCATTATATTGATACCGGTGCTGTCTTTGGGGGCGAACTGACTCTTGTGCAATTGCAATAA", + "dna_sequence_length": 657, + "functions": [ + "serine/threonine-specific protein phosphatase 1" + ], + "id": "CDS_1830", + "location": [ + [ + "NC_000913", + 1922969, + "-", + 657 + ] + ], + "md5": "fdfbec765017074658d642778b1a8baa", + "parent_gene": "", + "protein_md5": "4acf18368e9203a4c0f68a87f75524db", + "protein_translation": "MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006118" + ], + [ + "gene_synonym", + "ECK1840" + ], + [ + "gene_synonym", + "EcoGene:EG14027" + ], + [ + "gene_synonym", + "GI:16129792" + ], + [ + "gene_synonym", + "GeneID:947014" + ], + [ + "gene_synonym", + "JW1828" + ], + [ + "gene_synonym", + "NP_416353.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64506" + ], + [ + "gene_synonym", + "b1839" + ], + [ + "gene_synonym", + "yebY" + ] + ], + "dna_sequence": "ATGATGAAAAAAAGTATTCTGGCGTTTCTGTTACTCACCAGTTCTGCAGCGGCGCTGGCTGCACCGCAGGTGATTACCGTCAGTCGTTTTGAAGTGGGTAAAGACAAATGGGCGTTTAATCGCGAAGAGGTGATGCTGACTTGCCGACCGGGTAATGCTTTGTATGTTATTAATCCGAGTACCCTCGTGCAGTATCCTTTAAACGATATCGCACAAAAGGAAGTTGCCAGTGGGAAGACCAATGCCCAACCCATTTCGGTGATTCAGATTGATGATCCTAACAATCCCGGCGAAAAAATGAGTCTGGCACCGTTTATAGAACGAGCTGAAAAACTCTGTTAA", + "dna_sequence_length": 342, + "functions": [ + "DUF2511 family protein" + ], + "id": "CDS_1831", + "location": [ + [ + "NC_000913", + 1923706, + "-", + 342 + ] + ], + "md5": "6af33258df26daf02eab3df95a707ecb", + "parent_gene": "", + "protein_md5": "0cea6dce3ee844fdfbaa3dfde75abf19", + "protein_translation": "MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSLAPFIERAEKLC", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006120" + ], + [ + "gene_synonym", + "ECK1841" + ], + [ + "gene_synonym", + "EcoGene:EG14028" + ], + [ + "gene_synonym", + "GI:16129793" + ], + [ + "gene_synonym", + "GeneID:947078" + ], + [ + "gene_synonym", + "JW1829" + ], + [ + "gene_synonym", + "NP_416354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76278" + ], + [ + "gene_synonym", + "b1840" + ], + [ + "gene_synonym", + "yebZ" + ] + ], + "dna_sequence": "ATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACCTCGCTGATGCTGGTTTTTGGCTTCGCAATGTACGGTGCCTGGCTGGCCCCCTTGACGATTCGTCGCTTGCTGGCGAAGCGTTTTCTGCGTTTACAACAGCACGCTGCCGTCTGGAGTTTGATCAGTGCCACTGCAATGCTCGCCGTTCAGGGCGGGTTGATGGGAACGGGATGGACAGATGTATTTTCGCCAAACATTTGGCAGGCTGTTTTGCAAACGCAGTTTGGTGGCATCTGGTTATGGCAAATTGTTCTCGCCCTCGTAACGTTGATCGTCGCCCTTATGCAACCGCGGAATATGCCACGTTTGCTGTTTATGCTCACTACCGCGCAATTTATTCTGCTGGCGGGAGTGGGGCATGCGACGCTGAATGAAGGGGTAACAGCGAAAATCCATCAGACTAATCACGCGATTCACCTGATTTGTGCGGCGGCGTGGTTTGGGGGATTACTGCCGGTGCTCTGGTGTATGCAACTCATCAAAGGCCGTTGGCGACACCAGGCTATTCAGGCGCTGATGCGTTTTTCCTGGTGCGGGCATTTTGCGGTGATCGGCGTACTGGCAAGCGGCGTGCTTAATGCATTGTTGATTACCGGATTTCCCCCCACGCTTACGACTTACTGGGGCCAACTCTTATTGCTCAAAGCCATCCTGGTGATGATTATGGTGGTCATTGCGCTGGCTAATCGTTATGTTCTTGTACCGCGCATGAGGCAGGATGAAGATCGTGCGGCACCCTGGTTTGTGTGGATGACTAAACTCGAATGGGCGATAGGTGCGGTAGTGCTGGTGATCATCAGCCTGCTTGCGACTCTCGAACCTTTTTGA", + "dna_sequence_length": 873, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1832", + "location": [ + [ + "NC_000913", + 1924591, + "-", + 873 + ] + ], + "md5": "e2845007ca71fb5b8fd7bc085baa5666", + "parent_gene": "", + "protein_md5": "16f14a027c89bc68b3dda2377a4027d3", + "protein_translation": "MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006123" + ], + [ + "gene_synonym", + "ECK1842" + ], + [ + "gene_synonym", + "EcoGene:EG14029" + ], + [ + "gene_synonym", + "GI:16129794" + ], + [ + "gene_synonym", + "GeneID:948315" + ], + [ + "gene_synonym", + "JW1830" + ], + [ + "gene_synonym", + "NP_416355.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA57" + ], + [ + "gene_synonym", + "b1841" + ], + [ + "gene_synonym", + "yobA" + ] + ], + "dna_sequence": "ATGGCTTCAACTGCACGCTCCCTTCGCTACGCGCTGGCAATCCTGACCACTTCGTTGGTGACACCTTCCGTCTGGGCACATGCGCATTTAACGCATCAGTATCCTGCGGCAAACGCGCAAGTGACAGCTGCACCGCAGGCAATCACTTTAAACTTCTCGGAAGGTGTTGAAACAGGATTCAGTGGTGCAAAAATCACGGGGCCAAAAAACGAAAATATTAAAACATTACCGGCGAAGCGAAATGAGCAGGACCAAAAGCAACTGATTGTTCCACTGGCCGATTCGCTGAAACCCGGAACCTACACCGTTGACTGGCATGTTGTTTCGGTGGACGGGCATAAAACGAAAGGACACTACACCTTTAGCGTGAAATAA", + "dna_sequence_length": 375, + "functions": [ + "CopC family protein" + ], + "id": "CDS_1833", + "location": [ + [ + "NC_000913", + 1924969, + "-", + 375 + ] + ], + "md5": "d2ee997d79b30e6b87165e9101a84d0a", + "parent_gene": "", + "protein_md5": "eda5dee7e7f56e3874c10c3ee4dcad95", + "protein_translation": "MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006126" + ], + [ + "gene_synonym", + "ECK1843" + ], + [ + "gene_synonym", + "EcoGene:EG11505" + ], + [ + "gene_synonym", + "GI:16129795" + ], + [ + "gene_synonym", + "GeneID:947471" + ], + [ + "gene_synonym", + "JW1831" + ], + [ + "gene_synonym", + "NP_416356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABS8" + ], + [ + "gene_synonym", + "b1842" + ], + [ + "gene_synonym", + "holE" + ] + ], + "dna_sequence": "ATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGTTGAACGTGAACAGCCTGAACATTTGCGCAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAA", + "dna_sequence_length": 231, + "functions": [ + "DNA polymerase III, theta subunit" + ], + "id": "CDS_1834", + "location": [ + [ + "NC_000913", + 1925108, + "+", + 231 + ] + ], + "md5": "2106f410f37f891e9742c2400ade0bbe", + "parent_gene": "", + "protein_md5": "3182c2e590e2a982200fbc51cfe0daa7", + "protein_translation": "MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQPEHLRSWFRERLIAHRLASVNLSRLPYEPKLK", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006129" + ], + [ + "gene_synonym", + "ECK1844" + ], + [ + "gene_synonym", + "EcoGene:EG14030" + ], + [ + "gene_synonym", + "GI:16129796" + ], + [ + "gene_synonym", + "GeneID:948329" + ], + [ + "gene_synonym", + "JW1832" + ], + [ + "gene_synonym", + "NP_416357.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76280" + ], + [ + "gene_synonym", + "b1843" + ], + [ + "gene_synonym", + "yobB" + ] + ], + "dna_sequence": "ATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCGTTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAG", + "dna_sequence_length": 657, + "functions": [ + "C-N hydrolase family protein" + ], + "id": "CDS_1835", + "location": [ + [ + "NC_000913", + 1925440, + "+", + 657 + ] + ], + "md5": "5d1ffb339dd17c21bb1ca8301b306a63", + "parent_gene": "", + "protein_md5": "8551881d7a6c38932fa38acb68286fd2", + "protein_translation": "MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006131" + ], + [ + "gene_synonym", + "ECK1845" + ], + [ + "gene_synonym", + "EcoGene:EG14031" + ], + [ + "gene_synonym", + "GI:16129797" + ], + [ + "gene_synonym", + "GeneID:946361" + ], + [ + "gene_synonym", + "JW1833" + ], + [ + "gene_synonym", + "NP_416358.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEK0" + ], + [ + "gene_synonym", + "b1844" + ], + [ + "gene_synonym", + "exoX" + ], + [ + "gene_synonym", + "yobC" + ] + ], + "dna_sequence": "ATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAACCGTGGATTGAAGATGTGATCCCACACTATTACGGTAGTGAATGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAG", + "dna_sequence_length": 663, + "functions": [ + "exodeoxyribonuclease 10", + "DNA exonuclease X" + ], + "id": "CDS_1836", + "location": [ + [ + "NC_000913", + 1926120, + "+", + 663 + ] + ], + "md5": "99b94526e4135c5ad1c0e7a32fe4b4e2", + "parent_gene": "", + "protein_md5": "31064f5e770b03f25ececcfcbfe7f608", + "protein_translation": "MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006133" + ], + [ + "gene_synonym", + "ECK1846" + ], + [ + "gene_synonym", + "EcoGene:EG11004" + ], + [ + "gene_synonym", + "GI:16129798" + ], + [ + "gene_synonym", + "GeneID:946358" + ], + [ + "gene_synonym", + "JW1834" + ], + [ + "gene_synonym", + "NP_416359.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24555" + ], + [ + "gene_synonym", + "b1845" + ], + [ + "gene_synonym", + "opdB" + ], + [ + "gene_synonym", + "ptrB" + ], + [ + "gene_synonym", + "tlp" + ] + ], + "dna_sequence": "ATGCTACCAAAAGCCGCCCGCATTCCCCACGCCATGACGCTTCATGGCGATACGCGCATCGATAATTACTACTGGCTGCGGGACGATACGCGTTCTCAGCCAGAAGTCCTGGACTACCTGCAACAAGAAAATAGTTACGGTCATCGGGTGATGGCCTCACAACAAGCCTTGCAGGATCGCATCTTAAAGGAAATCATCGACCGCATTCCGCAACGAGAAGTTTCTGCGCCCTACATCAAAAATGGCTACCGCTATCGGCATATTTATGAACCAGGCTGTGAATATGCTATCTACCAGCGTCAATCGGCATTCAGTGAAGAGTGGGATGAGTGGGAAACATTGCTCGATGCCAATAAGCGCGCAGCTCATAGTGAGTTTTATTCGATGGGCGGAATGGCGATTACGCCCGATAACACCATTATGGCGCTGGCAGAAGATTTTCTTTCCCGACGCCAGTACGGCATTCGTTTTCGTAATCTGGAAACTGGTAACTGGTACCCGGAACTGCTGGATAACGTTGAACCCAGCTTTGTCTGGGCAAATGACTCCTGGATTTTCTACTATGTTCGCAAGCATCCGGTGACGCTGCTGCCTTATCAGGTCTGGCGTCACGCCATCGGTACGCCAGCATCGCAAGATAAACTGATCTACGAAGAAAAAGACGATACCTATTACGTCAGCCTGCATAAAACGACCTCGAAGCACTATGTAGTCATTCATTTGGCCAGCGCCACCACCAGTGAAGTTCGCCTGCTGGACGCGGAAATGGCCGATGCCGAGCCGTTTGTTTTTCTGCCGCGCCGCAAAGATCACGAATACAGCCTTGATCACTACCAGCATCGTTTTTATCTGCGTTCCAACCGCCACGGCAAAAACTTTGGCTTATACCGTACCCGTATGCGTGATGAGCAACAGTGGGAAGAGTTAATTCCGCCACGCGAAAACATCATGCTGGAAGGGTTTACGCTGTTTACCGACTGGCTGGTGGTTGAAGAGCGTCAGCGCGGGTTAACCAGTTTGCGCCAAATTAACCGCAAGACCCGGGAAGTCATTGGTATTGCCTTTGATGATCCGGCCTATGTGACCTGGATTGCCTACAATCCAGAACCTGAAACCGCGCGATTGCGTTATGGTTATTCTTCCATGACTACACCAGACACTTTGTTTGAACTGGATATGGATACCGGTGAGCGTCGTGTATTAAAACAAACGGAAGTTCCTGGTTTTTATGCGGCGAATTACCGCAGTGAACACCTGTGGATAGTCGCCCGTGATGGCGTCGAAGTTCCGGTTTCGTTGGTCTACCATCGCAAACATTTTCGCAAAGGACACAACCCGTTGCTGGTGTATGGCTATGGTTCTTACGGCGCAAGTATTGATGCCGATTTCAGTTTTAGCCGCTTGAGTTTGTTAGATCGTGGCTTTGTCTACGCCATTGTCCATGTTCGCGGCGGTGGTGAGCTGGGGCAACAATGGTACGAAGACGGAAAATTTCTGAAGAAGAAAAATACGTTTAATGATTATCTTGATGCCTGCGATGCATTGTTAAAACTGGGCTATGGCTCTCCTTCGCTTTGTTATGCGATGGGCGGGAGTGCGGGGGGCATGTTGATGGGCGTTGCAATTAATCAACGCCCGGAATTATTCCACGGCGTTATCGCCCAGGTACCGTTTGTTGATGTTGTAACAACGATGCTTGATGAATCAATTCCTCTTACCACTGGTGAGTTTGAAGAGTGGGGTAACCCGCAGGATCCGCAATATTACGAGTACATGAAAAGCTACAGCCCGTATGACAACGTCACCGCACAGGCTTATCCGCATTTACTGGTAACGACCGGTTTGCACGATTCTCAGGTGCAATATTGGGAACCGGCAAAATGGGTCGCTAAATTGCGCGAGCTGAAAACCGATGACCATCTTTTATTGCTCTGTACCGACATGGACTCAGGCCATGGCGGTAAATCTGGTCGCTTTAAATCGTACGAAGGCGTAGCGATGGAATATGCTTTTCTGGTCGCGCTGGCGCAGGGAACATTACCCGCTACGCCTGCGGACTAA", + "dna_sequence_length": 2061, + "functions": [ + "protease II" + ], + "id": "CDS_1837", + "location": [ + [ + "NC_000913", + 1928839, + "-", + 2061 + ] + ], + "md5": "c075f22580c6a1e4cec6f8585c8e3117", + "parent_gene": "", + "protein_md5": "b5b0e2da4159061a97ec3749c1bddc57", + "protein_translation": "MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQSAFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWIFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETARLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFYAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALAQGTLPATPAD", + "protein_translation_length": 686, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006137" + ], + [ + "gene_synonym", + "ECK1847" + ], + [ + "gene_synonym", + "EcoGene:EG11806" + ], + [ + "gene_synonym", + "GI:16129799" + ], + [ + "gene_synonym", + "GeneID:946355" + ], + [ + "gene_synonym", + "JW1835" + ], + [ + "gene_synonym", + "NP_416360.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33218" + ], + [ + "gene_synonym", + "b1846" + ], + [ + "gene_synonym", + "yebE" + ] + ], + "dna_sequence": "ATGGCTAACTGGTTAAATCAACTGCAATCCCTGCTTGGGCAAAGCAGTTCTTCTACCTCCTCGTCTGCGGATCAGGGATTGGTCAAACTGTTAGTGCCAGGCGCATTAGGCGGACTGGCTGGGCTGCTGGTCGCAAATAAATCAGCACGTAAACTTCTTACGAAATATGGCACCAACGCGTTACTGGTTGGCGGCGGAGCGGTAGCGGGTACGGTGCTGTGGAATAAATACAAAGATAAAATTCGCGCGGCGCATCAGGACGAACCGCAGTTTGGCGCGCAAAGTACGCCGCTGGATGAGCGTACAGCACGTTTGATCCTTGCGCTGGTCTTTGCCGCTAAAAGTGATGGTCATATTGATGCCAAAGAACGTGCGGCAATCGACCAGCAATTGCGTGGAGCCGGCGTGGAAGAGCAGGGGCGTGTACTCATTGAGCAGGCAATCGAACAACCGCTGGATCCACAACGCCTGGCTACCGGGGTCCGCAATGAAGAAGAGGCGCTGGAAATCTATTTCCTGAGTTGCGCGGCTATTGATATTGACCATTTTATGGAACGCAGTTACCTGAATGCACTGGGTGACGCGCTGAAAATCCCCCAGGATGTTCGTGACGGCATTGAACGCGATCTCGAACAGCAAAAACGCACTTTGGCGGAATAA", + "dna_sequence_length": 660, + "functions": [ + "DUF533 family inner membrane protein" + ], + "id": "CDS_1838", + "location": [ + [ + "NC_000913", + 1929707, + "-", + 660 + ] + ], + "md5": "453eb3ed7dbbd9b8146a8ccea22406ac", + "parent_gene": "", + "protein_md5": "e8d0005da3a3e49a9db4d3d95377b718", + "protein_translation": "MANWLNQLQSLLGQSSSSTSSSADQGLVKLLVPGALGGLAGLLVANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTARLILALVFAAKSDGHIDAKERAAIDQQLRGAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLAE", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006141" + ], + [ + "gene_synonym", + "ECK1848" + ], + [ + "gene_synonym", + "EcoGene:EG11807" + ], + [ + "gene_synonym", + "GI:145698278" + ], + [ + "gene_synonym", + "GeneID:946363" + ], + [ + "gene_synonym", + "JW1836" + ], + [ + "gene_synonym", + "NP_416361.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33219" + ], + [ + "gene_synonym", + "b1847" + ], + [ + "gene_synonym", + "yebF" + ] + ], + "dna_sequence": "ATGAAAAAAAGAGGGGCGTTTTTAGGGCTGTTGTTGGTTTCTGCCTGCGCATCAGTTTTCGCTGCCAATAATGAAACCAGCAAGTCGGTCACTTTCCCAAAGTGTGAAGATCTGGATGCTGCCGGAATTGCCGCGAGCGTAAAACGTGATTATCAACAAAATCGCGTGGCGCGTTGGGCAGATGATCAAAAAATTGTCGGTCAGGCCGATCCCGTGGCTTGGGTCAGTTTGCAGGACATTCAGGGTAAAGATGATAAATGGTCAGTACCGCTAACCGTGCGTGGTAAAAGTGCCGATATTCATTACCAGGTCAGCGTGGACTGCAAAGCGGGAATGGCGGAATATCAGCGGCGTTAA", + "dna_sequence_length": 357, + "functions": [ + "extracellular Colicin M immunity family protein" + ], + "id": "CDS_1839", + "location": [ + [ + "NC_000913", + 1930390, + "-", + 357 + ] + ], + "md5": "7e4cb96e405376ff14223b58dcac1990", + "parent_gene": "", + "protein_md5": "125423209b555c7db962f98b02d41e04", + "protein_translation": "MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006145" + ], + [ + "gene_synonym", + "ECK1849" + ], + [ + "gene_synonym", + "EcoGene:EG11808" + ], + [ + "gene_synonym", + "GI:16129801" + ], + [ + "gene_synonym", + "GeneID:946364" + ], + [ + "gene_synonym", + "JW1837" + ], + [ + "gene_synonym", + "NP_416362.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY9" + ], + [ + "gene_synonym", + "b1848" + ], + [ + "gene_synonym", + "yebG" + ] + ], + "dna_sequence": "ATGGCGGTTGAAGTTAAATACGTAGTCATTCGTGAGGGCGAAGAGAAAATGTCGTTTACCAGCAAAAAGGAAGCCGATGCTTATGACAAAATGCTTGATACGGCGGATCTGCTTGACACCTGGCTGACAAATTCTCCAGTGCAAATGGAAGACGAGCAACGTGAAGCCCTTTCGCTATGGCTGGCAGAACAAAAAGATGTGCTGAGCACCATTCTGAAAACCGGCAAATTACCGTCCCCACAGGTCGTCGGTGCTGAATCCGAAGAGGAAGATGCCTCACACGCGGCCTGA", + "dna_sequence_length": 291, + "functions": [ + "DNA damage-inducible protein regulated by LexA" + ], + "id": "CDS_1840", + "location": [ + [ + "NC_000913", + 1930747, + "-", + 291 + ] + ], + "md5": "a8e5d34f38e0db55b16ca6e89f4771fe", + "parent_gene": "", + "protein_md5": "c1e3d41d2a392cbbdca3ca1af6cf7f7d", + "protein_translation": "MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006162" + ], + [ + "gene_synonym", + "ECK1850" + ], + [ + "gene_synonym", + "EcoGene:EG11809" + ], + [ + "gene_synonym", + "GI:16129802" + ], + [ + "gene_synonym", + "GeneID:946368" + ], + [ + "gene_synonym", + "JW1838" + ], + [ + "gene_synonym", + "NP_416363.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33221" + ], + [ + "gene_synonym", + "b1849" + ], + [ + "gene_synonym", + "purT" + ] + ], + "dna_sequence": "ATGACGTTATTAGGCACTGCGCTGCGTCCGGCAGCAACTCGCGTGATGTTATTAGGCTCCGGTGAACTGGGTAAAGAAGTGGCAATCGAGTGTCAGCGTCTCGGCGTAGAGGTGATTGCCGTCGATCGCTATGCCGACGCACCAGCCATGCATGTCGCGCATCGCTCCCATGTCATTAATATGCTTGATGGTGATGCATTACGCCGTGTGGTTGAACTGGAAAAACCACATTATATCGTGCCGGAGATCGAAGCTATTGCCACCGATATGCTGATCCAACTTGAAGAGGAAGGACTGAATGTTGTCCCCTGCGCTCGCGCAACGAAATTAACGATGAATCGCGAGGGTATCCGTCGCCTGGCGGCAGAAGAGCTGCAGCTGCCCACTTCCACTTATCGTTTTGCCGATAGCGAAAGCCTTTTCCGCGAGGCGGTTGCTGACATTGGCTATCCCTGCATTGTAAAACCGGTGATGAGCTCTTCCGGCAAGGGGCAGACGTTTATTCGTTCTGCAGAGCAACTTGCTCAGGCATGGAAGTACGCTCAGCAAGGCGGTCGCGCCGGAGCGGGCCGCGTAATTGTTGAAGGCGTCGTTAAGTTTGACTTCGAAATTACCCTGCTAACCGTCAGCGCGGTGGATGGCGTCCATTTCTGTGCACCAGTAGGTCATCGCCAGGAAGATGGCGACTACCGTGAATCCTGGCAACCACAGCAAATGAGCCCGCTTGCCCTTGAACGTGCGCAGGAGATTGCCCGTAAAGTGGTGCTGGCACTGGGCGGTTATGGGTTGTTTGGTGTCGAGCTATTTGTCTGTGGTGATGAGGTGATTTTCAGTGAGGTCTCCCCTCGTCCACATGATACCGGGATGGTGACGTTAATTTCTCAAGATCTCTCAGAGTTTGCCCTGCATGTACGTGCCTTCCTCGGACTTCCGGTTGGCGGGATCCGTCAGTATGGTCCTGCAGCTTCTGCCGTTATTCTGCCACAACTGACCAGTCAGAATGTCACGTTTGATAATGTGCAGAATGCCGTAGGCGCAGATTTGCAGATTCGTTTATTTGGTAAGCCGGAAATTGATGGCAGCCGTCGTCTGGGGGTGGCACTGGCTACTGCAGAGAGTGTTGTTGACGCCATTGAACGCGCGAAGCACGCCGCCGGACAGGTAAAAGTACAGGGTTAA", + "dna_sequence_length": 1179, + "functions": [ + "phosphoribosylglycinamide formyltransferase 2" + ], + "id": "CDS_1841", + "location": [ + [ + "NC_000913", + 1930881, + "+", + 1179 + ] + ], + "md5": "54922a51519262ac5be18e7dc95d2923", + "parent_gene": "", + "protein_md5": "09fed575be2fb9c0d6f3109a95be5f86", + "protein_translation": "MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006164" + ], + [ + "gene_synonym", + "ECK1851" + ], + [ + "gene_synonym", + "EcoGene:EG10256" + ], + [ + "gene_synonym", + "GI:16129803" + ], + [ + "gene_synonym", + "GeneID:946367" + ], + [ + "gene_synonym", + "JW1839" + ], + [ + "gene_synonym", + "NP_416364.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A955" + ], + [ + "gene_synonym", + "b1850" + ], + [ + "gene_synonym", + "eda" + ], + [ + "gene_synonym", + "hga" + ], + [ + "gene_synonym", + "kdgA" + ], + [ + "gene_synonym", + "kga" + ] + ], + "dna_sequence": "ATGAAAAACTGGAAAACAAGTGCAGAATCAATCCTGACCACCGGCCCGGTTGTACCGGTTATCGTGGTAAAAAAACTGGAACACGCGGTGCCGATGGCAAAAGCGTTGGTTGCTGGTGGGGTGCGCGTTCTGGAAGTGACTCTGCGTACCGAGTGTGCAGTTGACGCTATCCGTGCTATCGCCAAAGAAGTGCCTGAAGCGATTGTGGGTGCCGGTACGGTGCTGAATCCACAGCAGCTGGCAGAAGTCACTGAAGCGGGTGCACAGTTCGCAATTAGCCCGGGTCTGACCGAGCCGCTGCTGAAAGCTGCTACCGAAGGGACTATTCCTCTGATTCCGGGGATCAGCACTGTTTCCGAACTGATGCTGGGTATGGACTACGGTTTGAAAGAGTTCAAATTCTTCCCGGCTGAAGCTAACGGCGGCGTGAAAGCCCTGCAGGCGATCGCGGGTCCGTTCTCCCAGGTCCGTTTCTGCCCGACGGGTGGTATTTCTCCGGCTAACTACCGTGACTACCTGGCGCTGAAAAGCGTGCTGTGCATCGGTGGTTCCTGGCTGGTTCCGGCAGATGCGCTGGAAGCGGGCGATTACGACCGCATTACTAAGCTGGCGCGTGAAGCTGTAGAAGGCGCTAAGCTGTAA", + "dna_sequence_length": 642, + "functions": [ + "KHG/KDPG aldolase", + "2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase" + ], + "id": "CDS_1842", + "location": [ + [ + "NC_000913", + 1932756, + "-", + 642 + ] + ], + "md5": "5bc8f2ceafd12b49db27d15ac5177de7", + "parent_gene": "", + "protein_md5": "b314da7703a0f4533abc0e706147208f", + "protein_translation": "MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006166" + ], + [ + "gene_synonym", + "ECK1852" + ], + [ + "gene_synonym", + "EcoGene:EG10257" + ], + [ + "gene_synonym", + "GI:16129804" + ], + [ + "gene_synonym", + "GeneID:946362" + ], + [ + "gene_synonym", + "JW1840" + ], + [ + "gene_synonym", + "NP_416365.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADF6" + ], + [ + "gene_synonym", + "b1851" + ], + [ + "gene_synonym", + "edd" + ] + ], + "dna_sequence": "ATGAATCCACAATTGTTACGCGTAACAAATCGAATCATTGAACGTTCGCGCGAGACTCGCTCTGCTTATCTCGCCCGGATAGAACAAGCGAAAACTTCGACCGTTCATCGTTCGCAGTTGGCATGCGGTAACCTGGCACACGGTTTCGCTGCCTGCCAGCCAGAAGACAAAGCCTCTTTGAAAAGCATGTTGCGTAACAATATCGCCATCATCACCTCCTATAACGACATGCTCTCCGCGCACCAGCCTTATGAACACTATCCAGAAATCATTCGTAAAGCCCTGCATGAAGCGAATGCGGTTGGTCAGGTTGCGGGCGGTGTTCCGGCGATGTGTGATGGTGTCACCCAGGGGCAGGATGGAATGGAATTGTCGCTGCTAAGCCGCGAAGTGATAGCGATGTCTGCGGCGGTGGGGCTGTCCCATAACATGTTTGATGGTGCTCTGTTCCTCGGTGTGTGCGACAAGATTGTCCCGGGTCTGACGATGGCAGCCCTGTCGTTTGGTCATTTGCCTGCGGTGTTTGTGCCGTCTGGACCGATGGCAAGCGGTTTGCCAAATAAAGAAAAAGTGCGTATTCGCCAGCTTTATGCCGAAGGTAAAGTGGACCGCATGGCCTTACTGGAGTCAGAAGCCGCGTCTTACCATGCGCCGGGAACATGTACTTTCTACGGTACTGCCAACACCAACCAGATGGTGGTGGAGTTTATGGGGATGCAGTTGCCAGGCTCTTCTTTTGTTCATCCGGATTCTCCGCTGCGCGATGCTTTGACCGCCGCAGCTGCGCGTCAGGTTACACGCATGACCGGTAATGGTAATGAATGGATGCCGATCGGTAAGATGATCGATGAGAAAGTGGTGGTGAACGGTATCGTTGCACTGCTGGCGACCGGTGGTTCCACTAACCACACCATGCACCTGGTGGCGATGGCGCGCGCGGCCGGTATTCAGATTAACTGGGATGACTTCTCTGACCTTTCTGATGTTGTACCGCTGATGGCACGTCTCTACCCGAACGGTCCGGCCGATATTAACCACTTCCAGGCGGCAGGTGGCGTACCGGTTCTGGTGCGTGAACTGCTCAAAGCAGGCCTGCTGCATGAAGATGTCAATACGGTGGCAGGTTTTGGTCTGTCTCGTTATACCCTTGAACCATGGCTGAATAATGGTGAACTGGACTGGCGGGAAGGGGCGGAAAAATCACTCGACAGCAATGTGATCGCTTCCTTCGAACAACCTTTCTCTCATCATGGTGGGACAAAAGTGTTAAGCGGTAACCTGGGCCGTGCGGTTATGAAAACCTCTGCCGTGCCGGTTGAGAACCAGGTGATTGAAGCGCCAGCGGTTGTTTTTGAAAGCCAGCATGACGTTATGCCGGCCTTTGAAGCGGGTTTGCTGGACCGCGATTGTGTCGTTGTTGTCCGTCATCAGGGGCCAAAAGCGAACGGAATGCCAGAATTACATAAACTCATGCCGCCACTTGGTGTATTATTGGACCGGTGTTTCAAAATTGCGTTAGTTACCGATGGACGACTCTCCGGCGCTTCAGGTAAAGTGCCGTCAGCTATCCACGTAACACCAGAAGCCTACGATGGCGGGCTGCTGGCAAAAGTGCGCGACGGGGACATCATTCGTGTGAATGGACAGACAGGCGAACTGACGCTGCTGGTAGACGAAGCGGAACTGGCTGCTCGCGAACCGCACATTCCTGACCTGAGCGCGTCACGCGTGGGAACAGGACGTGAATTATTCAGCGCCTTGCGTGAAAAACTGTCCGGTGCCGAACAGGGCGCAACCTGTATCACTTTTTAA", + "dna_sequence_length": 1812, + "functions": [ + "6-phosphogluconate dehydratase" + ], + "id": "CDS_1843", + "location": [ + [ + "NC_000913", + 1934604, + "-", + 1812 + ] + ], + "md5": "5613313732a148185afef01b46895afe", + "parent_gene": "", + "protein_md5": "371e11c9eb13cc1cb3010a66a98c6e68", + "protein_translation": "MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF", + "protein_translation_length": 603, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006171" + ], + [ + "gene_synonym", + "ECK1853" + ], + [ + "gene_synonym", + "EcoGene:EG11221" + ], + [ + "gene_synonym", + "GI:16129805" + ], + [ + "gene_synonym", + "GeneID:946370" + ], + [ + "gene_synonym", + "JW1841" + ], + [ + "gene_synonym", + "NP_416366.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC53" + ], + [ + "gene_synonym", + "b1852" + ], + [ + "gene_synonym", + "zwf" + ] + ], + "dna_sequence": "ATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCATTTTCGGCGCGAAAGGCGACCTTGCGCGTCGTAAATTGCTGCCTTCCCTGTATCAACTGGAAAAAGCCGGTCAGCTCAACCCGGACACCCGGATTATCGGCGTAGGGCGTGCTGACTGGGATAAAGCGGCATATACCAAAGTTGTCCGCGAGGCGCTCGAAACTTTCATGAAAGAAACCATTGATGAAGGTTTATGGGACACCCTGAGTGCACGTCTGGATTTTTGTAATCTCGATGTCAATGACACTGCTGCATTCAGCCGTCTCGGCGCGATGCTGGATCAAAAAAATCGTATCACCATTAACTACTTTGCCATGCCGCCCAGCACTTTTGGCGCAATTTGCAAAGGGCTTGGCGAGGCAAAACTGAATGCTAAACCGGCACGCGTAGTCATGGAGAAACCGCTGGGGACGTCGCTGGCGACCTCGCAGGAAATCAATGATCAGGTTGGCGAATACTTCGAGGAGTGCCAGGTTTACCGTATCGACCACTATCTTGGTAAAGAAACGGTGCTGAACCTGTTGGCGCTGCGTTTTGCTAACTCCCTGTTTGTGAATAACTGGGACAATCGCACCATTGATCATGTTGAGATTACCGTGGCAGAAGAAGTGGGGATCGAAGGGCGCTGGGGCTATTTTGATAAAGCCGGTCAGATGCGCGACATGATCCAGAACCACCTGCTGCAAATTCTTTGCATGATTGCGATGTCTCCGCCGTCTGACCTGAGCGCAGACAGCATCCGCGATGAAAAAGTGAAAGTACTGAAGTCTCTGCGCCGCATCGACCGCTCCAACGTACGCGAAAAAACCGTACGCGGGCAATATACTGCGGGCTTCGCCCAGGGCAAAAAAGTGCCGGGATATCTGGAAGAAGAGGGCGCGAACAAGAGCAGCAATACAGAAACTTTCGTGGCGATCCGCGTCGACATTGATAACTGGCGCTGGGCCGGTGTGCCATTCTACCTGCGTACTGGTAAACGTCTGCCGACCAAATGTTCTGAAGTCGTGGTCTATTTCAAAACACCTGAACTGAATCTGTTTAAAGAATCGTGGCAGGATCTGCCGCAGAATAAACTGACTATCCGTCTGCAACCTGATGAAGGCGTGGATATCCAGGTACTGAATAAAGTTCCTGGCCTTGACCACAAACATAACCTGCAAATCACCAAGCTGGATCTGAGCTATTCAGAAACCTTTAATCAGACGCATCTGGCGGATGCCTATGAACGTTTGCTGCTGGAAACCATGCGTGGTATTCAGGCACTGTTTGTACGTCGCGACGAAGTGGAAGAAGCCTGGAAATGGGTAGACTCCATTACTGAGGCGTGGGCGATGGACAATGATGCGCCGAAACCGTATCAGGCCGGAACCTGGGGACCCGTTGCCTCGGTGGCGATGATTACCCGTGATGGTCGTTCCTGGAATGAGTTTGAGTAA", + "dna_sequence_length": 1476, + "functions": [ + "glucose-6-phosphate 1-dehydrogenase" + ], + "id": "CDS_1844", + "location": [ + [ + "NC_000913", + 1936314, + "-", + 1476 + ] + ], + "md5": "9b030eb08d8cc63b819d801d105e9c43", + "parent_gene": "", + "protein_md5": "2adc85c04e205bb322f6838caacfc474", + "protein_translation": "MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006179" + ], + [ + "gene_synonym", + "ECK1854" + ], + [ + "gene_synonym", + "EcoGene:EG12860" + ], + [ + "gene_synonym", + "GI:16129806" + ], + [ + "gene_synonym", + "GeneID:946373" + ], + [ + "gene_synonym", + "JW1842" + ], + [ + "gene_synonym", + "NP_416367.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46118" + ], + [ + "gene_synonym", + "b1853" + ], + [ + "gene_synonym", + "hexR" + ], + [ + "gene_synonym", + "yebK" + ] + ], + "dna_sequence": "ATGAATATGCTGGAAAAAATCCAGTCTCAGCTGGAACATTTGAGCAAATCAGAGCGCAAAGTTGCCGAGGTCATTCTGGCTTCGCCCGATAACGCGATCCATTCGAGTATTGCTGCTATGGCACTGGAAGCCAATGTTAGCGAACCGACGGTGAATCGTTTCTGTCGCAGCATGGACACGCGCGGTTTTCCTGATTTTAAACTTCATCTGGCACAGAGTCTGGCGAATGGCACTCCCTATGTTAATCGCAATGTCAATGAAGATGACAGCGTTGAATCATACACAGGGAAAATATTTGAGTCCGCAATGGCAACGCTTGATCATGTCCGTCATTCACTGGATAAATCTGCCATCAACCGCGCCGTCGACTTGCTCACTCAGGCAAAAAAAATCGCCTTTTTCGGATTAGGCTCTTCAGCCGCCGTTGCCCACGATGCGATGAATAAGTTCTTTCGTTTTAATGTTCCGGTGGTGTACTCCGATGATATCGTGCTGCAACGCATGAGTTGTATGAATTGTAGCGACGGAGACGTGGTGGTGCTGATTTCTCACACTGGAAGAACAAAAAATCTGGTCGAGCTGGCGCAGCTGGCACGCGAAAACGACGCCATGGTGATTGCCCTCACCTCTGCGGGTACCCCGCTCGCCCGGGAAGCAACGCTGGCAATTACCCTCGACGTACCGGAAGATACTGACATTTATATGCCCATGGTTTCTCGACTTGCACAGCTGACCGTGATAGATGTGCTGGCGACAGGATTTACTTTGCGACGCGGTGCAAAATTCAGAGATAACTTGAAGCGGGTCAAAGAAGCGCTGAAGGAATCGCGTTTTGATAAGCAGTTACTTAATTTAAGTGACGATCGCTAA", + "dna_sequence_length": 870, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_1845", + "location": [ + [ + "NC_000913", + 1936652, + "+", + 870 + ] + ], + "md5": "648469b6f1d8b261b0c63faaeb60743d", + "parent_gene": "", + "protein_md5": "778f496903bce38763ee161e70354b1c", + "protein_translation": "MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006182" + ], + [ + "gene_synonym", + "ECK1855" + ], + [ + "gene_synonym", + "EcoGene:EG10803" + ], + [ + "gene_synonym", + "GI:16129807" + ], + [ + "gene_synonym", + "GeneID:946527" + ], + [ + "gene_synonym", + "JW1843" + ], + [ + "gene_synonym", + "NP_416368.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21599" + ], + [ + "gene_synonym", + "b1854" + ], + [ + "gene_synonym", + "pykA" + ] + ], + "dna_sequence": "ATGTCCAGAAGGCTTCGCAGAACAAAAATCGTTACCACGTTAGGCCCAGCAACAGATCGCGATAATAATCTTGAAAAAGTTATCGCGGCGGGTGCCAACGTTGTACGTATGAACTTTTCTCACGGCTCGCCTGAAGATCACAAAATGCGCGCGGATAAAGTTCGTGAGATTGCCGCAAAACTGGGGCGTCATGTGGCTATTCTGGGTGACCTCCAGGGGCCCAAAATCCGTGTATCCACCTTTAAAGAAGGCAAAGTTTTCCTCAATATTGGGGATAAATTCCTGCTCGACGCCAACCTGGGTAAAGGTGAAGGCGACAAAGAAAAAGTCGGTATCGACTACAAAGGCCTGCCTGCTGACGTCGTGCCTGGTGACATCCTGCTGCTGGACGATGGTCGCGTCCAGTTAAAAGTACTGGAAGTTCAGGGCATGAAAGTGTTCACCGAAGTCACCGTCGGTGGTCCCCTCTCCAACAATAAAGGTATCAACAAACTTGGCGGCGGTTTGTCGGCTGAAGCGCTGACCGAAAAAGACAAAGCAGACATTAAGACTGCGGCGTTGATTGGCGTAGATTACCTGGCTGTCTCCTTCCCACGCTGTGGCGAAGATCTGAACTATGCCCGTCGCCTGGCACGCGATGCAGGATGTGATGCGAAAATTGTTGCCAAGGTTGAACGTGCGGAAGCCGTTTGCAGCCAGGATGCAATGGATGACATCATCCTCGCCTCTGACGTGGTAATGGTTGCACGTGGCGACCTCGGTGTGGAAATTGGCGACCCGGAACTGGTCGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGCGACCCAGATGATGGAGTCAATGATTACTAACCCGATGCCGACGCGTGCAGAAGTCATGGACGTAGCAAACGCCGTTCTGGATGGTACTGACGCTGTGATGCTGTCTGCAGAAACTGCCGCTGGGCAGTATCCGTCAGAAACCGTTGCAGCCATGGCGCGCGTTTGCCTGGGTGCGGAAAAAATCCCGAGCATCAACGTTTCTAAACACCGTCTGGACGTTCAGTTCGACAATGTGGAAGAAGCTATTGCCATGTCAGCAATGTACGCAGCTAACCACCTGAAAGGCGTTACGGCGATCATCACCATGACCGAATCGGGTCGTACCGCGCTGATGACCTCCCGTATCAGCTCTGGTCTGCCAATTTTCGCCATGTCGCGCCATGAACGTACGCTGAACCTGACTGCTCTCTATCGTGGCGTTACGCCGGTGCACTTTGATAGCGCTAATGACGGCGTAGCAGCTGCCAGCGAAGCGGTTAATCTGCTGCGCGATAAAGGTTACTTGATGTCTGGTGACCTGGTGATTGTCACCCAGGGCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAA", + "dna_sequence_length": 1443, + "functions": [ + "pyruvate kinase II" + ], + "id": "CDS_1846", + "location": [ + [ + "NC_000913", + 1937649, + "+", + 1443 + ] + ], + "md5": "1a1e806751eb4d036df504c0505afeb3", + "parent_gene": "", + "protein_md5": "a48ece5c8d4b724f879abaeaa387af9f", + "protein_translation": "MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE", + "protein_translation_length": 480, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006185" + ], + [ + "gene_synonym", + "ECK1856" + ], + [ + "gene_synonym", + "EcoGene:EG10614" + ], + [ + "gene_synonym", + "GI:16129808" + ], + [ + "gene_synonym", + "GeneID:945143" + ], + [ + "gene_synonym", + "JW1844" + ], + [ + "gene_synonym", + "NP_416369.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24205" + ], + [ + "gene_synonym", + "b1855" + ], + [ + "gene_synonym", + "lpxM" + ], + [ + "gene_synonym", + "mlt" + ], + [ + "gene_synonym", + "msbB" + ], + [ + "gene_synonym", + "waaN" + ] + ], + "dna_sequence": "ATGGAAACGAAAAAAAATAATAGCGAATACATTCCTGAGTTTGATAAATCCTTTCGCCACCCGCGCTACTGGGGAGCATGGCTGGGCGTAGCAGCGATGGCGGGTATCGCTTTAACGCCGCCAAAGTTCCGTGATCCCATTCTGGCACGGCTGGGACGTTTTGCCGGACGACTGGGAAAAAGCTCACGCCGTCGTGCGTTAATCAATCTGTCGCTCTGCTTTCCAGAACGTAGTGAAGCTGAACGCGAAGCGATTGTTGATGAGATGTTTGCCACCGCGCCGCAAGCGATGGCAATGATGGCTGAGTTGGCAATACGCGGGCCGGAGAAAATTCAGCCGCGCGTTGACTGGCAAGGGCTGGAGATCATCGAAGAGATGCGGCGTAATAACGAGAAAGTTATCTTTCTGGTGCCGCACGGTTGGGCCGTCGATATTCCTGCCATGCTGATGGCCTCGCAAGGGCAGAAAATGGCAGCGATGTTCCATAATCAGGGCAACCCGGTTTTTGATTATGTCTGGAACACGGTGCGTCGTCGCTTTGGCGGTCGTCTGCATGCGAGAAATGACGGTATTAAACCATTCATCCAGTCGGTACGTCAGGGGTACTGGGGATATTATTTACCCGATCAGGATCATGGCCCAGAGCACAGCGAATTTGTGGATTTCTTTGCCACCTATAAAGCGACGTTGCCCGCGATTGGTCGTTTGATGAAAGTGTGCCGTGCGCGCGTTGTACCGCTGTTTCCGATTTATGATGGCAAGACGCATCGTCTGACGATTCAGGTGCGCCCACCGATGGATGATCTGTTAGAGGCGGATGATCATACGATTGCGCGGCGGATGAATGAAGAAGTCGAGATTTTTGTTGGTCCGCGACCAGAACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGCCGTATAAGCGCAAAGATCTTTATCCCATCAAATAA", + "dna_sequence_length": 972, + "functions": [ + "myristoyl-acyl carrier protein (ACP)-dependent acyltransferase" + ], + "id": "CDS_1847", + "location": [ + [ + "NC_000913", + 1940193, + "-", + 972 + ] + ], + "md5": "13806d9f4abf5c1eb9f68646987c6664", + "parent_gene": "", + "protein_md5": "d6e3783442cec3367f6157de8b1cd3f3", + "protein_translation": "METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006189" + ], + [ + "gene_synonym", + "ECK1857" + ], + [ + "gene_synonym", + "EcoGene:EG10013" + ], + [ + "gene_synonym", + "GI:90111345" + ], + [ + "gene_synonym", + "GeneID:946376" + ], + [ + "gene_synonym", + "JW5304" + ], + [ + "gene_synonym", + "NP_416370.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS9" + ], + [ + "gene_synonym", + "b1856" + ], + [ + "gene_synonym", + "mepM" + ], + [ + "gene_synonym", + "yebA" + ] + ], + "dna_sequence": "GTGCAACAGATAGCCCGCTCTGTCGCCCTGGCGTTTAATAATTTACCGCGACCACACCGCGTTATGTTGGGGTCGCTCACCGTTCTTACTCTGGCCGTCGCTGTCTGGCGGCCTTATGTTTATCACCGTGATGCCACGCCAATTGTCAAAACCATTGAGCTGGAACAGAACGAAATTCGTTCGCTCTTACCTGAAGCCAGTGAGCCGATTGATCAAGCTGCACAAGAAGATGAAGCCATTCCCCAGGACGAACTGGATGACAAAATCGCCGGTGAAGCGGGCGTGCATGAATATGTTGTTTCCACTGGCGATACGCTAAGCAGCATTCTCAATCAGTATGGTATTGATATGGGTGATATCACCCAACTGGCTGCGGCCGACAAAGAATTGCGTAACCTGAAAATCGGTCAACAACTCTCCTGGACATTAACCGCGGACGGCGAACTGCAGCGCCTCACCTGGGAAGTGTCTCGTCGTGAAACCCGAACCTATGACCGTACTGCCGCTAACGGTTTTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTTGTTGCCAGCGCCAGAAACGCCGGTTTAACCAGCGCCGAAGTGAGCGCAGTGATTAAAGCCATGCAGTGGCAAATGGATTTCCGCAAACTGAAAAAAGGCGATGAATTTGCGGTGTTAATGTCTCGAGAAATGCTTGATGGTAAACGTGAGCAAAGCCAGCTGCTGGGCGTACGTTTGCGTTCAGAAGGTAAAGATTATTACGCTATCCGCGCTGAAGATGGCAAATTCTACGATCGTAACGGTACTGGTCTGGCGAAAGGATTCTTGCGATTCCCGACGGCGAAACAGTTCCGTATCTCGTCTAATTTTAACCCGCGTCGTACTAATCCGGTGACCGGTCGCGTTGCACCACACAGAGGTGTTGATTTCGCCATGCCGCAGGGTACGCCAGTGCTTTCAGTGGGTGACGGTGAAGTGGTGGTTGCCAAACGCAGTGGCGCAGCAGGTTATTATGTGGCTATTCGTCATGGTCGCAGCTACACCACGCGTTATATGCACTTGCGCAAGATTCTGGTGAAACCGGGACAGAAGGTGAAACGTGGCGACCGTATCGCGCTTTCCGGTAATACCGGACGTTCAACCGGGCCGCATCTGCACTATGAAGTATGGATAAACCAGCAGGCCGTAAACCCGCTGACGGCAAAACTGCCGCGTACCGAAGGGCTGACCGGCTCCGATCGTCGCGAATTCCTGGCGCAGGCCAAAGAGATTGTGCCGCAGCTACGGTTTGATTAA", + "dna_sequence_length": 1323, + "functions": [ + "murein DD-endopeptidase, space-maker hydrolase, septation protein" + ], + "id": "CDS_1848", + "location": [ + [ + "NC_000913", + 1941635, + "-", + 1323 + ] + ], + "md5": "a122b8553637f47fde8577090b70d67c", + "parent_gene": "", + "protein_md5": "363f2f7e2e2ab5780ac7ea92926175b8", + "protein_translation": "MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRDATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVSTGDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRETRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQWQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRNGTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGEVVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006191" + ], + [ + "gene_synonym", + "ECK1858" + ], + [ + "gene_synonym", + "EcoGene:EG12678" + ], + [ + "gene_synonym", + "GI:90111346" + ], + [ + "gene_synonym", + "GeneID:946375" + ], + [ + "gene_synonym", + "JW5831" + ], + [ + "gene_synonym", + "NP_416371.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39172" + ], + [ + "gene_synonym", + "b1857" + ], + [ + "gene_synonym", + "yebL" + ], + [ + "gene_synonym", + "yzzP" + ], + [ + "gene_synonym", + "znuA" + ] + ], + "dna_sequence": "ATGTTACATAAAAAAACGCTTCTTTTCGCAGCATTATCCGCCGCTCTCTGGGGAGGTGCAACACAGGCCGCAGATGCCGCCGTTGTCGCTTCGCTTAAACCCGTTGGGTTCATCGCTTCTGCCATTGCTGATGGGGTAACAGAAACAGAGGTTTTACTTCCTGACGGCGCTTCAGAACATGATTATTCACTGCGCCCATCGGATGTAAAACGCTTACAGAACGCGGACTTAGTCGTTTGGGTTGGCCCGGAGATGGAAGCGTTTATGCAAAAACCGGTAAGCAAATTACCAGGAGCGAAGCAGGTAACGATTGCGCAGCTTGAAGATGTGAAACCGCTACTGATGAAAAGTATTCACGGCGATGATGATGATCACGACCACGCGGAAAAAAGTGACGAAGATCACCATCACGGCGATTTCAACATGCATCTTTGGCTTTCCCCAGAGATAGCGCGGGCTACAGCGGTTGCAATCCATGGAAAATTAGTGGAACTTATGCCGCAAAGTCGAGCCAAACTTGACGCCAACCTGAAGGATTTTGAGGCACAATTAGCCTCAACCGAAACGCAGGTTGGTAACGAGCTCGCGCCGCTCAAGGGGAAAGGTTATTTCGTTTTTCACGATGCTTACGGCTATTTCGAAAAACAGTTTGGACTGACACCGCTTGGTCATTTTACCGTTAACCCTGAGATTCAACCTGGCGCGCAGCGTTTACATGAAATAAGAACACAGTTGGTTGAGCAAAAAGCAACCTGCGTTTTTGCTGAGCCACAGTTCAGGCCAGCGGTCGTTGAGAGCGTCGCACGAGGGACATCCGTTCGTATGGGAACGTTGGATCCCCTGGGGACGAATATCAAACTGGGTAAAACAAGCTATTCAGAATTCCTGAGTCAATTAGCCAACCAGTATGCGAGCTGCCTGAAAGGAGATTAA", + "dna_sequence_length": 933, + "functions": [ + "zinc ABC transporter periplasmic binding protein" + ], + "id": "CDS_1849", + "location": [ + [ + "NC_000913", + 1942583, + "-", + 933 + ] + ], + "md5": "b1ce9eef0b952f75b7db82e226b754e0", + "parent_gene": "", + "protein_md5": "0eb68fb20fe9ce365ac15a74498d040a", + "protein_translation": "MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006198" + ], + [ + "gene_synonym", + "ECK1859" + ], + [ + "gene_synonym", + "EcoGene:EG13132" + ], + [ + "gene_synonym", + "GI:16129811" + ], + [ + "gene_synonym", + "GeneID:946374" + ], + [ + "gene_synonym", + "JW1847" + ], + [ + "gene_synonym", + "NP_416372.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9X1" + ], + [ + "gene_synonym", + "b1858" + ], + [ + "gene_synonym", + "yebM" + ], + [ + "gene_synonym", + "znuC" + ] + ], + "dna_sequence": "ATGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAACGCAGCGTGTACTATTAGCGCGAGCATTGTTAAATCGCCCGCAATTATTAGTGCTGGATGAACCCACTCAAGGCGTGGATGTAAATGGCCAGGTGGCGTTATATGACCTTATTGACCAACTGCGTCGTGAACTGGATTGTGGCGTTTTAATGGTTTCTCACGATCTGCATCTGGTGATGGCAAAAACCGATGAAGTGCTGTGCCTGAATCACCACATTTGTTGTTCCGGCACACCGGAAGTTGTTTCCCTGCATCCGGAGTTTATTTCAATGTTTGGTCCTCGTGGTGCTGAACAACTGGGTATCTATCGCCATCATCATAACCATCGTCACGATTTACAGGGACGAATTGTTTTGCGTCGGGGAAATGATCGCTCATGA", + "dna_sequence_length": 756, + "functions": [ + "zinc ABC transporter ATPase" + ], + "id": "CDS_1850", + "location": [ + [ + "NC_000913", + 1942662, + "+", + 756 + ] + ], + "md5": "a53491707cd4e18b88715094d7a0798c", + "parent_gene": "", + "protein_md5": "5e314b5dec9369d3b0ed876ad0e66ed4", + "protein_translation": "MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFGPRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006201" + ], + [ + "gene_synonym", + "ECK1860" + ], + [ + "gene_synonym", + "EcoGene:EG12368" + ], + [ + "gene_synonym", + "GI:16129812" + ], + [ + "gene_synonym", + "GeneID:946372" + ], + [ + "gene_synonym", + "JW1848" + ], + [ + "gene_synonym", + "NP_416373.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39832" + ], + [ + "gene_synonym", + "b1859" + ], + [ + "gene_synonym", + "yebI" + ], + [ + "gene_synonym", + "znuB" + ] + ], + "dna_sequence": "ATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGATAAGCCCGGATCTGGCGTTTGTTGATGGTGTGAAATTACAGCGAGTGAAATTGTTGTTGATGCTGGTGACGGCATTGACGATTGGTGTAGCGATGAAATTTGTCGGTGCGTTGATTATTACTTCGTTGCTGATTATTCCTGCTGCTACTGCGCGTCGCTTTGCCCGCACGCCGGAACAGATGGCTGGTGTCGCTGTTTTGGTGGGGATGGTGGCAGTGACTGGCGGTTTAACCTTTTCCGCGGTTTACGATACGCCGGCGGGTCCGTCGGTGGTGCTATGTGCGGCACTGTTATTTATTCTCAGTATGATGAAAAAGCAGGCCAGCTAA", + "dna_sequence_length": 786, + "functions": [ + "zinc ABC transporter permease" + ], + "id": "CDS_1851", + "location": [ + [ + "NC_000913", + 1943414, + "+", + 786 + ] + ], + "md5": "59234b461d7d06383dd550acfacc5c1b", + "parent_gene": "", + "protein_md5": "9a5824f523e2de95b325027f33b9ef77", + "protein_translation": "MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAVYDTPAGPSVVLCAALLFILSMMKKQAS", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006204" + ], + [ + "gene_synonym", + "ECK1861" + ], + [ + "gene_synonym", + "EcoGene:EG10924" + ], + [ + "gene_synonym", + "GI:16129813" + ], + [ + "gene_synonym", + "GeneID:946371" + ], + [ + "gene_synonym", + "JW1849" + ], + [ + "gene_synonym", + "NP_416374.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A812" + ], + [ + "gene_synonym", + "b1860" + ], + [ + "gene_synonym", + "ruvB" + ] + ], + "dna_sequence": "ATGATTGAAGCAGACCGTCTGATTTCTGCCGGTACCACTTTGCCGGAAGATGTAGCAGATCGCGCCATTCGCCCCAAATTACTGGAAGAGTATGTTGGTCAGCCGCAGGTTCGTTCACAGATGGAGATTTTCATCAAAGCAGCGAAACTGCGCGGCGATGCCCTCGATCATTTGTTGATTTTTGGTCCTCCGGGGTTGGGTAAAACTACGCTTGCCAACATTGTCGCCAATGAAATGGGCGTTAATTTACGCACGACTTCTGGTCCGGTGCTGGAAAAGGCGGGCGATTTGGCTGCGATGCTCACTAACCTTGAACCGCATGACGTGCTGTTTATTGATGAGATCCACCGTCTATCGCCAGTTGTTGAAGAAGTGCTGTACCCGGCAATGGAAGACTACCAACTGGATATCATGATTGGTGAAGGTCCGGCGGCACGCTCCATTAAAATTGATTTGCCGCCGTTTACCCTGATTGGTGCAACCACGCGCGCAGGTTCGCTGACATCACCGTTGCGCGACCGTTTTGGTATTGTGCAACGTCTGGAGTTTTATCAGGTGCCGGATCTGCAATATATCGTCAGTCGCAGCGCACGCTTTATGGGGCTTGAGATGAGTGATGACGGCGCGCTGGAAGTTGCTCGTCGCGCTCGCGGTACGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTGATTTCGCCGAAGTGAAGCACGATGGCACCATCTCGGCAGATATCGCTGCTCAGGCGCTGGATATGTTGAATGTCGATGCTGAAGGTTTCGATTATATGGACCGCAAATTGTTGCTGGCGGTAATCGATAAGTTCTTTGGTGGACCTGTAGGTCTGGATAACCTGGCGGCAGCCATTGGCGAAGAACGTGAAACCATTGAGGATGTGCTGGAACCTTATTTGATTCAGCAAGGCTTTTTGCAGCGTACACCGCGTGGGCGTATGGCGACGACGCGGGCGTGGAATCACTTTGGCATAACGCCGCCAGAAATGCCGTAA", + "dna_sequence_length": 1011, + "functions": [ + "ATP-dependent DNA helicase, component of RuvABC resolvasome" + ], + "id": "CDS_1852", + "location": [ + [ + "NC_000913", + 1945356, + "-", + 1011 + ] + ], + "md5": "ef154176ea05473bd2d0865df684c1ee", + "parent_gene": "", + "protein_md5": "b9e5f42886aa37d5e491b1818f86e0e6", + "protein_translation": "MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006206" + ], + [ + "gene_synonym", + "ECK1862" + ], + [ + "gene_synonym", + "EcoGene:EG10923" + ], + [ + "gene_synonym", + "GI:16129814" + ], + [ + "gene_synonym", + "GeneID:946369" + ], + [ + "gene_synonym", + "JW1850" + ], + [ + "gene_synonym", + "NP_416375.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A809" + ], + [ + "gene_synonym", + "b1861" + ], + [ + "gene_synonym", + "ruvA" + ] + ], + "dna_sequence": "GTGATAGGCAGACTCAGAGGCATCATCATTGAAAAACAACCCCCGCTGGTGTTAATTGAAGTGGGCGGCGTAGGCTATGAAGTGCATATGCCGATGACCTGTTTTTATGAACTCCCTGAAGCGGGTCAGGAAGCGATCGTTTTCACCCACTTTGTGGTGCGTGAAGACGCGCAACTGCTGTACGGTTTTAACAATAAACAAGAGCGCACATTGTTCAAAGAGTTGATCAAAACCAACGGCGTCGGCCCGAAGTTGGCGCTGGCGATCCTCTCCGGAATGTCAGCGCAGCAGTTCGTTAATGCCGTTGAGCGTGAAGAAGTGGGGGCACTGGTGAAACTGCCGGGTATTGGCAAAAAAACCGCCGAACGCTTGATTGTTGAAATGAAAGACCGATTTAAAGGTTTGCATGGCGATCTCTTTACGCCAGCCGCCGACCTGGTACTCACGTCTCCTGCCAGCCCGGCGACCGACGATGCTGAACAAGAAGCGGTTGCCGCGCTGGTGGCGCTGGGCTATAAACCACAAGAAGCAAGCCGCATGGTGAGCAAAATCGCTCGCCCTGACGCCAGCAGTGAAACTTTAATTCGCGAAGCCCTACGCGCCGCGTTATGA", + "dna_sequence_length": 612, + "functions": [ + "component of RuvABC resolvasome, regulatory subunit" + ], + "id": "CDS_1853", + "location": [ + [ + "NC_000913", + 1945976, + "-", + 612 + ] + ], + "md5": "d15cae6537d6f7da157124f4e0e58f6d", + "parent_gene": "", + "protein_md5": "92baf66389a26f30c4b58b75956d9300", + "protein_translation": "MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4492" + ], + [ + "gene_synonym", + "EcoGene:EG14482" + ], + [ + "gene_synonym", + "GI:226524725" + ], + [ + "gene_synonym", + "GeneID:7751641" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P604" + ], + [ + "gene_synonym", + "YP_002791244.1" + ], + [ + "gene_synonym", + "b4677" + ], + [ + "gene_synonym", + "yobI" + ] + ], + "dna_sequence": "ATGTATATTTTTATTACGCATTTCTTCACTGAATATGTAATATTAAAATATTTGCTTCCAATATAA", + "dna_sequence_length": 66, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1854", + "location": [ + [ + "NC_000913", + 1946180, + "-", + 66 + ] + ], + "md5": "a4569851de53269d4c4fa5db71aedb6f", + "parent_gene": "", + "protein_md5": "caff1fff4072c7ccdf6ef22b10be8b4f", + "protein_translation": "MYIFITHFFTEYVILKYLLPI", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006213" + ], + [ + "gene_synonym", + "ECK1863" + ], + [ + "gene_synonym", + "EcoGene:EG11136" + ], + [ + "gene_synonym", + "GI:90111347" + ], + [ + "gene_synonym", + "GeneID:946377" + ], + [ + "gene_synonym", + "JW5306" + ], + [ + "gene_synonym", + "NP_416376.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24238" + ], + [ + "gene_synonym", + "b1862" + ], + [ + "gene_synonym", + "yebB" + ] + ], + "dna_sequence": "GTGAATATTAATTACCCTGCTGAATATGAAATTGGAGATATCGTCTTTACATGTATAGGTGCTGCCTTATTTGGTCAAATATCAGCTGCATCAAATTGCTGGAGTAATCACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAA", + "dna_sequence_length": 603, + "functions": [ + "DUF830 family protein" + ], + "id": "CDS_1855", + "location": [ + [ + "NC_000913", + 1946251, + "+", + 603 + ] + ], + "md5": "2b8717f91d2f43b7c6fb3199a0a9b56c", + "parent_gene": "", + "protein_md5": "75d5ea232bf9f203fd54bb211467c622", + "protein_translation": "MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006215" + ], + [ + "gene_synonym", + "ECK1864" + ], + [ + "gene_synonym", + "EcoGene:EG10925" + ], + [ + "gene_synonym", + "GI:16129816" + ], + [ + "gene_synonym", + "GeneID:946378" + ], + [ + "gene_synonym", + "JW1852" + ], + [ + "gene_synonym", + "NP_416377.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A814" + ], + [ + "gene_synonym", + "b1863" + ], + [ + "gene_synonym", + "ruvC" + ] + ], + "dna_sequence": "ATGGCTATTATTCTCGGCATTGATCCGGGTTCGCGCGTGACCGGCTACGGCGTCATCCGCCAGGTAGGTAGGCAACTGTCCTACCTGGGTAGCGGATGCATCCGCACCAAAGTGGATGATTTACCGTCTCGTCTGAAACTCATCTATGCGGGCGTGACGGAAATCATCACCCAGTTCCAGCCTGATTATTTCGCCATTGAACAAGTCTTTATGGCAAAGAACGCTGACTCAGCCCTGAAACTGGGCCAGGCGCGCGGCGTGGCGATTGTGGCGGCGGTGAATCAGGAGTTGCCAGTATTTGAATACGCGGCACGTCAGGTAAAGCAAACGGTGGTAGGTATTGGCAGTGCCGAAAAAAGCCAGGTGCAGCATATGGTCCGCACCTTGCTGAAACTGCCCGCTAATCCACAGGCGGATGCCGCCGATGCGCTGGCGATTGCTATCACCCACTGCCACGTTAGTCAGAATGCGATGCAGATGAGCGAATCGCGGCTGAACCTGGCGAGAGGGCGACTGCGTTAA", + "dna_sequence_length": 522, + "functions": [ + "component of RuvABC resolvasome, endonuclease" + ], + "id": "CDS_1856", + "location": [ + [ + "NC_000913", + 1947376, + "-", + 522 + ] + ], + "md5": "52d2b274eceb636064e865921005450d", + "parent_gene": "", + "protein_md5": "539598d2fa64fa2ffaa2e499b33e63ab", + "protein_translation": "MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006219" + ], + [ + "gene_synonym", + "ECK1865" + ], + [ + "gene_synonym", + "EcoGene:EG11137" + ], + [ + "gene_synonym", + "GI:16129817" + ], + [ + "gene_synonym", + "GeneID:946379" + ], + [ + "gene_synonym", + "JW1853" + ], + [ + "gene_synonym", + "NP_416378.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A0" + ], + [ + "gene_synonym", + "b1864" + ], + [ + "gene_synonym", + "yebC" + ] + ], + "dna_sequence": "ATGGCAGGTCATAGTAAATGGGCCAACACCAGACATCGTAAAGCTGCGCAGGATGCTAAGCGCGGTAAAATCTTCACTAAAATCATTCGTGAGCTGGTAACCGCGGCTAAGCTGGGCGGTGGCGATCCGGACGCTAACCCGCGTCTGCGTGCGGCGGTGGATAAAGCACTGTCTAACAACATGACCCGTGACACACTGAACCGCGCAATTGCACGTGGTGTGGGCGGTGATGATGATGCAAACATGGAAACCATCATCTACGAAGGTTACGGTCCTGGCGGCACGGCAATCATGATTGAATGTCTGTCTGACAACCGCAACCGTACCGTTGCTGAAGTGCGTCATGCATTTAGCAAATGTGGCGGTAACCTCGGTACTGATGGTTCCGTTGCCTATCTGTTCAGCAAAAAAGGCGTGATCTCCTTCGAGAAAGGCGATGAAGACACCATCATGGAAGCAGCACTGGAAGCAGGTGCTGAAGACGTTGTGACCTATGATGACGGCGCGATTGATGTCTACACTGCATGGGAAGAAATGGGTAAAGTGCGCGACGCTCTGGAAGCGGCAGGTCTGAAAGCAGACAGCGCGGAAGTTTCCATGATCCCGTCTACCAAAGCTGATATGGATGCAGAAACCGCACCGAAACTGATGCGTCTGATCGATATGCTGGAAGATTGCGACGACGTGCAGGAAGTTTACCATAACGGTGAAATCTCTGATGAGGTCGCAGCGACTCTCTGA", + "dna_sequence_length": 741, + "functions": [ + "UPF0082 family protein" + ], + "id": "CDS_1857", + "location": [ + [ + "NC_000913", + 1948151, + "-", + 741 + ] + ], + "md5": "559efe40cc75ee19abd799b41b7d6482", + "parent_gene": "", + "protein_md5": "fbfddc817c4c3720caa0df1f266bcd50", + "protein_translation": "MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006223" + ], + [ + "gene_synonym", + "ECK1866" + ], + [ + "gene_synonym", + "EcoGene:EG11138" + ], + [ + "gene_synonym", + "GI:16129818" + ], + [ + "gene_synonym", + "GeneID:946383" + ], + [ + "gene_synonym", + "JW1854" + ], + [ + "gene_synonym", + "NP_416379.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFC0" + ], + [ + "gene_synonym", + "b1865" + ], + [ + "gene_synonym", + "ntpA" + ], + [ + "gene_synonym", + "nudB" + ], + [ + "gene_synonym", + "orf17" + ], + [ + "gene_synonym", + "yebD" + ] + ], + "dna_sequence": "GTGAAGGATAAAGTGTATAAGCGTCCCGTTTCGATCTTAGTGGTCATCTACGCACAAGATACGAAACGGGTGCTGATGTTGCAGCGGCGTGACGATCCCGATTTCTGGCAGTCGGTAACCGGCAGCGTGGAAGAGGGTGAAACCGCGCCGCAAGCTGCCATGCGCGAAGTAAAGGAAGAGGTCACCATTGATGTTGTCGCTGAACAACTGACCTTAATTGACTGTCAGCGCACGGTAGAGTTTGAAATTTTTTCACATTTACGTCATCGCTATGCGCCGGGCGTGACGCGTAATACGGAATCATGGTTCTGTCTTGCGCTTCCGCACGAGCGGCAGATCGTTTTCACTGAACATCTGGCTTACAAGTGGCTTGATGCGCCTGCTGCGGCGGCGCTCACTAAGTCCTGGAGCAACCGGCAGGCGATTGAACAGTTTGTAATTAACGCTGCCTGA", + "dna_sequence_length": 453, + "functions": [ + "dihydroneopterin triphosphate pyrophosphatase" + ], + "id": "CDS_1858", + "location": [ + [ + "NC_000913", + 1948632, + "-", + 453 + ] + ], + "md5": "7575692ab65ebfb82b5d6ffdd12717ff", + "parent_gene": "", + "protein_md5": "b570a783ad52ac928a9761c83c08d9ad", + "protein_translation": "MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006226" + ], + [ + "gene_synonym", + "ECK1867" + ], + [ + "gene_synonym", + "EcoGene:EG10097" + ], + [ + "gene_synonym", + "GI:16129819" + ], + [ + "gene_synonym", + "GeneID:946385" + ], + [ + "gene_synonym", + "JW1855" + ], + [ + "gene_synonym", + "NP_416380.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21889" + ], + [ + "gene_synonym", + "aspS" + ], + [ + "gene_synonym", + "b1866" + ], + [ + "gene_synonym", + "tls" + ] + ], + "dna_sequence": "ATGCGTACAGAATATTGTGGACAGCTCCGTTTGTCCCACGTGGGGCAGCAGGTGACTCTGTGTGGTTGGGTCAACCGTCGTCGTGATCTTGGTAGCCTGATCTTCATCGATATGCGCGACCGCGAAGGTATCGTGCAGGTATTTTTCGATCCGGATCGTGCGGACGCGTTAAAGCTGGCCTCTGAACTGCGTAATGAGTTCTGCATTCAGGTCACGGGCACCGTACGTGCGCGTGACGAAAAAAATATTAACCGCGATATGGCGACCGGCGAAATCGAAGTGCTGGCGTCCTCGCTGACTATCATCAACCGCGCAGATGTTCTGCCGCTTGACTCTAACCACGTCAACACCGAAGAAGCGCGTCTGAAATACCGCTACCTCGACCTGCGTCGTCCGGAAATGGCTCAGCGCCTGAAAACCCGCGCTAAAATCACCAGCCTGGTGCGCCGTTTTATGGATGACCACGGCTTCCTCGACATCGAAACTCCGATGCTGACCAAAGCCACGCCGGAAGGCGCGCGTGACTACCTGGTGCCTTCTCGTGTGCACAAAGGTAAATTCTACGCACTGCCGCAATCCCCGCAGTTGTTCAAACAGCTGCTGATGATGTCCGGTTTTGACCGTTACTATCAGATCGTTAAATGCTTCCGTGACGAAGACCTGCGTGCTGACCGTCAGCCTGAATTTACTCAGATCGATGTGGAAACTTCTTTCATGACCGCGCCGCAAGTGCGTGAAGTGATGGAAGCGCTGGTGCGTCATCTGTGGCTGGAAGTGAAGGGTGTGGATCTGGGCGATTTCCCGGTAATGACCTTTGCGGAAGCAGAACGCCGTTATGGTTCTGATAAACCGGATCTGCGTAACCCGATGGAACTGACTGACGTTGCTGATCTGCTGAAATCTGTTGAGTTTGCTGTATTTGCAGGTCCGGCGAACGATCCGAAAGGTCGCGTAGCGGCTCTGCGCGTTCCGGGCGGCGCATCGCTGACCCGTAAGCAGATCGACGAATACGGTAACTTCGTTAAAATCTACGGCGCGAAAGGTCTGGCTTACATCAAAGTTAACGAACGCGCGAAAGGTCTGGAAGGTATCAACAGCCCGGTAGCGAAGTTCCTTAATGCAGAAATCATCGAAGACATCCTGGATCGTACTGCCGCGCAAGATGGCGATATGATTTTCTTCGGTGCCGACAACAAGAAAATTGTTGCCGACGCGATGGGTGCACTGCGCCTGAAAGTGGGTAAAGACCTTGGTCTGACCGACGAAAGCAAATGGGCACCGCTGTGGGTTATCGACTTCCCGATGTTTGAAGACGACGGTGAAGGCGGCCTGACGGCAATGCACCATCCGTTCACCTCACCGAAAGATATGACGGCTGCAGAACTGAAAGCTGCACCGGAAAATGCGGTGGCGAACGCTTACGATATGGTCATCAATGGTTACGAAGTGGGCGGTGGTTCAGTACGTATCCATAATGGTGATATGCAGCAGACGGTGTTTGGTATTCTGGGTATCAACGAAGAGGAACAGCGCGAGAAATTCGGCTTCCTGCTCGACGCTCTGAAATACGGTACTCCGCCGCACGCAGGTCTGGCATTCGGTCTTGACCGTCTGACCATGCTGCTGACCGGCACCGACAATATCCGTGACGTTATCGCCTTCCCGAAAACCACGGCGGCAGCGTGTCTGATGACTGAAGCACCGAGCTTTGCTAACCCGACTGCACTGGCTGAGCTGAGCATTCAGGTTGTGAAGAAGGCTGAGAATAACTGA", + "dna_sequence_length": 1773, + "functions": [ + "aspartyl-tRNA synthetase" + ], + "id": "CDS_1859", + "location": [ + [ + "NC_000913", + 1950522, + "-", + 1773 + ] + ], + "md5": "e3d02c37071d1e9e0004239b6d79fdaf", + "parent_gene": "", + "protein_md5": "b0e3a6ee8141cd32ca4ae3b08c47a7ac", + "protein_translation": "MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN", + "protein_translation_length": 590, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006231" + ], + [ + "gene_synonym", + "ECK1868" + ], + [ + "gene_synonym", + "EcoGene:EG12378" + ], + [ + "gene_synonym", + "GI:90111348" + ], + [ + "gene_synonym", + "GeneID:946384" + ], + [ + "gene_synonym", + "JW5307" + ], + [ + "gene_synonym", + "NP_416381.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI7" + ], + [ + "gene_synonym", + "b1867" + ], + [ + "gene_synonym", + "yecD" + ] + ], + "dna_sequence": "ATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCACATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCGGCGAAATTTCGCGCCAGCGGTCAGCCCGTGTTTCTGGTGCGCGTTGGCTGGTCTGCCGATTACGCTGAAGCATTAAAACAGCCGGTCGATGCGCCCTCACCGGCTAAAGTGTTGCCCGAAAATTGGTGGCAACATCCTGCTGCATTAGGTGCAACCGACAGCGATATCGAAATCATCAAACGTCAATGGGGTGCGTTTTACGGTACGGATCTGGAGTTGCAATTACGCCGCCGAGGTATCGATACAATAGTGTTATGTGGGATCTCGACCAATATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGA", + "dna_sequence_length": 567, + "functions": [ + "isochorismatase family protein" + ], + "id": "CDS_1860", + "location": [ + [ + "NC_000913", + 1950832, + "+", + 567 + ] + ], + "md5": "4554ab8be217f9964a1470f3e12abf62", + "parent_gene": "", + "protein_md5": "9eb2861ceec31a7e766a83fa0a09eaa1", + "protein_translation": "MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006233" + ], + [ + "gene_synonym", + "ECK1869" + ], + [ + "gene_synonym", + "EcoGene:EG12379" + ], + [ + "gene_synonym", + "GI:16129821" + ], + [ + "gene_synonym", + "GeneID:946382" + ], + [ + "gene_synonym", + "JW1857" + ], + [ + "gene_synonym", + "NP_416382.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37348" + ], + [ + "gene_synonym", + "b1868" + ], + [ + "gene_synonym", + "yecE" + ] + ], + "dna_sequence": "ATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCTGCGCTGGCGTGAGCAGACCACAGATGACTTCCGCTTCTGTTTTAAGTTTCCGGCGACCATTTCGCATCAGGCAGCATTACGGCATTGCGATGATTTAGTGACTGAATTTTTGACCCGCATGTCACCGTTGGCTCCGCGCATTGGGCAATACTGGCTGCAACTGCCTGCCACATTCGGCCCACGGGAGCTGCCTGCGCTTTGGCATTTTCTCGATTCTCTTCCTGGCGAATTTAATTATGGCGTGGAAGTCCGCCATCCACAGTTTTTCGCCAAAGGAGAAGAGGAACAAACGCTTAATCGCGGTTTACATCAGCGCGGCGTTAATCGGGTGATTTTAGACAGCCGCCCGGTTCATGCAGCACGTCCACACAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTACATACGCCAGACATTGCCCAGGCACCGGAACTGGTACATACCCTGTGGGAAGACTTACGTAAAACGCTTCCAGAGATCGGAGCAGTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGA", + "dna_sequence_length": 819, + "functions": [ + "UPF0759 family protein" + ], + "id": "CDS_1861", + "location": [ + [ + "NC_000913", + 1951395, + "+", + 819 + ] + ], + "md5": "74b841ea260139c140d541b70b30d87b", + "parent_gene": "", + "protein_md5": "df6b66b597c319b1b3a983078adc63db", + "protein_translation": "MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006235" + ], + [ + "gene_synonym", + "ECK1870" + ], + [ + "gene_synonym", + "EcoGene:EG14032" + ], + [ + "gene_synonym", + "GI:90111349" + ], + [ + "gene_synonym", + "GeneID:946381" + ], + [ + "gene_synonym", + "JW5308" + ], + [ + "gene_synonym", + "NP_416383.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64515" + ], + [ + "gene_synonym", + "b1869" + ], + [ + "gene_synonym", + "yecN" + ] + ], + "dna_sequence": "ATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAGAAACCTGGATGGTGCATATTTGCGGCATCGTTTTGCTTGCTGGTCGTCTGATGCATTATTACGGTTTTCATCACCGTCTGTTCCGCTGGCGACGTTCCGGCATGAGCGCCACCTGGTGTGCGCTGTTGCTGATGGTGCTGGCGAATCTTTGGTATATGCCCTGGGAGTTGGTTTTCTCCCTGCGTTAG", + "dna_sequence_length": 396, + "functions": [ + "MAPEG family inner membrane protein" + ], + "id": "CDS_1862", + "location": [ + [ + "NC_000913", + 1952266, + "+", + 396 + ] + ], + "md5": "68b116c133849c5cf2774e2aef0efb72", + "parent_gene": "", + "protein_md5": "10bf2b136d7e76cf4539f28f5a1cddd6", + "protein_translation": "MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006237" + ], + [ + "gene_synonym", + "ECK1871" + ], + [ + "gene_synonym", + "EcoGene:EG14033" + ], + [ + "gene_synonym", + "GI:16129823" + ], + [ + "gene_synonym", + "GeneID:946380" + ], + [ + "gene_synonym", + "JW1859" + ], + [ + "gene_synonym", + "NP_416384.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76290" + ], + [ + "gene_synonym", + "b1870" + ], + [ + "gene_synonym", + "cmoA" + ], + [ + "gene_synonym", + "yecO" + ] + ], + "dna_sequence": "ATGTCTCACCGCGACACGCTATTTTCTGCCCCTATCGCCAGACTGGGCGACTGGACCTTTGATGAACGGGTAGCTGAAGTCTTCCCGGATATGATCCAGCGTTCCGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTCAACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGA", + "dna_sequence_length": 744, + "functions": [ + "carboxy-SAM synthase" + ], + "id": "CDS_1863", + "location": [ + [ + "NC_000913", + 1952702, + "+", + 744 + ] + ], + "md5": "c0cac81479db8fea612eadbb1ee8c62d", + "parent_gene": "", + "protein_md5": "2f797d95255ffffa73bb6b3a93d50c05", + "protein_translation": "MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHNAGFEHSELWFQCFNFGSLVALKAEDAA", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006241" + ], + [ + "gene_synonym", + "ECK1872" + ], + [ + "gene_synonym", + "EcoGene:EG14034" + ], + [ + "gene_synonym", + "GI:16129824" + ], + [ + "gene_synonym", + "GeneID:946387" + ], + [ + "gene_synonym", + "JW1860" + ], + [ + "gene_synonym", + "NP_416385.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76291" + ], + [ + "gene_synonym", + "b1871" + ], + [ + "gene_synonym", + "cmoB" + ], + [ + "gene_synonym", + "yecP" + ] + ], + "dna_sequence": "ATGATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATGCCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAA", + "dna_sequence_length": 972, + "functions": [ + "tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent" + ], + "id": "CDS_1864", + "location": [ + [ + "NC_000913", + 1953442, + "+", + 972 + ] + ], + "md5": "50a6a0c2e9d6fe561313c51d9100b891", + "parent_gene": "", + "protein_md5": "3677727fb049381a16204e8dbbc3db5e", + "protein_translation": "MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARKP", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006244" + ], + [ + "gene_synonym", + "ECK1873" + ], + [ + "gene_synonym", + "EcoGene:EG13276" + ], + [ + "gene_synonym", + "GI:90111350" + ], + [ + "gene_synonym", + "GeneID:946389" + ], + [ + "gene_synonym", + "JW1861" + ], + [ + "gene_synonym", + "NP_416386.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46923" + ], + [ + "gene_synonym", + "b1872" + ], + [ + "gene_synonym", + "bisZ" + ], + [ + "gene_synonym", + "torZ" + ] + ], + "dna_sequence": "ATGACATTAACAAGACGTGAATTTATTAAACACAGCGGTATTGCCGCTGGAGCGCTGGTGGTGACATCGGCAGCACCGCTCCCCGCATGGGCAGAAGAGAAGGGCGGTAAAATCCTCACCGCGGGACGTTGGGGAGCGATGAACGTAGAAGTGAAGGACGGCAAGATTGTTTCTTCAACAGGCGCGCTGGCGAAAACCATACCGAATTCCTTACAGTCTACGGCGGCGGATCAGGTACACACCACGGCGCGTATTCAGCATCCGATGGTGAGAAAAAGCTATCTCGATAATCCACTGCAACCGGCGAAAGGTCGTGGCGAAGATACCTATGTACAGGTGAGCTGGGAACAGGCATTAAAACTGATTCATGAGCAACATGATCGTATTCGTAAAGCTAACGGACCATCGGCCATTTTTGCCGGATCTTACGGCTGGCGCTCTTCTGGCGTGTTGCATAAAGCGCAAACCTTACTGCAACGTTATATGAACCTGGCGGGCGGTTATTCCGGGCATAGCGGCGATTATTCAACCGGGGCAGCACAGGTGATCATGCCGCATGTGGTCGGTTCTGTAGAGGTGTATGAACAGCAGACCTCCTGGCCGCTGATTCTGGAAAACAGCCAGGTTGTGGTGCTGTGGGGAATGAACCCGCTGAATACCTTAAAAATTGCCTGGAGCAGTACCGATGAGCAAGGGCTGGAATACTTCCATCAGCTGAAAAAATCTGGCAAACCAGTGATTGCCATTGATCCTATCCGCTCCGAAACCATCGAATTCTTTGACGATAATGCCACCTGGATCGCGCCGAATATGGGCACCGACGTGGCACTGATGTTAGGGATTGCGCATACCCTGATGACACAAGGCAAACACGATAAAGTGTTCCTTGAAAAATACACTACCGGGTATCCGCAGTTTGAAGAGTATCTGACAGGTAAGAGCGATAATACGCCGAAGAGCGCGGTCTGGGCGGCGGAAATTACTGGCGTACCGGAAGCGCAGATAGTCAAACTCGCTGAACTGATGGCGGCGAATCGCACAATGCTGATGGCAGGCTGGGGAATTCAGCGCCAGCAATATGGTGAACAGAAACACTGGATGCTGGTGACGCTGGCGGCGATGTTAGGGCAGATTGGTACACCGGGCGGCGGTTTTGGTTTCTCTTATCATTACTCCAACGGTGGCAACCCGACGCGTGTTGGCGGCGTGCTGCCGGAAATGTCTGCGGCGATTGCCGGACATGCCAGCGAGGCCGCTGATGATGGCGGAATGACGGCGATTCCTGTTGCCCGTATCGTCGATGCGCTGGAAAATCCTGGCGGCAAATATCAGCATAACGGTAAAGAACAAACGTATCCGAATATCAAAATGATCTGGTGGGCGGGTGGCGGTAACTTTACCCATCACCAGGATACTAATCGTCTGATTAAAGCATGGCAGAAACCGGAGATGATCGTCGTTTCTGAATGCTACTGGACCGCAGCAGCCAAACACGCAGATATCGTATTACCGATCACCACATCGTTTGAGCGCAATGACTTGACGATGACCGGTGATTACAGCAACCAGCATATTGTGCCGATGAAGCAGGCTGTTGCTCCGCAATTTGAAGCGCGTAACGATTTTGACGTGTTTGCCGATCTTGCGGAATTACTCAAACCTGGCGGAAAAGAGATCTATACCGAAGGTAAAGATGAAATGGCGTGGCTGAAATTTTTCTATGATGCCGCTCAGAAAGGTGCCCGTGCGCAACGCGTCACTATGCCAATGTTTAATGCCTTCTGGCAGCAAAATAAACTGATCGAAATGCGCCACAGCGAGAAGAACGAACAGTACGTTCGTTATGGTGATTTCCGCGCCGATCCGGTGAAAAATGCGCTGGGTACGCCAAGCGGCAAAATTGAAATCTATTCAAAAACGTTGGAAAAATTTGGCTATAAGGATTGCCCGGCACACCCAACCTGGCTGGCTCCTGATGAATGGAAAGGTACCGCCGACGAGAAGCAGTTACAGCTTCTGACCGCACATCCGGCACACCGTTTACACAGTCAGCTTAACTATGCGGAACTGCGTAAAAAATATGCGATCGCCGATCGTGAACCAATCACTATTCACACCGAAGATGCTGCACGCTTTGGTATTGCGAATGGCGATCTGGTGCGTGTCTGGAACAAACGTGGTCAGATTTTGACAGGCGCGGTGGTGACTGACGGGATCAAAAAAGGCGTGGTATGCGTGCATGAAGGTGCATGGCCAGATCTGGAAAATGGCTTGTGTAAAAACGGCAGTGCGAACGTGTTAACGGCGGATATCCCCAGCTCGCAGCTGGCAAATGCCTGTGCCGGTAACTCAGCGTTGGTGTATATCGAAAAATATACGGGCAATGCACCGAAGTTAACGGCGTTTGATCAGCCAGCTGTTCAGGCGTAA", + "dna_sequence_length": 2430, + "functions": [ + "trimethylamine N-oxide reductase system III, catalytic subunit" + ], + "id": "CDS_1865", + "location": [ + [ + "NC_000913", + 1957007, + "-", + 2430 + ] + ], + "md5": "2fb0238f7d34ec5079abe33f2d8fccf9", + "parent_gene": "", + "protein_md5": "a6e63b4e3fd3a7255641f67add96144e", + "protein_translation": "MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFDDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGHASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRHSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLHSQLNYAELRKKYAIADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPKLTAFDQPAVQA", + "protein_translation_length": 809, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006246" + ], + [ + "gene_synonym", + "ECK1874" + ], + [ + "gene_synonym", + "EcoGene:EG13277" + ], + [ + "gene_synonym", + "GI:16129826" + ], + [ + "gene_synonym", + "GeneID:946490" + ], + [ + "gene_synonym", + "JW1862" + ], + [ + "gene_synonym", + "NP_416387.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52005" + ], + [ + "gene_synonym", + "b1873" + ], + [ + "gene_synonym", + "torY" + ], + [ + "gene_synonym", + "yecK" + ] + ], + "dna_sequence": "ATGCGAGGGAAAAAACGCATTGGGTTATTGTTTTTGCTGATAGCGGTTGTGGTTGGTGGCGGCGGGTTATTGCTGGCGCAAAAAGTCTTACATAAAACGTCGGATACAGCATTTTGCCTTTCCTGCCACTCGATGAGTAAACCTTTTGAGGAATATCAGGGAACTGTCCACTTTTCGAACCAGAAAGGGATACGTGCGGAATGTGCCGATTGCCATATTCCAAAGTCAGGGATGGATTATTTATTTGCTAAATTAAAGGCATCTAAAGATATTTATCATGAATTTGTTAGCGGCAAAATAGACAGTGACGATAAGTTCGAAGCTCATCGCCAGGAAATGGCCGAAACAGTATGGAAAGAATTAAAAGCCACTGACTCTGCAACGTGCCGTAGTTGCCATTCTTTTGATGCCATGGATATTGCCTCGCAAAGTGAATCTGCGCAGAAAATGCATAACAAAGCACAAAAGGACAGCGAAACCTGTATCGATTGTCATAAAGGCATTGCCCATTTTCCGCCAGAAATAAAAATGGATGACAACGCGGCGCATGAGCTGGAAAGTCAGGCCGCTACTTCAGTTACTAATGGCGCACATATTTATCCTTTCAAAACTTCTCACATAGGCGAGCTGGCTACCGTGAATCCTGGAACCGATCTCACCGTCGTTGATGCCAGTGGCAAACAGCCGATCGTTCTGTTGCAGGGTTATCAAATGCAGGGCAGTGAAAACACGCTCTACCTGGCGGCAGGTCAACGGCTGGCGCTAGCCACATTAAGTGAAGAAGGTATCAAGGCGCTCACTGTAAACGGGGAATGGCAGGCTGACGAATACGGCAATCAATGGCGTCAGGCGTCTTTACAGGGTGCGCTTACCGATCCCGCATTAGCGGACCGTAAACCGCTATGGCAATACGCTGAAAAACTTGACGATACCTATTGCGCTGGTTGTCATGCCCCTATTGCCGCCGACCATTACACCGTCAATGCGTGGCCGTCCATTGCCAAAGGAATGGGGGCACGAACCAGCATGAGCGAAAACGAACTGGACATTTTAACGCGGTATTTCCAGTACAACGCCAAAGATATTACCGAGAAACAGTGA", + "dna_sequence_length": 1101, + "functions": [ + "TMAO reductase III (TorYZ), cytochrome c-type subunit" + ], + "id": "CDS_1866", + "location": [ + [ + "NC_000913", + 1958132, + "-", + 1101 + ] + ], + "md5": "7c674e45f0fb469b4d89743e8e34eea1", + "parent_gene": "", + "protein_md5": "c53dd96c341b4419ac187a84128dbb5d", + "protein_translation": "MRGKKRIGLLFLLIAVVVGGGGLLLAQKVLHKTSDTAFCLSCHSMSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDSETCIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSHIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006252" + ], + [ + "gene_synonym", + "ECK1875" + ], + [ + "gene_synonym", + "EcoGene:EG12956" + ], + [ + "gene_synonym", + "GI:90111351" + ], + [ + "gene_synonym", + "GeneID:2847756" + ], + [ + "gene_synonym", + "JW1863" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67826" + ], + [ + "gene_synonym", + "YP_025309.2" + ], + [ + "gene_synonym", + "b1874" + ], + [ + "gene_synonym", + "cutC" + ], + [ + "gene_synonym", + "dinY?" + ] + ], + "dna_sequence": "ATGGCATTACTGGAAATTTGCTGTTACAGCATGGAATGTGCACTAACGGCGCAGCAAAACGGCGCAGACAGAGTTGAATTATGCGCAGCCCCAAAAGAGGGGGGCTTAACGCCGTCGTTGGGTGTACTGAAATCCGTGCGCCAGCGGGTGACGATCCCTGTGCATCCGATAATTCGCCCACGCGGTGGTGATTTTTGCTACAGCGACGGTGAGTTTGCCGCCATTCTTGAGGATGTGCGCACGGTCCGCGAATTAGGTTTTCCTGGACTGGTGACGGGCGTTCTCGATGTTGACGGGAATGTCGATATGCCACGAATGGAAAAAATAATGGCTGCTGCCGGTCCGCTGGCAGTGACTTTTCATCGCGCCTTCGATATGTGCGCTAACCCTTTATATACACTCAATAATCTTGCGGAATTGGGCATTGCCCGGGTACTGACATCAGGGCAAAAATCAGACGCACTGCAAGGTTTATCAAAAATTATGGAACTTATTGCCCATCGTGATGCTCCAATCATTATGGCCGGAGCAGGAGTCCGTGCAGAAAACCTGCACCACTTCCTCGATGCCGGAGTGCTGGAAGTCCATAGCTCCGCGGGAGCGTGGCAAGCCTCACCGATGCGTTATCGTAATCAAGGATTGTCCATGTCATCAGATGAACACGCGGACGAGTATTCGCGTTATATCGTAGACGGGGCGGCGGTTGCTGAAATGAAAGGAATCATTGAACGCCATCAGGCCAAATGA", + "dna_sequence_length": 747, + "functions": [ + "copper homeostasis protein" + ], + "id": "CDS_1867", + "location": [ + [ + "NC_000913", + 1959266, + "-", + 747 + ] + ], + "md5": "f7e5485bb29721e1e8f7ccd5c1387a0e", + "parent_gene": "", + "protein_md5": "8e74cfc2e1a9ce8f5b28b208f6ee2a77", + "protein_translation": "MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKGIIERHQAK", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006257" + ], + [ + "gene_synonym", + "ECK1876" + ], + [ + "gene_synonym", + "EcoGene:EG13405" + ], + [ + "gene_synonym", + "GI:90111352" + ], + [ + "gene_synonym", + "GeneID:946415" + ], + [ + "gene_synonym", + "JW5309" + ], + [ + "gene_synonym", + "NP_416389.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52007" + ], + [ + "gene_synonym", + "b1875" + ], + [ + "gene_synonym", + "yecL" + ], + [ + "gene_synonym", + "yecM" + ] + ], + "dna_sequence": "ATGGCGAACTGGCAATCTATCGACGAGCTGCAGGATATTGCATCGGATTTACCGCGATTTATCCACGCATTAGATGAACTTTCCCGCCGTCTGGGGTTGAATATCACTCCGCTGACTGCCGATCACATTTCTTTGCGTTGCCATCAAAACGCCACTGCTGAACGCTGGCGTCGCGGGTTTGAACAGTGTGGCGAGCTTTTGTCAGAAAATATGATCAATGGCAGACCGATTTGTCTGTTTAAATTGCATGAACCGGTACAGGTTGCGCACTGGCAGTTTTCTATTGTGGAGCTACCGTGGCCCGGGGAAAAACGTTACCCACACGAAGGTTGGGAACATATTGAAATCGTTCTGCCGGGTGATCCAGAAACGCTGAATGCCCGTGCGCTGGCATTGCTTTCTGATGAAGGACTCAGCCTACCGGGGATCTCAGTGAAAACCAGTTCGCCAAAAGGTGAGCATGAGCGATTACCGAATCCGACGCTGGCGGTCACCGATGGCAAAACAACTATTAAGTTTCATCCGTGGTCCATTGAAGAGATCGTTGCCAGCGAGCAGTCGGCGTAA", + "dna_sequence_length": 567, + "functions": [ + "putative metal-binding enzyme" + ], + "id": "CDS_1868", + "location": [ + [ + "NC_000913", + 1959846, + "-", + 567 + ] + ], + "md5": "aa74def7aa7ab7a075635b748f00e31c", + "parent_gene": "", + "protein_md5": "c6005499c71d5bf8abf7535f429b54e9", + "protein_translation": "MANWQSIDELQDIASDLPRFIHALDELSRRLGLNITPLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNPTLAVTDGKTTIKFHPWSIEEIVASEQSA", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006264" + ], + [ + "gene_synonym", + "ECK1877" + ], + [ + "gene_synonym", + "EcoGene:EG10071" + ], + [ + "gene_synonym", + "GI:16129828" + ], + [ + "gene_synonym", + "GeneID:946452" + ], + [ + "gene_synonym", + "JW1865" + ], + [ + "gene_synonym", + "NP_416390.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11875" + ], + [ + "gene_synonym", + "argS" + ], + [ + "gene_synonym", + "b1876" + ], + [ + "gene_synonym", + "lov" + ] + ], + "dna_sequence": "GTGAATATTCAGGCTCTTCTCTCAGAAAAAGTCCGTCAGGCCATGATTGCGGCAGGCGCGCCTGCGGATTGCGAACCGCAGGTTCGTCAGTCAGCAAAAGTTCAGTTCGGCGACTATCAGGCTAACGGCATGATGGCAGTTGCTAAAAAACTGGGTATGGCACCGCGACAATTAGCAGAGCAGGTGCTGACTCATCTGGATCTTAACGGTATCGCCAGCAAAGTTGAGATCGCCGGTCCAGGCTTTATCAACATTTTCCTTGATCCGGCATTCCTGGCTGAACATGTTCAGCAGGCGCTGGCGTCCGATCGTCTCGGTGTTGCTACGCCAGAAAAACAGACCATTGTGGTTGACTACTCTGCGCCAAACGTGGCGAAAGAGATGCATGTCGGTCACCTGCGCTCTACCATTATTGGTGACGCAGCAGTGCGTACTCTGGAGTTCCTCGGTCACAAAGTGATTCGCGCAAACCACGTCGGCGACTGGGGCACTCAGTTCGGTATGCTGATTGCATGGCTGGAAAAGCAGCAGCAGGAAAACGCCGGTGAAATGGAGCTGGCTGACCTTGAAGGTTTCTACCGCGATGCGAAAAAGCATTACGATGAAGATGAAGAGTTCGCCGAGCGCGCACGTAACTACGTGGTAAAACTGCAAAGCGGTGACGAATATTTCCGCGAGATGTGGCGCAAACTGGTCGACATCACCATGACGCAGAACCAGATCACCTACGATCGTCTCAACGTGACGCTGACCCGTGATGACGTGATGGGCGAAAGCCTCTACAACCCGATGCTGCCAGGAATTGTGGCGGATCTCAAAGCCAAAGGTCTGGCAGTAGAAAGCGAAGGGGCGACCGTCGTATTCCTTGATGAGTTTAAAAACAAGGAAGGCGAACCGATGGGCGTGATCATTCAGAAGAAAGATGGCGGCTATCTCTACACCACCACTGATATCGCCTGTGCGAAATATCGTTATGAAACACTGCATGCCGATCGCGTGCTGTATTACATCGACTCCCGTCAGCATCAACACCTGATGCAGGCATGGGCGATCGTCCGTAAAGCAGGCTATGTACCGGAATCCGTACCGCTGGAACACCACATGTTCGGCATGATGCTGGGTAAAGACGGCAAACCGTTCAAAACCCGCGCGGGTGGTACAGTGAAACTGGCCGATCTGCTGGATGAAGCCCTGGAACGTGCACGCCGTCTGGTGGCAGAAAAGAACCCGGATATGCCAGCCGACGAGCTGGAAAAACTGGCTAACGCGGTTGGTATTGGTGCGGTGAAATATGCGGATCTCTCCAAAAACCGCACCACGGACTACATCTTCGACTGGGACAACATGCTGGCGTTTGAGGGTAATACCGCGCCATACATGCAGTATGCATACACGCGTGTATTGTCCGTGTTCCGTAAAGCAGAAATTGACGAAGAGCAACTGGCTGCAGCTCCGGTTATCATCCGTGAAGATCGTGAAGCGCAACTGGCAGCTCGCCTGCTGCAGTTTGAAGAAACCCTCACCGTGGTTGCCCGTGAAGGCACGCCGCATGTAATGTGTGCTTACCTGTACGATCTGGCCGGTCTGTTCTCTGGCTTCTACGAGCACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAA", + "dna_sequence_length": 1734, + "functions": [ + "arginyl-tRNA synthetase" + ], + "id": "CDS_1869", + "location": [ + [ + "NC_000913", + 1960062, + "+", + 1734 + ] + ], + "md5": "86d4f5119501955b7a915a9eb31cd655", + "parent_gene": "", + "protein_md5": "283f56ac866ecf772ea1e5027be10b57", + "protein_translation": "MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEIDEEQLAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM", + "protein_translation_length": 577, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006268" + ], + [ + "gene_synonym", + "ECK1878" + ], + [ + "gene_synonym", + "EcoGene:EG14316" + ], + [ + "gene_synonym", + "GI:90111353" + ], + [ + "gene_synonym", + "GeneID:946511" + ], + [ + "gene_synonym", + "JW5310" + ], + [ + "gene_synonym", + "NP_416391.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76296" + ], + [ + "gene_synonym", + "b1877" + ], + [ + "gene_synonym", + "yecT" + ] + ], + "dna_sequence": "GTGTTTAAATTTCTTGTATTAACATTAGGCATTATCTCTTGCCAGGCTTACGCAGAAGATACGGTTATAGTAAACGACCATGACATTTCAGCCATCAAAGATTGTTGGCAAAAAAATTCAGATGATGATACTGACGTTAACGTGATCAAATCATGCCTGCGACAAGAATACAATCTCGTCGATGCGCAATTAAATAAAGCCTATGGTGAAGCTTATCGTTATATAGAACAAGTGCCACGCACAGGTGTAAAAAAACCTGATACCGAACAACTTAACTTGCTTAAAAAATCACAGCGAGCCTGGCTGGATTTTAGGGACAAAGAATGTGAATTAATCCTTTCAAATGAGGACGTTCAGGATTTAAGTGACCCTTATTCTGAATCAGAATGGCTCTCATGTATGATCATACAGACCAATACGCGAACTCGCCAGTTGCAGCTATACCGTAACTCTGAAGATTTTTATCCAAGCCCTTTGACAAGAGGATAA", + "dna_sequence_length": 489, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1870", + "location": [ + [ + "NC_000913", + 1961972, + "+", + 489 + ] + ], + "md5": "933d8e7b5099893781c34b0fd0eee3c0", + "parent_gene": "", + "protein_md5": "7bde97feb52c72e7f094e217275ffd5f", + "protein_translation": "MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDTDVNVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWLDFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLTRG", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006270" + ], + [ + "gene_synonym", + "ECK1879" + ], + [ + "gene_synonym", + "EcoGene:EG14013" + ], + [ + "gene_synonym", + "GI:16129830" + ], + [ + "gene_synonym", + "GeneID:946094" + ], + [ + "gene_synonym", + "JW1867" + ], + [ + "gene_synonym", + "NP_416392.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76297" + ], + [ + "gene_synonym", + "b1878" + ], + [ + "gene_synonym", + "flhE" + ] + ], + "dna_sequence": "ATGAGAACCTTATTAGCAATATTATTGTTTCCGCTGCTGGTGCAAGCCGCCGGGGAGGGGATGTGGCAGGCAAGTAGTGTAGGAATTACGCTAAATCATCGCGGTGAGTCGATGTCGTCTGCGCCTCTTTCTACGCGACAACCTGCTTCAGGATTGATGACGCTGGTAGCGTGGCGTTATCAGCTTATCGGCCCGACACCTTCAGGACTGCGGGTTCGCTTGTGTTCGCAATCTCGTTGTGTCGAATTAGAGGGGCAGAGCGGAACCACCGTGGCCTTTTCCGGTATAGCGGCAGCAGAACCGTTGCGATTTATCTGGGAAGTGCCAGGCGGTGGGCGGTTAATTCCACCGCTAAAGGTACAACGTAATGAAGTGATTGTGAATTATCGCTGA", + "dna_sequence_length": 393, + "functions": [ + "proton seal during flagellar secretion" + ], + "id": "CDS_1871", + "location": [ + [ + "NC_000913", + 1962972, + "-", + 393 + ] + ], + "md5": "36c1439be594639e005faba8446e3fe0", + "parent_gene": "", + "protein_md5": "9d16631fabd7e8200bfe24e3aa1521be", + "protein_translation": "MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPPLKVQRNEVIVNYR", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006272" + ], + [ + "gene_synonym", + "ECK1880" + ], + [ + "gene_synonym", + "EcoGene:EG14273" + ], + [ + "gene_synonym", + "GI:16129831" + ], + [ + "gene_synonym", + "GeneID:946390" + ], + [ + "gene_synonym", + "JW1868" + ], + [ + "gene_synonym", + "NP_416393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76298" + ], + [ + "gene_synonym", + "b1879" + ], + [ + "gene_synonym", + "flaH" + ], + [ + "gene_synonym", + "flhA" + ] + ], + "dna_sequence": "ATGAGTAATCTGGCCGCGATGCTGCGCCTGCCCGCAAACCTGAAATCGACACAATGGCAGATCCTTGCCGGACCGATTTTGATCCTGTTGATCTTGTCGATGATGGTGCTGCCACTGCCCGCATTCATACTCGACCTGTTGTTTACCTTCAATATTGCCTTGTCGATCATGGTGTTGCTGGTGGCGATGTTTACCCAGCGCACGCTTGAGTTTGCTGCGTTTCCGACCATTCTGTTGTTTACCACGCTGTTGCGTCTGGCACTTAACGTGGCTTCAACCCGTATCATTTTAATGGAAGGGCATACCGGCGCGGCGGCGGCAGGGAAGGTGGTCGAAGCGTTCGGTCACTTCCTCGTTGGTGGCAATTTCGCTATCGGTATCGTGGTGTTTGTCATTCTCGTGATCATCAACTTTATGGTCATTACCAAAGGTGCCGGGCGTATCGCAGAAGTGGGTGCGCGCTTTGTTCTCGATGGTATGCCGGGTAAGCAGATGGCGATTGACGCCGACCTTAACGCCGGATTGATTGGTGAAGATGAGGCGAAAAAACGCCGCTCCGAAGTGACTCAGGAAGCCGATTTTTACGGCTCAATGGACGGGGCAAGTAAGTTTGTTCGCGGCGATGCCATCGCCGGGATCCTCATCATGGTCATTAACATTGTCGGCGGGTTGCTGGTCGGCGTGCTGCAACATGGCATGAGCATGGGACACGCGGCGGAAAGTTATACGCTATTGACCATTGGCGACGGTCTGGTGGCACAAATTCCGGCGCTGGTGATTTCTACCGCCGCGGGGGTCATCGTTACGCGTGTCAGCACCGATCAGGATGTTGGCGAGCAGATGGTGAATCAGCTTTTCAGTAACCCAAGCGTTATGTTGTTAAGCGCCGCCGTGCTCGGTTTACTCGGCCTGGTGCCTGGAATGCCGAACCTGGTATTTTTGCTGTTCACTGCCGGATTGCTCGGGCTGGCCTGGTGGATACGCGGACGCGAACAAAAAGCGCCTGCCGAACCCAAACCGGTAAAAATGGCAGAGAATAATACCGTTGTCGAAGCGACGTGGAACGATGTACAACTGGAAGATTCTCTGGGAATGGAAGTGGGTTATCGACTGATCCCGATGGTCGATTTCCAGCAGGATGGTGAGTTGTTGGGCCGTATACGCAGTATCCGCAAGAAATTTGCCCAGGAGATGGGATTTCTGCCGCCAGTGGTGCACATTCGCGACAATATGGATCTGCAACCTGCCCGCTATCGCATTTTGATGAAAGGCGTGGAGATTGGCAGTGGTGATGCTTATCCGGGGCGCTGGCTGGCGATTAACCCTGGAACCGCTGCCGGGACGTTACCTGGTGAGGCGACCGTCGATCCGGCATTTGGCCTGAATGCTATCTGGATTGAAAGTGCGCTAAAAGAACAGGCGCAGATTCAGGGGTACACAGTGGTTGAGGCCAGCACGGTGGTAGCAACGCATCTTAACCACCTCATTAGCCAGCATGCCGCAGAGCTGTTTGGTCGTCAGGAGGCGCAACAGCTGTTGGATCGCGTCGCCCAGGAGATGCCAAAGCTGACGGAAGATCTCGTTCCTGGCGTCGTCACGCTCACCACACTGCATAAAGTGCTGCAAAATCTCCTCGATGAAAAAGTACCGATTCGCGATATGCGCACCATTCTCGAAACGCTGGCGGAACATGCGCCCATCCAAAGCGATCCACATGAATTAACCGCCGTCGTGCGCGTGGCGTTGGGACGGGCGATTACCCAGCAGTGGTTTCCTGGCAAAGATGAAGTCCATGTTATTGGCCTCGATACACCGCTGGAACGTTTGTTACTACAGGCGCTGCAGGGCGGGGGAGGACTGGAGCCAGGGCTGGCGGATCGTTTACTGGCGCAAACTCAGGAAGCGCTATCCCGTCAGGAGATGCTGGGTGCGCCGCCAGTATTGTTGGTGAACCACGCGCTGCGACCATTATTGTCTCGCTTCCTGCGCCGCAGCTTGCCGCAGTTAGTGGTCCTGTCGAATCTGGAACTGTCTGATAACCGACATATCCGCATGACGGCGACAATTGGCGGCAAATAA", + "dna_sequence_length": 2079, + "functions": [ + "putative flagellar export pore protein" + ], + "id": "CDS_1872", + "location": [ + [ + "NC_000913", + 1965050, + "-", + 2079 + ] + ], + "md5": "88454fa79e60c53300cd16ef680c3591", + "parent_gene": "", + "protein_md5": "925b09076802fc2be6a36392faae79ea", + "protein_translation": "MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIGGK", + "protein_translation_length": 692, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006275" + ], + [ + "gene_synonym", + "ECK1881" + ], + [ + "gene_synonym", + "EcoGene:EG14035" + ], + [ + "gene_synonym", + "GI:16129832" + ], + [ + "gene_synonym", + "GeneID:946391" + ], + [ + "gene_synonym", + "JW1869" + ], + [ + "gene_synonym", + "NP_416394.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76299" + ], + [ + "gene_synonym", + "b1880" + ], + [ + "gene_synonym", + "flaG" + ], + [ + "gene_synonym", + "flhB" + ], + [ + "gene_synonym", + "yecQ" + ] + ], + "dna_sequence": "GTGTCTGACGAGAGCGACGACAAAACAGAAGCCCCCACACCTCACCGACTAGAAAAAGCGCGGGAAGAGGGGCAAATCCCGCGTTCCCGTGAACTGACCTCACTGCTGATTTTGCTGGTGGGCGTTAGTGTTATCTGGTTTGGCGGTGTGTCGCTGGCCCGTCGATTGTCGGGCATGCTCTCCGCTGGGCTGCATTTTGATCACAGTATTATCAATGACCCGAATCTGATCCTCGGGCAGATTATTCTGCTGATCAGAGAAGCCATGCTGGCGCTGCTGCCGCTGATTAGCGGCGTGGTGCTGGTGGCGCTCATTTCTCCGGTCATGCTGGGAGGGCTGGTATTTAGCGGCAAATCCTTGCAGCCGAAGTTTTCCAAACTCAACCCGCTACCGGGCATTAAACGGATGTTCTCGGCTCAGACTGGCGCGGAGTTGCTTAAAGCAATTTTGAAAACCATCCTGGTTGGCAGCGTGACGGGGTTTTTTCTCTGGCATCACTGGCCGCAGATGATGCGCTTGATGGCCGAGTCTCCGATTACCGCCATGGGTAATGCGATGGATTTGGTAGGGCTATGCGCACTGCTGGTGGTGCTTGGTGTCATTCCAATGGTGGGATTTGACGTCTTTTTCCAAATATTCAGCCACCTGAAAAAGCTGCGTATGTCACGGCAGGATATTCGTGATGAGTTCAAACAAAGCGAAGGTGACCCTCATGTTAAAGGGCGGATCCGTCAGATGCAGCGAGCTGCTGCACGGCGTCGGATGATGGCCGATGTGCCGAAAGCGGATGTCATTGTCAATAACCCGACCCACTATTCGGTAGCGTTGCAGTATGACGAAAACAAAATGAGCGCACCGAAAGTGGTCGCTAAAGGTGCAGGGCTGGTCGCGCTGCGCATTCGTGAAATTGGCGCTGAAAATAACGTCCCGACGCTTGAAGCGCCGCCGCTGGCGCGAGCGCTGTATCGACATGCGGAGATTGGTCAACAAATCCCGGGTCAACTGTACGCCGCGGTGGCGGAAGTGCTGGCCTGGGTCTGGCAACTGAAACGCTGGCGTCTGGCTGGTGGACAGCGCCCTGTACAACCTACTCATCTTCCGGTGCCGGAAGCCCTGGATTTTATTAACGAGAAACCGACCCATGAGTAA", + "dna_sequence_length": 1149, + "functions": [ + "flagellin export apparatus, substrate specificity protein" + ], + "id": "CDS_1873", + "location": [ + [ + "NC_000913", + 1966191, + "-", + 1149 + ] + ], + "md5": "f9b9981bc43ec1c9429156e1f25700c4", + "parent_gene": "", + "protein_md5": "d54f7a96ccfa05cc547e68f062f87d1a", + "protein_translation": "MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHLPVPEALDFINEKPTHE", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006278" + ], + [ + "gene_synonym", + "ECK1882" + ], + [ + "gene_synonym", + "EcoGene:EG10151" + ], + [ + "gene_synonym", + "GI:16129833" + ], + [ + "gene_synonym", + "GeneID:946392" + ], + [ + "gene_synonym", + "JW1870" + ], + [ + "gene_synonym", + "NP_416395.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9H9" + ], + [ + "gene_synonym", + "b1881" + ], + [ + "gene_synonym", + "cheZ" + ] + ], + "dna_sequence": "ATGATGCAACCATCAATCAAACCTGCTGACGAGCATTCAGCTGGCGATATCATTGCGCGCATCGGCAGCCTGACGCGTATGCTGCGCGACAGTTTGCGGGAACTGGGGCTGGATCAGGCCATTGCCGAAGCGGCGGAAGCCATCCCCGATGCGCGCGATCGTTTGTACTATGTTGTGCAGATGACCGCCCAGGCTGCGGAGCGGGCGCTGAACAGTGTTGAGGCGTCACAACCGCATCAGGATCAAATGGAGAAATCAGCAAAAGCGTTAACCCAACGTTGGGATGACTGGTTTGCCGATCCGATTGACCTTGCCGACGCCCGTGAACTGGTAACAGATACACGACAATTTCTGGCAGATGTACCCGCGCATACCAGCTTTACTAACGCGCAACTGCTGGAAATCATGATGGCGCAGGATTTTCAGGATCTCACCGGGCAGGTCATTAAGCGGATGATGGATGTCATTCAGGAGATCGAACGCCAGTTGCTGATGGTGCTGTTGGAAAACATCCCGGAACAGGAGTCGCGTCCAAAACGTGAAAACCAGAGTTTGCTTAATGGACCTCAGGTCGATACCAGCAAAGCCGGTGTGGTAGCCAGTCAGGATCAGGTGGACGATTTGTTGGATAGTCTTGGATTTTGA", + "dna_sequence_length": 645, + "functions": [ + "chemotaxis regulator, protein phosphatase for CheY" + ], + "id": "CDS_1874", + "location": [ + [ + "NC_000913", + 1967037, + "-", + 645 + ] + ], + "md5": "e36c8a368928555bda53d1299998a1d6", + "parent_gene": "", + "protein_md5": "2743f67b48ad68f4b8bd3b756683bfac", + "protein_translation": "MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF", + "protein_translation_length": 214, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006280" + ], + [ + "gene_synonym", + "ECK1883" + ], + [ + "gene_synonym", + "EcoGene:EG10150" + ], + [ + "gene_synonym", + "GI:16129834" + ], + [ + "gene_synonym", + "GeneID:946393" + ], + [ + "gene_synonym", + "JW1871" + ], + [ + "gene_synonym", + "NP_416396.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE67" + ], + [ + "gene_synonym", + "b1882" + ], + [ + "gene_synonym", + "cheY" + ] + ], + "dna_sequence": "ATGGCGGATAAAGAACTTAAATTTTTGGTTGTGGATGACTTTTCCACCATGCGACGCATAGTGCGTAACCTGCTGAAAGAGCTGGGATTCAATAATGTTGAGGAAGCGGAAGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGGTTATGGATTTGTTATCTCCGACTGGAACATGCCCAATATGGATGGCCTGGAATTGCTGAAAACAATTCGTGCGGATGGCGCGATGTCGGCATTGCCAGTGTTAATGGTGACTGCAGAAGCGAAGAAAGAGAACATCATTGCTGCGGCGCAAGCGGGGGCCAGTGGCTATGTGGTGAAGCCATTTACCGCCGCGACGCTGGAGGAAAAACTCAACAAAATCTTTGAGAAACTGGGCATGTGA", + "dna_sequence_length": 390, + "functions": [ + "chemotaxis regulator transmitting signal to flagellar motor component" + ], + "id": "CDS_1875", + "location": [ + [ + "NC_000913", + 1967437, + "-", + 390 + ] + ], + "md5": "3f56faab576b55e2488cd227f4c2b63d", + "parent_gene": "", + "protein_md5": "308c2c704e7f4631f2bcb6223796b8cb", + "protein_translation": "MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLGM", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006284" + ], + [ + "gene_synonym", + "ECK1884" + ], + [ + "gene_synonym", + "EcoGene:EG10147" + ], + [ + "gene_synonym", + "GI:16129835" + ], + [ + "gene_synonym", + "GeneID:946394" + ], + [ + "gene_synonym", + "JW1872" + ], + [ + "gene_synonym", + "NP_416397.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07330" + ], + [ + "gene_synonym", + "b1883" + ], + [ + "gene_synonym", + "cheB" + ] + ], + "dna_sequence": "ATGAGCAAAATCAGGGTGTTATCTGTCGATGATTCGGCACTGATGCGCCAGATCATGACAGAAATCATCAACAGCCATAGCGACATGGAAATGGTGGCGACCGCGCCTGATCCGCTGGTCGCGCGTGACTTGATTAAGAAATTCAATCCCGATGTGCTGACGCTGGATGTTGAAATGCCGCGGATGGACGGACTGGATTTCCTCGAAAAATTAATGCGTTTGCGTCCAATGCCCGTTGTGATGGTTTCTTCCCTGACCGGCAAAGGGTCAGAAGTCACGCTGCGCGCGCTGGAGCTGGGGGCGATAGATTTTGTCACCAAACCGCAACTGGGTATTCGCGAAGGTATGCTGGCGTATAACGAAATGATTGCTGAAAAGGTGCGTACGGCAGCAAAGGCGAGCCTTGCAGCACATAAGCCATTGTCGGCACCGACAACGCTGAAGGCGGGGCCGTTGTTGAGTTCTGAAAAACTGATTGCGATTGGTGCTTCAACGGGTGGAACTGAGGCAATTCGTCACGTACTGCAACCGTTGCCGCTTTCCAGCCCGGCACTGTTAATTACCCAGCATATGCCGCCCGGTTTCACCCGCTCTTTTGCCGACAGACTTAATAAGCTTTGCCAGATCGGGGTTAAAGAAGCCGAAGACGGAGAACGTGTCTTGCCGGGGCATGCCTATATTGCGCCGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTACCAAATCAAAATTCACGATGGCCCGGCGGTTAACCGTCATCGGCCTTCGGTAGATGTGTTGTTCCATTCTGTCGCCAAACAGGCGGGGCGTAATGCGGTTGGGGTGATCCTGACCGGTATGGGCAACGACGGCGCGGCGGGAATGTTGGCGATGCGTCAGGCGGGGGCATGGACCCTTGCGCAAAACGAAGCAAGTTGCGTGGTGTTCGGCATGCCGCGCGAGGCCATCAATATGGGTGGTGTCTGCGAAGTGGTCGATCTTAGCCAGGTAAGCCAGCAAATGTTGGCAAAAATTAGTGCCGGACAGGCGATACGTATTTAA", + "dna_sequence_length": 1050, + "functions": [ + "fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA" + ], + "id": "CDS_1876", + "location": [ + [ + "NC_000913", + 1968501, + "-", + 1050 + ] + ], + "md5": "db98bd5c1862c43e2145fe3fe64cf2db", + "parent_gene": "", + "protein_md5": "df128e8a2b34ea67f9c394b8f56f89dc", + "protein_translation": "MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYNEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELSRSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006286" + ], + [ + "gene_synonym", + "ECK1885" + ], + [ + "gene_synonym", + "EcoGene:EG10148" + ], + [ + "gene_synonym", + "GI:16129836" + ], + [ + "gene_synonym", + "GeneID:946396" + ], + [ + "gene_synonym", + "JW1873" + ], + [ + "gene_synonym", + "NP_416398.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07364" + ], + [ + "gene_synonym", + "b1884" + ], + [ + "gene_synonym", + "cheR" + ], + [ + "gene_synonym", + "cheX" + ] + ], + "dna_sequence": "ATGACTTCATCTCTGCCCTGTGGGCAAACGTCTTTATTGTTACAGATGACCGAGCGCCTGGCGCTTTCCGACGCGCATTTTCGGCGGATAAGTCAATTGATCTATCAACGAGCCGGGATCGTTCTGGCTGACCATAAACGCGACATGGTTTACAACCGACTGGTTCGTCGTTTGCGTTCGCTGGGACTGACGGATTTCGGTCATTATCTGAACTTGCTGGAATCTAATCAGCACAGCGGTGAGTGGCAGGCGTTTATCAATTCGCTGACCACGAATCTGACGGCATTTTTCCGTGAGGCACATCATTTCCCTCTGCTCGCGGATCACGCACGTCGCCGTTCTGGCGAGTATCGCGTATGGAGCGCGGCGGCTTCGACCGGCGAAGAGCCGTACAGCATTGCGATGACGCTGGCTGACACATTGGGCACCGCGCCCGGACGCTGGAAAGTGTTTGCCAGTGATATCGACACCGAAGTGCTGGAAAAAGCCAGAAGCGGTATCTATCGCCATGAAGAGTTGAAAAACCTGACGCCGCAGCAACTGCAACGGTATTTCATGCGAGGGACGGGGCCGCATGAAGGGCTGGTACGCGTGCGTCAGGAGCTGGCGAACTATGTTGATTTTGCCCCGCTGAATCTACTGGCGAAACAGTACACCGTGCCGGGGCCGTTTGATGCGATCTTCTGTCGTAACGTCATGATCTACTTCGATCAAACTACCCAGCAGGAGATTTTGCGCCGCTTTGTTCCGCTCCTTAAACCCGACGGATTGCTGTTTGCGGGTCACTCTGAAAACTTTAGCCACCTTGAGCGCCGCTTCACGCTGCGTGGTCAGACGGTGTATGCGCTAAGTAAGGATTAA", + "dna_sequence_length": 861, + "functions": [ + "chemotaxis regulator, protein-glutamate methyltransferase" + ], + "id": "CDS_1877", + "location": [ + [ + "NC_000913", + 1969364, + "-", + 861 + ] + ], + "md5": "266d72bbd563c24b0f8427abc4eaf8ba", + "parent_gene": "", + "protein_md5": "6f6f430ab9ea53e7d08bd8bd496919f3", + "protein_translation": "MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006288" + ], + [ + "gene_synonym", + "ECK1886" + ], + [ + "gene_synonym", + "EcoGene:EG10987" + ], + [ + "gene_synonym", + "GI:16129837" + ], + [ + "gene_synonym", + "GeneID:946397" + ], + [ + "gene_synonym", + "JW1874" + ], + [ + "gene_synonym", + "NP_416399.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07018" + ], + [ + "gene_synonym", + "b1885" + ], + [ + "gene_synonym", + "tap" + ] + ], + "dna_sequence": "ATGTTTAATCGTATTCGAATTTCGACCACGCTGTTTTTAATTTTGATTCTCTGCGGGATCTTGCAGATTGGCAGTAACGGCATGTCTTTTTGGGCATTTCGCGACGATTTGCAACGACTGAATCAGGTCGAGCAGAGCAATCAGCAACGTGCGGCATTAGCGCAAACTCGGGCGGTAATGTTACAGGCCAGTACCGCGCTGAACAAAGCGGGCACTCTGACGGCACTTAGCTATCCGGCGGATGACATTAAAACGTTGATGACGACGGCGCGCGCCAGTCTGACGCAATCCACCACGCTGTTTAAAAGTTTTATGGCGATGACTGCGGGCAACGAGCACGTCAGGGGATTGCAAAAAGAGACGGAGAAAAGTTTTGCCCGCTGGCACAACGATCTCGAACATCAGGCGACCTGGCTTGAAAGTAATCAACTTTCGGATTTCCTCACTGCGCCGGTGCAGGGATCACAGAATGCGTTTGACGTTAACTTTGAGGCCTGGCAGCTGGAGATCAACCATGTGCTGGAAGCCGCCAGTGCGCAAAGCCAGCGTAACTATCAGATTTCGGCACTGGTGTTTATCAGCATGATTATTGTTGCGGCGATCTACATCAGCAGTGCGCTGTGGTGGACGCGCAAGATGATTGTTCAACCACTGGCCATTATCGGTAGCCATTTTGACAGCATTGCTGCGGGTAATCTGGCGCGTCCGATTGCGGTATATGGTCGTAATGAGATCACCGCCATTTTTGCCAGTCTGAAGACCATGCAGCAGGCTTTGCGTGGGACGGTAAGTGATGTGCGTAAGGGAAGCCAGGAGATGCACATTGGTATCGCGGAGATTGTCGCAGGCAATAACGATCTCTCAAGTCGTACCGAACAGCAGGCGGCATCGCTGGCACAAACGGCCGCCAGTATGGAGCAATTAACCGCCACGGTAGGGCAAAACGCCGATAACGCACGACAGGCGTCGGAACTGGCAAAAAATGCCGCGACAACGGCGCAGGCGGGCGGTGTTCAGGTCAGTACCATGACTCACACCATGCAGGAGATCGCCACCAGCTCGCAAAAAATTGGCGACATTATCAGCGTTATCGACGGAATTGCTTTCCAGACCAATATTCTGGCCCTGAATGCGGCAGTGGAAGCGGCTCGCGCCGGAGAGCAGGGGCGTGGTTTTGCGGTAGTGGCAGGTGAAGTGCGCAATCTTGCCAGCCGTAGCGCGCAGGCAGCAAAAGAGATCAAAGGGCTGATCGAAGAGTCAGTCAATCGTGTCCAGCAGGGTTCGAAACTGGTGAATAACGCCGCCGCGACCATGATCGATATTGTCAGTTCGGTGACCCGCGTGAACGACATTATGGGAGAAATTGCCTCTGCGTCGGAAGAACAACAGCGGGGGATTGAGCAGGTTGCACAGGCTGTCAGCCAGATGGATCAGGTGACTCAGCAGAACGCCTCGCTGGTAGAAGAAGCGGCGGTGGCAACGGAACAACTGGCGAATCAGGCCGACCATCTTTCGTCGCGTGTGGCGGTATTTACCCTTGAAGAACATGAAGTAGCACGACATGAGTCGGTGCAGTTACAAATTGCGCCAGTGGTATCCTGA", + "dna_sequence_length": 1602, + "functions": [ + "methyl-accepting protein IV" + ], + "id": "CDS_1878", + "location": [ + [ + "NC_000913", + 1970984, + "-", + 1602 + ] + ], + "md5": "d8c25ca4be670b1c78fb0e85c4380333", + "parent_gene": "", + "protein_md5": "45e286554e3df152f56813118e2fe79a", + "protein_translation": "MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQRAALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFKSFMAMTAGNEHVRGLQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFDVNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADHLSSRVAVFTLEEHEVARHESVQLQIAPVVS", + "protein_translation_length": 533, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006290" + ], + [ + "gene_synonym", + "ECK1887" + ], + [ + "gene_synonym", + "EcoGene:EG10988" + ], + [ + "gene_synonym", + "GI:16129838" + ], + [ + "gene_synonym", + "GeneID:946399" + ], + [ + "gene_synonym", + "JW1875" + ], + [ + "gene_synonym", + "NP_416400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07017" + ], + [ + "gene_synonym", + "b1886" + ], + [ + "gene_synonym", + "cheM" + ], + [ + "gene_synonym", + "tar" + ] + ], + "dna_sequence": "ATGATTAACCGTATCCGCGTAGTCACGCTGTTGGTAATGGTGCTGGGGGTATTCGCACTGTTACAGCTTATTTCCGGCAGTCTGTTTTTTTCTTCCCTTCACCATAGCCAGAAGAGCTTTGTGGTTTCCAATCAATTACGGGAACAGCAGGGCGAGCTGACGTCAACCTGGGATTTAATGCTGCAAACGCGCATTAACCTGAGTCGTTCAGCGGTACGGATGATGATGGATTCCTCCAATCAACAAAGTAACGCCAAAGTTGAATTGCTCGATAGCGCCAGGAAAACATTGGCGCAGGCAGCGACGCATTATAAAAAATTCAAAAGCATGGCACCGTTACCTGAAATGGTCGCTACCAGTCGTAATATTGATGAAAAATATAAAAACTATTACACAGCGTTAACTGAACTGATTGATTATCTAGATTATGGCAATACTGGAGCTTATTTCGCTCAGCCAACCCAGGGAATGCAAAATGCAATGGGCGAAGCGTTTGCTCAGTACGCCCTCAGCAGTGAAAAACTGTATCGCGATATCGTCACTGACAACGCAGATGATTACCGATTTGCCCAGTGGCAACTGGCGGTTATCGCGCTGGTGGTGGTATTGATTCTGCTGGTGGCGTGGTACGGCATTCGCCGTATGTTGCTTACTCCGCTGGCAAAAATTATTGCTCACATTCGCGAAATCGCCGGTGGTAACCTGGCGAATACCCTGACCATTGACGGGCGCAGTGAAATGGGCGACCTGGCGCAGAGCGTTTCACATATGCAACGCTCTTTGACTGACACCGTCACTCATGTCCGCGAAGGTTCAGATGCCATCTATGCCGGTACCCGTGAAATTGCGGCGGGCAACACCGATCTTTCCTCCCGTACTGAACAGCAGGCATCCGCGCTGGAAGAAACTGCCGCCAGCATGGAGCAGCTCACCGCGACAGTGAAGCAAAACGCCGATAACGCCCGCCAGGCCTCGCAACTGGCGCAAAGTGCCTCCGACACCGCCCAGCACGGCGGCAAAGTGGTGGATGGCGTAGTGAAAACGATGCATGAGATCGCCGATAGTTCGAAGAAAATTGCCGACATTATCAGCGTTATCGACGGTATTGCCTTCCAGACTAATATCCTCGCGCTGAATGCCGCGGTTGAAGCCGCGCGTGCGGGTGAACAGGGCCGTGGTTTTGCCGTGGTGGCGGGTGAAGTGCGTAATCTTGCCAGTCGCAGCGCCCAGGCGGCAAAAGAGATCAAAGCCCTCATTGAAGACTCCGTCTCACGCGTTGATACCGGTTCGGTGCTGGTCGAAAGCGCCGGGGAAACAATGAACAATATCGTCAATGCTGTCACTCGCGTGACTGACATTATGGGCGAGATTGCATCGGCATCGGATGAACAGAGCCGTGGCATCGATCAAGTCGCATTGGCGGTTTCGGAAATGGATCGCGTCACGCAACAGAACGCATCGCTGGTGCAGGAATCAGCTGCCGCCGCCGCTGCGCTGGAAGAACAGGCGAGTCGTTTAACGCAAGCAGTTTCCGCGTTCCGTCTGGCAGCCAGCCCACTCACCAATAAACCGCAAACACCATCCCGTCCTGCCAGTGAGCAACCACCGGCTCAGCCACGACTGCGAATTGCTGAACAAGATCCAAACTGGGAAACATTTTGA", + "dna_sequence_length": 1662, + "functions": [ + "methyl-accepting chemotaxis protein II" + ], + "id": "CDS_1879", + "location": [ + [ + "NC_000913", + 1972691, + "-", + 1662 + ] + ], + "md5": "877b1f61f49c70ec1ef1884df9d53fe8", + "parent_gene": "", + "protein_md5": "ff05f294e6bf7a816da63051f614c5d8", + "protein_translation": "MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF", + "protein_translation_length": 553, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006292" + ], + [ + "gene_synonym", + "ECK1888" + ], + [ + "gene_synonym", + "EcoGene:EG10149" + ], + [ + "gene_synonym", + "GI:16129839" + ], + [ + "gene_synonym", + "GeneID:946400" + ], + [ + "gene_synonym", + "JW1876" + ], + [ + "gene_synonym", + "NP_416401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A964" + ], + [ + "gene_synonym", + "b1887" + ], + [ + "gene_synonym", + "cheW" + ] + ], + "dna_sequence": "ATGACCGGTATGACGAATGTAACAAAGCTGGCCAGCGAGCCGTCAGGCCAGGAATTTCTGGTATTTACCCTTGGTGATGAAGAGTACGGTATTGATATCCTGAAAGTGCAGGAGATCCGTGGCTACGATCAGGTAACACGGATTGCGAACACGCCAGCGTTTATCAAAGGCGTCACGAATCTGCGCGGCGTTATTGTGCCGATTGTTGACTTACGAATTAAGTTCAGCCAGGTGGATGTGGACTATAACGACAACACGGTAGTTATCGTCCTGAATCTCGGACAGCGGGTGGTCGGCATCGTGGTTGACGGCGTCTCAGACGTGCTTTCATTGACGGCGGAGCAAATTCGTCCGGCACCGGAATTTGCCGTGACGCTTTCAACAGAATATCTCACTGGACTGGGCGCACTGGGCGACCGGATGTTGATTCTGGTGAACATCGAAAAACTGCTGAACAGCGAAGAGATGGCGCTGTTAGATAGCGCGGCGTCAGAAGTGGCGTAA", + "dna_sequence_length": 504, + "functions": [ + "purine-binding chemotaxis protein" + ], + "id": "CDS_1880", + "location": [ + [ + "NC_000913", + 1973339, + "-", + 504 + ] + ], + "md5": "c479e1a8bce3a139a374d375a05d55f4", + "parent_gene": "", + "protein_md5": "fd56555bf7be884ab313102eaabc0485", + "protein_translation": "MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006294" + ], + [ + "gene_synonym", + "ECK1889" + ], + [ + "gene_synonym", + "EcoGene:EG10146" + ], + [ + "gene_synonym", + "GI:16129840" + ], + [ + "gene_synonym", + "GeneID:946401" + ], + [ + "gene_synonym", + "JW1877" + ], + [ + "gene_synonym", + "NP_416402.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07363" + ], + [ + "gene_synonym", + "b1888" + ], + [ + "gene_synonym", + "cheA" + ] + ], + "dna_sequence": "GTGAGCATGGATATAAGCGATTTTTATCAGACATTTTTTGATGAAGCGGACGAACTGTTGGCTGACATGGAGCAGCATTTGCTGGTTTTGCAGCCGGAAGCGCCAGATGCCGAACAATTGAATGCCATCTTTCGGGCTGCCCACTCGATCAAAGGAGGGGCAGGAACTTTTGGCTTCAGCGTTTTGCAGGAAACCACGCATCTGATGGAAAACCTGCTCGATGAAGCCAGACGAGGTGAGATGCAACTCAACACCGACATTATCAATCTGTTTTTGGAAACGAAGGACATCATGCAAGAACAGCTCGACGCTTATAAACAGTCGCAAGAGCCGGATGCCGCCAGCTTCGATTATATCTGCCAGGCCTTGCGTCAACTGGCATTAGAAGCGAAAGGCGAAACGCCATCCGCAGTGACCCGATTAAGTGTGGTTGCCAAAAGTGAACCGCAAGATGAGCAGAGTCGCAGTCAGTCGCCGCGACGAATTATCCTTTCGCGCCTGAAGGCCGGGGAAGTCGACCTGCTGGAAGAAGAACTGGGACATCTGACAACGTTAACTGACGTGGTGAAAGGGGCGGATTCGCTCTCGGCAATATTACCGGGCGACATCGCCGAAGATGACATCACAGCGGTACTCTGTTTTGTGATTGAAGCCGATCAGATTACCTTTGAAACAGTAGAAGTCTCGCCAAAAATATCCACCCCACCAGTGCTTAAACTGGCAGCCGAACAAGCGCCAACCGGCCGCGTGGAGCGGGAAAAAACGACGCGCAGCAATGAATCCACCAGCATCCGTGTAGCGGTAGAAAAGGTTGATCAATTAATTAACCTCGTCGGCGAGCTGGTTATCACCCAGTCCATGCTTGCCCAGCGTTCCAGCGAACTGGACCCGGTTAATCATGGTGATTTGATAACCAGCATGGGGCAGTTACAACGTAACGCCCGTGATTTGCAGGAATCAGTGATGTCGATTCGCATGATGCCGATGGAATATGTTTTTAGTCGCTATCCCCGGCTGGTGCGTGATCTGGCGGGAAAACTCGGCAAGCAGGTAGAACTGACGCTGGTGGGCAGTTCTACTGAACTCGACAAAAGCCTGATAGAACGCATTATCGACCCGCTGACCCACCTGGTACGCAATAGCCTCGATCACGGTATTGAACTGCCAGAAAAACGGCTCGCCGCAGGTAAAAACAGCGTCGGAAATTTAATTCTGTCTGCCGAACATCAGGGCGGCAACATTTGCATTGAAGTGACCGACGATGGGGCGGGGCTAAACCGTGAGCGAATTCTGGCAAAAGCGGCCTCGCAAGGTTTGACTGTCAGCGAAAACATGAGCGACGACGAAGTCGCGATGCTGATATTTGCACCTGGCTTCTCCACGGCAGAGCAGGTCACCGACGTCTCCGGGCGCGGCGTCGGCATGGACGTCGTTAAACGTAATATCCAGAAGATGGGCGGTCATGTCGAAATCCAGTCGAAGCAGGGTACTGGCACTACGATCCGCATTTTACTGCCGCTGACGCTGGCCATCCTCGACGGCATGTCCGTACGCGTTGCGGATGAAGTTTTCATTCTGCCGCTGAATGCTGTTATGGAATCACTGCAACCCCGTGAAGCCGATCTCCATCCACTGGCCGGCGGCGAGCGGGTGCTGGAAGTGCGGGGTGAATATCTGCCCATCGTCGAACTGTGGAAAGTGTTCAACGTCGCGGGCGCGAAAACCGAAGCCACCCAGGGAATTGTGGTGATCTTACAAAGTGGCGGTCGCCGCTACGCCTTGCTGGTGGATCAATTAATTGGTCAACACCAGGTTGTGGTTAAAAACCTTGAAAGTAACTATCGCAAAGTCCCCGGCATTTCTGCTGCGACCATTCTTGGCGACGGCAGCGTGGCACTGATTGTTGATGTCTCCGCCTTGCAGGCGATAAACCGCGAACAACGTATGGCGAACACCGCCGCCTGA", + "dna_sequence_length": 1965, + "functions": [ + "fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein" + ], + "id": "CDS_1881", + "location": [ + [ + "NC_000913", + 1975324, + "-", + 1965 + ] + ], + "md5": "72c5adc0183a37dec947007aaba7a840", + "parent_gene": "", + "protein_md5": "7e252cfb7be1df82f119501d6e17a2a6", + "protein_translation": "MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA", + "protein_translation_length": 654, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006297" + ], + [ + "gene_synonym", + "ECK1890" + ], + [ + "gene_synonym", + "EcoGene:EG10602" + ], + [ + "gene_synonym", + "GI:16129841" + ], + [ + "gene_synonym", + "GeneID:946402" + ], + [ + "gene_synonym", + "JW1878" + ], + [ + "gene_synonym", + "NP_416403.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF06" + ], + [ + "gene_synonym", + "b1889" + ], + [ + "gene_synonym", + "flaJ" + ], + [ + "gene_synonym", + "motB" + ] + ], + "dna_sequence": "ATGAAGAATCAAGCGCATCCGATTATTGTCGTCAAACGACGCAAAGCCAAAAGCCACGGGGCAGCACATGGATCGTGGAAGATTGCTTATGCCGACTTTATGACTGCGATGATGGCCTTTTTTCTGGTGATGTGGCTGATCTCCATCTCCAGCCCAAAAGAGCTGATTCAGATTGCGGAGTACTTCCGGACTCCACTGGCGACTGCGGTTACGGGCGGCGATCGCATTTCTAATAGTGAAAGCCCAATTCCCGGCGGTGGTGATGATTACACCCAAAGCCAGGGGGAAGTGAATAAGCAGCCGAACATCGAAGAGCTGAAAAAACGCATGGAGCAAAGTCGATTGCGGAAATTGCGGGGTGATCTCGACCAGTTGATAGAGTCCGATCCGAAACTGCGGGCGTTACGTCCCCATCTCAAAATCGATCTGGTCCAGGAAGGTCTACGTATTCAGATCATCGATAGCCAGAATCGCCCGATGTTTAGAACCGGCAGTGCCGATGTCGAACCCTATATGCGCGACATTCTGCGCGCCATTGCGCCTGTACTGAACGGTATTCCCAACCGTATTAGCCTTTCAGGTCATACCGATGATTTCCCCTACGCCAGCGGTGAGAAAGGATATAGCAACTGGGAGCTTTCTGCCGATCGGGCCAATGCATCCCGCCGCGAACTGATGGTCGGAGGGTTGGATAGCGGCAAAGTGTTACGTGTCGTCGGCATGGCGGCAACGATGCGCTTAAGCGATCGCGGACCTGATGATGCCGTCAACCGTCGCATCAGCCTGCTGGTACTGAACAAACAAGCCGAACAGGCCATTTTGCATGAAAACGCCGAAAGCCAGAATGAGCCAGTAAGCGCCCTGGAAAAACCTGAGGTTGCACCACAGGTCAGTGTTCCCACAATGCCATCAGCCGAACCGAGGTGA", + "dna_sequence_length": 927, + "functions": [ + "protein that enables flagellar motor rotation" + ], + "id": "CDS_1882", + "location": [ + [ + "NC_000913", + 1976255, + "-", + 927 + ] + ], + "md5": "f456d2c84b6c49e19f8846156fad77ce", + "parent_gene": "", + "protein_md5": "10457d0c0a94dd8cb27f07f331deffdf", + "protein_translation": "MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVPTMPSAEPR", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006299" + ], + [ + "gene_synonym", + "ECK1891" + ], + [ + "gene_synonym", + "EcoGene:EG10601" + ], + [ + "gene_synonym", + "GI:16129842" + ], + [ + "gene_synonym", + "GeneID:947564" + ], + [ + "gene_synonym", + "JW1879" + ], + [ + "gene_synonym", + "NP_416404.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09348" + ], + [ + "gene_synonym", + "b1890" + ], + [ + "gene_synonym", + "flaJ" + ], + [ + "gene_synonym", + "motA" + ] + ], + "dna_sequence": "GTGCTTATCTTATTAGGTTACCTGGTTGTTCTCGGTACAGTTTTCGGCGGTTATTTGATGACCGGTGGAAGCCTTGGAGCACTCTATCAACCCGCTGAACTGGTGATTATTGCCGGTGCAGGGATTGGGTCGTTTATCGTCGGCAATAATGGCAAAGCGATTAAAGGCACGCTGAAGGCGCTGCCGTTGCTGTTTCGTCGCTCCAAATACACCAAAGCAATGTATATGGATCTGCTGGCTCTGCTTTATCGGTTGATGGCGAAATCGCGGCAGATGGGGATGTTTTCGCTGGAACGTGATATTGAAAATCCCCGTGAGAGCGAGATCTTCGCCAGCTACCCACGCATCCTCGCGGATAGCGTCATGCTTGATTTTATCGTCGATTATCTGCGCCTGATTATCAGCGGTCACATGAACACCTTCGAAATCGAAGCTCTGATGGATGAAGAGATTGAGACGCACGAAAGCGAGGCAGAAGTCCCGGCGAACAGTCTGGCGCTGGTCGGGGACTCACTTCCGGCGTTTGGTATTGTTGCGGCTGTAATGGGGGTCGTTCACGCGTTAGGTTCAGCCGATCGTCCTGCCGCCGAGCTGGGTGCGCTTATCGCACATGCGATGGTGGGGACTTTCCTCGGCATTTTATTGGCTTACGGATTTATTTCCCCATTAGCGACTGTTTTACGTCAGAAAAGCGCCGAAACCAGCAAAATGATGCAGTGCGTCAAAGTCACTCTGCTTTCTAATCTGAACGGTTACGCACCGCCTATCGCCGTTGAGTTTGGTCGCAAAACGCTCTATTCCAGCGAACGTCCGTCGTTTATTGAACTGGAAGAGCATGTGCGTGCGGTGAAAAATCCGCAACAACAGACGACAACCGAGGAAGCATGA", + "dna_sequence_length": 888, + "functions": [ + "proton conductor component of flagella motor" + ], + "id": "CDS_1883", + "location": [ + [ + "NC_000913", + 1977139, + "-", + 888 + ] + ], + "md5": "d037776c7ec7e94b6c51eee4951ff9ab", + "parent_gene": "", + "protein_md5": "7e6fbe02d7c51fe3800d8b7ecee169c6", + "protein_translation": "MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006301" + ], + [ + "gene_synonym", + "ECK1892" + ], + [ + "gene_synonym", + "EcoGene:EG10319" + ], + [ + "gene_synonym", + "GI:16129843" + ], + [ + "gene_synonym", + "GeneID:947280" + ], + [ + "gene_synonym", + "JW1880" + ], + [ + "gene_synonym", + "NP_416405.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABY7" + ], + [ + "gene_synonym", + "b1891" + ], + [ + "gene_synonym", + "flaI" + ], + [ + "gene_synonym", + "flhC" + ] + ], + "dna_sequence": "ATGAGTGAAAAAAGCATTGTTCAGGAAGCGCGGGATATTCAGCTGGCAATGGAATTGATCACCCTGGGCGCTCGTTTGCAGATGCTGGAAAGCGAAACACAGTTAAGTCGCGGACGCCTGATAAAACTTTATAAAGAACTGCGCGGAAGCCCACCGCCGAAAGGCATGCTGCCATTCTCAACCGACTGGTTTATGACCTGGGAACAAAACGTTCATGCTTCGATGTTCTGTAATGCATGGCAGTTTTTACTGAAAACCGGTTTGTGTAATGGCGTCGATGCGGTGATCAAAGCCTACCGTTTATACCTTGAACAGTGCCCACAAGCAGAAGAAGGACCACTGCTGGCATTAACCCGTGCCTGGACATTGGTGCGGTTTGTTGAAAGTGGATTACTGCAACTTTCCAGCTGCAACTGCTGCGGCGGCAATTTTATTACCCACGCTCACCAGCCTGTTGGCAGCTTTGCCTGCAGCTTATGTCAACCGCCATCCCGGGCAGTAAAAAGACGTAAACTTTCCCAGAATCCTGCCGATATTATCCCACAACTGCTGGATGAACAGAGAGTACAGGCTGTTTAA", + "dna_sequence_length": 579, + "functions": [ + "flagellar class II regulon transcriptional activator, with FlhD" + ], + "id": "CDS_1884", + "location": [ + [ + "NC_000913", + 1977844, + "-", + 579 + ] + ], + "md5": "88cc27b2fc9ac4e289f3b5cf1002e3a8", + "parent_gene": "", + "protein_md5": "b655b9e362d93c5fd3fada70d38c158f", + "protein_translation": "MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006303" + ], + [ + "gene_synonym", + "ECK1893" + ], + [ + "gene_synonym", + "EcoGene:EG10320" + ], + [ + "gene_synonym", + "GI:145698279" + ], + [ + "gene_synonym", + "GeneID:945442" + ], + [ + "gene_synonym", + "JW1881" + ], + [ + "gene_synonym", + "NP_416406.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8S9" + ], + [ + "gene_synonym", + "b1892" + ], + [ + "gene_synonym", + "flbB" + ], + [ + "gene_synonym", + "flhD" + ] + ], + "dna_sequence": "ATGCATACCTCCGAGTTGCTGAAACACATTTATGACATCAACTTGTCATATTTACTACTTGCACAGCGTTTGATTGTTCAGGACAAAGCGTCCGCTATGTTTCGTCTCGGCATAAATGAAGAAATGGCGACAACGTTAGCGGCACTGACTCTTCCGCAAATGGTTAAGCTGGCAGAAACCAATCAACTGGTTTGTCACTTCCGTTTTGACAGCCACCAGACGATTACTCAGTTGACGCAAGATTCCCGCGTTGACGATCTCCAGCAAATTCATACCGGCATCATGCTCTCAACACGCTTGCTGAATGATGTTAATCAGCCTGAAGAAGCGCTGCGCAAGAAAAGGGCCTGA", + "dna_sequence_length": 351, + "functions": [ + "flagellar class II regulon transcriptional activator, with FlhC" + ], + "id": "CDS_1885", + "location": [ + [ + "NC_000913", + 1978197, + "-", + 351 + ] + ], + "md5": "299d2e96e523782319df5b511d3d6d75", + "parent_gene": "", + "protein_md5": "7f806aa4d5cc9a3a755ef1ace640419b", + "protein_translation": "MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006308" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16129845" + ], + [ + "gene_synonym", + "GeneID:945867" + ], + [ + "gene_synonym", + "NP_416407.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF30" + ], + [ + "gene_synonym", + "b1893" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_1886", + "location": [ + [ + "NC_000913", + 1979021, + "-", + 504 + ] + ], + "md5": "9b3b0a523236fbbb94e9a150e2349e7c", + "parent_gene": "", + "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", + "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006311" + ], + [ + "gene_synonym", + "ECK4541" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16129846" + ], + [ + "gene_synonym", + "GeneID:945800" + ], + [ + "gene_synonym", + "NP_416408.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF13" + ], + [ + "gene_synonym", + "b1894" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_1887", + "location": [ + [ + "NC_000913", + 1979215, + "-", + 276 + ] + ], + "md5": "db0d756792984c1e534a2dad9bfdde5f", + "parent_gene": "", + "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006316" + ], + [ + "gene_synonym", + "ECK1894" + ], + [ + "gene_synonym", + "EcoGene:EG12862" + ], + [ + "gene_synonym", + "GI:16129847" + ], + [ + "gene_synonym", + "GeneID:946404" + ], + [ + "gene_synonym", + "JW1884" + ], + [ + "gene_synonym", + "NP_416409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46888" + ], + [ + "gene_synonym", + "b1895" + ], + [ + "gene_synonym", + "uspC" + ], + [ + "gene_synonym", + "yecG" + ] + ], + "dna_sequence": "ATGAGCTATAGCAATATTCTTGTCGCTGTTGCGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCGCGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAA", + "dna_sequence_length": 429, + "functions": [ + "universal stress protein" + ], + "id": "CDS_1888", + "location": [ + [ + "NC_000913", + 1979753, + "+", + 429 + ] + ], + "md5": "e9e64593c83dec8cb954cee037a7d9ee", + "parent_gene": "", + "protein_md5": "d3a6fcf02a643e458dc70faef1d65bcb", + "protein_translation": "MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSVMHEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHHFDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006318" + ], + [ + "gene_synonym", + "ECK1895" + ], + [ + "gene_synonym", + "EcoGene:EG11751" + ], + [ + "gene_synonym", + "GI:16129848" + ], + [ + "gene_synonym", + "GeneID:946405" + ], + [ + "gene_synonym", + "JW5312" + ], + [ + "gene_synonym", + "NP_416410.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31677" + ], + [ + "gene_synonym", + "b1896" + ], + [ + "gene_synonym", + "otsA" + ], + [ + "gene_synonym", + "pexA" + ] + ], + "dna_sequence": "ATGAGTCGTTTAGTCGTAGTATCTAACCGGATTGCACCACCAGACGAGCACGCCGCCAGTGCCGGTGGCCTTGCCGTTGGCATACTGGGGGCACTGAAAGCCGCAGGCGGACTGTGGTTTGGCTGGAGTGGTGAAACAGGGAATGAGGATCAGCCGCTAAAAAAGGTGAAAAAAGGTAACATTACGTGGGCCTCTTTTAACCTCAGCGAACAGGACCTTGACGAATACTACAACCAATTCTCCAATGCCGTTCTCTGGCCCGCTTTTCATTATCGGCTCGATCTGGTGCAATTTCAGCGTCCTGCCTGGGACGGCTATCTACGCGTAAATGCGTTGCTGGCAGATAAATTACTGCCGCTGTTGCAAGACGATGACATTATCTGGATCCACGATTATCACCTGTTGCCATTTGCGCATGAATTACGCAAACGGGGAGTGAATAATCGCATTGGTTTCTTTCTGCATATTCCTTTCCCGACACCGGAAATCTTCAACGCGCTGCCGACATATGACACCTTGCTTGAACAGCTTTGTGATTATGATTTGCTGGGTTTCCAGACAGAAAACGATCGTCTGGCGTTCCTGGATTGTCTTTCTAACCTGACCCGCGTCACGACACGTAGCGCAAAAAGCCATACAGCCTGGGGCAAAGCATTTCGAACAGAAGTCTACCCGATCGGCATTGAACCGAAAGAAATAGCCAAACAGGCTGCCGGGCCACTGCCGCCAAAACTGGCGCAACTTAAAGCGGAACTGAAAAACGTACAAAATATCTTTTCTGTCGAACGGCTGGATTATTCCAAAGGTTTGCCAGAGCGTTTTCTCGCCTATGAAGCGTTGCTGGAAAAATATCCGCAGCATCATGGTAAAATTCGTTATACCCAGATTGCACCAACGTCGCGTGGTGATGTGCAAGCCTATCAGGATATTCGTCATCAGCTCGAAAATGAAGCTGGACGAATTAATGGTAAATACGGGCAATTAGGCTGGACGCCGCTTTATTATTTGAATCAGCATTTTGACCGTAAATTACTGATGAAAATATTCCGCTACTCTGACGTGGGCTTAGTGACGCCACTGCGTGACGGGATGAACCTGGTAGCAAAAGAGTATGTTGCTGCTCAGGACCCAGCCAATCCGGGCGTTCTTGTTCTTTCGCAATTTGCGGGAGCGGCAAACGAGTTAACGTCGGCGTTAATTGTTAACCCCTACGATCGTGACGAAGTTGCAGCTGCGCTGGATCGTGCATTGACTATGTCGCTGGCGGAACGTATTTCCCGTCATGCAGAAATGCTGGACGTTATCGTGAAAAACGATATTAACCACTGGCAGGAGTGCTTCATTAGCGACCTAAAGCAGATAGTTCCGCGAAGCGCGGAAAGCCAGCAGCGCGATAAAGTTGCTACCTTTCCAAAGCTTGCGTAG", + "dna_sequence_length": 1425, + "functions": [ + "trehalose-6-phosphate synthase" + ], + "id": "CDS_1889", + "location": [ + [ + "NC_000913", + 1981612, + "-", + 1425 + ] + ], + "md5": "0dd42100eb22bdd762b31f3612f6a7ac", + "parent_gene": "", + "protein_md5": "1446729bec3da4ae5a0b090583def8a9", + "protein_translation": "MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQRDKVATFPKLA", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006320" + ], + [ + "gene_synonym", + "ECK1896" + ], + [ + "gene_synonym", + "EcoGene:EG11752" + ], + [ + "gene_synonym", + "GI:16129849" + ], + [ + "gene_synonym", + "GeneID:946406" + ], + [ + "gene_synonym", + "JW1886" + ], + [ + "gene_synonym", + "NP_416411.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31678" + ], + [ + "gene_synonym", + "b1897" + ], + [ + "gene_synonym", + "otsB" + ], + [ + "gene_synonym", + "otsP" + ] + ], + "dna_sequence": "GTGACAGAACCGTTAACCGAAACCCCTGAACTATCCGCGAAATATGCCTGGTTTTTTGATCTTGATGGAACGCTGGCGGAAATCAAACCGCATCCCGATCAGGTCGTCGTGCCTGACAATATTCTGCAAGGACTACAGCTACTGGCAACCGCAAGTGATGGTGCATTGGCATTGATATCAGGGCGCTCAATGGTGGAGCTTGACGCACTGGCAAAACCTTATCGCTTCCCGTTAGCGGGCGTGCATGGGGCGGAGCGCCGTGACATCAATGGTAAAACACATATCGTTCATCTGCCGGATGCGATTGCGCGTGATATTAGCGTGCAACTGCATACAGTCATCGCTCAGTATCCCGGCGCGGAGCTGGAGGCGAAAGGGATGGCTTTTGCGCTGCATTATCGTCAGGCTCCGCAGCATGAAGACGCATTAATGACATTAGCGCAACGTATTACTCAGATCTGGCCACAAATGGCGTTACAGCAGGGAAAGTGTGTTGTCGAGATCAAACCGAGAGGTACCAGTAAAGGTGAGGCAATTGCAGCTTTTATGCAGGAAGCTCCCTTTATCGGGCGAACGCCCGTATTTCTGGGCGATGATTTAACCGATGAATCTGGCTTCGCAGTCGTTAACCGACTGGGCGGAATGTCAGTAAAAATTGGCACAGGTGCAACTCAGGCATCATGGCGACTGGCGGGTGTGCCGGATGTCTGGAGCTGGCTTGAAATGATAACCACCGCATTACAACAAAAAAGAGAAAATAACAGGAGTGATGACTATGAGTCGTTTAGTCGTAGTATCTAA", + "dna_sequence_length": 801, + "functions": [ + "trehalose-6-phosphate phosphatase, biosynthetic" + ], + "id": "CDS_1890", + "location": [ + [ + "NC_000913", + 1982387, + "-", + 801 + ] + ], + "md5": "dd6d161c610fc7896bae87d6ec7c14da", + "parent_gene": "", + "protein_md5": "4bf053c6d3c6a5b199f01fbbcd42814e", + "protein_translation": "MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKIGTGATQASWRLAGVPDVWSWLEMITTALQQKRENNRSDDYESFSRSI", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174093" + ], + [ + "gene_synonym", + "ECK1897" + ], + [ + "gene_synonym", + "EcoGene:EG10059" + ], + [ + "gene_synonym", + "GI:145698280" + ], + [ + "gene_synonym", + "GeneID:948923" + ], + [ + "gene_synonym", + "JW1887" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE26" + ], + [ + "gene_synonym", + "YP_026162.2" + ], + [ + "gene_synonym", + "araH" + ], + [ + "gene_synonym", + "b4460" + ] + ], + "dna_sequence": "ATGTCTTCTGTTTCTACATCGGGGTCTGGCGCACCTAAGTCGTCATTCAGCTTCGGGCGTATCTGGGATCAGTACGGCATGCTGGTGGTGTTTGCGGTGCTCTTTATCGCCTGTGCCATTTTTGTCCCAAATTTTGCCACCTTCATTAATATGAAAGGGTTGGGCCTGGCAATTTCCATGTCGGGGATGGTGGCTTGTGGCATGTTGTTCTGCCTCGCTTCCGGTGACTTTGACCTTTCTGTCGCCTCCGTAATTGCCTGTGCGGGTGTCACCACGGCGGTGGTTATTAACCTGACTGAAAGCCTGTGGATTGGCGTGGCAGCGGGGTTGTTGCTGGGCGTTCTCTGTGGCCTGGTCAATGGCTTTGTTATCGCCAAACTGAAAATAAATGCTCTGATCACGACATTGGCAACGATGCAGATTGTTCGAGGTCTGGCGTACATCATTTCAGACGGTAAAGCGGTCGGTATCGAAGATGAAAGCTTCTTTGCCCTTGGTTACGCCAACTGGTTCGGTCTGCCTGCGCCAATCTGGCTCACCGTCGCGTGTCTGATTATCTTTGGTTTGCTGCTGAATAAAACCACCTTTGGTCGTAACACCCTGGCGATTGGCGGGAACGAAGAGGCCGCGCGTCTGGCGGGTGTACCGGTTGTTCGCACCAAAATTATTATCTTTGTTCTCTCAGGCCTGGTATCAGCGATAGCCGGAATTATTCTGGCTTCACGTATGACCAGTGGGCAGCCAATGACGTCGATTGGTTATGAGCTGATTGTTATCTCCGCCTGCGTTTTAGGTGGCGTTTCTCTGAAAGGTGGCATCGGAAAAATCTCATATGTGGTGGCGGGTATCTTAATTTTAGGCACCGTGGAAAACGCCATGAACCTGCTTAATATTTCTCCTTTCGCGCAGTACGTGGTTCGCGGCTTAATCCTGCTGGCAGCGGTGATCTTCGACCGTTACAAGCAAAAAGCGAAACGCACTGTCTGA", + "dna_sequence_length": 987, + "functions": [ + "L-arabinose ABC transporter permease" + ], + "id": "CDS_1891", + "location": [ + [ + "NC_000913", + 1983540, + "-", + 987 + ] + ], + "md5": "2b63bfb0cf2828c8c78e505fb6d1a52f", + "parent_gene": "", + "protein_md5": "c798b547d42ff4db2edd13f264dd2f64", + "protein_translation": "MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006328" + ], + [ + "gene_synonym", + "ECK1898" + ], + [ + "gene_synonym", + "EcoGene:EG10058" + ], + [ + "gene_synonym", + "GI:16129850" + ], + [ + "gene_synonym", + "GeneID:946408" + ], + [ + "gene_synonym", + "JW1888" + ], + [ + "gene_synonym", + "NP_416413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAF3" + ], + [ + "gene_synonym", + "araG" + ], + [ + "gene_synonym", + "b1900" + ] + ], + "dna_sequence": "ATGCAACAGTCTACCCCGTATCTCTCATTTCGCGGCATCGGTAAAACGTTTCCCGGCGTTAAGGCGCTGACGGATATTAGTTTTGACTGCTATGCCGGTCAGGTTCATGCGTTGATGGGTGAAAATGGCGCAGGAAAATCAACTCTCTTAAAAATCCTCAGCGGCAACTATGCGCCAACCACGGGTTCTGTAGTGATTAATGGGCAGGAAATGTCCTTTTCCGACACGACCGCAGCACTTAACGCGGGCGTGGCGATTATTTACCAGGAACTGCATCTCGTGCCGGAAATGACCGTCGCGGAAAACATCTATCTCGGCCAGCTGCCGCATAAAGGCGGCATTGTGAATCGCTCATTGCTGAATTATGAGGCGGGTTTACAACTTAAACATCTTGGTATGGATATTGACCCGGACACGCCGCTGAAATATCTCTCCATTGGTCAGTGGCAGATGGTTGAAATCGCCAAAGCGCTGGCGCGTAACGCCAAAATTATCGCCTTTGATGAGCCAACCAGCTCCCTCTCTGCCCGTGAAATCGACAATCTTTTCCGCGTTATTCGTGAACTGCGAAAAGAGGGGCGGGTAATCTTATACGTTTCTCACCGTATGGAAGAAATATTTGCCCTCAGCGATGCCATTACTGTCTTTAAAGATGGACGTTATGTCAAAACCTTTACCGATATGCAGCAGGTTGACCACGACGCGCTGGTGCAGGCGATGGTCGGGCGCGACATTGGCGATATCTACGGCTGGCAACCGCGTAGTTATGGCGAGGAGCGCCTACGTCTTGATGCTGTGAAAGCACCAGGCGTGCGTACGCCAATAAGTCTGGCGGTTCGCAGTGGTGAAATTGTTGGGCTGTTTGGTCTGGTAGGGGCGGGGCGTAGCGAATTAATGAAAGGCATGTTTGGCGGGACGCAAATCACCGCCGGTCAGGTTTATATCGACCAACAGCCGATCGATATTCGTAAACCGAGCCACGCCATTGCCGCAGGCATGATGCTCTGCCCGGAAGATCGCAAAGCGGAAGGCATTATTCCCGTGCACTCCGTTCGCGACAATATCAACATCAGTGCCAGACGTAAACATGTGCTCGGCGGTTGTGTAATCAACAACGGTTGGGAAGAAAACAATGCCGATCACCACATTCGTTCGCTCAACATCAAAACGCCGGGCGCGGAGCAACTGATCATGAATCTCTCAGGCGGAAATCAGCAAAAAGCCATTCTGGGCCGCTGGTTATCGGAAGAGATGAAGGTCATTTTGCTGGATGAACCTACGCGCGGCATTGATGTTGGCGCTAAGCACGAAATATATAACGTAATTTATGCGCTGGCGGCGCAGGGCGTGGCGGTGCTGTTTGCCTCCAGCGACTTACCTGAAGTCCTCGGCGTTGCCGACCGGATTGTGGTGATGCGGGAAGGTGAAATCGCCGGTGAATTGTTACACGAGCAGGCAGATGAGCGTCAGGCACTGAGCCTTGCGATGCCTAAAGTCAGCCAGGCTGTTGCCTGA", + "dna_sequence_length": 1515, + "functions": [ + "L-arabinose ABC transporter ATPase" + ], + "id": "CDS_1892", + "location": [ + [ + "NC_000913", + 1985069, + "-", + 1515 + ] + ], + "md5": "83d990448f71b1bcce1fa382312469a2", + "parent_gene": "", + "protein_md5": "b70200264eed42e487d381444d3b9911", + "protein_translation": "MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA", + "protein_translation_length": 504, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006330" + ], + [ + "gene_synonym", + "ECK1899" + ], + [ + "gene_synonym", + "EcoGene:EG10057" + ], + [ + "gene_synonym", + "GI:16129851" + ], + [ + "gene_synonym", + "GeneID:946409" + ], + [ + "gene_synonym", + "JW1889" + ], + [ + "gene_synonym", + "NP_416414.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02924" + ], + [ + "gene_synonym", + "araF" + ], + [ + "gene_synonym", + "b1901" + ] + ], + "dna_sequence": "ATGCACAAATTTACTAAAGCCCTGGCAGCCATTGGTCTGGCAGCCGTTATGTCACAATCCGCTATGGCGGAGAACCTGAAGCTCGGTTTTCTGGTGAAGCAACCGGAAGAGCCGTGGTTCCAGACCGAATGGAAGTTTGCCGATAAAGCCGGGAAGGATTTAGGGTTTGAGGTTATTAAGATTGCCGTGCCGGATGGCGAAAAAACATTGAACGCGATCGACAGCCTGGCTGCCAGTGGCGCAAAAGGTTTCGTTATTTGTACTCCGGACCCCAAACTCGGCTCTGCCATCGTCGCGAAAGCGCGTGGCTACGATATGAAAGTCATTGCCGTGGATGACCAGTTTGTTAACGCCAAAGGTAAGCCAATGGATACCGTTCCGCTGGTGATGATGGCGGCGACTAAAATTGGCGAACGTCAGGGCCAGGAACTGTATAAAGAGATGCAGAAACGTGGCTGGGATGTCAAAGAAAGCGCGGTGATGGCGATTACCGCCAACGAACTGGATACCGCCCGCCGCCGTACTACGGGATCTATGGATGCGCTGAAAGCGGCCGGATTCCCGGAAAAACAAATTTATCAGGTACCTACCAAATCTAACGACATCCCGGGGGCATTTGACGCTGCCAACTCAATGCTGGTTCAACATCCGGAAGTTAAACATTGGCTGATCGTCGGTATGAACGACAGCACCGTGCTGGGCGGCGTACGCGCGACGGAAGGTCAGGGCTTTAAAGCGGCCGATATCATCGGCATTGGCATTAACGGTGTGGATGCGGTGAGCGAACTGTCTAAAGCACAGGCAACCGGCTTCTACGGTTCCCTGCTGCCAAGCCCGGACGTACATGGCTATAAATCCAGCGAAATGCTTTACAACTGGGTAGCAAAAGACGTTGAACCGCCAAAATTTACCGAAGTTACCGACGTGGTACTGATCACGCGTGACAACTTTAAAGAAGAACTGGAGAAAAAAGGTTTAGGCGGTAAGTAA", + "dna_sequence_length": 990, + "functions": [ + "L-arabinose ABC transporter periplasmic binding protein" + ], + "id": "CDS_1893", + "location": [ + [ + "NC_000913", + 1986128, + "-", + 990 + ] + ], + "md5": "172125c2d02b068ec2a37d52f75f204e", + "parent_gene": "", + "protein_md5": "a364105b35b80beaabd67a384340fbc1", + "protein_translation": "MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006333" + ], + [ + "gene_synonym", + "ECK1900" + ], + [ + "gene_synonym", + "EcoGene:EG13175" + ], + [ + "gene_synonym", + "GI:16129852" + ], + [ + "gene_synonym", + "GeneID:946407" + ], + [ + "gene_synonym", + "JW1890" + ], + [ + "gene_synonym", + "NP_416415.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9A2" + ], + [ + "gene_synonym", + "b1902" + ], + [ + "gene_synonym", + "ftnB" + ], + [ + "gene_synonym", + "yecI" + ] + ], + "dna_sequence": "ATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACCGCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGTTAGCCGATGAAGCGAAAGAACTGAATGATGATTCAACCGTCAATTTCCTGCGCGATCTGGAAAAAGAACAGCAGCATGATGGTCTGTTGCTGCAAACCATTCTTGATGAAGTGCGCAGTGCGAAACTTGCGGGTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGA", + "dna_sequence_length": 504, + "functions": [ + "ferritin B, putative ferrous iron reservoir" + ], + "id": "CDS_1894", + "location": [ + [ + "NC_000913", + 1986925, + "+", + 504 + ] + ], + "md5": "efa38e2885f454dd6c24307130e270c6", + "parent_gene": "", + "protein_md5": "60dc0244e61b9d9d23b4a68998386248", + "protein_translation": "MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285058" + ], + [ + "gene_synonym", + "ECK1901" + ], + [ + "gene_synonym", + "EcoGene:EG13242" + ], + [ + "gene_synonym", + "GI:94541093" + ], + [ + "gene_synonym", + "GeneID:946388" + ], + [ + "gene_synonym", + "JW1891" + ], + [ + "gene_synonym", + "NP_416416.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD10" + ], + [ + "gene_synonym", + "b4537" + ], + [ + "gene_synonym", + "yecJ" + ] + ], + "dna_sequence": "ATGTCCCAGCCGCTGAATGCCGATCAGGAATTGGTTTCTGATGTGGTTGCTTGCCAGTTGGTTATCAAACAAATTCTGGATGTTCTCGATGTAATCGCGCCCGTTGAAGTTCGTGAAAAAATGTCCAGTCAGCTGAAGAATATCGACTTTACTAACCATCCCGCCGCCGCAGACCCGGTCACCATGCGGGCAATCCAAAAAGCCATCGCGCTTATTGAACTCAAGTTTACCCCACAGGGTGAATCCCATTAA", + "dna_sequence_length": 252, + "functions": [ + "DUF2766 family protein" + ], + "id": "CDS_1895", + "location": [ + [ + "NC_000913", + 1987758, + "-", + 252 + ] + ], + "md5": "86104feedb62e67378b60e3a6a0cd98f", + "parent_gene": "", + "protein_md5": "96c5f61e193689d16bb38315cf420562", + "protein_translation": "MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGESH", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4478" + ], + [ + "gene_synonym", + "EcoGene:EG14468" + ], + [ + "gene_synonym", + "GI:226524726" + ], + [ + "gene_synonym", + "GeneID:7751642" + ], + [ + "gene_synonym", + "IS092" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P605" + ], + [ + "gene_synonym", + "YP_002791245.1" + ], + [ + "gene_synonym", + "azuC" + ], + [ + "gene_synonym", + "b4663" + ], + [ + "gene_synonym", + "isrB" + ] + ], + "dna_sequence": "ATGAAACTGCGCAAAATCCTGAAAAGTATGTTCAATAACTATTGCAAGACGTTCAAAGACGTACCGCCAGGCAATATGTTCCGATAA", + "dna_sequence_length": 87, + "functions": [ + "acid-inducible small membrane-associated protein" + ], + "id": "CDS_1896", + "location": [ + [ + "NC_000913", + 1987959, + "-", + 87 + ] + ], + "md5": "4434594075e117ca0ccf76bc146f046f", + "parent_gene": "", + "protein_md5": "329b7d525e411c37cfe6b4fa02d6e4e2", + "protein_translation": "MKLRKILKSMFNNYCKTFKDVPPGNMFR", + "protein_translation_length": 28, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006338" + ], + [ + "gene_synonym", + "ECK1903" + ], + [ + "gene_synonym", + "EcoGene:EG14036" + ], + [ + "gene_synonym", + "GI:16129854" + ], + [ + "gene_synonym", + "GeneID:946386" + ], + [ + "gene_synonym", + "JW1892" + ], + [ + "gene_synonym", + "NP_416417.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76308" + ], + [ + "gene_synonym", + "b1904" + ], + [ + "gene_synonym", + "yecR" + ] + ], + "dna_sequence": "ATGAGACTTCTGATTCTGACTCTTTCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTGGTCAGCCAGTAGGCAACTGTAGCCTTTTTGCGGGTTCCTTATGTTTGAATACGGAATTCACTTTGTCATATCAGTGCCATCATTCCGCCTTCCCTGTCTTTCTCTAA", + "dna_sequence_length": 324, + "functions": [ + "lipoprotein, function unknown" + ], + "id": "CDS_1897", + "location": [ + [ + "NC_000913", + 1988222, + "+", + 324 + ] + ], + "md5": "c3774d22f23d99f0c53ee4df4eb00967", + "parent_gene": "", + "protein_md5": "e4170bdce39f0873f7e331f8d1d69741", + "protein_translation": "MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006342" + ], + [ + "gene_synonym", + "ECK1904" + ], + [ + "gene_synonym", + "EcoGene:EG10921" + ], + [ + "gene_synonym", + "GI:16129855" + ], + [ + "gene_synonym", + "GeneID:946410" + ], + [ + "gene_synonym", + "JW1893" + ], + [ + "gene_synonym", + "NP_416418.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A998" + ], + [ + "gene_synonym", + "b1905" + ], + [ + "gene_synonym", + "ftn" + ], + [ + "gene_synonym", + "ftnA" + ], + [ + "gene_synonym", + "gen-165" + ], + [ + "gene_synonym", + "rsgA" + ] + ], + "dna_sequence": "ATGCTGAAACCAGAAATGATTGAAAAACTTAATGAGCAGATGAACCTGGAACTGTACTCTTCACTGCTTTATCAGCAAATGAGCGCCTGGTGCAGCTATCATACCTTCGAAGGTGCTGCCGCGTTCCTGCGCCGTCACGCCCAGGAAGAGATGACGCATATGCAGCGTCTGTTTGATTACCTGACTGATACCGGCAATTTACCGCGTATTAATACCGTTGAATCTCCGTTTGCTGAATATTCCTCACTTGATGAATTATTCCAGGAAACCTATAAACACGAACAATTAATCACCCAGAAAATTAACGAACTGGCTCATGCTGCAATGACCAATCAGGACTACCCAACATTTAATTTCCTGCAATGGTATGTTTCTGAGCAGCATGAAGAAGAGAAACTGTTCAAATCGATTATTGATAAATTAAGCCTGGCAGGCAAAAGCGGCGAAGGTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAA", + "dna_sequence_length": 498, + "functions": [ + "ferritin iron storage protein (cytoplasmic)" + ], + "id": "CDS_1898", + "location": [ + [ + "NC_000913", + 1988716, + "+", + 498 + ] + ], + "md5": "7f9689b76315cd826a8521dd444e5f11", + "parent_gene": "", + "protein_md5": "f280d9f948d7fad2e551a8eb6e58ff3f", + "protein_translation": "MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006344" + ], + [ + "gene_synonym", + "ECK1905" + ], + [ + "gene_synonym", + "EcoGene:EG12863" + ], + [ + "gene_synonym", + "GI:16129856" + ], + [ + "gene_synonym", + "GeneID:946411" + ], + [ + "gene_synonym", + "JW1894" + ], + [ + "gene_synonym", + "NP_416419.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46887" + ], + [ + "gene_synonym", + "b1906" + ], + [ + "gene_synonym", + "yecH" + ] + ], + "dna_sequence": "ATGGACTCTATTCACGGTCATGAAGTGTTAAATATGATGATTGAATCAGGCGAGCAATATACGCATGCCAGTCTGGAAGCTGCGATTAAAGCGCGTTTTGGTGAACAGGCACGTTTTCACACCTGCTCGGCAGAAGGGATGACAGCGGGAGAGCTGGTAGCGTTTCTGGCAGCAAAAGGCAAATTTATACCTTCGAAAGACGGTTTTTCGACCGATCAGAGTAAGATTTGCCGTCACTGA", + "dna_sequence_length": 240, + "functions": [ + "DUF2492 family protein" + ], + "id": "CDS_1899", + "location": [ + [ + "NC_000913", + 1989490, + "-", + 240 + ] + ], + "md5": "204b153881d43eeda19dd7c9e7a56caa", + "parent_gene": "", + "protein_md5": "0ca31361ad5abd23b7ccc7dfed48a278", + "protein_translation": "MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006355" + ], + [ + "gene_synonym", + "ECK1906" + ], + [ + "gene_synonym", + "EcoGene:EG11041" + ], + [ + "gene_synonym", + "GI:16129857" + ], + [ + "gene_synonym", + "GeneID:946412" + ], + [ + "gene_synonym", + "JW1895" + ], + [ + "gene_synonym", + "NP_416420.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAD4" + ], + [ + "gene_synonym", + "b1907" + ], + [ + "gene_synonym", + "tyrP" + ] + ], + "dna_sequence": "GTGAAAAACAGAACCCTGGGAAGTGTTTTTATCGTGGCGGGAACCACAATTGGCGCAGGCATGCTGGCAATGCCGCTGGCTGCGGCCGGTGTTGGTTTTAGCGTTACGTTAATCTTGTTGATTGGGCTTTGGGCGTTGATGTGCTACACGGCGCTATTACTGCTGGAGGTGTACCAGCATGTTCCGGCAGATACCGGTCTGGGCACGCTGGCAAAACGCTATCTGGGACGCTACGGTCAATGGCTGACGGGCTTCAGTATGATGTTCTTAATGTATGCTCTGACTGCGGCATACATCAGCGGTGCCGGTGAATTGTTGGCCTCCAGCATCAGCGACTGGACAGGTATTTCTATGTCGGCAACCGCTGGCGTGCTGTTGTTCACTTTTGTTGCCGGTGGCGTGGTTTGTGTCGGAACTTCACTGGTCGATTTATTTAACCGTTTTCTGTTCAGCGCCAAGATTATTTTTCTGGTGGTAATGCTGGTACTACTGCTGCCGCATATTCACAAAGTGAATCTTTTAACCCTGCCGTTGCAACAGGGGCTGGCTCTGTCTGCAATCCCGGTGATTTTTACGTCGTTTGGTTTTCACGGTAGCGTGCCGAGTATTGTCAGCTATATGGATGGCAACATTCGTAAGCTACGCTGGGTGTTTATAATCGGTAGTGCGATCCCCCTGGTGGCATATATTTTCTGGCAGGTGGCGACGCTTGGCAGCATTGATTCAACAACCTTTATGGGATTGCTGGCTAATCATGCTGGATTAAACGGGCTGTTACAGGCGTTACGCGAAATGGTGGCCTCTCCGCATGTTGAGCTGGCAGTGCATTTATTTGCTGATTTAGCCCTCGCCACGTCATTTCTCGGCGTTGCGTTAGGCTTATTTGATTATCTGGCTGATTTATTTCAGCGTTCAAATACCGTTGGTGGACGGTTGCAAACTGGTGCAATTACGTTTCTGCCGCCGTTGGCGTTTGCACTGTTTTATCCACGAGGATTTGTGATGGCGCTGGGTTACGCCGGTGTGGCGCTGGCGGTACTGGCATTGATTATCCCTTCGCTGTTGACCTGGCAAAGCAGAAAGCACAATCCTCAGGCGGGTTACCGGGTCAAAGGTGGTCGTCCGGCGCTGGTGGTGGTGTTTCTCTGTGGTATTGCTGTGATTGGCGTGCAATTTTTGATTGCGGCAGGGTTGTTACCAGAAGTGGGGTGA", + "dna_sequence_length": 1212, + "functions": [ + "tyrosine transporter" + ], + "id": "CDS_1900", + "location": [ + [ + "NC_000913", + 1989681, + "+", + 1212 + ] + ], + "md5": "1cce200bd32648af9053d75891aac767", + "parent_gene": "", + "protein_md5": "f19ea6cefcba867472809fabf1ba91e2", + "protein_translation": "MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006357" + ], + [ + "gene_synonym", + "ECK1907" + ], + [ + "gene_synonym", + "EcoGene:EG11139" + ], + [ + "gene_synonym", + "GI:16129858" + ], + [ + "gene_synonym", + "GeneID:945061" + ], + [ + "gene_synonym", + "JW1896" + ], + [ + "gene_synonym", + "NP_416421.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD05" + ], + [ + "gene_synonym", + "b1908" + ], + [ + "gene_synonym", + "yecA" + ] + ], + "dna_sequence": "ATGAAAACGGGACCGTTAAACGAAAGTGAGTTGGAATGGCTGGACGATATTCTGACCAAATACAACACTGACCACGCCATCCTTGATGTGGCGGAGCTGGACGGTTTATTGACGGCGGTGTTGAGTTCTCCGCAAGAGATTGAACCGGAACAGTGGCTGGTTGCCGTGTGGGGTGGGGCTGACTATGTGCCGCGCTGGGCGTCAGAGAAAGAGATGACGCGCTTTATGAATCTGGCTTTTCAACATATGGCCGATACCGCAGAGCGTCTGAACGAATTCCCGGAGCAGTTTGAGCCGTTATTCGGCTTGCGAGAAGTTGATGGCAGCGAGCTGACGATTGTTGAGGAGTGGTGCTTTGGCTATATGCGGGGCGTGGCACTTTCTGACTGGTCAACGTTGCCCGATTCGTTAAAACCAGCGCTGGAGGCGATTGCGCTGCACGGTACTGAGGAAAACTTCGAGCGGGTAGAAAAGATGTCGCCAGAAGCGTTTGAAGAGAGCGTAGATGCCATTCGACTGGCGGCGCTTGATCTACATGCGTACTGGATGGCGCATCCGCAGGAAAAAGCTGTTCAGCAACCGATCAAAGCAGAAGAGAAACCGGGGCGTAACGATCCTTGCCCGTGCGGTAGTGGTAAGAAATTTAAGCAGTGCTGCCTGCATTAA", + "dna_sequence_length": 666, + "functions": [ + "UPF0149 family protein" + ], + "id": "CDS_1901", + "location": [ + [ + "NC_000913", + 1991619, + "-", + 666 + ] + ], + "md5": "cc8106df8772af6303d19a3fa1563aef", + "parent_gene": "", + "protein_md5": "a38b9965bdc0525b9a572b970b1188ea", + "protein_translation": "MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006367" + ], + [ + "gene_synonym", + "ECK1911" + ], + [ + "gene_synonym", + "EcoGene:EG10706" + ], + [ + "gene_synonym", + "GI:16129859" + ], + [ + "gene_synonym", + "GeneID:945791" + ], + [ + "gene_synonym", + "JW1897" + ], + [ + "gene_synonym", + "NP_416422.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABF8" + ], + [ + "gene_synonym", + "b1912" + ], + [ + "gene_synonym", + "pgsA" + ] + ], + "dna_sequence": "ATGCAATTTAATATCCCTACGTTGCTTACACTGTTCCGTGTCATCCTTATCCCATTCTTTGTATTGGTCTTTTATCTGCCTGTCACCTGGTCGCCGTTTGCCGCCGCGCTCATTTTCTGCGTCGCGGCGGTGACTGACTGGTTCGATGGTTTTCTGGCACGCCGCTGGAACCAGAGTACCCGGTTTGGTGCTTTCCTTGACCCTGTGGCAGATAAAGTTCTCGTGGCTATCGCCATGGTGCTGGTAACCGAGCATTATCACAGCTGGTGGGTGACATTACCGGCGGCAACGATGATCGCCCGTGAAATTATTATTTCTGCGCTACGCGAATGGATGGCGGAGTTGGGTAAACGCAGTAGCGTGGCCGTCTCCTGGATTGGGAAAGTGAAAACCACTGCCCAGATGGTGGCGTTGGCATGGCTGCTGTGGCGTCCGAACATTTGGGTTGAGTACGCCGGTATTGCACTTTTCTTTGTGGCTGCGGTACTGACTCTGTGGTCAATGTTGCAATATTTGAGCGCTGCGCGTGCAGATTTGCTTGATCAGTGA", + "dna_sequence_length": 549, + "functions": [ + "phosphatidylglycerophosphate synthetase" + ], + "id": "CDS_1902", + "location": [ + [ + "NC_000913", + 1992817, + "-", + 549 + ] + ], + "md5": "e7feb15592fba2d30768e64f1efca418", + "parent_gene": "", + "protein_md5": "a52a7859fbfd934bc77137489798d420", + "protein_translation": "MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLLDQ", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006370" + ], + [ + "gene_synonym", + "ECK1912" + ], + [ + "gene_synonym", + "EcoGene:EG11063" + ], + [ + "gene_synonym", + "GI:90111354" + ], + [ + "gene_synonym", + "GeneID:947203" + ], + [ + "gene_synonym", + "JW1898" + ], + [ + "gene_synonym", + "NP_416423.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8G0" + ], + [ + "gene_synonym", + "b1913" + ], + [ + "gene_synonym", + "uvrC" + ] + ], + "dna_sequence": "GTGAGTGATCAGTTTGACGCAAAAGCGTTTTTAAAAACCGTAACCAGCCAGCCAGGCGTTTATCGCATGTACGATGCTGGTGGTACGGTTATCTATGTCGGCAAAGCGAAAGACCTGAAAAAACGGCTTTCCAGCTATTTCCGTAGCAACCTCGCTTCGCGCAAAACCGAAGCGCTGGTCGCCCAGATCCAGCAAATTGATGTAACGGTTACTCACACAGAAACCGAAGCGCTGTTGCTGGAACACAACTACATCAAACTCTATCAGCCGCGTTACAACGTTTTGCTACGCGATGATAAATCATATCCTTTTATCTTCCTGAGTGGTGATACCCACCCGCGTCTGGCGATGCATCGTGGTGCGAAGCATGCCAAAGGTGAATATTTCGGCCCGTTCCCGAATGGCTATGCCGTACGTGAAACACTGGCGCTACTGCAAAAGATTTTCCCCATTCGCCAGTGCGAAAATAGTGTTTATCGCAATCGCTCGCGTCCGTGTCTGCAATACCAGATAGGGCGCTGTCTGGGACCGTGCGTTGAAGGACTGGTGAGTGAAGAAGAATACGCTCAGCAGGTCGAGTATGTGCGCCTGTTTTTGTCTGGCAAAGATGATCAGGTGCTTACGCAACTCATTAGTCGTATGGAAACTGCCAGCCAGAATCTGGAGTTTGAAGAAGCTGCACGTATTCGCGACCAAATTCAGGCGGTGCGACGCGTCACCGAAAAACAATTCGTTTCCAATACCGGCGACGACCTCGACGTTATTGGTGTGGCGTTCGATGCGGGCATGGCTTGTGTCCACGTATTGTTCATTCGTCAGGGCAAAGTGCTCGGCAGCCGCAGCTATTTCCCGAAAGTGCCTGGCGGTACGGAACTGAGCGAGGTGGTAGAAACCTTCGTAGGCCAGTTCTATTTACAAGGCAGCCAGATGCGCACCTTACCGGGTGAGATCCTGCTCGATTTTAATCTTAGCGATAAAACGCTGCTCGCCGATTCCCTTTCAGAACTGGCGGGACGCAAGATTAATGTTCAAACCAAACCTCGCGGCGATAGGGCGCGTTATCTGAAACTCGCGCGCACCAATGCGGCGACGGCCTTAACCAGCAAACTTTCGCAGCAATCTACCGTTCACCAGCGACTGACCGCGCTTGCCAGCGTGTTGAAATTGCCGGAAGTGAAGCGGATGGAGTGCTTTGACATCAGCCATACCATGGGCGAACAAACCGTCGCTTCCTGTGTGGTGTTTGATGCTAACGGCCCGCTGCGTGCGGAGTATCGGCGCTATAACATTACAGGCATCACGCCGGGCGATGATTATGCGGCGATGAATCAGGTGCTGCGTCGGCGTTATGGTAAAGCCATTGACGACAGTAAGATCCCGGATGTGATCCTTATCGACGGCGGCAAAGGCCAGCTTGCGCAGGCGAAAAATGTCTTCGCCGAACTGGATGTCTCATGGGATAAAAATCATCCGCTGCTACTTGGCGTTGCCAAAGGAGCAGATCGTAAGGCTGGACTGGAAACGCTGTTCTTTGAGCCGGAAGGTGAGGGATTTAGTTTGCCGCCAGATTCACCCGCGCTGCATGTTATCCAGCATATTCGCGATGAATCACATGATCACGCGATTGGCGGGCACCGTAAAAAACGGGCGAAGGTCAAAAATACCAGTTCCCTGGAAACCATTGAAGGCGTCGGGCCAAAACGTCGGCAAATGTTGTTGAAATATATGGGCGGTTTGCAAGGTTTACGTAACGCCAGCGTCGAGGAAATTGCAAAAGTGCCGGGTATTTCGCAAGGTCTGGCAGAAAAGATCTTCTGGTCGTTGAAACATTGA", + "dna_sequence_length": 1833, + "functions": [ + "excinuclease UvrABC, endonuclease subunit" + ], + "id": "CDS_1903", + "location": [ + [ + "NC_000913", + 1994706, + "-", + 1833 + ] + ], + "md5": "9cbb78ec0a36a3b37c16b1ea746a9357", + "parent_gene": "", + "protein_md5": "b5022b72835d144a9deedecb710853d5", + "protein_translation": "MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH", + "protein_translation_length": 610, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006373" + ], + [ + "gene_synonym", + "ECK1913" + ], + [ + "gene_synonym", + "EcoGene:EG11140" + ], + [ + "gene_synonym", + "GI:16129861" + ], + [ + "gene_synonym", + "GeneID:946424" + ], + [ + "gene_synonym", + "JW1899" + ], + [ + "gene_synonym", + "NP_416424.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AED5" + ], + [ + "gene_synonym", + "b1914" + ], + [ + "gene_synonym", + "gacA" + ], + [ + "gene_synonym", + "sirA" + ], + [ + "gene_synonym", + "uvrY" + ], + [ + "gene_synonym", + "yecB" + ] + ], + "dna_sequence": "TTGATCAACGTTCTACTTGTTGATGACCACGAACTGGTGCGCGCAGGGATACGACGCATTCTGGAAGATATAAAGGGTATAAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGCCGGACAAATGCCGTTGACGTGGTGCTAATGGACATGAGTATGCCGGGCATTGGCGGTCTTGAGGCGACGCGTAAAATCGCGCGTTCCACAGCTGATGTCAAAATCATCATGCTTACCGTCCATACAGAAAACCCTTTACCAGCGAAAGTCATGCAGGCCGGTGCTGCGGGCTACCTCAGCAAAGGCGCGGCTCCGCAGGAAGTCGTGAGTGCGATTCGTTCTGTCTATTCAGGGCAGCGTTACATTGCTTCTGACATCGCTCAACAAATGGCGTTAAGCCAGATCGAACCAGAAAAAACAGAAAGCCCATTTGCCAGTTTGTCTGAACGTGAATTGCAGATTATGCTGATGATCACCAAGGGCCAGAAGGTCAATGAGATCTCAGAACAGCTCAATCTCAGTCCGAAAACGGTGAACAGCTACCGCTATCGTATGTTCAGTAAACTAAACATTCATGGCGATGTTGAGCTGACTCACCTGGCAATTCGCCATGGTCTGTGTAATGCGGAGACATTATCAAGTCAGTGA", + "dna_sequence_length": 657, + "functions": [ + "response regulator in two-component regulatory system with BarA" + ], + "id": "CDS_1904", + "location": [ + [ + "NC_000913", + 1995359, + "-", + 657 + ] + ], + "md5": "523106f0f24232c7d03499bfac2164e0", + "parent_gene": "", + "protein_md5": "4419228249595b504902b9c906a66263", + "protein_translation": "MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006379" + ], + [ + "gene_synonym", + "ECK1914" + ], + [ + "gene_synonym", + "EcoGene:EG12861" + ], + [ + "gene_synonym", + "GI:16129862" + ], + [ + "gene_synonym", + "GeneID:946420" + ], + [ + "gene_synonym", + "JW1900" + ], + [ + "gene_synonym", + "NP_416425.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD07" + ], + [ + "gene_synonym", + "b1915" + ], + [ + "gene_synonym", + "yecF" + ] + ], + "dna_sequence": "ATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAATGAAGTCTCCTGCCTGAAAGCGATGCTGACGCTGATGCTGCAGGCGATGGGACAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAA", + "dna_sequence_length": 225, + "functions": [ + "DUF2594 family protein" + ], + "id": "CDS_1905", + "location": [ + [ + "NC_000913", + 1995818, + "+", + 225 + ] + ], + "md5": "52b8a6689d1481b40b4d2fe013d10fa5", + "parent_gene": "", + "protein_md5": "33fb3d053aad10fe4b94b1aac17a4bd1", + "protein_translation": "MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLKMEKQLALIEDETQAAVFSKTVKQIKQAYRQ", + "protein_translation_length": 74, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006381" + ], + [ + "gene_synonym", + "ECK1915" + ], + [ + "gene_synonym", + "EcoGene:EG10935" + ], + [ + "gene_synonym", + "GI:16129863" + ], + [ + "gene_synonym", + "GeneID:946421" + ], + [ + "gene_synonym", + "JW1901" + ], + [ + "gene_synonym", + "NP_416426.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07026" + ], + [ + "gene_synonym", + "b1916" + ], + [ + "gene_synonym", + "sdiA" + ], + [ + "gene_synonym", + "uvrX" + ] + ], + "dna_sequence": "ATGCAGGATAAGGATTTTTTCAGCTGGCGTCGCACGATGCTGTTGCGTTTTCAGAGGATGGAGACCGCAGAAGAGGTCTACCATGAAATTGAGCTTCAGGCTCAGCAGCTGGAGTACGATTACTATTCGTTATGTGTCCGCCACCCGGTACCATTCACTCGACCTAAAGTGGCTTTTTACACCAATTACCCTGAGGCGTGGGTTAGTTATTATCAGGCAAAAAACTTTCTCGCAATTGATCCGGTGCTGAACCCTGAAAACTTTAGTCAGGGCCATTTAATGTGGAATGATGACTTATTCAGCGAAGCACAGCCGTTATGGGAAGCCGCGCGCGCACATGGTTTACGCCGCGGTGTCACTCAGTATTTAATGCTGCCAAACCGGGCGCTGGGCTTTTTGTCCTTTTCCCGTTGCAGCGCGCGCGAAATACCCATTCTTAGTGATGAACTGCAATTAAAAATGCAGTTACTGGTGCGCGAAAGTCTGATGGCTCTGATGCGTTTAAATGATGAAATAGTGATGACGCCAGAGATGAATTTCAGCAAGCGCGAAAAAGAAATTCTGAGGTGGACGGCGGAAGGGAAAACATCAGCAGAGATAGCGATGATTTTGTCAATCTCTGAGAATACGGTCAATTTCCACCAGAAAAACATGCAGAAAAAAATTAATGCACCAAATAAGACCCAGGTTGCCTGTTACGCGGCCGCTACTGGCTTAATTTGA", + "dna_sequence_length": 723, + "functions": [ + "quorum-sensing transcriptional activator" + ], + "id": "CDS_1906", + "location": [ + [ + "NC_000913", + 1996832, + "-", + 723 + ] + ], + "md5": "c9bebefb66c32e46bb4bca7a0cd693c9", + "parent_gene": "", + "protein_md5": "a531d470212bfc47b81c8744bcc1a2b0", + "protein_translation": "MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006384" + ], + [ + "gene_synonym", + "ECK1916" + ], + [ + "gene_synonym", + "EcoGene:EG12347" + ], + [ + "gene_synonym", + "GI:16129864" + ], + [ + "gene_synonym", + "GeneID:946422" + ], + [ + "gene_synonym", + "JW1902" + ], + [ + "gene_synonym", + "NP_416427.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37774" + ], + [ + "gene_synonym", + "b1917" + ], + [ + "gene_synonym", + "yecC" + ] + ], + "dna_sequence": "ATGAGTGCCATTGAAGTTAAGAACCTGGTGAAAAAATTCCACGGTCAGACGGTGCTGCACGGTATCGACCTTGAGGTAAAGCCTGGCGAAGTGGTGGCAATTATCGGTCCGAGTGGTTCCGGCAAAACCACGTTGCTACGCAGCATAAATCTGCTGGAACAACCCGAAGCGGGAACGATCACCGTTGGCGATATCACTATTGATACTGCACGTTCATTAAGTCAGCAAAAATCTCTGATTCGCCAGTTGCGTCAGCACGTCGGGTTTGTCTTCCAGAACTTTAATTTGTTTCCGCATCGTACGGTGCTGGAGAACATTATTGAAGGGCCGGTGATCGTCAAAGGTGAACCGAAAGAAGAGGCCACGGCGCGCGCTCGCGAGCTGCTGGCAAAAGTTGGGCTGGCAGGTAAAGAAACCAGCTATCCACGTCGTTTGTCTGGCGGTCAACAGCAGCGTGTTGCGATTGCGCGTGCGCTGGCAATGCGTCCTGAGGTGATTTTGTTTGACGAGCCAACGTCAGCGCTGGATCCAGAGCTGGTGGGTGAAGTCCTGAACACCATCCGTCAGCTGGCGCAGGAAAAGCGCACGATGGTGATTGTGACGCACGAAATGAGCTTTGCCCGGGATGTTGCGGACCGGGCGATCTTTATGGACCAGGGGCGGATAGTCGAGCAGGGGGCCGCAAAAGCGTTATTTGCCGACCCCGAGCAGCCTCGCACCCGCCAGTTCCTCGAGAAGTTTCTGCTGCAATAA", + "dna_sequence_length": 753, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_1907", + "location": [ + [ + "NC_000913", + 1997814, + "-", + 753 + ] + ], + "md5": "18ee38e9138394676d1bb3ab54203bd8", + "parent_gene": "", + "protein_md5": "160c5bd606a9db420ee91378c8c1c5f4", + "protein_translation": "MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQPRTRQFLEKFLLQ", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006386" + ], + [ + "gene_synonym", + "ECK1917" + ], + [ + "gene_synonym", + "EcoGene:EG14037" + ], + [ + "gene_synonym", + "GI:16129865" + ], + [ + "gene_synonym", + "GeneID:949105" + ], + [ + "gene_synonym", + "JW1903" + ], + [ + "gene_synonym", + "NP_416428.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFT2" + ], + [ + "gene_synonym", + "b1918" + ], + [ + "gene_synonym", + "yecS" + ] + ], + "dna_sequence": "ATGCAAGAAAGTATACAACTGGTTATTGATTCCTTGCCGTTCCTGCTGAAAGGGGCTGGGTATACGCTGCAACTCAGTATCGGCGGCATGTTTTTTGGCTTACTGCTCGGGTTTATTCTCGCGCTGATGCGTCTGTCGCCAATCTGGCCCGTGCGCTGGCTGGCGCGTTTTTATATCTCTATTTTTCGTGGTACGCCGCTCATCGCACAACTGTTTATGATCTATTACGGCCTGCCGCAGTTTGGTATCGAATTAGATCCCATTCCGTCAGCAATGATTGGTCTGTCGTTGAACACTGCCGCCTATGCTGCCGAAACGCTGCGCGCCGCCATTTCTTCTATTGATAAAGGTCAGTGGGAAGCGGCAGCCAGTATTGGTATGACGCCGTGGCAGACCATGCGTCGCGCGATTTTGCCACAGGCGGCGCGTGTGGCGTTGCCGCCGCTGTCGAACAGCTTTATTAGCCTGGTAAAAGATACGTCGCTGGCCGCGACAATCCAGGTGCCGGAGCTGTTCCGTCAGGCGCAGTTGATTACCTCGCGTACGCTGGAGGTGTTCACCATGTATCTGGCGGCTTCGCTCATCTACTGGATCATGGCGACTGTGTTATCGACGTTGCAGAACCATTTTGAGAATCAACTTAATCGCCAGGAGAGAGAACCAAAATGA", + "dna_sequence_length": 669, + "functions": [ + "ABC family putative inner membrane permease" + ], + "id": "CDS_1908", + "location": [ + [ + "NC_000913", + 1998479, + "-", + 669 + ] + ], + "md5": "c798cb6daee2f7aac4cf1c64e03c85d6", + "parent_gene": "", + "protein_md5": "ccfb4a7497fbd98dafee3c38a9c78618", + "protein_translation": "MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQEREPK", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006389" + ], + [ + "gene_synonym", + "ECK1918" + ], + [ + "gene_synonym", + "EcoGene:EG14038" + ], + [ + "gene_synonym", + "GI:90111355" + ], + [ + "gene_synonym", + "GeneID:946831" + ], + [ + "gene_synonym", + "JW5313" + ], + [ + "gene_synonym", + "NP_416429.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76316" + ], + [ + "gene_synonym", + "b1919" + ], + [ + "gene_synonym", + "dcyD" + ], + [ + "gene_synonym", + "yedO" + ] + ], + "dna_sequence": "ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTTTTCTGATTATCTAGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTAAGCTGGAATTTCTCGCGGCAGATGCTCTGCGTGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCATGTGCGGCAGACTGCCGCAGTCGCTGCCAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGCAGAAAACTATTTAACCAACGGCAATCGCTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCGATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGTTCTAATGCTCTTGGCGCGCTAGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTCATCGGTGGTAGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCGAACTGATTGGCGTGACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAAGAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGAAGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGGGGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGTGCGCCTGCGCTGTTCGCCTATCATCCCCACGTTTAG", + "dna_sequence_length": 987, + "functions": [ + "D-cysteine desulfhydrase, PLP-dependent" + ], + "id": "CDS_1909", + "location": [ + [ + "NC_000913", + 1999480, + "-", + 987 + ] + ], + "md5": "0cf1ccbe976f29bad821dcdc2b801452", + "parent_gene": "", + "protein_md5": "5915fd294adc50bead12c662ce0d2e54", + "protein_translation": "MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006392" + ], + [ + "gene_synonym", + "ECK1919" + ], + [ + "gene_synonym", + "EcoGene:EG12680" + ], + [ + "gene_synonym", + "GI:16129867" + ], + [ + "gene_synonym", + "GeneID:948833" + ], + [ + "gene_synonym", + "JW1905" + ], + [ + "gene_synonym", + "NP_416430.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM9" + ], + [ + "gene_synonym", + "b1920" + ], + [ + "gene_synonym", + "fliY" + ], + [ + "gene_synonym", + "yzzR" + ] + ], + "dna_sequence": "ATGAAATTAGCACATCTGGGACGTCAGGCATTGATGGGTGTGATGGCCGTGGCGCTGGTTGCGGGCATGAGCGTTAAAAGTTTTGCAGATGAAGGTCTGCTTAATAAAGTTAAAGAGCGCGGCACGCTGCTGGTAGGGCTGGAAGGAACTTATCCGCCGTTCAGTTTTCAGGGAGATGACGGCAAATTAACCGGTTTTGAAGTGGAATTTGCCCAACAGCTGGCAAAACATCTTGGCGTTGAGGCGTCACTAAAACCGACCAAATGGGACGGTATGCTGGCGTCGCTGGACTCTAAACGTATTGATGTGGTGATTAATCAGGTCACCATTTCTGATGAGCGCAAGAAAAAATACGATTTCTCAACCCCGTACACCATTTCTGGTATTCAGGCGCTGGTGAAAAAAGGTAACGAAGGCACCATTAAAACAGCCGATGATCTGAAAGGCAAAAAAGTGGGGGTCGGTCTGGGCACCAACTATGAAGAGTGGCTGCGGCAGAATGTTCAGGGCGTCGATGTGCGTACCTATGATGATGACCCGACCAAATATCAGGATCTGCGCGTAGGGCGTATCGATGCGATCCTCGTTGATCGTCTGGCGGCGCTGGATCTGGTGAAGAAAACCAACGATACGCTGGCAGTAACCGGTGAAGCATTCTCCCGTCAGGAGTCTGGCGTGGCGCTGCGTAAAGGAAATGAGGACCTGCTGAAAGCAGTGAATGATGCAATTGCGGAAATGCAAAAAGATGGCACTCTGCAAGCCCTTTCCGAAAAATGGTTTGGTGCTGATGTGACCAAATAA", + "dna_sequence_length": 801, + "functions": [ + "cystine transporter subunit" + ], + "id": "CDS_1910", + "location": [ + [ + "NC_000913", + 2000385, + "-", + 801 + ] + ], + "md5": "485f77c7b87d0f3c8eedcbd63414e4b3", + "parent_gene": "", + "protein_md5": "da092854e06ff8159d9667c957de75b0", + "protein_translation": "MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006394" + ], + [ + "gene_synonym", + "ECK1920" + ], + [ + "gene_synonym", + "EcoGene:EG11356" + ], + [ + "gene_synonym", + "GI:90111356" + ], + [ + "gene_synonym", + "GeneID:946833" + ], + [ + "gene_synonym", + "JW1906" + ], + [ + "gene_synonym", + "NP_416431.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52627" + ], + [ + "gene_synonym", + "b1921" + ], + [ + "gene_synonym", + "fliZ" + ], + [ + "gene_synonym", + "yedH" + ] + ], + "dna_sequence": "ATGATGGTGCAGCACCTGAAAAGACGGCCATTAAGCCGCTATCTTAAAGACTTTAAACACAGCCAGACCCATTGCGCGCATTGCCGTAAATTACTCGATCGCATTACCTTAGTTCGCGACGGCAAAATAGTGAATAAAATCGAGATTTCCCGCCTGGACACGCTGCTTGATGAAAATGGCTGGCAAACGGAACAAAAATCATGGGCGGCATTGTGCCGATTTTGCGGTGATTTACATTGCAAAACGCAGAGTGATTTTTTCGATATTATCGGCTTTAAGCAATTTCTTTTTGAGCAAACTGAAATGAGCCCAGGTACGGTGCGTGAATATGTCGTTCGTTTGCGCCGTTTGGGGAATCATCTACACGAGCAAAATATTTCCCTCGATCAGCTGCAGGACGGTTTCCTTGATGAAATCCTCGCCCCGTGGCTGCCCACCACCAGCACCAACAATTACCGCATCGCGTTACGGAAGTATCAACACTATCAGCGCCAAACCTGTACCAGACTTGTGCAGAAATCCTCCAGCCTGCCTTCTTCTGATATATATTAA", + "dna_sequence_length": 552, + "functions": [ + "RpoS antagonist", + "putative regulator of FliA activity" + ], + "id": "CDS_1911", + "location": [ + [ + "NC_000913", + 2001024, + "-", + 552 + ] + ], + "md5": "8e51ee4bbabdd904f7c5812dca1ccc72", + "parent_gene": "", + "protein_md5": "79fa884d88f90b5215c9375b9faf1cfb", + "protein_translation": "MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCTRLVQKSSSLPSSDIY", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006396" + ], + [ + "gene_synonym", + "ECK1921" + ], + [ + "gene_synonym", + "EcoGene:EG11355" + ], + [ + "gene_synonym", + "GI:49176170" + ], + [ + "gene_synonym", + "GeneID:948824" + ], + [ + "gene_synonym", + "JW1907" + ], + [ + "gene_synonym", + "NP_416432.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM6" + ], + [ + "gene_synonym", + "b1922" + ], + [ + "gene_synonym", + "flaD" + ], + [ + "gene_synonym", + "fliA" + ], + [ + "gene_synonym", + "rpoF" + ] + ], + "dna_sequence": "GTGAATTCACTCTATACCGCTGAAGGTGTAATGGATAAACACTCGCTGTGGCAGCGTTATGTCCCGCTGGTGCGTCACGAAGCATTGCGCCTGCAGGTTCGACTGCCCGCGAGCGTGGAACTTGACGATCTGCTACAGGCGGGCGGCATTGGGTTACTTAATGCCGTCGAACGCTATGACGCCCTACAAGGAACGGCATTTACAACTTACGCAGTGCAGCGTATCCGTGGCGCTATGCTGGATGAACTTCGCAGCCGTGACTGGGTGCCGCGCAGCGTGCGACGCAACGCGCGTGAAGTGGCACAGGCAATAGGGCAACTGGAGCAGGAACTTGGCCGCAACGCCACGGAAACTGAGGTAGCGGAACGTTTAGGGATCGATATTGCCGATTATCGCCAAATGTTGCTCGACACCAATAACAGCCAGCTCTTCTCCTACGATGAGTGGCGCGAAGAGCACGGCGATAGCATCGAACTGGTTACTGATGATCATCAGCGAGAAAACCCGCTACAACAACTACTGGACAGTAATCTGCGCCAGCGGGTGATGGAAGCCATCGAAACGTTGCCGGAGCGCGAAAAACTGGTATTAACCCTCTATTACCAGGAAGAGCTGAATCTCAAAGAGATTGGCGCGGTGCTGGAGGTCGGGGAATCGCGGGTCAGTCAGTTACACAGCCAGGCTATTAAACGGTTACGCACTAAACTGGGTAAGTTATAA", + "dna_sequence_length": 720, + "functions": [ + "RNA polymerase, sigma 28 (sigma F) factor" + ], + "id": "CDS_1912", + "location": [ + [ + "NC_000913", + 2001789, + "-", + 720 + ] + ], + "md5": "7b38cdcae9fe8a1fb52935aadadfb136", + "parent_gene": "", + "protein_md5": "e26f6933b9e42c011e91fa191d68775e", + "protein_translation": "MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006402" + ], + [ + "gene_synonym", + "ECK1922" + ], + [ + "gene_synonym", + "EcoGene:EG10321" + ], + [ + "gene_synonym", + "GI:16129870" + ], + [ + "gene_synonym", + "GeneID:949101" + ], + [ + "gene_synonym", + "H" + ], + [ + "gene_synonym", + "JW1908" + ], + [ + "gene_synonym", + "NP_416433.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04949" + ], + [ + "gene_synonym", + "b1923" + ], + [ + "gene_synonym", + "flaF" + ], + [ + "gene_synonym", + "fliC" + ], + [ + "gene_synonym", + "hag" + ] + ], + "dna_sequence": "ATGGCACAAGTCATTAATACCAACAGCCTCTCGCTGATCACTCAAAATAATATCAACAAGAACCAGTCTGCGCTGTCGAGTTCTATCGAGCGTCTGTCTTCTGGCTTGCGTATTAACAGCGCGAAGGATGACGCAGCGGGTCAGGCGATTGCTAACCGTTTCACCTCTAACATTAAAGGCCTGACTCAGGCGGCCCGTAACGCCAACGACGGTATCTCCGTTGCGCAGACCACCGAAGGCGCGCTGTCCGAAATCAACAACAACTTACAGCGTGTGCGTGAACTGACGGTACAGGCCACTACCGGTACTAACTCTGAGTCTGATCTGTCTTCTATCCAGGACGAAATTAAATCCCGTCTGGATGAAATTGACCGCGTATCTGGTCAGACCCAGTTCAACGGCGTGAACGTGCTGGCAAAAAATGGCTCCATGAAAATCCAGGTTGGCGCAAATGATAACCAGACTATCACTATCGATCTGAAGCAGATTGATGCTAAAACTCTTGGCCTTGATGGTTTTAGCGTTAAAAATAACGATACAGTTACCACTAGTGCTCCAGTAACTGCTTTTGGTGCTACCACCACAAACAATATTAAACTTACTGGAATTACCCTTTCTACGGAAGCAGCCACTGATACTGGCGGAACTAACCCAGCTTCAATTGAGGGTGTTTATACTGATAATGGTAATGATTACTATGCGAAAATCACCGGTGGTGATAACGATGGGAAGTATTACGCAGTAACAGTTGCTAATGATGGTACAGTGACAATGGCGACTGGAGCAACGGCAAATGCAACTGTAACTGATGCAAATACTACTAAAGCTACAACTATCACTTCAGGCGGTACACCTGTTCAGATTGATAATACTGCAGGTTCCGCAACTGCCAACCTTGGTGCTGTTAGCTTAGTAAAACTGCAGGATTCCAAGGGTAATGATACCGATACATATGCGCTTAAAGATACAAATGGCAATCTTTACGCTGCGGATGTGAATGAAACTACTGGTGCTGTTTCTGTTAAAACTATTACCTATACTGACTCTTCCGGTGCCGCCAGTTCTCCAACCGCGGTCAAACTGGGCGGAGATGATGGCAAAACAGAAGTGGTCGATATTGATGGTAAAACATACGATTCTGCCGATTTAAATGGCGGTAATCTGCAAACAGGTTTGACTGCTGGTGGTGAGGCTCTGACTGCTGTTGCAAATGGTAAAACCACGGATCCGCTGAAAGCGCTGGACGATGCTATCGCATCTGTAGACAAATTCCGTTCTTCCCTCGGTGCGGTGCAAAACCGTCTGGATTCCGCGGTTACCAACCTGAACAACACCACTACCAACCTGTCTGAAGCGCAGTCCCGTATTCAGGACGCCGACTATGCGACCGAAGTGTCCAATATGTCGAAAGCGCAGATCATCCAGCAGGCCGGTAACTCCGTGTTGGCAAAAGCTAACCAGGTACCGCAGCAGGTTCTGTCTCTGCTGCAGGGTTAA", + "dna_sequence_length": 1497, + "functions": [ + "flagellar filament structural protein (flagellin)" + ], + "id": "CDS_1913", + "location": [ + [ + "NC_000913", + 2003606, + "-", + 1497 + ] + ], + "md5": "20e52eafa4ae40df7ac5cc928d3440a5", + "parent_gene": "", + "protein_md5": "a17111da9d4b50d55545c8678de9e9ef", + "protein_translation": "MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDLKQIDAKTLGLDGFSVKNNDTVTTSAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDYYAKITGGDNDGKYYAVTVANDGTVTMATGATANATVTDANTTKATTITSGGTPVQIDNTAGSATANLGAVSLVKLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGGDDGKTEVVDIDGKTYDSADLNGGNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG", + "protein_translation_length": 498, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006407" + ], + [ + "gene_synonym", + "ECK1923" + ], + [ + "gene_synonym", + "EcoGene:EG10841" + ], + [ + "gene_synonym", + "GI:16129871" + ], + [ + "gene_synonym", + "GeneID:946428" + ], + [ + "gene_synonym", + "JW1909" + ], + [ + "gene_synonym", + "NP_416434.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24216" + ], + [ + "gene_synonym", + "b1924" + ], + [ + "gene_synonym", + "flbC" + ], + [ + "gene_synonym", + "fliD" + ], + [ + "gene_synonym", + "rfs" + ] + ], + "dna_sequence": "ATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGCAATCGTCGTTTACCGCTAAACTTAGCGCCTACGGTACGCTGAAAAGCGCGCTGACGACTTTCCAGACCGCCAATACTGCATTGTCTAAAGCCGATCTTTTTTCCGCCACCAGCACCACCAGCAGCACCACCGCGTTCAGTGCCACCACTGCGGGTAACGCCATCGCCGGGAAATACACCATCAGCGTCACCCATCTGGCGCAGGCGCAAACCCTGACCACGCGCACCACCAGAGACGATACGAAAACGGCGATCGCCACCAGCGACAGTAAACTCACCATTCAACAAGGCGGCGACAAAGATCCGATTACCATTGATATCAGCGCGGCTAACTCATCGTTAAGCGGGATCCGTGATGCCATCAACAACGCAAAAGCAGGCGTAAGCGCAAGCATCATTAACGTGGGTAACGGTGAATATCGTCTGTCAGTCACATCAAATGACACCGGCCTTGATAATGCGATGACACTCTCGGTCAGCGGTGATGATGCGCTACAAAGTTTTATGGGCTATGACGCCAGTGCCAGCAGCAACGGTATGGAGGTCTCGGTTGCCGCCCAGAATGCGCAGCTGACAGTCAACAACGTCGCCATCGAGAACAGCAGCAACACCATCAGCGACGCGCTGGAAAACATCACCCTGAACCTGAACGATGTCACCACGGGCAACCAGACGCTAACCATCACTCAGGACACCTCCAAAGCGCAAACGGCGATTAAAGACTGGGTGAATGCCTACAACTCGCTAATAGATACCTTCAGCAGCCTGACCAAATACACCGCCGTAGATGCGGGAGCTGATAGCCAGAGTTCTAGCAATGGTGCACTGCTCGGCGACTCCACGCTGCGGACGATTCAGACGCAGTTGAAATCGATGCTGAGTAATACCGTCAGTTCTTCCAGCTATAAAACGTTGGCGCAGATTGGTATCACGACCGATCCCAGCGATGGCAAACTGGAACTGGATGCCGACAAACTCACCGCTGCACTGAAAAAAGATGCCAGCGGCGTAGGTGCATTGATTGTTGGCGATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGACAACGGGCATTATTAAAGCCGCTACCGATGGCGTTAGTAAGACCCTGAATAAATTAACTAAAGACTACAACGCCGCCAGCGATCGCATTGATGCGCAGGTCGCTCGCTACAAAGAACAATTTACCCAACTGGACGTTTTAATGACCTCGTTAAACAGCACCAGCAGCTACTTAACGCAGCAGTTCGAAAACAACAGTAATTCCAAGTAA", + "dna_sequence_length": 1407, + "functions": [ + "flagellar filament capping protein" + ], + "id": "CDS_1914", + "location": [ + [ + "NC_000913", + 2003872, + "+", + 1407 + ] + ], + "md5": "a2b4ac8c41d32b7b66169c901cb1bdb9", + "parent_gene": "", + "protein_md5": "b689e7495bae7e78bb590aad31ebb3c7", + "protein_translation": "MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK", + "protein_translation_length": 468, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006409" + ], + [ + "gene_synonym", + "ECK1924" + ], + [ + "gene_synonym", + "EcoGene:EG11388" + ], + [ + "gene_synonym", + "GI:16129872" + ], + [ + "gene_synonym", + "GeneID:946429" + ], + [ + "gene_synonym", + "JW1910" + ], + [ + "gene_synonym", + "NP_416435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26608" + ], + [ + "gene_synonym", + "b1925" + ], + [ + "gene_synonym", + "fliS" + ] + ], + "dna_sequence": "ATGTACGCGGCAAAAGGCACCCAGGCCTATGCACAAATTGGCGTCGAAAGCGCCGTAATGAGCGCCAGCCAGCAGCAGCTGGTCACCATGCTATTTGATGGAGTGCTGAGCGCACTGGTTAGAGCGAGCCTGTTTATGCAGGACAACAATCAGCAAGGCAAAGGCGTCTCTTTGTCAAAAGCGATCAACATCATTGAGAACGGACTGCGGGTGAGTCTTGATGAAGAGAGCAAAGACGAACTAACCCAAAACTTGATTGCTCTTTATAGCTATATGGTCAGGCGCTTGCTGCAAGCCAATTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGAAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGA", + "dna_sequence_length": 411, + "functions": [ + "flagellar protein potentiates polymerization" + ], + "id": "CDS_1915", + "location": [ + [ + "NC_000913", + 2005303, + "+", + 411 + ] + ], + "md5": "172b62b0bad693cefdffab996d83dda0", + "parent_gene": "", + "protein_md5": "b779260995a5d02e533285168f594b9f", + "protein_translation": "MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRASLFMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLRNDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006411" + ], + [ + "gene_synonym", + "ECK1925" + ], + [ + "gene_synonym", + "EcoGene:EG11389" + ], + [ + "gene_synonym", + "GI:16129873" + ], + [ + "gene_synonym", + "GeneID:946433" + ], + [ + "gene_synonym", + "JW1911" + ], + [ + "gene_synonym", + "NP_416436.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABY2" + ], + [ + "gene_synonym", + "b1926" + ], + [ + "gene_synonym", + "fliT" + ] + ], + "dna_sequence": "ATGAACCATGCACCGCATTTATATTTCGCCTGGCAACAACTCGTCGAAAAAAGCCAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGCGTATGTGAATGCGGTGCAGGAGATTGCACATTTGACTGAAGAGGTTGACCCGTCCACCACGATGCAGGAGCAGCTCCGCCCGATGCTGCGCCTGATTCTCGACAACGAAAGCAAGGTAAAGCAGTTATTACAGATTCGGATGGATGAACTGGCGAAACTGGTCGGTCAGTCATCGGTGCAAAAATCGGTGTTAAGTGCCTATGGCGATCAGGGCGGCTTTGTGCTGGCTCCGCAGGATAACCTCTTTTGA", + "dna_sequence_length": 366, + "functions": [ + "putative flagellar synthesis and assembly chaperone" + ], + "id": "CDS_1916", + "location": [ + [ + "NC_000913", + 2005713, + "+", + 366 + ] + ], + "md5": "9f6a87ba0b9907d8532539d5765db95f", + "parent_gene": "", + "protein_md5": "57193e5948ba0def8bea68ffd8eaa3dd", + "protein_translation": "MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNLF", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006414" + ], + [ + "gene_synonym", + "ECK1926" + ], + [ + "gene_synonym", + "EcoGene:EG11387" + ], + [ + "gene_synonym", + "GI:16129874" + ], + [ + "gene_synonym", + "GeneID:946434" + ], + [ + "gene_synonym", + "JW1912" + ], + [ + "gene_synonym", + "NP_416437.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26612" + ], + [ + "gene_synonym", + "amyA" + ], + [ + "gene_synonym", + "b1927" + ], + [ + "gene_synonym", + "yedC" + ] + ], + "dna_sequence": "ATGCGTAATCCCACGCTGTTACAATGTTTTCACTGGTATTACCCGGAAGGCGGTAAGCTCTGGCCTGAACTGGCCGAGCGCGCCGACGGTTTTAATGATATTGGTATCAATATGGTCTGGTTGCCGCCCGCCTATAAAGGCGCATCGGGCGGGTATTCGGTCGGCTACGACTCCTATGATTTATTTGATTTAGGCGAGTTTGATCAGAAAGGCAGCATCCCTACTAAATATGGCGATAAAGCACAACTGCTGGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAACCCTGACGAAGATGGCATTTTTAAAATTGTTAACGACTACACCGGCGAAGGCTGGAACGATCAGGTTGATGATGAATTAGGTAATTTCGATTATCTGATGGGCGAGAATATCGATTTTCGCAATCATGCCGTGACGGAAGAGATTAAATACTGGGCGCGCTGGGTGATGGAACAAACGCAATGCGACGGTTTTCGTCTTGATGCGGTCAAACATATTCCAGCCTGGTTTTATAAAGAGTGGATCGAACACGTACAGGAAGTTGCGCCAAAGCCGCTGTTTATTGTGGCGGAGTACTGGTCGCATGAAGTTGATAAGCTGCAAACGTATATTGATCAGGTGGAAGGCAAAACCATGCTGTTTGATGCGCCGCTGCAGATGAAATTCCATGAAGCATCGCGCATGGGGCGCGACTACGACATGACGCAGATTTTCACGGGTACATTAGTGGAAGCCGATCCTTTCCACGCCGTGACGCTCGTTGCCAATCACGACACCCAACCGTTGCAAGCCCTCGAAGCGCCGGTCGAACCGTGGTTTAAACCGCTGGCGTATGCCTTAATTTTGTTGCGGGAAAATGGCGTTCCTTCGGTATTCTATCCGGACCTCTACGGTGCGCATTACGAAGATGTCGGTGGTGACGGGCAAACCTATCCGATAGATATGCCAATAATCGAACAGCTTGATGAGTTAATTCTCGCCCGTCAGCGTTTCGCCCACGGTGTACAGACGTTATTTTTCGACCATCCGAACTGCATTGCCTTTAGCCGCAGTGGCACCGACGAATTTCCCGGCTGCGTGGTGGTCATGTCGAACGGGGATGATGGCGAAAAAACCATTCATCTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGCAGCGTCAGCGTGTGGGTTATCGAAGAGGTGATTTAA", + "dna_sequence_length": 1488, + "functions": [ + "cytoplasmic alpha-amylase" + ], + "id": "CDS_1917", + "location": [ + [ + "NC_000913", + 2006156, + "+", + 1488 + ] + ], + "md5": "d8e34dba164ea3e831e8b5cbb490b633", + "parent_gene": "", + "protein_md5": "1bc1d3c20e594df41f355de09ae62ef7", + "protein_translation": "MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPIIEQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEFPGCVVVMSNGDDGEKTIHLGENYGNKTWRDFLGNRQERVVTDENGEATFFCNGGSVSVWVIEEVI", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006416" + ], + [ + "gene_synonym", + "ECK1927" + ], + [ + "gene_synonym", + "EcoGene:EG11659" + ], + [ + "gene_synonym", + "GI:16129875" + ], + [ + "gene_synonym", + "GeneID:949082" + ], + [ + "gene_synonym", + "JW1913" + ], + [ + "gene_synonym", + "NP_416438.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31063" + ], + [ + "gene_synonym", + "b1928" + ], + [ + "gene_synonym", + "yedD" + ] + ], + "dna_sequence": "ATGAAAAAACTCGCAATTGCAGGCGCGCTCTTGTTGCTGGCGGGCTGTGCCGAAGTCGAAAACTATAACAATGTCGTGAAAACCCCCGCGCCGGACTGGCTGGCGGGCTACTGGCAGACCAAAGGGCCGCAACGTGCGCTGGTCAGCCCGGAAGCGATAGGCAGCCTGATTGTCACTAAAGAGGGCGATACCCTGGATTGCCGTCAGTGGCAGCGGGTGATTGCCGTGCCGGGTAAGTTGACATTGATGTCTGATGATCTCACTAACGTTACCGTAAAACGTGAGCTGTACGAGGTTGAGCGTGACGGTAACACCATTGAGTACGATGGTATGACGATGGAGCGTGTGGATCGCCCGACAGCAGAGTGTGCCGCCGCGCTGGATAAAGCGCCGTTACCGACGCCACTGCCGTAA", + "dna_sequence_length": 414, + "functions": [ + "lipoprotein" + ], + "id": "CDS_1918", + "location": [ + [ + "NC_000913", + 2008090, + "-", + 414 + ] + ], + "md5": "3f449cc1c8b5b1a8e8fbf46f6d013cb4", + "parent_gene": "", + "protein_md5": "e99379590fb5f2cc1c89fea816ad8452", + "protein_translation": "MKKLAIAGALLLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006422" + ], + [ + "gene_synonym", + "ECK1928" + ], + [ + "gene_synonym", + "EcoGene:EG11660" + ], + [ + "gene_synonym", + "GI:16129876" + ], + [ + "gene_synonym", + "GeneID:945192" + ], + [ + "gene_synonym", + "JW1914" + ], + [ + "gene_synonym", + "NP_416439.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31064" + ], + [ + "gene_synonym", + "b1929" + ], + [ + "gene_synonym", + "yedE" + ] + ], + "dna_sequence": "ATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGTCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCATTATCGCCGGTTTTGGCGCGCGTCTGGCAATGGGCTGTAACCTGGCGGCGTTCTTTACCGGTATTCCTCAGTTCTCGCTGCATGCCTGGTTCTTTGCCATCGCCACTGCCATTGGTTCATGGTTTGGCGCGCGCTTTACCCTGCTGCCCATCTTCCGTATTCCCGTGAAAATGCAGAAAGTTTCTGCCGCCTCACCGCTGACGCAAAAACCGGATCAGGCGCGGCGTCGTTTTCGTCTCGGGATGCTGGTCTTTTTCGGCATGCTGGGCTGGGCGCTGCTCACAGCGATGAACCAACCCAAACTGGGGCTGGCAATGCTGTTTGGCGTCGGCTTTGGTTTACTGATTGAACGTGCGCAAATCTGCTTTACTTCAGCGTTCCGCGATATGTGGATCACCGGACGTACCCATATGGCGAAAGCAATCATTATCGGTATGGCGGTGAGTGCCATCGGGATCTTCAGTTACGTACAGTTAGGCGTTGAACCCAAAATCATGTGGGCGGGACCAAACGCGGTAATTGGTGGTTTACTGTTTGGTTTTGGCATCGTGCTGGCTGGCGGCTGCGAAACCGGCTGGATGTACCGCGCGGTAGAAGGCCAGGTGCACTACTGGTGGGTCGGTCTGGGCAATGTGATCGGCTCAACGATTCTGGCGTATTACTGGGATGATTTCGCTCCGGCGCTGGCCACCGACTGGGACAAAATCAACCTGCTGAAAACCTTTGGTCCGATGGGTGGCCTGCTGGTGACATATTTGCTGTTGTTTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGA", + "dna_sequence_length": 1206, + "functions": [ + "UPF0394 family sulphur transport domain-containing inner membrane protein" + ], + "id": "CDS_1919", + "location": [ + [ + "NC_000913", + 2008277, + "+", + 1206 + ] + ], + "md5": "295476e66d08362daf3a3df76ab4bc6a", + "parent_gene": "", + "protein_md5": "2e5fb87c8be88e819af54edd7a6c1b15", + "protein_translation": "MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSWFGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQPKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFAALMLIIGWEKRFFRRAAPQTAKEIA", + "protein_translation_length": 401, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006425" + ], + [ + "gene_synonym", + "ECK1929" + ], + [ + "gene_synonym", + "EcoGene:EG11661" + ], + [ + "gene_synonym", + "GI:16129877" + ], + [ + "gene_synonym", + "GeneID:946909" + ], + [ + "gene_synonym", + "JW1915" + ], + [ + "gene_synonym", + "NP_416440.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA31" + ], + [ + "gene_synonym", + "b1930" + ], + [ + "gene_synonym", + "yedF" + ] + ], + "dna_sequence": "ATGAAAAATATCGTTCCTGATTACCGCCTTGATATGGTGGGTGAACCCTGCCCTTATCCGGCAGTCGCAACCCTTGAGGCGATGCCGCAGTTAAAAAAAGGGGAAATCCTGGAAGTGGTGAGCGACTGTCCGCAGTCGATCAATAATATTCCACTGGATGCGCGTAATCACGGCTATACGGTGCTGGATATTCAGCAAGACGGGCCGACCATTCGTTATTTAATTCAGAAGTAA", + "dna_sequence_length": 234, + "functions": [ + "putative TusA family sulfurtransferase" + ], + "id": "CDS_1920", + "location": [ + [ + "NC_000913", + 2009479, + "+", + 234 + ] + ], + "md5": "21a870d54e7c747bd67902cf541fd92e", + "parent_gene": "", + "protein_md5": "3ee66204766ce5067aac3c93ef2e04c6", + "protein_translation": "MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYTVLDIQQDGPTIRYLIQK", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006428" + ], + [ + "gene_synonym", + "ECK1930" + ], + [ + "gene_synonym", + "EcoGene:EG13278" + ], + [ + "gene_synonym", + "GI:49176171" + ], + [ + "gene_synonym", + "GeneID:946435" + ], + [ + "gene_synonym", + "JW1916" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76318" + ], + [ + "gene_synonym", + "YP_025310.1" + ], + [ + "gene_synonym", + "b1931" + ], + [ + "gene_synonym", + "yedG" + ], + [ + "gene_synonym", + "yedK" + ] + ], + "dna_sequence": "ATGTGTGGACGCTTTGCCCAATCCCAAACGCGTGAAGATTACCTTGCGCTTCTCGCGGAAGATATTGAACGCGATATTCCCTATGATCCCGAACCCATTGGCAGATACAACGTCGCGCCGGGAACCAAAGTCCTACTGCTCAGTGAACGTGATGAACACCTTCATCTGGATCCGGTTTTCTGGGGATATGCTCCCGGATGGTGGGATAAACCGCCGCTGATTAACGCCCGCGTAGAAACTGCGGCAACCAGTCGTATGTTTAAACCGCTCTGGCAACATGGTCGGGCAATCTGTTTTGCCGATGGCTGGTTTGAGTGGAAAAAAGAAGGCGACAAAAAACAGCCTTTTTTTATCTATCGTGCTGATGGACAACCTATTTTTATGGCCGCGATAGGTAGCACACCATTTGAGCGTGGTGACGAAGCCGAAGGATTTTTGATCGTCACTGCTGCGGCAGATCAAGGTCTGGTAGATATTCATGACCGCCGCCCACTGGTACTGTCGCCAGAAGCTGCGCGGGAATGGATGCGGCAAGAGATTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGA", + "dna_sequence_length": 669, + "functions": [ + "DUF159 family protein" + ], + "id": "CDS_1921", + "location": [ + [ + "NC_000913", + 2009821, + "+", + 669 + ] + ], + "md5": "2c5c8b472510d3f7cdb0f0210481ca73", + "parent_gene": "", + "protein_md5": "479b7c694c57d3b4c0551dff4f2b733b", + "protein_translation": "MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPEAAREWMRQEISGKEASEIAASGCVPANQFSWHPVSRAVGNVKNQGAELIQPV", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006433" + ], + [ + "gene_synonym", + "ECK1931" + ], + [ + "gene_synonym", + "EcoGene:EG13279" + ], + [ + "gene_synonym", + "GI:16129879" + ], + [ + "gene_synonym", + "GeneID:946437" + ], + [ + "gene_synonym", + "JW1917" + ], + [ + "gene_synonym", + "NP_416442.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76319" + ], + [ + "gene_synonym", + "b1932" + ], + [ + "gene_synonym", + "yedL" + ] + ], + "dna_sequence": "ATGTTCACGATTAAAACAGATGATCTCACCCATCCAGCAGTGCAAGCATTAGTGGCTTACCATATTTCCGGCATGCTGCAGCAGTCTCCCCCCGAAAGCAGTCATGCTTTAGATGTGCAAAAATTACGTAACCCGACAGTGACATTCTGGTCAGTATGGGAAGGCGAACAACTCGCAGGAATTGGTGCGCTGAAGTTGCTGGATGATAAACACGGCGAGCTGAAATCAATGCGTACCGCGCCAAATTATTTACGTCGTGGTGTCGCCAGTCTGATTTTACGCCACATTTTGCAGGTCGCCCAGGACAGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGCCATGA", + "dna_sequence_length": 480, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_1922", + "location": [ + [ + "NC_000913", + 2010600, + "+", + 480 + ] + ], + "md5": "9be0d03fd9e243f62b299f1266e49b68", + "parent_gene": "", + "protein_md5": "58f0906a588b171e3dfd7c3e67d0372e", + "protein_translation": "MFTIKTDDLTHPAVQALVAYHISGMLQQSPPESSHALDVQKLRNPTVTFWSVWEGEQLAGIGALKLLDDKHGELKSMRTAPNYLRRGVASLILRHILQVAQDRCLHRLSLETGTQAGFTACHQLYLKHGFADCEPFADYRLDPHSRFLSLTLCENNELP", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006435" + ], + [ + "gene_synonym", + "ASAP:ABE-0006437" + ], + [ + "gene_synonym", + "ASAP:ABE-0006440" + ], + [ + "gene_synonym", + "ASAP:ABE-0285096" + ], + [ + "gene_synonym", + "ECK1932" + ], + [ + "gene_synonym", + "EcoGene:EG13281" + ], + [ + "gene_synonym", + "GeneID:2847704" + ], + [ + "gene_synonym", + "JW1918" + ], + [ + "gene_synonym", + "JW5912" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76321" + ], + [ + "gene_synonym", + "b4495" + ], + [ + "gene_synonym", + "yedM" + ], + [ + "gene_synonym", + "yedN" + ] + ], + "dna_sequence": "ATGTTTCCATTAAATGATCTTTCGTTAAAAACTCAGCCGGTTCAATTAAATAAAGTCACATCTAATACTGAATCTACGATAAAACAACATGAGTTAGTATCTGATGATGCAATCATAAATGAATTATCAAGTGAGTTAGTCAGTTGTCTTGGAAATGGTAAGTTTACACCAATTAGTGAAGACAGCAAATTATTTAATATGCTGTCAGAATTTAAGTTATTGCACTCAGAATATTTCGAATGGGGTGATTATAGTCTCTGGTTTCAAGATTTCTCGATTTATAATAAGATAGGTTTTATCATGATAGAAAAAAATCAGGGAACTGGTAACCCACCCATTCGGCATAAATTAGAGTTTATATCGACTAATATTGCAGAGTTTCTAGACAACTTTACGAAAATTACAGATTCCAGACTTTGCAAAGGTTTCAGCGACTGGGCTAATTCAGTAAAAGAAGGCGCATCGAATGACTTCAAAAAAAATGTGGATATAGCATTGGTGAGATTGTTTAAATGTGTTGAACTCCACAATAGTAAACTTGACTTAACAGATCTTCACTTGGGGTCTTTGCCACCTCTTCCATCCTGGATTGAGGTGCTTTATCTTCGTCATAATGGCCTTGCCACAATACAAATTCCCAAATTCTGCAAAGAATTAGAGCTCGATTTCAATAATTATATGGTATTTCCAAAAGTATCCGATGGAATTACCCAGGTCTCCGTAGATAATAATCTGATATCGCGTGTTGACTCATCTCCGTCAAAGGCTATGACAATTTCTATTTATCGCAATAAAATATGGTAAATACCAGCAATGCCTGAGACTACTAAGCTGTTTAATTGTGGCGATAATAAGATAAAAGAAATTCAATACTTCCCAAATCATCTGGAGAAAGCACGTATGGAGTGTGATATTGAGGTTGTCTCTGCGATATATAGCAATAAAGAATTACTTTTTAAAGAATGTAATTCTTTTGAAGAGACATTTTTATGGACTTTGACAGGGATTTGCTATGAAAGATCGCAGCGAAAATATATTGTTACGAATCCCGCTGATTATGATAAATATTCCGATATGGTTAAAAAGTATGTAATAGATGGTGAGGAACTCATAATTAAATATTAA", + "dna_sequence_length": 1125, + "id": "CDS_1923", + "location": [ + [ + "NC_000913", + 2012351, + "-", + 312 + ], + [ + "NC_000913", + 2012040, + "-", + 678 + ], + [ + "NC_000913", + 2011357, + "-", + 135 + ] + ], + "md5": "2dd73df7510514015bd82a31f2568973", + "parent_gene": "", + "protein_md5": "4c44daec208409da643c7d0f3eb5617e", + "protein_translation": "MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFEWGDYSLWFQDFSIYNKIGFIMIEKNQGTGNPPIRHKLEFISTNIAEFLDNFTKITDSRLCKGFSDWANSVKEGASNDFKKNVDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIW", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006445" + ], + [ + "gene_synonym", + "ECK1934" + ], + [ + "gene_synonym", + "EcoGene:EG14259" + ], + [ + "gene_synonym", + "GeneID:946445" + ], + [ + "gene_synonym", + "JW5913" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76323" + ], + [ + "gene_synonym", + "b1936" + ], + [ + "gene_synonym", + "intG" + ] + ], + "dna_sequence": "GTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGGATGGCAGAAAACGTTCAGGATCAGGTATCCATTTTAAACCAGAAATTGAGTGAGTTTGCCCCATCCATGCCCCACGCG", + "dna_sequence_length": 162, + "id": "CDS_1924", + "location": [ + [ + "NC_000913", + 2012502, + "+", + 162 + ] + ], + "md5": "da3635745ba54eaab8369dc6f4a1608e", + "parent_gene": "", + "protein_md5": "90093116d3b8370a27ae356f76690299", + "protein_translation": "VVVTTSDVVMCQMRRSDVQGGYRVYGSWMAENVQDQVSILNQKLSEFAPSMPHA", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006447" + ], + [ + "gene_synonym", + "ECK1935" + ], + [ + "gene_synonym", + "EcoGene:EG11346" + ], + [ + "gene_synonym", + "GI:16129884" + ], + [ + "gene_synonym", + "GeneID:946446" + ], + [ + "gene_synonym", + "JW1921" + ], + [ + "gene_synonym", + "NP_416447.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8T5" + ], + [ + "gene_synonym", + "b1937" + ], + [ + "gene_synonym", + "flaAI" + ], + [ + "gene_synonym", + "flaN" + ], + [ + "gene_synonym", + "fliE" + ] + ], + "dna_sequence": "ATGTCAGCGATACAGGGGATTGAAGGGGTTATCAGCCAGTTACAGGCTACGGCGATGAGTGCGCGTGCGCAGGAATCACTGCCGCAACCGACCATTAGTTTTGCCGGGCAGCTGCACGCCGCGCTCGATCGCATTAGTGATACACAAACAGCTGCCCGCACGCAGGCAGAAAAATTCACTCTCGGTGAACCCGGCGTGGCGTTAAACGATGTGATGACCGATATGCAAAAAGCCTCAGTTTCTATGCAAATGGGGATTCAGGTGCGTAATAAGCTGGTGGCGGCGTATCAGGAAGTGATGAGCATGCAGGTGTAG", + "dna_sequence_length": 315, + "functions": [ + "flagellar basal-body component" + ], + "id": "CDS_1925", + "location": [ + [ + "NC_000913", + 2013014, + "-", + 315 + ] + ], + "md5": "5713a34c2106e0a863f8792e6e0c9b30", + "parent_gene": "", + "protein_md5": "04f7883eb4067e4777f3da3174173415", + "protein_translation": "MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006454" + ], + [ + "gene_synonym", + "ECK1936" + ], + [ + "gene_synonym", + "EcoGene:EG11347" + ], + [ + "gene_synonym", + "GI:16129885" + ], + [ + "gene_synonym", + "GeneID:946448" + ], + [ + "gene_synonym", + "JW1922" + ], + [ + "gene_synonym", + "NP_416448.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25798" + ], + [ + "gene_synonym", + "b1938" + ], + [ + "gene_synonym", + "flaAII.1" + ], + [ + "gene_synonym", + "flaBI" + ], + [ + "gene_synonym", + "fliF" + ] + ], + "dna_sequence": "ATGAATGCGACTGCAGCCCAGACAAAATCTCTTGAGTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGCCCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTGCATCGGTGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCATCTGGTTTCCAGCGCCGTTGCTGGTCTGCCGCCGGGAAACGTCACGCTGGTGGATCAGGGCGGACATCTGTTAACCCAGTCCAATACCAGCGGGCGCGATCTTAATGACGCTCAGTTGAAATATGCCAGCGATGTCGAAGGCCGTATTCAGCGGCGTATTGAAGCGATCCTGTCGCCTATTGTTGGTAACGGTAATATTCACGCCCAGGTTACGGCGCAGCTGGACTTCGCCAGTAAAGAACAAACGGAAGAACAGTATCGCCCTAACGGTGATGAATCTCATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGGGCGGCGTACCGGGGGCGTTGTCGAATCAACCGGCACCTGCGAATAACGCGCCAATCAGCACGCCTCCGGCAAATCAAAATAACCGCCAGCAGCAGGCGAGCACCACCAGCAATAGTGGGCCGCGTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTCGCGGTCGTGGTGAATTACAAAACCTTGCCAGATGGCAAACCGTTGCCTCTCAGCAACGAACAGATGAAGCAAATTGAAGATCTGACCCGCGAGGCGATGGGCTTTTCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGTACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAGGCGCAGGCCCGCGAGGAAGTGGAAGATGCGGTGGAAGTCCGCCTGAGCAAAGACGAACAACTACAACAACGGCGCGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAA", + "dna_sequence_length": 1659, + "functions": [ + "flagellar basal-body MS-ring and collar protein" + ], + "id": "CDS_1926", + "location": [ + [ + "NC_000913", + 2013229, + "+", + 1659 + ] + ], + "md5": "f410981d05f0627b8376371919b21d3d", + "parent_gene": "", + "protein_md5": "466759c940c8137175f062813eea0fe0", + "protein_translation": "MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE", + "protein_translation_length": 552, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006456" + ], + [ + "gene_synonym", + "ECK1937" + ], + [ + "gene_synonym", + "EcoGene:EG11654" + ], + [ + "gene_synonym", + "GI:16129886" + ], + [ + "gene_synonym", + "GeneID:946451" + ], + [ + "gene_synonym", + "JW1923" + ], + [ + "gene_synonym", + "NP_416449.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABZ1" + ], + [ + "gene_synonym", + "b1939" + ], + [ + "gene_synonym", + "flaAII.2" + ], + [ + "gene_synonym", + "flaBII" + ], + [ + "gene_synonym", + "fliG" + ] + ], + "dna_sequence": "ATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCACCTCTCCCAGCGTGAAGTACAAACCCTGAGCGCTGCAATGGCGAACGTCACGCAGATCTCCAACAAGCAGCTAACCGATGTGCTGGCGGAGTTTGAGCAAGAAGCTGAACAGTTTGCCGCACTGAATATCAACGCCAACGATTATCTGCGCTCGGTATTGGTCAAAGCTCTGGGTGAAGAACGTGCCGCCAGCCTGCTGGAAGATATTCTCGAAACTCGCGATACCGCCAGCGGTATTGAAACGCTCAACTTTATGGAGCCACAGAGCGCCGCCGATCTGATTCGCGATGAGCATCCGCAAATTATCGCCACCATTCTGGTGCATCTGAAGCGCGCCCAAGCCGCCGATATTCTGGCGTTGTTCGATGAACGTCTGCGCCACGACGTGATGTTGCGTATCGCCACCTTTGGCGGCGTGCAGCCAGCCGCGCTGGCGGAGCTGACCGAAGTACTGAATGGCTTGCTCGACGGTCAGAATCTCAAGCGCAGCAAAATGGGCGGCGTGAGAACGGCAGCCGAAATTATCAACCTGATGAAAACTCAGCAGGAAGAAGCCGTTATTACCGCCGTGCGTGAATTCGACGGCGAGCTGGCGCAGAAAATCATCGACGAGATGTTCCTGTTCGAGAATCTGGTGGATGTCGACGATCGCAGCATTCAGCGTCTGTTGCAGGAAGTGGATTCCGAATCGCTGTTGATCGCGCTGAAAGGAGCCGAGCAGCCACTGCGCGAGAAATTCTTGCGCAATATGTCGCAGCGTGCCGCCGATATTCTGCGCGACGATCTCGCCAACCGTGGTCCGGTGCGTCTGTCGCAGGTGGAAAACGAACAGAAAGCGATTCTGCTGATTGTGCGCCGCCTTGCCGAAACTGGCGAGATGGTAATTGGCAGCGGCGAGGATACCTATGTCTGA", + "dna_sequence_length": 996, + "functions": [ + "flagellar motor switching and energizing component" + ], + "id": "CDS_1927", + "location": [ + [ + "NC_000913", + 2014880, + "+", + 996 + ] + ], + "md5": "08a127b4cac1a2ea392d96023f80ef1a", + "parent_gene": "", + "protein_md5": "142007a5db6d956b34a72e96db840cdf", + "protein_translation": "MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006458" + ], + [ + "gene_synonym", + "ECK1938" + ], + [ + "gene_synonym", + "EcoGene:EG11656" + ], + [ + "gene_synonym", + "GI:90111357" + ], + [ + "gene_synonym", + "GeneID:946456" + ], + [ + "gene_synonym", + "JW1924" + ], + [ + "gene_synonym", + "NP_416450.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31068" + ], + [ + "gene_synonym", + "b1940" + ], + [ + "gene_synonym", + "flaAII.3" + ], + [ + "gene_synonym", + "flaBIII" + ], + [ + "gene_synonym", + "fliH" + ] + ], + "dna_sequence": "ATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAGGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAATGCAGGCCCATGAGCAAGGTTATCAGGCGGGTATTGCCGAAGGTCGCCAGCAAGGTCATAAGCAGGGCTATCAGGAAGGACTGGCCCAGGGGCTGGAGCAAGGTCTGGCAGAGGCGAAGTCTCAACAAGCGCCAATTCATGCCCGGATGCAGCAACTGGTCAGCGAATTTCAAACTACCCTTGATGCACTTGATAGTGTGATAGCGTCGCGCCTGATGCAGATGGCGCTGGAGGCGGCACGTCAGGTCATCGGTCAGACGCCAACGGTGGATAACTCGGCACTGATCAAACAGATCCAACAGTTGTTGCAGCAAGAACCGTTATTCAGCGGTAAACCACAGCTGCGCGTGCACCCGGATGATCTGCAACGTGTGGATGATATGCTCGGCGCTACCTTAAGTTTGCATGGCTGGCGCTTGCGGGGCGATCCCACCCTCCATCCTGGCGGCTGTAAAGTCTCCGCCGATGAAGGCGATCTCGACGCCAGTGTCGCCACTCGCTGGCAAGAACTCTGCCGTCTGGCAGCACCAGGAGTGGTGTAA", + "dna_sequence_length": 687, + "functions": [ + "negative regulator of FliI ATPase activity" + ], + "id": "CDS_1928", + "location": [ + [ + "NC_000913", + 2015868, + "+", + 687 + ] + ], + "md5": "067fb00657296a6b999f361c7e101b58", + "parent_gene": "", + "protein_md5": "710d46041478b541bd4b9efef95b3296", + "protein_translation": "MSDNLPWKTWTPDDLAPPQAEFVPIVEPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHKQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006460" + ], + [ + "gene_synonym", + "ECK1939" + ], + [ + "gene_synonym", + "EcoGene:EG20266" + ], + [ + "gene_synonym", + "GI:16129888" + ], + [ + "gene_synonym", + "GeneID:946457" + ], + [ + "gene_synonym", + "JW1925" + ], + [ + "gene_synonym", + "NP_416451.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52612" + ], + [ + "gene_synonym", + "b1941" + ], + [ + "gene_synonym", + "flaC" + ], + [ + "gene_synonym", + "fliI" + ] + ], + "dna_sequence": "ATGACCACGCGCCTGACTCGCTGGCTAACCACGCTGGATAACTTTGAAGCCAAAATGGCGCAGTTGCCTGCGGTACGTCGCTACGGGCGATTAACCCGCGCTACCGGGCTGGTGCTGGAAGCCACCGGATTACAATTGCCGCTCGGCGCAACCTGTGTCATTGAGCGCCAGAACGGCAGCGAAACGCACGAAGTAGAAAGCGAAGTCGTTGGCTTTAACGGTCAACGGCTGTTTTTAATGCCGCTGGAGGAAGTCGAAGGTGTCCTGCCCGGCGCGCGTGTTTATGCCAAAAACATTTCGGCAGAAGGGCTGCAAAGCGGCAAGCAGTTGCCGCTCGGTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGCACGCTCAGTGGTGATTGCCGCTCCGGCGGATGTTTCTCCGCTCCTGCGAATGCAGGGTGCCGCCTATGCCACGCGCATTGCCGAAGATTTTCGCGATCGTGGTCAGCATGTGTTGCTGATTATGGACTCCCTCACCCGCTACGCGATGGCCCAGCGTGAAATTGCGCTGGCGATTGGCGAACCCCCCGCCACCAAAGGTTATCCACCGTCGGTGTTTGCCAAATTACCGGCACTGGTCGAGCGTGCCGGAAATGGCATTAGCGGCGGCGGCTCGATTACCGCGTTTTATACCGTGCTCACTGAAGGCGATGACCAGCAGGATCCGATTGCCGACTCCGCGCGGGCGATCCTCGACGGTCACATTGTGCTGTCTCGCCGACTGGCGGAAGCCGGGCACTATCCGGCTATCGATATTGAAGCGTCGATCAGCCGCGCAATGACGGCGTTGATCAGTGAGCAACATTACGCGCGAGTGCGCACCTTCAAACAGCTGTTGTCGAGTTTTCAGCGTAACCGCGATCTGGTTAGCGTCGGCGCGTATGCCAAAGGCAGCGATCCGATGCTCGATAAAGCCATCGCCCTGTGGCCGCAGCTGGAGGGCTATTTGCAACAAGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCGACAGTGTCATAA", + "dna_sequence_length": 1374, + "functions": [ + "flagellum-specific ATP synthase" + ], + "id": "CDS_1929", + "location": [ + [ + "NC_000913", + 2016554, + "+", + 1374 + ] + ], + "md5": "8ca99a985419bc7bd9aeede6257ea75a", + "parent_gene": "", + "protein_md5": "6b83302f620c4a9aedf46505490d2c81", + "protein_translation": "MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLERIFPTVS", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006462" + ], + [ + "gene_synonym", + "ECK1940" + ], + [ + "gene_synonym", + "EcoGene:EG20267" + ], + [ + "gene_synonym", + "GI:16129889" + ], + [ + "gene_synonym", + "GeneID:946454" + ], + [ + "gene_synonym", + "JW1926" + ], + [ + "gene_synonym", + "NP_416452.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52613" + ], + [ + "gene_synonym", + "b1942" + ], + [ + "gene_synonym", + "flaO" + ], + [ + "gene_synonym", + "fliJ" + ] + ], + "dna_sequence": "ATGGCAGAACATGGTGCGCTGGCGACCCTGAAAGATCTGGCAGAAAAAGAGGTAGAGGATGCCGCGCGCCTGCTGGGTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAAGCCATTACTCAGCATCGCCAGCAACTTAATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGGCAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGA", + "dna_sequence_length": 444, + "functions": [ + "flagellar protein" + ], + "id": "CDS_1930", + "location": [ + [ + "NC_000913", + 2017946, + "+", + 444 + ] + ], + "md5": "8710beee076942e118859e008cf46103", + "parent_gene": "", + "protein_md5": "cb706f7a6ccb260924eae9f502dba8af", + "protein_translation": "MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRNNLNSDMSAGITSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006464" + ], + [ + "gene_synonym", + "ECK1941" + ], + [ + "gene_synonym", + "EcoGene:EG20268" + ], + [ + "gene_synonym", + "GI:16129890" + ], + [ + "gene_synonym", + "GeneID:946449" + ], + [ + "gene_synonym", + "JW1927" + ], + [ + "gene_synonym", + "NP_416453.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52614" + ], + [ + "gene_synonym", + "b1943" + ], + [ + "gene_synonym", + "flaE" + ], + [ + "gene_synonym", + "fliK" + ] + ], + "dna_sequence": "ATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCATTAGCAGGCGAGACAACTACCGACAAAGCGGCCCCCCAGTTGCTGGTGGCAACAGATAAGCCCACGACAAAAGGCGAGCCGCTGATCAGCGATATTGTTTCCGACGCGCAACAAGCTAATTTACTGATCCCTGTGGATGAAACACCGCCTGTCATCAACGACGAACAATCCACATCAACACCGTTAACCACCGCTCAGACGATGGCGTTGGCTGCGGTGGCTGACAAAAATACGACAAAAGACGAAAAAGCGGATGATCTGAATGAAGACGTCACCGCAAGCCTGAGCGCCCTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGCCACTGCCCACCGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATCAGCATGTACGCGCCGCCCTGGAAGCAGCGCTGCCGGTACTGCGCACGCAGCTGGCCGAAAGTGGCATTCAGTTAGGGCAAAGCAACATCAGTGGCGAAAGCTTTAGTGGTCAGCAGCAGGCCGCTTCCCAGCAACAGCAAAGCCAACGCACAGCAAACCATGAACCTCTGGCGGGGGAAGACGACGATACGCTTCCGGTTCCCGTCTCTTTACAAGGGCGTGTAACAGGCAACAGCGGCGTTGATATTTTCGCCTAA", + "dna_sequence_length": 1128, + "functions": [ + "flagellar hook-length control protein" + ], + "id": "CDS_1931", + "location": [ + [ + "NC_000913", + 2018386, + "+", + 1128 + ] + ], + "md5": "9ed199e1e70fe778de34907a2c4b79a0", + "parent_gene": "", + "protein_md5": "74707f15e3aaef9bf43e627eb700c391", + "protein_translation": "MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTKGEPLISDIVSDAQQANLLIPVDETPPVINDEQSTSTPLTTAQTMALAAVADKNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKPTLFTKLTSEQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTANHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006467" + ], + [ + "gene_synonym", + "ECK1942" + ], + [ + "gene_synonym", + "EcoGene:EG10322" + ], + [ + "gene_synonym", + "GI:16129891" + ], + [ + "gene_synonym", + "GeneID:946443" + ], + [ + "gene_synonym", + "JW1928" + ], + [ + "gene_synonym", + "NP_416454.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABX8" + ], + [ + "gene_synonym", + "b1944" + ], + [ + "gene_synonym", + "cheC1" + ], + [ + "gene_synonym", + "flaAI" + ], + [ + "gene_synonym", + "flaQI" + ], + [ + "gene_synonym", + "fliL" + ] + ], + "dna_sequence": "ATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGATTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCAACGCGTCGTGCCCTCACCGGTCTTCTACGCGCTGGATACCTTCACGGTCAATTTGGGCGATGCGGATCGCGTACTTTATATCGGCATAACCCTGCGCCTGAAAGATGAAGCTACCCGCTCGCGGCTGAGTGAGTATTTGCCGGAAGTCCGTAGTCGCTTGCTGTTACTGTTTTCGCGTCAGGATGCTGCCGTACTGGCGACAGAAGAAGGCAAGAAAAACCTGATTGCCGAGATTAAAACCACACTTTCCACCCCGCTTGTTGCCGGGCAACCGAAACAGGATGTCACCGACGTGCTGTATACCGCTTTTATTCTGCGATAA", + "dna_sequence_length": 465, + "functions": [ + "flagellar biosynthesis protein" + ], + "id": "CDS_1932", + "location": [ + [ + "NC_000913", + 2019618, + "+", + 465 + ] + ], + "md5": "535cb60a44310fa5ee0d785872df2ed2", + "parent_gene": "", + "protein_md5": "06fc43f4d8fe0d35237de79ebe9ef69b", + "protein_translation": "MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006469" + ], + [ + "gene_synonym", + "ECK1943" + ], + [ + "gene_synonym", + "EcoGene:EG10323" + ], + [ + "gene_synonym", + "GI:16129892" + ], + [ + "gene_synonym", + "GeneID:946442" + ], + [ + "gene_synonym", + "JW1929" + ], + [ + "gene_synonym", + "NP_416455.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06974" + ], + [ + "gene_synonym", + "b1945" + ], + [ + "gene_synonym", + "cheC2" + ], + [ + "gene_synonym", + "flaA" + ], + [ + "gene_synonym", + "flaAII" + ], + [ + "gene_synonym", + "flaQII" + ], + [ + "gene_synonym", + "fliM" + ] + ], + "dna_sequence": "ATGGGCGATAGTATTCTTTCTCAAGCTGAAATTGATGCGCTGTTGAATGGTGACAGCGAAGTCAAAGACGAACCGACAGCCAGTGTTAGCGGCGAAAGTGACATTCGTCCGTACGATCCGAATACCCAACGACGGGTTGTGCGCGAACGTTTGCAGGCGCTGGAAATCATTAATGAGCGCTTTGCCCGCCATTTTCGTATGGGGCTGTTCAACCTGCTGCGTCGTAGCCCGGATATAACCGTCGGGGCCATCCGCATTCAGCCGTACCATGAATTTGCCCGCAACCTGCCGGTGCCGACCAACCTGAACCTTATCCATCTGAAACCGCTGCGCGGCACTGGGCTGGTGGTGTTCTCACCGAGTCTGGTGTTTATCGCCGTGGATAACCTGTTTGGCGGCGATGGACGCTTCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAACCGCATGTTGAAACTGGCGCTTGAAGGCTATAGCGACGCCTGGAAGGCGATTAATCCGCTGGAAGTTGAGTACGTGCGTTCGGAAATGCAGGTGAAATTTACCAATATCACCACCTCGCCGAACGACATTGTGGTTAACACGCCGTTCCATGTGGAGATTGGCAACCTGACCGGCGAATTTAATATCTGCCTGCCATTCAGCATGATCGAGCCGCTACGGGAATTGTTGGTTAACCCGCCGCTGGAAAACTCGCGTAATGAAGATCAGAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGA", + "dna_sequence_length": 1005, + "functions": [ + "flagellar motor switching and energizing component" + ], + "id": "CDS_1933", + "location": [ + [ + "NC_000913", + 2020087, + "+", + 1005 + ] + ], + "md5": "f11ccd96d9aeead8d5951153022933f7", + "parent_gene": "", + "protein_md5": "a8ca0442ddcf144e9c1e7297a81f86d3", + "protein_translation": "MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLNPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006471" + ], + [ + "gene_synonym", + "ECK1944" + ], + [ + "gene_synonym", + "EcoGene:EG10324" + ], + [ + "gene_synonym", + "GI:16129893" + ], + [ + "gene_synonym", + "GeneID:946423" + ], + [ + "gene_synonym", + "JW1930" + ], + [ + "gene_synonym", + "NP_416456.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15070" + ], + [ + "gene_synonym", + "b1946" + ], + [ + "gene_synonym", + "fliN" + ], + [ + "gene_synonym", + "motD" + ] + ], + "dna_sequence": "ATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTGACCGTCGAGCTGGGCCGTACGCGGATGACCATCAAAGAGCTGTTGCGTCTGACGCAAGGGTCCGTCGTGGCGCTGGACGGTCTGGCGGGCGAACCACTGGATATTCTGATCAACGGTTATTTAATCGCCCAGGGCGAAGTGGTGGTCGTTGCCGATAAATATGGCGTGCGGATCACCGATATCATTACTCCGTCTGAGCGAATGCGCCGCCTGAGCCGTTAG", + "dna_sequence_length": 414, + "functions": [ + "flagellar motor switching and energizing component" + ], + "id": "CDS_1934", + "location": [ + [ + "NC_000913", + 2021088, + "+", + 414 + ] + ], + "md5": "f4211cbc10014b19c5e074295bb226f2", + "parent_gene": "", + "protein_md5": "c68bb0a3d146e7aff35a0b92b41740b4", + "protein_translation": "MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006473" + ], + [ + "gene_synonym", + "ECK1945" + ], + [ + "gene_synonym", + "EcoGene:EG11224" + ], + [ + "gene_synonym", + "GI:90111358" + ], + [ + "gene_synonym", + "GeneID:946458" + ], + [ + "gene_synonym", + "JW5316" + ], + [ + "gene_synonym", + "NP_416457.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22586" + ], + [ + "gene_synonym", + "b1947" + ], + [ + "gene_synonym", + "flbD" + ], + [ + "gene_synonym", + "fliO" + ] + ], + "dna_sequence": "ATGAATAACCACGCTACTGTGCAATCTTCCGCGCCGGTTTCTGCTGCGCCACTGCTGCAGGTGAGCGGCGCACTCATCGCCATTATTGCCCTGATCCTCGCTGCTGCCTGGCTGGTAAAACGGTTGGGATTTGCCCCTAAACGCACTGGCGTTAACGGTCTGAAAATTAGCGCCAGTGCTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCCCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGA", + "dna_sequence_length": 366, + "functions": [ + "flagellar biosynthesis protein" + ], + "id": "CDS_1935", + "location": [ + [ + "NC_000913", + 2021504, + "+", + 366 + ] + ], + "md5": "cfc611133ee71d31c31d3e3bf006cf78", + "parent_gene": "", + "protein_md5": "5d25848d824728a0365a39fb675cbc50", + "protein_translation": "MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006475" + ], + [ + "gene_synonym", + "ECK1946" + ], + [ + "gene_synonym", + "EcoGene:EG11975" + ], + [ + "gene_synonym", + "GI:16129895" + ], + [ + "gene_synonym", + "GeneID:946462" + ], + [ + "gene_synonym", + "JW1932" + ], + [ + "gene_synonym", + "NP_416458.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC05" + ], + [ + "gene_synonym", + "b1948" + ], + [ + "gene_synonym", + "flaR" + ], + [ + "gene_synonym", + "fliP" + ] + ], + "dna_sequence": "ATGCGTCGTTTATTGTCTGTCGCACCTGTCCTTCTCTGGCTGATTACGCCCCTCGCCTTCGCGCAACTGCCGGGTATCACCAGCCAGCCGCTGCCTGGCGGTGGACAAAGCTGGTCGCTCCCGGTGCAGACGCTGGTGTTCATCACCTCGTTGACGTTTATTCCGGCAATTTTACTGATGATGACCAGTTTCACCCGCATCATCATTGTTTTTGGTTTATTGCGTAACGCGCTGGGAACACCCTCCGCGCCACCTAACCAGGTATTGCTGGGGCTGGCACTGTTTTTGACCTTTTTTATTATGTCACCGGTGATCGACAAAATTTATGTAGATGCGTACCAGCCATTCAGCGAAGAGAAAATATCAATGCAGGAGGCGCTGGAAAAAGGGGCGCAGCCGCTGCGTGAGTTTATGCTGCGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGGTTCGCTGGCGCAGAGCTTTTACAGCTAG", + "dna_sequence_length": 738, + "functions": [ + "flagellar biosynthesis protein" + ], + "id": "CDS_1936", + "location": [ + [ + "NC_000913", + 2021869, + "+", + 738 + ] + ], + "md5": "9e2958510c60a6d73731c5b0611c4c49", + "parent_gene": "", + "protein_md5": "8ddbf52dcdb3fae25c201bda719dd28c", + "protein_translation": "MRRLLSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006477" + ], + [ + "gene_synonym", + "ECK1947" + ], + [ + "gene_synonym", + "EcoGene:EG11976" + ], + [ + "gene_synonym", + "GI:16129896" + ], + [ + "gene_synonym", + "GeneID:946463" + ], + [ + "gene_synonym", + "JW1933" + ], + [ + "gene_synonym", + "NP_416459.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC07" + ], + [ + "gene_synonym", + "b1949" + ], + [ + "gene_synonym", + "flaQ" + ], + [ + "gene_synonym", + "fliQ" + ] + ], + "dna_sequence": "ATGACACCTGAATCGGTCATGATGATGGGGACTGAAGCGATGAAAGTCGCGCTGGCACTGGCTGCCCCGCTATTGTTGGTAGCGTTGGTCACGGGCCTTATCATCAGTATTTTGCAGGCCGCCACGCAGATTAACGAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAG", + "dna_sequence_length": 270, + "functions": [ + "flagellar biosynthesis protein" + ], + "id": "CDS_1937", + "location": [ + [ + "NC_000913", + 2022616, + "+", + 270 + ] + ], + "md5": "9b99827ac229782964474e532a9feea7", + "parent_gene": "", + "protein_md5": "ad19a7639463b8497f82a7cafc7e6d6c", + "protein_translation": "MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006479" + ], + [ + "gene_synonym", + "ECK1948" + ], + [ + "gene_synonym", + "EcoGene:EG11977" + ], + [ + "gene_synonym", + "GI:16129897" + ], + [ + "gene_synonym", + "GeneID:946464" + ], + [ + "gene_synonym", + "JW1934" + ], + [ + "gene_synonym", + "NP_416460.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33135" + ], + [ + "gene_synonym", + "b1950" + ], + [ + "gene_synonym", + "flaP" + ], + [ + "gene_synonym", + "fliR" + ] + ], + "dna_sequence": "ATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCCCATCATTACCTGCCAACGATGTTCCTGTTTTTTCGTTCTTTGCTCTGTGGCTGGCCGTGCAGCAGATCCTGATCGGCATTGCGCTTGGTTTTACCATGCAATTTGCCTTTGCCGCTGTGCGAACCGCTGGCGAAATTATCGGTCTGCAAATGGGGCTGTCATTTGCGACGTTTGTCGATCCGGCCAGCCATCTTAATATGCCCGTTTTAGCGCGTATCATGGATATGCTGGCGTTACTGCTGTTCCTGACATTTAACGGTCATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGCCGATTGGTGGCGAACCGTTGAACAGCAATGCGTTTCTGGCACTCACCAAAGCAGGGAGTTTGATTTTCCTTAACGGGCTGATGCTGGCGTTACCGCTCATTACTCTGCTGCTGACACTGAATCTGGCATTAGGTTTACTTAATCGTATGGCCCCGCAATTATCCATTTTTGTTATTGGATTTCCATTAACTCTGACTGTCGGCATCTCTTTAATGGCGGCATTAATGCCGTTAATTGCACCTTTTTGCGAACATTTATTCAGTGAAATTTTTAATTTGCTGGCTGATATTATTAGTGAATTGCCATTAATATAA", + "dna_sequence_length": 786, + "functions": [ + "flagellar export pore protein" + ], + "id": "CDS_1938", + "location": [ + [ + "NC_000913", + 2022893, + "+", + 786 + ] + ], + "md5": "3116c31842e969c1b87c0f55a56f38af", + "parent_gene": "", + "protein_md5": "cdf73c6dcf78f0d6bf9c57115cdaf812", + "protein_translation": "MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006482" + ], + [ + "gene_synonym", + "ECK1949" + ], + [ + "gene_synonym", + "EcoGene:EG10820" + ], + [ + "gene_synonym", + "GI:16129898" + ], + [ + "gene_synonym", + "GeneID:946467" + ], + [ + "gene_synonym", + "JW1935" + ], + [ + "gene_synonym", + "NP_416461.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69405" + ], + [ + "gene_synonym", + "b1951" + ], + [ + "gene_synonym", + "cpsR" + ], + [ + "gene_synonym", + "rcsA" + ] + ], + "dna_sequence": "ATGTCAACGATTATTATGGATTTATGTAGTTACACCCGACTAGGTTTAACCGGGTATCTGTTGAGTAGAGGGGTTAAAAAAAGAGAAATCAACGACATTGAAACCGTTGATGACCTTGCCATAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGTTCTAAATCGATTAAACCGGAATCTCTCGACGATATCCTTGGCGATATTCTGAAAAAAGAGACAACGATAACCTCGTTTTTAAATATGCCGACGTTATCATTGAGCCGAACCGAATCGAGTATGTTGCGAATGTGGATGGCAGGTCAGGGAACCATTCAAATCTCTGACCAAATGAATATCAAAGCCAAGACCGTTTCATCGCATAAAGGTAATATTAAACGTAAGATCAAAACGCATAATAAACAGGTTATCTACCATGTCGTCCGACTGACGGATAATGTGACTAATGGTATTTTTGTCAACATGCGCTAA", + "dna_sequence_length": 624, + "functions": [ + "transcriptional regulator of colanic acid capsular biosynthesis" + ], + "id": "CDS_1939", + "location": [ + [ + "NC_000913", + 2023968, + "+", + 624 + ] + ], + "md5": "20e05c423727440ea029d1735d63de3b", + "parent_gene": "", + "protein_md5": "8ecb76ea0b2a41f48e0279621449b66a", + "protein_translation": "MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006484" + ], + [ + "gene_synonym", + "ECK1950" + ], + [ + "gene_synonym", + "EcoGene:EG12636" + ], + [ + "gene_synonym", + "GI:16129899" + ], + [ + "gene_synonym", + "GeneID:946468" + ], + [ + "gene_synonym", + "JW1936" + ], + [ + "gene_synonym", + "NP_416462.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEG8" + ], + [ + "gene_synonym", + "b1952" + ], + [ + "gene_synonym", + "dsrB" + ] + ], + "dna_sequence": "ATGAAGGTGAATGATCGGGTAACAGTCAAAACGGATGGCGGTCCGCGTCGTCCTGGCGTGGTACTGGCAGTTGAGGAGTTTAGTGAAGGCACAATGTACCTGGTTTCGCTGGAAGACTACCCGCTCGGCATCTGGTTCTTTAATGAAGCAGGGCATCAGGACGGTATCTTTGTGGAGAAAGCAGAGTAA", + "dna_sequence_length": 189, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1940", + "location": [ + [ + "NC_000913", + 2024823, + "-", + 189 + ] + ], + "md5": "31ddfd23f6836be1959289ef74b2c252", + "parent_gene": "", + "protein_md5": "5972148c0e82168c630cd5564dfe2049", + "protein_translation": "MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006488" + ], + [ + "gene_synonym", + "ECK1951" + ], + [ + "gene_synonym", + "EcoGene:EG14387" + ], + [ + "gene_synonym", + "GI:90111359" + ], + [ + "gene_synonym", + "GeneID:946469" + ], + [ + "gene_synonym", + "JW5317" + ], + [ + "gene_synonym", + "NP_416463.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64519" + ], + [ + "gene_synonym", + "b1953" + ], + [ + "gene_synonym", + "yodD" + ] + ], + "dna_sequence": "ATGAAAACCGCAAAAGAGTACAGCGATACCGCAAAACGTGAGGTCAGCGTCGATGTCGATGCCCTGCTGGCGGCGATCAATGAAATTAGCGAAAGCGAAGTTCATCGCAGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGA", + "dna_sequence_length": 228, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1941", + "location": [ + [ + "NC_000913", + 2024986, + "+", + 228 + ] + ], + "md5": "bf46642c2ff22093f162e32b658e9dee", + "parent_gene": "", + "protein_md5": "72e2520f273898f23d559569705062d9", + "protein_translation": "MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006493" + ], + [ + "gene_synonym", + "ECK1953" + ], + [ + "gene_synonym", + "EcoGene:EG14039" + ], + [ + "gene_synonym", + "GI:16129901" + ], + [ + "gene_synonym", + "GeneID:946472" + ], + [ + "gene_synonym", + "JW1938" + ], + [ + "gene_synonym", + "NP_416464.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76329" + ], + [ + "gene_synonym", + "b1955" + ], + [ + "gene_synonym", + "yedP" + ] + ], + "dna_sequence": "ATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGGTTTACCGCTGATTGCCGAAAATGGCGCAGTGATCCAGCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGTGCGCGCTTCTGGCACGTACTGGATGCTTCTGCCGGAAAAGATCAGGCTGCCAACTGGATTATCGCGACCTATCAACAATTGTCAGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAA", + "dna_sequence_length": 816, + "functions": [ + "putative mannosyl-3-phosphoglycerate phosphatase" + ], + "id": "CDS_1942", + "location": [ + [ + "NC_000913", + 2025511, + "+", + 816 + ] + ], + "md5": "4eb2f8e8d729e33e748dadb215765e92", + "parent_gene": "", + "protein_md5": "1687c17ee4de11b3e6c0b710eeee0895", + "protein_translation": "MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006495" + ], + [ + "gene_synonym", + "ECK1954" + ], + [ + "gene_synonym", + "EcoGene:EG14040" + ], + [ + "gene_synonym", + "GI:90111360" + ], + [ + "gene_synonym", + "GeneID:946471" + ], + [ + "gene_synonym", + "JW5832" + ], + [ + "gene_synonym", + "NP_416465.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76330" + ], + [ + "gene_synonym", + "b1956" + ], + [ + "gene_synonym", + "yedQ" + ] + ], + "dna_sequence": "GTGCAGCACGAGACAAAAATGGAAAACCAGAGCTGGTTGAAAAAACTCGCACGCCGCCTGGGGCCTGGTCATGTCGTTAATCTCTGCTTTATCGTGGTATTGCTTTTTTCCACCTTGCTCACCTGGCGTGAAGTGGTGGTGCTGGAAGATGCCTATATCTCCAGCCAGCGTAATCATCTGGAAAACGTTGCCAACGCGCTCGATAAGCATTTGCAGTATAACGTCGACAAACTGATCTTTTTACGTAATGGCATGCGCGAAGCTCTCGTAGCGCCACTGGATTTCACCTCTCTGCGTGATGCTGTAACCGAGTTCGAACAGCATCGCGACGAGCACGCCTGGAAAATCGAACTCAACCGACGACGCACTCTGCCAGTTAATGGTGTGTCGGATGCATTAGTCAGCGAGGGGAATCTCCTGTCTCGCGAAAATGAAAGCCTCGACAATGAAATTACCGCTGCACTGGAAGTTGGTTACTTGCTGCGACTAGCGCACAACTCCTCGTCGATGGTTGAACAGGCGATGTATGTCTCGCGTGCCGGATTTTACGTTTCGACGCAGCCGACCTTGTTTACGCGCAATGTTCCAACGCGTTATTACGGCTATGTCACCCAACCCTGGTTTATTGGCCATTCACAACGAGAAAATCGTCACCGCGCGGTACGCTGGTTCACTTCGCAACCGGAACACGCCAGCAATACTGAACCGCAGGTTACCGTCAGTGTTCCGGTAGACAGTAATAACTACTGGTATGGCGTGCTGGGGATGAGTATTCCCGTGCGTACTATGCAGCAATTTTTAAGAAACGCCATCGATAAAAACCTCGATGGTGAGTATCAGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGATCCTCGTGAACTGGCCTTGCTGGCGCAGGCAATGGAACATGACACGCGGGGCGGCATTCGTATGGACAGTCGCTATGTTAGCTGGGAACGTCTGGACCATTTCGACGGTGTGCTGGTGCGTGTCCATACGTTAAGCGAAGGCGTGCGCGGCGATTTCGGCAGTATCAGCATTGCATTAACCCTGCTGTGGGCGCTCTTTACCACCATGTTACTCATCTCCTGGTATGTGATTCGCCGGATGGTTAGCAACATGTATGTTCTGCAAAGCTCGTTGCAGTGGCAGGCGTGGCACGACACCTTAACGCGTTTATATAACCGTGGCGCACTGTTCGAAAAAGCCCGTCCGCTCGCTAAATTGTGTCAGACGCACCAACATCCTTTTTCTGTCATTCAGGTCGATCTTGACCATTTTAAAGCGATTAATGACCGCTTTGGTCATCAGGCGGGCGACCGTGTTCTTTCTCATGCTGCCGGATTAATTAGCAGTTCCTTGCGTGCGCAGGACGTTGCCGGGCGGGTCGGTGGTGAGGAGTTTTGTGTGATTCTGCCAGGCGCGAGTCTGACGGAGGCTGCGGAGGTCGCAGAACGTATTCGACTGAAATTAAATGAAAAAGAGATGTTGATCGCCAAGAGTACGACGATACGCATCAGTGCCTCGCTGGGGGTAAGCAGCAGCGAGGAAACCGGTGATTATGATTTTGAACAACTCCAGTCACTGGCCGACCGTCGGCTTTATCTCGCTAAACAGGCTGGGCGTAATCGGGTATTCGCGAGCGATAACGCTTAA", + "dna_sequence_length": 1695, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_1943", + "location": [ + [ + "NC_000913", + 2028017, + "-", + 1695 + ] + ], + "md5": "6d0ac748dbc98bcbaa4709c765a93869", + "parent_gene": "", + "protein_md5": "dfb05719311e347e3e251dfe957c3b39", + "protein_translation": "MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA", + "protein_translation_length": 564, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006498" + ], + [ + "gene_synonym", + "ECK1955" + ], + [ + "gene_synonym", + "EcoGene:EG14307" + ], + [ + "gene_synonym", + "GI:16129903" + ], + [ + "gene_synonym", + "GeneID:946466" + ], + [ + "gene_synonym", + "JW1940" + ], + [ + "gene_synonym", + "NP_416466.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64517" + ], + [ + "gene_synonym", + "b1957" + ], + [ + "gene_synonym", + "yodC" + ] + ], + "dna_sequence": "ATGAGCTTTATGGTTAGTGAGGAAGTTACGGTTAAAGAGGGCGGCCCGCGGATGATTGTCACTGGATACTCCAGCGGTATGGTTGAGTGTCGTTGGTATGACGGTTACGGGGTCAAGCGGGAAGCTTTTCATGAAACCGAGCTTGTTCCGGGGGAGGGGAGTCGTTCTGCGGAAGAAGTGTGA", + "dna_sequence_length": 183, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1944", + "location": [ + [ + "NC_000913", + 2028370, + "-", + 183 + ] + ], + "md5": "c543cbe4e0b3a8b36a0155ebbbecba36", + "parent_gene": "", + "protein_md5": "d2701625661e9ab22487ce301bc6f4de", + "protein_translation": "MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV", + "protein_translation_length": 60, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006500" + ], + [ + "gene_synonym", + "ECK1956" + ], + [ + "gene_synonym", + "EcoGene:EG12709" + ], + [ + "gene_synonym", + "GI:16129904" + ], + [ + "gene_synonym", + "GeneID:946465" + ], + [ + "gene_synonym", + "JW1941" + ], + [ + "gene_synonym", + "NP_416467.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46125" + ], + [ + "gene_synonym", + "b1958" + ], + [ + "gene_synonym", + "yedI" + ] + ], + "dna_sequence": "ATGCTTTTGGCCGGGAGTAGTTTACTGACGTTGCTCGATGATATCGCCACACTACTGGACGATATCTCCGTGATGGGCAAACTGGCGGCGAAGAAAACCGCCGGTGTATTAGGGGATGACTTATCGCTCAATGCGCAACAAGTTTCAGGCGTGCGGGCCAACCGGGAACTTCCCGTGGTCTGGGGCGTGGCGAAAGGATCGCTGATTAATAAAGTGATTCTGGTGCCGCTGGCGCTGATCATCAGTGCGTTTATCCCGTGGGCGATTACGCCTCTGTTGATGATTGGTGGCGCGTTTCTCTGCTTTGAAGGAGTAGAGAAAGTGCTGCATATGCTGGAGGCGCGTAAACATAAAGAAGATCCGGCGCAGAGCCAGCAGCGTCTGGAGAAGCTGGCGGCGCAGGATCCGCTGAAGTTTGAAAAGGACAAAATAAAAGGGGCGATTCGTACCGATTTTATATTGTCTGCGGAAATCGTCGCCATCACGCTGGGGATTGTGGCCGAAGCGCCGTTGCTTAATCAGGTGCTGGTGCTTTCAGGCATCGCGCTGGTAGTGACCGTGGGCGTCTACGGTCTGGTAGGGGTTATCGTTAAGATTGATGACCTGGGGTATTGGCTGGCGGAAAAATCCAGCGCGCTGATGCAGGCATTAGGTAAAGGGTTATTGATTATCGCGCCCTGGCTGATGAAAGCGTTATCGATTGTCGGCACGCTGGCGATGTTCCTCGTCGGCGGTGGGATTGTGGTACATGGAATTGCGCCGCTGCATCACGCCATTGAACATTTCGCCGGGCAGCAAAGTGCAGTAGTGGCGATGATATTACCGACTGTTTTAAATCTGATTCTTGGATTTATCATCGGCGGCATCGTGGTGCTGGGAGTGAAAGCCGTAGAGAAAATGCGCGGTCAGGCACATTAA", + "dna_sequence_length": 918, + "functions": [ + "DUF808 family inner membrane protein" + ], + "id": "CDS_1945", + "location": [ + [ + "NC_000913", + 2029366, + "-", + 918 + ] + ], + "md5": "a185cb4d1163665d763ada200aeebe80", + "parent_gene": "", + "protein_md5": "3cb5ad5b981e0e6ab0d4e7742a86aeb5", + "protein_translation": "MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006505" + ], + [ + "gene_synonym", + "ECK1957" + ], + [ + "gene_synonym", + "EcoGene:EG11141" + ], + [ + "gene_synonym", + "GI:16129905" + ], + [ + "gene_synonym", + "GeneID:946461" + ], + [ + "gene_synonym", + "JW1942" + ], + [ + "gene_synonym", + "NP_416468.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA70" + ], + [ + "gene_synonym", + "b1959" + ], + [ + "gene_synonym", + "yedA" + ] + ], + "dna_sequence": "ATGCGTTTCCGCCAGTTGTTACCGCTTTTTGGCGCGCTGTTTGCGTTGTATATCATTTGGGGCTCAACCTATTTTGTCATTCGGATTGGCGTGGAAAGCTGGCCTCCGTTAATGATGGCGGGCGTTCGATTCCTGGCAGCCGGTATTTTATTGCTGGCATTTTTGCTACTGCGCGGACACAAACTCCCCCCGCTACGTCCGCTGCTCAATGCCGCGCTGATTGGCCTGTTATTGCTGGCTGTCGGTAATGGCATGGTGACGGTTGCCGAACATCAAAATGTTCCTTCCGGCATCGCCGCCGTAGTGGTTGCAACCGTGCCCCTCTTTACCCTGTGCTTCAGCCGCCTGTTTGGCATTAAAACGCGCAAACTGGAATGGGTGGGTATTGCCATTGGGCTTGCCGGAATCATCATGCTCAATAGCGGTGGAAATTTAAGCGGCAATCCGTGGGGCGCGATTCTGATTTTAATCGGCTCGATTAGCTGGGCGTTTGGCTCAGTTTATGGCTCGCGCATTACCTTACCTGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGATCGCGTCGATGATTGCGGGTGAAAAACTGACGGCGCTCCCTTCCCTTTCAGGCTTCCTTGCGGTCGGCTATCTGGCGCTGTTTGGTTCGATTATCGCCATCAACGCTTATATGTATTTAATCCGTAATGTCAGTCCGGCTCTCGCCACCAGCTACGCTTACGTTAACCCGGTGGTCGCGGTCTTGCTGGGTACGGGACTGGGTGGAGAAACACTGTCGAAGATTGAATGGCTGGCGCTCGGCGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGTAA", + "dna_sequence_length": 921, + "functions": [ + "amino acid exporter for phenylalanine, threonine" + ], + "id": "CDS_1946", + "location": [ + [ + "NC_000913", + 2029539, + "+", + 921 + ] + ], + "md5": "326c598996319f13f4069a9b931977ea", + "parent_gene": "", + "protein_md5": "e463060f1d1389b4bb91f341fbe49000", + "protein_translation": "MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVIQDASSE", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006507" + ], + [ + "gene_synonym", + "ECK1958" + ], + [ + "gene_synonym", + "EcoGene:EG11068" + ], + [ + "gene_synonym", + "GI:16129906" + ], + [ + "gene_synonym", + "GeneID:946476" + ], + [ + "gene_synonym", + "JW1943" + ], + [ + "gene_synonym", + "NP_416469.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09184" + ], + [ + "gene_synonym", + "b1960" + ], + [ + "gene_synonym", + "vsr" + ] + ], + "dna_sequence": "ATGGCCGACGTTCACGATAAGGCCACTCGCAGCAAAAATATGCGCGCGATTGCCACGCGTGATACGGCGATAGAGAAGCGCCTCGCCAGTCTGTTAACCGGGCAGGGCCTGGCATTTCGCGTTCAGGACGCCAGTCTGCCCGGACGTCCGGATTTTGTCGTTGATGAATATCGCTGCGTGATATTTACCCATGGCTGCTTCTGGCATCATCATCACTGCTATCTGTTTAAAGTGCCTGCGACTCGAACCGAGTTCTGGCTGGAGAAGATAGGTAAAAATGTTGAGCGCGATCGCCGCGATATCAGTCGCTTGCAGGAACTCGGCTGGCGCGTATTGATTGTCTGGGAGTGCGCGTTACGTGGGCGCGAGAAGCTGACGGATGAAGCGCTTACCGAGCGTCTGGAAGAGTGGATCTGCGGCGAAGGTGCCAGCGCGCAGATCGACACGCAGGGGATTCATTTACTCGCTTGA", + "dna_sequence_length": 471, + "functions": [ + "DNA mismatch endonuclease of very short patch repair" + ], + "id": "CDS_1947", + "location": [ + [ + "NC_000913", + 2030918, + "-", + 471 + ] + ], + "md5": "38835cbd041fbbdab6c1c6e0aa33d462", + "parent_gene": "", + "protein_md5": "19aa71c30b8ed43655882964282d5077", + "protein_translation": "MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006509" + ], + [ + "gene_synonym", + "ECK1959" + ], + [ + "gene_synonym", + "EcoGene:EG10211" + ], + [ + "gene_synonym", + "GI:16129907" + ], + [ + "gene_synonym", + "GeneID:946479" + ], + [ + "gene_synonym", + "JW1944" + ], + [ + "gene_synonym", + "NP_416470.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AED9" + ], + [ + "gene_synonym", + "b1961" + ], + [ + "gene_synonym", + "dcm" + ], + [ + "gene_synonym", + "mec" + ] + ], + "dna_sequence": "ATGCAGGAAAATATATCAGTAACCGATTCATACAGCACCGGGAATGCCGCACAGGCAATGCTGGAGAAACTGCTGCAAATTTATGATGTTAAAACGTTGGTGGCGCAGCTTAATGGTGTAGGTGAGAATCACTGGAGCGCGGCAATTTTAAAACGTGCGCTGGCGAATGACTCGGCATGGCACCGTTTAAGTGAGAAAGAGTTCGCCCATCTGCAAACGTTATTACCCAAACCACCGGCACATCATCCGCATTATGCGTTTCGCTTTATCGATCTATTCGCCGGAATTGGCGGCATCCGTCGCGGTTTTGAATCGATTGGCGGACAGTGCGTGTTTACCAGCGAATGGAACAAACATGCGGTACGCACTTATAAAGCCAACCATTATTGCGATCCGGCGACGCATCATTTTAATGAAGATATCCGCGACATCACCCTCAGCCATAAAGAAGGCGTGAGTGATGAGGCGGCGGCGGAACATATTCGTCAACACATTCCTGAACACGATGTTTTACTGGCCGGTTTCCCTTGTCAGCCATTTTCGCTGGCTGGCGTATCGAAAAAGAACTCGCTCGGGCGGGCGCACGGTTTTGCCTGCGATACCCAGGGCACGCTGTTTTTTGATGTGGTACGCATTATCGACGCGCGTCGTCCGGCGATGTTTGTGCTCGAAAACGTCAAAAACCTGAAAAGTCACGACCAGGGTAAAACGTTCCGCATCATCATGCAGACGCTGGACGAACTGGGCTATGACGTGGCTGATGCAGAAGATAATGGGCCAGACGATCCGAAAATCATCGACGGCAAACATTTTCTGCCGCAGCACCGTGAACGCATCGTGCTGGTGGGTTTTCGTCGCGATCTGAATCTGAAAGCCGATTTTACCCTGCGTGATATCAGCGAATGTTTCCCTGCGCAGCGAGTGACGCTGGCGCAGCTGTTGGACCCGATGGTCGAGGCGAAATATATCCTGACGCCGGTGCTGTGGAAGTACCTCTATCGATATGCGAAAAAACATCAGGCGCGCGGTAACGGCTTCGGTTATGGAATGGTTTATCCGAACAATCCGCAAAGCGTCACGCGTACGCTGTCTGCGCGTTATTACAAAGATGGCGCGGAAATTTTAATCGATCGCGGCTGGGATATGGCCACGGGTGAGAAAGACTTTGACGATCCGCTGAATCAGCAACATCGTCCACGTCGGTTAACGCCTCGGGAATGCGCGCGCTTAATGGGTTTTGAAGCGCCGGGAGAAGCGAAATTCCGTATTCCGGTTTCGGACACTCAGGCCTATCGCCAGTTCGGTAACTCGGTGGTCGTGCCGGTCTTTGCCGCGGTGGCAAAACTGCTTGAGCCAAAAATCAAACAGGCGGTGGCGTTGCGTCAGCAAGAGGCACAACATGGCCGACGTTCACGATAA", + "dna_sequence_length": 1419, + "functions": [ + "DNA cytosine methyltransferase" + ], + "id": "CDS_1948", + "location": [ + [ + "NC_000913", + 2032317, + "-", + 1419 + ] + ], + "md5": "45caedae631c729b6f9b13baf57b17b5", + "parent_gene": "", + "protein_md5": "0a21ef64954bdb1c0fe155066f8b0c4c", + "protein_translation": "MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006512" + ], + [ + "gene_synonym", + "ECK1960" + ], + [ + "gene_synonym", + "EcoGene:EG12710" + ], + [ + "gene_synonym", + "GI:16129908" + ], + [ + "gene_synonym", + "GeneID:946478" + ], + [ + "gene_synonym", + "JW1945" + ], + [ + "gene_synonym", + "NP_416471.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46144" + ], + [ + "gene_synonym", + "b1962" + ], + [ + "gene_synonym", + "yedJ" + ] + ], + "dna_sequence": "ATGGACTTACAACACTGGCAGGCACAGTTCGAAAACTGGTTGAAAAACCATCATCAGCACCAGGACGCGGCCCATGACGTGTGTCATTTTCGCCGCGTCTGGGCTACGGCACAGAAGCTGGCGGCAGATGACGATGTCGATATGCTGGTGATTTTAACCGCCTGTTATTTTCACGATATTGTGAGCCTGGCGAAAAATCATCCGCAAAGGCAGCGTTCTTCAATCCTGGCGGCAGAAGAGACGCGTCGCCTGCTCCGTGAAGAGTTCGAGCAATTTCCGGCGGAGAAAATCGAGGCCGTTTGTCATGCCATTGCCGCTCACAGTTTCAGCGCGCAAATCGCCCCCTTAACAACGGAAGCTAAAATTGTCCAGGATGCGGATCGGCTGGAAGCCCTGGGGGCGATTGGCCTGGCGCGCGTGTTTGCCGTTTCAGGGGCATTGGGCGTGGCGCTGTTTGATGGTGAAGATCCGTTCGCACAGCATCGCCCGCTTGATGATAAACGCTACGCGCTGGATCATTTCCAGACTAAGTTGCTGAAGCTACCGCAAACCATGCAAACCGCAAGAGGCAAGCAGCTGGCGCAGCACAACGCGCATTTTTTAGTCGAGTTTATGGCGAAGCTCAGTGCCGAACTGGCGGGGGAGAATGAAGGTGTCGATCACAAGGTGATAGATGCGTTTTCATCCGCTGGCTGA", + "dna_sequence_length": 696, + "functions": [ + "putative HD superfamily phosphohydrolase" + ], + "id": "CDS_1949", + "location": [ + [ + "NC_000913", + 2033079, + "-", + 696 + ] + ], + "md5": "5919d8ee378ebdabaa52269b374189b9", + "parent_gene": "", + "protein_md5": "248ed06db18050e8d1cf0b1672869aac", + "protein_translation": "MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006514" + ], + [ + "gene_synonym", + "ECK1961" + ], + [ + "gene_synonym", + "EcoGene:EG14041" + ], + [ + "gene_synonym", + "GI:90111361" + ], + [ + "gene_synonym", + "GeneID:946477" + ], + [ + "gene_synonym", + "JW1946" + ], + [ + "gene_synonym", + "NP_416472.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76334" + ], + [ + "gene_synonym", + "b1963" + ], + [ + "gene_synonym", + "yedR" + ] + ], + "dna_sequence": "GTGGAAAAATGTGACTTTTATCACATAATAGTACTAAGTCTGAATTTTCCGGGTTATCTCAAAATGGAATACGGTTCGACAAAGATGGAAGAGAGACTCTCTCGCAGCCCTGGCGGCAAACTGGCTTTGTGGGCTTTCTATACATGGTGTGGCTATTTCGTCTGGGCAATGGCGCGTTACATCTGGGTGATGAGCCGGATTCCCGATGCCCCCGTGTCGGGATTTGAAAGCGATTTAGGCTCTACCGCGGGAAAGTGGTTAGGGGCACTGGTCGGATTTTTATTTATGGCTCTGGTCGGGGCATTGTTAGGCAGCATTGCCTGGTACACCCGACCTCGTCCCGCACGTAGCAGACGCTATGAATAA", + "dna_sequence_length": 366, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1950", + "location": [ + [ + "NC_000913", + 2033484, + "-", + 366 + ] + ], + "md5": "6098e89e934cb537984732f623018664", + "parent_gene": "", + "protein_md5": "2142ab084d12d186e27a89307577d32b", + "protein_translation": "MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006518" + ], + [ + "gene_synonym", + "ASAP:ABE-0006521" + ], + [ + "gene_synonym", + "ASAP:ABE-0006526" + ], + [ + "gene_synonym", + "ASAP:ABE-0285097" + ], + [ + "gene_synonym", + "ECK1962" + ], + [ + "gene_synonym", + "EcoGene:EG14042" + ], + [ + "gene_synonym", + "GeneID:2847763" + ], + [ + "gene_synonym", + "JW1948" + ], + [ + "gene_synonym", + "JW1949" + ], + [ + "gene_synonym", + "JW5319" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76335" + ], + [ + "gene_synonym", + "b4496" + ], + [ + "gene_synonym", + "yedS" + ], + [ + "gene_synonym", + "yedT" + ] + ], + "dna_sequence": "ATGAAAAGAAAAGTTCTGGCAATGCTGGTCCCGGCGTTATTAGTTGCTGGCGCAGCAAATGCGGCTGAAGTCTATAATAAAGATGGTAATAAACTGGATTTGTACGGAAAAGTAGTGGGTCTGCACTACTTCTCTGATGATTCTGGCAGCGATGGCGACATGTCATATGCCCGTATCGGTTTCAAAGGTGAAACTCAGATCGCTGATCAATTCACTGGTTATGGTCAGTGGGAATTTAACATTGGCGCAAACGGTCCTGAAAGCGACAAGGGTAATACCGCAACGCGTCTGGCATTTGCAGGTTTAGGCTTTGGTCAGAATGGTACTTTCGACTATGGTCGTAACTACGGTGTCGTATATGACGTAGAAGCATGGACCGATATGCTGCCAGAATTTGGTGGCGATACCTATGCTGGCGCTGACAACTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGTTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATTCAAACTCTGATCGTTCAGATCGTCAGGTTGGAGTTGGTTTAAATGATCGTAACCATAGCAACAGAAATGCTGGTGGTGAAACCGCTGAAGCATGGACTGTTGGTGCAAAATATGATGCTAATAATGTGTATTTAGCAGCTATGTACGCTGAAACTCGCAATATGACCCCATATGGTGGTGGCGAGTTTGATAATGGTGAATCAAGATCAGCCATCGCTAACAAAACCCAAAACTTTGAAGTTGTTGCTCAGTATCAGTTCGACTTTGGCCTGCGCCCGTCCATCGCTTACCTGCAATCTAAAGGTAAGGATTTAGGCGGTTGGGCTCATGACGGCAACGGCGACCCACGTTACACCAATAAAGATCTGGTTAAATACGTTGATATTGGTGCGACCTACTACTTCAACAAAAACATGTCCACCTATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAA", + "dna_sequence_length": 1194, + "id": "CDS_1951", + "location": [ + [ + "NC_000913", + 2034051, + "+", + 663 + ], + [ + "NC_000913", + 2034713, + "+", + 531 + ] + ], + "md5": "9e8d0f2dfe5b2633bcacf7d1811e7aac", + "parent_gene": "", + "protein_md5": "2cd0f042bf55ef5b3b4ae1692c9856dc", + "protein_translation": "MKRKVLAMLVPALLVAGAANAAEVYNKDGNKLDLYGKVVGLHYFSDDSGSDGDMSYARIGFKGETQIADQFTGYGQWEFNIGANGPESDKGNTATRLAFAGLGFGQNGTFDYGRNYGVVYDVEAWTDMLPEFGGDTYAGADNFMNGRANGVATYRNNGFFG", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006529" + ], + [ + "gene_synonym", + "ECK1963" + ], + [ + "gene_synonym", + "EcoGene:EG11755" + ], + [ + "gene_synonym", + "GI:16129913" + ], + [ + "gene_synonym", + "GeneID:946481" + ], + [ + "gene_synonym", + "JW1950" + ], + [ + "gene_synonym", + "NP_416476.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31658" + ], + [ + "gene_synonym", + "b1967" + ], + [ + "gene_synonym", + "gloC" + ], + [ + "gene_synonym", + "hchA" + ], + [ + "gene_synonym", + "yedU" + ], + [ + "gene_synonym", + "yzzC" + ] + ], + "dna_sequence": "ATGACTGTTCAAACAAGTAAAAATCCGCAGGTCGATATTGCTGAAGATAATGCATTCTTCCCTTCAGAATATTCGCTTAGCCAATATACCAGTCCTGTCTCTGATCTTGATGGCGTGGACTATCCAAAACCTTATCGCGGTAAACATAAAATTCTGGTGATCGCCGCGGACGAACGTTATTTGCCGACCGATAACGGAAAACTGTTCTCGACCGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAGTGGCGACCATTTCCGGTCTGATGACCAAGTTTGAATACTGGGCTATGCCGCACAAAGATGAAAAAGTAATGCCATTCTTTGAGCAGCATAAATCGTTGTTCCGCAATCCGAAGAAACTCGCGGATGTTGTTGCCAGCCTCAACGCTGATAGCGAATATGCAGCAATCTTTGTTCCTGGTGGTCATGGCGCACTTATTGGTTTACCTGAAAGCCAGGACGTGGCTGCCGCTTTACAGTGGGCAATCAAAAATGACCGTTTTGTTATCTCCCTTTGCCACGGCCCGGCGGCTTTTCTGGCGCTTCGCCACGGCGATAACCCACTGAATGGTTATTCCATTTGCGCATTCCCAGACGCCGCAGACAAACAAACGCCAGAGATTGGCTATATGCCGGGTCATCTCACCTGGTACTTCGGCGAAGAACTGAAGAAAATGGGCATGAATATCATTAATGACGACATCACCGGGCGAGTACATAAGGACCGTAAACTTCTCACCGGCGACAGTCCTTTTGCAGCGAATGCGTTGGGTAAACTGGCGGCGCAGGAAATGCTGGCAGCTTACGCGGGTTAA", + "dna_sequence_length": 852, + "functions": [ + "glyoxalase III and Hsp31 molecular chaperone" + ], + "id": "CDS_1952", + "location": [ + [ + "NC_000913", + 2035835, + "+", + 852 + ] + ], + "md5": "5c317ce51fa66664511958d3c9672534", + "parent_gene": "", + "protein_md5": "7494b152dbc6d95dabdd1b549511a731", + "protein_translation": "MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYAG", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006531" + ], + [ + "gene_synonym", + "ECK1964" + ], + [ + "gene_synonym", + "EcoGene:EG14044" + ], + [ + "gene_synonym", + "GI:16129914" + ], + [ + "gene_synonym", + "GeneID:946487" + ], + [ + "gene_synonym", + "JW1951" + ], + [ + "gene_synonym", + "NP_416477.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76339" + ], + [ + "gene_synonym", + "b1968" + ], + [ + "gene_synonym", + "yedV" + ] + ], + "dna_sequence": "ATGAAAAGACTATCTATAACCGTCCGTTTAACCTTGCTTTTTATATTGCTACTGTCTGTTGCTGGCGCCGGAATTGTCTGGACTCTCTATAATGGCCTGGCAAGTGAGTTGAAATGGCGCGATGATACAACACTCATTAACCGGACAGCGCAGATCAAGCAGTTGTTAATTGATGGGGTAAATCCAGATACGTTACCTGTGTACTTTAACCGGATGATGGATGTTAGTCAGGATATCTTGATTATTCATGGTGATAGCATCAATAAAATTGTTAACCGGACAAATGTCAGTGATGGCATGTTAAATAACATACCTGCTAGTGAGACAATCAGCGCAGCTGGCATTTACAGAAGCATTATTAATGATACAGAGATAGATGCTTTACGAATTAATATTGATGAAGTTTCGCCATCATTAACGGTTACTGTGGCTAAATTGGCTTCAGCCAGACATAACATGCTTGAACAGTATAAAATTAATAGCATTATAATTTGCATTGTCGCCATTGTACTTTGCTCAGTATTAAGTCCGCTGTTAATCAGAACGGGATTACGAGAGATCAAAAAGTTGAGTGGTGTAACGGAAGCGCTGAATTATAACGATAGCCGAGAGCCTGTTGAGGTTAGCGCATTACCGAGAGAACTAAAACCTCTTGGGCAGGCGTTGAATAAAATGCATCATGCTTTAGTCAAAGATTTTGAGCGTCTAAGTCAGTTTGCTGACGATCTCGCTCATGAACTTAGAACGCCAATTAATGCATTACTGGGTCAGAATCAGGTTACGCTCAGTCAAACCAGAAGTATCGCTGAATATCAAAAAACAATTGCCGGAAACATTGAAGAGCTGGAAAATATTTCGCGGTTAACAGAGAACATACTGTTTCTTGCCAGGGCAGATAAAAACAATGTTTTGGTGAAACTGGACTCGCTTTCTCTCAATAAGGAAGTCGAAAATTTGTTGGACTATCTTGAATACCTTTCAGACGAGAAAGAGATTTGCTTTAAGGTCGAGTGCAATCAGCAAATCTTTGCGGATAAAATTTTACTACAACGAATGTTATCGAATCTTATTGTTAATGCCATTAGATATTCGCCAGAAAAATCGCGTATTCATATAACCAGTTTTCTTGATACCAACAGCTATCTTAATATTGATATCGCCAGCCCTGGAACGAAAATTAATGAGCCTGAAAAACTCTTCCGTAGATTTTGGCGGGGAGATAATTCGCGTCATTCCGTAGGTCAGGGACTAGGCCTTTCTTTAGTCAAAGCGATTGCCGAATTGCATGGGGGAAGTGCTACGTATCACTATCTCAATAAGCATAATGTGTTCCGGATTACGTTACCGCAAAGAAATTAA", + "dna_sequence_length": 1359, + "functions": [ + "putative sensory kinase in two-component regulatory system with YedW" + ], + "id": "CDS_1953", + "location": [ + [ + "NC_000913", + 2038152, + "-", + 1359 + ] + ], + "md5": "01882760686a28fe9498311e543d41d3", + "parent_gene": "", + "protein_md5": "18c7987cb75b2f23cf979aa90c0e14f4", + "protein_translation": "MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQRN", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006533" + ], + [ + "gene_synonym", + "ECK1965" + ], + [ + "gene_synonym", + "EcoGene:EG14045" + ], + [ + "gene_synonym", + "GI:90111362" + ], + [ + "gene_synonym", + "GeneID:946486" + ], + [ + "gene_synonym", + "JW5322" + ], + [ + "gene_synonym", + "NP_416478.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76340" + ], + [ + "gene_synonym", + "b1969" + ], + [ + "gene_synonym", + "yedW" + ] + ], + "dna_sequence": "ATGAAGATTCTACTTATTGAAGATAATCAAAGGACCCAGGAATGGGTAACGCAGGGGCTTTCCGAAGCGGGTTATGTCATCGATGCCGTTTCTGATGGCAGAGATGGGCTTTATCTTGCGCTGAAGGATGATTATGCATTGATCATTCTGGATATTATGCTTCCGGGTATGGATGGCTGGCAGATCTTACAAACGTTAAGAACAGCAAAGCAAACCCCTGTTATTTGCCTTACTGCAAGGGATTCTGTCGATGACAGAGTCAGAGGGCTGGACAGTGGGGCAAATGATTATCTGGTAAAACCTTTTTCATTTTCTGAGTTGCTGGCAAGGGTTCGGGCACAATTAAGGCAACATCACGCTTTGAATTCAACATTAGAAATCAGCGGCTTAAGAATGGACTCTGTTAGTCATAGTGTGAGCAGGGACAATATCAGTATTACACTGACGCGCAAGGAGTTTCAGTTACTTTGGCTACTGGCCTCCAGAGCTGGCGAAATTATACCCAGAACGGTTATTGCGAGTGAAATTTGGGGAATCAACTTTGATAGTGATACCAATACGGTGGACGTCGCCATTCGCAGGCTCCGCGCAAAAGTTGATGATCCTTTTCCTGAAAAGCTAATTGCCACAATCCGGGGGATGGGCTATTCATTCGTAGCGGTAAAAAAATAA", + "dna_sequence_length": 672, + "functions": [ + "response regulator family protein" + ], + "id": "CDS_1954", + "location": [ + [ + "NC_000913", + 2038823, + "-", + 672 + ] + ], + "md5": "ec03b4de76f5e95a1f3869909905f90f", + "parent_gene": "", + "protein_md5": "26d05622b687de863da3942771cb0e6a", + "protein_translation": "MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006537" + ], + [ + "gene_synonym", + "ECK1966" + ], + [ + "gene_synonym", + "EcoGene:EG14046" + ], + [ + "gene_synonym", + "GI:16129916" + ], + [ + "gene_synonym", + "GeneID:946485" + ], + [ + "gene_synonym", + "JW1953" + ], + [ + "gene_synonym", + "NP_416479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76341" + ], + [ + "gene_synonym", + "b1970" + ], + [ + "gene_synonym", + "hiuH" + ], + [ + "gene_synonym", + "yedX" + ] + ], + "dna_sequence": "ATGTTAAAGCGTTATTTAGTACTCTCGGTAGCAACGGCAGCATTTTCATTACCTTCTTTGGTTAATGCCGCACAACAAAACATTCTTAGCGTGCACATTTTGAACCAGCAAACAGGAAAACCCGCTGCTGACGTGACAGTCACTCTTGAAAAGAAGGCGGATAACGGCTGGTTACAACTTAATACCGCCAAAACAGATAAGGATGGACGAATTAAGGCACTGTGGCCCGAGCAAACTGCAACTACGGGCGATTACCGTGTCGTATTTAAAACCGGGGACTATTTCAAGAAACAAAATCTTGAAAGTTTCTTCCCTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAA", + "dna_sequence_length": 414, + "functions": [ + "hydroxyisourate hydrolase" + ], + "id": "CDS_1955", + "location": [ + [ + "NC_000913", + 2038956, + "+", + 414 + ] + ], + "md5": "cbdb50cceaa9055e970b280e01c48e3d", + "parent_gene": "", + "protein_md5": "028be27ae600539f0174b34194ec47af", + "protein_translation": "MLKRYLVLSVATAAFSLPSLVNAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006540" + ], + [ + "gene_synonym", + "ECK1967" + ], + [ + "gene_synonym", + "EcoGene:EG14047" + ], + [ + "gene_synonym", + "GI:16129917" + ], + [ + "gene_synonym", + "GeneID:946484" + ], + [ + "gene_synonym", + "JW1954" + ], + [ + "gene_synonym", + "NP_416480.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76342" + ], + [ + "gene_synonym", + "b1971" + ], + [ + "gene_synonym", + "yedY" + ] + ], + "dna_sequence": "ATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGGTATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAACCGATCCATGGACACTGAAAATCAGCGGCGAAGTGGCAAAACCATTGACCCTCGATCATGATGACTTAACCCGTCGCTTCCCGCTGGAAGAGCGTATTTATCGTATGCGCTGCGTGGAAGCGTGGTCGATGGTGGTGCCGTGGATTGGTTTTCCGCTGCACAAATTGCTGGCGCTTGCCGAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAACCACCTGGAATCTGGCAGCGCCTGACGAATACGGTTTTTACGCCAACGTTAATCCGTATGTTGATCACCCGCGCTGGTCACAGGCTACCGAACGATTTATTGGTTCAGGCGGCATCCTCGATGTACAGCGCCAGCCAACGCTACTGTTTAATGGTTACGCCGCCCAGGTGGCATCGCTGTATCGTGGCCTGGATTTGCGGGAGAATTTCTAA", + "dna_sequence_length": 1005, + "functions": [ + "membrane-anchored, periplasmic TMAO, DMSO reductase" + ], + "id": "CDS_1956", + "location": [ + [ + "NC_000913", + 2039478, + "+", + 1005 + ] + ], + "md5": "ebdbe9e6810e6c234410e942669ec979", + "parent_gene": "", + "protein_md5": "f118713619a340d055cd25732e6b3651", + "protein_translation": "MKKNQFLKESDVTAESVFFMKRRQVLKALGISATALSLPHAAHADLLSWFKGNDRPPAPAGKALEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYANVNPYVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYAAQVASLYRGLDLRENF", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006542" + ], + [ + "gene_synonym", + "ECK1968" + ], + [ + "gene_synonym", + "EcoGene:EG14048" + ], + [ + "gene_synonym", + "GI:16129918" + ], + [ + "gene_synonym", + "GeneID:946483" + ], + [ + "gene_synonym", + "JW1955" + ], + [ + "gene_synonym", + "NP_416481.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76343" + ], + [ + "gene_synonym", + "b1972" + ], + [ + "gene_synonym", + "yedZ" + ] + ], + "dna_sequence": "ATGCGTCTGACAGCAAAACAGGTGACATGGCTGAAAGTTTGCCTGCATCTTGCCGGATTGTTGCCGTTTCTCTGGCTGGTCTGGGCGATCAATCACGGTGGACTGGGTGCCGATCCGGTGAAAGATATTCAGCATTTTACTGGTCGCACTGCACTGAAATTTTTGCTGGCGACCTTGTTAATCACCCCTCTGGCACGCTACGCAAAACAGCCGTTATTGATACGCACTCGCCGCCTGTTAGGATTATGGTGCTTTGCCTGGGCGACACTGCATTTAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGTTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGTATTATCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACTGCTTTTAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAA", + "dna_sequence_length": 636, + "functions": [ + "inner membrane heme subunit for periplasmic YedYZ reductase" + ], + "id": "CDS_1957", + "location": [ + [ + "NC_000913", + 2040483, + "+", + 636 + ] + ], + "md5": "a2cff9751cdf2a869221b7632d5dbe9e", + "parent_gene": "", + "protein_md5": "13b9f39d8eb471e07abed1c450160993", + "protein_translation": "MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006546" + ], + [ + "gene_synonym", + "ECK1969" + ], + [ + "gene_synonym", + "EcoGene:EG14049" + ], + [ + "gene_synonym", + "GI:16129919" + ], + [ + "gene_synonym", + "GeneID:946480" + ], + [ + "gene_synonym", + "JW1956" + ], + [ + "gene_synonym", + "NP_416482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76344" + ], + [ + "gene_synonym", + "b1973" + ], + [ + "gene_synonym", + "yodA" + ], + [ + "gene_synonym", + "zinT" + ] + ], + "dna_sequence": "TTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGATGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCATAGAAATAATGAAACAACATCGTGTAAATATGATTACGATGGATACAAAATACTCACCTATAAATCAGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGCAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCACAGCAATCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAAATGATGTCTCATTGA", + "dna_sequence_length": 651, + "functions": [ + "zinc and cadmium binding protein, periplasmic" + ], + "id": "CDS_1958", + "location": [ + [ + "NC_000913", + 2041375, + "+", + 651 + ] + ], + "md5": "005b1cce0789bd5d35607a182756ab2d", + "parent_gene": "", + "protein_md5": "0e2b87ec2c1d651ec955080831bc8690", + "protein_translation": "MAIRLYKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006552" + ], + [ + "gene_synonym", + "ECK1970" + ], + [ + "gene_synonym", + "EcoGene:EG14050" + ], + [ + "gene_synonym", + "GI:90111363" + ], + [ + "gene_synonym", + "GeneID:946491" + ], + [ + "gene_synonym", + "JW5323" + ], + [ + "gene_synonym", + "NP_416483.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76345" + ], + [ + "gene_synonym", + "b1974" + ], + [ + "gene_synonym", + "yodB" + ] + ], + "dna_sequence": "ATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAATGAAAGCGGCTTCGCTAATGCACATCATGCTTTATATAACCTTCCTTGCACTTCCTCTGCTGGGGATTGCTTTGATGGCTTACAGTGGAAAATCGTGGAGTTTCCTTGGTTTCAATGTGTCTCCCTTTGTTACCCCAAACAGCGAAATTAAAGCACTGATAAAAAATATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAA", + "dna_sequence_length": 531, + "functions": [ + "cytochrome b561 homolog" + ], + "id": "CDS_1959", + "location": [ + [ + "NC_000913", + 2042368, + "+", + 531 + ] + ], + "md5": "a22aead1533e7adc2e25696cc663abd7", + "parent_gene": "", + "protein_md5": "f63325d1b682a48571ce979a37c9c1ae", + "protein_translation": "MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006558" + ], + [ + "gene_synonym", + "ECK1972" + ], + [ + "gene_synonym", + "EcoGene:EG13377" + ], + [ + "gene_synonym", + "GI:90111364" + ], + [ + "gene_synonym", + "GeneID:946489" + ], + [ + "gene_synonym", + "JW1958" + ], + [ + "gene_synonym", + "NP_416484.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76346" + ], + [ + "gene_synonym", + "b1976" + ], + [ + "gene_synonym", + "mtfA" + ], + [ + "gene_synonym", + "yeeI" + ] + ], + "dna_sequence": "ATGATTAAGTGGCCCTGGAAAGTACAAGAATCAGCACATCAAACTGCCCTTCCCTGGCAGGAAGCACTATCGATCCCCCTTTTAACGTGTCTGACGGAACAGGAACAAAGCAAATTAGTCACTCTTGCCGAACGTTTTTTACAGCAAAAGCGGCTTGTTCCTTTACAGGGCTTTGAACTGGATTCATTAAGAAGCTGCCGGATAGCACTTCTATTTTGCCTACCCGTTCTGGAGTTAGGACTGGAATGGCTGGATGGTTTTCATGAAGTCTTAATTTATCCTGCGCCATTTGTGGTCGATGATGAATGGGAAGACGATATCGGTCTGGTGCATAACCAACGTATTGTTCAGTCAGGTCAGAGCTGGCAGCAAGGGCCTATCGTTTTGAACTGGTTGGATATACAAGATTCTTTTGATGCTTCTGGTTTTAACCTGATTATTCATGAAGTCGCTCATAAGCTGGACACCCGTAACGGCGATCGCGCCAGCGGAGTTCCCTTTATTCCGTTGCGTGAGGTTGCTGGCTGGGAACACGATCTTCATGCTGCAATGAACAACATTCAGGAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCAGCCAGCGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCAGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAA", + "dna_sequence_length": 798, + "functions": [ + "anti-repressor for DgsA(Mlc)" + ], + "id": "CDS_1960", + "location": [ + [ + "NC_000913", + 2043651, + "+", + 798 + ] + ], + "md5": "20f49bce1b9cbcf2d324ebfc75d41dad", + "parent_gene": "", + "protein_md5": "b6424b2fd8a2a7154cf2fe3b6d9e67f5", + "protein_translation": "MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006563" + ], + [ + "gene_synonym", + "ECK1974" + ], + [ + "gene_synonym", + "EcoGene:EG13378" + ], + [ + "gene_synonym", + "GI:145698281" + ], + [ + "gene_synonym", + "GeneID:946498" + ], + [ + "gene_synonym", + "JW5833" + ], + [ + "gene_synonym", + "NP_416485.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76347" + ], + [ + "gene_synonym", + "b1978" + ], + [ + "gene_synonym", + "yeeJ" + ] + ], + "dna_sequence": "ATGGCTACGAAGAAGAGAAGTGGAGAAGAAATAAATGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCGGCAAATATGGCGCGTGGATGGGCCTCTTCTCAGGCTTCAGGCGCAATGACAGACTGGTTAAGCCGCTTCGGTACCGCAAGAATCACGCTGGGCGTGGATGAAGATTTTAGCCTGAAGAACTCCCAGTTCGATTTTCTCCATCCGTGGTATGAAACGCCTGATAATCTCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCCGGCATTGGCGCGGAGTACTGGCGCGACTATCTAAAATTAAGCAGTAACGGCTATTTGCGACTGACCAACTGGCGCAGCGCACCTGAACTGGACAACGATTATGAAGCACGCCCGGCCAATGGCTGGGATGTACGCGCAGAAAGCTGGCTACCCGCCTGGCCGCACCTTGGCGGTAAACTGGTCTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTATACCCCCTTCCCGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGCAGCGCAATGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTGGCACGCTGACGCTGATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGACATTATCTGCCAGCAATAATGGTGTGCTCGCCAATGAGAATGCAGCAAACACCGTCTCGGTCAATGTCGCTGATGAAGGAAGCAACCCAATCAATGATCATACCGTCACGTTTGCGGTATTAAGCGGATCGGCAACTTCCTTCAACAATCAAAACACCGCAAAAACGGATGTTAATGGTCTGGCGACTTTTGATCTGAAAAGTAGTAAGCAGGAAGACAACACGGTTGAAGTCACCCTTGAAAATGGCGTGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTACGGCCTCTGTGAGCTCTGGTTCCCAGGCTAATCAACAGGTGAATTTTATCGGTGATCAAAGTACTGCTGCCCTGACCCTCAGTGTGCCTTCAGGTGATATCACCGTCACCAACACAGCTCCGCAATATATGACTGCAACCTTGCAGGATAAAAATGGCAACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTGGCGGGGATAACGGTAAACTTCACCATGCCACAGGACGTTGCGGCAAACTTTACCCTTGAAAATAACGGTATTGCCATCACTCAGGCCAATGGGGAAGCGCATGTCACGCTGAAAGGTAAAAAAGCGGGCACGCATACGGTTACCGCAACGCTGGGTAATAACAATACCAGTGATTCGCAGCCGGTAACATTTGTGGCGGACAAAGCCTCGGCTCAGGTTGTCCTGCAGATATCAAAAGATGAGATCACAGGTAATGGCGTCGATAGCGCAACGCTAACTGCAACGGTTAAAGATCAGTTCGACAATGAGGTGAATAATCTTCCGGTAACATTCAGCTCAGCCTCTTCAGGACTCACCCTGACCCCGGGAGTAAGTAATACCAACGAGTCTGGCATCGCGCAGGCCACTCTCGCAGGCGTTGCCTTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGAACGAACAGGGTAAGGCTACCGTCACTTATACCAATACCCGCTCCTCGATAGAATCAGGAGCGAGACCGGATACCGTTGAGGCCAGTCTGGAAAATGGTAGCTCCACGCTTAGCACATCAATTAATGTCAACGCTGATGCGTCTACGGCACATCTCACCTTGCTACAGGCACTTTTTGATACAGTCTCCGCAGGCGAGACAACCAGTCTGTATATTGAGGTGAAGGATAATTACGGCAACGGTGTCCCCCAGCAGGAGGTAACCCTCAGCGTTTCACCAAGTGAAGGCGTGACCCCCAGTAATAACGCTATATATACTACCAACCACGACGGCAATTTTTACGCAAGCTTTACCGCTACAAAAGCCGGGGTTTATCAATTGACGGCAACCCTCGAAAATGGCGATTCGATGCAACAAACAGTGACCTATGTGCCGAACGTCGCGAATGCTGAAATCACGCTGGCAGCCTCGAAGGATCCGGTGATTGCCGACAATAACGATCTCACGACACTAACAGCAACAGTCGCTGATACAGAGGGCAATGCGATAGCCAACACTGAGGTAACATTTACTCTGCCGGAAGATGTGAAGGCGAACTTCACGCTGAGCGATGGCGGTAAAGTGATTACTGATGCTGAAGGCAAAGCGAAAGTCACGCTGAAAGGTACAAAAGCAGGCGCTCATACTGTTACAGCATCGATGACTGGCGGTAAGAGTGAGCAGTTGGTGGTGAACTTTATTGCGGATACGCTCACTGCGCAGGTTAATCTTAACGTTACCGAGGACAATTTTATCGCTAATAACGTCGGGATGACCAGGCTGCAGGCAACAGTGACTGATGGAAACGGCAACCCGTTAGCCAATGAGGCGGTGACATTCACGCTACCGGCAGATGTGAGCGCAAGCTTTACTCTCGGACAAGGCGGTTCCGCCATTACTGATATCAACGGCAAGGCTGAAGTTACACTGAGCGGTACAAAATCCGGCACCTACCCCGTGACAGTTAGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACAGTTTCAGCCTCTCTGGCAGATAAACCTACTGAAGTCATCTCGCGATTACTGAATGCCAGTGCAGATGTTAATTCTGCGACGATTACCAGTCTGGAGATACCGGAAGGTCAGGTAATGGTCGCACAAGACGTAGCAGTTAAAGCTCACGTTAACGACCAGTTTGGCAACCCGGTTGCGCATCAACCCGTGACATTCAGTGCAGAGCCATCCTCGCAAATGATCATCAGCCAGAATACGGTCTCTACTAATACGCAGGGTGTAGCCGAGGTCACCATGACGCCCGAAAGAAACGGTTCGTATATGGTGAAAGCATCCCTGCCGAATGGAGCCTCACTTGAGAAACAACTGGAGGCTATTGATGAAAAACTGACACTCACGGCGTCCAGTCCGCTTATCGGTGTCTATGCCCCTACAGGCGCTACTCTGACGGCAACGCTAACCTCTGCAAATGGCACTCCAGTGGAGGGTCAGGTCATCAACTTTAGCGTAACGCCAGAAGGGGCGACGTTAAGTGGCGGAAAAGTGAGAACTAACTCTTCAGGTCAGGCTCCAGTCGTTTTGACCAGCAATAAAGTCGGTACATATACGGTGACTGCATCTTTCCATAACGGCGTAACAATACAGACACAGACAACCGTGAAAGTCACTGGCAACTCAAGCACCGCCCATGTTGCTAGCTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGGAATGCAAACAGTAGATATAACGCTGGTGGCTGGCCCGGCAGACACCTCGCAGTCCGTCCTTAAGAGCAATCGGTCATCACTGAAAGGGGACTATACCGATAGTGCTGAATTACGTCTTGTTCTGCACGATATATCAGGCAATCCGATCAAAGTTTCTGAAGGGATGGAATTTGTGCAATCAGGTACTAACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATGACAACTTTGCCCCAGGAAAAACGGCGGCTGATTATGAGTTTTCAAGCTCTGCCTCCTGGGTCGATGTTGATGCTACCGGTAAAGTGACATTTAAAAATGTCGGCAGCAATTCGGAAAGGATTACGGCGACGCCAAAATCAGGAGGCCCTAGCTATGTATACGAAATCCGTGTGAAGAGTTGGTGGGTGAACGCCGGCGAGGCTTTCATGATATACAGCCTTGCTGAAAATTTTTGCAGCAGCAATGGCTACACGCTCCCCAGAGCAAACTATTTAAACCACTGTAGTTCCCGAGGCATCGGGTCACTGTACAGTGAATGGGGAGATATGGGGCATTACACGACTGACGCTGGTTTTCAATCAAATATGTATTGGTCATCTAGTCCCGCAAACTCAAGCGAACAATACGTAGTTTCCCTGGCAACAGGTGATCAAAGCGTATTTGAAAAGCTTGGGTTTGCTTATGCGACATGTTATAAAAACCTGTGA", + "dna_sequence_length": 7077, + "functions": [ + "putative adhesin" + ], + "id": "CDS_1961", + "location": [ + [ + "NC_000913", + 2044938, + "+", + 7077 + ] + ], + "md5": "65842eabfd3787e7c389fd6ad2c53add", + "parent_gene": "", + "protein_md5": "ebe9ca2733ca0276efc28ac7d5b9b0fb", + "protein_translation": "MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAAAQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTFARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQAANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLFFSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAVVNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGNDSVTMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYRVTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQYMTATLQDKNGNPLKDKEITFSVPNDVASKFSISNGGKGMTDSNGVAIASLTGTLAGTHMIMARLANSNVSDAQPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFVADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIELAPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTNEQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALFDTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASFTATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTEVTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTASMTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTFTLPADVSASFTLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIADAGTAKLASLTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEILVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVKAHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKASLPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSVTPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAHVASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNGIATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGDYTDSAELRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTGGGEGIATLIPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFAPGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSYVYEIRVKSWWVNAGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDMGHYTTDAGFQSNMYWSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL", + "protein_translation_length": 2358, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006565" + ], + [ + "gene_synonym", + "ASAP:ABE-0006568" + ], + [ + "gene_synonym", + "ASAP:ABE-0285098" + ], + [ + "gene_synonym", + "ECK1975" + ], + [ + "gene_synonym", + "EcoGene:EG13380" + ], + [ + "gene_synonym", + "GeneID:2847764" + ], + [ + "gene_synonym", + "JW1961" + ], + [ + "gene_synonym", + "JW5325" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76349" + ], + [ + "gene_synonym", + "b4497" + ], + [ + "gene_synonym", + "yeeK" + ], + [ + "gene_synonym", + "yeeL" + ] + ], + "dna_sequence": "ATGTTTTTAGCATCATTGTTGAGACGTATTGCATTTAGTTACTACGATTATAAAGCTTATAATTTCAATATTGAAAAAACAGACTTTGTTGTCATCCATATTCCCGATCAGATTGGCGATGCTATGGCCATCTTTCCTGTTATTCGGGCGCTTGAATTGCATAAAATTAAGCATCTTTTAATTGTAACGTCGACAATTAATTTAGAAGTCTTTAATGCGCTTAAACTTGAACAGACTAAATTAACATTAGTCACAATGACTATGCAGGATCACGCAACATTAAAAGAAATAAAAGATTTAGCAAAGAACATAACACAGCAATACGGTACGCCGGATCTTTGCATTGAGGGGATGCGTAAAAAGAACCTGAAAACGATGTTATTTATCAGTCAGTTGAAAGCAAAAACGAATTTTCAGGTTGTTGGTATAACCATGAATTGCTTCTCCCCTTTGTGCAAGAACGCGTCCAGTATGGATCAGAAACTCCGGGCTCCCGTACCTATGACATGGGCATTTATGATGCGTGAGGCGGGTTTTCCAGCAGTCAGGCCAATATATGAATTGCCACTAAGTGAGGATGTACTCGATGAGGTGCGCGAGGAAATGCGATCGTTAGGATCTTACATTGCGTTCAATTTAGAAGGTAGCTCGCAGGAACGTACATTTTCATTATCGATTGCAGAAAATCTAATAGCAAAAATTTAAAGTGAAACAGATATACCAATAGTGATCGTTCATGGACCCAAAGGTGAAGATAAAGCCAGGGCATTAGTGGATTGTTATAATAATGTCTACCGTTTATCCTTACCACCCTCGATTAAACGTTCAGCAGCAATCATAAAAGATGCTTATATCGCAATAACTCCTGACACCTCAATATTACATATGGCAAGTGCCTATAATACCCCTGTTGTTGCAATTTATGCTGATTACAAAACGCGATGGCCCGCAATGGCCGATGTCTCGGAGTCAGTCGTCGTTGGGCAAAAAATTGACAATATAAGTCTGGATGAATTCGCAAAGGCATTAAAAAGTGTTTTGGCGAGAATATGA", + "dna_sequence_length": 1053, + "id": "CDS_1962", + "location": [ + [ + "NC_000913", + 2053328, + "-", + 1053 + ] + ], + "md5": "b3ec2a7c08ccaa5ea01b2b8277a4e05b", + "parent_gene": "", + "protein_md5": "84b51356060b14938d3c6f976e1fdb75", + "protein_translation": "MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLLIVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEGMRKKNLKTMLFISQLKAKTNFQVVGITMNCFSPLCKNASSMDQKLRAPVPMTWAFMMREAGFPAVRPIYELPLSEDVLDEVREEMRSLGSYIAFNLEGSSQERTFSLSIAENLIAKI", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006572" + ], + [ + "gene_synonym", + "ECK1976" + ], + [ + "gene_synonym", + "EcoGene:EG20205" + ], + [ + "gene_synonym", + "GI:16129925" + ], + [ + "gene_synonym", + "GeneID:946495" + ], + [ + "gene_synonym", + "JW1962" + ], + [ + "gene_synonym", + "NP_416488.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76350" + ], + [ + "gene_synonym", + "b1981" + ], + [ + "gene_synonym", + "shiA" + ], + [ + "gene_synonym", + "yeeM" + ] + ], + "dna_sequence": "ATGGACTCCACGCTCATCTCCACTCGTCCCGATGAAGGGACGCTTTCGTTAAGTCGCGCCCGACGAGCTGCGTTAGGCAGCTTCGCTGGTGCCGTCGTCGACTGGTATGATTTTTTACTCTATGGCATCACCGCCGCACTGGTGTTTAATCGCGAGTTTTTCCCGCAAGTAAGCCCGGCGATGGGAACGCTCGCCGCATTTGCTACCTTTGGCGTCGGATTTCTTTTCCGTCCGCTCGGCGGTGTCATTTTCGGTCACTTTGGCGACCGACTGGGACGTAAGCGCATGTTAATGCTGACCGTCTGGATGATGGGCATCGCGACAGCCTTGATTGGTATTCTTCCTTCATTCTCGACCATTGGGTGGTGGGCACCTATTTTGCTGGTGACACTGCGTGCCATTCAGGGATTTGCAGTCGGCGGCGAATGGGGAGGCGCGGCGTTGCTTTCCGTTGAAAGTGCACCGAAAAATAAAAAAGCCTTTTACAGTAGCGGTGTACAAGTTGGCTACGGTGTAGGTTTACTGCTTTCAACCGGACTGGTTTCATTGATCAGTATGATGACGACTGACGAACAGTTTTTAAGCTGGGGCTGGCGCATTCCTTTCCTGTTTAGCATCGTACTGGTACTGGGAGCATTGTGGGTGCGCAATGGCATGGAGGAGTCCGCGGAATTTGAACAACAGCAACATTATCAAGCTGCCGCGAAAAAACGCATCCCGGTTATCGAAGCGCTGTTACGACATCCCGGTGCTTTCCTGAAGATTATTGCGCTACGACTGTGCGAATTGCTGACGATGTACATCGTTACTGCCTTTGCACTTAATTATTCAACCCAGAATATGGGGCTACCGCGCGAACTTTTCCTTAATATTGGTTTGCTGGTAGGTGGATTAAGCTGCCTGACAATTCCCTGTTTTGCCTGGCTTGCCGATCGTTTTGGTCGCCGTAGGGTTTATATCACAGGTACGTTAATCGGAACGTTGAGCGCATTTCCTTTCTTTATGGCGCTTGAAGCACAATCTATTTTCTGGATAGTTTTCTTCTCCATAATGCTGGCAAACATTGCGCATGACATGGTGGTGTGTGTGCAACAACCGATGTTTACCGAAATGTTTGGTGCCAGTTATCGCTATAGTGGCGCTGGAGTCGGTTATCAGGTTGCCAGTGTGGTTGGCGGTGGATTTACACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGA", + "dna_sequence_length": 1317, + "functions": [ + "shikimate transporter" + ], + "id": "CDS_1963", + "location": [ + [ + "NC_000913", + 2053643, + "+", + 1317 + ] + ], + "md5": "249c0c86c5835666039cb20a319348b3", + "parent_gene": "", + "protein_md5": "5b282db12288b928e45fdf9f03e3f0b6", + "protein_translation": "MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLMKDSQRA", + "protein_translation_length": 438, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006579" + ], + [ + "gene_synonym", + "ECK1977" + ], + [ + "gene_synonym", + "EcoGene:EG10039" + ], + [ + "gene_synonym", + "GI:16129926" + ], + [ + "gene_synonym", + "GeneID:946508" + ], + [ + "gene_synonym", + "JW1963" + ], + [ + "gene_synonym", + "NP_416489.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE12" + ], + [ + "gene_synonym", + "amn" + ], + [ + "gene_synonym", + "b1982" + ] + ], + "dna_sequence": "ATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGTCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTTTCGTTCGTATCTTAATGAACAACTTACGTTGCTGTATCAGGATTATGGTGCGCATATCTCAGTGCAACCCTCGCAGCATGAAATCCCTTATCCTTATGTCATCGATGGCTCTGAATTGACACTTGATCGCTCAATGAGCGCTGGGTTAACTCGCTACTTCCCGACAACAGAACTGGCGCAAATTGGCGATGAAACTGCAGACGGCATTTATCATCCAACTGAATTCTCCCCGCTATCGCATTTTGATGCGCGCCGCGTCGATTTTTCCCTCGCACGGTTGCGCCATTATACCGGTACGCCAGTTGAACATTTTCAGCCGTTCGTCTTGTTTACCAACTACACACGTTATGTGGATGAATTCGTTCGTTGGGGATGCAGCCAGATCCTCGATCCTGATAGTCCCTACATTGCCCTTTCTTGTGCTGGCGGGAACTGGATCACCGCCGAAACCGAAGCGCCAGAAGAAGCCATTTCCGACCTTGCATGGAAAAAACATCAGATGCCAGCATGGCATTTAATTACCGCCGATGGTCAGGGTATTACTCTGGTGAATATTGGCGTGGGACCGTCAAATGCTAAAACCATCTGCGATCATCTGGCAGTGCTACGCCCGGATGTCTGGTTGATGATTGGTCACTGTGGCGGATTACGTGAAAGTCAGGCCATTGGCGATTATGTACTTGCACACGCTTATTTACGCGATGACCACGTTCTTGATGCGGTTCTGCCGCCCGATATTCCTATTCCGAGCATTGCTGAAGTGCAACGTGCGCTTTATGACGCCACCAAGCTGGTGAGCGGCAGGCCCGGTGAGGAAGTCAAACAGCGGCTACGTACTGGTACTGTGGTAACCACAGATGACAGGAACTGGGAATTACGTTACTCAGCTTCTGCACTTCGTTTTAACTTAAGCCGGGCCGTAGCAATTGATATGGAAAGTGCAACCATTGCCGCGCAAGGATATCGTTTCCGCGTGCCATACGGGACACTACTGTGTGTTTCAGATAAACCGTTGCATGGCGAGATTAAACTTCCCGGCCAGGCTAACCGTTTTTATGAAGGCGCTATTTCCGAACATCTGCAAATTGGCATTCGGGCGATCGATTTGCTGCGCGCAGAAGGCGACCGACTGCATTCGCGTAAATTACGAACCTTTAATGAGCCGCCGTTCCGATAA", + "dna_sequence_length": 1455, + "functions": [ + "AMP nucleosidase" + ], + "id": "CDS_1964", + "location": [ + [ + "NC_000913", + 2055061, + "+", + 1455 + ] + ], + "md5": "4dc4d05b73d4896ae818594255665805", + "parent_gene": "", + "protein_md5": "a4a016f7af3c77b2fbb0869da4729061", + "protein_translation": "MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHEIPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR", + "protein_translation_length": 484, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006582" + ], + [ + "gene_synonym", + "ECK1978" + ], + [ + "gene_synonym", + "EcoGene:EG13382" + ], + [ + "gene_synonym", + "GI:16129927" + ], + [ + "gene_synonym", + "GeneID:946493" + ], + [ + "gene_synonym", + "JW1964" + ], + [ + "gene_synonym", + "NP_416490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A2" + ], + [ + "gene_synonym", + "b1983" + ], + [ + "gene_synonym", + "yeeN" + ] + ], + "dna_sequence": "GTGGGACGTAAATGGGCCAATATTGTTGCTAAAAAAACGGCTAAAGACGGTGCAACGTCTAAAATTTATGCAAAATTCGGTGTAGAAATCTATGCTGCTGCTAAACAAGGTGAACCCGATCCAGAATTAAACACATCTTTAAAATTCGTTATTGAACGTGCAAAGCAGGCACAAGTTCCAAAGCACGTTATTGATAAAGCAATTGATAAAGCCAAAGGCGGCGGAGATGAAACGTTCGTGCAGGGACGTTATGAAGGCTTTGGTCCTAATGGCTCAATGATTATCGCCGAGACATTGACTTCAAATGTTAACCGTACGATTGCTAACGTTCGCACAATTTTCAATAAAAAAGGCGGCAATATCGGAGCGGCAGGTTCTGTCAGCTATATGTTTGACAATACGGGTGTGATTGTATTTAAAGGGACAGACCCTGACCATATTTTTGAAATTTTACTTGAAGCTGAAGTTGATGTTCGTGATGTGACTGAAGAAGAAGGTAACATTGTTATTTATACTGAACCTACTGACCTTCATAAAGGAATCGCGGCTCTAAAAGCAGCTGGAATCACTGAGTTCTCAACAACAGAATTAGAAATGATTGCTCAATCTGAAGTTGAGCTTTCCCCAGAAGATTTAGAAATCTTTGAAGGGCTTGTTGATGCCCTTGAAGATGACGACGATGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAA", + "dna_sequence_length": 717, + "functions": [ + "UPF0082 family protein" + ], + "id": "CDS_1965", + "location": [ + [ + "NC_000913", + 2056858, + "+", + 717 + ] + ], + "md5": "8573833410cfa7648fb5fffda7d7d9ca", + "parent_gene": "", + "protein_md5": "91f3bc2cc5f1320647f1e1fb1479af44", + "protein_translation": "MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006586" + ], + [ + "gene_synonym", + "ECK1980" + ], + [ + "gene_synonym", + "EcoGene:EG13383" + ], + [ + "gene_synonym", + "GI:226524727" + ], + [ + "gene_synonym", + "GeneID:946506" + ], + [ + "gene_synonym", + "JW1965" + ], + [ + "gene_synonym", + "NP_416491.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76352" + ], + [ + "gene_synonym", + "b1985" + ], + [ + "gene_synonym", + "yeeO" + ] + ], + "dna_sequence": "ATGTGGTTTCACTTTCTGCAATTAAGGTCGGCTTTGAATATCTCCTCTGCTTTACGCCAGGTTGTTCACGGCACTCGCTGGCACGCTAAACGCAAGAGCTACAAAGTGTTGTTCTGGCGCGAGATAACCCCGCTTGCTGTTCCTATCTTCATGGAGAATGCCTGTGTCCTGTTGATGGGGGTTCTGAGCACTTTTCTGGTCAGCTGGCTGGGAAAAGATGCGATGGCCGGCGTGGGATTGGCGGACAGCTTCAATATGGTCATTATGGCTTTTTTTGCTGCTATCGATCTTGGTACTACTGTCGTTGTGGCATTTAGTCTCGGTAAGCGGGATCGACGACGAGCGAGGGTGGCGACGCGGCAGTCATTGGTGATCATGACGTTGTTTGCCGTACTGTTGGCAACGCTTATTCATCATTTTGGCGAACAAATTATTGATTTCGTCGCGGGTGATGCCACGACAGAAGTTAAAGCACTGGCGTTGACTTATCTGGAGCTGACGGTACTCAGTTATCCAGCAGCTGCCATCACTCTTATTGGTAGCGGGGCACTTCGTGGTGCAGGGAATACGAAAATACCGCTATTGATTAACGGTAGCCTGAATATTCTTAATATTATTATTAGCGGCATATTGATTTACGGCCTTTTCTCCTGGCCGGGACTGGGATTTGTCGGGGCAGGGCTGGGTTTAACCATTTCTCGTTATATTGGCGCAGTTGCAATTTTGTGGGTGCTGGCGATTGGTTTTAATCCTGCGCTAAGGATTTCGTTAAAGAGCTATTTTAAACCGCTGAATTTTAGCATTATCTGGGAAGTCATGGGGATTGGTATTCCCGCGAGTGTCGAATCAGTGTTATTTACCAGTGGTCGGTTATTAACCCAAATGTTCGTTGCCGGGATGGGGACCAGTGTTATTGCCGGAAATTTTATCGCGTTTTCAATTGCGGCTCTTATCAACTTACCCGGAAGTGCGCTCGGCTCTGCTTCTACGATCATTACAGGCCGAAGGTTGGGGGTAGGGCAGATAGCGCAAGCAGAGATTCAGTTGCGGCATGTGTTCTGGCTTTCCACTCTTGGATTAACGGCCATCGCCTGGCTAACGGCTCCCTTTGCCGGGGTTATGGCATCGTTTTACACCCAGGATCCACAGGTTAAACATGTCGTTGTGATTCTGATTTGGCTAAATGCTTTATTTATGCCTATTTGGTCCGCCTCATGGGTGCTACCCGCTGGATTTAAAGGTGCTCGTGATGCCCGTTACGCCATGTGGGTTTCGATGTTGAGCATGTGGGGTTGTCGGGTTGTAGTCGGTTATGTGCTGGGAATCATGCTTGGCTGGGGTGTGGTTGGTGTCTGGATGGGAATGTTTGCCGACTGGGCTGTGCGGGCCGTGCTGTTTTACTGGCGAATGGTTACTGGACGTTGGCTATGGAAATACCCTCGACCCGAGCCGCAAAAGTGTGAAAAAAAGCCAGTTGTGTCGGAATAA", + "dna_sequence_length": 1488, + "functions": [ + "putative multdrug exporter, MATE family" + ], + "id": "CDS_1966", + "location": [ + [ + "NC_000913", + 2059690, + "-", + 1488 + ] + ], + "md5": "76d33c23f7a42845b091e3b877da9400", + "parent_gene": "", + "protein_md5": "c5a87cb03ccb03b68669484d14269604", + "protein_translation": "MWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMFADWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKPVVSE", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006590" + ], + [ + "gene_synonym", + "ECK1982" + ], + [ + "gene_synonym", + "EcoGene:EG14264" + ], + [ + "gene_synonym", + "GI:16129929" + ], + [ + "gene_synonym", + "GeneID:946502" + ], + [ + "gene_synonym", + "JW1966" + ], + [ + "gene_synonym", + "NP_416492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47083" + ], + [ + "gene_synonym", + "b1987" + ], + [ + "gene_synonym", + "cbl" + ] + ], + "dna_sequence": "GTGAATTTCCAACAACTAAAGATAATCCGCGAGGCTGCACGTCAGGATTACAACCTGACAGAGGTTGCGAATATGCTTTTTACCTCACAGTCAGGCGTCAGCCGTCATATTCGGGAACTGGAGGATGAACTTGGCATCGAAATATTTGTTCGACGAGGTAAGCGACTGCTGGGCATGACTGAACCGGGCAAAGCATTACTGGTCATTGCAGAACGTATTCTGAATGAAGCCAGTAATGTTCGTCGGCTTGCAGACCTGTTTACCAACGATACGTCTGGCGTTCTCACTATTGCAACGACGCATACTCAGGCACGTTATAGCTTGCCAGAGGTCATTAAAGCTTTTCGCGAACTTTTCCCGGAGGTTCGGCTCGAGCTAATCCAGGGGACGCCACAGGAAATTGCGACATTGTTGCAAAATGGCGAAGCTGATATTGGTATCGCCAGCGAGCGTTTGAGTAATGACCCGCAGCTCGTCGCCTTCCCGTGGTTTCGTTGGCACCATAGTTTGCTTGTTCCACACGATCATCCCTTGACGCAAATTTCACCATTGACGCTGGAATCAATAGCGAAGTGGCCGTTAATCACTTACCGACAGGGGATTACGGGGCGCTCACGTATTGATGACGCATTTGCCCGCAAAGGTTTGCTGGCAGATATTGTATTAAGTGCGCAGGATTCTGATGTCATTAAAACCTATGTTGCTCTTGGGCTTGGGATCGGATTAGTTGCCGAGCAATCCAGTGGCGAACAAGAGGAAGAGAATTTAATCCGCCTGGATACGCGGCATCTTTTTGATGCTAATACTGTCTGGTTGGGACTGAAGCGAGGACAACTTCAGCGTAACTATGTCTGGCGCTTTCTGGAACTTTGTAATGCAGGACTGTCAGTTGAGGATATCAAGCGGCAGGTGATGGAAAGCAGTGAAGAGGAAATTGATTATCAGATATAG", + "dna_sequence_length": 951, + "functions": [ + "ssuEADCB/tauABCD operon transcriptional activator" + ], + "id": "CDS_1967", + "location": [ + [ + "NC_000913", + 2060914, + "-", + 951 + ] + ], + "md5": "514e92ee44e837f0e210875566e3ef66", + "parent_gene": "", + "protein_md5": "fef30d4c9e0272bdb7e00d090bbb769b", + "protein_translation": "MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKRQVMESSEEEIDYQI", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006594" + ], + [ + "gene_synonym", + "ECK1983" + ], + [ + "gene_synonym", + "EcoGene:EG14265" + ], + [ + "gene_synonym", + "GI:16129930" + ], + [ + "gene_synonym", + "GeneID:946501" + ], + [ + "gene_synonym", + "JW1967" + ], + [ + "gene_synonym", + "NP_416493.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47005" + ], + [ + "gene_synonym", + "b1988" + ], + [ + "gene_synonym", + "nac" + ] + ], + "dna_sequence": "ATGAACTTCAGACGCCTGAAATACTTCGTAAAAATTGTAGATATTGGTAGCCTGACCCAGGCTGCTGAAGTATTGCATATCGCACAACCAGCGCTCAGCCAGCAGGTTGCCACACTGGAAGGTGAGTTAAATCAACAACTTTTGATCCGTACAAAGCGGGGCGTTACACCAACAGACGCCGGAAAAATTCTCTATACCCATGCGCGGGCCATTTTACGTCAGTGTGAACAGGCCCAACTGGCGGTGCATAACGTTGGTCAGGCATTATCGGGGCAAGTCTCGATTGGCTTTGCACCAGGAACCGCTGCGTCATCCATCACCATGCCCTTATTACAGGCGGTTCGCGCTGAATTTCCGGAGATCGTTATCTATCTTCATGAAAATAGTGGTGCAGTGCTTAACGAAAAATTGATAAATCACCAACTCGATATGGCGGTGATTTATGAGCATTCCCCTGTGGCTGGTGTATCCAGTCAGGCTTTGCTGAAAGAAGATCTTTTTCTGGTAGGAACTCAAGATTGCCCGGGGCAAAGCGTTGATGTGAATGCTATTGCGCAAATGAACCTCTTTCTCCCCAGTGATTACAGTGCTATTAGACTTCGTGTTGATGAGGCTTTTTCCCTACGGCGACTCACGGCAAAAGTTATTGGTGAAATTGAGTCTATTGCCACGCTTACCGCAGCGATTGCCAGCGGCATGGGCGTTGCAGTATTACCCGAATCGGCCGCGCGTTCGTTATGTGGCGCAGTAAATGGGTGGATGTCACGCATTACCACTCCTTCCATGAGTCTCTCTTTGTCATTAAATTTACCCGCCAGAGCGAACTTATCGCCACAGGCACAGGCAGTGAAAGAGTTGTTAATGTCAGTGATTAGTTCTCCAGTGATGGAAAAAAGGCAGTGGCAATTGGTGAGCTAA", + "dna_sequence_length": 918, + "functions": [ + "nitrogen assimilation regulon transcriptional regulator", + "autorepressor" + ], + "id": "CDS_1968", + "location": [ + [ + "NC_000913", + 2061933, + "-", + 918 + ] + ], + "md5": "c830730a0ecb945edbb2a1166a9a7b5a", + "parent_gene": "", + "protein_md5": "42afa4a741ddc33f47f045646e6cbbb2", + "protein_translation": "MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQWQLVS", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006607" + ], + [ + "gene_synonym", + "ECK1985" + ], + [ + "gene_synonym", + "EcoGene:EG12682" + ], + [ + "gene_synonym", + "GI:16129931" + ], + [ + "gene_synonym", + "GeneID:945273" + ], + [ + "gene_synonym", + "JW1968" + ], + [ + "gene_synonym", + "NP_416494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39176" + ], + [ + "gene_synonym", + "b1990" + ], + [ + "gene_synonym", + "erfK" + ], + [ + "gene_synonym", + "ldtA" + ], + [ + "gene_synonym", + "srfK" + ], + [ + "gene_synonym", + "yeeG" + ], + [ + "gene_synonym", + "yzzT" + ] + ], + "dna_sequence": "ATGCGTCGTGTAAATATTCTTTGCTCATTTGCTCTGCTTTTTGCCAGCCATACTAGCCTGGCGGTAACTTATCCATTACCTCCAGAGGGTAGCCGTTTAGTGGGGCAGTCGTTTACTGTAACTGTTCCTGATCACAATACCCAGCCGCTGGAGACTTTTGCCGCACAATACGGGCAAGGGTTAAGTAACATGCTGGAAGCGAACCCGGGCGCTGATGTTTTTTTGCCGAAGTCTGGCTCGCAACTCACCATTCCGCAGCAACTGATTTTGCCCGACACTGTTCGTAAAGGGATTGTTGTTAACGTCGCTGAGATGCGTCTTTATTACTACCCACCAGACAGTAATACTGTGGAAGTCTTTCCTATTGGTATCGGCCAGGCTGGGCGAGAAACCCCGCGTAACTGGGTGACTACCGTTGAACGTAAACAAGAAGCTCCAACCTGGACGCCAACGCCGAACACTCGGCGCGAATATGCGAAACGAGGGGAGAGTTTGCCCGCATTTGTTCCTGCGGGCCCCGATAATCCCATGGGGCTGTACGCGATTTATATTGGCAGGTTGTATGCCATCCATGGTACCAATGCCAATTTTGGTATTGGGCTCCGGGTAAGTCAGGGCTGTATTCGTCTGCGCAATGACGATATCAAATATCTGTTTGATAATGTTCCTGTTGGGACGCGTGTGCAAATTATCGACCAGCCAGTAAAATACACCACTGAACCAGATGGCTCGAACTGGCTGGAAGTTCATGAGCCATTGTCGCGCAATCGTGCAGAATATGAGTCTGACCGAAAAGTGCCATTGCCGGTAACCCCATCTTTGCGGGCGTTTATCAACGGGCAAGAAGTTGATGTAAATCGCGCAAATGCTGCGTTGCAACGTCGATCGGGAATGCCTGTGCAAATTAGTTCTGGTTCAAGACAGATGTTTTAA", + "dna_sequence_length": 933, + "functions": [ + "L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1969", + "location": [ + [ + "NC_000913", + 2063323, + "-", + 933 + ] + ], + "md5": "e4332eda8ff8419705dd7cdfa0dbdcb4", + "parent_gene": "", + "protein_md5": "58dfc7bde3dbaccd9264edaa9f55b6d0", + "protein_translation": "MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006611" + ], + [ + "gene_synonym", + "ECK1986" + ], + [ + "gene_synonym", + "EcoGene:EG12151" + ], + [ + "gene_synonym", + "GI:16129932" + ], + [ + "gene_synonym", + "GeneID:946517" + ], + [ + "gene_synonym", + "JW1969" + ], + [ + "gene_synonym", + "NP_416495.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36562" + ], + [ + "gene_synonym", + "b1991" + ], + [ + "gene_synonym", + "cobT" + ] + ], + "dna_sequence": "ATGCAAATACTTGCCGATTTACTGAATACGATCCCAGCCATCGATTCTACCGCTATGTCGCGTGCACAACGGCATATTGACGGGTTACTCAAACCTGTTGGTAGCCTGGGAAAGCTGGAGGTGCTTGCCATACAACTGGCAGGAATGCCGGGGTTGAATGGCATACCGCATGTGGGCAAAAAAGCGGTACTGGTTATGTGTGCCGATCACGGCGTCTGGGAGGAAGGGGTCGCTATTTCTCCAAAAGAAGTGACAGCCATACAGGCTGAAAATATGACCCGTGGAACAACCGGCGTGTGTGTGCTGGCAGAACAAGCGGGCGCTAACGTCCACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGGGCTTATCAACATGCGTGTCGCACGAGGTAGCGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCGTCAGGCTGAAAAGTTGCTTTTGGACGTCATATGTTATACGCAGGAGCTGGCAAAAAACGGTGTCACGCTGTTTGGTGTAGGTGAACTGGGGATGGCAAACACGACACCGGCAGCAGCAATAGTCAGCACAATCACTGGCCGGGATCCTGAAGAAGTGGTTGGGATTGGCGCAAACCTGCCGACAGATAAACTGGCTAATAAAATTGATGTTGTGCGTCGGGCGATTACGTTGAATCAACCAAATCCTCAGGATGGTGTTGATGTCCTGGCAAAAGTGGGTGGATTTGATTTGGTCGGAATAGCTGGAGTGATGTTAGGTGCTGCTTCCTGCGGTTTACCCGTGTTGCTGGATGGATTTCTTTCTTATGCTGCTGCGCTCGCAGCCTGCCAGATGTCTCCTGCGATCAAACCGTATCTCATTCCTTCTCACCTGTCGGCAGAAAAAGGCGCGCGTATAGCGCTCTCGCATTTGGGGCTGGAGCCTTATCTCAATATGGAGATGCGTTTAGGTGAGGGGAGTGGCGCAGCTCTGGCGATGCCCATCATCGAAGCTGCCTGTGCGATATACAACAACATGGGCGAACTTGCTGCCAGTAATATTGTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAA", + "dna_sequence_length": 1080, + "functions": [ + "nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase" + ], + "id": "CDS_1970", + "location": [ + [ + "NC_000913", + 2064467, + "-", + 1080 + ] + ], + "md5": "3d9ba06148bc3d4974c5d89ddfa99afb", + "parent_gene": "", + "protein_md5": "05a1f2176f9be9b428d86ac57140002c", + "protein_translation": "MQILADLLNTIPAIDSTAMSRAQRHIDGLLKPVGSLGKLEVLAIQLAGMPGLNGIPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVLAEQAGANVHVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYTQELAKNGVTLFGVGELGMANTTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVGGFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNS", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006613" + ], + [ + "gene_synonym", + "ECK1987" + ], + [ + "gene_synonym", + "EcoGene:EG12150" + ], + [ + "gene_synonym", + "GI:16129933" + ], + [ + "gene_synonym", + "GeneID:946520" + ], + [ + "gene_synonym", + "JW1970" + ], + [ + "gene_synonym", + "NP_416496.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36561" + ], + [ + "gene_synonym", + "b1992" + ], + [ + "gene_synonym", + "cobS" + ] + ], + "dna_sequence": "ATGAGTAAATTATTTTGGGCGATGCTCTCATTTATTACGCGTCTGCCTGTACCGCGTCGCTGGTCCCAGGGACTGGATTTCGAGCATTATTCTCGCGGTATTATTACTTTTCCTTTGATTGGATTATTGCTTGGCGCGATTAGCGGGCTGGTCTTCATGGTGCTGCAGGCATGGTGTGGCGCACCACTGGCGGCACTGTTTAGCGTACTTGTGCTGGTGCTGATGACCGGGGGATTCCATCTGGACGGCCTCGCTGATACCTGTGATGGCGTATTTTCTGCACGTAGCCGCGATCGCATGTTGGAAATCATGCGTGATAGCCGTTTAGGCACCCACGGCGGTCTGGCATTGATTTTTGTGGTACTGGCAAAGATTCTGGTGTTAAGCGAGTTGGCTCTGCGTGGCGAATCGATCCTTGCATCGCTGGCGGCAGCATGTGCGGTCAGCCGCGGGACTGCCGCATTATTGATGTATCGTCATCGTTATGCGCGGGAAGAAGGGCTTGGCAATGTGTTCATTGGCAAAATTGATGGGCGACAAACCTGCGTCACACTCGGCTTAGCCGCTATTTTTGCTGCCGTATTATTGCCGGGTATGCATGGTGTGGCTGCTATGGTGGTGACGATGGTGGCGATTTTCATCCTCGGTCAGCTTCTCAAACGTACGCTGGGCGGGCAAACGGGCGATACGCTGGGAGCAGCCATAGAGCTTGGTGAACTGGTCTTCCTGCTGGCACTGCTATAA", + "dna_sequence_length": 744, + "functions": [ + "cobalamin synthase" + ], + "id": "CDS_1971", + "location": [ + [ + "NC_000913", + 2065222, + "-", + 744 + ] + ], + "md5": "2548545cfaf4a000ed5f98b3d956b62d", + "parent_gene": "", + "protein_md5": "907ef3d36cec2b858bb4d54e5b86bc80", + "protein_translation": "MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCGAPLAALFSVLVLVLMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFVVLAKILVLSELALRGESILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGELVFLLALL", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006616" + ], + [ + "gene_synonym", + "ECK1988" + ], + [ + "gene_synonym", + "EcoGene:EG13238" + ], + [ + "gene_synonym", + "GI:16129934" + ], + [ + "gene_synonym", + "GeneID:946519" + ], + [ + "gene_synonym", + "JW1971" + ], + [ + "gene_synonym", + "NP_416497.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE76" + ], + [ + "gene_synonym", + "b1993" + ], + [ + "gene_synonym", + "cobU" + ] + ], + "dna_sequence": "ATGATGATTTTGGTGACGGGGGGCGCACGGAGCGGGAAGAGTCGCCACGCAGAGGCGCTTATTGGGGACTCTTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCATCGGCAAGGCCGCCCGGAGCACTGGCGCACAGTGGAGCGCTGGCAACATCTTGATGAATTAATTCATGCAGACATTAACCCGAATGAGGTTGTGTTGCTTGAATGCGTTACCACAATGGTGACTAATCTGTTGTTTGATTATGGCGGCGATAAAGACCCTGATGAATGGGATTATCAGGCGATGGAACAGGCGATTAATGCTGAGATTCAGTCGTTGATTGCTGCCTGCCAACGTTGCCCCGCAAAGGTTGTATTAGTGACTAACGAAGTGGGAATGGGGATTGTGCCGGAGAGTCGTCTGGCACGACATTTTCGTGATATTGCCGGGCGGGTAAATCAGCAGTTGGCCGCTGCGGCAAATGAAGTATGGCTGGTGGTTTCGGGTATTGGAGTAAAAATCAAATGA", + "dna_sequence_length": 546, + "functions": [ + "cobinamide kinase and cobinamide phosphate guanylyltransferase" + ], + "id": "CDS_1972", + "location": [ + [ + "NC_000913", + 2065764, + "-", + 546 + ] + ], + "md5": "e8146f4a058501dec7b583aa8c040a22", + "parent_gene": "", + "protein_md5": "5d88ea27e95c24e146db18b083197392", + "protein_translation": "MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4437" + ], + [ + "gene_synonym", + "EcoGene:EG13239" + ], + [ + "gene_synonym", + "GeneID:5625565" + ], + [ + "gene_synonym", + "b4639" + ], + [ + "gene_synonym", + "yeeH" + ] + ], + "dna_sequence": "TGCATAGTCGCCACCATTCCGGATAATTCTATTACGTTGTTTTACAAGTTCTTTTACAGCGCAGATCTGTCGCTGACGTTGAATCAA", + "dna_sequence_length": 87, + "id": "CDS_1973", + "location": [ + [ + "NC_000913", + 2066154, + "-", + 87 + ] + ], + "md5": "8d768d364009d727eb298f13fbb83cd9", + "parent_gene": "", + "protein_md5": "bd8388b092af39e964dce4b2f9925908", + "protein_translation": "CIVATIPDNSITLFYKFFYSADLSLTLNQ", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006619" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16129935" + ], + [ + "gene_synonym", + "GeneID:946507" + ], + [ + "gene_synonym", + "NP_416498.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE53" + ], + [ + "gene_synonym", + "b1994" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGCGGCCTGACCCACAGCCTAGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAAGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_1974", + "location": [ + [ + "NC_000913", + 2067321, + "-", + 1017 + ] + ], + "md5": "8dabd467c15369dc938b2656dd3ac970", + "parent_gene": "", + "protein_md5": "b4f3221cda4397f590120eea845f4e5e", + "protein_translation": "MFVIWSHGTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4451" + ], + [ + "gene_synonym", + "EcoGene:EG14440" + ], + [ + "gene_synonym", + "GeneID:5625566" + ], + [ + "gene_synonym", + "b4640" + ], + [ + "gene_synonym", + "yoeG" + ] + ], + "dna_sequence": "ATGGTTATTTAACTTCTCAGCACCACTAATGATCCTGAGCAACTTCGTATTTGGGCCATTACCATGGAGTAGAAAGCTGTGTCTGAGAATGCAGAATTTGAGAAAAGAATTCGCTTTCTTGGAGAGCTTCTGAAAATGGCACGCTAACAACGTTTTGTTAAAAAATGTGAATCACTTGCCGGGGCTGCATTTTCTATTCGAGGAGAATGTTGACGTAGATATTACAGAAATCTCAGCGCATCAGGATAAACTGCTACCTTAGGTCAACCACCAAAAGAAAATACAATACGTCCAGTTTGTATGCCTTTAATAACACATCTTCTAAATGTTGAAGAATTATCCCGCCTGCTGAAGAACGTTGCTCTGAGTGTGATAAACCTTTTTATTCTTGATGATGTCAGCGAGAAGATGGAATATATCCCCGACTGGGTCGTGGGTTACCCGGTTAAACATCTGGTGGCGCTAATAAATCTGGCAAGTCACATTCTGTTGAATGCTGTGACAGTGCCTTACCGAGAGAGCGAAATTGTGGTG", + "dna_sequence_length": 534, + "id": "CDS_1975", + "location": [ + [ + "NC_000913", + 2067892, + "-", + 435 + ], + [ + "NC_000913", + 2067458, + "-", + 99 + ] + ], + "md5": "f32a5f62436e2cdf555effcede289738", + "parent_gene": "", + "protein_md5": "2b0474c946f07c041730926b3f88f9b8", + "protein_translation": "MVI", + "protein_translation_length": 3, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4452" + ], + [ + "gene_synonym", + "EcoGene:EG14441" + ], + [ + "gene_synonym", + "GeneID:5625567" + ], + [ + "gene_synonym", + "b4641" + ], + [ + "gene_synonym", + "yoeH" + ] + ], + "dna_sequence": "GCACTCTTGACATAAGAGTGCGGTCCGTGGAAAACGGAGTTGAAAAAATGGTGTCTGAAAGAAGGTACCATCATTGTGATGACAAATACTTTGGCGTGGATAATGTAATTAATTGCTGAAATTGACCGTATATGCGGTAAGACTCATATCAGTATCAGG", + "dna_sequence_length": 159, + "id": "CDS_1976", + "location": [ + [ + "NC_000913", + 2068419, + "-", + 159 + ] + ], + "md5": "6f4f3ea24a5ffeecf410c662ff01955a", + "parent_gene": "", + "protein_md5": "4c616cdff6f8a8e58b6aa3e4c2f14eff", + "protein_translation": "ALLT", + "protein_translation_length": 4, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006626" + ], + [ + "gene_synonym", + "ASAP:ABE-0006636" + ], + [ + "gene_synonym", + "ASAP:ABE-0285114" + ], + [ + "gene_synonym", + "ECK1989" + ], + [ + "gene_synonym", + "EcoGene:EG14308" + ], + [ + "gene_synonym", + "GeneID:4056042" + ], + [ + "gene_synonym", + "JW5326" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76356" + ], + [ + "gene_synonym", + "b4582" + ], + [ + "gene_synonym", + "yoeA" + ], + [ + "gene_synonym", + "yoeE" + ] + ], + "dna_sequence": "ATGTTATATAATATACCTTGTCGAATTTATATCCTTTCCACTCTGTCATTATGCATTTCTGGGATAGTTTCTACTGCAACCGCAACTTCTTCAGAAACAAAAATCAGCAACGAAGAGACGCTCGTCGTGACCACGAATCGTTCGGCAAGCAACCTTTGGGAAAGCCCGGCGACTATACAGGTTATTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAACAAATCCGCATTCGTGGCGAAGCATCCTCCCGTGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATGAGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTGTACGGTTCACAGGCAATTGGCGGTATTGTTAACTTCATCACCAAAAAGGGTGAA", + "dna_sequence_length": 504, + "id": "CDS_1977", + "location": [ + [ + "NC_000913", + 2068635, + "+", + 306 + ], + [ + "NC_000913", + 2070277, + "+", + 198 + ] + ], + "md5": "e05e5a58e3288589824a0f888da3ed9c", + "parent_gene": "", + "protein_md5": "97cbdfc2e1e8267dbb07854127de628a", + "protein_translation": "MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKGE", + "protein_translation_length": 168, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006629" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16129937" + ], + [ + "gene_synonym", + "GeneID:946403" + ], + [ + "gene_synonym", + "NP_416500.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF55" + ], + [ + "gene_synonym", + "b1996" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_1978", + "location": [ + [ + "NC_000913", + 2069857, + "-", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006631" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698282" + ], + [ + "gene_synonym", + "GeneID:946455" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF42" + ], + [ + "gene_synonym", + "YP_026163.2" + ], + [ + "gene_synonym", + "b1997" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_1979", + "location": [ + [ + "NC_000913", + 2070180, + "-", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006639" + ], + [ + "gene_synonym", + "ECK1991" + ], + [ + "gene_synonym", + "EcoGene:EG13384" + ], + [ + "gene_synonym", + "GeneID:946524" + ], + [ + "gene_synonym", + "JW5327" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76359" + ], + [ + "gene_synonym", + "b1999" + ], + [ + "gene_synonym", + "yeeP" + ] + ], + "dna_sequence": "TACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCAGTGCGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGTATTCAGCCTTCTCCTGCACAGGCACAGAATATTCGCGAAAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGA", + "dna_sequence_length": 552, + "id": "CDS_1980", + "location": [ + [ + "NC_000913", + 2070660, + "+", + 552 + ] + ], + "md5": "721307c7febafbfcec59cd025a3967a1", + "parent_gene": "", + "protein_md5": "09aa1656f79f1ec645c9db49b68941a6", + "protein_translation": "YRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006642" + ], + [ + "gene_synonym", + "ECK1993" + ], + [ + "gene_synonym", + "EcoGene:EG12686" + ], + [ + "gene_synonym", + "GI:49176177" + ], + [ + "gene_synonym", + "GeneID:946540" + ], + [ + "gene_synonym", + "JW1982" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39180" + ], + [ + "gene_synonym", + "YP_026164.1" + ], + [ + "gene_synonym", + "agn" + ], + [ + "gene_synonym", + "agn43" + ], + [ + "gene_synonym", + "b2000" + ], + [ + "gene_synonym", + "flu" + ], + [ + "gene_synonym", + "yeeQ" + ], + [ + "gene_synonym", + "yzzX" + ] + ], + "dna_sequence": "ATGAAACGACATCTGAATACCTGCTACAGGCTGGTATGGAATCACATGACGGGCGCTTTCGTGGTTGCCTCCGAACTGGCCCGCGCACGGGGTAAACGTGGCGGTGTGGCGGTTGCACTGTCTCTTGCCGCAGTCACGTCACTCCCGGTGCTGGCTGCTGACATCGTTGTGCACCCGGGAGAAACCGTGAACGGCGGAACACTGGCAAATCATGACAACCAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGATAACGAGGCCAATACCGGCGGGCAATGGGTACAGGATGGCGGAACAGCCAACAAAACGACTGTCACCAGTGGTGGTCTTCAGAGAGTGAACCCCGGTGGAAGTGTCTCAGACACGGTTATCAGTGCCGGAGGCGGACAGAGCCTTCAGGGACGGGCTGTGAACACCACGCTGAATGGTGGCGAACAGTGGATGCATGAGGGGGCGATAGCCACAGGAACCGTCATTAATGATAAGGGCTGGCAGGTCGTCAAGCCCGGTACAGTGGCAACGGATACCGTTGTTAATACCGGGGCGGAAGGGGGACCGGATGCAGAAAACGGTGATACCGGGCAGTTTGTTCGCGGGGATGCCGTACGCACAACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGTTTATGCCGGCGGCGACCAGACTGTACATGGTCACGCACTGGATACCACGCTGAATGGGGGATACCAGTATGTGCACAACGGCGGTACAGCGTCTGACACTGTTGTGAACAGTGACGGCTGGCAGATTGTCAAAAACGGGGGTGTGGCCGGGAATACCACCGTTAATCAGAAGGGCAGACTGCAGGTGGACGCCGGTGGTACAGCCACGAATGTCACCCTGAAGCAGGGCGGCGCACTGGTTACCAGTACGGCTGCAACCGTTACCGGCATAAACCGCCTGGGAGCATTCTCTGTTGTGGAGGGTAAAGCTGATAATGTCGTACTGGAAAATGGCGGACGCCTGGATGTGCTGACCGGACACACAGCCACTAATACCCGCGTGGATGATGGCGGAACGCTGGATGTCCGCAACGGTGGCACCGCCACCACCGTATCCATGGGAAATGGCGGTGTACTGCTGGCCGATTCCGGTGCCGCTGTCAGTGGTACCCGGAGCGACGGAAAGGCATTCAGTATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACGGATACCACGGTAAATGGCGGACTGTTCACCGCCAGGGGCGGCACACTGGCGGGCACCACCACGCTGAATAACGGCGCCATACTTACCCTTTCCGGGAAGACGGTGAACAACGATACCCTGACCATCCGTGAAGGCGATGCACTCCTGCAGGGAGGCTCTCTCACCGGTAACGGCAGCGTGGAAAAATCAGGAAGTGGCACACTCACTGTCAGCAACACCACACTCACCCAGAAAGCCGTCAACCTGAATGAAGGCACGCTGACGCTGAACGACAGTACCGTCACCACGGATGTCATTGCTCAGCGCGGTACAGCCCTGAAGCTGACCGGCAGCACTGTGCTGAACGGTGCCATTGACCCCACGAATGTCACTCTCGCCTCCGGTGCCACCTGGAATATCCCCGATAACGCCACGGTGCAGTCGGTGGTGGATGACCTCAGCCATGCCGGACAGATTCATTTCACCTCCACCCGCACAGGGAAGTTCGTACCGGCAACCCTGAAAGTGAAAAACCTGAACGGACAGAATGGCACCATCAGCCTGCGTGTACGCCCGGATATGGCACAGAACAATGCTGACAGACTGGTCATTGACGGCGGCAGGGCAACCGGAAAAACCATCCTGAACCTGGTGAACGCCGGCAACAGTGCGTCGGGGCTGGCGACCAGCGGTAAGGGTATTCAGGTGGTGGAAGCCATTAACGGTGCCACCACGGAGGAAGGGGCCTTTGTCCAGGGGAACAGGCTGCAGGCCGGTGCCTTTAACTACTCCCTCAACCGGGACAGTGATGAGAGCTGGTATCTGCGCAGTGAAAATGCTTATCGTGCAGAAGTCCCCCTGTATGCCTCCATGCTGACACAGGCAATGGACTATGACCGGATTGTGGCAGGCTCCCGCAGCCATCAGACCGGTGTAAATGGTGAAAACAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAATGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGACCTGATGAGAACAGAGGTTGCCGGTATGTCTGTGACCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCTGGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTATACCTGGCAGGGACTTTCCCTGGATGACGGTAAGGACAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGAGATATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACATCACTGGACCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGA", + "dna_sequence_length": 3120, + "functions": [ + "CP4-44 prophage", + "antigen 43 (Ag43) phase-variable biofilm formation autotransporter" + ], + "id": "CDS_1981", + "location": [ + [ + "NC_000913", + 2071539, + "+", + 3120 + ] + ], + "md5": "e4e764859a7d75a7c2538866d85d6c01", + "parent_gene": "", + "protein_md5": "e0cfd0ed8abf576e3766987fded19ccb", + "protein_translation": "MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGLQRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPGTVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF", + "protein_translation_length": 1039, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006648" + ], + [ + "gene_synonym", + "ECK1994" + ], + [ + "gene_synonym", + "EcoGene:EG13385" + ], + [ + "gene_synonym", + "GI:90111368" + ], + [ + "gene_synonym", + "GeneID:946512" + ], + [ + "gene_synonym", + "JW1983" + ], + [ + "gene_synonym", + "NP_416505.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76361" + ], + [ + "gene_synonym", + "b2001" + ], + [ + "gene_synonym", + "yeeR" + ] + ], + "dna_sequence": "ATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCAGGCGTATTTCTGACGATTGCCGGAATGATCATCAGCTTCATGTGGGGACTTGATGGTAAACATATCGCGCTGGAGGCTCACACCTTTGACTCTGTGAAATTTATTCTGACCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTGCAGATCAAAAACATTCAGCAGAACGGGATCACACCAGAAGATATCAGCAAGGAAATTAACGGGTATTACTGCTGTTTTTATACTGCCTTTTTCCTTATGGCGTGTTCTGCATGCGCACCATTGATCGCGTTACAGTACGATATTTCACCGTCACTGATGTGGTGGGGCGGGTTGTTGTACTGGCTGGCTGCATTAGTGACGCTGCTATGGGCGGCCAGCCAGATCCAGGCGCTGAAAAAACTGACCTGTGCCATCAGCCAGACACTGGAAGAACAACCGGTGCTCAACAGTAAATCGTGGCTGACCAGTTTGCAAAACGATTACAGCCTTCCTGACTCACTGACGGAGCGCATCTGGCTGACGCTCATTTCTCAACGGATTTCCCGGGGAGAGCTGAGGGAATTTGAACTGGCAGACGGAAACTGGTTACTGAACAATGCCTGGTATGAAAGAAACATGGCAGGGTTTAACGAACAGTTGAAAGAGAACCTGTCATTCACACCTGATGAACTGAAAACGCTCTTCCGGAACCGCCTGAATTTATCACCGGAAGCGAATGACGATTTTCTCGATCGTTGCCTGGACGGCGGTGACTGGTATCCCTTTTCAGAAGGTCGCCGTTTTGTATCATTCCATCACGTGGATGAGCTTCGTATCTGTGCCTCCTGCGGGCTGACAGAAGTACATCATGCCCCGGAAAATCATAAGCCGGATCCGGAATGGTACTGCTCCTCTCTTTGTCGCGAAACAGAAACACTGTGTCAGGAAATTTATGAACGCCCTTACAACAGCTTTATTTCCGATGCAACGGCGAATGGTCTGATTCTCATGAAACTGCCGGAAACCTGGAGTACAAATGAGAAAATGTTTGCTTCCGGAGGGCAGGGACATGGGTTTGCCGCTGAACGGGGAAACCATATTGTCGACAGAGTCCGTCTGAAAAACGCACGGATCCTCGGTGATAATAATGCCAGAAATGGAGCAGACAGACTGGTCAGCGGAACAGAAATCCAGACGAAATATTGTTCAACTGCAGCCCGTAGCGTCGGTGCGGCATTCGACGGACAAAACGGACAGTATCGTTACATGGGAAATAATGGCCCCATGCAACTGGAAGTCCCCCGTGATCAGTATGCCGGCGCTGTTGAAACCATGAGGAATAAGATCCGCGAAGGTAAAGTAGAGGAGAGATGA", + "dna_sequence_length": 1533, + "functions": [ + "CP4-44 prophage", + "putative membrane protein" + ], + "id": "CDS_1982", + "location": [ + [ + "NC_000913", + 2074779, + "+", + 1533 + ] + ], + "md5": "c30ebc628f9559e981849c7712b69202", + "parent_gene": "", + "protein_md5": "bfacc59dec922abf306b33e12866dd25", + "protein_translation": "MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHIRWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQNGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVTLLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRISRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEANDDFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLCRETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHIVDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNGPMQLEVPRDQYAGAVETMRNKIREGKVEER", + "protein_translation_length": 510, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006650" + ], + [ + "gene_synonym", + "ECK1995" + ], + [ + "gene_synonym", + "EcoGene:EG13386" + ], + [ + "gene_synonym", + "GI:16129943" + ], + [ + "gene_synonym", + "GeneID:946514" + ], + [ + "gene_synonym", + "JW1984" + ], + [ + "gene_synonym", + "NP_416506.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76362" + ], + [ + "gene_synonym", + "b2002" + ], + [ + "gene_synonym", + "yeeS" + ] + ], + "dna_sequence": "ATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACCATCAACCGCACGGAAGTCCATCCCCGGGAAGTGATTAAACGCGCCCTGTACCACAATGCCGCTGCCGTGGTACTGGCACACAATCACCCGTCCGGTGAAGTCACACCCAGTAAGGCAGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGGTGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA", + "dna_sequence_length": 447, + "functions": [ + "CP4-44 prophage", + "putative DNA repair protein" + ], + "id": "CDS_1983", + "location": [ + [ + "NC_000913", + 2076308, + "+", + 447 + ] + ], + "md5": "18a5de9fdd4349f66f2a8a8ef099423c", + "parent_gene": "", + "protein_md5": "b0f5767d4c4d520aabe057e6e586c3d9", + "protein_translation": "MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006653" + ], + [ + "gene_synonym", + "ECK1996" + ], + [ + "gene_synonym", + "EcoGene:EG13387" + ], + [ + "gene_synonym", + "GI:16129944" + ], + [ + "gene_synonym", + "GeneID:946513" + ], + [ + "gene_synonym", + "JW1985" + ], + [ + "gene_synonym", + "NP_416507.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64521" + ], + [ + "gene_synonym", + "b2003" + ], + [ + "gene_synonym", + "yeeT" + ] + ], + "dna_sequence": "ATGAAAATTATCACCCGTGGTGAAGCCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCGGTCGTGAAGTGCAGGATATTCCCGGTGTGCTGGCCGTGTTTGCTGAACGCCGTAAGGACAGTTTTGGTCCGTATGTCCGGCTGATGAGCGTCACCCTGAACTGA", + "dna_sequence_length": 222, + "functions": [ + "CP4-44 prophage", + "uncharacterized protein" + ], + "id": "CDS_1984", + "location": [ + [ + "NC_000913", + 2076817, + "+", + 222 + ] + ], + "md5": "8f5c454c41bb5dacba5aa513901b025a", + "parent_gene": "", + "protein_md5": "a6f488e8d5e1788f9d33cbdccdd2e982", + "protein_translation": "MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYVRLMSVTLN", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006656" + ], + [ + "gene_synonym", + "ECK1997" + ], + [ + "gene_synonym", + "EcoGene:EG13388" + ], + [ + "gene_synonym", + "GI:16129945" + ], + [ + "gene_synonym", + "GeneID:946510" + ], + [ + "gene_synonym", + "JW1986" + ], + [ + "gene_synonym", + "NP_416508.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76364" + ], + [ + "gene_synonym", + "b2004" + ], + [ + "gene_synonym", + "cbeA" + ], + [ + "gene_synonym", + "yeeU" + ] + ], + "dna_sequence": "GTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGTTCAGCGATGCAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCAAAGCCGATACCCTCAGCAGTTGTGATTACGTTTATCTGGCTGTTTATCCGACGCCCGAAATGAAAAATTAA", + "dna_sequence_length": 369, + "functions": [ + "CP4-44 prophage", + "cytoskeleton bundling-enhancing factor A", + "CbtA antitoxin" + ], + "id": "CDS_1985", + "location": [ + [ + "NC_000913", + 2077112, + "+", + 369 + ] + ], + "md5": "589743f6116b5f2a462109931c5df2ee", + "parent_gene": "", + "protein_md5": "90387280ed8cabcf426eb201135cb812", + "protein_translation": "MSDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKADTLSSCDYVYLAVYPTPEMKN", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006659" + ], + [ + "gene_synonym", + "ECK1998" + ], + [ + "gene_synonym", + "EcoGene:EG13389" + ], + [ + "gene_synonym", + "GI:16129946" + ], + [ + "gene_synonym", + "GeneID:946534" + ], + [ + "gene_synonym", + "JW1987" + ], + [ + "gene_synonym", + "NP_416509.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64524" + ], + [ + "gene_synonym", + "b2005" + ], + [ + "gene_synonym", + "cbtA" + ], + [ + "gene_synonym", + "yeeV" + ] + ], + "dna_sequence": "ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTCAGCGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGACAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA", + "dna_sequence_length": 375, + "functions": [ + "CP4-44 prophage", + "toxin of the YeeV-YeeU toxin-antitoxin system" + ], + "id": "CDS_1986", + "location": [ + [ + "NC_000913", + 2077569, + "+", + 375 + ] + ], + "md5": "e459d8928f21f1d02d217e7741e0036c", + "parent_gene": "", + "protein_md5": "d29e3bb2a82d79bec326de51a6fca17d", + "protein_translation": "MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006661" + ], + [ + "gene_synonym", + "ECK1999" + ], + [ + "gene_synonym", + "EcoGene:EG13390" + ], + [ + "gene_synonym", + "GeneID:946535" + ], + [ + "gene_synonym", + "JW1988" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64526" + ], + [ + "gene_synonym", + "b2006" + ], + [ + "gene_synonym", + "yeeW" + ] + ], + "dna_sequence": "ATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAGGCCGCTGAAAACGGTTATTCACTCCGCGTGGTGGATGACCGTGACTCTACCGAAACACCGGCAACT", + "dna_sequence_length": 168, + "id": "CDS_1987", + "location": [ + [ + "NC_000913", + 2077940, + "+", + 168 + ] + ], + "md5": "ae63c3d575885de7b970a8eb11ac694f", + "parent_gene": "", + "protein_md5": "8a5b6a16f0bad15ba95e8ee37ad3ced8", + "protein_translation": "MMTLEADSVNVQALDMGHIVVDIDGVNITELINKAAENGYSLRVVDDRDSTETPAT", + "protein_translation_length": 56, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4443" + ], + [ + "gene_synonym", + "EcoGene:EG14362" + ], + [ + "gene_synonym", + "GeneID:5625568" + ], + [ + "gene_synonym", + "b4642" + ], + [ + "gene_synonym", + "yoeD" + ] + ], + "dna_sequence": "GGCACCTGCCGTCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAA", + "dna_sequence_length": 129, + "id": "CDS_1988", + "location": [ + [ + "NC_000913", + 2078677, + "-", + 129 + ] + ], + "md5": "974030ee1107a39f60c6a8887e5d80c1", + "parent_gene": "", + "protein_md5": "e5106e9fbbf92d52bbd5cabcaf8ab758", + "protein_translation": "GTCRLNGIDPEAYLRHILSILPEWPSNRVDELLPWNVVLTNK", + "protein_translation_length": 42, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285059" + ], + [ + "gene_synonym", + "ECK2000" + ], + [ + "gene_synonym", + "EcoGene:EG14425" + ], + [ + "gene_synonym", + "GeneID:1450273" + ], + [ + "gene_synonym", + "JW5328" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EES3" + ], + [ + "gene_synonym", + "b4538" + ], + [ + "gene_synonym", + "yoeF" + ] + ], + "dna_sequence": "GCCATGAATCACCCGGTCATTGGAGTAGTAACCAAAGCAGATTTAGCCAGCATGGAACAAATATCTTTGGTGAAAAGTTGGTTACGGGAAGCTGGAGCGCACAACGTGTTAGTAACCAGTGCAGTTAATAACAATGGAGTTACAGAACTTTTTGCCTTGCTGCATACAGAAGAAGGCTGTTGTTAA", + "dna_sequence_length": 186, + "id": "CDS_1989", + "location": [ + [ + "NC_000913", + 2078746, + "+", + 186 + ] + ], + "md5": "e4761f4dc6f8c7094f7840d23453c689", + "parent_gene": "", + "protein_md5": "5494bb3d68fe043aaae9f66b5cd34afb", + "protein_translation": "AMNHPVIGVVTKADLASMEQISLVKSWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCC", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006663" + ], + [ + "gene_synonym", + "ECK2001" + ], + [ + "gene_synonym", + "EcoGene:EG13391" + ], + [ + "gene_synonym", + "GI:145698283" + ], + [ + "gene_synonym", + "GeneID:946541" + ], + [ + "gene_synonym", + "JW1989" + ], + [ + "gene_synonym", + "NP_416511.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8M6" + ], + [ + "gene_synonym", + "b2007" + ], + [ + "gene_synonym", + "yeeX" + ] + ], + "dna_sequence": "ATGGAAACTACCAAGCCTTCATTCCAGGACGTACTGGAATTTGTTCGTCTGTTCCGTCGTAAGAACAAACTGCAACGTGAAATTCAGGACGTTGAGAAAAAGATCCGTGACAACCAGAAGCGCGTCCTGCTGCTGGACAACCTGAGCGATTACATCAAGCCGGGGATGAGCGTTGAAGCAATCCAGGGCATCATCGCCAGCATGAAAGGTGACTATGAAGATCGCGTTGACGATTACATCATCAAAAATGCCGAGCTCTCCAAAGAACGCCGCGATATCTCCAAAAAGCTGAAAGCTATGGGCGAAATGAAAAACGGCGAAGCGAAGTAA", + "dna_sequence_length": 330, + "functions": [ + "UPF0265 family protein" + ], + "id": "CDS_1990", + "location": [ + [ + "NC_000913", + 2079361, + "-", + 330 + ] + ], + "md5": "c20f3ad90cc4551ee2c42de9cc8a1b8f", + "parent_gene": "", + "protein_md5": "cde4763fcefe996b6c1cff110f9aa96b", + "protein_translation": "METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006667" + ], + [ + "gene_synonym", + "ECK2002" + ], + [ + "gene_synonym", + "EcoGene:EG11891" + ], + [ + "gene_synonym", + "GI:16129949" + ], + [ + "gene_synonym", + "GeneID:946545" + ], + [ + "gene_synonym", + "JW1990" + ], + [ + "gene_synonym", + "NP_416512.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33011" + ], + [ + "gene_synonym", + "b2008" + ], + [ + "gene_synonym", + "yeeA" + ] + ], + "dna_sequence": "GTGCGTGCCGATAAGTCATTAAGCCCGTTTGAAATCCGGGTATACCGCCATTACCGCATTGTGCATGGTACTCGGGTCGCGCTGGCATTCCTGCTCACTTTTCTCATTATCCGCCTGTTTACTATCCCGGAAAGCACCTGGCCGCTGGTCACCATGGTGGTGATTATGGGGCCAATCTCGTTCTGGGGTAACGTTGTCCCTCGCGCCTTTGAGCGTATTGGCGGTACGGTGTTGGGTTCGATTTTAGGTCTTATCGCTCTGCAACTGGAGTTAATCTCGTTACCGCTGATGTTAGTCTGGTGCGCGGCGGCCATGTTCCTTTGCGGTTGGCTGGCGCTGGGCAAGAAACCGTATCAAGGTTTATTGATTGGGGTGACGCTGGCAATTGTTGTGGGTTCCCCGACAGGTGAAATTGATACGGCGTTATGGCGAAGCGGCGATGTGATCCTCGGCTCTTTACTGGCAATGTTGTTTACCGGTATCTGGCCACAACGGGCGTTCATCCACTGGCGCATTCAACTGGCGAAAAGTCTGACCGAGTATAATCGGGTCTATCAATCTGCATTCTCACCGAACTTACTCGAACGCCCACGTCTGGAAAGCCATCTACAAAAACTCCTGACCGATGCCGTGAAAATGCGTGGACTGATTGCGCCCGCCAGCAAAGAAACCCGTATTCCAAAATCGATATATGAAGGTATCCAGACCATTAACCGCAATCTGGTTTGTATGCTGGAGTTGCAAATCAATGCATACTGGGCCACGCGCCCCAGCCATTTCGTGTTATTGAACGCGCAAAAACTTCGTGATACCCAGCACATGATGCAGCAAATACTGCTGAGCCTTGTTCATGCGCTGTACGAAGGTAATCCGCAGCCGGTTTTTGCCAATACGGAAAAATTGAACGATGCTGTGGAAGAGCTGCGTCAGTTGCTCAATAACCACCATGACCTGAAGGTTGTGGAAACACCAATCTATGGTTATGTGTGGCTGAACATGGAAACGGCGCATCAGCTTGAGTTGCTATCGAATCTGATTTGCCGGGCCTTGCGCAAATAA", + "dna_sequence_length": 1059, + "functions": [ + "putative transporter, FUSC family inner membrane protein" + ], + "id": "CDS_1991", + "location": [ + [ + "NC_000913", + 2080591, + "-", + 1059 + ] + ], + "md5": "8702d3ea923002872b0fd704e1201d8b", + "parent_gene": "", + "protein_md5": "8a8ed1cbc26a922156116f8ad2a657d3", + "protein_translation": "MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPISFWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006670" + ], + [ + "gene_synonym", + "ECK2003" + ], + [ + "gene_synonym", + "EcoGene:EG11892" + ], + [ + "gene_synonym", + "GI:16129950" + ], + [ + "gene_synonym", + "GeneID:946546" + ], + [ + "gene_synonym", + "JW1991" + ], + [ + "gene_synonym", + "NP_416513.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33012" + ], + [ + "gene_synonym", + "b2009" + ], + [ + "gene_synonym", + "dgi" + ], + [ + "gene_synonym", + "gyrI" + ], + [ + "gene_synonym", + "sbmC" + ], + [ + "gene_synonym", + "yeeB" + ] + ], + "dna_sequence": "ATGAACTACGAGATTAAGCAGGAAGAGAAACGTACCGTTGCAGGTTTCCATCTCGTTGGCCCGTGGGAACAGACGGTAAAGAAAGGCTTTGAGCAGTTGATGATGTGGGTAGATAGCAAAAATATTGTGCCGAAGGAGTGGGTTGCTGTCTATTACGACAATCCAGATGAAACACCCGCCGAAAAATTACGCTGCGACACCGTCGTGACGGTGCCGGGTTACTTTACGCTTCCCGAAAACAGTGAGGGCGTCATTCTGACAGAAATTACAGGTGGTCAGTATGCGGTGGCGGTAGCTCGTGTAGTCGGTGATGATTTTGCTAAACCCTGGTATCAGTTCTTTAATAGTCTCTTGCAGGACAGTGCTTATGAAATGTTACCAAAGCCCTGCTTCGAGGTTTATTTGAACAATGGCGCGGAAGATGGGTACTGGGATATCGAAATGTATGTTGCGGTGCAGCCAAAACATCACTAA", + "dna_sequence_length": 474, + "functions": [ + "DNA gyrase inhibitor" + ], + "id": "CDS_1992", + "location": [ + [ + "NC_000913", + 2081262, + "-", + 474 + ] + ], + "md5": "0ce2ee249169f5b80841d169bbe80122", + "parent_gene": "", + "protein_md5": "8aa62ad54534691c9963a1c34edc7e3d", + "protein_translation": "MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006680" + ], + [ + "gene_synonym", + "ECK2004" + ], + [ + "gene_synonym", + "EcoGene:EG11893" + ], + [ + "gene_synonym", + "GI:162135904" + ], + [ + "gene_synonym", + "GeneID:946518" + ], + [ + "gene_synonym", + "JW5329" + ], + [ + "gene_synonym", + "NP_416514.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33013" + ], + [ + "gene_synonym", + "b2010" + ], + [ + "gene_synonym", + "dacD" + ], + [ + "gene_synonym", + "phsE" + ], + [ + "gene_synonym", + "phsF" + ], + [ + "gene_synonym", + "yeeC" + ] + ], + "dna_sequence": "TTGAAACGCCGTCTTATTATTGCTGCTTCTTTGTTCGTTTTTAACTTATCGTCTGGTTTTGCGGCGGAAAACATTCCTTTTTCACCTCAGCCTCCAGAGATTCATGCCGGGTCCTGGGTATTGATGGATTACACCACCGGTCAGATCCTCACCGCGGGTAATGAGCATCAACAGCGCAATCCCGCCAGCCTGACAAAGCTGATGACGGGTTATGTCGTGGATCGCGCTATCGATAGTCATCGCATTACGCCAGACGATATTGTCACCGTGGGGCGCGATGCGTGGGCGAAAGATAATCCGGTGTTTGTCGGTTCTTCACTGATGTTTTTGAAAGAGGGCGATCGCGTATCGGTACGTGATTTAAGCCGTGGTTTAATTGTGGATTCCGGAAATGACGCTTGTGTTGCTCTGGCTGACTATATTGCCGGTGGGCAACGGCAGTTTGTTGAAATGATGAACAACTATGCCGAGAAGCTGCATCTCAAGGATACGCATTTTGAAACAGTGCATGGTCTGGATGCACCTGGCCAGCATAGCTCGGCTTATGATTTAGCTGTGCTTTCTCGTGCTATCATCCACGGCGAGCCCGAGTTTTATCATATGTACAGTGAGAAAAGTCTCACCTGGAACGGTATCACCCAGCAAAACCGTAACGGGTTGTTGTGGGATAAAACCATGAATGTTGACGGCCTGAAAACGGGTCATACTTCTGGTGCCGGGTTTAATCTCATTGCTTCGGCTGTAGATGGGCAGCGTCGTCTCATTGCAGTGGTAATGGGGGCTGACAGTGCAAAAGGTCGTGAGGAAGAGGCAAGAAAATTACTGCGTTGGGGGCAACAAAACTTTACTACGGTGCAAATTTTGCACCGTGGGAAAAAGGTCGGAACGGAACGCATCTGGTATGGCGATAAAGAAAATATCGACCTGGGAACGGAACAAGAGTTCTGGATGGTGCTACCGAAAGCCGAAATTCCACATATCAAAGCCAAATATACCCTTGATGGTAAAGAACTCACCGCGCCAATTAGCGCCCATCAGCGGGTAGGGGAAATTGAACTTTACGACCGTGATAAACAGGTGGCGCACTGGCCGCTGGTTACCCTGGAATCTGTCGGGGAAGGCAGCATGTTTTCTCGCCTGAGTGATTATTTCCACCATAAGGCCTGA", + "dna_sequence_length": 1167, + "functions": [ + "D-alanyl-D-alanine carboxypeptidase", + "penicillin-binding protein 6b" + ], + "id": "CDS_1993", + "location": [ + [ + "NC_000913", + 2082547, + "-", + 1167 + ] + ], + "md5": "63cdd18d62fb1bab68c22e5d907e50e2", + "parent_gene": "", + "protein_md5": "f127034441895bbf923e978dec500d2d", + "protein_translation": "MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDKQVAHWPLVTLESVGEGSMFSRLSDYFHHKA", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006686" + ], + [ + "gene_synonym", + "ECK2005" + ], + [ + "gene_synonym", + "EcoGene:EG10926" + ], + [ + "gene_synonym", + "GI:16129952" + ], + [ + "gene_synonym", + "GeneID:946529" + ], + [ + "gene_synonym", + "JW1993" + ], + [ + "gene_synonym", + "NP_416515.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04995" + ], + [ + "gene_synonym", + "b2011" + ], + [ + "gene_synonym", + "cpeA" + ], + [ + "gene_synonym", + "sbcB" + ], + [ + "gene_synonym", + "xonA" + ] + ], + "dna_sequence": "ATGATGAATGACGGTAAGCAACAATCTACCTTTTTGTTTCACGATTACGAAACCTTTGGCACGCACCCCGCGTTAGATCGCCCTGCACAGTTCGCAGCCATTCGCACCGATAGCGAATTCAATGTCATCGGCGAACCCGAAGTCTTTTACTGCAAGCCCGCTGATGACTATTTACCCCAGCCAGGAGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCTTACGCCTGGAGCTGGCAGCATGATAACTCGCGCTGGGATTTACTGGATGTTATGCGTGCCTGTTATGCCCTGCGCCCGGAAGGAATAAACTGGCCTGAAAATGATGACGGTCTACCGAGCTTTCGCCTTGAGCATTTAACCAAAGCGAATGGTATTGAACATAGCAACGCCCACGATGCGATGGCTGATGTGTACGCCACTATTGCGATGGCAAAGCTGGTAAAAACGCGTCAGCCACGCCTGTTTGATTATCTCTTTACCCATCGTAATAAACACAAACTGATGGCGTTGATTGATGTTCCGCAGATGAAACCCCTGGTGCACGTTTCCGGAATGTTTGGAGCATGGCGCGGCAATACCAGCTGGGTGGCACCGCTGGCGTGGCATCCTGAAAATCGCAATGCCGTAATTATGGTGGATTTGGCAGGAGACATTTCGCCATTACTGGAACTGGATAGCGACACATTGCGCGAGCGTTTATATACCGCAAAAACCGATCTTGGCGATAACGCCGCCGTTCCGGTTAAGCTGGTGCATATCAATAAATGTCCGGTGCTGGCCCAGGCGAATACGCTACGCCCGGAAGATGCCGACCGACTGGGAATTAATCGTCAGCATTGCCTCGATAACCTGAAAATTCTGCGTGAAAATCCGCAAGTGCGCGAAAAAGTGGTGGCGATATTCGCGGAAGCCGAACCGTTTACGCCTTCAGATAACGTGGATGCACAGCTTTATAACGGCTTTTTCAGTGACGCAGATCGTGCAGCAATGAAAATTGTGCTGGAAACCGAGCCGCGTAATTTACCGGCACTGGATATCACTTTTGTTGATAAACGGATTGAAAAGCTGTTGTTCAATTATCGGGCACGCAACTTCCCGGGGACGCTGGATTATGCCGAGCAGCAACGCTGGCTGGAGCACCGTCGCCAGGTCTTCACGCCAGAGTTTTTGCAGGGTTATGCTGATGAATTGCAGATGCTGGTACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAA", + "dna_sequence_length": 1428, + "functions": [ + "exodeoxyribonuclease I", + "exonuclease I" + ], + "id": "CDS_1994", + "location": [ + [ + "NC_000913", + 2082756, + "+", + 1428 + ] + ], + "md5": "dd8e8e4b18a0bc2c2f7bb7bf0559a559", + "parent_gene": "", + "protein_md5": "290fed04c1ca845b6ec36e17632b3337", + "protein_translation": "MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLVQQYADDKEKVALLKALWQYAEEIV", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006688" + ], + [ + "gene_synonym", + "ECK2006" + ], + [ + "gene_synonym", + "EcoGene:EG11894" + ], + [ + "gene_synonym", + "GI:16129953" + ], + [ + "gene_synonym", + "GeneID:946539" + ], + [ + "gene_synonym", + "JW1994" + ], + [ + "gene_synonym", + "NP_416516.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33014" + ], + [ + "gene_synonym", + "b2012" + ], + [ + "gene_synonym", + "yeeD" + ] + ], + "dna_sequence": "ATGGTGATTAAAAAGCTGGATGTGGTGACGCAGGTCTGTCCGTTTCCACTCATAGAAGCAAAAGCAGCTCTGGCAGAAATGGTCAGCGGCGATGAGTTAGTGATTGAGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGA", + "dna_sequence_length": 228, + "functions": [ + "putative TusA family sulfurtransferase" + ], + "id": "CDS_1995", + "location": [ + [ + "NC_000913", + 2084453, + "-", + 228 + ] + ], + "md5": "47d1438a81192aafe093d352cbe8da0f", + "parent_gene": "", + "protein_md5": "4b456bcd106a32420eb773446fea10a3", + "protein_translation": "MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006691" + ], + [ + "gene_synonym", + "ECK2007" + ], + [ + "gene_synonym", + "EcoGene:EG11895" + ], + [ + "gene_synonym", + "GI:16129954" + ], + [ + "gene_synonym", + "GeneID:946526" + ], + [ + "gene_synonym", + "JW1995" + ], + [ + "gene_synonym", + "NP_416517.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33015" + ], + [ + "gene_synonym", + "b2013" + ], + [ + "gene_synonym", + "yeeE" + ] + ], + "dna_sequence": "ATGTTTTCAATGATATTAAGCGGGCTAATTTGTGGTGCTCTGCTGGGATTTGTCATGCAGCGTGGGCGTTTTTGCCTGACAGGTGGTTTTCGCGATATGTATATCGTGAAAAATAATCGCATGTTTTACGCCTTGCTGATTGCAATTTCGGTACAAAGCGTGGGGGTTTTTGCGTTAATTCAGGCGGGCCTACTGACTTACGAAGCCGGGGCGTTCCCGTGGCTTGGTACTGTTATAGGTGGGTATATCTTCGGGCTGGGAATTGTTCTGGCGGGTGGATGTGCCACCGGGACCTGGTATCGCGCGGGTGAGGGATTGATCGGCAGTTGGATCGCGCTTTTCACTTATATGGTGATGAGTGCGGTGATGCGTTCTCCACATGCCAGTGGTTTAAATCAAACCTTGCAGCACTACAGTACTGAACATAACTCTATTGCTGAGACTTTTAATTTGTCTGTGTGGCCGTTGGTTGCCGTTTTGCTGGTGATAACGCTCTGGGTGGTGATGAAAGAGTTGAAGAAGCCAAAACTCAAAGTCGCGACCTTACCGCCGCGCCGAACCGGGATCGCTCATATTCTGTTTGAAAAACGCTGGCATCCCTTTGTCACAGCTGTACTCATCGGTTTGATTGCGCTTTTAGCCTGGCCCCTGAGTGAAGCAACCGGACGCATGTTTGGGTTAGGAATCACTTCCCCAACGGCCAATATTCTGCAATTTCTGGTCGCGGGTGACATGAAATACATTAACTGGGGCGTTTTCCTGGTGTTAGGGATCTTCGTGGGGTCATTTATTGCAGCCAAAGCGAGCCGTGAGTTCCGCGTTCGCGCAGCTGATGCACAAACAACATTACGTAGCGGGTTAGGTGGTGTACTGATGGGCTTCGGTGCCAGTATTGCAGGTGGTTGCTCTATCGGTAATGGACTGGTTATGACTGCAATGATGACCTGGCAGGGCTGGATTGGCCTTGTATTTATGATTCTCGGAGTCTGGACTGCGTCCTGGCTTGTGTATGTTCGACCGCAGCGTAAGGCGCGACTGGCAACTGCTGCGGCAAATTAA", + "dna_sequence_length": 1059, + "functions": [ + "UPF0394 family inner membrane protein" + ], + "id": "CDS_1996", + "location": [ + [ + "NC_000913", + 2085525, + "-", + 1059 + ] + ], + "md5": "4d72d8a000da90454540c6973c9add49", + "parent_gene": "", + "protein_md5": "05445b165ecac79a9c17447415c76b77", + "protein_translation": "MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIVKNNRMFYALLIAISVQSVGVFALIQAGLLTYEAGAFPWLGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVLLVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDMKYINWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006696" + ], + [ + "gene_synonym", + "ECK2008" + ], + [ + "gene_synonym", + "EcoGene:EG11896" + ], + [ + "gene_synonym", + "GI:90111370" + ], + [ + "gene_synonym", + "GeneID:946533" + ], + [ + "gene_synonym", + "JW5330" + ], + [ + "gene_synonym", + "NP_416518.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA47" + ], + [ + "gene_synonym", + "b2014" + ], + [ + "gene_synonym", + "plaP" + ], + [ + "gene_synonym", + "yeeF" + ] + ], + "dna_sequence": "ATGTCGCATAACGTTACTCCAAACACCTCTCGCGTGGAATTGCGTAAAACGCTTACGTTAGTTCCGGTTGTAATGATGGGTCTTGCCTATATGCAGCCGATGACGCTGTTTGATACTTTTGGTATCGTTTCAGGCCTCACGGATGGTCATGTGCCGACAGCCTATGCGTTCGCATTGATTGCGATCCTGTTTACGGCTCTGAGCTACGGGAAGCTGGTTCGCCGCTATCCTTCTGCTGGCTCTGCATACACTTACGCCCAGAAATCCATTAGCCCGACTGTCGGCTTTATGGTGGGTTGGTCTTCTCTGCTCGACTATCTGTTCGCGCCGATGATCAACATTCTACTGGCGAAAATCTATTTTGAAGCTCTGGTGCCTTCCATCCCATCGTGGATGTTTGTGGTGGCGCTGGTGGCCTTTATGACCGCCTTTAACCTGCGTAGTCTGAAATCCGTAGCGAACTTCAACACTGTAATCGTCGTGTTGCAGGTAGTGCTGATCGCGGTGATTCTGGGCATGGTTGTTTATGGCGTATTTGAAGGTGAAGGCGCTGGTACGCTGGCGAGCACTCGTCCATTCTGGTCTGGCGATGCGCATGTTATCCCGATGATTACCGGGGCGACAATCCTGTGCTTCTCCTTTACCGGCTTTGACGGCATCAGCAACCTGTCGGAAGAAACCAAAGATGCAGAGCGCGTGATCCCGCGTGCGATTTTCCTGACCGCGCTGATCGGCGGCATGATCTTCATCTTTGCAACTTACTTCCTGCAGCTGTACTTCCCGGATATCTCTCGCTTTAAAGATCCGGATGCGTCACAGCCTGAAATCATGCTGTACGTTGCGGGTAAAGCGTTCCAGGTTGGCGCGCTGATCTTCTCCACCATTACCGTACTGGCGTCCGGTATGGCGGCGCATGCAGGCGTAGCGCGTCTGATGTACGTAATGGGTCGTGACGGCGTATTCCCGAAAAGCTTCTTCGGTTATGTACACCCGAAATGGCGTACTCCGGCGATGAACATCATCCTGGTTGGCGCGATTGCCCTGCTGGCAATCAACTTCGACCTGGTAATGGCAACGGCGCTGATTAACTTTGGTGCGCTGGTGGCGTTCACTTTCGTTAACCTGTCGGTCATCTCGCAGTTCTGGATCCGTGAGAAGCGTAACAAGACGCTGAAAGATCACTTCCAGTATCTGTTCCTGCCGATGTGTGGTGCGCTGACCGTTGGTGCGCTGTGGGTTAACCTGGAAGAAAGCTCAATGGTTCTGGGTCTGATCTGGGCTGCTATCGGTCTGATTTACCTGGCTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAA", + "dna_sequence_length": 1359, + "functions": [ + "putrescine importer, low affinity" + ], + "id": "CDS_1997", + "location": [ + [ + "NC_000913", + 2087062, + "-", + 1359 + ] + ], + "md5": "f86f0a9b797368dd19a529801b82cac7", + "parent_gene": "", + "protein_md5": "e1b90d9cdd851d1aafe09ff98143aef9", + "protein_translation": "MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIVVLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEIMLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYEDVA", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4493" + ], + [ + "gene_synonym", + "EcoGene:EG14483" + ], + [ + "gene_synonym", + "GI:226524728" + ], + [ + "gene_synonym", + "GeneID:7751643" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P606" + ], + [ + "gene_synonym", + "YP_002791246.1" + ], + [ + "gene_synonym", + "b4678" + ], + [ + "gene_synonym", + "yoeI" + ] + ], + "dna_sequence": "ATGGGGCAATTTTTTGCTTACGCGACGGTTATCACCGTAAAGGAGAATGACCATGTCGCATAA", + "dna_sequence_length": 63, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1998", + "location": [ + [ + "NC_000913", + 2087114, + "-", + 63 + ] + ], + "md5": "825c423dbb4cea83f9ec6f82296473be", + "parent_gene": "", + "protein_md5": "9139e51a0097ebbff75f9f9735dc7d85", + "protein_translation": "MGQFFAYATVITVKENDHVA", + "protein_translation_length": 20, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006700" + ], + [ + "gene_synonym", + "ECK2009" + ], + [ + "gene_synonym", + "EcoGene:EG13392" + ], + [ + "gene_synonym", + "GI:90111371" + ], + [ + "gene_synonym", + "GeneID:946532" + ], + [ + "gene_synonym", + "JW5834" + ], + [ + "gene_synonym", + "NP_416519.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76369" + ], + [ + "gene_synonym", + "b2015" + ], + [ + "gene_synonym", + "yeeY" + ] + ], + "dna_sequence": "ATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGAAAAAGAAGGCAGTTTTGCGGCGGCGTCGGCCAAACTCTACAAGACGCCGTCCGCTCTGAGTTACACCGTTCACAAGCTGGAAAGCGACCTTAATATTCAATTGCTTGATCGTAGCGGACACCGCGCTAAATTCACCCGCACCGGAAAAATGTTATTAGAGAAAGGGCGGGAAGTTCTGCATACCGTGCGGGAACTGGAAAAGCAGGCGATCAAACTGCATGAAGGCTGGGAAAACGAGCTGGTGATTGGCGTGGACGACACGTTTCCTTTTTCTCTGCTTGCGCCACTCATTGAAGCTTTTTATCAACATCATAGCGTGACGCGCCTGAAGTTTATCAATGGCGTACTCGGTGGTTCATGGGATGCCCTGACTCAGGGGCGAGCGGATATTATTGTTGGCGCGATGCATGAGCCACCATCTTCCAGTGAGTTTGGTTTTTCACGGTTGGGCGATCTGGAACAAGTCTTTGCGGTCGCGCCTCATCATCCGTTAGCCCTGGAAGAAGAGCCGTTAAATCGTCGTATTATTAAGCGATATCGGGCGATTGTGGTGGGGGATACTGCGCAGGCAGGCGCTTCTACGGCATCACAACTTCTCGACGAACAAGAAGCCATTACCGTTTTCGATTTTAAAACCAAACTGGAGCTGCAAATTAGCGGCCTCGGCTGCGGCTATTTACCCCGTTATCTGGCGCAACGTTTTCTCGATAGTGGCGCGTTAATCGAGAAGAAAGTGGTCGCCCAAACTCTCTTTGAACCCGTCTGGATTGGCTGGAACGAACAGACCGCAGGACTTGCCAGTGGCTGGTGGCGGGATGAAATTTTAGCAAATAGTGCGATCGCCGGTGTTTATGCAAAATCTGATGACGGAAAATCAGCCATTTAA", + "dna_sequence_length": 930, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_1999", + "location": [ + [ + "NC_000913", + 2088258, + "-", + 930 + ] + ], + "md5": "cb13283c8f40c0749398bf50849eb94f", + "parent_gene": "", + "protein_md5": "5d4ad086607d6ea2ee611ce9c87339f8", + "protein_translation": "MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYAKSDDGKSAI", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006702" + ], + [ + "gene_synonym", + "ECK2010" + ], + [ + "gene_synonym", + "EcoGene:EG13393" + ], + [ + "gene_synonym", + "GI:16129957" + ], + [ + "gene_synonym", + "GeneID:946538" + ], + [ + "gene_synonym", + "JW1998" + ], + [ + "gene_synonym", + "NP_416520.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD12" + ], + [ + "gene_synonym", + "b2016" + ], + [ + "gene_synonym", + "yeeZ" + ] + ], + "dna_sequence": "ATGAAAAAGGTCGCAATTGTCGGGTTAGGGTGGTTAGGCATGCCGCTGGCGATGTCACTTTCAGCGCGAGGCTGGCAAGTCACCGGGAGTAAAACCACACAAGATGGTGTCGAAGCGGCCCGAATGAGTGGCATTGATAGCTATCTGCTTCGCATGGAGCCTGAGCTAGTTTGCGATTCTGACGATCTGGATGCCCTGATGGATGCCGATGCGCTGGTCATTACGCTTCCGGCACGTCGTAGCGGCCCCGGCGATGAGTTCTATTTACAAGCGGTACAAGAGTTAGTGGATAGCGCGCTGGCCCATCGTATTCCCCGCATTATTTTTACCAGCTCAACATCTGTCTATGGCGACGCGCAAGGCACGGTGAAAGAAACCACCCCGCGTAATCCAGTAACCAACAGTGGACGAGTATTAGAAGAACTCGAAGACTGGCTGCACAATTTACCCGGTACTTCGGTCGATATTCTGCGTCTTGCGGGCCTGGTCGGACCGGGACGTCATCCCGGACGCTTCTTTGCCGGAAAAACCGCGCCTGATGGTGAACATGGTGTTAATTTAGTCCATTTAGAAGATGTTATTGGCGCTATCACTCTGTTGTTACAGGCACCTAAAGGCGGACACATCTATAATATATGTGCGCCAGCTCACCCTGCGCGTAATGTTTTCTATCCGCAGATGGCCCGTTTACTGGGGCTGGAACCTCCGCAGTTCAGAAATAGTCTGGACAGCGGCAAAGGTAAGATTATTGATGGCAGTCGGATTTGTAATGAACTGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAA", + "dna_sequence_length": 825, + "functions": [ + "putative epimerase" + ], + "id": "CDS_2000", + "location": [ + [ + "NC_000913", + 2089128, + "-", + 825 + ] + ], + "md5": "b37d06ac28dc008a71c90829c85d3efd", + "parent_gene": "", + "protein_md5": "6ca00c54ed8f1b5d8329051e1839dbf9", + "protein_translation": "MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285060" + ], + [ + "gene_synonym", + "ECK2011" + ], + [ + "gene_synonym", + "EcoGene:EG14356" + ], + [ + "gene_synonym", + "GI:94541116" + ], + [ + "gene_synonym", + "GeneID:1450274" + ], + [ + "gene_synonym", + "JW5331" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69348" + ], + [ + "gene_synonym", + "YP_588458.1" + ], + [ + "gene_synonym", + "b4539" + ], + [ + "gene_synonym", + "yoeB" + ] + ], + "dna_sequence": "GTGAAACTAATCTGGTCTGAGGAATCATGGGACGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGATCAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAGGTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGTCGTTATCATTATTGA", + "dna_sequence_length": 255, + "functions": [ + "toxin of the YoeB-YefM toxin-antitoxin system" + ], + "id": "CDS_2001", + "location": [ + [ + "NC_000913", + 2089465, + "-", + 255 + ] + ], + "md5": "b80c40f1524bf0306db2da54cf73d614", + "parent_gene": "", + "protein_md5": "411587148d95097537c316c67e7e3072", + "protein_translation": "MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006705" + ], + [ + "gene_synonym", + "ECK2012" + ], + [ + "gene_synonym", + "EcoGene:EG12844" + ], + [ + "gene_synonym", + "GI:90111372" + ], + [ + "gene_synonym", + "GeneID:946542" + ], + [ + "gene_synonym", + "JW5835" + ], + [ + "gene_synonym", + "NP_416521.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69346" + ], + [ + "gene_synonym", + "b2017" + ], + [ + "gene_synonym", + "yefM" + ] + ], + "dna_sequence": "ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGATCCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATCTACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGACATCATTGAGTGA", + "dna_sequence_length": 252, + "functions": [ + "antitoxin of the YoeB-YefM toxin-antitoxin system" + ], + "id": "CDS_2002", + "location": [ + [ + "NC_000913", + 2089713, + "-", + 252 + ] + ], + "md5": "abb18b5b20dcc8b7b74de7586a83a7d2", + "parent_gene": "", + "protein_md5": "62f87881f58f77a8358f450a95407e24", + "protein_translation": "MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006710" + ], + [ + "gene_synonym", + "ECK2013" + ], + [ + "gene_synonym", + "EcoGene:EG11269" + ], + [ + "gene_synonym", + "GI:16129959" + ], + [ + "gene_synonym", + "GeneID:946547" + ], + [ + "gene_synonym", + "JW2000" + ], + [ + "gene_synonym", + "NP_416522.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60995" + ], + [ + "gene_synonym", + "b2018" + ], + [ + "gene_synonym", + "hisL" + ] + ], + "dna_sequence": "ATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAG", + "dna_sequence_length": 51, + "functions": [ + "his operon leader peptide" + ], + "id": "CDS_2003", + "location": [ + [ + "NC_000913", + 2089996, + "+", + 51 + ] + ], + "md5": "396765bfdae4c9ce9362931fd1286f0b", + "parent_gene": "", + "protein_md5": "115d5a4081836103ad363b4a5bd0f9dd", + "protein_translation": "MTRVQFKHHHHHHHPD", + "protein_translation_length": 16, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006713" + ], + [ + "gene_synonym", + "ECK2014" + ], + [ + "gene_synonym", + "EcoGene:EG10449" + ], + [ + "gene_synonym", + "GI:16129960" + ], + [ + "gene_synonym", + "GeneID:946549" + ], + [ + "gene_synonym", + "JW2001" + ], + [ + "gene_synonym", + "NP_416523.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60757" + ], + [ + "gene_synonym", + "b2019" + ], + [ + "gene_synonym", + "hisG" + ] + ], + "dna_sequence": "ATGACAGACAACACTCGTTTACGCATAGCTATGCAGAAATCCGGCCGTTTAAGTGATGACTCACGCGAATTGCTGGCGCGCTGTGGCATTAAAATTAATCTTCACACCCAGCGCCTGATCGCGATGGCAGAAAACATGCCGATTGATATTCTGCGCGTGCGTGACGACGACATTCCCGGTCTGGTAATGGATGGCGTGGTAGACCTTGGGATTATCGGCGAAAACGTGCTGGAAGAAGAGCTGCTTAACCGCCGCGCCCAGGGTGAAGATCCACGCTACTTTACCCTGCGTCGTCTGGATTTCGGCGGCTGTCGTCTTTCGCTGGCAACGCCGGTTGATGAAGCCTGGGACGGTCCGCTCTCCTTAAACGGTAAACGTATCGCCACCTCTTATCCTCACCTGCTCAAGCGTTATCTCGACCAGAAAGGCATCTCTTTTAAATCCTGCTTACTGAACGGTTCTGTTGAAGTCGCCCCGCGTGCCGGACTGGCGGATGCGATTTGCGATCTGGTTTCCACCGGTGCCACGCTGGAAGCTAACGGCCTGCGCGAAGTCGAAGTTATCTATCGCTCGAAAGCCTGCCTGATTCAACGCGATGGCGAAATGGAAGAATCCAAACAGCAACTGATCGACAAACTGCTGACCCGTATTCAGGGTGTGATCCAGGCGCGCGAATCAAAATACATCATGATGCACGCACCGACCGAACGTCTGGATGAAGTCATCGCCCTGCTGCCAGGTGCCGAACGCCCAACTATTCTGCCGCTGGCGGGTGACCAACAGCGCGTAGCGATGCACATGGTCAGCAGCGAAACCCTGTTCTGGGAAACCATGGAAAAACTGAAAGCGCTGGGTGCCAGTTCAATTCTGGTCCTGCCGATTGAGAAGATGATGGAGTGA", + "dna_sequence_length": 900, + "functions": [ + "ATP phosphoribosyltransferase" + ], + "id": "CDS_2004", + "location": [ + [ + "NC_000913", + 2090192, + "+", + 900 + ] + ], + "md5": "be679d1d38abf81d26ac5f3fec138405", + "parent_gene": "", + "protein_md5": "ade076102156db772f5271aaa33a8a32", + "protein_translation": "MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006715" + ], + [ + "gene_synonym", + "ECK2015" + ], + [ + "gene_synonym", + "EcoGene:EG10447" + ], + [ + "gene_synonym", + "GI:16129961" + ], + [ + "gene_synonym", + "GeneID:946531" + ], + [ + "gene_synonym", + "JW2002" + ], + [ + "gene_synonym", + "NP_416524.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06988" + ], + [ + "gene_synonym", + "b2020" + ], + [ + "gene_synonym", + "hisD" + ] + ], + "dna_sequence": "ATGAGCTTTAACACAATCATTGACTGGAATAGCTGTACTGCGGAGCAACAACGCCAGCTGTTAATGCGCCCGGCGATTTCCGCCTCTGAAAGCATTACCCGCACTGTTAACGATATTCTCGATAACGTGAAAGCACGCGGCGATGAGGCCCTGCGGGAATACAGCGCGAAGTTTGATAAAACCACGGTTACCGCGCTGAAGGTGTCTGCAGAGGAGATCGCCGCCGCCAGCGAACGCCTGAGCGACGAGCTAAAACAGGCGATGGCGGTGGCAGTAAAGAATATTGAAACCTTCCACACTGCGCAAAAACTGCCGCCGGTAGATGTAGAAACGCAGCCAGGCGTGCGTTGCCAGCAGGTCACGCGTCCGGTAGCTTCAGTTGGGTTGTATATTCCTGGCGGCTCCGCCCCGCTCTTCTCAACGGTATTAATGCTGGCGACTCCGGCGAGTATTGCGGGCTGTAAAAAAGTGGTGCTGTGCTCACCGCCGCCGATTGCCGATGAGATCCTTTATGCGGCGCAGCTGTGCGGTGTGCAGGACGTGTTTAACGTCGGCGGCGCACAGGCCATTGCCGCACTGGCGTTTGGTACGGAATCTGTGCCAAAAGTGGACAAAATCTTCGGGCCGGGTAACGCCTTTGTCACCGAAGCGAAACGTCAGGTGAGCCAGCGTCTGGACGGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCAACTGGCAGAACTGCCGCGTGCCGAAACCGCCCGCCAGGCACTGAACGCCAGCCGCCTGATCGTGACTAAAGATTTAGCGCAGTGCGTGGAGATCTCCAACCAGTACGGCCCGGAGCACCTGATCATTCAGACCCGCAACGCCCGTGAACTGGTCGATAGCATCACCAGCGCCGGTTCGGTATTTCTTGGTGACTGGTCACCGGAATCGGCAGGTGATTACGCCTCCGGCACCAACCACGTTCTACCGACTTACGGTTACACCGCCACCTGTTCCAGCCTCGGGCTGGCAGATTTCCAGAAGCGCATGACCGTACAGGAACTGTCGAAAGAGGGGTTCTCCGCGCTGGCTTCAACCATAGAAACACTGGCCGCCGCCGAGCGCCTGACCGCCCACAAAAATGCCGTTACTTTGCGTGTTAACGCCCTTAAGGAGCAAGCATGA", + "dna_sequence_length": 1305, + "functions": [ + "bifunctional histidinal dehydrogenase/ histidinol dehydrogenase" + ], + "id": "CDS_2005", + "location": [ + [ + "NC_000913", + 2091097, + "+", + 1305 + ] + ], + "md5": "3ac8e54c4b6852fa2ec235275f6a8204", + "parent_gene": "", + "protein_md5": "fb76d4660b71ceca854166496335aa3d", + "protein_translation": "MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006717" + ], + [ + "gene_synonym", + "ECK2016" + ], + [ + "gene_synonym", + "EcoGene:EG10446" + ], + [ + "gene_synonym", + "GI:16129962" + ], + [ + "gene_synonym", + "GeneID:946551" + ], + [ + "gene_synonym", + "JW2003" + ], + [ + "gene_synonym", + "NP_416525.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06986" + ], + [ + "gene_synonym", + "b2021" + ], + [ + "gene_synonym", + "hisC" + ] + ], + "dna_sequence": "ATGAGCACCGTGACTATTACCGATTTAGCGCGTGAAAACGTCCGCAACCTGACGCCGTATCAGTCGGCGCGTCGTCTGGGCGGTAACGGCGATGTCTGGCTGAACGCCAACGAATACCCCACTGCCGTGGAGTTTCAGCTTACTCAGCAAACGCTCAACCGCTACCCGGAATGCCAGCCGAAAGCGGTGATTGAAAATTACGCGCAATATGCAGGCGTAAAACCGGAGCAGGTGCTGGTCAGCCGTGGCGCGGACGAAGGTATTGAACTGCTGATTCGCGCTTTTTGCGAACCGGGTAAAGACGCCATCCTCTACTGCCCGCCAACGTACGGCATGTACAGCGTCAGCGCCGAAACGATTGGCGTCGAGTGCCGCACAGTGCCGACGCTGGACAACTGGCAACTGGACTTACAGGGCATTTCCGACAAGCTGGACGGCGTAAAAGTGGTTTATGTTTGCAGCCCCAATAACCCGACCGGGCAACTGATCAATCCGCAGGATTTTCGCACCCTGCTGGAGTTAACCCGCGGTAAGGCGATTGTGGTTGCCGATGAAGCCTATATCGAGTTTTGCCCGCAGGCATCGCTGGCTGGCTGGCTGGCGGAATATCCGCACCTGGCTATTTTACGCACACTGTCGAAAGCTTTTGCTCTGGCGGGGCTTCGTTGCGGATTTACGCTGGCAAACGAAGAAGTCATCAACCTGCTGATGAAAGTGATCGCCCCCTACCCGCTCTCGACGCCGGTTGCCGACATTGCGGCCCAGGCGTTAAGCCCACAGGGAATCGTCGCCATGCGCGAACGGGTAGCGCAAATTATTGCAGAACGCGAATACCTGATTGCCGCACTGAAAGAGATCCCCTGCGTAGAGCAGGTTTTCGACTCTGAAACCAACTACATTCTGGCGCGCTTTAAAGCCTCCAGTGCGGTGTTTAAATCTTTGTGGGATCAGGGCATTATCTTACGTGATCAGAATAAACAACCCTCTTTAAGCGGCTGCCTGCGAATTACCGTCGGAACCCGTGAAGAAAGCCAGCGCGTCATTGACGCCTTACGTGCGGAGCAAGTTTGA", + "dna_sequence_length": 1071, + "functions": [ + "histidinol-phosphate aminotransferase" + ], + "id": "CDS_2006", + "location": [ + [ + "NC_000913", + 2092398, + "+", + 1071 + ] + ], + "md5": "8e86eedc416d16fd2047951bae2c7476", + "parent_gene": "", + "protein_md5": "dea33edd752f8ad54e6b7172e0c08b5f", + "protein_translation": "MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006720" + ], + [ + "gene_synonym", + "ECK2017" + ], + [ + "gene_synonym", + "EcoGene:EG10445" + ], + [ + "gene_synonym", + "GI:90111373" + ], + [ + "gene_synonym", + "GeneID:946552" + ], + [ + "gene_synonym", + "JW2004" + ], + [ + "gene_synonym", + "NP_416526.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06987" + ], + [ + "gene_synonym", + "b2022" + ], + [ + "gene_synonym", + "hisB" + ] + ], + "dna_sequence": "ATGAGTCAGAAGTATCTTTTTATCGATCGCGATGGAACCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAACCGGGCGTGATCCCGGAACTGCTGAAGCTGCAAAAAGCGGGCTACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACAGGCGGATTTCGATGGCCCGCACAACCTGATGATGCAGATCTTCACCTCGCAAGGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGCCTTGCCCGCTGCGCGCTGGATATCTCTGGTCGCCCGCACCTGGAATATAAAGCCGAGTTTACCTACCAGCGCGTGGGCGATCTCAGCACCGAAATGATCGAGCACTTCTTCCGTTCGCTCTCATACACCATGGGCGTGACGCTACACCTGAAAACCAAAGGTAAAAACGATCATCACCGTGTAGAGAGTCTGTTCAAAGCCTTTGGTCGCACCCTGCGCCAGGCCATCCGCGTGGAAGGCGATACCCTGCCCTCGTCGAAAGGAGTGCTGTAA", + "dna_sequence_length": 1068, + "functions": [ + "histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase" + ], + "id": "CDS_2007", + "location": [ + [ + "NC_000913", + 2093468, + "+", + 1068 + ] + ], + "md5": "ce837e412fc2a589adfe9077cee94eec", + "parent_gene": "", + "protein_md5": "3a1dc7b17eef302acd65c1b776272a30", + "protein_translation": "MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006722" + ], + [ + "gene_synonym", + "ECK2018" + ], + [ + "gene_synonym", + "EcoGene:EG10450" + ], + [ + "gene_synonym", + "GI:16129964" + ], + [ + "gene_synonym", + "GeneID:946544" + ], + [ + "gene_synonym", + "JW2005" + ], + [ + "gene_synonym", + "NP_416527.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60595" + ], + [ + "gene_synonym", + "b2023" + ], + [ + "gene_synonym", + "hisH" + ] + ], + "dna_sequence": "ATGAACGTGGTGATCCTTGATACCGGCTGCGCCAACCTGAACTCGGTGAAGTCTGCCATTGCGCGTCACGGTTATGAACCCAAAGTCAGCCGTGACCCGGACGTCGTGTTGCTGGCCGATAAACTGTTTTTACCCGGCGTTGGCACTGCGCAAGCGGCGATGGATCAGGTACGTGAGCGCGAGCTGTTTGATCTCATCAAAGCCTGTACCCAACCGGTGCTGGGCATCTGCTTAGGGATGCAACTGCTGGGGCGGCGCAGCGAAGAGAGCAACGGCGTCGACTTGCTGGGCATCATCGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGTTCACAGCTACGCAATGCCGGTCAATCCGTGGACCATCGCCCAGTGTAATTACGGCGAACCGTTCACCGCGGCGGTACAAAAAGATAACTTCTACGGCGTGCAGTTCCACCCGGAGCGTTCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGA", + "dna_sequence_length": 591, + "functions": [ + "imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" + ], + "id": "CDS_2008", + "location": [ + [ + "NC_000913", + 2094535, + "+", + 591 + ] + ], + "md5": "8ce677f19f3277e3511374bc523a66b5", + "parent_gene": "", + "protein_md5": "238e25162c0a2ea5ef8b1029e602d964", + "protein_translation": "MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006725" + ], + [ + "gene_synonym", + "ECK2019" + ], + [ + "gene_synonym", + "EcoGene:EG10444" + ], + [ + "gene_synonym", + "GI:90111374" + ], + [ + "gene_synonym", + "GeneID:946521" + ], + [ + "gene_synonym", + "JW2006" + ], + [ + "gene_synonym", + "NP_416528.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10371" + ], + [ + "gene_synonym", + "b2024" + ], + [ + "gene_synonym", + "hisA" + ] + ], + "dna_sequence": "ATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAGGCTGGTTTGAACGCTTCGGTGCCGATGCCTTAGTGCTGGCGCTGGATGTCCGTATTGACGAGCAAGGCAACAAGCAGGTGGCAGTCAGCGGCTGGCAAGAGAACTCGGGCGTTTCACTGGAACAACTGGTGGAAACCTATCTGCCCGTCGGCCTGAAACATGTGCTGTGTACCGATATCTCGCGCGACGGCACGCTGGCAGGCTCTAACGTCTCTTTATATGAAGAAGTGTGCGCCAGATATCCGCAGGTGGCATTTCAGTCCTCCGGCGGTATTGGCGACATTGATGATGTGGCGGCCCTGCGTGGCACTGGTGTGCGCGGCGTAATAGTTGGTCGGGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAA", + "dna_sequence_length": 738, + "functions": [ + "N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase" + ], + "id": "CDS_2009", + "location": [ + [ + "NC_000913", + 2095125, + "+", + 738 + ] + ], + "md5": "0380e2a4b5f054e03a2183916e3e8d39", + "parent_gene": "", + "protein_md5": "d0e414c80f3f2a6141ce92d4c01e989d", + "protein_translation": "MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIACWQNA", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006727" + ], + [ + "gene_synonym", + "ECK2020" + ], + [ + "gene_synonym", + "EcoGene:EG10448" + ], + [ + "gene_synonym", + "GI:16129966" + ], + [ + "gene_synonym", + "GeneID:946516" + ], + [ + "gene_synonym", + "JW2007" + ], + [ + "gene_synonym", + "NP_416529.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60664" + ], + [ + "gene_synonym", + "b2025" + ], + [ + "gene_synonym", + "hisF" + ] + ], + "dna_sequence": "ATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAAGTCTCTGGAAGATGCCGCGAAAATTCTTTCCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAATGGGAAACGCTCGACTGGGTACAGGAAGTGCAAAAACGCGGTGCCGGAGAAATCGTCCTCAATATGATGAATCAGGACGGCGTGCGTAACGGTTACGACCTCGAACAACTGAAAAAAGTGCGTGAAGTTTGCCACGTCCCGCTGATTGCCTCCGGTGGCGCGGGCACCATGGAACACTTCCTCGAAGCCTTCCGCGATGCCGACGTTGACGGCGCGCTGGCAGCTTCCGTATTCCACAAACAAATAATCAATATTGGTGAATTAAAAGCGTACCTGGCAACACAGGGCGTGGAGATCAGGATATGTTAA", + "dna_sequence_length": 777, + "functions": [ + "imidazole glycerol phosphate synthase, catalytic subunit with HisH" + ], + "id": "CDS_2010", + "location": [ + [ + "NC_000913", + 2095844, + "+", + 777 + ] + ], + "md5": "519d9fe3fbc2ae2fd9a64a80af2a4afa", + "parent_gene": "", + "protein_md5": "5efa2c074e05b0c70cfb1f83c789005a", + "protein_translation": "MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006729" + ], + [ + "gene_synonym", + "ECK2021" + ], + [ + "gene_synonym", + "EcoGene:EG10451" + ], + [ + "gene_synonym", + "GI:16129967" + ], + [ + "gene_synonym", + "GeneID:946515" + ], + [ + "gene_synonym", + "JW2008" + ], + [ + "gene_synonym", + "NP_416530.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06989" + ], + [ + "gene_synonym", + "b2026" + ], + [ + "gene_synonym", + "hisE" + ], + [ + "gene_synonym", + "hisI" + ], + [ + "gene_synonym", + "hisIE" + ] + ], + "dna_sequence": "ATGTTAACAGAACAACAACGTCGCGAACTGGACTGGGAAAAAACCGACGGACTTATGCCGGTGATTGTGCAACACGCGGTATCCGGCGAAGTGCTAATGCTGGGCTATATGAACCCGGAAGCCTTAGACAAAACCCTCGAAAGCGGCAAAGTCACCTTCTTCTCGCGCACTAAACAGCGACTGTGGACCAAAGGCGAAACGTCGGGCAATTTCCTCAACGTAGTGAGTATTGCCCCGGACTGCGACAACGACACGTTACTGGTGCTGGCGAATCCCATCGGCCCGACCTGCCACAAAGGCACCAGCAGTTGCTTCGGCGACACCGCTCACCAGTGGCTGTTCCTGTATCAACTGGAACAACTGCTCGCCGAGCGCAAATCTGCCGATCCGGAAACCTCCTACACCGCCAAACTGTATGCCAGCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGA", + "dna_sequence_length": 612, + "functions": [ + "phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase" + ], + "id": "CDS_2011", + "location": [ + [ + "NC_000913", + 2096614, + "+", + 612 + ] + ], + "md5": "e154bb9cfb64128fb961d10b3cec4c14", + "parent_gene": "", + "protein_md5": "7a1d64718ed2cf5dab23fc388bfb47a9", + "protein_translation": "MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKRHQ", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006731" + ], + [ + "gene_synonym", + "ECK2022" + ], + [ + "gene_synonym", + "EcoGene:EG13406" + ], + [ + "gene_synonym", + "GI:90111375" + ], + [ + "gene_synonym", + "GeneID:946553" + ], + [ + "gene_synonym", + "JW5836" + ], + [ + "gene_synonym", + "NP_416531.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76372" + ], + [ + "gene_synonym", + "b2027" + ], + [ + "gene_synonym", + "cld" + ], + [ + "gene_synonym", + "rol" + ], + [ + "gene_synonym", + "wzz" + ], + [ + "gene_synonym", + "wzzB" + ] + ], + "dna_sequence": "ATGAGAGTAGAAAATAATAATGTTTCTGGGCAAAACCATGACCCGGAACAGATTGATTTGATTGATTTACTAGTGCAGTTGTGGCGTGGCAAGATGACAATCATCATTTCCGTCATTGTGGCTATTGCCCTGGCTATTGGATATTTGGCAGTAGCGAAGGAGAAATGGACGTCAACAGCAATTATCACTCAGCCCGACGTGGGGCAAATTGCTGGCTATAACAATGCCATGAATGTTATCTATGGTCAGGCTGCACCGAAAGTATCGGATTTGCAGGAGACGTTAATTGGTCGCTTCAGTTCTGCCTTCTCTGCATTAGCAGAAACGCTGGATAATCAGGAAGAACGAGAAAAACTTACCATCGAACCTTCTGTTAAGAACCAGCAATTACCATTGACTGTTTCTTATGTTGGGCAAACTGCAGAGGGCGCACAAATGAAGTTGGCCCAATACATTCAGCAAGTTGACGATAAAGTGAATCAAGAGCTAGAAAAGGATCTCAAAGACAACATTGCTCTGGGACGGAAAAACTTGCAGGACTCTTTAAGAACGCAGGAAGTAGTCGCGCAGGAGCAGAAAGATCTGCGTATCCGTCAGATTCAGGAAGCGTTGCAGTATGCGAATCAGGCGCAGGTGACAAAACCGCAGATTCAACAGACTGGCGAAGATATCACACAAGATACGTTGTTCCTTTTGGGGAGCGAAGCGCTGGAGTCGATGATTAAGCATGAGGCGACCCGTCCGTTGGTGTTCTCGCCAAACTACTATCAGACTCGTCAAAACCTGCTGGATATCGAAAGCTTAAAAGTTGATGATCTTGATATTCATGCTTACCGTTATGTGATGAAACCGATGTTACCTATTCGTCGTGATAGCCCGAAAAAGGCAATTACCTTGATTCTGGCGGTGCTGCTGGGTGGCATGGTTGGCGCGGGGATTGTGCTGGGGCGTAATGCTCTACGCAATTACAACGCGAAGTAA", + "dna_sequence_length": 981, + "functions": [ + "regulator of length of O-antigen component of lipopolysaccharide chains" + ], + "id": "CDS_2012", + "location": [ + [ + "NC_000913", + 2098301, + "-", + 981 + ] + ], + "md5": "6e61979397fd2d7fe319c75f2f0e2b99", + "parent_gene": "", + "protein_md5": "0759fc5db2198086ff19c48c621e232c", + "protein_translation": "MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAETLDNQEEREKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQQTGEDITQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIESLKVDDLDIHAYRYVMKPMLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006734" + ], + [ + "gene_synonym", + "ECK2023" + ], + [ + "gene_synonym", + "EcoGene:EG13407" + ], + [ + "gene_synonym", + "GI:16129969" + ], + [ + "gene_synonym", + "GeneID:946571" + ], + [ + "gene_synonym", + "JW2010" + ], + [ + "gene_synonym", + "NP_416532.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76373" + ], + [ + "gene_synonym", + "b2028" + ], + [ + "gene_synonym", + "pagA" + ], + [ + "gene_synonym", + "pmrE" + ], + [ + "gene_synonym", + "udg" + ], + [ + "gene_synonym", + "ugd" + ], + [ + "gene_synonym", + "yefA" + ] + ], + "dna_sequence": "ATGAAAATCACCATTTCCGGTACTGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGCATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTTTGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCCACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGATAAATCCTTATGCGGTTATGGTCATCAAATCAACGGTTCCCGTTGGTTTTACCGCAGCGATGCATAAGAAATATCGCACTGAAAATATTATATTCTCCCCGGAATTTCTCCGTGAGGGTAAAGCCCTTTACGATAATCTCCATCCTTCACGTATTGTCATCGGTGAGCGTTCAGAACGCGCAGAACGTTTCGCTGCTCTGTTACAGGAAGGCGCGATTAAGCAAAATATCCCGATGCTGTTTACCGACTCCACTGAAGCAGAAGCGATTAAACTTTTTGCAAACACCTACCTGGCGATGCGCGTGGCGTACTTTAACGAACTGGATAGCTATGCAGAAAGTTTAGGTCTGAATTCCCGTCAAATAATCGAAGGCGTTTGTCTCGACCCACGTATTGGCAACCATTACAACAATCCGTCGTTTGGTTATGGTGGTTATTGTCTGCCGAAAGATACCAAGCAGTTACTGGCGAACTACCAGTCTGTGCCGAATAACCTGATCTCGGCAATTGTCGATGCTAACCGCACGCGTAAAGATTTTATTGCCGATGCCATTTTGTCACGCAAGCCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGTTCAGATAACTTCCGTGCGTCTTCTATTCAGGGGATTATGAAACGTATCAAGGCGAAAGGTGTTGAAGTGATCATCTACGAGCCAGTGATGAAAGAAGACTCATTCTTCAACTCTCGCCTGGAACGTGATCTCGCCACCTTCAAACAACAAGCCGACGTCATTATCTCTAACCGAATGGCAGAAGAGCTTAAGGATGTGGCAGATAAGGTATACACCCGCGATCTCTTTGGCAGCGACTAA", + "dna_sequence_length": 1167, + "functions": [ + "UDP-glucose 6-dehydrogenase" + ], + "id": "CDS_2013", + "location": [ + [ + "NC_000913", + 2099613, + "-", + 1167 + ] + ], + "md5": "72ae5a2e34ca79348cec85ae10c2e7e2", + "parent_gene": "", + "protein_md5": "331e5945e46cb745b85deee985aa748f", + "protein_translation": "MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVIGERSERAERFAALLQEGAIKQNIPMLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006737" + ], + [ + "gene_synonym", + "ECK2024" + ], + [ + "gene_synonym", + "EcoGene:EG10411" + ], + [ + "gene_synonym", + "GI:16129970" + ], + [ + "gene_synonym", + "GeneID:946554" + ], + [ + "gene_synonym", + "JW2011" + ], + [ + "gene_synonym", + "NP_416533.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00350" + ], + [ + "gene_synonym", + "b2029" + ], + [ + "gene_synonym", + "gnd" + ] + ], + "dna_sequence": "ATGTCCAAGCAACAGATCGGCGTAGTCGGTATGGCAGTGATGGGACGCAACCTTGCGCTCAACATCGAAAGCCGTGGTTATACCGTCTCTATTTTCAACCGTTCCCGTGAGAAGACGGAAGAAGTGATTGCCGAAAATCCAGGCAAGAAACTGGTTCCTTACTATACGGTGAAAGAGTTTGTCGAATCTCTGGAAACGCCTCGTCGCATCCTGTTAATGGTGAAAGCAGGTGCAGGCACGGATGCTGCTATTGATTCCCTCAAACCATATCTCGATAAAGGAGACATCATCATTGATGGTGGTAACACCTTCTTCCAGGACACTATTCGTCGTAATCGTGAGCTTTCAGCAGAGGGCTTTAACTTCATCGGTACCGGTGTTTCTGGCGGTGAAGAGGGGGCGCTGAAAGGTCCTTCTATTATGCCTGGTGGCCAGAAAGAAGCCTATGAATTGGTAGCACCGATCCTGACCAAAATCGCCGCCGTAGCTGAAGACGGTGAACCATGCGTTACCTATATTGGTGCCGATGGCGCAGGTCACTATGTGAAGATGGTTCACAACGGTATTGAATACGGCGATATGCAGCTGATTGCTGAAGCCTATTCTCTGCTTAAAGGTGGCCTGAACCTCACCAACGAAGAACTGGCGCAGACCTTTACCGAGTGGAATAACGGTGAACTGAGCAGTTACCTGATCGACATCACCAAAGATATCTTCACCAAAAAAGATGAAGACGGTAACTACCTGGTTGATGTGATCCTGGATGAAGCGGCTAACAAAGGTACCGGTAAATGGACCAGCCAGAGCGCGCTGGATCTCGGCGAACCGCTGTCGCTGATTACCGAGTCTGTGTTTGCACGTTATATCTCTTCTCTGAAAGATCAGCGTGTTGCCGCATCTAAAGTTCTCTCTGGTCCGCAAGCACAGCCAGCAGGCGACAAGGCTGAGTTCATCGAAAAAGTTCGTCGTGCGCTGTATCTGGGCAAAATCGTTTCTTACGCCCAGGGCTTCTCTCAGCTGCGTGCTGCGTCTGAAGAGTACAACTGGGATCTGAACTACGGCGAAATCGCGAAGATTTTCCGTGCTGGCTGCATCATCCGTGCGCAGTTCCTGCAGAAAATCACCGATGCTTATGCCGAAAATCCACAGATCGCTAACCTGTTGCTGGCTCCGTACTTCAAGCAAATTGCCGATGACTACCAGCAGGCGCTGCGTGATGTCGTTGCTTATGCAGTACAGAACGGTATTCCGGTTCCGACCTTCTCCGCAGCGGTTGCCTATTACGACAGCTACCGTGCTGCTGTTCTGCCTGCGAACCTGATCCAGGCACAGCGTGACTATTTTGGTGCGCATACTTATAAGCGTATTGATAAAGAAGGTGTGTTCCATACCGAATGGCTGGATTAA", + "dna_sequence_length": 1407, + "functions": [ + "6-phosphogluconate dehydrogenase, decarboxylating" + ], + "id": "CDS_2014", + "location": [ + [ + "NC_000913", + 2101268, + "-", + 1407 + ] + ], + "md5": "72c6c9f518224e7d5d9d372c83694f26", + "parent_gene": "", + "protein_md5": "1776f92beb74ff0ccd9ac47a65663644", + "protein_translation": "MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD", + "protein_translation_length": 468, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006744" + ], + [ + "gene_synonym", + "ASAP:ABE-0285061" + ], + [ + "gene_synonym", + "ASAP:ABE-0285104" + ], + [ + "gene_synonym", + "ECK2025" + ], + [ + "gene_synonym", + "EcoGene:EG11986" + ], + [ + "gene_synonym", + "GeneID:4056030" + ], + [ + "gene_synonym", + "JW2012" + ], + [ + "gene_synonym", + "JW2016" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36667" + ], + [ + "gene_synonym", + "b4571" + ], + [ + "gene_synonym", + "wbbL" + ], + [ + "gene_synonym", + "yefJ" + ] + ], + "dna_sequence": "ATGGTATATATAATAATCGTTTCCCACGGACATGAAGACTACATCAAAAAATTACTCGAAAATCTTAATGCTGACGATGAGCACTACAAGATTATCGTACGCGACAACAAAGACTCTCTATTATTGAAACAAATATGCCAGCATTATGCAGGCCTGGACTATATTAGTGGAGGTGTATACGGCTTTGGTCATAATAATAATATTGCGGTGGCGTATGTAAAGGAAAAATATAGACCCGCAGATGATGATTACATTTTGTTTTTGAATCCCGATATCATCATGAAGCATGATGATTTGCTGACATATATTAAATATGTCGAAAGTAAGCGTTATGCTTTTAGTACATTATGCCTGTTCCGAGATGAAGCGAAATCTTTACATGATTATTCCGTAAGAAAATTTCCTGTGCTTTCTGATTTTATTGTGTCATTTATGTTAGGGATTAATAAAACAAAAATTCCTAAAGAAAGTATCTATTCTGATACGGTTGTTGATTGGTGCGCAGGATCATTTATGCTGGTACGTTTTTCAGATTTTGTGCGTGTAAATGGCTTCGATCAAGGTTACTTTATGTACTGTGAAGATATTGACCTGTGCTTGAGGCTTAGCCTGGCTGGTGTCAGACTTCATTATGTTCCCGCTTTTCATGCGATACATTATGCTCATCATGACAATCGAAGTTTTTTTTCAAAAGCCTTCAGATGGCACTTAAAAAGTACTTTTAGATATTTAGCCAGAAAACGTATTTTATCAAATCGCAACTTTGATCGAATTTCATCAGTTTTTCACCCGTAA", + "dna_sequence_length": 795, + "id": "CDS_2015", + "location": [ + [ + "NC_000913", + 2103389, + "-", + 446 + ], + [ + "NC_000913", + 2101744, + "-", + 349 + ] + ], + "md5": "212492841f5916a32340269f841e509e", + "parent_gene": "", + "protein_md5": "c2d703039bd79e4fea7248224016e5dc", + "protein_translation": "MVYIIIVSHGHEDYIKKLLENLNADDEHYKIIVRDNKDSLLLKQICQHYAGLDYISGGVYGFGHNNNIAVAYVKEKYRPADDDYILFLNPDIIMKHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYSVRKFPVLSDFIVSFMLGINKTKIPKESIYSDTVVDWCAGSFMLVRFSDFVRVNGFDQGYFMYCEDIDLCLRLSLAGVRLHYVPAFHAIHYAHHDNRSFFSKAFRWHLKSTFRYLARKRILSNRNFDRISSVFHP", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006742" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16129971" + ], + [ + "gene_synonym", + "GeneID:946577" + ], + [ + "gene_synonym", + "NP_416535.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE54" + ], + [ + "gene_synonym", + "b2030" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_2016", + "location": [ + [ + "NC_000913", + 2102911, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006747" + ], + [ + "gene_synonym", + "ECK2026" + ], + [ + "gene_synonym", + "EcoGene:EG11985" + ], + [ + "gene_synonym", + "GI:16129972" + ], + [ + "gene_synonym", + "GeneID:946555" + ], + [ + "gene_synonym", + "JW2017" + ], + [ + "gene_synonym", + "NP_416536.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37751" + ], + [ + "gene_synonym", + "b2032" + ], + [ + "gene_synonym", + "wbbK" + ], + [ + "gene_synonym", + "yefI" + ] + ], + "dna_sequence": "ATGGGAAAAAGCATAGTCGTTGTTTCTGCGGTCAATTTTACCACTGGCGGTCCATTTACCATTTTGAAAAAATTTTTGGCAGCAACTAATAATAAAGAAAATGTCAGTTTTATCGCATTAGTCCATTCTGCTAAAGAGTTAAAAGAAAGTTATCCATGGGTTAAATTCATTGAGTTTCCTGAGGTTAAAGGGTCGTGGCTAAAACGTTTGCACTTTGAATATGTAGTTTGTAAAAAACTTTCAAAAGAGCTGAATGCTACGCATTGGATTTGTCTGCATGATATTACGGCCAATGTCGTCACTAAAAAAAGATATGTGTATTGTCATAACCCTGCACCTTTTTATAAAGGAATTTTATTCCGTGAAATTCTTATGGAGCCTAGCTTTTTCTTATTTAAAATGCTATACGGGCTGATATATAAAATAAACATTAAAAAAAATACTGCAGTGTTTGTTCAACAATTCTGGATGAAAGAAAAATTTATCAAGAAATATTCTATAAATAACATCATTGTCAGTCGGCCAGAAATTAAATTATCTGATAAAAGCCAACTTACTGATGATGATTCTCAATTTAAGAATAACCCTTCTGAGTTGACAATATTTTACCCTGCTGTTCCACGAGTATTTAAAAATTACGAGCTTATTATTAGTGCAGCAAGGAAATTGAAAGAACAATCCAATATTAAATTTCTGCTTACTATCAGTGGTACAGAAAATGCGTATGCAAAATATATTATCAGTCTTGCAGAAGGACTGGATAATGTTCATTTCCTCGGGTACTTGGATAAAGAAAAAATCGATCATTGTTATAATATTTCAGATATAGTTTGTTTTCCCTCTAGGTTAGAAACATGGGGATTGCCGTTGTCTGAAGCTAAAGAGCGAGGTAAGTGGGTATTAGCATCAGATTTCCCATTTACTAGAGAAACTCTTGGTAGTTATGAAAAGAAAGCTTTTTTTGATTCTAATAACGATGACATGTTAGTTAAACTTATTATTGACTTCAAAAAAGGTAACCTCAAAAAAGATATCTCTGATGCAAATTTCATTTATCGTAATGAAAATGTATTAGTTGGGTTTGATGAACTAGTTAATTTTATTACTGAAGAACATTGA", + "dna_sequence_length": 1119, + "functions": [ + "lipopolysaccharide biosynthesis protein" + ], + "id": "CDS_2017", + "location": [ + [ + "NC_000913", + 2104509, + "-", + 1119 + ] + ], + "md5": "3082bda545ea69b04de526df8470d2cb", + "parent_gene": "", + "protein_md5": "2510d5f4c945710cbff81f7bd48e9e41", + "protein_translation": "MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006749" + ], + [ + "gene_synonym", + "ECK2027" + ], + [ + "gene_synonym", + "EcoGene:EG11984" + ], + [ + "gene_synonym", + "GI:16129973" + ], + [ + "gene_synonym", + "GeneID:946556" + ], + [ + "gene_synonym", + "JW2018" + ], + [ + "gene_synonym", + "NP_416537.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37750" + ], + [ + "gene_synonym", + "b2033" + ], + [ + "gene_synonym", + "wbbJ" + ], + [ + "gene_synonym", + "yefH" + ] + ], + "dna_sequence": "ATGATCTTAAAACTCGCTAAACGATATGGTCTCTGTGGTTTTATTCGGCTTGTTAGAGATGTCTTATTGACTCGTGTATTTTACCGGAACTGTAGAATTATTCGATTTCCCTGCTATATTCGCAATGATGGTAGCATTAATTTTGGTGAAAATTTCACAAGTGGAGTCGGTCTCAGGCTGGATGCATTTGGACGTGGCGTGATTTTTTTTTCCGATAATGTGCAAGTTAACGACTATGTTCATATCGCCTCAATTGAGAGCGTTACGATAGGTCGGGATACGCTTATTGCAAGTAAAGTATTTATTACCGATCATAATCACGGTTCCTTTAAGCACTCTGATCCAATGAGTTCGCCAAATATACCTCCAGACATGCGCACGTTGGAATCTTCAGCTGTTGTAATTGGCCAGAGGGTTTGGTTGGGTGAGAATGTGACGGTTTTGCCTGGAACAATTATTGGTAATGGAGTCGTAGTCGGCGCCAATTCTGTTGTTAGAGGTTCTATTCCCGAAAATACTGTCATTGCGGGAGTACCAGCAAAAATCATAAAGAAATACAATCATGAGACCAAATTATGGGAAAAAGCATAG", + "dna_sequence_length": 591, + "functions": [ + "putative lipopolysaccharide biosynthesis O-acetyl transferase" + ], + "id": "CDS_2018", + "location": [ + [ + "NC_000913", + 2105084, + "-", + 591 + ] + ], + "md5": "5036b511c98127ddb9deb69576a6faa4", + "parent_gene": "", + "protein_md5": "a3cf80b1a96f40737bdf834c2afbe003", + "protein_translation": "MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006751" + ], + [ + "gene_synonym", + "ECK2028" + ], + [ + "gene_synonym", + "EcoGene:EG11983" + ], + [ + "gene_synonym", + "GI:16129974" + ], + [ + "gene_synonym", + "GeneID:947041" + ], + [ + "gene_synonym", + "JW2019" + ], + [ + "gene_synonym", + "NP_416538.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37749" + ], + [ + "gene_synonym", + "b2034" + ], + [ + "gene_synonym", + "wbbI" + ], + [ + "gene_synonym", + "yefG" + ] + ], + "dna_sequence": "ATGTATTTTTTGAATGATTTAAATTTCTCTAGACGCGATGCTGGATTTAAAGCAAGAAAAGATGCACTGGACATTGCTTCAGATTATGAAAACATTTCTGTTGTTAACATTCCTCTATGGGGTGGAGTAGTCCAGAGAATTATTAGTTCTGTTAAGCTTAGTACATTTCTCTGCGGTCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGGCCAAACCATTTTGGCATATATTGTCATTCTTTCACCGCCTTCTAAAATTTAGAATAGTACCTCTGATTCATGATATTGATGAATTAAGAGGAGGAGGGGGTAGTGATTCTGTGCGGCTTGCTACCTGTGATATGGTCATAAGTCACAATCCACAAATGACAAAGTACCTTAGTAAATATATGTCTCAGGATAAAATCAAAGACATAAAAATATTTGATTACCTCGTCTCATCTGATGTGGAGCATCGAGATGTTACGGATAAGCAACGAGGGGTCATATATGCTGGCAACCTTTCTAGGCATAAATGTTCTTTCATATATACTGAAGGATGCGATTTTACTCTCTTTGGTGTCAACTATGAAAATAAAGATAATCCTAAATATCTTGGAAGTTTTGATGCTCAATCTCCGGAAAAGATTAACCTCCCAGGCATGCAATTTGGACTCATTTGGGATGGAGATTCTGTCGAAACCTGTAGTGGTGCCTTTGGCGACTATTTAAAGTTTAATAACCCTCATAAGACATCTCTTTATCTTTCAATGGAACTTCCAGTATTTATATGGGATAAAGCCGCCCTTGCGGATTTCATTGTAGATAATAGAATAGGATATGCAGTGGGATCAATCAAAGAAATGCAAGAGATTGTTGACTCCATGACAATAGAAACTTATAAGCAAATTAGTGAGAATACAAAAATTATTTCTCAGAAAATTCGAACAGGAAGTTACTTCAGGGATGTTCTTGAAGAGGTGATCGATGATCTTAAAACTCGCTAA", + "dna_sequence_length": 993, + "functions": [ + "d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase" + ], + "id": "CDS_2019", + "location": [ + [ + "NC_000913", + 2106057, + "-", + 993 + ] + ], + "md5": "b9eb0e063a896d6c7066778c0a373c3b", + "parent_gene": "", + "protein_md5": "a7856af340583419477f2ba362e07f5d", + "protein_translation": "MYFLNDLNFSRRDAGFKARKDALDIASDYENISVVNIPLWGGVVQRIISSVKLSTFLCGLENKDVLIFNFPMAKPFWHILSFFHRLLKFRIVPLIHDIDELRGGGGSDSVRLATCDMVISHNPQMTKYLSKYMSQDKIKDIKIFDYLVSSDVEHRDVTDKQRGVIYAGNLSRHKCSFIYTEGCDFTLFGVNYENKDNPKYLGSFDAQSPEKINLPGMQFGLIWDGDSVETCSGAFGDYLKFNNPHKTSLYLSMELPVFIWDKAALADFIVDNRIGYAVGSIKEMQEIVDSMTIETYKQISENTKIISQKIRTGSYFRDVLEEVIDDLKTR", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006753" + ], + [ + "gene_synonym", + "ECK2029" + ], + [ + "gene_synonym", + "EcoGene:EG11982" + ], + [ + "gene_synonym", + "GI:16129975" + ], + [ + "gene_synonym", + "GeneID:945179" + ], + [ + "gene_synonym", + "JW2020" + ], + [ + "gene_synonym", + "NP_416539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37748" + ], + [ + "gene_synonym", + "b2035" + ], + [ + "gene_synonym", + "rfc" + ], + [ + "gene_synonym", + "wbbH" + ], + [ + "gene_synonym", + "yefF" + ] + ], + "dna_sequence": "ATGATCTATCTTGTAATTAGTGTCTTTCTCATTACAGCATTTATCTGTTTATATCTTAAGAAGGATATATTTTATCCAGCCGTATGCGTTAATATCATCTTCGCACTGGTCTTATTGGGATATGAAATAACGTCAGATATATATGCTTTTCAGTTAAATGACGCTACGTTGATTTTTCTACTTTGCAATGTTTTGACATTTACCCTGTCATGTTTATTGACGGAAAGTGTATTAGATCTAAATATCAGAAAAGTCAATAATGCTATTTATAGCATACCATCGAAGAAAGTGCATAATGTAGGCTTGTTAGTTATTTCTTTTTCGATGATATATATATGCATGAGGTTAAGTAACTACCAGTTCGGGACTAGCTTACTTAGCTATATGAATTTGATAAGAGATGCTGATGTTGAAGACACATCAAGAAATTTCTCAGCATACATGCAGCCAATCATTCTAACTACTTTTGCTTTATTTATTTGGTCTAAAAAATTTACTAATACAAAGGTAAGTAAAACATTTACTTTACTTGTTTTTATTGTATTCATCTTTGCAATTATACTGAATACTGGTAAGCAAATTGTCTTTATGGTTATCATCTCTTATGCATTCATCGTAGGTGTTAATAGAGTAAAACATTATGTTTATCTTATTACAGCTGTAGGTGTTCTATTCTCCTTGTATATGCTCTTTTTACGTGGACTGCCTGGGGGGATGGCATATTATCTATCCATGTATTTGGTCAGCCCTATAATCGCGTTTCAGGAGTTTTATTTTCAGCAAGTATCTAACTCTGCCAGTTCTCATGTCTTTTGGTTTTTTGAAAGGCTGATGGGGCTATTAACAGGTGGAGTCTCTATGTCGTTGCATAAAGAATTTGTGTGGGTGGGTTTGCCAACAAATGTTTATACTGCTTTTTCGGATTATGTTTATATTTCCGCGGAGCTAAGCTATTTGATGATGGTTATTCATGGCTGTATTTCAGGTGTTTTATGGAGATTGTCTCGAAATTACATATCTGTGAAAATATTTTATTCATATTTTATTTATACCTTTTCTTTCATTTTTTATCATGAAAGCTTCATGACTAATATTAGCAGTTGGATACAAATAACTCTTTGTATCATAGTATTCTCTCAATTTCTTAAGGCCCAGAAAATAAAGTGA", + "dna_sequence_length": 1167, + "functions": [ + "O-antigen polymerase" + ], + "id": "CDS_2020", + "location": [ + [ + "NC_000913", + 2107226, + "-", + 1167 + ] + ], + "md5": "29d37f95488310d4b03a3201024204b3", + "parent_gene": "", + "protein_md5": "5d905ecaedc3a9a9204f02b91be48fcf", + "protein_translation": "MIYLVISVFLITAFICLYLKKDIFYPAVCVNIIFALVLLGYEITSDIYAFQLNDATLIFLLCNVLTFTLSCLLTESVLDLNIRKVNNAIYSIPSKKVHNVGLLVISFSMIYICMRLSNYQFGTSLLSYMNLIRDADVEDTSRNFSAYMQPIILTTFALFIWSKKFTNTKVSKTFTLLVFIVFIFAIILNTGKQIVFMVIISYAFIVGVNRVKHYVYLITAVGVLFSLYMLFLRGLPGGMAYYLSMYLVSPIIAFQEFYFQQVSNSASSHVFWFFERLMGLLTGGVSMSLHKEFVWVGLPTNVYTAFSDYVYISAELSYLMMVIHGCISGVLWRLSRNYISVKIFYSYFIYTFSFIFYHESFMTNISSWIQITLCIIVFSQFLKAQKIK", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006755" + ], + [ + "gene_synonym", + "ECK2030" + ], + [ + "gene_synonym", + "EcoGene:EG11981" + ], + [ + "gene_synonym", + "GI:16129976" + ], + [ + "gene_synonym", + "GeneID:945235" + ], + [ + "gene_synonym", + "JW2021" + ], + [ + "gene_synonym", + "NP_416540.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37747" + ], + [ + "gene_synonym", + "b2036" + ], + [ + "gene_synonym", + "glf" + ], + [ + "gene_synonym", + "yefE" + ] + ], + "dna_sequence": "ATGTACGATTATATCATTGTTGGTTCTGGTTTGTTTGGTGCCGTTTGTGCGAATGAGTTAAAAAAGCTAAACAAAAAAGTTTTAGTGATTGAGAAAAGAAATCATATCGGTGGAAATGCGTACACAGAGGACTGTGAGGGTATCCAGATTCATAAATATGGTGCACATATTTTTCATACCAATGATAAATATATATGGGATTACGTTAATGATTTAGTAGAATTTAATCGTTTTACTAATTCTCCACTGGCGATTTATAAAGACAAATTATTCAACCTTCCTTTTAATATGAATACTTTCCACCAAATGTGGGGAGTTAAAGATCCTCAAGAAGCTCAAAATATCATTAATGCTCAGAAAAAAAAGTATGGTGACAAGGTACCTGAAAATTTGGAGGAGCAGGCGATTTCATTAGTTGGGGAGGACTTATACCAAGCATTGATAAAGGGTTATACGGAGAAGCAGTGGGGAAGAAGTGCAAAAGAATTGCCTGCATTTATTATTAAGCGAATCCCAGTGAGATTTACGTTTGATAACAATTATTTTTCCGATCGCTATCAAGGTATTCCGGTGGGAGGCTACACTAAGCTTATTGAAAAAATGCTTGAAGGTGTGGACGTAAAATTAGGCATTGATTTTTTGAAAGACAAAGATTCTCTAGCGAGTAAAGCCCATAGAATCATCTACACTGGACCCATTGATCAGTACTTCGACTATAGGTTTGGAGCGTTAGAATATCGCTCTTTAAAATTTGAGACGGAACGCCATGAATTTCCAAACTTCCAAGGGAATGCAGTAATAAATTTCACTGATGCTAATGTACCATATACCAGAATAATTGAGCATAAACATTTTGACTATGTTGAGACAAAGCATACGGTTGTTACAAAAGAATATCCATTAGAGTGGAAAGTTGGCGACGAACCCTACTATCCAGTTAATGATAATAAAAACATGGAGCTTTTTAAGAAATATAGAGAGTTAGCTAGCAGAGAAGACAAGGTTATATTTGGCGGGCGTTTGGCCGAGTATAAATATTATGATATGCATCAAGTGATATCTGCCGCTCTTTATCAAGTGAAAAATATAATGAGTACGGATTAA", + "dna_sequence_length": 1104, + "functions": [ + "UDP-galactopyranose mutase, FAD/NAD(P)-binding" + ], + "id": "CDS_2021", + "location": [ + [ + "NC_000913", + 2108329, + "-", + 1104 + ] + ], + "md5": "0db2970403d276a5233d54cb9d15bcf8", + "parent_gene": "", + "protein_md5": "fc22b4972a0a69ca115b8037852bb5a9", + "protein_translation": "MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKDSLASKAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEFPNFQGNAVINFTDANVPYTRIIEHKHFDYVETKHTVVTKEYPLEWKVGDEPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYKYYDMHQVISAALYQVKNIMSTD", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006757" + ], + [ + "gene_synonym", + "ECK2031" + ], + [ + "gene_synonym", + "EcoGene:EG11980" + ], + [ + "gene_synonym", + "GI:16129977" + ], + [ + "gene_synonym", + "GeneID:946557" + ], + [ + "gene_synonym", + "JW2022" + ], + [ + "gene_synonym", + "NP_416541.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37746" + ], + [ + "gene_synonym", + "b2037" + ], + [ + "gene_synonym", + "rfbX" + ], + [ + "gene_synonym", + "wzx" + ], + [ + "gene_synonym", + "wzxB" + ] + ], + "dna_sequence": "ATGAATACGAATAAATTATCTTTAAGAAGAAACGTTATATATCTGGCTGTCGTTCAAGGTAGCAATTATCTTTTACCATTGCTTACATTTCCATATCTTGTAAGAACACTTGGTCCTGAAAATTTCGGTATATTCGGTTTTTGCCAAGCGACTATGCTATATATGATAATGTTTGTTGAATATGGTTTCAATCTCACAGCAACTCAGAGTATTGCCAAAGCAGCAGATAGTAAAGATAAAGTAACGTCTATTTTTTGGGCGGTGATATTTTCAAAAATAGTTCTTATCGTCATTACATTGATTTTCTTAACGTCGATGACCTTGCTTGTTCCTGAATATAACAAGCATGCCGTAATTATATGGTCGTTTGTTCCTGCATTAGTCGGGAATTTAATCTACCCTATCTGGCTGTTTCAGGGAAAAGAAAAAATGAAATGGCTGACTTTAAGTAGTATTTTATCCCGCTTGGCTATTATCCCTCTAACATTTATTTTTGTGAACACAAAGTCAGATATAGCAATTGCCGGTTTTATTCAGTCAAGTGCAAATCTGGTTGCTGGAATTATTGCACTAGCTATCGTTGTTCATGAAGGTTGGATTGGTAAAGTTACGCTATCATTACATAATGTGCGTCGATCTTTAGCAGACGGTTTTCATGTTTTTATTTCCACATCTGCTATTAGTTTATATTCTACGGGAATAGTTATTATCCTGGGATTTATATCTGGACCAACGTCCGTAGGGAATTTTAATGCGGCCAATACTATAAGAAACGCGCTTCAAGGGCTATTAAATCCTATCACCCAAGCAATATACCCAAGAATATCAAGTACGCTTGTTCTTAATCGTGTGAAGGGTGTGATTTTAATTAAAAAATCATTGACCTGCTTGAGTTTGATTGGTGGTGCTTTTTCATTAATTCTGCTCTTGGGTGCATCTATACTAGTAAAAATAAGTATAGGGCCGGGATATGATAATGCAGTGATTGTGCTAATGATTATATCGCCTCTGCCTTTTCTTATTTCATTAAGTAATGTCTATGGCATTCAAGTTATGCTGACCCATAATTATAAGAAAGAATTCAGTAAGATTTTAATCGCTGCGGGTTTGTTGAGTTTGTTGTTGATTTTTCCGCTAACAACTCTTTTTAAAGAGATTGGTGCAGCAATAACATTGCTTGCAACAGAGTGCTTAGTTACGTCACTCATGCTGATGTTCGTAAGAAATAATAAATTACTGGTTTGCTGA", + "dna_sequence_length": 1248, + "functions": [ + "putative polisoprenol-linked O-antigen transporter" + ], + "id": "CDS_2022", + "location": [ + [ + "NC_000913", + 2109584, + "-", + 1248 + ] + ], + "md5": "7347e189fd3302a6259522ad99e3b765", + "parent_gene": "", + "protein_md5": "78a7a798f8564db9cf1252961b3f57fd", + "protein_translation": "MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006759" + ], + [ + "gene_synonym", + "ECK2032" + ], + [ + "gene_synonym", + "EcoGene:EG11979" + ], + [ + "gene_synonym", + "GI:16129978" + ], + [ + "gene_synonym", + "GeneID:947482" + ], + [ + "gene_synonym", + "JW2023" + ], + [ + "gene_synonym", + "NP_416542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37745" + ], + [ + "gene_synonym", + "b2038" + ], + [ + "gene_synonym", + "rfbC" + ], + [ + "gene_synonym", + "rfbD" + ], + [ + "gene_synonym", + "rmlC" + ] + ], + "dna_sequence": "ATGAATGTGATTAGAACTGAAATTGAAGATGTGCTAATTCTGGAGCCAAGAGTATTTGGTGATGATAGAGGTTTCTTTTATGAGAGCTTTAATCAATCAGCATTTGAACATATTCTAGGCTATCCGGTCAGCTTTGTTCAAGACAATCACTCACGTTCATCAAAAAATGTACTCAGAGGCCTTCACTTTCAACGCGGCGAGTACGCACAAGATAAACTTGTACGCTGCACTCATGGAGCAGTTTTTGATGTTGCTGTTGATATTCGACCCAATTCGGTATCCTTTGGTAAATGGGTTGGTGTTCTGCTTTCAGCTGATAATAAGCAGCAGTTGTGGATACCAAAAGGGTTTGCTCATGGCTTTTTGGTTCTGTCTGATATCGCTGAATTTCAATATAAAACTACAAACTATTATCATCCTGAAAGCGATTGTGGAATATGTTGGAATGATGAACGCATTGCAATTGATTGGCCCCAAACATCAGGGTTAATCCTTTCGCCAAAAGATGAAAGGCTCTTTACGTTAGATGAGCTTATCAGATTAAAATTAATTGCATGA", + "dna_sequence_length": 558, + "functions": [ + "dTDP-4-deoxyrhamnose-3,5-epimerase" + ], + "id": "CDS_2023", + "location": [ + [ + "NC_000913", + 2110138, + "-", + 558 + ] + ], + "md5": "5c6f5c1b1745c578189a173a3b07c4e2", + "parent_gene": "", + "protein_md5": "9bf85933bdf484f6262ba039af857a65", + "protein_translation": "MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQTSGLILSPKDERLFTLDELIRLKLIA", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006762" + ], + [ + "gene_synonym", + "ECK2033" + ], + [ + "gene_synonym", + "EcoGene:EG11978" + ], + [ + "gene_synonym", + "GI:16129979" + ], + [ + "gene_synonym", + "GeneID:945154" + ], + [ + "gene_synonym", + "JW2024" + ], + [ + "gene_synonym", + "NP_416543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37744" + ], + [ + "gene_synonym", + "b2039" + ], + [ + "gene_synonym", + "rfbA" + ], + [ + "gene_synonym", + "rmlA" + ], + [ + "gene_synonym", + "som" + ] + ], + "dna_sequence": "ATGAAAATGCGTAAAGGTATTATTTTAGCGGGTGGTTCTGGTACACGTCTTTATCCTGTGACTATGGCTGTCAGTAAACAGCTATTACCTATTTATGATAAACCGATGATCTATTACCCGCTCTCTACACTGATGTTGGCGGGTATTCGCGATATTTTGATTATCAGTACACCTCAGGATACTCCTCGTTTTCAACAATTGCTGGGTGACGGTAGCCAGTGGGGCCTGAATCTTCAGTACAAAGTGCAACCTAGCCCAGATGGCCTCGCGCAGGCATTTATCATCGGTGAAGAGTTTATTGGTGGTGATGATTGTGCTTTGGTTCTTGGTGATAATATCTTTTACGGTCACGATCTGCCGAAGCTAATGGAGGCCGCTGTTAACAAAGAAAGTGGTGCAACGGTATTTGCCTATCACGTTAATGATCCAGAACGCTATGGTGTCGTTGAGTTTGATAAAAACGGTACGGCAATCAGTCTGGAAGAAAAACCGTTAGAACCAAAGAGTAATTACGCCGTTACAGGTCTGTACTTTTATGATAACGACGTGGTTCAGATGGCGAAAAACTTGAAGCCGTCTGCACGTGGTGAGTTAGAAATTACAGATATTAACCGTATTTATCTTGAGCAGGGACGTCTGTCTGTCGCGATGATGGGGCGTGGCTACGCGTGGCTGGACACGGGGACTCATCAGAGTCTGATAGAAGCAAGTAATTTTATTGCGACAATTGAAGAGCGCCAGGGATTGAAGGTTTCCTGTCCTGAAGAGATTGCATTTCGTAAAGGTTTTATTGATGTTGAGCAAGTAAGAAAATTAGCTGTACCACTAATAAAGAATAATTATGGGCAGTATCTTTATAAAATGACGAAGGATTCAAATTAA", + "dna_sequence_length": 882, + "functions": [ + "glucose-1-phosphate thymidylyltransferase" + ], + "id": "CDS_2024", + "location": [ + [ + "NC_000913", + 2111019, + "-", + 882 + ] + ], + "md5": "3c5263cc22009577a279292ecf0f099f", + "parent_gene": "", + "protein_md5": "124980151a79fe5390609902d6bab740", + "protein_translation": "MKMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKDSN", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006764" + ], + [ + "gene_synonym", + "ECK2034" + ], + [ + "gene_synonym", + "EcoGene:EG12411" + ], + [ + "gene_synonym", + "GI:16129980" + ], + [ + "gene_synonym", + "GeneID:947117" + ], + [ + "gene_synonym", + "JW2025" + ], + [ + "gene_synonym", + "NP_416544.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37760" + ], + [ + "gene_synonym", + "b2040" + ], + [ + "gene_synonym", + "rfbD" + ], + [ + "gene_synonym", + "rmlD" + ] + ], + "dna_sequence": "ATGAATATCCTCCTTTTTGGCAAAACAGGGCAGGTAGGTTGGGAACTACAGCGTGCTCTGGCACCTTTGGGTAATTTGATTGCTTTTGATGTTCACTCTACTGATTATTGCGGTGATTTTAGTAATCCTGAAGGTGTAGCTGAAACCGTAAGAAGCATTCGGCCGGATATTATTGTCAATGCAGCCGCTCACACCGCAGTAGACAAAGCAGAATCAGAACCGGAGTTTGCACAATTAATTAACGCAACAAGTGTCGAAGCGATTGCGAAAGCAGCAAATGAAGTTGGAGCCTGGGTTATCCATTACTCGACTGATTACGTCTTCCCTGGAAATGGCGATATGCCATGGCTGGAGACGGATGCAACCGCACCACTAAATGTTTACGGTGAAACCAAGTTAGCCGGAGAAAAAGCGTTACAGGAATATTGCGCGAAGCATCTTATTTTCCGGACCAGCTGGGTCTATGCAGGAAAAGGAAATAACTTCGCCAAAACGATGTTACGTCTGGCAAAAGAGCGTGAAGAATTAGCGGTTATTAACGATCAGTTTGGTGCGCCAACAGGTGCTGAACTGCTGGCTGATTGTACAGCACATGCCATTCGTGTCGCACTGAATAAACCGGATGTCGCAGGCTTGTACCATTTGGTAGCCAGTGGTACCACAACCTGGTACGATTATGCTGCGCTGGTTTTTGAAGAGGCGCGCAAAGCAGGCATTCCCCTTGCACTCAACAAGCTCAACGCAGTACCAACAACAGCCTATCCTACACCAGCTCGTCGTCCACATAACTCTCGCCTTAATACAGAAAAATTTCAGCAGAACTTTGCGCTTGTCTTGCCTGACTGGCAGGTTGGCGTGAAACGAATGCTCAATGAATTATTTACGACTACAGCAATTTAA", + "dna_sequence_length": 900, + "functions": [ + "dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit" + ], + "id": "CDS_2025", + "location": [ + [ + "NC_000913", + 2111976, + "-", + 900 + ] + ], + "md5": "2aa00a8285f1043789628e576ebb8721", + "parent_gene": "", + "protein_md5": "f1778da0779cf0a6e7618d0f864a75d5", + "protein_translation": "MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTTTWYDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNELFTTTAI", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006766" + ], + [ + "gene_synonym", + "ECK2035" + ], + [ + "gene_synonym", + "EcoGene:EG12412" + ], + [ + "gene_synonym", + "GI:16129981" + ], + [ + "gene_synonym", + "GeneID:945276" + ], + [ + "gene_synonym", + "JW2026" + ], + [ + "gene_synonym", + "NP_416545.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37759" + ], + [ + "gene_synonym", + "b2041" + ], + [ + "gene_synonym", + "rfbB" + ], + [ + "gene_synonym", + "rmlB" + ], + [ + "gene_synonym", + "som" + ] + ], + "dna_sequence": "GTGAAAATACTTGTTACTGGTGGCGCAGGATTTATTGGTTCAGCTGTAGTTCGTCACATTATAAATAATACGCAGGATAGTGTTGTTAATGTCGATAAATTAACGTACGCCGGAAACCGGGAATCACTTGCTGATGTTTCTGATTCTGAACGCTATGTTTTTGAACATGCGGATATTTGCGATGCACCTGCAATGGCACGGATTTTTGCTCAGCATCAGCCGGATGCAGTGATGCACCTGGCTGCTGAAAGCCATGTTGACCGTTCAATTACAGGCCCTGCGGCATTTATTGAAACCAATATTGTTGGTACTTATGTCCTTTTGGAAGCCGCTCGCAATTACTGGTCTGCTCTTGATAGCGACAAGAAAAATAGCTTCCGTTTTCATCATATTTCTACTGACGAAGTCTATGGTGATTTGCCTCATCCAGATGAAGTAAATAATACAGAAGAATTACCCTTATTTACTGAGACGACAGCTTACGCGCCAAGCAGCCCTTATTCCGCATCCAAAGCATCCAGCGATCATTTAGTCCGCGCGTGGAAACGTACATATGGTTTACCGACAATTGTGACTAATTGCTCGAACAACTATGGTCCTTATCATTTCCCGGAAAAGCTTATTCCACTGGTTATTCTTAATGCACTGGAAGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTTGAAGATCATGCGCGTGCGTTATATACCGTCGTAACCGAAGGTAAAGCGGGTGAAACTTATAACATTGGTGGGCACAACGAAAAGAAAAACATCGATGTAGTGCTCACTATTTGTGATTTGCTGGATGAGATTGTACCGAAAGAGAAATCTTATCGTGAGCAAATCACTTATGTTGCTGATCGTCCGGGACACGATCGCCGCTATGCTATTGATGCTGAGAAGATTGGTCGCGCATTGGGATGGAAACCACAGGAAACGTTTGAGAGCGGGATTCGTAAAACGGTGGAATGGTACCTGTCCAATACAAAATGGGTTGATAATGTGAAAAGTGGTGCCTATCAATCGTGGATTGAACAGAACTATGAGGGCCGCCAGTAA", + "dna_sequence_length": 1086, + "functions": [ + "dTDP-glucose 4,6 dehydratase, NAD(P)-binding" + ], + "id": "CDS_2026", + "location": [ + [ + "NC_000913", + 2113061, + "-", + 1086 + ] + ], + "md5": "78c04d0de69c33a17dd346d1210ea7a1", + "parent_gene": "", + "protein_md5": "1405208aed5cd6f9b3443b549f31dbc1", + "protein_translation": "MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGAYQSWIEQNYEGRQ", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006771" + ], + [ + "gene_synonym", + "ECK2036" + ], + [ + "gene_synonym", + "EcoGene:EG13578" + ], + [ + "gene_synonym", + "GI:16129982" + ], + [ + "gene_synonym", + "GeneID:946560" + ], + [ + "gene_synonym", + "JW2027" + ], + [ + "gene_synonym", + "NP_416546.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAB6" + ], + [ + "gene_synonym", + "b2042" + ], + [ + "gene_synonym", + "galF" + ], + [ + "gene_synonym", + "wcaN" + ] + ], + "dna_sequence": "ATGACGAATTTAAAAGCAGTTATTCCTGTAGCGGGTCTCGGGATGCATATGTTGCCTGCCACTAAGGCGATACCCAAAGAGATGCTACCAATCGTCGACAAGCCAATGATTCAGTACATTGTTGACGAGATTGTGGCTGCAGGGATCAAAGAAATCCTCCTGGTAACTCACGCGTCCAAGAACGCGGTCGAAAACCACTTCGACACCTCTTATGAGTTAGAATCACTCCTTGAGCAGCGCGTGAAGCGTCAACTGCTGGCGGAAGTACAGTCCATCTGTCCGCCGGGCGTGACCATTATGAACGTGCGTCAGGGCGAACCTTTAGGTTTAGGCCACTCCATTTTGTGTGCGCGACCTGCCATTGGTGACAACCCATTTGTCGTGGTACTGCCAGACGTTGTGATCGACGATGCCAGCGCCGACCCGCTACGTTACAACCTTGCTGCCATGATTGCACGTTTCAACGAAACGGGCCGCAGCCAGGTGCTGGCAAAACGTATGCCGGGTGACCTCTCTGAATACTCCGTCATCCAGACTAAAGAGCCGCTGGACCGTGAGGGTAAAGTCAGCCGCATTGTTGAATTTATCGAAAAACCGGATCAGCCGCAGACGCTGGACTCAGACATCATGGCCGTAGGTCGCTATGTGCTTTCTGCCGATATTTGGCCGGAACTGGAACGTACTCAGCCTGGTGCATGGGGACGTATTCAGCTGACTGATGCTATTGCCGAGCTGGCGAAAAAACAATCCGTTGATGCAATGCTGATGACCGGCGACAGTTACGACTGCGGCAAAAAAATGGGCTATATGCAGGCGTTTGTGAAGTATGGCCTACGCAACCTGAAAGAAGGGGCGAAGTTCCGTAAAGGTATTGAGAAGCTGTTAAGCGAATAA", + "dna_sequence_length": 894, + "functions": [ + "putative regulatory subunit for GalU" + ], + "id": "CDS_2027", + "location": [ + [ + "NC_000913", + 2114327, + "-", + 894 + ] + ], + "md5": "fb623c2aba06743e53f21e3d2bbf12ff", + "parent_gene": "", + "protein_md5": "82b18d472babf79a0c6f7c73093e156d", + "protein_translation": "MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006774" + ], + [ + "gene_synonym", + "ECK2037" + ], + [ + "gene_synonym", + "EcoGene:EG12651" + ], + [ + "gene_synonym", + "GI:16129983" + ], + [ + "gene_synonym", + "GeneID:946561" + ], + [ + "gene_synonym", + "JW2028" + ], + [ + "gene_synonym", + "NP_416547.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71244" + ], + [ + "gene_synonym", + "b2043" + ], + [ + "gene_synonym", + "wcaM" + ], + [ + "gene_synonym", + "yefK" + ] + ], + "dna_sequence": "ATGCCATTTAAAAAACTCTCCCGACGCACGTTCCTGACGGCAAGCTCGGCGCTTGCCTTCCTCCATACCCCTTTCGCCCGCGCGCTTCCCGCCCGACAAAGCGTTAACATTAACGACTACAACCCACACGACTGGATCGCCTCATTTAAACAAGCCTTCAGCGAAGGGCAAACAGTCGTCGTGCCTGCCGGATTGGTTTGTGACAATATCAACACCGGCATCTTTATCCCTCCCGGTAAAACGTTACACATTCTTGGAAGCTTGCGCGGCAACGGCAGAGGGCGATTTGTCTTACAGGACGGCAGCCAGGTGACAGGGGAGGATGGCGGCAGTATGCATAACATCACCCTGGATGTGCGTGGTTCTGACTGCACCATCAAAGGGCTGACTATGAGCGGCTTTGGCCCGGTGACGCAGATTTATATCGGCGGCAAAAACAAACGGGTCATGCGCAACCTGATCATCGATAACCTGACCGTTAGCCACGCTAATTACGCCATCTTACGCCAGGGATTTCATAACCAGATTATCGGTGCCAACATCACCAATTGTAAGTTCAGCGACTTACAAGGCGACGCCATTGAATGGAACGTGGCAATTAACGACCGTGATATTTTGATATCTGACCATGTCATCGAGCGCATCAACTGTACCAACGGCAAAATCAACTGGGGCATCGGCATAGGCCTTGCGGGAAGCACTTATGATAACAACTACCCGGAAGACCAGGCAGTGAAAAACTTTGTCGTGGCGAATATCACGGGATCGGATTGTCGGCAGTTGATACATGTTGAAAATGGTAAACATTTTGTTATTCGTAATATCAAAGCCCGCAATATCACGCCGGATTTCAGTAAGAAAGCGGGCATTGATAACGCGACAGTCGCTATTTACGGTTGTGACAATTTCGTGATTGATAATATTGAAATGATTAATAGCGCCGGGATGTTAATCGGCTATGGGGTAATTAAAGGCAAATATCTCTCGATACCGCAAAATTTCCGGGTGAATGATATTCAACTGGATAATACTCATCTTGCTTATAAATTGCGCGGCATTCAAATCTCCGCCGGGAATGCTGTTTCCTTTGTGGCGCTAACTAACATTGAGATGAAGCGTGCGTCGCTGGAGTTACACAACAAACCGCAACATTTTTTTATGCGAAATATCAATGTGATGCAGGAATCCTCAGTTGGACCCGCATTGAGCATGAACTTTGACATGCGCAAAGACGTTCGTGGTGTTTTTATGGCGAAAAAAGAAACACTGCTGTCTCTTGCAAATGTTCATGCGGTGAATGAAAAAGGACAAAGCTCCGTCGATATCGACAGGATTAATCACCATATTGTTAATGTGGAGAAGATTAACTTTAGATTGCCGGAACTGAGGGAGTAG", + "dna_sequence_length": 1395, + "functions": [ + "colanic acid biosynthesis protein" + ], + "id": "CDS_2028", + "location": [ + [ + "NC_000913", + 2115896, + "-", + 1395 + ] + ], + "md5": "3c9b92c0eb063e6598c24774170edfe0", + "parent_gene": "", + "protein_md5": "3a654fed508b318c2cd93bd23e93f124", + "protein_translation": "MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE", + "protein_translation_length": 464, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006777" + ], + [ + "gene_synonym", + "ECK2038" + ], + [ + "gene_synonym", + "EcoGene:EG12652" + ], + [ + "gene_synonym", + "GI:16129984" + ], + [ + "gene_synonym", + "GeneID:946565" + ], + [ + "gene_synonym", + "JW2029" + ], + [ + "gene_synonym", + "NP_416548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71243" + ], + [ + "gene_synonym", + "b2044" + ], + [ + "gene_synonym", + "wcaL" + ], + [ + "gene_synonym", + "yefL" + ] + ], + "dna_sequence": "ATGAAGGTCGGCTTCTTTTTACTGAAATTCCCGCTGTCGTCAGAAACCTTCGTCCTTAACCAAATTACCGCGTTTATTGATATGGGATTTGAGGTAGAGATTCTCGCGCTGCAAAAAGGCGACACACAAAACACCCACGCGGCATGGACGAAATACAACCTTGCTGCCAGAACCCGCTGGTTACAGGACGAACCTACGGGCAAAGTGGCGAAACTGCGCCACCGAGCCAGCCAGACCTTGCGCGGCATTCATCGTAAAAATACCTGGCAGGCGCTCAACCTCAAACGCTATGGTGCCGAGTCGCGGAACCTGATTTTGTCTGCCATTTGCGGCCAGGTCGCAACACCGTTTCGCGCCGATGTGTTCATCGCTCATTTTGGTCCCGCGGGGGTAACCGCAGCAAAACTCCGCGAACTGGGTGTCATTCGCGGCAAAATTGCCACTATCTTCCACGGTATTGATATCTCCAGTCGGGAAGTGCTCAACCACTACACTCCCGAATATCAGCAACTGTTTCGCCGTGGCGACCTGATGTTACCGATAAGCGATCTGTGGGCCGGAAGGCTGCAAAAAATGGGCTGCCCGAGGGAAAAAATCGCCGTATCGCGCATGGGCGTAGATATGACGCGCTTTAGCCCGCGTCCCGTGAAAGCGCCCGCAACGCCGCTGGAGATTATTTCCGTCGCACGCTTAACCGAGAAAAAAGGCCTGCATGTGGCGATCGAAGCCTGCCGTCAGTTGAAAGAGCAGGGCGTGGCATTTCGCTATCGCATCCTCGGCATTGGCCCGTGGGAAAGACGCCTGCGCACCCTCATCGAACAATATCAACTGGAAGATGTGGTGGAGATGCCGGGCTTTAAACCGAGCCATGAAGTGAAAGCGATGCTCGACGACGCGGATGTCTTCCTGTTGCCATCGGTTACAGGTGCGGATGGTGATATGGAAGGTATTCCGGTGGCGCTAATGGAAGCGATGGCGGTCGGTATTCCGGTGGTTTCTACTCTGCATAGTGGAATACCGGAACTGGTGGAGGCTGACAAATCCGGCTGGCTGGTGCCTGAGAACGATGCTCGCGCACTGGCGCAACGACTGGCGGCGTTTAGCCAACTGGACACCGACGAATTGGCTCCGGTCGTCAAACGCGCGCGCGAAAAAGTTGAACACGATTTTAACCAGCAGGTGATCAATCGAGAACTCGCCAGCTTGCTGCAGGCTTTATAG", + "dna_sequence_length": 1221, + "functions": [ + "putative glycosyl transferase" + ], + "id": "CDS_2029", + "location": [ + [ + "NC_000913", + 2117127, + "-", + 1221 + ] + ], + "md5": "4d208e649a88a779bf0861939768fb7a", + "parent_gene": "", + "protein_md5": "4c6dcdeb48b922405f91072b67dd3ea4", + "protein_translation": "MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEILALQKGDTQNTHAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQQVINRELASLLQAL", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006780" + ], + [ + "gene_synonym", + "ECK2039" + ], + [ + "gene_synonym", + "EcoGene:EG13577" + ], + [ + "gene_synonym", + "GI:16129985" + ], + [ + "gene_synonym", + "GeneID:946569" + ], + [ + "gene_synonym", + "JW2030" + ], + [ + "gene_synonym", + "NP_416549.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71242" + ], + [ + "gene_synonym", + "b2045" + ], + [ + "gene_synonym", + "wcaK" + ] + ], + "dna_sequence": "ATGAAATTACTTATTCTGGGCAACCACACTTGCGGCAATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGCTCAACCGCCCGGTAATGGGCGATCCGCTGTTCCTGCAAATGAAACAACACAACAGCGCGGCGGGCGTTGTCGGGCGCGTTAAAAAAGTCCTCCGTCGCCGCTACCAGCATCAGGTATTGCTCTCACGCGTCACCGACACTGGCAAGCTGCGCAATATCGCCATCGCCCAGGGATTCACCGACTTCGTGCGCCTGCTGTCAGGTTACGACGCCATTATCCAGGTCGGCGGATCGTTTTTTGTCGATCTCTATGGCGTGCCGCAGTTTGAACATGCACTTTGCACGTTTATGGCGAAAAAGCCGCTGTTTATGATTGGTCACAGTGTTGGCCCGTTCCAGGATGAGCAATTTAACCAACTGGCGAACTACGTTTTTGGTCACTGCGACGCGCTGATCCTGCGCGAATCGGTCAGCTTTGATCTGATGAAACGCAGCAATATCACCACCGCAAAAGTGGAACATGGCGTCGATACCGCGTGGCTGGTCGATCACCACACAGAAGACTTCACCGCCAGCTATGCCGTTCAACACTGGCTGGACGTTGCCGCACAACAGAAAACGGTGGCCATTACCCTGCGCGAACTGGCACCGTTTGACAAACGTCTCGGCACCACTCAACAAGCGTATGAAAAAGCCTTTGCCGGGGTGGTCAATCGCATTCTCGATGAAGGGTATCAGGTGATTGCGCTCTCCACCTGTACGGGCATTGACAGCTATAACAAAGACGACCGCATGGTGGCGCTCAACCTGCGCCAGCACATCAGCGATCCTGCCCGTTACCACGTAGTGATGGATGAACTCAACGATCTGGAAATGGGCAAAATTCTGGGGGCCTGTGAACTCACCGTCGGTACGCGCCTGCACTCTGCCATTATCTCGATGAATTTTGCCACTCCGGCAATTGCCATCAACTACGAACATAAATCCGCCGGGATTATGCAGCAGCTGGGACTACCGGAGATGGCAATTGATATCCGTCATTTATTAGACGGCAGCCTGCAAGCGATGGTTGCGGATACCTTAGGCCAGCTTCCGGCGCTGAATGCGCGACTTAGTGAAGCCGTCAGTCGTGAGCGTCAGACAGGAATGCAGATGGTGCAGTCTGTGCTTGAGCGCATCGGGGAGGTGAAATGA", + "dna_sequence_length": 1281, + "functions": [ + "colanic acid biosynthesis protein" + ], + "id": "CDS_2030", + "location": [ + [ + "NC_000913", + 2118404, + "-", + 1281 + ] + ], + "md5": "3528a2cc1c819924c7a1b3be3ad45674", + "parent_gene": "", + "protein_md5": "dac32997412c94e5ed33df32cc019338", + "protein_translation": "MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006783" + ], + [ + "gene_synonym", + "ECK2040" + ], + [ + "gene_synonym", + "EcoGene:EG13576" + ], + [ + "gene_synonym", + "GI:16129986" + ], + [ + "gene_synonym", + "GeneID:946581" + ], + [ + "gene_synonym", + "JW2031" + ], + [ + "gene_synonym", + "NP_416550.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77377" + ], + [ + "gene_synonym", + "b2046" + ], + [ + "gene_synonym", + "wzx" + ], + [ + "gene_synonym", + "wzxC" + ] + ], + "dna_sequence": "ATGAGCTTACGTGAAAAAACCATCAGCGGCGCGAAGTGGTCGGCGATTGCCACGGTGATCATCATCGGCCTCGGGCTGGTGCAGATGACCGTGCTGGCGCGGATTATCGACAACCACCAGTTCGGCCTGCTTACCGTGTCGCTGGTGATTATCGCGCTGGCAGATACGCTTTCTGACTTCGGTATCGCTAACTCGATTATTCAGCGAAAAGAAATCAGTCACCTTGAACTCACCACGTTGTACTGGCTGAACGTCGGGCTGGGGATCGTGGTGTGCGTGGCGGTGTTTTTGTTGAGTGATCTCATCGGCGACGTGCTGAATAACCCGGACCTGGCACCGTTGATTAAAACATTATCGCTGGCGTTTGTGGTAATCCCCCACGGGCAACAGTTCCGCGCGTTGATGCAAAAAGAGCTGGAGTTCAACAAAATCGGCATGATCGAAACCAGCGCGGTGCTGGCGGGCTTCACTTGTACGGTGGTTAGCGCCCATTTCTGGCCGCTGGCGATGACCGCGATCCTCGGTTATCTGGTCAATAGTGCGGTGAGAACGCTGCTGTTTGGCTACTTTGGCCGCAAAATTTATCGCCCCGGTCTGCATTTCTCGCTGGCGTCGGTGGCACCGAACTTACGCTTTGGTGCCTGGCTGACGGCGGACAGCATCATCAACTATCTCAATACCAACCTTTCAACGCTCGTGCTGGCGCGTATTCTCGGCGCGGGCGTGGCAGGGGGATACAACCTGGCGTACAACGTGGCCGTTGTGCCACCGATGAAGCTGAACCCAATCATCACCCGCGTGTTGTTTCCGGCATTCGCCAAAATTCAGGACGATACCGAAAAGCTGCGTGTTAACTTCTACAAGCTGCTGTCGGTAGTGGGGATTATCAACTTTCCGGCGCTGCTCGGGCTAATGGTGGTGTCGAATAACTTTGTACCGCTGGTCTTTGGTGAGAAGTGGAACAGCATTATTCCGGTGCTGCAATTGCTGTGTGTGGTGGGTCTGCTGCGCTCCGTAGGTAACCCGATTGGTTCGCTGCTGATGGCGAAAGCGCGGGTCGATATCAGCTTTAAATTCAACGTATTCAAAACATTTCTGTTTATTCCGGCGATTGTTATAGGTGGGCAGATGGCGGGCGCGATCGGCGTCACGCTTGGCTTCCTGCTGGTGCAAATTATCAACACCATTCTGAGTTACTTCGTGATGATTAAACCGGTTCTTGGTTCCAGTTATCGCCAGTACATCCTGAGTTTATGGCTGCCGTTTTATCTCTCGCTGCCGACGCTGGTGGTCAGTTATGCGCTGGGCATTGTGCTGAAAGGGCAACTGGCGCTGGGGATGCTGCTGGCGGTGCAAATAGCCACGGGGGTGCTGGCGTTTGTGGTGATGATTGTGCTGTCGCGCCATCCGCTGGTGGTGGAAGTGAAGCGTCAGTTTTGTCGCAGCGAAAAAATGAAAATGCTTTTACGGGCGGGGTGA", + "dna_sequence_length": 1479, + "functions": [ + "putative colanic acid exporter" + ], + "id": "CDS_2031", + "location": [ + [ + "NC_000913", + 2120158, + "-", + 1479 + ] + ], + "md5": "0481bbea428c4b037fd58c1b226ea2d0", + "parent_gene": "", + "protein_md5": "ffa31721c3190d3a7b58a748d24ff227", + "protein_translation": "MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLIGDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTCTVVSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLAVQIATGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG", + "protein_translation_length": 492, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006785" + ], + [ + "gene_synonym", + "ECK2041" + ], + [ + "gene_synonym", + "EcoGene:EG13575" + ], + [ + "gene_synonym", + "GI:16129987" + ], + [ + "gene_synonym", + "GeneID:946583" + ], + [ + "gene_synonym", + "JW2032" + ], + [ + "gene_synonym", + "NP_416551.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71241" + ], + [ + "gene_synonym", + "b2047" + ], + [ + "gene_synonym", + "wcaJ" + ] + ], + "dna_sequence": "ATGACAAATCTAAAAAAGCGCGAGCGAGCGAAAACCAATGCATCGTTAATCTCTATGGTGCAACGCTTTTCAGATATCACCATCATGTTTGCCGGACTATGGCTGGTTTGCGAAGTCAGCGGACTGTCATTCCTCTACATGCACCTGTTGGTGGCGCTGATTACGCTGGTGGTGTTCCAGATGCTGGGCGGCATCACCGATTTTTATCGCTCATGGCGCGGTGTTCGGGCAGCGACAGAATTTGCCCTGTTGCTACAAAACTGGACCTTAAGCGTGATTTTCAGCGCCGGACTGGTGGCGTTCAACAATGATTTCGACACGCAACTGAAAATCTGGCTGGCGTGGTATGCGCTGACCAGCATCGGACTGGTGGTTTGCCGTTCGTGTATTCGCATTGGGGCGGGCTGGCTGCGTAATCATGGCTATAACAAGCGCATGGTCGCGGTGGCGGGGGATTTAGCCGCCGGGCAAATGCTGATGGAGAGCTTCCGTAACCAGCCGTGGTTAGGGTTTGAAGTGGTGGGCGTTTACCACGACCCGAAACCGGGCGGCGTTTCTAACGACTGGGCGGGTAACCTGCAACAGCTGGTCGAGGACGCGAAAGCGGGCAAGATTCATAACGTCTATATCGCGATGCAAATGTGCGACGGCGCGCGAGTGAAAAAACTGGTCCATCAACTGGCGGACACCACCTGTTCGGTGCTGCTGATCCCCGACGTCTTTACCTTCAACATTCTCCATTCACGCCTCGAAGAGATGAACGGCGTACCGGTGGTGCCGCTTTACGACACGCCGCTTTCCGGGGTTAACCGCCTGCTCAAACGTGCGGAAGACATTGTGCTGGCGACGCTTATTCTGCTGCTGATCTCCCCGGTGCTGTGCTGTATTGCGCTGGCGGTGAAACTCAGTTCACCAGGGCCGGTTATTTTCCGCCAGACTCGCTACGGCATGGATGGCAAGCCGATCAAAGTGTGGAAGTTCCGTTCCATGAAAGTGATGGAGAACGACAAAGTGGTGACCCAGGCGACGCAGAACGATCCGCGCGTCACCAAAGTGGGGAACTTTCTGCGCCGTACCTCGCTGGATGAATTGCCGCAGTTTATCAATGTGCTGACCGGGGGGATGTCGATTGTCGGTCCACGTCCGCACGCAGTAGCGCATAACGAACAGTATCGACAGCTCATTGAAGGCTACATGCTGCGCCATAAGGTGAAACCGGGCATTACCGGCTGGGCGCAGATTAACGGCTGGCGCGGCGAAACCGACACGCTGGAGAAAATGGAAAAACGCGTCGAGTTCGACCTTGAGTACATCCGCGAATGGAGCGTCTGGTTCGATATCAAAATCGTTTTCCTGACGGTGTTCAAAGGTTTCGTTAACAAAGCGGCATATTGA", + "dna_sequence_length": 1395, + "functions": [ + "colanic biosynthesis UDP-glucose lipid carrier transferase" + ], + "id": "CDS_2032", + "location": [ + [ + "NC_000913", + 2121554, + "-", + 1395 + ] + ], + "md5": "3abad532de6a823f5ac2aedbdc0677d8", + "parent_gene": "", + "protein_md5": "dcd9c46595faaff45e845431137cdab6", + "protein_translation": "MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY", + "protein_translation_length": 464, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006788" + ], + [ + "gene_synonym", + "ECK2042" + ], + [ + "gene_synonym", + "EcoGene:EG10162" + ], + [ + "gene_synonym", + "GI:16129988" + ], + [ + "gene_synonym", + "GeneID:946574" + ], + [ + "gene_synonym", + "JW2033" + ], + [ + "gene_synonym", + "NP_416552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24175" + ], + [ + "gene_synonym", + "b2048" + ], + [ + "gene_synonym", + "cpsG" + ], + [ + "gene_synonym", + "manB" + ], + [ + "gene_synonym", + "rfbK" + ] + ], + "dna_sequence": "ATGAAAAAATTAACCTGCTTTAAAGCCTATGATATTCGCGGGAAATTAGGCGAAGAACTGAATGAAGATATCGCCTGGCGCATTGGTCGCGCCTATGGCGAATTTCTCAAACCGAAAACCATTGTGTTAGGCGGTGATGTCCGCCTCACCAGCGAAACCTTAAAACTGGCGCTGGCGAAAGGTTTACAGGATGCGGGCGTTGACGTGCTGGATATTGGTATGTCCGGCACCGAAGAGATCTATTTCGCCACGTTCCATCTCGGCGTGGATGGCGGCATTGAAGTTACCGCCAGCCATAATCCGATGGATTATAACGGCATGAAGCTGGTTCGCGAGGGGGCTCGCCCGATCAGCGGAGATACCGGACTGCGCGACGTCCAGCGTCTGGCTGAAGCCAACGACTTTCCTCCCGTCGATGAAACCAAACGCGGTCGCTATCAGCAAATCAACCTGCGTGACGCTTACGTTGATCACCTGTTCGGTTATATCAATGTCAAAAACCTCACGCCGCTCAAGCTGGTGATCAACTCCGGGAACGGCGCAGCGGGTCCGGTGGTGGACGCCATTGAAGCCCGCTTTAAAGCCCTCGGCGCGCCCGTGGAATTAATCAAAGTGCACAACACGCCGGACGGCAATTTCCCCAACGGTATTCCTAACCCACTACTGCCGGAATGCCGCGACGACACCCGCAATGCGGTCATCAAACACGGCGCGGATATGGGCATTGCTTTTGATGGCGATTTTGACCGCTGTTTCCTGTTTGACGAAAAAGGGCAGTTTATTGAGGGCTACTACATTGTCGGCCTGTTGGCAGAAGCATTCCTCGAAAAAAATCCCGGCGCGAAGATCATCCACGATCCACGTCTCTCCTGGAACACCGTTGATGTGGTGACTGCCGCAGGTGGCACGCCGGTAATGTCGAAAACCGGACACGCCTTTATTAAAGAACGTATGCGCAAGGAAGACGCCATCTATGGTGGCGAAATGAGCGCCCACCATTACTTCCGTGATTTCGCTTACTGCGACAGCGGCATGATCCCGTGGCTGCTGGTCGCCGAACTGGTGTGCCTGAAAGATAAAACGCTGGGCGAACTGGTACGCGACCGGATGGCGGCGTTTCCGGCAAGCGGTGAGATCAACAGCAAACTGGCGCAACCCGTTGAGGCGATTAACCGCGTGGAACAGCATTTTAGCCGTGAGGCGCTGGCGGTGGATCGCACCGATGGCATCAGCATGACCTTTGCCGACTGGCGCTTTAACCTGCGCACCTCCAATACCGAACCGGTGGTGCGCCTGAATGTGGAATCGCGCGGTGATGTGCCGCTGATGGAAGCGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAA", + "dna_sequence_length": 1371, + "functions": [ + "phosphomannomutase" + ], + "id": "CDS_2033", + "location": [ + [ + "NC_000913", + 2122979, + "-", + 1371 + ] + ], + "md5": "948de3da318748be13f06ef438fc938f", + "parent_gene": "", + "protein_md5": "c6af55d39b703ee1f45e811904b5b0c8", + "protein_translation": "MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKDKTLGELVRDRMAAFPASGEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE", + "protein_translation_length": 456, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006791" + ], + [ + "gene_synonym", + "ECK2043" + ], + [ + "gene_synonym", + "EcoGene:EG10161" + ], + [ + "gene_synonym", + "GI:16129989" + ], + [ + "gene_synonym", + "GeneID:946580" + ], + [ + "gene_synonym", + "JW2034" + ], + [ + "gene_synonym", + "NP_416553.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24174" + ], + [ + "gene_synonym", + "b2049" + ], + [ + "gene_synonym", + "cpsB" + ], + [ + "gene_synonym", + "manC" + ], + [ + "gene_synonym", + "mni" + ], + [ + "gene_synonym", + "rfbM" + ] + ], + "dna_sequence": "ATGGCGCAGTCGAAACTCTATCCAGTTGTGATGGCAGGTGGCTCCGGTAGCCGCTTATGGCCGCTTTCCCGCGTACTTTATCCCAAGCAGTTTTTATGCCTGAAAGGCGATCTCACCATGCTGCAAACCACCATCTGCCGCCTGAACGGCGTGGAGTGCGAAAGCCCGGTGGTGATTTGCAATGAGCAGCACCGCTTTATTGTCGCGGAACAGCTGCGTCAACTGAACAAACTTACCGAGAACATTATTCTCGAACCGGCAGGGCGAAACACGGCACCTGCCATTGCGCTGGCGGCGCTGGCGGCAAAACGTCATAGCCCGGAGAGCGACCCGTTAATGCTGGTATTGGCGGCGGATCATGTGATTGCCGATGAAGACGCGTTCCGTGCCGCCGTGCGTAATGCCATGCCATATGCCGAAGCGGGCAAGCTGGTGACCTTCGGCATTGTGCCGGATCTACCAGAAACCGGTTATGGCTATATTCGTCGCGGTGAAGTGTCTGCGGGTGAGCAGGATATGGTGGCCTTTGAAGTGGCGCAGTTTGTCGAAAAACCGAATCTGGAAACCGCTCAGGCCTATGTGGCAAGCGGCGAATATTACTGGAACAGCGGTATGTTCCTGTTCCGCGCCGGACGCTATCTCGAAGAACTGAAAAAATATCGCCCGGATATCCTCGATGCCTGTGAAAAAGCGATGAGCGCCGTCGATCCGGATCTCAATTTTATTCGCGTGGATGAAGAAGCGTTTCTCGCCTGCCCGGAAGAGTCGGTGGATTACGCGGTCATGGAACGTACGGCAGATGCTGTTGTGGTGCCGATGGATGCGGGCTGGAGCGATGTTGGCTCCTGGTCTTCATTATGGGAGATCAGCGCCCACACCGCCGAGGGCAACGTTTGCCACGGCGATGTGATTAATCACAAAACTGAAAACAGCTATGTGTATGCTGAATCTGGCCTGGTCACCACCGTCGGGGTGAAAGATCTGGTAGTGGTGCAGACCAAAGATGCGGTGCTGATTGCCGACCGTAACGCGGTACAGGATGTGAAAAAAGTGGTCGAGCAGATCAAAGCCGATGGTCGCCATGAGCATCGGGTGCATCGCGAAGTGTATCGTCCGTGGGGCAAATATGACTCTATCGACGCGGGCGACCGCTACCAGGTGAAACGCATCACCGTGAAACCGGGCGAGGGCTTGTCGGTACAGATGCACCATCACCGCGCGGAACACTGGGTGGTTGTCGCGGGAACGGCAAAAGTCACCATTGATGGTGATATCAAACTGCTTGGTGAAAACGAGTCCATTTATATTCCGCTGGGGGCGACGCATTGCCTGGAAAACCCGGGGAAAATTCCGCTCGATTTAATTGAAGTGCGCTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGTTTCGCGGATCGCTACGGACGGGTGTAA", + "dna_sequence_length": 1437, + "functions": [ + "mannose-1-phosphate guanyltransferase" + ], + "id": "CDS_2034", + "location": [ + [ + "NC_000913", + 2124520, + "-", + 1437 + ] + ], + "md5": "859e5ff059d6fda30ad89c66d0dd3140", + "parent_gene": "", + "protein_md5": "ac6c3bc38a32f8fc0fa0d5e16d50d338", + "protein_translation": "MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLNFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV", + "protein_translation_length": 478, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006794" + ], + [ + "gene_synonym", + "ECK2044" + ], + [ + "gene_synonym", + "EcoGene:EG11790" + ], + [ + "gene_synonym", + "GI:16129990" + ], + [ + "gene_synonym", + "GeneID:946588" + ], + [ + "gene_synonym", + "JW2035" + ], + [ + "gene_synonym", + "NP_416554.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32057" + ], + [ + "gene_synonym", + "b2050" + ], + [ + "gene_synonym", + "wcaI" + ], + [ + "gene_synonym", + "yefD" + ] + ], + "dna_sequence": "ATGAAAATACTGGTCTACGGCATTAACTACTCGCCGGAGTTAACCGGCATCGGCAAATACACCGGCGAGATGGTGGAATGGCTGGCGGCACAAGGTCATGAGGTGCGGGTCATTACCGCACCGCCTTACTACCCGCAATGGCAGGTGGGCGAGAACTATTCCGCCTGGCGCTACAAACGAGAAGAGGGGGCCGCCACGGTGTGGCGCTGCCCGCTGTATGTGCCAAAACAGCCGAGCACCCTGAAACGCCTGTTGCATCTGGGCAGTTTTGCCGTCAGCAGTTTCTTTCCGCTGATGGCGCAACGTCGCTGGAAGCCGGATCGCATTATTGGCGTGGTGCCAACGCTGTTTTGCGCGCCGGGAATGCGCCTGCTGGCGAAACTCTCTGGTGCGCGTACCGTGCTGCATATTCAGGATTACGAAGTGGACGCCATGCTGGGGCTGGGCCTTGCCGGAAAAGGCAAAGGCGGCAAAGTGGCACAGCTGGCAACGGCGTTCGAACGTAGCGGACTGCATAACGTCGATAACGTCTCCACGATTTCGCGTTCGATGATGAATAAAGCCATCGAAAAAGGCGTGGCGGCGGAAAACGTCATCTTCTTCCCCAACTGGTCGGAAATTGCCCGTTTTCAGCATGTTGCAGATGCCGATGTTGATGCCCTTCGTAACCAGCTTGACCTGCCGGATAACAAAAAAATCATTCTTTACTCCGGCAATATTGGTGAAAAGCAGGGGCTGGAAAACGTTATTGAAGCTGCCGATCGTCTGCGCGATGAACCGCTGATTTTTGCCATTGTCGGGCAGGGCGGCGGCAAAGCGCGGCTGGAAAAAATGGCGCAGCAGCGTGGACTGCGCAACATGCAATTTTTCCCGCTGCAATCGTATGACGCTTTACCCGCACTGCTGAAGATGGGCGATTGCCATCTGGTGGTGCAAAAACGCGGCGCGGCAGATGCCGTATTGCCGTCGAAACTGACCAATATTCTGGCAGTAGGCGGTAACGCGGTGATTACTGCTGAAGCCTACACAGAACTGGGGCAGCTTTGCGAAACCTTTCCGGGCATTGCGGTTTGCGTTGAACCGGAATCGGTCGAGGCGCTGGTGGCGGGGATCCGTCAGGCGCTCCTGCTGCCCAAACACAACACGGTGGCACGTGAATATGCCGAACGCACGCTCGATAAAGAGAACGTGTTACGTCAATTTATAAATGATATTCGGGGATAA", + "dna_sequence_length": 1224, + "functions": [ + "putative glycosyl transferase" + ], + "id": "CDS_2035", + "location": [ + [ + "NC_000913", + 2125746, + "-", + 1224 + ] + ], + "md5": "12b20c1b4dde9227660e509269c58ae0", + "parent_gene": "", + "protein_md5": "4eccba8c99c086fd6c9d0f394a967fae", + "protein_translation": "MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQRRWKPDRIIGVVPTLFCAPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVAQLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADVDALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAYTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTLDKENVLRQFINDIRG", + "protein_translation_length": 407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006796" + ], + [ + "gene_synonym", + "ECK2045" + ], + [ + "gene_synonym", + "EcoGene:EG11789" + ], + [ + "gene_synonym", + "GI:90111376" + ], + [ + "gene_synonym", + "GeneID:946559" + ], + [ + "gene_synonym", + "JW5335" + ], + [ + "gene_synonym", + "NP_416555.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32056" + ], + [ + "gene_synonym", + "b2051" + ], + [ + "gene_synonym", + "gmm" + ], + [ + "gene_synonym", + "nudD" + ], + [ + "gene_synonym", + "wcaH" + ], + [ + "gene_synonym", + "yefC" + ] + ], + "dna_sequence": "ATGTTTTTACGTCAGGAAGACTTTGCCACGGTAGTGCGCTCCACTCCGCTTGTCTCTCTCGACTTTATTGTCGAGAACAGTCGCGGCGAGTTTCTGCTTGGCAAAAGAACCAACCGCCCGGCGCAGGGTTACTGGTTTGTGCCGGGAGGGCGCGTGCAGAAAGACGAAACGCTGGAAGCCGCATTTGAGCGGCTGACGATGGCGGAACTGGGGCTGCGTTTGCCGATAACAGCAGGCCAGTTTTACGGTGTCTGGCAGCACTTTTATGACGATAACTTCTCTGGCACGGATTTCACCACTCACTATGTGGTGCTCGGTTTTCGCTTCAGAGTATCGGAAGAAGAGCTGTTACTGCCGGATGAGCAGCATGACGATTACCGCTGGCTGACGTCGGACGCGCTGCTCGCCAGTGATAATGTTCATGCTAACAGCCGCGCCTATTTTCTCGCTGAGAAGCGTACCGGAGTACCCGGATTATGA", + "dna_sequence_length": 480, + "functions": [ + "GDP-mannose mannosyl hydrolase" + ], + "id": "CDS_2036", + "location": [ + [ + "NC_000913", + 2126222, + "-", + 480 + ] + ], + "md5": "be22757a484008d682eb8f4e8bebdd1f", + "parent_gene": "", + "protein_md5": "a2903ac131f1fb9678d1e7d074054bc8", + "protein_translation": "MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006801" + ], + [ + "gene_synonym", + "ECK2046" + ], + [ + "gene_synonym", + "EcoGene:EG11788" + ], + [ + "gene_synonym", + "GI:16129992" + ], + [ + "gene_synonym", + "GeneID:946563" + ], + [ + "gene_synonym", + "JW2037" + ], + [ + "gene_synonym", + "NP_416556.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32055" + ], + [ + "gene_synonym", + "b2052" + ], + [ + "gene_synonym", + "fcl" + ], + [ + "gene_synonym", + "wcaG" + ], + [ + "gene_synonym", + "yefB" + ] + ], + "dna_sequence": "ATGAGTAAACAACGAGTTTTTATTGCTGGTCATCGCGGGATGGTCGGTTCCGCCATCAGGCGGCAGCTCGAACAGCGCGGTGATGTGGAACTGGTATTACGCACCCGCGACGAGCTGAACCTGCTGGACAGCCGCGCCGTGCATGATTTCTTTGCCAGCGAACGTATTGACCAGGTCTATCTGGCGGCGGCGAAAGTGGGCGGCATTGTTGCCAACAACACCTATCCGGCGGATTTCATCTACCAGAACATGATGATTGAGAGCAACATCATTCACGCCGCGCATCAGAACGACGTGAACAAACTGCTGTTTCTCGGATCGTCCTGCATCTACCCGAAACTGGCAAAACAGCCGATGGCAGAAAGCGAGTTGTTGCAGGGCACGCTGGAGCCGACTAACGAGCCTTATGCTATTGCCAAAATCGCCGGGATCAAACTGTGCGAATCATACAACCGCCAGTACGGACGCGATTACCGCTCAGTCATGCCGACCAACCTGTACGGGCCACACGACAACTTCCACCCGAGTAATTCGCATGTGATCCCAGCATTGCTGCGTCGCTTCCACGAGGCGACGGCACAGAATGCGCCGGACGTGGTGGTATGGGGCAGCGGTACACCGATGCGCGAATTTCTGCACGTCGATGATATGGCGGCGGCGAGCATTCATGTCATGGAGCTGGCGCATGAAGTCTGGCTGGAGAACACCCAGCCGATGTTGTCGCACATTAACGTCGGCACGGGCGTTGACTGCACTATCCGCGAGCTGGCGCAAACCATCGCCAAAGTGGTGGGTTACAAAGGCCGGGTGGTTTTTGATGCCAGCAAACCGGATGGCACGCCGCGCAAACTGCTGGATGTGACGCGCCTGCATCAGCTTGGCTGGTATCACGAAATCTCACTGGAAGCGGGGCTTGCCAGCACTTACCAGTGGTTCCTTGAGAATCAAGACCGCTTTCGGGGGTAA", + "dna_sequence_length": 966, + "functions": [ + "bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase" + ], + "id": "CDS_2037", + "location": [ + [ + "NC_000913", + 2127190, + "-", + 966 + ] + ], + "md5": "384191419eb4e6af884a4b661c7ebb88", + "parent_gene": "", + "protein_md5": "6c47be6c23f460a9f669eeaacaeaa588", + "protein_translation": "MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006803" + ], + [ + "gene_synonym", + "ECK2047" + ], + [ + "gene_synonym", + "EcoGene:EG11787" + ], + [ + "gene_synonym", + "GI:16129993" + ], + [ + "gene_synonym", + "GeneID:946562" + ], + [ + "gene_synonym", + "JW2038" + ], + [ + "gene_synonym", + "NP_416557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC88" + ], + [ + "gene_synonym", + "b2053" + ], + [ + "gene_synonym", + "gmd" + ], + [ + "gene_synonym", + "yefA" + ], + [ + "gene_synonym", + "yefN" + ] + ], + "dna_sequence": "ATGTCAAAAGTCGCTCTCATCACCGGTGTAACCGGACAAGACGGTTCTTACCTGGCAGAGTTTCTGCTGGAAAAAGGTTACGAGGTGCATGGTATTAAGCGTCGCGCATCGTCATTCAACACCGAGCGCGTGGATCACATTTATCAGGATCCGCACACCTGCAACCCGAAATTCCATCTGCATTATGGCGACCTGAGTGATACCTCTAACCTGACGCGCATTTTGCGTGAAGTACAGCCGGATGAAGTGTACAACCTGGGCGCAATGAGCCACGTTGCGGTCTCTTTTGAGTCACCAGAATATACCGCTGACGTCGACGCGATGGGTACGCTGCGCCTGCTGGAGGCGATCCGCTTCCTCGGTCTGGAAAAGAAAACTCGTTTCTATCAGGCTTCCACCTCTGAACTGTATGGTCTGGTGCAGGAAATTCCGCAGAAAGAGACCACGCCGTTCTACCCGCGATCTCCGTATGCGGTCGCCAAACTGTACGCCTACTGGATCACCGTTAACTACCGTGAATCCTACGGCATGTACGCCTGTAACGGAATTCTCTTCAACCATGAATCCCCGCGCCGCGGCGAAACCTTCGTTACCCGCAAAATCACCCGCGCAATCGCCAACATCGCCCAGGGGCTGGAGTCGTGCCTGTACCTCGGCAATATGGATTCCCTGCGTGACTGGGGCCACGCCAAAGACTACGTAAAAATGCAGTGGATGATGCTGCAGCAGGAACAGCCGGAAGATTTCGTTATCGCGACCGGCGTTCAGTACTCCGTGCGTCAGTTCGTGGAAATGGCGGCAGCACAGCTGGGCATCAAACTGCGCTTTGAAGGCACGGGCGTTGAAGAGAAGGGCATTGTGGTTTCCGTCACCGGGCATGACGCGCCGGGCGTTAAACCGGGTGATGTGATTATCGCTGTTGACCCGCGTTACTTCCGTCCGGCTGAAGTTGAAACGCTGCTCGGCGACCCGACCAAAGCGCACGAAAAACTGGGCTGGAAACCGGAAATCACCCTCAGAGAGATGGTGTCTGAAATGGTGGCTAATGACCTCGAAGCGGCGAAAAAACACTCTCTGCTGAAATCTCACGGCTACGACGTGGCGATCGCGCTGGAGTCATAA", + "dna_sequence_length": 1122, + "functions": [ + "GDP-D-mannose dehydratase, NAD(P)-binding" + ], + "id": "CDS_2038", + "location": [ + [ + "NC_000913", + 2128314, + "-", + 1122 + ] + ], + "md5": "994ef03b863c06b3420e4565d67d96f1", + "parent_gene": "", + "protein_md5": "d6a0ba6bed90c6f7d54a08c3fbbcd213", + "protein_translation": "MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES", + "protein_translation_length": 373, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006805" + ], + [ + "gene_synonym", + "ECK2048" + ], + [ + "gene_synonym", + "EcoGene:EG13574" + ], + [ + "gene_synonym", + "GI:16129994" + ], + [ + "gene_synonym", + "GeneID:946578" + ], + [ + "gene_synonym", + "JW2039" + ], + [ + "gene_synonym", + "NP_416558.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACD2" + ], + [ + "gene_synonym", + "b2054" + ], + [ + "gene_synonym", + "wcaF" + ] + ], + "dna_sequence": "ATGCAAGATTTAAGCGGTTTCTCGGTGCCGAAAGGGTTCCGGGGCGGCAACGCTATTAAAGTGCAATTATGGTGGGCAGTACAGGCAACAATATTTGCCTGGTCGCCACAAGTATTGTATCGCTGGCGGGCTTTTTTATTACGTTTATTCGGAGCAAAAATAGGAAAAAACGTAGTTATTCGTCCGTCAGTAAAAATTACCTATCCGTGGAAATTAACCTTAGGTGATTACGCGTGGGTCGGCGATGACGTCAATTTATATACCCTCGGTGAAATAACCATTGGCGCACATTCGGTGATATCGCAAAAAAGTTATTTATGCACCGGTAGCCACGACCATGCAAGTCAACATTTCACCATTAACGCCACGCCTATTGTGATTGGCGAGAAATGCTGGCTGGCAACCGATGTCTTTGTTGCCCCAGGCGTCACAATCGGCGACGGCACCGTCGTGGGTGCACGAAGCAGTGTTTTTAAATCGCTTCCGGCAAATGTGGTTTGCCGGGGGAATCCCGCAGTGGTGATACGCGAACGCGTTGAAACTGAATAA", + "dna_sequence_length": 549, + "functions": [ + "putative acyl transferase" + ], + "id": "CDS_2039", + "location": [ + [ + "NC_000913", + 2128888, + "-", + 549 + ] + ], + "md5": "13a5b631f0e3f45c68cdbd13b9ac4bc5", + "parent_gene": "", + "protein_md5": "a68724c1a84d06661c8dd2c208fc6342", + "protein_translation": "MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRAFLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006807" + ], + [ + "gene_synonym", + "ECK2049" + ], + [ + "gene_synonym", + "EcoGene:EG13573" + ], + [ + "gene_synonym", + "GI:16129995" + ], + [ + "gene_synonym", + "GeneID:946543" + ], + [ + "gene_synonym", + "JW2040" + ], + [ + "gene_synonym", + "NP_416559.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71239" + ], + [ + "gene_synonym", + "b2055" + ], + [ + "gene_synonym", + "wcaE" + ] + ], + "dna_sequence": "ATGTTGCTTAGCATAATCACTGTCGCGTTTCGTAACCTCGAAGGGATAGTCAAAACACATGCCTCGCTGGCGCATCTGGCGCAGGTGGAAGATATCAGCTTCGAATGGATTGTTGTCGATGGCGGTTCCAACGACGGCACCCGTGAGTATCTGGAAAATCTCAATGGTATCTTTAACCTACGCTTTGTCAGCGAGCCAGATAACGGTATCTACGACGCCATGAACAAAGGCATTGCGATGGCACAAGGCAAGTTCGCGTTGTTTCTCAATTCGGGCGATATTTTTCATCAGAATGCCGCAAATTTTGTCCGTAAGTTAAAAATGCAAAAAGATAACGTGATGATCACCGGCGATGCGCTGCTGGATTTTGGCGACGGGCATAAAATTAAACGTAGCGCCAAACCGGGCTGGTATATTTATCACAGCCTGCCCGCCAGTCATCAGGCGATATTTTTCCCTGTATCCGGCTTGAAAAAATGGCGTTATGACCTGGAATATAAAGTTTCTTCCGACTACGCGCTGGCAGCCAAAATGTATAAAGCCGGTTATGCATTTAAAAAACTCAATGGCCTGGTGTCTGAATTTTCCATGGGTGGGGTATCTACCACCAATAATATGGAATTGTGTGCTGACGCGAAAAAAGTCCAACGACAAATATTACATGTGCCTGGCTTTTGGGCTGAATTATCCTGGCATTTACGCCAACGTACTACCTCAAAGACGAAAGCCTTATATAACAAAGTCTGA", + "dna_sequence_length": 747, + "functions": [ + "putative glycosyl transferase" + ], + "id": "CDS_2040", + "location": [ + [ + "NC_000913", + 2129650, + "-", + 747 + ] + ], + "md5": "6b7eb926e063fe497da28732c1355edc", + "parent_gene": "", + "protein_md5": "c815d343b6a9233a5612ac430919ea89", + "protein_translation": "MLLSIITVAFRNLEGIVKTHASLAHLAQVEDISFEWIVVDGGSNDGTREYLENLNGIFNLRFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQNAANFVRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSKTKALYNKV", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006809" + ], + [ + "gene_synonym", + "ECK2050" + ], + [ + "gene_synonym", + "EcoGene:EG13572" + ], + [ + "gene_synonym", + "GI:16129996" + ], + [ + "gene_synonym", + "GeneID:946550" + ], + [ + "gene_synonym", + "JW2041" + ], + [ + "gene_synonym", + "NP_416560.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71238" + ], + [ + "gene_synonym", + "b2056" + ], + [ + "gene_synonym", + "wcaD" + ] + ], + "dna_sequence": "ATGTCAACTTCTATCAGAATCTGTAGCTACCTGTTGCTGCCGCTGATTTATCTGCTGGTTAACGTCAAAATCGCCCAGCTTGGCGAAAGTTTCCCCATCACCATCGTCACTTTTTTACCTGTCTTGTTACTGCTGTTTTTAGAACGCATCAGCGTTAAAAAATTGATGATTGCCTTAGGGATTGGCGCGGGACTCACGGCGTTTAACTATCTGTTTGGTCAGTCGCTGGATGCCAGTAAATACGTCACTTCAACTATGCTGTTTGTCTATATTGTGATCATTATTGGCATGGTGTGGAGTATTCGTTTTAAAACAATTTCGCCACACAACCATCGCAAGATATTACGTTTCTTTTATCTGGTGGTCGGGCTGGTGGTGGCGCTGGCGGCGGTGGAGATGGCACAAATTATCCTCACCGGTGGCAGCAGTATTATGGAGTCGATTTCGAAATATCTGATTTACAGCAACAGCTATGTGCTGAATTTCATTAAATTCGGCGGCAAGCGCACGACAGCACTTTATTTCGAACCGGCATTTTTCGCTCTGGCATTAATCTCAATTTGGCTCAGCATCAAACAGTTTGGTATCAAAACGCCTAAAACAGATGCTATGATTCTCGCAGGGATAATATTATCCGGATCGTTTTCAGGGGTTATGACCTTTATCCTGTTTTATTTGCTGGAGTGGGCATTTCAATATCTGAATAAAGAGGCGATTAAGAAAAAGTTACCGTTAGCATTGATTTCTCTGGCTGTATTCCTGGTTGGTGTGGTAATCGCGTTTCCTTATATTTCCACCCGTCTGGGCGATTTAGGTACGGAAGGATCGTCATCATATTATCGTATTGTCGGTCCGCTGGTGATGGTCGGTTATTCTTTGACCCATATTGACGGTGTAGTCAGATTTGGCTCACTTTATGAATATGTCGCATCATTCGGAATATTTAACGGTGCGGATGTCGGAAAAACCATAGACAATGGTTTGTATCTGCTGATTATTTATTTTTCCTGGTTCGCGGTGTTTTTATCACTGTGGTACATGGGGAAAGTGATAAAAATGATGATCAACGCTTTTGGTGATAACCGCAATTTTCGCGTGCAATTATATCTTTTTACTCCGGTATCGCTGTTTTTTACCGGTTCGATATTTAGCCCGGAATATGCATTTTTAATCGTCTGTCCGTTTATTTTGCGAAAAGCGTTAAATATTACGAGGTAA", + "dna_sequence_length": 1218, + "functions": [ + "putative colanic acid polymerase" + ], + "id": "CDS_2041", + "location": [ + [ + "NC_000913", + 2130878, + "-", + 1218 + ] + ], + "md5": "ce114f5637c069dc8ee75041089f3382", + "parent_gene": "", + "protein_md5": "970b4d613a04026865116f0add6e5f5d", + "protein_translation": "MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006811" + ], + [ + "gene_synonym", + "ECK2051" + ], + [ + "gene_synonym", + "EcoGene:EG13571" + ], + [ + "gene_synonym", + "GI:16129997" + ], + [ + "gene_synonym", + "GeneID:946579" + ], + [ + "gene_synonym", + "JW2042" + ], + [ + "gene_synonym", + "NP_416561.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71237" + ], + [ + "gene_synonym", + "b2057" + ], + [ + "gene_synonym", + "wcaC" + ] + ], + "dna_sequence": "ATGAATATTTTGCAATTTAATGTGCGACTGGCGGAAGGCGGGGCAGCAGGTGTGGCGTTAGATCTCCACCAGCGTGCGCTGCAACAGGGGCTGGCGTCACATTTTGTCTACGGTTACGGCAAAGGCGGCAAAGAGAGCGTCAGCCATCAGAACTATCCGCAGGTCATCAAACATACGCCGCGGATGACCGCGATGGCGAATATTGCTCTGTTTCGTCTGTTTAATCGCGATCTGTTTGGCAATTTCAATGAGTTATATCGCACCATTACTCGCACAGCGGGTCCGGTGGTCCTGCATTTTCATGTGCTGCACAGCTACTGGCTAAATCTTAAGAGCGTGGTGCGCTTTTGCGAAAAAGTGAAAAACCATAAACCGGACGTCACTCTGGTCTGGACGCTGCACGACCACTGGAGTGTTACCGGACGCTGCGCCTTTACCGACGGTTGCGAAGGCTGGAAAACAGGCTGCCAGAAATGCCCGACCTTAAATAACTATCCGCCGGTGAAGATTGATCGCGCACACCAACTGGTGGCGGGCAAACGCCAGTTATTCCGTGAGATGCTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCAGCATGTGGCTGACGCTTTCAATAGCCTGTACGGTCCAGGGCGTTGCCGGATTATCAATAATGGCATTGATATGGCAACTGAAGCGATTCTGGCGGACTTGCCTCCGGTGCGCGAAACCCAGGGCAAGCCGAAAATCGCGGTGGTGGCGCATGATCTGCGTTACGACGGCAAAACTAACCAGCAACTGGTACGCGAGATGATGGCGCTGGGCGACAAAATTGAACTGCATACCTTTGGTAAGTTCTCGCCGTTCACCGCTGGCAACGTGGTTAATCACGGCTTTGAAACCGACAAACGTAAGCTGATGAGCGCGCTCAATCAGATGGATGCGCTGGTATTCAGTTCTCGCGTCGATAACTACCCGCTGATTTTGTGTGAGGCGCTATCGATTGGCGTGCCGGTGATTGCCACCCATAGCGATGCGGCGCGGGAAGTGTTGCAAAAATCCGGCGGTAAAACCGTCAGCGAAGAAGAGGTGCTGCAACTGGTGCAGTTAAGCAAACCGGAAATCGCGCAGGCGATATTTGGTACCACGCTGGCTGAGTTCAGCCAACGCAGCCGCGCCGCCTACAGTGGACAACAGATGCTGGAGGAGTATGTCAACTTCTATCAGAATCTGTAG", + "dna_sequence_length": 1218, + "functions": [ + "putative glycosyl transferase" + ], + "id": "CDS_2042", + "location": [ + [ + "NC_000913", + 2132070, + "-", + 1218 + ] + ], + "md5": "9e5b2e4efe2b6ee4d721277b51230915", + "parent_gene": "", + "protein_md5": "c49e1b8ee4db60632d7f2026faa0d50c", + "protein_translation": "MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006813" + ], + [ + "gene_synonym", + "ECK2052" + ], + [ + "gene_synonym", + "EcoGene:EG13570" + ], + [ + "gene_synonym", + "GI:16129998" + ], + [ + "gene_synonym", + "GeneID:946573" + ], + [ + "gene_synonym", + "JW2043" + ], + [ + "gene_synonym", + "NP_416562.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACC9" + ], + [ + "gene_synonym", + "b2058" + ], + [ + "gene_synonym", + "wcaB" + ] + ], + "dna_sequence": "ATGCTGGAAGATCTGCGCGCCAACAGCTGGAGTTTACGCCCGTGCTGCATGGTTCTTGCCTATCGTGTTGCTCATTTTTGTTCGGTGTGGCGCAAAAAGAACGTCCTCAACAATCTGTGGGCGGCCCCGCTGCTGGTGCTGTATCGCATTATCACCGAATGCTTTTTCGGTTATGAAATCCAGGCTGCCGCGACCATTGGCCGCCGCTTTACTATCCATCACGGTTACGCCGTCGTGATCAATAAAAACGTGGTAGCGGGGGATGATTTTACCATTCGCCACGGCGTCACTATCGGCAATCGTGGTGCCGATAACATGGCATGTCCACACATTGGCAACGGCGTCGAACTCGGTGCCAACGTCATTATTCTTGGTGATATCACGCTTGGTAACAACGTCACCGTGGGCGCGGGCAGCGTGGTGCTCGACTCTGTCCCGGACAACGCGCTGGTGGTGGGAGAAAAAGCGCGAGTGAAGGTAATTAAATGA", + "dna_sequence_length": 489, + "functions": [ + "putative acyl transferase" + ], + "id": "CDS_2043", + "location": [ + [ + "NC_000913", + 2132555, + "-", + 489 + ] + ], + "md5": "b50f26014cdc5a9bb39083c511ec7dab", + "parent_gene": "", + "protein_md5": "8ca874c561ea416a208dae5f798cfc0c", + "protein_translation": "MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006816" + ], + [ + "gene_synonym", + "ECK2053" + ], + [ + "gene_synonym", + "EcoGene:EG13569" + ], + [ + "gene_synonym", + "GI:16129999" + ], + [ + "gene_synonym", + "GeneID:946570" + ], + [ + "gene_synonym", + "JW2044" + ], + [ + "gene_synonym", + "NP_416563.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77414" + ], + [ + "gene_synonym", + "b2059" + ], + [ + "gene_synonym", + "wcaA" + ] + ], + "dna_sequence": "ATGAAAAACAATCCGCTGATCTCAATCTATATGCCGACCTGGAACCGCCAACAACTGGCGATTCGGGCAATAAAATCGGTTTTGCGCCAGGACTACAGCAACTGGGAGATGATCATCGTGGATGATTGCTCCACCTCCTGGGAACAACTGCAACAGTACGTCACCGCCCTCAACGATCCGCGTATCACTTACATTCACAACGACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATTGATGACGATGACGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTAACGACTACGTTTGCCAGGGCGAAGTCTATTCCCAACCGGCAAGCTTGCCGCTGTATCCCAAATCGCCGTATTCACGCCGCCTGTTCTACAAACGCAATATCATTGGCAACCAGGTCTTTACCTGGGCATGGCGTTTCAAAGAGTGTTTGTTCGATACCGAACTGAAAGCGGCACAGGATTACGACATCTTCCTGCGGATGGTGGTGGAGTACGGCGAACCGTGGAAAGTAGAAGAGGCGACGCAGATCCTGCATATCAATCACGGTGAAATGCAGATCACCTCGTCACCGAAAAAATTCTCCGGGTACTTCCACTTTTACCGCAAGCACAAAGACAAATTCGACCGCGCCAGCAAAAAATATCAGCTGTTTACCCTCTACCAGATCCGCAATAAACGTATGACCTGGCGCACTTTGCTGACGCTGCTGTCGGTGCGTAACGGCAAACGTCTGGCTGATGGTATTCGGGGGCGCTAA", + "dna_sequence_length": 840, + "functions": [ + "putative glycosyl transferase" + ], + "id": "CDS_2044", + "location": [ + [ + "NC_000913", + 2133397, + "-", + 840 + ] + ], + "md5": "0e0fbd74bbccdf97a5a940eca9099cec", + "parent_gene": "", + "protein_md5": "168bb631a463470e53944fa8b3e1b28d", + "protein_translation": "MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR", + "protein_translation_length": 279, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006819" + ], + [ + "gene_synonym", + "ECK2054" + ], + [ + "gene_synonym", + "EcoGene:EG13568" + ], + [ + "gene_synonym", + "GI:90111377" + ], + [ + "gene_synonym", + "GeneID:946567" + ], + [ + "gene_synonym", + "JW2045" + ], + [ + "gene_synonym", + "NP_416564.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76387" + ], + [ + "gene_synonym", + "b2060" + ], + [ + "gene_synonym", + "wzc" + ] + ], + "dna_sequence": "ATGACAGAAAAAGTAAAACAACATGCCGCTCCGGTAACGGGCAGTGATGAAATCGATATTGGTCGCCTGGTCGGCACCGTCATTGAAGCGCGCTGGTGGGTGATTGGCATCACCACCGTATTCGCCCTCTGTGCCGTGGTTTACACCTTCTTCGCCACGCCGATTTATAGTGCCGACGCACTGGTACAAATCGAGCAAAACAGCGGCAATTCGTTAGTGCAGGACATTGGTTCGGCATTAGCCAACAAACCGCCTGCATCGGACGCCGAGATCCAGTTGATTCGTTCGCGTCTGGTGCTTGGTAAAACGGTGGACGATCTCGACCTCGATATTGCAGTGAGCAAAAACACGTTCCCGATTTTCGGTGCGGGCTGGGATCGCCTGATGGGACGTCAGAACGAGACGGTGAAAGTGACCACCTTTAACCGCCCGAAAGAGATGGCGGATCAGGTGTTTACGCTTAATGTGCTGGACAACAAAAACTACACCCTGAGCAGCGACGGCGGCTTTAGCGCCCGGGGGCAAGCGGGCCAGATGCTGAAAAAAGAAGGCGTCACGCTGATGGTTGAAGCCATTCACGCCAGCCCGGGCAGTGAGTTTACCGTCACCAAATACTCCACGCTGGGGATGATCAACCAACTGCAAAACAGCCTGACGGTAACGGAGAACGGCAAAGACGCTGGCGTTTTGAGCCTGACTTATACCGGTGAAGATCGTGAACAGATCCGCGACATTCTTAACAGCATCGCCCGTAACTATCAGGAACAAAATATTGAGCGCAAATCGGCGGAAGCGTCGAAAAGCCTCGCCTTCCTCGCGCAACAGTTACCGGAAGTACGTAGCCGCTTGGATGTTGCCGAAAACAAACTGAATGCCTTCCGTCAGGATAAAGATTCTGTTGATCTGCCGCTGGAAGCAAAAGCGGTGCTCGATTCGATGGTGAACATCGATGCGCAGTTGAACGAACTGACCTTTAAAGAGGCGGAAATCTCCAAGCTGTACACCAAAGTTCACCCGGCGTACCGCACGCTGCTGGAGAAACGTCAGGCGCTGGAAGACGAAAAAGCCAAACTTAACGGTCGCGTAACGGCGATGCCGAAAACCCAGCAGGAGATTGTCCGTCTGACCCGCGATGTCGAGTCTGGTCAGCAGGTCTATATGCAACTGCTGAATAAAGAGCAGGAGCTGAAAATCACCGAGGCCAGCACCGTCGGCGATGTGCGCATTGTTGACCCGGCAATCACTCAGCCTGGCGTGCTGAAACCGAAGAAAGGGCTGATTATCCTCGGCGCGATTATCCTTGGCCTGATGCTTTCTATCGTGGGTGTGCTGCTGCGCTCGTTGTTTAATCGCGGCATTGAAAGCCCGCAAGTACTGGAAGAACACGGTATTAGCGTCTATGCCAGCATCCCGCTGTCGGAATGGCAGAAAGCGCGTGATAGCGTCAAAACCATCAAAGGGATTAAACGCTATAAACAGAGCCAGCTACTGGCGGTGGGGAATCCAACCGATCTGGCGATTGAAGCCATCCGTAGTCTGCGTACCAGTTTGCACTTCGCGATGATGCAGGCACAGAACAATGTGTTGATGATGACCGGGGTTAGCCCGTCAATTGGTAAAACCTTTGTCTGCGCCAACCTGGCGGCGGTGATCAGCCAGACCAATAAACGCGTGTTGTTGATCGACTGCGATATGCGCAAAGGCTACACCCACGAGCTGTTGGGCACTAATAACGTTAATGGCCTGTCGGAAATTCTGATTGGTCAGGGCGATATTACTACCGCTGCTAAACCGACCTCTATTGCCAAATTTGACCTGATCCCGCGCGGTCAGGTGCCGCCAAATCCTTCTGAACTGTTGATGAGCGAACGCTTTGCCGAACTGGTGAACTGGGCGAGTAAAAACTATGACCTGGTGTTGATTGATACGCCGCCGATTCTGGCAGTGACCGATGCGGCAATTGTTGGTCGTCATGTCGGAACCACGTTAATGGTGGCGCGTTATGCGGTCAACACATTGAAAGAAGTGGAAACCAGTCTGAGCCGCTTTGAGCAAAACGGTATTCCGGTGAAAGGGGTGATTCTGAACTCCATCTTCCGCCGCGCCAGCGCGTATCAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAA", + "dna_sequence_length": 2163, + "functions": [ + "colanic acid production tyrosine-protein kinase", + "autokinase", + "Ugd phosphorylase" + ], + "id": "CDS_2045", + "location": [ + [ + "NC_000913", + 2135652, + "-", + 2163 + ] + ], + "md5": "5480d8a32e3b362151655202558ccdb9", + "parent_gene": "", + "protein_md5": "df67e97517ba2f8418d35b8c0e6906a8", + "protein_translation": "MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITTVFALCAVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGKTVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDNKNYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHASPGSEFTVTKYSTLGMINQLQNSLTVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLYTKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKEQELKITEASTVGDVRIVDPAITQPGVLKPKKGLIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK", + "protein_translation_length": 720, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006822" + ], + [ + "gene_synonym", + "ECK2055" + ], + [ + "gene_synonym", + "EcoGene:EG13567" + ], + [ + "gene_synonym", + "GI:16130001" + ], + [ + "gene_synonym", + "GeneID:946564" + ], + [ + "gene_synonym", + "JW2046" + ], + [ + "gene_synonym", + "NP_416565.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAB2" + ], + [ + "gene_synonym", + "b2061" + ], + [ + "gene_synonym", + "wzb" + ] + ], + "dna_sequence": "ATGTTTAACAACATCTTAGTTGTCTGTGTCGGCAATATTTGCCGTTCCCCGACGGCGGAACGCTTACTGCAACGTTATCACCCGGAGCTGAAAGTGGAGTCCGCTGGACTCGGCGCGCTGGTCGGTAAGGGCGCTGATCCTACCGCTATCAGCGTCGCCGCAGAACATCAACTGTCTCTGGAAGGTCACTGTGCCCGTCAAATCAGCCGCCGTCTGTGTCGCAACTACGACCTGATTTTGACCATGGAAAAGCGCCATATCGAACGCTTATGCGAGATGGCACCGGAGATGCGCGGCAAAGTGATGCTGTTTGGTCACTGGGATAACGAATGTGAAATCCCCGATCCGTATCGCAAAAGCCGGGAAACGTTTGCAGCGGTGTACACATTACTTGAACGGTCTGCCCGCCAGTGGGCGCAGGCATTGAACGCAGAGCAGGTATAA", + "dna_sequence_length": 444, + "functions": [ + "colanic acid production protein-tyrosine-phosphatase", + "Wzc-P dephosphorylase" + ], + "id": "CDS_2046", + "location": [ + [ + "NC_000913", + 2136098, + "-", + 444 + ] + ], + "md5": "f8e19df95db993448ee0803e20a70beb", + "parent_gene": "", + "protein_md5": "44e6c4215aea61e17ba2111cbe576c39", + "protein_translation": "MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006825" + ], + [ + "gene_synonym", + "ECK2056" + ], + [ + "gene_synonym", + "EcoGene:EG13566" + ], + [ + "gene_synonym", + "GI:16130002" + ], + [ + "gene_synonym", + "GeneID:946558" + ], + [ + "gene_synonym", + "JW2047" + ], + [ + "gene_synonym", + "NP_416566.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A930" + ], + [ + "gene_synonym", + "b2062" + ], + [ + "gene_synonym", + "wza" + ] + ], + "dna_sequence": "ATGATGAAATCCAAAATGAAATTGATGCCATTATTGGTGTCAGTAACCTTGATAAGCGGTTGCACAGTACTTCCGGGCAGCAATATGTCGACGATGGGCAAAGACGTCATCAAACAGCAGGACGCTGATTTCGATCTCGACAAAATGGTGAATGTTTATCCGCTGACCCCGCGCCTGATTGACCAATTACGCCCACGCCCGAATGTAGCGCGCCCCAATATGACGCTGGAAAGTGAGATCGCGAATTACCAGTATCGCGTCGGGCCGGGGGACGTTCTTAATGTCACCGTCTGGGATCACCCGGAACTCACCACGCCAGCCGGTCAGTACCGCAGCTCCAGCGACACCGGCAACTGGGTACAGCCTGACGGCACTATGTTTTACCCGTATATCGGCAAGGTCCACGTAGTCGGGAAAACGCTCGCTGAAATCCGCAGTGATATTACCGGGCGCTTAGCGACGTACATCGCTGACCCGCAGGTGGACGTTAATATCGCCGCCTTCCGCTCACAAAAGGCCTATATCTCCGGTCAGGTGAATAAATCCGGTCAACAGGCGATCACCAACGTGCCACTGACTATTCTCGACGCCATCAACGCCGCAGGTGGCCTGACCGACACCGCTGACTGGCGCAACGTGGTGCTAACACACAATGGTCGTGAAGAGCGCATTTCTTTGCAGGCGCTGATGCAAAACGGCGACCTCAACCAGAATCGCCTGCTTTACCCCGGCGATATTCTCTACGTGCCACGTAATGATGATCTGAAAGTATTTGTGATGGGTGAAGTGAAGAAACAGAGCACCCTGAAAATGGACTTTAGCGGCATGACCCTGACTGAAGCCCTGGGCAATGCTGAAGGCATCGACATGACCACCTCCAACGCCAGCGGCATCTTTGTCATTCGTCCGCTGAAAGGCGAGGGCGGGCGTAACGGCAAGATTGCCAATATCTACCAGCTGGATATGTCCGATGCCACGTCGCTGGTGATGGCGACAGAATTCCGCCTGCAACCTTATGACGTGGTGTATGTCACCACCGCCCCGGTTTCCCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACTATTAGCGGTGTCCGTTACATGACGGATACAGCCAGCGACATTCATAACTGGTAA", + "dna_sequence_length": 1140, + "functions": [ + "colanic acid export protein", + "outer membrane auxillary lipoprotein" + ], + "id": "CDS_2047", + "location": [ + [ + "NC_000913", + 2137243, + "-", + 1140 + ] + ], + "md5": "556fb9764399563e12264f90733b720b", + "parent_gene": "", + "protein_md5": "fbf2c72bb12d39b5535a3321e981738d", + "protein_translation": "MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006830" + ], + [ + "gene_synonym", + "ECK2057" + ], + [ + "gene_synonym", + "EcoGene:EG14051" + ], + [ + "gene_synonym", + "GI:90111378" + ], + [ + "gene_synonym", + "GeneID:946566" + ], + [ + "gene_synonym", + "JW5336" + ], + [ + "gene_synonym", + "NP_416567.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76389" + ], + [ + "gene_synonym", + "b2063" + ], + [ + "gene_synonym", + "yegH" + ] + ], + "dna_sequence": "ATGGAATGGATTGCCGATCCGTCTATCTGGGCCGGGTTAATCACGCTGATTGTGATCGAACTGGTCCTCGGCATTGATAACCTGGTCTTTATTGCCATCCTCGCCGAAAAACTACCGCCGAAGCAGCGTGACCGCGCACGGGTTACCGGGCTGCTGCTGGCAATGTTAATGCGCCTGTTACTGCTGGCGTCAATCTCCTGGCTGGTCACCCTGACTCAACCGCTGTTCAGCTTCCGCTCGTTTACCTTTAGCGCCCGCGACTTAATCATGCTGTTTGGTGGTTTCTTCCTGTTGTTCAAAGCCACGATGGAGCTGAACGAACGGCTGGAAGGGAAAGACAGCAATAATCCCACACAACGCAAAGGTGCGAAGTTCTGGGGCGTGGTGACGCAAATTGTGGTACTGGACGCCATTTTCTCACTCGACTCAGTGATTACCGCCGTCGGGATGGTCGACCATTTACTGGTCATGATGGCCGCCGTGGTTATCGCTATCAGCCTGATGTTGATGGCCAGCAAGCCGTTAACGCAATTTGTTAACAGTCACCCGACGATCGTTATTCTCTGCTTAAGCTTCCTGTTGATGATTGGCTTTAGCCTGGTGGCAGAAGGTTTCGGCTTCGTCATTCCGAAAGGCTACCTGTACGCTGCCATTGGTTTCTCGGTGATGATCGAGGCGCTCAATCAGTTGGCTATCTTTAACCGGCGACGTTTTCTTTCCGCTAACCAGACGCTGCGCCAGCGGACTACCGAAGCGGTAATGCGCCTGCTTAGCGGGCAAAAAGAAGATGCGGAACTGGACGCCGAAACCGCGTCCATGCTGGTGGATCATGGTAACCAGCAGATCTTTAATCCGCAGGAACGGCGGATGATTGAGCGGGTACTTAATCTTAACCAGCGTACCGTCAGCAGCATTATGACGTCGCGCCACGATATTGAGCATATCGATCTCAACGCGCCGGAAGAAGAAATCCGCCAGTTGCTGGAGCGAAATCAGCATACGCGGCTGGTGGTTACCGACGGTGATGACGCAGAAGATTTGCTCGGTGTTGTTCACGTTATCGACCTGCTACAACAGTCTCTGCGCGGCGAACCGCTCAACCTGCGGGTGTTGATTCGCCAGCCGCTGGTGTTCCCGGAAACCTTGCCGTTGTTACCTGCCCTGGAGCAGTTCCGTAATGCCCGCACGCACTTTGCTTTTGTGGTGGATGAGTTTGGCTCGGTGGAAGGGATTGTGACATTAAGTGACGTCACTGAAACCATTGCCGGTAACTTACCGAACGAAGTGGAAGAGATCGACGCCCGCCATGATATTCAGAAGAATGCGGACGGTTCCTGGACGGCGAATGGTCATATGCCGCTGGAGGATCTGGTGCAATATGTGCCGCTGCCGCTGGATGAAAAACGTGAATATCACACCATTGCCGGGCTGTTGATGGAGTATTTGCAGCGTATTCCAAAACCTGGCGAAGAAGTTCAGGTGGGGGATTATTTGCTTAAAACGTTGCAGGTAGAAAGCCATCGCGTGCAGAAGGTGCAGATTATACCGCTGCGTAAGGATGGCGAGATGGAGTACGAGGTGTGA", + "dna_sequence_length": 1584, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_2048", + "location": [ + [ + "NC_000913", + 2137902, + "+", + 1584 + ] + ], + "md5": "908a01328ba4f6e5980840bd232a8fde", + "parent_gene": "", + "protein_md5": "62009d054fa9d9d2b578f39a5ba878fb", + "protein_translation": "MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIPLRKDGEMEYEV", + "protein_translation_length": 527, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006833" + ], + [ + "gene_synonym", + "ECK2058" + ], + [ + "gene_synonym", + "EcoGene:EG11361" + ], + [ + "gene_synonym", + "GI:16130004" + ], + [ + "gene_synonym", + "GeneID:946582" + ], + [ + "gene_synonym", + "JW2049" + ], + [ + "gene_synonym", + "NP_416568.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28249" + ], + [ + "gene_synonym", + "asmA" + ], + [ + "gene_synonym", + "b2064" + ], + [ + "gene_synonym", + "yegA" + ] + ], + "dna_sequence": "ATGAGACGATTTCTGACGACGCTGATGATACTCCTGGTCGTGCTGGTGGCCGGGTTATCTGCGTTAGTGTTGCTGGTGAATCCGAATGATTTCCGCGACTATATGGTCAAGCAAGTTGCTGCACGTAGCGGTTATCAATTGCAGCTCGACGGGCCACTGCGTTGGCACGTCTGGCCGCAGCTTAGTATCCTCTCCGGGCGAATGTCTCTCACCGCCCAGGGCGCAAGCCAGCCACTGGTTCGCGCCGACAACATGCGTCTGGACGTGGCGCTTTTACCACTACTGAGTCATCAACTGAGCGTTAAGCAGGTGATGCTAAAAGGGGCAGTGATCCAACTGACGCCGCAGACGGAAGCGGTGCGCAGTGAAGACGCTCCGGTTGCACCGCGCGACAATACCTTGCCGGATCTGTCAGACGATCGCGGATGGTCGTTTGATATATCCAGTCTTAAGGTGGCGGACAGCGTGCTGGTGTTCCAGCATGAAGATGACGAGCAGGTGACAATCCGCAATATTCGCCTGCAAATGGAACAAGATCCCCAACATCGTGGTTCATTTGAGTTCTCCGGGCGGGTTAATCGCGATCAGCGCGATCTCACGATATCCCTTAACGGTACGGTAGATGCTTCTGATTATCCGCATGATTTAACGGCGGCTATTGAACAAATTAACTGGCAGTTGCAGGGTGCCGATTTACCAAAACAAGGTATTCAGGGGCAGGGGAGTTTCCAGGCCCAGTGGCAGGAGTCACATAAACGCCTTTCATTTAACCAAATTAGTTTGACCGCCAATGATAGTACGCTAAGCGGGCAAGCACAGGTTACGCTGACAGAGAAACCGGAATGGCAGCTGAGGCTGCAATTCCCGCAACTGAATCTTGACAACCTCATCCCGCTTAATGAAACCGCGAATGGTGAAAACGGTGCCGCGCAGCAGGGGCAGAGCCAATCAACGTTGCCGCGCCCGGTCATTTCTTCGCGTATTGATGAACCGGCCTATCAGGGACTGCAAGGCTTTACGGCTGATATTTTGTTGCAGGCCAGTAACGTGCGCTGGCGCGGAATGAATTTTACAGATGTTGCCACGCAAATGACCAACAAGTCGGGTTTGCTGGAAATTACTCAACTGCAGGGCAAACTTAACGGTGGACAGGTTTCACTGCCGGGCACGCTGGACGCGACATCAATAAATCCGCGGATAAACTTCCAGCCACGGCTGGAAAACGTTGAGATTGGTACCATTCTGAAGGCGTTTAACTATCCGATTTCGTTGACCGGAAAAATGTCACTGGCTGGTGATTTCTCCGGTGCTGACATAGATGCCGACGCATTCCGCCACAACTGGCAAGGACAGGCACATGTCGAAATGACCGACACGCGCATGGAAGGGATGAACTTCCAGCAGATGATTCAGCAAGCGGTAGAGCGTAATGGCGGTGATGTGAAGGCCGCTGAAAACTTTGATAACGTGACGCGGCTTGACCGCTTTACCACCGATTTGACGTTGAAGGATGGCGTCGTGACGTTAAACGACATGCAAGGTCAATCGCCTGTGCTGGCGCTGACAGGGGAAGGCATGTTGAATCTGGCAGATCAAACCTGCGACACCCAGTTTGATATTCGGGTCGTGGGTGGCTGGAACGGGGAAAGCAAACTGATTGATTTCCTGAAAGAAACGCCAGTACCGCTGCGGGTTTATGGCAACTGGCAGCAACTCAATTACAGCCTGCAAGTGGATCAGTTACTGCGCAAACATCTACAGGACGAAGCGAAACGTCGCCTGAATGACTGGGCCGAGCGGAATAAAGATTCCCGTAATGGCAAAGATGTGAAGAAGTTGCTGGAGAAGATGTAG", + "dna_sequence_length": 1854, + "functions": [ + "suppressor of OmpF assembly mutants", + "putative outer membrane protein assembly factor", + "inner membrane-anchored periplasmic protein" + ], + "id": "CDS_2049", + "location": [ + [ + "NC_000913", + 2141612, + "-", + 1854 + ] + ], + "md5": "f21c535366089927dd04e1ad93603736", + "parent_gene": "", + "protein_md5": "e7b76eb58f4406287f72f3e601714f80", + "protein_translation": "MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM", + "protein_translation_length": 617, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006835" + ], + [ + "gene_synonym", + "ECK2059" + ], + [ + "gene_synonym", + "EcoGene:EG11418" + ], + [ + "gene_synonym", + "GI:16130005" + ], + [ + "gene_synonym", + "GeneID:946593" + ], + [ + "gene_synonym", + "JW2050" + ], + [ + "gene_synonym", + "NP_416569.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28248" + ], + [ + "gene_synonym", + "b2065" + ], + [ + "gene_synonym", + "dcd" + ], + [ + "gene_synonym", + "dus" + ], + [ + "gene_synonym", + "paxA" + ] + ], + "dna_sequence": "ATGCGTCTGTGTGACCGAGATATTGAAGCCTGGCTTGATGAAGGCCGTTTGTCGATCAACCCACGTCCGCCAGTGGAGCGTATTAACGGCGCGACGGTGGATGTACGCCTGGGCAATAAATTTCGTACCTTCCGTGGTCACACGGCAGCGTTTATCGATCTGAGCGGTCCCAAAGATGAAGTGAGCGCCGCGCTTGACCGCGTGATGAGCGATGAGATCGTTCTCGACGAGGGCGAGGCGTTCTATCTTCACCCAGGAGAGCTGGCGCTGGCGGTGACGCTGGAGTCGGTGACGCTGCCAGCCGATCTGGTGGGCTGGCTGGACGGGCGTTCCTCACTGGCGCGTCTGGGGCTGATGGTGCACGTCACCGCGCACCGCATCGATCCGGGCTGGTCTGGTTGCATTGTGCTGGAGTTCTACAACTCCGGTAAGCTGCCGCTGGCGCTGCGTCCGGGCATGTTAATTGGTGCGCTGAGCTTTGAGCCGCTTTCCGGCCCGGCGGTGCGACCTTACAACCGCCGTGAAGATGCGAAATATCGCAACCAGCAGGGCGCGGTAGCCAGCCGAATCGATAAAGACTAA", + "dna_sequence_length": 582, + "functions": [ + "deoxycytidine triphosphate deaminase", + "dCTP deaminase" + ], + "id": "CDS_2050", + "location": [ + [ + "NC_000913", + 2142215, + "-", + 582 + ] + ], + "md5": "bf30b426a84a905eefe1f7530f144a6f", + "parent_gene": "", + "protein_md5": "8a301baeeee3e6cfdcba5b42bf1de626", + "protein_translation": "MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006840" + ], + [ + "gene_synonym", + "ECK2060" + ], + [ + "gene_synonym", + "EcoGene:EG11701" + ], + [ + "gene_synonym", + "GI:90111379" + ], + [ + "gene_synonym", + "GeneID:946597" + ], + [ + "gene_synonym", + "JW2051" + ], + [ + "gene_synonym", + "NP_416570.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8F4" + ], + [ + "gene_synonym", + "b2066" + ], + [ + "gene_synonym", + "udk" + ] + ], + "dna_sequence": "ATGACTGATCAGTCTCATCAGTGCGTCATTATCGGTATCGCTGGCGCATCGGCTTCCGGCAAGAGTCTTATTGCCAGTACCCTTTATCGTGAATTGCGTGAGCAAGTCGGTGATGAACACATCGGCGTAATTCCCGAAGACTGCTATTACAAAGATCAAAGCCATCTGTCGATGGAAGAACGCGTTAAGACCAACTACGACCATCCCAGCGCGATGGATCACAGTCTGCTGCTTGAGCATTTACAAGCGTTGAAACGCGGCTCGGCAATTGACCTGCCGGTTTACAGCTATGTTGAACATACGCGTATGAAAGAAACGGTGACGGTTGAGCCGAAGAAGGTCATCATTCTCGAAGGCATTTTGTTGCTGACGGATGCGCGTTTGCGTGACGAACTTAACTTCTCCATTTTCGTTGATACCCCGCTGGATATCTGCCTGATGCGCCGCATCAAGCGTGACGTTAACGAGCGTGGGCGTTCAATGGATTCAGTGATGGCGCAATATCAAAAAACCGTGCGCCCGATGTTCCTGCAATTCATTGAGCCTTCTAAACAATATGCGGACATTATCGTGCCGCGCGGCGGGAAAAACCGCATCGCGATCGATATATTGAAAGCGAAAATAAGTCAGTTCTTTGAATAA", + "dna_sequence_length": 642, + "functions": [ + "uridine/cytidine kinase" + ], + "id": "CDS_2051", + "location": [ + [ + "NC_000913", + 2142948, + "-", + 642 + ] + ], + "md5": "353b84c8fdccba52a0bcafd4d8b13a73", + "parent_gene": "", + "protein_md5": "4ed5676e1b1bfa82b39a8a407f81fffd", + "protein_translation": "MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006845" + ], + [ + "gene_synonym", + "ECK2061" + ], + [ + "gene_synonym", + "EcoGene:EG12396" + ], + [ + "gene_synonym", + "GI:16130007" + ], + [ + "gene_synonym", + "GeneID:946600" + ], + [ + "gene_synonym", + "JW2052" + ], + [ + "gene_synonym", + "NP_416571.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38097" + ], + [ + "gene_synonym", + "b2067" + ], + [ + "gene_synonym", + "yegE" + ] + ], + "dna_sequence": "ATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCAGTTTAGGTTTAGTCTCGTTTATCTTTACCCTTTTCTCGCTTGAGCTTTCGCAGTTTGGCACCCAACTCGCCCCACTGTGGTTCCCGACGTCCATCATGATGGTGGCGTTTTATCGCCATGCCGGGCGCATGTGGCCGGGAATTGCGCTGAGCTGTTCGCTGGGAAATATCGCCGCATCCATCCTGCTTTTTTCCACCAGCTCGCTGAACATGACCTGGACGACCATCAATATTGTTGAAGCCGTGGTCGGGGCAGTGCTGCTACGTAAATTGCTGCCGTGGTATAACCCCTTGCAAAATCTGGCTGACTGGCTGCGTCTGGCACTCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCTGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTACTTTCATTATTGTGCTGTTGATGTGGAGCGCCGTGCGTCTGCCACGAATGGAAGCCTTTTTGATCTTCCTTACCACGGTGATGATGGTGTCGCTGATGATGGCCGCGGATCCCTCCCTGCTTGCTACGCCGCGTACGTACCTGATGAGCCATATGCCGTGGCTACCGTTTTTGCTGATCCTGCTGCCCGCCAACATCATGACCATGGTGATGTATGCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGTTAGTGGGCACCGAGGGACAATGGCTGCAAACCAACAAAGCGCTCTGCCAGTTTCTCGGGTACAGTCAGGAAGAGCTGCGCGGACTCACCTTTCAGCAACTGACCTGGCCGGAGGATCTCAATAAAGATCTCCAACAGGTTGAAAAGCTGATAAGCGGTGAAATAAACACCTATTCAATGGAAAAACGCTACTACAACCGCAATGGCGATGTTGTCTGGGCGTTGCTTGCCGTCTCACTGGTGCGCCACACGGATGGCACGCCGCTCTATTTTATCGCTCAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGTACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAAGTGATTCGTGATTCGTTGCAATCACGCTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGTTGCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCAGGACGTTACCGAATCACGCAAAATGCTGCGCCAGCTGAGCTACAGCGCCTCCCATGATGCACTGACGCATCTCGCCAACCGCGCCAGTTTTGAGAAACAACTGCGTATCCTGCTGCAAACGGTAAACAGTACACATCAGCGACATGCCCTGGTGTTTATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCTGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAGCGCGCGTTTTATCGCTACACGCATTATCAGTGCCGTGAATGACTATCACTTTATATGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACAGTGGCGGATGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCACGGATCCCGGAAGCGCGTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGCGAGATTATTGATGAACAAACATTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCATCTCCCTCCCCCTTTCCGTTGCCGGTTTGAGTAGCGCCACGCTGGTGAATGATCTGCTTGAGCAGCTGGAAAATAGCCCTCTACCACCACGGTTATTACATCTGATTATTCCGGCTGAAGCGATTTTAGATCACGCAGAAAGCGTGCAAAAACTGCGGCTGGCGGGATGTCGGATAGTGCTCAGCCAGGTGGGCCGCGATCTGCAAATCTTCAACTCGCTGAAAGCGAATATGGCAGATTACCTGCTACTTGATGGTGAGTTATGCGCCAACGTGCAGGGTAATTTGATGGATGAGATGCTGATTACGATTATTCAGGGGCACGCTCAGCGACTCGGGATGAAAACCATCGCCGGGCCAGTCGTTTTACCCTTAGTGATGGATACGCTTTCTGGCATCGGCGTCGATCTGATTTATGGTGAGGTGATTGCCGATGCCCAACCGCTGGATTTGCTGGTGAATAGTAGTTATTTCGCGATTAACTGA", + "dna_sequence_length": 3318, + "functions": [ + "putative diguanylate cyclase" + ], + "id": "CDS_2052", + "location": [ + [ + "NC_000913", + 2143266, + "+", + 3318 + ] + ], + "md5": "81815025df1c65914908bfd3b83f2282", + "parent_gene": "", + "protein_md5": "40b4eda7b2f47553c6a1291968c00527", + "protein_translation": "MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN", + "protein_translation_length": 1105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006848" + ], + [ + "gene_synonym", + "ECK2062" + ], + [ + "gene_synonym", + "EcoGene:EG11222" + ], + [ + "gene_synonym", + "GI:16130008" + ], + [ + "gene_synonym", + "GeneID:947371" + ], + [ + "gene_synonym", + "JW2053" + ], + [ + "gene_synonym", + "NP_416572.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04395" + ], + [ + "gene_synonym", + "aidA" + ], + [ + "gene_synonym", + "alkA" + ], + [ + "gene_synonym", + "b2068" + ] + ], + "dna_sequence": "ATGTATACCCTGAACTGGCAGCCGCCGTATGACTGGTCGTGGATGTTGGGATTTCTCGCCGCCCGTGCGGTGAGCAGTGTGGAAACGGTCGCGGACAGTTATTATGCCCGTAGTCTGGCGGTGGGCGAATATCGCGGCGTGGTGACTGCTATTCCGGATATAGCCCGCCATACTCTGCACATAAATTTAAGTGCAGGTTTAGAACCTGTTGCCGCAGAGTGTCTGGCGAAAATGAGCCGCCTGTTTGATCTGCAATGTAACCCACAAATTGTTAACGGTGCGTTGGGCAGGTTAGGCGCGGCGCGGCCCGGATTGCGTTTACCCGGCTGTGTTGATGCTTTTGAGCAGGGCGTGCGGGCGATTTTAGGCCAACTGGTGAGCGTGGCGATGGCGGCAAAATTGACCGCCAGAGTGGCACAGCTTTATGGCGAACGGCTGGATGATTTTCCGGAGTATATCTGCTTCCCGACGCCTCAGCGGCTGGCAGCAGCAGACCCGCAGGCATTAAAAGCGTTAGGTATGCCGTTGAAACGGGCAGAGGCGCTGATTCATCTGGCAAATGCGGCGCTGGAGGGCACCTTACCAATGACAATACCGGGCGATGTGGAGCAGGCGATGAAAACGCTGCAAACTTTTCCGGGTATCGGGCGCTGGACGGCGAATTATTTTGCTTTGCGTGGCTGGCAGGCGAAAGATGTTTTCCTGCCGGATGATTATCTGATTAAACAGCGATTTCCGGGAATGACACCGGCGCAAATCCGCCGTTATGCCGAGCGCTGGAAGCCCTGGCGTTCTTATGCGCTGTTGCATATCTGGTATACGGAAGGCTGGCAACCAGACGAAGCATGA", + "dna_sequence_length": 849, + "functions": [ + "3-methyl-adenine DNA glycosylase II" + ], + "id": "CDS_2053", + "location": [ + [ + "NC_000913", + 2147540, + "-", + 849 + ] + ], + "md5": "b911ef381b62ab94a73dcb148398e593", + "parent_gene": "", + "protein_md5": "3c91311e90e18c90f19322863839383f", + "protein_translation": "MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006856" + ], + [ + "gene_synonym", + "ECK2063" + ], + [ + "gene_synonym", + "EcoGene:EG12200" + ], + [ + "gene_synonym", + "GI:90111380" + ], + [ + "gene_synonym", + "GeneID:947234" + ], + [ + "gene_synonym", + "JW2054" + ], + [ + "gene_synonym", + "NP_416573.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36928" + ], + [ + "gene_synonym", + "b2069" + ], + [ + "gene_synonym", + "yegD" + ] + ], + "dna_sequence": "GTGTTTATTGGTTTTGATTACGGTACAGCAAACTGTTCAGTGGCGGTCATGCGTGACGGTAAACCGCATTTGCTAAAAATGGAAAACGACAGCACGCTGCTGCCTTCAATGCTTTGCGCGCCAACGCGTGAAGCGGTAAGCGAATGGCTGTACCGCCATCATGATGTTCCGGCAGACGACGATGAAACGCAGGCGCTGTTACGTCGGGCGATTCGTTATAACCGCGAAGAAGATATCGATGTTACGGCGAAAAGCGTGCAGTTCGGTCTTTCCTCACTGGCACAGTACATTGATGATCCAGAAGAAGTGTGGTTTGTGAAATCACCAAAATCGTTCCTCGGTGCCAGCGGCTTAAAACCGCAGCAGGTAGCGCTGTTTGAGGATCTGGTCTGCGCAATGATGTTGCACATTCGCCAGCAGGCGCAGGCACAGCTGCCAGAAGCGATTACTCAGGCGGTGATTGGTCGTCCGATCAACTTCCAGGGGCTGGGCGGTGATGAAGCAAACACCCAGGCGCAAGGGATTCTGGAACGCGCGGCGAAGCGTGCCGGATTCAGGGACGTGGTATTCCAGTACGAGCCGGTCGCGGCTGGGCTGGATTACGAAGCCACCTTGCAGGAAGAAAAACGGGTGCTGGTGGTGGATATCGGCGGTGGTACGACTGACTGTTCATTGCTGCTGATGGGGCCGCAGTGGCGTTCGCGTCTCGATCGTGAAGCCAGCCTGCTGGGTCACAGTGGTTGCCGTATTGGCGGTAACGATCTGGATATCGCGCTGGCGTTTAAAAACCTGATGCCACTGCTGGGTATGGGTGGCGAAACCGAAAAAGGCATCGCCCTGCCGATCCTGCCGTGGTGGAATGCGGTTGCCATCAACGACGTACCTGCGCAGAGTGATTTCTACAGTAGTGCCAACGGTCGTCTGCTTAACGATCTGGTACGCGATGCCCGCGAACCGGAAAAAGTGGCCCTGTTACAGAAAGTCTGGCGTCAGCGTTTAAGCTATCGCCTGGTGCGTAGCGCAGAAGAGTGCAAAATTGCTCTTTCAAGCGTAGCGGAAACCCGCGCCTCACTGCCGTTTATCAGCAATGAACTGGCTACGCTGATTAGCCAGCGAGGGCTGGAAAGCGCCCTCAGCCAGCCACTGACGCGGATTCTGGAACAGGTGCAACTGGCCCTGGATAACGCCCAGGAAAAACCGGACGTTATCTACCTGACCGGCGGTAGCGCCCGTTCTCCGCTGATTAAAAAAGCGCTGGCAGAACAGTTGCCGGGCATTCCGATTGCAGGCGGCGATGACTTTGGCTCCGTCACCGCCGGGCTGGCACGCTGGGCGGAAGTGGTGTTTCGTTAA", + "dna_sequence_length": 1353, + "functions": [ + "Hsp70 chaperone family protein" + ], + "id": "CDS_2054", + "location": [ + [ + "NC_000913", + 2147674, + "+", + 1353 + ] + ], + "md5": "95b8dba97d49d1c2c5b2218938760d30", + "parent_gene": "", + "protein_md5": "e801b53a18c7836a3462b201c1e4a71e", + "protein_translation": "MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006858" + ], + [ + "gene_synonym", + "ECK2064" + ], + [ + "gene_synonym", + "EcoGene:EG14052" + ], + [ + "gene_synonym", + "GI:16130010" + ], + [ + "gene_synonym", + "GeneID:947159" + ], + [ + "gene_synonym", + "JW2055" + ], + [ + "gene_synonym", + "NP_416574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76393" + ], + [ + "gene_synonym", + "b2070" + ], + [ + "gene_synonym", + "yegI" + ] + ], + "dna_sequence": "ATGAAAACAAATATAAAAGTATTTACATCGACAGGTGAATTGACCACTCTTGGCCGTGAACTGGGCAAAGGTGGTGAAGGCGCGGTTTATGATATCGAGGAGTTTGTCGATAGCGTCGCCAAGATTTATCACACGCCGCCACCCGCCTTAAAACAGGACAAACTTGCCTTTATGGCTGCGACAGCTGACGCGCAGTTGTTGAATTATGTCGCCTGGCCGCAGGCAACGCTTCACGGTGGACGAGGCGGAAAAGTTATCGGTTTTATGATGCCAAAAGTTTCTGGTAAAGAACCGATTCATATGATCTATAGCCCGGCACATCGTCGCCAGAGTTACCCTCATTGTGCGTGGGATTTTCTACTCTATGTTGCGCGCAATATTGCTTCATCTTTTGCTACGGTTCACGAGCACGGGCACGTCGTGGGTGACGTAAACCAGAACAGTTTTATGGTAGGTCGCGACAGCAAAGTGGTACTGATTGATAGCGACTCCTTTCAAATTAACGCCAATGGCACACTGCATTTATGCGAAGTCGGCGTGTCGCATTTTACGCCGCCAGAGCTACAAACCTTGCCATCATTTGTCGGTTTTGAACGCACAGAAAATCACGATAATTTTGGCCTTGCGTTGCTAATTTTTCACGTCTTGTTTGGTGGGCGGCATCCTTATTCTGGTGTGCCGCTTATCTCTGATGCGGGTAATGCGCTGGAGACGGATATTACCCATTTCCGTTATGCCTACGCGTCAGATAATCAGCGACGTGGTTTAAAACCGCCGCCACGATCTATTCCGCTATCGATGTTACCGAGTGATGTTGAAGCCATGTTTCAGCAGGCATTCACGGAAAGTGGCGTGGCAACCGGGCGTCCGACGGCTAAAGCGTGGGTAGCGGCACTGGACTCTCTACGCCAACAGTTAAAGAAATGTATCGTTTCAGCAATGCATGTTTACCCCGCTCATTTGACTGACTGCCCGTGGTGTGCGCTGGATAATCAAGGTGTTATCTATTTTATTGATCTCGGCGAAGAGGTCATTACCACCGGCGGGAATTTTGTGCTGGCGAAAGTCTGGGCGATGGTGATGGCGTCAGTAGCACCGCCAGCATTGCAACTGCCATTACCCGATCATTTCCAACCGACTGGCAGGCCGCTTCCTTTAGGCCTGTTACGGCGCGAATACATCATTCTGCTTGAGATCGCACTGTCAGCATTATCGCTGCTGCTTTGCGGCCTTCAGGCAGAACCGCGTTATATTATTTTGGTTCCTGTGCTGGCGGCTATCTGGATTATTGGCAGTCTGACAAGCAAAGCGTACAAAGCAGAAGTTCAGCAACGCCGTGAGGCATTTAATCGTGCGAAAATGGACTATGACCATTTAGTCCGCCAGATCCAGCAGGTAGGCGGCCTGGAAGGTTTTATCGCCAAACGGACGATGCTCGAAAAAATGAAGGACGAAATTCTCGGGTTACCGGAAGAAGAGAAACGCGCTCTGGCAGCACTTCATGACACTGCAAGGGAACGGCAGAAGCAGAAGTTTCTGGAGGGATTTTTTATTGATGTTGCCTCTATTCCCGGCGTTGGCCCTGCGCGTAAAGCGGCGTTACGGTCTTTTGGTATTGAAACAGCCGCAGATGTTACCCGTCGTGGCGTTAAGCAAGTGAAAGGGTTTGGCGACCATCTGACCCAGGCGGTTATCGACTGGAAAGCGAGCTGTGAACGCCGTTTTGTGTTCAGGCCGAATGAAGCGATAACGCCAGCAGACAGACAAGCGGTAATGGCGAAAATGACCGCCAAACGACATCGGCTGGAATCGGCGTTGACAGTCGGCGCGACAGAGTTGCAGCGATTCCGCCTTCATGCTCCAGCACGGACCATGCCGTTGATGGAACCGTTACGTCAGGCAGCAGAAAAACTGGCTCAGGCGCAGGCAGATTTAAGCCGCTGCTGA", + "dna_sequence_length": 1947, + "functions": [ + "protein kinase-related putative non-specific DNA-binding protein" + ], + "id": "CDS_2055", + "location": [ + [ + "NC_000913", + 2150985, + "-", + 1947 + ] + ], + "md5": "ccd62e468a246d529413035441462102", + "parent_gene": "", + "protein_md5": "1258d53d53716af93f43b0ee5ace03cd", + "protein_translation": "MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC", + "protein_translation_length": 648, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006863" + ], + [ + "gene_synonym", + "ECK2065" + ], + [ + "gene_synonym", + "EcoGene:EG14053" + ], + [ + "gene_synonym", + "GI:16130011" + ], + [ + "gene_synonym", + "GeneID:947201" + ], + [ + "gene_synonym", + "JW2056" + ], + [ + "gene_synonym", + "NP_416575.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76394" + ], + [ + "gene_synonym", + "b2071" + ], + [ + "gene_synonym", + "yegJ" + ] + ], + "dna_sequence": "ATGAAAAAGATATTACTTATGTTGAGTCTGCTATTTTTTACTACCGCGGGCTTTAGTGAAGTTTCGGATACGTTAGTGACGGGAGGTTATGATAAACAAGCGATGTCTGACGCGATTAAACATGCGCGGAAAGAAACCGATAAATTCATCGAGGTTATGAATAAAAAAGATGCCGATACTTTCGCAGTCAAAGCCCCGATAACCGATCACGGAAGAACCGAGCATTTCTGGCTTACGGATGTCACTTATTCTAACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAA", + "dna_sequence_length": 462, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2056", + "location": [ + [ + "NC_000913", + 2151185, + "+", + 462 + ] + ], + "md5": "1018bde5bccf4ef99069441836d9f8f2", + "parent_gene": "", + "protein_md5": "46a93d64cffcd850934b14e69b2d5f30", + "protein_translation": "MKKILLMLSLLFFTTAGFSEVSDTLVTGGYDKQAMSDAIKHARKETDKFIEVMNKKDADTFAVKAPITDHGRTEHFWLTDVTYSNGMFIGVISNDPGIVTNVEYGQEWKIKKEDISDWMYTRGDKIYGGYTIDPLLVTYPKEEADELRAKLVR", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006865" + ], + [ + "gene_synonym", + "ECK2066" + ], + [ + "gene_synonym", + "EcoGene:EG14054" + ], + [ + "gene_synonym", + "GI:16130012" + ], + [ + "gene_synonym", + "GeneID:947269" + ], + [ + "gene_synonym", + "JW2057" + ], + [ + "gene_synonym", + "NP_416576.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76395" + ], + [ + "gene_synonym", + "b2072" + ], + [ + "gene_synonym", + "yegK" + ] + ], + "dna_sequence": "GTGAGCTGGCGTCTGGTCTATGCATCAACCGTTGGAACGTCGCACATCAGCGCGGACTTGCCTTGTCAGGATGCCTGCCAGATGCAGATTGCCTGGTTAAATGACCAGCAGCCATTATTGTCGGTATTTGTCGCTGATGGCGCAGGCAGTGTCTCGCAGGGTGGCGAAGGCGCGATGCTCGCCGTCAATGAAGCGATGGCTTATATGTCGCAAAAAGTGCAGGGCGGGGAATTGGGGCTTAATGATGTCCTCGCCACAAATATGGTACTGACCATTCGTCAACGACTTTTTGCCGAGGCGGAAGCCAAAGAATTAGCGGTTCGCGATTTTGCCTGCACATTTCTGGGACTGATTTCATCGCCTGACGGCACCTTGATTATGCAGATTGGCGATGGCGGCGTGGTGGTAGATTTGGGTCACGGTCTGCAATTGCCTCTCACGCCGATGGCGGGTGAATATGCCAACATGACGCACTTCATTACCGACGAAGATGCCGTTTCCAGACTGGAAACTTTCACCAGCACTGGGCGTGCGCACAAAGTTGCAGCATTTACGGATGGTATCCAGCGACTGGCGTTAAATATGCTGGATAATTCTCCTCATGTGCCTTTCTTTACCCCGTTTTTCAATGGACTGGCGGCAGCAACGCAGGAACAACTCGATTTATTACCTGAATTGTTAAAGCAGTTTTTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGA", + "dna_sequence_length": 762, + "functions": [ + "ser/thr phosphatase-related protein" + ], + "id": "CDS_2057", + "location": [ + [ + "NC_000913", + 2152472, + "-", + 762 + ] + ], + "md5": "2c222aa7c62ae8fb1eb1fcf6d044338f", + "parent_gene": "", + "protein_md5": "2907c15901946981c6f735f5e7a25099", + "protein_translation": "MSWRLVYASTVGTSHISADLPCQDACQMQIAWLNDQQPLLSVFVADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLNDVLATNMVLTIRQRLFAEAEAKELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMAGEYANMTHFITDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLAAATQEQLDLLPELLKQFLSSPAVNERTDDDKTLALALWAE", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006867" + ], + [ + "gene_synonym", + "ECK2067" + ], + [ + "gene_synonym", + "EcoGene:EG14055" + ], + [ + "gene_synonym", + "GI:16130013" + ], + [ + "gene_synonym", + "GeneID:946602" + ], + [ + "gene_synonym", + "JW2058" + ], + [ + "gene_synonym", + "NP_416577.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76396" + ], + [ + "gene_synonym", + "b2073" + ], + [ + "gene_synonym", + "yegL" + ] + ], + "dna_sequence": "ATGAGCGAACAAATCACGTTTGCCACCAGCGATTTTGCCAGTAACCCGGAACCACGTTGCCCCTGCATTTTGCTGCTGGATGTTTCTGGTTCTATGAACGGTAGACCTATTAATGAACTTAACGCCGGATTGGTTACCTTTCGTGATGAACTGCTTGCTGATCCGCTGGCTTTAAAAAGAGTGGAACTCGGCATTGTGACGTTCGGCCCGGTGCATGTGGAACAACCCTTTACCAGCGCCGCTAATTTTTTTCCGCCCATCCTGTTTGCCCAGGGCGATACACCAATGGGTGCGGCCATTACCAAAGCCCTGGATATGGTAGAGGAGCGGAAACGTGAGTATCGTGCAAATGGTATTTCGTATTATCGCCCGTGGATTTTCCTGATTACCGATGGTGCACCAACCGATGAGTGGCAGGCTGCAGCCAACAAAGTGTTTCGGGGGGAAGAAGATAAAAGGTTTGCTTTCTTTTCCATCGGTGTTCAGGGGGCGGATATGAAGACGCTGGCACAAATTAGCGTTCGTCAGCCTTTGCCTCTGCAAGGATTACAATTCCGTGAACTGTTTAGCTGGTTATCCAGTTCGCTGCGTTCGGTTTCCCGCTCCACGCCGGGAACGGAAGTTGTGCTGGAAGCGCCAAAAGGCTGGACGTCAGTGTGA", + "dna_sequence_length": 660, + "functions": [ + "VMA domain protein" + ], + "id": "CDS_2058", + "location": [ + [ + "NC_000913", + 2153128, + "-", + 660 + ] + ], + "md5": "88c64cc24a021731188670cfaf30123e", + "parent_gene": "", + "protein_md5": "7f9153abb5309cb8bb3c4cc5b812f876", + "protein_translation": "MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIGVQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4482" + ], + [ + "gene_synonym", + "EcoGene:EG14472" + ], + [ + "gene_synonym", + "GI:226524729" + ], + [ + "gene_synonym", + "GeneID:7751625" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P607" + ], + [ + "gene_synonym", + "YP_002791247.1" + ], + [ + "gene_synonym", + "b4667" + ], + [ + "gene_synonym", + "ibsA" + ] + ], + "dna_sequence": "ATGATGAAGCACGTCATCATACTGGTGATACTCTTAGTGATTAGCTTCCAGGCTTACTAA", + "dna_sequence_length": 60, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_2059", + "location": [ + [ + "NC_000913", + 2153408, + "-", + 60 + ] + ], + "md5": "a991fbee63088c9b5ab078f3f37aa0cb", + "parent_gene": "", + "protein_md5": "efda09d57f23a8060f054faea176517c", + "protein_translation": "MMKHVIILVILLVISFQAY", + "protein_translation_length": 19, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4483" + ], + [ + "gene_synonym", + "EcoGene:EG14473" + ], + [ + "gene_synonym", + "GI:226524730" + ], + [ + "gene_synonym", + "GeneID:7751626" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P608" + ], + [ + "gene_synonym", + "YP_002791248.1" + ], + [ + "gene_synonym", + "b4668" + ], + [ + "gene_synonym", + "ibsB" + ] + ], + "dna_sequence": "ATGATGAAGCTACTCATCATCGTGGTGCTCTTAGTCATAAGCTTCCCCGCTTACTAA", + "dna_sequence_length": 57, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_2060", + "location": [ + [ + "NC_000913", + 2153737, + "-", + 57 + ] + ], + "md5": "47abdd2c4e5826a86ec5aeb2e1357bcd", + "parent_gene": "", + "protein_md5": "c72d4b5e79a7c8912e8be1d8d0c9c74e", + "protein_translation": "MMKLLIIVVLLVISFPAY", + "protein_translation_length": 18, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006872" + ], + [ + "gene_synonym", + "ECK2070" + ], + [ + "gene_synonym", + "EcoGene:EG14056" + ], + [ + "gene_synonym", + "GI:90111381" + ], + [ + "gene_synonym", + "GeneID:946604" + ], + [ + "gene_synonym", + "JW5338" + ], + [ + "gene_synonym", + "NP_416578.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76397" + ], + [ + "gene_synonym", + "b2074" + ], + [ + "gene_synonym", + "mdtA" + ], + [ + "gene_synonym", + "yegM" + ] + ], + "dna_sequence": "ATGAAAGGTAGTTATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCCCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGACCGCCGTAGAACAGGCAGTTCCGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATTTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGCCAACTGGCAAAAGATAAAGCCACGCTTGCCAACGCCCGCCGTGACCTGGCGCGTTATCAACAACTGGCAAAAACCAATCTCGTTTCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAACGCGCGCATGTTAGTCGACACCGAACAAAACGCCGTAGTGATCCCAACAGCCGCCCTGCAAATGGGCAATGAAGGCCATTTTGTCTGGGTGCTGAATAGCGAAAACAAGGTCAGCAAACATCTGGTGACGCCGGGCATTCAGGACAGTCAGAAAGTGGTGATCCGTGCAGGTATTTCTGCGGGCGATCGCGTGGTGACAGACGGCATTGATCGCCTGACCGAAGGGGCGAAAGTGGAAGTGGTGGAAGCCCAGAGCGCCACTACTCCGGAAGAGAAAGCCACCAGCCGCGAATACGCGAAAAAAGGAGCACGCTCCTGA", + "dna_sequence_length": 1248, + "functions": [ + "multidrug efflux system, subunit A" + ], + "id": "CDS_2061", + "location": [ + [ + "NC_000913", + 2154016, + "+", + 1248 + ] + ], + "md5": "0a7df7c50ffe31212aabfffe6fd662f6", + "parent_gene": "", + "protein_md5": "adfe3857509e4ab9ab5809976226eb19", + "protein_translation": "MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006874" + ], + [ + "gene_synonym", + "ECK2071" + ], + [ + "gene_synonym", + "EcoGene:EG14057" + ], + [ + "gene_synonym", + "GI:16130015" + ], + [ + "gene_synonym", + "GeneID:946606" + ], + [ + "gene_synonym", + "JW2060" + ], + [ + "gene_synonym", + "NP_416579.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76398" + ], + [ + "gene_synonym", + "b2075" + ], + [ + "gene_synonym", + "mdtB" + ], + [ + "gene_synonym", + "yegN" + ] + ], + "dna_sequence": "ATGCAGGTGTTACCCCCGAGCAGCACAGGCGGCCCGTCGCGCCTGTTTATTATGCGTCCTGTGGCCACCACGCTGCTGATGGTGGCGATCTTACTCGCCGGGATTATCGGTTATCGCGCCCTGCCCGTTTCGGCGCTGCCGGAAGTGGACTATCCGACCATTCAGGTGGTCACGCTCTACCCAGGTGCCAGCCCGGATGTCATGACCTCTGCCGTTACCGCGCCGCTAGAACGCCAGTTCGGGCAGATGTCTGGCCTGAAACAGATGTCGTCGCAAAGTTCCGGCGGTGCGTCAGTTATCACTTTGCAGTTCCAGCTAACATTACCGCTCGATGTCGCCGAGCAGGAAGTGCAGGCCGCGATTAACGCTGCGACCAACTTGTTGCCGAGCGATCTGCCTAACCCGCCGGTTTACAGCAAAGTGAACCCGGCAGATCCGCCGATCATGACGCTCGCCGTCACCTCAACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAATCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAGAACAGGCCATTGTGATGAATGTTCAGCGCCAGCCCGGTGCTAACATTATCTCCACCGCCGACAGCATTCGGCAGATGCTGCCACAGCTCACTGAGAGTCTGCCGAAATCGGTGAAGGTGACAGTGCTTTCCGATCGCACCACCAATATCCGCGCATCCGTCGATGATACTCAGTTTGAATTGATGATGGCTATCGCGCTGGTAGTCATGATTATCTACCTGTTTTTGCGCAATATTCCGGCGACCATCATTCCCGGTGTTGCTGTACCGCTGTCGTTAATCGGCACTTTCGCGGTTATGGTGTTTCTCGATTTTTCAATCAATAACCTGACACTGATGGCGTTAACTATCGCCACCGGATTCGTGGTCGATGACGCCATCGTGGTGATCGAAAACATTTCCCGCTATATCGAAAAAGGCGAAAAACCGTTGGCGGCGGCGCTCAAGGGCGCAGGTGAAATCGGCTTTACCATTATCTCGCTGACCTTCTCACTGATTGCGGTGTTGATCCCACTGCTGTTTATGGGCGATATCGTCGGGCGACTGTTCCGCGAATTTGCTATTACCCTGGCGGTAGCGATTTTGATCTCAGCGGTGGTGTCGCTGACCCTGACACCGATGATGTGCGCGCGGATGCTCAGCCAGGAGTCGTTGCGTAAACAGAACCGCTTCTCCCGTGCCTCGGAAAAAATGTTCGACAGGATAATCGCCGCCTATGGTCGTGGACTGGCGAAAGTGCTGAATCATCCGTGGCTGACCTTAAGCGTGGCACTCAGCACGCTGCTGCTTAGCGTGCTGCTGTGGGTGTTCATTCCGAAAGGTTTCTTCCCGGTACAGGACAATGGCATTATTCAGGGCACTTTGCAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCGGGTGCAAAAAGTCATCGCCCGTCTGCAAACGGCGGTAGATAAAGTGCCGGGCGTCGATCTCTTCCTGCAACCAACGCAGGATCTGACTATTGATACTCAGGTCAGCCGCACCCAGTACCAGTTTACCTTGCAGGCCACGTCACTGGATGCGCTCAGTACCTGGGTGCCACAGTTGATGGAAAAACTCCAGCAACTGCCACAGCTTTCTGATGTCTCCAGCGACTGGCAGGACAAAGGGCTGGTGGCGTATGTCAATGTTGATCGCGACAGCGCCAGCCGTCTGGGGATCAGCATGGCGGATGTCGATAACGCCCTGTACAACGCGTTTGGTCAGCGGCTGATTTCCACTATTTATACTCAGGCCAACCAGTATCGCGTGGTGCTGGAGCACAACACCGAAAATACCCCAGGCCTCGCGGCGCTGGATACCATTCGCCTGACCAGCAGCGACGGCGGCGTGGTGCCGCTAAGCTCAATTGCCAAAATTGAGCAGCGTTTTGCGCCGCTCTCCATCAACCATCTGGATCAGTTCCCGGTAACGACCATCTCCTTTAACGTGCCGGATAACTATTCGCTGGGCGATGCGGTGCAGGCGATTATGGACACCGAAAAGACGCTGAATCTGCCGGTGGATATCACCACGCAGTTCCAGGGCAGCACCCTCGCCTTCCAGTCGGCGCTGGGCAGCACTGTCTGGCTGATTGTCGCGGCGGTGGTGGCGATGTATATCGTGCTCGGCATTCTGTACGAGAGCTTTATTCACCCGATCACCATTCTCTCGACGCTACCCACCGCAGGGGTTGGCGCACTGCTGGCGTTGCTGATTGCTGGTAGCGAACTGGATGTGATTGCGATTATCGGCATTATTTTGCTGATCGGTATCGTGAAGAAGAACGCCATCATGATGATCGACTTCGCGCTGGCTGCTGAGCGCGAGCAAGGCATGTCGCCGCGCGAGGCAATCTACCAGGCTTGTCTGTTGCGTTTTCGTCCGATCCTGATGACCACTCTGGCGGCTCTGCTTGGCGCGCTGCCGCTGATGTTGAGTACCGGGGTCGGCGCGGAACTGCGTCGTCCGTTAGGTATCGGCATGGTCGGCGGTCTGATTGTCAGCCAGGTGCTGACGCTGTTTACCACGCCGGTGATTTATTTGCTGTTCGACCGCCTGGCATTGTGGACCAAAAGCCGCTTTGCCCGTCATGAAGAGGAGGCGTAA", + "dna_sequence_length": 3123, + "functions": [ + "multidrug efflux system, subunit B" + ], + "id": "CDS_2062", + "location": [ + [ + "NC_000913", + 2155263, + "+", + 3123 + ] + ], + "md5": "be7ec4474b7e15776e703a52c13295e3", + "parent_gene": "", + "protein_md5": "7e11e082ac152db516c530026f399b58", + "protein_translation": "MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALLIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTKSRFARHEEEA", + "protein_translation_length": 1040, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006877" + ], + [ + "gene_synonym", + "ECK2072" + ], + [ + "gene_synonym", + "EcoGene:EG14058" + ], + [ + "gene_synonym", + "GI:16130016" + ], + [ + "gene_synonym", + "GeneID:946608" + ], + [ + "gene_synonym", + "JW2061" + ], + [ + "gene_synonym", + "NP_416580.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76399" + ], + [ + "gene_synonym", + "b2076" + ], + [ + "gene_synonym", + "mdtC" + ], + [ + "gene_synonym", + "yegO" + ] + ], + "dna_sequence": "GTGAAGTTTTTTGCCCTCTTCATTTACCGCCCGGTGGCGACGATTTTACTGTCGGTTGCCATTACCCTGTGCGGCATACTGGGCTTCCGTATGCTGCCGGTCGCCCCGCTGCCGCAGGTCGATTTTCCGGTGATTATCGTCAGCGCCTCGCTGCCCGGTGCGTCACCAGAAACAATGGCGTCTTCCGTTGCCACGCCGCTGGAGCGCTCACTTGGGCGCATTGCCGGAGTCAGTGAAATGACCTCCAGCAGTTCGCTCGGCAGCACGCGTATTATTTTGCAGTTTGATTTTGACCGGGATATCAACGGCGCAGCGCGTGATGTGCAGGCGGCGATCAACGCTGCACAAAGTTTGCTGCCCAGTGGGATGCCCAGCCGCCCGACCTATCGCAAAGCGAACCCGTCGGATGCGCCAATTATGATCCTCACGCTGACGTCCGATACTTATTCGCAGGGTGAACTGTACGATTTCGCCTCGACGCAGCTGGCTCCGACGATTTCGCAAATCGACGGTGTTGGTGATGTCGATGTCGGAGGCAGCTCACTGCCCGCCGTACGCGTCGGGCTGAATCCGCAGGCGCTGTTTAATCAGGGCGTGTCGCTGGACGACGTACGCACCGCCGTCAGCAATGCCAACGTGCGTAAACCGCAGGGCGCGCTGGAAGATGGCACTCACCGCTGGCAGATCCAGACCAATGATGAGCTAAAAACCGCCGCTGAATATCAGCCGTTGATTATTCACTACAACAACGGCGGCGCGGTTCGTCTGGGCGATGTGGCGACGGTGACCGACTCAGTGCAGGATGTGCGCAACGCCGGGATGACCAACGCCAAACCGGCTATTTTACTGATGATCCGCAAACTGCCGGAAGCCAATATTATCCAGACGGTTGACAGCATCCGGGCAAAATTACCGGAGTTGCAGGAAACCATTCCGGCGGCGATTGATCTGCAAATTGCCCAGGATCGCTCCCCCACCATTCGCGCCTCGCTGGAAGAAGTCGAGCAAACGCTGATTATCTCGGTGGCGCTGGTGATTCTGGTGGTGTTTTTATTCCTGCGCTCGGGTCGCGCCACTATTATTCCCGCCGTTTCGGTGCCGGTTTCGCTGATTGGTACGTTTGCGGCGATGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGATGAGTCTGTCACTGGTGGCGGTGTTCCTGCCGCTGCTGTTGATGGGCGGATTGCCGGGCCGACTGTTACGCGAATTTGCCGTGACGCTTTCTGTCGCCATTGGTATATCGTTGCTGGTTTCTCTGACATTAACGCCAATGATGTGTGGCTGGATGCTGAAAGCCAGCAAGCCGCGCGAGCAAAAGCGACTGCGTGGTTTTGGTCGCATGTTGGTAGCCCTGCAACAAGGCTACGGCAAGTCACTAAAATGGGTGCTCAATCATACCCGTCTGGTGGGCGTGGTGCTGCTTGGCACCATTGCGCTGAATATCTGGCTGTATATCTCGATCCCGAAAACCTTCTTCCCGGAGCAGGACACTGGCGTGTTGATGGGCGGGATTCAGGCGGATCAGAGTATTTCGTTTCAGGCGATGCGCGGTAAGTTGCAGGATTTCATGAAAATTATCCGTGACGATCCGGCAGTGGATAATGTCACCGGCTTTACAGGCGGTTCGCGAGTGAACAGCGGGATGATGTTTATCACCCTCAAGCCACGCGACGAACGCAGCGAAACGGCGCAGCAAATTATCGACCGTCTGCGCGTAAAACTGGCGAAAGAACCGGGGGCGAATCTGTTCCTGATGGCGGTACAGGATATTCGCGTTGGTGGGCGTCAGTCGAACGCCAGCTACCAGTACACGTTGTTATCCGACGACCTGGCGGCACTGCGAGAATGGGAGCCGAAAATCCGCAAAAAACTGGCGACGTTGCCGGAACTGGCGGACGTGAACTCCGATCAGCAGGATAACGGCGCGGAGATGAATCTGGTTTACGACCGCGACACCATGGCACGGCTGGGAATCGACGTACAAGCCGCCAACAGTCTGTTAAATAACGCCTTCGGTCAGCGGCAAATCTCGACCATTTACCAGCCGATGAACCAGTATAAAGTGGTGATGGAAGTGGATCCGCGCTATACCCAGGACATCAGTGCGCTGGAAAAAATGTTCGTTATCAATAACGAAGGCAAAGCGATCCCGCTGTCGTATTTCGCTAAATGGCAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGATTCTCTCCACCCTGCCCTCGGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAA", + "dna_sequence_length": 3078, + "functions": [ + "multidrug efflux system, subunit C" + ], + "id": "CDS_2063", + "location": [ + [ + "NC_000913", + 2158386, + "+", + 3078 + ] + ], + "md5": "027a8a1dd3b58e21fcb3169f215b32e5", + "parent_gene": "", + "protein_md5": "e7c898bf12dee6c8c0f55933623223aa", + "protein_translation": "MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIIVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE", + "protein_translation_length": 1025, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006879" + ], + [ + "gene_synonym", + "ECK2073" + ], + [ + "gene_synonym", + "EcoGene:EG12136" + ], + [ + "gene_synonym", + "GI:16130017" + ], + [ + "gene_synonym", + "GeneID:946601" + ], + [ + "gene_synonym", + "JW2062" + ], + [ + "gene_synonym", + "NP_416581.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36554" + ], + [ + "gene_synonym", + "b2077" + ], + [ + "gene_synonym", + "iceT" + ], + [ + "gene_synonym", + "mdtD" + ], + [ + "gene_synonym", + "yegB" + ] + ], + "dna_sequence": "ATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATATTTTCTTTACCGCCATCGTGCTGTTTACTCTCGGTTCACTGTTTTGCGCGCTTTCCGGCACGCTGAACGAACTGTTGCTGGCACGCGCGTTACAGGGCGTTGGCGGCGCGATGATGGTGCCGGTCGGCAGATTGACGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCGGTCAGGTCGGTCCGCTGCTCGGTCCGGCGCTCGGCGGTCTGCTGGTGGAGTACGCATCGTGGCACTGGATCTTTTTGATCAACATTCCGGTGGGGATTATCGGTGCGATCGCCACATTGCTGTTAATGCCGAACTACACCATGCAGACGCGGCGCTTTGATCTCTCCGGATTTTTATTGCTGGCGGTTGGCATGGCGGTATTAACCCTGGCGCTGGACGGCAGTAAAGGTACAGGTTTATCGCCGCTGACGATTGCAGGCCTGGTCGCAGTTGGCGTGGTGGCACTGGTGCTTTATCTGCTGCACGCCAGAAATAACAACCGTGCCCTGTTCAGTCTGAAACTGTTCCGTACTCGTACCTTTTCGCTGGGCCTGGCGGGGAGCTTTGCCGGACGTATTGGCAGTGGCATGTTGCCCTTTATGACACCGGTTTTCCTGCAAATTGGCCTCGGTTTCTCGCCGTTTCATGCCGGACTGATGATGATCCCGATGGTGCTTGGCAGCATGGGAATGAAGCGAATTGTGGTACAGGTGGTGAATCGCTTTGGTTATCGTCGGGTACTGGTAGCGACCACGCTGGGTCTGTCGCTGGTCACCCTGTTGTTTATGACTACCGCCCTGCTGGGCTGGTACTACGTTTTGCCGTTCGTCCTGTTTTTACAAGGGATGGTCAACTCGACGCGTTTCTCCTCCATGAACACCCTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGATTATGCAATTGTCGATGAGTATCGGCGTCACTATCGCCGGGCTGTTGCTGGGACTTTTTGGTTCACAGCATGTCAGCGTCGACAGCGGCACCACACAAACCGTCTTTATGTACACCTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGA", + "dna_sequence_length": 1416, + "functions": [ + "putative citrate/iron-citrate/zinc-citrate efflux transporter" + ], + "id": "CDS_2064", + "location": [ + [ + "NC_000913", + 2161464, + "+", + 1416 + ] + ], + "md5": "a09b10e785540d9d2c82e15cfc6351b3", + "parent_gene": "", + "protein_md5": "0990c472eaab7842cb3e3e7e4a72b46d", + "protein_translation": "MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLLLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLTIAGLVAVGVVALVLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLSLVTLLFMTTALLGWYYVLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGSQHVSVDSGTTQTVFMYTWLSMALIIALPAFIFARVPNDTHQNVAISRRKRSAQ", + "protein_translation_length": 471, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006882" + ], + [ + "gene_synonym", + "ECK2074" + ], + [ + "gene_synonym", + "EcoGene:EG11617" + ], + [ + "gene_synonym", + "GI:16130018" + ], + [ + "gene_synonym", + "GeneID:946611" + ], + [ + "gene_synonym", + "JW2063" + ], + [ + "gene_synonym", + "NP_416582.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30847" + ], + [ + "gene_synonym", + "b2078" + ], + [ + "gene_synonym", + "baeS" + ] + ], + "dna_sequence": "ATGAAGTTCTGGCGACCCGGTATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTGGTCCGCGAGCGCCGATTCCACCTGACGGTACACGGCGACCCATTCTGGTCAACGGTGCGGAAGTTGGCGCGGTGATCGCCTCCCCCGTTGAGCGGTTAACGCGCAATACTGATATCAATTTCGATAAACAACAGCGGCAAACCAGCTGGTTGATTGTCGCCCTGGCAACGTTACTCGCGGCACTTGCCACTTTTCTGCTGGCGCGCGGTTTACTGGCACCGGTAAAACGACTTGTCGATGGCACGCACAAACTGGCGGCGGGCGATTTCACTACCCGCGTAACGCCCACCAGTGAAGATGAACTGGGCAAACTGGCGCAAGACTTCAACCAGCTTGCCAGCACACTGGAGAAAAACCAGCAAATGCGGCGCGATTTTATGGCCGATATTTCTCACGAACTGCGTACGCCATTAGCGGTGCTGCGCGGTGAACTGGAAGCCATTCAGGATGGCGTGCGTAAATTCACGCCGGAGACGGTGGCGTCTTTACAGGCGGAGGTCGGTACACTGACCAAACTGGTTGACGATCTCCATCAGTTGTCGATGTCTGATGAAGGCGCTCTCGCCTATCAAAAAGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCAGTCGTGGCCTGAAACTGCAATTTTCCCTGCCAGACAGTATTACCGTATTTGGCGATCGCGACCGTTTAATGCAGTTATTCAATAACTTACTGGAAAACAGCCTGCGCTACACTGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACGATCAGCTACAAAAATTGTTTGAACGTTTTTATCGCACCGAAGGTTCCCGCAACCGTGCCAGCGGCGGTTCCGGGCTGGGGCTGGCGATTTGCCTGAACATTGTTGAAGCACATAATGGTCGCATTATTGCTGCCCATTCGCCTTTTGGCGGGGTAAGCATTACAGTAGAGTTACCGCTGGAACGGGATTTACAGAGAGAAGTATGA", + "dna_sequence_length": 1404, + "functions": [ + "sensory histidine kinase in two-component regulatory system with BaeR" + ], + "id": "CDS_2065", + "location": [ + [ + "NC_000913", + 2162876, + "+", + 1404 + ] + ], + "md5": "775fe6d0ee46bcfb6aca2ac447c40b0c", + "parent_gene": "", + "protein_md5": "0afded3e527f8d8947fc9c1aed68bf55", + "protein_translation": "MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFDKQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLQISAGQRDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006884" + ], + [ + "gene_synonym", + "ECK2075" + ], + [ + "gene_synonym", + "EcoGene:EG11618" + ], + [ + "gene_synonym", + "GI:16130019" + ], + [ + "gene_synonym", + "GeneID:946605" + ], + [ + "gene_synonym", + "JW2064" + ], + [ + "gene_synonym", + "NP_416583.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69228" + ], + [ + "gene_synonym", + "b2079" + ], + [ + "gene_synonym", + "baeR" + ] + ], + "dna_sequence": "ATGACCGAGTTACCAATCGACGAAAACACACCGCGTATTTTGATCGTGGAAGATGAACCGAAGCTGGGGCAGTTGCTCATTGATTATCTGCGTGCTGCGAGCTATGCGCCGACGCTTATCAGCCACGGCGATCAGGTACTGCCGTATGTGCGCCAGACACCACCGGATCTGATCCTGTTAGATCTGATGCTCCCTGGCACCGATGGCCTGACGCTGTGCCGGGAAATTCGTCGTTTTTCTGACATTCCGATCGTGATGGTGACGGCAAAAATCGAAGAGATCGATCGCCTGCTGGGGCTGGAGATTGGCGCAGATGATTATATCTGTAAGCCGTACAGCCCACGGGAAGTGGTAGCGCGCGTCAAAACCATTTTGCGCCGTTGCAAACCGCAGCGCGAGTTGCAGCAACAGGATGCTGAAAGCCCGTTGATTATCGACGAAGGTCGTTTTCAGGCTTCATGGCGCGGTAAAATGCTTGACCTGACGCCTGCGGAATTTCGTCTGCTGAAAACGCTCTCTCACGAACCAGGAAAAGTGTTCTCCCGCGAGCAATTGCTCAATCATCTTTATGACGACTACCGCGTAGTAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAG", + "dna_sequence_length": 723, + "functions": [ + "response regulator in two-component regulatory system with BaeS" + ], + "id": "CDS_2066", + "location": [ + [ + "NC_000913", + 2164276, + "+", + 723 + ] + ], + "md5": "dd8684ffb395cb893145fe2a97a4f8de", + "parent_gene": "", + "protein_md5": "2a7a296687bb30a43a16c69021e7bb87", + "protein_translation": "MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006888" + ], + [ + "gene_synonym", + "ECK2076" + ], + [ + "gene_synonym", + "EcoGene:EG14059" + ], + [ + "gene_synonym", + "GI:90111382" + ], + [ + "gene_synonym", + "GeneID:947095" + ], + [ + "gene_synonym", + "JW5339" + ], + [ + "gene_synonym", + "NP_416584.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76402" + ], + [ + "gene_synonym", + "b2080" + ], + [ + "gene_synonym", + "yegP" + ] + ], + "dna_sequence": "ATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATACCTCAAAAACCTCTGCGGAAAAGGGCATCGCGTCGGTGCGTAGCAACAGCCCGCAAGAAGAACGCTATGAGAAAAAAACGGCAAGTAACGGCAAATTCTATTTCAATCTGAAAGCCGCTAATCATCAAATTATCGGCTCCAGCCAGATGTACGCCACCGCGCAATCTCGTGAAACCGGAATTGCCTCCGTTAAAGCCAATGGCACAAGCCAGACGGTGAAAGACAATACGTAA", + "dna_sequence_length": 333, + "functions": [ + "UPF0339 family protein" + ], + "id": "CDS_2067", + "location": [ + [ + "NC_000913", + 2165189, + "+", + 333 + ] + ], + "md5": "c517a9187a741c33923f69d8aab803d5", + "parent_gene": "", + "protein_md5": "41ac41e59f5c958149e04af87818445c", + "protein_translation": "MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006891" + ], + [ + "gene_synonym", + "ECK2077" + ], + [ + "gene_synonym", + "EcoGene:EG14060" + ], + [ + "gene_synonym", + "GI:16130021" + ], + [ + "gene_synonym", + "GeneID:946609" + ], + [ + "gene_synonym", + "JW2066" + ], + [ + "gene_synonym", + "NP_416585.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76403" + ], + [ + "gene_synonym", + "b2081" + ], + [ + "gene_synonym", + "yegQ" + ] + ], + "dna_sequence": "ATGTTTAAACCGGAACTCCTTTCCCCGGCGGGAACGCTGAAAAATATGCGTTACGCTTTCGCTTATGGCGCAGATGCTGTTTATGCGGGCCAGCCGCGTTATTCCCTGCGTGTGCGCAACAACGAATTCAACCACGAAAATCTTCAGCTCGGCATCAATGAAGCCCACGCGCTGGGGAAAAAGTTTTATGTCGTGGTCAACATTGCACCGCACAACGCCAAGCTGAAAACCTTTATCCGTGACCTGAAACCGGTGGTGGAAATGGGGCCGGATGCGCTGATTATGTCCGATCCAGGGCTGATTATGCTGGTGCGTGAGCACTTCCCTGAAATGCCGATCCACCTTTCGGTGCAGGCTAACGCCGTGAACTGGGCGACGGTGAAATTCTGGCAGCAAATGGGCCTGACCCGCGTGATCCTCTCTCGCGAGCTGTCGCTGGAAGAGATTGAAGAGATCCGCAATCAGGTGCCGGATATGGAGATCGAGATCTTCGTTCACGGCGCGCTGTGCATGGCCTACTCCGGTCGCTGCCTGCTCTCTGGCTATATCAACAAGCGCGACCCGAACCAGGGCACCTGCACCAACGCCTGCCGCTGGGAGTACAACGTCCAGGAAGGGAAAGAAGATGATGTTGGCAACATCGTACACAAGTACGAGCCGATTCCGGTGCAAAATGTTGAGCCGACGCTGGGTATCGGCGCACCAACCGACAAAGTGTTTATGATCGAAGAGGCCCAGCGTCCGGGCGAGTATATGACCGCGTTTGAAGATGAGCACGGCACTTACATCATGAACTCGAAAGATCTGCGCGCCATCGCCCATGTAGAACGCCTGACCAAAATGGGCGTGCATTCGCTGAAAATCGAAGGTCGTACCAAATCTTTCTACTATTGTGCACGCACCGCACAGGTTTACCGCAAAGCTATCGATGACGCCGCTGCGGGAAAACCGTTCGATACCAGCCTGCTGGAAACTCTGGAAGGTCTGGCGCATCGTGGCTATACCGAAGGTTTCCTGCGTCGTCATACTCACGACGATTATCAGAACTACGAATACGGTTATTCAGTTTCTGACCGCCAGCAGTTTGTTGGTGAGTTTACCGGTGAGCGCAAGGGGGACCTCGCGGCGGTAGCGGTGAAAAATAAATTCTCCGTTGGCGACAGCCTTGAGCTGATGACGCCGCAAGGCAACATTAATTTTACCCTTGAGCACATGGAAAACGCCAAAGGCGAAGCTATGCCGATAGCACCAGGCGATGGTTATACTGTGTGGCTCCCGGTCCCGCAGGATCTTGAGCTCAATTACGCGCTGCTGATGCGTAATTTCTCCGGGGAAACCACGCGTAATCCCCACGGTAAGTGA", + "dna_sequence_length": 1362, + "functions": [ + "putative peptidase" + ], + "id": "CDS_2068", + "location": [ + [ + "NC_000913", + 2165668, + "+", + 1362 + ] + ], + "md5": "02ce57d9969cbab451e37ccc0dc783d1", + "parent_gene": "", + "protein_md5": "b799accbb4107d450197401457f1d28b", + "protein_translation": "MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPIAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNPHGK", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006893" + ], + [ + "gene_synonym", + "ECK2079" + ], + [ + "gene_synonym", + "EcoGene:EG12425" + ], + [ + "gene_synonym", + "GI:16130022" + ], + [ + "gene_synonym", + "GeneID:945404" + ], + [ + "gene_synonym", + "JW2067" + ], + [ + "gene_synonym", + "NP_416586.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37057" + ], + [ + "gene_synonym", + "b2082" + ], + [ + "gene_synonym", + "ogrK" + ] + ], + "dna_sequence": "ATGTTTCATTGTCCTTTATGCCAGCATGCCGCACATGCGCGTACAAGCCGCTATATCACTGACACGACAAAAGAGCGTTATCACCAGTGTCAGAACGTGAATTGCAGCGCCACGTTCATCACTTATGAGTCGGTACAGCGATACATTGTGAAGCCGGGAGAAGTCCACGTCGTAAGGCCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAA", + "dna_sequence_length": 219, + "functions": [ + "orphan Ogr protein, positive regulator of P2 growth" + ], + "id": "CDS_2069", + "location": [ + [ + "NC_000913", + 2167520, + "-", + 219 + ] + ], + "md5": "ce09338bdb37c7b4e6089a3441b745c0", + "parent_gene": "", + "protein_md5": "0b0c31dc09b148e28d9f1b02f5935420", + "protein_translation": "MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRPHPLPSGQQIMWM", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006896" + ], + [ + "gene_synonym", + "ECK2080" + ], + [ + "gene_synonym", + "EcoGene:EG14309" + ], + [ + "gene_synonym", + "GeneID:949050" + ], + [ + "gene_synonym", + "JW5886" + ], + [ + "gene_synonym", + "b2083" + ], + [ + "gene_synonym", + "yegZ" + ] + ], + "dna_sequence": "GTAGCAGAGTTCTCCATCAGCCTGGCTACCGGTCGGGCAGATATTTACACGGAAACACCGGTCAAAGTGTCTGGCTTTAAGCGCGTCATAGACGAGCAGGACTGGACAATCACTAAGGTGACACATTTTCTGAATAATAGCGGCTTCACGACGTCATTAGAGCTTGAGGTCAGGCTTTCTGATGTGGGGTACGAAACAGAAGATAATGAGTGA", + "dna_sequence_length": 213, + "id": "CDS_2070", + "location": [ + [ + "NC_000913", + 2167814, + "-", + 213 + ] + ], + "md5": "3e954bfb30c6bb3aecc6b6c484f3d8d5", + "parent_gene": "", + "protein_md5": "3480ee396a72e2051929f6213358bd41", + "protein_translation": "VAEFSISLATGRADIYTETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVGYETEDNE", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006907" + ], + [ + "gene_synonym", + "ECK2081" + ], + [ + "gene_synonym", + "EcoGene:EG14061" + ], + [ + "gene_synonym", + "GI:90111383" + ], + [ + "gene_synonym", + "GeneID:946613" + ], + [ + "gene_synonym", + "JW5837" + ], + [ + "gene_synonym", + "NP_416589.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76406" + ], + [ + "gene_synonym", + "b2085" + ], + [ + "gene_synonym", + "yegR" + ] + ], + "dna_sequence": "ATGAAAAAGATAGCTGCTATATCATTAATTAGTATTTTTATTATGTCTGGTTGTGCTGTGCATAATGATGAGACAAGTATCGGTAAATTTGGTCTTGCATATAAAAGTAATATTCAGCGTAAACTCGATAACCAATACTACACCGAAGCCGAAGCTTCTTTAGCCAGGGGTAGAATATCTGGTGCAGAAAATATAGTAAAAAATGATGCAACTCATTTCTGTGTTACTCAGGGCAAAAAAATGCAAATAGTTGAGCTGAAGACAGAAGGTGTAGGATTACATGGTGTCGCTCGTCTGACATTCAAATGTGGAGAGTGA", + "dna_sequence_length": 318, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2071", + "location": [ + [ + "NC_000913", + 2168306, + "-", + 318 + ] + ], + "md5": "bceb8b799b86da316517e8e27ba76288", + "parent_gene": "", + "protein_md5": "42b40cb8c2d2d21bdbec569743b47592", + "protein_translation": "MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDNQYYTEAEASLARGRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFKCGE", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006911" + ], + [ + "gene_synonym", + "ECK2082" + ], + [ + "gene_synonym", + "EcoGene:EG14367" + ], + [ + "gene_synonym", + "GI:16130026" + ], + [ + "gene_synonym", + "GeneID:946626" + ], + [ + "gene_synonym", + "JW2070" + ], + [ + "gene_synonym", + "NP_416590.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76407" + ], + [ + "gene_synonym", + "b2086" + ], + [ + "gene_synonym", + "yegS" + ] + ], + "dna_sequence": "ATGGCAGAATTTCCCGCCAGCTTACTGATTCTTAATGGCAAAAGTACTGACAATCTACCCTTGCGCGAAGCAATTATGCTGTTGCGTGAGGAAGGAATGACGATCCATGTGCGGGTCACCTGGGAGAAAGGCGATGCCGCACGATATGTAGAGGAGGCCCGGAAGTTTGGCGTCGCAACGGTGATTGCCGGTGGTGGCGATGGCACCATTAATGAAGTTTCTACGGCGTTGATTCAGTGTGAGGGGGATGACATACCCGCGCTGGGAATTTTGCCATTAGGAACCGCCAATGATTTTGCCACCAGTGTAGGGATTCCTGAGGCACTGGATAAGGCGCTGAAACTGGCAATTGCCGGTGACGCCATTGCGATAGATATGGCGCAGGTCAACAAACAAACCTGTTTTATTAATATGGCGACAGGCGGATTTGGGACGCGTATTACCACAGAAACGCCGGAAAAATTAAAAGCCGCGCTGGGTAGCGTCTCTTACATCATTCATGGCTTAATGCGTATGGATACTCTGCAACCGGACCGTTGTGAAATCCGCGGTGAAAACTTTCACTGGCAAGGTGACGCCCTGGTCATTGGTATTGGTAACGGGCGTCAGGCCGGTGGCGGTCAGCAATTGTGTCCGAACGCGTTAATTAACGATGGCTTGCTGCAACTGCGCATTTTTACCGGCGATGAAATACTTCCGGCTCTCGTATCAACCTTAAAATCTGACGAAGATAACCCGAATATTATCGAAGGCGCTTCGTCGTGGTTTGATATTCAGGCACCACACGACATCACCTTTAATCTTGATGGCGAACCGTTGAGTGGGCAAAATTTTCATATTGAAATACTTCCGGCAGCGTTGCGTTGTCGATTACCACCAGATTGTCCACTGTTGCGTTAA", + "dna_sequence_length": 900, + "functions": [ + "phosphatidylglycerol kinase, metal-dependent" + ], + "id": "CDS_2072", + "location": [ + [ + "NC_000913", + 2168712, + "+", + 900 + ] + ], + "md5": "0706d1ebddf20f66de46b7d37bbd26cd", + "parent_gene": "", + "protein_md5": "325f5052e7edecd440db56144b3d5449", + "protein_translation": "MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006914" + ], + [ + "gene_synonym", + "ASAP:ABE-0006921" + ], + [ + "gene_synonym", + "ASAP:ABE-0285099" + ], + [ + "gene_synonym", + "ECK2083" + ], + [ + "gene_synonym", + "EcoGene:EG12162" + ], + [ + "gene_synonym", + "GeneID:2847672" + ], + [ + "gene_synonym", + "JW2074" + ], + [ + "gene_synonym", + "JW5340" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36930" + ], + [ + "gene_synonym", + "b4498" + ], + [ + "gene_synonym", + "gatR" + ] + ], + "dna_sequence": "ATGAATTCATTCGAGCGAAGGAATAAGATCATCCAATTAGTGAATGAACAGGGAACCGTGCTTGTTCAGGATCTGGCGGGAGTATTTGCTGCCTCGGAAGCGACAATCCGTGCCGATTTGCGCTTTCTCGAACAAAAAGGCGTGGTTACGCGCTTTCATGGCGGTGCGGCGAAAATAATGTCTGGTAATAGTGAAACCGAGACCCAGGAAGTCGGGTTTAAAGAGCGATTTCAGCTCGCCAGCGCGCCAAAAAACAGAATAGCGCAGGCGGCAGTCAAAATGATCCACGAAGGGATGACCGTTATTCTCGACAGCGGAAGTACGACAATGCTTATCGCCGAAGGATTAATGACCGCCAAAAATATCACGGTGATTACCAACAGTCTCCCGGCAGCGTTTGCCCTTTCCGAAAATAAAGACATTACTCTGGTCGTCTGTGGTGGCACGGTCCGCCATAAAACGCGCTCGATGCATGGTTCCATTGCCGAGCGTTCATTACAGGATATTAATGCCGATTTAATGTTTGTCGGTGCTGATGGTATTGATGCGGTTAATGGTATTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGACATTATTATTACCGATGATGCTGTGTCAGAGGTGGATAAACTGGCATTGCAGAAGACGCGGGTAAAATTAATTACGGTGTAG", + "dna_sequence_length": 774, + "id": "CDS_2073", + "location": [ + [ + "NC_000913", + 2171727, + "-", + 299 + ], + [ + "NC_000913", + 2170167, + "-", + 475 + ] + ], + "md5": "c46cf7f62399e5ed6587805b5174e27d", + "parent_gene": "", + "protein_md5": "9a4a98271e393a4fd93064d8a62aca18", + "protein_translation": "MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006917" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524731" + ], + [ + "gene_synonym", + "GeneID:946616" + ], + [ + "gene_synonym", + "NP_416592.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF70" + ], + [ + "gene_synonym", + "b2088" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_2074", + "location": [ + [ + "NC_000913", + 2170236, + "+", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006919" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16130028" + ], + [ + "gene_synonym", + "GeneID:946629" + ], + [ + "gene_synonym", + "NP_416593.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF83" + ], + [ + "gene_synonym", + "b2089" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", + "dna_sequence_length": 867, + "functions": [ + "IS3 transposase B" + ], + "id": "CDS_2075", + "location": [ + [ + "NC_000913", + 2170532, + "+", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006924" + ], + [ + "gene_synonym", + "ECK2084" + ], + [ + "gene_synonym", + "EcoGene:EG12417" + ], + [ + "gene_synonym", + "GI:16130029" + ], + [ + "gene_synonym", + "GeneID:946598" + ], + [ + "gene_synonym", + "JW2075" + ], + [ + "gene_synonym", + "NP_416594.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S3" + ], + [ + "gene_synonym", + "b2091" + ], + [ + "gene_synonym", + "gatD" + ] + ], + "dna_sequence": "ATGAAATCAGTGGTGAATGATACTGATGGTATCGTGCGCGTTGCAGAAAGCGTCATTCCTGAAATTAAACATCAGGATGAGGTGCGGGTAAAAATTGCCAGCTCGGGCTTATGTGGTTCCGATTTACCCAGGATATTTAAAAATGGTGCACATTATTATCCAATAACGTTAGGCCATGAATTTAGCGGCTATATTGATGCGGTGGGATCCGGTGTTGATGATTTACACCCTGGCGATGCGGTTGCCTGTGTGCCGTTATTACCCTGTTTTACTTGTCCAGAGTGTCTGAAAGGGTTTTATTCCCAGTGCGCAAAATATGATTTTATTGGCTCGCGGCGTGATGGTGGATTTGCTGAATATATTGTCGTTAAGCGAAAAAATGTCTTTGCTCTACCCACGGATATGCCTATTGAGGATGGGGCTTTTATTGAGCCGATTACCGTTGGTCTGCATGCTTTTCATTTAGCGCAAGGTTGTGAGAATAAAAACGTTATTATTATTGGTGCCGGAACCATTGGCCTGCTGGCCATTCAGTGCGCTGTCGCGCTGGGAGCAAAGAGTGTGACGGCGATCGACATTAGTTCAGAAAAACTGGCACTGGCAAAATCTTTCGGTGCGATGCAAACATTTAACAGTAGCGAAATGAGCGCGCCGCAAATGCAGAGCGTTTTACGCGAACTGCGCTTTAATCAGCTTATCCTCGAGACGGCTGGCGTACCGCAAACTGTCGAACTGGCGGTAGAGATTGCCGGTCCTCATGCCCAACTGGCGCTGGTGGGCACGTTGCATCAGGATCTGCATTTAACATCGGCAACGTTTGGCAAAATATTGCGTAAAGAGCTGACGGTTATCGGCAGTTGGATGAACTACTCCAGCCCTTGGCCGGGGCAGGAGTGGGAAACGGCGAGCCGGTTGCTGACAGAACGTAAGTTAAGCCTGGAGCCATTAATCGCTCACCGTGGAAGCTTTGAAAGCTTCGCCCAGGCGGTGCGTGACATCGCTCGTAATGCTATGCCGGGCAAAGTGTTGCTCATTCCCTGA", + "dna_sequence_length": 1041, + "functions": [ + "galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding" + ], + "id": "CDS_2076", + "location": [ + [ + "NC_000913", + 2172873, + "-", + 1041 + ] + ], + "md5": "195db1df37739d5946bc7f2411917781", + "parent_gene": "", + "protein_md5": "6f42f3aa5abc21495c908514279c3116", + "protein_translation": "MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006928" + ], + [ + "gene_synonym", + "ECK2085" + ], + [ + "gene_synonym", + "EcoGene:EG12416" + ], + [ + "gene_synonym", + "GeneID:946603" + ], + [ + "gene_synonym", + "JW2076" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69831" + ], + [ + "gene_synonym", + "b2092" + ], + [ + "gene_synonym", + "gatC" + ] + ], + "dna_sequence": "ATGTTTTCAGAAGTCATGCGTTATATTCTCGACCTCGGCCCTACGGTGATGCTGCCGATTGTCATCATTATTTTTTCTAAAATATTAGGCATGAAGGCAGGCGATTGCTTTAAAGCGGGTCTGCATATCGGGATTGGCTTTGTTGGCATTGGCCTTGTGATTGGCTTAATGCTGGATTCCATTGGCCCGGCGGCGAAAGCGATGGCGGAAAATTTCGACCTGAATCTGCATGTGGTCGATGTTGGCTGGCCGGGCTCTTCACCAATGACCTGGGCGTCGCAAATTGCGCTGGTGGCGATTCCGATTGCGATTCTGGTTAACGTGGCGATGTTACTGACCCGTATGACGCGGGTGGTAAATGTTGATATCTGGAATATCTGGCATATGACCTTCACCGGCGCGTTGCTGCATCTGGCAACCGGTTCATGGATGATAGGGATGGCAGGTGTGGTAATTCACGCGGCGTTTGTTTATAAGCTCGGCGACTGGTTTGCCCGCGATACCCGAAATTTCTTTGAGCTGGAAGGTATTGCTATTCCGCACGGTACGTCGGCGTATATGGGGCCGATTGCGGTGCTGGTCGATGCTATCATCGAGAAAATCCCAGGCGTTAACCGAATTAAATTTAGCGCCGACGATATTCAGCGCAAATTTGGTCCATTTGGCGAGCCTGTCACCGTGGGTTTTGTGATGGGGCTGATTATCGGCATCCTCGCGGGTTACGATGTCAAAGGTGTATTGCAGCTGGCGGTAAAAACGGCGGCAGTGATGCTGCTAATGCCACGGGTGATTAAACCCATCATGGATGGTTTAACGCCCATCGCTAAGCAGGCTCGTAGTCGTTTACAGGCGAAGTTCGGCGGTCAGGAGTTCCTGATTGGCCTTGATCCGGCGTTGCTGCTGGGACATACGGCGGTGGTATCGGCAAGCCTGATTTTTATCCCACTCACCATTTTAATTGCTGTTTGTGTGCCGGGTAATCAGGTGCTGCCGTTTGGCGATCTTGCCACCATCGGCTTCTTCGTGGCGATGGCGGTCGCCGTGCATCGTGGAAATCTGTTCCGCACCTTAATCTCGGGTGTCATCATTATGAGCATCACCCTGTGGATCGCGACGCAAACTATTGGTTTGCACACCCAACTGGCGGCTAATGCTGGGGCGTTAAAAGCCGGGGGTATGGTGGCTTCAATGGATCAGGGCGGTTCTCCCATTACCTGGTTACTGATTCAGGTTTTCTCCCCGCAAAATATTCCCGGTTTCATTATTATCGGTGCAATTTATCTGACCGGTATTTTCATGACCTGGCGTAGAGCGCGTGGCTTTATTAAACAAGAGAAAGTCGTTCTCGCAGAATAA", + "dna_sequence_length": 1356, + "id": "CDS_2077", + "location": [ + [ + "NC_000913", + 2174278, + "-", + 914 + ], + [ + "NC_000913", + 2173362, + "-", + 442 + ] + ], + "md5": "93b880bc630691024c2647473dd05130", + "parent_gene": "", + "protein_md5": "702c6f1aed8f0a0c103508cd8ac66215", + "protein_translation": "MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLAE", + "protein_translation_length": 451, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006930" + ], + [ + "gene_synonym", + "ECK2086" + ], + [ + "gene_synonym", + "EcoGene:EG12415" + ], + [ + "gene_synonym", + "GI:16130031" + ], + [ + "gene_synonym", + "GeneID:946610" + ], + [ + "gene_synonym", + "JW2077" + ], + [ + "gene_synonym", + "NP_416596.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37188" + ], + [ + "gene_synonym", + "b2093" + ], + [ + "gene_synonym", + "gatB" + ] + ], + "dna_sequence": "ATGAAACGCAAGATTATTGTCGCTTGCGGAGGCGCGGTTGCGACCTCTACGATGGCGGCGGAAGAAATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGTTCACGGCATGCCTTTTATTTCTGGTATCGGTATCGAAGCATTACAAAATAAAATTCTGACTATCTTACAGGGGTGA", + "dna_sequence_length": 285, + "functions": [ + "galactitol-specific enzyme IIB component of PTS" + ], + "id": "CDS_2078", + "location": [ + [ + "NC_000913", + 2174566, + "-", + 285 + ] + ], + "md5": "4202a2a6e0199bf0dbf2f672794664c0", + "parent_gene": "", + "protein_md5": "da69806bef54169d11eeb8bb4dcc9aa2", + "protein_translation": "MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006932" + ], + [ + "gene_synonym", + "ECK2087" + ], + [ + "gene_synonym", + "EcoGene:EG12414" + ], + [ + "gene_synonym", + "GI:16130032" + ], + [ + "gene_synonym", + "GeneID:946633" + ], + [ + "gene_synonym", + "JW2078" + ], + [ + "gene_synonym", + "JW2081" + ], + [ + "gene_synonym", + "NP_416597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69828" + ], + [ + "gene_synonym", + "b2094" + ], + [ + "gene_synonym", + "gatA" + ] + ], + "dna_sequence": "ATGACTAACCTGTTTGTTCGTAGCGGAATTTCTTTTGTCGATCGTAGCGAAGTTTTAACCCATATCGGTAATGAGATGCTCGCCAAAGGTGTGGTTCATGATACCTGGCCACAGGCATTAATTGCCAGAGAAGCAGAATTCCCTACCGGGATAATGCTTGAGCAGCACGCTATTGCAATACCGCATTGTGAGGCGATTCATGCTAAGTCGTCAGCCATTTATCTGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAA", + "dna_sequence_length": 453, + "functions": [ + "galactitol-specific enzyme IIA component of PTS" + ], + "id": "CDS_2079", + "location": [ + [ + "NC_000913", + 2175049, + "-", + 453 + ] + ], + "md5": "7cadf9a0d0a78e24d8c560b12ed2abb2", + "parent_gene": "", + "protein_md5": "124c6ffa0fb608b2f175247458f097f9", + "protein_translation": "MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006934" + ], + [ + "gene_synonym", + "ECK2088" + ], + [ + "gene_synonym", + "EcoGene:EG12418" + ], + [ + "gene_synonym", + "GI:16130033" + ], + [ + "gene_synonym", + "GeneID:946641" + ], + [ + "gene_synonym", + "JW2082" + ], + [ + "gene_synonym", + "NP_416598.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C8J8" + ], + [ + "gene_synonym", + "b2095" + ], + [ + "gene_synonym", + "gatZ" + ] + ], + "dna_sequence": "ATGAAAACGTTAATTGCCCGGCATAAAGCTGGTGAACATATCGGCATATGTTCAGTCTGTTCTGCCCATCCGTTGGTTATCGAAGCGGCGCTGGCATTTGATCGCAACAGCACGCGCAAAGTGCTGATTGAAGCAACGTCAAACCAGGTCAATCAATTTGGCGGTTATACCGGAATGACACCGGCAGACTTTCGCGAATTTGTTTTTACGATTGCCGATAAAGTTGGGTTTGCACGCGAACGCATTATTCTCGGCGGCGATCATCTGGGGCCAAACTGCTGGCAGCAAGAAAATGCGGATGCGGCGATGGAAAAATCCGTCGAGCTGGTAAAGGAATATGTTCGTGCCGGCTTCAGTAAAATTCATCTTGATGCGTCAATGTCCTGCGCGGGGGATCCCATACCGTTAGCACCAGAAACGGTTGCGGAACGAGCTGCTGTGCTTTGCTTTGCTGCGGAAAGTGTGGCGACAGATTGCCAGCGTGAGCAACTGAGCTATGTCATTGGCACCGAAGTTCCGGTTCCGGGCGGTGAGGCCAGCGCCATTCAGTCAGTACACATCACCCATGTTGAAGATGCCGCCAATACTTTACGTACGCATCAAAAGGCCTTTATTGCCCGTGGGCTGACAGAGGCGTTAACACGTGTGATTGCCATCGTGGTGCAGCCGGGTGTGGAATTTGATCACAGCAATATTATCCATTATCAGCCGCAGGAAGCGCAGCCGCTGGCGCAATGGATAGAAAACACCCGAATGGTTTATGAAGCACATTCTACCGATTACCAGACCCGGACGGCTTATTGGGAATTAGTCCGCGATCACTTTGCAATATTGAAAGTCGGTCCCGCATTAACCTTTGCTTTACGCGAGGCGATATTTGCACTGGCACAAATTGAGCAGGAACTTATCGCCCCTGAAAATCGCAGCGGTTGCCTGGCGGTAATTGAAGAAGTGATGCTCGACGAACCGCAATACTGGAAAAAATATTATCGTACGGGTTTTAACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAAAATAGCGTCGAAACGATGATGGTGAATCTTGAAGGCGTGGACATCCCACTGGGCATGATTAGTCAGTATCTTCCCAAACAATTTGAACGCATTCAGTCCGGGGAATTATCAGCAATACCGCATCAGCTGATTATGGATAAAATTTATGATGTTTTGCGCGCCTATCGCTACGGCTGTGCGGAATAA", + "dna_sequence_length": 1263, + "functions": [ + "D-tagatose 1,6-bisphosphate aldolase 2, subunit" + ], + "id": "CDS_2080", + "location": [ + [ + "NC_000913", + 2176321, + "-", + 1263 + ] + ], + "md5": "5780473c72395027f09b68aae5630bb6", + "parent_gene": "", + "protein_md5": "ed097c9ccd7ba8c0bcdef3e6f706a3e2", + "protein_translation": "MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGFNDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE", + "protein_translation_length": 420, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006938" + ], + [ + "gene_synonym", + "ECK2089" + ], + [ + "gene_synonym", + "EcoGene:EG12419" + ], + [ + "gene_synonym", + "GI:90111384" + ], + [ + "gene_synonym", + "GeneID:946636" + ], + [ + "gene_synonym", + "JW5343" + ], + [ + "gene_synonym", + "NP_416599.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C8J6" + ], + [ + "gene_synonym", + "b2096" + ], + [ + "gene_synonym", + "gatY" + ], + [ + "gene_synonym", + "yegF" + ] + ], + "dna_sequence": "ATGTACGTGGTATCGACAAAGCAGATGCTGAACAACGCACAGCGCGGCGGTTATGCGGTTCCGGCATTCAATATTCACAATCTCGAAACGATGCAAGTGGTGGTAGAAACCGCTGCCAACCTGCATGCGCCGGTCATCATCGCCGGAACGCCTGGCACATTTACTCATGCTGGTACAGAAAATCTGTTGGCGCTGGTCAGCGCGATGGCGAAGCAATATCACCATCCACTGGCAATTCATCTCGACCATCACACGAAATTTGACGATATCGCTCAGAAGGTTCGTTCTGGCGTGCGCTCAGTCATGATTGACGCCTCGCATTTGCCTTTTGCGCAAAATATTTCACGGGTCAAAGAGGTGGTGGATTTTTGCCATCGCTTTGATGTCAGCGTCGAGGCGGAGCTGGGGCAACTTGGCGGCCAGGAAGATGATGTGCAAGTCAATGAAGCCGATGCGTTGTACACCAACCCCGCTCAGGCGCGTGAATTTGCCGAGGCAACCGGAATTGATTCCCTGGCGGTCGCCATCGGCACGGCTCATGGGATGTATGCCAGCGCACCGGCGCTTGATTTTTCTAGACTGGAGAACATTCGCCAGTGGGTGAACTTACCGCTGGTGCTGCATGGCGCGTCAGGGTTATCGACTAAGGATATTCAGCAAACCATCAAACTGGGGATATGCAAAATCAACGTTGCAACGGAGCTGAAAAATGCCTTCTCGCAGGCGTTAAAAAATTACCTGACCGAGCACCCTGAAGCGACCGATCCCCGGGATTATTTGCAGTCGGCTAAATCCGCAATGCGCGATGTGGTGAGCAAAGTGATTGCCGATTGTGGCTGCGAGGGCAGGGCATAA", + "dna_sequence_length": 855, + "functions": [ + "D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit" + ], + "id": "CDS_2081", + "location": [ + [ + "NC_000913", + 2177204, + "-", + 855 + ] + ], + "md5": "8017bbd8784da8c020a40eb520c0b904", + "parent_gene": "", + "protein_md5": "97eec5ebfd52df21f970f2ab55a49582", + "protein_translation": "MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQAREFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEGRA", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006941" + ], + [ + "gene_synonym", + "ECK2090" + ], + [ + "gene_synonym", + "EcoGene:EG14062" + ], + [ + "gene_synonym", + "GI:90111385" + ], + [ + "gene_synonym", + "GeneID:946632" + ], + [ + "gene_synonym", + "JW5344" + ], + [ + "gene_synonym", + "NP_416600.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A991" + ], + [ + "gene_synonym", + "b2097" + ], + [ + "gene_synonym", + "dhnA" + ], + [ + "gene_synonym", + "fbaB" + ] + ], + "dna_sequence": "ATGACAGATATTGCGCAGTTGCTTGGCAAAGACGCCGACAACCTTTTACAGCACCGTTGTATGACAATTCCTTCTGACCAGCTTTATCTCCCCGGACATGACTACGTAGACCGCGTAATGATTGACAATAATCGCCCGCCAGCGGTGTTACGTAATATGCAGACGTTGTACAACACCGGGCGTCTGGCTGGCACAGGATATCTTTCTATTCTGCCGGTTGACCAGGGCGTTGAGCACTCTGCCGGAGCTTCATTTGCTGCTAACCCGCTCTACTTTGACCCGAAAAACATTGTTGAACTGGCGATCGAAGCGGGCTGTAACTGTGTGGCGTCAACTTACGGCGTGCTGGCGTCGGTATCGCGGCGTTATGCGCATCGCATTCCATTCCTCGTCAAACTTAATCACAACGAGACGCTAAGTTACCCGAATACCTACGATCAAACGCTGTATGCCAGCGTGGAGCAGGCGTTCAACATGGGCGCGGTTGCGGTTGGTGCGACTATCTATTTTGGCTCGGAAGAGTCACGTCGCCAGATTGAAGAAATTTCTGCGGCTTTTGAACGTGCGCACGAGCTGGGTATGGTGACAGTGCTGTGGGCCTATTTGCGTAACTCCGCCTTTAAGAAAGATGGCGTTGATTACCATGTTTCCGCCGACCTGACCGGTCAGGCAAACCATCTGGCGGCAACCATCGGTGCAGATATCGTCAAACAAAAAATGGCGGAAAATAACGGCGGCTATAAAGCAATTAATTACGGTTACACCGACGATCGTGTTTACAGCAAATTGACCAGCGAAAACCCGATTGATCTGGTGCGTTATCAGTTAGCTAACTGCTATATGGGTCGGGCTGGGTTGATAAACTCCGGCGGTGCTGCGGGCGGTGAAACTGACCTCAGCGATGCAGTGCGTACTGCGGTTATCAACAAACGCGCAGGCGGAATGGGGCTGATTCTTGGACGTAAAGCGTTCAAGAAATCGATGGCTGACGGCGTGAAACTGATTAACGCCGTGCAGGACGTTTATCTCGATAGCAAAATTACTATCGCCTGA", + "dna_sequence_length": 1053, + "functions": [ + "fructose-bisphosphate aldolase class I" + ], + "id": "CDS_2082", + "location": [ + [ + "NC_000913", + 2178564, + "-", + 1053 + ] + ], + "md5": "f25e454a820cab8fca0bdf0c962ac885", + "parent_gene": "", + "protein_md5": "4fb159bd103dbaf0e750ffb1d7efc7c4", + "protein_translation": "MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006946" + ], + [ + "gene_synonym", + "ECK2091" + ], + [ + "gene_synonym", + "EcoGene:EG14063" + ], + [ + "gene_synonym", + "GI:16130036" + ], + [ + "gene_synonym", + "GeneID:946638" + ], + [ + "gene_synonym", + "JW2085" + ], + [ + "gene_synonym", + "NP_416601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76417" + ], + [ + "gene_synonym", + "b2098" + ], + [ + "gene_synonym", + "yegT" + ] + ], + "dna_sequence": "ATGAAAACAACAGCAAAGCTGTCGTTCATGATGTTTGTTGAATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTTGTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAATTGGCTGGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCATCACTGACCGCTTTTTCTCGGCGCAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTGATGTATTTCGCTGCGCAACAGACCACTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCATTGCGCTGACTAACAGCATCGCTTTTGCCAACGTGCCGGATGTTGAGCGTGATTTCCCGCGCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGTTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCGTCTTTTTCTTCTGTTCATTCCTGTTTGCGATGCCACTAGCGTTCTATTACATCTTTGCCAACGGTTATCTGACCGAAGTTGGCATGAAAAACGCCACCGGCTGGATGACGCTCGGCCAGTTCTCTGAAATCTTCTTTATGCTGGCATTGCCGTTTTTCACTAAACGCTTTGGTATCAAAAAGGTATTATTGCTTGGTCTGGTCACCGCTGCGATCCGCTATGGCTTCTTTATTTACGGTAGTGCGGATGAATATTTCACCTACGCGTTACTGTTCCTCGGTATTTTGCTTCACGGCGTAAGTTACGATTTTTACTACGTTACCGCTTACATCTATGTCGATAAAAAAGCCCCCGTGCATATGCGTACCGCTGCGCAGGGGCTGATCACGCTCTGCTGCCAGGGCTTCGGCAGTTTGCTCGGCTATCGTCTTGGCGGTGTGATGATGGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGA", + "dna_sequence_length": 1278, + "functions": [ + "nucleoside transporter, low affinity" + ], + "id": "CDS_2083", + "location": [ + [ + "NC_000913", + 2178821, + "+", + 1278 + ] + ], + "md5": "fba61537ceb623ccd9ec13244f20d68b", + "parent_gene": "", + "protein_md5": "f5b5bd25d1f3bbc62cf55475dfb9a5e9", + "protein_translation": "MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFRESDNEITAIKVDDRDIALTQGEVK", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006948" + ], + [ + "gene_synonym", + "ECK2092" + ], + [ + "gene_synonym", + "EcoGene:EG14064" + ], + [ + "gene_synonym", + "GI:16130037" + ], + [ + "gene_synonym", + "GeneID:946630" + ], + [ + "gene_synonym", + "JW2086" + ], + [ + "gene_synonym", + "NP_416602.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76418" + ], + [ + "gene_synonym", + "b2099" + ], + [ + "gene_synonym", + "yegU" + ] + ], + "dna_sequence": "ATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGCCGCGTTAAAGCACACTTTGGCTGGATTGACCGTTTTCTTCCTGGACCAAAGGAGAATAACGCGGCCTGTTATTTTAACCGCGCCGAATTCACCGACGATACCTCGATGGCGCTGTGTCTGGCGGATGCGTTACTGGAACGTGAAGGCAAGATCGATCCGGATCTGATTGGGCGTAATATTCTCGACTGGGCGCTGCGTTTCGACGCCTTTAACAAAAACGTACTAGGTCCGACCTCGAAGATTGCGCTTAACGCCATTCGCGACGGTAAACCCGTTGCTGAACTGGAAAACAACGGCGTGACCAACGGCGCAGCGATGCGCGTCTCGCCATTAGGTTGTTTGCTTCCGGCGCGTGATGTTGATTCCTTTATTGATGATGTAGCGCTGGCGTCCAGCCCGACCCATAAATCCGATCTGGCGGTTGCAGGCGCGGTAGTCATCGCATGGGCGATTTCTCGTGCCATTGACGGAGAAAGCTGGTCAGCGATTGTTGATTCCCTGCCTTCAATTGCGCGACATGCACAGCAAAAACGCATCACTACGTTCAGCGCCTCACTGGCGGCGCGGCTGGAGATTGCGCTGAAAATTGTGCGCAATGCCGACGGCACCGAATCCGCCAGCGAACAGCTTTACCAGGTCGTTGGCGCAGGTACCAGCACTATTGAGTCCGTTCCGTGCGCCATTGCGCTGGTTGAACTGGCACAAACCGACCCGAATCGCTGCGCCGTCCTGTGCGCTAACCTTGGCGGCGACACAGACACCATCGGTGCTATGGCGACGGCAATTTGCGGCGCGTTGCATGGCGTTAACGCTATCGATCCTGCGTTAAAGGCGGAACTGGATGCGGTAAATCAGCTTGATTTCAACCGCTATGCCACAGCGCTGGCGAAATATCGTCAACAACGGGAGGCGGTATGA", + "dna_sequence_length": 1005, + "functions": [ + "ADP-ribosylglycohydrolase family protein" + ], + "id": "CDS_2084", + "location": [ + [ + "NC_000913", + 2180095, + "+", + 1005 + ] + ], + "md5": "9b73a6191b259a0728a7ba10bac7b94c", + "parent_gene": "", + "protein_md5": "174e44157200e51d2a1bf67554fd6312", + "protein_translation": "MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRITTFSASLAARLEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006950" + ], + [ + "gene_synonym", + "ECK2093" + ], + [ + "gene_synonym", + "EcoGene:EG14065" + ], + [ + "gene_synonym", + "GI:16130038" + ], + [ + "gene_synonym", + "GeneID:946637" + ], + [ + "gene_synonym", + "JW2087" + ], + [ + "gene_synonym", + "NP_416603.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76419" + ], + [ + "gene_synonym", + "b2100" + ], + [ + "gene_synonym", + "yegV" + ] + ], + "dna_sequence": "ATGAGCGGCGCTCGATTACACACGCTGCTGCCTGAATTAACCACGCGTCAGTCGGTGATGGTCGTCGGCGCGGCGGTCATTGACGTGATCGCCGACGCTTATGCCCTCCCCTGGCGTGGGTGCGATATCGAACTGAAACAGCAGAGCGTTAACGTTGGCGGCTGCGCACTGAATATTGCCGTGGCGTTAAAGCGCCTCGGCATCGAAGCGGGTAATGCCTTGCCGCTCGGTCAGGGCGTGTGGGCGGAGATGATTCGCAACCGGATGGCAAAAGAGGGCTTAATCAGCCTGATCGATAACGCCGAAGGTGATAACGGCTGGTGTCTGGCGCTGGTTGAGCCGGATGGCGAACGCACTTTTATGTCATTCAGCGGTGTTGAAAATCAGTGGAATCGCCAGTGGCTGGCGCGATTAACCGTTGCGCCTGGCAGCCTGCTCTATTTTTCCGGTTATCAACTGGCCTCGCCCTGCGGCGAATTGTTAGTGGAATGGCTGGAAGAGCTGCAAGACGTGACGCCGTTTATCGATTTTGGCCCACGTATTGGCGATATCCCGGATGCATTACTGGCGCGGATCATGGCCTGTCGACCTTTAGTGTCGCTCAATCGTCAAGAGGCTGAGATTGCCGCCGAACGTTTTGCTTTATCCGCAGAGATAACAACACTTGGCAAGCAATGGCAGGAGAAATTTGCCGCGCCGTTGATCGTTCGTCTCGATAAAGAAGGCGCATGGTATTTCAGCAACGACGCTTCTGGCTGCATTCCGGCATTTCCAACGCAAGTTGTCGACACCATTGGGGCGGGCGACAGTCATGCCGGTGGCGTACTTGCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAG", + "dna_sequence_length": 966, + "functions": [ + "putative kinase" + ], + "id": "CDS_2085", + "location": [ + [ + "NC_000913", + 2181096, + "+", + 966 + ] + ], + "md5": "d56c4170cb1e640aad270bda85b7ed70", + "parent_gene": "", + "protein_md5": "b8391cec0c6fc1ed6169c96704329db9", + "protein_translation": "MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEMIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006952" + ], + [ + "gene_synonym", + "ECK2094" + ], + [ + "gene_synonym", + "EcoGene:EG14066" + ], + [ + "gene_synonym", + "GI:16130039" + ], + [ + "gene_synonym", + "GeneID:946639" + ], + [ + "gene_synonym", + "JW2088" + ], + [ + "gene_synonym", + "NP_416604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACM5" + ], + [ + "gene_synonym", + "b2101" + ], + [ + "gene_synonym", + "yegW" + ] + ], + "dna_sequence": "ATGGAACAAGCGCATACCCAGCTGATTGCCCAACTGAACGAGCGTATTTTAGCGGCGGATAACACGCCGCTTTATATTAAGTTTGCCGAAACGGTAAAAAATGCCGTGCGCAGCGGGGTGCTGGAGCATGGCAATATTTTGCCCGGTGAGCGTGATTTAAGTCAGTTAACCGGCGTTTCGCGCATTACGGTGCGCAAGGCGATGCAGGCGCTGGAAGAAGAGGGTGTGGTGACGCGTTCGCGCGGTTACGGCACGCAGATCAACAACATCTTCGAATACTCGTTGAAAGAAGCGCGAGGTTTTTCTCAGCAGGTGGTATTGCGCGGGAAAAAGCCCGATACGCTATGGGTTAACAAGCGTGTCGTGAAATGTCCCGAAGAAGTCGCGCAGCAGCTGGCGGTCGAAGCAGGAAGTGATGTCTTTTTGCTTAAGCGTATTCGCTATGTCGATGAAGAAGCGGTATCGATTGAGGAATCGTGGGTTCCGGCGCATTTAATTCATGATGTTGATGCCATCGGGATTTCACTTTATGACTATTTCCGCAGCCAGCACATTTACCCACAACGTACGCGTTCCCGCGTTAGCGCCCGGATGCCGGATGCCGAGTTTCAGTCACATATTCAGTTAGATAGCAAAATACCGGTGCTGGTGATCAAGCAAGTGGCGCTTGACCAACAGCAACGGCCTATTGAGTACAGCATTAGCCACTGTCGCAGCGATCTATACGTTTTTGTGTGCGAGGAGTAG", + "dna_sequence_length": 747, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2086", + "location": [ + [ + "NC_000913", + 2182781, + "-", + 747 + ] + ], + "md5": "b6a42f0b4691b90928905ec8de808fa3", + "parent_gene": "", + "protein_md5": "e7651cd274047e1c6cfe7a7008bcbc94", + "protein_translation": "MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCEE", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006955" + ], + [ + "gene_synonym", + "ECK2095" + ], + [ + "gene_synonym", + "EcoGene:EG14067" + ], + [ + "gene_synonym", + "GI:90111386" + ], + [ + "gene_synonym", + "GeneID:945543" + ], + [ + "gene_synonym", + "JW5345" + ], + [ + "gene_synonym", + "NP_416605.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76421" + ], + [ + "gene_synonym", + "b2102" + ], + [ + "gene_synonym", + "yegX" + ] + ], + "dna_sequence": "ATGCAGCTAAGAATTACCAGTCGAAAAAAACTCACCTCTCTATTATGCGCTCTTGGGCTAATTTCCATCGTTGCAATTTATCCGCGTCAGACGGTGAATTTTTTCTATTCGACAGCAGTTCAGATTACAGACTACATCCACTTCTACGGTTATCGCCCGGTTAAATCTTTCGCTATTCGCATTCCTGCCAGTTACACCATTCACGGAATAGATGTTTCGCGCTGGCAGGAGCGGATCGACTGGCAGCGGGTGGCAAAAATGCGCGACAATGGTATCCGCTTACAGTTTGCTTTTATTAAGGCGACGGAAGGCGAAAAGCTGGTGGACCCCTATTTTTCGCGTAACTGGCAACTAAGCCGCGAAAATGGCCTGCTGCGTGGGGCGTATCATTATTTCTCCCCGTCGGTATCCGCTTCAGTTCAGGCGAGATTATTTCTGCAAACGGTGGATTTCTCACAAGGCGATTTCCCTGCCGTGCTGGACGTAGAAGAACGGGGAAAATTATCGGCAAAAGAATTACGCAAGCGGGTAAGTCAGTGGCTAAAAATGGTCGAAAAAAGTACGGGGAAAAAGCCGATTATTTACTCAGGAGCCGTTTTTTATCACACCAATCTGGCGGGCTATTTCAATGAATATCCGTGGTGGGTGGCTCACTACTATCAACGTCGTCCGGACAATGACGGAATGGCCTGGCGCTTCTGGCAGCATTCCGACCGTGGACAGGTAGATGGCATCAATGGTCCGGTGGATTTTAATGTATTTAATGGCACGGTGGAGGAGTTGCAGGCATTCGTTGATGGGATTAAAGAAACGCCTTAA", + "dna_sequence_length": 819, + "functions": [ + "putative family 25 glycosyl hydrolase" + ], + "id": "CDS_2087", + "location": [ + [ + "NC_000913", + 2183651, + "-", + 819 + ] + ], + "md5": "0a24977464946cc560fcc9d266ba5eba", + "parent_gene": "", + "protein_md5": "cd7b18785ef87c8c016d99288a503dd1", + "protein_translation": "MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006958" + ], + [ + "gene_synonym", + "ECK2096" + ], + [ + "gene_synonym", + "EcoGene:EG14068" + ], + [ + "gene_synonym", + "GI:16130041" + ], + [ + "gene_synonym", + "GeneID:946459" + ], + [ + "gene_synonym", + "JW2090" + ], + [ + "gene_synonym", + "NP_416606.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76422" + ], + [ + "gene_synonym", + "b2103" + ], + [ + "gene_synonym", + "thiA" + ], + [ + "gene_synonym", + "thiD" + ], + [ + "gene_synonym", + "thiJ" + ], + [ + "gene_synonym", + "thiN" + ] + ], + "dna_sequence": "ATGAAACGAATTAACGCTCTGACGATTGCCGGTACTGATCCGAGTGGTGGTGCGGGGATTCAGGCCGATCTTAAAACCTTCTCGGCACTTGGCGCTTATGGTTGCTCAGTTATTACTGCACTGGTGGCGCAAAATACCCGTGGCGTACAGTCGGTGTATCGCATTGAGCCTGATTTTGTCGCCGCCCAGCTCGATTCGGTGTTCAGCGATGTGCGAATCGATACCACTAAAATCGGTATGCTGGCGGAAACCGATATTGTTGAAGCGGTGGCAGAACGGTTGCAACGTTATCAGATCCAAAACGTGGTACTCGACACCGTTATGCTGGCAAAAAGCGGCGACCCGCTGCTTTCACCTTCGGCGGTTGCTACGCTGCGCAGTCGATTATTGCCACAGGTTTCATTAATAACGCCAAACTTGCCCGAAGCTGCCGCCTTGCTCGACGCGCCACACGCGCGCACCGAACAGGAAATGCTGGAACAAGGGCGATCGCTGTTGGCGATGGGCTGTGGCGCAGTGCTAATGAAAGGTGGTCATCTGGATGATGAGCAAAGCCCGGACTGGCTGTTTACCCGCGAGGGTGAACAACGGTTTACCGCACCGCGCATTATGACCAAAAACACCCACGGCACTGGTTGTACACTCTCTGCGGCGTTGGCTGCACTACGCCCGCGCCATACAAACTGGGCTGACACCGTACAGGAGGCAAAAAGCTGGCTTTCATCGGCGTTAGCCCAGGCCGACACGCTGGAAGTTGGTCACGGTATTGGTCCGGTTCACCACTTCCACGCCTGGTGGTGA", + "dna_sequence_length": 801, + "functions": [ + "hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase" + ], + "id": "CDS_2088", + "location": [ + [ + "NC_000913", + 2184516, + "-", + 801 + ] + ], + "md5": "be005a2d4a2381975e19b0c25e480883", + "parent_gene": "", + "protein_md5": "65e68a0e92f1beb3c87697c3ebe257da", + "protein_translation": "MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNVVLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLEQGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006960" + ], + [ + "gene_synonym", + "ECK2097" + ], + [ + "gene_synonym", + "EcoGene:EG14069" + ], + [ + "gene_synonym", + "GI:16130042" + ], + [ + "gene_synonym", + "GeneID:945142" + ], + [ + "gene_synonym", + "JW2091" + ], + [ + "gene_synonym", + "NP_416607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76423" + ], + [ + "gene_synonym", + "b2104" + ], + [ + "gene_synonym", + "thiM" + ] + ], + "dna_sequence": "ATGCAAGTCGACCTGCTGGGTTCAGCGCAATCTGCGCACGCGTTACACCTTTTTCACCAACATTCCCCTCTTGTGCACTGCATGACCAATGATGTGGTGCAAACCTTTACCGCCAATACCTTGCTGGCGCTCGGTGCATCGCCAGCGATGGTTATCGAAACCGAAGAGGCCAGTCAGTTTGCGGCTATCGCCAGTGCCTTGTTGATTAACGTTGGCACACTGACGCAGCCACGCGCTCAGGCGATGCGTGCTGCCGTTGAGCAAGCAAAAAGCTCTCAAACACCCTGGACGCTTGATCCAGTAGCGGTGGGTGCGCTCGATTATCGCCGCCATTTTTGTCATGAACTTTTATCTTTTAAACCGGCAGCGATACGTGGTAATGCTTCGGAAATCATGGCATTAGCTGGCATTGCTAATGGCGGACGGGGAGTGGATACCACTGACGCCGCAGCTAACGCGATACCCGCTGCACAAACACTGGCACGGGAAACTGGCGCAATCGTCGTGGTCACTGGCGAGATGGATTATGTTACCGATGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTATCGGCGGTTGTCGCTGCCTGCTGTGCGTTACCAGGCGATACGCTGGAAAATGTCGCATCTGCCTGTCACTGGATGAAACAAGCCGGAGAACGCGCAGTCGCCAGAAGCGAGGGGCCAGGCAGTTTTGTTCCACATTTCCTTGATGCGCTCTGGCAATTGACGCAGGAGGTGCAGGCATGA", + "dna_sequence_length": 789, + "functions": [ + "hydoxyethylthiazole kinase" + ], + "id": "CDS_2089", + "location": [ + [ + "NC_000913", + 2185301, + "-", + 789 + ] + ], + "md5": "105bb3fe2d87ddb15b1afc7e9edc259d", + "parent_gene": "", + "protein_md5": "0524d22822fb3638d60f55dce358b8e5", + "protein_translation": "MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006964" + ], + [ + "gene_synonym", + "ECK2098" + ], + [ + "gene_synonym", + "EcoGene:EG14070" + ], + [ + "gene_synonym", + "GI:16130043" + ], + [ + "gene_synonym", + "GeneID:947114" + ], + [ + "gene_synonym", + "JW2092" + ], + [ + "gene_synonym", + "NP_416608.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64530" + ], + [ + "gene_synonym", + "b2105" + ], + [ + "gene_synonym", + "rcnR" + ], + [ + "gene_synonym", + "yohL" + ] + ], + "dna_sequence": "ATGTCTCATACAATCCGTGATAAACAGAAACTGAAAGCGCGTGCCAGTAAGATTCAGGGCCAGGTCGTGGCGCTCAAGAAAATGCTCGACGAGCCGCACGAATGCGCTGCAGTTTTACAACAGATTGCTGCTATCCGTGGCGCGGTAAACGGTCTGATGCGGGAAGTGATTAAAGGTCATCTGACGGAACACATCGTTCACCAGGGGGATGAGCTAAAACGTGAAGAAGATCTGGATGTCGTTCTGAAGGTGCTGGATTCATATATCAAATAA", + "dna_sequence_length": 273, + "functions": [ + "transcriptional repressor of rcnA" + ], + "id": "CDS_2090", + "location": [ + [ + "NC_000913", + 2185796, + "-", + 273 + ] + ], + "md5": "adfa108be1335480b8d365530f799170", + "parent_gene": "", + "protein_md5": "9349b0c023e13e5b28da19a2c598a33c", + "protein_translation": "MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006968" + ], + [ + "gene_synonym", + "ECK2099" + ], + [ + "gene_synonym", + "EcoGene:EG14071" + ], + [ + "gene_synonym", + "GI:16130044" + ], + [ + "gene_synonym", + "GeneID:949078" + ], + [ + "gene_synonym", + "JW2093" + ], + [ + "gene_synonym", + "NP_416609.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76425" + ], + [ + "gene_synonym", + "b2106" + ], + [ + "gene_synonym", + "rcnA" + ], + [ + "gene_synonym", + "yohM" + ] + ], + "dna_sequence": "ATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCATCCCCAGCGCCATCTTACTTGGTGCGCTTCATGGCCTGGAACCAGGGCACTCAAAAACGATGATGGCGGCGTTTATCATCGCCATCAAAGGCACCATTAAACAAGCGGTGATGCTCGGACTGGCAGCAACTATTTCGCATACCGCAGTGGTCTGGTTAATTGCCTTTGGCGGGATGGTGATCAGCAAGCGCTTTACTGCTCAATCAGCAGAACCGTGGCTCCAGCTGATTTCCGCAGTGATCATTATTAGCACCGCGTTCTGGATGTTCTGGCGTACCTGGCGCGGCGAACGCAACTGGCTGGAGAATATGCACGGGCATGATTATGAGCATCATCATCACGATCACGAACATCACCACGACCATGGACATCATCACCATCACGAACATGGCGAGTATCAGGATGCCCATGCACGAGCCCATGCCAATGACATTAAACGACGCTTTGATGGTAGAGAGGTCACCAACTGGCAAATTTTGTTATTTGGCTTAACCGGTGGCCTTATCCCCTGCCCGGCAGCAATTACCGTGCTGTTGATATGCATTCAGTTGAAAGCCCTGACACTGGGCGCAACACTGGTCGTCAGTTTCAGCATTGGCCTGGCGTTAACGCTTGTCACCGTAGGCGTTGGCGCAGCAATCAGCGTTCAGCAGGTCGCAAAACGCTGGAGCGGATTTAACACTCTCGCTAAACGCGCCCCCTATTTTTCCAGTCTGTTGATTGGCTTAGTCGGTGTGTATATGGGCGTACATGGCTTCATGGGCATAATGCGATAA", + "dna_sequence_length": 825, + "functions": [ + "membrane protein conferring nickel and cobalt resistance" + ], + "id": "CDS_2091", + "location": [ + [ + "NC_000913", + 2185917, + "+", + 825 + ] + ], + "md5": "3ac916182a226f5932dada7a201becc4", + "parent_gene": "", + "protein_md5": "8a00e30fae559dd35309c7313b7ce8f7", + "protein_translation": "MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006970" + ], + [ + "gene_synonym", + "ECK2100" + ], + [ + "gene_synonym", + "EcoGene:EG14072" + ], + [ + "gene_synonym", + "GI:90111387" + ], + [ + "gene_synonym", + "GeneID:949080" + ], + [ + "gene_synonym", + "JW5346" + ], + [ + "gene_synonym", + "NP_416610.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64534" + ], + [ + "gene_synonym", + "b2107" + ], + [ + "gene_synonym", + "rcnB" + ], + [ + "gene_synonym", + "yohN" + ] + ], + "dna_sequence": "ATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGGGACACCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTGCGTAACCTGCCCGCGCCTGATGCCGGGACGCACTGGACCTATATGGGTGGCGCGTACGTGTTGATCAGCGACACCGACGGTAAAATCATTAAAGCCTACGACGGTGAGATTTTTTATCATCGCTAA", + "dna_sequence_length": 339, + "functions": [ + "periplasmic modulator of Ni and Co efflux" + ], + "id": "CDS_2092", + "location": [ + [ + "NC_000913", + 2186960, + "+", + 339 + ] + ], + "md5": "afd2df44e1fe9f332bf1d1ed5ee5a69e", + "parent_gene": "", + "protein_md5": "deff73d1b3ea7c1bcd54d5fb8897eba4", + "protein_translation": "MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006972" + ], + [ + "gene_synonym", + "ECK2101" + ], + [ + "gene_synonym", + "EcoGene:EG11987" + ], + [ + "gene_synonym", + "GI:16130046" + ], + [ + "gene_synonym", + "GeneID:946642" + ], + [ + "gene_synonym", + "JW2095" + ], + [ + "gene_synonym", + "NP_416611.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33340" + ], + [ + "gene_synonym", + "b2108" + ], + [ + "gene_synonym", + "yehA" + ] + ], + "dna_sequence": "ATGGAAATTCGCATAATGCTATTTATATTAATGATGATGGTTATGCCTGTGAGCTATGCGGCATGTTATAGTGAGTTATCTGTTCAGCACAACTTGGTTGTTCAGGGGGATTTTGCACTTACTCAAACACAAATGGCGACATATGAGCATAATTTTAATGATTCGTCATGCGTAAGTACAAATACTATCACCCCTATGAGCCCGTCGGATATTATTGTTGGACTTTATAACGATACCATAAAATTAAATTTACATTTTGAATGGACCAATAAAAACAACATCACGTTGTCAAATAATCAGACCAGTTTCACCAGTGGTTATTCAGTTACGGTGACACCTGCGGCCAGTAATGCAAAAGTGAATGTTTCTGCGGGGGGCGGCGGTTCAGTGATGATTAATGGTGTTGCGACATTATCCAGTGCTTCATCATCGACACGCGGGAGTGCCGCAGTACAATTTCTACTGTGTTTATTAGGTGGCAAGTCATGGGATGCATGTGTAAATAGCTACAGAAATGCATTGGCACAAAATGCAGGTGTCTATTCCTTTAATCTGACATTGTCATACAACCCGATAACCACAACCTGCAAACCGGACGATTTATTAATTACTTTAGACAGTATTCCCGTTTCACAATTACCAGCCACAGGTAACAAAGCAACAATAAATAGTAAACAAGGGGATATTATTCTGCGTTGTAAAAATTTATTAGGTCAACAAAATCAAACATCACGGAAAATGCAGGTGTATTTATCAAGTTCTGACTTGTTAACCAACAGCAACACAATACTGAAAGGTGCGGAAGATAATGGCGTAGGATTTATTCTTGAAAGTAATGGTTCGCCAGTCACACTTTTAAATATCACTAACAGCAGTAAAGGATATACAAATTTAAAGGAAGTTGCGGCGAAGTCAAAACTTACAGATACAACGGTTTCAATTCCGATAACAGCCAGTTACTACGTCTACGATACAAACAAAGTTAAATCTGGCGCACTGGAGGCAACCGCATTAATCAACGTGAAATACGACTAA", + "dna_sequence_length": 1035, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2093", + "location": [ + [ + "NC_000913", + 2188414, + "-", + 1035 + ] + ], + "md5": "7c184df1050a18909fa223eecff2ba2a", + "parent_gene": "", + "protein_md5": "9e054cb9298baaed14f5649ac84de363", + "protein_translation": "MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQMATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGGKSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSPVTLLNITNSSKGYTNLKEVAAKSKLTDTTVSIPITASYYVYDTNKVKSGALEATALINVKYD", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006974" + ], + [ + "gene_synonym", + "ECK2102" + ], + [ + "gene_synonym", + "EcoGene:EG11988" + ], + [ + "gene_synonym", + "GI:16130047" + ], + [ + "gene_synonym", + "GeneID:946617" + ], + [ + "gene_synonym", + "JW2096" + ], + [ + "gene_synonym", + "NP_416612.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33341" + ], + [ + "gene_synonym", + "b2109" + ], + [ + "gene_synonym", + "yehB" + ] + ], + "dna_sequence": "ATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGCAGCTGAAGAAACCTTTGATACCCATTTTATGATAGGTGGAATGAAAGACCAGCAGGTTGCAAATATTCGTCTTGATGATAATCAACCCTTACCGGGGCAGTATGACATCGATATTTATGTCAATAAGCAATGGCGCGGGAAATATGAGATTATTGTTAAAGACAACCCGCAAGAAACATGTTTATCAAGAGAAGTTATCAAGCGGTTAGGCATTAATAGCGATAACTTCGCCAGCGGTAAGCAATGTTTAACATTTGAGCAACTTGTTCAGGGTGGGAGCTATACCTGGGATATCGGGGTTTTTCGTCTCGATTTCAGTGTCCCGCAGGCCTGGGTGGAAGAACTGGAAAGTGGCTATGTTCCACCGGAAAACTGGGAGCGGGGTATTAATGCGTTTTATACCTCTTATTATCTGAGTCAGTATTACAGCGACTATAAAGCGTCGGGTAATAACAAGAGTACATATGTACGTTTTAACAGCGGGTTAAATTTACTGGGGTGGCAACTGCATTCTGATGCCAGTTTCAGTAAAACAAATAACAATCCAGGGGTGTGGAAAAGCAATACCCTGTATCTGGAACGTGGATTTGCCCAACTTCTCGGCACGCTTCGCGTGGGTGATATGTACACATCAAGCGATATTTTTGATTCTGTTCGCTTCAGAGGTGTGCGGTTGTTTCGTGATATGCAGATGTTGCCTAACTCGAAACAAAATTTTACGCCACGGGTGCAGGGGATTGCTCAGAGTAACGCGCTGGTAACTATTGAACAGAATGGTTTTGTGGTTTATCAGAAAGAGGTTCCTCCTGGCCCGTTCGCGATTACAGATTTGCAGTTGGCCGGTGGTGGAGCAGATCTTGATGTCAGCGTGAAAGAGGCGGACGGCTCGGTAACCACCTATCTGGTGCCTTATGCAGCGGTGCCAAATATGCTGCAACCCGGCGTGTCGAAATATGATTTAGCGGCGGGTCGTAGCCATATTGAAGGGGCGAGCAAACAAAGTGATTTTGTCCAGGCGGGTTATCAGTATGGTTTTAATAATTTATTGACGCTGTATGGTGGCTCGATGGTCGCGAATAATTATTACGCGTTTACTTTGGGGGCTGGCTGGAATACACGCATTGGTGCCATTTCCGTCGATGCCACTAAGTCGCATAGTAAACAAGACAACGGCGATGTGTTTGACGGGCAAAGTTATCAAATTGCCTACAACAAATTTGTGAGCCAAACGTCGACGCGTTTTGGTCTGGCGGCCTGGCGTTATTCGTCGCGTGATTACCGGACATTTAACGATCACGTTTGGGCAAACAATAAAGATAATTATCGCCGTGATGAAAACGATGTCTATGACATTGCCGATTATTACCAGAACGATTTTGGCCGCAAAAATAGCTTTTCCGCCAATATGAGCCAGTCATTGCCAGAAGGTTGGGGGTCTGTGTCATTAAGTACGTTATGGCGAGATTACTGGGGGCGTAGCGGCAGTAGTAAGGATTATCAGTTGAGTTATTCCAACAACCTGCGACGGATAAGCTATACCCTCGCGGCAAGCCAGGCTTATGACGAGAATCATCATGAAGAGAAACGTTTTAATATTTTTATATCGATTCCCTTTGATTGGGGTGATGACGTTTCGACGCCTCGTCGGCAAATATATATGTCTAACTCAACGACGTTTGATGATCAGGGGTTTGCCTCAAATAATACGGGATTATCAGGAACAGTAGGGAGTCGGGATCAGTTCAATTATGGTGTCAACCTGAGTCATCAACATCAGGGAAATGAAACGACAGCTGGGGCGAATTTGACCTGGAACGCGCCGGTTGCGACAGTGAATGGCAGTTATAGTCAGTCGAGTACTTATCGACAGGCTGGAGCCAGTGTTTCAGGGGGCATTGTCGCCTGGTCGGGTGGCGTTAATCTGGCGAACCGTCTTTCCGAAACGTTTGCTGTGATGAATGCGCCAGGAATTAAAGATGCTTATGTCAATGGGCAAAAATATCGCACAACAAACCGTAATGGAGTGGTGATATACGACGGAATGACACCTTATCGGGAAAATCACCTGATGCTGGATGTGTCGCAAAGCGATAGCGAAGCAGAATTACGTGGCAACCGGAAAATTGCCGCCCCTTATCGCGGCGCGGTTGTACTGGTTAATTTTGATACCGATCAGCGCAAGCCATGGTTTATAAAAGCGTTAAGAGCAGATGGGCAATCATTAACGTTTGGTTATGAAGTCAATGATATCCATGGTCATAATATTGGCGTTGTCGGCCAGGGAAGTCAGTTATTTATTCGCACCAATGAAGTACCGCCATCGGTTAATGTGGCAATTGATAAGCAACAAGGACTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAGAAATTATATTTGCCAGTAA", + "dna_sequence_length": 2481, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_2094", + "location": [ + [ + "NC_000913", + 2190910, + "-", + 2481 + ] + ], + "md5": "0ead6af6a222babb2e5aca1b543c668f", + "parent_gene": "", + "protein_md5": "a6d0c05cdefc4bc4732b7fadf4ad3eb9", + "protein_translation": "MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYLSQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPFDWGDDVSTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ", + "protein_translation_length": 826, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006978" + ], + [ + "gene_synonym", + "ECK2103" + ], + [ + "gene_synonym", + "EcoGene:EG11989" + ], + [ + "gene_synonym", + "GI:16130048" + ], + [ + "gene_synonym", + "GeneID:946621" + ], + [ + "gene_synonym", + "JW2097" + ], + [ + "gene_synonym", + "NP_416613.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33342" + ], + [ + "gene_synonym", + "b2110" + ], + [ + "gene_synonym", + "yehC" + ] + ], + "dna_sequence": "ATGGCCGCTATCCCATGGCGGCCTTTTAATTTAAGAGGCATTAAAATGAAAGGATTATTATCTTTACTCATTTTTTCTATGGTCCTTCCTGCACATGCCGGAATTGTTATCTACGGGACGCGCATTATTTACCCGGCAGAAAATAAAGAAGTGATGGTGCAGTTGATGAACCAGGGAAACCGTTCTTCGCTGCTGCAGGCGTGGATTGATGATGGCGATACGTCATTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGGGCAAATTCCGGGCAGCAAGTAAAAATCAAAATTATGCCGAATAAACTGCCCACTAATAAAGAAAGCATTTTTTATCTGAATGTTCTGGATATTCCACCAAATAGTCCAGAGCAAGAAGGTAAGAATGCACTGAAGTTTGCGATGCAAAACAGAATTAAGTTGTTTTACCGGCCAGCGGGTATTGCTCCGGTAAATAAAGCGACATTTAAAAAATTGCTGGTAAATCGCAGTGGCAATGGTTTGGTGATAAAAAATGACTCAGCTAATTGGGTGACGATTTCGGATGTCAAAGCTAATAATGTCAAAGTCAATTATGAAACTATTATGATTGCCCCCTTAGAAAGTCAGAGTGTTAATGTCAAAAGTAATAATGCAAATAACTGGCATCTGACCATTATCGATGACCATGGCAACTATATTAGTGACAAAATTTAA", + "dna_sequence_length": 720, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_2095", + "location": [ + [ + "NC_000913", + 2191645, + "-", + 720 + ] + ], + "md5": "b61c5dacf18297f422943e3b4854bbea", + "parent_gene": "", + "protein_md5": "ff30404b087f6dce02e59d0bf35809ad", + "protein_translation": "MAAIPWRPFNLRGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006980" + ], + [ + "gene_synonym", + "ECK2104" + ], + [ + "gene_synonym", + "EcoGene:EG11990" + ], + [ + "gene_synonym", + "GI:16130049" + ], + [ + "gene_synonym", + "GeneID:946619" + ], + [ + "gene_synonym", + "JW2098" + ], + [ + "gene_synonym", + "NP_416614.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33343" + ], + [ + "gene_synonym", + "b2111" + ], + [ + "gene_synonym", + "yehD" + ] + ], + "dna_sequence": "ATGAAACGTTCAATTATTGCTGCCGCTGTCTTTTCTTCTTTTTTTATGAGCGCTGGAGTATTTGCTGCAGACGTTGATACCGGAACATTAACTATTAAGGGGAATATTGCAGAATCTCCGTGTAAATTCGAAGCGGGTGGTGATTCAGTAAGTATTAATATGCCGACTGTACCAACCAGTGTCTTTGAAGGTAAAGCTAAATATTCTACCTATGATGATGCAGTCGGTGTAACCAGCAGCATGTTAAAAATTAGCTGCCCGAAAGAAGTTGCTGGTGTAAAACTCTCGTTGATTACCAACGATAAAATAACCGGTAACGATAAGGCGATAGCCAGTAGCAACGATACCGTGGGTTACTATCTCTATTTAGGTGATAACAGCGATGTCCTGGATGTTTCTGCACCTTTTAACATTGAGAGTTATAAAACAGCGGAAGGTCAATATGCTATTCCGTTTAAAGCAAAATACCTGAAACTGACAGATAACTCAGTGCAATCAGGTGATGTGTTATCTTCTCTGGTTATGCGTGTGGCGCAGGATTAA", + "dna_sequence_length": 543, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2096", + "location": [ + [ + "NC_000913", + 2192222, + "-", + 543 + ] + ], + "md5": "8508dd629a2aa46a345f8a2b76b59559", + "parent_gene": "", + "protein_md5": "f575c7cf00a35e8e77941d05f3aef7a8", + "protein_translation": "MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006984" + ], + [ + "gene_synonym", + "ECK2105" + ], + [ + "gene_synonym", + "EcoGene:EG11991" + ], + [ + "gene_synonym", + "GI:16130050" + ], + [ + "gene_synonym", + "GeneID:946615" + ], + [ + "gene_synonym", + "JW2099" + ], + [ + "gene_synonym", + "NP_416615.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33344" + ], + [ + "gene_synonym", + "b2112" + ], + [ + "gene_synonym", + "yehE" + ] + ], + "dna_sequence": "ATGAATAAGTATTGGCTGTCAGGAATTATTTTTCTTGCCTATGGATTGGCTTCTCCCGCATTCTCTTCAGAGACTGCCACATTAGCGATTAATGGCAGGATCAGTCCCCCAACATGCAGTATGGCTATGGTTAATGGTCAACCTCAACAGCATTGTGGTCAGTTAACGTATAATGTTGACACCCGTCATCTGTTTTCTTCGCCCGTCAAAGGTGTAACGACAGAAGTGGTTGTTGCAGGTAGCGATAGCAAACGTCGAATCGTGTTAAATCGCTACGATTAA", + "dna_sequence_length": 282, + "functions": [ + "DUF2574 family protein" + ], + "id": "CDS_2097", + "location": [ + [ + "NC_000913", + 2192796, + "-", + 282 + ] + ], + "md5": "5cc53c04be461fe87ba561e8cb1a41e6", + "parent_gene": "", + "protein_md5": "514eb4d6bbe43a7c253e4501aa7a81ad", + "protein_translation": "MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMVNGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006987" + ], + [ + "gene_synonym", + "ECK2106" + ], + [ + "gene_synonym", + "EcoGene:EG10611" + ], + [ + "gene_synonym", + "GI:90111388" + ], + [ + "gene_synonym", + "GeneID:946627" + ], + [ + "gene_synonym", + "JW2100" + ], + [ + "gene_synonym", + "NP_416616.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF08" + ], + [ + "gene_synonym", + "apbC" + ], + [ + "gene_synonym", + "b2113" + ], + [ + "gene_synonym", + "mrp" + ] + ], + "dna_sequence": "ATGAACGAACAATCCCAGGCCAAATCACCAGAAGCCTTGCGCGCAATGGTCGCCGGGACACTGGCCAATTTTCAGCACCCAACCCTGAAGCATAACCTCACCACGCTGAAAGCGTTGCACCATGTCGCCTGGATGGACGACACGTTGCATGTGGAACTGGTTATGCCGTTTGTCTGGCATAGCGCGTTCGAAGAGTTAAAAGAGCAATGTAGCGCCGAACTGCTGCGCATCACCGGGGCGAAAGCTATCGACTGGAAACTGTCGCATAACATAGCCACTCTGAAACGCGTGAAGAATCAGCCGGGAATTAACGGTGTGAAGAACATTATCGCGGTGAGTTCCGGTAAAGGCGGCGTGGGTAAATCGTCCACGGCGGTAAACCTGGCACTGGCGCTGGCGGCAGAAGGGGCGAAAGTCGGCATTCTGGACGCCGATATCTACGGCCCATCAATCCCAACAATGTTGGGCGCAGAAAATCAGCGTCCAACTTCGCCGGACGGTACCCATATGGCACCGATTATGTCTCATGGCCTGGCAACCAATTCAATTGGTTATCTGGTCACTGACGACAATGCGATGGTGTGGCGTGGACCGATGGCGAGCAAGGCGTTAATGCAGATGTTGCAGGAAACCTTGTGGCCGGATCTCGACTATCTGGTGCTTGATATGCCGCCAGGCACCGGTGACATTCAATTGACGCTGGCGCAAAACATTCCAGTAACCGGTGCAGTCGTGGTCACCACCCCGCAGGACATCGCGCTGATCGATGCGAAAAAAGGCATTGTGATGTTCGAGAAAGTCGAGGTTCCGGTGCTCGGTATTGTCGAGAACATGAGTGTGCATATTTGCAGTAACTGTGGTCACCATGAACCGATTTTCGGTACCGGTGGTGCAGAGAAACTGGCTGAAAAATACCATACACAGCTGCTGGGGCAGATGCCGTTACACATCTCCTTACGTGAGGATCTCGATAAAGGTACGCCAACGGTTATCAGCCGTCCGGAGAGCGAATTTACCGCTATCTACCGCCAGCTGGCTGACCGCGTTGCAGCTCAGCTCTACTGGCAGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAA", + "dna_sequence_length": 1110, + "functions": [ + "antiporter inner membrane protein" + ], + "id": "CDS_2098", + "location": [ + [ + "NC_000913", + 2194168, + "-", + 1110 + ] + ], + "md5": "caae1c2dfc04ba5f53dd40e9ff11ae46", + "parent_gene": "", + "protein_md5": "3a5efd80dc8fbaa7a0757ad4a1d6d1d5", + "protein_translation": "MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006991" + ], + [ + "gene_synonym", + "ECK2107" + ], + [ + "gene_synonym", + "EcoGene:EG10586" + ], + [ + "gene_synonym", + "GI:16130052" + ], + [ + "gene_synonym", + "GeneID:946643" + ], + [ + "gene_synonym", + "JW2101" + ], + [ + "gene_synonym", + "NP_416617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00959" + ], + [ + "gene_synonym", + "b2114" + ], + [ + "gene_synonym", + "metG" + ] + ], + "dna_sequence": "ATGACTCAAGTCGCGAAGAAAATTCTGGTGACGTGCGCACTGCCGTACGCTAACGGCTCAATCCACCTCGGCCATATGCTGGAGCACATCCAGGCTGATGTCTGGGTCCGTTACCAGCGAATGCGCGGCCACGAGGTCAACTTCATCTGCGCCGACGATGCCCACGGTACACCGATCATGCTGAAAGCTCAGCAGCTTGGTATCACCCCGGAGCAGATGATTGGCGAAATGAGTCAGGAGCATCAGACTGATTTCGCAGGCTTTAACATCAGCTATGACAACTATCACTCGACGCACAGCGAAGAGAACCGCCAGTTGTCAGAACTTATCTACTCTCGCCTGAAAGAAAACGGTTTTATTAAAAACCGCACCATCTCTCAGCTGTACGATCCGGAAAAAGGCATGTTCCTGCCGGACCGTTTTGTGAAAGGCACCTGCCCGAAATGTAAATCCCCGGATCAATACGGCGATAACTGCGAAGTCTGCGGCGCGACCTACAGCCCGACTGAACTGATCGAGCCGAAATCGGTGGTTTCTGGCGCTACGCCGGTAATGCGTGATTCTGAACACTTCTTCTTTGATCTGCCCTCTTTCAGCGAAATGTTGCAGGCATGGACCCGCAGCGGTGCGTTGCAGGAGCAGGTGGCAAATAAAATGCAGGAGTGGTTTGAATCTGGCCTGCAACAGTGGGATATCTCCCGCGACGCCCCTTACTTCGGTTTTGAAATTCCGAACGCGCCGGGCAAATATTTCTACGTCTGGCTGGACGCACCGATTGGCTACATGGGTTCTTTCAAGAATCTGTGCGACAAGCGCGGCGACAGCGTAAGCTTCGATGAATACTGGAAGAAAGACTCCACCGCCGAGCTGTACCACTTCATCGGTAAAGATATTGTTTACTTCCACAGCCTGTTCTGGCCTGCCATGCTGGAAGGCAGCAACTTCCGCAAGCCGTCCAACCTGTTTGTTCATGGCTATGTGACGGTGAACGGCGCAAAGATGTCCAAGTCTCGCGGCACCTTTATTAAAGCCAGCACCTGGCTGAATCATTTTGACGCAGACAGCCTGCGTTACTACTACACTGCGAAACTCTCTTCGCGCATTGATGATATCGATCTCAACCTGGAAGATTTCGTTCAGCGTGTGAATGCCGATATCGTTAACAAAGTGGTTAACCTGGCCTCCCGTAATGCGGGCTTTATCAACAAGCGTTTTGACGGCGTGCTGGCAAGCGAACTGGCTGACCCGCAGTTGTACAAAACCTTCACTGATGCCGCTGAAGTGATTGGTGAAGCGTGGGAAAGCCGTGAATTTGGTAAAGCCGTGCGCGAAATCATGGCGCTGGCTGATCTGGCTAACCGCTATGTCGATGAACAGGCTCCGTGGGTGGTGGCGAAACAGGAAGGCCGCGATGCCGACCTGCAGGCAATTTGCTCAATGGGCATCAACCTGTTCCGCGTGCTGATGACTTACCTGAAGCCGGTACTGCCGAAACTGACCGAGCGTGCAGAAGCATTCCTCAATACGGAACTGACCTGGGATGGTATCCAGCAACCGCTGCTGGGCCACAAAGTGAATCCGTTCAAGGCGCTGTATAACCGCATCGATATGAGGCAGGTTGAAGCACTGGTGGAAGCCTCTAAAGAAGAAGTAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCTGACGCTGGATCTCGGCGGTGAAAAACGCAATGTCTTCTCCGGTATTCGTTCTGCTTACCCGGATCCGCAGGCACTGATTGGTCGTCACACCATTATGGTGGCTAACCTGGCACCACGTAAAATGCGCTTCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAA", + "dna_sequence_length": 2034, + "functions": [ + "methionyl-tRNA synthetase" + ], + "id": "CDS_2099", + "location": [ + [ + "NC_000913", + 2194300, + "+", + 2034 + ] + ], + "md5": "757489fbae460f899e2ed4685794f2e0", + "parent_gene": "", + "protein_md5": "da7e0901e1283c067b269c7d371b992b", + "protein_translation": "MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK", + "protein_translation_length": 677, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006997" + ], + [ + "gene_synonym", + "ASAP:ABE-0006999" + ], + [ + "gene_synonym", + "ASAP:ABE-0007001" + ], + [ + "gene_synonym", + "ASAP:ABE-0285100" + ], + [ + "gene_synonym", + "ECK2108" + ], + [ + "gene_synonym", + "EcoGene:EG11992" + ], + [ + "gene_synonym", + "GeneID:2847726" + ], + [ + "gene_synonym", + "JW2102" + ], + [ + "gene_synonym", + "JW5915" + ], + [ + "gene_synonym", + "JW5916" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33345" + ], + [ + "gene_synonym", + "b4499" + ], + [ + "gene_synonym", + "dinO" + ], + [ + "gene_synonym", + "molR" + ], + [ + "gene_synonym", + "sosF" + ], + [ + "gene_synonym", + "yehF" + ], + [ + "gene_synonym", + "yehG" + ], + [ + "gene_synonym", + "yehH" + ] + ], + "dna_sequence": "ATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAGCAAGCGAAGGATAATTCTTTGCAACCTTCCCAAACGGTAACGGGCTCTCTCAAGGTAGCGGACTTATCCACCATTATTCAGGAACAACCCTCTTTCGTAGCAGAAACCCGTGCGCCTGACAAAAATACAGATGCTGTTTTACCGTGGCTGGCGAAAGATATTGCTGTCGTTTTTCCGCCCGAAGTTGTACACACCACGTTAAGTCATCGCCGCTTTCCCGGAGTTCCTGTTCAGCAAGCAGACAAATTGCCCCAATTACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTGAATGACGCCTACGTAAACATTTATCACTGACGGAAGAGTCTCTCTGGCAAAAATGTGCACAAAAACTTATTGCCGCAATTCCACATATTCCAGAATGGCGGCAACCATTAATTGCTTTGTTATTACCCGAAAAACCAGAAATTGCACATGAAATTGCCCAGCGTCTACTGGGGCAAAAAAAATTACCCTCGCTTGAGTGGTTAAAAATAGTGGCGACTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCCGTTCGCATTGACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAATGACAATGCTTATCTCACAACCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCTCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAACACATCACGGTTAGCCATGAAGAAAGTACTACCAACCTGTTGGCAAGGATGGGTTTTCAACGACGGATCGCTGGTACATATATTAAAGCTCCCGAAGCGGTAGTTGAGGCATGGCTAAATGAAGATTATTCAACCTTACTAAGTGAATTTAAGGTGTTTCATTCACCTACCGGGCATTATTGGCAGTTGGGGATTTTGACAACATTGCCGCTGGAGAAAGCAGTAAAAGCATGGAATGCCCTTACCCTATCTCCACATACCGATACCGAATACTCCATGTTACATTTTGGACTCAAAGGGTTACCTGGGTTAGTAAACTCACTTGCACGCTATCCACAAGAAGCCTTGCCCATCACGAATTACTTCGCAGCGAGTGAGCTGGCTCCTGCCGTCGCCCGTGCCTTCAACAAACTGAAAACGCTACGCGAAAACGCCCGTAGCTGGCTGTTGAAATACCCGGAACATGCCCTTACCGGCCTGCTGCCTGCGGCGCTCGGCAAAGCCGGTGAAGCACAGGATAACGCCCGCGCTGCCTTGCGTATGCTTACCGAAAACGGTCATCAGCCATTACTGCAAGAAATCGCCCGACGTTATAACCAGCCGGAAGTAACCGATGCGGTGAACGCTCTGCTTGCGCTCGATCCCTTAGATAATCACCCGACAAAAATCCCCACTCTTCCGGCCTTTTATCAGCCATCGCTCTGGACGCGCCCGGTATTAAAAGCAAATGCCCAATCACTGCCAGATAGCGCCCTCCTCCACCTCGGTGAAATGCTCCGCTTCCCTCAGGAAGAGGCTCTGTATCCGGGATTATTGCAGGTGAAAGACGTCTGTTCCGCCGACTCACTGGCGGGATTTGCCTGGGATCTGTTTACCGCCTGGCAGACCGCTGGCGCGCCGTCGAAAGAGAGTTGGGCGTTCACTGCGTTAGGCGTTCTCGGTAACGATGACACCGCCCGCAAACTGACGCCATTAATACGCGCCTGGCCTGGTGAATCCCAGCATAAACGCGCCACCGTTGGGTTGGATATTCTCGCTGCTATCGGTAGTGATATCGCCCTTATGCAGCTTAACGGCATCGCCCAGAAACTGAAATTCAAAGCATTACAGGAGCGGGCAAAAGAAAAAATTGCCGACATTGCCGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGCTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCACTTAACCCGCCGTCTGATTTGGGGCGTTTATAGCGCCGAAAACCAGCTACTGGCTTGCTTTCGCGTAGCAGAAGATAACAGCTCCAGCACCGCTGACGATGATCTTTTCACCCTGCCGGAAGGCGATATCTCTATCGGCACTCCTCACGTTCTGGAAATATCACCAACGGATGCTGCCGCCTTTGGTCAGCTTTTTGCCGACTACGAACTGCTACCACCGTTCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAAGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGAGCAGCTCTTAAGCAAGCTGTGGCTATGGGAAGGCAAAGCAGAAAGATATGGCTGGGGGAGTAATTCAACACAGGAAGCGCAGTTCTCCGTAATCGATGCCATCACCGCCAGCGAGCTAATTAACGATATTGAAGCCCTGTTTGAATAA", + "dna_sequence_length": 3795, + "id": "CDS_2100", + "location": [ + [ + "NC_000913", + 2196474, + "+", + 2847 + ], + [ + "NC_000913", + 2199322, + "+", + 948 + ] + ], + "md5": "b7474e409cf8018678d216e224e0d553", + "parent_gene": "", + "protein_md5": "c09be9a8946b9e872bab2cda5aa031db", + "protein_translation": "MRHFIYQDEKSHKFRAVEQQGNELHISWGKVGTKGQSQIKSFSDAAAAAKAELKLIAEKVKKGYVEQAKDNSLQPSQTVTGSLKVADLSTIIQEQPSFVAETRAPDKNTDAVLPWLAKDIAVVFPPEVVHTTLSHRRFPGVPVQQADKLPQLRRLACSVSQRDNKTATFDFSACSLEWQNTVAQAISQIDGLKTTQLPSPVMAVLTALEMKCTRYKVREDVMDQIVQEGGLEYATDVIIHLQQIDIEWDYANNVIIILPSGIAPSYLEQYSRFE", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007003" + ], + [ + "gene_synonym", + "ECK2109" + ], + [ + "gene_synonym", + "EcoGene:EG11995" + ], + [ + "gene_synonym", + "GI:16130056" + ], + [ + "gene_synonym", + "GeneID:946649" + ], + [ + "gene_synonym", + "JW2105" + ], + [ + "gene_synonym", + "NP_416621.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33346" + ], + [ + "gene_synonym", + "b2118" + ], + [ + "gene_synonym", + "yehI" + ] + ], + "dna_sequence": "ATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGATCCTCTGGTAGTGACATTGCAGTATCAGGACGAGGATTATGGCTATGGTTATCGCTCAGAAACCTATAACGAATTCGATCTCCGACTGCGTAAGCATCTCTCTCTGGCAGAGGAAAGCTGCTGGCAGCGTTGCGCCGACAAACTCATTGCCGCACTACCAGGAATAAACAAAGTTCGCCGCCCTTTTATTGCGCTGATCCTCCCGGAAAAACCAGAAATAGCCAATGAGTTGGTAGGCCTTGAATGCCCGCGAACTCATTTTCATTCTAAGGAGTGGTTAAAAGTTGTTGCTAATGACCCCACAGCGGTGAGAAAACTCGAACACTACTGGAGCCAGGATATATTTAGCGATCGAGAAGCCAGCTACATGTCGCATGAAAACCACTTCGGCTACGCGGCCTGCGCCGCCCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATAAAGAAGATTGCGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAATACTGGCGTACGCTGTTACAAACGCTGATGGCATCGCAGCCACAACTGGCAGCAGAAGTGATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTATTTCAGCACGGAATCTCTTGCGCAACGCATGGAACAAAAAAGTGGACGAGTTGTATTACAGGAACTGGGTTTTGGGGATGATGTATGGCTGTTTCTGAATTATATACTCCCCGGAAAACTGGATGCTGCACGCAATTCACTCTTTGTTCAGTGGCATTACTACCAGGGGCGGGTTGAAGAGATCCTGAATGGCTGGAACTCCCCGGAAGCACAATTAGCAGAACAGGCGCTCCGCAGCGGTCACATAGAAGCGTTAATTAACATATGGGAAAATGACAACTACTCACATTATCGTCCGGAAAAGAGTGTCTGGAACCTGTATTTATTGGCACAGTTGCCGCGTGAGATGGCTTTGACCTTCTGGCTGCGTATCAATGAGAAAAAGCATCTGTTCGCGGGTGAGGACTATTTTCTCAGTATCCTCGGATTGGATGCGCTACCAGGTCTGCTGTTGGCTTTTTCACATCGTCCAAAAGAAACATTTCCGTTAATTTTAAATTTTGGCGCAACAGAACTGGCGCTGCCTGTTGCCCACGTCTGGCGACGTTTCGCGGCGCAGCGTGATCTGGCTCGCCAGTGGATTTTACAATGGCCGGAACATACGGCTAGTGCACTTATCCCTCTTGTCTTTACCAAACCCAGCGATAATAGCGAAGCCGCATTACTTGCCCTGCGTTTACTGTACGAACAGGGACATGGCGAATTGCTACAAACCGTGGCAAACCGCTGGCAGCGTACAGATGTATGGTCTGCCCTGGAGCAGTTGCTTAAACAGGGTCCAATGGACATTTACCCGGCACGCATTCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGGACGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTAAGTCTCTTTGGTGACGAAAGCACGGCACGGGATCTGACGACACAGATCCTCGCCTGGCCACAAGAAGGCAAATCTGCCCGTGCTGTCAGCGGCCTGAACATCCTTACCCTGATGAATAATGATATGGCGCTGATACAGCTGCATCATATATCGCAACGGGCTAAATCCCGCCCCTTACGTGATAACGCGGCGGAATTTCTTCAGGTGGTCGCAGAAAATCGCGGGCTAAGCCAGGAAGAGCTAGCGGACAGATTAGTCCCAACCCTGGGCCTTGATGATCCGCAGGCGTTGAGTTTTGATTTTGGTCCCCGGCAGTTTACCGTTCGCTTCGATGAAAATCTCAACCCGGTTATCTTTGATCAGCAAAACGTTCGCCAGAAAAGCGTTCCCCGTTTGCGCGCCGATGACGATCAACTGAAAGCGCCCGAGGCACTGGCCCGACTAAAAGGGCTAAAAAAAGATGCTACTCAGGTGAGCAAAAACCTGCTCCCGCGTCTTGAAACGGCCCTACGTACCACCCGACGCTGGTCGCTGGCAGATTTTCATTCTCTGTTTGTTAATCATCCCTTTACCCGTCTGGTTACCCAGCGATTAATATGGGGGGTTTATCCGGCAAATGAACCGCGTTGTTTACTCAAAGCCTTTCGTGTGGCCGCAGAGGGGGAGTTCTGCAATGCGCAAGATGAGCCAATTGACCTGCCTGCGGACGCTCTGATTGGCATTGCCCACCCGTTAGAAATGACAGCAGAAATGCGCAGTGAATTTGCACAGCTTTTTGCCGATTACGAAATTATGCCGCCTTTTCGCCAGTTGTCGCGCCGCACGGTGCTGCTCACACCTGACGAGTCAACCAGTAACAGCCTGACTCGCTGGGAAGGTAAATCCGCTACCGTTGGGCAACTTATGGGAATGCGATACAAAGGCTGGGAGTCAGGCTATGAGGACGCATTTGTCTATAACCTGGGTGAGTACCGGCTGGTCCTTAAGTTTTCACCCGGTTTTAACCACTACAATGTTGATAGCAAAGCGCTAATGAGCTTCCGTTCTCTTCGAGTGTACCGTGACAATAAATCCGTCACTTTTGCCGAACTTGATGTGTTTGATTTGAGTGAGGCGTTAAGCGCACCTGACGTCATTTTCCATTAA", + "dna_sequence_length": 3633, + "functions": [ + "DUF4132 domain-containing protein" + ], + "id": "CDS_2101", + "location": [ + [ + "NC_000913", + 2200279, + "+", + 3633 + ] + ], + "md5": "8997d34f09665d959c39c60836e2b101", + "parent_gene": "", + "protein_md5": "4cfc5ffd71cf432bd073f3d140f46471", + "protein_translation": "MDKELPWLADNAQLELKYKKGKTPLSHRRWPGEPVSVITGSLIQTLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQNDSQQLLDEIVQQEGLEYATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETYNEFDLRLRKHLSLAEESCWQRCADKLIAALPGINKVRRPFIALILPEKPEIANELVGLECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDIFSDREASYMSHENHFGYAACAALLREQGLAAIPRLAMYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFPHATLAALAELLALTEPPARPGYPIIEDKKLPAQQKARDEYWRTLLQTLMASQPQLAAEVMPWLSTQPQSVLKSYLSAPPKPVIDGTDNSNLPEILVSPPWRSKKKMTAPRLDLAPLELTPQVYWQPGEQERLAATEPARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNYILPGKLDAARNSLFVQWHYYQGRVEEILNGWNSPEAQLAEQALRSGHIEALINIWENDNYSHYRPEKSVWNLYLLAQLPREMALTFWLRINEKKHLFAGEDYFLSILGLDALPGLLLAFSHRPKETFPLILNFGATELALPVAHVWRRFAAQRDLARQWILQWPEHTASALIPLVFTKPSDNSEAALLALRLLYEQGHGELLQTVANRWQRTDVWSALEQLLKQGPMDIYPARIPKAPDFWHPQMWSRPRLITNNQTVTNDALEIIGEMLRFTQGGRFYSGLEQLKTFCQPQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSARAVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRLVPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPEALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFTRLVTQRLIWGVYPANEPRCLLKAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLFADYEIMPPFRQLSRRTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWESGYEDAFVYNLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSEALSAPDVIFH", + "protein_translation_length": 1210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285062" + ], + [ + "gene_synonym", + "ECK2110" + ], + [ + "gene_synonym", + "EcoGene:EG11997" + ], + [ + "gene_synonym", + "GI:94541136" + ], + [ + "gene_synonym", + "GeneID:4056035" + ], + [ + "gene_synonym", + "JW2106" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33347" + ], + [ + "gene_synonym", + "YP_588459.1" + ], + [ + "gene_synonym", + "b4541" + ], + [ + "gene_synonym", + "yehK" + ] + ], + "dna_sequence": "ATGATCGTGCAAAAAGAGCTGGTTGCTATTTACGATTATGAGGTCCCTGTACCTGAAGATCCGTTTTCCTTCAGACTTGAGATCCATAAATGCTCTGAATTATTTACAGGTTCCGTCTATCGACTGGAGCGATTCCGGCTACGTCCAACATTTCATCAACGTGATCGAGAAGATGCTGACCCGCTAATAAATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAA", + "dna_sequence_length": 318, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2102", + "location": [ + [ + "NC_000913", + 2203972, + "+", + 318 + ] + ], + "md5": "5a46d1b4df1eeeb900a6592c28f8ee46", + "parent_gene": "", + "protein_md5": "f20a454183135a492393ec3dfe4801da", + "protein_translation": "MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007006" + ], + [ + "gene_synonym", + "ECK2111" + ], + [ + "gene_synonym", + "EcoGene:EG11998" + ], + [ + "gene_synonym", + "GI:90111389" + ], + [ + "gene_synonym", + "GeneID:946656" + ], + [ + "gene_synonym", + "JW5349" + ], + [ + "gene_synonym", + "NP_416623.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33348" + ], + [ + "gene_synonym", + "b2119" + ], + [ + "gene_synonym", + "yehL" + ] + ], + "dna_sequence": "ATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCTGTGTTATACGCCGATGAACTGGCAAAATTAAAACAAAATGATAACGCACCTTGCCCGCCCGGTTGGCAGTTAAGTTTGCCTGCGGCCCGTGCTTTTATCCTTGGCGACGAAGCGCAAAATATCAGCCGTAAAGTGGTGATTAGCCCCTCCGCTGTCGAACGTATGTTAGTCACTCTTGCTACCGGCCGCGGTTTGATGTTGGTGGGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTCCCTGCCCCGCTTTATCAGGGAATGCGCGACGGCAAAATCGTCCGTTTCGAAGAGATAACGCGTACACCGCTGGAAGTGCAGGACTGTCTGTTAGGTATGCTTTCTGACAGGGTGATGACGGGGCCGGAACTCACTGGTGAAGCCAGTCAGCTCTATGCGCGAGAAGGCTTTAATATTATTGCCACTGCCAATACCCGCGATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCGCCCAGGAGTTGGAACTGGTCGCCAGTGCTTCGGCGCGTTTGCTGGCCCATAGCGGTATTCCGCATAAAGTGCCTGACGCGGTACTGGAATTACTGGTCCGCACCTTCCGCGATCTGCGTGCCAACGGCGAAAAGAAAACGTCAATGGATACACTGACAGCGATTATGTCCACCGCTGAAGCCGTGAACGTGGCCCATGCTGTGGGCGTCCGCGCCTGGTTTTTAGCGAATCGCGCGGGGGAGCCTGCCGACCTGGTGGAATGTATTGCCGGAACCATCGTCAAAGATAACGAAGAAGATCGCGCGCGTCTGCGCCGTTACTTCGAACAGCGTGTCGCCACACATAAAGAAGCTCACTGGCAGGCTTATTATCAAGCCCGCCACCGCCTGCCGTGA", + "dna_sequence_length": 1089, + "functions": [ + "putative hexameric AAA+ MoxR family ATPase" + ], + "id": "CDS_2103", + "location": [ + [ + "NC_000913", + 2204596, + "+", + 1089 + ] + ], + "md5": "60ce44118dea7f6ef25a7228f0bd90c7", + "parent_gene": "", + "protein_md5": "43c2db5ea6776659302ee1bfbc263395", + "protein_translation": "MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAARAFILGDEAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTGPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVECIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHRLP", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007008" + ], + [ + "gene_synonym", + "ECK2112" + ], + [ + "gene_synonym", + "EcoGene:EG11999" + ], + [ + "gene_synonym", + "GI:16130058" + ], + [ + "gene_synonym", + "GeneID:946651" + ], + [ + "gene_synonym", + "JW2108" + ], + [ + "gene_synonym", + "NP_416624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33349" + ], + [ + "gene_synonym", + "b2120" + ], + [ + "gene_synonym", + "yehM" + ], + [ + "gene_synonym", + "yehN" + ], + [ + "gene_synonym", + "yehO" + ] + ], + "dna_sequence": "ATGAGCGAGCCGTTAATTGTCGGCATCCGGCATCATAGTCCGGCCTGCGCCCGGCTGGTGAAATCGTTAATCGAAAGCCAGCGGCCACGATACGTGTTGATTGAAGGCCCGGCTGATTTTAATGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTGCCTTGCTGGGCGCAGAGTGAAGAAGAGGACGATTCGCCTGATACGCAAGATGAAAGCCAGGCCTTACTGCTGCGTGCCACCCGCATGGATAACAGCGATACCCTGTGGGATCACTTGTTCGAAGATGAAAGCCAGCAAACTGCATTACCCTCTGCGCTGGCGCACTATTTTGCCCAACTGCGGGGCGACGCCTCCGGCGATGCGCTCAATCGTCAGCGCGAAGCCTTTATGGCCCGCTGGATTGGATGGGCGATGCAGCAAAATAATGGCGACGTGTTAGTTGTCTGCGGTGGCTGGCACGCTCCGGCACTGGCAAAGATGTGGCGCGAATGCCCTCAGAAAATTAACAAGCCAGAATTGCCCTCGCTGGCAGATGCCGTTACAGGTTGTTATCTCACACCCTACAGTGAAAAGCGCCTTGATGTGCTGGCAGGATACCTTTCAGGAATGCCTGCCCCGGTATGGCAAAACTGGTGCTGGCAGTGGGGCTTGCAGAAGGCCGGTGAACAACTGCTAAAAACTATCCTTACCCGTTTGCGCCAGCACAAATTGCCCGCTTCTACCGCGGATATGGCTGCCGCTCATCTGCATGCGATGGCGCTGGCACAGTTGCGCGGTCATACACTACCGTTACGCACTGACTGGCTGGATGCCATAGCAGGCTCGCTGATTAAAGAAGCCCTGAACGCGCCGTTGCCGTGGAGCTATCGCGGCGTTATTCATCCCGATACCGATCCGATTCTGCTAACGTTGATAGACACATTAGCGGGTGACGGATTCGGTAAACTTGCCCCTTCTACGCCACAACCGCCTCTGCCAAAAGATGTCACCTGCGAACTGGAACGTACCGCAATCTCCCTTCCGGCGGAGCTTACCTTAAATCGCTTTACCCCCGATGGGCTGGCGCAAAGTCAGGTGTTACATCGGCTGGCAATACTGGAGATCCCTGGGATTGTACGCCAGCAGGGAAGTACACTGACACTTGCAGGCAACGGTGAAGAACGCTGGAAATTAACCCGCCCGCTTAGCCAGCATGCGGCATTGATTGAGGCCGCCTGTTTTGGTGCCACACTCCAGGAAGCCGCACGCAATAAATTAGAAGCCGATATGCTGGACGCGGGCGGAATCGGCAGTATCACCACATGTCTTAGCCAGGCGGCGTTAGCGGGTCTGGCGTCCTTCAGTCAACAATTACTGGAGCAACTCACACTATTAATCGCCCAGGAAAATCAATTTGCCGAAATGGGCCAGGCGCTGGAAGTGCTTTATGCCTTATGGCGGCTGGATGAAATTAGCGGTATGCAAGGCGCGCAGATATTACAAACGACGTTATGCGCGACTATCGATCGCACGCTGTGGCTGTGTGAATCTAACGGCAGACCGGATGAAAAGGAGTTTCACGCTCACCTGCATAGCTGGCAAGCGCTTTGCCATATTCTGCGCGATCTACATAGCGGCGTTAATTTACCCGGCGTTTCTCTTTCTGCGGCGGTAGCCTTACTGGAGCGACGCAGTCAGGCAATTCATGCCCCGGCGCTGGATCGCGGCGCGGCTCTTGGCGCACTAATGCGTCTGGAACATCCCAACGCCAGTGCCGAAGCGGCGCTGACGATGCTGGCGCAGTTATCCCCGGCACAATCTGGTGAGGCGCTGCACGGTTTGCTGGCGCTGGCCCGCCATCAACTGGCCTGTCAGCCGGCATTTATCGCCGGTTTCAGCAGTCATTTAAATCAACTGAGTGAAGCCGATTTTATTAACGCCCTGCCCGATTTACGCGCGGCGATGGCCTGGCTACCACCACGAGAACGCGGGACGCTGGCGCATCAGGTGCTTGAGCATTATCAACTGGCGCAACTTCCCGTTTCGGCGCTGCAAATGCCGTTGCATTGTCCACCACAGGCCATTGCACATCATCAACAACTCGAACAGCAGGCACTGGCATCGCTGCAAAACTGGGGAGTTTTCCATGTCTGA", + "dna_sequence_length": 2280, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2104", + "location": [ + [ + "NC_000913", + 2205695, + "+", + 2280 + ] + ], + "md5": "71db0868aaedaccbbfaaef1e4b0c3103", + "parent_gene": "", + "protein_md5": "a829b5075216c4a51e52827a7d9c601f", + "protein_translation": "MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFAQLRGDASGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQKINKPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQKAGEQLLKTILTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCATIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVNLPGVSLSAAVALLERRSQAIHAPALDRGAALGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLSEADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHHQQLEQQALASLQNWGVFHV", + "protein_translation_length": 759, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007013" + ], + [ + "gene_synonym", + "ECK2113" + ], + [ + "gene_synonym", + "EcoGene:EG12002" + ], + [ + "gene_synonym", + "GI:16130059" + ], + [ + "gene_synonym", + "GeneID:946652" + ], + [ + "gene_synonym", + "JW5350" + ], + [ + "gene_synonym", + "NP_416625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33352" + ], + [ + "gene_synonym", + "b2121" + ], + [ + "gene_synonym", + "yehP" + ] + ], + "dna_sequence": "ATGTCTGAACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGACGCTTTGTGGGCTGGATGACAACGCCCGGCAGATAGACCACGCGCTGGAGTGGCTGTATGGGCGCGATCCTGAACGGCTCCAGCGTGGTGAACGTTCCGGTGGATTAGGTGGCTCAAATCTCACCACCCCTGAGTGGATCAACAGTATTCACACGCTGTTTCCGCAGCAGGTGATTGAGCGGCTGGAAAGCGATGCCGTGCTGCGCTACGGCATTGAAGATGTGGTGACGAATCTCGACGTGCTGGAACGTATGCAGCCTTCTGAAAGCCTGCTACGCGCTGTTTTGCACACCAAACATCTGATGAACCCCGAAGTACTGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACTCTGCGCGCCAACCTGCAACACTGGCACCCGCAACACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGA", + "dna_sequence_length": 1137, + "functions": [ + "VMA domain putative YehL ATPase stimulator" + ], + "id": "CDS_2105", + "location": [ + [ + "NC_000913", + 2207967, + "+", + 1137 + ] + ], + "md5": "3dd2fdf9fa7aae0f59951d170adbe813", + "parent_gene": "", + "protein_md5": "1ca4fc5cb1e3d5214fb547c4cc5e2462", + "protein_translation": "MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007015" + ], + [ + "gene_synonym", + "ECK2114" + ], + [ + "gene_synonym", + "EcoGene:EG12003" + ], + [ + "gene_synonym", + "GeneID:946654" + ], + [ + "gene_synonym", + "JW2110" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33353" + ], + [ + "gene_synonym", + "b2122" + ], + [ + "gene_synonym", + "yehQ" + ] + ], + "dna_sequence": "ATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCGGAGATCAGCCATGAGAACGACGCTTTAATCGCCACCTTCAGTGACGGTGTCCGTACCCAGCTGGCGAACGGCCAGGCACTGAAAGAGGCTCAGTGCAGTTGCGGGGCCAACGGTATGTGCCGTCATCGCGTGATGCTGGTGTTAAGTTATCAACGACTTTGTGCCACCACTCAGTCTACGGAAAAAGAAGAAGAGTGGGATCCGGCAATCTGGCTGGAAGAACTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACGTCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCGCTGGGTGAGTGAATCGCTACGGCAACTGCGCGCCAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAATTGCGCACAAGAGATGGCCCGGCGCGACAGTATTGGTGAAGTTCCTCCTGTGCCGTGGCGCACGGTCGTTGGCTCTGGCATTGCCGGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCAGGTCATTAGCGGCGAAGGGGAAGATAATGTGCTGACGTTATCATTACCAGCCTCAGCCAGCGCACCTTATGCCGTTGAACGCATGGCGGCGCTTTTGCAACAAACAGACGACCCCGTGTGTCTGGTTTCTGGCTTTGTCAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGAATAACGGTGTTTTGCTTTGCGAACAATTATTCCCCATGCTTCAGCAACAAGGATGA", + "dna_sequence_length": 2001, + "id": "CDS_2106", + "location": [ + [ + "NC_000913", + 2209100, + "+", + 2001 + ] + ], + "md5": "5abbd2d113412b2314fde187ba8b0167", + "parent_gene": "", + "protein_md5": "9c1df2edfbab25a01c32ee6a773d1c12", + "protein_translation": "MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLHNGWRYQEQSAIGQA", + "protein_translation_length": 614, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007018" + ], + [ + "gene_synonym", + "ECK2115" + ], + [ + "gene_synonym", + "EcoGene:EG12004" + ], + [ + "gene_synonym", + "GI:90111391" + ], + [ + "gene_synonym", + "GeneID:949023" + ], + [ + "gene_synonym", + "JW5351" + ], + [ + "gene_synonym", + "NP_416627.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33354" + ], + [ + "gene_synonym", + "b2123" + ], + [ + "gene_synonym", + "yehR" + ] + ], + "dna_sequence": "ATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTGCGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTGACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTGGTGCAACCACCAAAGAAGATGCTGCCAAGACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA", + "dna_sequence_length": 462, + "functions": [ + "lipoprotein, DUF1307 family" + ], + "id": "CDS_2107", + "location": [ + [ + "NC_000913", + 2211225, + "+", + 462 + ] + ], + "md5": "9f96de3d960fcc12d450342b0c31858a", + "parent_gene": "", + "protein_md5": "70e035becaca35b0101d7a06420dd380", + "protein_translation": "MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007021" + ], + [ + "gene_synonym", + "ECK2116" + ], + [ + "gene_synonym", + "EcoGene:EG12005" + ], + [ + "gene_synonym", + "GI:16130062" + ], + [ + "gene_synonym", + "GeneID:949026" + ], + [ + "gene_synonym", + "JW2112" + ], + [ + "gene_synonym", + "NP_416628.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33355" + ], + [ + "gene_synonym", + "b2124" + ], + [ + "gene_synonym", + "yehS" + ] + ], + "dna_sequence": "ATGCTAAGTAACGATATTCTGCGCAGCGTGCGCTACATTTTGAAAGCCAATAATAATGACCTGGTGCGTATTCTGGCGCTGGGTAATGTCGAAGCCACCGCGGAACAGATCGCCGTCTGGCTACGTAAAGAAGACGAAGAGGGTTTTCAGCGTTGTCCGGACATTGTTTTGTCGTCATTCCTCAATGGCCTGATTTATGAAAAACGCGGCAAGGATGAGTCTGCTCCGGCACTGGAGCCGGAACGTCGCATTAATAACAACATCGTGCTGAAAAAATTACGCATCGCGTTTTCGCTGAAAACCGATGACATTCTGGCTATCCTCACCGAACAGCAGTTCCGCGTTTCGATGCCGGAAATTACAGCGATGATGCGCGCACCGGATCATAAAAACTTCCGCGAATGCGGCGATCAATTTTTACGTTATTTTCTGCGTGGACTGGCAGCGCGCCAGCATGTGAAAAAAGGCTAA", + "dna_sequence_length": 471, + "functions": [ + "DUF1456 family protein" + ], + "id": "CDS_2108", + "location": [ + [ + "NC_000913", + 2212196, + "-", + 471 + ] + ], + "md5": "779cb539513054fa394d5ceceff9e558", + "parent_gene": "", + "protein_md5": "7e790bdc7dbdf627c044ae7d61b77adf", + "protein_translation": "MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007023" + ], + [ + "gene_synonym", + "ECK2117" + ], + [ + "gene_synonym", + "EcoGene:EG12006" + ], + [ + "gene_synonym", + "GI:90111392" + ], + [ + "gene_synonym", + "GeneID:949024" + ], + [ + "gene_synonym", + "JW5352" + ], + [ + "gene_synonym", + "NP_416629.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFT5" + ], + [ + "gene_synonym", + "b2125" + ], + [ + "gene_synonym", + "yehT" + ] + ], + "dna_sequence": "ATGATTAAAGTCTTAATTGTCGATGATGAACCGTTAGCACGGGAGAACCTGCGTGTATTTTTGCAGGAGCAGAGCGATATTGAAATCGTTGGAGAGTGTTCAAACGCCGTGGAAGGGATCGGCGCGGTGCATAAACTGCGCCCGGATGTGCTGTTTCTCGATATCCAGATGCCGCGCATCAGTGGTCTGGAAATGGTGGGGATGCTTGACCCGGAACATCGCCCGTATATTGTTTTTCTCACTGCGTTTGACGAATACGCAATTAAAGCCTTTGAAGAACATGCCTTTGATTATCTGCTGAAGCCAATTGATGAAGCGCGACTGGAGAAAACGCTGGCGCGATTGCGTCAGGAGCGCAGCAAGCAGGATGTTTCGCTGTTACCGGAAAATCAACAGGCGCTGAAATTTATCCCTTGTACGGGGCATAGTCGGATTTATTTGCTGCAAATGAAAGATGTGGCATTTGTCAGCAGTCGGATGAGCGGTGTCTACGTTACCAGCCACGAAGGGAAAGAGGGCTTTACCGAATTGACATTACGTACCCTGGAAAGTCGTACACCACTACTGCGCTGCCATCGTCAGTATCTGGTTAACCTCGCGCATTTACAGGAGATTCGTCTGGAAGATAACGGCCAGGCCGAGTTGATTTTGCGTAATGGCTTAACCGTGCCGGTCAGCCGCCGTTATCTGAAAAGCTTAAAAGAGGCGATTGGCCTGTAA", + "dna_sequence_length": 720, + "functions": [ + "putative response regulator in two-component system withYehU" + ], + "id": "CDS_2109", + "location": [ + [ + "NC_000913", + 2212962, + "-", + 720 + ] + ], + "md5": "515a48430e170f2e76023854b9c5f83a", + "parent_gene": "", + "protein_md5": "19ff1b5d6bf0dc49e6340de80d654268", + "protein_translation": "MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007027" + ], + [ + "gene_synonym", + "ECK2118" + ], + [ + "gene_synonym", + "EcoGene:EG12007" + ], + [ + "gene_synonym", + "GI:16130064" + ], + [ + "gene_synonym", + "GeneID:949027" + ], + [ + "gene_synonym", + "JW5353" + ], + [ + "gene_synonym", + "NP_416630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD14" + ], + [ + "gene_synonym", + "b2126" + ], + [ + "gene_synonym", + "yehU" + ] + ], + "dna_sequence": "ATGTACGATTTTAATCTGGTGTTGCTGCTGCTTCAGCAGATGTGCGTTTTTTTAGTCATTGCATGGTTAATGAGTAAAACGCCATTATTCATACCGTTAATGCAGGTCACGGTTCGTCTGCCGCATAAATTTCTCTGCTACATCGTCTTTTCCATCTTCTGCATCATGGGCACCTGGTTTGGGTTGCACATTGACGATTCTATTGCCAATACCCGTGCGATAGGCGCGGTAATGGGCGGCTTACTCGGCGGTCCGGTCGTCGGTGGGCTGGTTGGGCTGACCGGCGGCTTACATCGATATTCGATGGGGGGCATGACCGCGTTAAGTTGCATGATCTCGACCATCGTTGAAGGATTACTCGGTGGCCTGGTACACAGCATCCTGATCCGCCGCGGGCGCACTGATAAAGTCTTTAACCCCATTACCGCCGGTGCCGTCACGTTCGTCGCTGAAATGGTGCAAATGCTGATCATCCTTGCGATCGCCCGACCTTATGAAGATGCGGTGCGTCTGGTGAGTAATATTGCTGCGCCAATGATGGTCACCAATACCGTCGGCGCGGCGCTGTTTATGCGTATATTGCTCGATAAACGCGCGATGTTTGAAAAATACACTTCGGCTTTTTCTGCCACTGCGCTGAAAGTGGCAGCCTCGACGGAAGGCATTTTGCGCCAGGGGTTTAACGAAGTGAACAGCATGAAAGTGGCTCAGGTGCTGTATCAGGAACTGGATATTGGTGCAGTCGCGATTACCGATCGAGAGAAATTGCTGGCCTTTACCGGAATTGGTGACGACCACCATTTACCCGGCAAACCGATTTCTTCAACTTATACTTTAAAAGCGATTGAAACCGGTGAAGTGGTCTACGCTGATGGCAACGAAGTACCTTACCGTTGCTCTTTGCATCCGCAATGCAAACTGGGGTCGACGCTGGTAATTCCGTTGCGTGGTGAAAATCAGCGGGTGATGGGCACCATCAAATTGTATGAAGCCAAAAACCGTTTATTCAGTTCAATCAACCGCACGTTGGGTGAGGGGATTGCGCAATTGCTTTCGGCGCAGATCCTTGCCGGGCAATATGAGCGGCAAAAAGCGATGCTCACCCAGTCAGAGATCAAACTGCTTCACGCCCAGGTGAATCCCCATTTTTTGTTTAATGCGCTTAACACCATTAAAGCGGTGATCCGCCGCGACAGCGAACAGGCCAGCCAGCTGGTGCAGTATCTTTCCACTTTTTTCCGCAAAAACTTAAAGCGGCCTTCGGAGTTTGTTACTCTCGCCGACGAAATTGAACATGTGAATGCTTATCTGCAAATTGAAAAGGCGCGCTTCCAGTCGCGGTTGCAGGTCAACATTGCTATTCCGCAAGAATTATCCCAGCAGCAATTGCCCGCGTTTACCCTGCAACCGATAGTGGAAAACGCCATTAAACATGGGACATCACAACTGCTGGATACAGGGCGAGTGGCAATCAGCGCCCGACGTGAGGGGCAACATTTGATGCTGGAGATCGAAGACAATGCCGGTTTGTATCAACCGGTAACCAATGCCAGTGGGCTGGGGATGAATCTGGTGGATAAGCGTTTACGTGAACGGTTTGGCGATGACTATGGAATAAGCGTCGCCTGTGAGCCTGATAGTTACACCCGAATAACGTTACGACTACCATGGAGGGACGAGGCATGA", + "dna_sequence_length": 1686, + "functions": [ + "inner membrane putative sensory kinase in two-component system with YehT" + ], + "id": "CDS_2110", + "location": [ + [ + "NC_000913", + 2214644, + "-", + 1686 + ] + ], + "md5": "42125b7f7a5e7bd4d986ee00d8135de7", + "parent_gene": "", + "protein_md5": "42f56e489167f808d0238f10719f137e", + "protein_translation": "MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA", + "protein_translation_length": 561, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007030" + ], + [ + "gene_synonym", + "ECK2119" + ], + [ + "gene_synonym", + "EcoGene:EG12008" + ], + [ + "gene_synonym", + "GI:16130065" + ], + [ + "gene_synonym", + "GeneID:949029" + ], + [ + "gene_synonym", + "JW2115" + ], + [ + "gene_synonym", + "NP_416631.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33358" + ], + [ + "gene_synonym", + "b2127" + ], + [ + "gene_synonym", + "mlrA" + ], + [ + "gene_synonym", + "yehV" + ] + ], + "dna_sequence": "ATGGCGCTTTACACAATTGGTGAAGTGGCGTTGCTTTGTGATATTAATCCTGTCACGTTACGCGCGTGGCAGAGGCGTTACGGATTGCTGAAACCGCAACGGACAGACGGCGGTCATCGGCTGTTCAACGATGCCGATATTGACCGGATCCGCGAGATCAAACGCTGGATCGACAACGGCGTGCAGGTCAGCAAAGTTAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGCTGGCGCGATCAGCAAGAAACATTACTGACTTACCTGCAAAGCGGCAATCTACATAGCCTGCGAACGTGGATCAAAGAGCGCGGTCAGGATTACCCCGCCCAGACACTCACCACACATCTGTTTATTCCTCTGCGCCGACGGCTTCAGTGCCAACAACCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGAAAATCGAACCTCCGCCCAACAGCAGCAACTCACCAGTTGGCAAGAACAAGGCCATGATATTTTCCCACTCGGCATTTAA", + "dna_sequence_length": 732, + "functions": [ + "transcriptional activator of csgD and csgBA" + ], + "id": "CDS_2111", + "location": [ + [ + "NC_000913", + 2214866, + "+", + 732 + ] + ], + "md5": "0469c9b99d1d1ecb441e730b2994e582", + "parent_gene": "", + "protein_md5": "9c1d67af1aa8f4d75db0d5795bd5a07e", + "protein_translation": "MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFPLGI", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285063" + ], + [ + "gene_synonym", + "ECK2120" + ], + [ + "gene_synonym", + "EcoGene:EG14426" + ], + [ + "gene_synonym", + "GI:94541117" + ], + [ + "gene_synonym", + "GeneID:1450279" + ], + [ + "gene_synonym", + "JW5354" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EES6" + ], + [ + "gene_synonym", + "YP_588460.1" + ], + [ + "gene_synonym", + "b4542" + ], + [ + "gene_synonym", + "yohO" + ] + ], + "dna_sequence": "ATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAA", + "dna_sequence_length": 108, + "functions": [ + "putative membrane protein" + ], + "id": "CDS_2112", + "location": [ + [ + "NC_000913", + 2215657, + "+", + 108 + ] + ], + "md5": "fbf78720fddbe8925488ca92cf4fd01f", + "parent_gene": "", + "protein_md5": "39afb12f8e36ff9141ee3713e61b64bd", + "protein_translation": "MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007032" + ], + [ + "gene_synonym", + "ECK2121" + ], + [ + "gene_synonym", + "EcoGene:EG12009" + ], + [ + "gene_synonym", + "GI:16130066" + ], + [ + "gene_synonym", + "GeneID:949028" + ], + [ + "gene_synonym", + "JW2116" + ], + [ + "gene_synonym", + "NP_416632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33359" + ], + [ + "gene_synonym", + "b2128" + ], + [ + "gene_synonym", + "yehW" + ] + ], + "dna_sequence": "ATGAAGATGTTGCGCGATCCGCTGTTCTGGCTCATTGCTCTGTTTGTGGCGCTGATTTTCTGGCTGCCTTACAGCCAGCCGCTGTTTGCTGCCTTGTTCCCACAACTGCCACGACCCGTTTATCAGCAAGAAAGTTTTGCAGCTCTGGCACTGGCTCATTTCTGGCTGGTGGGAATTTCGAGTTTGTTTGCGGTGATCATTGGCACTGGTGCCGGAATTGCTGTCACTCGCCCGTGGGGCGCGGAATTTCGCCCACTGGTGGAAACTATTGCCGCCGTTGGACAGACTTTTCCGCCCGTCGCAGTGCTGGCGATCGCCGTTCCGGTGATCGGCTTTGGTCTGCAACCAGCGATTATCGCCTTGATCCTTTACGGTGTGCTGCCCGTCCTGCAGGCGACACTTGCCGGGCTGGGAGCGATTGATGCCAGCGTGACAGAAGTTGCGAAAGGTATGGGAATGAGTCGTGGTCAGCGAGTGCGTAAGGTCGAGCTACCGCTGGCGGCTCCGGTGATTCTGGCGGGCGTGCGAACTTCGGTGATTATCAACATTGGTACGGCGACGATCGCCTCAACGGTAGGGGCCAGCACGCTGGGTACGCCCATCATCATCGGGCTTAGCGGATTTAATACCGCGTATGTGATCCAGGGGGCGTTACTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAA", + "dna_sequence_length": 732, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_2113", + "location": [ + [ + "NC_000913", + 2216476, + "-", + 732 + ] + ], + "md5": "8a7e709b20374743d6b20ac399781ffa", + "parent_gene": "", + "protein_md5": "680021b10403fbf11d7c6fa44e8add86", + "protein_translation": "MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRVRKVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQHAK", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007034" + ], + [ + "gene_synonym", + "ECK2122" + ], + [ + "gene_synonym", + "EcoGene:EG12010" + ], + [ + "gene_synonym", + "GI:16130067" + ], + [ + "gene_synonym", + "GeneID:946659" + ], + [ + "gene_synonym", + "JW2117" + ], + [ + "gene_synonym", + "NP_416633.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33360" + ], + [ + "gene_synonym", + "b2129" + ], + [ + "gene_synonym", + "yehX" + ] + ], + "dna_sequence": "ATGATTGAATTTAGCCATGTCAGCAAACTGTTCGGCGCACAAAAAGCCGTTAACGATCTCAATCTCAATTTTCAGGAAGGGAGTTTTTCGGTGCTGATTGGCACATCTGGCTCCGGCAAATCCACCACCCTGAAAATGATTAACCGCCTGGTGGAGCATGACAGCGGAGAGATCCGCTTTGCCGGAGAAGAAATTCGCTCGCTGCCAGTACTGGAGTTGCGCCGCCGGATGGGCTATGCCATTCAATCTATTGGCCTGTTCCCCCACTGGAGCGTGGCGCAAAACATCGCTACCGTGCCGCAATTACAAAAATGGTCGCGGGCGCGGATTGACGATCGTATCGACGAATTAATGGCGCTACTGGGGCTGGAGTCAAATTTGCGTGAGCGTTATCCGCATCAGCTTTCCGGTGGTCAGCAGCAACGTGTGGGAGTGGCGCGTGCACTGGCTGCCGATCCGCAAGTCTTACTAATGGATGAACCTTTTGGCGCACTGGACCCGGTAACGCGCGGCGCGTTGCAACAAGAGATGACGCGCATTCACCGTTTGCTGGGGCGTACCATTGTGCTGGTCACTCATGATATTGATGAGGCGCTACGGCTGGCAGAACATCTGGTATTGATGGATCACGGTGAAGTAGTGCAGCAGGGCAATCCGCTGACGATGCTGACTCGTCCGGCGAATGATTTTGTCCGCCAGTTTTTTGGACGTAGTGAACTGGGTGTGCGCCTGCTTTCGTTACGTAGTGTGGCGGATTACGTGCGTCGCGAAGAACGAGCAGATGGTGAGGCACTGGCAGAAGAGATGACGCTACGCGATGCGCTCTCTCTGTTTGTTGCGCGGGGATGCGAGGTGCTGCCGGTGGTGAACATGCAGGGCCAGCCTTGCGGCACGCTGCATTTTCAGGATCTGCTGGTGGAGGCGTAA", + "dna_sequence_length": 927, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_2114", + "location": [ + [ + "NC_000913", + 2217407, + "-", + 927 + ] + ], + "md5": "7abdd019e8602e268d91b2381e661b72", + "parent_gene": "", + "protein_md5": "213aa882ca17cd6082f8eb4c042037fb", + "protein_translation": "MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERADGEALAEEMTLRDALSLFVARGCEVLPVVNMQGQPCGTLHFQDLLVEA", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007038" + ], + [ + "gene_synonym", + "ECK2123" + ], + [ + "gene_synonym", + "EcoGene:EG12011" + ], + [ + "gene_synonym", + "GI:16130068" + ], + [ + "gene_synonym", + "GeneID:946660" + ], + [ + "gene_synonym", + "JW2118" + ], + [ + "gene_synonym", + "NP_416634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33361" + ], + [ + "gene_synonym", + "b2130" + ], + [ + "gene_synonym", + "yehY" + ] + ], + "dna_sequence": "GTGACTTATTTCCGTATTAATCCTGTTCTGGCGCTGCTGCTGTTGCTGACGGCAATCGCAGCGGCGCTGCCGTTTATCAGTTACGCGCCTAATCGTTTAGTTTCGGGTGAGGGGCGTCATCTCTGGCAGCTGTGGCCGCAAACGATCTGGATGCTGGTGGGCGTTGGTTGCGCCTGGCTGACGGCCTGTTTTATTCCCGGTAAAAAAGGCAGCATTTGTGCACTCATTCTGGCGCAATTCGTCTTCGTATTGCTGGTGTGGGGAGCTGGAAAGGCGGCGACCCAACTGGCGCAAAATGGCAGTGCGCTGGCGCGTACCAGCCTCGGCAGTGGTTTCTGGCTGGCTGCGGCGCTGGCATTGCTGGCCTGTAGCGATGCCATCCGCCGAATCTCCACGCATCCGCTGTGGCGCTGGTTGTTGCATATGCAGATTGCCATTATTCCGCTGTGGTTGCTGTACTCCGGCACGCTTAACGATCTCTCACTAATGAAAGAATACGCCAACCGTCAGGATGTGTTTGACGACGCGCTGGCACAACATCTGACGTTGCTGTTTGGTGCGGTGCTGCCTGCGTTAGTGATTGGTGTGCCGTTGGGCATCTGGTGCTACTTTTCCACTGCTCGGCAGGGGGCAATTTTTTCTCTGCTCAATGTGATTCAGACCGTGCCTTCGGTGGCGCTCTTTGGCCTGTTGATTGCGCCGCTTGCCGCGCTGGTTACGGCCTTTCCGTGGCTGGGGACGCTCGGCATAGCAGGAACCGGAATGACACCCGCACTGATTGCGCTGGTGCTCTATGCCTTGCTGCCGCTGGTGCGCGGCGTGGTAGTCGGTTTGAACCAGATCCCGCGCGATGTGCTGGAAAGCGCCAGAGCGATGGGGATGAGCGGGGCGCAGCGTTTCCTGCATGTTCAGTTACCGCTGGCGTTACCGGTATTTCTGCGCAGCCTGCGGGTGGTGATGGTGCAAACTGTAGGTATGGCGGTGATTGCGGCGTTAATCGGCGCAGGCGGTTTTGGTGCGCTGGTTTTCCAGGGGCTGCTAAGCAGCGCCATTGATTTAGTGTTGCTGGGGGTGATCCCGGTAATTGTTCTGGCGGTGCTTACCGACGCGCTGTTCGATTTGCTTATCGCACTGCTGAAGGTGAAACGTAATGATTGA", + "dna_sequence_length": 1158, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_2115", + "location": [ + [ + "NC_000913", + 2218557, + "-", + 1158 + ] + ], + "md5": "1d5e5fea718f74c065dd5e3b8c459c7c", + "parent_gene": "", + "protein_md5": "318cbed3e53b7b56bb0869742588af64", + "protein_translation": "MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQLWPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSALARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007040" + ], + [ + "gene_synonym", + "ECK2124" + ], + [ + "gene_synonym", + "EcoGene:EG12012" + ], + [ + "gene_synonym", + "GI:16130069" + ], + [ + "gene_synonym", + "GeneID:946681" + ], + [ + "gene_synonym", + "JW2119" + ], + [ + "gene_synonym", + "NP_416635.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33362" + ], + [ + "gene_synonym", + "b2131" + ], + [ + "gene_synonym", + "osmF" + ], + [ + "gene_synonym", + "yehZ" + ] + ], + "dna_sequence": "ATGCCACTCTTAAAGCTCTGGGCAGGTTCACTGGTTATGTTGGCAGCCGTGAGCCTGCCGCTACAGGCGGCTTCCCCCGTTAAAGTCGGTTCAAAAATCGATACCGAAGGTGCGCTACTCGGCAATATCATTTTGCAGGTGCTGGAAAGCCACGGCGTACCGACGGTGAATAAAGTGCAACTCGGAACGACTCCTGTGGTGCGCGGGGCGATTACTTCCGGTGAACTGGATATCTATCCGGAATATACCGGCAATGGCGCTTTCTTCTTTAAAGATGAAAACGATGCAGCGTGGAAAAACGCGCAGCAAGGTTACGAGAAAGTCAAAAAGCTCGATTCGGAGCACAACAAGTTAATCTGGCTGACGCCCGCGCCTGCAAATAACACCTGGACTATCGCCGTGCGTCAGGATGTGGCAGAGAAAAATAAACTCACTTCGCTTGCCGACCTGAGTCGTTATCTGCAAGAGGGCGGCACCTTCAAACTGGCAGCCTCGGCAGAGTTTATCGAACGCGCCGATGCGTTACCCGCGTTTGAAAAAGCCTATGGCTTTAAGCTCGGTCAGGATCAGTTGCTGTCACTGGCTGGTGGCGACACGGCGGTGACGATCAAAGCCGCTGCCCAGCAAACCTCTGGCGTTAATGCTGCAATGGCTTACGGCACTGACGGCCCGGTAGCGGCGCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGTGAGTCGGTGTTGAGGGAGTATCCGCAAATGGCACAGTGGCTACAGCCAGTCTTCGCCAGCCTCGATGCAAAAACATTGCAGCAACTGAATGCCAGCATTGCTGTGGAAGGACTGGATGCCAAAAAAGTGGCTGCCGACTACCTGAAACAAAAAGGGTGGACGAAGTAA", + "dna_sequence_length": 918, + "functions": [ + "putative ABC transporter periplasmic binding protein" + ], + "id": "CDS_2116", + "location": [ + [ + "NC_000913", + 2219481, + "-", + 918 + ] + ], + "md5": "4c6e35fe020adf094df31ea076580e03", + "parent_gene": "", + "protein_md5": "d572aa6ab6a64fad9282a20959414f10", + "protein_translation": "MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLREYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWTK", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007043" + ], + [ + "gene_synonym", + "ECK2125" + ], + [ + "gene_synonym", + "EcoGene:EG12013" + ], + [ + "gene_synonym", + "GI:16130070" + ], + [ + "gene_synonym", + "GeneID:946682" + ], + [ + "gene_synonym", + "JW2120" + ], + [ + "gene_synonym", + "NP_416636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33363" + ], + [ + "gene_synonym", + "b2132" + ], + [ + "gene_synonym", + "bglX" + ], + [ + "gene_synonym", + "glh" + ], + [ + "gene_synonym", + "yohA" + ] + ], + "dna_sequence": "ATGAAATGGCTATGTTCAGTAGGAATCGCGGTGAGTCTGGCCCTGCAGCCAGCACTGGCGGATGATTTATTCGGCAACCATCCATTAACGCCCGAAGCGCGGGATGCGTTCGTCACCGAACTGCTTAAGAAAATGACAGTTGATGAGAAAATTGGTCAGCTGCGCTTAATCAGCGTCGGCCCGGATAACCCGAAAGAGGCGATCCGCGAGATGATCAAAGACGGTCAGGTTGGGGCGATTTTCAACACCGTAACCCGTCAGGATATCCGCGCCATGCAGGATCAGGTGATGGAATTAAGCCGCCTGAAAATTCCTCTTTTCTTTGCTTACGACGTGCTGCACGGTCAGCGCACGGTGTTCCCGATTAGCCTCGGTCTGGCCTCGTCTTTTAACCTCGATGCAGTGAAAACGGTCGGACGTGTCTCTGCTTATGAAGCGGCAGATGATGGCCTGAATATGACCTGGGCACCGATGGTCGATGTCTCGCGCGATCCGCGCTGGGGACGTGCTTCCGAAGGTTTTGGCGAAGATACGTATCTCACCTCAACAATGGGTAAAACCATGGTGGAAGCGATGCAGGGTAAAAGCCCGGCAGATCGCTACTCGGTGATGACCAGCGTCAAACACTTTGCCGCATACGGCGCGGTAGAAGGCGGTAAAGAGTACAACACCGTCGATATGAGTCCGCAGCGCCTGTTTAATGATTATATGCCGCCGTACAAAGCGGGGCTGGACGCAGGCAGCGGCGCGGTGATGGTGGCGCTGAACTCGCTGAACGGCACGCCAGCCACCTCCGATTCCTGGCTGCTGAAAGATGTTCTGCGCGACCAGTGGGGCTTTAAAGGCATCACCGTTTCCGATCACGGTGCAATCAAAGAGCTGATTAAACATGGCACGGCGGCAGACCCGGAAGATGCGGTGCGCGTGGCGCTGAAATCCGGAATCAACATGAGCATGAGCGACGAGTACTACTCGAAGTATCTGCCTGGGTTGATTAAATCCGGCAAAGTGACGATGGCAGAGCTGGACGATGCTGCCCGCCATGTACTGAACGTTAAATATGATATGGGGTTGTTTAACGACCCATACAGCCATTTGGGGCCGAAAGAGTCTGACCCGGTGGATACCAATGCCGAAAGCCGCCTGCACCGTAAAGAAGCGCGTGAAGTGGCGCGCGAAAGCTTGGTGTTGCTGAAAAACCGTCTCGAAACGTTACCGCTGAAAAAATCGGCCACCATTGCGGTGGTTGGGCCACTGGCGGACAGTAAACGTGACGTGATGGGCAGCTGGTCCGCAGCCGGTGTTGCCGATCAATCCGTGACCGTACTGACCGGGATTAAAAATGCCGTCGGTGAAAACGGTAAAGTGCTGTATGCCAAAGGGGCGAACGTTACCAGTGACAAAGGCATTATCGATTTCCTGAATCAGTATGAAGAAGCGGTCAAAGTCGATCCGCGTTCGCCGCAAGAGATGATTGATGAAGCGGTGCAGACGGCGAAACAATCTGATGTGGTGGTGGCTGTAGTCGGTGAAGCACAGGGGATGGCGCACGAAGCCTCCAGCCGGACCGATATCACTATTCCGCAAAGCCAACGTGACTTGATTGCGGCGCTGAAAGCCACCGGTAAACCGCTGGTGCTGGTGCTGATGAACGGGCGTCCGCTGGCGCTGGTGAAAGAAGATCAGCAGGCTGATGCGATTCTGGAAACCTGGTTTGCGGGGACTGAAGGCGGTAATGCAATTGCCGATGTATTGTTTGGCGATTACAACCCGTCCGGCAAGCTGCCAATGTCCTTCCCGCGTTCTGTCGGGCAGATCCCGGTGTACTACAGCCATCTGAATACCGGTCGCCCGTATAATGCCGACAAGCCGAACAAATACACTTCGCGTTATTTTGATGAAGCTAACGGGGCGTTGTATCCGTTCGGCTATGGGCTGAGCTACACCACTTTCACCGTCTCTGATGTGAAACTTTCTGCGCCGACCATGAAGCGTGACGGCAAAGTGACTGCCAGCGTGCAGGTGACGAACACCGGTAAGCGCGAGGGTGCCACGGTAGTGCAGATGTACTTGCAGGATGTGACGGCTTCCATGAGTCGCCCTGTGAAACAGCTGAAAGGCTTTGAGAAAATCACCCTGAAACCGGGCGAAACTCAGACTGTCAGCTTCCCGATCGATATTGAGGCGCTGAAGTTCTGGAATCAACAGATGAAATATGACGCCGAGCCTGGCAAGTTCAATGTCTTTATCGGCACTGATTCCGCACGCGTTAAGAAAGGCGAGTTTGAGTTGCTGTAA", + "dna_sequence_length": 2298, + "functions": [ + "beta-D-glucoside glucohydrolase, periplasmic" + ], + "id": "CDS_2117", + "location": [ + [ + "NC_000913", + 2221989, + "-", + 2298 + ] + ], + "md5": "cebff8996a2176fab65e9eaf97007918", + "parent_gene": "", + "protein_md5": "e68ffefc2094b23fdfa3dea8e02ec7ca", + "protein_translation": "MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL", + "protein_translation_length": 765, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007048" + ], + [ + "gene_synonym", + "ECK2126" + ], + [ + "gene_synonym", + "EcoGene:EG10231" + ], + [ + "gene_synonym", + "GI:16130071" + ], + [ + "gene_synonym", + "GeneID:946653" + ], + [ + "gene_synonym", + "JW2121" + ], + [ + "gene_synonym", + "NP_416637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06149" + ], + [ + "gene_synonym", + "b2133" + ], + [ + "gene_synonym", + "dld" + ] + ], + "dna_sequence": "ATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGTCCACCGCGTTCGTGATATTGAAGCCGACACGCCCGCACGTTATAACGCCGATCCTGATCGGTTATTTGAATCTTCTGGTTGCGCCGGGAAGCTGGCGGTCTTTGCAGTACGTCTTGATACCTTCGAAGCGGAAAAAAATCAGCAGGTGTTTTATATCGGCACCAACCAGCCGGAAGTGCTGACCGAAATCCGCCGTCATATTCTGGCTAACTTCGAAAATCTGCCGGTTGCCGGGGAATATATGCACCGGGATATCTACGATATTGCGGAAAAATACGGCAAAGACACCTTCCTGATGATTGATAAGTTAGGCACCGACAAGATGCCGTTCTTCTTTAATCTCAAGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTACCGCCGCGCATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGATGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTATTTCAAACAGGCCGAAGGCGATTTCTTTGTCTGTACGCCGGAGGAAGGCAGCAAAGCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGTCGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGATCGGTAAAACCAGTAAACGGAAAAACTGGCAGGAAGTGGAGTAA", + "dna_sequence_length": 1716, + "functions": [ + "D-lactate dehydrogenase, FAD-binding, NADH independent" + ], + "id": "CDS_2118", + "location": [ + [ + "NC_000913", + 2222185, + "+", + 1716 + ] + ], + "md5": "38767be14afc515e4d7d20a02a473db6", + "parent_gene": "", + "protein_md5": "a5e840582b686cd8ce1e1d13ef92c2f3", + "protein_translation": "MSSMTTTDNKAFLNELARLVGSSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVHALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKNWQEVE", + "protein_translation_length": 571, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007050" + ], + [ + "gene_synonym", + "ECK2127" + ], + [ + "gene_synonym", + "EcoGene:EG12015" + ], + [ + "gene_synonym", + "GI:162135905" + ], + [ + "gene_synonym", + "GeneID:946662" + ], + [ + "gene_synonym", + "JW5355" + ], + [ + "gene_synonym", + "NP_416638.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI5" + ], + [ + "gene_synonym", + "b2134" + ], + [ + "gene_synonym", + "pbpG" + ], + [ + "gene_synonym", + "psv" + ], + [ + "gene_synonym", + "yohB" + ] + ], + "dna_sequence": "ATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCAGCCGCTACCACCGCTTCACAACCGGAAATTGCCTCCGGTAGCGCGATGATTGTTGATCTGAATACCAACAAAGTGATCTATTCGAACCACCCGGATCTGGTGCGTCCGATTGCGTCTATCAGCAAATTAATGACCGCGATGGTTGTGCTGGATGCACGACTGCCGCTGGATGAAAAACTAAAAGTGGATATCAGCCAGACGCCGGAGATGAAAGGGGTCTATTCGCGCGTACGACTGAATAGCGAAATCAGCCGTAAAGATATGCTGTTGCTGGCGCTGATGTCTTCAGAAAACCGCGCGGCGGCAAGCCTTGCGCACCATTATCCCGGTGGTTACAAAGCCTTTATTAAGGCAATGAATGCGAAAGCGAAATCGCTCGGAATGAACAACACGCGCTTTGTTGAACCTACCGGATTGTCGGTGCATAACGTTTCAACTGCCCGTGACTTAACCAAACTGCTCATTGCCAGCAAACAATATCCGTTGATCGGGCAGTTAAGTACTACCCGGGAAGATATGGCAACCTTCTCTAATCCGACGTATACGCTGCCGTTCCGCAATACTAATCATCTGGTGTATCGCGATAACTGGAATATTCAGTTAACCAAAACCGGCTTTACCAATGCGGCGGGCCATTGTCTGGTGATGCGTACGGTTATCAATAATAAACCGGTGGCGCTGGTAGTGATGGACGCGTTTGGCAAATATACCCATTTTGCCGATGCCAGCCGCCTGCGTACCTGGATTGAAACCGGTAAAGTGATGCCTGTGCCGGCAGCAGCGTTGAGCTATAAAAAACAAAAAGCCGCCCAAATGGCGGCGGCGGGGCAGACGGCACAGAACGATTAA", + "dna_sequence_length": 933, + "functions": [ + "D-alanyl-D-alanine endopeptidase" + ], + "id": "CDS_2119", + "location": [ + [ + "NC_000913", + 2224870, + "-", + 933 + ] + ], + "md5": "2f0b1b300a0182ab280e26278f228b64", + "parent_gene": "", + "protein_md5": "bd4a08d67c52714fec8b4e9aec6326ef", + "protein_translation": "MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007053" + ], + [ + "gene_synonym", + "ECK2128" + ], + [ + "gene_synonym", + "EcoGene:EG12016" + ], + [ + "gene_synonym", + "GI:90111394" + ], + [ + "gene_synonym", + "GeneID:946666" + ], + [ + "gene_synonym", + "JW5356" + ], + [ + "gene_synonym", + "NP_416639.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD17" + ], + [ + "gene_synonym", + "b2135" + ], + [ + "gene_synonym", + "yohC" + ] + ], + "dna_sequence": "ATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTGAAATGCAGGTGATTAATCGCGAAAACGAAACGATTTCTCACCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCATTGGCACTACACAGATTGGCTGGAATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCTGTCTTGTTTTACGGCGTTATGCTGGCTGGGGTCGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGTAATTATCCGCAGCGTCCGTCACTTGCGCACTGCATGGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGCGGTCTGGTGGCGCTTTATCCACTGGTCTGGTTGTGTGCGCTGGTCGGCACGGTGGCGCTGTTTTACACCGGCTACCTGCTTTACCTTGGTATTCCGAGCTTCCTGAATATCAACAAAGAGGAAGGCCTTAGCTTCTCTAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGTGCTGCTCGCCCTAACCGTTATACTATGGGGCTACGGTTATCGTTTGTTCTAG", + "dna_sequence_length": 588, + "functions": [ + "Yip1 family inner membrane protein" + ], + "id": "CDS_2120", + "location": [ + [ + "NC_000913", + 2225631, + "-", + 588 + ] + ], + "md5": "9046e20e1756807ab62c254bed7c1f7f", + "parent_gene": "", + "protein_md5": "dacf8958b65df1f1a5cefd58154fc07b", + "protein_translation": "MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007059" + ], + [ + "gene_synonym", + "ECK2129" + ], + [ + "gene_synonym", + "EcoGene:EG12017" + ], + [ + "gene_synonym", + "GI:90111395" + ], + [ + "gene_synonym", + "GeneID:946661" + ], + [ + "gene_synonym", + "JW2124" + ], + [ + "gene_synonym", + "NP_416640.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33366" + ], + [ + "gene_synonym", + "b2136" + ], + [ + "gene_synonym", + "yohD" + ] + ], + "dna_sequence": "ATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCATCAGGGGCTATTAAAGTTCCCGCTGGTGGTACTTTCTGTGGCGCTTGGCGGCATGATTGGCGACCAGGTGCTCTATCTGTGCGGGCGGCGGTTTGGCGGCAAGCTGTTACGCCGTTTCTCGAAACATCAGGATAAAATTGAGCGGGCGCAGAAACTTATCCAACGCCATCCGTATCTGTTTGTCATTGGTACGCGCTTTATGTATGGCTTTCGGGTGATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAATCTTTCTGCCGCTGAATATTCTCGGCGCATTTGCCTGGGCGTTGATTTTTACCACTATTGGTTACGCTGGTGGTCAGGTGATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTGAAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTGGGCGTGCGCTGGTGGCTGAAACGACGCGGGAAGAAAAAGCCGGATCATCAGGCGTAA", + "dna_sequence_length": 579, + "functions": [ + "DedA family inner membrane protein" + ], + "id": "CDS_2121", + "location": [ + [ + "NC_000913", + 2225801, + "+", + 579 + ] + ], + "md5": "a034adac4ad03b1595f0eb2a0c581a86", + "parent_gene": "", + "protein_md5": "bd746f031ac35e4941f4f42ebd2ec376", + "protein_translation": "MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007062" + ], + [ + "gene_synonym", + "ECK2130" + ], + [ + "gene_synonym", + "EcoGene:EG12019" + ], + [ + "gene_synonym", + "GI:16130075" + ], + [ + "gene_synonym", + "GeneID:949126" + ], + [ + "gene_synonym", + "JW2125" + ], + [ + "gene_synonym", + "NP_416641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33368" + ], + [ + "gene_synonym", + "b2137" + ], + [ + "gene_synonym", + "yohE" + ], + [ + "gene_synonym", + "yohF" + ] + ], + "dna_sequence": "ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTATTACTGGCGCAGCAGGGGTTTGATATTGGTATTACCTGGCACTCAGATGAAGAAGGGGCAAAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGATCTCGGCAATCTACCAGAAGGGGCACTGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGCATTGATGTGCTGGTGAATAATGCGGGTGCAATGACCAAAGCGCCGTTTCTTGATATGGCTTTTGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTCTTATGCTCGCAAATTGCGGCTCGTCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCGGTACATGAACATACGCCGCTGCCGGATGCCAGCGCCTACACAGCCGCTAAACATGCGCTCGGTGGGTTAACCAAAGCGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCAGTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCCGACGCGGAGCCTTCGATTCCCTTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTGGTGGTGTGGCTTTGTTCGGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGATGGCGGCTTTATGTTGGCGAATCCACAGTTCAACCCAGAATAG", + "dna_sequence_length": 762, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2122", + "location": [ + [ + "NC_000913", + 2227270, + "-", + 762 + ] + ], + "md5": "0c9644b17bfa236d0516c27bcb918c26", + "parent_gene": "", + "protein_md5": "8fa67400b82d23357143c69a2121aca7", + "protein_translation": "MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDGGFMLANPQFNPE", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007067" + ], + [ + "gene_synonym", + "ASAP:ABE-0007071" + ], + [ + "gene_synonym", + "ECK2131" + ], + [ + "gene_synonym", + "EcoGene:EG12020" + ], + [ + "gene_synonym", + "GeneID:949123" + ], + [ + "gene_synonym", + "JW5838" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33369" + ], + [ + "gene_synonym", + "b2139" + ], + [ + "gene_synonym", + "mdtQ" + ], + [ + "gene_synonym", + "yohG" + ], + [ + "gene_synonym", + "yohH" + ] + ], + "dna_sequence": "ATGAATCGTGATTCCTTTTATCCAGCCATCGCCTGTTTTCCGCTGTTACTGATGCTGGCCGGGTGTGCGCCTATGCATGAAACCCGCCAGGCGTTAAGCCAGCAAACGCCCGCTGCACAAGTTGACACCGCATTACCCACGGCGCTGAAAAATGGTTGGCCAGACAGCCAATGGTGGCTGGAGTATCACGATAATCAACTCACTTCCTTAATTAACAATGCACTACAGAACGCACCGGATATGCAGGTGGCTGAACAGCGCATTCAGCTAGCTGAAGCCCAGGCGAAGGCAGTTGCCACTCAGGATGGTCCGCAGATCGACTTTTCGGCGGATATGGAGCGGCAAAAAATGTCGGCAGAAGGCTTAATGGGGCCGTTTGCTCTGAACGATCCGGCCGCAGGTACGACCGGCCCGTGGTACACCAACGGTACTTTTGGCTTAACGGCGGGCTGGCATCTCGATATCTGGGGAAAGAATCGGGCGGAGGTTACTGCCCGCCTGGGTACGGTTAAAGCACGGGCGGCGGAACGCGAGCAAACCCGCCAATTGCTGGCTGGCAGCGTAGCCCGCCTGTACTGGGAGTGGCAAACCCAGGCGGCGTTAAACACGGTCTTGCAGCAAATAGAAAAAGAGCAGAACACCATTATCGCGACCGATCGCCAGCTATATCAGAACGGGATTACTTCTTCAGTTGAAGGTGTGGAAACCGATATTAATGCCAGCAAAACCCGGCAGCAGCTCAACGATGTCGCGGGGAAAATGAAAATTATTGAGGCACGGTTAAGCGCACTTACAAATAACCAGACAAAGTCATTGAAGCTTAAACCGGTCGCGTTGCCGAAAGTGGCAAGCCAGCTTCCTGATGAACTGGGGTACTCCTTACTGGCCCGGCGGGCAGATTTGCAGGCGGCGCACTGGTACGTTGAGTCATCGCTAAGCACCATTGATGCGGCAAAAGCGGCATTTTATCCTGACATCAACCTGATGGCCTTCCTGCAACAGGATGCGTTGCACTTAAGCGATCTGTTCCGTCATTCCGCGCAGCAAATGGGCGTTACGGCAGGCCTGACGCTACCCATTTTCGATAGTGGTCGTCTTAACGCCAATCTCGATATCGCAAAAGCCGAAAGCAACTTGTCTATCGCCAGCTACAACAAAGCGGTGGTTGAAGCGGTGAATGACGTGGCGCGGGCAGCCAGTCAGGTTCAGACACTGGCGGAGAAAAACCAGCATCAGGCGCAAATTGAGCGCGATGCCTTGCGTGTGGTAGGTCTTGCGCAGGCGCGCTTTAACGCGGGCATCATTGCTGGTTCCCGCGTCAGCGAAGCCAGAATCCCCGCGCTGCGTGAGCGGGCCAATGGCCTGTTATTGCAAGGGCAGTGGCTGGATGCCTCCATTCAACTCACTGGTGCGTTGGGCGGGGGGTACAAACGCTGA", + "dna_sequence_length": 1437, + "id": "CDS_2123", + "location": [ + [ + "NC_000913", + 2228758, + "-", + 150 + ], + [ + "NC_000913", + 2228609, + "-", + 1287 + ] + ], + "md5": "5552ccc5b7e66ff575b138b440fdbc5e", + "parent_gene": "", + "protein_md5": "df154592957e94df974b7a98822403d6", + "protein_translation": "MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRADLQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDALRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR", + "protein_translation_length": 478, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4494" + ], + [ + "gene_synonym", + "EcoGene:EG14484" + ], + [ + "gene_synonym", + "GI:226524732" + ], + [ + "gene_synonym", + "GeneID:7751636" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P609" + ], + [ + "gene_synonym", + "YP_002791249.1" + ], + [ + "gene_synonym", + "b4679" + ], + [ + "gene_synonym", + "yohP" + ] + ], + "dna_sequence": "ATGAAAATTATACTCTGGGCTGTATTGATTATTTTCCTGATTGGGCTACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAA", + "dna_sequence_length": 84, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2124", + "location": [ + [ + "NC_000913", + 2228982, + "+", + 84 + ] + ], + "md5": "02d1a105a164c66237965efb787c4ac4", + "parent_gene": "", + "protein_md5": "f904ab5a2ed008d88229cd0dabca5d7b", + "protein_translation": "MKIILWAVLIIFLIGLLVVTGVFKMIF", + "protein_translation_length": 27, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007074" + ], + [ + "gene_synonym", + "ECK2133" + ], + [ + "gene_synonym", + "EcoGene:EG12022" + ], + [ + "gene_synonym", + "GI:16130078" + ], + [ + "gene_synonym", + "GeneID:945458" + ], + [ + "gene_synonym", + "JW2128" + ], + [ + "gene_synonym", + "NP_416645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33371" + ], + [ + "gene_synonym", + "b2140" + ], + [ + "gene_synonym", + "dusC" + ], + [ + "gene_synonym", + "yohI" + ] + ], + "dna_sequence": "ATGCGTGTGTTACTGGCACCGATGGAGGGAGTGCTTGACTCTCTGGTGCGTGAATTGCTGACCGAAGTTAACGACTACGATCTGTGCATCACCGAGTTTGTCCGCGTGGTGGATCAACTGCTGCCGGTAAAAGTCTTTCATCGCATTTGCCCTGAGCTACAAAACGCCAGCCGGACACCATCTGGTACGCTGGTGCGCGTGCAGTTGTTAGGTCAGTTCCCACAATGGCTGGCAGAGAACGCCGCCCGTGCGGTGGAGTTAGGTTCCTGGGGCGTGGATCTCAATTGCGGCTGCCCGTCGAAAACGGTTAACGGTAGCGGCGGCGGGGCGACGTTACTCAAAGATCCTGAACTCATCTACCAGGGTGCAAAAGCGATGCGTGAAGCTGTACCGGCGCATTTGCCCGTCAGCGTGAAAGTGCGTCTGGGCTGGGACAGCGGTGAGAAGAAATTTGAAATCGCCGATGCGGTTCAACAGGCTGGCGCTACGGAGCTGGTGGTGCATGGGCGGACGAAAGAGCAGGGTTACCGCGCGGAGCATATTGACTGGCAGGCGATTGGCGATATTCGCCAGCGGCTGAATATTCCGGTGATTGCCAACGGTGAAATCTGGGACTGGCAGAGCGCGCAACAATGCATGGCGATCAGCGGCTGCGACGCAGTGATGATTGGTCGCGGGGCGCTCAATATTCCCAACCTGAGCCGGGTGGTAAAATATAACGAACCGCGAATGCCGTGGCCGGAGGTGGTTGCTTTGCTGCAAAAATATACCCGTCTGGAAAAGCAGGGCGATACCGGGTTATATCACGTTGCGCGGATTAAACAGTGGTTGAGTTATTTGCGTAAAGAATACGATGAAGCAACGGAATTATTTCAGCATGTTCGGGTGTTGAATAATTCCCCTGATATTGCAAGGGCTATTCAGGCAATTGATATCGAGAAACTCTAA", + "dna_sequence_length": 948, + "functions": [ + "tRNA-dihydrouridine synthase C" + ], + "id": "CDS_2125", + "location": [ + [ + "NC_000913", + 2230385, + "-", + 948 + ] + ], + "md5": "30a99133ee7c5e0d2a1d105bebe7ed03", + "parent_gene": "", + "protein_md5": "a5e5c5aa3a79360423d06fbe0b5e93d7", + "protein_translation": "MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007078" + ], + [ + "gene_synonym", + "ECK2134" + ], + [ + "gene_synonym", + "EcoGene:EG12023" + ], + [ + "gene_synonym", + "GI:16130079" + ], + [ + "gene_synonym", + "GeneID:949127" + ], + [ + "gene_synonym", + "JW2129" + ], + [ + "gene_synonym", + "NP_416646.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60632" + ], + [ + "gene_synonym", + "b2141" + ], + [ + "gene_synonym", + "yohJ" + ] + ], + "dna_sequence": "ATGAGTAAGACACTGAACATTATCTGGCAATATTTACGCGCTTTCGTCCTGATTTATGCCTGCCTGTATGCAGGCATTTTCATTGCTTCCCTGCTACCGGTAACCATTCCGGGCAGCATCATCGGGATGCTGATCCTGTTTGTCCTGCTGGCCTTGCAAATTCTTCCGGCAAAATGGGTCAATCCGGGGTGCTACGTACTGATTCGCTATATGGCGCTATTGTTTGTGCCGATTGGCGTAGGCGTCATGCAATATTTTGATTTGCTCCGCGCACAGTTTGGCCCGGTAGTGGTTTCCTGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGA", + "dna_sequence_length": 399, + "functions": [ + "UPF0299 family inner membrane protein" + ], + "id": "CDS_2126", + "location": [ + [ + "NC_000913", + 2230624, + "+", + 399 + ] + ], + "md5": "1116b51173e818c8b5bdcfafe704fdee", + "parent_gene": "", + "protein_md5": "034812e0808f904f3a4bfabed5cd83dc", + "protein_translation": "MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAVSTLVVFLVVSWSSQLVHGERKVVGQKGSEE", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007080" + ], + [ + "gene_synonym", + "ECK2135" + ], + [ + "gene_synonym", + "EcoGene:EG12024" + ], + [ + "gene_synonym", + "GI:16130080" + ], + [ + "gene_synonym", + "GeneID:949125" + ], + [ + "gene_synonym", + "JW2130" + ], + [ + "gene_synonym", + "NP_416647.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD19" + ], + [ + "gene_synonym", + "b2142" + ], + [ + "gene_synonym", + "yohK" + ] + ], + "dna_sequence": "ATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCCGCAAACTGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAATCAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTTAGTTCGCTAGCGCTGGTGTTATGCGGGATAATTACTTCGCTGATCGCACCGTTCCTTTTCCCGATTATTCTGGCAGTAATGGGCTAA", + "dna_sequence_length": 696, + "functions": [ + "LrgB family inner membrane protein" + ], + "id": "CDS_2127", + "location": [ + [ + "NC_000913", + 2231019, + "+", + 696 + ] + ], + "md5": "35e9318c5164e6bfa47df362cfd67b15", + "parent_gene": "", + "protein_md5": "7fc6198ad0e72c7774675f8752b6dd6b", + "protein_translation": "MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007086" + ], + [ + "gene_synonym", + "ECK2136" + ], + [ + "gene_synonym", + "EcoGene:EG10137" + ], + [ + "gene_synonym", + "GI:16130081" + ], + [ + "gene_synonym", + "GeneID:946663" + ], + [ + "gene_synonym", + "JW2131" + ], + [ + "gene_synonym", + "NP_416648.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABF6" + ], + [ + "gene_synonym", + "b2143" + ], + [ + "gene_synonym", + "cdd" + ] + ], + "dna_sequence": "ATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACAGTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAA", + "dna_sequence_length": 885, + "functions": [ + "cytidine/deoxycytidine deaminase" + ], + "id": "CDS_2128", + "location": [ + [ + "NC_000913", + 2231844, + "+", + 885 + ] + ], + "md5": "3fe1b6d53a480b1433724a5269d43cac", + "parent_gene": "", + "protein_md5": "cde21cad6c214513fc4fc18792eb9152", + "protein_translation": "MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007091" + ], + [ + "gene_synonym", + "ECK2137" + ], + [ + "gene_synonym", + "EcoGene:EG12025" + ], + [ + "gene_synonym", + "GI:16130082" + ], + [ + "gene_synonym", + "GeneID:949003" + ], + [ + "gene_synonym", + "JW2132" + ], + [ + "gene_synonym", + "NP_416649.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFY2" + ], + [ + "gene_synonym", + "b2144" + ], + [ + "gene_synonym", + "sanA" + ], + [ + "gene_synonym", + "sfiX" + ], + [ + "gene_synonym", + "yeiF" + ] + ], + "dna_sequence": "ATGTTAAAGCGCGTGTTCCTCAGCCTGTTAGTCCTGATCGGCTTGCTGCTGTTGACTGTGCTCGGCCTCGATCGCTGGATGAGCTGGAAAACCGCGCCTTATATCTACGACGAATTGCAGGATCTCCCCTACCGCCAGGTCGGTGTGGTGCTCGGAACAGCAAAATATTATCGTACTGGCGTAATTAATCAGTATTATCGCTACCGCATTCAAGGAGCGATTAATGCCTATAACAGCGGTAAGGTAAATTATCTATTACTGAGCGGCGATAACGCATTGCAAAGTTATAATGAGCCGATGACCATGCGCAAAGATTTAATCGCTGCTGGTGTCGACCCATCAGATATTGTTCTCGATTACGCAGGCTTTCGTACGCTGGATTCCATCGTGCGTACACGCAAAGTTTTCGATACTAATGATTTCATTATTATCACCCAACGTTTCCACTGTGAGCGAGCATTATTTATTGCGCTGCATATGGGGATTCAGGCTCAGTGTTATGCCGTACCGTCACCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAG", + "dna_sequence_length": 720, + "functions": [ + "DUF218 superfamily vancomycin high temperature exclusion protein" + ], + "id": "CDS_2129", + "location": [ + [ + "NC_000913", + 2232878, + "+", + 720 + ] + ], + "md5": "3e584aea3b31d01d11543895bfb85046", + "parent_gene": "", + "protein_md5": "925db9b4ad38753374cef75e12d06554", + "protein_translation": "MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007093" + ], + [ + "gene_synonym", + "ECK2138" + ], + [ + "gene_synonym", + "EcoGene:EG14073" + ], + [ + "gene_synonym", + "GI:16130083" + ], + [ + "gene_synonym", + "GeneID:948983" + ], + [ + "gene_synonym", + "JW5359" + ], + [ + "gene_synonym", + "NP_416650.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64536" + ], + [ + "gene_synonym", + "b2145" + ], + [ + "gene_synonym", + "yeiS" + ] + ], + "dna_sequence": "ATGGATGTACAGCAGTTTTTTGTCGTTGCCGTTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGGTGTATGTCTGGCGAGCAAAAAATCCCGGACTCTTTTTCGCTTATATGGTGGCATATATCGGCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTATTTTCTATCGTTAA", + "dna_sequence_length": 240, + "functions": [ + "DUF2542 family protein" + ], + "id": "CDS_2130", + "location": [ + [ + "NC_000913", + 2233600, + "+", + 240 + ] + ], + "md5": "c28399ca0f7a3960090ad9206ede3589", + "parent_gene": "", + "protein_md5": "7927ac49e2e617e4dd7eeba15d52bc70", + "protein_translation": "MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007096" + ], + [ + "gene_synonym", + "ECK2139" + ], + [ + "gene_synonym", + "EcoGene:EG14074" + ], + [ + "gene_synonym", + "GI:16130084" + ], + [ + "gene_synonym", + "GeneID:949049" + ], + [ + "gene_synonym", + "JW2133" + ], + [ + "gene_synonym", + "NP_416651.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76440" + ], + [ + "gene_synonym", + "b2146" + ], + [ + "gene_synonym", + "dpdA" + ], + [ + "gene_synonym", + "preB" + ], + [ + "gene_synonym", + "preT" + ], + [ + "gene_synonym", + "yeiT" + ] + ], + "dna_sequence": "ATGCCGCAACAAAATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAATAATGCCCTCGGTGCCGTTTGTGCCAGAGTGTGCCCGACGGAGAAATTATGCCAAAGCGGTTGTACCCGTGCCGGTGTTGATGCTCCCATTGATATCGGCCGCTTACAGCGTTTTGTTACTGATTTTGAACAACAAACCGGAATGGAAATTTATCAGCCCGGTACTAAAACGCTCGGCAAAGTCGCGATTATTGGCGCAGGTCCTGCCGGATTGCAGGCCAGTGTGACACTGACAAACCAGGGTTATGACGTCACGATTTATGAGAAAGAAGCGCACCCCGGTGGCTGGTTGCGTAACGGTATTCCGCAATTCCGGTTACCGCAATCAGTGCTGGATGCAGAGATCGCCCGTATTGAAAAAATGGGCGTGACCATTAAGTGCAACAACGAAGTCGGTAACACACTCACCCTTGAGCAGCTGAAAGCAGAAAACCGCGCGGTACTGGTCACCGTGGGGTTATCAAGCGGTTCCGGGCTACCGCTGTTTGAGCATAGTGACGTTGAGATTGCCGTCGACTTCTTGCAACGTGCACGACAGGCGCAAGGCGATATCAGCATTCCACAAAGCGCATTAATTATCGGCGGCGGTGATGTCGCGATGGACGTAGCCAGCACGCTGAAAGTTCTCGGCTGTCAGGCGGTAACTTGCGTAGCGCGTGAAGAGTTAGATGAGTTTCCGGCAAGCGAAAAAGAGTTTACCAGCGCCCGGGAGCTGGGCGTTTCGATCATCGATGGATTCACGCCAGTAGCCGTGGAAGGCAATAAAGTCACGTTTAAGCATGTACGGTTATCGGGCGAACTGACGATGGCGGCAGATAAAATTATTCTCGCCGTCGGTCAGCATGCCAGACTAGATGCCTTTGCGGAGTTAGAGCCGCAGCGTAACACCATCAAAACACAAAATTACCAGACCCGCGACCCGCAAGTCTTTGCTGCTGGCGATATTGTTGAGGGTGACAAAACCGTGGTCTATGCCGTGAAAACCGGGAAAGAAGCCGCCGAGGCGATTCATCACTATTTAGAGGGAGCTTGCTCATGTTAA", + "dna_sequence_length": 1239, + "functions": [ + "dihydropyrimidine dehydrogenase, NADH-dependent, subunit N" + ], + "id": "CDS_2131", + "location": [ + [ + "NC_000913", + 2234033, + "+", + 1239 + ] + ], + "md5": "928bf1be1311c5d5c113ed4a07a3f7db", + "parent_gene": "", + "protein_md5": "78b9d6d68e32d8f0062f745586f1af9b", + "protein_translation": "MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007098" + ], + [ + "gene_synonym", + "ECK2140" + ], + [ + "gene_synonym", + "EcoGene:EG11289" + ], + [ + "gene_synonym", + "GI:90111398" + ], + [ + "gene_synonym", + "GeneID:949037" + ], + [ + "gene_synonym", + "JW2134" + ], + [ + "gene_synonym", + "NP_416652.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25889" + ], + [ + "gene_synonym", + "b2147" + ], + [ + "gene_synonym", + "preA" + ], + [ + "gene_synonym", + "yeiA" + ] + ], + "dna_sequence": "ATGTTAACGAAAGATCTTTCGATTACTTTTTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTCTCTTCTTCGCCGGTAGGCAACTGCTATGAGATGTGTGCCAAAGCCTACGACACAGGTTGGGGCGGTGTGGTGTTTAAAACGATCGGCTTTTTTATCGCCAACGAAGTCTCGCCGCGTTTTGATCATCTGGTGAAAGAAGATACCGGTTTTATCGGCTTCAAAAATATGGAGCAGATTGCTGAACATCCGTTGGAAGAGAATCTGGCCGCCCTGCGTCGGCTGAAGGAAGATTACCCGGACAAAGTATTGATCGCTTCGATCATGGGGGAAAATGAGCAGCAATGGGAGGAGCTGGCGCGCCTGGTGCAAGAAGCTGGCGCGGATATGATCGAGTGTAACTTCTCCTGTCCGCAAATGACTTCTCATGCGATGGGTAGCGATGTCGGGCAAAGCCCGGAGCTGGTAGAAAAATATTGTCGGGCAGTGAAACGGGGTTCCACGCTGCCAATGCTGGCGAAGATGACGCCGAATATCGGTGATATGTGCGAAGTGGCGCTGGCGGCGAAGCGCGGCGGCGCAGATGGCATTGCGGCGATTAACACCGTTAAATCCATCACCAATATCGATCTTAATCAGAAAATCGGTATGCCGATCGTTAACGGAAAATCGAGTATTTCCGGATATTCCGGTAAAGCGGTAAAACCGATCGCCCTGCGCTTCATTCAGCAAATGCGCACCCATCCAGAACTGCGCGATTTCCCAATCAGCGGTATCGGCGGCATTGAAACCTGGGAGGATGCGGCTGAGTTTTTATTGCTCGGCGCAGCAACGTTACAGGTGACCACCGGCATCATGCAGTACGGGTATCGGATAGTGGAAGATATGGCAAGCGGGTTGTCGCATTATCTCGCCGATCAGGGATTTGATTCGCTGCAGGAGATGGTAGGTCTGGCGAATAACAATATTGTCCCGGCGGAAGATTTAGACCGCAGTTATATTGTCTATCCCCGTATCAATCTTGATAAATGTGTTGGCTGTGGACGCTGTTATATTTCCTGTTACGACGGCGGTCACCAGGCGATGGAATGGAGCGAGAAAACCCGCACACCGCATTGTAATACCGAGAAATGTGTGGGTTGTCTGCTTTGTGGTCACGTCTGCCCGGTGGGTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAA", + "dna_sequence_length": 1236, + "functions": [ + "dihydropyrimidine dehydrogenase, NADH-dependent, subunit C" + ], + "id": "CDS_2132", + "location": [ + [ + "NC_000913", + 2235265, + "+", + 1236 + ] + ], + "md5": "475ba696e0c5caf8c72b9d2bf8a52442", + "parent_gene": "", + "protein_md5": "d688e00df61ce62d9a13c9976dc2a73d", + "protein_translation": "MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL", + "protein_translation_length": 411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007101" + ], + [ + "gene_synonym", + "ECK2141" + ], + [ + "gene_synonym", + "EcoGene:EG10594" + ], + [ + "gene_synonym", + "GI:16130086" + ], + [ + "gene_synonym", + "GeneID:949039" + ], + [ + "gene_synonym", + "JW2135" + ], + [ + "gene_synonym", + "NP_416653.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23200" + ], + [ + "gene_synonym", + "b2148" + ], + [ + "gene_synonym", + "mglC" + ], + [ + "gene_synonym", + "mglP" + ] + ], + "dna_sequence": "ATGAGTGCGTTAAATAAGAAAAGTTTTCTTACTTACCTGAAAGAGGGCGGTATTTACGTCGTTCTTTTAGTTTTGCTGGCGATTATTATTTTCCAGGACCCAACATTTTTAAGTCTGTTGAACTTAAGTAATATTCTCACCCAGTCATCGGTGCGTATTATTATCGCGCTCGGTGTGGCAGGGTTAATTGTCACCCAGGGGACCGATCTTTCTGCTGGTCGTCAGGTAGGGCTGGCGGCAGTGGTGGCTGCGACATTATTGCAGTCCATGGATAACGCCAACAAAGTGTTCCCGGAAATGGCGACGATGCCGATTGCGCTGGTTATTCTGATTGTCTGTGCCATTGGTGCGGTGATCGGTTTGATCAACGGTCTGATTATCGCTTATCTCAACGTGACGCCGTTCATTACCACGCTCGGCACGATGATCATCGTCTATGGCATCAACTCGCTCTATTACGACTTTGTCGGGGCGTCGCCAATTTCTGGTTTTGACAGTGGCTTCTCTACCTTTGCTCAGGGCTTTGTCGCGCTGGGGAGTTTCCGTCTCTCTTACATCACCTTCTACGCGTTGATTGCGGTGGCGTTCGTCTGGGTGTTGTGGAACAAAACCCGCTTCGGTAAGAACATTTTTGCCATTGGCGGTAACCCGGAAGCGGCAAAAGTATCTGGTGTCAACGTCGGCCTGAACCTGCTGATGATCTACGCGTTGTCTGGCGTGTTCTATGCCTTTGGCGGGATGTTAGAAGCCGGACGTATCGGCTCTGCCACCAACAACCTCGGCTTTATGTATGAGCTGGATGCTATCGCGGCGTGCGTGGTAGGCGGTGTATCGTTCAGCGGCGGTGTGGGGACGGTGATTGGCGTGGTGACCGGGGTAATTATTTTTACCGTCATCAACTATGGCCTGACGTATATCGGCGTAAACCCATACTGGCAGTACATCATCAAAGGGGCGATTATTATCTTCGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGA", + "dna_sequence_length": 1011, + "functions": [ + "methyl-galactoside transporter subunit" + ], + "id": "CDS_2133", + "location": [ + [ + "NC_000913", + 2237753, + "-", + 1011 + ] + ], + "md5": "88824fd23960b5378e90626b00c0fac1", + "parent_gene": "", + "protein_md5": "7456c9822d0da0da2bb0da9cdbe5e842", + "protein_translation": "MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007103" + ], + [ + "gene_synonym", + "ECK2142" + ], + [ + "gene_synonym", + "EcoGene:EG10592" + ], + [ + "gene_synonym", + "GI:16130087" + ], + [ + "gene_synonym", + "GeneID:949036" + ], + [ + "gene_synonym", + "JW2136" + ], + [ + "gene_synonym", + "NP_416654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG8" + ], + [ + "gene_synonym", + "b2149" + ], + [ + "gene_synonym", + "mglA" + ], + [ + "gene_synonym", + "mglP" + ] + ], + "dna_sequence": "ATGGTCAGCTCAACGACTCCGTCCTCCGGGGAATACTTGTTGGAAATGAGCGGTATCAACAAGTCCTTTCCTGGTGTTAAGGCACTTGATAACGTTAATTTAAAAGTCCGGCCACATTCTATCCATGCATTAATGGGGGAAAACGGTGCAGGAAAATCGACATTATTAAAATGCCTGTTTGGTATTTATCAAAAAGACTCCGGCACCATTTTATTCCAGGGTAAAGAGATCGATTTCCATTCTGCAAAAGAAGCCCTGGAAAATGGTATTTCGATGGTACACCAGGAGTTAAACCTGGTATTACAACGTTCGGTGATGGATAACATGTGGCTGGGGCGATATCCCACCAAAGGCATGTTTGTCGATCAGGACAAAATGTACCGCGAAACCAAAGCGATTTTTGACGAACTGGATATTGATATCGATCCGCGTGCGCGCGTCGGCACATTATCCGTTTCGCAAATGCAGATGATCGAAATCGCCAAAGCGTTTTCCTATAACGCGAAAATTGTGATTATGGATGAACCGACTTCTTCGTTAACCGAAAAAGAGGTCAATCATCTGTTCACTATTATTCGTAAATTAAAAGAGCGCGGCTGCGGTATTGTTTATATCTCGCATAAAATGGAAGAAATCTTCCAGTTATGTGATGAAGTTACCGTATTGCGCGACGGTCAGTGGATCGCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGTTGAGACGTTATTTGGTATTCGCGAGAAATCGGCTGGCACCATAACGTTGCACGGCAAACAGATCAATAACCATAATGCCAACGAAGCCATAAACCATGGATTTGCACTGGTAACTGAGGAGCGCCGCTCAACGGGAATTTATGCCTATCTGGATATTGGTTTTAACTCGTTAATTTCCAATATTCGCAACTACAAAAATAAAGTTGGTTTACTGGATAACTCGCGGATGAAAAGCGATACCCAGTGGGTGATTGATTCGATGCGGGTAAAAACGCCGGGTCATCGGACGCAAATTGGTTCGCTCTCCGGTGGTAATCAGCAAAAGGTGATTATTGGTCGCTGGCTACTAACGCAACCAGAAATATTAATGCTCGATGAACCGACGCGCGGTATTGATGTCGGGGCGAAGTTTGAAATTTATCAGTTAATTGCCGAACTGGCGAAGAAAGGCAAGGGGATTATTATTATCTCCTCTGAAATGCCTGAGTTGTTAGGGATAACAGACCGTATTCTGGTCATGAGCAATGGTCTCGTTTCCGGAATTGTCGATACAAAAACAACAACGCAAAACGAAATTCTGCGTCTTGCGTCTTTGCACCTTTAA", + "dna_sequence_length": 1521, + "functions": [ + "methyl-galactoside ABC transporter ATPase" + ], + "id": "CDS_2134", + "location": [ + [ + "NC_000913", + 2239289, + "-", + 1521 + ] + ], + "md5": "793786331ff1ceaf7a37a003191b4db7", + "parent_gene": "", + "protein_md5": "ad359524d743b331868d5956ec1fd6d6", + "protein_translation": "MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007108" + ], + [ + "gene_synonym", + "ECK2143" + ], + [ + "gene_synonym", + "EcoGene:EG10593" + ], + [ + "gene_synonym", + "GI:16130088" + ], + [ + "gene_synonym", + "GeneID:949041" + ], + [ + "gene_synonym", + "JW2137" + ], + [ + "gene_synonym", + "NP_416655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEE5" + ], + [ + "gene_synonym", + "b2150" + ], + [ + "gene_synonym", + "mglB" + ] + ], + "dna_sequence": "ATGAATAAGAAGGTGTTAACCCTGTCTGCTGTGATGGCCAGCATGTTATTCGGTGCCGCTGCACACGCTGCTGATACTCGCATTGGTGTAACAATCTATAAGTACGACGATAACTTTATGTCTGTAGTGCGCAAGGCTATTGAGCAAGATGCGAAAGCCGCGCCAGATGTTCAGCTGCTGATGAATGATTCTCAGAATGACCAGTCCAAGCAGAACGATCAGATCGACGTATTGCTGGCGAAAGGGGTGAAGGCACTGGCAATCAACCTGGTTGACCCGGCAGCTGCGGGTACGGTGATTGAGAAAGCGCGTGGGCAAAACGTGCCGGTGGTTTTCTTCAACAAAGAACCGTCTCGTAAGGCGCTGGATAGCTACGACAAAGCCTACTACGTTGGCACTGACTCCAAAGAGTCCGGCATTATTCAAGGCGATTTGATTGCTAAACACTGGGCGGCGAATCAGGGTTGGGATCTGAACAAAGACGGTCAGATTCAGTTCGTACTGCTGAAAGGTGAACCGGGCCATCCGGATGCAGAAGCACGTACCACTTACGTGATTAAAGAATTGAACGATAAAGGCATCAAAACTGAACAGTTACAGTTAGATACCGCAATGTGGGACACCGCTCAGGCGAAAGATAAGATGGACGCCTGGCTGTCTGGCCCGAACGCCAACAAAATCGAAGTGGTTATCGCCAACAACGATGCGATGGCAATGGGCGCGGTTGAAGCGCTGAAAGCACACAACAAGTCCAGCATTCCGGTGTTTGGCGTCGATGCGCTGCCAGAAGCGCTGGCGCTGGTGAAATCCGGTGCACTGGCGGGCACCGTACTGAACGATGCTAACAACCAGGCGAAAGCGACCTTTGATCTGGCGAAAAACCTGGCCGATGGTAAAGGTGCGGCTGATGGCACCAACTGGAAAATCGACAACAAAGTGGTCCGCGTACCTTATGTTGGCGTAGATAAAGACAACCTGGCTGAATTCAGCAAGAAATAA", + "dna_sequence_length": 999, + "functions": [ + "methyl-galactoside transporter subunit" + ], + "id": "CDS_2135", + "location": [ + [ + "NC_000913", + 2240348, + "-", + 999 + ] + ], + "md5": "c886fc6233f6c9fc80c092bf81fa7b09", + "parent_gene": "", + "protein_md5": "25039a1482469b5f2e4756711abe51d9", + "protein_translation": "MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007110" + ], + [ + "gene_synonym", + "ECK2144" + ], + [ + "gene_synonym", + "EcoGene:EG10365" + ], + [ + "gene_synonym", + "GI:16130089" + ], + [ + "gene_synonym", + "GeneID:949043" + ], + [ + "gene_synonym", + "JW2138" + ], + [ + "gene_synonym", + "NP_416656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25748" + ], + [ + "gene_synonym", + "b2151" + ], + [ + "gene_synonym", + "galS" + ], + [ + "gene_synonym", + "mglD" + ] + ], + "dna_sequence": "ATGATCACCATTCGTGATGTAGCGCGTCAGGCTGGCGTCTCTGTGGCAACGGTTTCCCGGGTGCTCAATAACAGCACGCTGGTCAGTGCCGACACGCGTGAAGCAGTAATGAAAGCCGTGAGTGAGCTGGATTATCGGCCAAACGCCAATGCCCAGGCGCTGGCAACTCAGGTTAGCGACACCATTGGCGTGGTGGTGATGGACGTTTCTGATGCGTTTTTCGGCGCGCTGGTAAAAGCGGTGGATCTGGTCGCTCAGCAGCATCAGAAATACGTGCTAATCGGCAATAGCTATCATGAAGCGGAAAAAGAGCGTCACGCCATTGAGGTGTTAATTCGCCAGCGTTGTAATGCGTTGATTGTTCACTCAAAAGCATTGAGTGACGATGAACTGGCGCAATTTATGGATAACATTCCCGGTATGGTGTTAATCAACCGCGTTGTGCCGGGGTACGCCCATCGTTGCGTTTGCCTGGATAATCTCAGCGGTGCCCGAATGGCGACGCGCATGTTGCTGAATAACGGTCATCAACGTATTGGTTATCTTTCTTCCAGCCACGGCATTGAAGATGACGCCATGCGTAAAGCAGGCTGGATGAGTGCGTTGAAAGAGCAGGATATTATTCCGCCGGAAAGCTGGATTGGCGCTGGTACGCCGGACATGCCGGGCGGTGAGGCGGCGATGGTTGAACTGCTGGGGCGCAATCTACAACTTACCGCTGTATTTGCTTATAACGACAATATGGCCGCTGGCGCACTGACAGCATTAAAAGATAATGGCATTGCGATTCCGTTACATCTCTCAATCATCGGTTTCGATGATATTCCCATCGCCCGTTACACCGACCCGCAATTAACGACCGTGCGTTATCCCATTGCTTCAATGGCGAAATTAGCCACCGAACTGGCCTTGCAGGGGGCAGCAGGCAATATTGATCCTCGTGCCAGCCACTGTTTTATGCCGACGTTAGTGCGTCGCCATTCTGTCGCAACACGCCAGAATGCGGCGGCGATCACTAACTCAACAAATCAGGCGATGTAA", + "dna_sequence_length": 1041, + "functions": [ + "galactose- and fucose-inducible galactose regulon transcriptional isorepressor", + "mgl operon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_2136", + "location": [ + [ + "NC_000913", + 2241668, + "-", + 1041 + ] + ], + "md5": "ebcc05c6e2e58b04f6a308870352dbbf", + "parent_gene": "", + "protein_md5": "4042f243e2a7c9208bd3e6cfe340be7b", + "protein_translation": "MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGAGTPDMPGGEAAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQNAAAITNSTNQAM", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007115" + ], + [ + "gene_synonym", + "ECK2145" + ], + [ + "gene_synonym", + "EcoGene:EG11290" + ], + [ + "gene_synonym", + "GI:16130090" + ], + [ + "gene_synonym", + "GeneID:949044" + ], + [ + "gene_synonym", + "JW2139" + ], + [ + "gene_synonym", + "NP_416657.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25747" + ], + [ + "gene_synonym", + "b2152" + ], + [ + "gene_synonym", + "yeiB" + ] + ], + "dna_sequence": "ATGGAGCGCAACGTCACGCTCGATTTTGTTCGCGGCGTCGCCATTCTGGGGATCCTGCTATTAAACATCAGCGCCTTTGGGCTACCAAAGGCGGCTTATCTCAATCCCGCCTGGTACGGTGCTATTACGCCGCGGGATGCATGGACTTGGGCATTTCTTGATCTCATCGGCCAGGTGAAATTCCTCACGCTTTTTGCGCTACTGTTTGGTGCGGGCCTGCAAATGTTGCTGCCCCGTGGCAGACGCTGGATCCAGTCGCGGTTAACGCTGTTAGTCTTGTTGGGCTTTATTCACGGTTTATTGTTCTGGGACGGCGATATTTTGCTGGCTTACGGGCTGGTGGGCTTAATCTGCTGGCGGCTGGTGCGCGATGCGCCATCGGTAAAAAGCCTGTTTAATACAGGCGTCATGCTTTATCTGGTGGGGCTTGGCGTTTTGCTGTTATTGGGGCTGATTTCCGACAGCCAGACCAGCCGCGCCTGGACGCCGGATGCATCGGCTATTTTGTATGAAAAATACTGGAAGCTTCACGGCGGCGTTGAAGCGATCAGTAATCGTGCCGATGGTGTTGGCAACAGTTTACTGGCACTGGGCGCACAGTATGGCTGGCAACTGGCAGGGATGATGCTCATTGGTGCGGCGCTGATGCGCAGCGGCTGGCTGAAAGGGCAGTTCAGCTTACGTCACTATCGTCGTACTGGTTTTGTGCTGGTGGCGATTGGGGTGACCATTAACCTTCCTGCCATCGCCCTGCAATGGCAGCTGGACTGGGCGTATCGCTGGTGTGCCTTCTTACTTCAAATGCCGCGGGAACTGAGTGCGCCGTTTCAGGCGATTGGCTATGCGTCGCTGTTTTATGGCTTCTGGCCGCAATTGAGCCGCTTTAAGCTGGTGCTTGCGATCGCCTGCGTCGGACGGATGGCGCTGACCAACTATCTATTGCAAACGCTGATTTGTACCACGCTTTTTTACCACCTCGGTTTGTTTATGCATTTTGACCGCCTGGAGCTGCTGGCGTTTGTTATTCCGGTATGGCTGGCGAATATCCTCTTCTCTGTTATCTGGCTGCGTTACTTCCGCCAGGGGCCGGTGGAATGGCTCTGGCGTCAGTTAACTTTGCGTGCTGCCGGACCGGCAATATCTAAAACATCAAGATAA", + "dna_sequence_length": 1158, + "functions": [ + "DUF418 family putative inner membrane protein" + ], + "id": "CDS_2137", + "location": [ + [ + "NC_000913", + 2242967, + "-", + 1158 + ] + ], + "md5": "805cc698e66694e704aa938ba056892b", + "parent_gene": "", + "protein_md5": "4291f1df8f9d0dc081231e46a74cf414", + "protein_translation": "MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007117" + ], + [ + "gene_synonym", + "ECK2146" + ], + [ + "gene_synonym", + "EcoGene:EG11375" + ], + [ + "gene_synonym", + "GI:16130091" + ], + [ + "gene_synonym", + "GeneID:949040" + ], + [ + "gene_synonym", + "JW2140" + ], + [ + "gene_synonym", + "NP_416658.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T5" + ], + [ + "gene_synonym", + "b2153" + ], + [ + "gene_synonym", + "folE" + ] + ], + "dna_sequence": "ATGCCATCACTCAGTAAAGAAGCGGCCCTGGTTCATGAAGCGTTAGTTGCGCGAGGACTGGAAACACCGCTGCGCCCGCCCGTGCATGAAATGGATAACGAAACGCGCAAAAGCCTTATTGCTGGTCATATGACCGAAATCATGCAGCTGCTGAATCTCGACCTGGCTGATGACAGTTTGATGGAAACGCCGCATCGCATCGCTAAAATGTATGTCGATGAAATTTTCTCCGGTCTGGATTACGCCAATTTCCCGAAAATCACCCTCATTGAAAACAAAATGAAGGTCGATGAAATGGTCACCGTGCGCGATATCACTCTGACCAGCACCTGTGAACACCATTTTGTTACCATCGATGGCAAAGCGACGGTGGCCTATATCCCGAAAGATTCGGTGATCGGTCTGTCAAAAATTAACCGCATTGTGCAGTTCTTTGCCCAGCGTCCGCAGGTGCAGGAACGTCTGACGCAGCAAATTCTTATTGCGCTACAAACGCTGCTGGGCACCAATAACGTGGCTGTCTCGATCGACGCGGTGCATTACTGCGTGAAGGCGCGTGGCATCCGCGATGCAACCAGTGCCACGACAACGACCTCTCTTGGTGGATTGTTCAAATCCAGTCAGAATACGCGCCACGAGTTTCTGCGCGCTGTGCGTCATCACAACTGA", + "dna_sequence_length": 669, + "functions": [ + "GTP cyclohydrolase I" + ], + "id": "CDS_2138", + "location": [ + [ + "NC_000913", + 2243652, + "-", + 669 + ] + ], + "md5": "ab4f70f71144a02d1b8f7c419c262afe", + "parent_gene": "", + "protein_md5": "2c242910cb3cdf4137502dac1ebc7215", + "protein_translation": "MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007124" + ], + [ + "gene_synonym", + "ECK2147" + ], + [ + "gene_synonym", + "EcoGene:EG12026" + ], + [ + "gene_synonym", + "GI:16130092" + ], + [ + "gene_synonym", + "GeneID:949045" + ], + [ + "gene_synonym", + "JW2141" + ], + [ + "gene_synonym", + "NP_416659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33018" + ], + [ + "gene_synonym", + "b2154" + ], + [ + "gene_synonym", + "yeiG" + ] + ], + "dna_sequence": "ATGGAAATGCTCGAAGAGCACCGCTGTTTTGAAGGCTGGCAGCAACGCTGGCGACACGACTCCAGTACCTTAAACTGCCCGATGACGTTCAGTATCTTTCTCCCTCCACCTCGTGATCACACTCCGCCACCAGTGCTGTACTGGCTTTCCGGATTAACCTGCAATGACGAGAACTTCACCACCAAGGCGGGTGCCCAGCGGGTAGCGGCGGAACTGGGGATTGTACTGGTGATGCCAGACACCAGCCCGCGCGGCGAAAAGGTTGCCAACGACGATGGCTACGATTTAGGCCAGGGCGCAGGCTTTTATCTTAATGCCACGCAACCGCCGTGGGCGACGCATTACCGGATGTATGATTATCTGCGCGATGAATTACCGGCGCTGGTTCAGTCGCAATTTAATGTCAGCGACCGCTGCGCCATTAGCGGTCACTCAATGGGTGGTCACGGTGCGCTGATTATGGCGCTGAAAAATCCGGGTAAATACACCAGCGTTTCGGCCTTTGCGCCAATTGTGAATCCGTGCAGCGTCCCGTGGGGAATCAAAGCGTTTAGCAGCTATTTAGGTGAGGACAAAAATGCATGGCTGGAATGGGACAGTTGCGCACTGATGTATGCCAGTAACGCGCAGGATGCGATCCCGACGCTTATCGATCAGGGCGATAATGATCAGTTTCTTGCCGACCAGTTGCAACCTGCGGTACTGGCAGAAGCCGCGCGCCAGAAAGCGTGGCCGATGACGCTGCGTATTCAGCCGGGATATGATCACAGTTACTACTTCATCGCCTCTTTTATAGAGGATCACCTGCGCTTCCATGCGCAGTATTTACTGAAGTGA", + "dna_sequence_length": 837, + "functions": [ + "S-formylglutathione hydrolase" + ], + "id": "CDS_2139", + "location": [ + [ + "NC_000913", + 2243910, + "+", + 837 + ] + ], + "md5": "f3d495c43f629f764150e2f36114d4af", + "parent_gene": "", + "protein_md5": "a96d9a8dfdfdc1b536f250efd6b696a1", + "protein_translation": "MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007126" + ], + [ + "gene_synonym", + "ECK2148" + ], + [ + "gene_synonym", + "EcoGene:EG10155" + ], + [ + "gene_synonym", + "GI:16130093" + ], + [ + "gene_synonym", + "GeneID:949042" + ], + [ + "gene_synonym", + "JW2142" + ], + [ + "gene_synonym", + "NP_416660.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17315" + ], + [ + "gene_synonym", + "b2155" + ], + [ + "gene_synonym", + "cir" + ], + [ + "gene_synonym", + "cirA" + ], + [ + "gene_synonym", + "feuA" + ] + ], + "dna_sequence": "ATGTTTAGGTTGAACCCTTTCGTACGGGTCGGGCTGTGTTTGTCCGCTATTTCTTGTGCATGGCCTGTGTTAGCGGTCGATGATGATGGCGAAACGATGGTTGTCACTGCATCTTCCGTGGAACAAAATCTTAAAGATGCACCTGCCAGTATCAGCGTCATTACCCAGGAAGACCTGCAGCGAAAACCGGTACAGAATCTGAAGGATGTCCTCAAAGAAGTGCCTGGCGTACAACTGACGAACGAAGGGGATAACCGTAAGGGCGTTAGTATTCGTGGTCTGGACAGCAGCTATACCCTGATTCTCGTCGACGGTAAACGCGTGAACTCCCGCAATGCCGTCTTCCGCCACAATGATTTCGATCTGAACTGGATCCCGGTCGATTCCATCGAACGTATTGAAGTGGTCCGTGGCCCGATGTCGTCGCTGTACGGTTCCGATGCGCTCGGCGGTGTAGTGAATATCATCACCAAAAAAATCGGTCAGAAATGGTCGGGTACCGTTACCGTCGATACCACCATTCAGGAACATCGCGATCGCGGTGACACCTATAACGGTCAGTTCTTTACCAGTGGACCATTAATTGATGGTGTGCTGGGAATGAAAGCTTACGGCAGCCTGGCAAAACGTGAAAAGGATGACCCGCAAAACTCAACGACCACCGATACCGGAGAAACGCCGCGTATTGAAGGATTCTCCAGCCGCGACGGCAATGTCGAATTTGCCTGGACACCGAATCAAAATCACGATTTTACTGCCGGATACGGTTTCGACCGTCAGGATCGTGATTCCGACTCGCTGGACAAAAACCGCCTGGAACGCCAGAACTACTCCGTCAGCCATAATGGGCGTTGGGATTACGGCACCAGCGAACTGAAATACTACGGTGAGAAAGTCGAGAACAAAAACCCTGGCAACAGCAGCCCGATAACTTCCGAAAGCAATACGGTCGACGGCAAATACACGTTGCCGCTGACGGCGATTAATCAGTTTCTCACGGTTGGCGGTGAATGGCGTCACGACAAACTTAGCGATGCGGTGAACCTGACCGGGGGAACCAGCTCCAAAACGTCTGCCAGCCAGTACGCGCTGTTTGTGGAAGATGAATGGCGGATCTTCGAGCCGCTGGCGCTGACGACCGGCGTGCGTATGGACGATCACGAAACCTACGGTGAACACTGGAGTCCGCGTGCCTACCTGGTTTATAACGCCACCGACACCGTAACGGTGAAAGGGGGCTGGGCGACGGCATTTAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACCAGCGAAAGTTGGGAGCTGGGGCTTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAAGATCGTATCAGCATCAGCCGTACGTCTGACGTCAACGCTGCACCGGGCTACCAAAACTTTGTTGGTTTTGAGACGGGCGCTAACGGACGGCGCATACCGGTATTTAGCTACTACAACGTTAACAAAGCTCGTATTCAGGGCGTGGAAACCGAACTGAAAATTCCGTTCAACGATGAATGGAAACTGTCGATCAACTACACCTACAACGATGGTCGTGATGTCAGCAACGGCGAAAACAAACCGCTATCCGATCTGCCGTTCCATACTGCTAACGGTACGCTGGACTGGAAACCGCTGGCGCTGGAAGACTGGTCATTCTATGTTTCTGGGCACTATACCGGGCAGAAACGCGCCGACAGCGCGACGGCTAAAACACCGGGCGGTTATACCATCTGGAATACCGGCGCGGCCTGGCAGGTGACTAAAGACGTCAAACTGCGCGCAGGCGTGCTGAACCTTGGCGACAAGGATCTCAGTCGTGACGACTACAGCTATAACGAAGACGGACGTCGTTACTTTATGGCAGTGGATTATCGCTTCTGA", + "dna_sequence_length": 1992, + "functions": [ + "colicin IA outer membrane receptor and translocator", + "ferric iron-catecholate transporter" + ], + "id": "CDS_2140", + "location": [ + [ + "NC_000913", + 2246769, + "-", + 1992 + ] + ], + "md5": "6eac0d6cce18a6079ab3baac179b24f3", + "parent_gene": "", + "protein_md5": "92a43109126430852293811a8156119c", + "protein_translation": "MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF", + "protein_translation_length": 663, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007131" + ], + [ + "gene_synonym", + "ECK2149" + ], + [ + "gene_synonym", + "EcoGene:EG11337" + ], + [ + "gene_synonym", + "GI:16130094" + ], + [ + "gene_synonym", + "GeneID:946667" + ], + [ + "gene_synonym", + "JW2143" + ], + [ + "gene_synonym", + "NP_416661.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25737" + ], + [ + "gene_synonym", + "b2156" + ], + [ + "gene_synonym", + "cadR" + ], + [ + "gene_synonym", + "lysP" + ] + ], + "dna_sequence": "ATGGTTTCCGAAACTAAAACCACAGAAGCGCCGGGCTTACGCCGTGAATTAAAGGCGCGTCACCTGACGATGATTGCCATTGGCGGTTCCATCGGTACAGGTCTTTTTGTTGCCTCTGGCGCAACGATTTCTCAGGCAGGTCCGGGCGGGGCATTGCTCTCGTATATGCTGATTGGCCTGATGGTTTACTTCCTGATGACCAGTCTCGGTGAACTGGCTGCATATATGCCGGTTTCCGGTTCGTTTGCCACTTACGGTCAGAACTATGTTGAAGAAGGCTTTGGCTTCGCGCTGGGCTGGAACTACTGGTACAACTGGGCGGTGACTATCGCCGTTGACCTGGTTGCAGCTCAGCTGGTCATGAGCTGGTGGTTCCCGGATACACCGGGCTGGATCTGGAGTGCGTTGTTCCTCGGCGTTATCTTCCTGCTGAACTACATCTCAGTTCGTGGCTTTGGTGAAGCGGAATACTGGTTCTCACTGATCAAAGTCACGACAGTTATTGTCTTTATCATCGTTGGCGTGCTGATGATTATCGGTATCTTCAAAGGCGCGCAGCCTGCGGGCTGGAGCAACTGGACAATCGGCGAAGCGCCGTTTGCTGGTGGTTTTGCGGCGATGATCGGCGTAGCTATGATTGTCGGCTTCTCTTTCCAGGGAACCGAGCTGATCGGTATTGCTGCAGGCGAGTCCGAAGATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGATCCTGATTATCAGCCTGATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAAGACATCAGCGTTAGTCCGTTCACCCTGGTGTTCCAGCACGCGGGTCTGCTCTCTGCGGCGGCGGTGATGAACGCAGTTATTCTGACGGCGGTGCTGTCAGCGGGTAACTCCGGTATGTATGCGTCTACTCGTATGCTGTACACCCTGGCGTGTGACGGTAAAGCGCCGCGCATTTTCGCTAAACTGTCGCGTGGTGGCGTGCCGCGTAATGCGCTGTATGCGACGACGGTGATTGCCGGTCTGTGCTTCCTGACCTCCATGTTTGGCAACCAGACGGTATACCTGTGGCTGCTGAACACCTCCGGGATGACGGGTTTTATCGCCTGGCTGGGGATTGCCATTAGCCACTATCGCTTCCGTCGCGGTTACGTATTGCAGGGACACGACATTAACGATCTGCCGTACCGTTCAGGTTTCTTCCCACTGGGGCCGATCTTCGCATTCATTCTGTGTCTGATTATCACTTTGGGCCAGAACTACGAAGCGTTCCTGAAAGATACTATTGACTGGGGCGGCGTAGCGGCAACGTATATTGGTATCCCGCTGTTCCTGATTATTTGGTTCGGCTACAAGCTGATTAAAGGAACTCACTTCGTACGCTACAGCGAAATGAAGTTCCCGCAGAACGATAAGAAATAA", + "dna_sequence_length": 1470, + "functions": [ + "lysine transporter" + ], + "id": "CDS_2141", + "location": [ + [ + "NC_000913", + 2248532, + "-", + 1470 + ] + ], + "md5": "8d70c1921625b396d79ba33fc3f82d06", + "parent_gene": "", + "protein_md5": "7de515daa8df4b4fba2378e7f496f93d", + "protein_translation": "MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK", + "protein_translation_length": 489, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007138" + ], + [ + "gene_synonym", + "ECK2150" + ], + [ + "gene_synonym", + "EcoGene:EG12105" + ], + [ + "gene_synonym", + "GI:16130095" + ], + [ + "gene_synonym", + "GeneID:946657" + ], + [ + "gene_synonym", + "JW2144" + ], + [ + "gene_synonym", + "NP_416662.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACR4" + ], + [ + "gene_synonym", + "b2157" + ], + [ + "gene_synonym", + "yeiE" + ] + ], + "dna_sequence": "ATGCACATCACCCTCCGGCAGTTGGAAGTTTTTGCAGAAGTATTGAAAAGTGGATCAACCACCCAGGCGTCGGTGATGCTGGCGTTGTCGCAATCAGCAGTGAGCGCAGCCTTGACCGACCTGGAAGGGCAGCTTGGCGTGCAACTGTTTGATCGCGTGGGGAAAAGACTGGTTGTTAATGAACACGGGCGGCTGCTCTATCCGCGTGCGTTGGCATTGCTTGAACAGGCGGTTGAAATCGAACAACTGTTTCGCGAAGACAACGGCGCGATTCGTATCTATGCCAGTAGTACCATCGGTAACTACATTCTGCCTGCAGTTATCGCCCGTTATCGCCATGATTATCCGCAGTTGCCGATTGAACTTAGCGTTGGGAATAGCCAGGACGTGATGCAAGCGGTGCTGGATTTCCGCGTTGATATTGGCTTTATTGAAGGACCGTGCCACAGCACTGAAATCATTTCTGAACCGTGGCTGGAAGACGAGCTGGTGGTTTTCGCCGCGCCGACTTCGCCGTTGGCCCGTGGTCCGGTCACCTTAGAACAGCTGGCCGCTGCGCCGTGGATCCTGCGTGAACGCGGTTCCGGCACGCGGGAGATTGTCGATTATCTGTTGCTGTCACATTTACCGAAGTTTGAGATGGCGATGGAATTAGGTAACTCCGAGGCAATCAAACATGCGGTGCGTCATGGGTTGGGAATTAGTTGCCTGTCGCGACGTGTGATTGAAGATCAATTGCAGGCAGGCACATTAAGTGAAGTTGCGGTCCCTCTGCCGCGCCTGATGCGTACGTTGTGGCGTATACATCATCGGCAAAAACACCTTTCCAACGCGCTACGGCGCTTTCTGGACTATTGCGATCCCGCAAATGTGCCGCGTTAA", + "dna_sequence_length": 882, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2142", + "location": [ + [ + "NC_000913", + 2249618, + "-", + 882 + ] + ], + "md5": "9505926dce2333ce9d46ddb3685bcb97", + "parent_gene": "", + "protein_md5": "cc3e6fb6928dbf30678f50efdfaf37a0", + "protein_translation": "MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007142" + ], + [ + "gene_synonym", + "ECK2151" + ], + [ + "gene_synonym", + "EcoGene:EG12027" + ], + [ + "gene_synonym", + "GI:16130096" + ], + [ + "gene_synonym", + "GeneID:946668" + ], + [ + "gene_synonym", + "JW2145" + ], + [ + "gene_synonym", + "NP_416663.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62723" + ], + [ + "gene_synonym", + "b2158" + ], + [ + "gene_synonym", + "yeiH" + ] + ], + "dna_sequence": "ATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGCCCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTATCCGCACATCTGGAAAAGCTGTGACGGTGGTGTGCTGTTTGCCAAGCAATATTTATTACGTCTGGGTATCATTCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCGGTATCAGTGGGATCATCATTGACGTGTTGACGCTGTCCAGTACCTTCCTGCTGGCTTGCTTCCTGGGGCAGAAAGTGTTTGGTCTGGATAAGCACACCAGCTGGTTGATCGGTGCCGGTAGCAGTATCTGTGGTGCTGCCGCGGTACTGGCGACTGAGCCGGTAGTGAAAGCGGAAGCCAGTAAAGTAACCGTGGCTGTTGCAACCGTTGTTATCTTCGGGACCGTCGCGATTTTCCTCTACCCGGCGATATATCCGCTGATGTCTCAATGGTTTAGTCCGGAAACTTTCGGTATCTACATTGGTTCTACTGTGCACGAAGTGGCGCAGGTGGTGGCGGCAGGTCATGCCATCAGCCCGGATGCGGAAAACGCAGCAGTTATTTCCAAAATGCTGCGCGTGATGATGCTGGCTCCGTTCCTCATCCTGCTGGCGGCGCGTGTTAAACAGCTGTCTGGGGCGAACAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCATCGTAGTTGCCATCTTTAACTCGTTCCACCTGTTACCGCAGAGCGTGGTGAACATGCTGGTAACGCTGGATACCTTCCTGCTGGCAATGGCGATGGCGGCGCTGGGTCTGACCACTCACGTCAGCGCGCTGAAAAAAGCTGGGGCGAAACCTCTGCTGATGGCACTGGTACTGTTTGCCTGGCTGATTGTTGGTGGTGGTGCGATTAACTATGTGATTCAAAGCGTCATCGCATAA", + "dna_sequence_length": 1050, + "functions": [ + "UPF0324 family inner membrane protein" + ], + "id": "CDS_2143", + "location": [ + [ + "NC_000913", + 2249717, + "+", + 1050 + ] + ], + "md5": "81d556c1f61cd76aad96077e36f7d2aa", + "parent_gene": "", + "protein_md5": "c004b46ac0d958685cc3dfd0e52110c7", + "protein_translation": "MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007146" + ], + [ + "gene_synonym", + "ECK2152" + ], + [ + "gene_synonym", + "EcoGene:EG10651" + ], + [ + "gene_synonym", + "GI:16130097" + ], + [ + "gene_synonym", + "GeneID:946669" + ], + [ + "gene_synonym", + "JW2146" + ], + [ + "gene_synonym", + "NP_416664.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6C1" + ], + [ + "gene_synonym", + "b2159" + ], + [ + "gene_synonym", + "nfo" + ] + ], + "dna_sequence": "ATGAAATACATTGGAGCGCACGTTAGTGCTGCTGGCGGTCTGGCAAATGCCGCAATTCGCGCCGCCGAAATCGACGCAACCGCGTTTGCCTTGTTCACCAAAAACCAACGTCAGTGGCGTGCCGCACCGCTCACGACGCAAACCATCGATGAATTCAAAGCCGCCTGTGAAAAATATCACTACACATCGGCGCAAATTCTTCCCCACGACAGTTATCTGATTAACCTCGGACATCCGGTCACTGAAGCTCTGGAAAAATCGCGCGATGCCTTTATAGATGAAATGCAGCGTTGCGAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAGGATTGCCTTGCGCGTATTGCCGAATCCATCAACATTGCGCTGGATAAAACTCAAGGTGTGACAGCGGTGATAGAAAACACCGCCGGTCAGGGCAGTAACTTAGGGTTTAAATTCGAACATCTCGCGGCGATTATCGACGGCGTGGAAGATAAATCCCGCGTCGGCGTCTGCATTGATACCTGCCATGCTTTCGCTGCCGGGTATGATTTGCGTACTCCAGCCGAATGCGAGAAAACATTCGCGGATTTTGCCCGTACTGTCGGCTTTAAGTATCTGCGCGGGATGCACCTTAACGATGCGAAAAGCACCTTTGGCAGCCGCGTTGACCGCCATCATAGCCTCGGTGAAGGCAATATCGGTCATGATGCGTTCCGCTGGATCATGCAGGACGACCGTTTCGACGGCATTCCGCTGATCCTCGAAACCATCAACCCGGATATCTGGGCAGAAGAGATCGCCTGGCTGAAAGCGCAACAAACTGAAAAAGCGGTAGCCTGA", + "dna_sequence_length": 858, + "functions": [ + "endonuclease IV with intrinsic 3'-5' exonuclease activity" + ], + "id": "CDS_2144", + "location": [ + [ + "NC_000913", + 2250840, + "+", + 858 + ] + ], + "md5": "5372f5b26464cca3817f19a4001e5c02", + "parent_gene": "", + "protein_md5": "a6ae3b93949f7b83e1f48a1c29a8077d", + "protein_translation": "MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007149" + ], + [ + "gene_synonym", + "ECK2153" + ], + [ + "gene_synonym", + "EcoGene:EG12028" + ], + [ + "gene_synonym", + "GI:16130098" + ], + [ + "gene_synonym", + "GeneID:946640" + ], + [ + "gene_synonym", + "JW2147" + ], + [ + "gene_synonym", + "NP_416665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33020" + ], + [ + "gene_synonym", + "b2160" + ], + [ + "gene_synonym", + "yeiI" + ] + ], + "dna_sequence": "ATGAATAACCGGGAAAAGGAGATCCTTGCAATTTTACGGCGTAACCCGCTGATTCAGCAGAACGAAATTGCGGACATGCTGCAAATCAGCCGTTCGCGCGTTGCGGCGCATATTATGGATTTAATGCGCAAAGGCCGGATTAAAGGCAAAGGTTACATTCTCACCGAGCAGGAATACTGCGTAGTGGTGGGGACAATCAATATGGATATTCGCGGGATGGCGGATATCCGTTACCCGCAATCGGCTTCTCATCCCGGTACAATTCATTGCTCAGCGGGCGGCGTGGGACGCAACATCGCCCACAATCTGGCGCTGTTAGGCCGTGACGTCCATTTGCTTTCAGTGATTGGCGATGACTTTTATGGCGAAATGCTCCTGGAAGAAACGCGCCGTGCCGGCGTGAATGTCTCCGGCTGCGTTCGTTTGCATGGTCAAAGCACATCGACGTATCTGGCAATTGCCAATCGAGACGATCAAACCGTGCTGGCGATTAACGATACCCATCTGCTGGAACAGTTGACACCGCAACTACTGAACGGGTCGCGCGATTTACTTCGTCATGCGGGCGTGGTACTGGCTGATTGCAACCTGACAGCCGAGGCGCTGGAATGGGTCTTTACCCTCGCTGATGAAATCCCGGTGTTTGTCGATACCGTTTCAGAATTCAAAGCGGGCAAAATCAAACACTGGCTGGCGCATATTCACACCCTGAAACCCACTTTACCGGAGCTGGAAATTTTATGGGGACAGGCGATCACCAGCGATGCTGACCGTAATACCGCAGTGAATGCATTGCATCAGCAAGGTGTTCAGCAACTGTTTGTTTATTTGCCCGATGAGTCAGTTTATTGCAGCGAAAAGGATGGAGAACAATTTTTGCTGACCGCGCCAGCGCATACGACAGTAGACAGTTTTGGTGCTGACGATGGTTTTATGGCGGGCCTGGTATATAGCTTTCTTGAAGGATACAGTTTCCGCGACAGCGCCCGTTTTGCGGTAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAA", + "dna_sequence_length": 1089, + "functions": [ + "putative kinase" + ], + "id": "CDS_2145", + "location": [ + [ + "NC_000913", + 2251700, + "+", + 1089 + ] + ], + "md5": "12f863884a79fb28a8b4b48f67471573", + "parent_gene": "", + "protein_md5": "73175ae3c97b07fa6aa7a76022803a31", + "protein_translation": "MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007152" + ], + [ + "gene_synonym", + "ECK2154" + ], + [ + "gene_synonym", + "EcoGene:EG12029" + ], + [ + "gene_synonym", + "GI:16130099" + ], + [ + "gene_synonym", + "GeneID:946655" + ], + [ + "gene_synonym", + "JW2148" + ], + [ + "gene_synonym", + "NP_416666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33021" + ], + [ + "gene_synonym", + "b2161" + ], + [ + "gene_synonym", + "nupX" + ], + [ + "gene_synonym", + "yeiJ" + ] + ], + "dna_sequence": "ATGGATGTCATGAGAAGTGTTCTGGGAATGGTGGTATTGCTGACGATTGCGTTTTTACTGTCAGTAAACAAGAAGAAGATCAGCCTGCGTACCGTTGGCGCGGCGTTAGTGTTACAGGTCGTGATTGGCGGCATTATGCTTTGGTTACCGCCAGGGCGTTGGGTCGCTGAAAAAGTCGCTTTTGGCGTGCATAAAGTGATGGCGTACAGCGACGCGGGTAGCGCATTTATCTTCGGTTCTCTGGTCGGACCGAAAATGGATACCTTATTTGATGGTGCAGGATTTATCTTTGGTTTCAGGGTGTTACCGGCAATTATCTTCGTCACCGCGCTGGTGAGTATTCTCTACTACATCGGTGTGATGGGGATTTTAATTCGAATTCTCGGCGGTATCTTCCAGAAAGCATTAAATATCAGCAAGATCGAGTCATTCGTCGCGGTCACCACCATTTTCCTCGGGCAAAACGAAATTCCGGCAATCGTCAAACCCTTTATCGATCGTCTGAATCGCAATGAATTATTTACAGCGATTTGTAGTGGCATGGCCTCGATTGCTGGTTCGACAATGATTGGTTACGCCGCACTGGGCGTGCCTGTGGAATATCTGCTGGCGGCATCATTAATGGCGATCCCTGGCGGGATCTTGTTTGCCCGCCTGTTAAGCCCGGCAACGGAATCTTCGCAGGTTTCCTTTAATAACCTCTCTTTCACCGAAACACCGCCAAAAAGCATTATTGAAGCCGCTGCGACAGGGGCAATGACCGGGCTGAAAATCGCCGCAGGTGTGGCAACAGTGGTGATGGCATTTGTTGCAATAATTGCGTTGATTAACGGTATTATCGGCGGCGTTGGTGGCTGGTTTGGTTTTGAACATGCCTCGCTGGAGTCCATTTTAGGTTACCTGCTGGCTCCACTGGCGTGGGTGATGGGTGTGGACTGGAGTGATGCGAATCTTGCCGGGAGTTTGATTGGACAGAAACTGGCAATAAATGAATTTGTCGCTTATCTCAATTTCTCACCCTATCTGCAAACGGCTGGCACTCTCGATGCTAAAACTGTGGCGATTATTTCCTTCGCGTTGTGCGGTTTCGCTAACTTTGGTTCTATCGGGGTGGTGGTGGGGGCGTTTTCTGCGGTTGCGCCACACCGTGCGCCGGAAATCGCCCAGCTTGGTTTACGGGCGCTGGCGGCGGCGACGCTTTCCAACTTGATGAGTGCGACCATTGCCGGGTTCTTTATTGGTTTAGCTTGA", + "dna_sequence_length": 1251, + "functions": [ + "nucleoside permease" + ], + "id": "CDS_2146", + "location": [ + [ + "NC_000913", + 2254145, + "-", + 1251 + ] + ], + "md5": "8ad95817bf81e0d13feb9b299455571f", + "parent_gene": "", + "protein_md5": "913f849a181031b124f381472e2e2bff", + "protein_translation": "MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007156" + ], + [ + "gene_synonym", + "ECK2155" + ], + [ + "gene_synonym", + "EcoGene:EG12030" + ], + [ + "gene_synonym", + "GI:16130100" + ], + [ + "gene_synonym", + "GeneID:946646" + ], + [ + "gene_synonym", + "JW2149" + ], + [ + "gene_synonym", + "NP_416667.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33022" + ], + [ + "gene_synonym", + "b2162" + ], + [ + "gene_synonym", + "rihB" + ], + [ + "gene_synonym", + "yeiK" + ] + ], + "dna_sequence": "ATGGAAAAGAGAAAAATTATTCTGGATTGTGATCCGGGTCATGATGATGCTATTGCTATAATGATGGCGGCGAAACATCCGGCAATAGATTTATTAGGCATCACTATTGTAGCGGGTAATCAGACGCTTGATAAAACATTAATTAATGGCCTGAATGTTTGCCAGAAACTGGAGATTAATGTTCCGGTTTATGCGGGGATGCCGCAGCCCATTATGCGTCAACAAATCGTTGCCGATAATATTCACGGTGAAACCGGACTGGATGGCCCGGTATTCGAGCCGCTGACCCGCCAGGCAGAAAGCACTCATGCGGTGAAATATATCATTGATACCCTGATGGCAAGCGATGGCGATATCACTCTGGTGCCGGTTGGTCCGCTTTCAAATATCGCGGTGGCAATGCGTATGCAACCCGCGATCCTGCCCAAAATCCGTGAAATTGTGCTAATGGGCGGCGCTTACGGTACAGGCAACTTCACGCCATCTGCCGAGTTCAACATCTTTGCCGACCCGGAAGCCGCACGCGTAGTGTTCACCTCCGGCGTTCCATTAGTGATGATGGGCCTCGATCTCACCAACCAGACCGTTTGCACCCCGGACGTGATTGCTCGGATGGAAAGGGCAGGCGGCCCCGCCGGAGAGCTGTTCAGCGACATCATGAACTTCACTCTCAAAACGCAGTTCGAAAACTACGGCCTTGCTGGCGGCCCGGTGCACGACGCCACCTGCATCGGTTATCTGATTAACCCTGATGGCATTAAAACCCAGGAGATGTACGTCGAAGTGGACGTCAACAGTGGCCCTTGCTATGGGCGTACCGTCTGCGACGAGCTGGGCGTTCTTGGCAAGCCCGCCAATACCAAAGTCGGCATCACTATTGATACAGACTGGTTCTGGGGATTAGTCGAAGAGTGCGTGCGCGGCTACATCAAAACCCATTAA", + "dna_sequence_length": 942, + "functions": [ + "ribonucleoside hydrolase 2" + ], + "id": "CDS_2147", + "location": [ + [ + "NC_000913", + 2255186, + "-", + 942 + ] + ], + "md5": "ee71d9896fd4ad37bddd62e1e1ca5af4", + "parent_gene": "", + "protein_md5": "805640c60a9d0766f8ecef4e3cfdb729", + "protein_translation": "MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007160" + ], + [ + "gene_synonym", + "ECK2156" + ], + [ + "gene_synonym", + "EcoGene:EG12031" + ], + [ + "gene_synonym", + "GI:49176193" + ], + [ + "gene_synonym", + "GeneID:946670" + ], + [ + "gene_synonym", + "JW2150" + ], + [ + "gene_synonym", + "NP_416668.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9E9" + ], + [ + "gene_synonym", + "b2163" + ], + [ + "gene_synonym", + "yeiL" + ] + ], + "dna_sequence": "ATGAGTGAATCCGCGTTTAAGGATTGCTTTTTAACGGATGTTTCAGCCGATACGCGGCTGTTTCATTTTTTAGCGCGTGACTACATTGTGCAGGAAGGGCAACAGCCGTCCTGGCTGTTTTACCTGACGCGAGGCCGCGCCAGGCTTTACGCCACGCTAGCTAATGGTCGCGTGTCGCTGATCGATTTCTTTGCCGCCCCCTGTTTTATTGGCGAGATTGAGTTAATCGATAAAGACCATGAACCGCGTGCGGTGCAGGCTATTGAAGAGTGTTGGTGCCTTGCGCTCCCTATGAAACATTACCGTCCGCTGTTATTAAACGACACGCTATTTTTACGAAAACTCTGCGTCACCTTAAGTCATAAAAATTATCGTAATATTGTTTCTTTAACTCAGAATCAATCATTTCCGTTAGTGAATCGCCTGGCAGCATTTATATTACTCTCGCAGGAAGGTGATCTTTATCACGAAAAGCATACGCAAGCGGCAGAGTATTTAGGCGTTTCTTATCGACATCTTTTATATGTTCTCGCGCAGTTCATTCACGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAA", + "dna_sequence_length": 660, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_2148", + "location": [ + [ + "NC_000913", + 2255355, + "+", + 660 + ] + ], + "md5": "c16bee25973c6da24539295d091560a4", + "parent_gene": "", + "protein_md5": "074864fc750f467a166295a758200fd3", + "protein_translation": "MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007163" + ], + [ + "gene_synonym", + "ECK2157" + ], + [ + "gene_synonym", + "EcoGene:EG12032" + ], + [ + "gene_synonym", + "GI:16130102" + ], + [ + "gene_synonym", + "GeneID:946671" + ], + [ + "gene_synonym", + "JW2151" + ], + [ + "gene_synonym", + "NP_416669.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33024" + ], + [ + "gene_synonym", + "b2164" + ], + [ + "gene_synonym", + "pscT" + ], + [ + "gene_synonym", + "psuT" + ], + [ + "gene_synonym", + "yeiM" + ] + ], + "dna_sequence": "ATGGATATAATGAGAAGTGTTGTGGGGATGGTGGTGTTACTGGCAATAGCATTTCTGTTGTCAGTGAATAAAAAGAGCATCAGTTTGCGCACGGTTGGAGCCGCACTGCTGCTGCAAATCGCTATTGGTGGCATCATGCTCTACTTCCCACCGGGAAAATGGGCAGTAGAACAGGCGGCATTAGGCGTTCATAAAGTGATGTCTTACAGTGATGCCGGTAGCGCCTTCATTTTTGGTTCGCTGGTTGGGCCGAAAATGGATGTCCTGTTTGACGGTGCGGGTTTTATCTTCGCCTTTCGCGTACTTCCGGCGATTATTTTCGTTACTGCGCTCATCAGTCTGCTGTACTACATTGGCGTGATGGGGCTGCTGATTCGCATCCTTGGCAGCATTTTCCAGAAAGCCCTCAACATCAGCAAAATCGAATCTTTTGTTGCGGTTACTACTATTTTCCTCGGGCAAAATGAGATCCCGGCGATCGTTAAACCGTTTATCGATCGCATGAATCGCAACGAGTTGTTTACCGCAATTTGTAGCGGGATGGCGTCCATTGCTGGTTCGATGATGATTGGTTATGCCGGAATGGGCGTACCAATTGACTACCTGTTAGCGGCATCGCTGATGGCGATCCCTGGCGGGATTTTGTTTGCACGTATTCTTAGCCCGGCAACCGAGCCTTCGCAGGTCACATTTGAAAATCTGTCGTTCAGCGAAACGCCGCCAAAAAGCTTTATCGAAGCGGCGGCGAGCGGTGCGATGACCGGGCTAAAAATCGCCGCTGGTGTGGCGACGGTGGTAATGGCGTTTGTCGCAATTATTGCGCTGATCAACGGCATTATCGGCGGAATTGGCGGCTGGTTTGGTTTCGCCAATGCCTCTCTGGAAAGTATTTTTGGCTATGTGCTGGCACCGCTGGCGTGGATCATGGGTGTGGACTGGAGTGATGCCAATCTTGCGGGTAGCCTGATTGGGCAGAAACTGGCGATTAACGAATTCGTCGCTTACCTGAGTTTCTCCCCATACCTGCAAACGGGCGGCACGCTGGAAGTGAAAACCATTGCGATTATCTCCTTTGCGCTTTGTGGTTTTGCTAACTTTGGTTCTATCGGTGTTGTCGTTGGCGCATTTTCGGCTATTTCGCCAAAACGCGCGCCGGAAATCGCCCAGCTTGGTTTACGGGCGCTGGCAGCAGCAACGCTTTCCAACCTGATGAGTGCGACTATTGCCGGGTTCTTTATTGGTCTGGCGTAA", + "dna_sequence_length": 1251, + "functions": [ + "putative nucleoside transporter" + ], + "id": "CDS_2149", + "location": [ + [ + "NC_000913", + 2257335, + "-", + 1251 + ] + ], + "md5": "dc55825c3488e6b4a75a41df14becf46", + "parent_gene": "", + "protein_md5": "41a1479eeb79d18fed416f7416096c32", + "protein_translation": "MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007165" + ], + [ + "gene_synonym", + "ECK2158" + ], + [ + "gene_synonym", + "EcoGene:EG12033" + ], + [ + "gene_synonym", + "GI:16130103" + ], + [ + "gene_synonym", + "GeneID:946699" + ], + [ + "gene_synonym", + "JW2152" + ], + [ + "gene_synonym", + "NP_416670.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33025" + ], + [ + "gene_synonym", + "b2165" + ], + [ + "gene_synonym", + "pscG" + ], + [ + "gene_synonym", + "psuG" + ], + [ + "gene_synonym", + "yeiN" + ] + ], + "dna_sequence": "ATGTCTGAATTAAAAATTTCCCCTGAATTATTACAAATTTCCCCGGAAGTGCAGGACGCTTTAAAAAACAAAAAACCGGTTGTGGCGCTGGAATCGACCATTATTTCTCACGGGATGCCGTTCCCACAAAATGCCCAGACCGCAATTGAAGTTGAAGAAACTATTCGTAAACAGGGCGCTGTACCTGCCACGATCGCCATTATTGGCGGCGTGATGAAAGTGGGGTTAAGCAAAGAAGAAATTGAATTACTGGGTCGTGAAGGGCATAACGTGACCAAAGTTAGTCGTCGCGATTTACCTTTTGTTGTTGCCGCCGGAAAAAATGGCGCAACCACTGTGGCTTCAACGATGATTATTGCGGCGCTTGCCGGAATTAAAGTATTTGCCACCGGGGGAATTGGTGGTGTGCATCGCGGGGCGGAACATACCTTCGATATTTCTGCCGATTTGCAAGAACTGGCAAATACTAATGTCACCGTTGTTTGTGCCGGGGCGAAATCTATTCTCGATTTAGGATTAACCACTGAGTATTTAGAAACCTTCGGTGTGCCGTTAATTGGCTATCAGACTAAAGCGCTGCCTGCGTTTTTCTGCCGCACCAGCCCGTTTGACGTCAGCATTCGTCTCGACAGCGCCAGCGAAATTGCCCGTGCAATGGTGGTGAAATGGCAAAGCGGTCTGAACGGTGGCCTCGTGGTAGCGAACCCGATCCCGGAACAGTTTGCTATGCCGGAACACACTATCAATGCGGCGATCGATCAGGCGGTAGCTGAAGCTGAAGCTCAGGGAGTCATTGGTAAAGAAAGTACGCCATTCCTGCTGGCGCGCGTTGCTGAACTGACCGGCGGTGACAGCCTGAAATCCAACATCCAGCTGGTGTTCAACAACGCCATTCTGGCGAGCGAAATTGCCAAAGAATATCAGCGTCTCGCGGGTTAA", + "dna_sequence_length": 939, + "functions": [ + "pseudouridine 5'-phosphate glycosidase" + ], + "id": "CDS_2150", + "location": [ + [ + "NC_000913", + 2258367, + "-", + 939 + ] + ], + "md5": "0b84f27552a44f900b724ef18c830e42", + "parent_gene": "", + "protein_md5": "99a92a7ea287a307adb08891af47c735", + "protein_translation": "MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007168" + ], + [ + "gene_synonym", + "ECK2159" + ], + [ + "gene_synonym", + "EcoGene:EG11646" + ], + [ + "gene_synonym", + "GI:16130104" + ], + [ + "gene_synonym", + "GeneID:946664" + ], + [ + "gene_synonym", + "JW2153" + ], + [ + "gene_synonym", + "NP_416671.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30235" + ], + [ + "gene_synonym", + "b2166" + ], + [ + "gene_synonym", + "pscK" + ], + [ + "gene_synonym", + "psuK" + ], + [ + "gene_synonym", + "yeiC" + ] + ], + "dna_sequence": "ATGCGCGAAAAGGATTATGTCGTAATTATAGGTTCGGCGAATATTGATGTCGCCGGATATTCACATGAATCATTAAATTATGCGGATTCAAATCCAGGTAAAATAAAATTTACGCCTGGTGGAGTAGGGCGCAATATTGCACAAAACCTGGCGTTGCTGGGTAACAAAGCCTGGCTACTGAGCGCCGTAGGCAGTGATTTTTATGGTCAATCGCTGCTAACGCAAACCAATCAATCTGGCGTTTATGTCGATAAATGCCTGATTGTGCCGGGAGAAAATACGTCGAGTTATTTATCATTACTCGATAATACCGGTGAAATGCTGGTTGCTATAAATGACATGAATATTAGCAACGCTATTACAGCTGAATATCTCGCACAGCACGGTGAATTTATTCAGAGGGCAAAGGTCATTGTCGCGGACTGTAATATCAGTGAAGAGGCACTGGCATGGATTCTGGATAATGCCGCCAACGTACCCGTATTTGTCGATCCGGTTTCGGCATGGAAATGTGTCAAAGTGCGCGACCGTCTAAATCAGATCCACACTCTCAAGCCAAACCGCCTTGAAGCGGAAACCCTGAGTGGGATTGCGCTGTCAGGGCGTGAAGATGTGGCAAAAGTTGCTGCCTGGTTCCATCAACATGGCCTGAACCGACTGGTATTGAGCATGGGCGGCGACGGCGTTTATTACAGCGATATCAGCGGTGAAAGTGGCTGGTCTGCGCCGATCAAAACCAATGTTATTAATGTTACCGGAGCGGGCGATGCCATGATGGCGGGACTTGCTTCGTGTTGGGTAGACGGAATGCCGTTTGCCGAATCTGTTCGTTTCGCACAGGGATGTTCGTCAATGGCGCTCTCCTGTGAATACACCAATAACCCCGATTTATCGATTGCCAACGTTATATCGTTAGTGGAGAACGCAGAATGTCTGAATTAA", + "dna_sequence_length": 942, + "functions": [ + "pseudouridine kinase" + ], + "id": "CDS_2151", + "location": [ + [ + "NC_000913", + 2259296, + "-", + 942 + ] + ], + "md5": "40ac8285bd8840ddc565241452197406", + "parent_gene": "", + "protein_md5": "7bd5eb95b9c853157f4cb3a020d91cb2", + "protein_translation": "MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007172" + ], + [ + "gene_synonym", + "ECK2160" + ], + [ + "gene_synonym", + "EcoGene:EG10336" + ], + [ + "gene_synonym", + "GI:16130105" + ], + [ + "gene_synonym", + "GeneID:946672" + ], + [ + "gene_synonym", + "JW2154" + ], + [ + "gene_synonym", + "NP_416672.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P20966" + ], + [ + "gene_synonym", + "b2167" + ], + [ + "gene_synonym", + "fruA" + ], + [ + "gene_synonym", + "ptsF" + ] + ], + "dna_sequence": "ATGAAAACGCTGCTGATTATTGACGCTAATCTCGGTCAGGCACGCGCCTATATGGCGAAGACCCTGCTGGGCGCGGCGGCGCGAAAAGCAAAACTGGAAATCATCGACAATCCGAACGACGCTGAAATGGCGATTGTTCTCGGTGATTCCATCCCGAACGACAGCGCGCTGAACGGTAAAAATGTCTGGCTGGGCGATATTTCCCGGGCAGTTGCGCACCCTGAGCTGTTCCTGAGTGAAGCCAAAGGCCATGCGAAACCTTACACTGCGCCGGTCGCTGCGACAGCACCAGTTGCCGCCAGCGGTCCGAAACGCGTAGTTGCGGTGACTGCTTGCCCGACTGGCGTAGCACACACCTTTATGGCGGCTGAAGCCATTGAAACCGAAGCGAAAAAACGTGGCTGGTGGGTGAAAGTTGAAACCCGTGGTTCTGTTGGCGCGGGTAATGCAATCACTCCCGAAGAAGTCGCAGCAGCGGATCTGGTGATTGTGGCGGCAGATATCGAAGTGGATCTGGCGAAATTTGCTGGTAAACCGATGTATCGTACCTCTACCGGTCTGGCGCTGAAGAAAACCGCGCAGGAACTGGATAAAGCGGTTGCTGAAGCAACGCCGTATGAACCGGCGGGCAAAGCTCAAACGGCGACCACTGAAAGTAAGAAAGAGAGTGCAGGCGCATACCGTCACTTGCTGACGGGCGTTTCTTACATGCTGCCGATGGTCGTTGCAGGTGGTCTGTGTATCGCGCTTTCTTTTGCTTTTGGTATCGAAGCGTTTAAAGAGCCGGGTACGTTGGCTGCGGCGCTGATGCAGATTGGTGGTGGTTCAGCCTTTGCGCTGATGGTGCCGGTACTGGCAGGTTATATTGCCTTTTCCATTGCCGATCGTCCGGGCCTCACTCCGGGTCTGATTGGCGGTATGCTGGCGGTCAGCACCGGTTCTGGCTTCATTGGTGGTATTATTGCGGGCTTCCTGGCTGGTTACATTGCGAAGTTAATCAGTACGCAATTGAAACTGCCACAGAGTATGGAGGCGCTGAAACCGATCCTGATCATTCCGCTAATTTCCAGTCTGGTGGTCGGTCTGGCGATGATCTACCTGATCGGTAAACCAGTTGCTGGCATTCTCGAAGGGCTGACTCACTGGCTGCAGACCATGGGGACTGCGAATGCGGTTCTGCTGGGGGCGATCCTCGGTGGCATGATGTGTACTGACATGGGCGGTCCGGTAAACAAAGCAGCGTACGCATTCGGTGTGGGTCTGCTGAGTACTCAAACCTATGGCCCGATGGCGGCGATTATGGCGGCAGGTATGGTGCCACCGCTGGCAATGGGTCTGGCAACAATGGTGGCGCGTCGCAAATTCGACAAAGCGCAGCAGGAAGGTGGCAAAGCCGCTCTGGTATTGGGACTGTGCTTCATTTCGGAAGGTGCAATTCCGTTTGCTGCTCGTGATCCGATGCGTGTGCTGCCGTGCTGTATCGTGGGTGGGGCGCTGACTGGCGCAATCTCAATGGCGATTGGTGCGAAACTGATGGCACCGCACGGTGGTCTGTTTGTTCTGCTGATCCCTGGCGCTATTACGCCGGTATTGGGTTACCTGGTAGCAATTATTGCCGGTACGCTGGTGGCGGGTTTGGCCTATGCCTTCCTGAAACGTCCGGAAGTGGACGCAGTAGCGAAAGCAGCGTAA", + "dna_sequence_length": 1692, + "functions": [ + "fused fructose-specific PTS enzymes: IIBcomponent/IIC components" + ], + "id": "CDS_2152", + "location": [ + [ + "NC_000913", + 2261410, + "-", + 1692 + ] + ], + "md5": "4839ed59838e9717ca6298c89a19339d", + "parent_gene": "", + "protein_md5": "3e4c32d28b0bea753a45d03181153eea", + "protein_translation": "MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA", + "protein_translation_length": 563, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007174" + ], + [ + "gene_synonym", + "ECK2161" + ], + [ + "gene_synonym", + "EcoGene:EG10337" + ], + [ + "gene_synonym", + "GI:16130106" + ], + [ + "gene_synonym", + "GeneID:946676" + ], + [ + "gene_synonym", + "JW2155" + ], + [ + "gene_synonym", + "NP_416673.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEW9" + ], + [ + "gene_synonym", + "b2168" + ], + [ + "gene_synonym", + "fpk" + ], + [ + "gene_synonym", + "fruK" + ] + ], + "dna_sequence": "ATGAGCAGACGTGTTGCTACTATCACCCTTAATCCGGCTTATGACCTTGTTGGTTTCTGCCCGGAAATTGAACGCGGCGAAGTGAACCTGGTGAAAACCACCGGTCTGCATGCGGCGGGTAAAGGCATCAACGTGGCCAAAGTATTAAAAGACCTGGGAATTGATGTCACCGTTGGCGGCTTCCTGGGTAAAGACAATCAGGATGGTTTTCAGCAACTGTTCAGCGAGCTGGGCATTGCCAACCGTTTCCAGGTTGTACAGGGGCGCACCCGAATTAACGTTAAGCTGACGGAAAAAGACGGCGAAGTGACCGACTTCAACTTCTCGGGTTTTGAAGTCACCCCCGCCGACTGGGAACGCTTTGTGACTGATTCTCTGAGCTGGCTCGGTCAGTTCGATATGGTCTGTGTCAGCGGAAGCTTACCGTCAGGCGTCAGCCCGGAAGCGTTCACCGACTGGATGACTCGCCTGCGTAGTCAGTGTCCTTGCATTATCTTTGATAGTAGCCGTGAAGCGTTAGTAGCAGGTTTGAAAGCGGCACCGTGGCTGGTGAAACCTAACCGCCGCGAGCTGGAAATCTGGGCAGGCCGTAAACTGCCTGAAATGAAAGATGTGATTGAAGCTGCACATGCGCTACGTGAACAAGGCATCGCGCATGTTGTTATTTCACTGGGTGCCGAAGGCGCGCTTTGGGTTAATGCCTCCGGCGAATGGATCGCCAAACCACCGTCAGTCGATGTCGTAAGCACCGTTGGCGCAGGGGATTCTATGGTTGGTGGCCTGATTTATGGCTTGCTGATGCGTGAATCCAGTGAACACACACTGCGTCTGGCGACAGCTGTTGCAGCCCTGGCGGTAAGTCAAAGCAATGTGGGTATTACCGATCGTCCGCAGTTGGCCGCAATGATGGCGCGCGTCGACTTACAACCTTTTAACTGA", + "dna_sequence_length": 939, + "functions": [ + "fructose-1-phosphate kinase" + ], + "id": "CDS_2153", + "location": [ + [ + "NC_000913", + 2262365, + "-", + 939 + ] + ], + "md5": "9e59fb93dbc345c0d526a120d4846341", + "parent_gene": "", + "protein_md5": "5648dbdd01a92664ee65d6337de4ceed", + "protein_translation": "MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007180" + ], + [ + "gene_synonym", + "ECK2162" + ], + [ + "gene_synonym", + "EcoGene:EG10005" + ], + [ + "gene_synonym", + "GI:16130107" + ], + [ + "gene_synonym", + "GeneID:946677" + ], + [ + "gene_synonym", + "JW2156" + ], + [ + "gene_synonym", + "NP_416674.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69811" + ], + [ + "gene_synonym", + "b2169" + ], + [ + "gene_synonym", + "fpr" + ], + [ + "gene_synonym", + "fruB" + ], + [ + "gene_synonym", + "fruF" + ] + ], + "dna_sequence": "ATGTTCCAGTTATCCGTACAGGACATCCATCCGGGCGAAAAGGCCGGAGACAAAGAAGAGGCGATTCGCCAGGTCGCTGCGGCGCTGGTGCAGGCCGGTAATGTAGCAGAAGGCTACGTCAATGGCATGCTGGCGCGCGAACAGCAAACCTCAACGTTCCTCGGCAATGGTATTGCTATTCCACACGGCACTACCGACACCCGCGATCAGGTGCTGAAAACCGGCGTTCAGGTATTTCAGTTCCCGGAAGGCGTCACCTGGGGTGACGGTCAGGTAGCGTACGTGGCAATCGGTATTGCTGCCAGCTCGGATGAACATCTGGGCCTGCTACGCCAGCTGACCCACGTACTGAGCGATGATTCCGTTGCTGAACAACTGAAGTCAGCAACAACAGCAGAAGAACTTCGCGCATTACTGATGGGCGAAAAGCAGAGTGAGCAGCTGAAGCTCGACAACGAAATGCTGACACTGGATATCGTCGCCAGCGATCTGCTGACTCTTCAGGCGCTGAACGCTGCGCGTCTGAAAGAGGCGGGGGCAGTTGACGCCACTTTCGTCACCAAAGCCATCAATGAACAACCGCTGAATCTCGGACAGGGTATCTGGCTGAGCGATAGCGCCGAAGGCAATCTGCGTAGCGCGATTGCGGTAAGCCGTGCGGCAAATGCTTTTGATGTGGACGGCGAAACGGCAGCCATGCTGGTGAGTGTGGCGATGAATGACGATCAGCCCATCGCGGTTCTTAAGCGTCTCGCTGATTTATTGCTCGACAATAAAGCTGACCGCTTGCTGAAAGCGGATGCGGCAACGTTGCTGGCGCTGCTGACCAGCGATGATGCGCCGACCGACGACGTGTTAAGCGCGGAGTTTGTGGTGCGCAATGAACACGGCCTGCATGCTCGTCCAGGTACCATGCTGGTCAATACCATTAAACAATTTAACAGTGATATTACCGTGACAAACCTTGATGGTACCGGCAAACCGGCAAACGGACGTAGTCTGATGAAAGTTGTGGCACTTGGCGTTAAGAAAGGTCATCGCCTACGCTTTACCGCCCAGGGTGCAGATGCTGAACAGGCGCTGAAAGCAATCGGCGACGCTATCGCTGCTGGTCTTGGGGAGGGCGCATAA", + "dna_sequence_length": 1131, + "functions": [ + "fused fructose-specific PTS enzymes: IIA component/HPr component" + ], + "id": "CDS_2154", + "location": [ + [ + "NC_000913", + 2263495, + "-", + 1131 + ] + ], + "md5": "cea33c337f8a2de16972d53716945a16", + "parent_gene": "", + "protein_md5": "76d373ba0068fd85094e2559dd07a94a", + "protein_translation": "MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLTSDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA", + "protein_translation_length": 376, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007184" + ], + [ + "gene_synonym", + "ECK2163" + ], + [ + "gene_synonym", + "EcoGene:EG12034" + ], + [ + "gene_synonym", + "GI:16130108" + ], + [ + "gene_synonym", + "GeneID:946673" + ], + [ + "gene_synonym", + "JW2157" + ], + [ + "gene_synonym", + "NP_416675.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33026" + ], + [ + "gene_synonym", + "b2170" + ], + [ + "gene_synonym", + "setB" + ], + [ + "gene_synonym", + "yeiO" + ] + ], + "dna_sequence": "ATGCATAACTCCCCCGCAGTCTCCAGCGCGAAATCGTTTGACCTGACCTCGACGGCGTTTTTAATCGTTGCCTTTCTCACCGGTATTGCGGGCGCTCTGCAAACCCCGACACTCAGTATTTTTCTTACCGATGAAGTACATGCCCGTCCGGCGATGGTGGGATTCTTCTTTACCGGCAGCGCTGTCATTGGGATTCTGGTAAGTCAGTTTCTCGCCGGGCGCTCTGATAAGCGCGGCGATCGCAAATCGCTGATTGTCTTTTGCTGCCTGTTAGGCGTGCTGGCCTGCACCCTTTTTGCCTGGAATCGCAACTACTTTGTTTTGCTATTCGTTGGCGTCTTTCTTAGCAGCTTTGGCTCGACCGCTAACCCGCAAATGTTTGCCCTTGCCCGTGAACATGCCGACAAAACCGGACGTGAGGCGGTGATGTTCAGCTCTTTTTTACGCGCTCAGGTTTCACTGGCATGGGTCATTGGCCCACCGCTGGCTTATGCCTTAGCGATGGGTTTCAGCTTTACGGTAATGTATCTGAGCGCAGCGGTAGCGTTTATTGTTTGCGGTGTGATGGTGTGGCTGTTTTTACCGTCGATGCGAAAAGAGCTTCCGCTGGCGACCGGCACGATCGAAGCGCCGCGCCGTAACCGTCGCGATACGCTGCTGCTGTTTGTCATTTGTACATTGATGTGGGGCTCGAACAGCCTGTACATCATCAACATGCCGCTATTTATTATCAACGAACTGCATCTTCCCGAGAAACTGGCCGGTGTGATGATGGGGACCGCCGCCGGGCTGGAAATCCCGACGATGTTGATTGCCGGATATTTCGCCAAACGTCTGGGTAAGCGTTTCTTAATGCGCGTTGCTGCCGTGGGTGGCGTCTGTTTTTACGCAGGAATGCTGATGGCGCATTCACCTGTCATTCTGTTGGGCTTGCAGCTGCTAAATGCTATTTTTATTGGCATTCTGGGCGGCATCGGGATGCTCTATTTTCAGGATCTGATGCCCGGTCAGGCGGGTTCAGCCACCACGCTCTATACCAACACTTCGCGCGTGGGCTGGATCATCGCAGGATCAGTGGCGGGCATCGTCGCCGAGATCTGGAATTATCACGCTGTGTTCTGGTTTGCGATGGTGATGATTATCGCCACTCTGTTTTGCTTACTGCGGATTAAAGATGTTTAA", + "dna_sequence_length": 1182, + "functions": [ + "lactose/glucose efflux system" + ], + "id": "CDS_2155", + "location": [ + [ + "NC_000913", + 2263863, + "+", + 1182 + ] + ], + "md5": "e6d5933e8c569237f732e05f42703e2f", + "parent_gene": "", + "protein_md5": "a1ab8b2028016f8c6fd272e25bca9ba4", + "protein_translation": "MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTIEAPRRNRRDTLLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGMLMAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRIKDV", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285016" + ], + [ + "gene_synonym", + "ECK2164" + ], + [ + "gene_synonym", + "EcoGene:EG14375" + ], + [ + "gene_synonym", + "GI:94541118" + ], + [ + "gene_synonym", + "GeneID:4056031" + ], + [ + "gene_synonym", + "JW5361" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFT8" + ], + [ + "gene_synonym", + "YP_588461.1" + ], + [ + "gene_synonym", + "b4502" + ], + [ + "gene_synonym", + "yeiW" + ] + ], + "dna_sequence": "ATGGAATGCCGTCCGGGTTGCGGGGCGTGTTGCACTGCCCCTTCAATTTCCAGCCCTATTCCCGGTATGCCAGATGGCAAGCCCGCCAATACGCCCTGCATTCAGCTTGATGAACAGCAACGCTGTAAAATTTTCACCTCGCCACTGCGACCGAAAGTCTGTGCAGGCTTACAAGCCAGCGCTGAAATGTGCGGTAACTCGCGTCAGCAGGCCATGACCTGGCTTATCGATCTGGAAATGCTGACCGCGCCTTAA", + "dna_sequence_length": 255, + "functions": [ + "UPF0153 cysteine cluster protein" + ], + "id": "CDS_2156", + "location": [ + [ + "NC_000913", + 2265295, + "-", + 255 + ] + ], + "md5": "569f250c61811039621dea8553b4cd67", + "parent_gene": "", + "protein_md5": "dba544ddbc138316162a3bb53f91d15e", + "protein_translation": "MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007187" + ], + [ + "gene_synonym", + "ECK2165" + ], + [ + "gene_synonym", + "EcoGene:EG12035" + ], + [ + "gene_synonym", + "GI:90111399" + ], + [ + "gene_synonym", + "GeneID:946674" + ], + [ + "gene_synonym", + "JW5362" + ], + [ + "gene_synonym", + "NP_416676.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6N8" + ], + [ + "gene_synonym", + "b2171" + ], + [ + "gene_synonym", + "yeiP" + ] + ], + "dna_sequence": "ATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGACGGTCAACTGCTGGCGCTTGAGCTGCCGCAGACCGTTGATCTGGAAATCGTTGAAACCGCACCAGGCATCAAAGGGGCATCTGCCAGCGCCCGTAACAAACCGGCGACATTGAGCACTGGTCTGGTGATTCAGGTACCAGAATACTTAAGCCCGGGCGAAAAAATTCGTATCCATATCGAAGAACGCCGTTATATGGGGCGTGCTGACTAA", + "dna_sequence_length": 573, + "functions": [ + "elongation factor P-like protein" + ], + "id": "CDS_2157", + "location": [ + [ + "NC_000913", + 2265450, + "+", + 573 + ] + ], + "md5": "033906a2d31d7237779ff342184379fe", + "parent_gene": "", + "protein_md5": "d0f6208c7ec49867d6a18499e56be373", + "protein_translation": "MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHIEERRYMGRAD", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007191" + ], + [ + "gene_synonym", + "ECK2166" + ], + [ + "gene_synonym", + "EcoGene:EG12036" + ], + [ + "gene_synonym", + "GI:16130110" + ], + [ + "gene_synonym", + "GeneID:946688" + ], + [ + "gene_synonym", + "JW2160" + ], + [ + "gene_synonym", + "NP_416677.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33029" + ], + [ + "gene_synonym", + "b2172" + ], + [ + "gene_synonym", + "yeiQ" + ] + ], + "dna_sequence": "ATGAATACAATCGCCTCCGTTACGCTCCCGCATCATGTACACGCTCCACGCTATGATCGCCAGCAGTTGCAATCACGTATCGTTCATTTTGGCTTTGGAGCCTTTCACCGCGCTCATCAGGCGTTACTGACCGATCGTGTGCTGAATGCCCAGGGCGGCGACTGGGGGATCTGTGAAATCAGCTTGTTCAGCGGTGATCAACTGATGAGCCAGCTCCGCGCACAGAACCATTTATATACCGTGCTGGAGAAAGGTGCGGACGGCAATCAGGTGATAATTGTCGGTGCCGTTCACGAATGCCTTAATGCAAAACTGGATTCCTTAGCGGCAATTATTGAGAAATTTTGCGAGCCACAGGTGGCAATTGTTTCCCTGACGATTACCGAAAAAGGCTATTGTATTGACCCGGCCACCGGTGCACTCGACACCAGTAATCCGCGGATTATTCACGATCTACAAACCCCTGAAGAACCTCACTCCGCACCGGGTATTCTCGTCGAAGCACTGAAACGCCGCCGTGAGCGCGGCCTTACACCGTTTACCGTGCTCTCCTGCGACAATATTCCCGACAATGGTCATGTGGTGAAAAACGCGGTGCTGGGAATGGCAGAAAAACGTTCGCCAGAACTCGCCGGGTGGATAAAAGAGCACGTCAGTTTTCCGGGAACCATGGTCGACCGCATTGTTCCGGCTGCAACCGACGAATCACTGGTGGAAATCAGCCAGCATCTGGGGGTGAATGATCCCTGCGCGATTAGCTGCGAACCGTTTATCCAGTGGGTGGTGGAAGATAACTTCGTCGCTGGGCGTCCTGCCTGGGAAGTCGCAGGTGTACAAATGGTGAATGATGTCCTGCCATGGGAAGAGATGAAACTGCGGATGCTTAATGGCAGCCACTCTTTTCTCGCTTATCTGGGTTACCTCTCAGGATTCGCCCATATCAGTGATTGCATGCAGGATCGCGCATTTCGCCATGCCGCCAGAACATTAATGCTGGATGAGCAAGCGCCGACACTGCAAATTAAAGATGTCGATTTAACACAATATGCGGATAAGTTAATTGCACGTTTTGCTAATCCGGCGCTGAAACATAAGACCTGGCAAATCGCGATGGATGGCAGCCAGAAATTACCGCAACGCATGCTGGCAGGTATTCGCATACATCAGGGGCGCGAAACGGACTGGTCGTTGCTGGCATTAGGCGTTGCAGGCTGGATGCGTTACGTCAGCGGCGTTGATGATGCCGGAAATGCCATTGATGTTCGCGATCCGCTTAGCGATAAAATTCGCGAACTTGTTGCGGGCAGCAGCAGTGAACAACGCGTAACCGCCCTGCTTTCCCTGCGTGAAGTTTTCGGTGATGATCTGCCAGATAACCCGCATTTTGTGCAGGCCATCGAACAAGCCTGGCAACAAATCGTACAATTCGGCGCACATCAGGCGCTATTAAACACCCTCAAAATTTAA", + "dna_sequence_length": 1467, + "functions": [ + "putative NAD-dependent D-mannonate oxidoreductase" + ], + "id": "CDS_2158", + "location": [ + [ + "NC_000913", + 2266245, + "+", + 1467 + ] + ], + "md5": "00586526be86f0c10c38f922de53884c", + "parent_gene": "", + "protein_md5": "0464de5937917f8125037a4cde875953", + "protein_translation": "MNTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLTDRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLNAKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHSAPGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGTMVDRIVPAATDESLVEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVAGVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDEQAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHQGRETDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLREVFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI", + "protein_translation_length": 488, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007194" + ], + [ + "gene_synonym", + "ECK2167" + ], + [ + "gene_synonym", + "EcoGene:EG12104" + ], + [ + "gene_synonym", + "GI:16130111" + ], + [ + "gene_synonym", + "GeneID:946701" + ], + [ + "gene_synonym", + "JW2161" + ], + [ + "gene_synonym", + "NP_416678.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33030" + ], + [ + "gene_synonym", + "b2173" + ], + [ + "gene_synonym", + "yeiR" + ] + ], + "dna_sequence": "GTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAATTGATGGTGCTTTGCTCGCCGATAGCGGCGCATTGCTGAAAGAGATCCCCGGCGGCTGCATGTGCTGCGTTAATGGTTTACCCATGCAGGTAGGGTTGAATACCTTACTGCGTCAGGGAAAACCAGACCGCTTGTTGATAGAGCCGACCGGGCTGGGCCATCCGAAACAGATCCTCGATCTGTTAACCGCACCAGTCTATGAACCGTGGATAGATCTGCGCGCCACCTTGTGCATTCTCGATCCGCGCTTGCTGCTGGACGAAAAAAGCGCCAGCAATGAAAACTTCCGTGACCAGCTGGCTGCCGCAGACATCATTGTCGCCAATAAATCCGACCGTACGACGCCCGAAAGTGAGCAAGCGCTACAGCGTTGGTGGCAGCAAAATGGTGGCGATCGACAATTAATTCACAGTGAGCATGGGAAAGTTGACGGTCATCTTCTGGATTTGCCGCGTCGCAATTTAGCCGAGTTGCCCGCCAGCGCCGCGCATTCTCATCAGCATGTCGTGAAAAAAGGGTTAGCAGCGTTAAGCCTGCCAGAGCATCAACGCTGGCGTCGCAGTCTGAACAGCGGGCAAGGATATCAGGCCTGCGGCTGGATATTCGACGCTGATACGGTATTCGACACCATTGGCATTCTGGAATGGGCGCGACTTGCACCGGTGGAACGCGTCAAAGGCGTGCTGCGTATTCCCGAAGGGCTGGTGCGAATCAACCGTCAGGGCGATGACCTGCACATTGAAACGCAAAACGTTGCGCCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGTTTAGCGACTACCGCGTAA", + "dna_sequence_length": 987, + "functions": [ + "Zn-stimulated GTPase involved in zinc homeostasis", + "mutants are cadmium and EDTA sensitive", + "Zn(2+) binding protein" + ], + "id": "CDS_2159", + "location": [ + [ + "NC_000913", + 2267829, + "+", + 987 + ] + ], + "md5": "2d53e1ecbdc33a7845afbd0d99c30bd6", + "parent_gene": "", + "protein_md5": "064d885e0acb6092a6432757cd898ed3", + "protein_translation": "MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRTTPESEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007196" + ], + [ + "gene_synonym", + "ECK2168" + ], + [ + "gene_synonym", + "EcoGene:EG14075" + ], + [ + "gene_synonym", + "GI:90111400" + ], + [ + "gene_synonym", + "GeneID:946693" + ], + [ + "gene_synonym", + "JW2162" + ], + [ + "gene_synonym", + "NP_416679.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76445" + ], + [ + "gene_synonym", + "b2174" + ], + [ + "gene_synonym", + "lpxT" + ], + [ + "gene_synonym", + "yeiU" + ] + ], + "dna_sequence": "ATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGGCCTCGCGCTGTTTCTTTCCTGGTATATCCCCGTTAATCATGGATTCTGGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGCAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACGGGCCAGCCCAACATTGACTTTTACCGATATTAACCGCGTCAGCGAACTGCTCTCTGTTCCCACGAAAGATGCCTCACGAGATAGCTTTCCCGGCGATCACGGCATGATGCTGCTTATTTTTTCGGCATTCATGTGGCGTTATTTCGGCAAAGTTGCAGGCCTTATCGCCCTTATTATTTTTGTGGTTTTTGCATTTCCCAGAGTAATGATTGGCGCACACTGGTTTACTGACATCATTGTCGGTTCGATGACCGTGATATTGATCGGTTTGCCCTGGGTGTTGCTGACGCCATTAAGTGATCGATTAATCACCTTTTTTGACAAATCACTACCAGGAAAAAACAAACATTTCCAAAACAAATAA", + "dna_sequence_length": 714, + "functions": [ + "lipid A 1-diphosphate synthase", + "undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase" + ], + "id": "CDS_2160", + "location": [ + [ + "NC_000913", + 2268854, + "+", + 714 + ] + ], + "md5": "dda5ead5fdb3a25940bfbe7d36742f32", + "parent_gene": "", + "protein_md5": "26fe1857db9e287a61c88f1fb8b185cb", + "protein_translation": "MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007200" + ], + [ + "gene_synonym", + "ECK2169" + ], + [ + "gene_synonym", + "EcoGene:EG14076" + ], + [ + "gene_synonym", + "GI:16130113" + ], + [ + "gene_synonym", + "GeneID:946686" + ], + [ + "gene_synonym", + "JW2163" + ], + [ + "gene_synonym", + "NP_416680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFV4" + ], + [ + "gene_synonym", + "b2175" + ], + [ + "gene_synonym", + "mepS" + ], + [ + "gene_synonym", + "spr" + ], + [ + "gene_synonym", + "yeiV" + ] + ], + "dna_sequence": "ATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCACTAAAAAAGGTATCGATTGTTCTGGTTTCGTACAGCGTACATTCCGTGAGCAATTTGGCTTAGAACTTCCGCGTTCGACTTACGAACAGCAGGAAATGGGTAAATCTGTTTCCCGCAGTAATTTGCGTACGGGTGATTTAGTTCTGTTCCGTGCCGGTTCAACGGGACGCCATGTCGGTATTTATATCGGCAACAATCAGTTTGTCCATGCTTCCACCAGCAGTGGTGTTATTATTTCCAGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAA", + "dna_sequence_length": 567, + "functions": [ + "murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase" + ], + "id": "CDS_2161", + "location": [ + [ + "NC_000913", + 2269979, + "+", + 567 + ] + ], + "md5": "ac94e8b636381c02b4942e0ca09b6459", + "parent_gene": "", + "protein_md5": "f49f9ea811d89e701c0cc9d9a464363a", + "protein_translation": "MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRVLSRS", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007203" + ], + [ + "gene_synonym", + "ECK2170" + ], + [ + "gene_synonym", + "EcoGene:EG14077" + ], + [ + "gene_synonym", + "GI:16130114" + ], + [ + "gene_synonym", + "GeneID:946695" + ], + [ + "gene_synonym", + "JW2164" + ], + [ + "gene_synonym", + "NP_416681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76446" + ], + [ + "gene_synonym", + "b2176" + ], + [ + "gene_synonym", + "rtn" + ] + ], + "dna_sequence": "ATGTTCATACGCGCTCCCAATTTTGGACGTAAGCTCCTGCTTACCTGCATTGTTGCAGGCGTAATGATTGCGATACTGGTGAGTTGCCTTCAGTTTTTAGTGGCCTGGCATAAGCACGAAGTCAAATACGACACACTGATTACCGACGTACAAAAGTATCTCGATACCTATTTTGCCGACCTGAAATCCACTACTGACCGGCTCCAGCCGCTGACCTTAGATACCTGCCAGCAAGCTAACCCCGAACTGACCGCCCGCGCAGCGTTTAGCATGAATGTCCGAACGTTTGTGCTGGTGAAAGATAAAAAAACATTCTGTTCATCTGCGACCGGTGAGATGGACATTCCACTCAATGAATTGATTCCGGCGCTCGACATTAATAAAAACGTCGATATGGCGATCTTACCCGGCACGCCGATGGTGCCGAACAAACCCGCAATCGTCATCTGGTATCGCAACCCTTTGCTGAAAAATAGCGGCGTCTTTGCCGCTCTGAATCTCAACCTGACGCCTTCACTCTTTTATAGTTCACGGCAGGAAGATTACGATGGCGTCGCCCTCATTATTGGCAATACTGCGCTATCTACCTTTTCTTCACGTTTGATGAACGTTAACGAATTAACCGACATGCCAGTCCGTGAAACTAAAATTGCGGGCATTCCTCTGACCGTTCGGCTTTATGCAGATGACTGGACATGGAACGATGTGTGGTACGCATTTTTACTGGGCGGCATGAGTGGAACTGTCGTTGGCCTGCTCTGCTATTACCTGATGAGCGTACGTATGCGCCCCGGCAGAGAAATCATGACCGCCATCAAGCGCGAACAATTTTACGTGGCGTATCAACCGGTGGTGGATACACAAGCTTTGCGAGTAACGGGCCTGGAAGTACTGCTACGCTGGCGGCATCCTGTCGCGGGAGAAATTCCCCCGGATGCCTTCATTAACTTTGCCGAATCGCAAAAGATGATTGTGCCGCTGACTCAGCACCTGTTTGAGTTAATTGCCCGCGATGCCGCAGAATTAGAAAAAGTGCTGCCGGTAGGCGTCAAATTTGGTATTAACATTGCGCCGGACCATCTGCACAGCGAAAGCTTTAAAGCAGATATCCAGAAACTGCTCACTTCCCTGCCCGCACACCATTTCCAGATTGTGCTGGAAATTACCGAGCGCGATATGTTGAAAGAGCAAGAAGCCACACAACTCTTCGCCTGGCTGCACTCGGTCGGCGTAGAAATTGCTATTGATGACTTCGGCACCGGGCACAGCGCGCTTATCTATCTTGAGCGTTTTACGCTCGATTATCTGAAAATTGACCGTGGATTTATCAACGCCATCGGTACGGAAACGATCACTTCCCCCGTACTTGACGCGGTGCTGACGCTGGCGAAACGCCTCAATATGCTGACGGTTGCTGAAGGGGTCGAAACGCCGGAACAGGCGCGATGGCTAAGCGAACGCGGCGTTAATTTCATGCAAGGCTACTGGATTAGCCGCCCGTTACCGCTGGACGATTTTGTTCGCTGGCTAAAGAAACCGTATACGCCGCAGTGGTAA", + "dna_sequence_length": 1557, + "functions": [ + "resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_2162", + "location": [ + [ + "NC_000913", + 2270726, + "+", + 1557 + ] + ], + "md5": "302e3b9adc3b67463602be17f5046a02", + "parent_gene": "", + "protein_md5": "0fb8af4a1257bc7907737a8b84a58318", + "protein_translation": "MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW", + "protein_translation_length": 518, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007206" + ], + [ + "gene_synonym", + "ECK2171" + ], + [ + "gene_synonym", + "EcoGene:EG12037" + ], + [ + "gene_synonym", + "GI:90111401" + ], + [ + "gene_synonym", + "GeneID:946675" + ], + [ + "gene_synonym", + "JW2165" + ], + [ + "gene_synonym", + "NP_416682.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33913" + ], + [ + "gene_synonym", + "b2177" + ], + [ + "gene_synonym", + "yejA" + ] + ], + "dna_sequence": "ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTTGGTGTGCAGGCGCAGGCTATCAAGGAAAGCTATGCCTTTGCCGTGCTGGGCGAACCCCGGTACGCGTTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTGGGCAGATAACGTTGTCAGCCCTCGGCACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAACCCGGGCGCACGCACCGAGCAGCTGTACGACACGCTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGCGCACGCTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCGCGCGCCCGTTTTCATGATGGTTCGCCCATTACTGCCCGCGATGTAGAGTTTACTTTTCAAAAATTTATGACCGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTCAAAGCCATTGCACCGTTAACCGTGCGCATTGAGTTAGCTAAACCCGGCAAAGAAGATATGCTGAGTCTGTTTTCGCTGCCGGTATTTCCAGAAAAGTACTGGAAGGATCACAAACTTAGCGACCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACCGCGTTACGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGTGTGAAAGATTACTGGGCAGCAAACTTACCGGTAAACCGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGGTGCCTTTGATTTGCGTATGGAAAACGACGCCAAAAACTGGGCCACGCGTTATACCGGTAAAAATTTCGATAAAAAATACATCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGTTGGCTGGCGTTTAATATCCAACGTCCGGTATTCAGCGATCGCCGGGTCCGGGAAGCTATCACTCTCGCCTTTGACTTTGAATGGATGAACAAGGCGTTGTTTTACAATGCCTGGAGTCGCACGAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGAAAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGTGACAACCTGTTAAAAGCCGACAAACTTCTCAACGAAGCGGGCTGGGTGCTGAAGGGTCAGCAACGCGTTAATGCCACAACGGGTCAGCCACTCAGCTTTGAATTATTGCTTCCCGCAAGCAGCAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGCAACGGCTGGGTATCAACATGGACATTCGCAAGGTGGATAACTCGCAAATCACTAACCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAGAAAAATTACTGCCGTTGGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTACATGGCGGAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCAGCCGGCCGTGCGCCCCATCTATAGCCTCGGTATCGATACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAG", + "dna_sequence_length": 1815, + "functions": [ + "microcin C ABC transporter periplasmic binding protein" + ], + "id": "CDS_2163", + "location": [ + [ + "NC_000913", + 2272364, + "+", + 1815 + ] + ], + "md5": "30259b9434963f5dca4e1e513b874f6a", + "parent_gene": "", + "protein_md5": "93f74aac8e5e975c78eca45e4860eacd", + "protein_translation": "MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE", + "protein_translation_length": 604, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007208" + ], + [ + "gene_synonym", + "ECK2172" + ], + [ + "gene_synonym", + "EcoGene:EG12038" + ], + [ + "gene_synonym", + "GI:16130116" + ], + [ + "gene_synonym", + "GeneID:946679" + ], + [ + "gene_synonym", + "JW2166" + ], + [ + "gene_synonym", + "NP_416683.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU0" + ], + [ + "gene_synonym", + "b2178" + ], + [ + "gene_synonym", + "yejB" + ] + ], + "dna_sequence": "ATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCCATCACCCTCGGATTGTGGAGCACGCTGATTATCTATCTGGTGTCGATTCCGTTAGGCATTCGCAAAGCTGTTTATAATGGGAGCCGCTTTGACGTCTGGAGTAGCGCATTTATCATCATCGGCTACGCCATTCCGGCCTTTTTGTTTGCCATCCTGCTGATTGTCTTCTTCGCGGGCGGCAGCTATTTCGACCTGTTCCCTCTACGCGGCCTGGTTTCCGCTAACTTTGATTCGCTGCCGTGGTATCAGAAAATCACCGATTATCTGTGGCATATCACGCTGCCGGTGCTGGCGACAGTGATTGGTGGCTTTGCGGCGCTGACCATGCTGACAAAAAACTCATTCCTTGATGAAGTGCGCAAGCAATACGTGGTGACCGCGCGTGCGAAAGGGGTAAGTGAAAAAAATATTCTCTGGAAACATGTGTTCCGCAACGCCATGCTGCTGGTGATTGCCGGTTTTCCGGCGACGTTTATCAGCATGTTTTTTACCGGCTCGCTGCTGATTGAGGTGATGTTTTCACTCAATGGTCTGGGCTTACTGGGCTACGAAGCGACCGTCTCGCGCGATTATCCTGTAATGTTTGGTACCTTGTATATTTTCACCCTGATTGGCCTGCTGCTGAATATTGTCAGTGATATCAGCTATACGCTGGTTGATCCGCGTATTGATTTTGAGGGACGTTAA", + "dna_sequence_length": 1095, + "functions": [ + "microcin C ABC transporter permease" + ], + "id": "CDS_2164", + "location": [ + [ + "NC_000913", + 2274179, + "+", + 1095 + ] + ], + "md5": "add18e6c2c1e2cfe382c58d43ef57ceb", + "parent_gene": "", + "protein_md5": "ca378b7f66bed154a8d0d51b494fd345", + "protein_translation": "MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR", + "protein_translation_length": 364, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007210" + ], + [ + "gene_synonym", + "ECK2173" + ], + [ + "gene_synonym", + "EcoGene:EG12040" + ], + [ + "gene_synonym", + "GI:16130117" + ], + [ + "gene_synonym", + "GeneID:946683" + ], + [ + "gene_synonym", + "JW2167" + ], + [ + "gene_synonym", + "NP_416684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33915" + ], + [ + "gene_synonym", + "b2179" + ], + [ + "gene_synonym", + "yejE" + ] + ], + "dna_sequence": "ATGTCGCGACTCAGCCCCGTCAATCAGGCCCGTTGGGCGCGTTTTCGTCATAACCGTCGCGGCTACTGGTCGTTATGGATTTTCCTCGTCTTGTTTGGTTTGAGTTTGTGTTCTGAACTTATCGCCAACGATAAACCGTTGCTGGTGCGTTATGACGGCAGTTGGTATTTCCCGTTATTGAAAAACTACAGCGAAAGCGATTTTGGCGGCCCGCTGGCAAGTCAGGCTGATTATCAGGACCCGTGGCTGAAACAACGGCTGGAAAATAACGGCTGGGTACTGTGGGCACCGATTCGCTTTGGTGCTACCAGTATCAACTTTGCTACCAATAAGCCCTTCCCTTCTCCACCCTCCCGGCAAAACTGGCTGGGAACGGATGCCAACGGCGGCGATGTGCTGGCACGCATTCTCTATGGCACGCGGATCTCGGTTCTGTTTGGCCTGATGCTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTATCATCCTGCGTCATATGTTGCCTAATGCCATGGTCGCGACCCTCACCTTTTTACCGTTTATTTTATGTAGTTCGATAACCACCCTGACCTCGCTCGATTTCCTCGGCTTCGGTCTACCGCTCGGTTCACCGTCACTCGGTGAACTGCTGTTACAAGGGAAAAATAACCTTCAGGCCCCGTGGCTTGGGATCACCGCCTTCTTGTCGGTGGCGATATTATTGTCTTTGCTGATCTTTATTGGTGAAGCCGTCCGCGACGCATTTGATCCTAATAAGGCGGTGTAG", + "dna_sequence_length": 1026, + "functions": [ + "microcin C ABC transporter permease" + ], + "id": "CDS_2165", + "location": [ + [ + "NC_000913", + 2275273, + "+", + 1026 + ] + ], + "md5": "3f9c46ff3068c2224d2b8d3088ae15d0", + "parent_gene": "", + "protein_md5": "297645d47d27689c4696861880d15b1b", + "protein_translation": "MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007212" + ], + [ + "gene_synonym", + "ECK2174" + ], + [ + "gene_synonym", + "EcoGene:EG12041" + ], + [ + "gene_synonym", + "GI:16130118" + ], + [ + "gene_synonym", + "GeneID:946689" + ], + [ + "gene_synonym", + "JW2168" + ], + [ + "gene_synonym", + "NP_416685.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33916" + ], + [ + "gene_synonym", + "b2180" + ], + [ + "gene_synonym", + "yejF" + ] + ], + "dna_sequence": "ATGACGCAAACTCTGTTAGCGATTGAAAATTTGTCGGTGGGTTTTCGCCATCAGCAAACCGTACGTACAGTAGTCAATGATGTTTCACTACAGATTGAGGCTGGCGAAACGCTGGCGCTGGTGGGTGAGTCAGGTTCAGGCAAAAGCGTTACCGCGCTGTCAATTTTACGCCTGCTCCCTTCCCCGCCGGTTGAATATCTCTCCGGCGATATTCGTTTTCATGGCGAATCGCTGCTTCACGCCAGCGATCAAACGTTGCGCGGTGTACGCGGTAATAAGATCGCCATGATTTTTCAGGAACCGATGGTGTCGTTAAATCCATTGCATACCCTGGAAAAACAGCTTTATGAAGTGCTTTCACTCCACCGCGGGATGCGTCGGGAAGCGGCTCGTGGCGAAATTCTTAACTGCCTTGATCGCGTTGGTATCCGCCAGGCGGCAAAACGGCTGACAGATTATCCGCATCAGCTCTCCGGCGGCGAACGGCAGCGGGTGATGATTGCGATGGCGCTGTTAACGCGACCGGAATTATTAATTGCCGATGAACCGACCACCGCACTGGACGTCTCTGTCCAGGCGCAGATTTTACAGCTGTTGCGCGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGTAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAACAGTGAACCGTCAGGCGATCCAGTGCCGTTGCCAGAACCTGCCTCAACGTTGCTGGATGTTGAACAGCTTCAGGTTGCCTTCCCCATTCGCAAAGGGATTTTGAAGCGCATTGTGGATCATAATGTGGTGGTGAAAAACATCAGTTTTACGCTACGAGCGGGTGAAACACTGGGTTTAGTGGGCGAGTCCGGTTCCGGGAAAAGTACGACGGGACTGGCGCTGCTGCGACTGATTAATTCTCAGGGCAGCATCATCTTTGACGGTCAGCCACTGCAAAATTTAAATCGCCGCCAGCTGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGA", + "dna_sequence_length": 1590, + "functions": [ + "microcin C ABC transporter ATPase" + ], + "id": "CDS_2166", + "location": [ + [ + "NC_000913", + 2276300, + "+", + 1590 + ] + ], + "md5": "74e517ba5dd285611d480fd831bf9fec", + "parent_gene": "", + "protein_md5": "016d161b172c0e84f2e421d3d71ef91e", + "protein_translation": "MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIILRQGEVVEQGPCARVFATPQQEYTRQLLALS", + "protein_translation_length": 529, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007214" + ], + [ + "gene_synonym", + "ECK2175" + ], + [ + "gene_synonym", + "EcoGene:EG12042" + ], + [ + "gene_synonym", + "GI:16130119" + ], + [ + "gene_synonym", + "GeneID:945319" + ], + [ + "gene_synonym", + "JW2169" + ], + [ + "gene_synonym", + "NP_416686.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD21" + ], + [ + "gene_synonym", + "b2181" + ], + [ + "gene_synonym", + "yejG" + ] + ], + "dna_sequence": "GTGACTTCATTACAACTCTCAATCGTCCATCGACTGCCGCAGAACTATCGCTGGTCTGCTGGTTTCGCAGGTTCGAAGGTTGAACCGATTCCGCAAAATGGACCGTGCGGTGACAACAGCCTGGTGGCGCTTAAATTGCTTAGCCCGGATGGTGATAATGCATGGTCGGTGATGTATAAACTAAGCCAGGCGTTAAGCGACATCGAAGTTCCATGTTCGGTGCTGGAGTGTGAAGGTGAGCCGTGCCTGTTTGTAAATCGCCAGGACGAGTTTGCTGCAACATGCCGATTGAAAAATTTTGGTGTGGCAATTGCCGAACCCTTTTCAAACTACAATCCTTTTTAA", + "dna_sequence_length": 345, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2167", + "location": [ + [ + "NC_000913", + 2278237, + "-", + 345 + ] + ], + "md5": "c0ee96572103d3f59c7673496a760b9f", + "parent_gene": "", + "protein_md5": "85d110fcb691b7a499d87f98acd9e2ce", + "protein_translation": "MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007221" + ], + [ + "gene_synonym", + "ECK2176" + ], + [ + "gene_synonym", + "EcoGene:EG11419" + ], + [ + "gene_synonym", + "GI:16130120" + ], + [ + "gene_synonym", + "GeneID:944808" + ], + [ + "gene_synonym", + "JW5363" + ], + [ + "gene_synonym", + "NP_416687.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28246" + ], + [ + "gene_synonym", + "b2182" + ], + [ + "gene_synonym", + "bcr" + ], + [ + "gene_synonym", + "bicA" + ], + [ + "gene_synonym", + "bicR" + ], + [ + "gene_synonym", + "sur" + ], + [ + "gene_synonym", + "suxA" + ] + ], + "dna_sequence": "GTGACCACCCGACAGCATTCGTCGTTTGCTATTGTTTTTATCCTTGGCCTGCTGGCCATGTTGATGCCGCTGTCGATTGATATGTATCTGCCCGCGCTACCGGTAATTTCAGCGCAGTTTGGCGTACCGGCGGGCAGTACGCAGATGACCCTCAGTACTTATATTCTGGGCTTTGCGTTGGGGCAGTTAATCTACGGGCCGATGGCAGACAGCTTCGGGCGTAAGCCGGTGGTGCTCGGCGGTACGCTGGTGTTTGCCGCCGCCGCGGTGGCGTGTGCGTTGGCAAACACCATCGATCAGCTGATTGTGATGCGTTTCTTCCACGGGCTGGCTGCGGCTGCGGCCAGCGTGGTCATTAACGCCCTGATGCGCGATATTTACCCGAAAGAAGAGTTCTCGCGGATGATGTCGTTTGTCATGCTGGTGACAACCATTGCACCGCTGATGGCACCGATAGTTGGCGGCTGGGTGCTGGTGTGGCTGAGCTGGCATTACATCTTCTGGATCCTGGCATTAGCGGCGATTCTGGCTTCGGCAATGATTTTCTTCCTGATTAAAGAAACCTTACCACCGGAGCGTCGTCAGCCATTTCACATTCGTACCACTATTGGTAACTTTGCGGCGCTGTTCCGCCATAAACGTGTCCTGAGCTACATGCTTGCCAGTGGTTTCAGCTTTGCCGGGATGTTCTCATTCTTAAGCGCCGGACCGTTTGTTTATATTGAAATTAACCACGTCGCGCCGGAAAACTTTGGTTATTACTTTGCGCTAAACATTGTTTTTCTGTTCGTGATGACCATCTTTAACAGCCGCTTCGTCCGCCGCATTGGCGCGTTAAATATGTTCCGCTCGGGGTTGTGGATACAATTTATTATGGCAGCGTGGATGGTCATCAGTGCGCTGCTGGGGCTGGGATTTTGGTCGCTGGTGGTTGGCGTTGCGGCGTTTGTGGGCTGCGTGTCGATGGTGTCATCCAATGCGATGGCGGTCATTCTTGATGAGTTTCCCCATATGGCGGGAACGGCATCTTCGCTGGCAGGAACCTTCCGTTTTGGCATAGGGGCAATTGTTGGCGCATTGCTTTCTCTTGCGACCTTTAACTCTGCATGGCCGATGATTTGGTCAATTGCATTCTGCGCAACCAGCTCCATTCTCTTCTGTCTGTACGCCAGTCGGCCGAAAAAACGGTGA", + "dna_sequence_length": 1191, + "functions": [ + "bicyclomycin/cysteine/sulfonamide efflux transporter" + ], + "id": "CDS_2168", + "location": [ + [ + "NC_000913", + 2279760, + "-", + 1191 + ] + ], + "md5": "5782e537d765303254bb84854455496e", + "parent_gene": "", + "protein_md5": "e66937b4a649fad008fbd62729aa16a5", + "protein_translation": "MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISALLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007223" + ], + [ + "gene_synonym", + "ECK2177" + ], + [ + "gene_synonym", + "EcoGene:EG12044" + ], + [ + "gene_synonym", + "GI:16130121" + ], + [ + "gene_synonym", + "GeneID:945378" + ], + [ + "gene_synonym", + "JW2171" + ], + [ + "gene_synonym", + "NP_416688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA43" + ], + [ + "gene_synonym", + "b2183" + ], + [ + "gene_synonym", + "rsuA" + ], + [ + "gene_synonym", + "yejD" + ] + ], + "dna_sequence": "ATGCGACTTGATAAATTTATCGCACAGCAACTCGGCGTTAGCCGTGCTATTGCCGGGCGTGAAATCCGCGGCAATCGTGTCACCGTCGATGGCGAAATCGTCCGTAATGCAGCGTTCAAACTGCTTCCTGAACATGATGTCGCTTACGATGGCAACCCGCTGGCGCAGCAACACGGTCCACGTTACTTCATGCTCAATAAGCCTCAGGGCTATGTTTGCTCCACGGACGACCCTGATCACCCAACGGTGCTCTATTTTCTTGATGAACCGGTAGCGTGGAAACTGCATGCGGCGGGGCGGTTGGATATTGATACCACCGGTCTGGTGCTGATGACTGATGATGGTCAGTGGTCGCACCGCATTACTTCTCCGCGCCATCATTGCGAGAAGACCTATCTGGTGACACTGGAATCACCTGTAGCTGACGATACGGCAGAGCAATTTGCTAAAGGCGTGCAGCTGCATAACGAAAAAGATCTCACTAAGCCTGCGGTGCTGGAAGTGATTACCCCAACGCAGGTTCGTCTGACCATCAGCGAAGGGCGTTATCATCAGGTGAAACGCATGTTCGCCGCCGTGGGTAACCACGTGGTTGAGCTGCATCGTGAACGTATTGGCGGTATTACGCTGGATGCTGATTTAGCCCCCGGTGAATATCGTCCGTTAACTGAAGAAGAAATTGCCAGCGTCGTCTAA", + "dna_sequence_length": 696, + "functions": [ + "16S rRNA pseudouridine(516) synthase" + ], + "id": "CDS_2169", + "location": [ + [ + "NC_000913", + 2280483, + "-", + 696 + ] + ], + "md5": "f209b59bc4209d9868a321b4908709f4", + "parent_gene": "", + "protein_md5": "fa03fcb61a8edc1b5b91fad4d162279e", + "protein_translation": "MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007228" + ], + [ + "gene_synonym", + "ECK2178" + ], + [ + "gene_synonym", + "EcoGene:EG12045" + ], + [ + "gene_synonym", + "GI:16130122" + ], + [ + "gene_synonym", + "GeneID:945529" + ], + [ + "gene_synonym", + "JW2172" + ], + [ + "gene_synonym", + "NP_416689.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33919" + ], + [ + "gene_synonym", + "b2184" + ], + [ + "gene_synonym", + "yejH" + ], + [ + "gene_synonym", + "yejI" + ], + [ + "gene_synonym", + "yejJ" + ] + ], + "dna_sequence": "ATGATTTTTACACTTCGCCCATATCAGCAAGAAGCCGTGGATGCCACGCTCAACCATTTTCGTCGTCATAAAACCCCTGCCGTTATCGTGCTGCCCACCGGCGCAGGTAAAAGCCTGGTGATAGCGGAACTGGCACGGCTGGCTCGTGGTCGCGTGCTGGTGCTGGCACACGTTAAAGAACTGGTGGCGCAAAACCATGCAAAGTATCAGGCGCTGGGGCTGGAAGCCGATATTTTTGCCGCCGGGCTAAAGCGCAAAGAGAGCCACGGTAAAGTGGTATTTGGCAGCGTGCAGTCTGTCGCCCGTAATCTTGATGCCTTTCAGGGTGAATTTTCGCTGTTGATTGTCGATGAATGTCACCGTATTGGTGACGATGAAGAGAGCCAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGATCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAACACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCTCACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACGGTCATCGCGAACAATGTGACTTCCGTTTCCGTTTTAAAAATTGCCCGCAATGTAACGCGGAAAACGATATTGCCGCCCGCCGCTGCCGCGAATGTGACACCGTACTGGTTGATCCGGACGATATGTTAAAAGCGGCGCTACGACTGAAAGACGCGCTGGTATTACGCTGTAGCGGCATGTCTTTGCAACATGGGCACGACGAGAAAGGCGAATGGTTGAAAATCACCTATTACGATGAAGACGGCGCGGATGTGAGTGAGCGTTTCCGTCTGCAAACACCTGCCCAGCGTACCGCCTTCGAGCAGCTTTTTATCCGCCCGCATACGCGCACACCGGGCATCCCGCTGCGCTGGATCACCGCCGCCGATATCCTCGCCCAGCAAGCCTTATTGCGACACCCGGATTTTGTCGTCGCCCGCATGAAAGGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAA", + "dna_sequence_length": 1761, + "functions": [ + "putative ATP-dependent DNA or RNA helicase" + ], + "id": "CDS_2170", + "location": [ + [ + "NC_000913", + 2280632, + "+", + 1761 + ] + ], + "md5": "5eaba426647f69f4c1310658d554bdbe", + "parent_gene": "", + "protein_md5": "681d45009ca4e9951c089933f991d05e", + "protein_translation": "MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRLAHELRG", + "protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007231" + ], + [ + "gene_synonym", + "ECK2179" + ], + [ + "gene_synonym", + "EcoGene:EG10885" + ], + [ + "gene_synonym", + "GI:16130123" + ], + [ + "gene_synonym", + "GeneID:945618" + ], + [ + "gene_synonym", + "JW2173" + ], + [ + "gene_synonym", + "NP_416690.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68919" + ], + [ + "gene_synonym", + "b2185" + ], + [ + "gene_synonym", + "rplY" + ] + ], + "dna_sequence": "ATGTTTACTATCAACGCAGAAGTACGTAAAGAGCAGGGTAAGGGTGCGAGCCGCCGCCTGCGTGCCGCTAACAAGTTCCCGGCAATCATCTACGGTGGCAAAGAAGCGCCGCTGGCTATCGAGCTGGATCACGACAAAGTCATGAACATGCAAGCTAAAGCTGAATTCTACAGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAA", + "dna_sequence_length": 285, + "functions": [ + "50S ribosomal subunit protein L25" + ], + "id": "CDS_2171", + "location": [ + [ + "NC_000913", + 2282517, + "+", + 285 + ] + ], + "md5": "eeb78866feb24d7d923d79c2b46d20a9", + "parent_gene": "", + "protein_md5": "f4f08edd306f448c81f9dd6169c602a6", + "protein_translation": "MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007234" + ], + [ + "gene_synonym", + "ECK2180" + ], + [ + "gene_synonym", + "EcoGene:EG12048" + ], + [ + "gene_synonym", + "GI:16130124" + ], + [ + "gene_synonym", + "GeneID:946690" + ], + [ + "gene_synonym", + "JW2174" + ], + [ + "gene_synonym", + "NP_416691.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33920" + ], + [ + "gene_synonym", + "b2186" + ], + [ + "gene_synonym", + "ndpA" + ], + [ + "gene_synonym", + "yejK" + ] + ], + "dna_sequence": "ATGAGTCTGGATATCAACCAGATTGCTCTGCACCAGCTTATCAAGCGTGATGAGCAGAACCTTGAGCTGGTGTTGCGCGATTCATTGCTGGAACCGACAGAAACCGTCGTTGAGATGGTGGCAGAACTGCATCGGGTCTATAGCGCCAAAAATAAAGCTTACGGCTTGTTTAGCGAAGAGAGTGAACTGGCGCAGACGCTGCGCTTACAGCGTCAGGGCGAAGAGGACTTCCTGGCATTTAGCCGCGCGGCAACCGGCCGCCTGCGTGACGAATTAGCGAAATATCCTTTTGCTGACGGTGGATTCGTGCTGTTTTGCCACTATCGCTATCTGGCGGTGGAGTATTTGCTGGTGGCAGTTCTGAGCAACCTGAGCAGTATGCGCGTTAACGAAAATCTCGACATCAACCCAACCCATTATCTTGATATCAATCATGCGGATATTGTTGCGCGTATCGATTTAACCGAATGGGAAACCAATCCAGAGTCCACCCGCTATCTCACTTTCCTGAAAGGGCGAGTAGGGCGCAAAGTGGCGGATTTCTTTATGGATTTCCTCGGGGCCAGCGAAGGGTTAAACGCGAAAGCGCAAAACCGTGGGCTGTTGCAAGCGGTTGATGATTTCACTGCCGAAGCACAACTGGATAAAGCAGAGCGACAGAACGTGCGCCAGCAGGTTTATAGCTACTGTAATGAGCAGCTGCAGGCAGGCGAAGAGATCGAACTGAAATCGCTGTCGAAAGAGCTGGCAGGCGTAAGCGAAGTGAGCTTCACGGAGTTTGCGGCTGAAAAAGGCTACGAACTGGAAGAGAGCTTCCCGGCAGACCGTAGCACACTGCGTCAGTTGACGAAGTTTGCCGGTAGCGGCGGTGGCTTGACTATTAACTTTGATGCGATGCTGTTAGGTGAACGCATCTTCTGGGATCCAGCAACCGATACCTTGACCATTAAAGGCACGCCGCCGAATTTGCGCGACCAATTGCAGCGCCGGACGTCTGGCGGCAATTAA", + "dna_sequence_length": 1008, + "functions": [ + "spermidine nucleoid-associated protein" + ], + "id": "CDS_2172", + "location": [ + [ + "NC_000913", + 2283947, + "-", + 1008 + ] + ], + "md5": "c94e744d4e8c3593af34568930f1dde4", + "parent_gene": "", + "protein_md5": "9be2c96a399f8a2736b461b69d22d4db", + "protein_translation": "MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN", + "protein_translation_length": 335, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007238" + ], + [ + "gene_synonym", + "ECK2181" + ], + [ + "gene_synonym", + "EcoGene:EG12043" + ], + [ + "gene_synonym", + "GI:16130125" + ], + [ + "gene_synonym", + "GeneID:946694" + ], + [ + "gene_synonym", + "JW2175" + ], + [ + "gene_synonym", + "NP_416692.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD24" + ], + [ + "gene_synonym", + "b2187" + ], + [ + "gene_synonym", + "yejL" + ] + ], + "dna_sequence": "ATGCCACAAATTTCCCGCTACAGTGATGAACAGGTTGAACAATTGCTCGCAGAGCTGCTCAACGTACTGGAAAAACATAAGGCTCCGACCGACCTTTCCCTGATGGTGTTAGGCAACATGGTCACTAACCTTATCAACACCAGCATTGCCCCGGCCCAACGCCAGGCAATTGCCAACTCTTTTGCCCGCGCCTTACAGTCCTCTATCAACGAAGACAAAGCGCACTAA", + "dna_sequence_length": 228, + "functions": [ + "UPF0352 family protein" + ], + "id": "CDS_2173", + "location": [ + [ + "NC_000913", + 2284129, + "+", + 228 + ] + ], + "md5": "8bb93ff0c9fdc7b67090a16e0b8498da", + "parent_gene": "", + "protein_md5": "36e730ae4c428e9a0ba546ba875139de", + "protein_translation": "MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANSFARALQSSINEDKAH", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007240" + ], + [ + "gene_synonym", + "ECK2182" + ], + [ + "gene_synonym", + "EcoGene:EG12049" + ], + [ + "gene_synonym", + "GI:16130126" + ], + [ + "gene_synonym", + "GeneID:946685" + ], + [ + "gene_synonym", + "JW2176" + ], + [ + "gene_synonym", + "NP_416693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD27" + ], + [ + "gene_synonym", + "b2188" + ], + [ + "gene_synonym", + "yejM" + ], + [ + "gene_synonym", + "yejN" + ] + ], + "dna_sequence": "ATGGTAACTCATCGTCAGCGCTACCGTGAAAAAGTCTCCCAGATGGTCAGTTGGGGGCACTGGTTTGCACTGTTCAATATTCTGCTTTCGCTCGTCATTGGCAGCCGTTACCTGTTTATCGCCGACTGGCCGACAACGCTTGCTGGTCGCATTTATTCCTACGTAAGCATTATCGGCCATTTCAGCTTCCTGGTGTTCGCCACCTACTTGCTGATCCTCTTCCCGCTGACCTTTATCGTCGGCTCCCAGAGGCTGATGAGGTTTTTGTCCGTCATTCTGGCAACGGCGGGAATGACGCTATTACTGATCGATAGCGAAGTCTTTACTCGTTTCCATCTCCATCTTAATCCCATCGTCTGGCAACTGGTTATCAACCCAGACGAAAATGAGATGGCGCGCGACTGGCAGCTGATGTTCATCAGCGTGCCGGTTATTTTATTGCTTGAACTGGTGTTTGCGACGTGGAGCTGGCAAAAGCTGCGCAGCCTGACGCGTCGTCGACGCTTCGCGCGCCCGCTGGCCGCATTCTTATTTATCGCCTTTATCGCCTCGCATGTGGTGTATATCTGGGCCGATGCCAACTTCTATCGCCCGATCACCATGCAGCGCGCTAACCTGCCGCTTTCGTACCCGATGACGGCGCGACGTTTTCTTGAGAAGCATGGTCTGCTTGATGCGCAGGAGTATCAACGCCGTCTTATTGAGCAAGGTAATCCAGACGCCGTTTCCGTTCAGTATCCGTTAAGCGAACTGCGCTATCGCGATATGGGCACCGGGCAGAATGTGCTGTTGATTACTGTCGATGGCCTGAACTACTCACGCTTCGAGAAGCAGATGCCTGCGCTGGCAGGTTTTGCTGAGCAAAATATTTCGTTCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTACGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGATCTGATGACGACGCTGATGCAACGCCTGCTACATGTCAGCACACCTGCCAGCGAATATTCGCAAGGTCAGGATTTGTTCAACCCTCAACGCCGTCATTACTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAACTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGA", + "dna_sequence_length": 1761, + "functions": [ + "essential inner membrane DUF3413 domain-containing protein", + "lipid A production and membrane permeability factor" + ], + "id": "CDS_2174", + "location": [ + [ + "NC_000913", + 2284376, + "+", + 1761 + ] + ], + "md5": "e9a087257fdb5c1b2eadce17eaeef19e", + "parent_gene": "", + "protein_md5": "050e85c2c0280cdc84a4e429da1237a5", + "protein_translation": "MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN", + "protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007244" + ], + [ + "gene_synonym", + "ECK2184" + ], + [ + "gene_synonym", + "EcoGene:EG12051" + ], + [ + "gene_synonym", + "GeneID:946867" + ], + [ + "gene_synonym", + "JW5839" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33924" + ], + [ + "gene_synonym", + "b2190" + ], + [ + "gene_synonym", + "yejO" + ] + ], + "dna_sequence": "ATGCATCAATCTGGTTCTGTTTCTCTTTGTCGTTCCGCAATATCTGTTCTGGTGGCTACAGCGTTATATTCACCCATAGCATTGGCATCAACTGTTGAGTATGGTGAGACAGTTGATGGTGTTGTCCTGGAAAAAGATATCCAGCTGGTTTATGGGACCGCCAATAATACGAAAATCAATCCTGGCGGAGAACAGCATATAAAAGAATTTGGTGTAAGTAATAATACTGAAATTAACGGAGGGTATCAGTACATTGAAATGAATGGCGCCGCAGAATACTCAGTATTAAATGACGGTTATCAAATTGTTCAAATGGGTGGCGCGGCAAACCAGACTACGCTCAATAATGGTGTGCTACAGGTTTATGGCGCAGCGAATGATACCACGATTAAAGGCGGGCGCTTAATCGTTGAAAAAGATGGGGGGGCCGTCTTTGTCGCTATCGAAAAGGGAGGACTACTGGAGGTTAAAGAGGGGGGATTTGCATTTGCGGTAGATCAGAAAGCAGGCGGTGCTATTAAAACAACCACGCGGGCCATGGAGGTATTCGGAACAAACCGTCTCGGTCAGTTCGATATCAAGAATGGTATTGCTAATAATATGTTGTTGGAAAACGGCGGAAGTTTGCGAGTTGAAGAAAATGACTTCGCTTATAATACCACTGTAGATAGTGGCGGCTTACTGGAGGTTATGGATGGCGGGACTGTAACTGGCGTTGATAAAAAAGCAGGCGGAAAATTAATTGTCTCAACGAATGCGCTGGAAGTGAGTGGTCCAAACAGTAAAGGCCAATTTAGTATAAAAGATGGTGTGTCAAAAAATTATGAACTGGATGATGGTTCCGGGCTCATTGTTATGGAGGACACGCAGGCCATTGATACTATCCTTGATAAGCATGCCACTATGCAATCGCTGGGAAAGGATACTGGTACGAAAGTGCAGGCAAATGCGGTATATGATCTCGGTCGATCATATCAGAATGGAAGTATCACGTATTCCTCAAAAGCCATCTCTGAAAATATGGTTATCAACAATGGCCGCGCTAACGTCTGGGCTGGCACAATGGTTAACGTTTCAGTCAGAGGGAATGATGGCATTCTTGAGGTCATGAAGCCGCAAATAAATTATGCACCCGCAATGTTGGTGGGTAAGGTAGTGGTTTCTGAGGGCGCTTCTTTTAGAACGCATGGTGCCGTGGATACCAGCAAAGCGGACGTTTCGCTCGAAAATAGCGTATGGACCATCATTGCCGATATCACTACGACGAACCAAAACACCCTCCTCAACTTAGCCAACCTTGCGATGTCTGACGCAAATGTGATTATGATGGATGAGCCAGTGACTCGTTCATCAGTGACGGCAAGTGCGGAAAATTTCATTACGTTGACCACCAATACCCTGTCGGGAAACGGCAATTTTTATATGCGTACCGATATGGCTAATCATCAGAGCGATCAGCTCAACGTCACCGGTCAGGCAACAGGTGATTTCAAAATATTCGTGACGGACACCGGTGCCAGCCCGGCAGCAGGAGATAGCCTTACACTGGTAACAACGGGCGGCGGTGATGCTGCATTTACGTTGGGCAATGCCGGAGGCGTTGTTGATATCGGTACGTATGAATATACCTTGCTGGATAATGGCAACCATAGCTGGAGTCTGGCAGAGAATCGCGCGCAAATTACCCCTTCAACCACTGATGTGCTGAATATGGCGGCCGCACAACCGCTGGTATTTGATGCAGAACTGGACACCGTGCGTGAGCGTCTTGGTAGCGTAAAAGGCGTTAGTTACGATACGGCGATGTGGAGTTCGGCAATTAACACCCGCAACAACGTGACCACTGATGCGGGAGCTGGTTTTGAGCAAACATTGACGGGCCTGACGCTCGGTATCGATAGCCGTTTCTCCCGTGAAGAAAGCAGTACAATTCGCGGCTTGATCTTTGGTTACTCTCATTCTGATATTGGTTTTGATCGCGGCGGCAAAGGTAATATCGATAGCTATACCCTGGGGGCTTATGCCGGTTGGGAGCATCAGAACGGTGCCTATGTTGATGGGGTGGTGAAAGTTGACCGTTTTGCCAACACCATCCATGGCAAGATGAGTAATGGGGCAACAGCGTTTGGCGATTACAATAGTAACGGCGCGGGTGCTCATGTTGAGAGCGGGTTCCGTTGGGTTGACGGATTGTGGAGTGTTAGACCCTATCTGGCCTTTACCGGCTTTACCACAGATGGTCAGGACTACACGTTATCAAACGGCATGCGCGCGGATGTGGGAAATACCCGGATATTACGCGCTGAAGCGGGAACGGCGGTAAGCTATCACATGGACCTGCAAAACGGTACGACGCTGGAACCCTGGCTGAAAGCGGCCGTGCGTCAGGAATACGCCGATTCTAACCAGGTGAAAGTTAATGACGATGGCAAATTTAATAATGATGTGGCTGGAACCAGTGGCGTTTATCAGGCTGGTATAAGGTCATCGTTTACCCCGACGTTAAGCGGTCATTTGTCAGTCAGCTATGGCAATGGCGCAGGGGTAGAATCGCCGTGGAATACTCAGGCGGGTGTGGTCTGGACGTTCTGA", + "dna_sequence_length": 2592, + "id": "CDS_2175", + "location": [ + [ + "NC_000913", + 2290180, + "-", + 67 + ], + [ + "NC_000913", + 2288914, + "-", + 2525 + ] + ], + "md5": "f69a828bbd06c075cee0a7015464d3c2", + "parent_gene": "", + "protein_md5": "ee3d295ae71851b8869e0782746ae11b", + "protein_translation": "MHQSGSVSLCRSAISVLVATALYSPIALASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSNNTEINGGYQYIEMNGAAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDTTIKGGRLIVEKDGGAVFVAIEKGGLLEVKEGGFAFAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGPNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDKHATMQSLGKDTGTKVQANAVYDLGRSYQNGSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF", + "protein_translation_length": 863, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007252" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16130129" + ], + [ + "gene_synonym", + "GeneID:949121" + ], + [ + "gene_synonym", + "NP_416696.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE55" + ], + [ + "gene_synonym", + "b2192" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_2176", + "location": [ + [ + "NC_000913", + 2290081, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007259" + ], + [ + "gene_synonym", + "ECK2185" + ], + [ + "gene_synonym", + "EcoGene:EG11527" + ], + [ + "gene_synonym", + "GI:16130130" + ], + [ + "gene_synonym", + "GeneID:949081" + ], + [ + "gene_synonym", + "JW2181" + ], + [ + "gene_synonym", + "NP_416697.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31802" + ], + [ + "gene_synonym", + "b2193" + ], + [ + "gene_synonym", + "narP" + ] + ], + "dna_sequence": "ATGCCTGAAGCAACACCTTTTCAGGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATACTCTCAATGCCTTGCGCAGGGATGGCGTTACCGCGCAAATTATTATCCTGACCGTATCCGATGCCTCCAGCGATGTCTTTGCGCTGATAGACGCAGGCGCAGACGGTTATCTGTTGAAAGACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAA", + "dna_sequence_length": 648, + "functions": [ + "response regulator in two-component regulatory system with NarQ" + ], + "id": "CDS_2177", + "location": [ + [ + "NC_000913", + 2290500, + "+", + 648 + ] + ], + "md5": "0ed3deec5e61cf7063d1260a97740cfe", + "parent_gene": "", + "protein_md5": "0dc53922f09befddefb5df758b5db0ee", + "protein_translation": "MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007262" + ], + [ + "gene_synonym", + "ECK2186" + ], + [ + "gene_synonym", + "EcoGene:EG12052" + ], + [ + "gene_synonym", + "GI:16130131" + ], + [ + "gene_synonym", + "GeneID:946623" + ], + [ + "gene_synonym", + "JW2182" + ], + [ + "gene_synonym", + "NP_416698.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABM9" + ], + [ + "gene_synonym", + "b2194" + ], + [ + "gene_synonym", + "ccmH" + ], + [ + "gene_synonym", + "yejP" + ] + ], + "dna_sequence": "ATGAGGTTTTTATTGGGCGTGCTGATGCTGATGATCTCCGGCTCAGCGCTGGCGACCATCGATGTGTTGCAGTTTAAAGATGAAGCACAGGAACAACAGTTCCGTCAGCTCACTGAAGAACTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGATTCCAACTCGATGATTGCCACCGACCTGCGTCAGAAAGTGTATGAACTGATGCAGGAAGGTAAAAGTAAAAAAGAGATTGTCGATTATATGGTGGCGCGTTACGGCAACTTCGTCACTTACGATCCGCCGTTAACGCCGCTGACCGTGCTGCTGTGGGTGCTGCCAGTAGTGGCTATTGGCATTGGCGGTTGGGTCATATACGCCCGCTCGCGGCGTCGGGTACGCGTGGTGCCGGAAGCGTTTCCTGAACAAAGCGTGCCGGAAGGTAAGCGTGCCGGATATGTTGTTTATCTGCCGGGTATTGTGGTGGCGTTAATTGTGGCTGGCGTCAGCTACTACCAGACTGGCAATTATCAGCAGGTGAAAATCTGGCAGCAGGCCACGGCACAGGCTCCGGCGTTGCTGGACAGGGCGCTGGATCCGAAAGCCGATCCGCTCAACGAAGAAGAGATGTCGCGTCTTGCGCTGGGGATGCGTACTCAACTGCAAAAAAATCCGGGAGATATAGAAGGCTGGATTATGTTGGGCCGCGTTGGCATGGCGCTGGGTAACGCCAGTATCGCCACCGATGCATACGCCACTGCGTATCGCCTCGATCCGAAAAACAGTGATGCTGCACTGGGATACGCTGAAGCGTTGACTCGTTCATCTGATCCCAACGACAACCGCCTCGGCGGTGAACTGCTACGTCAGCTGGTGAGAACGGACCATAGCAATATCCGTGTGCTAAGCATGTATGCGTTTAATGCCTTTGAGCAGCAGCGATTTGGCGAAGCCGTTGCCGCGTGGGAGATGATGTTGAAACTCTTACCTGCCAACGATACTCGCCGTGCGGTGATTGAACGTAGTATCGCGCAGGCGATGCAACATTTGTCGCCGCAGGAGAGTAAATAA", + "dna_sequence_length": 1053, + "functions": [ + "heme lyase, CcmH subunit" + ], + "id": "CDS_2178", + "location": [ + [ + "NC_000913", + 2292410, + "-", + 1053 + ] + ], + "md5": "f7018b5bb9b160f0a16bf8410019cc18", + "parent_gene": "", + "protein_md5": "f1802769da8c9cc2c67c3a32eecbac06", + "protein_translation": "MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007264" + ], + [ + "gene_synonym", + "ECK2187" + ], + [ + "gene_synonym", + "EcoGene:EG12053" + ], + [ + "gene_synonym", + "GI:16130132" + ], + [ + "gene_synonym", + "GeneID:949073" + ], + [ + "gene_synonym", + "JW2183" + ], + [ + "gene_synonym", + "NP_416699.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA86" + ], + [ + "gene_synonym", + "b2195" + ], + [ + "gene_synonym", + "ccmG" + ], + [ + "gene_synonym", + "dsbE" + ], + [ + "gene_synonym", + "yejQ" + ] + ], + "dna_sequence": "ATGAAGCGCAAAGTATTGTTAATTCCGTTGATTATCTTCCTGGCGATTGCCGCGGCGCTGCTGTGGCAGCTGGCGCGTAATGCCGAAGGGGATGATCCGACCAATCTGGAATCGGCGCTCATTGGCAAGCCTGTGCCGAAGTTTCGTCTCGAATCACTGGACAATCCGGGGCAGTTTTATCAGGCGGATGTGCTGACTCAGGGCAAACCAGTACTGCTTAACGTCTGGGCGACCTGGTGTCCGACCTGCCGTGCGGAACATCAATATCTGAATCAGCTTTCTGCGCAGGGCATCCGCGTGGTCGGCATGAACTATAAAGACGATCGCCAGAAGGCAATCAGCTGGCTGAAAGAGCTGGGCAATCCTTACGCGCTAAGCCTGTTTGATGGCGATGGCATGTTAGGGCTGGATCTCGGTGTCTATGGCGCGCCAGAAACGTTTCTTATTGACGGCAACGGCATCATTCGCTATCGCCATGCGGGCGATCTGAATCCTCGCGTCTGGGAAGAAGAGATCAAGCCGCTGTGGGAGAAATACAGTAAGGAGGCCGCACAATGA", + "dna_sequence_length": 558, + "functions": [ + "periplasmic thioredoxin of cytochrome c-type biogenesis" + ], + "id": "CDS_2179", + "location": [ + [ + "NC_000913", + 2292964, + "-", + 558 + ] + ], + "md5": "76ab8c5b5fb79e42d588d9059da23d2b", + "parent_gene": "", + "protein_md5": "8d77f686c066c4296f8b5f002af8963f", + "protein_translation": "MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSKEAAQ", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007269" + ], + [ + "gene_synonym", + "ECK2188" + ], + [ + "gene_synonym", + "EcoGene:EG12054" + ], + [ + "gene_synonym", + "GI:16130133" + ], + [ + "gene_synonym", + "GeneID:948783" + ], + [ + "gene_synonym", + "JW2184" + ], + [ + "gene_synonym", + "NP_416700.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33927" + ], + [ + "gene_synonym", + "b2196" + ], + [ + "gene_synonym", + "ccmF" + ], + [ + "gene_synonym", + "yejR" + ] + ], + "dna_sequence": "ATGATGCCAGAAATTGGTAACGGACTGCTGTGCCTGGCGCTGGGAATTGCGCTGCTGCTGTCCGTGTATCCGCTATGGGGCGTGGCGCGCGGAGATGCGCGCATGATGGCGTCTTCCCGCTTGTTTGCCTGGCTGCTGTTTATGTCTGTGGCTGGCGCATTTCTGGTGCTGGTCAATGCTTTCGTGGTCAACGACTTCACCGTCACCTATGTTGCCAGCAACTCCAATACCCAGCTTCCGGTGTGGTATCGCGTGGCGGCTACCTGGGGCGCGCATGAAGGCTCGCTACTGCTGTGGGTGCTGCTGATGAGCGGCTGGACCTTTGCGGTGGCGATTTTTAGTCAGCGTATTCCGCTGGATATTGTGGCCCGTGTACTGGCGATAATGGGGATGGTCAGTGTCGGCTTTTTGCTGTTCATTCTCTTTACCTCTAACCCGTTCTCTCGCACGTTGCCGAACTTCCCGATTGAAGGTCGCGATCTTAACCCGCTATTGCAGGATCCGGGGCTGATCTTCCATCCGCCTCTGCTTTATATGGGGTACGTGGGTTTCTCGGTGGCGTTTGCTTTTGCCATTGCTTCTTTGCTGAGCGGGCGTCTGGACAGCACTTATGCGCGTTTTACTCGTCCGTGGACGCTGGCAGCGTGGATCTTCCTGACGCTCGGCATCGTGCTCGGTTCCGCATGGGCCTATTACGAACTCGGCTGGGGTGGCTGGTGGTTCTGGGATCCGGTAGAAAACGCCTCGTTTATGCCGTGGCTGGTGGGGACTGCGCTGATGCACTCACTGGCGGTCACTGAACAACGCGCCAGCTTCAAAGCGTGGACATTACTGCTGGCAATCAGTGCCTTCTCGTTGTGTCTGTTGGGGACTTTCCTCGTGCGTTCCGGCGTGCTGGTATCGGTACACGCGTTTGCGTCTGATCCGGCGCGCGGTATGTTTATCCTCGCCTTTATGGTGCTGGTGATTGGCGGTTCGCTGCTGCTGTTTGCCGCGCGTGGACACAAAGTTCGCTCACGCGTAAACAATGCGCTGTGGTCGCGGGAATCTTTGCTGTTAGCGAACAATGTTTTGCTGGTCGCTGCGATGCTGGTGGTGTTGCTGGGGACGCTGCTGCCGTTGGTGCATAAGCAACTGGGACTGGGCAGTATTTCGATTGGCGAACCGTTCTTCAACACCATGTTTACCTGGCTGATGGTGCCGTTTGCGCTACTGCTTGGTGTCGGTCCTCTGGTGCGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTATTGATTATCGCCTTCATCTCTACGCTGGTGCTGTCGCTGCTGTTGCCGTGGCTGTTCGAAAGCAAAGTTGTGGCGATGACGGTGCTCGGCCTGGCAATGGCCTGCTGGATTGCGGTGCTGGCAATTGCGGAAGCTGCGCTACGTATTTCACGCGGCACGAAAACCACCTTCAGTTATTGGGGGATGGTGGCGGCTCACCTTGGGCTGGCAGTGACAATTGTTGGCATTGCCTTTAGCCAGAACTATAGCGTTGAGCGTGATGTGCGCATGAAGTCCGGCGATAGCGTCGATATTCATGAATATCGCTTCACCTTCCGTGATGTCAAAGAGGTGACTGGCCCGAACTGGCGTGGCGGTGTGGCGACTATCGGCGTAACGCGCGATGGCAAGCCGGAAACGGTGCTGTATGCGGAAAAACGTTATTACAACACTGCCGGGTCGATGATGACCGAAGCGGCAATTGACGGCGGCATCACGCGTGACCTGTACGCGGCCCTCGGTGAAGAGCTGGAAAACGGCGCGTGGGCCGTGCGTCTTTACTACAAACCATTTGTTCGCTGGATTTGGGCGGGCGGGCTGATGATGGCGTTGGGCGGACTGCTGTGTCTGTTTGATCCTCGCTATCGTAAGCGCGTGAGTCCGCAAAAAACTGCGCCGGAGGCCGTATGA", + "dna_sequence_length": 1944, + "functions": [ + "heme lyase, CcmF subunit" + ], + "id": "CDS_2180", + "location": [ + [ + "NC_000913", + 2294904, + "-", + 1944 + ] + ], + "md5": "796de08d90b53a6f8f6ffefd36e45226", + "parent_gene": "", + "protein_md5": "18316fe1e7264d96be57ce14eba0d60e", + "protein_translation": "MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV", + "protein_translation_length": 647, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007271" + ], + [ + "gene_synonym", + "ECK2189" + ], + [ + "gene_synonym", + "EcoGene:EG12055" + ], + [ + "gene_synonym", + "GI:16130134" + ], + [ + "gene_synonym", + "GeneID:946697" + ], + [ + "gene_synonym", + "JW2185" + ], + [ + "gene_synonym", + "NP_416701.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69490" + ], + [ + "gene_synonym", + "b2197" + ], + [ + "gene_synonym", + "ccmE" + ], + [ + "gene_synonym", + "yejS" + ] + ], + "dna_sequence": "ATGAATATTCGCCGTAAAAACCGCTTGTGGATTGCCTGTGCCGTGTTGGCAGGGCTGGCGCTGACTATCGGTCTGGTGCTATATGCGCTGCGCTCGAATATCGATCTCTTTTATACGCCGGGGGAAATTCTCTACGGCAAGCGTGAAACTCAGCAAATGCCGGAAGTCGGTCAGCGTCTGCGCGTTGGCGGGATGGTGATGCCGGGTAGTGTGCAGCGCGATCCCAATTCGCTGAAAGTGACCTTCACCATTTACGATGCTGAAGGCTCAGTGGATGTCTCTTACGAAGGCATTTTGCCGGATCTGTTCCGTGAAGGGCAGGGCGTTGTGGTGCAGGGCGAACTGGAAAAAGGCAATCATATCCTCGCGAAAGAAGTGCTGGCGAAACACGATGAAAACTATACGCCGCCAGAAGTTGAGAAAGCGATGGAAGCTAACCACCGTCGCCCGGCGAGTGTTTATAAGGACCCAGCATCATGA", + "dna_sequence_length": 480, + "functions": [ + "periplasmic heme chaperone" + ], + "id": "CDS_2181", + "location": [ + [ + "NC_000913", + 2295380, + "-", + 480 + ] + ], + "md5": "510f298c61fcbf984a19d7cd9c310ca0", + "parent_gene": "", + "protein_md5": "c75bff5d958d3809695d48d596226a11", + "protein_translation": "MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007273" + ], + [ + "gene_synonym", + "ECK2190" + ], + [ + "gene_synonym", + "EcoGene:EG12169" + ], + [ + "gene_synonym", + "GI:16130135" + ], + [ + "gene_synonym", + "GeneID:946709" + ], + [ + "gene_synonym", + "JW2186" + ], + [ + "gene_synonym", + "NP_416702.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABM5" + ], + [ + "gene_synonym", + "b2198" + ], + [ + "gene_synonym", + "ccmD" + ], + [ + "gene_synonym", + "yojM" + ] + ], + "dna_sequence": "ATGACCCCTGCATTTGCTTCCTGGAATGAATTTTTCGCAATGGGCGGTTACGCCTTTTTTGTCTGGCTGGCGGTGGTGATGACCGTTATTCCGCTGGTGGTTTTGGTCGTGCACTCGGTGATGCAACATCGCGCAATTCTGCGTGGCGTGGCGCAACAGCGGGCGCGTGAGGCGCGTTTACGTGCTGCGCAACAGCAGGAGGCTGCATGA", + "dna_sequence_length": 210, + "functions": [ + "cytochrome c biogenesis protein", + "heme export ABC transporter holo-CcmE release factor" + ], + "id": "CDS_2182", + "location": [ + [ + "NC_000913", + 2295586, + "-", + 210 + ] + ], + "md5": "5d118273f4dcda4a81e1ef7ebc4e6ddd", + "parent_gene": "", + "protein_md5": "d307ccb7224a87bc3686037bd68ee470", + "protein_translation": "MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007275" + ], + [ + "gene_synonym", + "ECK2191" + ], + [ + "gene_synonym", + "EcoGene:EG12057" + ], + [ + "gene_synonym", + "GI:16130136" + ], + [ + "gene_synonym", + "GeneID:946703" + ], + [ + "gene_synonym", + "JW2187" + ], + [ + "gene_synonym", + "NP_416703.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABM1" + ], + [ + "gene_synonym", + "b2199" + ], + [ + "gene_synonym", + "ccmC" + ], + [ + "gene_synonym", + "yejT" + ], + [ + "gene_synonym", + "yejU" + ] + ], + "dna_sequence": "ATGTGGAAAACACTGCATCAACTGGCGATCCCACCACGGCTGTATCAAATCTGTGGCTGGTTTATACCGTGGCTGGCAATTGCCAGTGTGGTCGTGCTTACCGTCGGCTGGATCTGGGGATTCGGCTTTGCTCCGGCTGATTATCAGCAGGGAAATAGCTACCGCATTATCTACCTGCATGTGCCTGCGGCGATCTGGTCGATGGGCATTTATGCATCAATGGCAGTGGCAGCGTTTATTGGCCTTGTCTGGCAGATGAAAATGGCCAACCTGGCGGTGGCGGCGATGGCCCCCATTGGTGCCGTGTTTACCTTTATTGCCCTGGTTACCGGCTCTGCATGGGGAAAACCGATGTGGGGCACCTGGTGGGTATGGGATGCACGTCTGACTTCTGAACTGGTGCTGCTGTTTTTGTATGTGGGTGTGATTGCCCTGTGGCACGCCTTCGACGACCGCCGTCTGGCGGGCCGTGCGGCAGGTATCCTGGTGCTGATTGGCGTGGTGAATCTGCCGATTATTCATTACTCCGTGGAGTGGTGGAACACCCTGCATCAGGGATCAACGCGGATGCAGCAAAGTATCGATCCGGCGATGCGTTCGCCGCTGCGCTGGTCGATTTTTGGCTTCCTGCTCCTGTCTGCCACGCTGACGCTGATGCGGATGCGTAATTTGATTTTGCTGATGGAAAAACGCCGTCCGTGGGTGAGTGAACTGATACTGAAAAGAGGCCGTAAATGA", + "dna_sequence_length": 738, + "functions": [ + "heme export ABC transporter permease", + "CcmE-interacting protein" + ], + "id": "CDS_2183", + "location": [ + [ + "NC_000913", + 2296320, + "-", + 738 + ] + ], + "md5": "d48eddea5b315fc529863b63797f6ff2", + "parent_gene": "", + "protein_md5": "6d7d675f418d05c29874944be89efc88", + "protein_translation": "MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007277" + ], + [ + "gene_synonym", + "ECK2192" + ], + [ + "gene_synonym", + "EcoGene:EG12058" + ], + [ + "gene_synonym", + "GI:16130137" + ], + [ + "gene_synonym", + "GeneID:946692" + ], + [ + "gene_synonym", + "JW2188" + ], + [ + "gene_synonym", + "NP_416704.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABL8" + ], + [ + "gene_synonym", + "b2200" + ], + [ + "gene_synonym", + "ccmB" + ], + [ + "gene_synonym", + "yejV" + ] + ], + "dna_sequence": "ATGATGTTCTGGCGCATTTTCCGTCTTGAGCTGCGTGTAGCGTTTCGCCATAGCGCCGAAATCGCCAACCCGCTGTGGTTCTTCCTGATTGTAATTACCCTTTTTCCGCTCAGTATCGGTCCGGAGCCGCAACTGCTGGCGCGTATTGCACCGGGCATTATCTGGGTTGCTGCGCTGCTTTCATCCTTGCTGGCGCTGGAACGACTGTTCCGTGACGATTTGCAGGACGGCAGTCTTGAACAATTGATGTTGTTGCCGTTACCCTTGCCCGCCGTTGTGCTGGCGAAGGTGATGGCGCACTGGATGGTAACCGGTCTGCCGTTACTCATCCTTTCGCCACTGGTAGCAATGCTACTGGGAATGGATGTTTATGGCTGGCAAGTGATGGCGCTGACGCTGCTGCTGGGAACGCCTACGCTTGGCTTTCTCGGTGCACCGGGCGTGGCGCTGACAGTGGGACTTAAGCGCGGTGGTGTGCTGCTCAGCATACTGGTGTTACCGCTGACTATCCCATTACTCATCTTTGCCACCGCCGCGATGGACGCGGCTTCTATGCATTTGCCCGTTGACGGGTATCTGGCAATTTTAGGCGCGTTGCTGGCAGGCACCGCGACATTAAGTCCTTTTGCGACGGCGGCAGCGTTACGAATCAGCATTCAATAA", + "dna_sequence_length": 663, + "functions": [ + "heme export ABC transporter permease" + ], + "id": "CDS_2184", + "location": [ + [ + "NC_000913", + 2297024, + "-", + 663 + ] + ], + "md5": "bff395d949c8ffd2a038906489d798bb", + "parent_gene": "", + "protein_md5": "a5cdfba447e7093ce9dc19120de5ade9", + "protein_translation": "MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007279" + ], + [ + "gene_synonym", + "ECK2193" + ], + [ + "gene_synonym", + "EcoGene:EG12059" + ], + [ + "gene_synonym", + "GI:90111402" + ], + [ + "gene_synonym", + "GeneID:946714" + ], + [ + "gene_synonym", + "JW5366" + ], + [ + "gene_synonym", + "NP_416705.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33931" + ], + [ + "gene_synonym", + "b2201" + ], + [ + "gene_synonym", + "ccmA" + ], + [ + "gene_synonym", + "yejW" + ] + ], + "dna_sequence": "GTGGGTATGCTTGAAGCCAGAGAGTTACTTTGTGAGCGGGATGAACGAACCTTATTTAGTGGCTTGTCATTTACGCTGAACGCAGGAGAGTGGGTACAAATCACCGGTAGCAACGGCGCGGGGAAGACAACGCTTCTCCGTTTGCTGACGGGGTTGTCTCGCCCTGACGCAGGCGAGGTTCTCTGGCAAGGGCAGCCCTTGCATCAGGTACGCGACAGCTACCATCAAAACCTGTTATGGATAGGCCATCAGCCGGGGATCAAAACCCGGCTGACGGCGTTAGAAAATCTGCACTTTTATCATCGCGATGGCGATACCGCACAATGTCTGGAAGCCCTGGCGCAGGCCGGGCTTGCCGGATTCGAAGATATTCCTGTAAATCAGCTCTCGGCCGGGCAACAACGCCGCGTCGCTTTAGCGCGTCTGTGGCTGACCCGTGCCACGTTATGGATCCTCGACGAGCCTTTTACCGCGATTGACGTTAACGGTGTCGATCGTCTGACCCAGCGTATGGCGCAGCATACGGAGCAGGGGGGGATTGTGATTCTGACTACCCACCAGCCGCTCAACGTTGCTGAAAGTAAAATTCGCCGCATTTCACTGACGCAAACGAGGGCCGCATGA", + "dna_sequence_length": 624, + "functions": [ + "heme export ABC transporter ATPase" + ], + "id": "CDS_2185", + "location": [ + [ + "NC_000913", + 2297644, + "-", + 624 + ] + ], + "md5": "c21421a2d754c2070f9ed9d376f2475d", + "parent_gene": "", + "protein_md5": "4acc2710d7225bf479d2e75f9c427835", + "protein_translation": "MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007281" + ], + [ + "gene_synonym", + "ECK2194" + ], + [ + "gene_synonym", + "EcoGene:EG12060" + ], + [ + "gene_synonym", + "GI:16130139" + ], + [ + "gene_synonym", + "GeneID:946706" + ], + [ + "gene_synonym", + "JW2190" + ], + [ + "gene_synonym", + "NP_416706.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABL5" + ], + [ + "gene_synonym", + "b2202" + ], + [ + "gene_synonym", + "napC" + ], + [ + "gene_synonym", + "yejX" + ] + ], + "dna_sequence": "ATGGGAAATTCTGACCGTAAGCCTGGTCTGATTAAGCGCCTGTGGAAATGGTGGCGTACCCCCAGCCGTCTGGCGCTGGGGACGCTGCTGTTGATCGGTTTTGTTGGCGGCATCGTCTTCTGGGGTGGCTTTAACACCGGGATGGAAAAAGCCAATACCGAAGAGTTCTGCATTAGCTGCCACGAAATGCGCAACACGGTGTATCAGGAATACATGGATTCCGTGCACTACAACAACCGTAGCGGCGTCCGTGCGACCTGTCCGGATTGTCACGTTCCGCACGAGTTTGTGCCGAAGATGATACGCAAGCTCAAAGCAAGTAAAGAGCTGTATGGTAAAATTTTTGGCGTTATTGACACGCCGCAGAAATTTGAAGCTCATCGTCTGACGATGGCACAGAATGAGTGGCGGCGCATGAAGGACAATAACTCGCAGGAGTGCCGTAACTGTCACAACTTCGAGTATATGGATACAACCGCCCAGAAATCGGTTGCCGCGAAGATGCATGACCAGGCGGTGAAAGATGGGCAAACCTGTATTGATTGCCATAAAGGGATAGCGCACAAGCTGCCCGATATGCGTGAAGTCGAGCCAGGTTTTTAA", + "dna_sequence_length": 603, + "functions": [ + "quinol dehydrogenase, electron source for NapAB" + ], + "id": "CDS_2186", + "location": [ + [ + "NC_000913", + 2298259, + "-", + 603 + ] + ], + "md5": "9101fe23dce0461f1e1bfa7e8b4a28fe", + "parent_gene": "", + "protein_md5": "e7e732f195c2b45b50d9be60c9a66db8", + "protein_translation": "MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007283" + ], + [ + "gene_synonym", + "ECK2195" + ], + [ + "gene_synonym", + "EcoGene:EG12061" + ], + [ + "gene_synonym", + "GI:90111403" + ], + [ + "gene_synonym", + "GeneID:946698" + ], + [ + "gene_synonym", + "JW5367" + ], + [ + "gene_synonym", + "NP_416707.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABL3" + ], + [ + "gene_synonym", + "b2203" + ], + [ + "gene_synonym", + "napB" + ], + [ + "gene_synonym", + "yejY" + ] + ], + "dna_sequence": "ATGAAAAGCCATGACCTGAAGAAAGCGCTGTGTCAATGGACGGCGATGCTGGCCCTGGTGGTAAGCGGCGCGGTTTGGGCGGCTAATGGCGTCGATTTTAGCCAGTCGCCGGAAGTATCCGGGACACAGGAAGGGGCCATTCGGATGCCAAAAGAGCAGGATCGGATGCCGCTGAACTATGTGAATCAGCCGCCAATGATCCCGCATAGCGTTGAAGGTTATCAGGTAACGACCAATACCAATCGCTGCTTGCAGTGCCACGGTGTCGAAAGCTATCGCACCACTGGCGCGCCGCGTATCAGTCCTACTCACTTTATGGACAGCGACGGCAAAGTGGGCGCGGAAGTGGCTCCGCGTCGTTATTTCTGTCTGCAATGTCACGTACCGCAGGCCGATACCGCGCCAATCGTGGGGAATACCTTTACCCCATCAAAAGGTTACGGGAAATAA", + "dna_sequence_length": 450, + "functions": [ + "nitrate reductase, small, cytochrome C550 subunit, periplasmic" + ], + "id": "CDS_2187", + "location": [ + [ + "NC_000913", + 2298718, + "-", + 450 + ] + ], + "md5": "b572ed3df60d82de8c6c26431687f853", + "parent_gene": "", + "protein_md5": "c2016f296eb42227d9dfe25bc81b90e6", + "protein_translation": "MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007285" + ], + [ + "gene_synonym", + "ECK2196" + ], + [ + "gene_synonym", + "EcoGene:EG12062" + ], + [ + "gene_synonym", + "GI:16130141" + ], + [ + "gene_synonym", + "GeneID:945984" + ], + [ + "gene_synonym", + "JW2192" + ], + [ + "gene_synonym", + "NP_416708.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33934" + ], + [ + "gene_synonym", + "b2204" + ], + [ + "gene_synonym", + "napH" + ], + [ + "gene_synonym", + "yejZ" + ] + ], + "dna_sequence": "ATGGCAAATCGTAAACGTGACGCCGGGCGCGAGGCGCTGGAGAAAAAAGGCTGGTGGCGCAGTCACCGTTGGCTGGTGTTACGTCGCCTTTGTCAGTTCTTCGTGCTGGGGATGTTTTTGAGCGGTCCATGGTTTGGTGTGTGGATCTTGCACGGCAACTACAGCAGTAGCCTGTTATTCGACACCGTTCCGCTGACCGATCCGCTGATGACGCTGCAAAGTCTTGCCAGTGGTCATCTGCCTGCCACGGTGGCGTTGACCGGTGCGGTGATTATCACCGTGCTCTACGCCCTGGCGGGAAAGCGATTATTTTGCAGCTGGGTCTGCCCGCTGAACCCGATTACCGACTTAGCGAACTGGTTACGCAGGCGCTTTGACCTCAATCAGTCTGCGACGATCCCTCGCCACATTCGCTACGTGCTGTTGGTGGTCATTCTGGTGGGATCAGCCTTAACTGGCACGCTCATTTGGGAATGGATCAACCCCGTTTCTCTGATGGGGCGTAGCCTGGTAATGGGCTTCGGCAGCGGCGCGCTGCTTATTCTCGCGCTGTTTTTATTTGATCTACTGGTCGTTGAACACGGCTGGTGCGGGCACATTTGTCCGGTTGGCGCGCTGTATGGCGTGCTGGGTAGCAAAGGTGTGATTACCGTTGCGGCCACCGATCGGCAGAAATGTAACCGCTGTATGGATTGTTTTCATGTTTGCCCGGAACCGCATGTGCTACGTGCCCCGGTGCTGGATGAACAAAGCCCGGTGCAGGTCACCAGCCGCGATTGCATGACGTGCGGTCGCTGCGTGGATGTCTGTTCTGAGGATGTATTTACAATAACTACACGATGGAGTTCGGGAGCGAAATCATGA", + "dna_sequence_length": 864, + "functions": [ + "ferredoxin-type protein" + ], + "id": "CDS_2188", + "location": [ + [ + "NC_000913", + 2299578, + "-", + 864 + ] + ], + "md5": "073199b36603b54e2f9d2b3dabd4e8bc", + "parent_gene": "", + "protein_md5": "c0e1253dde259199d4f90ddcf37db47d", + "protein_translation": "MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWINPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWSSGAKS", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007287" + ], + [ + "gene_synonym", + "ECK2197" + ], + [ + "gene_synonym", + "EcoGene:EG12064" + ], + [ + "gene_synonym", + "GI:16130142" + ], + [ + "gene_synonym", + "GeneID:945544" + ], + [ + "gene_synonym", + "JW2193" + ], + [ + "gene_synonym", + "NP_416709.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAL3" + ], + [ + "gene_synonym", + "b2205" + ], + [ + "gene_synonym", + "napG" + ], + [ + "gene_synonym", + "yojA" + ], + [ + "gene_synonym", + "yojB" + ] + ], + "dna_sequence": "ATGTCCCGGTCAGCGAAACCTCAAAATGGTCGCCGCCGCTTTCTGCGCGATGTCGTTCGCACAGCAGGCGGGCTGGCTGCCGTGGGTGTGGCGCTGGGGTTACAACAGCAAACCGCACGCGCATCTGGCGTGCGGTTGCGCCCGCCCGGAGCCATAAACGAGAACGCCTTTGCCAGTGCCTGTGTGCGTTGCGGTCAGTGTGTTCAGGCTTGCCCTTACGACACCTTAAAACTGGCGACGCTGGCCTCTGGTCTGTCGGCGGGCACGCCATATTTTGTCGCACGGGATATTCCTTGCGAAATGTGTGAGGACATTCCGTGCGCCAAAGTGTGCCCAAGCGGTGCGCTGGATCGTGAGATTGAATCGATCGACGACGCGCGGATGGGGCTGGCGGTACTGGTGGACCAGGAAAACTGTCTCAACTTTCAGGGGCTGCGCTGCGATGTTTGTTATCGCGAATGCCCGAAAATTGATGAGGCCATCACCCTGGAGCTGGAGCGCAACACGCGTACCGGTAAGCACGCCCGCTTTCTGCCGACGGTTCACAGCGACGCCTGTACCGGTTGCGGTAAGTGCGAAAAAGTATGCGTGCTGGAACAACCGGCAATCAAGGTGTTACCGCTGTCACTGGCGAAAGGGGAGTTAGGTCACCATTACCGCTTCGGCTGGCTGGAGGGGAACAATGGCAAATCGTAA", + "dna_sequence_length": 696, + "functions": [ + "ferredoxin-type protein" + ], + "id": "CDS_2189", + "location": [ + [ + "NC_000913", + 2300260, + "-", + 696 + ] + ], + "md5": "ec5de38150d7f4c8f4cbf492ce10d49a", + "parent_gene": "", + "protein_md5": "ca994a507e551f1af2be17e8723917e9", + "protein_translation": "MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007289" + ], + [ + "gene_synonym", + "ECK2198" + ], + [ + "gene_synonym", + "EcoGene:EG12067" + ], + [ + "gene_synonym", + "GI:16130143" + ], + [ + "gene_synonym", + "GeneID:947093" + ], + [ + "gene_synonym", + "JW2194" + ], + [ + "gene_synonym", + "NP_416710.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33937" + ], + [ + "gene_synonym", + "b2206" + ], + [ + "gene_synonym", + "napA" + ], + [ + "gene_synonym", + "yojC" + ], + [ + "gene_synonym", + "yojD" + ], + [ + "gene_synonym", + "yojE" + ] + ], + "dna_sequence": "ATGAAACTCAGTCGTCGTAGCTTTATGAAAGCTAACGCCGTTGCGGCCGCTGCGGCGGCTGCCGGTCTCAGCGTGCCGGGCGTTGCCCGCGCCGTTGTTGGTCAGCAGGAAGCCATCAAATGGGATAAAGCGCCGTGCCGTTTCTGCGGTACTGGTTGCGGCGTTCTGGTCGGAACGCAGCAGGGACGTGTGGTGGCCTGTCAGGGCGACCCGGACGCACCGGTTAACCGTGGCCTGAACTGCATTAAGGGCTATTTCCTGCCCAAAATCATGTACGGTAAAGACCGTTTGACGCAGCCGCTGCTGCGTATGAAAAACGGTAAATATGACAAAGAAGGCGAATTTACCCCAATCACCTGGGATCAGGCCTTCGATGTGATGGAAGAGAAATTCAAAACCGCCCTGAAAGAAAAAGGGCCGGAATCGATCGGTATGTTCGGTTCTGGTCAGTGGACTATCTGGGAAGGTTATGCCGCGTCCAAGCTGTTTAAAGCGGGCTTCCGTTCGAACAACATCGACCCGAACGCGCGTCACTGTATGGCGTCGGCAGTAGTTGGCTTTATGCGTACCTTTGGTATGGATGAGCCGATGGGCTGCTATGACGACATCGAGCAGGCTGACGCGTTTGTGCTGTGGGGCGCAAACATGGCGGAAATGCACCCGATCCTCTGGTCGCGCATCACTAACCGTCGTCTCTCTAACCAGAACGTCACCGTGGCGGTGCTTTCTACCTACCAGCATCGTAGCTTCGAGCTGGCGGATAACGGCATCATCTTTACGCCGCAATCTGACCTGGTGATCCTGAACTACATCGCCAACTATATCATTCAAAACAATGCGATAAATCAGGACTTCTTCAGCAAGCACGTTAACCTGCGCAAAGGGGCGACGGACATCGGCTACGGTTTACGTCCGACCCATCCGCTGGAAAAAGCAGCGAAGAATCCGGGTTCTGACGCCTCCGAACCGATGAGCTTTGAAGATTACAAAGCCTTCGTTGCCGAGTATACGCTGGAAAAAACTGCCGAAATGACCGGCGTGCCGAAAGACCAGTTAGAACAACTGGCGCAGCTGTATGCCGATCCGAACAAGAAAGTCATCTCCTACTGGACGATGGGCTTCAACCAGCATACTCGTGGCGTGTGGGCTAACAACCTGGTCTACAACCTGCACCTGCTGACCGGCAAAATTTCCCAGCCGGGTTGCGGTCCGTTCTCCCTGACCGGGCAACCTTCTGCGTGTGGTACTGCGCGTGAAGTGGGCACCTTTGCTCACCGTCTGCCTGCGGACATGGTGGTGACCAACGAGAAACACCGTGATATCTGCGAGAAGAAGTGGAATATCCCGAGCGGCACCATTCCGGCGAAAATCGGTCTGCACGCGGTGGCACAAGACCGTGCGCTGAAAGACGGCAAACTGAATGTTTACTGGACCATGTGTACCAACAACATGCAGGCCGGGCCGAACATCAATGAAGAGCGTATGCCGGGCTGGCGCGATCCGCGCAACTTCATCATCGTCTCCGATCCGTATCCGACAGTCAGTGCGCTGGCCGCCGACTTGATCCTGCCGACCGCAATGTGGGTAGAGAAAGAGGGCGCTTACGGTAACGCCGAACGCCGTACTCAGTTCTGGCGTCAACAGGTACAGGCACCGGGCGAAGCGAAATCGGATCTCTGGCAGTTAGTCCAGTTCTCCCGCCGCTTCAAAACTGAAGAAGTATGGCCGGAAGATCTGCTGGCGAAGAAACCGGAACTGCGTGGCAAAACGCTGTACGAAGTGCTGTATGCCACACCGGAAGTGAGCAAATTCCCGGTATCCGAACTGGCGGAAGATCAGCTGAACGATGAATCCCGCGAGCTGGGCTTCTATCTGCAAAAAGGGCTGTTCGAAGAGTACGCATGGTTTGGTCGCGGTCACGGTCACGATCTGGCACCGTTCGATGACTACCACAAAGCGCGCGGTCTGCGCTGGCCGGTGGTGAACGGTAAAGAAACGCAGTGGCGTTACAGCGAAGGTAACGACCCGTACGTGAAAGCGGGCGAAGGCTATAAGTTCTACGGTAAACCGGATGGCAAAGCGGTGATCTTCGCACTGCCATTCGAACCGGCGGCGGAAGCACCGGATGAAGAGTACGACCTGTGGCTCTCTACCGGACGCGTTCTGGAGCACTGGCACACCGGCAGTATGACTCGCCGTGTACCAGAACTGCACCGCGCCTTCCCGGAAGCGGTCCTGTTTATTCACCCGCTGGATGCGAAAGCGCGCGATCTGCGCCGTGGCGACAAAGTGAAAGTGGTTTCTCGCCGTGGCGAAGTGATCTCGATTGTTGAAACGCGCGGTCGTAACCGTCCGCCACAGGGCCTGGTGTACATGCCGTTCTTCGACGCCGCACAGTTGGTTAACAAACTGACGCTGGATGCGACCGATCCGCTCTCGAAAGAGACGGACTTCAAGAAGTGCGCGGTCAAACTGGAGAAGGTGTAA", + "dna_sequence_length": 2487, + "functions": [ + "nitrate reductase, periplasmic, large subunit" + ], + "id": "CDS_2190", + "location": [ + [ + "NC_000913", + 2302753, + "-", + 2487 + ] + ], + "md5": "17bc2b77f3c8122a742b131ff0b15bca", + "parent_gene": "", + "protein_md5": "9443dd882ae7a95ae657f8450acca893", + "protein_translation": "MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNKLTLDATDPLSKETDFKKCAVKLEKV", + "protein_translation_length": 828, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007291" + ], + [ + "gene_synonym", + "ECK2199" + ], + [ + "gene_synonym", + "EcoGene:EG12143" + ], + [ + "gene_synonym", + "GI:16130144" + ], + [ + "gene_synonym", + "GeneID:945187" + ], + [ + "gene_synonym", + "JW2195" + ], + [ + "gene_synonym", + "NP_416711.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I5" + ], + [ + "gene_synonym", + "b2207" + ], + [ + "gene_synonym", + "napD" + ], + [ + "gene_synonym", + "yojF" + ] + ], + "dna_sequence": "ATGCACACTAACTGGCAAGTTTGCAGCCTGGTCGTGCAGGCCAAAAGCGAACGAATTTCAGACATCAGCACCCAACTGAACGCCTTTCCCGGCTGTGAAGTTGCTGTCAGCGACGCGCCGAGCGGTCAGTTGATTGTGGTGGTGGAAGCAGAAGACAGCGAAACGCTGATCCAAACCATTGAGTCAGTACGCAACGTAGAGGGCGTGCTGGCGGTGTCGCTGGTTTATCACCAGCAGGAAGAGCAAGGTGAGGAAACACCATGA", + "dna_sequence_length": 264, + "functions": [ + "assembly protein for periplasmic nitrate reductase" + ], + "id": "CDS_2191", + "location": [ + [ + "NC_000913", + 2303013, + "-", + 264 + ] + ], + "md5": "a13d3d3520884266a90b2defe1aac9b1", + "parent_gene": "", + "protein_md5": "6adef57f29618c27bdcb14c1b0c08dfe", + "protein_translation": "MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007293" + ], + [ + "gene_synonym", + "ECK2200" + ], + [ + "gene_synonym", + "EcoGene:EG12068" + ], + [ + "gene_synonym", + "GI:16130145" + ], + [ + "gene_synonym", + "GeneID:946813" + ], + [ + "gene_synonym", + "JW2196" + ], + [ + "gene_synonym", + "NP_416712.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAL0" + ], + [ + "gene_synonym", + "b2208" + ], + [ + "gene_synonym", + "napF" + ], + [ + "gene_synonym", + "yojG" + ] + ], + "dna_sequence": "GTGAAGATTGATGCATCCCGTCGGGGCATACTCACTGGTCGCTGGCGCAAAGCCAGTAACGGTATCCGTCCGCCCTGGTCCGGTGATGAATCTCATTTTCTGACCCATTGCACCCGCTGCGACGCCTGTATTAATGCTTGTGAAAACAACATTCTGCAACGCGGCGCGGGCGGCTATCCGAGCGTTAATTTCAAAAATAACGAGTGCAGCTTCTGTTACGCCTGCGCGCAGGCTTGCCCCGAATCGCTATTTTCTCCGCGCCACACCAGGGCCTGGGATTTGCAGTTCACCATCGGGGACGCGTGCCTGGCGTATCAGTCAGTTGAATGCCGCCGCTGTCAGGATAGCTGTGAGCCAATGGCAATTATCTTTCGCCCGACGCTCTCCGGGATCTACCAGCCGCAACTTAATAGCCAACTTTGCAACGGATGTGGAGCATGTGCAGCCAGCTGTCCGGTATCAGCCATAACTGCGGAGTATCTCCATGCACACTAA", + "dna_sequence_length": 495, + "functions": [ + "ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA" + ], + "id": "CDS_2192", + "location": [ + [ + "NC_000913", + 2303497, + "-", + 495 + ] + ], + "md5": "fa2847b0e499340cd0d82e1a89c7bf74", + "parent_gene": "", + "protein_md5": "0f0b78162321b65a29aab5d73a375452", + "protein_translation": "MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007297" + ], + [ + "gene_synonym", + "ECK2201" + ], + [ + "gene_synonym", + "EcoGene:EG10255" + ], + [ + "gene_synonym", + "GI:16130146" + ], + [ + "gene_synonym", + "GeneID:946700" + ], + [ + "gene_synonym", + "JW2197" + ], + [ + "gene_synonym", + "NP_416713.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23827" + ], + [ + "gene_synonym", + "b2209" + ], + [ + "gene_synonym", + "eco" + ], + [ + "gene_synonym", + "eti" + ] + ], + "dna_sequence": "ATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGAAGCGTCAGGTGATTCAGTTAACCCCGCAAGAAGATGAATCTACCCTGAAAGTAGAACTGTTAATCGGTCAGACGCTGGAAGTCGATTGCAATTTGCATCGTCTCGGCGGGAAGCTGGAAAACAAAACGCTGGAAGGCTGGGGCTATGATTATTATGTCTTTGATAAAGTCAGTTCCCCGGTTTCAACGATGATGGCCTGCCCGGATGGCAAGAAAGAGAAGAAATTTGTCACCGCGTATCTGGGCGATGCTGGAATGCTGCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAA", + "dna_sequence_length": 489, + "functions": [ + "ecotin, a serine protease inhibitor" + ], + "id": "CDS_2193", + "location": [ + [ + "NC_000913", + 2303905, + "+", + 489 + ] + ], + "md5": "c587c952d08a2a1cfb9333b0aefd79af", + "parent_gene": "", + "protein_md5": "52f8ff6d7ba88d7ba836b845ad79c30c", + "protein_translation": "MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007300" + ], + [ + "gene_synonym", + "ECK2202" + ], + [ + "gene_synonym", + "EcoGene:EG12069" + ], + [ + "gene_synonym", + "GI:16130147" + ], + [ + "gene_synonym", + "GeneID:946702" + ], + [ + "gene_synonym", + "JW2198" + ], + [ + "gene_synonym", + "NP_416714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33940" + ], + [ + "gene_synonym", + "b2210" + ], + [ + "gene_synonym", + "mqo" + ], + [ + "gene_synonym", + "yojH" + ] + ], + "dna_sequence": "ATGAAAAAAGTGACTGCCATGCTCTTCTCGATGGCCGTGGGGCTTAATGCCGTTTCGATGGCGGCAAAAGCGAAAGCGTCCGAGGAGCAGGAAACTGATGTACTGTTGATTGGCGGCGGCATTATGAGCGCCACGTTGGGGACCTATTTACGCGAGCTGGAGCCTGAATGGTCGATGACCATGGTGGAGCGCCTGGAGGGTGTCGCGCAGGAGAGTTCGAACGGCTGGAATAACGCCGGAACCGGGCATTCTGCACTGATGGAACTGAACTACACCCCGCAAAACGCCGATGGCAGCATCAGTATTGAAAAAGCAGTCGCCATTAACGAAGCATTTCAGATTTCCCGCCAGTTCTGGGCGCACCAGGTTGAGCGCGGCGTGCTGCGTACTCCGCGTTCATTTATCAATACCGTTCCGCATATGAGCTTTGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCAACTCAGCAGCGAAGTCCGCGCCCTAAAGCGTAATGACGATAACACCTGGACCGTTACCGTTGCCGATCTGAAAAATGGCACTGCACAGAACATTCGTGCCAAATTTGTCTTTATCGGCGCGGGCGGTGCGGCGCTGAAGCTGTTACAGGAATCGGGGATTCCGGAAGCGAAAGACTACGCCGGTTTCCCGGTGGGCGGACAGTTCCTTGTTTCGGAAAACCCGGACGTGGTTAATCACCATCTGGCGAAGGTTTACGGTAAAGCATCCGTTGGCGCACCACCGATGTCGGTTCCGCATATCGATACCCGCGTTCTGGACGGTAAACGCGTAGTGCTGTTTGGGCCATTTGCCACCTTCTCAACCAAATTCCTCAAAAACGGTTCATTGTGGGATCTAATGAGTTCCACCACCACCTCTAACGTGATGCCGATGATGCACGTCGGGCTGGATAATTTCGATCTGGTGAAATATCTGGTGAGTCAGGTGATGTTGAGTGAAGAGGATCGTTTTGAAGCGTTGAAAGAGTACTATCCGCAGGCGAAAAAAGAGGACTGGCGTTTGTGGCAAGCGGGGCAGCGCGTGCAGATTATCAAGCGTGATGCCGAGAAAGGTGGCGTACTGCGTCTGGGTACTGAAGTCGTCAGTGACCAGCAAGGAACCATTGCCGCGCTCCTGGGGGCATCGCCAGGGGCGTCAACCGCCGCGCCGATTATGTTGAATCTGCTGGAAAAAGTATTTGGCGATCGTGTTTCCAGCCCGCAATGGCAGGCTACGTTGAAAGCGATCGTTCCGTCTTATGGACGCAAGCTGAACGGTGATGTAGCGGCAACAGAACGCGAGTTGCAGTACACCAGCGAAGTGCTGGGGTTGAACTACGACAAGCCGCAGGCAGCAGATAGTACGCCGAAACCGCAGTTGAAACCGCAACCCGTTCAAAAAGAAGTGGCGGATATTGCGTTGTAA", + "dna_sequence_length": 1647, + "functions": [ + "malate dehydrogenase, FAD/NAD(P)-binding domain" + ], + "id": "CDS_2194", + "location": [ + [ + "NC_000913", + 2306754, + "-", + 1647 + ] + ], + "md5": "f5d3f85c2a96e6c43dddd0af15013c0d", + "parent_gene": "", + "protein_md5": "6396a0607d98e257f592f552af391638", + "protein_translation": "MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007303" + ], + [ + "gene_synonym", + "ECK2203" + ], + [ + "gene_synonym", + "EcoGene:EG12070" + ], + [ + "gene_synonym", + "GI:16130148" + ], + [ + "gene_synonym", + "GeneID:946705" + ], + [ + "gene_synonym", + "JW2199" + ], + [ + "gene_synonym", + "NP_416715.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33941" + ], + [ + "gene_synonym", + "b2211" + ], + [ + "gene_synonym", + "yojI" + ], + [ + "gene_synonym", + "yojJ" + ] + ], + "dna_sequence": "ATGGAACTTCTTGTACTTGTCTGGCGGCAGTATCGCTGGCCATTTATCAGTGTGATGGCGCTAAGCCTCGCCAGTGCGGCATTAGGCATTGGCTTAATTGCTTTTATCAATCAGCGCCTTATCGAAACGGCGGATACCAGTCTGCTGGTGTTGCCGGAGTTTCTGGGATTATTGCTGCTGTTGATGGCAGTCACTCTCGGATCGCAACTGGCGCTCACCACTTTGGGGCATCACTTCGTTTACCGACTGCGTAGTGAATTTATCAAGCGGATTCTGGATACTCACGTCGAGCGCATTGAACAACTCGGTAGCGCCTCGTTGCTGGCGGGGTTAACCAGCGATGTGCGCAATATCACCATTGCTTTTGTGCGTCTGCCGGAACTGGTGCAGGGGATCATTCTCACTATCGGTTCAGCGGCGTATCTGTGGATGCTGTCGGGCAAAATGTTGCTGGTAACGGCTATCTGGATGGCGATCACCATCTGGGGCGGTTTTGTGCTGGTGGCGCGGGTGTACAAACATATGGCGACCCTGCGTGAAACCGAAGACAAGCTGTACACGGATTTTCAAACTGTACTTGAAGGGCGCAAAGAGCTGACTCTGAACCGGGAACGCGCCGAGTATGTGTTTAACAACCTCTACATTCCTGATGCGCAAGAGTATCGCCACCATATTATTCGCGCAGACACCTTCCATCTTAGTGCCGTGAACTGGTCAAACATCATGATGCTGGGCGCAATCGGCCTGGTGTTCTGGATGGCGAACAGCCTCGGTTGGGCTGATACCAACGTTGCCGCGACCTATTCGTTGACGCTTTTATTCCTGCGTACGCCGCTGCTTTCGGCGGTTGGCGCATTGCCGACGCTGCTGACGGCGCAGGTGGCGTTTAACAAGCTGAACAAATTCGCGCTCGCGCCTTTCAAAGCAGAGTTTCCGCGCCCGCAGGCGTTTCCCAACTGGCAAACGCTGGAGCTGCGTAACGTGACGTTTGCTTATCAGGATAACGCGTTTTCCGTTGGTCCGATTAATCTCACCATCAAACGTGGCGAGCTGCTGTTTCTGATTGGCGGCAACGGTAGCGGAAAATCGACGCTGGCGATGTTGTTGACGGGCTTGTATCAGCCACAAAGCGGCGAAATCTTGCTGGATGGCAAACCTGTCAGCGGCGAACAACCGGAAGATTATCGCAAACTGTTTTCGGCAGTGTTTACCGATGTCTGGCTGTTTGATCAACTGCTGGGGCCGGAGGGTAAACCCGCTAACCCGCAACTGGTTGAGAAGTGGCTGGCGCAGCTGAAAATGGCTCATAAGCTTGAGTTAAGCAACGGGCGTATTGTTAACCTGAAGTTATCAAAAGGGCAGAAAAAACGCGTGGCGCTGTTGCTGGCGCTGGCAGAAGAACGCGATATTATCCTGCTGGATGAATGGGCGGCGGATCAGGATCCACACTTCCGTCGTGAGTTTTATCAGGTGTTGCTGCCGCTGATGCAGGAGATGGGTAAAACTATTTTCGCTATCAGTCATGATGATCATTACTTTATCCACGCCGACCGCCTGCTGGAAATGCGCAATGGGCAACTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAA", + "dna_sequence_length": 1644, + "functions": [ + "microcin J25 efflux ABC transporter permease/ATPase" + ], + "id": "CDS_2195", + "location": [ + [ + "NC_000913", + 2308615, + "-", + 1644 + ] + ], + "md5": "89d481ffa8dde82afe0ff95ea9168183", + "parent_gene": "", + "protein_md5": "d2a6aaa6ec86e6b5d5884f1483cfc96b", + "protein_translation": "MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFAYQDNAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKLSKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA", + "protein_translation_length": 547, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007308" + ], + [ + "gene_synonym", + "ECK2204" + ], + [ + "gene_synonym", + "EcoGene:EG10037" + ], + [ + "gene_synonym", + "GI:16130149" + ], + [ + "gene_synonym", + "GeneID:946708" + ], + [ + "gene_synonym", + "JW2200" + ], + [ + "gene_synonym", + "NP_416716.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05050" + ], + [ + "gene_synonym", + "aidD" + ], + [ + "gene_synonym", + "alkB" + ], + [ + "gene_synonym", + "b2212" + ] + ], + "dna_sequence": "ATGTTGGATCTGTTTGCCGATGCTGAACCGTGGCAAGAGCCACTGGCGGCTGGTGCGGTAATTTTACGGCGTTTTGCTTTTAACGCTGCGGAGCAACTGATCCGCGATATTAATGACGTTGCCAGCCAGTCGCCGTTTCGCCAGATGGTCACCCCCGGGGGATATACCATGTCGGTGGCGATGACCAACTGTGGGCATCTGGGCTGGACGACCCATCGGCAAGGTTATCTCTATTCGCCCATTGATCCGCAAACAAATAAACCGTGGCCCGCCATGCCACAGAGTTTTCATAATTTATGTCAACGTGCGGCTACGGCGGCGGGCTATCCAGATTTCCAGCCAGATGCTTGTCTTATCAACCGCTACGCTCCTGGCGCGAAACTGTCGCTGCATCAGGATAAAGACGAACCGGATCTGCGCGCGCCAATTGTTTCTGTTTCTCTGGGCTTACCCGCGATTTTTCAATTTGGCGGCCTGAAACGAAATGATCCGCTCAAACGTTTGTTGTTGGAACATGGCGATGTGGTGGTATGGGGCGGTGAATCGCGGCTGTTTTATCACGGTATTCAACCGTTGAAAGCGGGGTTTCATCCACTCACCATCGACTGCCGCTACAACCTGACATTCCGTCAGGCAGGTAAAAAAGAATAA", + "dna_sequence_length": 651, + "functions": [ + "oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions" + ], + "id": "CDS_2196", + "location": [ + [ + "NC_000913", + 2309341, + "-", + 651 + ] + ], + "md5": "f57e289aa307285ab8c18299efb2c6e2", + "parent_gene": "", + "protein_md5": "62196a7ab4e9074e1f8392a8799b6e44", + "protein_translation": "MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007311" + ], + [ + "gene_synonym", + "ECK2205" + ], + [ + "gene_synonym", + "EcoGene:EG10029" + ], + [ + "gene_synonym", + "GI:16130150" + ], + [ + "gene_synonym", + "GeneID:946710" + ], + [ + "gene_synonym", + "JW2201" + ], + [ + "gene_synonym", + "NP_416717.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06134" + ], + [ + "gene_synonym", + "ada" + ], + [ + "gene_synonym", + "b2213" + ] + ], + "dna_sequence": "ATGAAAAAAGCCACATGCTTAACTGACGATCAACGCTGGCAATCTGTCTTAGCCCGCGACCCGAATGCCGACGGCGAATTCGTTTTCGCCGTGCGTACCACAGGCATCTTTTGCCGTCCGTCTTGCCGCGCCAGACATGCTTTGCGGGAAAACGTCTCCTTCTACGCAAATGCCAGCGAGGCACTCGCCGCTGGCTTTCGCCCCTGCAAACGTTGTCAGCCAGAAAAAGCCAATGCCCAGCAACATCGGTTGGATAAAATCACCCACGCGTGTCGACTGCTGGAACAGGAAACGCCTGTAACGCTGGAAGCCTTAGCCGACCAGGTGGCGATGAGTCCATTTCATCTACATCGGTTGTTTAAAGCGACTACCGGAATGACGCCTAAAGCCTGGCAACAGGCCTGGCGCGCTCGCCGTTTGCGCGAATCGCTGGCGAAAGGGGAGAGCGTGACGACGTCTATTCTTAACGCCGGATTCCCCGACAGCAGCAGTTACTATCGCAAAGCTGACGAAACGCTGGGCATGACGGCTAAACAATTCCGTCACGGTGGCGAAAATCTGGCGGTGCGTTACGCGCTGGCTGATTGTGAGCTGGGTCGTTGCCTGGTGGCAGAAAGCGAGCGGGGGATTTGCGCGATATTGCTGGGCGATGATGACGCGACACTAATCAGCGAGTTGCAGCAGATGTTTCCCGCTGCCGACAACGCGCCTGCCGATCTGATGTTTCAGCAACATGTGCGTGAAGTGATCGCCAGCCTCAATCAACGCGATACGCCGCTGACGTTACCGCTGGACATTCGCGGCACTGCTTTTCAGCAACAAGTCTGGCAGGCACTGCGCACGATACCTTGCGGTGAAACCGTCAGTTATCAGCAACTGGCTAACGCCATCGGCAAACCGAAAGCGGTACGGGCCGTTGCCAGCGCCTGTGCCGCCAACAAGCTGGCTATCATAATACCCTGTCATCGGGTGGTCCGTGGTGATGGCACACTTTCCGGTTACCGCTGGGGCGTGTCGCGTAAAGCGCAACTGCTGCGCCGCGAAGCTGAAAATGAGGAGAGGTAA", + "dna_sequence_length": 1065, + "functions": [ + "fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase" + ], + "id": "CDS_2197", + "location": [ + [ + "NC_000913", + 2310405, + "-", + 1065 + ] + ], + "md5": "1947b3190aaba217f4e19cb6561c30cd", + "parent_gene": "", + "protein_md5": "adfc34e80d5f6c23a9d3323bef7b0bca", + "protein_translation": "MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRARHALRENVSFYANASEALAAGFRPCKRCQPEKANAQQHRLDKITHACRLLEQETPVTLEALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFPDSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCELGRCLVAESERGICAILLGDDDATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIIIPCHRVVRGDGTLSGYRWGVSRKAQLLRREAENEER", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007317" + ], + [ + "gene_synonym", + "ECK2206" + ], + [ + "gene_synonym", + "EcoGene:EG12073" + ], + [ + "gene_synonym", + "GI:16130151" + ], + [ + "gene_synonym", + "GeneID:946711" + ], + [ + "gene_synonym", + "JW5368" + ], + [ + "gene_synonym", + "NP_416718.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB85" + ], + [ + "gene_synonym", + "apbE" + ], + [ + "gene_synonym", + "b2214" + ], + [ + "gene_synonym", + "yojK" + ], + [ + "gene_synonym", + "yojL" + ] + ], + "dna_sequence": "ATGGAAATAAGCTTTACCCGCGTGGCACTGCTGGCTGCCGCGCTCTTCTTTGTTGGTTGCGATCAAAAACCACAACCCGCCAAAACCCACGCTACTGAAGTTACCGTTCTTGAAGGCAAAACTATGGGTACCTTCTGGCGTGCCAGCATCCCGGGCATTGACGCCAAACGCAGCGCCGAACTTAAAGAAAAGATTCAGACCCAACTGGACGCCGACGATCAGCTGCTTTCGACCTATAAAAAAGATTCCGCGCTGATGCGCTTTAACGACTCGCAAAGTTTATCGCCGTGGCCGGTAAGTGAAGCGATGGCCGATATCGTCACCACCTCGCTGCGCATTGGCGCGAAGACCGATGGCGCGATGGATATAACCGTCGGGCCGCTGGTGAATCTGTGGGGCTTTGGCCCGGAACAACAGCCGGTTCAAATTCCGAGCCAGGAACAGATCGATGCGATGAAAGCCAAAACCGGCTTACAGCACCTGACGGTCATCAATCAGTCGCATCAGCAATATCTGCAAAAAGACCTGCCGGATTTATATGTCGATCTCTCCACCGTCGGCGAAGGCTATGCGGCCGATCATTTGGCACGCTTGATGGAGCAGGAAGGGATTTCCCGCTATCTGGTGTCGGTGGGCGGCGCGCTGAACAGCCGTGGTATGAACGGTGAAGGCCTGCCGTGGCGGGTAGCGATTCAAAAACCAACCGATAAAGAAAACGCGGTTCAGGCTGTGGTGGATATCAACGGTCATGGGATTAGCACCTCTGGCAGCTACCGTAACTATTACGAACTGGACGGCAAACGTCTTTCCCATGTTATCGATCCGCAAACCGGGCGTCCCATCGAACACAATCTGGTATCCGTGACGGTGATTGCTCCGACGGCGCTGGAAGCCGATGCCTGGGATACTGGCTTGATGGTACTCGGGCCGGAGAAAGCTAAAGAGGTTGTTCGCCGGGAAGGGCTGGCGGTTTATATGATCACCAAAGAAGGCGATAGCTTTAAAACCTGGATGTCACCACAGTTTAAAAGCTTCCTTGTCAGCGAAAAAAATTAA", + "dna_sequence_length": 1056, + "functions": [ + "putative thiamine-synthetic flavin transferase lipoprotein" + ], + "id": "CDS_2198", + "location": [ + [ + "NC_000913", + 2311534, + "-", + 1056 + ] + ], + "md5": "db0bc1ff7994cd4c330406ec212572bd", + "parent_gene": "", + "protein_md5": "4650268831c5ca230e4a4e3f58ef3258", + "protein_translation": "MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGTFWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEAMADIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQHLTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSRGMNGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSFKTWMSPQFKSFLVSEKN", + "protein_translation_length": 351, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007321" + ], + [ + "gene_synonym", + "ECK2207" + ], + [ + "gene_synonym", + "EcoGene:EG10670" + ], + [ + "gene_synonym", + "GI:16130152" + ], + [ + "gene_synonym", + "GeneID:946716" + ], + [ + "gene_synonym", + "JW2203" + ], + [ + "gene_synonym", + "NP_416719.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06996" + ], + [ + "gene_synonym", + "b2215" + ], + [ + "gene_synonym", + "butR" + ], + [ + "gene_synonym", + "meoA" + ], + [ + "gene_synonym", + "ompC" + ], + [ + "gene_synonym", + "par" + ] + ], + "dna_sequence": "ATGAAAGTTAAAGTACTGTCCCTCCTGGTCCCAGCTCTGCTGGTAGCAGGCGCAGCAAACGCTGCTGAAGTTTACAACAAAGACGGCAACAAATTAGATCTGTACGGTAAAGTAGACGGCCTGCACTATTTCTCTGACAACAAAGATGTAGATGGCGACCAGACCTACATGCGTCTTGGCTTCAAAGGTGAAACTCAGGTTACTGACCAGCTGACCGGTTACGGCCAGTGGGAATATCAGATCCAGGGCAACAGCGCTGAAAACGAAAACAACTCCTGGACCCGTGTGGCATTCGCAGGTCTGAAATTCCAGGATGTGGGTTCTTTCGACTACGGTCGTAACTACGGCGTTGTTTATGACGTAACTTCCTGGACCGACGTACTGCCAGAATTCGGTGGTGACACCTACGGTTCTGACAACTTCATGCAGCAGCGTGGTAACGGCTTCGCGACCTACCGTAACACTGACTTCTTCGGTCTGGTTGACGGCCTGAACTTTGCTGTTCAGTACCAGGGTAAAAACGGCAACCCATCTGGTGAAGGCTTTACTAGTGGCGTAACTAACAACGGTCGTGACGCACTGCGTCAAAACGGCGACGGCGTCGGCGGTTCTATCACTTATGATTACGAAGGTTTCGGTATCGGTGGTGCGATCTCCAGCTCCAAACGTACTGATGCTCAGAACACCGCTGCTTACATCGGTAACGGCGACCGTGCTGAAACCTACACTGGTGGTCTGAAATACGACGCTAACAACATCTACCTGGCTGCTCAGTACACCCAGACCTACAACGCAACTCGCGTAGGTTCCCTGGGTTGGGCGAACAAAGCACAGAACTTCGAAGCTGTTGCTCAGTACCAGTTCGACTTCGGTCTGCGTCCGTCCCTGGCTTACCTGCAGTCTAAAGGTAAAAACCTGGGTCGTGGCTACGACGACGAAGATATCCTGAAATATGTTGATGTTGGTGCTACCTACTACTTCAACAAAAACATGTCCACCTACGTTGACTACAAAATCAACCTGCTGGACGACAACCAGTTCACTCGTGACGCTGGCATCAACACTGATAACATCGTAGCTCTGGGTCTGGTTTACCAGTTCTAA", + "dna_sequence_length": 1104, + "functions": [ + "outer membrane porin protein C" + ], + "id": "CDS_2199", + "location": [ + [ + "NC_000913", + 2312749, + "-", + 1104 + ] + ], + "md5": "67b0bcf21135b6de1d4a77d9f0652349", + "parent_gene": "", + "protein_md5": "b6ec19d9dd21f506c99af675868a1b58", + "protein_translation": "MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGEGFTSGVTNNGRDALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007330" + ], + [ + "gene_synonym", + "ECK2209" + ], + [ + "gene_synonym", + "EcoGene:EG12385" + ], + [ + "gene_synonym", + "GI:16130153" + ], + [ + "gene_synonym", + "GeneID:946717" + ], + [ + "gene_synonym", + "JW2204" + ], + [ + "gene_synonym", + "NP_416720.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39838" + ], + [ + "gene_synonym", + "b2216" + ], + [ + "gene_synonym", + "rcsD" + ], + [ + "gene_synonym", + "yojN" + ], + [ + "gene_synonym", + "yojP" + ], + [ + "gene_synonym", + "yojQ" + ] + ], + "dna_sequence": "ATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGTCGATAACTGGCGTTACGTGACCTGGCAGATCTACGACAACATTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTACTATCTGGAGAAACCACGCCGCAAAACGGAAGCGTTAATCTTTGGCTCTCACGACAACTCAACGCTTGAGATGACTCAGCGGATGTCCACTTATCTGGATACATTGTGGGGCGCAGAAAATGTACCGTGGTCGATGTATTACCTGAATGGTCAGGATAACAGTCTGGTGCTGATCTCAACCCTACCCCTTAAAGATCTCACCTCCGGATTTAAAGAATCGACCGTCAGCGACATTGTTGATTCACGTCGTGCAGAGATGTTGCAACAGGCCAACGCCCTCGATGAACGCGAAAGCTTTTCTAACATGCGCCGCCTGGCCTGGCAGAACGGTCATTACTTTACATTGCGTACTACCTTTAACCAGCCAGGACATCTGGCAACGGTCGTGGCTTTTGATCTGCCGATTAATGATTTGATCCCACCGGGTATGCCGCTGGACAGTTTCCGCCTTGAGCCAGACGCGACGGCAACGGGAAACAATGATAATGAGAAAGAAGGGACGGATAGCGTCAGTATCCACTTTAACAGTACGAAGATTGAAATCTCCTCGGCACTCAACTCTACCGATATGCGCCTGGTCTGGCAGGTTCCTTATGGCACCTTATTGCTGGATACGTTGCAAAACATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCGCATTTGAATCTGCAAAACATCACCACCATGGCGGAACAGCATCAGGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACAGTCCCTGGCGGAGAGCGCGGCTAAACTCAACGCCCCGGAAAGCAAACAACTGGCGAATCAGGCAGATGTGCTGGTGCGGCTGGTTGATGAAATACAGTTAGCGAACATGCTTGCGGATGATAGCTGGAAAAGTGAGACGGTGCTGTTCTCCGTGCAGGATTTAATTGATGAAGTTGTGCCTTCAGTGTTGCCTGCCATCAAGCGTAAAGGTCTGCAACTGCTGATTAACAATCATCTGAAAGCACACGATATGCGCCGCGGCGATCGCGATGCCTTACGACGTATTTTGCTGCTACTGATGCAATATGCCGTGACCTCAACGCAATTGGGAAAAATCACCCTTGAGGTTGATCAGGATGAGTCCTCCGAAGACCGCCTGACGTTCCGCATTCTGGACACGGGAGAAGGCGTAAGTATTCATGAAATGGATAATTTGCACTTCCCGTTTATCAACCAGACCCAAAACGATCGCTATGGCAAGGCGGACCCGCTGGCATTCTGGCTGAGCGATCAACTGGCACGTAAACTGGGCGGTCATTTAAACATCAAAACGCGGGATGGGCTTGGTACACGCTACTCTGTGCATATCAAAATGCTCGCAGCTGACCCGGAAGTTGAAGAGGAAGAAGAGCGTTTACTGGATGATGTCTGCGTAATGGTGGATGTTACTTCGGCAGAAATTCGGAATATTGTCACTCGCCAGTTAGAAAATTGGGGTGCAACCTGTATCACACCCGATGAAAGATTAATTAGTCAAGATTATGATATCTTTTTAACGGATAATCCGTCTAATCTTACTGCCTCTGGCTTGCTTTTAAGCGATGATGAGTCTGGCGTACGGGAAATTGGGCCTGGTCAATTGTGCGTCAACTTCAATATGAGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGCGGCTATTATGCGCTCTTTGTAGACACAGTACCGGATGATGTTAAGAGGCTGTATACTGAAGCAGCAACCAGTGACTTTGCTGCGTTAGCCCAAACGGCTCATCGTCTTAAAGGCGTATTTGCCATGCTAAATCTGGTACCCGGCAAGCAGTTATGTGAAACGCTGGAACATCTGATTCGTGAGAAGGATGTTCCAGGAATAGAAAAATACATCAGCGACATTGACAGTTATGTCAAGAGCTTGCTGTAG", + "dna_sequence_length": 2673, + "functions": [ + "phosphotransfer intermediate protein in two-component regulatory system with RcsBC" + ], + "id": "CDS_2200", + "location": [ + [ + "NC_000913", + 2313488, + "+", + 2673 + ] + ], + "md5": "a4297ef4ea7e2bf1734296e88dacfa04", + "parent_gene": "", + "protein_md5": "7d54a80c4bb771f434751937e4c0707e", + "protein_translation": "MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTENVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMIFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007333" + ], + [ + "gene_synonym", + "ECK2210" + ], + [ + "gene_synonym", + "EcoGene:EG10821" + ], + [ + "gene_synonym", + "GI:16130154" + ], + [ + "gene_synonym", + "GeneID:947441" + ], + [ + "gene_synonym", + "JW2205" + ], + [ + "gene_synonym", + "NP_416721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69407" + ], + [ + "gene_synonym", + "b2217" + ], + [ + "gene_synonym", + "rcsB" + ], + [ + "gene_synonym", + "viaA" + ] + ], + "dna_sequence": "ATGAACAATATGAACGTAATTATTGCCGATGACCATCCGATAGTCTTGTTCGGTATTCGCAAATCACTTGAGCAAATTGAGTGGGTGAATGTTGTCGGCGAATTTGAAGACTCTACAGCACTGATCAACAACCTGCCGAAACTGGATGCGCATGTGTTGATTACCGATCTCTCCATGCCTGGCGATAAGTACGGCGATGGCATTACCTTAATCAAGTACATCAAGCGCCATTTCCCAAGCCTGTCGATCATTGTTCTGACTATGAACAACAACCCGGCGATTCTTAGTGCGGTATTGGATCTGGATATCGAAGGGATCGTGCTGAAACAAGGTGCACCGACCGATCTGCCGAAAGCTCTCGCCGCGCTGCAGAAAGGGAAGAAATTTACCCCGGAAAGCGTTTCTCGCCTGTTGGAAAAAATCAGTGCTGGTGGTTACGGTGACAAGCGTCTCTCGCCAAAAGAGAGTGAAGTTCTGCGCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAA", + "dna_sequence_length": 651, + "functions": [ + "response regulator in two-component regulatory system with RcsC and YojN" + ], + "id": "CDS_2201", + "location": [ + [ + "NC_000913", + 2316177, + "+", + 651 + ] + ], + "md5": "6d02d2f75b6b3f3dee5cf962aaa143cc", + "parent_gene": "", + "protein_md5": "a4d0d02728a620eaca1f24bb25ab0c46", + "protein_translation": "MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007336" + ], + [ + "gene_synonym", + "ECK2211" + ], + [ + "gene_synonym", + "EcoGene:EG10822" + ], + [ + "gene_synonym", + "GI:145698285" + ], + [ + "gene_synonym", + "GeneID:948993" + ], + [ + "gene_synonym", + "JW5917" + ], + [ + "gene_synonym", + "JW5920" + ], + [ + "gene_synonym", + "NP_416722.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14376" + ], + [ + "gene_synonym", + "b2218" + ], + [ + "gene_synonym", + "rcsC" + ] + ], + "dna_sequence": "TTGAAATACCTTGCTTCTTTTCGTACAACCCTGAAAGCCTCGCGCTACATGTTCAGAGCATTGGCGTTAGTGCTCTGGCTGTTGATTGCTTTTTCATCCGTTTTTTACATCGTTAATGCGTTACATCAGCGAGAATCGGAAATTCGTCAGGAATTTAATCTGAGTTCCGATCAGGCTCAGCGCTTTATTCAACGCACCTCTGATGTGATGAAAGAGCTGAAGTACATCGCCGAAAATCGCTTATCGGCAGAAAACGGTGTGCTTTCCCCGCGTGGACGAGAAACGCAGGCGGATGTGCCTGCGTTTGAACCGCTGTTTGCCGACTCCGATTGTTCCGCAATGAGTAACACCTGGCGAGGTTCTCTGGAGTCATTGGCGTGGTTTATGCGCTACTGGCGCGATAATTTTTCTGCGGCTTACGATCTAAACCGGGTATTTTTAATCGGCAGCGATAACCTCTGCATGGCCAATTTCGGTCTGCGTGATATGCCAGTGGAACGCGATACCGCGTTGAAAGCTTTGCATGAACGCATCAATAAATATCGAAATGCACCACAAGATGATAGCGGCAGTAACCTCTACTGGATCAGCGAAGGTCCGCGCCCTGGCGTCGGGTATTTTTACGCGTTGACGCCAGTTTATCTGGCGAACCGGTTGCAGGCGCTTTTGGGTGTCGAGCAGACCATCCGGATGGAGAACTTTTTCTTACCGGGTACGTTGCCGATGGGGGTTACCATTCTTGATGAAAATGGTCATACCCTGATTTCGCTTACCGGACCAGAAAGTAAAATTAAGGGCGATCCTCGCTGGATGCAGGAACGCTCCTGGTTTGGCTATACGGAAGGGTTCCGGGAGCTGGTGCTGAAGAAAAATCTGCCACCCTCATCGCTAAGCATCGTGTATTCGGTGCCGGTTGATAAGGTGCTGGAACGCATTCGCATGTTGATCCTTAACGCAATTTTGCTGAATGTGCTTGCCGGAGCTGCATTGTTTACTCTCGCACGGATGTACGAGCGACGTATTTTCATTCCGGCGGAAAGCGACGCCCTGCGACTGGAAGAACATGAGCAGTTCAATCGCAAGATTGTCGCCTCCGCGCCAGTGGGTATCTGCATTTTGCGTACCGCTGATGGCGTCAATATTTTAAGTAACGAACTGGCGCATACCTATCTCAATATGCTTACGCATGAGGACCGCCAACGACTGACGCAAATTATCTGTGGGCAGCAGGTCAATTTTGTTGATGTCCTGACCAGCAACAATACCAATCTGCAAATCAGCTTCGTCCATTCGCGCTATCGTAATGAAAACGTGGCCATTTGTGTGCTGGTGGATGTTTCTTCGCGCGTGAAGATGGAAGAGTCGTTGCAGGAGATGGCACAAGCAGCGGAACAGGCGAGCCAGTCAAAATCGATGTTCCTTGCCACCGTCAGTCATGAGCTGCGAACGCCGCTGTATGGCATTATCGGTAACCTGGATCTGTTGCAAACCAAAGAGTTACCGAAAGGCGTCGATCGGCTGGTGACGGCAATGAACAACTCTTCCAGCCTGTTGTTGAAAATTATCAGCGATATTCTCGATTTCTCGAAGATTGAATCGGAACAGTTGAAGATCGAACCGCGTGAGTTTTCACCGCGTGAAGTGATGAACCACATCACCGCCAACTATTTACCGCTGGTGGTACGCAAGCAGTTAGGCTTGTACTGCTTTATTGAACCGGATGTGCCAGTGGCCTTAAATGGCGACCCGATGCGTTTACAGCAGGTCATCTCCAACCTGTTGAGTAACGCCATAAAATTCACCGATACCGGCTGTATAGTTTTGCATGTTCGCGCGGATGGCGATTATCTCTCTATCCGTGTTCGCGATACCGGCGTGGGGATACCGGCGAAAGAAGTGGTGCGCTTGTTTGATCCCTTCTTCCAGGTCGGAACGGGCGTACAGCGTAATTTCCAGGGGACCGGTCTGGGTCTGGCGATTTGTGAAAAACTGATCAGCATGATGGACGGCGATATCTCGGTAGATTCAGAACCGGGAATGGGCAGCCAGTTTACCGTGCGTATTCCGTTGTACGGCGCTCAGTACCCGCAGAAAAAAGGCGTGGAAGGGTTGAGTGGTAAACGCTGCTGGCTGGCGGTCCGCAATGCGTCGCTCTGTCAGTTCCTGGAAACCAGTTTGCAGCGCAGCGGCATCGTCGTTACAACATACGAAGGGCAGGAACCGACTCCCGAAGATGTGTTGATCACTGACGAGGTAGTGAGTAAAAAATGGCAGGGCAGAGCGGTAGTGACCTTCTGTCGTCGCCATATTGGTATTCCGCTGGAGAAAGCGCCAGGGGAGTGGGTACACAGTGTGGCTGCTCCGCATGAGCTACCGGCATTGTTGGCGCGTATTTATTTGATCGAGATGGAGAGCGACGATCCTGCTAACGCTCTGCCGTCAACGGACAAAGCGGTCAGCGATAATGACGATATGATGATTCTGGTCGTGGATGATCATCCGATTAACCGGCGTTTGCTGGCAGATCAGTTGGGATCGTTGGGCTATCAATGTAAAACCGCGAATGATGGCGTCGATGCGCTTAATGTACTTAGCAAGAATCATATTGATATCGTGCTTAGCGACGTCAACATGCCAAATATGGATGGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAG", + "dna_sequence_length": 2850, + "functions": [ + "hybrid sensory kinase in two-component regulatory system with RcsB and YojN" + ], + "id": "CDS_2202", + "location": [ + [ + "NC_000913", + 2319876, + "-", + 2850 + ] + ], + "md5": "63e558c55a81ad7d5f621a5b9d3d125f", + "parent_gene": "", + "protein_md5": "7584f03cbc119d36152683daee2b6b16", + "protein_translation": "MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAERVRKSRDS", + "protein_translation_length": 949, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007341" + ], + [ + "gene_synonym", + "ECK2212" + ], + [ + "gene_synonym", + "EcoGene:EG11667" + ], + [ + "gene_synonym", + "GI:16130156" + ], + [ + "gene_synonym", + "GeneID:949011" + ], + [ + "gene_synonym", + "JW2213" + ], + [ + "gene_synonym", + "NP_416723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q06067" + ], + [ + "gene_synonym", + "atoS" + ], + [ + "gene_synonym", + "b2219" + ] + ], + "dna_sequence": "ATGCATTATATGAAGTGGATTTATCCACGCCGCTTACGCAATCAAATGATCCTGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGATTATCATTGTGCTCACCGCTGGTTTGCTGATAAGCCTGCTGTTGATTGTCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGATGGCGTCATTGCCATTGACCGCCAGGGTGATGTAACCACCATGAACCCAGCAGCAGAAGTTATCACTGGCTATCAACGCCATGAACTGGTAGGGCAGCCTTACTCCATGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAACTGCCCGCAAAGAAACCCAGCGCCGCATGGCGCAAGCAGAACGCCTCGCCACACTGGGTGAGCTGATGGCTGGCGTCGCGCATGAAGTACGTAATCCGTTAACGGCTATTCGTGGTTATGTACAGATCTTGCGCCAACAAACCAGTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGA", + "dna_sequence_length": 1827, + "functions": [ + "sensory histidine kinase in two-component regulatory system with AtoC" + ], + "id": "CDS_2203", + "location": [ + [ + "NC_000913", + 2320043, + "+", + 1827 + ] + ], + "md5": "5ddaa3ae3809435db974c10522197f29", + "parent_gene": "", + "protein_md5": "0d1db145737dbbab38fa0857f2222708", + "protein_translation": "MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVLSEKEKKLSAVVNLLNQALGDRYDLYIDLPREERIRALNAELAPITENITHAFPGIGAGYYNKMLDAIITYAPSALYQNNVGVTIAADHPGREVMRTNTPLVYSGRQVRGDILNSMLPIERNGEILGYIWANELTEDIRRQAWKMDVRIIIVLTAGLLISLLLIVLFSRRLSANIDIITDGLSTLAQNIPTRLPQLPGEMGQISQSVNNLAQALRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDLTARKETQRRMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQLLEFSRPRHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRELLKQVLLNILINAVQAISARGKIRIQTWQYSDSQQAISIEDNGCGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPINPQGNQTV", + "protein_translation_length": 608, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007343" + ], + [ + "gene_synonym", + "Az" + ], + [ + "gene_synonym", + "ECK2213" + ], + [ + "gene_synonym", + "EcoGene:EG11668" + ], + [ + "gene_synonym", + "GI:16130157" + ], + [ + "gene_synonym", + "GeneID:947444" + ], + [ + "gene_synonym", + "JW2214" + ], + [ + "gene_synonym", + "NP_416724.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q06065" + ], + [ + "gene_synonym", + "atoC" + ], + [ + "gene_synonym", + "b2220" + ] + ], + "dna_sequence": "ATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATTGTGCGAACAACGGACGCACAGCATTACACCTGTTTGCCGATATTCACCCTGATGTGGTGTTGATGGATATCCGCATGCCAGAGATGGACGGCATCAAGGCACTAAAGGAGATGCGCAGCCATGAGACCCGGACACCCGTTATTCTGATGACGGCCTATGCGGAAGTGGAAACCGCCGTCGAAGCGCTACGCTGCGGAGCCTTCGACTATGTTATTAAACCGTTTGATCTCGATGAGTTGAATTTAATCGTTCAGCGCGCTTTACAACTCCAGTCAATGAAAAAAGAGATCCGTCATCTGCACCAGGCACTGAGCACCAGCTGGCAATGGGGGCACATTCTCACCAACAGCCCGGCGATGATGGACATCTGCAAAGACACCGCCAAAATTGCCCTTTCTCAGGCCAGCGTCTTGATTAGCGGTGAAAGCGGCACCGGGAAAGAGTTGATTGCCAGAGCGATTCACTACAATTCGCGGCGGGCAAAGGGGCCGTTCATTAAAGTCAACTGCGCGGCGCTGCCGGAATCGTTGCTCGAAAGTGAACTGTTTGGTCATGAAAAAGGTGCATTTACTGGTGCACAAACCTTGCGTCAGGGATTATTTGAACGAGCCAACGAAGGTACTCTGCTCCTCGACGAAATTGGCGAAATGCCGCTGGTACTACAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGACCATAAAAGTTGATATCCGCATCATTGCTGCCACCAACCGCGACTTGCAGGCAATGGTAAAAGAAGGCACCTTCCGTGAAGATCTCTTTTATCGCCTTAACGTTATTCATTTAATACTGCCGCCTCTGCGCGATCGCCGGGAAGATATTTCCCTGTTAGCTAATCACTTTTTGCAAAAATTCAGTAGTGAGAATCAGCGCGATATTATCGACATCGATCCGATGGCAATGTCACTGCTTACCGCCTGGTCATGGCCGGGAAATATTCGAGAGCTTTCCAACGTTATTGAACGCGCCGTCGTGATGAATTCAGGCCCGATCATTTTTTCTGAGGATCTTCCGCCACAGATTCGTCAGCCAGTCTGTAATGCTGGCGAGGTAAAAACAGCCCCTGTCGGTGAGCGTAATTTAAAAGAGGAAATTAAACGCGTCGAAAAACGCATCATTATGGAAGTGCTGGAACAACAAGAAGGAAACCGAACCCGCACTGCTTTAATGCTGGGCATCAGTCGCCGTGCATTGATGTATAAACTCCAGGAATACGGTATCGATCCGGCGGATGTATAA", + "dna_sequence_length": 1386, + "functions": [ + "fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein" + ], + "id": "CDS_2204", + "location": [ + [ + "NC_000913", + 2321866, + "+", + 1386 + ] + ], + "md5": "d1cc2b8a320956698c8c1a16399c3952", + "parent_gene": "", + "protein_md5": "01a1c8e9bf2bf553bb06f18e28c39619", + "protein_translation": "MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007347" + ], + [ + "gene_synonym", + "ECK2214" + ], + [ + "gene_synonym", + "EcoGene:EG11669" + ], + [ + "gene_synonym", + "GI:16130158" + ], + [ + "gene_synonym", + "GeneID:947525" + ], + [ + "gene_synonym", + "JW2215" + ], + [ + "gene_synonym", + "NP_416725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76458" + ], + [ + "gene_synonym", + "atoD" + ], + [ + "gene_synonym", + "b2221" + ] + ], + "dna_sequence": "ATGAAAACAAAATTGATGACATTACAAGACGCCACCGGCTTCTTTCGTGACGGCATGACCATCATGGTGGGCGGATTTATGGGGATTGGCACTCCATCCCGCCTGGTTGAAGCATTACTGGAATCTGGTGTTCGCGACCTGACATTGATAGCCAATGATACCGCGTTTGTTGATACCGGCATCGGTCCGCTCATCGTCAATGGTCGAGTCCGCAAAGTGATTGCTTCACATATCGGCACCAACCCGGAAACAGGTCGGCGCATGATATCTGGTGAGATGGACGTCGTTCTGGTGCCGCAAGGTACGCTAATCGAGCAAATTCGCTGTGGTGGAGCTGGACTTGGTGGTTTTCTCACCCCAACGGGTGTCGGCACCGTCGTAGAGGAAGGCAAACAGACACTGACACTCGACGGTAAAACCTGGCTGCTCGAACGCCCACTGCGCGCCGACCTGGCGCTAATTCGCGCTCATCGTTGCGACACACTTGGCAACCTGACCTATCAACTTAGCGCCCGCAACTTTAACCCCCTGATAGCCCTTGCGGCTGATATCACGCTGGTAGAGCCAGATGAACTGGTCGAAACCGGCGAGCTGCAACCTGACCATATTGTCACCCCTGGTGCCGTTATCGACCACATCATCGTTTCACAGGAGAGCAAATAA", + "dna_sequence_length": 663, + "functions": [ + "acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit" + ], + "id": "CDS_2205", + "location": [ + [ + "NC_000913", + 2323447, + "+", + 663 + ] + ], + "md5": "087a07ad020517693a821f8d654d39cd", + "parent_gene": "", + "protein_md5": "d01941948f66f5161fac7a8827d20ba1", + "protein_translation": "MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQESK", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007349" + ], + [ + "gene_synonym", + "ECK2215" + ], + [ + "gene_synonym", + "EcoGene:EG11670" + ], + [ + "gene_synonym", + "GI:16130159" + ], + [ + "gene_synonym", + "GeneID:946719" + ], + [ + "gene_synonym", + "JW2216" + ], + [ + "gene_synonym", + "NP_416726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76459" + ], + [ + "gene_synonym", + "atoA" + ], + [ + "gene_synonym", + "b2222" + ] + ], + "dna_sequence": "ATGGATGCGAAACAACGTATTGCGCGCCGTGTGGCGCAAGAGCTTCGTGATGGTGACATCGTTAACTTAGGGATCGGTTTACCCACAATGGTCGCCAATTATTTACCGGAGGGTATTCATATCACTCTGCAATCGGAAAACGGCTTCCTCGGTTTAGGCCCGGTCACGACAGCGCATCCAGATCTGGTGAACGCTGGCGGGCAACCGTGCGGTGTTTTACCCGGTGCAGCCATGTTTGATAGCGCCATGTCATTTGCGCTAATCCGTGGCGGTCATATTGATGCCTGCGTGCTCGGCGGTTTGCAAGTAGACGAAGAAGCAAACCTCGCGAACTGGGTAGTGCCTGGGAAAATGGTGCCCGGTATGGGTGGCGCGATGGATCTGGTGACCGGGTCGCGCAAAGTGATCATCGCCATGGAACATTGCGCCAAAGATGGTTCAGCAAAAATTTTGCGCCGCTGCACCATGCCACTCACTGCGCAACATGCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGATCTGAATACGCAACGGGGTGATTTATGA", + "dna_sequence_length": 651, + "functions": [ + "acetyl-CoA:acetoacetyl-CoA transferase, beta subunit" + ], + "id": "CDS_2206", + "location": [ + [ + "NC_000913", + 2324109, + "+", + 651 + ] + ], + "md5": "70ef7d12a437d0adf83d214cdeff2031", + "parent_gene": "", + "protein_md5": "7ab5c96ce88776428c8b6e0085c2e8f8", + "protein_translation": "MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQSENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTAQHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007353" + ], + [ + "gene_synonym", + "ECK2216" + ], + [ + "gene_synonym", + "EcoGene:EG11671" + ], + [ + "gene_synonym", + "GI:16130160" + ], + [ + "gene_synonym", + "GeneID:946721" + ], + [ + "gene_synonym", + "JW2217" + ], + [ + "gene_synonym", + "NP_416727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76460" + ], + [ + "gene_synonym", + "atoE" + ], + [ + "gene_synonym", + "b2223" + ] + ], + "dna_sequence": "ATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGATCGCGCTTTGGTTAACACCACAAACGCCGATCAGCATGGTGAAAATGTGGGGTGACGGTTTCTGGAACTTGCTGGCGTTTGGTATGCAGATGGCGCTTATCATCGTTACCGGTCATGCCCTTGCCAGCTCTGCTCCGGTGAAAAGTTTGCTGCGTACTGCCGCCTCCGCCGCAAAGACGCCCGTACAGGGCGTCATGCTGGTCACTTTCTTCGGTTCAGTCGCTTGTGTCATCAACTGGGGATTTGGTTTGGTTGTCGGCGCAATGTTTGCCCGTGAAGTCGCCCGGCGAGTCCCCGGTTCTGATTATCCGTTGCTCATTGCCTGCGCCTACATTGGTTTTCTCACCTGGGGTGGCGGCTTCTCTGGATCAATGCCTCTGTTGGCTGCAACACCGGGCAACCCGGTTGAGCATATCGCCGGGCTGATCCCGGTGGGCGATACTCTGTTCAGTGGTTTTAACATTTTCATCACTGTGGCGTTGATTGTGGTGATGCCATTTATCACCCGCATGATGATGCCAAAACCGTCTGACGTGGTGAGTATCGATCCAAAACTACTCATGGAAGAGGCTGATTTTCAAAAGCAGCTACCGAAAGATGCCCCACCATCCGAGCGACTGGAAGAAAGCCGCATTCTGACGTTGATCATCGGCGCACTCGGTATCGCTTACCTTGCGATGTACTTCAGCGAACATGGCTTCAACATCACCATCAATACCGTCAACCTGATGTTTATGATTGCGGGTCTGCTGCTACATAAAACGCCAATGGCTTATATGCGTGCTATCAGCGCGGCAGCACGCAGTACTGCCGGTATTCTGGTGCAATTCCCCTTCTACGCTGGGATCCAACTGATGATGGAGCATTCCGGTCTGGGCGGACTCATTACCGAATTCTTCATCAATGTTGCGAACAAAGACACCTTCCCGGTAATGACCTTTTTTAGTTCTGCACTGATTAACTTCGCCGTTCCGTCTGGCGGCGGTCACTGGGTTATTCAGGGACCTTTCGTGATACCCGCAGCCCAGGCGCTGGGCGCTGATCTCGGTAAATCGGTAATGGCGATCGCCTACGGCGAGCAATGGATGAACATGGCACAACCATTCTGGGCGCTGCCAGCACTGGCAATCGCCGGACTCGGTGTCCGCGACATCATGGGCTACTGCATCACTGCCCTGCTCTTCTCCGGTGTCATTTTCGTCATTGGTTTAACGCTGTTCTGA", + "dna_sequence_length": 1323, + "functions": [ + "short chain fatty acid transporter" + ], + "id": "CDS_2207", + "location": [ + [ + "NC_000913", + 2324756, + "+", + 1323 + ] + ], + "md5": "282a36dc6c879ca9c0cd544f3128aa14", + "parent_gene": "", + "protein_md5": "01846cf6b1c4d6c0fcc60600392ffdd4", + "protein_translation": "MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007355" + ], + [ + "gene_synonym", + "ECK2217" + ], + [ + "gene_synonym", + "EcoGene:EG11672" + ], + [ + "gene_synonym", + "GI:16130161" + ], + [ + "gene_synonym", + "GeneID:946727" + ], + [ + "gene_synonym", + "JW2218" + ], + [ + "gene_synonym", + "NP_416728.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76461" + ], + [ + "gene_synonym", + "atoB" + ], + [ + "gene_synonym", + "b2224" + ] + ], + "dna_sequence": "ATGAAAAATTGTGTCATCGTCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCCGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAA", + "dna_sequence_length": 1185, + "functions": [ + "acetyl-CoA acetyltransferase" + ], + "id": "CDS_2208", + "location": [ + [ + "NC_000913", + 2326109, + "+", + 1185 + ] + ], + "md5": "10c4e7a17ac95e8007a92d3e5a04bece", + "parent_gene": "", + "protein_md5": "d467ffd301c62043001b9b93b7fa61f8", + "protein_translation": "MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007357" + ], + [ + "gene_synonym", + "ECK2218" + ], + [ + "gene_synonym", + "EcoGene:EG14078" + ], + [ + "gene_synonym", + "GI:16130162" + ], + [ + "gene_synonym", + "GeneID:946728" + ], + [ + "gene_synonym", + "JW2219" + ], + [ + "gene_synonym", + "NP_416729.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76462" + ], + [ + "gene_synonym", + "b2225" + ], + [ + "gene_synonym", + "yfaP" + ] + ], + "dna_sequence": "ATGCGAAAGATTTTTCTTCCGTTGTTACTGGTGGCGCTTTCGCCTGTCGCTCACAGTGAAGGTGTGCAGGAAGTCGAGATTGATGCACCGCTCTCAGGCTGGCATCCGGCAGAGGGCGAAGATGCCAGTTTTTCACAATCGATCAATTACCCGGCGTCGTCCGTCAACATGGCAGATGATCAAAATATCTCAGCGCAGATCCGCGGCAAAATAAAGAATTATGCTGCGGCGGGTAAAGTTCAGCAGGGCCGGCTGGTGGTCAACGGTGCCAGTATGCCGCAGAGAATTGAATCCGATGGTTCATTTGCACGCCCTTATATTTTCACTGAAGGCAGCAACAGCGTGCAGGTCATCAGCCCGGATGGGCAAAGCCGACAAAAAATGCAGTTTTACTCAACGCCGGGTACAGGAACGATTCGTGCACGTTTACGGCTGGTTCTCTCGTGGGATACGGACAATACCGACCTCGACCTTCACGTTGTTACGCCCGATGGCGAACACGCCTGGTACGGTAACACCGTGCTGAAAAACAGTGGTGCACTGGATATGGATGTCACGACGGGGTACGGACCCGAGATTTTCGCCATGCCCGCGCCAATTCACGGGCGCTATCAGGTGTATATCAACTACTATGGTGGGCGCAGCGAAACGGAATTAACCACCGCCCAACTGACGCTGATCACCGATGAAGGATCGGTCAATGAGAAACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGA", + "dna_sequence_length": 777, + "functions": [ + "DUF2135 family protein, putative host defense protein" + ], + "id": "CDS_2209", + "location": [ + [ + "NC_000913", + 2328143, + "-", + 777 + ] + ], + "md5": "fc8eb515b77990d9e4b83f85cbec27e7", + "parent_gene": "", + "protein_md5": "8052f4b1a1591eb979f9030fc61c1eff", + "protein_translation": "MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007359" + ], + [ + "gene_synonym", + "ECK2219" + ], + [ + "gene_synonym", + "EcoGene:EG14079" + ], + [ + "gene_synonym", + "GI:16130163" + ], + [ + "gene_synonym", + "GeneID:946730" + ], + [ + "gene_synonym", + "JW2220" + ], + [ + "gene_synonym", + "NP_416730.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76463" + ], + [ + "gene_synonym", + "b2226" + ], + [ + "gene_synonym", + "yfaQ" + ] + ], + "dna_sequence": "GTGAACTGGCGCAGAATCGTCTGGCTATTGGCGTTGGTTACTCTGCCAACACTTGCGGAGGAGACGCCGTTACAACTGGTGCTGCGCGGTGCGCAGCACGATCAACTGTATCAGCTGTCGTCATCAGGCGTGACCAAAGTCTCAGCATTACCTGACTCGCTCACCACGCCGTTAGGGAGTTTGTGGAAACTGTATGTTTACGCCTGGCTGGAGGATACCCATCAACCGGAGCAGCCCTACCAGTGTCGCGGAAACTCCCCGGAAGAGGTTTATTGTTGTCAGGCTGGGGAGAGCATAACGCGCGATACCGCGCTGGTACGTTCCTGTGGGCTCTATTTTGCGCCGCAGCGGTTGCATATTGGCGCAGATGTGTGGGGGCAATACTGGCAACAGCGTCAGGCACCTGCGTGGTTAGCGTCTCTGACTACGCTGAAGCCAGAAACCTCGGTAACGGTTAAATCGCTGCTTGATTCATTAGCGACGTTACCCGCGCAAAACAAAGCTCAGGAAGTCTTACTGGATGTGGTGCTGGACGAGGCGAAAATCGGTGTCGCATCCATGCTCGGTAGTCGGGTACGGGTGAAAACCTGGAGCTGGTTTGCCGATGATAAACAGGAAATCCGTCAGGGTGGTTTTGCTGGCTGGTTAACCGATGGTACACCGCTGTGGGTTACTGGCAGTGGCACCAGCAAAACGGTACTAACCCGTTATGCGACGGTGCTTAATCGGGTTTTGCCAGTGCCGACGCAGGTTGCCAGTGGGCAATGTGTAGAGGTGGAGCTGTTTGCCCGCTATCCGCTGAAGAAAATCACAGCGGAAAAGAGTACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTACGTTTGTCAGCCACGGTGAGACGACCTTACTGAGCGAAAAGGGCAAACTGAAATTGCAGTCGCATCTCGATCGTGAAGAGTACGTTGCCAGAGTTCTGGATCGCGAGGCGAAAAGTACGCCCCCTGAGGCAGCGAAAGCCATGACCGTGGCGATTCGCACTTTTTTACAGCAAAACGCCAATCGGGAAGGCGATTGCCTGACCATCCCCGACAGCAGCGCCACGCAGCGTGTTTCTGCTTCGCCAGCGACCACGGGGGCGCGAACGATGACCGCCTGGACGCAGGATCTCATCTATGCAGGCGATCCGGTTCATTATCATGGCAGTCGCGCTACCGAAGGGACACTTTCCTGGCGGCAAGCCACGGCCCAGGCGGGGCAGGGAGAGCGTTACGATCAGATACTCGCGTTTGCTTATCCCGACAACAGTCTTAGCCGCTGGGGAGCGCCACGCTCAACCTGCCAGTTATTACCCAAAGCGAAAGCCTGGCTGGCGAAAAAAATGCCGCAGTGGCGGCGTATATTACAAGCTGAGACGGGGTACAACGAACCAGACGTGTTTGCGGTTTGCCGTTTAGTCTCAGGTTTCCCCTATACCGATCGGCAGCAGAAACGGCTGTTTATTCGTAACTTCTTTACGCTTCAGGATCGGCTGGATTTAACCCATGAGTATCTGCACCTGGCCTTTGATGGTTATCCCACCGGGCTTGATGAGAACTATATCGAAACGCTGACCCGACAATTATTAATGGACTAA", + "dna_sequence_length": 1650, + "functions": [ + "tandem DUF2300 domain protein, putative host defense protein" + ], + "id": "CDS_2210", + "location": [ + [ + "NC_000913", + 2329797, + "-", + 1650 + ] + ], + "md5": "5e0d1e75981c2858821e565447f79355", + "parent_gene": "", + "protein_md5": "18980ff896a04c5d9250fbdaee119774", + "protein_translation": "MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD", + "protein_translation_length": 549, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007362" + ], + [ + "gene_synonym", + "ASAP:ABE-0007364" + ], + [ + "gene_synonym", + "ASAP:ABE-0285101" + ], + [ + "gene_synonym", + "ECK2220" + ], + [ + "gene_synonym", + "EcoGene:EG14081" + ], + [ + "gene_synonym", + "GeneID:1450231" + ], + [ + "gene_synonym", + "JW2221" + ], + [ + "gene_synonym", + "JW2222" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76464" + ], + [ + "gene_synonym", + "b4500" + ], + [ + "gene_synonym", + "yfaR" + ], + [ + "gene_synonym", + "yfaS" + ] + ], + "dna_sequence": "ATGGATACCCAACGATTCCAATCCCAATTTCATTGGCATTTATCGTTTAAATTTTCTGGCGCGATAGCAGCGTGCTTGTCCCTGTCTCTTGTGGGAACAGGGCTTGCTAATGCTGATGATTCGCTTCCTTCCAGCAACTATGCGCCGCCTGCCGGGGGAACATTCTTTTTGCTTGCTGACAGCAGTTTTAGCAGCAGTGAAGAGGCGAAAGTGCGACTGGAAGCGCCGGGGCGTGATTATCGGCGCTATCAGATGGAAGAGTACGGCGGCGTGGACGTTCGCCTGTATCGTATTCCTGACCCGATGGCATTTTTGCGCCAGCAGAAAAACCTGCATCGCATTGTGGTGCAACCGCAATATCTGGGCGACGGGCTGAACAATACGCTAACCTGGCTGTGGGATAACTGGTACGGCAAATCTCGCCGCGTGATGCAGCGTACTTTCTCTTCTCAGTCACGGCAGAATGTGACTCAGGCGTTACCCGAATTACAGCTCGGCAATGCCATTATTAAACCTTCCCGTTATGTACAGAACAACCAGTTTTCCCCGCTGAAAAAATATCCCCTGGTGAAACAGTTCCGTTATCCACTATGGCAGGCTAAACCGTTCGAGCCGCAGCAAGGGGTAAAACTGGAAGGCGCATCCAGCAATTTCATCTCGCCGCAGCCGGGTAACATTTATATTCCTCTCGGCCAACAAGAGCCGGGACTGTACCTCGTCGAGGCGATGGTTGGTGGGTATCGGGCGACGACGGTGGTGTTTGTTTCCGATACCGTGGCGCTTAGCAAAGTGTCAGGCAAAGAGCTTCTGGTGTGGACCGCGGGTAAAAAACAGGGTGAAGCGAAGCCCGGCTCAGAGATCTTGTGGACTGACGGTCTTGGCGTGATGACCCGCGGTGTGACCGATGACAGCGGTACCTTGCAGTTACAACATATATCGCCAGAACGTTCATACATTCTGGGTAAGGATGCTGAAGGCGGCGTTTTTGTCTCCGAGAACTTCTTCTACGAAAGCGAAATCTACAACACCCGCTTGTATATTTTTACCGATCGCCCGCTATATCGCGCAGGCGATCGTGTCGATGTTAAAGTGATCGGCCGCGAGTTCCACGATCCGTTGCATTCATCCCCCATCGTCAGCGCCCCGGCGAAGCTTTCGGTGCTGGACGCCAACGGCAGTCTGTTGCAAACCGTCAATGTCACGCTGGATGCGCGCAATGGCGGGCAGGGAAGTTTCCGCCTGCCAGAAAATGCCGTAGCCGGAGGTTATGAGTTACGTCTTGCTTACCGCAATCAGGTCTATAGCAGCAGTTTTCGCGTGGCAAACTACATCAAGCCACATTTCGAGATTGGTTTAGCTCTCGCCAAAAAAGAGTTCAAAACTGGCGAAGCGGTCAGCGGCAAACTGCAACTGCTCTACCCGGATGGCGAGCCGGTAAAAAATGCCCGCGTGCAGTTAAGTTTGCGCGCTCAGCAATTATCAATGGTCGGTAACGATTTGCGTTATGCCGGACGTTTCCCCGTGTCGCTGGAAGGCAGCGAAACGGTGTCCGACGCCAGCGGTCATGTGGCGTTAAATCTCCCCGCCGCCGATAAACCGAGCCGCTATTTGTTAACCGTCTCCGCCAGTGACGGCGCGGCGTATCGCGTCACCACCACCAAAGAGATCCTCATTGAACGCGGTCTGGCGCATTACTCATTAAGTACTGCCGCACAATACAGTAATAGCGGCGAGTCGGTTGTGTTCCGTTATGCCGCGCTGGAATCTTCAAAACAGGTTCCTGTTACGTATGAATGGTTGCGTCTCGAAGACCGCACGAGCCATAGCGGAGAGCTACCGTCAGGCGGCAAATCCTTTACCGTCAATTTCGCTAAACCTGGCAACTACAATCTGACATTACGCGATAAAGACGGCTTAATTCTCGCTGGGTTAAGTCATGCCGTCAGCGGTAAGGGCAGCACGGCGCATACTGGTACGGTAGATATCGTGGCGGATAAAACGCTGTACCAGCCAGGCGAAACCGCGAAGATGCTGATTACCTTTCCGGAGCCAATTGATGAAGCATTATTGACGCTGGAACGCGATCGCGTGGAACAGCAGTCGCTGCTTTCGCATCCGGCAAACTGGCTAACGCTACAACGTTTAAACGATACCCAGTATGAAGCCCGGGTTCCAGTGAGCAATTCCTTTGCGCCTAACATCACTTTTTCGGTGCTGTATACCCGTAACGGTCAGTACAGTTTTCAGAACGCCGGGATCAAAGTTGCCGTTCCCCAGCTGGATATCCGGGTGAAAACGGACAAAACCCATTACCAGCCTGGTGAACTGGTCAATGTCGAATTAACCTCGTCGCTGAAAGGTAAACCTGTTTCTGCGCAGCTAACGGTAGGCGTGGTCGATGAAATGATCTACGCGCTGCAACCAGAAATCGCGCCGAATATCGGCAAATTTTTCTATCCGCTGGGGCGTAACAATGTGCGTACCAGCTCCAGTCTGTCGTTTATCAGCTACGACCAGGCGCTCTCCAGCGAGCCGGTTGCGCCTGGCGCAACTAACCGCAGCGAGCGGCGAGTAAAAATGCTTGAACGTCCACGGCGTGAAGAGGTGGATACCGCGGCATGGATGCCGTCACTCACAACCGATAAACAAGGCAAAGCGTATTTCACGTTCCTGATGCCTGATTCGTTAACCCGCTGGCGTATCACCGCGCGTGGGATGAACGGCGACGGGCTGGTCGGGCAGGGGCGTGCTTATCTGCGTTCGGAAAAAAATCTCTACATGAAGTGGAGTATGCCAACGGTGTATCGCGTGGGCGACAAACCGGCGGCAGGACTGTTTATCTTCAGTCAGCAGGATAACGAACCGGTGGCGCTGGTGACTAAATTTGCAGGCGCTGAGATGCGCCAGACGCTGACGCTGCACAAAGGGGCGAATTATATTTCGCTGACGCAGAATATTCAGCAATCTGGCTTGTTAAGTGCAGAACTGCAACAAAATGGGCAAGTGCAGGACAGCATTAGCACAAAACTGTCTTTTGTGGATAACAGCTGGCCCGTTGAACAGCAGAAAAATGTCATGCTCGGTGGTGGCGATAACGCGCTGATGTTGCCCGAGCAGGCGAGCAATATCCGGCTACAAAGTAGTGAAACGCCGCAGGAGATTTTCCGCAACAATCTTGATGCGTTAGTCGATGAACCGTGGGGTGGCGTAATCAACACCGGTAGCCGTCTGATCCCGCTCAGTCTCGCCTGGCGTTCGCTTGCCGATCATCAAAGTGCCGCCGCTAACGACATTCGTCAGATGATTCAGGATAACCGTCTGCGGCTGATGCAACTGGCGGGGCCCGGAGCGCGCTTTACCTGGTGGGGTGAAGATGGCAATGGTGACGCCTTCCTTACGGCATGGGCATGGTACGCCGACTGGCAGGCCAGCCAGGCGATCGGCGTAACGCAACAACCGGAATACTGGCAGCATATGCTCGACAGCTACGCGGAGCAGGCAGATAACATGCCGTTATTGCATCGGGCGCTGGTGCTGGCATGGGCGCAGGAGATGAATTTGCCGTGCAAAACGTTGTTGAAAGGGTTGGATGAAGCTATCGCCCGGCGCGGAACTAAAACTGAAGATTTCTCTGAGGAAGACACCCGCGATATCAATGATAGCCTGATCCTCGATACACCGGAGTCTCCACTGGCAGATGCGGTGGCAAACGTCTTAACCATGACGTTGCTGAAAAAAGCGCAGTTGAAGTCCACGGTGATGCCACAGGTTCAGCAATATGCGTGGGATAAAGCGGCAAACAGCAATCAGCCGCTGGCGCACACGGTTGTGCTGCTTAATAGCGGTGGCGACGCTACCCAGACGGCCGCTATTTTAAGTGGTTTGACCGCTGAGCAATCCACTATTGAGCGCGCGCTGGCCATGAACTGGCTGGCGAAATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGGGGCGAAGACTGGCGTTGGGTTGGTCAGGGCGTGCCGGACATTCTCTCTTTTGGTGACGAATTATCGCCGCAAAATGTGCAGGTCCGCTGACGTGAGCCGGCAAAAATGGCTCAACAAAGTAACATTCCGGTGACCGTTGAACGCCAGTTGTATCGGCTTATCCCTGGTGAAGAAGAGATGAGCTTTATTCTGCAACCGGTGACCAGCAATGAGATTGACAGCGATGCGCTGTATCTCGATGAAATCACGCTTACCAGCGAGCAGGATGCAGTTCTGCGCTACGGTCAGGTGGAAGTACCGCTGCCACCGGGAGCCGACGTTGAGCGCACAACATGGGGCATTTCGGTCAATAAACCCAACGCCGCGAAACAGCAGGGGCAATTGCTGGAAAAAGCGCGAAATGAAATGGGCGAACTGGCCTATATGGTGCCGGTGAAAGAACTGACGGGAACGGTCACTTTCCGCCATTTGCTGCGCTTCTCGCAAAAAGGGCAATTCGTTCTGCCTCCTGCTCGTTATGTGCGTTCCTATGCACCTGCGCAGCAAAGTGTTGCGGCAGGGAGTGAATGGACCGGGATGCAGGTGAAATAA", + "dna_sequence_length": 4605, + "id": "CDS_2211", + "location": [ + [ + "NC_000913", + 2334402, + "-", + 4605 + ] + ], + "md5": "461d30bf497c76a3331d5fd3c5390b86", + "parent_gene": "", + "protein_md5": "73226aa0fba0abbbb662e0516c558aa3", + "protein_translation": "MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVR", + "protein_translation_length": 1367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007366" + ], + [ + "gene_synonym", + "ECK2221" + ], + [ + "gene_synonym", + "EcoGene:EG14082" + ], + [ + "gene_synonym", + "GI:90111404" + ], + [ + "gene_synonym", + "GeneID:946622" + ], + [ + "gene_synonym", + "JW2223" + ], + [ + "gene_synonym", + "NP_416732.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76466" + ], + [ + "gene_synonym", + "b2229" + ], + [ + "gene_synonym", + "yfaT" + ] + ], + "dna_sequence": "ATGAGGCACGGGCTGCTGGCGCTGATTTGCTGGCTGTGTTGTGTTGTTGCCCATAGCGAAATGCTGAATGTCGAACAATCCGGGCTGTTTCGCGCCTGGTTTGTACGCATTGCACAAGAACAGCTCCGCCAGGGGCCAAGTCCACGCTGGTATCAGCAGGATTGTGCGGGCCTGGTGCGATTTGCGGCGAACGAGACGCTGAAAGTTCACGACAGTAAATGGCTAAAAAGTAACGGTTTATCTAGCCAGTATTTGCCGCCAGAGATGACGCTAACACCTGAACAGCGTCAACTGGCGCAAAACTGGAATCAGGGGAACGGGAAAACCGGCCCCTATGTGACCGCGATTAATTTGATTCAGTACAACAGCCAGTTTATTGGCCAGGACATAAACCAGGCGCTGCCTGGCGATATGATTTTTTTCGATCAGGGCGATGCCCAGCACTTAATGGTCTGGATGGGGCGTTACGTCATCTACCACACCGGAAGCGCCACGAAAACTGACAACGGAATGCGCGCAGTCAGTCTGCAACAACTTATGACATGGAAGGACACCCGATGGATACCCAACGATTCCAATCCCAATTTCATTGGCATTTATCGTTTAAATTTTCTGGCGCGATAG", + "dna_sequence_length": 624, + "functions": [ + "DUF1175 family protein, putative host defense protein" + ], + "id": "CDS_2212", + "location": [ + [ + "NC_000913", + 2334959, + "-", + 624 + ] + ], + "md5": "60e9d8da47e7f057a6d1c7bf359f53e4", + "parent_gene": "", + "protein_md5": "241a0895d7c02ebc1fc4df3418db684b", + "protein_translation": "MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007368" + ], + [ + "gene_synonym", + "ECK2222" + ], + [ + "gene_synonym", + "EcoGene:EG11142" + ], + [ + "gene_synonym", + "GI:90111405" + ], + [ + "gene_synonym", + "GeneID:946618" + ], + [ + "gene_synonym", + "JW2224" + ], + [ + "gene_synonym", + "NP_416733.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17994" + ], + [ + "gene_synonym", + "b2230" + ], + [ + "gene_synonym", + "pufY" + ], + [ + "gene_synonym", + "yfaA" + ] + ], + "dna_sequence": "ATGAGTGGTGAAAAAAAGGCGAAAGGCTGGCGGTTCTATGGTCTTGTAGGTTTTGGCGCAATAGCACTGCTTTCCGCTGGCGTCTGGGCGTTGCAATATGCTGGCAGTGGGCCAGAAAAAACGTTGTCGCCGCTGGTGGTGCACAACAATCTGCAAATCGATCTCAATGAGCCGGACCTCTTTCTCGACAGCGACTCTCTGAGCCAGCTTCCCAAAGATCTCCTCACCATTCCGTTTCTCCACGATGTTCTGAGCGAAGATTTCGTTTTCTATTATCAGAATCATGCCGATCGTCTGGGCATTGAAGGCAGCATTCGTCGTATTGTCTATGAACACGATCTCACGCTGAAAGATAAGCTCTTTTCGTCACTCTTAGATCAGCCCGCGCAGGCAGCGCTGTGGCACGATAAACAAGGCCATCTTTCACATTATATGGTGCTGATCCAGCGCAGTGGTTTAAGCAAACTGCTGGAGCCATTGTTGTTTGCCGCTACCAGCGACAGCCAGTTAAGCAAAACGGAAATCAGTAGCATCAAGATAAATAGTGAAACTGTTCCTGTTTATCAGTTGCGCTATAACGGCAATAACGCCCTGATGTTCGCGACTTATCAGGACAAGATGCTGGTGTTTTCCAGCACGGATATGTTGTTTAAAGATGATCAGCAGGATACCGAAGCCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCTTCTTTTGCTGGCGTACGCTTCGAAATGGGTAACGACGGCTGGCACAGTTTTGTGGCGTTAAATGATGAATCCGCCAGCGTAGATGCCAGTTTCGATTTTACGCCGGTATGGAACAGTATGCCTGCCGGAGCCAGCTTCTGTGTGGCGGTGCCGTATTCACACGGTATTGCCGAAGAGATGCTTTCGCACATCAGCCAGGAAAACGACAAGCTGAATGGGGCGTTAGACGGTGCCGCGGGGCTGTGCTGGTATGAAGACTCAAAATTGCAAACCCCGCTGTTTGTCGGTCAGTTTGATGGCACTGCCGAACAGGCGCAATTGCCAGGGAAACTGTTTACGCAAAATATTGGTGCGCACGAAAGCAAAGCGCCAGAAGGTGTTTTGCCGGTAAGCCAGACTCAGCAGGGCGAAGCGCAAATCTGGCGTCGCGAAGTGAGTTCCCGATACGGCCAGTATCCGAAAGCGCAGGCGGCGCAACCCGATCAATTAATGTCGGATTATTTTTTCCGTGTGTCGCTGGCGATGCAAAACAAAACGCTGCTTTTCTCCCTCGATGACACGCTGGTTAATAACGCGCTGCAAACACTGAATAAAACCCGCCCGGCAATGGTGGATGTAATACCCACTGATGGCATCGTTCCGCTCTATATCAATCCACAAGGAATAGCGAAACTGCTGCGTAACGAAACGTTGACCAGTCTGCCGAAGAATCTCGAACCGGTTTTTTATAACGCCGCACAAACTTTATTAATGCCGAAGCTGGACGCTTTATCTCAACAACCGCGTTATGTCATGAAGCTGGCCCAGATGGAACCCGGTGCCGCCTGGCAGTGGCTACCCATAACCTGGCAGCCGCTATGA", + "dna_sequence_length": 1689, + "functions": [ + "DUF2138 family protein, putative host defense protein" + ], + "id": "CDS_2213", + "location": [ + [ + "NC_000913", + 2336644, + "-", + 1689 + ] + ], + "md5": "edea138ab985ed1ca305a36900a198df", + "parent_gene": "", + "protein_md5": "7b92f248e81971ecfd209d3cac25be51", + "protein_translation": "MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL", + "protein_translation_length": 562, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007370" + ], + [ + "gene_synonym", + "ECK2223" + ], + [ + "gene_synonym", + "EcoGene:EG10423" + ], + [ + "gene_synonym", + "GI:16130166" + ], + [ + "gene_synonym", + "GeneID:946614" + ], + [ + "gene_synonym", + "JW2225" + ], + [ + "gene_synonym", + "NP_416734.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES4" + ], + [ + "gene_synonym", + "b2231" + ], + [ + "gene_synonym", + "gyrA" + ], + [ + "gene_synonym", + "hisW" + ], + [ + "gene_synonym", + "nalA" + ], + [ + "gene_synonym", + "nfxA" + ], + [ + "gene_synonym", + "norA" + ], + [ + "gene_synonym", + "parD" + ] + ], + "dna_sequence": "ATGAGCGACCTTGCGAGAGAAATTACACCGGTCAACATTGAGGAAGAGCTGAAGAGCTCCTATCTGGATTATGCGATGTCGGTCATTGTTGGCCGTGCGCTGCCAGATGTCCGAGATGGCCTGAAGCCGGTACACCGTCGCGTACTTTACGCCATGAACGTACTAGGCAATGACTGGAACAAAGCCTATAAAAAATCTGCCCGTGTCGTTGGTGACGTAATCGGTAAATACCATCCCCATGGTGACTCGGCGGTCTATGACACGATCGTCCGCATGGCGCAGCCATTCTCGCTGCGTTATATGCTGGTAGACGGTCAGGGTAACTTCGGTTCTATCGACGGCGACTCTGCGGCGGCAATGCGTTATACGGAAATCCGTCTGGCGAAAATTGCCCATGAACTGATGGCCGATCTCGAAAAAGAGACGGTCGATTTCGTTGATAACTATGACGGCACGGAAAAAATTCCGGACGTCATGCCAACCAAAATTCCTAACCTGCTGGTGAACGGTTCTTCCGGTATCGCCGTAGGTATGGCAACCAACATCCCGCCGCACAACCTGACGGAAGTCATCAACGGTTGTCTGGCGTATATTGATGATGAAGACATCAGCATTGAAGGGCTGATGGAACACATCCCGGGGCCGGACTTCCCGACGGCGGCAATCATTAACGGTCGTCGCGGTATTGAAGAAGCTTACCGTACCGGTCGCGGCAAGGTGTATATCCGCGCTCGCGCAGAAGTGGAAGTTGACGCCAAAACCGGTCGTGAAACCATTATCGTCCACGAAATTCCGTATCAGGTAAACAAAGCGCGCCTGATCGAGAAGATTGCGGAACTGGTAAAAGAAAAACGCGTGGAAGGCATCAGCGCGCTGCGTGACGAGTCTGACAAAGACGGTATGCGCATCGTGATTGAAGTGAAACGCGATGCGGTCGGTGAAGTTGTGCTCAACAACCTCTACTCCCAGACCCAGTTGCAGGTTTCTTTCGGTATCAACATGGTGGCATTGCACCATGGTCAGCCGAAGATCATGAACCTGAAAGACATCATCGCGGCGTTTGTTCGTCACCGCCGTGAAGTGGTGACCCGTCGTACTATTTTCGAACTGCGTAAAGCTCGCGATCGTGCTCATATCCTTGAAGCATTAGCCGTGGCGCTGGCGAACATCGACCCGATCATCGAACTGATCCGTCATGCGCCGACGCCTGCAGAAGCGAAAACTGCGCTGGTTGCTAATCCGTGGCAGCTGGGCAACGTTGCCGCGATGCTCGAACGTGCTGGCGACGATGCTGCGCGTCCGGAATGGCTGGAGCCAGAGTTCGGCGTGCGTGATGGTCTGTACTACCTGACCGAACAGCAAGCTCAGGCGATTCTGGATCTGCGTTTGCAGAAACTGACCGGTCTTGAGCACGAAAAACTGCTCGACGAATACAAAGAGCTGCTGGATCAGATCGCGGAACTGTTGCGTATTCTTGGTAGCGCCGATCGTCTGATGGAAGTGATCCGTGAAGAGCTGGAGCTGGTTCGTGAACAGTTCGGTGACAAACGTCGTACTGAAATCACCGCCAACAGCGCAGACATCAACCTGGAAGATCTGATCACCCAGGAAGATGTGGTCGTGACGCTCTCTCACCAGGGCTACGTTAAGTATCAGCCGCTTTCTGAATACGAAGCGCAGCGTCGTGGCGGGAAAGGTAAATCTGCCGCACGTATTAAAGAAGAAGACTTTATCGACCGACTGCTGGTGGCGAACACTCACGACCATATTCTGTGCTTCTCCAGCCGTGGTCGCGTCTATTCGATGAAAGTTTATCAGTTGCCGGAAGCCACTCGTGGCGCGCGCGGTCGTCCGATCGTCAACCTGCTGCCGCTGGAGCAGGACGAACGTATCACTGCGATCCTGCCAGTGACCGAGTTTGAAGAAGGCGTGAAAGTCTTCATGGCGACCGCTAACGGTACCGTGAAGAAAACTGTCCTCACCGAGTTCAACCGTCTGCGTACCGCCGGTAAAGTGGCGATCAAACTGGTTGACGGCGATGAGCTGATCGGCGTTGACCTGACCAGCGGCGAAGACGAAGTAATGCTGTTCTCCGCTGAAGGTAAAGTGGTGCGCTTTAAAGAGTCTTCTGTCCGTGCGATGGGCTGCAACACCACCGGTGTTCGCGGTATTCGCTTAGGTGAAGGCGATAAAGTCGTCTCTCTGATCGTGCCTCGTGGCGATGGCGCAATCCTCACCGCAACGCAAAACGGTTACGGTAAACGTACCGCAGTGGCGGAATACCCAACCAAGTCGCGTGCGACGAAAGGGGTTATCTCCATCAAGGTTACCGAACGTAACGGTTTAGTTGTTGGCGCGGTACAGGTAGATGACTGCGACCAGATCATGATGATCACCGATGCCGGTACGCTGGTACGTACTCGCGTTTCGGAAATCAGCATCGTGGGCCGTAACACCCAGGGCGTGATCCTCATCCGTACTGCGGAAGATGAAAACGTAGTGGGTCTGCAACGTGTTGCTGAACCGGTTGACGAGGAAGATCTGGATACCATCGACGGCAGTGCCGCGGAAGGGGACGATGAAATCGCTCCGGAAGTGGACGTTGACGACGAGCCAGAAGAAGAATAA", + "dna_sequence_length": 2628, + "functions": [ + "DNA gyrase (type II topoisomerase), subunit A" + ], + "id": "CDS_2214", + "location": [ + [ + "NC_000913", + 2339420, + "-", + 2628 + ] + ], + "md5": "89a36206d95674e4513b94cdc67bc527", + "parent_gene": "", + "protein_md5": "76463a0cc647d9eaf9e912ca32648522", + "protein_translation": "MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE", + "protein_translation_length": 875, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007374" + ], + [ + "gene_synonym", + "ECK2224" + ], + [ + "gene_synonym", + "EcoGene:EG11143" + ], + [ + "gene_synonym", + "GI:16130167" + ], + [ + "gene_synonym", + "GeneID:946607" + ], + [ + "gene_synonym", + "JW2226" + ], + [ + "gene_synonym", + "NP_416735.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17993" + ], + [ + "gene_synonym", + "b2232" + ], + [ + "gene_synonym", + "pufX" + ], + [ + "gene_synonym", + "ubiG" + ], + [ + "gene_synonym", + "yfaB" + ] + ], + "dna_sequence": "ATGAATGCCGAAAAATCGCCGGTAAACCATAACGTAGACCACGAAGAGATCGCTAAATTTGAAGCCGTCGCCTCCCGCTGGTGGGATCTGGAAGGTGAGTTCAAACCGCTGCACCGCATTAACCCGCTGCGTCTGGGCTATATTGCCGAGCGTGCTGGCGGTTTATTTGGCAAAAAGGTGCTCGATGTCGGTTGTGGCGGCGGCATTCTGGCCGAGAGTATGGCGCGCGAAGGCGCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCACTGGAAAGCGGCATTCAGGTGGATTACGTGCAGGAAACCGTGGAAGAGCACGCGGCAAAACATGCCGGGCAGTATGATGTGGTGACCTGCATGGAGATGCTGGAGCACGTCCCCGATCCGCAGTCAGTGGTCAGAGCCTGTGCGCAACTGGTGAAACCAGGCGGCGATGTCTTTTTCTCGACACTTAACCGCAACGGCAAGTCATGGCTGATGGCGGTGGTTGGTGCGGAATATATTTTGCGCATGGTGCCCAAAGGCACGCATGATGTGAAGAAGTTTATTAAACCGGCAGAATTGCTGGGCTGGGTGGATCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGA", + "dna_sequence_length": 723, + "functions": [ + "bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase" + ], + "id": "CDS_2215", + "location": [ + [ + "NC_000913", + 2339567, + "+", + 723 + ] + ], + "md5": "ed1a243e8d27869395b7eb2c096078b0", + "parent_gene": "", + "protein_md5": "c85df4f0f034c51fe420ff314ef1d243", + "protein_translation": "MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007377" + ], + [ + "gene_synonym", + "ECK2225" + ], + [ + "gene_synonym", + "EcoGene:EG12850" + ], + [ + "gene_synonym", + "GI:16130168" + ], + [ + "gene_synonym", + "GeneID:946595" + ], + [ + "gene_synonym", + "JW2227" + ], + [ + "gene_synonym", + "NP_416736.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45508" + ], + [ + "gene_synonym", + "b2233" + ], + [ + "gene_synonym", + "yfaF" + ], + [ + "gene_synonym", + "yfaJ" + ], + [ + "gene_synonym", + "yfaK" + ], + [ + "gene_synonym", + "yfaL" + ] + ], + "dna_sequence": "ATGCGGATTATCTTTCTACGCAAGGAGTATTTATCTTTACTCCCGTCAATGATTGCATCTCTTTTCTCTGCTAACGGTGTCGCGGCGGTCACTGATTCATGCCAGGGATATGATGTCAAAGCGAGTTGTCAGGCCAGCAGGCAAAGCCTTTCAGGCATTACGCAGGACTGGAGTATCGCTGATGGGCAATGGCTGGTTTTTTCGGATATGACCAATAACGCCAGCGGTGGGGCCGTATTTTTGCAACAAGGAGCGGAATTTTCACTATTACCAGAAAATGAAACTGGAATGACTCTGTTTGCCAATAACACCGTTACAGGAGAATATAATAACGGCGGGGCCATATTTGCTAAAGAAAACTCAACGCTGAATCTTACTGATGTTATTTTTTCCGGTAACGTCGCAGGCGGCTATGGTGGCGCAATCTATTCTTCTGGTACTAACGATACTGGTGCCGTCGATTTACGTGTCACTAACGCCATGTTTCGCAATAACATCGCTAATGATGGCAAAGGTGGCGCAATTTATACCATTAATAATGACGTTTATTTAAGTGATGTTATTTTTGATAACAACCAGGCATATACATCAACAAGTTACAGTGATGGCGATGGCGGGGCAATCGATGTTACCGATAATAATAGCGACAGCAAGCATCCTTCAGGTTATACGATAGTAAATAACACTGCCTTTACAAATAACACTGCCGAAGGTTATGGCGGGGCGATATATACCAATAGCGTGACGGCTCCCTATCTTATTGATATTTCTGTTGATGACAGCTACAGCCAGAACGGAGGCGTGTTAGTCGATGAGAACAATAGCGCAGCAGGCTATGGAGATGGTCCTTCCTCTGCGGCGGGTGGCTTTATGTATCTCGGCTTAAGTGAAGTTACCTTTGATATTGCCGACGGAAAAACGCTGGTTATTGGCAATACAGAGAATGACGGAGCTGTTGACTCTATTGCTGGTACCGGGTTAATCACCAAAACAGGTTCCGGCGATCTGGTACTTAATGCAGATAACAATGACTTTACTGGTGAGATGCAGATTGAAAACGGTGAAGTTACCCTGGGCCGCAGCAACTCCCTGATGAATGTCGGCGATACGCATTGCCAGGACGATCCGCAAGACTGCTACGGTCTGACGATAGGGAGTATTGATCAGTATCAGAATCAGGCTGAGCTAAACGTTGGCTCGACCCAACAAACTTTTGTGCACGCATTGACGGGCTTTCAGAATGGCACTTTAAATATCGATGCTGGTGGCAACGTTACTGTTAATCAGGGCAGTTTTGCTGGCATCATCGAAGGTGCTGGTCAGCTCACCATTGCGCAAAACGGCAGCTACGTGCTGGCAGGGGCGCAGTCGATGGCGCTAACCGGCGATATAGTCGTTGATGATGGTGCGGTGCTTTCGCTGGAAGGCGACGCGGCAGATCTTACCGCTCTCCAGGACGATCCGCAGTCGATCGTGTTAAACGGCGGTGTGCTCGATCTCTCTGATTTCTCCACCTGGCAGAGCGGCACATCATACAACGATGGCCTTGAAGTCAGTGGCAGCAGCGGAACGGTTATCGGCAGTCAGGATGTGGTAGATCTTGCAGGTGGCGACAATTTGCATATCGGCGGCGACGGGAAAGATGGCGTCTACGTGGTGGTCGATGCGAGCGACGGGCAGGTAAGTCTGGCAAACAATAATAGTTATTTGGGCACAACACAAATCGCCTCCGGTACGCTGATGGTGAGCGACAACTCGCAGCTTGGAGATACCCACTATAACCGCCAGGTTATCTTTACCGATAAGCAACAAGAAAGCGTGATGGAGATTACCTCCGACGTTGACACGCGTTCAGATGCGGCAGGCCACGGACGTGATATTGAAATGCGCGCCGACGGTGAAGTGGCAGTTGATGCGGGGGTAGACACGCAGTGGGGCGCACTGATGGCTGACAGCAGCGGGCAGCATCAGGATGAGGGTAGCACATTGACTAAAACGGGGGCTGGTACACTGGAGCTGACCGCCAGCGGTACAACGCAGTCGGCGGTACGTGTCGAAGAAGGCACCCTGAAAGGTGATGTTGCTGATATCCTTCCTTATGCTTCGTCACTGTGGGTTGGTGATGGGGCAACGTTCGTTACTGGCGCGGATCAGGATATTCAGTCAATTGATGCTATTTCCAGCGGCACTATCGACATCAGCGATGGTACGGTTTTGCGCCTGACCGGGCAGGATACTTCCGTCGCCCTTAATGCCTCACTATTTAACGGCGATGGGACGCTGGTGAATGCCACCGATGGTGTGACGTTGACAGGTGAGCTTAATACCAACCTTGAAACTGACAGCCTGACTTATCTTTCCAACGTGACGGTTAATGGCAATCTGACCAATACGTCCGGTGCGGTTAGCCTGCAAAATGGCGTCGCTGGCGATACGCTGACGGTAAACGGTGATTATACCGGCGGCGGTACGCTACTGCTCGATAGCGAATTAAACGGCGATGACTCGGTAAGCGATCAATTGGTGATGAACGGTAATACTGCTGGCAACACAACTGTGGTGGTTAACTCCATTACAGGGATTGGTGAGCCGACATCGACAGGCATTAAAGTGGTTGATTTCGCAGCTGATCCCACGCAGTTTCAAAACAATGCGCAGTTCAGTCTGGCAGGCAGCGGCTACGTCAATATGGGAGCGTATGACTACACGCTGGTGGAAGATAACAACGACTGGTATCTGCGATCGCAAGAAGTAACGCCGCCATCGCCACCTGATCCAGACCCGACTCCCGATCCTGATCCCACGCCGGATCCTGATCCAACACCCGACCCGGAACCTACGCCTGCTTACCAGCCGGTGTTGAATGCCAAAGTTGGCGGTTATCTTAATAACCTGCGGGCGGCAAATCAGGCGTTTATGATGGAGCGACGCGATCACGCAGGTGGCGATGGTCAGACGCTGAATTTACGTGTTATCGGCGGAGATTATCATTACACAGCAGCGGGGCAACTGGCTCAACATGAAGACACTTCTACGGTGCAACTTAGCGGCGATCTGTTTAGCGGGCGCTGGGGCACGGATGGCGAGTGGATGCTTGGGATTGTTGGTGGCTACAGCGATAACCAGGGCGACAGCCGCTCGAATATGACCGGAACTCGCGCCGATAACCAGAACCACGGTTATGCCGTTGGGCTGACATCAAGCTGGTTTCAGCACGGTAATCAGAAGCAAGGGGCCTGGCTGGATAGCTGGCTGCAATACGCGTGGTTTAGCAATGATGTTTCCGAACAAGAAGATGGCACAGATCATTACCACTCGTCGGGGATTATCGCCTCGCTGGAGGCGGGGTATCAGTGGTTACCGGGGCGTGGTGTGGTGATTGAACCGCAGGCGCAGGTGATTTATCAGGGCGTGCAGCAGGATGATTTTACCGCCGCTAACCGTGCGCGCGTGTCACAATCGCAGGGTGATGATATTCAGACGCGGCTGGGTTTACACAGCGAATGGCGTACCGCTGTTCATGTCATACCAACATTAGATCTGAATTATTATCACGATCCCCATTCGACGGAAATTGAAGAGGATGGCAGCACTATCAGTGACGATGCGGTGAAGCAACGGGGTGAAATAAAAGTGGGAGTCACGGGCAATATCAGTCAGCGAGTGTCCCTGCGCGGCAGCGTGGCGTGGCAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAA", + "dna_sequence_length": 3753, + "functions": [ + "adhesin" + ], + "id": "CDS_2216", + "location": [ + [ + "NC_000913", + 2344169, + "-", + 3753 + ] + ], + "md5": "de22672f0d961ad18cd7b4111e087290", + "parent_gene": "", + "protein_md5": "e7ea4d4071425a388aa0bd71c4e49ecb", + "protein_translation": "MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW", + "protein_translation_length": 1250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007383" + ], + [ + "gene_synonym", + "ECK2226" + ], + [ + "gene_synonym", + "EcoGene:EG10660" + ], + [ + "gene_synonym", + "GI:16130169" + ], + [ + "gene_synonym", + "GeneID:946612" + ], + [ + "gene_synonym", + "JW2228" + ], + [ + "gene_synonym", + "NP_416737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00452" + ], + [ + "gene_synonym", + "b2234" + ], + [ + "gene_synonym", + "dnaF" + ], + [ + "gene_synonym", + "nrdA" + ] + ], + "dna_sequence": "ATGAATCAGAATCTGCTGGTGACAAAGCGCGACGGTAGCACAGAGCGCATCAATCTCGACAAAATCCATCGCGTTCTGGATTGGGCGGCAGAAGGACTGCATAACGTTTCGATTTCCCAGGTCGAGCTGCGCTCCCACATTCAGTTTTATGACGGTATCAAGACCTCTGACATCCACGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAAGACTACACGGAAGAAGAGTTCAAGCAGATGGACACCTTTATCGATCACGACCGTGATATGACCTTCTCTTATGCTGCCGTTAAGCAGCTGGAAGGCAAATATCTGGTACAGAACCGCGTGACCGGCGAAATCTATGAGAGCGCCCAGTTCCTTTATATTCTAGTTGCCGCGTGCTTGTTCTCGAACTACCCGCGTGAAACGCGCCTGCAATATGTGAAGCGTTTTTACGACGCGGTTTCCACATTTAAAATTTCGCTGCCGACGCCAATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAGCGTTCCATACCGGCTGCATTCCGTTCTACAAACATTTCCAGACAGCGGTGAAATCCTGCTCTCAGGGCGGTGTGCGCGGCGGTGCGGCAACGCTGTTCTACCCGATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGTTGAAAAACAACCGTGGTGTGGAAGGCAACCGCGTGCGTCATATGGACTACGGGGTACAAATCAACAAACTGATGTATACCCGTCTGCTGAAAGGTGAAGATATCACCCTGTTCAGCCCGTCCGACGTACCGGGGCTGTACGACGCGTTCTTCGCCGATCAGGAAGAGTTTGAACGTCTGTATACCAAATATGAGAAAGACGACAGCATCCGCAAGCAGCGTGTGAAAGCCGTTGAGCTGTTCTCGCTGATGATGCAGGAACGTGCGTCTACCGGTCGTATCTATATTCAGAACGTTGACCACTGCAATACCCATAGCCCGTTTGATCCGGCCATCGCGCCAGTGCGTCAGTCTAACCTGTGCCTGGAGATAGCCCTGCCGACCAAACCGCTGAACGACGTCAACGACGAGAACGGTGAAATCGCGCTGTGTACGCTGTCTGCTTTCAACCTGGGCGCAATTAATAACCTGGATGAACTGGAAGAGCTGGCAATTCTGGCGGTTCGTGCACTTGACGCGCTGCTGGATTATCAGGATTACCCGATCCCGGCCGCCAAACGTGGAGCGATGGGTCGTCGTACGCTGGGTATTGGTGTGATCAACTTCGCTTACTACCTGGCGAAGCACGGTAAACGCTACTCCGACGGCAGCGCCAACAACCTGACGCATAAAACCTTCGAAGCCATTCAGTATTACCTGCTGAAAGCCTCTAATGAGCTGGCGAAAGAGCAAGGCGCGTGCCCGTGGTTTAACGAAACCACTTACGCGAAAGGGATCCTGCCGATCGATACCTATAAGAAAGATCTGGATACCATCGCTAATGAGCCGCTGCATTACGACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCGTCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGATCTCTGCCAACACCAACTACGATCCGTCACGCTTCCCGTCAGGAAAAGTGCCGATGCAGCAGTTGCTGAAAGACCTGCTCACCGCCTACAAATTCGGGGTCAAAACACTGTATTATCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGA", + "dna_sequence_length": 2286, + "functions": [ + "ribonucleoside-diphosphate reductase 1, alpha subunit" + ], + "id": "CDS_2217", + "location": [ + [ + "NC_000913", + 2344865, + "+", + 2286 + ] + ], + "md5": "0be45d70c8ebad0fd24c8f28c61288a9", + "parent_gene": "", + "protein_md5": "f9d2eccb4ff08f489d1e0eba3537db2b", + "protein_translation": "MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI", + "protein_translation_length": 761, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007386" + ], + [ + "gene_synonym", + "ECK2227" + ], + [ + "gene_synonym", + "EcoGene:EG10661" + ], + [ + "gene_synonym", + "GI:16130170" + ], + [ + "gene_synonym", + "GeneID:946732" + ], + [ + "gene_synonym", + "JW2229" + ], + [ + "gene_synonym", + "NP_416738.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69924" + ], + [ + "gene_synonym", + "b2235" + ], + [ + "gene_synonym", + "ftsB" + ], + [ + "gene_synonym", + "nrdB" + ] + ], + "dna_sequence": "ATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGAACCGATGTTCTTTGGTCAGCCGGTCAACGTGGCTCGCTACGATCAGCAAAAATATGACATCTTCGAAAAGCTGATCGAAAAGCAGCTCTCTTTCTTCTGGCGTCCGGAAGAAGTTGACGTCTCCCGCGACCGTATAGATTACCAGGCGCTGCCGGAGCACGAAAAACACATCTTTATCAGCAACCTGAAATATCAGACGCTGCTGGATTCCATTCAGGGTCGTAGCCCGAACGTGGCGCTATTGCCGCTTATTTCTATTCCGGAACTGGAAACCTGGGTCGAAACCTGGGCGTTCTCAGAAACGATTCATTCCCGTTCCTATACTCATATCATTCGTAATATCGTTAACGATCCGTCTGTTGTGTTTGACGATATCGTCACCAACGAGCAGATCCAGAAACGTGCGGAAGGGATCTCCAGCTATTACGATGAGCTGATCGAAATGACCAGCTACTGGCATCTGCTGGGCGAAGGTACCCACACCGTTAACGGTAAAACTGTGACCGTTAGCCTGCGCGAGCTGAAGAAAAAACTGTATCTCTGCCTGATGAGCGTTAACGCGCTGGAAGCGATTCGTTTCTACGTCAGCTTTGCTTGTTCCTTCGCATTTGCAGAACGCGAATTGATGGAAGGCAACGCCAAAATTATTCGCCTGATTGCCCGCGACGAAGCCCTGCACCTGACCGGCACCCAGCATATGCTGAATCTGCTGCGCAGCGGCGCGGACGATCCTGAGATGGCGGAAATTGCCGAAGAGTGTAAGCAGGAGTGCTATGACCTGTTTGTTCAGGCAGCTCAACAGGAGAAAGACTGGGCGGATTATCTGTTCCGCGACGGTTCGATGATTGGTCTGAATAAAGACATTCTCTGCCAGTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGA", + "dna_sequence_length": 1131, + "functions": [ + "ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein" + ], + "id": "CDS_2218", + "location": [ + [ + "NC_000913", + 2347384, + "+", + 1131 + ] + ], + "md5": "3954c190d9264d089267ea4d5f432a3d", + "parent_gene": "", + "protein_md5": "e2a65a197fb38a1c189138d23a86bc98", + "protein_translation": "MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL", + "protein_translation_length": 376, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007390" + ], + [ + "gene_synonym", + "ECK2228" + ], + [ + "gene_synonym", + "EcoGene:EG12360" + ], + [ + "gene_synonym", + "GI:16130171" + ], + [ + "gene_synonym", + "GeneID:946729" + ], + [ + "gene_synonym", + "JW2230" + ], + [ + "gene_synonym", + "NP_416739.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABW3" + ], + [ + "gene_synonym", + "b2236" + ], + [ + "gene_synonym", + "yfaE" + ] + ], + "dna_sequence": "ATGGCCCGCGTTACCCTGCGCATCACTGGCACACAACTGCTGTGCCAGGATGAACACCCTTCCCTTCTGGCGGCGCTGGAATCCCACAATGTGGCGGTTGAGTACCAGTGTCGCGAAGGTTACTGCGGCTCCTGTCGCACACGCCTGGTTGCAGGTCAAGTTGACTGGATTGCCGAACCGTTAGCCTTTATTCAGCCGGGGGAAATTTTGCCCTGTTGTTGCCGGGCAAAAGGCGATATTGAAATCGAGATGTGA", + "dna_sequence_length": 255, + "functions": [ + "ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance" + ], + "id": "CDS_2219", + "location": [ + [ + "NC_000913", + 2348514, + "+", + 255 + ] + ], + "md5": "7d50181cc6ba7bfa1746fc4797b5f55f", + "parent_gene": "", + "protein_md5": "953a383e057175bf1bc9183454c0f221", + "protein_translation": "MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007393" + ], + [ + "gene_synonym", + "ECK2229" + ], + [ + "gene_synonym", + "EcoGene:EG11422" + ], + [ + "gene_synonym", + "GI:16130172" + ], + [ + "gene_synonym", + "GeneID:946731" + ], + [ + "gene_synonym", + "JW2231" + ], + [ + "gene_synonym", + "NP_416740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27294" + ], + [ + "gene_synonym", + "b2237" + ], + [ + "gene_synonym", + "inaA" + ], + [ + "gene_synonym", + "yfaG" + ] + ], + "dna_sequence": "ATGGCAGTTTCAGCAAAGTACGACGAATTTAATCACTGGTGGGCAACAGAGGGCGACTGGGTTGAAGAGCCTAACTATCGCCGTAATGGTATGAGCGGGGTGCAATGCGTCGAGCGCAACGGCAAAAAGCTGTATGTAAAGCGCATGACGCATCATCTGTTTCATTCCGTACGTTATCCGTTCGGCCGACCAACGATTGTCCGTGAGGTTGCGGTAATTAAAGAACTGGAACGGGCCGGTGTCATCGTGCCGAAGATCGTTTTTGGTGAAGCGGTGAAAATTGAGGGTGAATGGCGAGCGTTGCTGGTGACTGAAGATATGGCGGGGTTCATCAGCATTGCTGACTGGTATGCCCAGCATGCAGTATCGCCTTATTCTGACGAAGTACGGCAAGCCATGTTGAAAGCAGTGGCGCTGGCGTTTAAGAAAATGCATAGCATTAATCGTCAGCATGGCTGTTGTTATGTTCGCCATATCTATGTGAAAACAGAAGGTAATGCAGAAGCTGGTTTTCTTGACCTGGAGAAAAGTCGTCGCCGCTTGCGTCGCGATAAAGCGATTAATCATGACTTCCGCCAGCTGGAAAAATATCTGGAGCCAATCCCCAAAGCGGACTGGGAGCAGGTGAAAGCGTATTACTACGCCATGTAA", + "dna_sequence_length": 651, + "functions": [ + "acid-inducible Kdo/WaaP family putative kinase" + ], + "id": "CDS_2220", + "location": [ + [ + "NC_000913", + 2349472, + "-", + 651 + ] + ], + "md5": "6767c781aba3714d2fe97f2bc5032722", + "parent_gene": "", + "protein_md5": "b5ec566bfbe36672b78744d86c0b9e27", + "protein_translation": "MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007397" + ], + [ + "gene_synonym", + "ECK2230" + ], + [ + "gene_synonym", + "EcoGene:EG12881" + ], + [ + "gene_synonym", + "GeneID:946718" + ], + [ + "gene_synonym", + "JW2232" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45505" + ], + [ + "gene_synonym", + "b2238" + ], + [ + "gene_synonym", + "yfaH" + ] + ], + "dna_sequence": "CAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACAGGGATTAGGCATCGCCTTACAACCAGAGTTAACGCTGAAAAGCATTGCAGGTGAATTGTGTTCCGTTCCTCTCGAACCAACTTTCTATCGACAGATTTCGTTGCTGGCTAAAGAAAAGCCGGTAGAAGGCAGTCCACTGTTTTTACTACAAATGTGCATGGAACAATTAGTGGCGATTGGAAAAATTTGA", + "dna_sequence_length": 243, + "id": "CDS_2221", + "location": [ + [ + "NC_000913", + 2349651, + "+", + 243 + ] + ], + "md5": "04b7b27ba230e18c6b0395e2346c5f44", + "parent_gene": "", + "protein_md5": "4fcd6ff338f2b663419ad3d68de54433", + "protein_translation": "QIKCEFNQADTAMNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007399" + ], + [ + "gene_synonym", + "ECK2231" + ], + [ + "gene_synonym", + "EcoGene:EG10399" + ], + [ + "gene_synonym", + "GI:16130174" + ], + [ + "gene_synonym", + "GeneID:946725" + ], + [ + "gene_synonym", + "JW2233" + ], + [ + "gene_synonym", + "NP_416742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09394" + ], + [ + "gene_synonym", + "b2239" + ], + [ + "gene_synonym", + "glpQ" + ] + ], + "dna_sequence": "ATGAAATTGACGCTGAAAAACCTTAGCATGGCGATCATGATGAGCACTATAGTCATGGGAAGCAGTGCAATGGCGGCGGACAGCAACGAAAAAATAGTCATCGCCCATCGCGGTGCCAGTGGATATTTGCCGGAGCATACGCTGCCAGCAAAAGCGATGGCGTATGCGCAGGGAGCGGATTATCTGGAACAGGATTTGGTGATGACCAAAGACGACAATCTGGTTGTTCTGCATGACCATTACCTCGATCGTGTTACTGATGTTGCCGATCGTTTCCCGGATCGGGCGCGCAAAGACGGTCGTTACTACGCGATAGATTTCACGCTGGATGAAATTAAGTCGTTGAAATTTACCGAAGGTTTCGATATTGAAAACGGTAAAAAAGTGCAGACTTATCCGGGGCGTTTCCCAATGGGTAAGTCCGACTTCCGGGTGCACACCTTTGAAGAAGAGATTGAATTTGTTCAGGGGTTAAATCACTCTACCGGGAAAAATATCGGTATTTATCCAGAAATCAAAGCGCCGTGGTTCCATCATCAGGAAGGGAAGGATATTGCGGCAAAAACGCTGGAAGTGCTGAAGAAATATGGTTACACCGGTAAAGACGATAAAGTTTATTTGCAATGTTTTGATGCTGATGAGCTGAAGCGTATTAAGAATGAGCTGGAACCCAAAATGGGCATGGAGCTCAATCTGGTACAGCTGATTGCCTATACCGACTGGAATGAAACGCAGCAGAAACAGCCGGATGGAAGCTGGGTTAATTACAACTACGACTGGATGTTTAAGCCGGGTGCCATGAAACAGGTGGCGGAATATGCAGATGGTATTGGTCCGGATTACCATATGTTGATTGAGGAGACATCGCAGCCGGGTAATATCAAACTCACTGGCATGGTGCAAGATGCTCAGCAGAATAAACTGGTAGTGCATCCTTATACCGTGCGGTCAGATAAACTGCCTGAATACACTCCTGATGTGAATCAGTTATATGATGCTCTGTATAACAAAGCGGGTGTAAATGGGCTGTTTACTGATTTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAA", + "dna_sequence_length": 1077, + "functions": [ + "periplasmic glycerophosphodiester phosphodiesterase" + ], + "id": "CDS_2222", + "location": [ + [ + "NC_000913", + 2351011, + "-", + 1077 + ] + ], + "md5": "2d145a337beb52b3f5a5d0da6a6f0802", + "parent_gene": "", + "protein_md5": "67882c4e9737003286e3907e7f333289", + "protein_translation": "MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE", + "protein_translation_length": 358, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007401" + ], + [ + "gene_synonym", + "ECK2232" + ], + [ + "gene_synonym", + "EcoGene:EG10401" + ], + [ + "gene_synonym", + "GI:16130175" + ], + [ + "gene_synonym", + "GeneID:946704" + ], + [ + "gene_synonym", + "JW2234" + ], + [ + "gene_synonym", + "NP_416743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08194" + ], + [ + "gene_synonym", + "b2240" + ], + [ + "gene_synonym", + "glpT" + ] + ], + "dna_sequence": "ATGTTGAGTATTTTTAAACCAGCGCCACACAAAGCGCGCTTACCTGCCGCGGAGATCGATCCGACTTATCGTCGATTGCGCTGGCAAATTTTCCTGGGGATATTCTTTGGCTATGCGGCTTACTATTTGGTTCGTAAGAACTTTGCGCTTGCTATGCCTTATCTGGTTGAGCAGGGATTCTCACGCGGTGATTTAGGTTTTGCCCTTTCGGGGATCTCGATTGCTTATGGATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTGCGGTTGGTTCCAGGGGATGGGGTGGCCGCCGTGTGGTCGTACTATGGTGCACTGGTGGTCGCAGAAAGAACGTGGCGGCATTGTGTCAGTGTGGAACTGTGCGCACAACGTCGGTGGTGGTATTCCGCCGCTGCTGTTCCTGCTGGGGATGGCCTGGTTCAATGACTGGCATGCGGCGCTCTATATGCCTGCTTTCTGCGCCATTCTGGTGGCATTATTCGCCTTTGCGATGATGCGCGATACCCCGCAATCCTGTGGCTTGCCGCCGATCGAAGAGTACAAAAATGATTATCCGGACGACTATAACGAAAAAGCGGAACAGGAGCTGACGGCGAAGCAAATCTTCATGCAGTACGTACTGCCGAACAAACTGCTGTGGTATATCGCCATCGCCAACGTGTTCGTTTATCTGCTGCGTTACGGCATCCTCGACTGGTCACCGACTTATCTGAAAGAGGTTAAGCATTTCGCGCTAGATAAATCCTCCTGGGCCTACTTCCTTTATGAATATGCAGGTATTCCGGGCACTCTGCTGTGCGGCTGGATGTCGGATAAAGTCTTCCGTGGCAACCGTGGGGCAACCGGCGTTTTCTTTATGACACTGGTGACCATCGCGACTATCGTTTACTGGATGAACCCGGCAGGTAACCCAACCGTCGATATGATTTGTATGATTGTTATCGGCTTCCTGATCTACGGTCCTGTGATGCTGATCGGTCTGCATGCGCTGGAACTGGCACCGAAAAAAGCGGCAGGTACGGCAGCGGGCTTTACCGGGCTGTTTGGTTACCTGGGCGGTTCGGTGGCGGCGAGCGCGATTGTTGGCTACACCGTGGACTTCTTCGGCTGGGATGGCGGCTTTATGGTAATGATTGGCGGCAGCATTCTGGCGGTTATCTTGTTGATTGTTGTGATGATTGGCGAAAAACGTCGCCATGAACAATTACTGCAAGAACGCAACGGAGGCTAA", + "dna_sequence_length": 1359, + "functions": [ + "sn-glycerol-3-phosphate transporter" + ], + "id": "CDS_2223", + "location": [ + [ + "NC_000913", + 2352374, + "-", + 1359 + ] + ], + "md5": "667dc72bfe7eaddd2d5fc2e3541f7ce1", + "parent_gene": "", + "protein_md5": "3cb27b5035c6584dc64a43127e022cb8", + "protein_translation": "MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERNGG", + "protein_translation_length": 452, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007422" + ], + [ + "gene_synonym", + "ECK2233" + ], + [ + "gene_synonym", + "EcoGene:EG10391" + ], + [ + "gene_synonym", + "GI:16130176" + ], + [ + "gene_synonym", + "GeneID:946713" + ], + [ + "gene_synonym", + "JW2235" + ], + [ + "gene_synonym", + "NP_416744.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C0" + ], + [ + "gene_synonym", + "b2241" + ], + [ + "gene_synonym", + "glpA" + ] + ], + "dna_sequence": "ATGAAAACTCGCGACTCGCAATCAAGTGACGTGATTATCATTGGCGGCGGCGCAACGGGAGCCGGGATTGCCCGCGACTGTGCCCTGCGCGGGCTGCGCGTGATTTTGGTTGAGCGCCACGACATCGCAACCGGTGCCACCGGGCGTAACCACGGCCTGCTGCACAGCGGTGCGCGCTATGCGGTAACCGATGCGGAATCGGCCCGCGAATGCATTAGTGAAAACCAGATCCTGAAACGCATTGCACGTCACTGCGTTGAACCAACCAACGGCCTGTTTATCACCCTGCCGGAAGATGACCTCTCCTTCCAGGCCACTTTTATTCGCGCCTGCGAAGAAGCAGGGATCAGCGCAGAAGCTATAGACCCGCAGCAAGCGCGCATTATCGAACCTGCCGTTAACCCGGCACTGATTGGCGCGGTGAAAGTTCCGGATGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAAACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGCGTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAACTGATGACCTATCGGCTGATGGCTGAATGGGCTACCGACGCGGTATGCCGCAAACTGGGCAACACGCGCCCCTGTACGACTGCCGATCTGGCACTGCCTGGTTCACAAGAACCCGCTGAAGTTACCTTGCGTAAAGTCATCTCCCTGCCTGCCCCGCTGCGCGGTTCTGCGGTTTATCGTCATGGCGATCGCACGCCTGCCTGGCTGAGCGAAGGCCGTCTGCACCGTAGCCTGGTATGTGAGTGCGAAGCGGTAACTGCGGGTGAAGTGCAGTACGCGGTAGAAAATTTAAACGTTAATAGCCTGCTGGATTTACGCCGTCGTACCCGTGTGGGGATGGGCACCTGCCAGGGCGAACTCTGCGCCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGA", + "dna_sequence_length": 1629, + "functions": [ + "anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit" + ], + "id": "CDS_2224", + "location": [ + [ + "NC_000913", + 2352647, + "+", + 1629 + ] + ], + "md5": "2c9c0d6904b9a04e20e5420d62760eef", + "parent_gene": "", + "protein_md5": "d900316f35f93d7ed5b6392a307ddcb3", + "protein_translation": "MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL", + "protein_translation_length": 542, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007424" + ], + [ + "gene_synonym", + "ECK2234" + ], + [ + "gene_synonym", + "EcoGene:EG10392" + ], + [ + "gene_synonym", + "GI:16130177" + ], + [ + "gene_synonym", + "GeneID:946733" + ], + [ + "gene_synonym", + "JW2236" + ], + [ + "gene_synonym", + "NP_416745.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13033" + ], + [ + "gene_synonym", + "b2242" + ], + [ + "gene_synonym", + "glpB" + ], + [ + "gene_synonym", + "glpC" + ], + [ + "gene_synonym", + "psi-51" + ] + ], + "dna_sequence": "ATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCTGCGAAATGATCCTGATGCCCGCCTGCTTCGGTCTGGCCGATGACAAACTGTGGCGTTGGTTGAATGAAAAACTACCTTGTTCACTGATGCTTTTGCCAACGCTGCCGCCTTCCGTGCTGGGCATTCGTCTGCAAAACCAGTTACAGCGCCAGTTTGTGCGCCAGGGTGGCGTGTGGATGCCGGGCGATGAAGTGAAAAAAGTGACCTGTAAAAATGGCGTAGTGAACGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGTGCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTGTTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGA", + "dna_sequence_length": 1260, + "functions": [ + "anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit" + ], + "id": "CDS_2225", + "location": [ + [ + "NC_000913", + 2354265, + "+", + 1260 + ] + ], + "md5": "42f09078a14ef676fdee1bb842a10ca0", + "parent_gene": "", + "protein_md5": "a4f456db1f3984264180d0e626155bd5", + "protein_translation": "MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007426" + ], + [ + "gene_synonym", + "ECK2235" + ], + [ + "gene_synonym", + "EcoGene:EG10393" + ], + [ + "gene_synonym", + "GI:16130178" + ], + [ + "gene_synonym", + "GeneID:946735" + ], + [ + "gene_synonym", + "JW2237" + ], + [ + "gene_synonym", + "NP_416746.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A996" + ], + [ + "gene_synonym", + "b2243" + ], + [ + "gene_synonym", + "glpB" + ], + [ + "gene_synonym", + "glpC" + ] + ], + "dna_sequence": "ATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGAGGCGCTGAAATATTGCATCAACTGCAAACGTTGTGAAGTCGCCTGCCCGTCCGATGTGAAGATTGGCGATATTATCCAGCGCGCGCGGGCGAAATATGACACCACGCGCCCGTCGCTGCGTAATTTTGTGTTGAGTCATACCGACCTGATGGGTAGCGTTTCCACGCCGTTCGCACCAATCGTCAACACCGCTACCTCGCTGAAACCGGTGCGGCAGCTGCTTGATGCGGCGTTAAAAATCGATCATCGCCGCACGCTACCGAAATACTCCTTCGGCACGTTCCGTCGCTGGTATCGCAGCGTGGCGGCTCAGCAAGCACAATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGACGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAA", + "dna_sequence_length": 1191, + "functions": [ + "anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster" + ], + "id": "CDS_2226", + "location": [ + [ + "NC_000913", + 2355521, + "+", + 1191 + ] + ], + "md5": "45237fb17f50cc8f62020174ae91e8a7", + "parent_gene": "", + "protein_md5": "8882723c09e389ce65ef441feaedcfc6", + "protein_translation": "MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007429" + ], + [ + "gene_synonym", + "ECK2236" + ], + [ + "gene_synonym", + "EcoGene:EG12323" + ], + [ + "gene_synonym", + "GI:16130179" + ], + [ + "gene_synonym", + "GeneID:946737" + ], + [ + "gene_synonym", + "JW2238" + ], + [ + "gene_synonym", + "NP_416747.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37014" + ], + [ + "gene_synonym", + "b2244" + ], + [ + "gene_synonym", + "yfaD" + ] + ], + "dna_sequence": "ATGACCGAATCAACAACCTCCTCCCCGCATGATGCGGTATTTAAAACCTTTATGTTCACACCCGAAACCGCACGGGATTTTCTCGAAATACATTTACCAGAACCACTGCGCAAGCTTTGCAACCTGCAAACCTTACGCCTGGAACCCACTAGTTTTATTGAAAAAAGTTTACGCGCTTACTACTCGGATGTTTTGTGGTCCGTGGAAACCAGCGACGGTGACGGCTATATCTACTGCGTGATTGAACATCAAAGCTCTGCAGAAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCAGTTGTACACCGAAGCTTTTCTGTTGGTGGATATCACCATCGTACCTGACGATGAGATCATGCAACATCGGCGTATAGCTCTGCTGGAACTGATTCAAAAGCATATTCGCGACCGCGATTTAATCGGCATGGTCGACAGGATCACCACGCTTTTGGTTAGAGGCTTCACTAATGACAGCCAGCTACAAACACTGTTTAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAA", + "dna_sequence_length": 900, + "functions": [ + "transposase_31 family protein" + ], + "id": "CDS_2227", + "location": [ + [ + "NC_000913", + 2356904, + "+", + 900 + ] + ], + "md5": "aa14b1dc7a4c897da797bca0951b4c72", + "parent_gene": "", + "protein_md5": "9400523274123c62ddbfa002b9158ae1", + "protein_translation": "MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHQDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFLLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285064" + ], + [ + "gene_synonym", + "ECK2237" + ], + [ + "gene_synonym", + "EcoGene:EG14427" + ], + [ + "gene_synonym", + "GeneID:1450280" + ], + [ + "gene_synonym", + "JW5964" + ], + [ + "gene_synonym", + "b4543" + ], + [ + "gene_synonym", + "ypaA" + ] + ], + "dna_sequence": "AAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAA", + "dna_sequence_length": 198, + "id": "CDS_2228", + "location": [ + [ + "NC_000913", + 2357804, + "+", + 198 + ] + ], + "md5": "d87eed20cc6a22e735f9cfc978d0e2ce", + "parent_gene": "", + "protein_md5": "b55b7a40d8db35fec9372898672a0878", + "protein_translation": "KERLMTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007431" + ], + [ + "gene_synonym", + "ECK2238" + ], + [ + "gene_synonym", + "EcoGene:EG14083" + ], + [ + "gene_synonym", + "GI:16130180" + ], + [ + "gene_synonym", + "GeneID:948054" + ], + [ + "gene_synonym", + "JW2239" + ], + [ + "gene_synonym", + "NP_416748.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76469" + ], + [ + "gene_synonym", + "b2245" + ], + [ + "gene_synonym", + "rhmA" + ], + [ + "gene_synonym", + "yfaU" + ] + ], + "dna_sequence": "ATGAACGCATTATTAAGCAATCCCTTTAAAGAACGTTTACGCAAGGGCGAAGTGCAAATTGGTCTGTGGTTAAGCTCAACGACTGCCTATATGGCAGAAATTGCCGCCACTTCTGGTTATGACTGGTTGCTGATTGACGGGGAGCACGCGCCAAACACCATTCAGGATCTTTATCATCAGCTACAGGCGGTAGCGCCCTATGCCAGCCAACCCGTGATCCGTCCGGTGGAAGGCAGTAAACCGCTGATTAAACAAGTCCTGGATATTGGCGCGCAAACTCTACTGATCCCGATGGTCGATACTGCCGAACAGGCACGTCAGGTGGTGTCTGCCACGCGCTATCCTCCCTACGGTGAGCGTGGTGTCGGGGCCAGTGTGGCACGGGCTGCGCGCTGGGGACGCATTGAGAATTACATGGCGCAAGTTAACGATTCGCTTTGTCTGTTGGTGCAGGTGGAAAGTAAAACGGCACTGGATAACCTGGACGAAATCCTCGACGTCGAAGGGATTGATGGCGTGTTTATTGGACCTGCGGATCTTTCTGCGTCGTTGGGCTACCCGGATAACGCCGGGCACCCGGAAGTGCAGCGAATTATTGAAACCAGTATTCGGCGGATCCGTGCTGCGGGTAAAGCGGCTGGTTTTCTGGCTGTGGCTCCTGATATGGCGCAGCAATGCCTGGCGTGGGGAGCGAACTTTGTCGCTGTTGGCGTTGACACGATGCTCTACAGCGATGCCCTGGATCAACGACTGGCGATGTTTAAATCAGGCAAAAATGGGCCACGCATAAAAGGTAGTTATTGA", + "dna_sequence_length": 804, + "functions": [ + "2-keto-3-deoxy-L-rhamnonate aldolase" + ], + "id": "CDS_2229", + "location": [ + [ + "NC_000913", + 2358845, + "-", + 804 + ] + ], + "md5": "77c73d1f444f00d902bd6d46db281b03", + "parent_gene": "", + "protein_md5": "e91610c3c11c3cb4105ed928db5f1743", + "protein_translation": "MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007433" + ], + [ + "gene_synonym", + "ECK2239" + ], + [ + "gene_synonym", + "EcoGene:EG14084" + ], + [ + "gene_synonym", + "GI:90111406" + ], + [ + "gene_synonym", + "GeneID:945796" + ], + [ + "gene_synonym", + "JW2240" + ], + [ + "gene_synonym", + "NP_416749.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76470" + ], + [ + "gene_synonym", + "b2246" + ], + [ + "gene_synonym", + "rhmT" + ], + [ + "gene_synonym", + "yfaV" + ] + ], + "dna_sequence": "ATGAGCACCGCTTTGCTTGACGCCGTGGTGAAGAAAAACCGTGTGCGTTTAATTCCGTTTATGTTGGCGCTGTATGTGCTGGCGTTTCTCGACCGTTCGAATATCGGTTTTGCCAAACAGACCTACCAGATTGATACCGGGTTGAGTAATGAAGCTTATGCGCTGGGAGCAGGCATTTTCTTTGTGGTATATGCGTTTCTGGGTGTTCCGGCGAATCTTTTGATGCGCAAACTGGGGGCCAGAACCTGGATTGGTACGACAACACTGCTGTGGGGATTTCTTTCGGCAGCCATGGCATGGGCCGATACTGAAGCGAAATTTCTGATAGTTCGCACTCTGCTTCGTGCTGCGGAGGCCGGATTTTTCCCTGGTATGATTTATCTCACCTCGCAATGGTTTCCGCAGCGTAATCGCGCCAGCATTATGGGGCTGTTCTATATGGGCGCACCGCTGGCGTTAACACTGGGATCACCGCTTTCCGGCGCGCTGTTGGAGATGCATGGATTTATGGGGCATCCCGGCTGGTTCTGGATGTTTGTGATTGAAGGATTGTTGGCAGTCGGTGCTGGGGTATTCACATTCTTTTGGCTTGATGACACACCGGAGCAGGCACGTTTTCTGAGTAAACAAGAAAAAACGTTGCTTATCAATCAACTGGCAAGTGAAGAACAACAGAAAGTGACTTCTCGGCTGAGCGATGCGCTGCGTAATGGCCGAGTCTGGCAACTAGCGATTATCTACCTGACCATTCAGGTGGCGGTTTACGGATTAATTTTCTTCCTGCCGACCCAGGTTGCGGCATTGCTGGGAACAAAAGTGGGCTTTACAGCGTCGGTGGTCACCGCCATTCCGTGGGTTGCGGCCTTGTTTGGGACCTGGCTTATTCCGCGCTATTCCGATAAAACCGGCGAACGGCGTAATGTCGCAGCGCTGACATTACTGGCGGCGGGCATTGGTATTGGTCTGTCCGGGCTGCTTTCTCCAGTAATGGCGATCGTAGCGCTGTGTGTTGCAGCTATCGGGTTTATTGCCGTGCAGCCAGTGTTCTGGACGATGCCGACACAACTGCTTTCCGGTACGGCGCTGGCTGCGGGAATTGGTTTTGTAAACCTGTTTGGTGCAGTGGGCGGGTTTATTGCCCCGATCCTGCGCGTGAAAGCAGAAACGTTATTTGCCAGCGATGCGGCGGGATTACTGACGCTGGCAGCGGTGGCGGTCATCGGTTCGCTGATTATTTTCACTCTGCGTGTAAATCGCACTGTTGCGCAGACCGACGTGGCACATCATTAA", + "dna_sequence_length": 1290, + "functions": [ + "putative L-rhamnonate transporter" + ], + "id": "CDS_2230", + "location": [ + [ + "NC_000913", + 2360152, + "-", + 1290 + ] + ], + "md5": "ac2f9c643ddc1bfaedfabe9d682dab22", + "parent_gene": "", + "protein_md5": "11c2f1945beb51cbf672ba040f973958", + "protein_translation": "MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLRAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007436" + ], + [ + "gene_synonym", + "ECK2240" + ], + [ + "gene_synonym", + "EcoGene:EG14085" + ], + [ + "gene_synonym", + "GI:226524733" + ], + [ + "gene_synonym", + "GeneID:945881" + ], + [ + "gene_synonym", + "JW2241" + ], + [ + "gene_synonym", + "NP_416750.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77215" + ], + [ + "gene_synonym", + "b2247" + ], + [ + "gene_synonym", + "rhmD" + ], + [ + "gene_synonym", + "yfaW" + ] + ], + "dna_sequence": "ATGACCCTACCAAAAATTAAACAGGTTCGCGCCTGGTTTACTGGCGGTGCGACAGCAGAAAAAGGCGCTGGCGGCGGTGATTATCACGACCAGGGGGCGAATCACTGGATAGACGATCATATTGCCACCCCGATGAGTAAATACCGCGATTACGAGCAGTCACGCCAGTCATTTGGCATTAACGTTCTTGGCACGTTGGTTGTTGAAGTCGAAGCAGAAAACGGCCAGACCGGATTCGCCGTTTCGACAGCCGGTGAAATGGGCTGTTTTATTGTCGAAAAACATCTTAACCGTTTCATTGAGGGTAAATGTGTCAGTGATATCAAACTGATCCACGATCAAATGCTCAGTGCCACCCTGTATTACTCCGGCTCTGGTGGCCTGGTGATGAATACGATTTCTTGTGTCGATCTGGCTCTGTGGGATCTGTTCGGCAAAGTGGTCGGGCTTCCGGTTTATAAACTTTTAGGCGGCGCTGTTCGTGATGAGATTCAGTTCTACGCCACAGGTGCGCGTCCGGATCTGGCAAAAGAGATGGGCTTTATCGGTGGCAAAATGCCGACGCACTGGGGGCCACATGATGGCGATGCGGGGATCCGCAAAGATGCCGCTATGGTCGCGGATATGCGTGAAAAATGCGGTGAGGATTTCTGGTTAATGCTCGACTGCTGGATGAGTCAGGACGTGAACTATGCGACCAAACTGGCCCACGCTTGCGCGCCCTATAACCTGAAATGGATCGAAGAGTGCCTGCCGCCACAGCAGTATGAAAGTTATCGCGAACTGAAACGCAACGCGCCAGTCGGAATGATGGTCACCAGCGGTGAGCACCACGGCACACTGCAATCTTTTCGTACGCTTTCAGAAACCGGTATCGACATTATGCAGCCGGATGTTGGCTGGTGCGGTGGTTTAACCACGCTGGTGGAAATTGCCGCAATCGCCAAATCCAGGGGGCAACTGGTGGTGCCGCACGGTTCGTCTGTTTACTCTCACCATGCGGTGATCACCTTCACCAATACGCCATTCAGCGAATTCCTGATGACCAGCCCGGATTGTTCAACGATGCGTCCGCAGTTTGACCCGATTCTGCTCAATGAGCCGGTTCCGGTGAATGGTCGTATTCATAAATCAGTGCTTGATAAACCCGGTTTTGGCGTCGAACTCAATCGTGACTGCAATTTGAAACGCCCCTACAGCCACTAA", + "dna_sequence_length": 1206, + "functions": [ + "L-rhamnonate dehydratase" + ], + "id": "CDS_2231", + "location": [ + [ + "NC_000913", + 2361414, + "-", + 1206 + ] + ], + "md5": "8f8bfd36a2f37a57148d67b1200f1576", + "parent_gene": "", + "protein_md5": "847059085d808ee7e5bcb3ba0d1aae48", + "protein_translation": "MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH", + "protein_translation_length": 401, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007438" + ], + [ + "gene_synonym", + "ECK2241" + ], + [ + "gene_synonym", + "EcoGene:EG14086" + ], + [ + "gene_synonym", + "GI:16130183" + ], + [ + "gene_synonym", + "GeneID:944752" + ], + [ + "gene_synonym", + "JW2242" + ], + [ + "gene_synonym", + "NP_416751.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77732" + ], + [ + "gene_synonym", + "b2248" + ], + [ + "gene_synonym", + "rhmR" + ], + [ + "gene_synonym", + "yfaX" + ] + ], + "dna_sequence": "ATGTTGGAATCAAGCAAAGTTCCCGCCCTGACACGGGCTATTGATATTCTCAATTTGATTGCCCGCATTGGCCCCTGTAGTGCTGCGACGATCATTGACACATTGGGAATCCCTAAAAGCACGGCCTATTTGCTGCTTAATGAACTCAGGCGTCAGCGTTTTCTTAGCCTTGATCACCAGGAAAATTTTTGTTTGTGGACCAGGCTGGTGGAGCTTTCCGGTCATGCGTTAAGCAAGATGGATCTCCGGGAACTGGCTCGACCGCGTTTGACGCAACTGATGGATACCACCGGGCTGTTATGTCACCTGGGGATTATTGATAACGGCAGCGCTTATTACATTTTGAAAGTGGAGTCATCAGCCACTATCAGCGTGCGTTCCCATGAAGGAAAAAGCCTTTCGCTTTATCGCTCCGGAATAGGTAAATGCCTGCTTGCCTGGCAACCTGCAGCGGTACAGCAAAGTATTATCGAAGGGCTGGTCTGGGAGCAGGCGACACCCACAACGATTACTCATCCACAGCAACTTCACGAAGAACTGGCGCGTATTCGCCGTCAGGGCTGGAGCTATGACAACGGCGAAGATTACGCCGATGTCCGTTGTGTCGCTGCGCCGGTGTTTAACGCCAATAACGAGCTTACCGCTGCGATCTCGGTGGTCGGTACCCGCTTACAAATCAATGAAGAATACCGTGATTATCTGGCGGGCAAGGCCATTGCCTGCGCCAGGGATATTTCACGTCTGTTGGGATGGAAAAGTCCCTTTGACTTACAAGCCTCATAA", + "dna_sequence_length": 783, + "functions": [ + "putative DNA-binding transcriptional regulator for the rhm operon" + ], + "id": "CDS_2232", + "location": [ + [ + "NC_000913", + 2362211, + "-", + 783 + ] + ], + "md5": "28c97c7e0e07c3c0da21c30c1d604215", + "parent_gene": "", + "protein_md5": "e64eb0a9e0852d8c674525b8f146f74d", + "protein_translation": "MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLGWKSPFDLQAS", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007441" + ], + [ + "gene_synonym", + "ECK2242" + ], + [ + "gene_synonym", + "EcoGene:EG14087" + ], + [ + "gene_synonym", + "GI:16130184" + ], + [ + "gene_synonym", + "GeneID:945478" + ], + [ + "gene_synonym", + "JW2243" + ], + [ + "gene_synonym", + "NP_416752.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77808" + ], + [ + "gene_synonym", + "b2249" + ], + [ + "gene_synonym", + "cinA" + ], + [ + "gene_synonym", + "yfaY" + ] + ], + "dna_sequence": "ATGTTAAAAGTGGAAATGTTATCCACCGGGGATGAAGTGTTACACGGGCAAATCGTTGACACTAACGCTGCCTGGCTGGCCGATTTTTTCTTTCATCAGGGGTTGCCATTATCTCGCCGCAATACGGTGGGGGATAACCTTGATGACTTAGTCACCATTCTTCGCGAACGTAGTCAGCACGCCGATGTGCTGATCGTTAACGGCGGGCTGGGACCGACCAGCGATGATTTAAGCGCACTCGCCGCTGCGACAGCAAAAGGTGAAGGCCTGGTGCTGCATGAAGCCTGGCTCAAAGAGATGGAACGCTATTTCCACGAACGTGGACGAGTAATGGCACCGAGCAACCGTAAACAAGCGGAGCTGCCTGCCAGTGCTGAATTTATCAATAACCCGGTAGGCACCGCCTGTGGTTTTGCCGTGCAGCTTAATCGTTGCCTGATGTTCTTTACTCCCGGCGTACCGTCAGAATTTAAGGTGATGGTCGAGCACGAAATCCTGCCGCGCCTGCGCGAGCGTTTTTCTTTACCGCAGCCGCCGGTTTGTCTGCGTTTGACTACTTTTGGTCGTTCGGAAAGCGATCTGGCACAAAGCCTGGACACTCTACAACTGCCGCCGGGCGTAACAATGGGCTATCGCTCCTCAATGCCTATCATCGAACTGAAACTCACCGGACCGGCAAGCGAGCAACAGGCGATGGAAAAACTGTGGCTGGATGTTAAACGTGTTGCCGGACAGAGCGTGATTTTCGAAGGCACTGAAGGACTGCCCGCGCAGATCAGTCGCGAATTGCAAAACCGCCAGTTCAGCCTGACGTTGAGCGAGCAATTCACCGGTGGTTTATTGGCTTTGCAACTTTCTCGCGCAGGTGCTCCATTGCTGGCGTGTGAAGTGGTTCCTTCACAGGAGGAAACCCTGGCGCAAACTGCGCACTGGATTACAGAACGGCGGGCCAACCATTTTGCCGGGCTGGCACTGGCTGTTTCGGGTTTCGAGAACGAGCATCTCAACTTTGCGCTAGCCACGCCAGACGGCACTTTCGCTCTGCGTGTGCGTTTCAGCACTACGCGCTACAGCCTGGCTATCCGTCAGGAAGTGTGCGCAATGATGGCACTGAATATGCTGCGCCGTTGGTTAAACGGCCAGGATATCGCCAGTGAGCATGGCTGGATTGAGGTTGTTGAGTCCATGACCTTATCTGTCTGA", + "dna_sequence_length": 1203, + "functions": [ + "inactive PncC family protein" + ], + "id": "CDS_2233", + "location": [ + [ + "NC_000913", + 2363633, + "-", + 1203 + ] + ], + "md5": "450e6267419fa05cf506346cbcb701d9", + "parent_gene": "", + "protein_md5": "b4f20822833265e17d526ccda1e3cb4f", + "protein_translation": "MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVKRVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVVPSQEETLAQTAHWITERRANHFAGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007445" + ], + [ + "gene_synonym", + "ECK2243" + ], + [ + "gene_synonym", + "EcoGene:EG14088" + ], + [ + "gene_synonym", + "GI:90111407" + ], + [ + "gene_synonym", + "GeneID:946739" + ], + [ + "gene_synonym", + "JW5371" + ], + [ + "gene_synonym", + "NP_416753.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76471" + ], + [ + "gene_synonym", + "b2250" + ], + [ + "gene_synonym", + "yfaZ" + ] + ], + "dna_sequence": "ATGAAAAAAATTGCGCTAGCAGGTCTGGCCGGAATGCTGTTGGTTTCTGCATCGGTCAATGCAATGAGCATCAGCGGTCAGGCGGGTAAAGAATACACCAATATTGGTGTCGGTTTTGGGACTGAAACGACGGGCCTGGCGTTAAGCGGTAACTGGACACATAACGACGACGACGGTGATGTCGCTGGCGTGGGGCTGGGGTTGAATCTGCCTCTCGGGCCGTTAATGGCGACCGTTGGCGGAAAAGGCGTTTACACCAACCCGAATTACGGCGATGAAGGTTATGCCGCAGCGGTAGGAGGTGGTTTGCAGTGGAAAATTGGCAACAGCTTCCGTTTGTTTGGCGAGTATTACTACTCTCCGGATTCGCTCTCCAGCGGTATTCAAAGTTATGAAGAAGCGAATGCTGGCGCGCGTTACACCATTATGCGTCCAGTCAGTATTGAGGCGGGTTATCGCTACCTGAATCTGTCGGGTAAAGACGGTAACCGCGACAACGCCGTGGCTGACGGCCCGTATGTTGGGGTTAACGCCAGTTTCTGA", + "dna_sequence_length": 543, + "functions": [ + "outer membrane protein, putative porin" + ], + "id": "CDS_2234", + "location": [ + [ + "NC_000913", + 2364275, + "-", + 543 + ] + ], + "md5": "bcc9ad481fdedfbd0b074a5708882991", + "parent_gene": "", + "protein_md5": "022b1be73d6845cd620a08416a36917c", + "protein_translation": "MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTETTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007449" + ], + [ + "gene_synonym", + "ECK2244" + ], + [ + "gene_synonym", + "EcoGene:EG13275" + ], + [ + "gene_synonym", + "GI:16130186" + ], + [ + "gene_synonym", + "GeneID:946740" + ], + [ + "gene_synonym", + "JW2245" + ], + [ + "gene_synonym", + "NP_416754.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52006" + ], + [ + "gene_synonym", + "b2251" + ], + [ + "gene_synonym", + "nudI" + ], + [ + "gene_synonym", + "yfaO" + ] + ], + "dna_sequence": "GTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAA", + "dna_sequence_length": 426, + "functions": [ + "nucleoside triphosphatase" + ], + "id": "CDS_2235", + "location": [ + [ + "NC_000913", + 2364554, + "+", + 426 + ] + ], + "md5": "ad093500e16dec8d41b7fdb5a1806e2f", + "parent_gene": "", + "protein_md5": "8d1d62fcb652c6ce521596b1870699ee", + "protein_translation": "MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWAISGGGVEPGERIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLKGLL", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007451" + ], + [ + "gene_synonym", + "ECK2245" + ], + [ + "gene_synonym", + "EcoGene:EG13155" + ], + [ + "gene_synonym", + "GI:16130187" + ], + [ + "gene_synonym", + "GeneID:944945" + ], + [ + "gene_synonym", + "JW2246" + ], + [ + "gene_synonym", + "NP_416755.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45565" + ], + [ + "gene_synonym", + "ais" + ], + [ + "gene_synonym", + "b2252" + ], + [ + "gene_synonym", + "pagH" + ], + [ + "gene_synonym", + "pmrG" + ] + ], + "dna_sequence": "GTGTTAGCTTTTTGCCGCTCTTCGTTGAAGTCAAAAAAATATATCATCATTTTACTGGCGCTCGCTGCAATTGCCGGACTGGGTACTCATGCCGCCTGGAGTAGCAATGGTTTGCCACGTATCGACAATAAAACACTGGCCAGACTGGCACAGCAGCACCCGGTTGTCGTTTTGTTTCGTCATGCTGAACGTTGCGACCGTTCAACCAATCAATGCTTGTCAGATAAAACAGGTATTACGGTTAAAGGTACCCAGGATGCCCGTGAACTGGGCAACGCTTTTAGTGCTGATATCCCTGATTTCGATCTTTATTCCAGTAATACCGTCCGGACCATTCAGTCGGCTACCTGGTTTTCAGCGGGTAAAAAATTGACGGTAGATAAACGACTTCTTCAGTGCGGTAATGAGATTTATAGTGCAATTAAGGACTTACAAAGCAAAGCGCCTGATAAAAATATCGTTATTTTCACCCATAATCATTGCCTGACATATATTGCTAAAGATAAGCGTGACGCGACATTTAAACCTGATTATCTGGATGGTTTAGTCATGCATGTGGAAAAAGGCAAAGTTTATCTGGATGGGGAATTCGTTAACCACTAA", + "dna_sequence_length": 603, + "functions": [ + "putative LPS core heptose(II)-phosphate phosphatase" + ], + "id": "CDS_2236", + "location": [ + [ + "NC_000913", + 2365620, + "-", + 603 + ] + ], + "md5": "d257d4435bdaf37209e5f22c31ddf46e", + "parent_gene": "", + "protein_md5": "4bb4f9c190ba0b1d8f49fc3ca4ee6c46", + "protein_translation": "MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007456" + ], + [ + "gene_synonym", + "ECK2246" + ], + [ + "gene_synonym", + "EcoGene:EG14089" + ], + [ + "gene_synonym", + "GI:145698288" + ], + [ + "gene_synonym", + "GeneID:947375" + ], + [ + "gene_synonym", + "JW5372" + ], + [ + "gene_synonym", + "NP_416756.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77690" + ], + [ + "gene_synonym", + "arnB" + ], + [ + "gene_synonym", + "b2253" + ], + [ + "gene_synonym", + "pgbP1" + ], + [ + "gene_synonym", + "pmrH" + ], + [ + "gene_synonym", + "yfbE" + ] + ], + "dna_sequence": "ATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTGGATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTACGCCTTCCCTGACCTGGGTTTCAACCCTCAATATGATTTCCTTGTTGGGTGCAACGCCGGTAATGGTGGATGTCGACCGCGATACGCTGATGGTCACGCCTGAAGCTATCGAGTCAGCCATTACGCCACGCACTAAAGCCATCATTCCGGTGCATTATGCCGGTGCGCCAGCAGATATTGACGCCATTCGCGCCATTGGCGAACGTTACGGCATCGCAGTTATCGAAGATGCTGCCCATGCCGTCGGTACGTATTACAAAGGGCGACATATTGGCGCAAAAGGTACCGCTATTTTTTCATTTCATGCCATTAAAAATATTACCTGTGCTGAAGGTGGCCTGATTGTAACTGATAATGAAAACCTTGCCCGCCAGCTACGGATGCTGAAATTTCACGGTCTGGGTGTCGATGCCTATGACAGACAAACCTGGGGCCGTGCACCGCAGGCTGAAGTCTTAACACCGGGCTATAAGTACAATCTGACCGATATTAACGCCGCGATTGCCCTGACACAGTTAGTCAAATTAGAGCACCTCAACACCCGTCGGCGCGAAATTGCCCAGCAATATCAGCAAGCACTGGCAGCTCTCCCCTTTCAGCCATTAAGCCTTCCCGCCTGGCCGCACGTTCACGCCTGGCATCTGTTTATTATTCGTGTCGATGAACAACGTTGTGGTATCAGTCGCGATGCGTTGATGGAAGCGTTAAAAGAAAGAGGCATTGGTACCGGGTTACATTTCCGCGCCGCTCACACACAAAAATATTATCGCGAGCGTTTTCCCACGCTGTCGTTACCGAATACCGAATGGAATAGCGAACGCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAA", + "dna_sequence_length": 1140, + "functions": [ + "uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent" + ], + "id": "CDS_2237", + "location": [ + [ + "NC_000913", + 2365928, + "+", + 1140 + ] + ], + "md5": "6bd96e70a6bee9f4df0fc42b0fc03c7d", + "parent_gene": "", + "protein_md5": "65b55bf64082c8af9e8c57b2ef97b800", + "protein_translation": "MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007458" + ], + [ + "gene_synonym", + "ECK2247" + ], + [ + "gene_synonym", + "EcoGene:EG14090" + ], + [ + "gene_synonym", + "GI:16130189" + ], + [ + "gene_synonym", + "GeneID:945275" + ], + [ + "gene_synonym", + "JW2248" + ], + [ + "gene_synonym", + "NP_416757.1" + ], + [ + "gene_synonym", + "ORF2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77757" + ], + [ + "gene_synonym", + "arnC" + ], + [ + "gene_synonym", + "b2254" + ], + [ + "gene_synonym", + "pmrF" + ], + [ + "gene_synonym", + "yfbF" + ] + ], + "dna_sequence": "ATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAACGCCGCTACGTATGCTGAGTCTGCTCGGCAGCATTATTGCGATTGGAGGTTTTAGCATTGCGGTGCTGCTGGTGATTTTACGCCTGACCTTCGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAA", + "dna_sequence_length": 969, + "functions": [ + "undecaprenyl phosphate-L-Ara4FN transferase" + ], + "id": "CDS_2238", + "location": [ + [ + "NC_000913", + 2367071, + "+", + 969 + ] + ], + "md5": "6e693673769e0871177af2e2fea63c78", + "parent_gene": "", + "protein_md5": "ca3c13477a20e356d3ec6c4cca81c8bc", + "protein_translation": "MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE", + "protein_translation_length": 322, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007460" + ], + [ + "gene_synonym", + "ECK2248" + ], + [ + "gene_synonym", + "EcoGene:EG14091" + ], + [ + "gene_synonym", + "GI:16130190" + ], + [ + "gene_synonym", + "GeneID:947683" + ], + [ + "gene_synonym", + "JW2249" + ], + [ + "gene_synonym", + "NP_416758.1" + ], + [ + "gene_synonym", + "SAF" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77398" + ], + [ + "gene_synonym", + "arnA" + ], + [ + "gene_synonym", + "b2255" + ], + [ + "gene_synonym", + "pbgP3" + ], + [ + "gene_synonym", + "pmrI" + ], + [ + "gene_synonym", + "yfbG" + ] + ], + "dna_sequence": "ATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGTATTGAAGCCCTGCTGGCTGCCGGTTACGAAATTAGCGCCATTTTTACCCATACTGATAATCCCGGTGAAAAAGCCTTTTATGGTTCGGTGGCTCGTCTGGCGGCGGAAAGAGGCATTCCGGTTTATGCGCCGGATAACGTTAATCATCCGCTGTGGGTGGAACGCATTGCCCAACTGTCGCCAGATGTGATTTTCTCTTTTTATTATCGCCATCTTATTTACGACGAAATTTTGCAGCTCGCTCCCGCAGGTGCATTTAATCTGCATGGTTCGCTGTTACCAAAATATCGTGGTCGCGCGCCGCTGAACTGGGTGCTGGTCAACGGTGAAACGGAAACTGGCGTTACATTGCACCGAATGGTGAAACGTGCCGATGCCGGGGCCATTGTGGCGCAACTGCGCATTGCCATTGCGCCAGACGATATCGCTATTACGCTGCATCATAAATTGTGCCATGCCGCGCGCCAGCTACTGGAACAGACATTACCCGCCATTAAACACGGTAATATTCTGGAAATCGCCCAGCGCGAAAACGAAGCCACCTGTTTTGGTCGCAGAACGCCGGATGACAGTTTCCTTGAATGGCATAAACCGGCATCCGTACTGCACAACATGGTACGTGCCGTTGCCGATCCGTGGCCGGGTGCCTTCAGCTATGTTGGCAATCAGAAATTCACCGTCTGGTCGTCGCGTGTTCATCCTCATGCCAGCAAAGCACAGCCGGGGAGCGTGATTTCTGTTGCGCCACTGCTGATTGCCTGTGGCGATGGCGCGCTGGAAATCGTCACCGGACAGGCGGGCGACGGCATTACTATGCAGGGCTCGCAATTAGCGCAGACGCTGGGCCTGGTGCAAGGTTCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACGGTCTGGATATTGGCAGCGATGCGATAAGCCGTTTTCTGAATCATCCGCATTTTCACTTTGTTGAAGGCGATATCAGTATTCATTCCGAATGGATTGAGTATCATGTCAAAAAATGTGATGTCGTCTTGCCGCTGGTGGCGATAGCCACGCCGATTGAATATACCCGCAACCCGCTGCGCGTATTTGAACTCGATTTTGAAGAGAATCTGCGCATTATCCGCTACTGCGTGAAGTACCGTAAGCGAATCATCTTCCCGTCAACTTCAGAAGTTTATGGGATGTGTAGCGATAAATACTTCGATGAGGACCATTCTAATTTAATCGTCGGCCCGGTGAATAAACCACGCTGGATTTATTCGGTATCAAAACAATTACTTGATCGGGTGATCTGGGCCTATGGCGAAAAAGAGGGTTTACAGTTCACCCTCTTCCGCCCGTTTAACTGGATGGGACCACGACTGGATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATGGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGAAAAACATCCGCTGCGCCATCATTTCCCACCGTTTGCGGGCTTTCGCGTTGTCGAAAGTAGCAGCTACTACGGCAAAGGATATCAGGACGTAGAGCATCGTAAACCGAGCATCCGCAATGCCCACCGCTGCCTGGACTGGGAGCCGAAAATTGATATGCAGGAAACCATCGACGAAACGCTGGATTTCTTCCTGCGCACCGTTGATCTTACGGATAAACCATCATGA", + "dna_sequence_length": 1983, + "functions": [ + "fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase" + ], + "id": "CDS_2239", + "location": [ + [ + "NC_000913", + 2368039, + "+", + 1983 + ] + ], + "md5": "8e84184263df6819bcf77632b344e4cb", + "parent_gene": "", + "protein_md5": "01fa82bf61c0f15e0e2df18b7115ea2a", + "protein_translation": "MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS", + "protein_translation_length": 660, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007462" + ], + [ + "gene_synonym", + "ECK2249" + ], + [ + "gene_synonym", + "EcoGene:EG14092" + ], + [ + "gene_synonym", + "GI:16130191" + ], + [ + "gene_synonym", + "GeneID:945334" + ], + [ + "gene_synonym", + "JW2250" + ], + [ + "gene_synonym", + "NP_416759.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76472" + ], + [ + "gene_synonym", + "arnD" + ], + [ + "gene_synonym", + "b2256" + ], + [ + "gene_synonym", + "pbgP4" + ], + [ + "gene_synonym", + "pmrJ" + ], + [ + "gene_synonym", + "yfbH" + ] + ], + "dna_sequence": "ATGACCAAAGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCCAGGTAAAGAGATTGGTCATGCCAATGCCGATATCATTCGTGAAGCGGCTAAACATCACGAAGTCGGCCTGCACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAAAGAAGCGTTCCATTTGCGCTACAACAGCGATTGTCGTGGGGCCATGCCGTTCCGTCCATTGCTCGAATCAGGAAACCCTGGCACTGCGCAAATTCCGGTGACCTTACCCACCTGGGATGAAGTGATTGGTCGGGATGTGAAAGCAGAAGATTTTAACGGTTGGTTACTCAACCGCATCCTGCGAGATAAAGGCACGCCGGTTTATACCATTCATGCAGAAGTTGAAGGCTGCGCTTATCAGCATAATTTTGTGGATCTCCTCAAACGCGCAGCTCAGGAAGGCGTGACATTTTGCCCTTTAAGCGAACTGTTATCAGAGACGTTGCCGCTCGGACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGA", + "dna_sequence_length": 891, + "functions": [ + "undecaprenyl phosphate-alpha-L-ara4FN deformylase" + ], + "id": "CDS_2240", + "location": [ + [ + "NC_000913", + 2370018, + "+", + 891 + ] + ], + "md5": "c23dfeb2d8d01a9a6bfe4febf303748b", + "parent_gene": "", + "protein_md5": "00eab6701f3f824f58a08890feb2529e", + "protein_translation": "MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007464" + ], + [ + "gene_synonym", + "ECK2250" + ], + [ + "gene_synonym", + "EcoGene:EG14093" + ], + [ + "gene_synonym", + "GI:16130192" + ], + [ + "gene_synonym", + "GeneID:947297" + ], + [ + "gene_synonym", + "JW2251" + ], + [ + "gene_synonym", + "NP_416760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76473" + ], + [ + "gene_synonym", + "arnT" + ], + [ + "gene_synonym", + "b2257" + ], + [ + "gene_synonym", + "pbgE1" + ], + [ + "gene_synonym", + "pmrK" + ], + [ + "gene_synonym", + "pqaB" + ], + [ + "gene_synonym", + "yfbI" + ] + ], + "dna_sequence": "ATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGTTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCGGATACTGGATTAACAGCATTGGGCAATGGCTATTTGGCGCGAATAACTTTGGTGTGCGGGCAGGCGTTATCTTTGCGACCCTGTTAACTGCCGCGCTGGTGACCTGGTTTACTCTGCGCTTATGGCGCGATAAACGTCTGGCTCTACTCGCCACAGTAATTTATCTCTCATTGTTTATTGTCTATGCCATCGGCACTTATGCCGTGCTCGATCCGTTTATTGCATTCTGGCTGGTGGCGGGAATGTGCAGCTTCTGGCTGGCAATGCAGGCACAGACGTGGAAAGGCAAAAGCGCAGGATTTTTACTGCTGGGAATCACCTGCGGCATGGGGGTGATGACCAAAGGTTTTCTCGCCCTTGCCGTGCCGGTATTAAGCGTGCTGCCATGGGTAGCGACGCAAAAACGCTGGAAAGATCTCTTTATTTACGGCTGGCTGGCGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCATTCCGCAACCGTCTATTTGTTGAGCTGGACGATAATGCCGCTGCTGTTTTTCTCCGTCGCTAAAGGTAAATTGCCCACCTATATTCTTTCCTGCTTTGCATCTCTGGCAATGCTGATGGCGCATTACGCTTTGCTGGCAGCAAAAAATAATCCTCTGGCGCTGCGGATTAATGGCTGGATTAACATCGCTTTTGGCGTCACTGGCATTATTGCCACATTTGTGGTCTCCCCGTGGGGACCAATGAACACGCCGGTGTGGCAAACCTTCGAGAGCTATAAAGTCTTTTGTGCCTGGTCGATTTTTTCGCTATGGGCATTTTTCGGCTGGTACACCTTAACAAACGTCGAAAAGACCTGGCCTTTTGCCGCGCTTTGCCCGCTGGGGCTGGCGTTGCTGGTAGGATTTTCAATTCCTGACAGAGTTATGGAAGGAAAACATCCGCAATTTTTTGTCGAGATGACACAAGAATCACTTCAGCCAAGCCGCTATATTCTTACTGATAGCGTCGGTGTTGCCGCAGGTCTGGCATGGAGCCTGCAACGCGATGACATCATCATGTATCGCCAGACAGGTGAGTTGAAATACGGCCTTAATTATCCGGATGCGAAAGGGAGATTTGTCAGCGGTGATGAGTTCGCAAACTGGCTTAATCAACATCGTCAGGAGGGGATTATTACTCTCGTGCTTTCGGTTGACCGCGATGAAGATATCAACAGTCTCGCCATTCCGCCCGCAGATGCCATCGATCGTCAGGAGCGTCTGGTGCTGATTCAGTATCGTCCCAAATGA", + "dna_sequence_length": 1653, + "functions": [ + "4-amino-4-deoxy-L-arabinose transferase" + ], + "id": "CDS_2241", + "location": [ + [ + "NC_000913", + 2370908, + "+", + 1653 + ] + ], + "md5": "2d518380e941b6066bdccb77a00789e4", + "parent_gene": "", + "protein_md5": "fc4161486748f714f30626d6eb08c7ec", + "protein_translation": "MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFTLRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKGKSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLPWGLAIAQREPNFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLPGALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLWAFFGWYTLTNVEKTWPFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSRYILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHRQEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK", + "protein_translation_length": 550, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285065" + ], + [ + "gene_synonym", + "ECK2251" + ], + [ + "gene_synonym", + "EcoGene:EG14344" + ], + [ + "gene_synonym", + "GI:94541119" + ], + [ + "gene_synonym", + "GeneID:1450282" + ], + [ + "gene_synonym", + "JW2252" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47377" + ], + [ + "gene_synonym", + "YP_588462.1" + ], + [ + "gene_synonym", + "arnE" + ], + [ + "gene_synonym", + "b4544" + ], + [ + "gene_synonym", + "pbgE2" + ], + [ + "gene_synonym", + "pmrL" + ], + [ + "gene_synonym", + "yfbW" + ] + ], + "dna_sequence": "ATGATCTGGCTAACATTAGTCTTTGCCAGCTTGCTTAGCGTTGCCGGGCAGTTGTGTCAGAAACAGGCAACCTGCTTTGTGGCGATAAACAAACGGCGCAAACATATCGTGCTGTGGCTGGGACTGGCGCTGGCTTGTCTTGGTCTTGCCATGGTGCTCTGGCTGCTGGTCTTGCAGAACGTACCGGTAGGCATTGCTTACCCGATGTTAAGTCTGAATTTTGTCTGGGTGACGCTGGCTGCAGTAAAACTGTGGCACGAACCGGTATCGCCGCGTCACTGGTGTGGGGTGGCGTTCATTATTGGCGGCATTGTGATCCTCGGGAGTACGGTGTAA", + "dna_sequence_length": 336, + "functions": [ + "undecaprenyl phosphate-alpha-L-ara4N exporter", + "flippase ArnEF subunit" + ], + "id": "CDS_2242", + "location": [ + [ + "NC_000913", + 2372557, + "+", + 336 + ] + ], + "md5": "ab44810610228394d7da77f0f73299b0", + "parent_gene": "", + "protein_md5": "2ceb787818d4a72477ec32d5f728d3fb", + "protein_translation": "MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGSTV", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007466" + ], + [ + "gene_synonym", + "ECK2252" + ], + [ + "gene_synonym", + "EcoGene:EG14094" + ], + [ + "gene_synonym", + "GI:90111409" + ], + [ + "gene_synonym", + "GeneID:945344" + ], + [ + "gene_synonym", + "JW5373" + ], + [ + "gene_synonym", + "NP_416761.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76474" + ], + [ + "gene_synonym", + "arnF" + ], + [ + "gene_synonym", + "b2258" + ], + [ + "gene_synonym", + "pbgE3" + ], + [ + "gene_synonym", + "pmrM" + ], + [ + "gene_synonym", + "yfbJ" + ] + ], + "dna_sequence": "ATGGGCCTGATGTGGGGATTATTCAGCGTCATTATTGCCTCAGTTGCGCAATTAAGCCTGGGTTTTGCGGCGAGTCATCTGCCGCCGATGACGCACTTATGGGATTTTATCGCGGCTCTGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGA", + "dna_sequence_length": 387, + "functions": [ + "undecaprenyl phosphate-alpha-L-ara4N exporter", + "flippase ArnEF subunit" + ], + "id": "CDS_2243", + "location": [ + [ + "NC_000913", + 2372892, + "+", + 387 + ] + ], + "md5": "22ae9af608f2953e6e1d82380287b7ea", + "parent_gene": "", + "protein_md5": "b8269084c70eea2a37aaa7afde26adf0", + "protein_translation": "MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007468" + ], + [ + "gene_synonym", + "ECK2253" + ], + [ + "gene_synonym", + "EcoGene:EG12671" + ], + [ + "gene_synonym", + "GI:90111410" + ], + [ + "gene_synonym", + "GeneID:945130" + ], + [ + "gene_synonym", + "JW2254" + ], + [ + "gene_synonym", + "NP_416762.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37590" + ], + [ + "gene_synonym", + "b2259" + ], + [ + "gene_synonym", + "pmrD" + ] + ], + "dna_sequence": "ATGGAATGGCTGGTCAAAAAATCGTGCTGCAATAAACAAGATAACAGACATGTACTTATGCTCTGCGATGCTGGCGGCGCGATAAAAATGATCGCCGAAGTGAAGAGTGACTTCGCCGTGAAAGTGGGGGATTTACTCTCGCCTTTGCAGAATGCGCTTTATTGTATTAATCGTGAAAAGCTGCATACGGTGAAAGTCCTCTCGGCAAGCAGTTATAGCCCCGATGAGTGGGAACGGCAGTGTAAAGTGGCAGGGAAAACTCAGTAA", + "dna_sequence_length": 267, + "functions": [ + "inactive two-component system connector protein" + ], + "id": "CDS_2244", + "location": [ + [ + "NC_000913", + 2373538, + "-", + 267 + ] + ], + "md5": "a8f601af4c17a2b6c8a53b5bfdf7a3e3", + "parent_gene": "", + "protein_md5": "22f73f32dce657aba511b0ead2d927a8", + "protein_translation": "MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007471" + ], + [ + "gene_synonym", + "ECK2254" + ], + [ + "gene_synonym", + "EcoGene:EG12437" + ], + [ + "gene_synonym", + "GI:16130195" + ], + [ + "gene_synonym", + "GeneID:946741" + ], + [ + "gene_synonym", + "JW2255" + ], + [ + "gene_synonym", + "NP_416763.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37353" + ], + [ + "gene_synonym", + "b2260" + ], + [ + "gene_synonym", + "menE" + ] + ], + "dna_sequence": "ATGATCTTCTCTGACTGGCCGTGGCGTCACTGGCGGCAAGTGCGGGGAGAAACCATCGCCTTACGTCTTAATGACGAGCAACTCAACTGGCGCGAGCTTTGTGCTCGCGTCGATGAATTAGCCTCCGGATTTGCGGTGCAGGGGGTGGTTGAGGGCAGCGGCGTGATGTTGCGGGCGTGGAATACGCCGCAAACGCTGCTCGCCTGGCTGGCGTTACTGCAATGCGGGGCGCGGGTGTTGCCCGTGAACCCTCAGCTGCCGCAACCGTTGCTTGAAGAATTGCTGCCCAATCTGACGCTGCAATTTGCTCTGGTGCCGGATGGGGAAAACACGTTTCCGGCATTAACGTCGCTGCACATTCAGCTGGTTGAAGGCGCACATGCCGCTACGTGGCAGCCGACGCGTCTGTGCTCAATGACGTTGACCTCGGGTTCTACCGGTTTGCCGAAAGCCGCTGTCCATACTTATCAGGCCCATCTTGCCAGTGCGCAAGGTGTGTTATCGCTGATTCCGTTTGGCGATCACGATGATTGGTTGCTCTCTTTACCGCTGTTTCACGTCTCCGGTCAGGGAATTATGTGGCGCTGGTTATACGCTGGTGCGCGGATGACGGTACGTGATAAACAGCCATTGGAGCAAATGCTGGCAGGCTGTACTCACGCTTCACTGGTGCCAACACAACTCTGGCGTTTGCTGGTTAACCGTAGTTCCGTTTCCCTGAAAGCGGTGTTACTTGGCGGCGCGGCTATCCCGGTCGAGTTGACGGAACAGGCGCGCGAGCAGGGGATTCGTTGCTTTTGCGGCTATGGTCTGACCGAGTTTGCCTCCACGGTGTGTGCGAAAGAAGCCGACGGCCTGGCAGACGTTGGTTCGCCGCTGCCGGGTCGGGAAGTGAAAATCGTTAATAATGAAGTGTGGCTGCGGGCTGCCAGTATGGCAGAAGGTTACTGGCGTAACGGGCAACTGGTTTCACTGGTTAATGACGAAGGCTGGTACGCTACGCGCGATCGCGGTGAGATGCATAATGGCAAGCTGACCATTGTCGGACGTTTAGACAATCTATTCTTCAGTGGCGGAGAGGGTATTCAGCCGGAAGAAGTCGAGCGCGTAATTGCTGCACATCCTGCGGTTTTGCAGGTGTTTATCGTCCCCGTTGCCGACAAGGAGTTTGGTCATCGACCGGTGGCGGTGATGGAGTATGACCACGAGAGCGTTGATCTTAGTGAATGGGTGAAAGATAAGCTGGCCCGTTTTCAACAACCGGTGCGCTGGCTAACTCTGCCGCCGGAGCTGAAAAACGGCGGTATTAAAATTTCACGTCAGGCGCTAAAAGAGTGGGTGCAACGTCAGCAATAA", + "dna_sequence_length": 1356, + "functions": [ + "O-succinylbenzoate-CoA ligase" + ], + "id": "CDS_2245", + "location": [ + [ + "NC_000913", + 2375003, + "-", + 1356 + ] + ], + "md5": "738c0d11bf8beb4ffb2f46335881f561", + "parent_gene": "", + "protein_md5": "e2cadeb535c1b180382eb1e160a83402", + "protein_translation": "MIFSDWPWRHWRQVRGETIALRLNDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ", + "protein_translation_length": 451, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007473" + ], + [ + "gene_synonym", + "ECK2255" + ], + [ + "gene_synonym", + "EcoGene:EG11532" + ], + [ + "gene_synonym", + "GI:16130196" + ], + [ + "gene_synonym", + "GeneID:946734" + ], + [ + "gene_synonym", + "JW2256" + ], + [ + "gene_synonym", + "NP_416764.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29208" + ], + [ + "gene_synonym", + "b2261" + ], + [ + "gene_synonym", + "menC" + ] + ], + "dna_sequence": "ATGCGTAGCGCGCAGGTATACCGCTGGCAGATCCCCATGGACGCGGGGGTGGTTCTGCGCGACAGGCGGTTAAAAACCCGCGACGGGCTGTATGTTTGCCTGCGTGAAGGCGAGCGCGAAGGGTGGGGGGAGATCTCCCCACTGCCGGGCTTCAGTCAGGAAACCTGGGAAGAGGCGCAAAGTGTGCTGCTTGCCTGGGTAAATAACTGGCTGGCAGGCGATTGCGAGCTACCGCAGATGCCTTCCGTGGCCTTTGGCGTAAGCTGTGCATTGGCAGAACTGACAGATACGTTGCCGCAAGCAGCCAACTACCGTGCGGCACCGCTGTGTAATGGCGATCCGGACGATCTGATCCTCAAACTTGCAGATATGCCAGGCGAGAAAGTGGCGAAGGTCAAAGTGGGATTGTACGAAGCGGTGCGCGACGGCATGGTGGTGAATCTGTTGCTGGAGGCAATTCCGGATCTGCATTTGCGTCTTGACGCAAATCGCGCCTGGACACCGCTGAAAGGTCAGCAGTTTGCCAAATACGTTAACCCGGATTATCGCGACCGCATCGCGTTTCTCGAAGAGCCGTGCAAAACCCGCGATGATTCGCGAGCGTTTGCCCGTGAAACCGGCATTGCCATTGCCTGGGATGAAAGCCTGCGCGAGCCGGATTTTGCCTTTGTGGCTGAAGAGGGCGTGCGCGCGGTAGTTATCAAACCCACGCTCACGGGCAGTCTGGAAAAAGTACGCGAGCAGGTACAGGCGGCGCACGCGCTGGGGCTGACGGCGGTGATCAGTTCTTCCATTGAATCGAGCTTAGGCTTAACGCAACTGGCGCGGATTGCCGCCTGGTTAACGCCGGACACCATTCCAGGGCTGGACACGCTGGATCTGATGCAGGCGCAGCAGGTACGTCGCTGGCCGGGTAGCACGCTGCCTGTCGTGGAAGTTGATGCACTGGAGCGGTTGTTATGA", + "dna_sequence_length": 963, + "functions": [ + "O-succinylbenzoyl-CoA synthase" + ], + "id": "CDS_2246", + "location": [ + [ + "NC_000913", + 2375962, + "-", + 963 + ] + ], + "md5": "e90c5d388f4a44e4960b8900b85b8e95", + "parent_gene": "", + "protein_md5": "1fe0536e9c677f73701f2ab2f32fd868", + "protein_translation": "MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELTDTLPQAANYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007476" + ], + [ + "gene_synonym", + "ECK2256" + ], + [ + "gene_synonym", + "EcoGene:EG11368" + ], + [ + "gene_synonym", + "GI:16130197" + ], + [ + "gene_synonym", + "GeneID:946747" + ], + [ + "gene_synonym", + "JW2257" + ], + [ + "gene_synonym", + "NP_416765.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU0" + ], + [ + "gene_synonym", + "b2262" + ], + [ + "gene_synonym", + "menB" + ] + ], + "dna_sequence": "ATGATTTATCCTGATGAAGCAATGCTTTACGCACCGGTTGAATGGCACGACTGCTCCGAAGGTTTCGAGGACATTCGTTATGAAAAATCCACCGACGGTATCGCAAAAATCACCATTAATCGTCCGCAGGTGCGCAATGCCTTCCGTCCTCTGACGGTAAAAGAGATGATCCAGGCGCTGGCAGATGCGCGTTATGACGACAACATCGGCGTGATCATTCTGACTGGTGCAGGCGATAAAGCGTTCTGCTCCGGTGGTGACCAGAAAGTGCGTGGTGATTACGGCGGCTATAAAGATGATTCCGGCGTACATCACCTGAATGTGCTGGACTTCCAGCGTCAGATCCGTACCTGTCCGAAACCGGTTGTCGCGATGGTGGCTGGCTACTCCATCGGCGGCGGTCACGTTCTGCACATGATGTGCGACCTGACTATCGCGGCAGATAATGCCATCTTCGGTCAGACTGGCCCGAAAGTCGGTTCCTTCGACGGCGGCTGGGGCGCTTCCTACATGGCTCGCATCGTCGGGCAGAAAAAAGCGCGTGAAATCTGGTTCCTGTGCCGTCAGTACGACGCAAAACAGGCGCTGGATATGGGCCTTGTGAACACCGTGGTACCGCTGGCGGATCTGGAAAAAGAAACCGTCCGTTGGTGCCGCGAAATGCTGCAAAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAACGTCAGCCTGACTTCAGCAAATTCAAACGGAATCCGTAA", + "dna_sequence_length": 858, + "functions": [ + "dihydroxynaphthoic acid synthetase" + ], + "id": "CDS_2247", + "location": [ + [ + "NC_000913", + 2376819, + "-", + 858 + ] + ], + "md5": "93d3fbda9664c60a0e2725ff5de0dd6a", + "parent_gene": "", + "protein_md5": "fee40d4ca185e3eaf50add88f5e77e13", + "protein_translation": "MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007478" + ], + [ + "gene_synonym", + "ECK2257" + ], + [ + "gene_synonym", + "EcoGene:EG12438" + ], + [ + "gene_synonym", + "GI:16130198" + ], + [ + "gene_synonym", + "GeneID:946736" + ], + [ + "gene_synonym", + "JW2258" + ], + [ + "gene_synonym", + "NP_416766.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37355" + ], + [ + "gene_synonym", + "b2263" + ], + [ + "gene_synonym", + "menH" + ], + [ + "gene_synonym", + "yfbB" + ] + ], + "dna_sequence": "ATGATCCTGCACGCGCAGGCAAAACACGGAAAACCAGGTTTACCCTGGCTGGTGTTTTTGCACGGTTTTTCCGGCGATTGCCACGAATGGCAAGAAGTGGGCGAGGCGTTTGCCGACTACTCACGGTTGTATGTTGATCTCCCAGGTCACGGTGGTTCGGCGGCGATTAGCGTCGATGGATTTGATGATGTCACCGACTTACTGCGTAAAACCTTGGTTAGTTACAACATCCTTGACTTCTGGCTGGTGGGGTACTCGCTTGGTGGACGGGTGGCGATGATGGCGGCTTGCCAGGGGCTGGCGGGGCTTTGTGGGGTTATTGTCGAAGGCGGGCATCCGGGGCTGCAAAATGCTGAACAACGTGCGGAACGTCAGCGTTCCGATCGCCAATGGGTGCAGCGTTTTCTCACAGAACCGTTAACGGCGGTATTTGCCGACTGGTATCAACAGCCTGTTTTTGCCTCACTCAATGACGATCAACGCCGGGAGCTGGTGGCGCTGCGCAGCAACAATAATGGCGCAACGCTTGCCGCCATGCTGGAGGCGACTTCTCTCGCCGTCCAGCCTGATTTACGTGCTAACCTTAGCGCCCGCACATTTGCGTTTTATTATTTATGTGGTGAACGTGACAGCAAATTCCGCGCCCTGGCGGCGGAACTGGCTGCCGACTGCCATGTCATTCCTCGCGCCGGACATAACGCGCATCGGGAAAATCCCGCTGGCGTAATCGCAAGTCTGGCGCAGATCTTGCGTTTCTGA", + "dna_sequence_length": 759, + "functions": [ + "2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase" + ], + "id": "CDS_2248", + "location": [ + [ + "NC_000913", + 2377592, + "-", + 759 + ] + ], + "md5": "6cad3a54d0ad555cc5e2f03a525e021c", + "parent_gene": "", + "protein_md5": "b2e52db3e32ed6c1dfc3a976d3e128af", + "protein_translation": "MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPAGVIASLAQILRF", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007482" + ], + [ + "gene_synonym", + "ECK2258" + ], + [ + "gene_synonym", + "EcoGene:EG10579" + ], + [ + "gene_synonym", + "GI:16130199" + ], + [ + "gene_synonym", + "GeneID:946720" + ], + [ + "gene_synonym", + "JW5374" + ], + [ + "gene_synonym", + "NP_416767.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17109" + ], + [ + "gene_synonym", + "b2264" + ], + [ + "gene_synonym", + "menD" + ] + ], + "dna_sequence": "ATGTCAGTAAGCGCATTTAACCGACGCTGGGCGGCGGTCATTCTGGAAGCATTAACGCGTCACGGCGTCAGACACATCTGTATCGCCCCAGGCTCGCGTTCTACACCGTTAACGTTAGCGGCGGCGGAGAATTCCGCATTCATTCACCACACCCATTTCGATGAGCGTGGGTTGGGGCATCTGGCGCTGGGGCTGGCGAAAGTCAGCAAGCAGCCGGTGGCGGTGATTGTGACCTCCGGCACGGCGGTGGCAAATCTCTATCCGGCACTGATTGAAGCCGGGTTAACCGGAGAAAAACTGATTCTCTTAACCGCCGATCGCCCGCCGGAGCTAATTGACTGCGGCGCGAATCAGGCAATTCGCCAGCCGGGAATGTTCGCCTCTCACCCCACGCACAGTATTTCATTGCCGCGCCCGACCCAGGATATCCCCGCACGTTGGCTGGTTTCTACCATCGACCACGCTCTCGGTACGCTTCATGCGGGGGGAGTCCATATCAACTGCCCGTTTGCTGAACCGCTGTATGGCGAAATGGACGATACCGGGCTTAGCTGGCAACAGCGTCTGGGTGACTGGTGGCAGGACGACAAACCGTGGCTGCGTGAAGCGCCTCGTCTGGAAAGTGAAAAACAGCGCGACTGGTTCTTCTGGCGACAAAAGCGCGGCGTGGTGGTTGCCGGGCGCATGAGTGCGGAAGAGGGCAAAAAAGTTGCCCTGTGGGCGCAAACTCTTGGCTGGCCGCTGATTGGCGATGTGCTGTCACAAACCGGGCAGCCGCTGCCGTGTGCCGATCTTTGGTTAGGCAATGCCAAAGCGACCAGCGAGCTGCAGCAGGCGCAAATTGTGGTGCAACTGGGAAGCAGCCTGACGGGGAAACGGCTCCTGCAATGGCAGGCAAGCTGTGAACCAGAAGAGTACTGGATTGTTGATGACATTGAAGGGCGACTTGATCCGGCACACCATCGCGGACGTCGCTTAATTGCCAATATTGCCGACTGGCTGGAGCTGCATCCGGCAGAAAAACGCCAGCCCTGGTGCGTTGAAATCCCGCGCCTGGCGGAACAGGCAATGCAGGCGGTTATTGCCCGCCGTGATGCGTTTGGCGAAGCGCAACTGGCGCATCGCATCTGCGACTATCTGCCTGAACAGGGGCAATTGTTTGTTGGTAACAGCCTGGTGGTACGTCTGATTGATGCGCTTTCGCAACTTCCGGCAGGTTACCCGGTGTACAGCAACCGTGGGGCCAGCGGTATCGACGGGCTGCTTTCGACCGCCGCCGGCGTTCAGCGGGCAAGCGGCAAACCGACGCTGGCGATTGTGGGCGATCTCTCCGCACTTTACGATCTCAACGCGCTGGCGTTATTGCGTCAGGTTTCTGCGCCGCTGGTATTAATTGTGGTGAACAACAACGGCGGGCAAATTTTCTCGCTGTTGCCAACGCCGCAAAGCGAGCGTGAGCGTTTCTATCTGATGCCGCAAAACGTCCATTTTGAGCACGCCGCCGCGATGTTCGAGCTGAAATATCATCGTCCGCAAAACTGGCAGGAACTTGAAACGGCATTTGCCGACGCCTGGCGCACGCCAACCACCACGGTGATTGAAATGGTGGTTAACGACACCGATGGTGCGCAAACGCTCCAGCAACTTCTGGCGCAGGTAAGCCATTTATGA", + "dna_sequence_length": 1671, + "functions": [ + "2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase", + "SEPHCHC synthase" + ], + "id": "CDS_2249", + "location": [ + [ + "NC_000913", + 2379259, + "-", + 1671 + ] + ], + "md5": "43cdd84d48f465b60e94a2d7ec9cb31f", + "parent_gene": "", + "protein_md5": "c9620a734dc63f2ffb4a0542c6ba0fb6", + "protein_translation": "MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL", + "protein_translation_length": 556, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007485" + ], + [ + "gene_synonym", + "ECK2259" + ], + [ + "gene_synonym", + "EcoGene:EG12362" + ], + [ + "gene_synonym", + "GI:90111411" + ], + [ + "gene_synonym", + "GeneID:946712" + ], + [ + "gene_synonym", + "JW2260" + ], + [ + "gene_synonym", + "NP_416768.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38051" + ], + [ + "gene_synonym", + "b2265" + ], + [ + "gene_synonym", + "menF" + ], + [ + "gene_synonym", + "yfbA" + ] + ], + "dna_sequence": "GTGCAATCACTTACTACGGCGCTGGAAAATCTACTGCGCCATTTGTCGCAAGAGATTCCGGCGACACCCGGCATTCGGGTTATCGATATTCCTTTCCCTCTCAAAGACGCTTTTGATGCCTTGAGCTGGCTGGCCAGTCAGCAAACATACCCGCAATTCTACTGGCAACAACGTAATGGTGATGAAGAAGCTGTCGTCCTGGGCGCGATTACCCGTTTTACGTCGTTGGACCAGGCACAACGTTTTCTTCGCCAGCACCCGGAACACGCCGACTTACGCATTTGGGGGCTGAATGCTTTTGACCCGTCGCAGGGCAATTTACTTTTACCCCGCCTGGAATGGCGACGCTGTGGCGGTAAAGCCACGCTGCGGCTGACGCTATTCAGCGAAAGCTCCCTTCAGCACGATGCGATTCAGGCAAAAGAATTTATCGCCACACTGGTGAGTATCAAGCCCTTGCCTGGGTTACATTTAACCACCACGCGAGAACAACACTGGCCGGACAAAACGGGCTGGACGCAATTAATCGAACTGGCAACGAAAACCATCGCCGAAGGTGAGCTCGACAAAGTGGTGCTCGCTCGGGCAACTGACCTGCATTTCGCAAGTCCGGTCAACGCGGCGGCGATGATGGCTGCCAGTCGTCGACTGAATCTGAATTGCTACCATTTTTACATGGCCTTTGATGGCGAAAATGCTTTTCTTGGCTCTTCACCGGAACGGTTATGGCGGCGGCGTGACAAAGCGCTGCGTACTGAAGCGCTGGCGGGAACAGTAGCAAATAATCCTGATGATAAGCAGGCGCAGCAGTTAGGAGAGTGGCTGATGGCGGATGATAAAAACCAGCGCGAGAACATGCTGGTGGTGGAAGATATCTGTCAACGATTACAGGCCGATACCCAGACGCTGGATGTTTTACCGCCGCAGGTACTGCGTCTGCGTAAAGTGCAGCATCTTCGCCGCTGTATCTGGACTTCACTCAACAAAGCGGATGATGTGATCTGTTTACATCAGTTGCAGCCAACGGCAGCAGTTGCTGGCTTACCGCGCGATCTGGCGCGACAGTTTATCGCCCGTCACGAACCGTTCACCCGAGAATGGTACGCCGGTTCTGCGGGCTATCTCTCATTACAACAAAGCGAATTCTGCGTTTCCCTGCGCTCAGCAAAAATTAGCGGCAATGTCGTGCGATTATATGCTGGCGCGGGCATTGTCCGTGGTTCCGACCCCGAGCAAGAGTGGCAGGAAATCGACAACAAAGCGGCAGGGCTGCGTACTTTATTACAAATGGAATAG", + "dna_sequence_length": 1296, + "functions": [ + "isochorismate synthase 2" + ], + "id": "CDS_2250", + "location": [ + [ + "NC_000913", + 2380643, + "-", + 1296 + ] + ], + "md5": "bbc59a5220a067753768081d49519d50", + "parent_gene": "", + "protein_md5": "6a6d5daae3c20dedf63b33e6157702e4", + "protein_translation": "MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWLASQQTYPQFYWQQRNGDEEAVVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKISGNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME", + "protein_translation_length": 431, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007487" + ], + [ + "gene_synonym", + "ECK2260" + ], + [ + "gene_synonym", + "EcoGene:EG13185" + ], + [ + "gene_synonym", + "GI:16130201" + ], + [ + "gene_synonym", + "GeneID:946751" + ], + [ + "gene_synonym", + "JW2261" + ], + [ + "gene_synonym", + "NP_416769.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEH5" + ], + [ + "gene_synonym", + "b2266" + ], + [ + "gene_synonym", + "elaB" + ], + [ + "gene_synonym", + "yfbD" + ] + ], + "dna_sequence": "ATGTCTAATCAGTTTGGTGATACACGTATCGATGACGACCTGACGCTGCTTAGTGAAACACTGGAAGAGGTGCTCCGCTCCTCTGGCGATCCCGCCGATCAGAAATATGTTGAGCTGAAAGCGCGTGCAGAAAAAGCGCTGGATGATGTGAAAAAACGGGTTAGCCAGGCTTCAGACAGTTATTACTATCGGGCGAAGCAGGCAGTTTATCGTGCTGATGACTACGTCCACGAAAAACCCTGGCAAGGAATTGGTGTGGGCGCGGCCGTTGGGCTGGTACTAGGACTGTTGCTGGCACGCCGTTAA", + "dna_sequence_length": 306, + "functions": [ + "putative membrane-anchored DUF883 family ribosome-binding protein" + ], + "id": "CDS_2251", + "location": [ + [ + "NC_000913", + 2381027, + "-", + 306 + ] + ], + "md5": "a304e0814059b08dbcc961704fc74685", + "parent_gene": "", + "protein_md5": "00926371a557641dc94145ad2fafee4b", + "protein_translation": "MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007489" + ], + [ + "gene_synonym", + "ECK2261" + ], + [ + "gene_synonym", + "EcoGene:EG13184" + ], + [ + "gene_synonym", + "GI:16130202" + ], + [ + "gene_synonym", + "GeneID:946750" + ], + [ + "gene_synonym", + "JW2262" + ], + [ + "gene_synonym", + "NP_416770.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEH3" + ], + [ + "gene_synonym", + "b2267" + ], + [ + "gene_synonym", + "elaA" + ], + [ + "gene_synonym", + "yfbC" + ] + ], + "dna_sequence": "ATGATTGAATGGCAAGATCTGCATCACTCTGAATTATCGGTTTCCCAGCTTTATGCCTTATTACAACTGCGTTGCGCGGTGTTTGTTGTCGAGCAGAATTGCCCTTATCAGGATATCGATGGTGATGATTTGACGGGGGATAATCGCCATATTCTCGGTTGGAAAAATGATGAACTGGTGGCGTATGCGAGGATTCTGAAAAGTGATGATGATCTTGAGCCGGTCGTTATAGGTCGGGTGATTGTCAGTGAAGCGTTGCGTGGCGAAAAAGTGGGGCAGCAGCTGATGAGTAAAACACTCGAAACATGTACGCATCACTGGCCTGATAAGCCTGTTTACCTCGGGGCGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGTTTTATCCCTGTGACGGAGGTCTATGAAGAAGATGGTATCCCACACATTGGGATGGCACGCGAGGTAATTCAGGCGTAA", + "dna_sequence_length": 462, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_2252", + "location": [ + [ + "NC_000913", + 2381543, + "-", + 462 + ] + ], + "md5": "64fc1ab5c91fd8813072230abd67f6e7", + "parent_gene": "", + "protein_md5": "f60b025dbae23e3ebb8e35b400d5830d", + "protein_translation": "MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLETCTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007496" + ], + [ + "gene_synonym", + "ECK2262" + ], + [ + "gene_synonym", + "EcoGene:EG14260" + ], + [ + "gene_synonym", + "GI:90111412" + ], + [ + "gene_synonym", + "GeneID:946760" + ], + [ + "gene_synonym", + "JW2263" + ], + [ + "gene_synonym", + "NP_416771.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8V0" + ], + [ + "gene_synonym", + "b2268" + ], + [ + "gene_synonym", + "ecoZ" + ], + [ + "gene_synonym", + "elaC" + ], + [ + "gene_synonym", + "rbn" + ], + [ + "gene_synonym", + "rnz" + ], + [ + "gene_synonym", + "zipD" + ] + ], + "dna_sequence": "ATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATACCGCCTTTAACCCTGGAAAACTGGACAAGATTTTTATCAGTCACCTTCATGGCGATCATCTTTTTGGTTTACCCGGCTTGCTGTGCAGTCGTTCTATGTCAGGCATTATCCAACCCTTAACGATTTATGGTCCGCAAGGTATCCGTGAATTTGTGGAAACCGCGCTGCGGATTAGCGGCTCATGGACCGATTATCCGCTGGAAATTGTCGAAATTGGCGCTGGCGAAATTCTCGATGATGGCCTGCGCAAAGTAACCGCTTATCCGCTGGAACACCCACTGGAATGTTATGGCTATCGTATTGAAGAACATGATAAACCGGGTGCATTAAATGCCCAGGCATTAAAAGCTGCTGGCGTGCCGCCTGGCCCACTGTTTCAGGAATTAAAAGCGGGCAAAACAATCACGCTGGAAGATGGAAGGCAGATTAACGGCGCAGATTACTTAGCTGCTCCAGTGCCAGGTAAAGCGCTCGCTATTTTCGGCGATACCGGCCCCTGCGATGCCGCACTTGACCTGGCTAAAGGTGTCGATGTCATGGTGCACGAAGCGACGCTGGATATAACCATGGAAGCCAAAGCCAATAGTCGCGGCCATAGCTCTACACGCCAGGCTGCGACACTAGCCCGTGAGGCTGGAGTCGGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAA", + "dna_sequence_length": 918, + "functions": [ + "RNase BN, tRNA processing enzyme" + ], + "id": "CDS_2253", + "location": [ + [ + "NC_000913", + 2381608, + "+", + 918 + ] + ], + "md5": "563f3376bf90d291379a6c9705092ae0", + "parent_gene": "", + "protein_md5": "e570b1ca4c4fc5bb1dd2c2ddbdf24052", + "protein_translation": "MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDFTVFNV", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007499" + ], + [ + "gene_synonym", + "ECK2263" + ], + [ + "gene_synonym", + "EcoGene:EG14261" + ], + [ + "gene_synonym", + "GI:16130204" + ], + [ + "gene_synonym", + "GeneID:946742" + ], + [ + "gene_synonym", + "JW5840" + ], + [ + "gene_synonym", + "NP_416772.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47013" + ], + [ + "gene_synonym", + "b2269" + ], + [ + "gene_synonym", + "elaD" + ] + ], + "dna_sequence": "ATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAAATTTGGGAAAGAAGCTGAAGATATTCTTTACCATATTGTTAGAACCCCAACAAATGAGACCCTATCGATTATCCGACTTATCAAAAATGCTTGTTTAAAATTATATAATCTGGCACATATCGCAACCAACTCCCCCCTCAAATCACATGATTCAGATGATCTCCTGTTCAAAAAACTATTCTCCCCTTCGAAATTAATGACAATTATCGGTGATGAAATTCCTCTTATATCTGAAAAACAGTCGCTTTCAAAGGTGCTTTTAAATGATGAGAATAATGAACTGAGTGATGGTACAAACTTCTGGGATAAAAATCGTCAATTAACCACAGATGAAATAGCTTGCTATCTTCAGAAGATCGCCGCTAATGCAAAAAATACTCAAGTCAATTATCCTACTGGTCTCTACGTCCCCTACTCCACCAGAACTCACCTGGAAGACGCTCTCAATGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAATAAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGATCTTCAGCAATACTTAAGCCAAAGTTGCGGTGCATTTGTGTGCATGGCAGCCCAGGAAGTGATTGAACAAAGGGAAAGCAATTCTGACAGCGCCCCCTATACGTTATTAAAAAACCATGCTGACAGATTTAAAAAATATTCAGCAGAAGAGCAGTACGAAATTGATTTTCAACATCGACTGGCAAACAGAAATTGTTATTTAGATAAATATGGCGATGCAAATATCAATCATTATTATAGAAACTTAGAAATAAAACACTCACAACCCAAAAATAGAGCATCCGGCAAAAGAGTGAGTTAA", + "dna_sequence_length": 1212, + "functions": [ + "protease, capable of cleaving an AMC-ubiquitin model substrate" + ], + "id": "CDS_2254", + "location": [ + [ + "NC_000913", + 2382713, + "+", + 1212 + ] + ], + "md5": "1da761ba899532f395701e318efcaeb4", + "parent_gene": "", + "protein_md5": "b48a66f5783df9fdee545754898beab5", + "protein_translation": "MMVTVVSNYCQLSQTQLSQTFAEKFTVTEELLQSLKKTALSGDEESIELLHNIALGYDKFGKEAEDILYHIVRTPTNETLSIIRLIKNACLKLYNLAHIATNSPLKSHDSDDLLFKKLFSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDGTNFWDKNRQLTTDEIACYLQKIAANAKNTQVNYPTGLYVPYSTRTHLEDALNENIKSDPSWPNEVQLFPINTGGHWILVSLQKIVNKKNNKLQIKCVIFNSLRALGYDKENSLKRVINSFNSELMGEMSNNNIKVHLNEPEIIFLHADLQQYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLLKNHADRFKKYSAEEQYEIDFQHRLANRNCYLDKYGDANINHYYRNLEIKHSQPKNRASGKRVS", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007501" + ], + [ + "gene_synonym", + "ECK2264" + ], + [ + "gene_synonym", + "EcoGene:EG14095" + ], + [ + "gene_synonym", + "GI:16130205" + ], + [ + "gene_synonym", + "GeneID:946743" + ], + [ + "gene_synonym", + "JW2265" + ], + [ + "gene_synonym", + "NP_416773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76481" + ], + [ + "gene_synonym", + "b2270" + ], + [ + "gene_synonym", + "yfbK" + ] + ], + "dna_sequence": "ATGCGAAATAAAAATATAATCATGTTGCTTATGAGTAGTTTGATTTTGTCAGGATGTGGGCCGCAACCTGAGAATAAGGAAAGTCAGCAACAACAACCCAGTACTCCCACAGAGCAGCAAGTGCTTGCCGCGCAGCAAGCTGCAATAAAAGAGGCTGAGCAAAGCGCCGCCGCCGCGAAAGCCTTGGCCCAGCAAGAAGTGCAACAATATTCAGACAAACAGGCTTTACAGGGGCGATTGCAGGAAGCGCCAACATTTGCAAGAGCGGCTAAAGCAAAAGCTACACATATCGCAAATCCAGGAACCGCTCGCTACCAGCAGTTCGATGATAATCCGGTTAAGCAGGTAGCGCAAAATCCGTTGGCGACGTTTAGTCTTGACGTTGACACTGGCAGTTATGCGAATGTAAGGCGTTTCCTCAATCAAGGGCTGTTACCTCCGCCAGACGCTGTGCGGGTGGAGGAGATAGTCAATTATTTCCCGTCTGATTGGGATATCAAAGACAAACAATCTATTCCGGCCTCTAAGCCAATACCTTTCGCTATGCGCTACGAATTGGCACCTGCACCATGGAATGAACAGCGAACATTGCTGAAAGTTGATATCCTGGCGAAAGATCGCAAAAGTGAAGAGTTACCAGCTTCTAATCTGGTCTTTCTTATCGACACTTCTGGTTCAATGATTTCTGATGAACGTTTGCCACTTATCCAGTCTTCGTTGAAATTATTGGTCAAAGAACTTCGTGAGCAGGATAACATTGCCATCGTGACCTACGCTGGCGACTCCCGTATTGCATTGCCTTCTATCTCCGGGAGTCATAAGGCGGAAATTAATGCCGCAATTGATTCGCTGGATGCCGAAGGCAGTACCAATGGCGGTGCCGGGCTGGAACTGGCTTATCAGCAGGCGACGAAGGGGTTTATTAAGGGCGGCATCAATCGCATTTTATTAGCCACTGACGGTGACTTTAACGTTGGCATTGACGATCCAAAATCGATTGAATCAATGGTCAAAAAACAGCGGGAGTCTGGTGTTACTCTGTCGACGTTTGGCGTGGGGAATAGCAATTACAACGAGGCAATGATGGTGCGAATTGCCGATGTTGGTAACGGCAACTACAGCTACATTGATACCCTCTCTGAAGCGCAGAAAGTATTGAATAGTGAAATGCGGCAGATGTTGATTACCGTAGCAAAAGATGTCAAAGCGCAAATTGAGTTTAACCCCGCGTGGGTAACGGAATACCGTCAGATTGGTTATGAAAAGCGCCAACTTCGGGTGGAACATTTTAATAACGACAACGTTGATGCAGGGGATATAGGCGCAGGCAAACATATAACGTTGTTATTCGAATTAACGCTGAACGGGCAAAAAGCATCAATTGATAAGTTACGCTATGCCCCGGATAACAAATTAGCGAAATCGGACAAAACGAAAGAACTGGCCTGGTTAAAAATTCGCTGGAAATACCCGCAGGGAAAAGAAAGTCAGTTAGTTGAATTCCCGCTGGGGCCAACAATAAACGCGCCCTCTGAAGATATGCGTTTTCGCGCAGCAGTAGCTGCATATGGGCAAAAGTTACGCGGTTCTGAATACCTGAACAATACCTCCTGGCAGCAGATCAAACAGTGGGCTCAGCAGGCAAAAGGGGAAGATCCACAGGGTTACAGGGCGGAATTTATTCGCCTGATTGAACTGGCGGATGGTGTGACTGACATCAGTCAGTGA", + "dna_sequence_length": 1728, + "functions": [ + "Von Willebrand factor domain putative lipoprotein" + ], + "id": "CDS_2255", + "location": [ + [ + "NC_000913", + 2385722, + "-", + 1728 + ] + ], + "md5": "c9a5d3ebf95f5a4ff583e01a440e9bd6", + "parent_gene": "", + "protein_md5": "1d2f1cc52837a5700adfd2163473b959", + "protein_translation": "MRNKNIIMLLMSSLILSGCGPQPENKESQQQQPSTPTEQQVLAAQQAAIKEAEQSAAAAKALAQQEVQQYSDKQALQGRLQEAPTFARAAKAKATHIANPGTARYQQFDDNPVKQVAQNPLATFSLDVDTGSYANVRRFLNQGLLPPPDAVRVEEIVNYFPSDWDIKDKQSIPASKPIPFAMRYELAPAPWNEQRTLLKVDILAKDRKSEELPASNLVFLIDTSGSMISDERLPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALPSISGSHKAEINAAIDSLDAEGSTNGGAGLELAYQQATKGFIKGGINRILLATDGDFNVGIDDPKSIESMVKKQRESGVTLSTFGVGNSNYNEAMMVRIADVGNGNYSYIDTLSEAQKVLNSEMRQMLITVAKDVKAQIEFNPAWVTEYRQIGYEKRQLRVEHFNNDNVDAGDIGAGKHITLLFELTLNGQKASIDKLRYAPDNKLAKSDKTKELAWLKIRWKYPQGKESQLVEFPLGPTINAPSEDMRFRAAVAAYGQKLRGSEYLNNTSWQQIKQWAQQAKGEDPQGYRAEFIRLIELADGVTDISQ", + "protein_translation_length": 575, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007506" + ], + [ + "gene_synonym", + "ECK2265" + ], + [ + "gene_synonym", + "EcoGene:EG14096" + ], + [ + "gene_synonym", + "GI:90111413" + ], + [ + "gene_synonym", + "GeneID:945832" + ], + [ + "gene_synonym", + "JW2266" + ], + [ + "gene_synonym", + "NP_416774.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76482" + ], + [ + "gene_synonym", + "b2271" + ], + [ + "gene_synonym", + "yfbL" + ] + ], + "dna_sequence": "ATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGGTCTTTGTCAGTAGCGGTGCCAGAGTTACCTCGCAGGACGTCCCCATTACGGGTGGCCCCTACAAAAACATTGTTGCTGATTATGGTCCTGCCGATGGACCGCTGATTATTATTGGTGCGCATTATGACTCTGCCAGCAGTTATGAAAACGATCAATTGACCTATACGCCGGGCGCGGATGATAACGCCAGCGGTGTGGCAGGATTACTCGAACTGGCACGTTTGTTACATCAGCAAGTACCGAAAACAGGCGTGCAGCTGGTCGCCTATGCGTCGGAAGAACCGCCCTTCTTTCGTAGCGATGAAATGGGGAGCGCGGTGCATGCAGCTTCGCTTGAGCGTCCAGTGAAATTAATGATAGCACTGGAGATGATTGGCTATTACGACTCTGCGCCTGGAAGCCAGAATTACCCTTACCCGGCAATGTCCTGGCTTTATCCCGATCGGGGAGACTTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAA", + "dna_sequence_length": 972, + "functions": [ + "putative M28A family peptidase" + ], + "id": "CDS_2256", + "location": [ + [ + "NC_000913", + 2385860, + "+", + 972 + ] + ], + "md5": "5c97b9a56f8b9da2fcfc78132dfae2ea", + "parent_gene": "", + "protein_md5": "16e9d102869171f7f116465f8ac3a806", + "protein_translation": "MKKIIFAFIILFVFLLPMIIFYQPWVNALPSTPRHASPEQLEKTVRYLTQTVHPRSADNIDNLNRSAEYIKEVFVSSGARVTSQDVPITGGPYKNIVADYGPADGPLIIIGAHYDSASSYENDQLTYTPGADDNASGVAGLLELARLLHQQVPKTGVQLVAYASEEPPFFRSDEMGSAVHAASLERPVKLMIALEMIGYYDSAPGSQNYPYPAMSWLYPDRGDFIAVVGRIQDINAVRQVKAALLSSQDLSVYSMNTPGFIPGIDFSDHLNYWQHDIPAIMITDTAFYRNKQYHLPGDTADRLNYQKMAQVVDGVITLLYNSK", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007509" + ], + [ + "gene_synonym", + "ECK2266" + ], + [ + "gene_synonym", + "EcoGene:EG14097" + ], + [ + "gene_synonym", + "GI:16130207" + ], + [ + "gene_synonym", + "GeneID:946745" + ], + [ + "gene_synonym", + "JW2267" + ], + [ + "gene_synonym", + "NP_416775.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76483" + ], + [ + "gene_synonym", + "b2272" + ], + [ + "gene_synonym", + "yfbM" + ] + ], + "dna_sequence": "ATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCTTTTGATCCCGCGAAGAATGATCCGCTGAGTCGTGCCGTGCTTGGTGAACACAGCCTCGAAGATGGCATAGATGGCTTCCTTGGATTGACCTGGAATCAGGAGTTAGCCGCGACAATCGACCGACTGGAATCACTGGATCGAAATGAACTGCGTAAACAGTTTTCCATTAAGCGACTCAATGAAATGGAGATTTATCCGGGAGTGACCTTTTCAGAAGAGTTAGAGGGGCAACTCTTTGCCTCGATCATGCTTGATATGGAAAAGCTGATTAGCGCGTATCGACGTATGCTGCGACAAGGGAATCATGCGCTGACGGTTATTGTTGGGTGA", + "dna_sequence_length": 504, + "functions": [ + "DUF1877 family protein" + ], + "id": "CDS_2257", + "location": [ + [ + "NC_000913", + 2386934, + "+", + 504 + ] + ], + "md5": "a6ccccb1b3ad85d41200bbe89095aaa1", + "parent_gene": "", + "protein_md5": "c167705fba3c308ba95a407e4b48ea83", + "protein_translation": "MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007511" + ], + [ + "gene_synonym", + "ECK2267" + ], + [ + "gene_synonym", + "EcoGene:EG14098" + ], + [ + "gene_synonym", + "GI:16130208" + ], + [ + "gene_synonym", + "GeneID:946748" + ], + [ + "gene_synonym", + "JW2268" + ], + [ + "gene_synonym", + "NP_416776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76484" + ], + [ + "gene_synonym", + "b2273" + ], + [ + "gene_synonym", + "yfbN" + ] + ], + "dna_sequence": "ATGGAATGGTTAAGTGAAATTCGTAAACTTCGGAAGAACGTACCTGTCGGTATCCAGGTTGCCAGACGTTTGTTAGAGAGGACTGGCGGTGATGTTGATGAAGCCATCAAGTTGTTTCATATTGACCAAATCAATATATTGACGGCAAAAGCAGACGTCACTCATCAGGAAGCAGAGAATGTTTTGTTGGCTACAAACTATGATATTGCAGAAGCTCTTCGGCGTATTGATGAACAACGCTATACACTGACGGAATTGATTTTGCGTAAAAATAAGGATGCCGGAGATGCCTTAAACAATATAGCATTGGCGATTGAATATGAGTGGGATCTCAAGCGTAAGTTTTGGTTTGGTTTTGCAGATATCCAATTATTACCGCCAGTTTTACAAACATTTATGCTGGTTTATGAATGGCATGAATATGTTGGTTGGGAAGGAATGGAGTGTGGGATATTTTTTGAAAGTGATCATACTCACCAGCAATTGCAAGCTTTGGGGTTATTAGAACTCGCCCAAAAAATGGTTACTGCAAGAATCCGATATGATGAGCTAAAAGACAAGGCCGAAAATTTTCACGAGATTACAGAGGATGACATATTCAAAATGCTTATAATACATTGTGACCAACTTGCAAGAGAGGTTGATTCTATATTACTGCAATTTGTGAAGGACAATATTGATGTTTTCCCGTGTCGCCATAACAGACACGAGTTATAA", + "dna_sequence_length": 717, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2258", + "location": [ + [ + "NC_000913", + 2388426, + "-", + 717 + ] + ], + "md5": "1820b4e2640d985df2d105bd78534c29", + "parent_gene": "", + "protein_md5": "86ae019ca6dbf32d41f269e7ccf0d4d0", + "protein_translation": "MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007518" + ], + [ + "gene_synonym", + "ECK2268" + ], + [ + "gene_synonym", + "EcoGene:EG14099" + ], + [ + "gene_synonym", + "GI:226524734" + ], + [ + "gene_synonym", + "GeneID:946752" + ], + [ + "gene_synonym", + "JW2269" + ], + [ + "gene_synonym", + "NP_416777.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76485" + ], + [ + "gene_synonym", + "b2274" + ], + [ + "gene_synonym", + "yfbO" + ] + ], + "dna_sequence": "ATGACACCTTTAGAACGCATTACCCAACTTGTTAATATCAATGGTGATGTTAATAATCCTGATACTCCTCGTCCATTGTTATCTCTTGAGGATTTTTTTATTGACAATAATATCCATGGTTCAATATGTTGCAATGTGATTCCAGAACAATCTCCGCAAGCTATCTATCACCATTTTCTGAAAATACGTGAGCGTAACAATGTTAGTGATGTTTTGGTAGAAATTACGATGTTCGATGACCCAGACTGGCCCTTTAGTGAAAGTATTTTAGTTATCACCACTGCTTCACCAGAAGAAGTTCAGAGCTGGTTTGTAGAAGAAATTGCCCCTGATGAGTGCTGGGAAGGATGGTCAGAAGATACGGAGCATGGATGGGTTGAAGTCCCTGTGGGTATGCATCCGGTTACTTGTTGGTGGGATTAA", + "dna_sequence_length": 423, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2259", + "location": [ + [ + "NC_000913", + 2388635, + "+", + 423 + ] + ], + "md5": "7305378500150d0b3f58c95afed5f546", + "parent_gene": "", + "protein_md5": "594613c09ca4c1ea1e5657fe80067111", + "protein_translation": "MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007524" + ], + [ + "gene_synonym", + "ECK2269" + ], + [ + "gene_synonym", + "EcoGene:EG14100" + ], + [ + "gene_synonym", + "GI:345452721" + ], + [ + "gene_synonym", + "GeneID:946754" + ], + [ + "gene_synonym", + "JW2270" + ], + [ + "gene_synonym", + "NP_416778.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76486" + ], + [ + "gene_synonym", + "b2275" + ], + [ + "gene_synonym", + "yfbP" + ] + ], + "dna_sequence": "ATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGCCCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGTGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTGATACTTATTTTGCGCAGAGAAAACCGCTTCAGGCATTAACCCTGTTACATAATTATGCCTGGATAATGTCCAGTGAAACGACTGCATTTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAA", + "dna_sequence_length": 849, + "functions": [ + "TPR-like repeats-containing protein" + ], + "id": "CDS_2260", + "location": [ + [ + "NC_000913", + 2389116, + "+", + 849 + ] + ], + "md5": "dd4cf7606d3d6f397c84e0ffcb0f4009", + "parent_gene": "", + "protein_md5": "2a56b67a8afad091f5da9e616f631735", + "protein_translation": "MKLIPRSSDISPGIDGICPGPFPPNGFTVLTDAAYGNGDCFGLYWPIGQEHKLPIVCETYHDEWRIVPAFSSIKKFEEWLEVNDDDPHENGISIEDQDFAANLFRVARKCLSTGRLDDALPLLQRATEQLPEVSEYWLALAIQYRRCKKTEAAAQAALNAYLGNWAFGVPDNKVIHLLSQAADVPNFQDDPVIQCIKEQGLDLSFGGTKENNNYPLMQMCVDTYFAQRKPLQALTLLHNYAWIMSSETTAFQERYDFNIDEWRAKFRQLCLEYFGDSRTQFT", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007526" + ], + [ + "gene_synonym", + "ECK2270" + ], + [ + "gene_synonym", + "EcoGene:EG12093" + ], + [ + "gene_synonym", + "GI:145698289" + ], + [ + "gene_synonym", + "GeneID:945136" + ], + [ + "gene_synonym", + "JW2271" + ], + [ + "gene_synonym", + "NP_416779.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF0" + ], + [ + "gene_synonym", + "b2276" + ], + [ + "gene_synonym", + "nuoN" + ] + ], + "dna_sequence": "ATGACAATAACTCCACAAAACCTGATCGCACTGCTACCGTTGCTGATCGTCGGCTTGACGGTGGTGGTTGTGATGCTCTCCATTGCGTGGCGACGCAATCATTTCCTCAACGCTACGCTCTCGGTTATTGGGCTTAACGCGGCGCTGGTTTCGCTCTGGTTTGTTGGCCAGGCGGGCGCTATGGACGTTACGCCGCTGATGCGCGTTGATGGTTTCGCCATGCTTTACACCGGGCTGGTATTGTTGGCGAGCCTCGCCACCTGTACTTTCGCCTACCCGTGGCTTGAAGGCTATAACGACAACAAGGATGAGTTCTACCTGTTGGTGTTAATTGCCGCGCTGGGCGGGATCCTGCTGGCGAATGCCAACCATCTGGCGTCTCTGTTCCTCGGTATCGAACTGATCTCTTTGCCGCTGTTTGGCCTGGTCGGTTACGCTTTCCGCCAGAAACGTTCACTGGAAGCCAGTATCAAATACACCATCCTTTCTGCCGCAGCGTCTTCTTTCCTGCTGTTTGGTATGGCGCTGGTGTATGCGCAGTCTGGCGACCTGTCGTTTGTCGCGTTGGGTAAAAACCTTGGCGACGGTATGCTCAACGAGCCGCTGTTGCTGGCAGGTTTCGGCCTGATGATTGTTGGCCTCGGCTTCAAACTCTCTCTGGTGCCGTTCCACCTGTGGACGCCAGACGTATACCAGGGCGCGCCTGCGCCGGTTTCCACTTTCCTGGCGACGGCGAGCAAAATCGCTATCTTCGGTGTGGTGATGCGTCTGTTCCTCTACGCACCGGTGGGTGACAGCGAAGCGATTCGCGTGGTGCTGGCGATTATCGCCTTTGCCTCCATCATCTTCGGTAACCTGATGGCGCTGAGCCAGACCAATATCAAACGTCTGCTCGGTTACTCATCTATCTCTCACCTCGGCTATCTGCTGGTAGCGCTGATTGCGCTGCAAACCGGCGAGATGTCGATGGAAGCGGTAGGGGTTTACCTGGCCGGTTATCTGTTCAGCAGCCTCGGCGCGTTCGGCGTGGTCAGCCTGATGTCCAGCCCGTATCGTGGCCCGGATGCTGATTCCCTGTTCTCTTACCGCGGTCTGTTCTGGCATCGTCCGATCCTCGCGGCAGTGATGACGGTGATGATGCTGTCTCTGGCCGGTATCCCGATGACGCTGGGCTTTATCGGTAAGTTCTACGTGCTGGCGGTCGGTGTCCAGGCACACTTGTGGTGGCTGGTGGGTGCCGTGGTTGTCGGTTCGGCAATCGGCCTCTACTACTACCTGCGCGTGGCGGTGAGCCTGTATCTTCACGCCCCGGAACAACCGGGTCGCGATGCACCATCAAACTGGCAGTACAGCGCGGGCGGTATCGTTGTGCTGATCTCTGCACTGTTGGTACTGGTGCTGGGTGTATGGCCACAACCGCTGATTAGCATTGTGCGTTTGGCAATGCCGCTGATGTAA", + "dna_sequence_length": 1458, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit N" + ], + "id": "CDS_2261", + "location": [ + [ + "NC_000913", + 2391505, + "-", + 1458 + ] + ], + "md5": "449a785c9df45fb963b8499f7247ad51", + "parent_gene": "", + "protein_md5": "4e61f4990888ff483eea44f8c378b922", + "protein_translation": "MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM", + "protein_translation_length": 485, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007529" + ], + [ + "gene_synonym", + "ECK2271" + ], + [ + "gene_synonym", + "EcoGene:EG11773" + ], + [ + "gene_synonym", + "GI:16130212" + ], + [ + "gene_synonym", + "GeneID:947731" + ], + [ + "gene_synonym", + "JW2272" + ], + [ + "gene_synonym", + "NP_416780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFE8" + ], + [ + "gene_synonym", + "b2277" + ], + [ + "gene_synonym", + "nuoA" + ], + [ + "gene_synonym", + "nuoM" + ] + ], + "dna_sequence": "ATGTTACTACCCTGGCTAATATTAATTCCCTTTATTGGCGGCTTCCTGTGCTGGCAGACCGAACGCTTTGGCGTCAAGGTGCCACGCTGGATCGCGCTGATCACCATGGGATTGACGCTGGCGCTGTCGCTGCAACTGTGGTTGCAGGGCGGTTATTCACTGACGCAATCCGCCGGAATTCCGCAGTGGCAGTCTGAATTCGACATGCCGTGGATCCCGCGTTTTGGTATCTCTATTCATCTCGCCATTGACGGGCTGTCGCTGCTGATGGTCGTGCTGACCGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGATTGCCATCCTGGCGCTGGTTTTTGTTCACTACAATGCGACCGGCGTCTGGACCTTCAACTATGAAGAGCTGCTGAATACGCCAATGTCCAGTGGTGTGGAATACCTGTTAATGCTGGGCTTCTTCATCGCCTTCGCAGTCAAAATGCCGGTGGTTCCGCTGCATGGCTGGCTGCCGGATGCGCACTCCCAGGCTCCGACCGCCGGTTCCGTTGACCTCGCGGGGATCTTGCTGAAAACTGCCGCTTACGGTTTGCTGCGTTTCTCCCTGCCGCTGTTCCCGAACGCGTCGGCAGAGTTCGCGCCAATTGCTATGTGGCTGGGTGTTATCGGCATCTTCTACGGTGCGTGGATGGCCTTCGCCCAGACCGATATCAAACGTCTGATCGCCTACACCTCGGTTTCCCACATGGGCTTCGTGCTGATTGCTATCTACACCGGCAGCCAGTTGGCCTACCAGGGCGCGGTAATCCAGATGATTGCGCACGGTTTGTCGGCGGCGGGTCTGTTTATTCTTTGTGGTCAGCTTTATGAACGTATCCATACCCGCGACATGCGCATGATGGGCGGTCTGTGGAGCAAGATGAAATGGCTGCCAGCACTGTCGCTGTTCTTTGCGGTGGCAACGCTTGGGATGCCTGGCACCGGTAACTTCGTCGGCGAATTTATGATTCTGTTCGGCAGCTTCCAGGTTGTACCGGTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGTGAGCTGTTTATGATCCTGTTGCTGGTGGTGCTGCTGGTACTGCTGGGCTTCTATCCGCAGCCGATTCTGGATACCTCGCACTCCGCGATTGGCAATATCCAGCAGTGGTTTGTTAATTCCGTTACTACTACAAGGCCGTAA", + "dna_sequence_length": 1530, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit M" + ], + "id": "CDS_2262", + "location": [ + [ + "NC_000913", + 2393041, + "-", + 1530 + ] + ], + "md5": "04d2a8a4b5a7d1df5e703899918145fd", + "parent_gene": "", + "protein_md5": "5472dc539785dfa1047e5dc5e1ab8e7e", + "protein_translation": "MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP", + "protein_translation_length": 509, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007532" + ], + [ + "gene_synonym", + "ECK2272" + ], + [ + "gene_synonym", + "EcoGene:EG12092" + ], + [ + "gene_synonym", + "GI:16130213" + ], + [ + "gene_synonym", + "GeneID:945540" + ], + [ + "gene_synonym", + "JW2273" + ], + [ + "gene_synonym", + "NP_416781.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33607" + ], + [ + "gene_synonym", + "b2278" + ], + [ + "gene_synonym", + "nuoL" + ] + ], + "dna_sequence": "ATGAACATGCTTGCCTTAACCATTATTTTGCCATTGATTGGCTTCGTCCTGCTGGCATTCTCCCGTGGGCGCTGGTCTGAAAACGTCTCGGCGATCGTCGGCGTAGGCTCTGTGGGCCTGGCGGCGCTGGTAACCGCCTTTATCGGCGTTGATTTCTTCGCTAACGGCGAGCAGACATACAGCCAGCCGCTGTGGACGTGGATGTCGGTAGGCGACTTTAACATCGGTTTTAACCTGGTGCTGGACGGCCTGTCGCTGACCATGCTCTCGGTGGTCACTGGTGTGGGTTTCCTTATTCACATGTACGCCTCCTGGTATATGCGCGGTGAAGAGGGCTACTCTCGCTTCTTCGCTTACACCAACCTGTTCATCGCCAGCATGGTGGTTCTGGTGCTTGCCGACAACCTGCTGCTGATGTACCTCGGCTGGGAAGGCGTGGGCCTGTGCTCCTATCTGCTGATCGGGTTCTATTACACCGATCCGAAGAATGGCGCAGCGGCAATGAAAGCGTTCGTCGTGACCCGTGTGGGTGACGTGTTCCTCGCTTTCGCACTGTTCATTCTTTACAACGAACTGGGCACCCTGAACTTCCGCGAAATGGTGGAACTGGCACCAGCGCACTTTGCTGACGGCAATAACATGCTGATGTGGGCGACGCTGATGCTGCTGGGCGGTGCGGTCGGTAAATCTGCGCAGTTGCCGTTGCAGACATGGCTTGCCGACGCGATGGCGGGCCCGACGCCTGTCTCCGCGCTGATCCACGCCGCAACCATGGTAACCGCGGGTGTCTACCTGATCGCCCGTACCCACGGCCTGTTCCTGATGACGCCGGAAGTTCTGCATCTGGTGGGTATTGTCGGGGCGGTTACGCTGCTGCTGGCCGGTTTTGCCGCGCTGGTACAGACCGACATCAAACGTGTTCTCGCTTACTCTACCATGAGCCAGATTGGCTACATGTTCCTCGCGCTTGGCGTGCAGGCATGGGATGCGGCGATTTTCCACTTGATGACCCACGCGTTCTTTAAAGCGCTGCTGTTCCTGGCATCCGGTTCCGTCATTCTGGCCTGCCATCACGAACAGAACATCTTCAAGATGGGCGGTCTGCGTAAATCTATTCCGCTGGTTTATCTCTGCTTCCTGGTGGGCGGCGCAGCACTGTCGGCACTACCGCTGGTCACTGCGGGCTTCTTCAGTAAGGATGAGATCCTCGCGGGTGCGATGGCGAATGGTCATATCAATCTGATGGTGGCAGGTCTGGTCGGTGCGTTTATGACCTCGCTCTACACCTTCCGTATGATTTTCATCGTCTTCCACGGAAAAGAACAAATTCACGCTCACGCCGTGAAAGGGGTAACTCACAGCCTGCCGCTGATTGTGCTGCTGATCCTTTCCACCTTCGTTGGCGCACTGATTGTACCGCCGCTGCAGGGCGTGCTTCCGCAAACGACGGAACTGGCGCACGGCAGCATGTTGACCCTGGAAATTACCTCTGGCGTGGTCGCGGTGGTCGGCATTCTGCTGGCAGCCTGGCTGTGGCTGGGTAAACGTACTCTGGTGACCTCCATCGCCAACAGTGCGCCGGGCCGTCTGCTGGGCACCTGGTGGTACAACGCCTGGGGATTTGACTGGCTGTATGACAAAGTGTTCGTCAAGCCGTTCCTGGGTATTGCCTGGTTGCTGAAACGCGATCCGCTGAACTCAATGATGAACATCCCGGCTGTCCTTTCCCGCTTTGCAGGTAAAGGTCTGCTGTTAAGTGAGAACGGCTATCTGCGCTGGTATGTGGCATCCATGAGCATCGGTGCGGTCGTGGTGCTGGCACTGTTGATGGTACTGCGTTGA", + "dna_sequence_length": 1842, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit L" + ], + "id": "CDS_2263", + "location": [ + [ + "NC_000913", + 2395046, + "-", + 1842 + ] + ], + "md5": "88fa2d3b67649fbe94c3297372b08ff9", + "parent_gene": "", + "protein_md5": "8186956538afccc908488f644a376133", + "protein_translation": "MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR", + "protein_translation_length": 613, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007534" + ], + [ + "gene_synonym", + "ECK2273" + ], + [ + "gene_synonym", + "EcoGene:EG12091" + ], + [ + "gene_synonym", + "GI:16130214" + ], + [ + "gene_synonym", + "GeneID:947580" + ], + [ + "gene_synonym", + "JW2274" + ], + [ + "gene_synonym", + "NP_416782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFE4" + ], + [ + "gene_synonym", + "b2279" + ], + [ + "gene_synonym", + "nuoK" + ] + ], + "dna_sequence": "ATGATCCCCTTACAACATGGACTGATCCTCGCGGCAATCTTATTCGTTCTTGGCTTAACCGGTCTGGTTATCCGTCGCAATCTGCTGTTTATGTTGATTGGTCTGGAAATCATGATTAACGCCTCCGCGCTGGCCTTCGTGGTCGCCGGAAGCTACTGGGGCCAGACCGACGGTCAGGTGATGTACATTCTCGCCATCAGCCTCGCGGCGGCAGAAGCGAGTATCGGCCTTGCGCTGCTGCTGCAACTTCACCGTCGTCGCCAGAACCTGAACATCGATTCAGTAAGTGAGATGCGCGGATGA", + "dna_sequence_length": 303, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit K" + ], + "id": "CDS_2264", + "location": [ + [ + "NC_000913", + 2395345, + "-", + 303 + ] + ], + "md5": "4e57967ca0836968c184320197c8e852", + "parent_gene": "", + "protein_md5": "26e88bb20aa45666ba298fd045b8a027", + "protein_translation": "MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG", + "protein_translation_length": 100, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007536" + ], + [ + "gene_synonym", + "ECK2274" + ], + [ + "gene_synonym", + "EcoGene:EG12090" + ], + [ + "gene_synonym", + "GI:16130215" + ], + [ + "gene_synonym", + "GeneID:946756" + ], + [ + "gene_synonym", + "JW2275" + ], + [ + "gene_synonym", + "NP_416783.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFE0" + ], + [ + "gene_synonym", + "b2280" + ], + [ + "gene_synonym", + "nuoJ" + ] + ], + "dna_sequence": "ATGGAGTTCGCTTTTTATATCTGTGGCCTGATAGCCATACTTGCGACCTTGCGAGTGATCACCCATACCAATCCGGTACACGCACTGCTGTACCTGATTATTTCGCTGCTGGCGATTTCCGGGGTGTTCTTCTCACTGGGCGCTTACTTCGCCGGTGCGCTGGAAATTATCGTCTACGCGGGTGCCATTATGGTGCTGTTCGTGTTCGTGGTGATGATGCTCAACCTGGGCGGTTCAGAAATCGAACAGGAACGCCAGTGGCTGAAACCGCAGGTGTGGATTGGTCCGGCAATTTTGTCGGCCATCATGCTGGTGGTGATTGTTTACGCCATCCTCGGTGTTAACGATCAGGGTATCGACGGTACGCCAATCAGTGCTAAAGCAGTGGGTATTACGCTGTTCGGGCCTTACGTACTGGCGGTGGAACTGGCTTCTATGCTGCTGCTCGCAGGTCTGGTTGTGGCCTTCCACGTCGGTCGTGAAGAGCGTGCGGGTGAAGTGCTGAGCAATCGTAAAGACGACAGCGCGAAAAGAAAAACGGAGGAGCACGCATGA", + "dna_sequence_length": 555, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit J" + ], + "id": "CDS_2265", + "location": [ + [ + "NC_000913", + 2395896, + "-", + 555 + ] + ], + "md5": "fadd6e02330e6dccf17ee435de01249d", + "parent_gene": "", + "protein_md5": "dadb23aca088493e208ad39c45dda147", + "protein_translation": "MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRKDDSAKRKTEEHA", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007539" + ], + [ + "gene_synonym", + "ECK2275" + ], + [ + "gene_synonym", + "EcoGene:EG12089" + ], + [ + "gene_synonym", + "GI:16130216" + ], + [ + "gene_synonym", + "GeneID:946757" + ], + [ + "gene_synonym", + "JW2276" + ], + [ + "gene_synonym", + "NP_416784.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFD6" + ], + [ + "gene_synonym", + "b2281" + ], + [ + "gene_synonym", + "nuoI" + ] + ], + "dna_sequence": "ATGACCTTAAAAGAATTGTTAGTAGGTTTCGGCACCCAGGTTCGTAGTATCTGGATGATCGGCCTGCACGCGTTCGCCAAACGCGAAACGCGAATGTACCCGGAAGAGCCGGTCTATCTGCCGCCCCGTTATCGTGGTCGTATCGTTCTGACCCGCGACCCGGACGGCGAAGAGCGTTGCGTAGCCTGTAACCTCTGCGCGGTAGCCTGCCCGGTCGGCTGTATCTCGCTGCAAAAAGCAGAAACCAAAGACGGTCGCTGGTACCCGGAATTTTTCCGCATCAACTTCTCACGCTGCATTTTCTGTGGTCTGTGCGAAGAAGCCTGTCCGACCACGGCGATTCAGTTAACCCCGGATTTCGAAATGGGGGAATACAAGCGCCAGGATCTGGTTTACGAGAAAGAGGATCTGCTGATCTCCGGTCCGGGCAAATACCCGGAATATAACTTCTACCGGATGGCAGGTATGGCAATCGACGGCAAAGATAAGGGCGAAGCAGAGAACGAAGCCAAGCCTATCGACGTCAAGAGCCTGTTACCGTAA", + "dna_sequence_length": 543, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain I" + ], + "id": "CDS_2266", + "location": [ + [ + "NC_000913", + 2396450, + "-", + 543 + ] + ], + "md5": "f0c74724e758ae926d9ad6b159b1b199", + "parent_gene": "", + "protein_md5": "ae0700384201c95c88810a02dd3a21f9", + "protein_translation": "MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007541" + ], + [ + "gene_synonym", + "ECK2276" + ], + [ + "gene_synonym", + "EcoGene:EG12088" + ], + [ + "gene_synonym", + "GI:16130217" + ], + [ + "gene_synonym", + "GeneID:946761" + ], + [ + "gene_synonym", + "JW2277" + ], + [ + "gene_synonym", + "NP_416785.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFD4" + ], + [ + "gene_synonym", + "b2282" + ], + [ + "gene_synonym", + "nuoH" + ] + ], + "dna_sequence": "ATGAGTTGGATATCACCGGAACTGATTGAGATCCTGCTGACCATCCTCAAAGCGGTGGTGATCCTGCTGGTGGTTGTCACCTGCGGGGCATTCATGAGCTTTGGCGAACGTCGCCTGCTGGGTCTGTTCCAGAACCGTTACGGACCTAACCGTGTTGGCTGGGGCGGTTCGCTCCAGCTGGTTGCGGACATGATCAAAATGTTCTTTAAAGAAGACTGGATCCCGAAATTCTCGGATCGCGTCATCTTTACCCTGGCACCGATGATTGCCTTTACCTCGCTGCTGCTGGCCTTTGCGATTGTGCCAGTCAGTCCGGGTTGGGTGGTTGCCGACCTGAACATCGGGATTTTGTTCTTCCTGATGATGGCAGGTCTGGCGGTTTACGCGGTGCTGTTTGCGGGCTGGTCAAGTAACAACAAATACTCGTTGCTGGGTGCGATGCGTGCTTCTGCGCAGACCCTGAGCTACGAAGTGTTCCTCGGGCTTTCCTTGATGGGCGTGGTGGCGCAGGCCGGTTCATTCAACATGACCGACATCGTCAACAGCCAGGCGCATGTGTGGAACGTTATCCCGCAATTCTTTGGTTTTATTACCTTTGCCATCGCGGGCGTGGCGGTATGTCACCGTCACCCGTTTGACCAGCCGGAAGCCGAGCAGGAACTGGCGGATGGTTACCACATTGAATATTCCGGTATGAAGTTCGGTCTGTTCTTCGTGGGTGAGTACATCGGGATTGTGACCATCTCTGCATTGATGGTGACGCTGTTCTTCGGTGGCTGGCAAGGCCCGTTGTTACCGCCATTCATCTGGTTCGCGCTGAAAACCGCGTTCTTTATGATGATGTTCATTTTGATTCGTGCGTCGTTACCGCGTCCGCGTTATGACCAGGTAATGTCCTTCGGCTGGAAAATCTGCCTGCCGCTGACGCTGATCAACTTGCTGGTAACGGCGGCTGTCATTCTCTGGCAGGCGCAATAA", + "dna_sequence_length": 978, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit H" + ], + "id": "CDS_2267", + "location": [ + [ + "NC_000913", + 2397442, + "-", + 978 + ] + ], + "md5": "201a9d0531791923101d6b44b872daeb", + "parent_gene": "", + "protein_md5": "5e3d279c7a066adfaa3edd0db93e2633", + "protein_translation": "MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007543" + ], + [ + "gene_synonym", + "ECK2277" + ], + [ + "gene_synonym", + "EcoGene:EG12087" + ], + [ + "gene_synonym", + "GI:145698290" + ], + [ + "gene_synonym", + "GeneID:946762" + ], + [ + "gene_synonym", + "JW2278" + ], + [ + "gene_synonym", + "NP_416786.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33602" + ], + [ + "gene_synonym", + "b2283" + ], + [ + "gene_synonym", + "nuoG" + ] + ], + "dna_sequence": "ATGGCTACAATTCATGTAGACGGCAAAGAATACGAGGTCAACGGAGCGGACAACCTGCTGGAAGCTTGTCTGTCTCTGGGCCTTGATATTCCTTACTTTTGCTGGCATCCGGCGCTGGGAAGTGTCGGTGCTTGCCGCCAGTGTGCGGTGAAGCAATACCAAAACGCGGAAGACACGCGTGGTCGCCTGGTGATGTCCTGTATGACACCGGCTTCCGATGGCACCTTTATTTCCATTGACGACGAAGAAGCGAAACAGTTCCGTGAAAGCGTGGTCGAGTGGTTGATGACCAACCACCCGCACGACTGTCCGGTATGTGAAGAGGGCGGTAACTGCCATCTTCAGGATATGACTGTGATGACCGGACACAGCTTCCGTCGCTACCGTTTCACCAAACGTACCCACCGTAATCAGGATTTGGGGCCATTCATCTCTCACGAAATGAACCGCTGCATCGCCTGCTACCGCTGTGTGCGTTACTACAAAGATTACGCTGACGGTACAGATCTGGGCGTTTACGGTGCGCACGACAACGTCTACTTCGGTCGCCCGGAAGACGGCACGCTGGAAAGCGAATTTTCCGGTAACCTGGTCGAAATTTGCCCGACCGGCGTATTTACCGACAAAACGCACTCCGAGCGTTACAACCGTAAATGGGATATGCAGTTTGCGCCGAGCATCTGCCAGCAATGTTCCATCGGCTGTAACATCAGCCCCGGTGAACGTTACGGCGAACTGCGTCGTATCGAAAACCGTTACAACGGTACGGTAAACCACTACTTCCTCTGCGACCGTGGTCGTTTCGGTTACGGTTACGTCAACCTGAAGGATCGTCCGCGTCAGCCAGTACAGCGTCGTGGCGATGATTTCATTACCCTCAACGCCGAACAGGCAATGCAGGGCGCGGCAGATATTCTGCGTCAGTCGAAGAAAGTGATCGGTATTGGTTCTCCGCGTGCCAGCGTGGAAAGCAACTTTGCGCTGCGTGAACTGGTGGGCGAAGAAAACTTCTACACCGGTATCGCTCACGGTGAGCAGGAACGTCTGCAACTGGCGCTGAAAGTGCTGCGTGAAGGCGGCATTTATACTCCGGCTCTGCGCGAAATCGAATCTTACGATGCGGTACTGGTGCTGGGCGAAGACGTTACCCAGACCGGCGCGCGCGTCGCGCTGGCAGTGCGTCAGGCTGTGAAAGGTAAAGCGCGCGAAATGGCGGCAGCACAGAAAGTGGCTGACTGGCAGATTGCGGCAATCCTCAACATCGGTCAACGTGCGAAGCATCCGCTGTTTGTTACCAACGTTGATGACACCCGTCTGGATGATATCGCGGCGTGGACTTACCGCGCACCGGTTGAAGATCAGGCGCGTTTAGGTTTTGCCATCGCCCATGCGCTGGATAACTCTGCACCAGCGGTTGACGGTATCGAACCTGAGCTGCAAAGCAAAATCGACGTCATCGTGCAGGCACTGGCAGGTGCGAAGAAACCGTTGATTATCTCCGGGACGAACGCCGGTAGCTTAGAGGTGATTCAGGCGGCGGCTAACGTCGCGAAAGCCCTGAAAGGTCGCGGCGCTGACGTCGGTATCACCATGATTGCCCGTTCCGTCAACAGCATGGGGCTGGGCATTATGGGTGGCGGTTCGCTTGAAGAAGCGTTAACCGAACTGGAAACCGGACGCGCCGACGCGGTGGTGGTGTTGGAAAACGATCTGCATCGTCACGCTTCTGCTATCCGCGTGAATGCTGCGCTGGCTAAAGCACCGCTGGTGATGGTGGTTGATCATCAACGCACAGCGATTATGGAAAACGCCCATCTGGTACTTTCTGCTGCCAGCTTTGCTGAAAGCGACGGTACGGTGATCAACAACGAAGGCCGCGCCCAACGTTTCTTCCAGGTTTACGATCCTGCTTATTACGACAGCAAAACTGTCATGCTGGAAAGCTGGCGCTGGTTACACTCGCTGCACAGCACCCTGCTGAGCCGTGAAGTGGACTGGACGCAGCTCGACCATGTGATTGACGCTGTTGTGGCGAAAATCCCGGAACTGGCAGGTATCAAAGATGCTGCGCCGGATGCGACATTCCGTATTCGTGGGCAGAAACTGGCCCGTGAACCGCACCGTTACAGCGGTCGTACCGCCATGCGCGCCAATATCAGCGTTCATGAGCCGCGTCAGCCGCAGGATATTGACACCATGTTCACCTTCTCGATGGAAGGTAACAACCAGCCGACTGCGCACCGTTCGCAAGTGCCGTTTGCCTGGGCGCCGGGCTGGAACTCCCCGCAGGCGTGGAACAAATTCCAGGACGAAGTGGGCGGCAAACTGCGCTTTGGCGATCCGGGCGTGCGTCTGTTTGAAACCAGCGAAAATGGTCTGGATTACTTCACCAGCGTACCGGCACGCTTCCAGCCGCAGGACGGGAAATGGCGTATCGCGCCGTATTACCACCTGTTTGGCAGCGATGAATTGTCACAGCGTGCTCCGGTCTTCCAGAGCCGTATGCCGCAGCCGTACATCAAACTCAACCCAGCGGATGCCGCGAAGTTGGGTGTGAACGCAGGTACACGCGTCTCCTTTAGTTACGATGGCAACACGGTCACGCTGCCGGTTGAAATCGCCGAAGGACTGACGGCAGGGCAGGTGGGCTTGCCGATGGGTATGTCCGGCATTGCTCCGGTGCTGGCTGGCGCGCATCTTGAGGATCTCAAGGAGGCACAACAATGA", + "dna_sequence_length": 2727, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain G" + ], + "id": "CDS_2268", + "location": [ + [ + "NC_000913", + 2400165, + "-", + 2727 + ] + ], + "md5": "f3fa8ffa7ac68a8748dbce015def2278", + "parent_gene": "", + "protein_md5": "0a97130d8b9dad338086f6a9716d89d4", + "protein_translation": "MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASAIRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ", + "protein_translation_length": 908, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007545" + ], + [ + "gene_synonym", + "ECK2278" + ], + [ + "gene_synonym", + "EcoGene:EG11774" + ], + [ + "gene_synonym", + "GI:16130219" + ], + [ + "gene_synonym", + "GeneID:946753" + ], + [ + "gene_synonym", + "JW2279" + ], + [ + "gene_synonym", + "NP_416787.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31979" + ], + [ + "gene_synonym", + "b2284" + ], + [ + "gene_synonym", + "nuoB" + ], + [ + "gene_synonym", + "nuoF" + ] + ], + "dna_sequence": "ATGAAAAACATTATCCGTACTCCCGAAACGCATCCGCTGACCTGGCGTCTGCGCGATGACAAACAGCCAGTGTGGCTGGACGAATACCGCAGCAAAAACGGTTACGAAGGCGCGCGTAAGGCGCTGACCGGGCTGTCTCCGGACGAAATCGTTAATCAGGTAAAAGACGCTGGTCTGAAAGGGCGCGGCGGCGCGGGCTTCTCGACTGGCCTGAAATGGAGCCTGATGCCGAAAGACGAATCCATGAACATCCGTTACCTGCTGTGTAATGCCGATGAAATGGAGCCGGGCACCTATAAAGACCGCCTGTTGATGGAGCAACTGCCGCACCTGCTGGTGGAAGGTATGCTCATCTCCGCGTTTGCGCTGAAAGCTTACCGTGGCTACATCTTCCTGCGTGGCGAATATATCGAAGCGGCAGTTAATCTGCGCCGTGCCATTGCCGAAGCCACCGAAGCGGGTCTGCTTGGCAAAAACATTATGGGAACAGGTTTCGATTTCGAACTGTTCGTCCATACCGGGGCAGGGCGCTACATCTGCGGGGAAGAAACAGCGTTAATCAACTCCCTGGAAGGACGTCGTGCTAACCCACGCTCGAAGCCACCCTTCCCGGCAACCTCCGGCGCATGGGGTAAACCGACCTGTGTCAACAACGTCGAAACCCTGTGTAACGTTCCGGCGATCCTCGCTAACGGCGTGGAGTGGTATCAGAACATCTCGAAAAGTAAAGATGCTGGCACCAAGCTGATGGGCTTCTCCGGTCGGGTGAAAAATCCGGGACTGTGGGAACTGCCGTTCGGCACCACCGCACGCGAGATCCTCGAAGATTACGCCGGTGGTATGCGTGATGGTCTGAAATTTAAAGCCTGGCAGCCAGGCGGCGCGGGGACTGACTTCCTGACCGAAGCGCACCTTGATCTGCCGATGGAATTCGAAAGTATCGGTAAAGCGGGCAGCCGTCTGGGTACGGCGCTGGCGATGGCGGTTGACCATGAGATCAACATGGTGTCGCTGGTGCGTAACCTGGAAGAGTTTTTCGCCCGTGAGTCCTGCGGCTGGTGTACGCCGTGCCGCGACGGTCTGCCGTGGAGCGTGAAAATTCTGCGTGCGCTGGAGCGTGGTGAAGGTCAGCCGGGCGATATCGAAACACTTGAGCAACTGTGTCGATTCTTAGGCCCGGGTAAAACTTTCTGTGCCCACGCACCTGGTGCAGTGGAGCCGTTACAGAGCGCCATCAAATATTTCCGCGAAGAATTTGAGGCGGGAATCAAACAGCCGTTCAGCAATACCCATTTGATTAATGGGATTCAGCCGAACCTGCTGAAAGAGCGCTGGTAA", + "dna_sequence_length": 1338, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain F" + ], + "id": "CDS_2269", + "location": [ + [ + "NC_000913", + 2401555, + "-", + 1338 + ] + ], + "md5": "fef3fe2d3bcf8033b56f60b142f13d43", + "parent_gene": "", + "protein_md5": "8e3a7a12de0eea1970dd81e9f4ab2ff7", + "protein_translation": "MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007547" + ], + [ + "gene_synonym", + "ECK2279" + ], + [ + "gene_synonym", + "EcoGene:EG12086" + ], + [ + "gene_synonym", + "GI:16130220" + ], + [ + "gene_synonym", + "GeneID:946746" + ], + [ + "gene_synonym", + "JW2280" + ], + [ + "gene_synonym", + "NP_416788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFD1" + ], + [ + "gene_synonym", + "b2285" + ], + [ + "gene_synonym", + "nuoE" + ] + ], + "dna_sequence": "ATGCACGAGAATCAACAACCACAAACCGAGGCTTTTGAGCTGAGTGCGGCAGAGCGTGAAGCGATCGAGCACGAGATGCACCACTACGAAGACCCGCGTGCGGCGTCCATTGAAGCGCTGAAAATCGTTCAGAAGCAGCGTGGCTGGGTGCCGGATGGTGCGATCCACGCGATCGCCGATGTGCTGGGTATTCCGGCAAGCGACGTCGAAGGTGTGGCAACGTTCTACAGTCAGATCTTCCGCCAGCCGGTTGGTCGCCATGTGATCCGTTATTGTGACAGCGTGGTCTGTCATATCAACGGTTATCAGGGTATTCAGGCGGCGCTCGAGAAAAAGCTGAACATCAAACCAGGGCAAACGACATTTGATGGCCGCTTTACGCTGCTGCCAACTTGCTGCCTGGGGAACTGTGATAAAGGGCCAAACATGATGATCGATGAGGACACTCACGCGCATCTGACCCCGGAAGCGATCCCTGAACTGCTGGAGCGGTATAAATGA", + "dna_sequence_length": 501, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain E" + ], + "id": "CDS_2270", + "location": [ + [ + "NC_000913", + 2402052, + "-", + 501 + ] + ], + "md5": "8da56d6c06ae2f62478472a3eac894b8", + "parent_gene": "", + "protein_md5": "f71f2fb7813aea0d11f312f70d3c5464", + "protein_translation": "MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007549" + ], + [ + "gene_synonym", + "ECK2280" + ], + [ + "gene_synonym", + "EcoGene:EG12084" + ], + [ + "gene_synonym", + "GI:145698291" + ], + [ + "gene_synonym", + "GeneID:946759" + ], + [ + "gene_synonym", + "JW5375" + ], + [ + "gene_synonym", + "NP_416789.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33599" + ], + [ + "gene_synonym", + "b2286" + ], + [ + "gene_synonym", + "nuoC" + ], + [ + "gene_synonym", + "nuoCD" + ], + [ + "gene_synonym", + "nuoD" + ] + ], + "dna_sequence": "ATGACCGACTTAACCGCGCAAGAACCCGCCTGGCAGACCCGCGATCATCTTGATGATCCGGTGATTGGCGAACTGCGCAACCGTTTTGGGCCGGATGCCTTTACTGTTCAGGCGACTCGCACCGGGGTTCCCGTTGTGTGGATCAAGCGTGAACAATTACTGGAAGTTGGCGATTTCTTAAAGAAACTGCCGAAACCTTACGTCATGCTGTTTGACTTACACGGCATGGACGAACGTCTGCGCACACACCGCGAAGGGTTACCTGCCGCGGATTTTTCCGTTTTCTACCATCTGATTTCTATCGATCGTAACCGCGACATCATGCTGAAGGTGGCGCTGGCAGAAAACGACCTGCACGTACCGACCTTCACCAAACTGTTCCCGAACGCTAACTGGTATGAGCGTGAAACCTGGGATCTGTTTGGCATTACTTTCGACGGTCACCCGAACCTGCGACGCATCATGATGCCGCAAACCTGGAAAGGTCACCCGCTGCGTAAAGATTATCCGGCGCGCGCTACCGAATTCTCGCCGTTTGAGCTGACCAAAGCCAAACAGGATCTGGAGATGGAAGCCCTGACCTTCAAACCGGAAGAGTGGGGGATGAAGCGCGGCACCGAAAACGAGGACTTCATGTTCCTCAACCTCGGTCCGAACCACCCGTCGGCGCACGGGGCTTTCCGTATCGTTTTGCAACTCGATGGCGAAGAGATTGTCGACTGCGTACCAGACATCGGTTACCACCACCGTGGTGCGGAGAAAATGGGCGAACGCCAGTCCTGGCACAGCTACATTCCGTATACTGACCGTATCGAATACCTCGGCGGCTGCGTTAACGAAATGCCTTACGTGCTGGCGGTAGAGAAACTGGCCGGGATCACCGTGCCGGATCGCGTTAACGTCATTCGCGTTATGCTCTCCGAACTGTTCCGCATCAACAGTCACCTGCTGTATATCTCGACCTTTATTCAGGACGTCGGCGCAATGACGCCAGTGTTCTTCGCCTTTACCGATCGTCAGAAAATTTACGATCTGGTGGAAGCAATCACTGGTTTCCGTATGCACCCGGCGTGGTTCCGTATTGGCGGCGTAGCGCACGACCTGCCGCGCGGCTGGGATCGCCTGCTGCGTGAGTTCCTCGACTGGATGCCGAAACGTCTGGCGTCTTACGAGAAAGCGGCGCTGCAAAACACCATTCTGAAAGGTCGTTCCCAGGGCGTTGCCGCCTATGGCGCGAAAGAGGCGCTGGAGTGGGGCACCACTGGCGCGGGCCTGCGTGCTACCGGGATCGACTTCGACGTGCGTAAGGCGCGTCCTTATTCTGGCTATGAAAACTTCGACTTTGAAATCCCGGTGGGTGGTGGCGTTTCTGACTGCTACACCCGCGTAATGCTTAAAGTGGAAGAGCTGCGCCAGAGTCTGCGCATTCTTGAGCAGTGCCTCAACAACATGCCGGAAGGCCCGTTCAAAGCGGATCACCCGCTGACCACGCCGCCGCCGAAAGAGCGCACGCTGCAACATATCGAAACCCTGATCACCCACTTCCTGCAAGTGTCGTGGGGTCCGGTGATGCCTGCCAATGAATCTTTCCAGATGATTGAGGCGACCAAAGGGATCAACAGTTACTACCTGACCAGCGACGGCAGCACCATGAGTTACCGCACCCGTGTTCGTACCCCGAGCTTTGCGCATTTGCAGCAAATTCCGGCGGCGATCCGCGGCAGCCTGGTGTCTGACCTGATTGTTTATCTGGGCAGTATCGATTTTGTTATGTCAGATGTGGACCGCTAA", + "dna_sequence_length": 1791, + "functions": [ + "NADH:ubiquinone oxidoreductase, fused CD subunit" + ], + "id": "CDS_2271", + "location": [ + [ + "NC_000913", + 2403845, + "-", + 1791 + ] + ], + "md5": "fec0f27c28532f51ed2726321c5f6e63", + "parent_gene": "", + "protein_md5": "262dfcac448e9bfa418aad6589081358", + "protein_translation": "MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR", + "protein_translation_length": 596, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007551" + ], + [ + "gene_synonym", + "ECK2281" + ], + [ + "gene_synonym", + "EcoGene:EG12083" + ], + [ + "gene_synonym", + "GI:16130222" + ], + [ + "gene_synonym", + "GeneID:946738" + ], + [ + "gene_synonym", + "JW5875" + ], + [ + "gene_synonym", + "NP_416790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFC7" + ], + [ + "gene_synonym", + "b2287" + ], + [ + "gene_synonym", + "nuoB" + ] + ], + "dna_sequence": "ATGGATTATACGCTCACCCGCATAGATCCCAACGGTGAGAACGACCGTTACCCCCTGCAAAAGCAGGAGATCGTAACCGACCCTCTGGAGCAAGAAGTTAACAAAAACGTGTTTATGGGCAAGCTCAATGACATGGTTAACTGGGGTCGTAAAAACTCAATTTGGCCGTATAACTTCGGTCTTTCCTGCTGTTACGTTGAGATGGTGACTTCGTTTACCGCGGTGCATGACGTGGCGCGTTTTGGCGCAGAAGTATTGCGTGCTTCGCCGCGTCAGGCTGACCTGATGGTGGTTGCAGGAACCTGCTTTACCAAAATGGCACCGGTTATTCAGCGTCTGTATGACCAGATGCTGGAACCAAAATGGGTTATCTCAATGGGTGCCTGTGCCAACTCTGGTGGTATGTACGATATTTATTCCGTTGTGCAGGGCGTCGATAAATTCATCCCGGTTGATGTGTATATCCCGGGCTGCCCGCCGCGTCCTGAAGCGTACATGCAGGCACTGATGCTGTTGCAGGAATCTATCGGCAAAGAACGTCGTCCGCTCTCCTGGGTGGTTGGCGATCAGGGCGTTTATCGCGCCAATATGCAATCAGAGCGCGAACGCAAGCGCGGTGAACGCATTGCCGTAACTAACCTGCGTACACCTGACGAGATTTAA", + "dna_sequence_length": 663, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain B" + ], + "id": "CDS_2272", + "location": [ + [ + "NC_000913", + 2404613, + "-", + 663 + ] + ], + "md5": "8d62840e509397bb6aeacc89b95e67c9", + "parent_gene": "", + "protein_md5": "f9cf5ef975a24d6cd284ebce2bd80383", + "protein_translation": "MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007553" + ], + [ + "gene_synonym", + "ECK2282" + ], + [ + "gene_synonym", + "EcoGene:EG12082" + ], + [ + "gene_synonym", + "GI:49176207" + ], + [ + "gene_synonym", + "GeneID:946764" + ], + [ + "gene_synonym", + "JW2283" + ], + [ + "gene_synonym", + "NP_416791.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFC3" + ], + [ + "gene_synonym", + "b2288" + ], + [ + "gene_synonym", + "nuoA" + ] + ], + "dna_sequence": "ATGAGTATGTCAACATCCACTGAAGTCATCGCTCATCACTGGGCATTCGCTATCTTTCTTATCGTTGCCATTGGCCTGTGTTGCCTGATGCTGGTAGGCGGTTGGTTTTTAGGCGGTCGCGCACGCGCGAGGTCGAAAAACGTGCCGTTTGAATCCGGTATCGACTCGGTCGGCTCCGCCCGCTTACGCCTGTCCGCCAAGTTTTATCTGGTGGCCATGTTCTTCGTTATCTTCGACGTTGAAGCGCTGTATCTGTTCGCATGGTCAACCTCTATCCGCGAAAGCGGCTGGGTAGGCTTTGTGGAAGCTGCAATTTTTATTTTTGTGTTACTGGCAGGTCTGGTTTATCTGGTGCGTATTGGCGCGCTGGACTGGACGCCCGCGCGTTCACGCCGCGAGCGTATGAACCCGGAAACGAACAGTATCGCTAATCGTCAACGCTAA", + "dna_sequence_length": 444, + "functions": [ + "NADH:ubiquinone oxidoreductase, membrane subunit A" + ], + "id": "CDS_2273", + "location": [ + [ + "NC_000913", + 2405072, + "-", + 444 + ] + ], + "md5": "80f5e67ff72523ab515c8588114719b7", + "parent_gene": "", + "protein_md5": "3196ce19e8d8d88083060387212e6a7a", + "protein_translation": "MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007555" + ], + [ + "gene_synonym", + "ECK2283" + ], + [ + "gene_synonym", + "EcoGene:EG12123" + ], + [ + "gene_synonym", + "GI:16130224" + ], + [ + "gene_synonym", + "GeneID:946769" + ], + [ + "gene_synonym", + "JW2284" + ], + [ + "gene_synonym", + "NP_416792.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36771" + ], + [ + "gene_synonym", + "b2289" + ], + [ + "gene_synonym", + "genR" + ], + [ + "gene_synonym", + "hexA" + ], + [ + "gene_synonym", + "lrhA" + ] + ], + "dna_sequence": "ATGATAAGTGCAAATCGTCCGATAATTAACCTCGACCTCGATCTGCTGAGAACATTTGTTGCTGTTGCCGATCTGAACACTTTTGCTGCCGCAGCTGCCGCTGTGTGTCGTACTCAGTCCGCCGTAAGTCAGCAAATGCAGCGTCTGGAACAACTCGTTGGGAAAGAACTGTTCGCTCGTCACGGTCGCAACAAACTGTTAACTGAACATGGCATTCAACTTCTTGGTTACGCCAGGAAAATCCTGCGTTTTAATGATGAGGCCTGCTCATCATTAATGTTCAGTAATCTTCAGGGCGTATTAACTATCGGTGCTTCAGATGAATCTGCCGATACGATCTTACCTTTCCTGTTAAATCGCGTGAGTTCGGTTTATCCGAAATTAGCGCTGGATGTCCGCGTTAAACGTAATGCCTATATGGCAGAAATGCTGGAATCCCAGGAAGTGGATTTGATGGTAACCACCCATCGTCCTTCAGCGTTTAAGGCATTGAACCTGCGTACCTCGCCAACACACTGGTACTGCGCAGCGGAATACATATTGCAAAAAGGCGAGCCGATCCCTCTTGTATTGCTGGATGATCCTAGCCCGTTTCGCGATATGGTGCTGGCGACGCTTAATAAAGCAGATATTCCATGGCGACTGGCTTATGTCGCCTCGACGCTTCCGGCCGTTCGTGCGGCAGTGAAAGCCGGTCTTGGCGTGACGGCAAGGCCGGTTGAGATGATGAGCCCGGACCTGCGTGTGCTGAGTGGAGTAGATGGCTTACCGCCGCTACCTGATACCGAATATTTGCTGTGCTATGATCCGTCCAGTAATAATGAGCTGGCCCAGGTGATCTATCAGGCGATGGAGAGCTACCATAATCCGTGGCAATACAGCCCAATGTCTGCTCCGGAAGGGGATGATTCATTGTTGATTGAAAGGGATATCGAGTAA", + "dna_sequence_length": 939, + "functions": [ + "transcriptional repressor of flagellar, motility and chemotaxis genes" + ], + "id": "CDS_2274", + "location": [ + [ + "NC_000913", + 2406641, + "-", + 939 + ] + ], + "md5": "0e782a8bb69cd277e33b6eb95b556458", + "parent_gene": "", + "protein_md5": "a845babf7dbfe03608d3270332b0e9a4", + "protein_translation": "MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007560" + ], + [ + "gene_synonym", + "ECK2284" + ], + [ + "gene_synonym", + "EcoGene:EG14101" + ], + [ + "gene_synonym", + "GI:16130225" + ], + [ + "gene_synonym", + "GeneID:946772" + ], + [ + "gene_synonym", + "JW2287" + ], + [ + "gene_synonym", + "NP_416793.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A959" + ], + [ + "gene_synonym", + "alaA" + ], + [ + "gene_synonym", + "b2290" + ], + [ + "gene_synonym", + "yfbQ" + ] + ], + "dna_sequence": "ATGTCCCCCATTGAAAAATCCAGCAAATTAGAGAATGTCTGTTATGACATCCGTGGTCCGGTGCTGAAAGAAGCAAAACGCCTGGAAGAAGAAGGTAACAAGGTACTGAAACTGAACATCGGCAACCCAGCCCCGTTCGGTTTTGACGCGCCAGATGAAATCCTCGTTGACGTGATACGCAACCTGCCTACCGCTCAAGGGTATTGCGATTCCAAAGGTCTTTACTCCGCGCGTAAAGCCATCATGCAGCACTACCAGGCTCGTGGCATGCGTGATGTTACCGTGGAAGATATTTACATCGGCAATGGTGTATCGGAGCTTATCGTTCAGGCAATGCAGGCATTGCTGAACAGCGGGGACGAAATGTTGGTTCCTGCACCAGATTACCCACTCTGGACCGCGGCGGTTTCGCTTTCCAGCGGTAAAGCGGTGCATTATCTTTGCGATGAATCCTCTGACTGGTTCCCGGACCTCGATGATATTCGCGCTAAAATTACGCCTCGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGGCGCGGTATATTCCAAAGAGCTTTTAATGGAGATTGTGGAGATTGCACGTCAGCATAATCTCATTATCTTCGCCGATGAAATTTATGACAAAATTCTCTACGACGACGCTGAGCATCACTCAATTGCGCCGCTGGCACCTGACCTGCTGACCATTACCTTTAACGGACTGTCGAAAACGTACCGCGTTGCAGGCTTCCGTCAGGGGTGGATGGTGTTGAACGGGCCGAAAAAACACGCCAAAGGCTACATCGAAGGTCTGGAAATGCTGGCTTCAATGCGCCTGTGTGCTAACGTTCCTGCGCAACACGCCATTCAGACCGCGCTAGGTGGTTATCAGAGCATCAGTGAATTTATTACCCCTGGCGGTCGTCTTTATGAGCAGCGTAACCGCGCGTGGGAACTGATCAACGATATTCCGGGCGTTTCCTGCGTGAAACCTCGTGGTGCGCTGTATATGTTCCCGAAAATCGACGCCAAACGCTTTAACATTCACGACGATCAGAAAATGGTGTTGGATTTCCTGTTGCAGGAAAAAGTTCTGTTGGTGCAAGGGACGGCATTCAACTGGCCGTGGCCGGATCACTTCCGCATTGTCACGCTACCGCGTGTCGATGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAA", + "dna_sequence_length": 1218, + "functions": [ + "glutamate-pyruvate aminotransferase", + "glutamic-pyruvic transaminase (GPT)", + "alanine transaminase" + ], + "id": "CDS_2275", + "location": [ + [ + "NC_000913", + 2407561, + "+", + 1218 + ] + ], + "md5": "8a5945d48cf58d750b97c902107c8bab", + "parent_gene": "", + "protein_md5": "f90d60219db6a32804d897d57c9f691e", + "protein_translation": "MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007563" + ], + [ + "gene_synonym", + "ECK2285" + ], + [ + "gene_synonym", + "EcoGene:EG14102" + ], + [ + "gene_synonym", + "GI:16130226" + ], + [ + "gene_synonym", + "GeneID:946771" + ], + [ + "gene_synonym", + "JW2288" + ], + [ + "gene_synonym", + "NP_416794.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76491" + ], + [ + "gene_synonym", + "b2291" + ], + [ + "gene_synonym", + "yfbR" + ] + ], + "dna_sequence": "ATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAACTCATTAACCGCTGGCCGCTCATGCGCAACGTGCGGACGGAAAATGTGTCCGAACACAGTTTGCAGGTAGCGATGGTCGCCCATGCGCTGGCAGCTATCAAAAATCGAAAATTTGGCGGTAATGTCAACGCCGAACGTATCGCTTTACTGGCGATGTACCACGATGCCTCAGAAGTGCTCACCGGCGATCTCCCTACTCCGGTGAAATACTTCAATTCGCAAATCGCTCAGGAGTACAAGGCTATTGAAAAAATCGCTCAGCAAAAACTGGTCGATATGGTTCCGGAAGAGCTGCGGGATATCTTTGCGCCGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCATGGAAATATTTGTTCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAA", + "dna_sequence_length": 600, + "functions": [ + "5'-nucleotidase" + ], + "id": "CDS_2276", + "location": [ + [ + "NC_000913", + 2408862, + "+", + 600 + ] + ], + "md5": "08d18fb0422eaa7cf4bda0aee467e787", + "parent_gene": "", + "protein_md5": "c76d5062861d24b3c113f7ddbf8a0690", + "protein_translation": "MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007565" + ], + [ + "gene_synonym", + "ECK2286" + ], + [ + "gene_synonym", + "EcoGene:EG14103" + ], + [ + "gene_synonym", + "GI:16130227" + ], + [ + "gene_synonym", + "GeneID:946766" + ], + [ + "gene_synonym", + "JW2289" + ], + [ + "gene_synonym", + "NP_416795.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU2" + ], + [ + "gene_synonym", + "b2292" + ], + [ + "gene_synonym", + "yfbS" + ] + ], + "dna_sequence": "GTGAACGGTGAATTGATTTGGGTTCTTTCATTACTGGCCGTTGCCATCGTCTTGTTTGCGACGGGCAGAGTGCGTATGGATGCGGTCGCTTTGTTTGTTATTGTCGCGTTTGCATTAAGCGGAACGCTGACAGTCCCAGAAGTATTTTCCGGCTTTTCTGATCCTAACGTTGTCCTGATTGCCGCCTTGTTTATTATTGGCGATGGTTTGGTCCGTACCGGTGTTGCCACCGTAATGGGAACATGGCTGGTCAAAGTTGCGGGCAATAGTGAAATCAAAATGTTGGTTTTGTTGATGCTGACCGTCGCGGGGCTTGGCGCGTTTATGAGTTCAACCGGCGTTGTCGCTATCTTTATTCCCGTGGTGTTAAGCGTTGCCATGCGTATGCAAACGTCGCCGTCACGTCTGATGATGCCGTTAAGTTTTGCCGGGCTGATTAGCGGCATGATGACGCTGGTGGCGACGCCGCCGAACCTGGTAGTCAACAGTGAATTGCTGCGTGAAGGCTATCACGGCTTCAGTTTCTTTAGCGTAACACCTATTGGCCTGGTCGTGCTGGTGCTGGGTATTTTGTATATGTTAGTGATGCGTTTCATGCTGAAAGGGGATACCCAGACCCCGCAGCGCGAAGGCTGGACGCGTCGAACCTTTCGCGATCTTATCCGTGAATATCGACTGACCGGGCGTGCGCGACGTCTGGCTATTCGCCCCGGATCGCCAATGATTGGTCAACGGCTGGATGATCTCAAATTACGTGAGCGTTATGGCGCTAACGTCATCGGTGTTGAACGCTGGCGGCGTTTTCGTCGCGTTATCGTGAACGTTAATGGGGTTTCTGAATTTCGCGCGCGTGACGTTTTGCTTATTGATATGTCTGCGGCTGATGTCGATCTCCGGCAATTTTGTAGTGAGCAATTGCTGGAGCCGATGGTACTGCGCGGCGAGTATTTTTCTGACCAGGCCCTTGATGTGGGCATGGCAGAGATTTCATTAATTCCTGAGTCAGAACTGATTGGTAAATCGGTGCGCGAAATTGGTTTTCGTACCCGCTACGGACTGAATGTGGTGGGGCTAAAGCGCAATGGCGTGGCGCTGGAAGGTTCGCTGGCGGATGAGCCTCTGCTGCTGGGCGATATCATCCTGGTTGTGGGTAACTGGAAACTGATCGGTATGCTGGCCAAACAGGGCCGCGACTTCGTAGCGCTGAACTTACCGGAAGAGGTGAGTGAAGCATCACCCGCGCACAGCCAGGCACCCCATGCCATTTTCTGTCTGGTGCTAATGGTGGCGTTAATGCTGACAGATGAAATTCCTAATCCTGTTGCCGCTATCATCGCCTGCCTGCTGATGGGGAAATTCCGCTGTATAGATGCTGAAAGCGCCTATAAATCCATTCACTGGCCGAGCATTATTTTGATCGTTGGGATGATGCCGTTTGCTGTGGCATTACAGAAAACGGGAGGTGTCGCGCTGGCGGTGAAAGGGCTGATGGACATTGGCGGTGGTTACGGGCCACATATGATGCTGGGGTGTTTGTTTGTCTTGTCGGCGGTTATTGGGCTATTTATCTCTAATACCGCGACGGCGGTGTTGATGGCTCCGATTGCGCTGGCTGCTGCCAAAACGATGGGGGTGTCGCCTTATCCATTCGCGATGGTCGTGGCGATGGCAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTACAGCTTCAGTGACTTTGTGAAGTTGGGGGTACCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGA", + "dna_sequence_length": 1833, + "functions": [ + "putative transporter" + ], + "id": "CDS_2277", + "location": [ + [ + "NC_000913", + 2411352, + "-", + 1833 + ] + ], + "md5": "e0746d79b6b718ed179011f1b9f72d0d", + "parent_gene": "", + "protein_md5": "10298ea5d21948c62a550a04175db979", + "protein_translation": "MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFRDLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGMLAKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF", + "protein_translation_length": 610, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007567" + ], + [ + "gene_synonym", + "ECK2287" + ], + [ + "gene_synonym", + "EcoGene:EG14104" + ], + [ + "gene_synonym", + "GI:90111414" + ], + [ + "gene_synonym", + "GeneID:946777" + ], + [ + "gene_synonym", + "JW5376" + ], + [ + "gene_synonym", + "NP_416796.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77625" + ], + [ + "gene_synonym", + "b2293" + ], + [ + "gene_synonym", + "yfbT" + ] + ], + "dna_sequence": "GTGCGGTGCAAAGGTTTTCTGTTTGATCTTGATGGAACGCTGGTGGATTCCCTGCCTGCGGTAGAACGGGCGTGGAGCAACTGGGCCAGACGTCATGGGTTAGCGCCGGAAGAGGTGCTGGCTTTCATTCACGGTAAACAGGCGATCACCTCTCTGCGCCATTTTATGGCGGGCAAATCCGAGGCTGATATTGCCGCCGAGTTTACGCGTCTGGAGCACATCGAGGCCACGGAAACCGAAGGTATTACCGCGCTTCCGGGGGCAATCGCCTTACTCAGTCATTTGAATAAAGCAGGTATTCCGTGGGCCATTGTGACTTCTGGCTCCATGCCGGTAGCGCGAGCGCGCCATAAAATAGCTGGGCTTCCCGCACCAGAGGTGTTTGTAACCGCTGAGCGAGTGAAGCGCGGAAAACCAGAACCTGATGCGTATCTGTTAGGCGCGCAGCTGCTGGGGCTTGCGCCGCAGGAGTGTGTGGTGGTGGAAGATGCTCCCGCTGGCGTGCTTTCTGGCCTGGCGGCGGGTTGTCATGTCATTGCGGTTAACGCTCCGGCAGATACCCCGCGCCTGAATGAGGTCGATTTGGTCCTCCACAGTCTGGAGCAAATTACTGTGACCAAACAGCCAAATGGCGATGTTATTATTCAGTGA", + "dna_sequence_length": 651, + "functions": [ + "sugar phosphatas" + ], + "id": "CDS_2278", + "location": [ + [ + "NC_000913", + 2412089, + "-", + 651 + ] + ], + "md5": "dc24c10b8fa0f062a54c5115f5ff2a6a", + "parent_gene": "", + "protein_md5": "eec6eb45a4899fa519a2d1c34e242de1", + "protein_translation": "MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETEGITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007571" + ], + [ + "gene_synonym", + "ECK2288" + ], + [ + "gene_synonym", + "EcoGene:EG14105" + ], + [ + "gene_synonym", + "GI:90111415" + ], + [ + "gene_synonym", + "GeneID:946767" + ], + [ + "gene_synonym", + "JW2291" + ], + [ + "gene_synonym", + "NP_416797.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8W8" + ], + [ + "gene_synonym", + "b2294" + ], + [ + "gene_synonym", + "yfbU" + ] + ], + "dna_sequence": "ATGGAAATGACCAACGCGCAACGTCTTATTTTGTCTAATCAGTACAAGATGATGACTATGCTCGATCCGGCAAATGCTGAACGTTACCGTCGCCTGCAAACAATTATTGAGCGTGGTTACGGATTACAGATGCGTGAATTGGATCGCGAGTTTGGCGAGCTGAAAGAAGAAACCTGCCGCACTATCATCGACATTATGGAGATGTATCATGCGTTGCATGTTTCCTGGTCTAATTTGCAGGACCAGCAATCCATCGATGAACGTCGTGTCACCTTCCTCGGCTTTGACGCCGCCACTGAAGCACGTTACCTCGGTTATGTCCGCTTTATGGTTAATGTGGAAGGGCGCTATACCCATTTTGACGCCGGAACTCACGGTTTTAACGCCCAGACGCCAATGTGGGAAAAATATCAGCGCATGCTTAATGTGTGGCATGCCTGCCCGCGTCAGTACCATTTGAGCGCCAACGAAATTAATCAAATTATCAATGCCTGA", + "dna_sequence_length": 495, + "functions": [ + "UPF0304 family protein" + ], + "id": "CDS_2279", + "location": [ + [ + "NC_000913", + 2412594, + "-", + 495 + ] + ], + "md5": "88e2376d0ad912c9e31e8e7f3105d0f5", + "parent_gene": "", + "protein_md5": "686577aac277f737d875fe198ea6460a", + "protein_translation": "MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQMRELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIINA", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007575" + ], + [ + "gene_synonym", + "ECK2289" + ], + [ + "gene_synonym", + "EcoGene:EG14106" + ], + [ + "gene_synonym", + "GI:16130230" + ], + [ + "gene_synonym", + "GeneID:946774" + ], + [ + "gene_synonym", + "JW2292" + ], + [ + "gene_synonym", + "NP_416798.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8D9" + ], + [ + "gene_synonym", + "b2295" + ], + [ + "gene_synonym", + "yfbV" + ] + ], + "dna_sequence": "ATGTCAACGCCGGATAATCGTTCTGTTAATTTTTTTAGCTTGTTTCGCCGGGGACAGCATTACTCAAAGACGTGGCCGCTGGAAAAACGCCTTGCCCCGGTCTTTGTCGAAAATCGCGTTATCAAGATGACGCGTTATGCGATCCGTTTTATGCCGCCGATCGCCGTATTTACTCTCTGCTGGCAGATTGCCCTGGGCGGTCAGCTTGGGCCGGCAGTTGCCACTGCCCTGTTCGCCTTAAGTTTACCCATGCAGGGATTGTGGTGGCTGGGCAAGCGTTCTGTCACGCCATTACCCCCTGCAATCCTTAACTGGTTTTATGAAGTTCGCGGTAAATTGCAGGAGTCTGGACAGGTGTTGGCACCCGTTGAAGGCAAGCCTGATTACCAGGCATTAGCTGACACGCTTAAGCGCGCCTTCAAACAACTGGATAAAACTTTCCTTGATGATTTGTAA", + "dna_sequence_length": 456, + "functions": [ + "UPF0208 family inner membrane protein" + ], + "id": "CDS_2280", + "location": [ + [ + "NC_000913", + 2413132, + "-", + 456 + ] + ], + "md5": "c546c0a31edd1e7fc686967c83ded1f2", + "parent_gene": "", + "protein_md5": "957393d58ba08f00c4dc8206d69808a0", + "protein_translation": "MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007579" + ], + [ + "gene_synonym", + "ECK2290" + ], + [ + "gene_synonym", + "EcoGene:EG10027" + ], + [ + "gene_synonym", + "GI:16130231" + ], + [ + "gene_synonym", + "GeneID:946775" + ], + [ + "gene_synonym", + "JW2293" + ], + [ + "gene_synonym", + "NP_416799.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6A3" + ], + [ + "gene_synonym", + "ackA" + ], + [ + "gene_synonym", + "b2296" + ] + ], + "dna_sequence": "ATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGACGGCAATAAACAGGAAGCGGCTTTAGGTGCAGGCGCCGCTCACAGCGAAGCGCTCAACTTTATCGTTAATACTATTCTGGCACAAAAACCAGAACTGTCTGCGCAGCTGACTGCTATCGGTCACCGTATCGTACACGGCGGCGAAAAGTATACCAGCTCCGTAGTGATCGATGAGTCTGTTATTCAGGGTATCAAAGATGCAGCTTCTTTTGCACCGCTGCACAACCCGGCTCACCTGATCGGTATCGAAGAAGCTCTGAAATCTTTCCCACAGCTGAAAGACAAAAACGTTGCTGTATTTGACACCGCGTTCCACCAGACTATGCCGGAAGAGTCTTACCTCTACGCCCTGCCTTACAACCTGTACAAAGAGCACGGCATCCGTCGTTACGGCGCGCACGGCACCAGCCACTTCTATGTAACCCAGGAAGCGGCAAAAATGCTGAACAAACCGGTAGAAGAACTGAACATCATCACCTGCCACCTGGGCAACGGTGGTTCCGTTTCTGCTATCCGCAACGGTAAATGCGTTGACACCTCTATGGGCCTGACCCCGCTGGAAGGTCTGGTCATGGGTACCCGTTCTGGTGATATCGATCCGGCGATCATCTTCCACCTGCACGACACCCTGGGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGA", + "dna_sequence_length": 1203, + "functions": [ + "acetate kinase A and propionate kinase 2" + ], + "id": "CDS_2281", + "location": [ + [ + "NC_000913", + 2413470, + "+", + 1203 + ] + ], + "md5": "713b78a38d08b51a9c06eb5a531d372a", + "parent_gene": "", + "protein_md5": "d3380e9e3ca970d9dfbed22064b59906", + "protein_translation": "MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARIKWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLTA", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007582" + ], + [ + "gene_synonym", + "ECK2291" + ], + [ + "gene_synonym", + "EcoGene:EG20173" + ], + [ + "gene_synonym", + "GI:16130232" + ], + [ + "gene_synonym", + "GeneID:946778" + ], + [ + "gene_synonym", + "JW2294" + ], + [ + "gene_synonym", + "NP_416800.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9M8" + ], + [ + "gene_synonym", + "b2297" + ], + [ + "gene_synonym", + "pta" + ] + ], + "dna_sequence": "GTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGTGCAATGGAACGCAAAGGCGTTCGTCTGAGCGTTTTCAAACCTATCGCTCAGCCGCGTACCGGTGGCGATGCGCCCGATCAGACTACGACTATCGTGCGTGCGAACTCTTCCACCACGACGGCCGCTGAACCGCTGAAAATGAGCTACGTTGAAGGTCTGCTTTCCAGCAATCAGAAAGATGTGCTGATGGAAGAGATCGTCGCAAACTACCACGCTAACACCAAAGACGCTGAAGTCGTTCTGGTTGAAGGTCTGGTCCCGACACGTAAGCACCAGTTTGCCCAGTCTCTGAACTACGAAATCGCTAAAACGCTGAATGCGGAAATCGTCTTCGTTATGTCTCAGGGCACTGACACCCCGGAACAGCTGAAAGAGCGTATCGAACTGACCCGCAACAGCTTCGGCGGTGCCAAAAACACCAACATCACCGGCGTTATCGTTAACAAACTGAACGCACCGGTTGATGAACAGGGTCGTACTCGCCCGGATCTGTCCGAGATTTTCGACGACTCTTCCAAAGCTAAAGTAAACAATGTTGATCCGGCGAAGCTGCAAGAATCCAGCCCGCTGCCGGTTCTCGGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTCCGCAGACCGTCCTGACGTGCTGGTGGCCGCTTGCCTGGCAGCCATGAACGGCGTAGAAATCGGTGCCCTGCTGCTGACTGGCGGTTACGAAATGGACGCGCGCATTTCTAAACTGTGCGAACGTGCTTTCGCTACCGGCCTGCCGGTATTTATGGTGAACACCAACACCTGGCAGACCTCTCTGAGCCTGCAGAGCTTCAACCTGGAAGTTCCGGTTGACGATCACGAACGTATCGAGAAAGTTCAGGAATACGTTGCTAACTACATCAACGCTGACTGGATCGAATCTCTGACTGCCACTTCTGAGCGCAGCCGTCGTCTGTCTCCGCCTGCGTTCCGTTATCAGCTGACTGAACTTGCGCGCAAAGCGGGCAAACGTATCGTACTGCCGGAAGGTGACGAACCGCGTACCGTTAAAGCAGCCGCTATCTGTGCTGAACGTGGTATCGCAACTTGCGTACTGCTGGGTAATCCGGCAGAGATCAACCGTGTTGCAGCGTCTCAGGGTGTAGAACTGGGTGCAGGGATTGAAATCGTTGATCCAGAAGTGGTTCGCGAAAGCTATGTTGGTCGTCTGGTCGAACTGCGTAAGAACAAAGGCATGACCGAAACCGTTGCCCGCGAACAGCTGGAAGACAACGTGGTGCTCGGTACGCTGATGCTGGAACAGGATGAAGTTGATGGTCTGGTTTCCGGTGCTGTTCACACTACCGCAAACACCATCCGTCCGCCGCTGCAGCTGATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCGGATCCGACCGCTGAACAGCTGGCAGAAATCGCGATTCAGTCCGCTGATTCCGCTGCGGCCTTCGGTATCGAACCGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGCAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACAGCGTTCTGCCGACCTGATCTCCATCGGGCCGATGCTGCAGGGTATGCGCAAGCCGGTTAACGACCTGTCCCGTGGCGCACTGGTTGACGATATCGTCTACACCATCGCGCTGACTGCGATTCAGTCTGCACAGCAGCAGTAA", + "dna_sequence_length": 2145, + "functions": [ + "phosphate acetyltransferase" + ], + "id": "CDS_2282", + "location": [ + [ + "NC_000913", + 2414747, + "+", + 2145 + ] + ], + "md5": "074dd037c18646d5f7acc00bf9440fae", + "parent_gene": "", + "protein_md5": "278f5526d165d87c69bbf3981199b3ac", + "protein_translation": "MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ", + "protein_translation_length": 714, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007585" + ], + [ + "gene_synonym", + "ECK2292" + ], + [ + "gene_synonym", + "EcoGene:EG12607" + ], + [ + "gene_synonym", + "GI:90111416" + ], + [ + "gene_synonym", + "GeneID:946780" + ], + [ + "gene_synonym", + "JW2295" + ], + [ + "gene_synonym", + "NP_416801.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39263" + ], + [ + "gene_synonym", + "b2298" + ], + [ + "gene_synonym", + "yfcC" + ] + ], + "dna_sequence": "ATGTCCGCAATCACTGAATCCAAACCAACAAGAAGATGGGCAATGCCCGATACGTTGGTGATTATCTTTTTTGTTGCTATTTTAACCAGCCTTGCCACCTGGGTAGTTCCGGTGGGGATGTTTGACAGTCAGGAAGTGCAGTATCAGGTTGATGGTCAAACAAAAACACGCAAAGTCGTAGATCCACACTCATTTCGCATTCTGACTAACGAAGCAGGCGAACCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGATCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCATTGATAACGGTATCCTGGCGCTTATTCGCCATACCCGCGGGAATGAAATTCTCTTTATTCCTGCGCTGTTTATTCTGTTTTCACTTGGCGGCGCGGTATTTGGTATGGGAGAAGAGGCCGTCGCCTTTGCCATTATCATCGCACCGCTAATGGTCCGGCTGGGCTATGACAGTATTACCACCGTCCTGGTGACCTATATTGCCACGCAAATCGGTTTTGCCAGTTCGTGGATGAACCCGTTTTGTGTGGTCGTTGCTCAGGGGATTGCCGGCGTTCCGGTGCTTTCTGGCTCCGGGTTGCGCATCGTGGTGTGGGTTATCGCCACTCTGATTGGCCTGATCTTTACCATGGTGTACGCCTCACGAGTGAAAAAGAATCCTCTTCTGTCACGCGTGCATGAGTCCGACCGCTTCTTTCGTGAAAAGCAGGCTGATGTTGAACAACGTCCGTTTACCTTTGGTGACTGGCTGGTATTGATTGTCCTGACCGCCGTAATGGTCTGGGTGATTTGGGGCGTGATCGTTAATGCCTGGTTTATTCCAGAAATTGCCAGCCAGTTCTTCACCATGGGTCTGGTGATTGGCATCATCGGCGTTGTTTTCCGCCTTAACGGCATGACGGTTAATACCATGGCTTCATCCTTTACCGAAGGGGCGCGAATGATGATCGCCCCTGCCCTGCTGGTGGGTTTCGCCAAAGGGATTTTGCTGCTGGTCGGTAATGGTGAAGCGGGTGATGCCAGCGTGTTAAATACCATCCTCAACAGCATTGCCAATGCCATTAGCGGTCTGGACAACGCGGTCGCGGCCTGGTTTATGTTGCTCTTCCAGGCGGTATTTAATTTCTTCGTGACGTCCGGTTCTGGTCAGGCGGCGTTAACCATGCCGTTACTGGCACCGCTTGGCGATCTGGTCGGTGTTAACCGTCAGGTTACCGTGCTGGCGTTCCAGTTTGGTGATGGCTTCAGTCACATCATTTACCCAACCTCAGCGTCGTTAATGGCAACGCTCGGTGTGTGCAGGGTGGACTTCCGTAACTGGCTGAAGGTGGGCGCGACCCTACTTGGACTGCTGTTTATTATGTCCAGCGTCGTAGTGATCGGCGCTCAGTTGATGGGCTACCACTAA", + "dna_sequence_length": 1521, + "functions": [ + "putative inner membrane transporter", + "C4-dicarboxylate anaerobic carrier family protein" + ], + "id": "CDS_2283", + "location": [ + [ + "NC_000913", + 2417081, + "+", + 1521 + ] + ], + "md5": "7bd8cb8ee315f0a1d003d21cac606394", + "parent_gene": "", + "protein_md5": "74cb2e4ad26a58ae7d690fcd8db285bc", + "protein_translation": "MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIATLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007587" + ], + [ + "gene_synonym", + "ECK2293" + ], + [ + "gene_synonym", + "EcoGene:EG14107" + ], + [ + "gene_synonym", + "GI:16130234" + ], + [ + "gene_synonym", + "GeneID:946783" + ], + [ + "gene_synonym", + "JW2296" + ], + [ + "gene_synonym", + "NP_416802.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65556" + ], + [ + "gene_synonym", + "b2299" + ], + [ + "gene_synonym", + "yfcD" + ] + ], + "dna_sequence": "ATGGAACAGCGTCGTTTGGCAAGTACTGAATGGGTGGATATTGTCAATGAAGAGAACGAAGTCATTGCACAAGCCAGCCGGGAACAAATGCGGGCACAGTGTCTGCGTCATCGTGCAACTTACATCGTCGTGCATGATGGCATGGGCAAAATTCTGGTCCAGCGTCGTACCGAGACAAAAGACTTTTTACCCGGCATGTTAGATGCGACCGCAGGCGGTGTAGTCCAGGCCGATGAGCAACTGCTGGAATCCGCGCGTCGCGAAGCGGAAGAAGAGTTGGGCATTGCCGGTGTCCCCTTTGCCGAGCACGGGCAGTTCTATTTCGAAGATAAAAATTGCCGTGTCTGGGGCGCATTGTTCAGCTGCGTCTCTCACGGTCCCTTCGCACTACAGGAAGATGAAGTCAGTGAAGTTTGCTGGCTGACGCCGGAAGAAATCACCGCACGCTGCGATGAGTTCACTCCAGACTCGCTGAAAGCGCTAGCGTTGTGGATGAAGCGCAATGCCAAAAATGAAGCCGTAGAGACTGAAACGGCAGAATGA", + "dna_sequence_length": 543, + "functions": [ + "putative NUDIX hydrolase" + ], + "id": "CDS_2284", + "location": [ + [ + "NC_000913", + 2419176, + "-", + 543 + ] + ], + "md5": "8f63c8f18ed036a81841748837a75a5d", + "parent_gene": "", + "protein_md5": "53125c9d93bd98e258222dccef54316e", + "protein_translation": "MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKNEAVETETAE", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007589" + ], + [ + "gene_synonym", + "ECK2294" + ], + [ + "gene_synonym", + "EcoGene:EG14108" + ], + [ + "gene_synonym", + "GI:49176208" + ], + [ + "gene_synonym", + "GeneID:946755" + ], + [ + "gene_synonym", + "JW5377" + ], + [ + "gene_synonym", + "NP_416803.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67095" + ], + [ + "gene_synonym", + "b2300" + ], + [ + "gene_synonym", + "yfcE" + ] + ], + "dna_sequence": "GTGATGAAACTGATGTTTGCATCGGACATTCATGGGTCGTTACCGGCGACGGAACGTGTTCTGGAGTTGTTTGCCCAAAGCGGTGCCCAGTGGCTGGTGATCCTTGGCGACGTGTTGAATCACGGCCCGCGTAATGCTTTACCGGAGGGTTACGCGCCAGCCAAAGTCGCTGAACGGCTTAATGAAGTGGCACATAAGGTTATCGCTGTGCGCGGCAACTGCGACAGCGAAGTGGATCAAATGCTGCTGCATTTCCCGATAACCGCGCCGTGGCAACAGGTATTACTGGAAAAACAACGTCTGTTTTTGACGCATGGTCATCTTTTTGGCCCGGAAAATCTGCCTGCTTTAAACCAGAACGATGTGCTGGTGTACGGTCATACCCATCTGCCAGTGGCAGAACAGCGGGGGGAGATTTTCCACTTCAACCCCGGCTCGGTGAGTATTCCGAAAGGCGGTAATCCGGCGAGTTATGGCATGCTGGATAATGACGTACTTAGTGTAATCGCACTCAATGATCAAAGTATCATTGCGCAGGTCGCGATTAATCCGTAA", + "dna_sequence_length": 555, + "functions": [ + "phosphodiesterase activity on bis-pNPP" + ], + "id": "CDS_2285", + "location": [ + [ + "NC_000913", + 2419788, + "-", + 555 + ] + ], + "md5": "d53af8beb61bb9387170b3046013f657", + "parent_gene": "", + "protein_md5": "d9895c3133fa551ccc9ea33628f5fd58", + "protein_translation": "MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVAINP", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007593" + ], + [ + "gene_synonym", + "ECK2295" + ], + [ + "gene_synonym", + "EcoGene:EG14109" + ], + [ + "gene_synonym", + "GI:16130236" + ], + [ + "gene_synonym", + "GeneID:946749" + ], + [ + "gene_synonym", + "JW2298" + ], + [ + "gene_synonym", + "NP_416804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77544" + ], + [ + "gene_synonym", + "b2301" + ], + [ + "gene_synonym", + "yfcF" + ] + ], + "dna_sequence": "ATGAGTAAACCCGCTATCACGCTTTGGTCAGATGCCCACTTTTTCTCCCCTTATGTGTTATCCGCCTGGGTGGCGTTGCAGGAAAAAGGCCTGTCGTTTCATATCAAGACCATCGACCTCGACAGCGGTGAACATTTGCAGCCGACGTGGCAAGGTTACGGTCAGACACGCCGTGTGCCGTTATTACAAATCGATGATTTTGAGTTGAGTGAATCTTCTGCCATTGCGGAGTATCTGGAAGATCGATTTGCGCCACCGACCTGGGAACGTATTTATCCGCTTGATTTAGAAAATCGTGCGCGTGCACGACAGATTCAGGCCTGGCTGCGCAGCGATCTGATGCCCATCCGCGAAGAGCGTCCGACGGATGTTGTCTTTGCGGGGGCGAAAAAAGCGCCACTAACGGCCGAGGGAAAAGCCAGTGCAGAGAAACTGTTCGCGATGGCAGAACATTTGTTAGTACTGGGTCAGCCGAATTTATTTGGTGAATGGTGCATTGCTGATACTGATCTGGCGCTAATGATTAACCGCCTGGTACTACATGGCGATGAGGTGCCAGAACGCCTGGTGGATTATGCAACATTCCAGTGGCAGCGAGCGTCTGTCCAGCGTTTTATTGCACTTTCGGCGAAGCAATCTGGCTGA", + "dna_sequence_length": 645, + "functions": [ + "glutathione S-transferase" + ], + "id": "CDS_2286", + "location": [ + [ + "NC_000913", + 2420485, + "-", + 645 + ] + ], + "md5": "32b6bbe13393238db25715a2d50d28d6", + "parent_gene": "", + "protein_md5": "b559359a9c6050f5effc7e3156227d89", + "protein_translation": "MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNLFGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG", + "protein_translation_length": 214, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007600" + ], + [ + "gene_synonym", + "ECK2296" + ], + [ + "gene_synonym", + "EcoGene:EG14110" + ], + [ + "gene_synonym", + "GI:16130237" + ], + [ + "gene_synonym", + "GeneID:946763" + ], + [ + "gene_synonym", + "JW2299" + ], + [ + "gene_synonym", + "NP_416805.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77526" + ], + [ + "gene_synonym", + "b2302" + ], + [ + "gene_synonym", + "yfcG" + ] + ], + "dna_sequence": "ATGATCGATCTCTATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGCTAAGCCTCTTTGAGTCTGGTGCCATTTTGTTGTATCTGGCTGAGAAAACAGGACTCTTTTTGAGTCATGAAACGCGTGAGCGCGCCGCCACATTACAGTGGTTATTCTGGCAGGTAGGCGGACTGGGGCCGATGCTTGGGCAAAATCATCATTTTAATCACGCAGCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAA", + "dna_sequence_length": 648, + "functions": [ + "GSH-dependent disulfide bond oxidoreductase" + ], + "id": "CDS_2287", + "location": [ + [ + "NC_000913", + 2420621, + "+", + 648 + ] + ], + "md5": "84e775333d494aab883045d21fec07ff", + "parent_gene": "", + "protein_md5": "9a5315fcb6bb866a2abd9ab28f13a3d9", + "protein_translation": "MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007603" + ], + [ + "gene_synonym", + "ECK2297" + ], + [ + "gene_synonym", + "EcoGene:EG14263" + ], + [ + "gene_synonym", + "GI:16130238" + ], + [ + "gene_synonym", + "GeneID:946781" + ], + [ + "gene_synonym", + "JW2300" + ], + [ + "gene_synonym", + "NP_416806.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC19" + ], + [ + "gene_synonym", + "b2303" + ], + [ + "gene_synonym", + "folX" + ] + ], + "dna_sequence": "ATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTACCCCGCCGATAAAGCGCGCACTAGCGAAGATATCAACGATGCGCTGAATTATCGCACCGTAACGAAAAACATTATTCAGCATGTAGAGAATAACCGTTTCTCTTTGCTGGAAAAATTAACTCAGGATGTGCTCGATATCGCACGTGAACATCACTGGGTGACGTATGCTGAAGTGGAGATCGATAAACTGCACGCGCTGCGCTACGCCGATTCGGTATCCATGACCTTAAGCTGGCAGCGTTAA", + "dna_sequence_length": 363, + "functions": [ + "D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase" + ], + "id": "CDS_2288", + "location": [ + [ + "NC_000913", + 2421325, + "+", + 363 + ] + ], + "md5": "d185751e03df6c8fa55ac12a67ab4aa5", + "parent_gene": "", + "protein_md5": "9c56481195c0a84887bc132b90327655", + "protein_translation": "MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007605" + ], + [ + "gene_synonym", + "ECK2298" + ], + [ + "gene_synonym", + "EcoGene:EG14111" + ], + [ + "gene_synonym", + "GI:16130239" + ], + [ + "gene_synonym", + "GeneID:946784" + ], + [ + "gene_synonym", + "JW2301" + ], + [ + "gene_synonym", + "NP_416807.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77775" + ], + [ + "gene_synonym", + "b2304" + ], + [ + "gene_synonym", + "yfcH" + ] + ], + "dna_sequence": "ATGAACATAGTGATCACCGGAGGGACAGGATTAATTGGTCGCCATTTGATTCCGCGTTTGCTGGAGCTGGGCCATCAAATTACGGTAGTGACGCGTAACCCGCAGAAAGCCAGTTCCGTTCTCGGCCCTCGGGTGACACTATGGCAAGGGCTTGCCGATCAAAGCAACCTCAACGGCGTTGATGCGGTAATCAACCTGGCCGGAGAACCGATTGCTGATAAACGCTGGACTCACGAGCAAAAAGAGCGTCTCTGCCAAAGCCGCTGGAATATCACGCAAAAACTGGTCGATTTGATTAATGCCAGCGACACGCCACCGTCGGTACTCATTTCCGGCTCGGCAACGGGCTATTATGGTGACTTAGGTGAAGTGGTGGTTACCGAAGAGGAACCGCCGCATAACGAATTTACCCATAAACTCTGCGCTCGCTGGGAAGAAATTGCCTGCCGGGCGCAAAGTGACAAAACGCGAGTGTGCCTGCTGCGTACCGGTGTAGTGCTGGCACCGGATGGCGGTATTCTCGGTAAAATGCTGCCGCCGTTTCGTCTTGGCCTGGGCGGGCCGATTGGCTCTGGTCGGCAGTATCTGGCCTGGATTCATATTGATGATATGGTCAACGGTATTCTCTGGCTGCTGGATAACGAGCTGCGCGGGCCATTTAATATGGTTTCGCCCTACCCGGTACGCAATGAACAATTTGCCCATGCGCTCGGTCATGCGCTGCATCGCCCGGCCATTTTGCGCGTCCCCGCGACCGCCATTCGACTGTTAATGGGCGAATCTTCAGTACTGGTATTAGGTGGACAACGCGCGCTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGA", + "dna_sequence_length": 894, + "functions": [ + "putative NAD-dependent nucleotide-sugar epimerase" + ], + "id": "CDS_2289", + "location": [ + [ + "NC_000913", + 2421708, + "+", + 894 + ] + ], + "md5": "6325bff1c4d564d8723a9529ffa5f41f", + "parent_gene": "", + "protein_md5": "12cdbbf29c934869d738de98dec2670d", + "protein_translation": "MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007607" + ], + [ + "gene_synonym", + "ECK2299" + ], + [ + "gene_synonym", + "EcoGene:EG14112" + ], + [ + "gene_synonym", + "GI:16130240" + ], + [ + "gene_synonym", + "GeneID:946787" + ], + [ + "gene_synonym", + "JW2302" + ], + [ + "gene_synonym", + "NP_416808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77768" + ], + [ + "gene_synonym", + "b2305" + ], + [ + "gene_synonym", + "yfcI" + ] + ], + "dna_sequence": "ATGACAATATCGACAACTTCCACGCCGCATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCGCGGGATTTTATTGATATTCATCTTCCCGCGCCGCTGCGCAAACTGTGTGATTTAACGACGCTTAAACTGGAACCAAACAGTTTTATTGATGAAGACCTGCGGCAATATTATTCCGACCTCTTGTGGTCTGTGAAAACGCAGGAGGGAGTGGGTTATATTTATGTAGTGATAGAGCACCAAAGTAAGCCGGAAGAATTAATGGCTTTTCGCATGATGCGTTATTCCATTGCGGCAATGCAAAACCATCTTGATGCGGGCTATAAAGAGCTTCCATTGGTGCTCCCGATGCTGTTTTATCATGGTTGCAGAAGTCCTTATCCTTATTCACTCTGCTGGCTTGATGAATTTGCCGAGCCTGCTATAGCCCGCAAAATATATTCATCGGCTTTTCCGTTGGTGGATATTACCGTGGTGCCGGATGACGAGATTATGCAACACCGCAAAATGGCGCTGTTGGAGTTAATTCAGAAACATATTCGTCAGCGCGATCTGTTGGGATTAGTCGACCAAATTGTTTCGCTGCTAGTTACAGGGAACACTAATGACAGACAGCTAAAAGCCCTGTTTAATTACGTATTACAAACAGGGGATGCCCAGCGTTTTCGTGCATTTATTGGTGAGATAGCGGAACGCGCACCACAAGAAAAGGAGAAACTGATGACCATTGCTGACAGATTACGTGAAGAAGGCGCAATGCAGGGCAAACACGAAGAAGCCCTGCGTATTGCTCAGGAGATGCTGGATAGAGGTTTAGACAGAGAGTTAGTTATGATGGTGACCCGACTTTCACCAGACGATCTTATCGCGCAAAGCCACTAA", + "dna_sequence_length": 891, + "functions": [ + "transposase_31 family protein" + ], + "id": "CDS_2290", + "location": [ + [ + "NC_000913", + 2423539, + "-", + 891 + ] + ], + "md5": "040809927d18c3a1248632c65cad7fb6", + "parent_gene": "", + "protein_md5": "76ed7ed45f8dc1f280dd497d5ce3c6b7", + "protein_translation": "MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVLPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLDRGLDRELVMMVTRLSPDDLIAQSH", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007610" + ], + [ + "gene_synonym", + "ECK2300" + ], + [ + "gene_synonym", + "EcoGene:EG10452" + ], + [ + "gene_synonym", + "GI:16130241" + ], + [ + "gene_synonym", + "GeneID:946789" + ], + [ + "gene_synonym", + "JW2303" + ], + [ + "gene_synonym", + "NP_416809.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07109" + ], + [ + "gene_synonym", + "b2306" + ], + [ + "gene_synonym", + "hisP" + ] + ], + "dna_sequence": "ATGTCCGAGAATAAATTAAACGTTATCGATTTGCACAAACGCTACGGCGAACATGAAGTGCTGAAAGGGGTATCACTGCAAGCGAATGCCGGAGATGTAATAAGCATCATCGGATCGTCGGGATCGGGGAAAAGTACCTTTCTGCGCTGCATTAACTTCCTCGAAAAACCGAGTGAAGGGTCGATCGTGGTCAATGGCCAGACGATCAATCTGGTGCGCGACAAAGACGGTCAACTCAAAGTCGCCGATAAAAATCAACTGCGCTTACTGCGCACACGCCTGACGATGGTATTCCAGCACTTCAATCTCTGGAGCCATATGACGGTGCTGGAAAACGTCATGGAAGCGCCGATTCAGGTGTTGGGCCTGAGCAAGCAGGAAGCGCGCGAGCGGGCGGTGAAGTATCTGGCAAAAGTCGGGATAGACGAACGTGCGCAGGGGAAATATCCGGTGCATCTTTCCGGCGGTCAGCAACAGCGTGTTTCTATCGCGCGGGCGCTGGCGATGGAACCGGAAGTTTTACTGTTTGATGAACCTACCTCGGCGCTCGATCCTGAACTGGTAGGCGAAGTGTTGCGTATTATGCAGCAACTGGCAGAAGAGGGGAAAACCATGGTGGTAGTGACTCACGAAATGGGCTTTGCTCGCCATGTTTCTACTCATGTCATTTTCCTCCATCAGGGGAAAATAGAAGAAGAGGGCGCGCCGGAGCAGTTATTTGGCAACCCGCAAAGCCCTCGTCTGCAACGGTTCCTTAAGGGATCGCTGAAATAA", + "dna_sequence_length": 774, + "functions": [ + "histidine ABC transporter ATPase" + ], + "id": "CDS_2291", + "location": [ + [ + "NC_000913", + 2424509, + "-", + 774 + ] + ], + "md5": "2b531a6feb7a30527427ddb5ecbecb33", + "parent_gene": "", + "protein_md5": "e17e32ecc758294b9a222b3b100f74de", + "protein_translation": "MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLFGNPQSPRLQRFLKGSLK", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007613" + ], + [ + "gene_synonym", + "ECK2301" + ], + [ + "gene_synonym", + "EcoGene:EG10007" + ], + [ + "gene_synonym", + "GI:16130242" + ], + [ + "gene_synonym", + "GeneID:946790" + ], + [ + "gene_synonym", + "JW2304" + ], + [ + "gene_synonym", + "NP_416810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEU3" + ], + [ + "gene_synonym", + "b2307" + ], + [ + "gene_synonym", + "hisM" + ] + ], + "dna_sequence": "GTGATCGAAATCTTACATGAATACTGGAAACCGCTGCTGTGGACCGACGGTTATCGCTTTACTGGTGTGGCGATCACTCTGTGGCTGCTTATTTTGTCGGTAGTGATAGGCGGAGTCCTGGCGCTGTTTCTGGCGATTGGTCGTGTCTCCAGTAATAAATACATCCAGTTTCCAATCTGGTTATTTACCTATATTTTTCGCGGTACGCCGCTGTATGTTCAGTTGCTGGTGTTCTATTCCGGCATGTACACGCTTGAGATTGTTAAGGGAACCGAATTCCTTAACGCTTTCTTCCGCAGTGGCCTGAACTGTACCGTGCTGGCGCTGACGCTTAACACCTGCGCTTACACTACCGAGATTTTTGCTGGGGCAATCCGTTCGGTTCCGCATGGGGAAATTGAAGCCGCCAGAGCCTATGGCTTCTCGACTTTTAAAATGTATCGCTGCATTATTTTGCCTTCTGCGCTGCGTATTGCGTTACCGGCATACAGCAACGAAGTGATCCTGATGCTGCACTCTACTGCGTTGGCATTTACTGCCACGGTGCCGGATCTGCTGAAAATAGCCCGCGATATTAACGCCGCCACGTATCAACCTTTTACCGCCTTCGGCATTGCCGCGGTGCTCTATTTAATCATCTCTTATGTCCTGATCAGCCTCTTTCGCAGAGCGGAAAAACGCTGGTTGCAGCATGTGAAACCTTCTTCAACGCACTGA", + "dna_sequence_length": 717, + "functions": [ + "histidine ABC transporter permease" + ], + "id": "CDS_2292", + "location": [ + [ + "NC_000913", + 2425233, + "-", + 717 + ] + ], + "md5": "2bfe76f981d9c23d4b8d316a37e339a7", + "parent_gene": "", + "protein_md5": "d6a63d3a51f4377c99c34a7d583926e5", + "protein_translation": "MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007615" + ], + [ + "gene_synonym", + "ECK2302" + ], + [ + "gene_synonym", + "EcoGene:EG12125" + ], + [ + "gene_synonym", + "GI:16130243" + ], + [ + "gene_synonym", + "GeneID:947235" + ], + [ + "gene_synonym", + "JW2305" + ], + [ + "gene_synonym", + "NP_416811.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52094" + ], + [ + "gene_synonym", + "b2308" + ], + [ + "gene_synonym", + "hisQ" + ] + ], + "dna_sequence": "ATGTTGTATGGGTTTTCAGGTGTTATTTTACAGGGTGCGCTCGTCACGCTGGAGCTGGCTATCAGCTCTGTAGTGCTCGCTGTAATCATCGGTTTAATTGGCGCTGGCGGTAAGCTCTCGCAAAATCGGCTTTCGGGGCTGATTTTCGAAGGGTACACCACGCTGATTCGTGGCGTGCCGGACTTAGTGTTGATGCTGCTGATTTTCTACGGTTTGCAGATTGCGCTAAACACGGTGACGGAGGCGATGGGCGTCGGGCAGATTGATATCGATCCGATGGTCGCTGGTATTATCACTCTCGGTTTTATCTACGGTGCTTATTTTACCGAAACGTTCCGTGGTGCTTTTATGGCAGTGCCGAAAGGACATATAGAGGCGGCGACGGCGTTCGGTTTTACTCGTGGGCAAGTGTTTCGGCGGATCATGTTTCCGTCGATGATGCGTTACGCCCTGCCAGGCATTGGCAACAACTGGCAGGTGATCCTCAAATCTACCGCACTGGTTTCGTTACTCGGCCTGGAAGATGTGGTCAAAGCCACCCAACTGGCAGGCAAAAGTACCTGGGAACCGTTCTATTTCGCCATCGTCTGTGGCGTGATTTACCTGGTTTTCACCACTGTTTCCAATGGTGTGCTGCTGTTCCTTGAGCGCCGCTACTCCGTGGGTGTGAAGAGGGCTGACCTGTGA", + "dna_sequence_length": 687, + "functions": [ + "histidine ABC transporter permease" + ], + "id": "CDS_2293", + "location": [ + [ + "NC_000913", + 2425916, + "-", + 687 + ] + ], + "md5": "5b30c1e6d2ffffef8d9159b0b575368a", + "parent_gene": "", + "protein_md5": "8e2f00c641ea643bdbd969a367b8215b", + "protein_translation": "MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007617" + ], + [ + "gene_synonym", + "ECK2303" + ], + [ + "gene_synonym", + "EcoGene:EG12124" + ], + [ + "gene_synonym", + "GI:16130244" + ], + [ + "gene_synonym", + "GeneID:945309" + ], + [ + "gene_synonym", + "JW2306" + ], + [ + "gene_synonym", + "NP_416812.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEU0" + ], + [ + "gene_synonym", + "b2309" + ], + [ + "gene_synonym", + "hisJ" + ] + ], + "dna_sequence": "ATGAAAAAACTGGTGCTATCGCTCTCTCTGGTTCTGGCCTTCTCCAGCGCAACTGCGGCGTTTGCTGCGATTCCGCAAAACATCCGCATCGGTACCGACCCGACCTATGCGCCATTTGAATCAAAAAATTCACAAGGCGAACTGGTTGGCTTCGATATCGATCTGGCAAAGGAATTATGCAAACGCATCAATACGCAATGTACGTTTGTCGAAAATCCGCTGGATGCGTTAATCCCGTCCTTAAAAGCGAAGAAGATTGACGCCATCATGTCATCGCTTTCCATTACGGAAAAACGTCAGCAAGAAATAGCCTTCACCGACAAACTGTACGCTGCCGATTCTCGTTTGGTGGTGGCGAAAAATTCTGACATTCAGCCGACAGTCGAGTCGCTGAAAGGCAAACGGGTAGGCGTATTGCAGGGCACCACCCAGGAGACGTTCGGTAATGAACATTGGGCACCAAAAGGCATTGAAATCGTCTCGTATCAGGGGCAGGACAACATTTATTCTGACCTGACTGCCGGACGTATTGATGCCGCGTTCCAGGATGAGGTCGCTGCCAGCGAAGGTTTCCTCAAACAACCTGTCGGTAAAGATTACAAATTCGGTGGCCCGTCTGTTAAAGATGAAAAACTGTTTGGCGTAGGGACCGGCATGGGCCTGCGTAAAGAAGATAACGAACTGCGCGAAGCACTGAACAAAGCCTTTGCCGAAATGCGCGCTGACGGTACTTACGAGAAATTAGCGAAAAAGTACTTCGATTTTGATGTTTATGGTGGCTAA", + "dna_sequence_length": 783, + "functions": [ + "histidine ABC transporter periplasmic binding protein" + ], + "id": "CDS_2294", + "location": [ + [ + "NC_000913", + 2426788, + "-", + 783 + ] + ], + "md5": "32ffb2402b5d3a8831ef44c0dffe3514", + "parent_gene": "", + "protein_md5": "c4cdd1b70c465cb610c9f2b2a1983a58", + "protein_translation": "MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007621" + ], + [ + "gene_synonym", + "ECK2304" + ], + [ + "gene_synonym", + "EcoGene:EG10072" + ], + [ + "gene_synonym", + "GI:16130245" + ], + [ + "gene_synonym", + "GeneID:949030" + ], + [ + "gene_synonym", + "JW2307" + ], + [ + "gene_synonym", + "NP_416813.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09551" + ], + [ + "gene_synonym", + "argT" + ], + [ + "gene_synonym", + "b2310" + ] + ], + "dna_sequence": "ATGAAGAAGTCGATTCTCGCTCTGTCTTTGTTAGTCGGTCTCTCCACAGCGGCTTCCAGCTATGCGGCGCTACCGGAGACGGTACGTATCGGAACCGATACCACCTACGCACCGTTCTCATCGAAAGATGCTAAAGGTGATTTTGTTGGCTTTGATATCGATCTCGGTAACGAGATGTGCAAACGGATGCAGGTGAAATGTACCTGGGTTGCCAGTGACTTTGACGCGCTGATCCCCTCACTGAAAGCGAAAAAAATCGACGCTATTATTTCGTCGCTTTCCATTACCGATAAACGTCAGCAGGAGATTGCCTTCTCCGACAAGCTGTACGCCGCAGATTCTCGTTTGATTGCGGCCAAAGGTTCACCGATTCAGCCAACGCTGGATTCACTGAAAGGTAAACATGTTGGTGTGCTGCAGGGATCAACCCAGGAAGCTTACGCTAACGAGACCTGGCGTAGTAAAGGCGTGGATGTGGTGGCCTATGCCAACCAGGATTTGGTCTATTCCGATCTGGCTGCAGGACGTCTGGATGCTGCGTTACAAGATGAAGTTGCTGCCAGCGAAGGATTCCTCAAGCAACCTGCTGGTAAAGATTTCGCCTTTGCTGGCTCATCAGTAAAAGACAAAAAATACTTCGGTGATGGCACCGGTGTAGGGCTACGTAAAGATGATGCTGAACTGACGGCTGCCTTCAATAAGGCGCTTGGCGAGCTGCGTCAGGACGGCACCTACGACAAGATGGCGAAAAAGTATTTCGACTTTAATGTCTACGGTGACTGA", + "dna_sequence_length": 783, + "functions": [ + "lysine/arginine/ornithine transporter subunit" + ], + "id": "CDS_2295", + "location": [ + [ + "NC_000913", + 2427791, + "-", + 783 + ] + ], + "md5": "6d7e8ad69100c0e2b581dd836c10100c", + "parent_gene": "", + "protein_md5": "65a926bfd2167943d8099013a707a4ac", + "protein_translation": "MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007628" + ], + [ + "gene_synonym", + "ECK2305" + ], + [ + "gene_synonym", + "EcoGene:EG11044" + ], + [ + "gene_synonym", + "GI:16130246" + ], + [ + "gene_synonym", + "GeneID:949033" + ], + [ + "gene_synonym", + "JW2308" + ], + [ + "gene_synonym", + "NP_416814.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG03" + ], + [ + "gene_synonym", + "b2311" + ], + [ + "gene_synonym", + "dedF" + ], + [ + "gene_synonym", + "ubiX" + ] + ], + "dna_sequence": "ATGAAACGACTCATTGTAGGCATCAGCGGTGCCAGCGGCGCGATTTATGGCGTGCGCTTATTACAGGTTCTGCGCGATGTCACAGATATCGAAACGCATCTGGTGATGAGCCAGGCAGCGCGCCAGACCTTATCCCTCGAAACGGATTTTTCTCTGCGCGAAGTGCAGGCATTAGCCGATGTCACGCACGATGCGCGCGATATTGCCGCCAGCATCTCTTCCGGTTCTTTCCAGACGCTGGGGATGGTGATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGCGGCAGATGTGGTGCTGAAAGAGCGTCGCCCGTTGGTGCTCTGCGTGCGTGAAACACCATTGCACTTAGGCCATCTGCGTTTAATGACTCAGGCGGCAGAAATCGGTGCGGTGATTATGCCTCCCGTTCCGGCGTTTTATCATCGCCCGCAATCCCTTGATGATGTGATAAATCAGACGGTTAATCGTGTTCTTGACCAGTTTGCGATAACCCTTCCTGAAGATCTCTTTGCCCGCTGGCAGGGCGCATAA", + "dna_sequence_length": 570, + "functions": [ + "3-octaprenyl-4-hydroxybenzoate carboxy-lyase" + ], + "id": "CDS_2296", + "location": [ + [ + "NC_000913", + 2428626, + "-", + 570 + ] + ], + "md5": "6342444c70c4c33f631a4558d99e500a", + "parent_gene": "", + "protein_md5": "ff72e6c4d0b3faf9e08816a9063573e7", + "protein_translation": "MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPEDLFARWQGA", + "protein_translation_length": 189, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007631" + ], + [ + "gene_synonym", + "ECK2306" + ], + [ + "gene_synonym", + "EcoGene:EG10794" + ], + [ + "gene_synonym", + "GI:16130247" + ], + [ + "gene_synonym", + "GeneID:946794" + ], + [ + "gene_synonym", + "JW2309" + ], + [ + "gene_synonym", + "NP_416815.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG16" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "b2312" + ], + [ + "gene_synonym", + "purC" + ], + [ + "gene_synonym", + "purF" + ] + ], + "dna_sequence": "ATGTGCGGTATTGTCGGTATCGCCGGTGTTATGCCGGTTAACCAGTCGATTTATGATGCCTTAACGGTGCTTCAGCATCGCGGTCAGGATGCCGCCGGCATCATCACCATAGATGCCAATAACTGCTTCCGTTTGCGTAAAGCGAACGGGCTGGTGAGCGATGTATTTGAAGCTCGCCATATGCAGCGTTTGCAGGGCAATATGGGCATTGGTCATGTGCGTTACCCCACGGCTGGCAGCTCCAGCGCCTCTGAAGCGCAGCCGTTTTACGTTAACTCCCCGTATGGCATTACGCTTGCCCACAACGGCAATCTGACCAACGCTCACGAGTTGCGTAAAAAACTGTTTGAAGAAAAACGCCGCCACATCAACACCACTTCCGACTCGGAAATTCTGCTTAATATCTTCGCCAGCGAGCTGGACAACTTCCGCCACTACCCGCTGGAAGCCGACAATATTTTCGCTGCCATTGCTGCCACAAACCGCTTAATCCGCGGCGCGTATGCCTGTGTGGCGATGATTATCGGCCACGGTATGGTTGCTTTCCGCGATCCAAACGGGATTCGTCCGCTGGTACTGGGAAAACGTGATATTGACGAGAACCGTACAGAATATATGGTCGCTTCCGAAAGCGTAGCGCTCGATACGCTGGGCTTTGATTTCCTGCGTGACGTCGCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGCAATCCGTGCCTGTTTGAGTATGTATACTTTGCCCGCCCGGACTCGTTTATCGACAAAATTTCCGTTTACAGCGCGCGTGTGAATATGGGCACGAAACTGGGCGAGAAAATTGCCCGCGAATGGGAAGATCTGGATATCGACGTGGTGATCCCGATCCCAGAAACCTCGTGTGATATCGCGCTGGAAATTGCTCGTATTCTGGGCAAACCGTACCGCCAGGGCTTCGTTAAAAACCGCTATGTTGGCCGCACCTTTATCATGCCGGGCCAGCAGCTGCGTCGTAAGTCCGTGCGCCGTAAACTGAATGCCAACCGCGCCGAGTTCCGCGATAAAAACGTCCTGCTGGTCGACGACTCCATCGTCCGTGGCACCACTTCTGAGCAGATTATCGAGATGGCACGCGAAGCCGGAGCGAAGAAAGTGTACCTCGCTTCTGCGGCACCGGAAATTCGCTTCCCGAACGTTTATGGTATTGATATGCCGAGCGCCACGGAACTGATCGCTCACGGTCGCGAAGTTGATGAAATTCGCCAGATCATCGGTGCTGACGGGTTGATTTTCCAGGATCTGAACGATCTGATCGACGCCGTTCGCGCTGAAAATCCGGATATCCAGCAGTTTGAATGCTCGGTGTTCAACGGCGTCTACGTCACCAAAGATGTTGATCAGGGCTACCTCGATTTCCTCGATACGTTACGTAATGATGACGCCAAAGCAGTGCAACGTCAGAACGAAGTGGAAAATCTCGAAATGCATAACGAAGGATGA", + "dna_sequence_length": 1518, + "functions": [ + "amidophosphoribosyltransferase" + ], + "id": "CDS_2297", + "location": [ + [ + "NC_000913", + 2430238, + "-", + 1518 + ] + ], + "md5": "0928512caae1ddfd8c72a63a3966d2de", + "parent_gene": "", + "protein_md5": "2b1b8f9dfc4399f59f801ef91703255f", + "protein_translation": "MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG", + "protein_translation_length": 505, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007633" + ], + [ + "gene_synonym", + "ECK2307" + ], + [ + "gene_synonym", + "EcoGene:EG10169" + ], + [ + "gene_synonym", + "GI:16130248" + ], + [ + "gene_synonym", + "GeneID:945055" + ], + [ + "gene_synonym", + "JW2310" + ], + [ + "gene_synonym", + "NP_416816.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08550" + ], + [ + "gene_synonym", + "b2313" + ], + [ + "gene_synonym", + "cvpA" + ], + [ + "gene_synonym", + "dedE" + ] + ], + "dna_sequence": "ATGGTCTGGATTGATTACGCCATAATCGCGGTGATTGCTTTTTCCTCTCTGGTTAGCCTGATCCGCGGCTTTGTTCGTGAAGCGTTATCGCTGGTGACATGGGGTTGTGCTTTCTTTGTTGCCAGTCATTACTACACTTACCTGTCAGTCTGGTTTACGGGCTTTGAAGACGAACTGGTTCGAAATGGGATTGCCATCGCGGTACTGTTTATCGCTACCCTGATCGTTGGTGCTATCGTGAACTTCGTGATAGGCCAGTTGGTGGAGAAAACGGGGTTGTCAGGCACCGATCGGGTGCTGGGCGTCTGTTTCGGTGCGTTGCGCGGTGTGTTGATTGTTGCTGCCATTCTCTTCTTTCTCGACTCCTTTACCGGGGTGTCGAAAAGCGAAGACTGGAGCAAATCACAGCTGATCCCGCAATTCAGTTTTATCATCAGATGTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAA", + "dna_sequence_length": 489, + "functions": [ + "colicin V production protein" + ], + "id": "CDS_2298", + "location": [ + [ + "NC_000913", + 2430763, + "-", + 489 + ] + ], + "md5": "eb9518b02a4cb644ef75531a495416a5", + "parent_gene": "", + "protein_md5": "c7dabbedbcc8b42cc9d24263ae5fa4b9", + "protein_translation": "MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007643" + ], + [ + "gene_synonym", + "ECK2308" + ], + [ + "gene_synonym", + "EcoGene:EG10218" + ], + [ + "gene_synonym", + "GI:90111417" + ], + [ + "gene_synonym", + "GeneID:944971" + ], + [ + "gene_synonym", + "JW5378" + ], + [ + "gene_synonym", + "NP_416817.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09549" + ], + [ + "gene_synonym", + "b2314" + ], + [ + "gene_synonym", + "dedD" + ] + ], + "dna_sequence": "GTGGCAAGTAAGTTTCAGAATCGGTTAGTGGGCACGATCGTGCTGGTGGCGCTGGGGGTGATTGTACTTCCAGGGCTGCTGGACGGGCAGAAAAAACATTATCAGGATGAGTTCGCGGCTATCCCGCTGGTGCCGAAAGCGGGCGATCGTGATGAGCCTGATATGATGCCAGCCGCCACCCAGGCGTTACCGACGCAGCCGCCGGAAGGCGCAGCGGAAGAGGTGCGGGCAGGTGATGCCGCAGCACCGTCGCTCGATCCGGCCACTATTGCAGCCAATAACACCGAGTTTGAACCGGAACCTGCACCGGTCGCCCCACCGAAGCCGAAACCGGTGGAGCCGCCTAAACCAAAGGTTGAAGCACCACCTGCGCCGAAGCCAGAACCGAAGCCGGTCGTGGAAGAAAAAGCTGCACCGACGGGTAAAGCCTATGTTGTGCAACTGGGTGCGCTGAAAAATGCCGATAAAGTGAATGAGATTGTCGGTAAGCTGCGCGGTGCCGGTTATCGGGTTTATACGTCGCCATCCACGCCAGTGCAGGGTAAAATTACCCGTATTCTGGTTGGGCCGGATGCCTCGAAAGATAAGCTGAAAGGTTCGCTGGGTGAGTTGAAGCAACTTTCTGGCTTAAGTGGCGTGGTAATGGGCTATACGCCGAATTAA", + "dna_sequence_length": 663, + "functions": [ + "membrane-anchored periplasmic protein involved in septation" + ], + "id": "CDS_2299", + "location": [ + [ + "NC_000913", + 2431684, + "-", + 663 + ] + ], + "md5": "43e500cb4a20fb5c9ce6bb3994b01bab", + "parent_gene": "", + "protein_md5": "c11d6e96323c300744d87e36cbb2e49c", + "protein_translation": "MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007645" + ], + [ + "gene_synonym", + "ECK2309" + ], + [ + "gene_synonym", + "EcoGene:EG10327" + ], + [ + "gene_synonym", + "GI:16130250" + ], + [ + "gene_synonym", + "GeneID:945451" + ], + [ + "gene_synonym", + "JW2312" + ], + [ + "gene_synonym", + "NP_416818.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08192" + ], + [ + "gene_synonym", + "b2315" + ], + [ + "gene_synonym", + "dedC" + ], + [ + "gene_synonym", + "folC" + ] + ], + "dna_sequence": "ATGATTATCAAACGCACTCCTCAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCTGGAAAACCTGCACAGTAAAACTATCGATCTCGGCCTTGAGCGCGTGAGCCTGGTCGCGGCGCGTCTTGGCGTCCTGAAACCAGCGCCATTTGTGTTTACCGTTGCGGGTACGAATGGCAAAGGCACCACCTGCCGTACGCTGGAGTCGATTCTGATGGCGGCAGGGTACAAAGTGGGCGTCTACAGTTCGCCTCATCTGGTGCGTTATACCGAGCGCGTACGTGTGCAGGGCCAGGAATTGCCGGAATCGGCCCACACCGCCTCTTTTGCGGAGATTGAATCGGCACGCGGTGATATTTCCCTGACCTATTTCGAGTACGGTACGCTGTCGGCGTTGTGGCTGTTCAAGCAGGCACAACTTGACGTGGTGATTCTGGAAGTAGGGCTGGGCGGTCGTCTGGACGCAACCAATATTGTCGACGCCGATGTCGCGGTAGTAACCAGTATTGCGCTGGATCATACCGACTGGCTGGGTCCAGATCGCGAAAGTATTGGTCGCGAGAAAGCAGGCATCTTCCGCAGCGAAAAACCGGCAATTGTCGGTGAGCCGGAAATGCCTTCTACCATTGCTGATGTGGCGCAGGAAAAAGGTGCACTGTTACAACGTCGGGGCGTTGAGTGGAACTATTCCGTCACCGATCATGACTGGGCGTTTAGCGATGCTCACGGCACGCTGGAAAATCTGCCGTTGCCGCTTGTCCCGCAACCGAATGCCGCAACAGCGCTGGCGGCACTGCGTGCCAGCGGGCTGGAAGTCAGTGAAAATGCCATTCGCGACGGGATTGCCAGCGCAATTTTGCCGGGACGTTTCCAGATTGTGAGCGAGTCGCCACGCGTTATTTTTGATGTCGCGCATAATCCACATGCGGCGGAATATCTCACCGGGCGTATGAAAGCGCTACCGAAAAACGGGCGCGTGCTGGCGGTTATCGGTATGCTACATGATAAAGATATTGCCGGAACTCTGGCCTGGTTGAAAAGCGTGGTTGATGACTGGTATTGTGCGCCACTGGAAGGGCCGCGCGGTGCCACGGCAGAACAACTGCTTGAGCATTTGGGTAACGGCAAATCATTTGATAGCGTTGCGCAGGCATGGGATGCCGCAATGGCGGACGCTAAAGCGGAAGACACCGTGCTGGTGTGTGGTTCTTTCCACACGGTCGCACATGTCATGGAAGTGATTGACGCGAGGAGAAGCGGTGGCAAGTAA", + "dna_sequence_length": 1269, + "functions": [ + "bifunctional folylpolyglutamate synthase/ dihydrofolate synthase" + ], + "id": "CDS_2300", + "location": [ + [ + "NC_000913", + 2432942, + "-", + 1269 + ] + ], + "md5": "e1ccfc8b0e77beda5b1e8db713b10cf1", + "parent_gene": "", + "protein_md5": "280c609c885bd4731710722942144c15", + "protein_translation": "MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSLVAARLGVLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGALLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENAIRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSFHTVAHVMEVIDARRSGGK", + "protein_translation_length": 422, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007648" + ], + [ + "gene_synonym", + "ECK2310" + ], + [ + "gene_synonym", + "EcoGene:EG10217" + ], + [ + "gene_synonym", + "GI:16130251" + ], + [ + "gene_synonym", + "GeneID:946796" + ], + [ + "gene_synonym", + "JW2313" + ], + [ + "gene_synonym", + "NP_416819.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Q5" + ], + [ + "gene_synonym", + "accD" + ], + [ + "gene_synonym", + "b2316" + ], + [ + "gene_synonym", + "dedB" + ], + [ + "gene_synonym", + "usg" + ] + ], + "dna_sequence": "ATGAGCTGGATTGAACGAATTAAAAGCAACATTACTCCCACCCGCAAGGCGAGCATTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGTCAGGTTTTATACCGCGCTGAGCTGGAACGTAATCTTGAGGTCTGTCCGAAGTGTGACCATCACATGCGTATGACAGCGCGTAATCGCCTGCATAGCCTGTTAGATGAAGGAAGCCTTGTGGAGCTGGGTAGCGAGCTTGAGCCGAAAGATGTGCTGAAGTTTCGTGACTCCAAGAAGTATAAAGACCGTCTGGCATCTGCGCAGAAAGAAACCGGCGAAAAAGATGCGCTGGTGGTGATGAAAGGCACTCTGTATGGAATGCCGGTTGTCGCTGCGGCATTCGAGTTCGCCTTTATGGGCGGTTCAATGGGGTCTGTTGTGGGTGCACGTTTCGTGCGTGCCGTTGAGCAGGCGCTGGAAGATAACTGCCCGCTGATCTGCTTCTCCGCCTCTGGTGGCGCACGTATGCAGGAAGCACTGATGTCGCTGATGCAGATGGCGAAAACCTCTGCGGCACTGGCAAAAATGCAGGAGCGCGGCTTGCCGTACATCTCCGTGCTGACCGACCCGACGATGGGCGGTGTTTCTGCAAGTTTCGCCATGCTGGGCGATCTCAACATCGCTGAACCGAAAGCGTTAATCGGCTTTGCCGGTCCGCGTGTTATCGAACAGACCGTTCGCGAAAAACTGCCGCCTGGATTCCAGCGCAGTGAATTCCTGATCGAGAAAGGCGCGATCGACATGATCGTCCGTCGTCCGGAAATGCGCCTGAAACTGGCGAGCATTCTGGCGAAGTTGATGAATCTGCCAGCGCCGAATCCTGAAGCGCCGCGTGAAGGCGTAGTGGTACCCCCGGTACCGGATCAGGAACCTGAGGCCTGA", + "dna_sequence_length": 915, + "functions": [ + "acetyl-CoA carboxylase, beta (carboxyltransferase) subunit" + ], + "id": "CDS_2301", + "location": [ + [ + "NC_000913", + 2433926, + "-", + 915 + ] + ], + "md5": "d6e9d73b694d8724d9bf6d45168b49da", + "parent_gene": "", + "protein_md5": "00f16035247d9646639b739f14fd7dc5", + "protein_translation": "MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQEPEA", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007653" + ], + [ + "gene_synonym", + "ECK2311" + ], + [ + "gene_synonym", + "EcoGene:EG10216" + ], + [ + "gene_synonym", + "GI:16130252" + ], + [ + "gene_synonym", + "GeneID:946798" + ], + [ + "gene_synonym", + "JW2314" + ], + [ + "gene_synonym", + "NP_416820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABP6" + ], + [ + "gene_synonym", + "b2317" + ], + [ + "gene_synonym", + "dedA" + ] + ], + "dna_sequence": "ATGGACCTGATTTATTTCCTCATCGATTTTATCCTGCACATTGACGTGCATCTGGCAGAGCTGGTCGCGGAGTACGGCGTCTGGGTTTATGCCATTTTGTTCTTAATTTTGTTCTGTGAAACCGGTCTGGTGGTAACGCCGTTTTTACCGGGTGATTCATTGCTGTTTGTTGCCGGAGCGTTGGCATCACTGGAAACCAACGATCTCAACGTCCATATGATGGTGGTGCTGATGCTGATCGCCGCGATTGTGGGTGACGCGGTCAATTACACTATCGGGCGGTTGTTCGGTGAAAAGTTGTTCAGTAATCCCAATTCGAAAATTTTCCGTCGCAGTTATCTCGACAAAACCCATCAGTTTTATGAGAAACATGGCGGCAAAACGATTATTCTCGCCCGTTTTGTGCCGATCGTCAGAACGTTCGCCCCGTTTGTTGCGGGAATGGGCCACATGTCGTACCGTCATTTCGCCGCTTATAACGTGATCGGCGCACTGTTGTGGGTACTGCTTTTTACCTACGCAGGCTATTTCTTCGGTACAATCCCGATGGTTCAGGATAACCTTAAGCTGCTGATCGTCGGGATTATTGTGGTTTCTATTTTGCCGGGCGTCATCGAAATAATCCGTCACAAACGCGCTGCGGCACGCGCCGCAAAATAA", + "dna_sequence_length": 660, + "functions": [ + "DedA family inner membrane protein" + ], + "id": "CDS_2302", + "location": [ + [ + "NC_000913", + 2434741, + "-", + 660 + ] + ], + "md5": "1e16950bca3325180efa2aa75f9fe091", + "parent_gene": "", + "protein_md5": "21b21923ff6f1fa0d08ee0d7d60d1f78", + "protein_translation": "MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAAK", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007657" + ], + [ + "gene_synonym", + "ECK2312" + ], + [ + "gene_synonym", + "EcoGene:EG10454" + ], + [ + "gene_synonym", + "GI:16130253" + ], + [ + "gene_synonym", + "GeneID:946793" + ], + [ + "gene_synonym", + "JW2315" + ], + [ + "gene_synonym", + "NP_416821.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07649" + ], + [ + "gene_synonym", + "asuC" + ], + [ + "gene_synonym", + "b2318" + ], + [ + "gene_synonym", + "hisT" + ], + [ + "gene_synonym", + "leuK" + ], + [ + "gene_synonym", + "truA" + ] + ], + "dna_sequence": "ATGTCCGACCAGCAACAACCGCCAGTTTATAAAATTGCGCTGGGCATTGAGTACGACGGCAGTAAGTATTACGGCTGGCAACGGCAGAACGAAGTCCGCAGTGTGCAGGAGAAGCTGGAAAAGGCGCTCTCCCAGGTGGCGAACGAACCCATCACCGTCTTCTGCGCCGGGCGTACTGACGCAGGGGTACACGGTACCGGGCAGGTTGTGCATTTCGAAACAACCGCGCTGCGCAAAGACGCGGCGTGGACCTTGGGCGTAAATGCGAATTTACCTGGTGACATCGCTGTGCGTTGGGTTAAAACTGTACCTGATGATTTTCATGCCCGATTTAGCGCCACGGCTCGCCGTTATCGCTACATCATCTACAATCATCGGCTGCGCCCGGCGGTACTGAGTAAAGGGGTAACCCATTTTTACGAACCGCTGGACGCTGAACGGATGCATCGGGCTGCGCAATGCTTGCTGGGCGAGAATGATTTCACCTCGTTCCGTGCGGTGCAGTGCCAGTCCCGAACCCCGTGGCGCAACGTTATGCATATTAATGTCACGCGTCACGGTCCTTATGTGGTGGTAGATATTAAAGCGAATGCTTTTGTACATCATATGGTCAGGAATATTGTCGGCAGCCTGATGGAAGTCGGTGCCCACAACCAGCCGGAGAGCTGGATAGCAGAGTTGCTGGCGGCAAAGGACAGAACGCTGGCGGCAGCAACGGCAAAAGCGGAAGGGCTGTATCTGGTCGCGGTGGATTACCCTGACCGGTATGATCTTCCAAAACCGCCAATGGGCCCGCTATTTCTGGCGGACTAA", + "dna_sequence_length": 813, + "functions": [ + "tRNA pseudouridine(38-40) synthase" + ], + "id": "CDS_2303", + "location": [ + [ + "NC_000913", + 2435636, + "-", + 813 + ] + ], + "md5": "9f122ab3a55706fa69c8cf672ab062e1", + "parent_gene": "", + "protein_md5": "eff7bcacb9fe4119018b295d02e209c9", + "protein_translation": "MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007660" + ], + [ + "gene_synonym", + "ECK2313" + ], + [ + "gene_synonym", + "EcoGene:EG11059" + ], + [ + "gene_synonym", + "GI:16130254" + ], + [ + "gene_synonym", + "GeneID:946797" + ], + [ + "gene_synonym", + "JW2316" + ], + [ + "gene_synonym", + "NP_416822.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08390" + ], + [ + "gene_synonym", + "b2319" + ], + [ + "gene_synonym", + "usg" + ] + ], + "dna_sequence": "ATGTCTGAAGGCTGGAACATTGCCGTCCTGGGCGCAACTGGCGCTGTGGGCGAAGCCCTGCTTGAAACGCTGGCTGAACGTCAGTTCCCGGTTGGGGAAATTTATGCACTGGCACGTAACGAAAGCGCAGGCGAACAACTGCGCTTTGGTGGTAAGACAATCACCGTGCAGGATGCCGCTGAATTCGACTGGACGCAGGCGCAGCTGGCATTTTTTGTCGCAGGCAAAGAAGCTACCGCTGCCTGGGTTGAAGAAGCGACCAACTCAGGTTGCCTGGTGATCGACAGCAGTGGATTGTTTGCTCTCGAACCCGACGTACCGCTGGTGGTGCCGGAAGTAAACCCGTTTGTACTGACAGATTACCGGAACCGGAATGTCATCGCCGTACCAGACAGTCTGACCAGCCAGCTGCTGGCGGCACTGAAACCGTTAATCGATCAGGGCGGTTTATCACGTATCAGCGTTACCAGCCTGATTTCAGCCTCCGCCCAGGGCAAAAAAGCGGTCGATGCGTTAGCGGGGCAGAGTGCGAAATTGCTCAACGGCATTCCGATTGACGAAGAAGATTTCTTCGGGCGTCAGCTGGCGTTCAACATGCTGCCGTTACTGCCGGATAGCGAAGGTAGCGTGCGTGAAGAACGTCGTATCGTTGACGAAGTACGCAAAATCCTGCAGGACGAAGGGCTGATGATTTCGGCTAGCGTCGTCCAGGCACCGGTATTCTACGGTCATGCCCAGATGGTCAACTTTGAAGCTCTGCGTCCACTGGCAGCAGAAGAAGCGCGTGATGCGTTTGTTCAAGGCGAAGATATTGTGCTCTCTGAAGAGAACGAATTCCCAACTCAGGTAGGTGATGCTTCGGGTACGCCGCATCTTTCTGTTGGCTGCGTGCGTAATGACTACGGTATGCCGGAGCAAGTCCAGTTCTGGTCGGTGGCCGATAACGTTCGCTTTGGCGGCGCGCTGATGGCAGTAAAAATCGCCGAGAAACTGGTGCAGGAGTATCTGTACTAA", + "dna_sequence_length": 1014, + "functions": [ + "putative semialdehyde dehydrogenase" + ], + "id": "CDS_2304", + "location": [ + [ + "NC_000913", + 2436649, + "-", + 1014 + ] + ], + "md5": "1e2de5dce6ba1f08f8d4b5d68cf48637", + "parent_gene": "", + "protein_md5": "d7906d1a5ded288755dd1dd0f82ce01a", + "protein_translation": "MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFVQGEDIVLSEENEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007663" + ], + [ + "gene_synonym", + "ECK2314" + ], + [ + "gene_synonym", + "EcoGene:EG10692" + ], + [ + "gene_synonym", + "GI:16130255" + ], + [ + "gene_synonym", + "GeneID:946785" + ], + [ + "gene_synonym", + "JW2317" + ], + [ + "gene_synonym", + "NP_416823.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05459" + ], + [ + "gene_synonym", + "b2320" + ], + [ + "gene_synonym", + "pdxB" + ] + ], + "dna_sequence": "GTGAAAATCCTTGTTGATGAAAATATGCCTTATGCCCGCGACTTATTTAGCCGTTTGGGTGAGGTGACCGCGGTTCCCGGGCGTCCAATCCCCGTCGCTCAACTGGCAGACGCGGATGCGCTGATGGTGCGTTCGGTCACGAAAGTGAATGAATCTTTGCTGGCAGGAAAACCCATTAAATTTGTTGGCACTGCCACTGCGGGGACCGACCATGTCGATGAAGCATGGTTGAAGCAGGCGGGAATTGGTTTTTCCGCTGCACCTGGCTGTAATGCGATTGCGGTGGTGGAATATGTTTTCTCCTCCCTGCTGATGCTTGCCGAACGCGATGGATTTTCACTGTACGACCGTACGGTGGGGATCGTGGGCGTTGGTAACGTTGGACGTCGATTGCAGGCGCGACTGGAAGCGTTAGGGATTAAAACCTTACTTTGCGATCCGCCTCGCGCCGACCGTGGGGATGAGGGTGATTTCCGCTCGCTGGATGAGTTAGTCCAGCGCGCGGATATTCTGACTTTCCATACGCCACTCTTTAAAGATGGTCCGTACAAAACGCTACATCTGGCGGATGAAAAACTGATCCGTAGCCTGAAGCCCGGAGCGATTCTGATTAACGCCTGCCGTGGCGCAGTCGTCGATAATACTGCGTTGCTGACCTGCCTGAATGAAGGCCAGAAGTTAAGCGTAGTGCTGGATGTCTGGGAAGGCGAACCGGAACTCAACGTCGAGCTGCTGAAAAAAGTGGATATCGGCACGTCGCATATCGCAGGCTATACCCTGGAAGGTAAAGCACGCGGTACTACGCAAGTGTTTGAAGCTTATAGCAAGTTTATTGGGCATGAACAGCACGTTGCGCTGGATACATTACTGCCTGCGCCAGAGTTTGGTCGCATTACGCTGCATGGCCCGCTCGATCAACCGACGCTGAAAAGGCTGGTGCATTTGGTGTATGATGTGCGCCGCGATGACGCACCGCTGCGTAAAGTCGCCGGGATACCGGGTGAGTTCGATAAACTGCGCAAAAACTATCTTGAGCGCCGTGAATGGTCATCTCTGTATGTAATTTGTGATGACGCCAGTGCGGCATCATTGCTGTGTAAACTGGGTTTTAACGCCGTTCATCATCCGGCACGTTAA", + "dna_sequence_length": 1137, + "functions": [ + "erythronate-4-phosphate dehydrogenase" + ], + "id": "CDS_2305", + "location": [ + [ + "NC_000913", + 2437851, + "-", + 1137 + ] + ], + "md5": "2123b1622fb8018b13096adc20017b74", + "parent_gene": "", + "protein_md5": "30ff119c62bd025c986f1e7889578200", + "protein_translation": "MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLYDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTSHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007667" + ], + [ + "gene_synonym", + "ECK2315" + ], + [ + "gene_synonym", + "EcoGene:EG10229" + ], + [ + "gene_synonym", + "GI:16130256" + ], + [ + "gene_synonym", + "GeneID:946776" + ], + [ + "gene_synonym", + "JW2318" + ], + [ + "gene_synonym", + "NP_416824.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15286" + ], + [ + "gene_synonym", + "b2321" + ], + [ + "gene_synonym", + "div" + ], + [ + "gene_synonym", + "flk" + ], + [ + "gene_synonym", + "rflH" + ] + ], + "dna_sequence": "ATGATACAACCTATTTCCGGCCCTCCTCCTGGGCAACCACCAGGTCAGGGAGATAATCTGCCGTCTGGCACGGGCAATCAGCCTTTATCCAGTCAGCAACGTACTTCGCTGGAAAGCTTAATGACGAAAGTGACCTCACTGACGCAACAGCAAAGAGCAGAACTGTGGGCGGGTATCAGGCACGATATTGGTCTGTCGGGAGATTCACCGCTGCTTTCGCGTCACTTCCCTGCCGCTGAGCATAATCTGGCGCAACGTCTGCTGGCCGCGCAAAAAAGCCATTCTGCCCGCCAGCTTTTAGCGCAATTAGGGGAGTATTTACGTCTGGGGAATAATCGTCAGGCGGTCACGGATTATATCCGTCATAACTTTGGTCAGACGCCGCTGAATCAGCTCTCACCGGAGCAATTAAAAACCATTCTCACCCTGTTGCAGGAAGGGAAGATGGTTATTCCGCAACCACAGCAGCGCGAGGCGACCGACCGTCCTTTATTACCGGCGGAGCACAATGCGCTAAAACAGCTGGTGACCAAACTTGCGGCGGCAACGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATGGCGAGTTAATTCCAGCGAAACTGTTTAACCATCTGGTGACCTGGCTACAGGCGCGTCAGACGCTAAGCCAGCAAAATACGCCGACGCTGGAATCACTACAGATGACGCTAAAACAACCTTTAGATGCCAGTGAACTGGCGGCGTTATCGGCATATATCCAGCAAAAATATGGTCTTTCTGCGCAATCATCGCTTTCTTCTGCCCAGGCCGAGGATATTCTTAATCAGCTTTATCAACGGCGGGTTAAAGGGATTGATCCGCGTGTTATGCAACCGCTGCTTAATCCTTTTCCACCGATGATGGACACGTTGCAAAATATGGCAACGCGTCCCGCGCTGTGGATACTGTTAGTCGCGATTATCCTGATGCTGGTCTGGCTGGTTCGTTAA", + "dna_sequence_length": 996, + "functions": [ + "putative flagella assembly protein" + ], + "id": "CDS_2306", + "location": [ + [ + "NC_000913", + 2437950, + "+", + 996 + ] + ], + "md5": "1bd4a7472c430d44590932ea6e47e009", + "parent_gene": "", + "protein_md5": "8c427423cdce9398529d1ea8d7c2f4d3", + "protein_translation": "MIQPISGPPPGQPPGQGDNLPSGTGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007669" + ], + [ + "gene_synonym", + "ECK2316" + ], + [ + "gene_synonym", + "EcoGene:EG14113" + ], + [ + "gene_synonym", + "GI:16130257" + ], + [ + "gene_synonym", + "GeneID:946791" + ], + [ + "gene_synonym", + "JW2319" + ], + [ + "gene_synonym", + "NP_416825.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77549" + ], + [ + "gene_synonym", + "b2322" + ], + [ + "gene_synonym", + "yfcJ" + ] + ], + "dna_sequence": "ATGACTGCTGTAAGCCAAACCGAAACACGATCTTCTGCCAATTTTTCGCTCTTCCGCATCGCTTTTGCGGTTTTTCTCACCTACATGACCGTAGGGTTGCCGTTGCCGGTTATCCCGCTGTTTGTTCATCATGAACTGGGCTATGGCAATACCATGGTCGGCATTGCCGTCGGGATTCAGTTTCTGGCTACGGTGCTGACGCGTGGTTACGCCGGGCGACTGGCCGATCAATATGGTGCAAAACGTTCGGCGCTTCAGGGAATGTTAGCTTGTGGTCTGGCTGGCGGCGCGTTGCTGCTGGCGGCGATTTTGCCTGTCTCCGCACCGTTCAAATTTGCTCTGTTGGTCGTCGGGCGTTTGATTCTTGGCTTTGGTGAAAGCCAGTTACTGACAGGCGCTCTGACCTGGGGACTAGGCATCGTAGGGCCAAAACACTCTGGCAAAGTGATGTCATGGAACGGAATGGCGATTTACGGTGCCCTCGCTGTTGGTGCTCCGCTTGGCCTGTTGATTCATAGCCATTACGGTTTTGCCGCACTGGCGATCACCACAATGGTATTACCCGTACTGGCGTGGGCCTGTAACGGCACAGTGCGCAAAGTACCGGCCCTGGCGGGAGAACGTCCATCGCTGTGGAGCGTTGTCGGGCTTATCTGGAAACCAGGGTTAGGTCTGGCACTACAAGGCGTTGGTTTTGCTGTTATCGGGACTTTCGTTTCGCTCTACTTTGCCAGCAAAGGATGGGCGATGGCGGGCTTTACTCTTACCGCGTTTGGCGGCGCATTTGTCGTGATGCGCGTCATGTTTGGCTGGATGCCGGACCGTTTTGGCGGCGTGAAAGTGGCGATTGTCTCTCTGCTTGTAGAAACGGTGGGCTTGTTGCTGCTCTGGCAAGCCCCAGGTGCATGGGTCGCATTAGCGGGCGCGGCGTTAACCGGAGCCGGATGTTCGCTTATCTTTCCTGCGCTGGGCGTGGAGGTGGTTAAACGCGTCCCCTCACAAGTTCGCGGCACCGCACTGGGCGGTTACGCCGCGTTTCAGGATATCGCCCTCGGCGTCTCCGGGCCGCTGGCGGGAATGCTGGCGACCACGTTTGGTTACTCTTCGGTATTTCTTGCCGGGGCGATCTCTGCGGTGCTGGGTATTATTGTCACGATACTGTCATTTCGTCGGGGTTAA", + "dna_sequence_length": 1179, + "functions": [ + "putative arabinose efflux transporter" + ], + "id": "CDS_2307", + "location": [ + [ + "NC_000913", + 2440120, + "-", + 1179 + ] + ], + "md5": "e22713f09de2f8f1e46ef39998735efa", + "parent_gene": "", + "protein_md5": "2bfeadb0af89cb7fa6920e2fed7ce1eb", + "protein_translation": "MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAALAITTMVLPVLAWACNGTVRKVPALAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007675" + ], + [ + "gene_synonym", + "ECK2317" + ], + [ + "gene_synonym", + "EcoGene:EG10274" + ], + [ + "gene_synonym", + "GI:16130258" + ], + [ + "gene_synonym", + "GeneID:946799" + ], + [ + "gene_synonym", + "JW2320" + ], + [ + "gene_synonym", + "NP_416826.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A953" + ], + [ + "gene_synonym", + "b2323" + ], + [ + "gene_synonym", + "fabB" + ], + [ + "gene_synonym", + "fabC" + ] + ], + "dna_sequence": "ATGAAACGTGCAGTGATTACTGGCCTGGGCATTGTTTCCAGCATCGGTAATAACCAGCAGGAAGTCCTGGCATCTCTGCGTGAAGGACGTTCAGGGATCACTTTCTCTCAGGAGCTGAAGGATTCCGGCATGCGTAGCCACGTCTGGGGCAACGTAAAACTGGATACCACTGGCCTCATTGACCGCAAAGTTGTGCGCTTTATGAGCGACGCATCCATTTATGCATTCCTTTCTATGGAGCAGGCAATCGCTGATGCGGGCCTCTCTCCGGAAGCTTACCAGAATAACCCGCGCGTTGGCCTGATTGCAGGTTCCGGCGGCGGCTCCCCGCGTTTCCAGGTGTTCGGCGCTGACGCAATGCGCGGCCCGCGCGGCCTGAAAGCGGTTGGCCCGTATGTGGTCACCAAAGCGATGGCATCCGGCGTTTCTGCCTGCCTCGCCACCCCGTTTAAAATTCATGGCGTTAACTACTCCATCAGCTCCGCGTGTGCGACTTCCGCACACTGTATCGGTAACGCAGTAGAGCAGATCCAACTGGGCAAACAGGACATCGTGTTTGCTGGCGGCGGCGAAGAGCTGTGCTGGGAAATGGCTTGCGAATTCGACGCAATGGGTGCGCTGTCTACTAAATACAACGACACCCCGGAAAAAGCCTCCCGTACTTACGACGCTCACCGTGACGGTTTCGTTATCGCTGGCGGCGGCGGTATGGTAGTGGTTGAAGAGCTGGAACACGCGCTGGCGCGTGGTGCTCACATCTATGCTGAAATCGTTGGCTACGGCGCAACCTCTGATGGTGCAGACATGGTTGCTCCGTCTGGCGAAGGCGCAGTACGCTGCATGAAGATGGCGATGCATGGCGTTGATACCCCAATCGATTACCTGAACTCCCACGGTACTTCGACTCCGGTTGGCGACGTGAAAGAGCTGGCAGCTATCCGTGAAGTGTTCGGCGATAAGAGCCCGGCGATTTCTGCAACCAAAGCCATGACCGGTCACTCTCTGGGCGCTGCTGGCGTACAGGAAGCTATCTACTCTCTGCTGATGCTGGAACACGGCTTTATCGCCCCGAGCATCAACATTGAAGAGCTGGACGAGCAGGCTGCGGGTCTGAACATCGTGACCGAAACGACCGATCGCGAACTGACCACCGTTATGTCTAACAGCTTCGGCTTCGGCGGCACCAACGCCACGCTGGTAATGCGCAAGCTGAAAGATTAA", + "dna_sequence_length": 1221, + "functions": [ + "3-oxoacyl-[acyl-carrier-protein] synthase I" + ], + "id": "CDS_2308", + "location": [ + [ + "NC_000913", + 2441605, + "-", + 1221 + ] + ], + "md5": "95182d1a13ab8274eab760c2052a9c74", + "parent_gene": "", + "protein_md5": "d6474761a2d8f2787d17c08775c8d77c", + "protein_translation": "MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007681" + ], + [ + "gene_synonym", + "ECK2318" + ], + [ + "gene_synonym", + "EcoGene:EG14114" + ], + [ + "gene_synonym", + "GI:90111418" + ], + [ + "gene_synonym", + "GeneID:946800" + ], + [ + "gene_synonym", + "JW5380" + ], + [ + "gene_synonym", + "NP_416827.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77182" + ], + [ + "gene_synonym", + "b2324" + ], + [ + "gene_synonym", + "mnmC" + ], + [ + "gene_synonym", + "trmC" + ], + [ + "gene_synonym", + "yfcK" + ] + ], + "dna_sequence": "GTGAAACACTACTCCATACAACCTGCCAACCTCGAATTTAATGCTGAGGGTACACCTGTTTCCCGAGATTTTGACGATGTCTATTTTTCCAACGATAACGGGCTGGAAGAGACGCGTTATGTTTTTCTGGGAGGCAACCAATTAGAGGTACGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGATTAAACTTCCTGACGCTATGGCAGGCATTTGATCAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGAAATTTCCCCTCACCCGTGCGGATTTAGCCTTAGCGCATCAACACTGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACGCTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTGCGCCAGCGAAAAACCCGGATATGTGGACGCAAAATCTGTTTAACGCCATGGCAAGGTTGGCGCGTCCGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGAGGCAAATGCGGTTGAACAAATTACGGGCGTTGCGACAAATTGCAGCGGCATTACTTATCCGCAAGGTGGTTGGCTGTGCCCAGCAGAACTGACCCGTAATGTGCTGGAACTGGCGCAACAGCAGGGTTTGCAGATTTATTATCAATATCAGTTACAGAATTTATCCCGTAAGGATGACTGTTGGTTGTTGAATTTTGCAGGAGATCAGCAAGCAACACACAGCGTAGTGGTACTGGCGAACGGGCATCAAATCAGCCGATTCAGCCAAACGTCGACTCTCCCGGTGTATTCGGTTGCCGGGCAGGTCAGCCATATTCCGACAACGCCGGAATTGGCAGAGCTGAAGCAGGTGCTGTGCTATGACGGTTATCTCACGCCACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGATACGGCGTACAGTGAGGACGATCAGCAGCAGAATCGCCAGCGGTTGATTGATTGTTTCCCGCAGGCACAGTGGGCAAAAGAGGTTGATGTCAGTGATAAAGAGGCGCGCTGCGGTGTGCGTTGTGCCACCCGCGATCATCTGCCAATGGTAGGCAATGTTCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCGATGGATGCCAGTACGCTGGCGGCGTTAAACCCGAATCGGTTATGGGTGCGGAAATTGTTGAAGGGTAAAGCGGTTAAGGCGGGGTAA", + "dna_sequence_length": 2007, + "functions": [ + "fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme" + ], + "id": "CDS_2309", + "location": [ + [ + "NC_000913", + 2441764, + "+", + 2007 + ] + ], + "md5": "0ce7f00996ed3d69cd42c8d182d6a6a1", + "parent_gene": "", + "protein_md5": "b9c10f4080285bdbe4737b462377c825", + "protein_translation": "MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG", + "protein_translation_length": 668, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007684" + ], + [ + "gene_synonym", + "ECK2319" + ], + [ + "gene_synonym", + "EcoGene:EG14115" + ], + [ + "gene_synonym", + "GI:16130260" + ], + [ + "gene_synonym", + "GeneID:946804" + ], + [ + "gene_synonym", + "JW2322" + ], + [ + "gene_synonym", + "NP_416828.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64540" + ], + [ + "gene_synonym", + "b2325" + ], + [ + "gene_synonym", + "yfcL" + ] + ], + "dna_sequence": "ATGATCGCGGAGTTTGAATCACGCATTCTGGCATTAATCGACGGTATGGTTGACCATGCCAGTGATGATGAGTTGTTTGCCAGTGGGTATTTGCGTGGCCACCTGACATTAGCCATCGCAGAACTGGAAAGTGGTGATGACCACTCCGCTCAGGCGGTGCATACGACCGTTAGCCAGAGTCTGGAAAAAGCCATTGGTGCTGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAA", + "dna_sequence_length": 279, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2310", + "location": [ + [ + "NC_000913", + 2444169, + "-", + 279 + ] + ], + "md5": "686cc9ec5fd6301ed2b3a5d3b5ef3baa", + "parent_gene": "", + "protein_md5": "5330ef2469142976e5ec195c1e8c17c5", + "protein_translation": "MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007686" + ], + [ + "gene_synonym", + "ECK2320" + ], + [ + "gene_synonym", + "EcoGene:EG14116" + ], + [ + "gene_synonym", + "GI:16130261" + ], + [ + "gene_synonym", + "GeneID:946807" + ], + [ + "gene_synonym", + "JW5381" + ], + [ + "gene_synonym", + "NP_416829.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76938" + ], + [ + "gene_synonym", + "b2326" + ], + [ + "gene_synonym", + "epmC" + ], + [ + "gene_synonym", + "yfcM" + ] + ], + "dna_sequence": "ATGAACAGTACACACCACTACGAGCAGTTGATTGAAATTTTTAATAGCTGCTTTGCCGATGATTTTAATACCCGTCTGATTAAAGGCGACGACGAACCGATCTATCTTCCTGCTGATGCGGAAGTACCGTATAACCGAATCGTCTTTGCTCATGGCTTTTATGCCAGCGCAATTCATGAGATTTCGCACTGGTGTATTGCCGGGAAAGCGCGCCGTGAGCTGGTTGATTTCGGCTACTGGTATTGCCCGGACGGACGCGATGCCCAAACGCAAAGCCAGTTTGAAGATGTTGAAGTGAAGCCGCAGGCGCTCGACTGGTTGTTCTGTGTGGCGGCGGGATATCCGTTTAACGTCAGTTGCGACAATCTGGAAGGGGATTTCGAACCGGATCGTGTGGTGTTTCAACGGCGAGTACATGCGCAGGTGATGGATTATCTGACAAATGGCATTCCGGAACGTCCGGCACGCTTCATTAAAGCACTACAAAATTATTATCACACGCCGGAACTTACGGCGGAACAGTTCCCGTGGCCGGAAGCGCTCAACTGA", + "dna_sequence_length": 549, + "functions": [ + "Elongation Factor P Lys34 hydroxylase" + ], + "id": "CDS_2311", + "location": [ + [ + "NC_000913", + 2444751, + "-", + 549 + ] + ], + "md5": "da7335818b520c49afd729cac1a95924", + "parent_gene": "", + "protein_md5": "bc76af2c847ecf8f8e2068c3c0635024", + "protein_translation": "MNSTHHYEQLIEIFNSCFADDFNTRLIKGDDEPIYLPADAEVPYNRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKALQNYYHTPELTAEQFPWPEALN", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007689" + ], + [ + "gene_synonym", + "ECK2321" + ], + [ + "gene_synonym", + "EcoGene:EG11144" + ], + [ + "gene_synonym", + "GI:16130262" + ], + [ + "gene_synonym", + "GeneID:946808" + ], + [ + "gene_synonym", + "JW2324" + ], + [ + "gene_synonym", + "NP_416830.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD30" + ], + [ + "gene_synonym", + "b2327" + ], + [ + "gene_synonym", + "yfcA" + ] + ], + "dna_sequence": "ATGGAAACGTTTAATAGCCTGTTTATGGTTTCCCCGCTGTTGCTGGGAGTTCTCTTTTTTGTCGCCATGCTGGCGGGATTTATCGACTCGATTGCCGGTGGCGGTGGGTTACTCACCATTCCGGCATTGATGGCAGCGGGGATGTCTCCCGCTAATGCGCTGGCAACCAATAAACTGCAAGCCTGCGGCGGCTCTATTTCCGCTACTATCTACTTTATTCGCCGCAAAGTGGTTAGTTTAAGCGATCAGAAACTCAATATCGCCATGACCTTTGTCGGCTCAATGAGCGGCGCACTGCTGGTGCAATACGTTCAGGCTGATGTCTTACGGCAGATTTTGCCCATTCTGGTAATTTGTATCGGCCTCTATTTCTTGCTGATGCCAAAGCTAGGTGAAGAAGACCGCCAGCGCCGGATGTACGGTTTACCCTTCGCGTTAATAGCCGGTGGCTGCGTCGGTTTTTATGATGGATTCTTTGGCCCGGCTGCCGGGTCGTTTTACGCGCTGGCCTTCGTTACGCTGTGCGGATTTAACCTCGCCAAAGCCACGGCTCACGCCAAATTACTCAACGCAACGTCAAACATCGGCGGTTTACTGCTGTTTATTCTCGGCGGCAAAGTGATTTGGGCGACGGGCTTTGTCATGCTGGTGGGGCAGTTCCTCGGCGCGCGCATGGGTTCACGACTGGTGTTGAGCAAAGGACAAAAGCTGATCCGCCCGATGATTGTTATCGTCTCGGCGGTGATGAGTGCCAAATTACTTTACGACAGCCACGGACAGGAGATCCTCCACTGGTTGGGGATGAACTAA", + "dna_sequence_length": 810, + "functions": [ + "TauE/TSUP family inner membrane protein" + ], + "id": "CDS_2312", + "location": [ + [ + "NC_000913", + 2445560, + "-", + 810 + ] + ], + "md5": "f3ffc7cf8ca6429d92af20909444d5a8", + "parent_gene": "", + "protein_md5": "2115501e2a116e8ff68efd8802eec3f9", + "protein_translation": "METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007691" + ], + [ + "gene_synonym", + "ECK2322" + ], + [ + "gene_synonym", + "EcoGene:EG10580" + ], + [ + "gene_synonym", + "GI:16130263" + ], + [ + "gene_synonym", + "GeneID:946812" + ], + [ + "gene_synonym", + "JW2325" + ], + [ + "gene_synonym", + "NP_416831.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0T5" + ], + [ + "gene_synonym", + "b2328" + ], + [ + "gene_synonym", + "mepA" + ] + ], + "dna_sequence": "ATGAATAAAACCGCGATTGCGCTGCTGGCTCTGCTTGCCAGTAGCGCCAGCCTGGCAGCGACGCCGTGGCAAAAAATAACCCAACCTGTGCCGGGTAGCGCACAATCGATAGGCAGTTTTTCTAATGGCTGTATTGTCGGCGCTGACACGCTGCCGATACAGTCCGAACATTATCAGGTCATGCGTACCGATCAGCGTCGCTATTTCGGTCACCCGGATCTGGTGATGTTTATCCAGCGTCTGAGTAGCCAGGTGAGCAATCTGGGCATGGGTACGGTGCTGATTGGCGATATGGGGATGCCCGCTGGTGGGCGTTTCAACGGCGGTCATGCCAGCCACCAGACCGGACTGGATGTCGATATCTTTCTGCAACTGCCGAAAACTCGCTGGACCTCCGCGCAGCTCTTGCGCCCGCAAGCACTGGACTTAGTTTCCCGCGACGGTAAACACGTTGTCTCCACGCTGTGGAAGCCAGAAATTTTCAGCTTGATCAAACTCGCCGCCCAGGACAAAGACGTCACGCGCATTTTTGTTAATCCGGCGATTAAACAACAACTTTGCCTTGATGCGGGCACCGATCGCGACTGGTTGCGCAAAGTGCGACCCTGGTTCCAGCATCGCGCGCATATGCATGTACGATTACGTTGCCCTGCCGATAGTCTGGAGTGTGAAGATCAACCTTTACCGCCATCAGGCGATGGTTGCGGGGCAGAACTGCAAAGCTGGTTTGAACCTCCAAAACCGGGAACAACAAAGCCTGAGAAGAAGACACCGCCTCCGTTGCCGCCTTCCTGCCAGGCGCTACTGGATGAGCACGTGATCTAA", + "dna_sequence_length": 825, + "functions": [ + "murein DD-endopeptidase" + ], + "id": "CDS_2313", + "location": [ + [ + "NC_000913", + 2446384, + "-", + 825 + ] + ], + "md5": "e79b0e1b015839cf8391bdc5455ea8aa", + "parent_gene": "", + "protein_md5": "d1aae2b452c937d9f0a6166ced75b9d7", + "protein_translation": "MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007693" + ], + [ + "gene_synonym", + "ECK2323" + ], + [ + "gene_synonym", + "EcoGene:EG10075" + ], + [ + "gene_synonym", + "GI:16130264" + ], + [ + "gene_synonym", + "GeneID:946814" + ], + [ + "gene_synonym", + "JW2326" + ], + [ + "gene_synonym", + "NP_416832.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12008" + ], + [ + "gene_synonym", + "aroC" + ], + [ + "gene_synonym", + "b2329" + ] + ], + "dna_sequence": "ATGGCTGGAAACACAATTGGACAACTCTTTCGCGTAACCACCTTCGGCGAATCGCACGGGCTGGCGCTCGGCTGCATCGTCGATGGTGTTCCGCCAGGCATTCCGCTGACGGAAGCGGACCTGCAACATGACCTCGACCGTCGTCGCCCTGGGACATCGCGCTATACCACCCAGCGCCGCGAGCCGGATCAGGTCAAAATTCTCTCCGGTGTTTTTGAAGGCGTTACTACCGGCACCAGCATTGGCTTGTTGATCGAAAACACTGACCAGCGCTCTCAGGATTACAGTGCGATTAAGGACGTTTTCCGTCCAGGCCATGCCGATTACACCTACGAACAAAAATACGGTCTGCGCGATTATCGCGGCGGTGGACGTTCTTCCGCCCGCGAAACCGCCATGCGCGTGGCGGCAGGAGCTATTGCCAAAAAATATCTCGCCGAGAAATTTGGTATTGAAATCCGTGGCTGCCTGACCCAGATGGGCGACATTCCGCTGGATATCAAAGACTGGTCGCAGGTCGAGCAAAATCCGTTTTTTTGCCCGGACCCCGACAAAATCGACGCGTTAGACGAGTTGATGCGTGCGCTGAAAAAAGAGGGCGACTCCATCGGCGCTAAAGTCACCGTTGTTGCCAGTGGCGTTCCTGCCGGACTTGGCGAGCCGGTCTTTGACCGCCTGGATGCTGACATCGCCCATGCGCTGATGAGCATCAACGCGGTGAAAGGCGTGGAAATTGGCGACGGCTTTGACGTGGTGGCGCTGCGCGGCAGCCAGAACCGCGATGAAATCACCAAAGACGGTTTCCAGAGCAACCATGCGGGCGGCATTCTCGGCGGTATCAGCAGCGGGCAGCAAATCATTGCCCATATGGCGCTGAAACCGACCTCCAGCATTACCGTGCCGGGTCGTACCATTAACCGCTTTGGCGAAGAAGTTGAGATGATCACCAAAGGCCGTCACGATCCCTGTGTCGGGATCCGCGCAGTGCCGATCGCAGAAGCGATGCTGGCGATCGTTTTAATGGATCACCTGTTACGGCAACGGGCGCAAAATGCCGATGTGAAGACTGATATTCCACGCTGGTAA", + "dna_sequence_length": 1086, + "functions": [ + "chorismate synthase" + ], + "id": "CDS_2314", + "location": [ + [ + "NC_000913", + 2447473, + "-", + 1086 + ] + ], + "md5": "f0f133042badf87705bb0a27af70b2d8", + "parent_gene": "", + "protein_md5": "48e6499ecd1bd82dfa8d2b0ca019d341", + "protein_translation": "MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007695" + ], + [ + "gene_synonym", + "ECK2324" + ], + [ + "gene_synonym", + "EcoGene:EG12449" + ], + [ + "gene_synonym", + "GI:90111419" + ], + [ + "gene_synonym", + "GeneID:946805" + ], + [ + "gene_synonym", + "JW5841" + ], + [ + "gene_synonym", + "NP_416833.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39199" + ], + [ + "gene_synonym", + "b2330" + ], + [ + "gene_synonym", + "prmB" + ], + [ + "gene_synonym", + "yfcB" + ] + ], + "dna_sequence": "GTGGATAAAATTTTCGTTGATGAAGCAGTAAATGAGCTGCAAACCATTCAGGACATGTTGCGCTGGTCGGTGAGCCGCTTCAGCGCGGCAAATATCTGGTACGGTCACGGTACCGATAACCCGTGGGATGAAGCCGTACAGCTGGTGTTGCCTTCGCTCTACCTGCCGCTGGATATTCCGGAAGATATGCGCACCGCGCGTCTGACCTCCAGCGAAAAACACCGTATTGTTGAACGCGTGATCCGCCGCGTCAATGAACGCATTCCGGTGGCTTACCTGACCAACAAAGCGTGGTTCTGCGGCCATGAATTTTACGTCGATGAACGCGTGCTGGTGCCGCGCTCGCCGATTGGTGAACTGATCAACAATAAATTTGCCGGACTTATCAGCAAGCAACCGCAGCATATTTTAGATATGTGTACTGGTAGCGGCTGCATCGCCATTGCCTGTGCTTATGCCTTCCCGGATGCAGAAGTCGACGCGGTGGATATCTCTCCAGACGCGCTGGCGGTTGCTGAACAGAACATCGAAGAACACGGTCTGATCCACAACGTCATTCCGATTCGTTCCGATCTGTTCCGCGACTTGCCGAAAGTGCAGTACGACCTGATTGTCACTAACCCGCCGTATGTCGATGCGGAAGATATGTCCGACCTGCCAAACGAATACCGCCACGAGCCGGAACTGGGCCTGGCATCTGGCACTGACGGCCTGAAACTGACGCGTCGCATTCTCGGTAACGCGGCAGATTACCTTGCTGATGATGGCGTGTTGATTTGTGAAGTCGGCAACAGCATGGTACATCTTATGGAACAATATCCGGATGTTCCGTTCACCTGGCTGGAGTTTGATAACGGCGGCGATGGTGTGTTTATGCTCACCAAAGAGCAGCTTATTGCCGCACGAGAACATTTCGCGATTTATAAAGATTAA", + "dna_sequence_length": 933, + "functions": [ + "N5-glutamine methyltransferase" + ], + "id": "CDS_2315", + "location": [ + [ + "NC_000913", + 2448440, + "-", + 933 + ] + ], + "md5": "ccd3f1d3a2dacd5a9c8bb61ae7fd668d", + "parent_gene": "", + "protein_md5": "5be947384dd27fa2d2a2508e53a21ef7", + "protein_translation": "MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLIAAREHFAIYKD", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007698" + ], + [ + "gene_synonym", + "ECK2325" + ], + [ + "gene_synonym", + "EcoGene:EG14117" + ], + [ + "gene_synonym", + "GI:16130266" + ], + [ + "gene_synonym", + "GeneID:944847" + ], + [ + "gene_synonym", + "JW2328" + ], + [ + "gene_synonym", + "NP_416834.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8B2" + ], + [ + "gene_synonym", + "b2331" + ], + [ + "gene_synonym", + "smrB" + ], + [ + "gene_synonym", + "yfcN" + ] + ], + "dna_sequence": "ATGAAAAAGAAAACAACACTTAGCGAGGAGGACCAGGCTCTGTTTCGCCAGTTGATGGCGGGGACTCGCAAGATTAAGCAGGACACGATTGTCCACCGACCGCAGCGTAAAAAAATCAGCGAAGTGCCGGTGAAACGCTTGATCCAGGAGCAGGCTGATGCCAGCCATTATTTCTCCGATGAGTTTCAGCCGTTATTAAATACCGAAGGTCCGGTGAAATATGTTCGCCCGGATGTCAGCCATTTTGAGGCGAAGAAACTGCGCCGTGGCGATTATTCGCCGGAGTTGTTTTTGGATTTACACGGTCTGACGCAGCTGCAGGCCAAGCAGGAACTGGGGGCGTTGATTGCCGCCTGCCGCCGTGAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGA", + "dna_sequence_length": 552, + "functions": [ + "putative DNA endonuclease" + ], + "id": "CDS_2316", + "location": [ + [ + "NC_000913", + 2448606, + "+", + 552 + ] + ], + "md5": "1d292f8e5186eacce5515f3f77bed0ba", + "parent_gene": "", + "protein_md5": "173e7a05f33e34e22f1201d66fde48fd", + "protein_translation": "MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007700" + ], + [ + "gene_synonym", + "ECK2326" + ], + [ + "gene_synonym", + "EcoGene:EG14118" + ], + [ + "gene_synonym", + "GI:90111420" + ], + [ + "gene_synonym", + "GeneID:946620" + ], + [ + "gene_synonym", + "JW2329" + ], + [ + "gene_synonym", + "NP_416835.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76498" + ], + [ + "gene_synonym", + "b2332" + ], + [ + "gene_synonym", + "yfcO" + ] + ], + "dna_sequence": "ATGAAAATACTACGATGGTTGTTCGCTCTGGTCATGCTTATTGCTACTACAGAAGCTATGGCTGCCGGGCATAGCGTTGACGTTTACTACGGTTACAACGGTGATTCGCGTAATATTGCGACTTTTAATTTAAAAATAATGATGCCATCCGCAGTGTACGTTGGTGAATATAAAAGTAGTCAATGGCTCATGACTGGGGAAATATTGCAAAATGTGAGCTGGAGTGGTCCTCCTCCTGCCCCTTCGGTTAAGCTGATTGGCTACCATCAAAATATCAACAAAGCAAGTTGTCCTGGATTACCGTCTGGGTGGAACTGCGGGTATTATACATTTGAGGTTATTGTCTCTGCAGAGATTGAATCTTACTTTTCTTGTCCATGGTTGGTTATTATGAATGACTCTGAAGCCTCTCCAGGGGGCGTGACGTATCAGGGGCCTGATAGTCACGACACGATTTGTCCATCCGTTTCTGTTCAACCTTATGACGTTTCATGGAATGAGAATTATGTCAGTAAGTCAAAACTGCTCACCCTGCAGTCGACGGGCGGTGTGGTTGAGAAAACGCTTTCAACGTATTTGATGAAAGATGGGAAGTTGTGCGACAGTACGCAGATGAATGAAACAGGTGGTTACTGCCGCTGGGTTGCACAGATGATAACTTTTACCGCGTCGGGATGTGACAAGGCGGAAGTCTCGGTCACGCCAAATCGACACCCTATAACGGACAAACAGTTACACGATATGGTCGTGCGTGTTGATACCAGCAGTATGCAGCCAATCGATTCTACTTGCCGGTTCCAGTACATACTGAATGAGTTGTAG", + "dna_sequence_length": 822, + "functions": [ + "DUF2544 family putative outer membrane protein" + ], + "id": "CDS_2317", + "location": [ + [ + "NC_000913", + 2450049, + "-", + 822 + ] + ], + "md5": "e4cc049b2aaa25f48628e56531a967e3", + "parent_gene": "", + "protein_md5": "1ee8b6345d15bcef9d70da9b47e8ae17", + "protein_translation": "MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNLKIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007702" + ], + [ + "gene_synonym", + "ECK2327" + ], + [ + "gene_synonym", + "EcoGene:EG14119" + ], + [ + "gene_synonym", + "GI:16130268" + ], + [ + "gene_synonym", + "GeneID:946788" + ], + [ + "gene_synonym", + "JW2330" + ], + [ + "gene_synonym", + "NP_416836.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76499" + ], + [ + "gene_synonym", + "b2333" + ], + [ + "gene_synonym", + "yfcP" + ] + ], + "dna_sequence": "ATGAATAAATCAATGATTCAGTCCGGTGGTTACGTCCTGTTAGCGGGGCTGATATTGGCAATGAGTAGCACGTTATTCGCGGCAGATAATAATCTGCATTTCTCCGGTAATTTATTAAGTAAATCCTGTGCGCTGGTGGTGGATGGCCAATATCTGGCAGAGGTGCGCTTTCCCACGGTCAGTCGTCAGGATTTGAACGTTGCAGGCCAGTCCGCTCGTGTACCCGTAGTCTTTAAGCTGAAAGATTGCAAAGGGCCGGCGGGATACAACGTAAAAGTCACGCTCACGGGGGTAGAAGACAGCGAACAACCCGGTTTTCTGGCACTGGATACGTCATCAACCGCTCAGGGAGTGGGAATTGGCATGGAAAAAACCGACGGAATGCAGGTTGCCATCAACAATACAAATGGGGCGACCTTTGCGCTAACCAATGGCAATAACGATATCAATTTCAGAGCCTGGCTACAGGCGAAAAGCGGCCGTGATGTGACGATCGGTGAATTTACCGCCTCTTTAACTGCGACATTTGAGTATATTTAA", + "dna_sequence_length": 540, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2318", + "location": [ + [ + "NC_000913", + 2450590, + "-", + 540 + ] + ], + "md5": "82da71a2532558781a2fef8e13873ef3", + "parent_gene": "", + "protein_md5": "a1c02f54c40b2f48805cdf6882278af8", + "protein_translation": "MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007705" + ], + [ + "gene_synonym", + "ECK2328" + ], + [ + "gene_synonym", + "EcoGene:EG14120" + ], + [ + "gene_synonym", + "GI:16130269" + ], + [ + "gene_synonym", + "GeneID:946779" + ], + [ + "gene_synonym", + "JW2331" + ], + [ + "gene_synonym", + "NP_416837.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76500" + ], + [ + "gene_synonym", + "b2334" + ], + [ + "gene_synonym", + "yfcQ" + ] + ], + "dna_sequence": "ATGAGAAAGACTTTCTTAACCCTGCTTTGTGTCAGTAGCGCCATAGCTCATGCTGCTGATGAAGACATCACCTTTCACGGGACATTATTGTCACCGCCAACCTGTAGCATCAGCGGTGGTAAAACCATTGAAGTCGAATTTCGCGATCTCATTATCGACGACATCAACGGCAACTATGGTCGTAAAGAGGTGCCATATGAACTCACTTGTGACTCGACGACCCGTCATCCAGATTGGGAGATGACCCTCACCTGGACTGGTACACAAACCAGTTTTAATGATGCAGCAATTGAAACTGATGTACCCGGTTTTGGTATCGAGCTTCAGCACGATGGTCAGCGTTTTAAACTCAATACTCCGCTTGCTATCAACGCCACTGATTTTACGCAAAAGCCGAAGCTGGAGGCCGTACCGGTAAAAGCGAGTGATGCTGTGTTAAGCGATACGAATTTTTCGGCTTACGCAACATTACGGGTGGATTATCAATGA", + "dna_sequence_length": 489, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2319", + "location": [ + [ + "NC_000913", + 2451075, + "-", + 489 + ] + ], + "md5": "b8fe7b2cc93796c8897a51cc229b0df1", + "parent_gene": "", + "protein_md5": "98e401734573007e69d4c3791ddd2027", + "protein_translation": "MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007707" + ], + [ + "gene_synonym", + "ECK2329" + ], + [ + "gene_synonym", + "EcoGene:EG14121" + ], + [ + "gene_synonym", + "GI:16130270" + ], + [ + "gene_synonym", + "GeneID:946818" + ], + [ + "gene_synonym", + "JW2332" + ], + [ + "gene_synonym", + "NP_416838.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76501" + ], + [ + "gene_synonym", + "b2335" + ], + [ + "gene_synonym", + "yfcR" + ] + ], + "dna_sequence": "ATGACGGGGGGAGTTATGAGTCAAAAGTTTGTAGTGGGCGCAGGGCTGCTGGTATGCAGTGTCTGTAGTTTATCTGCTATGGCTGGTAGTAAACCCGTGGATTTAATTCTGCGCGTGTTGGTCGATGCTCCGCCACCCTGTTCAATCAAGGGCAGCCAGGTAGAGTTCGGCAATATGATTGCTGATAACGTTGATGGCACCAATTATCGGCAAGATGCGAAATACACGTTGAACTGCACAAACAGTCTTGCTAACGACTTGCGGATGCAACTTAAGGGCAATACCTCAACGATTAACGGCGAAACGGTACTCAGTACCAATATCACCGGGCTGGGCATTCGGATAGAAAATAGCGCCGATAACTCATTGTTTGCCGTCGGTGAAAATAGCTGGACGCCATTTAATATCAATAACCAGCCACAGTTGAAGGCTGTACCTGTGAAGGCAAGCGGGGCGCAACTTGCTGCGGGCGAGTTTAACGCCAGTTTGACCATGGTGGTGGACTATCAATGA", + "dna_sequence_length": 513, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2320", + "location": [ + [ + "NC_000913", + 2451584, + "-", + 513 + ] + ], + "md5": "b9130f8da849625f4457a0693f0ff23f", + "parent_gene": "", + "protein_md5": "2a3c5f7d12bc32917bdffe843af34763", + "protein_translation": "MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ", + "protein_translation_length": 170, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007709" + ], + [ + "gene_synonym", + "ECK2330" + ], + [ + "gene_synonym", + "EcoGene:EG14122" + ], + [ + "gene_synonym", + "GI:16130271" + ], + [ + "gene_synonym", + "GeneID:946418" + ], + [ + "gene_synonym", + "JW2333" + ], + [ + "gene_synonym", + "NP_416839.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77599" + ], + [ + "gene_synonym", + "b2336" + ], + [ + "gene_synonym", + "yfcS" + ] + ], + "dna_sequence": "ATGTCTGATTTACTTTGCTCTGCCAAATTGGGTGCTATGACGCTGGCGTTACTGCTTAGCGCTACCAGTTTGTCTGCCCTGGCGTCTGTAACGCCAGATCGTACCCGTTTGATATTTAATGAAAGCGACAAATCAATCAGCGTGACGCTGCGTAATAACGATCCGAAACTCCCTTATCTGGCTCAAAGCTGGATTGAAGATGAAAAGGGTAACAAGATCACCTCGCCGTTAACTGTGCTGCCGCCAGTGCAACGCATCGATTCAATGATGAACGGGCAGGTAAAAGTGCAGGGAATGCCGGATATCAACAAATTGCCAGCCGATCGTGAAAGCATGTTCTACTTTAACGTGCGCGAGATCCCGCCAAAATCAAACAAACCCAATACCCTGCAAATCGCGCTGCAAACGCGTATCAAGTTGTTCTGGCGACCAAAGGCGCTGGAAAAGGTCAGTATGAAAAGTCCGTGGCAGCACAAGGTGACGCTCACCCGCAGCGGTCAGGCATTTACCGTCAATAACCCAACGCCGTACTACGTGATTATCAGCAACGCCAGTGCGCAGAAAAACGGTAATCCAGCTGCAGGGTTCTCGCCTCTGGTCATTGAGCCGAAAACCACGGTACCGCTGAATGTGAAAATGGATAGCGTACCGGTGCTGACTTACGTCAACGACTTTGGCGCACGGATGCCGCTGTTCTTCCAGTGCAATGGCAACAGCTGCCAGGTGGATGAAGAGCAGAGCCGCAAAGGCTGA", + "dna_sequence_length": 753, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_2321", + "location": [ + [ + "NC_000913", + 2452336, + "-", + 753 + ] + ], + "md5": "a33111579160872a5433ef1c7b483430", + "parent_gene": "", + "protein_md5": "54da8f75d4446d58c276021d8a45f9c3", + "protein_translation": "MSDLLCSAKLGAMTLALLLSATSLSALASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKITSPLTVLPPVQRIDSMMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALEKVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVPLNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQSRKG", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007711" + ], + [ + "gene_synonym", + "ASAP:ABE-0007713" + ], + [ + "gene_synonym", + "ECK2332" + ], + [ + "gene_synonym", + "EcoGene:EG14124" + ], + [ + "gene_synonym", + "GeneID:1450268" + ], + [ + "gene_synonym", + "JW2334" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77196" + ], + [ + "gene_synonym", + "b4661" + ], + [ + "gene_synonym", + "yfcT" + ], + [ + "gene_synonym", + "yfcU" + ] + ], + "dna_sequence": "ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGTCTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTTCCAGCCAGGGGTATGTTGAGCCCGGAAAATACAATTTACAGGTTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGATATTTACTGGTATGCTGGTGAAGATGACGTTAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTGGCGCAGTTTGGTTTAAAAGAAGACGTGGCGAAAAATCTGCAATGGAGCCACGATGGTAAATGCCTGAAGCCCGGTCAACTGGAAGGCGTGGAAATTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTACCGCAGGCTTACCTCGAATATACCTGGCCCGACTGGGATCCACCTTCTCGTTGGGATGATGGCATCTCCGGGATCATTGCGGACTACAGCATCACTGCGCAAACACGACACGAAGAAAATGGCGGCGATGACAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCATGGCGTATGCGCGCTGACTGGCAGACCAACTATCAACATACGCGCAGTAATGATGATGACGATGAATTTGGCGGCGATGACACACAAAAAAAATGGGAGTGGAGTCGCTATTATGCCTGGCGGGCGTTACCGTCATTAAAAGCCAAACTGGCGCTGGGCGAAGATTACCTCAATTCCGATATTTTCGACGGTTTTAATTATGTTGGTGGCAGTGTCAGCACTGACGATCAAATGTTGCCTCCCAATCTGCGCGGCTACGCGCCAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAGGTTCCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCCGTCTCCGGTACGTTGCATATTCGCATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGCCCAGGCCAGGTTCGCTATAAGATCATGATGGGACGTCCGCAAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGCATCGCTAACGGCTGGTCGTTATATGGCGGTGCGCTGGGTGATGAAAACTATCAGTCTGCGGCGCTGGGCGTCGGTCGCGATTTGTCTACCTTCGGCGCGGTCGCGTTTGATGTTACTCATTCGCATACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGCTGGACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTCACTTTCGCTGGATATCGCTTCTCGGAAGAGAACTTTATGACCATGAGCGAGTATCTGGATGCCAGTGACAGCGAAATGGTCCGTACGGGCAACGACAAAGAGATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCTACTGGGATCGTGAGGAGCAGACAAACTACAACATCATGCTCTCCCACTATTTCAATATGGGCAGCATTCGTAATATGAGCGTTTCCCTGACTGGCTACCGCTACGAGTATGACAACCGGGCGGATAAGGGCATGTAGATTTCGCTCAGTATGCCGTGGGGCGACAACAGTACCGTTAGCTATAACGGCAACTATGGCAGTGGGACGGACAGCAGCCAGGTCGGTTATTTTAGCCGTGTCGATGACGCGACTCACTATCAGTTGAACATCGGCACCAGTGACAAACACACCAGCGTTGATGGCTACTACAGCCATGATGGTTCGCTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGCAACGCTTACTACCCACGGCGGCGCACTTCACCGTACCCAGAATATGGGCGGGACACGCCTGCTGATTGATGCCGATGGCGTTGCCGATGTTCCGGTGGAAGGTAACGGGGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTTAACAATTATTATCGCAATCAGGCGTATATCGACCTCAACAAATTGCCGGAAAACGCCGAAGCAACCCAGTCGGTGGTGCAAGCCACGCTAACTGAAGGAGCCATTGGCTACCGCAAATTTGCCGTCATCAGTGGTCAAAAAGCGATGGCGGTGCTGCGTTTACAAGATGGCAGCCATCCACCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGTAGTGTCTATCTGGCTGGGGTGAAACCTGGCGAACATATGAGTGTGTTCTGGAGTGGTGTTGCGCATTGCGATATCAACCTGCCGGACCCGCTGCCTGCCGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGCGCCGGTTGTTCCTGATGACATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCGATCCCCCTGTTTCTGTTTCAGCTAACCAATAA", + "dna_sequence_length": 2646, + "id": "CDS_2322", + "location": [ + [ + "NC_000913", + 2455001, + "-", + 2646 + ] + ], + "md5": "ced5493e8350aca2725bde795311927c", + "parent_gene": "", + "protein_md5": "b2037c8e3175a2eadb9c4aaa837891fd", + "protein_translation": "MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDVSKSYACLTPELVAQFGLKEDVAKNLQWSHDGKCLKPGQLEGVEIKADLSQSALVISLPQAYLEYTWPDWDPPSRWDDGISGIIADYSITAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFGGDDTQKKWEWSRYYAWRALPSLKAKLALGEDYLNSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGGFFSGAEASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSEMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNMSVSLTGYRYEYDNRADKGM", + "protein_translation_length": 578, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007715" + ], + [ + "gene_synonym", + "ECK2333" + ], + [ + "gene_synonym", + "EcoGene:EG14125" + ], + [ + "gene_synonym", + "GI:16130272" + ], + [ + "gene_synonym", + "GeneID:949109" + ], + [ + "gene_synonym", + "JW2336" + ], + [ + "gene_synonym", + "NP_416841.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77288" + ], + [ + "gene_synonym", + "b2339" + ], + [ + "gene_synonym", + "yfcV" + ] + ], + "dna_sequence": "ATGAGTAAGTTTGTTAAAACAGCTATTGCTGCGGCAATGGTGATGGGCGCGTTCACCTCTACGGCAACAATCGCTGCGGGTAACAACGGTACTGCACGTTTTTACGGCACCATTGAAGACTCAGTGTGTTCTATCGTTCCGGACGATCACAAACTGGAAGTTGATATGGGTGATATCGGTGCCGAAAAACTGAAAAATAACGGCACCACCACGCCGAAAAATTTCCAGATTCGCCTGCAAGATTGCGTATTTGATACTCAGGAAACAATGACCACTACCTTTACTGGTACCGTTTCTTCTGCAAATAGCGGCAATTATTACACCATTTTCAATACCGATACCGGTGCGGCATTTAACAATGTTAGCCTGGCGATCGGTGACTCTCTGGGTACCTCTTACAAAAGCGGCATGGGTATTGACCAGAAAATCGTGAAAGATACTGCCACTAATAAAGGCAAAGCGAAGCAGACTCTGAACTTTAAAGCCTGGCTGGTCGGCGCAGCTGATGCGCCAGATCTGGGTAATTTCGAAGCAAATACCACCTTCCAGATTACTTACCTGTAA", + "dna_sequence_length": 564, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2323", + "location": [ + [ + "NC_000913", + 2455646, + "-", + 564 + ] + ], + "md5": "bb859ccf49fcba1a13bec8a6ccf54446", + "parent_gene": "", + "protein_md5": "d5af549ce6b88312c9990806155953c4", + "protein_translation": "MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007720" + ], + [ + "gene_synonym", + "ECK2334" + ], + [ + "gene_synonym", + "EcoGene:EG14126" + ], + [ + "gene_synonym", + "GI:16130273" + ], + [ + "gene_synonym", + "GeneID:946815" + ], + [ + "gene_synonym", + "JW2337" + ], + [ + "gene_synonym", + "NP_416842.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76502" + ], + [ + "gene_synonym", + "b2340" + ], + [ + "gene_synonym", + "sixA" + ], + [ + "gene_synonym", + "yfcW" + ] + ], + "dna_sequence": "ATGCAAGTTTTTATCATGCGTCACGGCGACGCAGCCCTCGATGCCGCCAGTGATTCCGTTCGTCCTCTGACCACTAATGGTTGTGACGAATCTCGCCTGATGGCGAACTGGCTGAAAGGTCAAAAAGTGGAAATCGAACGCGTTCTGGTGAGCCCGTTCCTGCGAGCCGAGCAAACACTGGAAGAAGTAGGGGATTGTCTGAACCTGCCTTCCAGTGCAGAAGTTCTGCCGGAGTTAACGCCCTGCGGCGATGTTGGTCTGGTCAGTGCCTATTTGCAGGCGTTGACCAATGAAGGTGTTGCTTCGGTACTGGTGATCTCTCACTTACCGTTAGTCGGGTATCTGGTTGCCGAGTTATGTCCGGGCGAAACGCCGCCTATGTTTACCACCTCGGCCATTGCCAGCGTAACGCTTGATGAAAGCGGAAACGGCACATTCAACTGGCAGATGAGCCCGTGTAATCTGAAGATGGCAAAAGCTATCTGA", + "dna_sequence_length": 486, + "functions": [ + "phosphohistidine phosphatase" + ], + "id": "CDS_2324", + "location": [ + [ + "NC_000913", + 2456812, + "-", + 486 + ] + ], + "md5": "54a6e6e36da7b4bced7ff2c10be02cbc", + "parent_gene": "", + "protein_md5": "bc7bf55eca457e7f3382f1100b079077", + "protein_translation": "MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007723" + ], + [ + "gene_synonym", + "ECK2335" + ], + [ + "gene_synonym", + "EcoGene:EG14127" + ], + [ + "gene_synonym", + "GI:16130274" + ], + [ + "gene_synonym", + "GeneID:949097" + ], + [ + "gene_synonym", + "JW2338" + ], + [ + "gene_synonym", + "NP_416843.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77399" + ], + [ + "gene_synonym", + "b2341" + ], + [ + "gene_synonym", + "fadJ" + ], + [ + "gene_synonym", + "yfcX" + ] + ], + "dna_sequence": "ATGGAAATGACATCAGCGTTTACCCTTAATGTTCGTCTGGACAACATTGCCGTTATCACCATCGACGTACCGGGTGAGAAAATGAATACCCTGAAGGCGGAGTTTGCCTCGCAGGTGCGCGCCATTATTAAGCAACTCCGTGAAAACAAAGAGTTGCGAGGCGTGGTGTTTGTCTCCGCTAAACCGGACAACTTCATTGCTGGCGCAGACATCAACATGATCGGCAACTGCAAAACGGCGCAAGAAGCGGAAGCTCTGGCGCGGCAGGGCCAACAGTTGATGGCGGAGATTCATGCTTTGCCCATTCAGGTTATCGCGGCTATTCATGGCGCTTGCCTGGGTGGTGGGCTGGAGTTGGCGCTGGCGTGCCACGGTCGCGTTTGTACTGACGATCCTAAAACGGTGCTCGGTTTGCCTGAAGTACAACTTGGATTGTTACCCGGTTCAGGCGGCACCCAGCGTTTACCGCGTCTGATAGGCGTCAGCACAGCATTAGAGATGATCCTCACCGGAAAACAACTTCGGGCGAAACAGGCATTAAAGCTGGGGCTGGTGGATGACGTTGTTCCGCACTCCATTCTGCTGGAAGCCGCTGTTGAGCTGGCAAAGAAGGAGCGCCCATCTTCCCGCCCTCTACCTGTACGCGAGCGTATTCTGGCGGGGCCGTTAGGTCGTGCGCTGCTGTTCAAAATGGTCGGCAAGAAAACAGAACACAAAACTCAAGGCAATTATCCGGCGACAGAACGCATCCTGGAGGTTGTTGAAACGGGATTAGCGCAGGGCACCAGCAGCGGTTATGACGCCGAAGCTCGGGCGTTTGGCGAACTGGCGATGACGCCACAATCGCAGGCGCTGCGTAGTATCTTTTTTGCCAGTACGGACGTGAAGAAAGATCCCGGCAGTGATGCGCCGCCTGCGCCATTAAACAGCGTGGGGATTTTAGGTGGTGGCTTGATGGGCGGCGGTATTGCTTATGTCACTGCTTGTAAAGCGGGGATTCCGGTCAGAATTAAAGATATCAACCCGCAGGGCATAAATCATGCGCTGAAGTACAGTTGGGATCAGCTGGAGGGCAAAGTTCGCCGTCGTCATCTCAAAGCCAGCGAACGTGACAAACAGCTGGCATTAATCTCCGGAACGACGGACTATCGCGGCTTTGCCCATCGCGATCTGATTATTGAAGCGGTGTTTGAAAATCTCGAATTGAAACAACAGATGGTGGCGGAAGTTGAGCAAAATTGCGCCGCTCATACCATCTTTGCTTCGAATACGTCATCTTTACCGATTGGTGATATCGCCGCTCACGCCACGCGACCTGAGCAAGTTATCGGCCTGCATTTCTTCAGTCCGGTGGAAAAAATGCCGCTGGTGGAGATTATTCCTCATGCGGGGACATCGGCGCAAACCATCGCTACCACAGTAAAACTGGCGAAAAAACAGGGTAAAACGCCAATTGTCGTGCGTGACAAAGCCGGTTTTTACGTCAATCGCATCTTAGCGCCTTACATTAATGAAGCTATCCGCATGTTGACCCAAGGTGAACGGGTAGAGCACATTGATGCCGCGCTAGTGAAATTTGGTTTTCCGGTAGGCCCAATCCAACTTTTGGATGAGGTAGGAATCGACACCGGGACTAAAATTATTCCTGTACTGGAAGCCGCTTATGGAGAACGTTTTAGCGCGCCTGCAAATGTTGTTTCTTCAATTTTGAACGACGATCGCAAAGGCAGAAAAAATGGCCGGGGTTTCTATCTTTATGGTCAGAAAGGGCGTAAAAGCAAAAAACAGGTCGATCCCGCCATTTACCCGCTGATTGGCACACAAGGGCAGGGGCGAATCTCCGCACCGCAGGTTGCTGAACGGTGTGTGATGTTGATGCTGAATGAAGCAGTACGTTGTGTTGATGAGCAGGTTATCCGTAGCGTGCGTGACGGGGATATTGGCGCGGTATTTGGCATTGGTTTTCCGCCATTTCTCGGTGGACCGTTCCGCTATATCGATTCTCTCGGCGCGGGCGAAGTGGTTGCAATAATGCAACGACTTGCCACGCAGTATGGTTCCCGTTTTACCCCTTGCGAGCGTTTGGTCGAGATGGGCGCGCGTGGGGAAAGTTTTTGGAAAACAACTGCAACTGACCTGCAATAA", + "dna_sequence_length": 2145, + "functions": [ + "enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase" + ], + "id": "CDS_2325", + "location": [ + [ + "NC_000913", + 2459159, + "-", + 2145 + ] + ], + "md5": "cff96a24b303d9d44b88d0b84a184235", + "parent_gene": "", + "protein_md5": "a8e94f72da7fdfee1e06807df0f9b845", + "protein_translation": "MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ", + "protein_translation_length": 714, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007725" + ], + [ + "gene_synonym", + "ECK2336" + ], + [ + "gene_synonym", + "EcoGene:EG14128" + ], + [ + "gene_synonym", + "GI:16130275" + ], + [ + "gene_synonym", + "GeneID:948823" + ], + [ + "gene_synonym", + "JW2339" + ], + [ + "gene_synonym", + "NP_416844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76503" + ], + [ + "gene_synonym", + "b2342" + ], + [ + "gene_synonym", + "fadI" + ], + [ + "gene_synonym", + "yfcY" + ] + ], + "dna_sequence": "ATGGGTCAGGTTTTACCGCTGGTTACCCGCCAGGGCGATCGTATCGCCATTGTTAGCGGTTTACGTACGCCTTTTGCCCGTCAGGCGACGGCTTTTCATGGCATTCCCGCGGTTGATTTAGGGAAGATGGTGGTAGGCGAACTGCTGGCACGCAGCGAGATCCCCGCCGAAGTGATTGAACAACTGGTCTTTGGTCAGGTCGTACAAATGCCTGAAGCCCCCAACATTGCGCGTGAAATTGTTCTCGGTACGGGAATGAATGTACATACCGATGCTTACAGCGTCAGCCGCGCTTGCGCTACCAGTTTCCAGGCAGTTGCAAACGTCGCAGAAAGCCTGATGGCGGGAACTATTCGAGCGGGGATTGCCGGTGGGGCAGATTCCTCTTCGGTATTGCCAATTGGCGTCAGTAAAAAACTGGCGCGCGTGCTGGTTGATGTCAACAAAGCTCGTACCATGAGCCAGCGACTGAAACTCTTCTCTCGCCTGCGTTTGCGCGACTTAATGCCCGTACCACCTGCGGTAGCAGAATATTCTACCGGCTTGCGGATGGGCGACACCGCAGAGCAAATGGCGAAAACCTACGGCATCACCCGAGAACAGCAAGATGCATTAGCGCACCGTTCGCATCAGCGTGCCGCTCAGGCATGGTCAGACGGAAAACTCAAAGAAGAGGTGATGACTGCCTTTATCCCTCCTTATAAACAACCGCTTGTCGAAGACAACAATATTCGCGGTAATTCCTCGCTTGCCGATTACGCAAAGCTGCGCCCGGCGTTTGATCGCAAACACGGAACGGTAACGGCGGCAAACAGTACGCCGCTGACCGATGGCGCGGCAGCGGTGATCCTGATGACTGAATCCCGGGCGAAAGAATTAGGGCTGGTGCCGCTGGGGTATCTGCGCAGCTACGCATTTACTGCGATTGATGTCTGGCAGGACATGTTGCTCGGTCCAGCCTGGTCAACACCGCTGGCGCTGGAGCGTGCCGGTTTGACGATGAGCGATCTGACATTGATCGATATGCACGAAGCCTTTGCAGCTCAGACGCTGGCGAATATTCAGTTGCTGGGTAGTGAACGTTTTGCTCGTGAAGCACTGGGGCGTGCACATGCCACTGGCGAAGTGGACGATAGCAAATTTAACGTGCTTGGCGGTTCGATTGCTTACGGGCATCCCTTCGCGGCGACCGGCGCGCGGATGATTACCCAGACATTGCATGAACTTCGCCGTCGCGGCGGTGGATTTGGTTTAGTTACCGCCTGTGCTGCCGGTGGGCTTGGCGCGGCAATGGTTCTGGAGGCGGAATAA", + "dna_sequence_length": 1311, + "functions": [ + "beta-ketoacyl-CoA thiolase, anaerobic, subunit" + ], + "id": "CDS_2326", + "location": [ + [ + "NC_000913", + 2460469, + "-", + 1311 + ] + ], + "md5": "90cafdfb41a63e8fcf81201432ae7b0a", + "parent_gene": "", + "protein_md5": "4c91de5c91649883675fd57c3e8177f0", + "protein_translation": "MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE", + "protein_translation_length": 436, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007731" + ], + [ + "gene_synonym", + "ECK2337" + ], + [ + "gene_synonym", + "EcoGene:EG14129" + ], + [ + "gene_synonym", + "GI:90111421" + ], + [ + "gene_synonym", + "GeneID:948817" + ], + [ + "gene_synonym", + "JW2340" + ], + [ + "gene_synonym", + "NP_416845.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD33" + ], + [ + "gene_synonym", + "b2343" + ], + [ + "gene_synonym", + "yfcZ" + ] + ], + "dna_sequence": "ATGAGTAAATGTAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCACCATTATGGACAACTCCGACTGCACCGCGTCTTACAGCCGCGTGTTTGCAAACCGCGCAGAAGCAGAGCAAACGCTGGCGGCGCTGACTGAAAAAGCCCGTAGCGTGGAATCTGAACCTTGCAAAATCACCCCGACTTTCACTGAAGAGTCTGACGGTGTGCGCCTGGATATCGATTTCACTTTTGCCTGCGAAGCTGAAATGCTGATTTTCCAGCTGGGTCTGCGTTAA", + "dna_sequence_length": 285, + "functions": [ + "UPF0381 family protein" + ], + "id": "CDS_2327", + "location": [ + [ + "NC_000913", + 2460934, + "-", + 285 + ] + ], + "md5": "17fe970ca8af4702ba1b0d606977df56", + "parent_gene": "", + "protein_md5": "1de40c116bd26f06f23127c4d2cb796e", + "protein_translation": "MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007740" + ], + [ + "gene_synonym", + "ECK2338" + ], + [ + "gene_synonym", + "EcoGene:EG10280" + ], + [ + "gene_synonym", + "GI:145698292" + ], + [ + "gene_synonym", + "GeneID:946820" + ], + [ + "gene_synonym", + "JW2341" + ], + [ + "gene_synonym", + "NP_416846.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10384" + ], + [ + "gene_synonym", + "b2344" + ], + [ + "gene_synonym", + "fadL" + ], + [ + "gene_synonym", + "ttr" + ] + ], + "dna_sequence": "ATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACGTCTCCATCTGGTCGTAGCCTGAAAGCCGATAACATCGCGCCTACGGCATGGGTTCCGAACATGCACTTTGTTGCACCGATTAACGACCAATTTGGTTGGGGCGCTTCTATTACCTCTAACTATGGTCTGGCTACAGAGTTTAACGATACTTATGCAGGCGGCTCTGTCGGGGGTACAACCGACCTTGAAACCATGAACCTGAACTTAAGCGGTGCGTATCGCTTAAATAATGCATGGAGCTTTGGTCTTGGTTTCAACGCCGTCTACGCTCGCGCGAAAATTGAACGTTTCGCAGGCGATCTGGGGCAGTTGGTTGCTGGCCAAATTATGCAATCTCCTGCTGGCCAAACTCAGCAAGGGCAAGCATTGGCAGCTACCGCCAACGGTATTGACAGTAATACCAAAATCGCTCATCTGAACGGTAACCAGTGGGGCTTTGGCTGGAACGCCGGAATCCTGTATGAACTGGATAAAAATAACCGCTATGCACTGACCTACCGTTCTGAAGTGAAAATTGACTTCAAAGGTAACTACAGCAGCGATCTTAATCGTGCGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGA", + "dna_sequence_length": 1341, + "functions": [ + "long-chain fatty acid outer membrane transporter" + ], + "id": "CDS_2328", + "location": [ + [ + "NC_000913", + 2461306, + "+", + 1341 + ] + ], + "md5": "a07e7c016ed3beb93d87c424fae51390", + "parent_gene": "", + "protein_md5": "8dfaec223bf7e999958f9ce5367485e1", + "protein_translation": "MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007743" + ], + [ + "gene_synonym", + "ECK2339" + ], + [ + "gene_synonym", + "EcoGene:EG14130" + ], + [ + "gene_synonym", + "GI:16130278" + ], + [ + "gene_synonym", + "GeneID:946819" + ], + [ + "gene_synonym", + "JW2342" + ], + [ + "gene_synonym", + "NP_416847.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76505" + ], + [ + "gene_synonym", + "b2345" + ], + [ + "gene_synonym", + "yfdF" + ] + ], + "dna_sequence": "ATGCTACCATCTATTTCAATCAACAATACCAGCGCAGCTTACCCAGAATCCATCAATGAAAATAACAATGATGAAGTTAATGGATTAGTACAAGAGTTCAAAAACCTTTTTAATGGTAAGGAAGGAATAAGCACCTGTATTAAACATCTACTTGAGCTTATAAAAAACGCCATACGAGTAAACGACGATCCTTATAGATTTAATATTAATAATTCCTCAGTTACTTATATTGATATTGACTCCAATGATACAGACCATATTACTATTGGTATCGACAACCAAGAACCAATAGAATTACCTGCGAACTATAAAGACAAAGAACTCGTCCGTACTATCATTAATGACAACATAGTTGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGTACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGTGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAAACGAGCTCAACGGGGAAAGACTGAGAGAACCAAACGACGTTTTTAAACGTTATGGTCGAGCAATAAGATATGATTTTCAAGTGGACGATGCAAAATATAAATGCGACCATCTAAAAGAAATAGTTTCTACTTTAGTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAA", + "dna_sequence_length": 1059, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2329", + "location": [ + [ + "NC_000913", + 2463012, + "+", + 1059 + ] + ], + "md5": "c1d91a65ec0da4351a2af5d438803a34", + "parent_gene": "", + "protein_md5": "afe8423dafa8f313febc28fc3e17296e", + "protein_translation": "MLPSISINNTSAAYPESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIDSNDTDHITIGIDNQEPIELPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEFDESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQYCSENARSASAWFESSKAIMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDLEGKIEERLQNRQAEYQNEINQPSAPGVNFDDI", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007745" + ], + [ + "gene_synonym", + "ECK2340" + ], + [ + "gene_synonym", + "EcoGene:EG14276" + ], + [ + "gene_synonym", + "GI:16130279" + ], + [ + "gene_synonym", + "GeneID:945582" + ], + [ + "gene_synonym", + "JW2343" + ], + [ + "gene_synonym", + "NP_416848.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76506" + ], + [ + "gene_synonym", + "b2346" + ], + [ + "gene_synonym", + "mlaA" + ], + [ + "gene_synonym", + "vacJ" + ] + ], + "dna_sequence": "ATGAAGCTTCGCCTGTCGGCGCTTGCTCTGGGAACTACGCTTCTGGTGGGGTGTGCGAGTTCCGGTACAGATCAGCAAGGGCGTTCTGACCCGTTAGAAGGGTTCAACCGCACCATGTACAACTTCAACTTCAATGTATTAGACCCGTATATTGTTCGACCGGTCGCTGTCGCCTGGCGTGATTATGTTCCGCAACCGGCGCGTAACGGTTTGAGCAACTTTACTGGCAACCTTGAAGAACCTGCGGTGATGGTTAACTACTTCTTGCAGGGCGACCCTTATCAGGGGATGGTCCACTTTACCCGCTTTTTCCTGAACACCATTTTGGGGATGGGCGGTTTTATTGATGTTGCAGGGATGGCGAACCCGAAACTGCAACGGACTGAACCTCACCGCTTCGGTAGTACGCTTGGTCATTATGGCGTGGGTTATGGGCCTTACGTTCAGTTACCGTTCTACGGTAGCTTCACGCTGCGTGATGACGGTGGTGATATGGCGGATGGTTTTTACCCGGTTCTTTCCTGGCTGACCTGGCCGATGTCTGTGGGTAAATGGACGCTTGAAGGGATCGAAACCCGCGCTCAGCTGCTGGATTCCGATGGTCTGCTGCGTCAGTCGTCCGATCCTTATATTATGGTGCGCGAAGCGTACTTCCAGCGTCATGATTTCATCGCTAATGGCGGCGAACTCAAACCGCAGGAAAATCCGAACGCACAAGCGATTCAGGATGATTTAAAAGATATTGATTCTGAATAA", + "dna_sequence_length": 756, + "functions": [ + "ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component" + ], + "id": "CDS_2330", + "location": [ + [ + "NC_000913", + 2465007, + "-", + 756 + ] + ], + "md5": "a0e7164d9dda45dec1575941423427c7", + "parent_gene": "", + "protein_md5": "84624b22fe8f5d1e5c6d725ee624b3fc", + "protein_translation": "MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGFYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQAIQDDLKDIDSE", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007751" + ], + [ + "gene_synonym", + "ECK2341" + ], + [ + "gene_synonym", + "EcoGene:EG12420" + ], + [ + "gene_synonym", + "GI:16130280" + ], + [ + "gene_synonym", + "GeneID:944801" + ], + [ + "gene_synonym", + "JW2344" + ], + [ + "gene_synonym", + "NP_416849.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37327" + ], + [ + "gene_synonym", + "b2347" + ], + [ + "gene_synonym", + "yfdC" + ] + ], + "dna_sequence": "ATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTGGAAGGTGTGCCGGGCAGCTTCTTGCTGGAGAATCTCGGTTATACCTTTGGTTTTATTATCGTCATTATGGCCCGCCAGCAATTATTTACCGAAAATACCGTGACTGCGGTACTACCCGTCATGCAAAAACCGACAATGAGCAACGTCGGCTTACTTATACGGTTATGGGGCGTCGTGCTGCTGGGTAATATTCTCGGGACAGGTATTGCGGCGTGGGCATTTGAATATATGCCTATCTTCAATGAAGAAACTCGCGATGCATTTGTCAAAATCGGCATGGATGTGATGAAGAACACCCCCAGCGAGATGTTTGCCAACGCGATCATTTCCGGCTGGCTGATCGCCACTATGGTTTGGATGTTTCCTGCAGCGGGTGCGGCAAAGATTGTGGTGATTATATTGATGACCTGGCTTATTGCCCTGGGTGACACCACCCATATCGTGGTCGGTTCTGTTGAAATCCTCTATCTGGTGTTTAACGGTACGCTGCACTGGAGCGATTTCATCTGGCCCTTCGCACTACCTACTTTAGCGGGGAACATCTGCGGCGGCACCTTTATCTTCGCGTTAATGAGTCATGCACAGATTCGTAACGACATGAGCAATAAGCGTAAAGCAGAAGCACGCCAAAAAGCAGAACGTGCGGAAAACATTAAGAAAAATTATAAAAACCCGGCATAA", + "dna_sequence_length": 933, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_2331", + "location": [ + [ + "NC_000913", + 2465301, + "+", + 933 + ] + ], + "md5": "1a094054759c738afab5035111388c08", + "parent_gene": "", + "protein_md5": "32abce4901f1e587388d671478608386", + "protein_translation": "MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007756" + ], + [ + "gene_synonym", + "ECK2343" + ], + [ + "gene_synonym", + "EcoGene:EG12413" + ], + [ + "gene_synonym", + "GI:16130281" + ], + [ + "gene_synonym", + "GeneID:946821" + ], + [ + "gene_synonym", + "JW2345" + ], + [ + "gene_synonym", + "NP_416850.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37326" + ], + [ + "gene_synonym", + "b2349" + ], + [ + "gene_synonym", + "intC" + ], + [ + "gene_synonym", + "intS" + ], + [ + "gene_synonym", + "yfdB" + ] + ], + "dna_sequence": "ATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTTCTCGATGGTAATGGCCTGTACCTTTATGTCCCTGTGTCAGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAAAATATCCGCTTATGACTTTGCAGGAGGCAAGGGATAAAGCATGGACTGCGAGGAAAGACATCTCGGTTGGCATCGATCCTGTAAAGGCGAAAAAGGCTTCGTCTAACAACAATTCCTTTAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGTATGGTCAGTAGGGTATGCAACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTCAACAAAGCACTGGCAACATTTTCAGGAAGTATCGTATCGCTCATTGCGACCAAAGTTTTACGCTACACAGCCCTAAGAACGAAAGAGCTTCGTTCCATGCTATGGAAGAACGTCGATTTTGAAAATAGGATTATCACCATCGACGCCAGTGTGATGAAAGGACGCAAAATTCATGTGGTTCCTATGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGA", + "dna_sequence_length": 1158, + "functions": [ + "CPS-53 (KpLE1) prophage", + "putative prophage CPS-53 integrase" + ], + "id": "CDS_2332", + "location": [ + [ + "NC_000913", + 2466545, + "+", + 1158 + ] + ], + "md5": "5910d974a1649a7ac0ed8477c15a6932", + "parent_gene": "", + "protein_md5": "1ecaf8fda79cd5aa3da5038e40cf4a25", + "protein_translation": "MLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASSNNNSFSAIYKEWYEHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007761" + ], + [ + "gene_synonym", + "ECK2344" + ], + [ + "gene_synonym", + "EcoGene:EG14131" + ], + [ + "gene_synonym", + "GI:16130282" + ], + [ + "gene_synonym", + "GeneID:948821" + ], + [ + "gene_synonym", + "JW2346" + ], + [ + "gene_synonym", + "NP_416851.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77682" + ], + [ + "gene_synonym", + "b2350" + ], + [ + "gene_synonym", + "gtrA" + ], + [ + "gene_synonym", + "yfdG" + ] + ], + "dna_sequence": "ATGTTAAAGCTATTTGCAAAGTACACCTCTATTGGTGTGCTGAACACCCTTATACACTGGGTGGTTTTTGGTGTTTGTATCTATGTCGCGCATACAAACCAAGCTCTTGCAAACTTCGCAGGTTTCGTTGTGGCTGTGAGCTTTAGCTTCTTCGCGAATGCAAAATTCACATTCAAGGCATCGACTACAACGATGCGCTACATGCTATATGTTGGGTTCATGGGGACACTGAGTGCTACTGTTGGATGGGCTGCTGATAGATGCGCACTTCCCCCGATGATAACTCTTGTCACCTTCTCCGCCATCAGCCTGGTGTGCGGTTTCGTCTATTCAAAGTTCATTGTCTTTAGGGATGCGAAATGA", + "dna_sequence_length": 363, + "functions": [ + "CPS-53 (KpLE1) prophage", + "bactoprenol-linked glucose translocase/flippase" + ], + "id": "CDS_2333", + "location": [ + [ + "NC_000913", + 2467855, + "+", + 363 + ] + ], + "md5": "77a20db55f393f8d8c1e901dd8522d76", + "parent_gene": "", + "protein_md5": "028d8e1ba9ca674984b356043d6fd9a8", + "protein_translation": "MLKLFAKYTSIGVLNTLIHWVVFGVCIYVAHTNQALANFAGFVVAVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWAADRCALPPMITLVTFSAISLVCGFVYSKFIVFRDAK", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007763" + ], + [ + "gene_synonym", + "ECK2345" + ], + [ + "gene_synonym", + "EcoGene:EG14132" + ], + [ + "gene_synonym", + "GI:16130283" + ], + [ + "gene_synonym", + "GeneID:949098" + ], + [ + "gene_synonym", + "JW2347" + ], + [ + "gene_synonym", + "NP_416852.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77293" + ], + [ + "gene_synonym", + "b2351" + ], + [ + "gene_synonym", + "gtrB" + ], + [ + "gene_synonym", + "yfdH" + ] + ], + "dna_sequence": "ATGAAGATATCTCTTGTAGTTCCTGTCTTCAATGAAGAAGAAGCGATACCAATTTTTTATAAAACGGTACGTGAATTCGAAGAATTGAAGTCATATGAAGTGGAAATCGTTTTCATAAATGACGGCAGCAAAGACGCTACGGAGTCAATCATTAATGCTCTGGCTGTTTCAGATCCTCTAGTTGTTCCGCTGTCATTTACACGCAACTTTGGTAAAGAACCAGCATTGTTTGCAGGGTTAGACCATGCAACCGGGGATGCGATAATCCCAATTGATGTTGACCTGCAAGACCCGATTGAGGTTATTCCTCATCTTATTGAAAAATGGCAAGCAGGTGCTGATATGGTTCTTGCTAAAAGATCTGACCGCTCAACTGATGGACGCCTGAAGCGAAAAACGGCTGAGTGGTTCTATAAGCTCCACAATAAAATAAGCAATCCTAAAATTGAAGAGAATGTTGGTGATTTCAGGCTGATGAGCCGTGATGTTGTCGAAAATATTAAACTTATGCCAGAACGAAACCTTTTCATGAAAGGTATTCTGAGCTGGGTAGGAGGAAAGACAGATATTGTTGAATACGTGCGAGCGGAAAGAATTGCTGGAGATACAAAATTTAATGGATGGAAACTTTGGAATTTAGCACTTGAGGGTATTACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGA", + "dna_sequence_length": 921, + "functions": [ + "CPS-53 (KpLE1) prophage", + "bactoprenol glucosyl transferase" + ], + "id": "CDS_2334", + "location": [ + [ + "NC_000913", + 2468214, + "+", + 921 + ] + ], + "md5": "839fcad2e933c87d2e648b0e547b8d16", + "parent_gene": "", + "protein_md5": "1134ac1cc16539c0d6579954e5210902", + "protein_translation": "MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYIIKRVKK", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007765" + ], + [ + "gene_synonym", + "ECK2346" + ], + [ + "gene_synonym", + "EcoGene:EG14133" + ], + [ + "gene_synonym", + "GI:16130284" + ], + [ + "gene_synonym", + "GeneID:946822" + ], + [ + "gene_synonym", + "JW5382" + ], + [ + "gene_synonym", + "NP_416853.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76507" + ], + [ + "gene_synonym", + "b2352" + ], + [ + "gene_synonym", + "gtrIV" + ], + [ + "gene_synonym", + "gtrS" + ], + [ + "gene_synonym", + "yfdI" + ] + ], + "dna_sequence": "ATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTACCTTTATTGTATAAATTGAAAGGTCATATTGATTCAATTGATAGCTATGAGTATATAAGTTCATATAGTTATATTTTGTATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCATCTTTATTTGTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAA", + "dna_sequence_length": 1332, + "functions": [ + "serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage" + ], + "id": "CDS_2335", + "location": [ + [ + "NC_000913", + 2469131, + "+", + 1332 + ] + ], + "md5": "665789d363a7dffdd28482b5002508fa", + "parent_gene": "", + "protein_md5": "37a51ee05d4aba5a05d7d84e1dd2ff12", + "protein_translation": "MNKAIKVSLYISFVLIICALSKNIMMLNTSDFGRAIKPLIEDIPAFTYDLPLLYKLKGHIDSIDSYEYISSYSYILYTYVLFISIFTEYLDARVLSLFLKVIYIYSLYAIFTSYIKTERYVTLFTFFILAFLMCSSSTLSMFASFYQEQIVIIFLPFLVYSLTCKNNKSMLLLFFSLLIISTAKNQFILTPLIVYSYYIFFDRHKLIIKSVICVVCLLASIFAISYSKGVVELNKYHATYFGSYLYMKNNGYKMPSYVDDKCVGLDAWGNKFDISFGATPTEVGTECFESHKDETFSNALFLLVSKPSTIFKLPFDDGVMSQYKENYFHVYKKLHVIYGESNILTTITNIKDNIFKNIRFISLLLFFIASIFIRNNKIKASLFVVSLFGISQFYVSFFGEGYRDLSKHLFGMYFSFDLCLYITVVFLIYKIIQRNQDNSDVKH", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007768" + ], + [ + "gene_synonym", + "ECK2347" + ], + [ + "gene_synonym", + "EcoGene:EG14134" + ], + [ + "gene_synonym", + "GeneID:946825" + ], + [ + "gene_synonym", + "JW5383" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77326" + ], + [ + "gene_synonym", + "b2353" + ], + [ + "gene_synonym", + "tfaS" + ], + [ + "gene_synonym", + "yfdJ" + ] + ], + "dna_sequence": "ACTATCGCCCCATTAACGCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCGGAGGAGTAG", + "dna_sequence_length": 291, + "id": "CDS_2336", + "location": [ + [ + "NC_000913", + 2470815, + "+", + 291 + ] + ], + "md5": "7372f2e6a6eb1059fc799919a493fa43", + "parent_gene": "", + "protein_md5": "2ad59d5977da20f8d929719311434859", + "protein_translation": "TIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELPEE", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007770" + ], + [ + "gene_synonym", + "ECK2348" + ], + [ + "gene_synonym", + "EcoGene:EG14135" + ], + [ + "gene_synonym", + "GI:16130286" + ], + [ + "gene_synonym", + "GeneID:948822" + ], + [ + "gene_synonym", + "JW2350" + ], + [ + "gene_synonym", + "NP_416855.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77656" + ], + [ + "gene_synonym", + "b2354" + ], + [ + "gene_synonym", + "yfdK" + ] + ], + "dna_sequence": "ATGAATTACATATATTCCGCGACTACAAACTCTTTCTATCCCTTGGAGATGAAAGAGGATTACACGCAAGCTGGCTCATGGCCAGATGATGCTGTTGAAGTTGATGAGCAAGTGTATATTGAGTTTTCCGGATTACCGCCGAAAGGAAAAATCCGTATCGCTGGAGAAAATGGTTTTCCTGCATGGTCTGAAATTCCACCACCAACACATGAGGAACAGATTGCTGCAGCCGAACTGAAAAAGCAGCAATTGATTAATCAGGCCAACGATTATATGAACAGTAAACAATGGGCTGGTAAAGCGGCTATTGGTCGTCTGAAAGGTGAGGAACTGGCGCAATATAATTTGTGGCTGGATTATCTGGACGCACTGGAGCTGGTCGATACTTCCAGTGCGCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGA", + "dna_sequence_length": 441, + "functions": [ + "CPS-53 (KpLE1) prophage", + "conserved protein" + ], + "id": "CDS_2337", + "location": [ + [ + "NC_000913", + 2471517, + "-", + 441 + ] + ], + "md5": "00eb0bc7b41a96cc9b64007a4817f0a4", + "parent_gene": "", + "protein_md5": "1301bd4e095d04cd5ba9e554ee5cd96a", + "protein_translation": "MNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007773" + ], + [ + "gene_synonym", + "ECK2349" + ], + [ + "gene_synonym", + "EcoGene:EG14136" + ], + [ + "gene_synonym", + "GeneID:949099" + ], + [ + "gene_synonym", + "JW5384" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76508" + ], + [ + "gene_synonym", + "b2355" + ], + [ + "gene_synonym", + "yfdL" + ] + ], + "dna_sequence": "ACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAGCTTTGCAGCGTTGTGGAGGCCTCCGGTGCCAGCCTGGAGAAGGGGCGGCATGACCAGCTGCTTACCGCGCTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATTGGACGGCACGGTGCAAAAGGCTCTCGAAAACCTTGGTTTGGGAGAAGCGGCTAAAAGAAATGTAGGGACAGGGGCGAATCAGATACCTGATATGGGTAGTTTTATGCTTTCTGCTTCAGTTCCTGGATATCAAAAATTGCCATCCGGTTTAATTATTCAATGGGGGCCAATTGATGTTCCGCTGACGTCTCAGGACACAGTAACCTATTTTCCGATTGCATTTCCGAATAGATGTCTGCGGGTATTTGCGACTCAGGATTACACTCCCGGCAGTGCAAATGTTGGCTATATAGCTTGTGCCGGTTATAACCAGGACCCGGTGAAATTTATTTCCAGAGCAGGCGTACCCGGTATCGGTGCTTCATTTTTCGCATTAGGGTGTTAA", + "dna_sequence_length": 579, + "id": "CDS_2338", + "location": [ + [ + "NC_000913", + 2472122, + "-", + 579 + ] + ], + "md5": "d866f8cefd1eb1e13703c51c0bbd47ad", + "parent_gene": "", + "protein_md5": "0e1babf6f2a36c35fc0c4cc94943480d", + "protein_translation": "TRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007775" + ], + [ + "gene_synonym", + "ECK2350" + ], + [ + "gene_synonym", + "EcoGene:EG12950" + ], + [ + "gene_synonym", + "GeneID:945416" + ], + [ + "gene_synonym", + "JW2352" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76509" + ], + [ + "gene_synonym", + "b2356" + ], + [ + "gene_synonym", + "yfdM" + ], + [ + "gene_synonym", + "yzyB" + ] + ], + "dna_sequence": "ATGAGTAATAAATATTGCCAGGCGCTGGTGGAGCTGCGGAACAAACCAGCCCATGAACTGAAGGAAGTGGGCGATCAGTGGCGCACGCCGGACAACATTTTCTGGGGAATTAACACCCTGTTTGGCCCGTTTGTTCTGGATCTGTTTACTGATGGTGATAACGCCAAATGTGCCGCGTATTACACTGCGGAAGACAACGCGCTGGCGCATGACTGGTCAGAACGTCTTGCGGAGCTTAAAGGTGCTGCCTTTGGTAATCCCCCGTACCCG", + "dna_sequence_length": 270, + "id": "CDS_2339", + "location": [ + [ + "NC_000913", + 2472387, + "-", + 270 + ] + ], + "md5": "02f38c1e11efd6cfbd597793be917f15", + "parent_gene": "", + "protein_md5": "0c2aedd6ad68c7b872e11cd6df9ed13e", + "protein_translation": "MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYP", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007777" + ], + [ + "gene_synonym", + "ECK2351" + ], + [ + "gene_synonym", + "EcoGene:EG12949" + ], + [ + "gene_synonym", + "GI:16130289" + ], + [ + "gene_synonym", + "GeneID:946419" + ], + [ + "gene_synonym", + "JW5385" + ], + [ + "gene_synonym", + "NP_416858.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76510" + ], + [ + "gene_synonym", + "b2357" + ], + [ + "gene_synonym", + "yfdN" + ], + [ + "gene_synonym", + "yzyA" + ] + ], + "dna_sequence": "GTGAGCATGAGTCTTTTGAATGACGTTCAGAAATTCATTGAAGCCCATCCGGGCTGTACTTCCGGAGACATTGCGGATGCTTTTGCAGGTTACTCACGGCAGCGCGTTCTGCAGTCAGCAAGCAAGTTACGTCAGAGTGGGCGTGTGGCTCACCGTTGTGAAGGAGATACACACAGACATTTCCCGCGCCTGACTGAGAGAGCGCAGGATCCGGAACCACAACCAGTTCGTGAAACCAGACCTGTGCGCAATTTCTATGTCGGCACTAACGACCCGCGGGTGATTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTGCAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTCTGGCGCGTCGTGAACGGTGTTTACGGAAAAGCAGTAAGCGGGCTGCATCAGGTGAAGAGTGGTATCTCTCAGGGAATTACGTGGGGGCTTAA", + "dna_sequence_length": 495, + "functions": [ + "CPS-53 (KpLE1) prophage", + "uncharacterized protein" + ], + "id": "CDS_2340", + "location": [ + [ + "NC_000913", + 2472881, + "-", + 495 + ] + ], + "md5": "e99319d0ca95562d1c6c9a4968d3d6e3", + "parent_gene": "", + "protein_md5": "19378ad73f9628d008db9f20fd6fe44a", + "protein_translation": "MSMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007779" + ], + [ + "gene_synonym", + "ECK2352" + ], + [ + "gene_synonym", + "EcoGene:EG14137" + ], + [ + "gene_synonym", + "GeneID:947403" + ], + [ + "gene_synonym", + "JW2355" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD35" + ], + [ + "gene_synonym", + "b2358" + ], + [ + "gene_synonym", + "oweS" + ], + [ + "gene_synonym", + "yfdO" + ] + ], + "dna_sequence": "AACCGCAATGCGTCGAATGTTTATCAGCTTAACGTTGCGAAGCTTCAGGCAGCGGCATTTTCTCAACTGTCAGACTCTGACCCGTCAAAATCTGACGCATCAAAATCTGACCCGTCAAAATTTGATGCGTCGAAATCTGGCAAAAAATCGGGTTTTCACCCGTCAGAATCTGGCGGGGATCCGTCAGTAAAATCAAAACATGATCCGTCAGATAAAAAACCTTCTCGTCCGGACGCTTCGCAACCGGACACGCAGACGGATGAACAGGATTTTTTAACTCGCCATCCTGATGCGGTTGTATTCAGCCCTAAAAAGCGCCAGTGGGGAACGCAGGATGATTTGACCTGCGCACAGTGGCTCTGGAAAAAAATCATCGCCCTGTACGAGCAGGCCGCCGAATGTGACGGCGAGGTGGTTCGTCCCAAAGAACCGAACTGGACAGCCTGGGCAAACGAAATTCGCCTGATGTGTGTGCAGGATGGTCGTACTCACAAACAAATCTGCGAGATGTACAGCCGCGTCAGCCGCGATCCGTTCTGGTGCCGTAACGTGCTCAGCCCGTCGAAGCTGCGGGAAAAATGGGATGAGCTTTCCCTGCGCTTATCGCCGTCCGTCAGCACGTACACAGAAAAACGCGAAGACCCGTACTTCAAAGCCAGTTACGACAATGTGGACTACAGCCAGATCCCGGCAGGATTCAGGGGGTGA", + "dna_sequence_length": 708, + "id": "CDS_2341", + "location": [ + [ + "NC_000913", + 2473585, + "-", + 708 + ] + ], + "md5": "b467620d46db71638889e6c911114737", + "parent_gene": "", + "protein_md5": "33083c6d139a183102f1b0f1857bccc5", + "protein_translation": "NRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFDASKSGKKSGFHPSESGGDPSVKSKHDPSDKKPSRPDASQPDTQTDEQDFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007785" + ], + [ + "gene_synonym", + "ECK2353" + ], + [ + "gene_synonym", + "EcoGene:EG14138" + ], + [ + "gene_synonym", + "GI:145698293" + ], + [ + "gene_synonym", + "GeneID:945565" + ], + [ + "gene_synonym", + "JW2356" + ], + [ + "gene_synonym", + "NP_416860.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76512" + ], + [ + "gene_synonym", + "b2359" + ], + [ + "gene_synonym", + "yfdP" + ] + ], + "dna_sequence": "ATGGCTAGCGAACGCAGTACTGATGTGCAGGCATTTATCGGGGAGCTGGACGGCGGCGTATTTGAAACCAAAATCGGCGCAGTTCTCAGTGAAGTCGCTTCCGGTGTGATGAACACGAAAACCAAAGGTAAGGTCTCACTCAACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTTGCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAA", + "dna_sequence_length": 363, + "functions": [ + "CPS-53 (KpLE1) prophage", + "uncharacterized protein" + ], + "id": "CDS_2342", + "location": [ + [ + "NC_000913", + 2473604, + "+", + 363 + ] + ], + "md5": "27b8ff85358510ad4d551d5928d98dbb", + "parent_gene": "", + "protein_md5": "04132d0772c658e8f8e2d17d9a91afd5", + "protein_translation": "MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007788" + ], + [ + "gene_synonym", + "ECK2354" + ], + [ + "gene_synonym", + "EcoGene:EG14139" + ], + [ + "gene_synonym", + "GI:16130292" + ], + [ + "gene_synonym", + "GeneID:946827" + ], + [ + "gene_synonym", + "JW2357" + ], + [ + "gene_synonym", + "NP_416861.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76513" + ], + [ + "gene_synonym", + "b2360" + ], + [ + "gene_synonym", + "yfdQ" + ] + ], + "dna_sequence": "ATGTCTCAGAACTTAGACGCAACCGCAATTAATCAAATCCATGCCCTTATTTCTGCTCAGGGTGTTAATGAAATTATCAGTAAGATTGGTGCCGATGCTGTGGCATTGCCTGAGAATTTCCGCATTCATGATCTGGAAAAATTTAATTTAAATCGCTTCCGTTTCCGTGGTGCGCTTTCCACTGCCAGCATCGATGACTTTACCCGTTATTCTAAAGATCTTGCAGATGAAGGCACCCGCTGCTTTATCGATGCTGATAATATGCGTGCCGTCAGTGTGCTTAACCTGGGTACTATTGATGAACCAGGTCACGCAGATAACACCGCCACTCTCAAACTGAAAAAGACAGCACCGTTCTCTGCCCTGTTGTCTGTTAACGGCGAGCGTAACTCCCAGAAATCACTGGCAGAATGGATTGAAGACTGGGCCGACTACCTTGTGGGCTTTGATGCTAATGGTGACGCCATTCAGGCAACAAAAGCGGCTGCGGCAATCCGTAAAATCACGATTGAAGCAAACCAGACCGCTGATTTTGAAGATAATGACTTCAGCGGCAAACGCTCCCTGATGGAATCTGTCGAAGCGAAGACCAAAGACATTATGCCAGTGGCATTTGAATTTAAATGCGTTCCGTTTGAAGGTCTGAAAGAACGTCCGTTTAAATTACGCCTCAGCATTATCACTGGCGATCGTCCTGTACTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGA", + "dna_sequence_length": 825, + "functions": [ + "CPS-53 (KpLE1) prophage", + "uncharacterized protein" + ], + "id": "CDS_2343", + "location": [ + [ + "NC_000913", + 2474032, + "+", + 825 + ] + ], + "md5": "52b58e5a5896641d77e13ba3df28bd31", + "parent_gene": "", + "protein_md5": "a41eca9b6dcfefaa8d919d9e4b724d92", + "protein_translation": "MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007791" + ], + [ + "gene_synonym", + "ECK2355" + ], + [ + "gene_synonym", + "EcoGene:EG14140" + ], + [ + "gene_synonym", + "GI:90111424" + ], + [ + "gene_synonym", + "GeneID:946834" + ], + [ + "gene_synonym", + "JW2358" + ], + [ + "gene_synonym", + "NP_416862.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76514" + ], + [ + "gene_synonym", + "b2361" + ], + [ + "gene_synonym", + "yfdR" + ] + ], + "dna_sequence": "ATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGTCATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCATGATGCAACAGAAGCGTATTGCCAGGACATCCCCGCACCACTGAAACGCCTTCTTCCTGACTATAAACGGATGGAAGAAAAAATAGATGCAGTAATCCGTGAGAAATACGGGTTACCTCCTGTTATGAGCACGCCAGTGAAATATGCCGATCTCATTATGCTGGCAACCGAACGCCGTGATCTCGGGCTTGATGATGGCTCTTTCTGGCCTGTACTGGAAGGCATCCCGGCAACAGAGATGTTCAACGTGATTCCACTGGCACCGGGTCATGCCTACGGGATGTTTATGGAACGTTTTAACGATTTATCGGAGTTACGCAAATGCGCATGA", + "dna_sequence_length": 537, + "functions": [ + "CPS-53 (KpLE1) prophage", + "conserved protein" + ], + "id": "CDS_2344", + "location": [ + [ + "NC_000913", + 2474984, + "+", + 537 + ] + ], + "md5": "b1b30bd71a6f94f7f1f77b8e5ea9cfd7", + "parent_gene": "", + "protein_md5": "124b3f099262412cd0d662136fff7562", + "protein_translation": "MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007793" + ], + [ + "gene_synonym", + "ECK2356" + ], + [ + "gene_synonym", + "EcoGene:EG14141" + ], + [ + "gene_synonym", + "GI:16130294" + ], + [ + "gene_synonym", + "GeneID:946426" + ], + [ + "gene_synonym", + "JW2359" + ], + [ + "gene_synonym", + "NP_416863.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76515" + ], + [ + "gene_synonym", + "b2362" + ], + [ + "gene_synonym", + "yfdS" + ] + ], + "dna_sequence": "ATGCGCATGAATGTTTTCGAAATGGAAGGGTTTCTTCGCGGGAAATGTGTACCGCGAGATCTGAAAGTGAACGAAACAAATGCTGAGTACCTGGTACGTAAATTCGACGCGCTTGAAGCTAAATGTGCGGCACTGGAAAACAAAATAATACCAGTGTCAGCTGAACTGCCACCAGCAAATGAAAGTGTTCTGTTATTTGATGCTAACGGAGAAGGCTGGCTGATTGGCTGGCGTTCTCTCTGGTACACCTGGGGACAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAA", + "dna_sequence_length": 363, + "functions": [ + "CPS-53 (KpLE1) prophage", + "uncharacterized protein" + ], + "id": "CDS_2345", + "location": [ + [ + "NC_000913", + 2475511, + "+", + 363 + ] + ], + "md5": "cdd754917eb5c3a405409e225104f698", + "parent_gene": "", + "protein_md5": "44b3a5e353bf833b858ab75613aba0a5", + "protein_translation": "MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007795" + ], + [ + "gene_synonym", + "ECK2357" + ], + [ + "gene_synonym", + "EcoGene:EG14142" + ], + [ + "gene_synonym", + "GI:16130295" + ], + [ + "gene_synonym", + "GeneID:946836" + ], + [ + "gene_synonym", + "JW5887" + ], + [ + "gene_synonym", + "NP_416864.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76516" + ], + [ + "gene_synonym", + "b2363" + ], + [ + "gene_synonym", + "yfdT" + ] + ], + "dna_sequence": "ATGACCACATTTACCAATAAAGAACTGATTAAAGAAATCAAAGAACGAATCAGCAGCCTAGAGGTTCGAGACGATATTGAGCGCCGTGCTTATGAAATCGCACTCGTATCTCTGGAAGTAGAGCCAGATGAACGCGAAGCCTATGAATTATTCATGGAAAAGCGTTTCGGTGACTTAGTAGATCGTCGGAGAGCAAAAAACGGCGATAACGAATACATGGCATGGGATATGACTCTCGGTTGGATCATCTGGCAGCAACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAA", + "dna_sequence_length": 306, + "functions": [ + "CPS-53 (KpLE1) prophage", + "uncharacterized protein" + ], + "id": "CDS_2346", + "location": [ + [ + "NC_000913", + 2475873, + "+", + 306 + ] + ], + "md5": "2fa2c2676dddf275b663f553a250a549", + "parent_gene": "", + "protein_md5": "e08b53909a14e6c835d3a0f69d78bc08", + "protein_translation": "MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285066" + ], + [ + "gene_synonym", + "ECK2358" + ], + [ + "gene_synonym", + "EcoGene:EG14428" + ], + [ + "gene_synonym", + "GeneID:1450283" + ], + [ + "gene_synonym", + "JW5386" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EET0" + ], + [ + "gene_synonym", + "b4545" + ], + [ + "gene_synonym", + "ypdJ" + ] + ], + "dna_sequence": "GAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCC", + "dna_sequence_length": 51, + "id": "CDS_2347", + "location": [ + [ + "NC_000913", + 2476181, + "+", + 51 + ] + ], + "md5": "58d04b91b0aa1f1385a4952ed5be061d", + "parent_gene": "", + "protein_md5": "153ef2e292b99b5727b65e18766161a4", + "protein_translation": "EPYSLTLDEACQFLKIS", + "protein_translation_length": 17, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0269710" + ], + [ + "gene_synonym", + "ECK2359" + ], + [ + "gene_synonym", + "EcoGene:EG14411" + ], + [ + "gene_synonym", + "GI:94541120" + ], + [ + "gene_synonym", + "GeneID:1450232" + ], + [ + "gene_synonym", + "JW5387" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EES9" + ], + [ + "gene_synonym", + "YP_588463.1" + ], + [ + "gene_synonym", + "b4501" + ], + [ + "gene_synonym", + "torI" + ] + ], + "dna_sequence": "ATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCAAAAGCCAAAGTTATCCACGGGCGAGCAAGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAA", + "dna_sequence_length": 201, + "functions": [ + "response regulator inhibitor for tor operon" + ], + "id": "CDS_2348", + "location": [ + [ + "NC_000913", + 2476310, + "+", + 201 + ] + ], + "md5": "16caedcafd137dd7876431c31aed9223", + "parent_gene": "", + "protein_md5": "2515a76b9b2164d8c7aa15c84dca96d5", + "protein_translation": "MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007797" + ], + [ + "gene_synonym", + "ECK2360" + ], + [ + "gene_synonym", + "EcoGene:EG13161" + ], + [ + "gene_synonym", + "GI:16130296" + ], + [ + "gene_synonym", + "GeneID:948828" + ], + [ + "gene_synonym", + "JW2361" + ], + [ + "gene_synonym", + "NP_416865.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46068" + ], + [ + "gene_synonym", + "b2364" + ], + [ + "gene_synonym", + "dsdC" + ] + ], + "dna_sequence": "ATGGAACCCCTTCGTGAAATAAGAAATCGGCTGCTTAACGGCTGGCAATTATCAAAAATGCATACTTTTGAAGTGGCTGCCAGGCATCAGTCCTTCGCCCTGGCGGCAGAGGAATTGTCGCTGAGCCCCAGTGCGGTAAGTCACCGTATCAATCAGCTGGAAGAAGAATTGGGCATTCAGTTGTTTGTTCGTTCCCATCGCAAAGTGGAATTAACGCACGAGGGGAAACGTGTTTATTGGGCGCTAAAATCGTCGCTGGATACCCTGAACCAGGAAATTCTTGATATCAAAAATCAGGAGTTATCGGGAACGTTAACTCTGTATTCCCGGCCCTCTATCGCCCAATGCTGGTTGGTGCCCGCATTAGGTGACTTTACACGCCGGTATCCGTCTATTTCGCTCACCGTGCTCACTGGTAATGACAACGTCAATCTGCAACGTGCCGGAATCGATTTGGCGATCTACTTTGATGATGCGCCGTCAGCGCAACTCACTCATCACTTTCTGATGGATGAAGAAATCCTGCCAGTATGTAGCCCGGAATACGCTCAAAGACATGCTTTAACCAACACGGTAATTAACCTGTGTCACTGTACGTTGCTCCATGACAGACAGGCATGGAGCAACGACTCCGGTACGGATGAATGGCATAGTTGGGCGCAACATTATGCGGTTAATTTGCCGACATCTTCTGGAATTGGCTTTGATCGTTCTGATTTAGCTGTTATTGCCGCGATGAATCATATTGGGGTGGCGATGGGAAGAAAACGCCTGGTACAAAAAAGGCTTGCCAGTGGTGAGCTCGTCGCGCCGTTTGGCGATATGACGGTGAAATGCCATCAGCATTATTACATCACCACATTACCGGGCAGGCAGTGGCCAAAAATTGAAGCGTTTATTATCTGGCTAAGAGAACAGGTAAAAACCACTTCATAA", + "dna_sequence_length": 936, + "functions": [ + "dsd operon activator", + "autorepressor" + ], + "id": "CDS_2349", + "location": [ + [ + "NC_000913", + 2477629, + "-", + 936 + ] + ], + "md5": "febf1ace450f95e39c4f6f11af3edcd6", + "parent_gene": "", + "protein_md5": "c38fa069b5c0c42353215cd2ad1e7c5d", + "protein_translation": "MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007801" + ], + [ + "gene_synonym", + "ECK2361" + ], + [ + "gene_synonym", + "EcoGene:EG10250" + ], + [ + "gene_synonym", + "GI:16130297" + ], + [ + "gene_synonym", + "GeneID:949103" + ], + [ + "gene_synonym", + "JW2362" + ], + [ + "gene_synonym", + "NP_416866.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08555" + ], + [ + "gene_synonym", + "b2365" + ], + [ + "gene_synonym", + "dsdC" + ], + [ + "gene_synonym", + "dsdX" + ], + [ + "gene_synonym", + "yfdA" + ], + [ + "gene_synonym", + "yfdD" + ] + ], + "dna_sequence": "ATGCACTCTCAAATCTGGGTTGTGAGCACGCTGCTTATCAGCATCGTGTTAATTGTACTGACCATCGTGAAGTTCAAATTCCACCCGTTTCTGGCGCTGTTGCTGGCCAGCTTCTTCGTGGGAACGATGATGGGCATGGGGCCACTGGATATGGTAAATGCTATTGAAAGTGGAATTGGCGGAACGCTGGGGTTCCTCGCAGCGGTTATCGGCCTTGGCACGATACTGGGAAAAATGATGGAAGTATCCGGGGCCGCAGAAAGAATTGGTCTGACACTTCAACGCTGCCGCTGGCTTTCAGTTGATGTCATTATGGTGCTGGTTGGCCTGATTTGTGGCATCACGCTGTTTGTTGAAGTGGGCGTCGTGCTATTGATTCCTCTGGCTTTTTCAATTGCCAAAAAAACCAATACCTCATTATTAAAGCTTGCCATTCCGCTATGTACCGCATTGATGGCAGTGCACTGCGTGGTTCCTCCACATCCGGCTGCTTTATATGTTGCCAATAAGCTGGGCGCAGATATCGGTTCGGTGATCGTCTACGGTTTGCTGGTTGGGCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGAAACATTTAAATACTATACGACAGCGACATTTATCGCTTCAGTCGTCGCTCTGGCGGGCACATTCCTGCTGTCATTTATCATCTAA", + "dna_sequence_length": 1338, + "functions": [ + "D-serine transporter" + ], + "id": "CDS_2350", + "location": [ + [ + "NC_000913", + 2477847, + "+", + 1338 + ] + ], + "md5": "8cbfb778fa11aada19cf3ea0a197b61d", + "parent_gene": "", + "protein_md5": "3b2370aab3a5230b8ef0eb39924478ff", + "protein_translation": "MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007804" + ], + [ + "gene_synonym", + "ECK2362" + ], + [ + "gene_synonym", + "EcoGene:EG10249" + ], + [ + "gene_synonym", + "GI:16130298" + ], + [ + "gene_synonym", + "GeneID:946837" + ], + [ + "gene_synonym", + "JW2363" + ], + [ + "gene_synonym", + "NP_416867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00926" + ], + [ + "gene_synonym", + "b2366" + ], + [ + "gene_synonym", + "dsdA" + ] + ], + "dna_sequence": "ATGGAAAACGCTAAAATGAACTCGCTCATCGCCCAGTATCCGTTGGTAAAGGATCTGGTTGCTCTTAAAGAAACCACCTGGTTTAATCCTGGCACGACCTCATTGGCTGAAGGTTTACCTTATGTTGGCCTGACCGAACAGGATGTTCAGGACGCCCATGCGCGCTTATCCCGTTTTGCACCCTATCTGGCAAAAGCATTTCCTGAAACTGCTGCCACTGGGGGGATTATTGAATCAGAACTGGTTGCCATTCCAGCTATGCAAAAACGGCTGGAAAAAGAATATCAGCAACCGATCAGCGGGCAACTGTTACTGAAAAAAGATAGCCATTTGCCCATTTCCGGCTCCATAAAAGCACGCGGCGGGATTTATGAAGTCCTGGCACACGCAGAAAAACTGGCTCTGGAAGCGGGGTTGCTGACGCTTGATGATGACTACAGCAAACTGCTTTCTCCGGAGTTTAAACAGTTCTTTAGCCAATACAGCATTGCTGTGGGCTCAACCGGAAATCTGGGGTTATCAATCGGCATTATGAGCGCCCGCATTGGCTTTAAGGTGACAGTTCATATGTCTGCTGATGCCCGGGCATGGAAAAAAGCGAAACTGCGCAGCCATGGCGTTACGGTCGTGGAATATGAGCAAGATTATGGTGTTGCCGTCGAGGAAGGACGTAAAGCAGCGCAGTCTGACCCGAACTGTTTCTTTATTGATGACGAAAATTCCCGCACGTTGTTCCTTGGGTATTCCGTCGCTGGCCAGCGTCTTAAAGCGCAATTTGCCCAGCAAGGCCGTATCGTCGATGCTGATAACCCTCTGTTTGTCTATCTGCCGTGTGGTGTTGGCGGTGGTCCTGGTGGCGTCGCATTCGGGCTTAAACTGGCGTTTGGCGATCATGTTCACTGCTTTTTTGCCGAACCAACGCACTCCCCTTGTATGTTGTTAGGCGTCCATACAGGATTACACGATCAGATTTCTGTTCAGGATATTGGTATCGACAACCTTACCGCAGCGGATGGCCTTGCAGTTGGTCGCGCATCAGGCTTTGTCGGGCGGGCAATGGAGCGTCTGCTGGATGGCTTCTATACCCTTAGCGATCAAACCATGTATGACATGCTTGGCTGGCTGGCGCAGGAAGAAGGTATTCGTCTTGAACCTTCGGCACTGGCGGGTATGGCCGGACCTCAGCGCGTGTGTGCATCAGTAAGTTACCAACAGATGCACGGTTTCAGCGCAGAACAACTGCGTAATACCACTCATCTGGTGTGGGCGACGGGAGGTGGAATGGTGCCGGAAGAAGAGATGAATCAATATCTGGCAAAAGGCCGTTAA", + "dna_sequence_length": 1329, + "functions": [ + "D-serine dehydratase" + ], + "id": "CDS_2351", + "location": [ + [ + "NC_000913", + 2479202, + "+", + 1329 + ] + ], + "md5": "bc467144a287d9d4549b19646765dcb7", + "parent_gene": "", + "protein_md5": "66ae0b1304ebaa72502caea0b4321b60", + "protein_translation": "MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007806" + ], + [ + "gene_synonym", + "ECK2363" + ], + [ + "gene_synonym", + "EcoGene:EG13283" + ], + [ + "gene_synonym", + "GI:16130299" + ], + [ + "gene_synonym", + "GeneID:946835" + ], + [ + "gene_synonym", + "JW2364" + ], + [ + "gene_synonym", + "NP_416868.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52600" + ], + [ + "gene_synonym", + "b2367" + ], + [ + "gene_synonym", + "emrY" + ] + ], + "dna_sequence": "ATGGCAATCACTAAATCAACTCCGGCACCATTAACCGGTGGGACGTTATGGTGCGTCACTATTGCATTGTCATTAGCGACATTTATGCAAATGTTGGATTCCACTATTTCTAACGTCGCAATACCGACAATATCTGGCTTTCTGGGAGCATCAACAGACGAAGGCACCTGGGTTATCACCTCGTTTGGTGTAGCAAATGCCATTGCGATCCCTGTTACTGGCAGGTTGGCACAAAGAATAGGCGAATTAAGATTATTTTTACTTTCAGTCACTTTTTTTTCGCTGTCTTCATTAATGTGTAGCCTATCGACCAATCTTGATGTGCTGATATTTTTTAGAGTCGTTCAGGGGTTAATGGCGGGGCCGTTAATTCCACTGTCACAGAGTTTATTATTAAGGAATTATCCGCCAGAAAAAAGAACATTTGCTCTGGCATTATGGTCAATGACCGTGATTATCGCTCCGATATGTGGGCCGATATTGGGCGGTTATATTTGTGATAACTTTAGCTGGGGTTGGATATTTTTAATCAATGTCCCTATGGGGATTATCGTCCTGACATTATGCTTAACCTTACTTAAAGGAAGAGAAACTGAGACTTCACCGGTCAAAATGAATCTACCAGGACTGACCCTGTTAGTGCTCGGTGTTGGTGGCTTGCAAATTATGCTTGATAAAGGGCGCGATCTGGATTGGTTCAACTCGAGTACAATAATAATATTAACAGTAGTATCAGTTATTTCTCTGATCTCTTTAGTCATTTGGGAGTCGACCTCAGAGAACCCGATTCTTGATCTCAGTTTGTTTAAGTCCCGTAACTTCACCATTGGTATTGTGAGTATCACATGCGCGTATTTATTTTACTCTGGAGCGATCGTCCTTATGCCGCAGTTACTCCAGGAAACGATGGGGTATAATGCGATATGGGCCGGACTTGCTTATGCGCCCATCGGCATCATGCCACTATTAATTTCACCTTTGATAGGACGTTATGGCAACAAAATAGACATGCGGTTGTTAGTGACATTTAGTTTTTTGATGTATGCGGTTTGCTATTACTGGCGTTCTGTGACATTTATGCCAACGATTGATTTTACAGGCATCATTTTGCCGCAGTTTTTTCAGGGATTCGCCGTTGCCTGTTTCTTTTTACCCTTAACAACGATTTCGTTTTCAGGCTTGCCAGATAATAAATTTGCCAATGCCTCGAGTATGAGTAATTTTTTTCGTACCTTGTCAGGATCAGTTGGTACGTCGTTGACAATGACGCTGTGGGGACGACGCGAATCGTTACACCATAGTCAGTTGACAGCAACCATCGATCAATTTAACCCCGTGTTTAATTCATCGTCACAAATTATGGATAAATATTATGGTTCGCTTTCAGGAGTTCTTAATGAAATTAATAATGAAATAACCCAGCAGTCACTTTCTATTTCTGCAAATGAGATTTTCCGTATGGCGGCTATTGCTTTTATCTTACTTACGGTTTTGGTTTGGTTTGCGAAACCGCCGTTTACAGCGAAAGGCGTTGGGTGA", + "dna_sequence_length": 1539, + "functions": [ + "putative multidrug efflux system" + ], + "id": "CDS_2352", + "location": [ + [ + "NC_000913", + 2482176, + "-", + 1539 + ] + ], + "md5": "50ed582cd594680bb8102dee4214bc83", + "parent_gene": "", + "protein_md5": "ba44998f4457e92019e2ad734cc9e0f6", + "protein_translation": "MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTAKGVG", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007808" + ], + [ + "gene_synonym", + "ECK2364" + ], + [ + "gene_synonym", + "EcoGene:EG13282" + ], + [ + "gene_synonym", + "GI:16130300" + ], + [ + "gene_synonym", + "GeneID:946840" + ], + [ + "gene_synonym", + "JW2365" + ], + [ + "gene_synonym", + "NP_416869.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52599" + ], + [ + "gene_synonym", + "b2368" + ], + [ + "gene_synonym", + "emrK" + ] + ], + "dna_sequence": "GTGGAACAGATTAATTCAAATAAAAAACATTCTAACAGAAGAAAATACTTTTCTTTATTGGCGGTAGTTTTATTTATTGCGTTTTCAGGTGCCTATGCCTATTGGTCAATGGAATTAGAAGACATGATTAGTACAGATGACGCCTATGTCACGGGGAATGCAGATCCAATTTCTGCACAAGTCTCAGGTAGTGTCACTGTCGTTAATCATAAAGATACGAACTACGTTCGACAAGGTGACATTTTAGTTTCACTGGATAAAACTGATGCCACTATCGCACTCAATAAAGCTAAAAATAATCTGGCAAATATTGTTCGGCAAACGAATAAACTATACTTACAGGATAAACAATACAGTGCCGAAGTCGCTTCAGCACGTATTCAGTATCAACAATCTTTAGAAGATTATAACCGTCGAGTGCCGTTAGCGAAGCAGGGGGTTATTTCAAAAGAAACGCTGGAGCATACCAAAGATACGTTAATAAGTAGCAAAGCGGCATTGAATGCCGCTATCCAGGCTTATAAAGCGAATAAAGCTTTAGTAATGAACACACCATTAAACCGTCAGCCACAAGTCGTTGAAGCGGCGGATGCAACTAAAGAAGCCTGGTTGGCGCTTAAACGTACGGATATTAAGAGTCCGGTTACCGGCTATATTGCCCAGAGAAGTGTTCAGGTCGGCGAAACAGTGAGCCCCGGACAATCGTTAATGGCTGTCGTACCGGCACGTCAAATGTGGGTTAATGCCAACTTTAAAGAAACACAACTCACGGATGTACGGATTGGTCAATCGGTCAATATTATCAGCGATCTTTATGGTGAAAATGTTGTGTTTCATGGTCGGGTGACAGGGATCAATATGGGAACCGGCAATGCGTTCTCCTTATTACCTGCACAAAATGCGACAGGGAACTGGATCAAAATCGTTCAGCGTGTACCGGTTGAAGTTTCTCTTGATCCAAAAGAACTCATGGAACACCCCTTGCGTATTGGTTTATCGATGACAGCAACTATTGATACGAAGAACGAAGACATTGCCGAGATGCCTGAGCTGGCTTCAACCGTGACCTCCATGCCGGCTTATACCAGTAAGGCTTTAGTTATCGATACCAGTCCGATAGAAAAAGAAATTAGCAACATTATTTCGCATAATGGACAACTTTAA", + "dna_sequence_length": 1164, + "functions": [ + "multidrug resistance efflux pump membrane fusion protein" + ], + "id": "CDS_2353", + "location": [ + [ + "NC_000913", + 2483339, + "-", + 1164 + ] + ], + "md5": "a512bcfdba1d2514a5d55cd6a2fcdfcc", + "parent_gene": "", + "protein_md5": "a8140435235927124084a64f543a9ab2", + "protein_translation": "MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007817" + ], + [ + "gene_synonym", + "ECK2365" + ], + [ + "gene_synonym", + "EcoGene:EG11609" + ], + [ + "gene_synonym", + "GI:16130301" + ], + [ + "gene_synonym", + "GeneID:946841" + ], + [ + "gene_synonym", + "JW2366" + ], + [ + "gene_synonym", + "NP_416870.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ4" + ], + [ + "gene_synonym", + "b2369" + ], + [ + "gene_synonym", + "evgA" + ] + ], + "dna_sequence": "ATGAACGCAATAATTATTGATGACCATCCTCTTGCTATCGCAGCAATTCGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGCTAAAAATGACCATTTTTACGGGAAACATTGTGCTGATGCTGGCGCTAATGGTTTCGTGAGTAAAAAAGAAGGCATGAACAATATCATTGCGGCTATTGAAGCTGCAAAAAATGGCTACTGCTATTTCCCCTTCTCTCTCAACCGGTTTGTTGGAAGTTTAACGTCCGACCAGCAAAAACTCGACTCCTTATCGAAACAAGAAATTAGTGTCATGCGGTATATTCTTGATGGCAAGGATAATAATGACATTGCTGAAAAAATGTTCATCAGCAACAAAACTGTCAGCACTTATAAAAGTCGCCTGATGGAAAAATTAGAATGTAAATCACTGATGGATCTTTACACATTCGCACAACGTAACAAAATCGGCTAA", + "dna_sequence_length": 615, + "functions": [ + "response regulator in two-component regulatory system with EvgS" + ], + "id": "CDS_2354", + "location": [ + [ + "NC_000913", + 2483755, + "+", + 615 + ] + ], + "md5": "2335d9ecbe4de6ae1c0184b82d9db67b", + "parent_gene": "", + "protein_md5": "0fc39431cf45f67ef9e76c9a1f225d7f", + "protein_translation": "MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007819" + ], + [ + "gene_synonym", + "ECK2366" + ], + [ + "gene_synonym", + "EcoGene:EG11610" + ], + [ + "gene_synonym", + "GI:16130302" + ], + [ + "gene_synonym", + "GeneID:946844" + ], + [ + "gene_synonym", + "JW2367" + ], + [ + "gene_synonym", + "NP_416871.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30855" + ], + [ + "gene_synonym", + "b2370" + ], + [ + "gene_synonym", + "evgS" + ] + ], + "dna_sequence": "ATGAAGTTTTTACCCTATATTTTTCTTCTCTGTTGTGGTCTTTGGTCGACCATAAGTTTCGCAGACGAAGATTACATCGAATATCGTGGCATCAGTAGTAACAACCGTGTCACACTTGATCCACTACGTCTGAGCAACAAGGAATTACGTTGGTTAGCGAGCAAAAAAAATCTTGTGATTGCAGTACATAAGTCCCAAACGGCTACGTTGTTGCATACCGATTCGCAGCAACGGGTTCGTGGTATTAATGCTGATTATTTAAATCTTTTAAAAAGAGCGTTAAATATCAAATTAACACTCCGGGAATACGCAGATCATCAAAAAGCAATGGACGCGCTTGCAGAAGGTGAAGTCGATATAGTGTTATCACATTTAGTTACTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAGCAGTATGATTTCCCGCTATTTCACTCACTCCTTAAATGTAGTGAAATATTATAACTCGCCGCGTCAATATAATTTTTTCTTGACCAGAAAAGAATCTGTCATTCTTAATGAAGTACTCAATAGATTTGTTGATGCTTTAACAAATGAAGTTCGCTATGAAGTATCACAAAATTGGCTTGATACAGGAAACCTGGCCTTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAATTTTTCTCCGATCACCGTTTCACACAATATCCATGCTGGAACACAGCTTAGCCCCGGAGGATGGGATATAATACCTGGCGCTATTTATAGTGAAGATCGAGAAAATAATGTTTTATTTGCTGAAGCCTTCATAACAACGCCTTACGTTTTTGTCATGCAAAAAGCGCCTGACAGTGAACAAACATTAAAAAAAGGAATGAAAGTTGCCATTCCATATTATTATGAGCTGCATTCGCAATTAAAAGAGATGTATCCGGAGGTTGAATGGATACAGGTCGATAATGCCAGCGCTGCATTTCACAAGGTTAAGGAAGGTGAACTTGATGCTCTGGTCGCGACACAGCTAAATTCGCGTTACATGATCGATCATTACTATCCTAATGAACTTTATCATTTTCTTATTCCTGGCGTTCCGAATGCATCGCTTTCGTTCGCTTTTCCTCGCGGAGAACCGGAACTTAAGGATATTATTAATAAAGCACTGAATGCAATTCCCCCAAGCGAAGTTCTGCGCCTGACGGAAAAATGGATTAAAATGCCCAATGTGACCATTGACACATGGGACCTATATAGCGAGCAATTTTATATTGTTACGACATTATCCGTTTTATTAGTTGGCAGTAGCCTTTTATGGGGATTCTACCTGTTACGCTCAGTTCGTCGTCGTAAAGTCATTCAGGGTGATTTAGAAAACCAAATATCATTCCGAAAAGCACTCTCGGATTCCTTACCGAATCCAACTTATGTTGTAAACTGGCAAGGTAATGTCATTAGTCATAATAGTGCTTTTGAACATTATTTCACTGCGGATTACTACAAAAATGCAATGTTACCATTAGAAAACAGTGACTCACCCTTTAAAGATGTTTTTTCTAATGCGCATGAAGTCACAGCAGAAACGAAAGAAAATCGAACAATATACACACAGGTATTTGAAATTGATAATGGCATCGAGAAAAGATGCATTAATCACTGGCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGGCTTCCTGGAACTTCTGTCGGGTTCTGGTCTTAGCAAGGAGCAACGGGTGGAGGCGATTTCACTTGCCTACGCCACCGGACAATCACTCCTCGGCTTAATTGGTGAAATCCTTGATGTCGACAAAATTGAATCGGGTAACTATCAACTTCAACCACAATGGGTCGATATCCCTACTTTAGTCCAGAACACTTGTCACTCTTTCGGTGCGATTGCTGCAAGCAAATCGATCGCATTAAGTTGCAGCAGTACGTTTCCTGAACATTACCTGGTTAAGATCGACCCTCAGGCGTTTAAGCAGGTCTTATCAAATTTACTGAGTAATGCTCTCAAATTTACCACCGAGGGGGCAGTAAAAATTACGACCTCCCTGGGTCACATTGATGACAACCACGCTGTTATCAAAATGACGATTATGGATTCTGGAAGTGGATTATCGCAGGAAGAACAACAACAACTGTTTAAACGCTACAGCCAAACAAGTGCAGGTCGTCAGCAAACAGGTTCTGGTTTAGGCTTAATGATCTGCAAAGAATTAATTAAAAATATGCAGGGCGATTTGTCATTAGAAAGTCATCCAGGCATAGGAACAACATTTACGATCACAATCCCGGTAGAAATTAGCCAGCAAGTGGCGACTGTCGAGGCAAAAGCAGAACAACCCATCACACTACCTGAAAAGTTGAGCATATTAATCGCGGATGATCATCCGACCAACAGGCTATTACTCAAACGCCAGCTAAATCTATTAGGATATGATGTTGATGAAGCCACTGATGGTGTGCAAGCGCTACACAAAGTCAGTATGCAACATTATGATCTGCTTATTACTGACGTTAATATGCCGAATATGGATGGTTTTGAGTTGACTCGCAAACTCCGTGAGCAAAATTCTTCCTTACCCATCTGGGGGCTTACAGCCAACGCACAGGCTAACGAACGTGAAAAAGGGTTAAGTTGCGGCATGAACTTATGTTTGTTCAAACCGTTGACCCTGGATGTACTGAAAACACATTTAAGTCAGTTACACCAAGTTGCGCATATTGCACCTCAGTATCGCCACCTTGATATCGAAGCCCTGAAAAATAATACGGCGAACGATCTACAACTGATGCAGGAGATTCTCATGACTTTCCAGCATGAAACGCATAAAGATCTACCCGCTGCGTTTCAAGCACTAGAAGCTGGCGATAACAGAACTTTCCATCAGTGTATTCATCGCATCCACGGTGCGGCTAACATCCTGAATTTGCAAAAGTTGATTAATATTAGCCATCAGTTAGAAATAACACCTGTTTCAGATGACAGTAAGCCTGAAATTCTTCAGTTGCTGAACTCTGTAAAAGAACACATTGCAGAGCTGGACCAGGAGATTGCTGTTTTCTGTCAGAAAAATGACTAA", + "dna_sequence_length": 3594, + "functions": [ + "hybrid sensory histidine kinase in two-component regulatory system with EvgA" + ], + "id": "CDS_2355", + "location": [ + [ + "NC_000913", + 2484374, + "+", + 3594 + ] + ], + "md5": "69c95332e4b06bbb85daad9ca12fa2e4", + "parent_gene": "", + "protein_md5": "13cc892ca9e2b99dd7c3d4c2ab23c569", + "protein_translation": "MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND", + "protein_translation_length": 1197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007821" + ], + [ + "gene_synonym", + "ECK2367" + ], + [ + "gene_synonym", + "EcoGene:EG13284" + ], + [ + "gene_synonym", + "GI:162135906" + ], + [ + "gene_synonym", + "GeneID:946432" + ], + [ + "gene_synonym", + "JW2368" + ], + [ + "gene_synonym", + "NP_416872.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76518" + ], + [ + "gene_synonym", + "b2371" + ], + [ + "gene_synonym", + "yfdE" + ] + ], + "dna_sequence": "ATGACAAATAATGAAAGCAAAGGGCCGTTTGAAGGCTTATTAGTTATCGATATGACACATGTCCTTAATGGACCTTTCGGAACTCAACTTCTTTGTAATATGGGCGCAAGGGTAATTAAAGTTGAGCCGCCGGGTCATGGTGATGATACCCGCACATTTGGTCCCTATGTGGATGGACAGTCACTCTATTACAGTTTTATTAATCATGGCAAAGAGAGTGTGGTTCTTGATTTAAAGAATGATCACGATAAAAGTATATTTATAAATATGCTCAAACAAGCTGATGTATTAGCTGAGAATTTTCGCCCAGGTACAATGGAAAAACTGGGGTTTTCATGGGAAACGCTTCAAGAAATCAACCCGCGCCTCATATATGCTTCATCGTCAGGTTTCGGACATACCGGTCCGCTAAAAGATGCTCCTGCCTACGATACCATCATTCAGGCAATGAGCGGGATAATGATGGAAACAGGATATCCTGATGCTCCGCCAGTGCGCGTTGGTACATCTCTTGCGGATCTATGCGGCGGTGTCTATTTATTCAGCGGAATAGTGAGTGCACTTTATGGCCGCGAAAAGAGCCAGAGAGGGGCGCATGTCGATATAGCGATGTTTGATGCCACGCTGAGTTTTCTGGAGCATGGTCTGATGGCATATATCGCAACTGGGAAGTCACCACAACGTCTGGGAAATCGCCATCCCTACATGGCACCTTTTGATGTTTTCAATACTCAGGATAAGCCGATTACGATTTGTTGTGGTAATGACAAGCTTTTTTCTGCGTTATGCCAGGCACTGGAGCTTACGGAACTGGTTAATGATCCCCGATTTAGCAGCAATATTTTACGCGTACAAAACCAGGCTATTCTTAAACAATATATTGAGCGGACGTTAAAAACGCAGGCAGCTGAAGTTTGGTTAGCCAGAATACATGAAGTTGGTGTACCCGTCGCGCCGTTATTAAGTGTGGCTGAGGCCATTAAATTGCCACAAACTCAGGCGAGAAATATGTTGATTGAAGCCGGGGGAATAATGATGCCGGGTAATCCGATAAAAATCAGCGGCTGCGCGGACCCGCATGTTATGCCGGGAGCGGCAACGCTCGACCAGCATGGGGAACAAATTCGCCAGGAGTTCTCATCATAA", + "dna_sequence_length": 1146, + "functions": [ + "acetyl-CoA:oxalate CoA-transferase" + ], + "id": "CDS_2356", + "location": [ + [ + "NC_000913", + 2489168, + "-", + 1146 + ] + ], + "md5": "a57b387fe76f55abd350c2f1cc3aa4b6", + "parent_gene": "", + "protein_md5": "8155697a9afcb04958b3261f25646398", + "protein_translation": "MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007824" + ], + [ + "gene_synonym", + "ECK2368" + ], + [ + "gene_synonym", + "EcoGene:EG14144" + ], + [ + "gene_synonym", + "GI:16130304" + ], + [ + "gene_synonym", + "GeneID:949110" + ], + [ + "gene_synonym", + "JW2369" + ], + [ + "gene_synonym", + "NP_416873.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA49" + ], + [ + "gene_synonym", + "b2372" + ], + [ + "gene_synonym", + "yfdV" + ] + ], + "dna_sequence": "ATGCTAACATTTTTTATTGGCGATTTATTGCCTATTATCGTAATCATGCTGTTGGGTTATTTTAGCGGCAGACGAGAAACATTTTCAGAAGATCAAGCTCGGGCATTTAATAAACTGGTATTAAACTACGCGCTTCCTGCGGCTCTATTTGTATCTATTACTCGGGCAAACAGGGAAATGATTTTTGCGGACACTCGTCTGACCCTTGTATCACTTGTGGTTATTGTCGGATGTTTCTTTTTCTCCTGGTTCGGTTGCTACAAATTTTTTAAACGTACCCATGCAGAAGCAGCTGTATGTGCATTAATTGCAGGTTCACCTACCATTGGATTCCTGGGGTTTGCAGTTCTCGATCCTATTTATGGTGATTCCGTATCAACAGGTTTAGTGGTAGCAATTATTTCTATTATTGTTAACGCAATTACTATTCCTATTGGTCTGTATTTGCTGAATCCTTCTTCAGGAGCGGATGGTAAGAAGAATAGTAATCTGAGCGCATTAATTTCTGCGGCAAAGGAGCCAGTAGTATGGGCACCTGTTCTGGCAACGATCCTGGTGTTGGTTGGGGTAAAAATTCCGGCAGCATGGGACCCAACCTTTAATCTGATTGCGAAGGCTAACTCAGGGGTAGCGGTATTCGCTGCGGGGTTGACTCTGGCTGCACATAAATTCGAGTTCAGTGCCGAAATTGCTTATAACACCTTCCTGAAGCTGATTCTGATGCCACTGGCACTGCTTCTCGTTGGTATGGCATGTCATTTGAACAGCGAACATCTGCAGATGATGGTACTGGCAGGCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAA", + "dna_sequence_length": 945, + "functions": [ + "putative transporter" + ], + "id": "CDS_2357", + "location": [ + [ + "NC_000913", + 2490186, + "-", + 945 + ] + ], + "md5": "403b703baa3671936b64f06eb546d880", + "parent_gene": "", + "protein_md5": "7e0148b9955b55d6cbdc9ebbfda702b9", + "protein_translation": "MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007826" + ], + [ + "gene_synonym", + "ECK2369" + ], + [ + "gene_synonym", + "EcoGene:EG14143" + ], + [ + "gene_synonym", + "GI:16130305" + ], + [ + "gene_synonym", + "GeneID:946845" + ], + [ + "gene_synonym", + "JW2370" + ], + [ + "gene_synonym", + "NP_416874.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI0" + ], + [ + "gene_synonym", + "b2373" + ], + [ + "gene_synonym", + "oxc" + ], + [ + "gene_synonym", + "yfdU" + ] + ], + "dna_sequence": "ATGTCAGATCAACTTCAAATGACAGATGGTATGCATATCATCGTTGAAGCATTAAAACAGAATAATATTGACACTATTTATGGTGTTGTAGGTATTCCTGTGACGGATATGGCACGCCATGCCCAGGCGGAAGGCATTCGTTATATTGGTTTTCGTCATGAGCAGTCGGCAGGCTATGCCGCTGCGGCAAGCGGTTTTCTTACCCAAAAACCGGGGATCTGCCTGACAGTTTCTGCGCCAGGATTCCTCAATGGTTTGACCGCATTGGCCAACGCAACGGTAAATGGTTTTCCGATGATCATGATTAGCGGCTCCAGCGACCGCGCGATCGTCGACCTACAGCAAGGTGATTATGAAGAGCTGGACCAAATGAATGCGGCAAAACCGTATGCCAAAGCAGCATTTCGCGTTAATCAGCCGCAGGATCTTGGCATTGCATTGGCACGCGCTATCCGGGTCTCTGTATCGGGTCGCCCTGGCGGAGTTTATCTTGATTTGCCAGCAAATGTCCTGGCCGCGACGATGGAAAAAGACGAAGCGTTAACCACGATTGTTAAAGTTGAAAATCCGTCGCCAGCATTATTGCCATGCCCGAAGTCAGTCACTAGCGCAATTTCGCTTTTAGCAAAAGCTGAACGGCCATTAATTATCCTTGGCAAAGGCGCGGCGTATTCACAAGCTGATGAACAGCTTCGTGAATTTATTGAAAGTGCTCAGATTCCATTCCTGCCAATGTCTATGGCGAAAGGGATCCTTGAAGATACGCATCCACTTTCTGCGGCAGCTGCGCGTTCGTTTGCCCTGGCAAATGCTGACGTTGTCATGCTTGTTGGTGCACGACTGAATTGGTTATTGGCACACGGTAAAAAAGGATGGGCGGCAGATACACAGTTTATTCAACTGGATATTGAACCGCAGGAAATTGACAGCAACCGCCCCATTGCTGTGCCAGTCGTTGGTGATATTGCATCCAGTATGCAAGGTATGCTGGCAGAACTGAAACAAAACACATTTACGACTCCACTGGTATGGCGCGATATTTTAAATATCCACAAGCAGCAAAATGCACAAAAAATGCATGAAAAATTAAGTACAGATACTCAACCATTAAATTACTTTAATGCATTAAGTGCTGTGCGCGACGTATTGCGCGAGAACCAGGATATTTATTTAGTTAATGAAGGTGCAAATACCCTGGATAATGCACGAAATATTATTGATATGTATAAACCACGTCGTCGTCTGGATTGTGGTACCTGGGGTGTCATGGGCATCGGTATGGGCTATGCCATCGGTGCTAGCGTGACTTCTGGTTCTCCGGTTGTCGCCATTGAAGGTGATAGTGCTTTTGGTTTCAGTGGGATGGAAATTGAAACGATTTGTCGATATAACCTGCCGGTGACGATCGTTATTTTTAATAATGGCGGCATCTACAGAGGAGACGGTGTTGATCTCAGTGGCGCTGGTGCACCATCACCAACGGATCTGTTGCACCATGCAAGGTATGACAAATTAATGGATGCGTTTCGTGGCGTTGGCTATAACGTCACCACGACAGATGAACTTCGTCATGCTTTAACCACCGGTATTCAGTCGCGCAAACCGACCATTATTAATGTGGTCATCGACCCTGCAGCAGGAACTGAAAGTGGCCATATTACCAAACTTAACCCAAAACAAGTCGCTGGTAATTAA", + "dna_sequence_length": 1695, + "functions": [ + "oxalyl CoA decarboxylase, ThDP-dependent" + ], + "id": "CDS_2358", + "location": [ + [ + "NC_000913", + 2491950, + "-", + 1695 + ] + ], + "md5": "085f72ff9bb68e31ee4a81db0ff64c8a", + "parent_gene": "", + "protein_md5": "77ee9dd7abd037d9298ee614cd78d715", + "protein_translation": "MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN", + "protein_translation_length": 564, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007828" + ], + [ + "gene_synonym", + "ECK2370" + ], + [ + "gene_synonym", + "EcoGene:EG14145" + ], + [ + "gene_synonym", + "GI:16130306" + ], + [ + "gene_synonym", + "GeneID:946842" + ], + [ + "gene_synonym", + "JW2371" + ], + [ + "gene_synonym", + "NP_416875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69902" + ], + [ + "gene_synonym", + "b2374" + ], + [ + "gene_synonym", + "frc" + ], + [ + "gene_synonym", + "yfdW" + ] + ], + "dna_sequence": "ATGTCAACTCCACTTCAAGGAATTAAAGTTCTCGATTTCACCGGTGTGCAATCTGGCCCATCTTGTACTCAAATGCTGGCCTGGTTTGGCGCTGACGTTATTAAAATTGAACGTCCCGGCGTTGGTGACGTAACGCGTCACCAGCTGCGAGATATTCCTGATATCGATGCGCTTTACTTCACCATGCTTAACAGTAACAAACGTTCTATTGAGTTAAATACCAAAACAGCGGAAGGCAAAGAGGTAATGGAAAAGCTGATCCGCGAAGCTGATATCTTAGTCGAGAACTTTCATCCAGGGGCCATTGATCACATGGGCTTCACCTGGGAGCATATTCAAGAAATCAATCCACGTCTGATTTTTGGTTCGATCAAAGGGTTTGATGAGTGTTCGCCTTATGTGAATGTAAAAGCCTATGAAAACGTTGCTCAGGCAGCGGGTGGCGCGGCATCCACTACGGGTTTTTGGGATGGTCCGCCGCTGGTAAGCGCTGCAGCGTTGGGTGACAGCAACACCGGAATGCATTTGCTGATCGGTTTACTTGCTGCTTTGCTGCATCGCGAAAAAACGGGGCGTGGGCAACGAGTCACCATGTCAATGCAGGATGCCGTATTGAACCTTTGCCGCGTGAAATTACGTGACCAGCAGCGTCTCGATAAATTGGGTTATCTGGAAGAATACCCGCAGTATCCGAATGGTACATTTGGTGATGCAGTTCCCCGCGGTGGTAATGCAGGTGGTGGCGGTCAGCCTGGCTGGATCCTGAAATGTAAAGGCTGGGAAACCGATCCTAACGCCTATATTTATTTCACTATTCAGGAGCAAAACTGGGAAAACACCTGTAAAGCCATCGGCAAACCAGAATGGATTACCGATCCGGCATACAGTACAGCCCATGCACGACAGCCACATATTTTCGATATTTTTGCTGAAATCGAAAAATACACTGTCACTATTGATAAACATGAAGCGGTGGCCTATTTGACTCAGTTTGATATTCCTTGTGCACCGGTTTTAAGTATGAAAGAAATTTCACTTGATCCCTCTTTGCGCCAAAGTGGCAGTGTTGTTGAAGTGGAACAACCGTTGCGTGGAAAATATCTGACCGTTGGTTGTCCAATGAAATTCTCTGCCTTTACGCCGGATATTAAAGCTGCGCCGCTATTAGGTGAACATACCGCTGCTGTATTGCAGGAGCTGGGTTATAGCGACGATGAAATTGCTGCAATGAAGCAAAACCACGCCATCTGA", + "dna_sequence_length": 1251, + "functions": [ + "formyl-CoA transferase, NAD(P)-binding" + ], + "id": "CDS_2359", + "location": [ + [ + "NC_000913", + 2493254, + "-", + 1251 + ] + ], + "md5": "b6c420afc398211dccf3bdd9a97567d3", + "parent_gene": "", + "protein_md5": "a1b3f0db2d213a76874f2397cd2e2bf2", + "protein_translation": "MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPLVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELGYSDDEIAAMKQNHAI", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007835" + ], + [ + "gene_synonym", + "ECK2371" + ], + [ + "gene_synonym", + "EcoGene:EG14146" + ], + [ + "gene_synonym", + "GI:16130307" + ], + [ + "gene_synonym", + "GeneID:949108" + ], + [ + "gene_synonym", + "JW2372" + ], + [ + "gene_synonym", + "NP_416876.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76520" + ], + [ + "gene_synonym", + "b2375" + ], + [ + "gene_synonym", + "yfdX" + ] + ], + "dna_sequence": "ATGAAACGTTTAATTATGGCCACGATGGTCACAGCAATTCTGGCATCTTCAACTGTATGGGCTGCTGATAATGCTCCGGTAGCGGCACAACAGCAAACTCAGCAAGTTCAGCAAACCCAGAAAACGGCAGCGGCAGCAGAGCGTATCTCTGAACAAGGTTTATATGCGATGCGTGACGTGCAGGTAGCGCGCCTGGCTCTGTTTCATGGCGATCCAGAAAAGGCAAAAGAACTGACCAATGAAGCTTCCGCTTTGCTGTCAGATGACAGTACCGAATGGGCAAAGTTCGCTAAGCCAGGTAAAAAGACCAATCTCAATGATGACCAATATATTGTCATTAATGCATCTGTCGGAATTTCTGAGAGTTATGTAGCAACTCCCGAAAAAGAAGCCGCGATAAAAATTGCCAATGAAAAAATGGCGAAAGGGGATAAAAAGGGCGCAATGGAAGAGCTTCGCCTGGCCGGTGTTGGCGTAATGGAAAACCAATATCTGATGCCACTTAAACAGACTCGTAATGCACTTGCTGATGCGCAGAAACTGCTTGATAAAAAGCAATACTACGAGGCAAACCTGGCGCTTAAAGGTGCGGAAGATGGAATCATCGTCGATAGCGAAGCACTGTTTGTGAACTAA", + "dna_sequence_length": 636, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2360", + "location": [ + [ + "NC_000913", + 2494402, + "-", + 636 + ] + ], + "md5": "aaa246fe9bd7ce93a4add43d4e9d6202", + "parent_gene": "", + "protein_md5": "b07a894e3f230acc90c1a5273123d953", + "protein_translation": "MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007839" + ], + [ + "gene_synonym", + "ECK2372" + ], + [ + "gene_synonym", + "EcoGene:EG14376" + ], + [ + "gene_synonym", + "GI:16130308" + ], + [ + "gene_synonym", + "GeneID:949107" + ], + [ + "gene_synonym", + "JW2373" + ], + [ + "gene_synonym", + "NP_416877.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:O32528" + ], + [ + "gene_synonym", + "b2376" + ], + [ + "gene_synonym", + "ypdI" + ] + ], + "dna_sequence": "ATGAAAGTAAACTTAATACTTTTCAGCTTATTTTTATTGGTCTCTATTATGGCATGCAATGTTTTTGCATTTTCCATTTCGGGTGGTGGAAGTGAGAGGAGCTATAAAGAGACTGAAAAAACATCAGCGATGACGACCACACACTCTACAAAACTTCAGCCATCACAGGCGATTTTGTTTAAGATGAGAGAAGATGCGCCACCATTAAACCTCACAGAAGAAATGCCGCCCCCTTTTCCGACAAAGGCGAATTATCTTATTCATCCTGTGCGATAG", + "dna_sequence_length": 276, + "functions": [ + "putative lipoprotein involved in colanic acid biosynthesis" + ], + "id": "CDS_2361", + "location": [ + [ + "NC_000913", + 2494698, + "+", + 276 + ] + ], + "md5": "3a368a294e2aa8acd9d8a48835facad8", + "parent_gene": "", + "protein_md5": "f1de08eee2dd68aad0b51a9643fd73e7", + "protein_translation": "MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007841" + ], + [ + "gene_synonym", + "ECK2373" + ], + [ + "gene_synonym", + "EcoGene:EG14147" + ], + [ + "gene_synonym", + "GI:16130309" + ], + [ + "gene_synonym", + "GeneID:948842" + ], + [ + "gene_synonym", + "JW2374" + ], + [ + "gene_synonym", + "NP_416878.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76521" + ], + [ + "gene_synonym", + "b2377" + ], + [ + "gene_synonym", + "yfdY" + ] + ], + "dna_sequence": "ATGATTAATTTATGGATGTTTCTCGCCCTGTGTATTGTCTGCGTAAGCGGCTACATCGGTCAGGTACTGAACGTGGTATCGGCGGTCTCTTCTTTCTTCGGCATGGTGATCCTCGCTGCACTCATTTATTACTTCACCATGTGGTTAACTGGCGGTAATGAACTAGTGACGGGGATATTTATGTTTCTTGCCCCGGCTTGTGGCTTGATGATTCGCTTTATGGTGGGGTATGGCAGGCGGTAG", + "dna_sequence_length": 243, + "functions": [ + "DUF2545 family putative inner membrane protein" + ], + "id": "CDS_2362", + "location": [ + [ + "NC_000913", + 2495292, + "-", + 243 + ] + ], + "md5": "7b966701363ee7c3662e7b746a969ad3", + "parent_gene": "", + "protein_md5": "091c2d0c6fb2a0b381797e22f2b05b47", + "protein_translation": "MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007848" + ], + [ + "gene_synonym", + "ECK2374" + ], + [ + "gene_synonym", + "EcoGene:EG12901" + ], + [ + "gene_synonym", + "GI:90111426" + ], + [ + "gene_synonym", + "GeneID:946847" + ], + [ + "gene_synonym", + "JW2375" + ], + [ + "gene_synonym", + "NP_416879.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV2" + ], + [ + "gene_synonym", + "b2378" + ], + [ + "gene_synonym", + "ddg" + ], + [ + "gene_synonym", + "lpxP" + ] + ], + "dna_sequence": "ATGTTTCCACAATGCAAATTTTCCCGCGAGTTTCTACATCCTCGCTACTGGCTCACATGGTTTGGGCTTGGTGTACTCTGGCTTTGGGTACAGCTTCCTTATCCTGTTCTCTGCTTTCTCGGCACGCGTATTGGCGCAATGGCGCGACCATTCCTGAAACGTCGTGAATCTATCGCCCGTAAAAACCTGGAACTTTGTTTCCCGCAGCATTCTGCGGAAGAACGCGAGAAGATGATTGCCGAAAACTTTCGTTCACTCGGCATGGCGCTGGTAGAAACCGGCATGGCATGGTTCTGGCCCGACAGTCGCGTACGTAAATGGTTTGATGTTGAAGGGTTGGATAACCTTAAACGCGCACAAATGCAAAATCGCGGCGTAATGGTTGTCGGCGTCCATTTTATGTCGCTGGAACTGGGCGGCCGCGTGATGGGACTGTGCCAACCAATGATGGCTACCTATCGTCCACATAATAATCAGCTGATGGAATGGGTGCAGACCCGTGGGCGCATGCGCTCTAACAAAGCGATGATCGGCAGAAATAATCTGCGCGGCATTGTCGGTGCACTGAAGAAAGGTGAAGCGGTATGGTTTGCTCCCGATCAGGATTATGGTCGTAAAGGCAGCTCCTTCGCGCCGTTCTTTGCGGTGGAAAATGTCGCCACAACCAATGGCACCTATGTTCTCTCCCGTCTCTCTGGCGCAGCCATGTTGACCGTAACGATGGTAAGAAAAGCGGATTACAGCGGATATCGTTTGTTCATCACCCCAGAGATGGAAGGCTACCCGACAGATGAAAATCAAGCCGCTGCCTATATGAACAAGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAA", + "dna_sequence_length": 921, + "functions": [ + "palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase" + ], + "id": "CDS_2363", + "location": [ + [ + "NC_000913", + 2495645, + "+", + 921 + ] + ], + "md5": "3c5b716d395b7fbacde6fac30f58ad16", + "parent_gene": "", + "protein_md5": "b89b8135a0832160fefc7ab66c6078a5", + "protein_translation": "MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRIGAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVGESSLYI", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4495" + ], + [ + "gene_synonym", + "EcoGene:EG14485" + ], + [ + "gene_synonym", + "GI:226524735" + ], + [ + "gene_synonym", + "GeneID:7751622" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P610" + ], + [ + "gene_synonym", + "YP_002791250.1" + ], + [ + "gene_synonym", + "b4680" + ], + [ + "gene_synonym", + "ypdK" + ] + ], + "dna_sequence": "GTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAA", + "dna_sequence_length": 72, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_2364", + "location": [ + [ + "NC_000913", + 2496921, + "+", + 72 + ] + ], + "md5": "21a4765c01ab9e0c8997da8f687e5241", + "parent_gene": "", + "protein_md5": "15d7cd31fdfbd36fd52ef0cf3e1bb039", + "protein_translation": "MKYFFMGISFMVIVWAGTFALMI", + "protein_translation_length": 23, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007850" + ], + [ + "gene_synonym", + "ECK2375" + ], + [ + "gene_synonym", + "EcoGene:EG14198" + ], + [ + "gene_synonym", + "GI:16130311" + ], + [ + "gene_synonym", + "GeneID:946850" + ], + [ + "gene_synonym", + "JW2376" + ], + [ + "gene_synonym", + "NP_416880.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77434" + ], + [ + "gene_synonym", + "alaC" + ], + [ + "gene_synonym", + "b2379" + ], + [ + "gene_synonym", + "yfdZ" + ] + ], + "dna_sequence": "ATGGCTGACACTCGCCCTGAACGTCGCTTTACGCGCATTGATCGTCTCCCGCCCTACGTTTTTAACATCACCGCTGAACTGAAAATGGCTGCGCGTCGGCGCGGCGAAGATATTATCGATTTCAGCATGGGTAACCCGGACGGTGCGACTCCGCCGCATATCGTCGAAAAATTATGTACTGTGGCCCAGCGCCCGGACACGCATGGTTACTCCACTTCACGCGGCATTCCGCGGTTACGTCGCGCCATTTCCCGCTGGTATCAGGATCGCTACGACGTTGAAATCGACCCGGAATCAGAAGCCATCGTCACTATTGGTTCGAAAGAGGGCCTGGCGCATCTGATGCTGGCGACGCTGGATCATGGTGACACGGTGCTGGTGCCGAATCCAAGTTACCCGATCCATATTTATGGCGCGGTGATTGCCGGGGCGCAGGTACGCTCAGTGCCGCTGGTGGAAGGTGTCGATTTCTTCAACGAACTGGAGCGAGCCATTCGTGAAAGTTATCCGAAACCGAAGATGATGATCCTCGGCTTCCCGTCAAACCCAACCGCGCAATGCGTGGAACTGGAGTTCTTCGAAAAAGTAGTGGCGCTGGCGAAACGCTACGATGTGCTGGTGGTCCATGACCTGGCCTATGCCGATATCGTCTACGATGGCTGGAAAGCGCCGTCAATTATGCAGGTACCGGGTGCACGCGATGTGGCAGTCGAGTTCTTTACGCTGTCGAAAAGCTACAACATGGCGGGCTGGCGTATCGGCTTTATGGTTGGCAACAAAACGCTGGTCAGCGCCCTGGCTCGTATTAAAAGCTATCACGATTACGGCACCTTTACGCCGTTGCAGGTGGCGGCGATTGCGGCGCTGGAGGGCGATCAACAGTGCGTGCGCGACATTGCCGAACAGTACAAACGCCGCCGTGATGTATTGGTTAAAGGGCTGCATGAAGCGGGCTGGATGGTTGAAATGCCGAAGGCTTCGATGTATGTCTGGGCGAAAATCCCGGAACCATATGCGGCCATGGGATCGCTGGAATTTGCCAAGAAGCTCCTTAACGAAGCGAAGGTTTGTGTCTCGCCGGGGATTGGCTTTGGCGACTATGGTGATACGCATGTTCGCTTTGCACTGATTGAAAACCGCGACCGTATTCGTCAGGCCATCAGAGGGATTAAAGCGATGTTCCGTGCCGACGGTTTACTACCCGCCAGCAGCAAACATATTCACGAAAACGCGGAATAA", + "dna_sequence_length": 1239, + "functions": [ + "glutamate-pyruvate aminotransferase", + "glutamic-pyruvic transaminase (GPT)", + "alanine transaminase" + ], + "id": "CDS_2365", + "location": [ + [ + "NC_000913", + 2498295, + "-", + 1239 + ] + ], + "md5": "d845d80ea7d96528d19ca014633ebb1d", + "parent_gene": "", + "protein_md5": "8902fe615cdfe858076263ea63c7a812", + "protein_translation": "MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007855" + ], + [ + "gene_synonym", + "ECK2376" + ], + [ + "gene_synonym", + "EcoGene:EG14148" + ], + [ + "gene_synonym", + "GI:16130312" + ], + [ + "gene_synonym", + "GeneID:946723" + ], + [ + "gene_synonym", + "JW5388" + ], + [ + "gene_synonym", + "NP_416881.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA93" + ], + [ + "gene_synonym", + "b2380" + ], + [ + "gene_synonym", + "ypdA" + ] + ], + "dna_sequence": "GTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATGCTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGAACTGTTGCACAAGTCGGCGCACTCCCCAAAAGAATTGCTCGCCGTTACCGCCATTTTCTCGCTGTTCGCCCTGTTCAGCACCTGGTCCGGCGTTCCCGTAGAAGGCTCGCTGGTGAACGTACGTATTATCGCGGTGATGTCCGGCGGGATTCTGTTTGGCCCGTGGGTAGGCATCATTACCGGCGTGATTGCGGGTATTCACCGGTATTTAATTGATATCGGCGGCGTGACGGCGATCCCCTGCTTTATCACCAGCATTCTGGCGGGTTGTATATCGGGCTGGATCAACCTGAAAATCCCCAAAGCACAGCGCTGGCGCGTCGGTATTCTCGGCGGCATGTTGTGTGAGACGTTGACCATGATTCTGGTAATTGTCTGGGCACCAACTACCGCGTTGGGGATCGATATCGTCTCTAAAATCGGCATTCCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGTGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGAAATGGCGGTCGGTCTGTCGCAAATCATCTCCACGCAACTGGAGGTTTCACGCGCCGAGCAGCTACGTGAAATGGCAAATAAGGCAGAGCTTCGCGCCCTGCAAAGCAAAATTAATCCCCATTTTCTGTTTAACGCTCTGAACGCTATTTCATCGTCAATCCGTCTGAATCCGGATACCGCTCGCCAGTTGATCTTTAATCTGTCGCGTTATCTGCGCTATAACATTGAATTAAAAGACGATGAGCAAATCGATATCAAAAAAGAGCTGTATCAAATTAAAGACTATATTGCCATTGAGCAGGCCCGCTTTGGTGACAAGCTGACGGTTATCTATGATATTGATGAAGAGGTGAATTGCTGCATTCCCAGCCTGCTGATCCAGCCGTTGGTGGAGAACGCCATTGTCCACGGTATTCAGCCTTGCAAAGGTAAAGGCGTTGTCACCATCAGCGTTGCAGAGTGCGGAAATCGGGTACGCATTGCGGTGCGAGATACCGGGCACGGCATCGATCCAAAGGTGATTGAGCGGGTCGAAGCGAATGAAATGCCGGGCAATAAAATTGGCCTGCTGAATGTCCATCATCGCGTGAAGTTATTGTATGGCGAGGGGCTGCATATCCGCCGCCTGGAGCCGGGGACGGAAATTGCGTTTTACATTCCTAACCAACGCACCCCAGTCGCCTCACAGGCTACGTTATTGCTTTGA", + "dna_sequence_length": 1698, + "functions": [ + "sensor kinase regulating yhjX", + "pyruvate-responsive YpdAB two-component system" + ], + "id": "CDS_2366", + "location": [ + [ + "NC_000913", + 2498671, + "+", + 1698 + ] + ], + "md5": "062ea2b981421b45f1be9b3ea91a2a5e", + "parent_gene": "", + "protein_md5": "6940b27d7110f83692416b0aa34fa30f", + "protein_translation": "MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL", + "protein_translation_length": 565, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007857" + ], + [ + "gene_synonym", + "ECK2377" + ], + [ + "gene_synonym", + "EcoGene:EG14149" + ], + [ + "gene_synonym", + "GI:16130313" + ], + [ + "gene_synonym", + "GeneID:947395" + ], + [ + "gene_synonym", + "JW2378" + ], + [ + "gene_synonym", + "NP_416882.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE39" + ], + [ + "gene_synonym", + "b2381" + ], + [ + "gene_synonym", + "ypdB" + ] + ], + "dna_sequence": "GTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTGACGACGGTCTGGACGTGTTGAAGTTTTTGCAGCATAACCGCGTCGACGCCATTTTTCTGGATATCAATATTCCGTCGCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGATGCTGCAAAAACTGGAAGCGGCCTGGCAACAACAGCAGACCAGCAGTACGCCTGCCGCGACGGTAACGCGTGAGAATGACACCATTAATCTGGTGAAAGATGAGCGAATAATCGTCACGCCAATTAACGATATCTATTACGCCGAAGCGCACGAGAAAATGACCTTTGTCTATACGCGGCGTGAATCCTACGTAATGCCGATGAACATTACCGAATTTTGCAGCAAACTGCCGCCGTCGCATTTTTTCCGCTGCCATCGCTCATTTTGTGTCAATCTGAACAAAATACGCGAAATCGAACCGTGGTTTAATAACACCTACATTCTGCGACTGAAAGATCTGGATTTTGAAGTGCCGGTCAGCCGCAGCAAAGTGAAAGAATTTCGCCAGTTAATGCATCTTTAA", + "dna_sequence_length": 735, + "functions": [ + "response regulator activating yhjX", + "pyruvate-responsive YpdAB two-component system" + ], + "id": "CDS_2367", + "location": [ + [ + "NC_000913", + 2500383, + "+", + 735 + ] + ], + "md5": "273bb76ff28fbe3d65fb1015bec8e2d4", + "parent_gene": "", + "protein_md5": "0c2815c3b688a45b37f4d302f75c804f", + "protein_translation": "MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007859" + ], + [ + "gene_synonym", + "ECK2378" + ], + [ + "gene_synonym", + "EcoGene:EG14150" + ], + [ + "gene_synonym", + "GI:16130314" + ], + [ + "gene_synonym", + "GeneID:946856" + ], + [ + "gene_synonym", + "JW2379" + ], + [ + "gene_synonym", + "NP_416883.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77396" + ], + [ + "gene_synonym", + "b2382" + ], + [ + "gene_synonym", + "ypdC" + ] + ], + "dna_sequence": "ATGAAAGCACCAGGCTTGCCCGCCGATCAACAATTTTTCGCCGATCTGTTCAGCGGCCTGGTGCTTAACCCGCAACTACTGGGGCGCGTCTGGTTTGCCAGCCAGCCTGCCTCGTTGCCGGTGGGCAGTTTATGTATTGATTTTCCCCGTCTGGATATCGTGCTGCGCGGCGAATACGGCAATCTGCTGGAAGCAAAGCAGCAACGTTTGGTGGAAGGAGAAATGCTGTTTATTCCGGCGCGCGCGGCTAATTTACCGGTCAACAACAAACCGGTGATGCTGTTAAGCCTGGTGTTCGCTCCGACCTGGCTTGGGTTATCGTTTTACGATAGCCGCACCACGTCGTTGTTGCATCCTGCTCGCCAGATCCAGCTTCCCAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATGCCGCCGGGCAATTCGCAGCCGCGCGGCGATTTTCTCTATCACAGCATTTGTAACTGGGTTCAGGATAATTATGCCCAGCCGCTCACCCGCGAGAGCGTGGCGCAGTTTTTTAATATCACGCCCAATCATCTGTCAAAACTGTTTGCTCAGCATGGAACGATGCGTTTTATCGAGTATGTGCGTTGGGTGCGAATGGCGAAGGCGAGGATGATTTTGCAGAAATATCATCTGTCAATTCATGAAGTGGCACAGCGTTGCGGTTTTCCGGATAGCGACTATTTTTGTCGCGTTTTCCGGCGTCAGTTTGGTCTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAA", + "dna_sequence_length": 858, + "functions": [ + "putative DNA-binding protein" + ], + "id": "CDS_2368", + "location": [ + [ + "NC_000913", + 2501130, + "+", + 858 + ] + ], + "md5": "b5ebd694f1f1a49d56b04cf51c1bbf72", + "parent_gene": "", + "protein_md5": "0609a0a5c9d4527db1bd643c118e9fd1", + "protein_translation": "MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007861" + ], + [ + "gene_synonym", + "ECK2379" + ], + [ + "gene_synonym", + "EcoGene:EG14151" + ], + [ + "gene_synonym", + "GI:16130315" + ], + [ + "gene_synonym", + "GeneID:946852" + ], + [ + "gene_synonym", + "JW2380" + ], + [ + "gene_synonym", + "NP_416884.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77439" + ], + [ + "gene_synonym", + "b2383" + ], + [ + "gene_synonym", + "fryA" + ], + [ + "gene_synonym", + "ypdD" + ] + ], + "dna_sequence": "ATGTTAACGATTCAATTTCTCTGTCCTTTGCCTAACGGTCTACATGCTCGTCCGGCGTGGGAACTTAAAGAACAGTGCAGCCAGTGGCAAAGCGAAATCACTTTTATTAACCATCGCCAGAACGCAAAGGCAGATGCGAAAAGCTCGCTGGCGCTGATTGGCACCGGCACCCTATTTAATGACAGTTGCAGCCTGAACATTAGCGGCAGCGATGAAGAGCAGGCGCGGCGCGTGCTGGAAGAGTACATCCAGGTGCGCTTTATCGACAGCGACAGCGTTCAGCCTACGCAGGCAGAACTGACGGCGCATCCGCTGCCGCGTTCATTAAGCCGCCTTAACCCGGATTTACTGTACGGCAATGTGCTGGCAAGCGGCGTCGGCGTGGGTACGCTGACCCTGTTACAAAGCGACAGCCTCGACAGTTATCGGGCAATCCCCGCCAGTGCGCAAGATTCCACCCGGCTGGAGCACAGCCTGGCAACGCTTGCCGAGCAACTGAACCAGCAATTGCGTGAGCGTGACGGCGAAAGCAAAACTATCCTCAGCGCCCATTTGTCGCTGATTCAGGATGATGAATTTGCAGGCAATATCCGTCGCCTGATGACAGAACAGCATCAGGGGCTGGGGGCGGCGATCATCAGCAATATGGAGCAGGTTTGCGCCAAACTTTCTGCCTCTGCCAGCGATTATCTGCGCGAACGTGTTAGCGACATTCGCGATATCAGCGAACAGTTGCTGCATATCACCTGGCCGGAACTGAAGCCGCGCAACAAGCTGGTGCTTGAAAAACCGACCATTCTGGTGGCTGAAGATTTAACCCCAAGCCAGTTTTTGAGCCTTGATTTGAAAAATCTTGCGGGCATGATTCTGGAGAAAACCGGGCGCACCTCGCATACACTGATTCTGGCCCGTGCCTCGGCGATCCCGGTACTGAGTGGCTTGCCGCTGGATGCGATTGCCCGTTATGCCGGGCAACCTGCAGTGCTTGACGCCCAGTGCGGCGTGCTGGCGATTAACCCGAATGACGCGGTGAGCGGTTATTATCAGGTCGCGCAGACGCTGGCGGATAAACGCCAAAAACAACAGGCGCAGGCTGCCGCGCAGCTGGCCTATTCCCGTGATAACAAGCGTATTGATATTGCGGCGAATATCGGCACCGCTCTGGAAGCGCCAGGCGCGTTTGCCAACGGCGCGGAAGGTGTCGGGCTGTTCCGTACCGAAATGCTCTATATGGATCGCGACAGCGCGCCGGACGAGCAGGAGCAATTTGAAGCCTACCAGCAGGTGCTACTGGCGGCGGGCGACAAGCCGATTATCTTCCGCACGATGGACATCGGCGGCGATAAAAGCATTCCTTATCTGAATATTCCCCAGGAAGAGAACCCGTTCCTCGGCTATCGCGCGGTACGTATTTACCCGGAATTTGCTGGCCTGTTCCGCACTCAACTGCGGGCCATTTTGCGCGCCGCCAGTTTCGGCAACGCCCAGTTGATGATCCCGATGGTTCACAGCCTCGATCAGATCTTATGGGTGAAAGGCGAGATCCAAAAAGCGATCGTTGAGCTTAAGCGCGATGGCCTGCGTCATGCAGAGACGATTACGCTTGGGATCATGGTGGAAGTTCCGTCGGTGTGCTACATCATCGACCACTTCTGCGATGAGGTCGATTTCTTCAGTATCGGCTCCAACGATATGACCCAGTATCTGTATGCGGTCGATCGTAATAACCCGCGCGTATCGCCGCTATATAACCCGATTACGCCATCGTTCCTGCGCATGTTGCAGCAAATAGTTACCACTGCGCATCAGCGGGGCAAATGGGTAGGCATTTGCGGTGAACTGGGCGGTGAAAGCCGTTATCTGCCGCTACTGCTTGGGCTGGGCCTGGATGAGCTGAGTATGAGTAGCCCGCGTATTCCGGCGGTGAAAAGCCAGCTTCGTCAACTGGATAGCGAGGCGTGTCGGGAACTGGCGCGTCAGGCATGTGAATGCCGCAGTGCGCAGGAAATTGAAGCGTTACTCACCGCCTTTACGCCGGAAGAAGACGTTCGCCCACTGCTGGCGCTGGAGAATATCTTTGTTGATCAGGATTTTAGCAATAAAGAGCAGGCGATCCAGTTCCTGTGCGGCAACCTCGGCGTTAACGGGCGCACTGAACATCCGTTTGAGCTGGAAGAAGATGTCTGGCAGCGGGAAGAGATTGTTACCACCGGCGTTGGTTTTGGCGTAGCGATCCCGCACACCAAATCTCAGTGGATCCGTCATTCCAGTATCAGCATTGCCCGGCTGGCGAAACCGATTGGCTGGCAGTCAGAAATGGGCGAAGTCGAACTGGTGATCATGCTGACGCTGGGTGCTAACGAAGGGATGAATCATGTGAAAGTCTTCTCGCAGCTGGCGCGTAAACTGGTGAATAAAAACTTCCGCCAGTCGTTGTTTGCCGCGCAAGATGCACAAAGTATCCTGACGCTGCTGGAAACAGAATTAACCTTCTGA", + "dna_sequence_length": 2496, + "functions": [ + "putative PTS enzyme: Hpr, enzyme I and IIA components" + ], + "id": "CDS_2369", + "location": [ + [ + "NC_000913", + 2504485, + "-", + 2496 + ] + ], + "md5": "0e24723bb38e7c78afb9ebd886f969bc", + "parent_gene": "", + "protein_md5": "7417078e73a719b801f800934f78a215", + "protein_translation": "MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKADAKSSLALIGTGTLFNDSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTQAELTAHPLPRSLSRLNPDLLYGNVLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLATLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNKLVLEKPTILVAEDLTPSQFLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPGAFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKSIPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQILWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMTQYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLLLGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEEDVRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVGFGVAIPHTKSQWIRHSSISIARLAKPIGWQSEMGEVELVIMLTLGANEGMNHVKVFSQLARKLVNKNFRQSLFAAQDAQSILTLLETELTF", + "protein_translation_length": 831, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007864" + ], + [ + "gene_synonym", + "ECK2380" + ], + [ + "gene_synonym", + "EcoGene:EG14152" + ], + [ + "gene_synonym", + "GI:16130316" + ], + [ + "gene_synonym", + "GeneID:946848" + ], + [ + "gene_synonym", + "JW2381" + ], + [ + "gene_synonym", + "NP_416885.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77585" + ], + [ + "gene_synonym", + "b2384" + ], + [ + "gene_synonym", + "ypdE" + ] + ], + "dna_sequence": "ATGGATTTATCGCTATTAAAAGCGTTGAGCGAGGCAGATGCGATCGCCTCCTCGGAACAGGAAGTGCGGCAGATCCTGCTGGAAGAAGCGGATCGCCTGCAAAAAGAAGTGCGATTTGATGGTCTGGGATCGGTGCTGATCCGCCTGAATGAATCGACAGGTCCGAAGGTGATGATCTGTGCGCATATGGACGAAGTGGGATTTATGGTGCGCAGCATCTCCCGCGAAGGGGCGATTGATGTGCTGCCGGTTGGCAACGTACGCATGGCTGCCCGCCAGCTGCAGCCGGTGCGCATCACCACCCGTGAAGAGTGCAAAATTCCAGGCCTGCTTGACGGCGACCGGCAGGGGAATGACGTCAGCGCCATGCGCGTGGACATTGGTGCGCGCTCCTATGACGAAGTGATGCAGGCGGGAATTCGTCCCGGCGATCGCGTCACGTTTGATACCACTTTTCAGGTTCTCCCTCACCAGCGAGTGATGGGGAAAGCCTTTGATGACCGCCTCGGTTGCTATCTGCTGGTGACGTTACTGCGCGAACTGCACGACGCCGAACTACCTGCGGAAGTGTGGCTGGTGGCAAGTTCCAGCGAAGAGGTGGGATTACGCGGCGGGCAAACTGCCACCCGCGCGGTGTCGCCGGACGTCGCCATTGTGCTTGATACCGCCTGCTGGGCGAAAAACTTTGATTATGGCGCGGCTAACCATCGCCAGATTGGTAACGGGCCGATGCTGGTGTTAAGCGACAAGTCGCTGATTGCGCCGCCAAAACTTACCGCCTGGGTCGAAACCGTGGCGGCAGAAATTGGCGTGCCGTTGCAGGCAGATATGTTCAGCAACGGCGGCACGGACGGCGGGGCGGTGCACTTAACCGGCACCGGCGTGCCCACAGTGGTGATGGGGCCAGCAACCCGCCATGGACATTGCGCCGCATCGATTGCCGATTGCCGCGACATTTTGCAGATGCAGCAACTTTTATCTGCCCTTATTCAACGTCTTACGCGTGAGACGGTTGTTCAACTGACGGATTTCAGATGA", + "dna_sequence_length": 1038, + "functions": [ + "aminopeptidase" + ], + "id": "CDS_2370", + "location": [ + [ + "NC_000913", + 2505547, + "-", + 1038 + ] + ], + "md5": "68b43d84f02536cda7bf83e2ed2aad28", + "parent_gene": "", + "protein_md5": "176aaf7d445abb94a9a16fda6a9386c9", + "protein_translation": "MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRLTRETVVQLTDFR", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007869" + ], + [ + "gene_synonym", + "ECK2381" + ], + [ + "gene_synonym", + "EcoGene:EG14153" + ], + [ + "gene_synonym", + "GI:16130317" + ], + [ + "gene_synonym", + "GeneID:946853" + ], + [ + "gene_synonym", + "JW2382" + ], + [ + "gene_synonym", + "NP_416886.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76524" + ], + [ + "gene_synonym", + "b2385" + ], + [ + "gene_synonym", + "ypdF" + ] + ], + "dna_sequence": "ATGACATTACTCGCTTCGCTGCGCGACTGGCTTAAGGCGCAACAACTGGATGCAGTGCTTCTCTCCTCACGGCAGAACAAACAGCCGCATCTGGGGATCTCCACCGGATCAGGTTATGTGGTGATTAGCCGTGAAAGTGCGCACATTCTGGTGGATTCGCGCTATTACGTTGAGGTGGAAGCCCGTGCGCAAGGCTACCAGCTGCATTTGCTTGACGCGACGAACACGCTTACCACTATCGTCAATCAAATCATTGCCGATGAACAGTTGCAAACGCTCGGTTTTGAGGGCCAGCAGGTGAGTTGGGAAACCGCGCACCGCTGGCAGTCTGAACTCAATGCGAAACTGGTTAGCGCCACGCCGGATGTGCTGCGGCAAATCAAAACGCCAGAGGAGGTGGAGAAAATCCGCCTCGCCTGTGGGATTGCTGATCGCGGTGCAGAGCATATTCGCCGCTTTATTCAGGCGGGGATGAGCGAGCGCGAGATAGCCGCTGAACTGGAGTGGTTTATGCGCCAGCAGGGCGCAGAAAAAGCCTCTTTTGACACCATTGTCGCCAGTGGCTGGCGTGGGGCGCTGCCGCACGGCAAAGCCAGCGACAAGATTGTTGCAGCGGGCGAGTTTGTCACTCTCGATTTCGGTGCGCTGTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATTTCGGTCATAACACCGGTCACGCTATCGGCATTGAAGTTCATGAAGATCCGCGTTTTTCACCGCGGGACACCACGACGCTACAGCCAGGCATGTTACTGACCGTGGAGCCGGGGATTTATTTGCCAGGGCAAGGGGGCGTGCGCATCGAAGATGTTGTGCTGGTTACCCCGCAAGGCGCAGAAGTGCTCTACGCCATGCCGAAAACAGTGTTGCTCACGGGAGAGGCATAA", + "dna_sequence_length": 1086, + "functions": [ + "Xaa-Pro aminopeptidase" + ], + "id": "CDS_2371", + "location": [ + [ + "NC_000913", + 2506632, + "-", + 1086 + ] + ], + "md5": "78abff806e4594e4be424208dea94815", + "parent_gene": "", + "protein_md5": "c50d78260613034cae969ee7117277cd", + "protein_translation": "MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISRESAHILVDSRYYVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELNAKLVSATPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHLLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQGAEVLYAMPKTVLLTGEA", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007871" + ], + [ + "gene_synonym", + "ECK2382" + ], + [ + "gene_synonym", + "EcoGene:EG14154" + ], + [ + "gene_synonym", + "GI:16130318" + ], + [ + "gene_synonym", + "GeneID:949111" + ], + [ + "gene_synonym", + "JW2383" + ], + [ + "gene_synonym", + "NP_416887.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77579" + ], + [ + "gene_synonym", + "b2386" + ], + [ + "gene_synonym", + "fryC" + ], + [ + "gene_synonym", + "ypdG" + ] + ], + "dna_sequence": "ATGGCCATTAAAAAACGCAGTGCAACCGTTGTGCCTGGCGCATCCGGTGCGGCAGCGGCAGTTAAGAATCCGCAGGCCTCTAAAACCAGCTTCTGGGGTGAACTCCCGCAGCATGTGATGTCAGGGATTTCACGCATGGTGCCGACCTTAATTATGGGCGGTGTGATCCTCGCTTTCAGCCAGCTGATTGCTTATAGCTGGCTTAAAATTCCTGCTGAGATCGGCATCATGGATGCTCTTAATAGCGGGAAATTCTCCGGTTTCGACCTCTCCTTACTTAAATTTGCCTGGCTGTCGCAGTCCTTCGGCGGCGTGTTGTTTGGTTTTGCCATTCCGATGTTTGCTGCTTTTGTGGCGAACTCTATCGGTGGCAAACTGGCGTTCCCGGCTGGTTTTATCGGCGGGTTGATGTCTACCCAGCCGACGCAACTGCTGAACTTCGATCCCAGCACTATGCAATGGGCGACCTCTTCGCCGGTGCCGTCCACCTTCATTGGTGCGCTGATTATTTCTATCGTTGCCGGTTACCTTGTGAAGTGGATGAACCAGAAAATCCAGTTACCGGATTTCCTGTTAGCGTTCAAAACCACATTTTTGCTCCCGATTCTTTCCGCCATTTTTGTCATGCTGGCGATGTACTACGTCATCACCCCCTTTGGTGGCTGGATCAACGGCGGTATCCGTACTGTGCTGACTGCCGCAGGTGAGAAGGGCGCGCTGATGTACGCAATGGGGATCGCCGCGGCGACAGCAATCGACCTTGGTGGCCCGATCAACAAAGCCGCAGGTTTTGTTGCCTTCAGCTTTACCACTGACCACGTATTACCGGTCACCGCTCGTTCTATCGCTATCGTTATTCCGCCGATTGGTCTGGGGCTGGCGACCATTATCGACCGTCGTTTAACCGGCAAACGCCTGTTCAACGCTCAACTTTATCCGCAGGGTAAGACCGCCATGTTCCTGGCGTTTATGGGGATCAGTGAGGGTGCGATTCCGTTTGCGCTGGAAAGCCCCATCACCGCCATTCCGTCGTATATGGTCGGCGCTATTGTCGGCTCAACCGCCGCTGTCTGGCTGGGCGCAGTGCAATGGTTCCCGGAGTCCGCTATCTGGGCATGGCCGCTGGTCACTAACCTGGGCGTCTATATGGCGGGGATCGCGCTGGGGGCAGTCATAACTGCGCTGATGGTGGTGTTCCTGCGTCTGATGATGTTCCGTAAAGGCAAATTGTTAATCGATAGCCTGTAA", + "dna_sequence_length": 1248, + "functions": [ + "putative enzyme IIC component of PTS" + ], + "id": "CDS_2372", + "location": [ + [ + "NC_000913", + 2507894, + "-", + 1248 + ] + ], + "md5": "5fbaa819b0bd8028cccbe6b4c251632e", + "parent_gene": "", + "protein_md5": "36a73a61f0358e2200cbfc41b35bd78e", + "protein_translation": "MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007873" + ], + [ + "gene_synonym", + "ECK2383" + ], + [ + "gene_synonym", + "EcoGene:EG14155" + ], + [ + "gene_synonym", + "GI:16130319" + ], + [ + "gene_synonym", + "GeneID:949087" + ], + [ + "gene_synonym", + "JW5389" + ], + [ + "gene_synonym", + "NP_416888.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69808" + ], + [ + "gene_synonym", + "b2387" + ], + [ + "gene_synonym", + "fryB" + ], + [ + "gene_synonym", + "ypdH" + ] + ], + "dna_sequence": "ATGAGTAAGAAACTGATTGCCTTATGTGCCTGCCCGATGGGCCTGGCTCACACCTTTATGGCCGCTCAGGCGCTGGAAGAAGCGGCGGTAGAAGCCGGTTATGAAGTGAAAATTGAAACCCAGGGCGCGGACGGTATCCAGAATCGCCTGACGGCGCAGGATATCGCCGAAGCGACCATCATCATCCACTCCGTGGCAGTTACCCCGGAAGATAACGAACGTTTCGAATCACGCGACGTTTATGAAATCACTTTGCAGGACGCAATTAAAAACGCTGCGGGCATCATCAAAGAAATCGAAGAGATGATTGCCTCTGAACAACAGTAA", + "dna_sequence_length": 327, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_2373", + "location": [ + [ + "NC_000913", + 2508242, + "-", + 327 + ] + ], + "md5": "06289b078ea846a988bb419ef7e740cf", + "parent_gene": "", + "protein_md5": "ffdb15eded2cbc4a89b6e9ece42b30e9", + "protein_translation": "MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007875" + ], + [ + "gene_synonym", + "ECK2384" + ], + [ + "gene_synonym", + "EcoGene:EG12957" + ], + [ + "gene_synonym", + "GI:16130320" + ], + [ + "gene_synonym", + "GeneID:946858" + ], + [ + "gene_synonym", + "JW2385" + ], + [ + "gene_synonym", + "NP_416889.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6V8" + ], + [ + "gene_synonym", + "b2388" + ], + [ + "gene_synonym", + "glk" + ] + ], + "dna_sequence": "ATGACAAAGTATGCATTAGTCGGTGATGTGGGCGGCACCAACGCACGTCTTGCTCTGTGTGATATTGCCAGTGGTGAAATCTCGCAGGCTAAGACCTATTCAGGGCTTGATTACCCCAGCCTCGAAGCGGTCATTCGCGTTTATCTTGAAGAACATAAGGTCGAGGTGAAAGACGGCTGTATTGCCATCGCTTGCCCAATTACCGGTGACTGGGTGGCGATGACCAACCATACCTGGGCGTTCTCAATTGCCGAAATGAAAAAGAATCTCGGTTTTAGCCATCTGGAAATTATTAACGATTTTACCGCTGTATCGATGGCGATCCCGATGCTGAAAAAAGAGCATCTGATTCAGTTTGGTGGCGCAGAACCGGTCGAAGGTAAGCCTATTGCGGTTTACGGTGCCGGAACGGGGCTTGGGGTTGCGCATCTGGTCCATGTCGATAAGCGTTGGGTAAGCTTGCCAGGCGAAGGCGGTCACGTTGATTTTGCGCCGAATAGTGAAGAAGAGGCCATTATCCTCGAAATATTGCGTGCGGAAATTGGTCATGTTTCGGCGGAGCGCGTGCTTTCTGGCCCTGGGCTGGTGAATTTGTATCGCGCAATTGTGAAAGCTGACAACCGCCTGCCAGAAAATCTCAAGCCAAAAGATATTACCGAACGCGCGCTGGCTGACAGCTGCACCGATTGCCGCCGCGCATTGTCGCTGTTTTGCGTCATTATGGGCCGTTTTGGCGGCAATCTGGCGCTCAATCTCGGGACATTTGGCGGCGTGTTTATTGCGGGCGGTATCGTGCCGCGCTTCCTTGAGTTCTTCAAAGCCTCCGGTTTCCGTGCCGCATTTGAAGATAAAGGGCGCTTTAAAGAATATGTCCATGATATTCCGGTGTATCTCATCGTCCATGACAATCCGGGCCTTCTCGGTTCCGGTGCACATTTACGCCAGACCTTAGGTCACATTCTGTAA", + "dna_sequence_length": 966, + "functions": [ + "glucokinase" + ], + "id": "CDS_2374", + "location": [ + [ + "NC_000913", + 2509426, + "-", + 966 + ] + ], + "md5": "d05d20f5ed0b34e2d1be832f646147a4", + "parent_gene": "", + "protein_md5": "33b4c0cf74a0325ea1d3086af7ba8f90", + "protein_translation": "MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007880" + ], + [ + "gene_synonym", + "ECK2385" + ], + [ + "gene_synonym", + "EcoGene:EG14156" + ], + [ + "gene_synonym", + "GI:16130321" + ], + [ + "gene_synonym", + "GeneID:946854" + ], + [ + "gene_synonym", + "JW2386" + ], + [ + "gene_synonym", + "NP_416890.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67729" + ], + [ + "gene_synonym", + "b2389" + ], + [ + "gene_synonym", + "yfeO" + ] + ], + "dna_sequence": "ATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGTGGCAATTGGGATTGCGTCCAGTCTTATTCTGATTGTGGTGATGAAAATCGCCTCGGTATTACAGAATTTGCTCTGGCAACGACTGCCGGGAACTCTGGGGATAGCCCAGGATTCACCCCTCTGGATCATCGGTGTATTAACGCTAACGGGTATTGCGGTGGGGTTGGTTATCCGTTTCAGCCAGGGTCATGCCGGACCAGACCCCGCCTGTGAACCGCTGATCGGCGCACCGGTTCCGCCCTCTGCGCTACCTGGACTTATCGTAGCATTAATTCTCGGTCTTGCTGGCGGCGTCAGCCTGGGGCCGGAACATCCGATCATGACCGTCAATATCGCCCTTGCGGTTGCCATTGGCGCTCGTCTGTTACCGCGCGTCAACCGAATGGAGTGGACTATTTTAGCCTCTGCCGGAACCATCGGCGCACTGTTTGGCACTCCTGTTGCGGCGGCGTTGATATTTTCGCAAACCTTAAATGGCAGTAGTGAAGTTCCGCTATGGGATCGTCTCTTTGCGCCGTTAATGGCGGCAGCAGCTGGTGCACTTACTACCGGATTATTTTTCCATCCTCATTTTTCACTGCCCATTGCTCATTACGGACAGATGGAAATGACCGATATTCTCAGCGGTGCAATTGTCGCGGCGATTGCCATCGCAGCAGGGATGGTCGCCGTATGGTGCTTACCACGGTTGCACGCGATGATGCATCAAATGAAAAATCCGGTGCTCGTGCTGGGTATTGGCGGATTTATTCTCGGTATTCTGGGGGTTATTGGTGGACCAGTTTCGCTGTTTAAAGGGCTGGATGAGATGCAGCAGATGGTGGCAAATCAGGCTTTCAGCACCAGCGATTACTTTTTGCTGGCGGTAATTAAACTTGCCGCCCTGGTCGTTGCTGCCGCCAGTGGCTTTCGCGGTGGGCGAATCTTCCCGGCAGTGTTTGTCGGCGTGGCATTAGGGTTGATGCTGCATGAGCACGTTCCCGCCGTACCAGCGGCAATAACCGTTTCTTGCGCTATTCTCGGCATCGTGCTGGTGGTAACACGCGATGGCTGGTTAAGTCTTTTTATGGCGGCAGTCGTTGTACCCAATACCACATTGCTACCGCTGCTCTGTATCGTCATGCTTCCGGCATGGCTGTTATTAGCAGGTAAGCCGATGATGATGGTCAATCGTCCGAAGCAACAGCCACCCCACGATAACGTTTAG", + "dna_sequence_length": 1257, + "functions": [ + "putative ion channel protein" + ], + "id": "CDS_2375", + "location": [ + [ + "NC_000913", + 2509630, + "+", + 1257 + ] + ], + "md5": "194ad759a4d36f5820e6d770f30df14c", + "parent_gene": "", + "protein_md5": "2715e396f04256e3c02525755a44a328", + "protein_translation": "MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQRLPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPGLIVALILGLAGGVSLGPEHPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALFGTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQMEMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMHQMKNPVLVLGIGGFILGILGVIGGPVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVALGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVMLPAWLLLAGKPMMMVNRPKQQPPHDNV", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007883" + ], + [ + "gene_synonym", + "ECK2386" + ], + [ + "gene_synonym", + "EcoGene:EG14385" + ], + [ + "gene_synonym", + "GI:16130322" + ], + [ + "gene_synonym", + "GeneID:946855" + ], + [ + "gene_synonym", + "JW2387" + ], + [ + "gene_synonym", + "NP_416891.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64542" + ], + [ + "gene_synonym", + "b2390" + ], + [ + "gene_synonym", + "ypeC" + ] + ], + "dna_sequence": "ATGTTCAGGTCACTGTTTCTGGCGGCCGCCCTGATGGCATTTACCCCGCTTGCAGCAAACGCAGGTGAAATCACCCTACTGCCATCAATCAAATTACAAATTGGCGATCGCGATCATTACGGTAATTACTGGGACGGTGGTCACTGGCGCGACCGTGACTACTGGCATCGCAATTATGAGTGGCGCAAAAACCGTTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAA", + "dna_sequence_length": 327, + "functions": [ + "DUF2502 family putative periplasmic protein" + ], + "id": "CDS_2376", + "location": [ + [ + "NC_000913", + 2511001, + "+", + 327 + ] + ], + "md5": "ac60b5ed3c6cc2f127df6836155f39a8", + "parent_gene": "", + "protein_md5": "46b03e93eba98dbcb2c9463dcc4d52a9", + "protein_translation": "MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007889" + ], + [ + "gene_synonym", + "ECK2387" + ], + [ + "gene_synonym", + "EcoGene:EG14157" + ], + [ + "gene_synonym", + "GI:16130324" + ], + [ + "gene_synonym", + "GeneID:946899" + ], + [ + "gene_synonym", + "JW2388" + ], + [ + "gene_synonym", + "NP_416893.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A769" + ], + [ + "gene_synonym", + "b2392" + ], + [ + "gene_synonym", + "mntA" + ], + [ + "gene_synonym", + "mntH" + ], + [ + "gene_synonym", + "yfeP" + ] + ], + "dna_sequence": "ATGACGAACTATCGCGTTGAGAGTAGCAGCGGACGGGCGGCGCGCAAGATGAGGCTCGCATTAATGGGACCTGCGTTCATTGCGGCGATTGGTTATATCGATCCCGGTAACTTTGCGACCAATATTCAGGCGGGTGCTAGCTTCGGCTATCAGCTACTGTGGGTTGTCGTTTGGGCCAACCTGATGGCGATGCTGATTCAGATCCTCTCTGCCAAACTAGGGATTGCCACCGGTAAAAATCTGGCGGAGCAGATTCGCGATCACTATCCGCGTCCCGTAGTGTGGTTCTATTGGGTTCAGGCAGAAATTATTGCGATGGCAACCGACCTGGCGGAATTTATTGGTGCGGCGATCGGTTTTAAACTCATTCTTGGTGTTTCGTTGTTGCAGGGCGCGGTGCTGACGGGGATCGCGACTTTCCTGATTTTAATGCTGCAACGTCGCGGGCAAAAACCGCTGGAGAAAGTGATTGGCGGGTTACTGTTGTTTGTTGCCGCGGCTTACATTGTCGAGTTGATTTTCTCCCAGCCTAACCTGGCGCAGCTGGGTAAAGGAATGGTGATCCCGAGTTTACCTACTTCGGAAGCGGTCTTCCTGGCAGCAGGCGTGTTAGGGGCGACGATTATGCCGCATGTGATTTATTTGCACTCCTCGCTCACTCAGCATTTACATGGCGGTTCGCGTCAACAACGTTATTCCGCCACCAAATGGGATGTGGCTATCGCCATGACTATTGCCGGTTTTGTCAATCTGGCGATGATGGCTACAGCTGCGGCGGCGTTCCACTTTTCCGGTCATACTGGTGTTGCCGATCTTGATGAGGCTTATCTGACGCTGCAACCGCTGTTAAGCCACGCTGCGGCAACGGTCTTTGGATTAAGCCTGGTTGCTGCGGGGCTGTCTTCAACGGTGGTGGGGACACTGGCGGGGCAGGTGGTGATGCAGGGCTTCATTCGCTTTCATATCCCGCTGTGGGTGCGTCGTACAGTCACCATGTTGCCGTCATTTATTGTCATTCTGATGGGATTAGATCCGACACGGATTCTGGTTATGAGTCAGGTACTGTTAAGTTTTGGTATCGCTCTGGCGCTGGTTCCACTGCTGATTTTCACCAGTGACAGCAAGTTGATGGGCGATCTGGTGAACAGCAAACGCGTAAAACAGACAGGCTGGGTGATTGTGGTGCTGGTCGTGGCGCTGAATATCTGGTTGTTGGTGGGGACGGCGCTGGGATTGTAG", + "dna_sequence_length": 1239, + "functions": [ + "manganese/divalent cation transporter" + ], + "id": "CDS_2377", + "location": [ + [ + "NC_000913", + 2512706, + "-", + 1239 + ] + ], + "md5": "0bc18d4de9732006dbfaa0cd71e4288f", + "parent_gene": "", + "protein_md5": "c2e754c9a91b75c862fef2772e28db8c", + "protein_translation": "MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007893" + ], + [ + "gene_synonym", + "ECK2388" + ], + [ + "gene_synonym", + "EcoGene:EG11971" + ], + [ + "gene_synonym", + "GI:16130325" + ], + [ + "gene_synonym", + "GeneID:946895" + ], + [ + "gene_synonym", + "JW2389" + ], + [ + "gene_synonym", + "NP_416894.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF2" + ], + [ + "gene_synonym", + "b2393" + ], + [ + "gene_synonym", + "cru" + ], + [ + "gene_synonym", + "nupC" + ] + ], + "dna_sequence": "ATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCAAAAAAATTCGTATCCGTTATGTTATTCAACTGCTTGTTATCGAAGTGTTACTGGCGTGGTTCTTCCTGAACTCCGACGTTGGTTTAGGCTTCGTGAAAGGCTTCTCCGAAATGTTCGAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCAAAGTCAACGGCATGGGCAAACTGGAATCCTTTAACGCCGTCAGCTCCCTGATTCTGGGTCAGTCTGAAAACTTTATTGCCTATAAAGATATCCTCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAGGTTTCAAAGTTGCCATTATCGTTGCCGCGATGCTGATTGGCTTTATCGCCCTGATCGCCGCGCTGAACGCACTGTTTGCCACCGTTACTGGCTGGTTTGGCTACAGCATCTCCTTCCAGGGCATCCTGGGCTACATCTTCTATCCGATTGCATGGGTGATGGGTGTTCCTTCCAGTGAAGCACTGCAAGTGGGCAGTATCATGGCGACCAAACTGGTTTCCAACGAGTTCGTTGCGATGATGGATCTGCAGAAAATTGCTTCCACGCTCTCTCCGCGTGCTGAAGGCATCATCTCTGTGTTCCTGGTTTCCTTCGCTAACTTCTCTTCAATCGGGATTATCGCAGGTGCAGTTAAAGGCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAA", + "dna_sequence_length": 1203, + "functions": [ + "nucleoside (except guanosine) transporter" + ], + "id": "CDS_2378", + "location": [ + [ + "NC_000913", + 2513042, + "+", + 1203 + ] + ], + "md5": "3f5d7cc86313a8e7bb9314b025d23a64", + "parent_gene": "", + "protein_md5": "7ef397182a8bc6505c911d9ccddd495e", + "protein_translation": "MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007897" + ], + [ + "gene_synonym", + "ECK0016" + ], + [ + "gene_synonym", + "EcoGene:EG40012" + ], + [ + "gene_synonym", + "GI:90111427" + ], + [ + "gene_synonym", + "GeneID:946896" + ], + [ + "gene_synonym", + "NP_416895.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF93" + ], + [ + "gene_synonym", + "b2394" + ], + [ + "gene_synonym", + "insL1" + ] + ], + "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", + "dna_sequence_length": 1113, + "functions": [ + "IS186 transposase" + ], + "id": "CDS_2379", + "location": [ + [ + "NC_000913", + 2514331, + "+", + 1113 + ] + ], + "md5": "3fce9c70c9584709b648ad88256d7bb8", + "parent_gene": "", + "protein_md5": "4dc27d1a21f12988eb2f603aa2b9828d", + "protein_translation": "MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN", + "protein_translation_length": 370, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007899" + ], + [ + "gene_synonym", + "ECK2389" + ], + [ + "gene_synonym", + "EcoGene:EG11145" + ], + [ + "gene_synonym", + "GI:90111428" + ], + [ + "gene_synonym", + "GeneID:946864" + ], + [ + "gene_synonym", + "JW5391" + ], + [ + "gene_synonym", + "NP_416896.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23842" + ], + [ + "gene_synonym", + "b2395" + ], + [ + "gene_synonym", + "yfeA" + ] + ], + "dna_sequence": "ATGTTTGTGGAGCATAACCTGATAAAAAATATCAAGATATTCACACTAGCGTTTACGCTCACCGTGGTACTTATTCAGCTATCCCGTTTTATTTCGCCACTTGCCATTATCCATTCCAGTTATATCTTTCTGGCGTGGATGCCACTGTGCGTAATGCTGTCAATCTTGTTTATCTTTGGCTGGCGCGGTGTCGTTCCCGTTTTATGCGGGATGTTTTGCACCAATCTGTGGAACTTTCATCTCTCTTTTTTACAGACTGCGGTCATGCTCGGTAGCCAGACGTTTGTCGTGTTGTGTGCCTGCGCAATATTACGCTGGCAGCTGGGGACGCGTTGGCGTTATGGATTGACCAGCCGATATGTCTGGCAACGTCTGTTCTGGCTTGGTTTGGTGACGCCGATCGGCATCAAATGCAGCATGTATCTTGTGGGGAGCTTCTTTGATTTCCCGCTAAAGATATCCACCTTTTTCGGCGATGCGGATGCCATTTTCACGGTCGTTGATTTGCTAAGCCTTTTCACCGCTGTGCTGATTTACAACATGCTTTTCTACTATCTCACTCGCATGATTGTAAGTCCCCACTTTGCGCAGATATTGTGGCGCAGGGATATCGCTCCGTCGTTGGGCAAAGAGAAACGCGCATTTACCTTAAGCTGGCTGGCAGCGTTAAGCGTGCTGCTACTTCTGTTGTGCACACCTTATGAAAACGACTTTATTGCCGGTTACCTGGTACCCGTTTTCTTCATCATCTTTACCCTCGGGGTCGGTAAGCTTCGCTATCCGTTTTTAAATCTCACCTGGGCTGTTTCAACGCTTTGCCTTCTGAATTACAACCAGAACTTTTTGCAAGGGGTGGAAACCGAATATTCGCTGGCATTTATTCTTGCGGTGCTGATTTCCTTTAGCGTTTGCCTGCTCTATATGGTGCGCATTTATCATCGCAGTGAATGGCTTAATCGCCGCTGGCATTTGCAGGCGCTGACAGATCCGTTAACGCTCCTACCCAACTTTCGTGCGTTGGAACAAGCGCCGGAGCAAGAGGCGGGCAAGAGTTTTTGCTGCCTGCGCATTGATAATCTTGAGTTTATGAGTCGTCATTACGGCTTAATGATGCGCGTTCACTGTATCCGCTCAATTTGCCGTACGCTGCTGCCGTTGATGCAGGAAAACGAAAAGTTGTATCAATTGCCGGGTAGTGAACTGCTGTTAGTGCTGAGCGGGCCGGAAACGGAAGGGCGACTCCAGCATATGGTTAACATCCTGAATAGTCGGCAAATTCACTGGAACAATACCGGGCTGGATATGGGCTATGGTGCTGCCTGGGGGCGTTTTGATGGAAATCAGGAAACCCTGCAACCCTTGTTGGGGCAGTTAAGCTGGCTGGCGGAGCAATCCTGCGCACATCATCATGTGCTGGCGCTGGATAGCAGAGAGGAGATGGTTTCCGGGCAGACCACTAAACAGGTGCTATTGCTGAATACCATTCGCACGGCGTTAGATCAGGGTGATTTGCTGCTCTACGCCCAGCCAATTCGCAACAAAGAGGGTGAAGGTTATGATGAGATCCTCGCGCGACTGAAATATGACGGCGGCATTATGACCCCGGATAAGTTTCTGCCCCTTATTGCTCAGTTTAACCTTAGCGCGCGTTTTGATTTGCAAGTGCTGGAATCCTTGTTGAAGTGGCTGGCAACACACCCTTGCGACAAAAAAGGACCGCGCTTTTCAGTCAATTTAATGCCGCTCACGCTGCTGCAAAAGAATATTGCCGGGCGGATTATTCGTCTGTTTAAGCGTTATCACATCTCCCCGCAGGCGGTCATTCTTGAGATCACCGAGGAGCAGGCGTTTTCTAACGCAGAAAGCAGCATGTACAACATCGAGCAGCTGCATAAGTTTGGTTTCCGGATTGCGATTGATGACTTTGGCACCGGATATGCCAACTACGAACGGTTAAAGCGTTTGCAGGCTGATATCATCAAAATTGATGGCGTCTTTGTGAAAGATATTGTCACGAACACGCTGGATGCGATGATTGTGAGATCAATTACCGATCTGGCGAAAGCGAAGTCATTGAGTGTGGTCGCGGAGTTTGTCGAGACGCAACAGCAGCAGGCGCTATTGCATAAGCTCGGGGTGCAATATCTGCAAGGGTATTTGATTGGTCGCCCGCAGCCATTAGCTGATTAA", + "dna_sequence_length": 2190, + "functions": [ + "putative diguanylate cyclase" + ], + "id": "CDS_2380", + "location": [ + [ + "NC_000913", + 2517832, + "-", + 2190 + ] + ], + "md5": "a0a801c81b5611dc0c00e307a48a8d85", + "parent_gene": "", + "protein_md5": "34bac47bb8e48c1aa969bed438c73a36", + "protein_translation": "MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD", + "protein_translation_length": 729, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007907" + ], + [ + "gene_synonym", + "ECK2392" + ], + [ + "gene_synonym", + "EcoGene:EG11431" + ], + [ + "gene_synonym", + "GI:90111429" + ], + [ + "gene_synonym", + "GeneID:946857" + ], + [ + "gene_synonym", + "JW2393" + ], + [ + "gene_synonym", + "NP_416897.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD37" + ], + [ + "gene_synonym", + "b2398" + ], + [ + "gene_synonym", + "yfeC" + ] + ], + "dna_sequence": "ATGACACCAGATGAACTTGCCAGACTGACCGGCTATAGCCGCCAGACCATTAATAAATGGGTACGCAAGGAAGGCTGGACAACGTCACCAAAACCTGGCGTCCAGGGTGGCAAAGCCCGACTGGTTCACGTCAATGAACAGGTTCGTGAATATATTCGCAATGCTGAACGTCCAGAAGGTCAGGGAGAAGCGCCTGCCCTTTCTGGTGATGCGCCGCTTGAAGTATTGCTGGTGACACTGGCGAAAGAGATGACGCCAGTTGAACAAAAACAGTTTACATCCTTGCTTCTGCGGGAAGGGATTATCGGATTGTTACAACGCTTAGGGATTCGCGATAGCAAATAA", + "dna_sequence_length": 345, + "functions": [ + "DUF1323 family putative DNA-binding protein" + ], + "id": "CDS_2381", + "location": [ + [ + "NC_000913", + 2518467, + "+", + 345 + ] + ], + "md5": "2f045538fc5360a4f6afa0ce07566d55", + "parent_gene": "", + "protein_md5": "4cc6367ba3526a3be10334ec7067599c", + "protein_translation": "MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007909" + ], + [ + "gene_synonym", + "ECK2393" + ], + [ + "gene_synonym", + "EcoGene:EG11432" + ], + [ + "gene_synonym", + "GI:226524736" + ], + [ + "gene_synonym", + "GeneID:946865" + ], + [ + "gene_synonym", + "JW2394" + ], + [ + "gene_synonym", + "NP_416898.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27238" + ], + [ + "gene_synonym", + "b2399" + ], + [ + "gene_synonym", + "yfeD" + ] + ], + "dna_sequence": "ATGAAAAGATTACGCAATAAAATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTTGGATCAGAGAAAAAGGCTGGAAAACGGAAAAATTTCCCGGCGTGAAAGGCGGTCGTGCCAGACTTATTCTGGTCGATACGCAAGTTTGCGAGTTTATTCAGAACACGCCAGCCTTCCATAACACACCAATGTTGATGGAAGCTGAAGAGAGAATTGCTGAATACGCTCCTGGAGCACGCGCCCCGGCGTATCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTCACGTGAAGGAATTCGCAATTTCCTCGCCCGTCTCGATATTGACGAATCAGCATAA", + "dna_sequence_length": 393, + "functions": [ + "DUF1323 family putative DNA-binding protein" + ], + "id": "CDS_2382", + "location": [ + [ + "NC_000913", + 2518813, + "+", + 393 + ] + ], + "md5": "a07c7f22be6fb2bac4be9416377a63c1", + "parent_gene": "", + "protein_md5": "41032b04170ea48fed1e6276d5892a37", + "protein_translation": "MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007911" + ], + [ + "gene_synonym", + "ECK2394" + ], + [ + "gene_synonym", + "EcoGene:EG10407" + ], + [ + "gene_synonym", + "GI:16130330" + ], + [ + "gene_synonym", + "GeneID:946906" + ], + [ + "gene_synonym", + "JW2395" + ], + [ + "gene_synonym", + "NP_416899.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04805" + ], + [ + "gene_synonym", + "b2400" + ], + [ + "gene_synonym", + "gltX" + ] + ], + "dna_sequence": "ATGAAAATCAAAACTCGCTTCGCGCCAAGCCCAACAGGCTATCTGCACGTTGGCGGCGCGCGTACTGCTCTTTACTCCTGGCTTTTTGCACGTAACCACGGCGGTGAGTTCGTGCTGCGTATTGAAGACACCGATCTTGAGCGTTCCACGCCGGAAGCTATCGAAGCCATTATGGATGGCATGAACTGGCTGAGCCTGGAGTGGGATGAAGGTCCGTACTACCAGACCAAACGTTTTGATCGCTACAACGCGGTGATCGATCAGATGCTGGAAGAGGGCACTGCTTATAAATGCTATTGCTCTAAAGAGCGCCTGGAAGCGCTGCGCGAAGAGCAAATGGCGAAAGGTGAGAAGCCGCGTTATGACGGTCGCTGCCGCCACAGCCATGAGCATCATGCTGATGATGAACCGTGTGTTGTACGTTTTGCTAACCCGCAGGAAGGTTCTGTTGTTTTTGACGATCAGATCCGTGGTCCGATCGAGTTCAGCAACCAGGAACTGGACGATCTTATTATCCGCCGTACCGATGGTTCCCCAACCTATAACTTCTGTGTGGTTGTCGATGACTGGGATATGGAAATCACCCACGTTATCCGTGGCGAAGACCATATCAACAACACGCCACGCCAGATCAACATTCTTAAGGCCCTGAAAGCGCCGGTGCCGGTTTACGCGCACGTTTCTATGATCAATGGCGATGACGGTAAAAAACTGTCCAAACGTCACGGGGCAGTCAGCGTAATGCAGTATCGTGATGACGGTTATTTGCCAGAAGCACTGCTGAACTATCTGGTGCGTCTGGGCTGGTCCCACGGCGATCAGGAAATCTTCACTCGTGAAGAGATGATCAAATACTTCACTTTGAATGCCGTCAGCAAATCTGCCAGTGCGTTCAACACCGACAAGCTGCTGTGGCTGAACCATCACTACATTAACGCGCTGCCGCCGGAGTATGTTGCTACTCACTTACAGTGGCACATTGAGCAGGAAAATATCGATACCCGTAACGGCCCGCAGCTGGCTGATCTGGTGAAACTGCTGGGCGAACGCTGCAAGACGCTGAAAGAGATGGCACAGAGCTGCCGTTATTTCTACGAAGATTTTGCTGAGTTCGATGCCGACGCCGCGAAAAAACATCTGCGTCCGGTAGCGCGTCAGCCGCTGGAAGTGGTTCGTGACAAACTGGCCGCGATTACTGACTGGACCGCTGAAAACGTTCATCACGCTATTCAGGCGACGGCGGATGAGCTGGAAGTGGGTATGGGTAAAGTTGGTATGCCGCTGCGTGTCGCCGTAACCGGTGCGGGGCAGTCTCCAGCACTGGATGTTACCGTTCACGCAATTGGTAAGACCCGCAGTATCGAGCGTATCAACAAAGCGCTGGATTTTATTGCTGAACGCGAAAATCAGCAGTAA", + "dna_sequence_length": 1416, + "functions": [ + "glutamyl-tRNA synthetase" + ], + "id": "CDS_2383", + "location": [ + [ + "NC_000913", + 2520672, + "-", + 1416 + ] + ], + "md5": "994b057934f377c0c080df21723c9c35", + "parent_gene": "", + "protein_md5": "3823599bbfe6a544c24c6b0b0820909c", + "protein_translation": "MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDTRNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGKTRSIERINKALDFIAERENQQ", + "protein_translation_length": 471, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007922" + ], + [ + "gene_synonym", + "ECK2399" + ], + [ + "gene_synonym", + "EcoGene:EG11146" + ], + [ + "gene_synonym", + "GI:16130331" + ], + [ + "gene_synonym", + "GeneID:946862" + ], + [ + "gene_synonym", + "JW2396" + ], + [ + "gene_synonym", + "NP_416900.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23841" + ], + [ + "gene_synonym", + "b2405" + ], + [ + "gene_synonym", + "pRndR" + ], + [ + "gene_synonym", + "xapR" + ], + [ + "gene_synonym", + "yfeB" + ] + ], + "dna_sequence": "ATGGAACGCGTATACAGAACAGATCTTAAGTTGCTCCGTTATTTTCTTGCCGTAGCGGAAGAGTTGCATTTTGGCCGCGCAGCAGCGCGTTTAAATATGTCTCAGCCTCCGCTCAGCATTCATATTAAAGAGCTGGAAAATCAACTCGGCACGCAGCTTTTTATTCGCCATTCGCGCAGCGTCGTACTGACACACGCGGGCAAAATCTTGATGGAAGAATCGCGTCGATTGCTGGTGAATGCTAATAATGTATTGGCTCGGATTGAACAAATAGGTCGGGGAGAAGCAGGGCGGATTGAACTCGGCGTAGTGGGAACGGCAATGTGGGGACGGATGCGCCCGGTTATGCGGCGATTCCTCAGGGAAAATCCTAACGTTGACGTTCTTTTTCGCGAAAAGATGCCCGCGATGCAAATGGCCTTGCTGGAACGCCGCGAACTTGATGCCGGGATCTGGCGAATGGCGACAGAACCACCGACTGGTTTTACCAGCTTACGGTTGCATGAATCGGCGTTTCTGGTGGCGATGCCTGAAGAGCATCATCTCTCATCATTTTCCACCGTCCCGCTGGAAGCGCTACGTGACGAGTATTTTGTTACAATGCCGCCCGTTTACACTGACTGGGATTTTTTGCAGCGAGTTTGCCAGCAGGTGGGATTTTCACCGGTTGTTATTCGCGAAGTTAATGAACCGCAAACGGTACTCGCTATGGTCAGTATGGGCATTGGTATCACATTGATAGCGGACAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTATATATTGTTTATGAAACACAGCAGGTGACGCCCGCGATGGTTAAGCTGTTGGCTGCATTGACACAGTAG", + "dna_sequence_length": 885, + "functions": [ + "transcriptional activator of xapAB" + ], + "id": "CDS_2384", + "location": [ + [ + "NC_000913", + 2522477, + "-", + 885 + ] + ], + "md5": "5f001d87f1a375b13b81c0e5a8b0abe4", + "parent_gene": "", + "protein_md5": "a349e53e7e641c59727a480c8e6f1826", + "protein_translation": "MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRSVVLTHAGKILMEESRRLLVNANNVLARIEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFLRENPNVDVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMPEEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSMGIGITLIADSYAQMNWPGVIFRPLKQRIPADLYIVYETQQVTPAMVKLLAALTQ", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007925" + ], + [ + "gene_synonym", + "ECK2400" + ], + [ + "gene_synonym", + "EcoGene:EG13159" + ], + [ + "gene_synonym", + "GI:16130332" + ], + [ + "gene_synonym", + "GeneID:946868" + ], + [ + "gene_synonym", + "JW2397" + ], + [ + "gene_synonym", + "NP_416901.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45562" + ], + [ + "gene_synonym", + "b2406" + ], + [ + "gene_synonym", + "xapB" + ] + ], + "dna_sequence": "ATGAGCATCGCGATGCGCTTAAAGGTAATGTCCTTTTTGCAATATTTTATCTGGGGGAGCTGGCTGGTTACCCTCGGCTCTTACATGATTAATACTCTTCATTTCACCGGCGCTAATGTTGGCATGGTTTACAGTTCCAAAGGGATCGCCGCGATTATTATGCCTGGTATAATGGGGATCATCGCAGACAAATGGCTGCGCGCAGAACGTGCATACATGCTGTGTCACCTGGTGTGTGCGGGCGTACTTTTTTATGCGGCATCCGTAACTGATCCGGATATGATGTTTTGGGTGATGTTAGTCAATGCGATGGCGTTTATGCCGACTATTGCGTTATCGAACAGCGTCTCTTATTCCTGTCTTGCCCAGGCAGGGCTTGACCCGGTGACCGCTTTCCCGCCCATTCGCGTTTTTGGTACGGTGGGGTTCATTGTCGCGATGTGGGCAGTAAGCCTGCTGCATCTGGAATTGAGTAGTCTGCAGCTGTATATCGCGTCCGGTGCGTCATTGCTGCTGTCGGCTTATGCGCTGACTTTGCCGAAGATTCCGGTTGCGGAGAAAAAAGCGACCACATCGCTTGCCAGCAAGCTGGGTCTGGATGCCTTCGTGCTGTTTAAAAATCCACGCATGGCCATCTTTTTCCTCTTTGCCATGATGCTGGGTGCGGTACTGCAAATTACCAACGTTTTTGGTAATCCGTTCCTACATGATTTCGCCCGTAACCCGGAGTTTGCTGACAGTTTTGTGGTGAAATATCCCTCCATTTTACTGTCAGTTTCACAGATGGCAGAAGTGGGCTTTATACTGACTATCCCATTCTTTTTAAAGCGATTTGGCATTAAAACCGTCATGCTGATGAGTATGGTGGCCTGGACGCTGCGCTTTGGCTTCTTCGCCTATGGCGATCCGTCAACAACCGGATTTATTTTGCTGCTGCTGTCGATGATTGTTTATGGCTGTGCATTCGATTTCTTCAATATTTCTGGTTCGGTATTTGTCGAACAGGAAGTTGATTCCAGCATTCGTGCCAGCGCGCAGGGGCTCTTTATGACCATGGTAAATGGTGTCGGCGCATGGGTTGGCTCGATTCTGAGTGGCATGGCAGTAGATTACTTTTCGGTGGATGGCGTAAAAGACTGGCAAACTATCTGGCTGGTGTTTGCAGGATATGCTCTTTTTCTCGCAGTGATATTTTTCTTTGGGTTTAAATATAATCATGACCCTGAAAAGATAAAGCATCGAGCGGTGACTCATTAA", + "dna_sequence_length": 1257, + "functions": [ + "xanthosine transporter" + ], + "id": "CDS_2385", + "location": [ + [ + "NC_000913", + 2523985, + "-", + 1257 + ] + ], + "md5": "c4e46e1f0e0dfa21bb64ab4591e1033e", + "parent_gene": "", + "protein_md5": "d273c6e2ab3e7543c571307a7fbfc102", + "protein_translation": "MSIAMRLKVMSFLQYFIWGSWLVTLGSYMINTLHFTGANVGMVYSSKGIAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVNAMAFMPTIALSNSVSYSCLAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSLQLYIASGASLLLSAYALTLPKIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAMMLGAVLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIKTVMLMSMVAWTLRFGFFAYGDPSTTGFILLLLSMIVYGCAFDFFNISGSVFVEQEVDSSIRASAQGLFMTMVNGVGAWVGSILSGMAVDYFSVDGVKDWQTIWLVFAGYALFLAVIFFFGFKYNHDPEKIKHRAVTH", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007927" + ], + [ + "gene_synonym", + "ECK2401" + ], + [ + "gene_synonym", + "EcoGene:EG20250" + ], + [ + "gene_synonym", + "GI:16130333" + ], + [ + "gene_synonym", + "GeneID:946878" + ], + [ + "gene_synonym", + "JW2398" + ], + [ + "gene_synonym", + "NP_416902.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45563" + ], + [ + "gene_synonym", + "b2407" + ], + [ + "gene_synonym", + "pndA" + ], + [ + "gene_synonym", + "xapA" + ] + ], + "dna_sequence": "ATGTCTCAGGTTCAATTTTCTCATAACCCGCTGTTTTGCATAGATATTATCAAGACTTATAAACCTGATTTCACGCCACGAGTGGCCTTTATTTTAGGTTCCGGGCTCGGCGCGCTGGCCGATCAGATTGAGAACGCTGTCGCAATTTCCTACGAAAAGCTGCCGGGCTTCCCGGTAAGTACGGTACATGGTCATGCGGGGGAGTTAGTGCTGGGCCATCTCCAGGGCGTACCGGTGGTATGTATGAAAGGTCGCGGACATTTCTACGAAGGTCGTGGAATGACCATTATGACTGACGCAATTCGTACCTTTAAGCTGCTGGGCTGCGAGCTACTGTTCTGCACCAATGCGGCAGGCTCGCTGCGTCCGGAAGTGGGGGCAGGCAGCCTGGTCGCATTGAAAGATCATATCAACACCATGCCCGGTACGCCGATGGTGGGTCTTAACGATGATCGTTTTGGAGAGCGCTTCTTCTCACTGGCAAATGCCTACGATGCGGAATACCGCGCACTGTTACAAAAAGTGGCGAAAGAAGAGGGTTTCCCTCTGACGGAGGGCGTGTTCGTCTCGTATCCGGGGCCGAATTTCGAGACTGCGGCGGAAATTCGCATGATGCAAATTATTGGTGGGGATGTTGTTGGTATGTCTGTGGTGCCTGAGGTTATTTCAGCTCGCCATTGCGACCTTAAAGTCGTTGCGGTCTCTGCGATTACCAATATGGCGGAAGGTTTAAGCGATGTGAAATTGTCACATGCGCAAACGCTGGCGGCTGCGGAGCTCTCTAAGCAGAACTTCATCAACCTTATTTGTGGCTTTCTGCGCAAAATTGCCTGA", + "dna_sequence_length": 834, + "functions": [ + "purine nucleoside phosphorylase 2", + "nicotinamide 1-beta-D-riboside synthase" + ], + "id": "CDS_2386", + "location": [ + [ + "NC_000913", + 2524878, + "-", + 834 + ] + ], + "md5": "cbcb9304176c94157eec2e1613ca13f3", + "parent_gene": "", + "protein_md5": "810ed5968ddc5e27d1081642822c0e04", + "protein_translation": "MSQVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIENAVAISYEKLPGFPVSTVHGHAGELVLGHLQGVPVVCMKGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSLANAYDAEYRALLQKVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKVVAVSAITNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKIA", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007930" + ], + [ + "gene_synonym", + "ECK2402" + ], + [ + "gene_synonym", + "EcoGene:EG13160" + ], + [ + "gene_synonym", + "GI:16130334" + ], + [ + "gene_synonym", + "GeneID:946872" + ], + [ + "gene_synonym", + "JW2399" + ], + [ + "gene_synonym", + "NP_416903.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45564" + ], + [ + "gene_synonym", + "b2408" + ], + [ + "gene_synonym", + "yfeN" + ] + ], + "dna_sequence": "ATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCTGGACTGGACCAGCCGGACTACCGAAAAATCGTCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAGTTGGGGAGAAATGTACGGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCAGGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCACCTACGGTTCTGCGAATCGCGTGAATTTCCACGACGATATGTTCCTGTACGGTATCGGCTACAATTTCACCGGCAGCGGTTGGTGGTTCAAACCGTTCTTTGCTAAGCGTTATACAGATCAAACCTATTACACTGGCGACAACGGCTATGTCGCCGGCTGGGTTGCAGGTTACAACTTTATGCTGGGCAGCGAGAAATTCACTCTTACCAACTGGAACGAGTACGAGTTTGACCGTGACGCTACCTATGCAGCGGGTAATGGCGGTAAAGAAGGGCTGAATGGCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGA", + "dna_sequence_length": 765, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_2387", + "location": [ + [ + "NC_000913", + 2525127, + "+", + 765 + ] + ], + "md5": "9a1f37d6b1d63846fe0e8792b18f3961", + "parent_gene": "", + "protein_md5": "d013800745a406ed3e2f821f4a0fb62a", + "protein_translation": "MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGEDFYQDAIIYSIKFNF", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007932" + ], + [ + "gene_synonym", + "ECK2403" + ], + [ + "gene_synonym", + "EcoGene:EG14159" + ], + [ + "gene_synonym", + "GI:16130335" + ], + [ + "gene_synonym", + "GeneID:946873" + ], + [ + "gene_synonym", + "JW2400" + ], + [ + "gene_synonym", + "NP_416904.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACR7" + ], + [ + "gene_synonym", + "b2409" + ], + [ + "gene_synonym", + "osmT" + ], + [ + "gene_synonym", + "yfeR" + ] + ], + "dna_sequence": "ATGAATTATTCTTTAAAACAATTAAAGGTTTTCGTCACAGTAGCGCAGGAGAAAAGTTTTAGTCGTGCAGGAGAGCGTATCGGCCTGAGCCAGTCGGCAGTGAGTCACAGTGTGAAGGAACTGGAAAATCATACTGGTGTTCGCCTGCTGGACAGAACCACGCGTGAAGTGGTGCTTACAGATGCAGGGCAGCAGCTGGCTTTGCGTCTTGAGCGACTGCTGGATGAACTGAACAGCACGTTGCGCGATACCGGGCGTATGGGGCAACAACTGAGCGGAAAAGTTCGGGTCGCTGCCAGCCAGACCATTTCCGCGCATCTTATTCCGCAATGCATTGCTGAAAGCCATCGCCGCTATCCAGATATTCAGTTTGTCCTGCACGATCGTCCGCAGCAGTGGGTAATGGAAAGTATTCGCCAGGGAGATGTCGATTTTGGCATCGTCATCGATCCAGGCCCAGTGGGCGATCTGCAATGTGAAGCGATTCTTTCCGAGCCTTTCTTTCTGCTTTGCCATCGCGATAGCGCTTTGGCCGTGGAAGATTATGTACCCTGGCAGGCATTACAGGGAGCGAAATTGGTGTTGCAGGATTACGCGTCAGGCAGCCGACCGCTGATTGACGCAGCGCTGGCGCGCAATGGTATTCAGGCGAATATTGTGCAGGAGATTGGACATCCGGCGACGCTGTTCCCGATGGTAGCCGCAGGCATCGGCATCAGTATTCTTCCCGCACTGGCGCTACCATTGCCTGAAGGTAGCCCACTGGTGGTAAAGCGCATTACGCCGGTTGTTGAACGCCAGTTGATGCTGGTGCGCAGGAAGAACCGTTCACTTTCCACCGCCGCTGAAGCTTTATGGGACGTGGTACGAGACCAGGGCAATGCGCTAATGGCTGGGCGGGAAGGGGATCCGTTGTATCAGATATAG", + "dna_sequence_length": 927, + "functions": [ + "transcriptional regulator of yefH" + ], + "id": "CDS_2388", + "location": [ + [ + "NC_000913", + 2526856, + "-", + 927 + ] + ], + "md5": "2ffc1fb5d54d03d3056688743dcd17ef", + "parent_gene": "", + "protein_md5": "f0648d0531ada3da457da12529d932c4", + "protein_translation": "MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREGDPLYQI", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007936" + ], + [ + "gene_synonym", + "ECK2404" + ], + [ + "gene_synonym", + "EcoGene:EG12376" + ], + [ + "gene_synonym", + "GI:16130336" + ], + [ + "gene_synonym", + "GeneID:946874" + ], + [ + "gene_synonym", + "JW5876" + ], + [ + "gene_synonym", + "NP_416905.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39836" + ], + [ + "gene_synonym", + "b2410" + ], + [ + "gene_synonym", + "yfeH" + ] + ], + "dna_sequence": "ATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTCCGGCCAGAGGCGATTTCGTCCCCTTCTTTGAAAATCTGACCACCGCAGCTATTGCCCTGCTGTTCTTTATGCACGGCGCGAAGTTGTCGCGTGAGGCGATTATTGCTGGCGGTGGTCACTGGCGACTGCATTTGTGGGTAATGTGCAGCACCTTCGTGCTGTTTCCGATTCTGGGTGTACTGTTTGCCTGGTGGAAACCGGTAAATGTCGACCCGATGCTCTACTCCGGTTTTCTCTACTTGTGCATTCTCCCGGCTACCGTGCAGTCTGCAATCGCCTTCACGTCAATGGCGGGCGGTAACGTCGCGGCAGCGGTTTGTTCTGCGTCGGCATCCAGCCTGCTGGGGATTTTCCTTTCACCATTGCTGGTTGGTCTGGTGATGAATGTTCACGGTGCAGGGGGCAGCCTTGAGCAGGTCGGTAAAATTATGCTGCAACTGCTGCTGCCGTTTGTGTTGGGGCATCTTTCCCGGCCGTGGATTGGTGACTGGGTGTCGCGCAATAAAAAATGGATTGCGAAAACTGACCAGACGTCCATTCTGTTGGTGGTTTATACAGCGTTCAGCGAAGCCGTCGTTAATGGTATCTGGCATAAAGTTGGCTGGGGATCATTGCTGTTTATCGTGGTGGTCAGCTGCGTTCTTCTGGCTATCGTGATTGTAGTTAACGTCTTTATGGCACGCCGACTGAGCTTCAATAAGGCAGATGAAATTACTATCGTCTTTTGTGGTTCGAAAAAGAGTCTGGCAAATGGCATCCCGATGGCAAACATTCTGTTCCCCACATCGGTGATCGGTATGATGGTGCTGCCCCTGATGATTTTCCATCAGATCCAATTGATGGTCTGTGCGGTGCTGGCGCGTCGATACAAACGCCAGACCGAACAGTTACAGGCGCAGCAGGAAAGCAGCGCCGATAAAGCTTAA", + "dna_sequence_length": 999, + "functions": [ + "putative inorganic ion transporter" + ], + "id": "CDS_2389", + "location": [ + [ + "NC_000913", + 2526946, + "+", + 999 + ] + ], + "md5": "95367173972dc1c88b66cbd8e8b0d284", + "parent_gene": "", + "protein_md5": "c556e29794117f257152eefec0fd446e", + "protein_translation": "MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLSFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285067" + ], + [ + "gene_synonym", + "ECK2405" + ], + [ + "gene_synonym", + "EcoGene:EG14366" + ], + [ + "gene_synonym", + "GI:94541121" + ], + [ + "gene_synonym", + "GeneID:1450285" + ], + [ + "gene_synonym", + "JW5877" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD40" + ], + [ + "gene_synonym", + "YP_588464.1" + ], + [ + "gene_synonym", + "b4546" + ], + [ + "gene_synonym", + "ypeB" + ] + ], + "dna_sequence": "ATGGAAAAAGAGCAGCTGATTGAAATAGCCAATACGATAATGCCGTTTGGCAAATACAAAGGGCGTCGCTTAATCGACCTGCCGGAGGAGTATCTGCTGTGGTTTGCCCGCAAAGATGAGTTCCCGGCAGGGAAGCTCGGTGAGCTAATGCAAATCACGCTGCTGATTAAAACCGAGGGGCTGACGCAACTGGTCCAGCCCCTGAAGCGTCCGCTTTAA", + "dna_sequence_length": 219, + "functions": [ + "DUF3820 family protein" + ], + "id": "CDS_2390", + "location": [ + [ + "NC_000913", + 2528159, + "-", + 219 + ] + ], + "md5": "c7693dc3ba54e2da5a6f9beba599a0cc", + "parent_gene": "", + "protein_md5": "40a7020ae00c1ec205d5229a05bdacc3", + "protein_translation": "MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEGLTQLVQPLKRPL", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007938" + ], + [ + "gene_synonym", + "ECK2406" + ], + [ + "gene_synonym", + "EcoGene:EG10534" + ], + [ + "gene_synonym", + "GI:16130337" + ], + [ + "gene_synonym", + "GeneID:946885" + ], + [ + "gene_synonym", + "JW2403" + ], + [ + "gene_synonym", + "NP_416906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15042" + ], + [ + "gene_synonym", + "b2411" + ], + [ + "gene_synonym", + "dnaL" + ], + [ + "gene_synonym", + "lig" + ], + [ + "gene_synonym", + "ligA" + ], + [ + "gene_synonym", + "lop" + ], + [ + "gene_synonym", + "pdeC" + ] + ], + "dna_sequence": "ATGGAATCAATCGAACAACAACTGACAGAACTGCGAACGACGCTTCGCCATCATGAATATCTTTATCATGTGATGGATGCGCCGGAAATTCCCGACGCTGAATACGACAGGCTGATGCGCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGCGCTGCGCCGCTGGCGGCTTTCAGCCAGATACGCCATGAAGTACCAATGCTGTCACTGGATAACGTTTTTGATGAAGAAAGCTTTCTTGCTTTCAACAAACGTGTGCAGGACCGTCTGAAAAACAACGAGAAAGTCACCTGGTGCTGTGAGCTGAAGCTGGATGGTCTTGCCGTCAGTATTCTGTATGAAAATGGCGTTTTAGTCAGTGCCGCGACCCGTGGCGATGGCACCACCGGGGAAGATATCACGTCTAATGTGCGTACTATTCGCGCCATTCCGCTGAAGCTGCACGGAGAGAATATCCCGGCGCGTCTGGAAGTGCGTGGTGAAGTGTTCCTGCCGCAGGCGGGGTTCGAAAAGATTAACGAAGATGCGCGACGCACGGGCGGGAAAGTGTTTGCTAACCCACGTAATGCGGCAGCTGGTTCACTGCGTCAGCTTGATCCGCGTATTACAGCGAAGCGACCGCTCACTTTTTTCTGCTATGGCGTTGGTGTTCTGGAAGGTGGCGAGCTGCCGGATACTCATCTTGGCCGTTTACTGCAATTTAAAAAGTGGGGGTTGCCGGTCAGCGATCGGGTAACGCTTTGTGAATCGGCGGAAGAAGTGCTGGCGTTCTATCACAAAGTGGAAGAAGACCGCCCGACGCTGGGCTTTGATATCGACGGCGTGGTGATTAAGGTCAACTCACTGGCACAGCAGGAGCAGCTTGGCTTTGTCGCGCGTGCCCCGCGCTGGGCGGTAGCGTTTAAATTCCCGGCGCAGGAGCAGATGACCTTTGTGCGTGACGTCGAGTTTCAGGTTGGGCGTACTGGCGCGATTACGCCTGTTGCGCGTCTGGAACCTGTCCATGTTGCAGGCGTGCTGGTGAGTAACGCAACCTTACACAATGCGGATGAAATCGAACGTCTTGGTTTACGCATTGGCGATAAAGTGGTGATTCGCCGCGCTGGCGACGTGATCCCGCAGGTGGTTAACGTCGTGCTTTCTGAACGCCCGGAAGATACCCGTGAGGTTGTATTCCCGACGCATTGTCCGGTATGTGGTTCTGACGTTGAGCGTGTGGAAGGTGAAGCGGTTGCCCGCTGTACCGGTGGCCTGATTTGCGGTGCGCAGCGTAAAGAGTCGCTGAAACACTTTGTTTCCCGCCGTGCGATGGATGTTGACGGAATGGGCGACAAAATCATCGATCAGCTGGTTGAAAAAGAATATGTCCATACTCCGGCAGATCTGTTCAAACTCACCGCAGGCAAACTGACCGGACTGGAGCGTATGGGGCCAAAATCGGCACAAAACGTGGTTAACGCGCTGGAAAAAGCGAAAGAAACCACCTTTGCTCGCTTCCTCTATGCACTTGGCATCCGTGAAGTCGGCGAGGCCACCGCAGCAGGTCTGGCGGCATATTTCGGCACGCTGGAAGCGCTGGAAGCCGCTTCGATTGAAGAGCTGCAAAAGGTGCCTGATGTTGGCATTGTCGTTGCATCCCACGTTCACAACTTCTTTGCCGAAGAAAGCAACCGCAATGTCATCAGCGAGCTGTTGGCGGAAGGTGTTCACTGGCCTGCGCCGATCGTTATCAACGCGGAAGAGATTGACAGCCCGTTTGCTGGTAAAACCGTGGTGCTTACGGGCAGCTTAAGCCAGATGTCGCGTGATGACGCTAAAGCTCGACTGGTCGAACTGGGCGCGAAAGTCGCGGGCAGCGTGTCGAAGAAAACCGATCTGGTGATAGCGGGTGAAGCTGCAGGATCTAAACTGGCGAAGGCGCAGGAACTGGGCATTGAAGTCATCGACGAAGCGGAAATGCTGCGTTTGCTGGGTAGCTGA", + "dna_sequence_length": 2016, + "functions": [ + "DNA ligase, NAD(+)-dependent" + ], + "id": "CDS_2391", + "location": [ + [ + "NC_000913", + 2530176, + "-", + 2016 + ] + ], + "md5": "3ef8490de1ff8947666d8e4ea7f30e8e", + "parent_gene": "", + "protein_md5": "e670abef1f47c5d874183e1212cce4af", + "protein_translation": "MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS", + "protein_translation_length": 671, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007942" + ], + [ + "gene_synonym", + "ECK2407" + ], + [ + "gene_synonym", + "EcoGene:EG14169" + ], + [ + "gene_synonym", + "GI:16130338" + ], + [ + "gene_synonym", + "GeneID:946869" + ], + [ + "gene_synonym", + "JW2404" + ], + [ + "gene_synonym", + "NP_416907.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77173" + ], + [ + "gene_synonym", + "b2412" + ], + [ + "gene_synonym", + "zipA" + ] + ], + "dna_sequence": "ATGATGCAGGATTTGCGTCTGATATTAATCATTGTTGGCGCGATCGCCATAATCGCTTTACTGGTACATGGTTTCTGGACCAGCCGTAAAGAACGATCTTCTATGTTCCGCGATCGGCCATTAAAACGAATGAAGTCAAAACGTGACGACGATTCTTATGACGAGGATGTCGAAGATGATGAGGGCGTTGGTGAGGTTCGTGTTCACCGCGTGAATCATGCCCCGGCTAACGCTCAGGAGCATGAGGCTGCTCGTCCGTCGCCGCAACACCAGTACCAACCGCCTTATGCGTCTGCGCAGCCGCGTCAACCGGTCCAGCAGCCGCCTGAAGCGCAGGTACCGCCGCAACATGCTCCGCATCCAGCGCAGCCGGTGCAGCAGCCTGCCTATCAGCCGCAGCCTGAACAGCCGTTGCAGCAGCCAGTTTCGCCACAGGTCGCGCCAGCGCCGCAGCCTGTGCATTCAGCACCGCAACCGGCACAACAGGCTTTCCAGCCTGCAGAACCCGTAGCGGCACCACAGCCTGAGCCTGTAGCGGAACCTGCTCCAGTTATGGATAAACCGAAGCGCAAAGAAGCGGTGATTATCATGAACGTCGCGGCGCATCACGGTAGCGAGCTAAACGGTGAACTGCTTCTTAACAGCATTCAACAAGCGGGCTTCATTTTTGGCGATATGAATATTTACCATCGTCATCTTAGCCCGGATGGCAGCGGCCCGGCGTTATTCAGCCTGGCGAATATGGTGAAACCGGGAACCTTTGATCCTGAAATGAAGGATTTCACTACTCCGGGTGTCACTATCTTTATGCAGGTACCGTCTTACGGTGACGAGCTGCAGAACTTCAAGCTGATGCTGCAATCTGCGCAGCATATTGCCGATGAAGTGGGCGGTGTCGTGCTTGACGATCAGCGCCGTATGATGACTCCGCAGAAATTGCGCGAGTACCAGGACATCATCCGCGAAGTCAAAGACGCCAACGCCTGA", + "dna_sequence_length": 987, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_2392", + "location": [ + [ + "NC_000913", + 2531233, + "-", + 987 + ] + ], + "md5": "f0abdc1dcdb10d2850e9c1fbb1e3b035", + "parent_gene": "", + "protein_md5": "909981ff266ee1accd4aa9206a0e7129", + "protein_translation": "MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPHPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007953" + ], + [ + "gene_synonym", + "ECK2408" + ], + [ + "gene_synonym", + "EcoGene:EG10003" + ], + [ + "gene_synonym", + "GI:16130339" + ], + [ + "gene_synonym", + "GeneID:946875" + ], + [ + "gene_synonym", + "JW2406" + ], + [ + "gene_synonym", + "NP_416908.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6J3" + ], + [ + "gene_synonym", + "b2413" + ], + [ + "gene_synonym", + "cysZ" + ] + ], + "dna_sequence": "ATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATCTGTTGTGGCCTCTGGCTGTCATCTCTGTGCTGTTAGTGTTTGGCTATTTCTTCTCCACGATTGCTAACTGGATTGCCGCTCCGTTTAACGGTTTATTGGCTGAACAACTGGAAGCACGATTGACTGGCGCTACACCGCCAGATACCGGGATTTTCGGTATCATGAAAGATGTGCCGCGAATCATGAAACGCGAATGGCAAAAATTTGCCTGGTATCTGCCGCGCGCAATTGTATTACTAATTCTTTACTTCATCCCTGGTATTGGGCAAACCGTCGCGCCGGTACTGTGGTTCCTGTTTAGCGCCTGGATGTTAGCCATCCAGTATTGCGATTACCCCTTCGATAACCACAAAGTGCCGTTTAAAGAGATGCGCACCGCCCTGCGCACACGCAAAATCACCAATATGCAGTTTGGTGCTTTAACCAGCCTGTTTACGATGATCCCGCTGCTTAATCTGTTCATCATGCCCGTTGCCGTTTGTGGCGCGACGGCGATGTGGGTCGATTGCTATCGCGATAAACACGCGATGTGGCGGTAA", + "dna_sequence_length": 762, + "functions": [ + "sulfate transporter, sulfite inhibited" + ], + "id": "CDS_2393", + "location": [ + [ + "NC_000913", + 2531463, + "+", + 762 + ] + ], + "md5": "384ba9f192488cd20f3846f3e826f10e", + "parent_gene": "", + "protein_md5": "dbff7c9b90f1e95a740c4485693de230", + "protein_translation": "MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAPFNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIPGIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007957" + ], + [ + "gene_synonym", + "ECK2409" + ], + [ + "gene_synonym", + "EcoGene:EG10192" + ], + [ + "gene_synonym", + "GI:16130340" + ], + [ + "gene_synonym", + "GeneID:946877" + ], + [ + "gene_synonym", + "JW2407" + ], + [ + "gene_synonym", + "NP_416909.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK5" + ], + [ + "gene_synonym", + "b2414" + ], + [ + "gene_synonym", + "cysK" + ], + [ + "gene_synonym", + "cysZ" + ] + ], + "dna_sequence": "ATGAGTAAGATTTTTGAAGATAACTCGCTGACTATCGGTCACACGCCGCTGGTTCGCCTGAATCGCATCGGTAACGGACGCATTCTGGCGAAGGTGGAATCTCGTAACCCCAGCTTCAGCGTTAAGTGCCGTATCGGTGCCAACATGATTTGGGATGCCGAAAAGCGCGGCGTGCTGAAACCAGGCGTTGAACTGGTTGAACCGACCAGCGGTAATACCGGGATTGCACTGGCCTATGTAGCTGCCGCTCGCGGTTACAAACTCACCCTGACCATGCCAGAAACCATGAGTATTGAACGCCGCAAGCTGCTGAAAGCGTTAGGTGCAAACCTGGTGCTGACGGAAGGTGCTAAAGGCATGAAAGGCGCAATCCAAAAAGCAGAAGAAATTGTCGCCAGCAATCCAGAGAAATACCTGCTGCTGCAACAATTCAGCAATCCGGCAAACCCTGAAATTCACGAAAAGACCACCGGTCCGGAGATATGGGAAGATACCGACGGTCAGGTTGATGTATTTATTGCTGGCGTTGGGACTGGCGGTACGCTGACTGGCGTCAGCCGCTACATTAAAGGCACCAAAGGCAAGACCGATCTTATCTCTGTCGCCGTTGAGCCAACCGATTCTCCAGTTATCGCCCAGGCGCTGGCAGGTGAAGAGATTAAACCTGGCCCGCATAAAATTCAGGGTATTGGCGCTGGTTTTATCCCGGCTAACCTCGATCTCAAGCTGGTCGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCACCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAA", + "dna_sequence_length": 972, + "functions": [ + "cysteine synthase A, O-acetylserine sulfhydrolase A subunit" + ], + "id": "CDS_2394", + "location": [ + [ + "NC_000913", + 2532409, + "+", + 972 + ] + ], + "md5": "ce48e0b6a7cae2707d3c3a6035529340", + "parent_gene": "", + "protein_md5": "9675ae45136a897a184c15dedd7ec1c6", + "protein_translation": "MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007962" + ], + [ + "gene_synonym", + "ECK2410" + ], + [ + "gene_synonym", + "EcoGene:EG10788" + ], + [ + "gene_synonym", + "GI:16130341" + ], + [ + "gene_synonym", + "GeneID:946886" + ], + [ + "gene_synonym", + "JW2408" + ], + [ + "gene_synonym", + "NP_416910.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA04" + ], + [ + "gene_synonym", + "b2415" + ], + [ + "gene_synonym", + "ctr" + ], + [ + "gene_synonym", + "hpr" + ], + [ + "gene_synonym", + "iex?" + ], + [ + "gene_synonym", + "ptsH" + ] + ], + "dna_sequence": "ATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGCCCTGCTGCCCAGTTTGTAAAAGAAGCTAAGGGCTTCACTTCTGAAATTACTGTGACTTCCAACGGCAAAAGCGCCAGCGCGAAAAGCCTGTTTAAACTGCAGACTCTGGGCCTGACTCAAGGTACCGTTGTGACTATCTCCGCAGAAGGCGAAGACGAGCAGAAAGCGGTTGAACATCTGGTTAAACTGATGGCGGAACTCGAGTAA", + "dna_sequence_length": 258, + "functions": [ + "phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)" + ], + "id": "CDS_2395", + "location": [ + [ + "NC_000913", + 2533764, + "+", + 258 + ] + ], + "md5": "f2f8e562abca57bd8736550c2e341115", + "parent_gene": "", + "protein_md5": "30f33c2d8de065a355696e4e16a20b30", + "protein_translation": "MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007967" + ], + [ + "gene_synonym", + "ECK2411" + ], + [ + "gene_synonym", + "EcoGene:EG10789" + ], + [ + "gene_synonym", + "GI:16130342" + ], + [ + "gene_synonym", + "GeneID:946879" + ], + [ + "gene_synonym", + "JW2409" + ], + [ + "gene_synonym", + "NP_416911.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08839" + ], + [ + "gene_synonym", + "b2416" + ], + [ + "gene_synonym", + "ctr" + ], + [ + "gene_synonym", + "ptsI" + ] + ], + "dna_sequence": "ATGATTTCAGGCATTTTAGCATCCCCGGGTATCGCTTTCGGTAAAGCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGTGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGCAGGAAATCATAGCCCTGATTAAAGATAAGCACATGACAGCTGACGCAGCTGCTCATGAAGTTATCGAAGGTCAGGCTTCTGCCCTGGAAGAGCTGGATGATGAATACCTGAAAGAACGTGCGGCTGACGTACGTGATATCGGTAAGCGCCTGCTGCGCAACATCCTGGGCCTGAAGATTATCGACCTGAGCGCCATTCAGGATGAAGTCATTCTGGTTGCCGCTGACCTGACGCCGTCCGAAACCGCACAGCTGAACCTGAAGAAGGTGCTGGGTTTCATCACCGACGCGGGTGGCCGTACTTCCCACACCTCTATCATGGCGCGTTCTCTGGAACTACCTGCTATCGTGGGTACCGGTAGCGTCACCTCTCAGGTGAAAAATGACGACTATCTGATTCTGGATGCCGTAAATAATCAGGTTTACGTCAATCCAACCAACGAAGTTATTGATAAAATGCGCGCTGTTCAGGAGCAAGTGGCTTCTGAAAAAGCAGAGCTTGCTAAACTGAAAGATCTGCCAGCTATTACGCTGGACGGTCACCAGGTAGAAGTATGCGCTAACATTGGTACGGTTCGTGACGTTGAAGGTGCAGAGCGTAACGGCGCTGAAGGCGTTGGTCTGTATCGTACTGAGTTCCTGTTCATGGACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTATCGCGATGGATCGTAGAGAGATCCTGCGCGATCAGCTCCGCGCTATCCTGCGTGCCTCGGCTTTCGGTAAATTGCGCATTATGTTCCCGATGATCATCTCTGTTGAAGAAGTGCGTGCACTGCGCAAAGAGATCGAAATCTACAAACAGGAACTGCGCGACGAAGGTAAAGCGTTTGACGAGTCAATTGAAATCGGCGTAATGGTGGAAACACCGGCTGCCGCAACAATTGCACGTCATTTAGCCAAAGAAGTTGATTTCTTTAGTATCGGCACCAATGATTTAACGCAGTACACTCTGGCAGTTGACCGTGGTAATGATATGATTTCACACCTTTACCAGCCAATGTCACCGTCCGTGCTGAACTTGATCAAGCAAGTTATTGATGCTTCTCATGCTGAAGGCAAATGGACTGGCATGTGTGGTGAGCTTGCTGGCGATGAACGTGCTACACTTCTGTTGCTGGGGATGGGTCTGGACGAATTCTCTATGAGCGCCATTTCTATCCCGCGCATTAAGAAGATTATCCGTAACACGAACTTCGAAGATGCGAAGGTGTTAGCAGAGCAGGCTCTTGCTCAACCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAA", + "dna_sequence_length": 1728, + "functions": [ + "PEP-protein phosphotransferase of PTS system (enzyme I)" + ], + "id": "CDS_2396", + "location": [ + [ + "NC_000913", + 2534066, + "+", + 1728 + ] + ], + "md5": "762a4ba85d716fa2207ceb7107ce08a9", + "parent_gene": "", + "protein_md5": "91bd43f5ae683b80ea757a9c967b9398", + "protein_translation": "MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC", + "protein_translation_length": 575, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007971" + ], + [ + "gene_synonym", + "ECK2412" + ], + [ + "gene_synonym", + "EcoGene:EG10165" + ], + [ + "gene_synonym", + "GI:16130343" + ], + [ + "gene_synonym", + "GeneID:946880" + ], + [ + "gene_synonym", + "JW2410" + ], + [ + "gene_synonym", + "NP_416912.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69783" + ], + [ + "gene_synonym", + "b2417" + ], + [ + "gene_synonym", + "crr" + ], + [ + "gene_synonym", + "gsr" + ], + [ + "gene_synonym", + "iex" + ], + [ + "gene_synonym", + "tgs" + ], + [ + "gene_synonym", + "treD" + ] + ], + "dna_sequence": "ATGGGTTTGTTCGATAAACTGAAATCTCTGGTTTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCAACGGGTAACAAAATGGTCGCGCCAGTAGACGGCACCATTGGTAAAATCTTTGAAACCAACCACGCATTCTCTATCGAATCTGATAGCGGCGTTGAACTGTTCGTCCACTTCGGTATCGACACCGTTGAACTGAAAGGCGAAGGCTTCAAGCGTATTGCTGAAGAAGGTCAGCGCGTGAAAGTTGGCGATACTGTCATTGAATTTGATCTGCCGCTGCTGGAAGAGAAAGCCAAGTCTACCCTGACTCCGGTTGTTATCTCCAACATGGACGAAATCAAAGAACTGATCAAACTGTCCGGTAGCGTAACCGTGGGTGAAACCCCGGTTATCCGCATCAAGAAGTAA", + "dna_sequence_length": 510, + "functions": [ + "glucose-specific enzyme IIA component of PTS" + ], + "id": "CDS_2397", + "location": [ + [ + "NC_000913", + 2535834, + "+", + 510 + ] + ], + "md5": "37cb55a74df5c0756b272484156a111a", + "parent_gene": "", + "protein_md5": "eee28c230b565de59322e7a02f56dcc3", + "protein_translation": "MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007973" + ], + [ + "gene_synonym", + "ECK2413" + ], + [ + "gene_synonym", + "EcoGene:EG12642" + ], + [ + "gene_synonym", + "GI:16130344" + ], + [ + "gene_synonym", + "GeneID:946881" + ], + [ + "gene_synonym", + "JW2411" + ], + [ + "gene_synonym", + "NP_416913.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40191" + ], + [ + "gene_synonym", + "b2418" + ], + [ + "gene_synonym", + "pdxK" + ], + [ + "gene_synonym", + "pdxL" + ], + [ + "gene_synonym", + "thiJ" + ], + [ + "gene_synonym", + "yfeI" + ] + ], + "dna_sequence": "ATGAGTAGTTTGTTGTTGTTTAACGATAAGAGTAGGGCACTGCAGGCGGATATCGTCGCCGTGCAGTCGCAGGTGGTTTACGGCAGCGTGGGCAACAGCATTGCCGTGCCTGCTATCAAACAGAACGGCCTGAATGTCTTTGCCGTGCCGACGGTATTGCTGAGCAATACGCCGCATTATGACACTTTCTACGGTGGTGCGATTCCGGACGAATGGTTTAGCGGCTATTTGCGTGCGCTTCAGGAGCGTGATGCGCTGCGCCAACTTCGTGCTGTAACCACGGGCTATATGGGAACGGCATCGCAAATCAAAATCCTTGCCGAGTGGCTGACTGCGCTACGCAAAGACCATCCTGACCTATTGATCATGGTCGATCCGGTGATTGGCGATATTGATAGCGGAATTTATGTCAAACCTGACCTTCCCGAAGCGTATCGACAATATTTACTGCCGCTGGCGCAGGGAATTACCCCCAATATCTTTGAGTTGGAAATCCTGACCGGTAAAAATTGCCGCGATCTCGACAGTGCCATTGCTGCCGCAAAAAGTCTGCTTTCAGACACATTAAAATGGGTGGTGGTTACCAGCGCCTCCGGTAATGAAGAAAATCAGGAGATGCAGGTTGTGGTGGTCACTGCCGACAGCGTGAATGTCATTTCCCATTCACGGGTAAAAACCGACCTGAAAGGGACTGGCGACCTGTTTTGTGCTCAGCTCATCAGTGGCTTGCTGAAAGGGAAGGCGTTAACCGATGCAGTGCACCGAGCGGGGTTGCGCGTACTGGAAGTGATGCGCTACACCCAGCAGCATGAGAGCGATGAATTGATTTTGCCGCCGCTGGCGGAAGCATAA", + "dna_sequence_length": 852, + "functions": [ + "pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase" + ], + "id": "CDS_2398", + "location": [ + [ + "NC_000913", + 2537237, + "-", + 852 + ] + ], + "md5": "4759e93afed869b62567b3492fdeaa4a", + "parent_gene": "", + "protein_md5": "d371d2d204ff54d40970d93dbfef7c21", + "protein_translation": "MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKTDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007977" + ], + [ + "gene_synonym", + "ECK2414" + ], + [ + "gene_synonym", + "EcoGene:EG12644" + ], + [ + "gene_synonym", + "GI:16130345" + ], + [ + "gene_synonym", + "GeneID:946876" + ], + [ + "gene_synonym", + "JW2412" + ], + [ + "gene_synonym", + "NP_416914.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47702" + ], + [ + "gene_synonym", + "b2419" + ], + [ + "gene_synonym", + "yfeK" + ] + ], + "dna_sequence": "ATGAAGAAAATCATTTGTCTGGTCATTACACTACTAATGACACTCCCCGTTTACGCGAAGTTAACTGCCCATGAAGAAGCCCGCATCAACGCCATGCTGGAGGGATTAGCACAGAAAAAGGATTTGATATTTGTGCGCAACGGTGATGAACATACCTGCTATGAAGCGGTTTCTCATCTGCGTCTGAAGCTCGGCAATACCCGTAACCGCATTGACACTGCCGAGCAGTTTATTGATAAGGTTGCTTCGTCGTCATCGATTACTGGGAAGCCGTATATTGTGAAGATCCCCGGTAAGAGCGATGAGAACGCACAGCCTTTTTTACATGCGTTAATTGCGCAGACGGATAAAACGGTGCCTGCGGAAGGAAATTAA", + "dna_sequence_length": 375, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2399", + "location": [ + [ + "NC_000913", + 2537342, + "+", + 375 + ] + ], + "md5": "290a821d3d7f0c0842fc42a9a46bbec5", + "parent_gene": "", + "protein_md5": "b2fa010e4341b27b468c57421675913c", + "protein_translation": "MKKIICLVITLLMTLPVYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCYEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDENAQPFLHALIAQTDKTVPAEGN", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007979" + ], + [ + "gene_synonym", + "ECK2415" + ], + [ + "gene_synonym", + "EcoGene:EG14160" + ], + [ + "gene_synonym", + "GI:16130346" + ], + [ + "gene_synonym", + "GeneID:946887" + ], + [ + "gene_synonym", + "JW2413" + ], + [ + "gene_synonym", + "NP_416915.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78271" + ], + [ + "gene_synonym", + "b2420" + ], + [ + "gene_synonym", + "yfeS" + ] + ], + "dna_sequence": "ATGAAAAAACGCTTTATTTATCACGATGAAAAATCGAATAAATTTTGGTGGATAGATTACGAAGGGGATAGTTTAGCTGTCAACTATGGCAAGGTAGGTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGATCGCTACTATTTTGATGATGAAGAAATTGGGTTACATGTTAAAACGTCACACCCAAACTTCCAGTGCCATTTTACTGATCCACTTTATATGTGTTGCTGGGATGAAGAATCTCCTTTTGGCAGCGATGAAGGTGCTGATGCTCTAAACGTTCTTGAAAATAGCCTCCGTAAAGAGCCGGATCTGGACTGTGCTGATTTCCCTCAAATGTTAATTGAAACTATGTGGGGTATGAAATACATCGCTATGGACAGTATTCTTGAAGAGGATGTTCGTGCGCAATTACTAGTCGATGAAATGAGCACTATCCAGAGCAATATGATTACCTACGCAACTGCATTCGGTCAGATTAAAGTCATGGGTAAAATCTCCCATAAACTTAAAAAGATGGGACTCAATGCACTAGCGCGTCATCAGCTTACCGCAAAAATTCTTCAATGGGGTGACGGTCAGGACTCACCAATACTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAA", + "dna_sequence_length": 735, + "functions": [ + "WGR domain protein" + ], + "id": "CDS_2400", + "location": [ + [ + "NC_000913", + 2537749, + "+", + 735 + ] + ], + "md5": "cd85b2223cbc5b9f4b0bbc7e973b19b7", + "parent_gene": "", + "protein_md5": "50628d3728e7f0bb038d81c553202a46", + "protein_translation": "MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007982" + ], + [ + "gene_synonym", + "ECK2416" + ], + [ + "gene_synonym", + "EcoGene:EG10193" + ], + [ + "gene_synonym", + "GI:16130347" + ], + [ + "gene_synonym", + "GeneID:946888" + ], + [ + "gene_synonym", + "JW2414" + ], + [ + "gene_synonym", + "NP_416916.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16703" + ], + [ + "gene_synonym", + "b2421" + ], + [ + "gene_synonym", + "cysM" + ] + ], + "dna_sequence": "GTGAGTACATTAGAACAAACAATAGGCAATACGCCTCTGGTGAAGTTGCAGCGAATGGGGCCGGATAACGGCAGTGAAGTGTGGTTAAAACTGGAAGGCAATAACCCGGCAGGTTCGGTGAAAGATCGTGCGGCACTTTCGATGATCGTCGAGGCGGAAAAGCGCGGGGAAATTAAACCGGGTGATGTCTTAATCGAAGCCACCAGTGGTAACACCGGCATTGCGCTGGCAATGATTGCCGCGCTGAAAGGCTATCGCATGAAATTGCTGATGCCCGACAACATGAGCCAGGAACGCCGTGCGGCGATGCGTGCTTATGGTGCGGAACTGATTCTTGTCACCAAAGAGCAGGGCATGGAAGGTGCGCGCGATCTGGCGCTGGAGATGGCGAATCGTGGCGAAGGAAAGCTGCTCGATCAGTTCAATAATCCCGATAACCCTTATGCGCATTACACCACCACTGGGCCGGAAATCTGGCAGCAAACCGGCGGGCGCATCACTCATTTTGTCTCCAGCATGGGGACGACCGGCACTATCACCGGCGTCTCACGCTTTATGCGCGAACAATCCAAACCGGTGACCATTGTCGGCCTGCAACCGGAAGAGGGCAGCAGCATTCCCGGCATTCGCCGCTGGCCTACGGAATATCTGCCGGGGATTTTCAACGCTTCTCTGGTGGATGAGGTGCTGGATATTCATCAGCGCGATGCGGAAAACACCATGCGCGAACTGGCGGTGCGGGAAGGAATATTCTGTGGCGTCAGCTCCGGCGGCGCGGTTGCCGGAGCACTGCGGGTGGCAAAAGCTAACCCTGACGCGGTGGTGGTGGCGATCATCTGCGATCGTGGCGATCGCTACCTTTCTACCGGGGTGTTTGGGGAAGAGCATTTTAGCCAGGGGGCGGGGATTTAA", + "dna_sequence_length": 912, + "functions": [ + "cysteine synthase B (O-acetylserine sulfhydrolase B)" + ], + "id": "CDS_2401", + "location": [ + [ + "NC_000913", + 2539583, + "-", + 912 + ] + ], + "md5": "f046b6c73a0c0c7970e9eee704caad06", + "parent_gene": "", + "protein_md5": "411405b610696c93d210c34800289bf8", + "protein_translation": "MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDAVVVAIICDRGDRYLSTGVFGEEHFSQGAGI", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007986" + ], + [ + "gene_synonym", + "ECK2417" + ], + [ + "gene_synonym", + "EcoGene:EG10183" + ], + [ + "gene_synonym", + "GI:16130348" + ], + [ + "gene_synonym", + "GeneID:946889" + ], + [ + "gene_synonym", + "JW2415" + ], + [ + "gene_synonym", + "NP_416917.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16676" + ], + [ + "gene_synonym", + "b2422" + ], + [ + "gene_synonym", + "cysA" + ] + ], + "dna_sequence": "ATGAGCATTGAGATTGCCAATATTAAGAAGTCGTTTGGTCGCACCCAGGTGCTGAACGATATCTCACTGGATATTCCTTCAGGTCAGATGGTCGCGTTGCTGGGGCCGTCCGGTTCCGGGAAAACCACGCTGCTGCGCATTATCGCCGGGCTGGAGCATCAAACCAGCGGGCATATTCGCTTCCACGGCACCGACGTGAGCCGCCTGCACGCACGTGATCGTAAAGTCGGTTTCGTGTTCCAGCATTACGCGCTGTTCCGCCATATGACGGTGTTCGACAATATCGCTTTTGGCCTGACGGTGCTGCCGCGTCGCGAGCGCCCGAATGCCGCAGCCATCAAAGCGAAAGTGACAAAATTGCTGGAAATGGTCCAGCTTGCCCATCTGGCGGATCGTTATCCGGCGCAGCTTTCCGGCGGCCAGAAACAGCGCGTGGCGCTGGCGCGCGCGCTGGCTGTGGAACCGCAAATTCTGCTGCTTGATGAACCGTTTGGCGCGCTGGATGCGCAGGTGCGTAAAGAGCTGCGTCGCTGGCTGCGTCAACTCCATGAAGAACTAAAATTCACCAGCGTTTTTGTGACCCACGATCAGGAAGAAGCGACCGAAGTAGCTGATCGTGTAGTTGTGATGAGCCAGGGCAATATTGAACAGGCTGACGCGCCGGATCAGGTATGGCGCGAACCGGCGACCCGTTTTGTGCTCGAATTTATGGGCGAAGTGAACCGCCTGCAGGGAACCATTCGCGGCGGGCAGTTCCATGTTGGCGCGCATCGCTGGCCGCTGGGCTACACACCTGCGTATCAGGGGCCGGTGGATCTCTTCCTGCGCCCTTGGGAAGTGGATATCAGCCGCCGTACCAGCCTCGATTCGCCGCTGCCGGTACAGGTACTGGAAGCCAGCCCGAAAGGTCACTACACCCAATTAGTGGTGCAGCCGCTGGGGTGGTACAACGAACCGCTGACGGTCGTGATGCATGGCGACGATGCCCCGCAGCGTGGCGAGCGTTTATTCGTTGGTCTGCAACATGCGCGGCTGTATAACGGCGACGAGCGTATCGAAACCCGCGATGAGGAACTTGCTCTCGCACAAAGCGCCTGA", + "dna_sequence_length": 1098, + "functions": [ + "sulfate/thiosulfate transporter subunit" + ], + "id": "CDS_2402", + "location": [ + [ + "NC_000913", + 2540814, + "-", + 1098 + ] + ], + "md5": "450a23be631fff69a07fac38017210fd", + "parent_gene": "", + "protein_md5": "eebe6746730e1289ce3d1cce1159eed6", + "protein_translation": "MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGERLFVGLQHARLYNGDERIETRDEELALAQSA", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007988" + ], + [ + "gene_synonym", + "ECK2418" + ], + [ + "gene_synonym", + "EcoGene:EG10198" + ], + [ + "gene_synonym", + "GI:90111430" + ], + [ + "gene_synonym", + "GeneID:2847743" + ], + [ + "gene_synonym", + "JW2416" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEB0" + ], + [ + "gene_synonym", + "YP_026168.2" + ], + [ + "gene_synonym", + "b2423" + ], + [ + "gene_synonym", + "cysW" + ] + ], + "dna_sequence": "ATGGCGGAAGTTACCCAATTGAAGCGTTATGACGCGCGCCCGATTAACTGGGGCAAATGGTTTCTGATTGGCATCGGGATGCTGGTTTCGGCGTTCATCCTGCTGGTGCCGATGATTTACATCTTCGTGCAGGCATTCAGCAAGGGGCTGATGCCGGTTTTACAGAATCTGGCCGATCCGGACATGCTGCACGCCATCTGGCTGACGGTGATGATCGCGCTGATTGCCGTACCGGTAAACCTGGTGTTCGGCATTCTGCTGGCCTGGCTGGTGACGCGCTTTAACTTCCCTGGACGCCAGTTACTGCTGACGCTACTGGACATTCCGTTTGCCGTATCGCCGGTGGTTGCCGGTCTGGTGTATTTGCTGTTCTACGGCTCTAACGGCCCGCTCGGCGGTTGGCTCGACGAGCATAACCTGCAAATTATGTTCTCCTGGCCGGGAATGGTGCTGGTCACCATCTTCGTGACGTGTCCGTTTGTGGTGCGCGAACTGGTGCCGGTGATGTTAAGCCAGGGCAGCCAGGAAGACGAAGCGGCGATTTTGCTTGGCGCGTCCGGCTGGCAGATGTTCCGTCGCGTCACATTACCGAACATCCGCTGGGCGCTGCTTTATGGCGTGGTGTTGACCAACGCCCGCGCAATTGGCGAGTTTGGCGCGGTGTCGGTGGTTTCCGGCTCGATTCGCGGCGAAACCCTGTCGCTGCCGTTACAGATTGAATTGCTGGAGCAGGACTACAACACCGTCGGCTCCTTTACCGCTGCGGCGCTGTTAACGCTGATGGCGATTATCACCCTGTTTTTAAAAAGTATGTTGCAGTGGCGCCTGGAGAATCAGGAAAAACGCGCACAGCAGGAGGAACATCATGAGCATTGA", + "dna_sequence_length": 876, + "functions": [ + "sulfate/thiosulfate ABC transporter permease" + ], + "id": "CDS_2403", + "location": [ + [ + "NC_000913", + 2541679, + "-", + 876 + ] + ], + "md5": "9626f0e5552da5f5bf61355c71a57e08", + "parent_gene": "", + "protein_md5": "ded884cbdc1ad9162fd1f7548b7f6267", + "protein_translation": "MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007990" + ], + [ + "gene_synonym", + "ECK2419" + ], + [ + "gene_synonym", + "EcoGene:EG10197" + ], + [ + "gene_synonym", + "GI:16130349" + ], + [ + "gene_synonym", + "GeneID:946882" + ], + [ + "gene_synonym", + "JW2417" + ], + [ + "gene_synonym", + "NP_416919.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16701" + ], + [ + "gene_synonym", + "b2424" + ], + [ + "gene_synonym", + "cysT" + ], + [ + "gene_synonym", + "cysU" + ] + ], + "dna_sequence": "ATGTTTGCTGTCTCCTCCAGACGCGTGCTGCCGGGCTTTACCTTAAGCCTCGGCACCAGTCTGCTGTTTGTGTGCCTGATTTTGCTGCTGCCGCTCTCCGCGCTGGTGATGCAACTGGCCCAGATGAGCTGGGCGCAGTACTGGGAGGTGATCACCAACCCGCAGGTGGTCGCGGCCTACAAAGTAACGCTGCTGTCGGCGTTTGTGGCATCGATTTTTAACGGCGTTTTCGGTCTGCTGATGGCGTGGATCCTAACCCGCTATCGCTTCCCAGGCCGCACGCTGCTTGATGCGCTGATGGATTTACCCTTTGCGCTGCCAACGGCTGTCGCCGGTTTAACGCTGGCCTCGCTCTTTTCCGTAAACGGTTTTTACGGTGAATGGCTGGCGAAGTTTGATATCAAAGTCACCTATACATGGCTGGGGATTGCGGTGGCTATGGCCTTTACCAGCATTCCGTTTGTGGTGCGTACCGTGCAGCCGGTGCTGGAAGAGTTAGGCCCGGAATATGAAGAAGCGGCGGAAACGCTTGGTGCAACGCGCTGGCAGAGTTTCTGCAAAGTGGTGCTGCCGGAGCTTTCTCCGGCGCTGGTGGCGGGCGTGGCGCTGTCGTTTACCCGTAGTCTTGGTGAATTTGGCGCGGTGATTTTTATCGCCGGAAATATCGCGTGGAAGACGGAAGTGACGTCGCTGATGATTTTTGTGCGCTTACAGGAGTTTGATTACCCGGCAGCGAGCGCGATTGCTTCGGTGATCCTCGCGGCATCTCTGCTGCTGCTGTTCTCAATTAACACTCTGCAAAGTCGCTTTGGTCGGCGTGTGGTAGGTCATTAA", + "dna_sequence_length": 834, + "functions": [ + "sulfate/thiosulfate ABC transporter permease" + ], + "id": "CDS_2404", + "location": [ + [ + "NC_000913", + 2542512, + "-", + 834 + ] + ], + "md5": "86a234077a9c4a99fc22b24f13e15a7b", + "parent_gene": "", + "protein_md5": "10f1a1a47a2b2b016072c5e3bb34b0ad", + "protein_translation": "MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007992" + ], + [ + "gene_synonym", + "ECK2420" + ], + [ + "gene_synonym", + "EcoGene:EG10195" + ], + [ + "gene_synonym", + "GI:16130350" + ], + [ + "gene_synonym", + "GeneID:946883" + ], + [ + "gene_synonym", + "JW2418" + ], + [ + "gene_synonym", + "NP_416920.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16700" + ], + [ + "gene_synonym", + "b2425" + ], + [ + "gene_synonym", + "cysP" + ] + ], + "dna_sequence": "ATGGCCGTTAACTTACTGAAAAAGAACTCACTCGCGCTGGTCGCTTCTCTGCTGCTGGCGGGCCATGTACAGGCAACGGAACTGCTGAACAGTTCTTATGACGTCTCCCGCGAGCTGTTTGCCGCCCTGAATCCGCCGTTTGAGCAACAATGGGCAAAAGATAACGGCGGCGACAAACTGACGATAAAACAATCTCATGCCGGGTCATCAAAACAGGCGCTGGCGATTTTACAGGGCTTAAAAGCCGACGTTGTCACTTATAACCAGGTGACCGACGTACAAATCCTGCACGATAAAGGCAAGCTGATCCCGGCCGACTGGCAGTCGCGCCTGCCGAATAATAGCTCGCCGTTCTACTCCACCATGGGCTTCCTGGTGCGTAAGGGTAACCCGAAGAATATCCACGATTGGAACGACCTGGTGCGCTCCGACGTGAAGCTGATTTTCCCGAACCCGAAAACGTCGGGTAACGCGCGTTATACCTATCTGGCGGCATGGGGCGCAGCGGATAAAGCTGACGGTGGTGACAAAGGCAAAACCGAACAGTTTATGACCCAGTTCCTGAAAAACGTTGAAGTGTTCGATACTGGCGGTCGTGGCGCGACCACCACTTTTGCCGAGCGCGGCCTGGGCGATGTGCTGATTAGCTTCGAATCGGAAGTGAACAACATCCGTAAACAGTATGAAGCGCAGGGCTTTGAAGTGGTGATTCCGAAAACCAACATTCTGGCGGAATTCCCGGTGGCGTGGGTTGATAAAAACGTGCAGGCCAACGGTACGGAAAAAGCCGCCAAAGCCTATCTGAACTGGCTCTATAGCCCGCAGGCGCAAACCATCATCACCGACTATTACTACCGCGTGAATAACCCGGAGGTGATGGACAAACTGAAAGACAAATTCCCGCAGACCGAGCTGTTCCGCGTGGAAGACAAATTTGGCTCCTGGCCGGAAGTGATGAAAACCCACTTCACCAGCGGCGGCGAGTTAGACAAGCTGTTAGCGGCGGGGCGTAACTGA", + "dna_sequence_length": 1017, + "functions": [ + "thiosulfate-binding protein" + ], + "id": "CDS_2405", + "location": [ + [ + "NC_000913", + 2543528, + "-", + 1017 + ] + ], + "md5": "cee13e4d1a5f56de195b82aac990186c", + "parent_gene": "", + "protein_md5": "480a37ce631a4078d4ba92298c3e15e1", + "protein_translation": "MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007996" + ], + [ + "gene_synonym", + "ECK2421" + ], + [ + "gene_synonym", + "EcoGene:EG12133" + ], + [ + "gene_synonym", + "GI:90111431" + ], + [ + "gene_synonym", + "GeneID:946898" + ], + [ + "gene_synonym", + "JW5394" + ], + [ + "gene_synonym", + "NP_416921.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37440" + ], + [ + "gene_synonym", + "b2426" + ], + [ + "gene_synonym", + "ucpA" + ], + [ + "gene_synonym", + "yfeF" + ] + ], + "dna_sequence": "ATGGGTAAACTCACGGGCAAGACAGCACTGATTACGGGCGCATTGCAGGGAATTGGCGAAGGAATTGCCAGAACTTTTGCACGTCATGGCGCGAACCTAATCTTGCTGGATATCTCCCCTGAGATCGAAAAGCTGGCGGACGAACTGTGTGGTCGTGGTCATCGCTGTACGGCGGTTGTCGCCGATGTGCGTGACCCGGCGTCGGTAGCCGCAGCTATCAAACGCGCGAAGGAAAAAGAAGGGCGCATTGATATCCTGGTGAATAACGCAGGCGTTTGTCGTCTGGGCAGTTTCCTCGATATGAGCGATGACGATCGCGATTTCCATATTGACATCAATATTAAAGGCGTATGGAACGTCACGAAGGCGGTGCTGCCGGAGATGATTGCCCGCAAAGATGGTCGCATTGTGATGATGTCTTCAGTCACTGGTGATATGGTGGCCGATCCTGGCGAAACGGCGTACGCCTTAACGAAAGCGGCGATTGTTGGCCTGACAAAATCGCTGGCGGTGGAGTACGCGCAGTCTGGTATTCGCGTTAACGCCATTTGCCCGGGATACGTGCGCACACCAATGGCGGAAAGCATTGCCCGCCAGTCGAACCCGGAAGATCCAGAGTCGGTGCTGACTGAAATGGCGAAAGCAATCCCGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGATGAATCCAGCTATTTAACCGGTACACAGAATGTGATTGATGGCGGCAGCACACTGCCGGAGACGGTTAGCGTCGGTATCTGA", + "dna_sequence_length": 792, + "functions": [ + "furfural resistance protein, putative short-chain oxidoreductase" + ], + "id": "CDS_2406", + "location": [ + [ + "NC_000913", + 2544623, + "-", + 792 + ] + ], + "md5": "3dae894a52f820b3b8dbb35ff3f79eec", + "parent_gene": "", + "protein_md5": "5c51b9de041df249451496766b6b5469", + "protein_translation": "MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008000" + ], + [ + "gene_synonym", + "ECK2422" + ], + [ + "gene_synonym", + "EcoGene:EG14161" + ], + [ + "gene_synonym", + "GI:16130352" + ], + [ + "gene_synonym", + "GeneID:946568" + ], + [ + "gene_synonym", + "JW2420" + ], + [ + "gene_synonym", + "NP_416922.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77245" + ], + [ + "gene_synonym", + "b2427" + ], + [ + "gene_synonym", + "murR" + ], + [ + "gene_synonym", + "yfeT" + ] + ], + "dna_sequence": "ATGTTGTACCTGACGAAAATAAGCAATGCGGGGAGTGAATTCACCGAAAACGAGCAAAAAATCGCTGACTTTCTGCAGGCCAACGTGAGTGAGCTGCAATCCGTTTCTTCACGGCAGATGGCGAAACAGCTCGGCATTAGCCAGTCGAGCATAGTGAAATTTGCCCAAAAACTCGGCGCGCAAGGATTTACTGAATTGCGTATGGCGTTAATAGGCGAATACAGTGCCAGCCGGGAGAAAACGAATGCCACGGCACTGCACCTGCACAGTTCGATTACCAGTGATGATTCGCTGGAAGTGATCGCGCGCAAACTGAATCGCGAAAAAGAGCTGGCGCTGGAGCAAACCTGCGCGTTGCTCGATTACGCGCGGCTGCAAAAAATCATTGAGGTCATCAGTAAAGCACCGTTTATCCAGATAACGGGCCTGGGCGGATCGGCGCTGGTGGGGCGCGATCTGTCGTTCAAACTGATGAAAATTGGCTATCGCGTGGCCTGCGAAGCCGACACGCACGTACAAGCCACCGTTTCTCAGGCGTTGAAAAAAGGCGATGTACAAATCGCTATCTCTTACAGCGGCAGTAAAAAAGAGATTGTCTTGTGCGCAGAAGCGGCACGAAAGCAGGGGGCAACGGTGATTGCCATTACTTCTCTGACTGACTCTCCGCTGCGGCGGCTGGCGCATTTCACCCTCGATACCGTTTCCGGAGAAACCGAATGGCGTAGCTCGTCGATGTCTACCCGCACGGCGCAAAATTCTGTTACCGATTTACTGTTTGTTGGCCTTGTGCAACTCAATGATGTGGAGTCATTGAAAATGATTCAGCGCAGCAGTGAGCTAACACAACGCCTGAAATGA", + "dna_sequence_length": 858, + "functions": [ + "repressor for murPQ, MurNAc 6-P inducible" + ], + "id": "CDS_2407", + "location": [ + [ + "NC_000913", + 2545609, + "-", + 858 + ] + ], + "md5": "801d389beeba69eaf495c38ccc535fbf", + "parent_gene": "", + "protein_md5": "b46f10ef56added92a63b1b09f0f6dac", + "protein_translation": "MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008007" + ], + [ + "gene_synonym", + "ECK2423" + ], + [ + "gene_synonym", + "EcoGene:EG14162" + ], + [ + "gene_synonym", + "GI:16130353" + ], + [ + "gene_synonym", + "GeneID:946893" + ], + [ + "gene_synonym", + "JW2421" + ], + [ + "gene_synonym", + "NP_416923.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76535" + ], + [ + "gene_synonym", + "b2428" + ], + [ + "gene_synonym", + "murQ" + ], + [ + "gene_synonym", + "yfeU" + ] + ], + "dna_sequence": "ATGCAATTTGAAAAGATGATTACTGAAGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGACGCTGGAAATGTGCCGGATTATCAACGATGAAGATAAAACCGTACCGCTTGCCGTTGAGCGCGTACTGCCGGATATCGCCGCGGCGATCGATGTTATCCACGCCCAGGTAAGCGGCGGCGGGCGTCTGATTTACCTCGGTGCGGGAACATCCGGTCGTCTGGGGATTCTGGATGCCAGCGAATGTCCGCCCACCTACGGCGTGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTAATGATCTGAAAAATATTAATTTAACGGCACAGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGCCACCAACGAAAAACTGCATGTGCGACAGGTCAATATTGTTAAAAACGCCACCGGATGTAGCGCAGAGCAAGCGGAAGCGGCGTTAATTGCTTGCGAGCGCAACTGTAAAACGGCCATTGTGATGGTGCTGAAAAATCTCGATGCCGCAGAAGCTAAAAAACGCCTGGATCAACACGGCGGCTTTATTCGTCAGGTTTTAGACAAGGAATAA", + "dna_sequence_length": 897, + "functions": [ + "N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase" + ], + "id": "CDS_2408", + "location": [ + [ + "NC_000913", + 2545773, + "+", + 897 + ] + ], + "md5": "beadd096aa8a855acbfcf8f902bc3c7a", + "parent_gene": "", + "protein_md5": "12246a5d4fc09952c26e955b8965a4f5", + "protein_translation": "MQFEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERVLPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGKVFGNLMVDVVATNEKLHVRQVNIVKNATGCSAEQAEAALIACERNCKTAIVMVLKNLDAAEAKKRLDQHGGFIRQVLDKE", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008009" + ], + [ + "gene_synonym", + "ECK2424" + ], + [ + "gene_synonym", + "EcoGene:EG14163" + ], + [ + "gene_synonym", + "GI:16130354" + ], + [ + "gene_synonym", + "GeneID:946894" + ], + [ + "gene_synonym", + "JW2422" + ], + [ + "gene_synonym", + "NP_416924.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77272" + ], + [ + "gene_synonym", + "b2429" + ], + [ + "gene_synonym", + "murP" + ], + [ + "gene_synonym", + "yfeV" + ] + ], + "dna_sequence": "ATGGCCAAAGAGATCAGCAGTGAACTTCTGAACACCATTCTTACCCGTGTCGGCGGACCGGGAAATATCGCCAGTTGTGGTAACTGTATGACGCGCCTGCGTCTGGGTGTACATGACAGTTCACTGGTTGATCCCAATATCAAAACGCTGGAAGGCGTGAAGGGCGTCATTTTGACCAGCGACCAGGTGCAGGTCGTTTTTGGGCCTGGTAAAGCGCATCGTGCCGCAAAAGCGATGAGCGAGCTGCTGGGAGAAGCACCGGTACAGGATGCCGCAGAAATCGCCGCCCAGAACAAACGTCAGTTAAAAGCCAAACAAACCTCCGGCGTGCAACAATTTCTCGCCAAATTCGCCACCATCTTCACGCCGCTGATCCCCGGTTTTATTGCCGCCGGTCTGCTGCTGGGGATAGCGACGTTAATTGCCACGGTGATGCACGTTCCGGCAGATGCTCAGGGAACACTACCCGATGCGCTGAATTTTATGAAGGTGTTCAGCAAAGGTTTGTTCACTTTCCTGGTGATTCTGGTGGGCTATAACGCCGCCCAGGCATTTGGCGGCACGGGCGTAAATGGCGCAATTATCGCCGCGCTCTTTTTGCTCGGTTATAACCCCGCAGCGACCACCGGTTACTACGCCGGTTTTCACGATTTCTTTGGTCTGCCCATCGATCCGCGCGGCAATATTATCGGCGTGCTGATTGCCGCGTGGGCCTGCGCCCGCATTGAAGGCATGGTGCGCCGCTTTATGCCGGACGATCTCGACATGCTGCTGACCTCGTTAATCACCCTGCTGATCACCGCTACGCTTGCGTACCTGATCATTATGCCGCTGGGTGGCTGGTTATTCGAAGGTATGTCATGGCTGTTTATGCACCTGAACAGTAATCCGTTCGGTTGTGCGGTTTTAGCCGGGCTGTTCCTGATCGCCGTGGTATTTGGCGTGCATCAGGGCTTTATTCCTGTTTACCTCGCGTTAATGGACAGCCAGGGATTCAACAGCTTATTTCCCATCCTTTCAATGGCAGGCGCGGGCCAGGTGGGCGCGGCGCTGGCACTCTACTGGCGGGCGCAACCGCACAGTGCGCTACGCAGTCAGGTACGCGGGGCGATTATTCCCGGCCTGCTGGGCGTTGGTGAACCGCTGATTTACGGTGTCACCCTGCCCCGCATGAAGCCGTTTGTTACCGCCTGTTTAGGCGGCGCGGCGGGCGGTTTGTTTATCGGCCTGATAGCCTGGTGGGGTCTGCCGATGGGCTTAAACAGCGCCTTTGGGCCGTCTGGTCTGGTAGCGCTGCCGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTATTTTCACCACGCTCTTTGGCTGCCGTAACGTCAATCTGGACTGA", + "dna_sequence_length": 1425, + "functions": [ + "N-acetylmuramic acid permease, EIIBC component, PTS system" + ], + "id": "CDS_2409", + "location": [ + [ + "NC_000913", + 2546673, + "+", + 1425 + ] + ], + "md5": "03720efd80a95ac9aaaf9567a873f8c4", + "parent_gene": "", + "protein_md5": "bedd03002b8cc4f2c282bc01f83c4ff2", + "protein_translation": "MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPNIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNLD", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008012" + ], + [ + "gene_synonym", + "ECK2425" + ], + [ + "gene_synonym", + "EcoGene:EG14164" + ], + [ + "gene_synonym", + "GI:90111432" + ], + [ + "gene_synonym", + "GeneID:946907" + ], + [ + "gene_synonym", + "JW5395" + ], + [ + "gene_synonym", + "NP_416925.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77619" + ], + [ + "gene_synonym", + "b2430" + ], + [ + "gene_synonym", + "pbp4B" + ], + [ + "gene_synonym", + "yfeW" + ] + ], + "dna_sequence": "ATGAAACGGACAATGCTCTATCTTTCTCTGCTGGCTGTTAGTTGTAGCGTCAGCGCCGCAAAATACCCTGTTCTGACAGAAAGCTCGCCAGAGAAAGCAGGGTTTAACGTCGAACGGCTTAACCAGATGGATCGCTGGATTAGCCAGCAAGTTGATGTCGGTTATCCCAGCGTAAACCTGCTGATCATTAAAGATAATCAGATTGTGTATCGCAAAGCCTGGGGAGCGGCGAAAAAGTACGATGGCAGCGTGTTGATGGAACAGCCTGTCAAAGCCACCACCGGGACGCTGTATGACCTGGCCTCAAACACCAAAATGTACGCCACGAACTTCGCCCTGCAAAAGCTGATGAGCGAAGGCAAACTGCATCCTGACGATCGGATTGCGAAATATATTCCGGGGTTTGCCGATAGTCCAAATGACACCATTAAAGGCAAAAACACCCTGCGGATTTCTGACCTGCTGCATCACAGCGGCGGTTTCCCGGCAGATCCGCAATACCCGAATAAAGCGGTCGCGGGCGCGTTATATTCCCAGGATAAAGGCCAGACGCTGGAGATGATCAAGCGCACGCCGCTGGAATATCAGCCCGGCAGCAAACATATCTACAGCGATGTCGATTATATGCTGCTTGGATTTATCGTCGAGTCGGTTACCGGTCAGCCGCTTGACCGCTATGTTGAAGAGTCGATTTATCGCCCGCTCGGCCTGACACATACGGTATTTAACCCGCTGCTGAAAGGCTTTAAACCGCAACAAATTGCCGCCACGGAATTGAACGGCAATACCCGCGATGGCGTGATCCATTTCCCGAATATCCGCACCTCCACTCTCTGGGGTCAGGTGCACGATGAAAAAGCCTTTTATTCGATGGGCGGCGTTTCCGGGCACGCAGGTTTGTTTTCCAATACCGGCGATATTGCGGTGTTAATGCAAACGATGCTGAACGGCGGGGGCTATGGTGATGTGCAGCTGTTCAATGCGGAAACGGTGAAGATGTTCACCACCAGCTCTAAGGAAGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAA", + "dna_sequence_length": 1305, + "functions": [ + "penicillin binding protein PBP4B", + "weak DD-carboxypeptidase activity" + ], + "id": "CDS_2410", + "location": [ + [ + "NC_000913", + 2548102, + "+", + 1305 + ] + ], + "md5": "6d3bd7b4e4a46258a0ab563a127e1e58", + "parent_gene": "", + "protein_md5": "d3f02c5493f8927d19b932ad13d2c154", + "protein_translation": "MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008015" + ], + [ + "gene_synonym", + "ECK2426" + ], + [ + "gene_synonym", + "EcoGene:EG14165" + ], + [ + "gene_synonym", + "GI:90111433" + ], + [ + "gene_synonym", + "GeneID:946913" + ], + [ + "gene_synonym", + "JW2424" + ], + [ + "gene_synonym", + "NP_416926.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76536" + ], + [ + "gene_synonym", + "b2431" + ], + [ + "gene_synonym", + "yfeX" + ] + ], + "dna_sequence": "ATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAACATTGCCGCGCGGCGATTTGGATCGAAGCCAACGTGAAAGGGGAAGTTGACGCCCTGCGTGCGGCCAGTAAAACATTTGCCGACAAACTGGCAACTTTTGAAGCGAAATTCCCGGACGCGCATCTTGGTGCGGTGGTTGCCTTTGGTAACAACACCTGGCGCGCTCTGAGCGGCGGCGTTGGGGCAGAAGAGCTGAAAGATTTTCCGGGCTACGGTAAAGGCCTTGCGCCGACGACCCAGTTCGATGTGTTGATCCACATTCTTTCTCTGCGTCACGACGTAAACTTCTCTGTCGCCCAGGCGGCGATGGAAGCCTTTGGTGACTGCATTGAAGTGAAAGAAGAGATCCACGGCTTCCGTTGGGTTGAAGAGCGTGACCTGAGCGGCTTTGTTGACGGTACGGAAAACCCGGCGGGTGAAGAGACGCGTCGCGAAGTGGCGGTTATCAAAGACGGCGTGGATGCGGGCGGCAGCTATGTGTTTGTCCAGCGTTGGGAACACAACCTGAAGCAGCTCAACCGGATGAGCGTTCACGATCAGGAGATGGTGATCGGGCGCACCAAAGAGGCCAACGAAGAGATCGACGGCGACGAACGTCCGGAAACCTCTCACCTCACCCGCGTTGATCTGAAAGAAGATGGCAAAGGGCTGAAGATTGTTCGCCAGAGCCTGCCGTACGGCACTGCCAGTGGCACTCACGGTCTGTACTTCTGCGCCTACTGCGCGCGTCTGCATAACATTGAGCAGCAACTGCTGAGCATGTTTGGCGATACCGATGGTAAGCGTGATGCGATGTTGCGTTTCACCAAACCGGTAACCGGCGGCTATTATTTCGCACCGTCGCTGGACAAGTTGATGGCGCTGTAA", + "dna_sequence_length": 900, + "functions": [ + "porphyrinogen oxidase, cytoplasmic" + ], + "id": "CDS_2411", + "location": [ + [ + "NC_000913", + 2550545, + "-", + 900 + ] + ], + "md5": "be3b81cc6b9a3ecfcfa4b4d2ae9a5a95", + "parent_gene": "", + "protein_md5": "bbea8af71654ac8a0057b60449e7f1ff", + "protein_translation": "MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008017" + ], + [ + "gene_synonym", + "ECK2427" + ], + [ + "gene_synonym", + "EcoGene:EG14166" + ], + [ + "gene_synonym", + "GI:16130357" + ], + [ + "gene_synonym", + "GeneID:946919" + ], + [ + "gene_synonym", + "JW2425" + ], + [ + "gene_synonym", + "NP_416927.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76537" + ], + [ + "gene_synonym", + "b2432" + ], + [ + "gene_synonym", + "yfeY" + ] + ], + "dna_sequence": "ATGAAATCGCTGCGTTTAATGTTATGCGCTATGCCATTGATGCTGACCGGCTGTTCCACGATGTCGTCAGTTAACTGGTCTGCCGCTAACCCGTGGAACTGGTTTGGGTCGTCCACCAAAGTGAGCGAGCAGGGCGTGGGTGAATTAACGGCGTCCACACCACTGCAAGAACAAGCCATTGCCGATGCGCTTGATGGCGATTATCGCCTGCGCAGCGGAATGAAAACCGCGAACGGCAACGTGGTGCGCTTTTTTGAAGTGATGAAGGGCGACAACGTGGCGATGGTGATTAACGGCGATCAAGGCACGATCAGTCGCATTGACGTGCTGGATAGCGATATTCCTGCTGACACCGGTGTTAAAATCGGTACACCGTTTAGCGACCTTTACAGCAAAGCATTTGGCAATTGCCAAAAAGCTGATGGTGATGATAATCGTGCCGTCGAATGTAAAGCCGAAGGCAGTCAACATATTAGCTACCAGTTCAGCGGGGAATGGCGTGGTCCTGAAGGGTTAATGCCTTCGGACGATACCCTGAAAAACTGGAAAGTCAGTAAAATTATCTGGCGGCGTTAA", + "dna_sequence_length": 576, + "functions": [ + "RpoE-regulated lipoprotein" + ], + "id": "CDS_2412", + "location": [ + [ + "NC_000913", + 2551216, + "-", + 576 + ] + ], + "md5": "a6dfb493e2ea2d3bcd811ecd06544661", + "parent_gene": "", + "protein_md5": "cdcea2e903168b78e3f87e53f7d17c13", + "protein_translation": "MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008023" + ], + [ + "gene_synonym", + "ECK2428" + ], + [ + "gene_synonym", + "EcoGene:EG14167" + ], + [ + "gene_synonym", + "GI:90111434" + ], + [ + "gene_synonym", + "GeneID:946918" + ], + [ + "gene_synonym", + "JW2426" + ], + [ + "gene_synonym", + "NP_416928.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76538" + ], + [ + "gene_synonym", + "b2433" + ], + [ + "gene_synonym", + "yfeZ" + ] + ], + "dna_sequence": "ATGAAGAGTACTGAGTTTCATCCTGTCCATTATGATGCGCACGGTCGCCTGCGTTTACCCTTGCTCTTCTGGCTTGTGCTATTGCTTCAGGCGCGAACCTGGGTGCTGTTTGTCATTGCCGGTGCGTCGCGCGAGCAGGGTACTGCGCTGCTAAATCTGTTTTATCCCGATCACGATAATTTCTGGCTGGGGCTGATTCCTGGCATTCCGGCGGTGCTGGCGTTTTTGTTGAGCGGTCGGCGGGCTACGTTTCCTCGCACCTGGCGTGTACTCTATTTTCTGTTGCTGTTGGCGCAGGTGGTTTTACTTTGCTGGCAACCGTGGCTGTGGCTGAACGGTGAATCCGTTAGCGGTATCGGTCTGGCGCTGGTAGTGGCGGATATTGTGGCGTTAATCTGGCTGCTGACCAATCGACGTTTACGCGCTTGTTTTTATGAAGTAAAAGAATAA", + "dna_sequence_length": 450, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_2413", + "location": [ + [ + "NC_000913", + 2551726, + "-", + 450 + ] + ], + "md5": "a3b1112e6a276ddbe16254c72b225808", + "parent_gene": "", + "protein_md5": "6666f3efa941086340a83ee2e50c9ebf", + "protein_translation": "MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFYEVKE", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008028" + ], + [ + "gene_synonym", + "ECK2429" + ], + [ + "gene_synonym", + "EcoGene:EG14168" + ], + [ + "gene_synonym", + "GI:90111435" + ], + [ + "gene_synonym", + "GeneID:946917" + ], + [ + "gene_synonym", + "JW2427" + ], + [ + "gene_synonym", + "NP_416929.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76539" + ], + [ + "gene_synonym", + "b2434" + ], + [ + "gene_synonym", + "ypeA" + ] + ], + "dna_sequence": "ATGGAGATACGCGTATTTCGCCAGGAAGATTTCGAAGAGGTCATCACCCTTTGGGAGCGTTGCGACTTGCTGCGTCCGTGGAACGATCCGGAAATGGACATCGAGCGTAAGATGAACCATGACGTCAGTTTGTTTTTGGTCGCTGAGGTAAACGGTGACGTGGTCGGAACGGTGATGGGCGGTTATGACGGGCATCGCGGGTCTGCTTATTATCTTGGCGTGCATCCAGAGTTTCGTGGGCGTGGGATTGCCAATGCGTTGCTTAATCGGCTGGAGAAAAAGCTGATTGCTCGTGGCTGCCCGAAAATTCAGATCAATGTGCCGGAAGATAACGACATGGTGCTCGGAATGTATGAACGCCTGGGATATGAACACGCCGACGTGCTGAGTCTGGGTAAGCGTTTGATTGAAGATGAAGAGTACTGA", + "dna_sequence_length": 426, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_2414", + "location": [ + [ + "NC_000913", + 2552138, + "-", + 426 + ] + ], + "md5": "179552d779466a8663dfb5da6088101f", + "parent_gene": "", + "protein_md5": "5614f958475d8de6dafbed3580da5892", + "protein_translation": "MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGDVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008032" + ], + [ + "gene_synonym", + "ECK2430" + ], + [ + "gene_synonym", + "EcoGene:EG11823" + ], + [ + "gene_synonym", + "GI:16130360" + ], + [ + "gene_synonym", + "GeneID:946916" + ], + [ + "gene_synonym", + "JW2428" + ], + [ + "gene_synonym", + "NP_416930.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36548" + ], + [ + "gene_synonym", + "amiA" + ], + [ + "gene_synonym", + "b2435" + ], + [ + "gene_synonym", + "yfeE" + ] + ], + "dna_sequence": "ATGAGCACTTTTAAACCACTAAAAACACTCACTTCGCGCCGCCAGGTGCTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTACGATCGCGTTGAAATCGCCCATAAACATGGCGCAGATCTGTTTATGTCAATTCATGCCGATGGCTTTACCAACCCGAAAGCTGCCGGTGCTTCGGTATTTGCCCTCTCTAACCGTGGGGCAAGTAGCGCAATGGCGAAATACCTGTCTGAACGCGAAAACCGCGCCGATGAAGTTGCCGGTAAAAAGGCGACTGACAAGGATCACCTATTGCAACAAGTGCTGTTTGATCTGGTGCAAACAGATACCATTAAAAATAGTCTGACGCTCGGCTCGCATATTCTGAAGAAGATTAAGCCGGTGCATAAACTGCACAGCCGCAACACCGAACAAGCGGCATTTGTGGTGTTGAAATCACCGTCGGTTCCTTCGGTGCTGGTGGAAACCTCGTTTATCACCAACCCGGAAGAAGAACGGCTGTTAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAA", + "dna_sequence_length": 870, + "functions": [ + "N-acetylmuramoyl-l-alanine amidase I" + ], + "id": "CDS_2415", + "location": [ + [ + "NC_000913", + 2552352, + "+", + 870 + ] + ], + "md5": "c0add0cb7c493eca3d5f9f83db5b510c", + "parent_gene": "", + "protein_md5": "b353cedc91ac4357fcffac05436368c3", + "protein_translation": "MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDELLKTSNGHSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSKKR", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008034" + ], + [ + "gene_synonym", + "ECK2431" + ], + [ + "gene_synonym", + "EcoGene:EG12189" + ], + [ + "gene_synonym", + "GI:16130361" + ], + [ + "gene_synonym", + "GeneID:946908" + ], + [ + "gene_synonym", + "JW2429" + ], + [ + "gene_synonym", + "NP_416931.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36553" + ], + [ + "gene_synonym", + "b2436" + ], + [ + "gene_synonym", + "hemF" + ], + [ + "gene_synonym", + "popB" + ], + [ + "gene_synonym", + "sec" + ] + ], + "dna_sequence": "ATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCGCGGTATTGGCGGGCTGTTCTTTGATGACCTGAACACGCCAGATTTCGACCGCTGTTTTGCCTTTATGCAGGCGGTAGGCAAAGGCTACACCGACGCTTATTTACCAATTGTCGAGCGACGGAAAGCGATGGCCTACGGCGAGCGCGAGCGCAATTTCCAGTTATATCGTCGCGGTCGTTATGTCGAGTTCAATCTGGTCTGGGATCGCGGCACGCTGTTTGGCCTGCAAACTGGCGGGCGCACCGAGTCTATCCTGATGTCAATGCCGCCACTGGTACGCTGGGAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAA", + "dna_sequence_length": 900, + "functions": [ + "coproporphyrinogen III oxidase" + ], + "id": "CDS_2416", + "location": [ + [ + "NC_000913", + 2553225, + "+", + 900 + ] + ], + "md5": "5e189cbf6b177f367824ab056b9e80a7", + "parent_gene": "", + "protein_md5": "290773f2e578924a6ead21a0f9af21b8", + "protein_translation": "MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGADPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDRCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008036" + ], + [ + "gene_synonym", + "ECK2432" + ], + [ + "gene_synonym", + "EcoGene:EG12190" + ], + [ + "gene_synonym", + "GI:16130362" + ], + [ + "gene_synonym", + "GeneID:946911" + ], + [ + "gene_synonym", + "JW2430" + ], + [ + "gene_synonym", + "NP_416932.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36547" + ], + [ + "gene_synonym", + "b2437" + ], + [ + "gene_synonym", + "eutR" + ], + [ + "gene_synonym", + "yfeG" + ] + ], + "dna_sequence": "ATGAAAAAGACCCGTACAGCCAATTTGCACCATCTTTATCATGAACCCTTACCCGAAAACCTGAAGCTCACGCCGAAGGTCGAAGTGGATAATGTTCATCAACGACAGACAACGGATGTCTATGAACATGCTTTAACGATTACCGCCTGGCAGCAGATTTACGATCAGCTGCATCCGGGCAAGTTTCATGGTGAATTTACGGAAATTCTACTCGATGATATTCAGGTTTTTCGTGAATACACCGGTCTGGCGCTGCGTCAGTCGTGCCTGGTCTGGCCGAACTCGTTCTGGTTTGGCATTCCGGCGACGCGCGGTGAGCAGGGATTTATCGGTTCGCAATGTCTGGGAAGCGCGGAAATCGCCACCCGCCCTGGTGGCACTGAATTTGAACTGAGCACGCCGGATGATTACACGATCCTGGGCGTGGTGCTTTCTGAAGATGTCATCACCCGGCAGGCTAACTTTTTGCATAACCCGGATCGGGTATTACATATGTTGCGTAACCAGTCGGCGCTGGAAGTGAAAGAGCAGCATAAAGCCGCGCTGTGGGGCTTTGTCCAACAGGCGCTGGCGACGTTTTGCGAGAATCCGGAAAATCTCCATCAGCCTGCAGTGCGAAAAGTGCTGGGGGATAATTTGCTAATGGCGATGGGGGCCATGCTGGAAGAAGCGCAACCAATGGTGACGGCGGAAAGCATCAGTCATCAGAGTTACCGTCGATTGCTTTCCCGCGCCCGTGAATATGTGCTGGAAAACATGTCCGAACCGGTGACGGTGCTGGATTTGTGTAATCAACTGCATGTCAGCCGCCGCACGCTACAAAACGCGTTTCACGCTATTTTAGGCATTGGCCCGAACGCGTGGCTGAAACGCATTCGCCTGAACGCCGTACGCCGCGAACTGATAAGTCCGTGGTCGCAAAGTATGACGGTAAAAGACGCCGCCATGCAGTGGGGATTCTGGCATCTGGGGCAATTTGCCACGGATTACCAGCAGCTGTTTTCCGAGAAGCCGTCACTGACGCTGCATCAGCGGATGCGGGAGTGGGGGTGA", + "dna_sequence_length": 1053, + "functions": [ + "eut operon transcriptional activator, AraC family" + ], + "id": "CDS_2417", + "location": [ + [ + "NC_000913", + 2555182, + "-", + 1053 + ] + ], + "md5": "4d9bbeddac11df0dc839bc10c37d26f0", + "parent_gene": "", + "protein_md5": "3f1c9ee2c90589762a0d89496ed741d4", + "protein_translation": "MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008039" + ], + [ + "gene_synonym", + "ECK2433" + ], + [ + "gene_synonym", + "EcoGene:EG14170" + ], + [ + "gene_synonym", + "GI:90111436" + ], + [ + "gene_synonym", + "GeneID:946912" + ], + [ + "gene_synonym", + "JW2431" + ], + [ + "gene_synonym", + "NP_416933.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76540" + ], + [ + "gene_synonym", + "b2438" + ], + [ + "gene_synonym", + "eutK" + ], + [ + "gene_synonym", + "yffI" + ] + ], + "dna_sequence": "ATGATCAATGCACTGGGATTGCTGGAAGTGGACGGCATGGTCGCCGCGATAGATGCAGCGGATGCCATGCTCAAAGCAGCTAACGTTCGTCTGCTCAGTCACGAAGTGCTTGACCCTGGTCGCTTAACGCTGGTGGTGGAAGGCGATCTGGCGGCGTGTCGTGCGGCGCTGGACGCAGGTTGTGCTGCCGCGATGCGTACCGGGCGTGTCATCAGCCGCAAGGAGATCGGTCGGCCAGACGATGACACCCAGTGGCTGGTTACTGGCTTTAACCGCCAGCCGAAGCAACCCGTAAGGGAACCCGACGCGCCAGTTATCGTCGCGGAATCTGCTGACGAGTTGTTGGCGCTGTTAACATCAGTACGTCAGGGAATGACGGCAGGAGAAGTGGCTGCCCACTTTGGCTGGCCGCTGGAAAAAGCCAGAAATGCGCTCGAACAGCTCTTTTCTGCCGGGACGTTACGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAA", + "dna_sequence_length": 501, + "functions": [ + "putative ethanol utilization carboxysome structural protein" + ], + "id": "CDS_2418", + "location": [ + [ + "NC_000913", + 2555728, + "-", + 501 + ] + ], + "md5": "4f53e663fdc545c5c1a407549b0baa47", + "parent_gene": "", + "protein_md5": "548ebbc11ef0154a0be78c9ffc762231", + "protein_translation": "MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008041" + ], + [ + "gene_synonym", + "ECK2434" + ], + [ + "gene_synonym", + "EcoGene:EG14171" + ], + [ + "gene_synonym", + "GI:16130364" + ], + [ + "gene_synonym", + "GeneID:946914" + ], + [ + "gene_synonym", + "JW2432" + ], + [ + "gene_synonym", + "NP_416934.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76541" + ], + [ + "gene_synonym", + "b2439" + ], + [ + "gene_synonym", + "eutL" + ], + [ + "gene_synonym", + "yffJ" + ] + ], + "dna_sequence": "ATGCCAGCTTTAGATTTGATTCGACCGTCTGTCACCGCTATGCGGGTGATTGCCTCCGTTAACGCCGATTTTGCGCGTGAACTGAAATTGCCGCCGCATATTCGTAGCCTCGGTCTGATTTCTGCCGACTCCGATGACGTCACCTACATTGCCGCTGATGAAGCGACCAAGCAGGCGATGGTGGAAGTGGTGTATGGCCGCTCGCTATATGCGGGCGCTGCACACGGCCCGTCACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTGGCACATGTAGTTTCGCGTACCGGTTCTTATCTCTCATCAACCGCCGGGATCACGCTTGGCGATCCGATGGCGTATCTGGTGGCACCGCCGCTGGAAGCGACCTATGGCATTGATGCAGCCCTGAAGTCTGCCGACGTACAGCTGGCGACCTATGTCCCGCCACCGTCTGAAACCAACTACTCGGCAGCATTTTTAACCGGTAGCCAGGCAGCGTGTAAAGCAGCCTGTAACGCCTTTACCGATGCAGTGCTGGAAATCGCGCGTAATCCAATCCAGCGTGCGTAA", + "dna_sequence_length": 660, + "functions": [ + "putative ethanol utilization carboxysome structural protein" + ], + "id": "CDS_2419", + "location": [ + [ + "NC_000913", + 2556400, + "-", + 660 + ] + ], + "md5": "294b20752a5bc7f172f71c29e1d139fb", + "parent_gene": "", + "protein_md5": "2004aada7375fe5eefaf26bacaa39084", + "protein_translation": "MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008043" + ], + [ + "gene_synonym", + "ECK2435" + ], + [ + "gene_synonym", + "EcoGene:EG50007" + ], + [ + "gene_synonym", + "GI:16130365" + ], + [ + "gene_synonym", + "GeneID:946925" + ], + [ + "gene_synonym", + "JW2433" + ], + [ + "gene_synonym", + "NP_416935.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19636" + ], + [ + "gene_synonym", + "b2440" + ], + [ + "gene_synonym", + "eutC" + ] + ], + "dna_sequence": "ATGGATCAAAAACAGATTGAAGAAATTGTACGCAGCGTGATGGCGTCAATGGGACAAGCGGCCCCCGCGCCGTCAGAAGCAAAGTGCGCCACCACCAACTGTGCGGCACCGGTGACCTCGGAAAGCTGTGCGCTGGATTTAGGTTCCGCTGAAGCAAAAGCGTGGATTGGTGTTGAAAATCCGCATCGCGCAGACGTATTAACAGAACTGCGCCGCAGCACCGTGGCCCGCGTTTGTACCGGTCGTGCCGGTCCGCGTCCACGTACGCAGGCGCTGCTGCGTTTCCTGGCCGATCACTCTCGTTCGAAAGATACCGTACTGAAAGAAGTGCCGGAAGAGTGGGTGAAAGCGCAGGGCTTGCTGGAAGTACGCTCTGAAATTAGCGACAAAAATCTCTACCTGACTCGCCCGGATATGGGCCGCCGCCTGTGTGCAGAAGCTGTTGAAGCGCTGAAAGCGCAGTGTGTTGCCAATCCGGACGTACAGGTCGTTATTTCTGATGGCCTGTCAACTGATGCGATCACCGTGAACTACGAAGAGATCCTGCCACCGCTGATGGCGGGCCTGAAACAGGCCGGGCTGAAAGTCGGTACACCATTCTTTGTTCGTTATGGTCGCGTGAAGATTGAAGATCAGATCGGTGAGATCCTCGGCGCGAAAGTAGTGATCCTGCTGGTGGGCGAACGTCCGGGGTTGGGTCAGTCAGAAAGCCTCTCCTGCTACGCCGTTTACTCGCCGCGTATGGCGACCACCGTTGAGGCCGATCGCACCTGTATCTCTAACATTCACCAGGGCGGCACGCCGCCGGTTGAAGCCGCAGCCGTCATTGTGGATTTGGCGAAACGTATGCTGGAGCAGAAAGCATCCGGCATCAACATGACCCGATAA", + "dna_sequence_length": 888, + "functions": [ + "ethanolamine ammonia-lyase, small subunit (light chain)" + ], + "id": "CDS_2420", + "location": [ + [ + "NC_000913", + 2557297, + "-", + 888 + ] + ], + "md5": "4e4459a3f8740483f08e1ffb47e9e1da", + "parent_gene": "", + "protein_md5": "fb13c61731e75f4a875ed2bacd1b7153", + "protein_translation": "MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008046" + ], + [ + "gene_synonym", + "ECK2436" + ], + [ + "gene_synonym", + "EcoGene:EG50006" + ], + [ + "gene_synonym", + "GI:90111437" + ], + [ + "gene_synonym", + "GeneID:946924" + ], + [ + "gene_synonym", + "JW2434" + ], + [ + "gene_synonym", + "NP_416936.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEJ6" + ], + [ + "gene_synonym", + "b2441" + ], + [ + "gene_synonym", + "eutB" + ] + ], + "dna_sequence": "ATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGTAAAAGAGGTGCTGGCTAAAGCCAACGAACTGCGTTCGGGGGATGTGCTGGCGGGCGTCGCAGCGGCAAGCTCACAGGAGCGCGTGGCGGCAAAGCAGGTGTTGTCGGAAATGACCGTAGCGGACATCCGCAATAATCCGGTGATTGCCTATGAAGATGACTGCGTGACGCGGCTGATTCAGGACGATGTTAACGAAACGGCCTACAACCAGATTAAAAACTGGAGCATCAGCGAACTGCGTGAGTATGTGCTGAGCGATGAAACCAGCGTGGACGACATTGCCTTTACCCGCAAAGGGCTGACCTCGGAAGTGGTCGCGGCGGTAGCGAAGATTTGCTCCAACGCGGACCTGATCTACGGCGCGAAGAAAATGCCGGTAATCAAAAAGGCCAATACCACCATCGGTATTCCGGGCACCTTTAGCGCCCGTTTGCAGCCAAATGACACCCGTGACGACGTGCAAAGTATCGCCGCGCAAATCTACGAAGGGCTTTCCTTCGGGGTGGGCGATGCGGTGATCGGCGTTAACCCGGTGACTGACGACGTGGAAAACTTAAGCCGCGTGTTGGATACCATCTATGGCGTGATCGACAAATTCAACATCCCAACTCAGGGCTGTGTACTGGCGCACGTCACCACCCAGATCGAAGCGATCCGTCGTGGCGCACCGGGCGGGCTGATTTTCCAGAGTATCTGTGGCAGCGAAAAAGGGCTGAAAGAGTTTGGCGTGGAGCTGGCGATGCTCGACGAAGCGCGCGCAGTGGGCGCGGAGTTCAACCGTATCGCCGGGGAAAACTGCCTCTACTTCGAAACCGGACAAGGCTCTGCGCTATCCGCTGGCGCTAACTTCGGCGCAGACCAGGTAACGATGGAAGCACGTAACTACGGGCTGGCGCGTCATTACGATCCGTTTATCGTCAACACCGTGGTCGGCTTTATTGGGCCGGAGTATCTCTACAACGACCGCCAGATTATCCGTGCTGGCTTAGAAGATCACTTTATGGGCAAGCTGAGCGGCATCTCTATGGGCTGTGACTGCTGTTATACCAACCACGCTGACGCTGACCAGAACCTCAACGAAAACCTGATGATCCTGCTCGCCACCGCAGGCTGCAACTACATCATGGGGATGCCGCTGGGTGATGACATCATGCTCAACTACCAGACCACCGCATTCCACGATACCGCCACTGTGCGTCAGTTACTCAACCTGCGCCCGTCACCGGAGTTTGAACGCTGGCTGGAAAGCATGGGCATTATGGCAAACGGTCGCCTGACCAAACGGGCGGGCGATCCGTCACTGTTCTTCTGA", + "dna_sequence_length": 1362, + "functions": [ + "ethanolamine ammonia-lyase, large subunit, heavy chain" + ], + "id": "CDS_2421", + "location": [ + [ + "NC_000913", + 2558679, + "-", + 1362 + ] + ], + "md5": "861faadc2eb61001aa602f7a9a814182", + "parent_gene": "", + "protein_md5": "221493648e7a2ad71b262251e251b3ee", + "protein_translation": "MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERVAAKQVLSEMTVADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008052" + ], + [ + "gene_synonym", + "ECK2437" + ], + [ + "gene_synonym", + "EcoGene:EG14172" + ], + [ + "gene_synonym", + "GI:145698295" + ], + [ + "gene_synonym", + "GeneID:946923" + ], + [ + "gene_synonym", + "NP_416937.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76542" + ], + [ + "gene_synonym", + "b2442" + ], + [ + "gene_synonym", + "intZ" + ] + ], + "dna_sequence": "TTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAGAGTTTTTGCAGGCCATTGGAGTTTACCCGCTAATCACACTCAAAGAAGCACGCAGGCGCGCCACGGAGAGCAGATCCCTTATTGCCAATGGAATTAACCCAGTGGAACAAGCCCGCAAGGAAAAAGCCATTGATGCGCTCAACATGGCGGCAGGATTTAAGAAGGTGGCGGAAGACTGGTTTGCTACCAGGGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTTGTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGA", + "dna_sequence_length": 1209, + "functions": [ + "CPZ-55 prophage", + "putative phage integrase" + ], + "id": "CDS_2422", + "location": [ + [ + "NC_000913", + 2558858, + "+", + 1209 + ] + ], + "md5": "26bbb8cae0af5716227c18b2dd3cf277", + "parent_gene": "", + "protein_md5": "51659e322820521603cc484f5e653889", + "protein_translation": "MSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQAAYLKQRRAMMQDYADAIDSILAGNGNPLEPE", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008055" + ], + [ + "gene_synonym", + "ECK2438" + ], + [ + "gene_synonym", + "EcoGene:EG14173" + ], + [ + "gene_synonym", + "GI:16130368" + ], + [ + "gene_synonym", + "GeneID:946922" + ], + [ + "gene_synonym", + "NP_416938.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76543" + ], + [ + "gene_synonym", + "b2443" + ], + [ + "gene_synonym", + "yffL" + ] + ], + "dna_sequence": "ATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATAAAGCACCCAAAAACGAAGAGACTAAACACGAAGAACACACGCCAGATAATCACGAGGAAACAGATCATCACGAGGCAAAACAGCAGGAGCAAGCCTGGCGTGGCAACCTGCGCTACCTGGACACATTAAACCGACTTGATGAAGTATTGCCCCGCAAACTGTACGAAAGATGGGAGAAAGAACATACAGTCAACGACGAGGCTGTGCTACGTGCTCTTTGTTACTTCGCTGGTACTGGCAAAAACTCACAGTTGGGATGGTGCAGGGTTGGTAGGGGAACAATCGACAAACGAGCCAGGCTATCAAAAAACACGGTTAAAAAATGCCTCGATCGTCTGGTCAACCACTTCAAACTTGTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAA", + "dna_sequence_length": 642, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2423", + "location": [ + [ + "NC_000913", + 2560257, + "+", + 642 + ] + ], + "md5": "6d3d4548ba04ae3277e1fd25ac16cabb", + "parent_gene": "", + "protein_md5": "5fd15fa04c75f89abece871ea5c86e73", + "protein_translation": "MFATKDPEFENRINTNKSPRNAATCRGRYEKQAKGEFLMSDMLAVEQETNNDVRQFLNKINELRNKAPKNEETKHEEHTPDNHEETDHHEAKQQEQAWRGNLRYLDTLNRLDEVLPRKLYERWEKEHTVNDEAVLRALCYFAGTGKNSQLGWCRVGRGTIDKRARLSKNTVKKCLDRLVNHFKLVERTEGYIPGSAERECNEYQLLFKPYNMK", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008061" + ], + [ + "gene_synonym", + "ECK2439" + ], + [ + "gene_synonym", + "EcoGene:EG14174" + ], + [ + "gene_synonym", + "GI:16130369" + ], + [ + "gene_synonym", + "GeneID:946921" + ], + [ + "gene_synonym", + "NP_416939.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76544" + ], + [ + "gene_synonym", + "b2444" + ], + [ + "gene_synonym", + "yffM" + ] + ], + "dna_sequence": "GTGATGGTTATCCGCCACGAATGTCCGTCATATTGCATTGCGCAGAAACGCGTGGCACTGAGGGAGTTTTCCGAATTAGTTTTGGGGACCCTTTCCCTGCTTCTGGAGCAAAAGACGAACGGCAAATGCAGTGCTTCCTTGTACGACTGCAGCGAAGAAGAAAAGCTGTTTGTTAAGCGCCTGAAGTTAATCAAAGCGGATATCCACGCCCAGCTGAAGGCCTGTGATTGCGATATTTCTGAATGA", + "dna_sequence_length": 246, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2424", + "location": [ + [ + "NC_000913", + 2561368, + "+", + 246 + ] + ], + "md5": "9f6c362b8a499459e8d7de06272eaf5b", + "parent_gene": "", + "protein_md5": "a3d80a77b1977971eb17e5595ce660f5", + "protein_translation": "MMVIRHECPSYCIAQKRVALREFSELVLGTLSLLLEQKTNGKCSASLYDCSEEEKLFVKRLKLIKADIHAQLKACDCDISE", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008063" + ], + [ + "gene_synonym", + "ECK2440" + ], + [ + "gene_synonym", + "EcoGene:EG14175" + ], + [ + "gene_synonym", + "GI:145698296" + ], + [ + "gene_synonym", + "GeneID:946930" + ], + [ + "gene_synonym", + "NP_416940.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76545" + ], + [ + "gene_synonym", + "b2445" + ], + [ + "gene_synonym", + "yffN" + ] + ], + "dna_sequence": "ATGAAACACGTTTTTAAATATCTTGATTTTGCAGAAGACCGCGAACACGCAGAATCAGTGGCGACCAAAGAGTTAAAACTGGACCACGTAGAAAAATTCGCTATCCGCGATCTAGCCAATGATATCAAAGAGCGTGGGTGTGTTGAGCTTGTCCAGCCTGGTGGATTCGATGAGCTGGTTCAGATCTATGAGGCCGGAGGCGATGGAATAGAGCCACTCAATTGTGGAATCGAATCAAGGAAGGTGGCAATTGCTGCCCTGCTTCGCGTCATGCGTGAACCAGACTTTCAATGCCTGGAAATGGTTCACGAAATCATAAGAATTGCTAGAGATTTGGAAGCGCCAGTTGACGCTCCGTTAGATTGCTAA", + "dna_sequence_length": 369, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2425", + "location": [ + [ + "NC_000913", + 2561625, + "+", + 369 + ] + ], + "md5": "54b9943b0153b501c859b1c3f7e16bdb", + "parent_gene": "", + "protein_md5": "38b8c32435feba5953ea4addd05867d3", + "protein_translation": "MKHVFKYLDFAEDREHAESVATKELKLDHVEKFAIRDLANDIKERGCVELVQPGGFDELVQIYEAGGDGIEPLNCGIESRKVAIAALLRVMREPDFQCLEMVHEIIRIARDLEAPVDAPLDC", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008066" + ], + [ + "gene_synonym", + "ECK2441" + ], + [ + "gene_synonym", + "EcoGene:EG14176" + ], + [ + "gene_synonym", + "GI:16130371" + ], + [ + "gene_synonym", + "GeneID:946929" + ], + [ + "gene_synonym", + "NP_416941.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76546" + ], + [ + "gene_synonym", + "b2446" + ], + [ + "gene_synonym", + "yffO" + ] + ], + "dna_sequence": "ATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCAGGGAAGGGATAGCCTGGATGTCGTGGCTATGGTGCGCTGAAGCTGGCCGACGTGCCGTCGAGATAATCGACGAGGTTGATATAAACGCAGAGGATGGGCCGAAGCAGTTGCGCAAAGCAGAAGCAAAGGCAAAGGCACTACTGGCAGCAGCCAAGCTGAATAGTTTGAAACATTCACCATTTGGAGATGACAAACAATGA", + "dna_sequence_length": 417, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2426", + "location": [ + [ + "NC_000913", + 2562111, + "+", + 417 + ] + ], + "md5": "7b8eb5b8ab20b44dd43feb92db0f8ad5", + "parent_gene": "", + "protein_md5": "f3de6356c83eadb5fdf1a6aed4ae9e79", + "protein_translation": "MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008069" + ], + [ + "gene_synonym", + "ECK2442" + ], + [ + "gene_synonym", + "EcoGene:EG14177" + ], + [ + "gene_synonym", + "GI:16130372" + ], + [ + "gene_synonym", + "GeneID:946928" + ], + [ + "gene_synonym", + "NP_416942.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76547" + ], + [ + "gene_synonym", + "b2447" + ], + [ + "gene_synonym", + "yffP" + ] + ], + "dna_sequence": "ATGAGCCTGATCCGCACTGAAACCAGAGACACAAAACGCGCAGCTGACCCACTGCACGACCTGCGTAGCAAGCCGTTTTCTGAGTGGGGCGAAGATGAAATCAGGCGTTTTAATCTGATAGACGCGCTTCTTGAGTTTGTCTACACAGACACATCCAGCCCGTTCGGTATCGGCATGACCTTCGATTACACGGAGTGCTGGGAAATTGGTGTTCGTGACGACTGCCTGGTAATGACACGCGTTAAGCCGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGA", + "dna_sequence_length": 594, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2427", + "location": [ + [ + "NC_000913", + 2562524, + "+", + 594 + ] + ], + "md5": "1a64e0de865df0ce10c665e277b6e450", + "parent_gene": "", + "protein_md5": "df103efa85fcaeada99de04539dd2833", + "protein_translation": "MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMTFDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVSLSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHANDPKLVGDDYVPQAPEQIN", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008072" + ], + [ + "gene_synonym", + "ECK2443" + ], + [ + "gene_synonym", + "EcoGene:EG14178" + ], + [ + "gene_synonym", + "GI:145698297" + ], + [ + "gene_synonym", + "GeneID:946927" + ], + [ + "gene_synonym", + "NP_416943.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76548" + ], + [ + "gene_synonym", + "b2448" + ], + [ + "gene_synonym", + "yffQ" + ] + ], + "dna_sequence": "ATGAAACTTTTAATCGCAATCATCCTGATGGTGCTGACTGGTGTTTGCTTTGCAGATGTTGGTGATTACAGGCTGAACGGGGAGGATAACGCAAGAATTGAATCAGTCGTTACTGATAACTGTGAAAAAACAGCCGTATTGGTAGGCGGTGACAGGCTTGCGAGGGTTGAGATCGAATATATAGCGACATTGTGCAAGCCGGTGGCTTTGGTGATTATTTACGACAGATTTGACGATATAGCGGCAATCCCTCTTAAGGTGACGTTGAAAAAGGTATTGAAAGAGAATAGCGATGAAAAGATTAACCTATTGAACAAGATGGGGGATCTGGCTGGTCGTATCGTTGCAGAGCAGTATTTAGGCATGAGTTTTGAGTAA", + "dna_sequence_length": 378, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2428", + "location": [ + [ + "NC_000913", + 2563592, + "+", + 378 + ] + ], + "md5": "816a642b7af44659806a807e7acedb23", + "parent_gene": "", + "protein_md5": "eb8788209b368a6895ff498918a5ed27", + "protein_translation": "MKLLIAIILMVLTGVCFADVGDYRLNGEDNARIESVVTDNCEKTAVLVGGDRLARVEIEYIATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAEQYLGMSFE", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008074" + ], + [ + "gene_synonym", + "ECK2444" + ], + [ + "gene_synonym", + "EcoGene:EG14179" + ], + [ + "gene_synonym", + "GI:16130374" + ], + [ + "gene_synonym", + "GeneID:946931" + ], + [ + "gene_synonym", + "NP_416944.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76549" + ], + [ + "gene_synonym", + "b2449" + ], + [ + "gene_synonym", + "yffR" + ] + ], + "dna_sequence": "ATGAAAGTGTTAGGTAATATTTTATGGTGGGCTTTTGTTGGTTTCATGGCTTACGCCACTTTGATTAAGCCGGACAACACTGATCCAGCTGTTGTGAACTATGAAGAGCCTTTGCCTATGGAGCTTGCCAACTATGGCGAACCAGGTGAAGGGGCGAAAATCATGAATGCCGCAAAAATAATGGGTCGCGACTACGCATGGAAACATGTAAAAGAAGACAGGTTGCCATGTCTGTTTGCCGCCGGGGTTGTTGCTGATAACATCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACGGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGA", + "dna_sequence_length": 393, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2429", + "location": [ + [ + "NC_000913", + 2563980, + "+", + 393 + ] + ], + "md5": "fab57485c1474eb0c5a34cf73d1686f0", + "parent_gene": "", + "protein_md5": "65348cb43cf62e6018c5616e39f98f99", + "protein_translation": "MKVLGNILWWAFVGFMAYATLIKPDNTDPAVVNYEEPLPMELANYGEPGEGAKIMNAAKIMGRDYAWKHVKEDRLPCLFAAGVVADNILVKYHFSNETEFKLKAAAVRECANVAENNGFVLVGRVFEKRN", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008077" + ], + [ + "gene_synonym", + "ECK2445" + ], + [ + "gene_synonym", + "EcoGene:EG14180" + ], + [ + "gene_synonym", + "GI:145698298" + ], + [ + "gene_synonym", + "GeneID:946932" + ], + [ + "gene_synonym", + "NP_416945.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76550" + ], + [ + "gene_synonym", + "b2450" + ], + [ + "gene_synonym", + "yffS" + ] + ], + "dna_sequence": "ATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGCAAACGAGTTAACTCGCCGGGGAGTTAAAAACAACAAGGGAGAGGTTATTACTAAGGGCGGCGTTAGCCATTGGCTGGAAGGTAGACGGGAGCCAAATTTCGACACTCTGGCTGAACTGTGCGACATGTTCGGCGTTTATGCCCTGATGCCGATGCGTGGCGGTAAATGGATTCGAGTTCACCCGGAAGACCGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGAAAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGGGCGGCGAATACCTGGGCAACAACGCAGGGTTACAGCAGAAGATCACTGTGTTGGATAACGACGGCAACCGGAAGCCAATCAGTAACGGCGCGTTTTATCGACTGATTGAGCAGGCCAAAGGGAGAGGATTGATTAGCGTTGAACAGGAAATCAAACACAAGAAAGACGAAAACGGCAACCAGATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAA", + "dna_sequence_length": 810, + "functions": [ + "CPZ-55 prophage", + "uncharacterized protein" + ], + "id": "CDS_2430", + "location": [ + [ + "NC_000913", + 2564523, + "+", + 810 + ] + ], + "md5": "261ce8e4356a458a6f4b77ee51b25697", + "parent_gene": "", + "protein_md5": "4394348181a8fc30e0db5ea0cd4256b1", + "protein_translation": "MSYEIKICDILKGAAMEGQYKGAQRGAKCEEIANELTRRGVKNNKGEVITKGGVSHWLEGRREPNFDTLAELCDMFGVYALMPMRGGKWIRVHPEDRGEMELREAVAERDAIIDDLKARIAELEAALANKQVPAEAEEMGGEKVEEVAAEQAPNDEKEMGAKEWVNPNPKKYSVGMLCQVLAAMGGEYLGNNAGLQQKITVLDNDGNRKPISNGAFYRLIEQAKGRGLISVEQEIKHKKDENGNQIGKGKKGDKLITLLPNWIDKLGDE", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008079" + ], + [ + "gene_synonym", + "ECK2446" + ], + [ + "gene_synonym", + "EcoGene:EG14181" + ], + [ + "gene_synonym", + "GI:16130376" + ], + [ + "gene_synonym", + "GeneID:946937" + ], + [ + "gene_synonym", + "JW2435" + ], + [ + "gene_synonym", + "NP_416946.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76551" + ], + [ + "gene_synonym", + "b2451" + ], + [ + "gene_synonym", + "eutA" + ], + [ + "gene_synonym", + "yffT" + ] + ], + "dna_sequence": "GTGAACACTCGCCAGCTATTGAGCGTCGGTATCGATATCGGCACCACCACCACCCAGGTGATTTTCTCCCGGCTGGAGCTGGTTAACCGTGCGGCGGTGTCGCAGGTGCCGCGCTACGAATTCATTAAACGCGAAATTAGCTGGCAAAGTCCGGTGTTCTTTACCCCTGTCGATAAACAGGGCGGTTTAAAAGAAGCGGAACTGAAAACCTTAATACTCGAGCAATATCATGCTGCGGGTATTGAGCCGGAAAGCGTTGATTCTGGTGCCATCATCATCACCGGTGAAAGCGCGAAAACCCGCAATGCTCGCCCGGCGGTGATGGCGCTCTCTCAGTCGCTGGGCGATTTTGTCGTTGCCAGCGCCGGGCCGCACCTCGAATCCGTGATCGCCGGTCACGGAGCCGGGGCACAAACCCTTTCTGAACAACGGCTGTGTCGGGTACTGAATATCGACATCGGCGGTGGCACCGCGAACTACGCCCTGTTCGATGCCGGAAAAATCAGCGGCACTGCCTGCCTCAACGTCGGTGGTCGCCTGCTGGAAACCGACAGCCACGGGCGCGTGGTTTACGCTCATAAACCGGGGCAGATGATTGTGGATGAGTGCTTCGGTGCAGGCACCGACGCCCGTTCGCTGACCGGCGCGCAGCTGGTGCAGGTGACCCGGCGGATGGCAGAACTGATTGTCGAAGTGATTGACGGAACGCTCTCACCGCTCGCGCAGGCATTGATGCAAACCGGTTTGCTGCCCGCAGGTGTTACGCCCGAAATCATTACGCTTTCTGGCGGCGTGGGCGAATGTTATCGCCACCAGCCCGCCGACCCGTTCTGTTTTGCCGATATTGGCCCGCTGCTGGCAACTGCGCTGCATGACCATCCGCGCCTGCGTGAGATGAACGTACAGTTTCCGGCGCAAACCGTGCGCGCCACGGTGATTGGCGCGGGCGCGCATACCCTTTCGCTCTCTGGCAGCACAATCTGGCTTGAGGGCGTACAACTGCCGCTGCGCAATTTGCCGGTGGCGATCCCGATTGATGAAACGGATCTGGTGGGGGCCTGGCAACAGGCGCTGATTCAGCTGGATCTTGATCCCAAAACTGACGCGTACGTGCTGGCGCTTCCCGCCTCGCTGCCTGTGCGTTACGCCGCGGTACTGACGGTCATCAACGCGTTGGTCGATTTCGTCGCGCGTTTTCCGAATCCGCATCCCCTGCTGGTGGTGGCCGGGCAGGACTTTGGTAAAGCTCTGGGCATGTTGTTGCGCCCACAGCTACAACAACTCCCGTTGGCAGTCATTGACGAAGTGATTGTCCGCGCGGGGGACTATATCGACATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA", + "dna_sequence_length": 1404, + "functions": [ + "reactivating factor for ethanolamine ammonia lyase" + ], + "id": "CDS_2431", + "location": [ + [ + "NC_000913", + 2566884, + "-", + 1404 + ] + ], + "md5": "9eff8edcf51a2c3b4e2a5cc329938fdf", + "parent_gene": "", + "protein_md5": "8ff7c266745c08a97e79a854eded1ca7", + "protein_translation": "MNTRQLLSVGIDIGTTTTQVIFSRLELVNRAAVSQVPRYEFIKREISWQSPVFFTPVDKQGGLKEAELKTLILEQYHAAGIEPESVDSGAIIITGESAKTRNARPAVMALSQSLGDFVVASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTACLNVGGRLLETDSHGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAELIVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADPFCFADIGPLLATALHDHPRLREMNVQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIPIDETDLVGAWQQALIQLDLDPKTDAYVLALPASLPVRYAAVLTVINALVDFVARFPNPHPLLVVAGQDFGKALGMLLRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008081" + ], + [ + "gene_synonym", + "ECK2447" + ], + [ + "gene_synonym", + "EcoGene:EG14182" + ], + [ + "gene_synonym", + "GI:16130377" + ], + [ + "gene_synonym", + "GeneID:944979" + ], + [ + "gene_synonym", + "JW2436" + ], + [ + "gene_synonym", + "NP_416947.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76552" + ], + [ + "gene_synonym", + "b2452" + ], + [ + "gene_synonym", + "eutH" + ], + [ + "gene_synonym", + "yffU" + ] + ], + "dna_sequence": "ATGGGAATTAACGAAATCATCATGTACATCATGATGTTCTTTATGCTGATAGCTGCCGTAGACAGGATCCTGTCGCAGTTCGGCGGTTCTGCTCGTTTCCTCGGTAAGTTCGGTAAAAGTATCGAAGGATCAGGCGGTCAGTTCGAAGAAGGCTTTATGGCAATGGGCGCACTGGGCCTGGCGATGGTCGGTATGACCGCGCTGGCACCGGTACTGGCTCACGTTCTCGGGCCGGTAATTATTCCGGTTTACGAAATGCTCGGCGCTAACCCATCGATGTTCGCCGGAACACTGCTGGCGTGCGATATGGGCGGCTTCTTCCTCGCCAAAGAGCTGGCGGGCGGCGACGTAGCCGCGTGGCTATACTCTGGGTTAATTCTCGGGTCGATGATGGGGCCAACGATTGTGTTTTCCATTCCGGTGGCGCTCGGCATTATCGAACCTTCTGACCGTCGTTATCTGGCGCTCGGCGTGCTGGCGGGCATTGTGACCATTCCGATTGGTTGTATCGCTGGTGGTCTGGTTGCTATGTACTCCGGTGTGCAGATCAACGGCCAGCCGGTGGAATTCACTTTCGCCCTGATCCTGATGAACATGATCCCGGTGATCATTGTTGCGATTCTGGTGGCGCTGGGGCTGAAATTCATCCCGGAAAAAATGATCAACGGCTTCCAGATCTTCGCCAAATTCCTCGTTGCATTGATCACCCTCGGTCTTGCCGCTGCGGTAGTGAAATTCCTGCTTGGCTGGGAACTGATCCCCGGTCTGGATCCTATCTTTATGGCCCCTGGCGATAAACCCGGTGAGGTGATGCGCGCCATTGAAGTTATCGGTTCTATCTCCTGCGTTCTGTTAGGGGCGTATCCGATGGTGCTGCTGCTGACTCGCTGGTTTGAAAAACCGCTGATGAGCGTCGGTAAAGTACTGAATATGAACAACATCGCGGCAGCCGGCATGGTGGCAACGCTTGCCAACAACATCCCGATGTTCGGCATGATGAAGCAGATGGATACCCGCGGCAAAGTCATCAACTGCGCCTTCGCCGTTTCCGCTGCTTTCGCCCTGGGCGACCACTTAGGCTTCGCCGCTGCCAACATGAACGCCATGATCTTCCCGATGATTGTCGGCAAGTTGATCGGCGGCGTAACGGCGATTGGCGTGGCGATGATGCTGGTGCCAAAAGAAGACGCGACCGCGACTAAAACCGAAGCGGAGGCACAATCGTGA", + "dna_sequence_length": 1227, + "functions": [ + "ethanolamine transporter" + ], + "id": "CDS_2432", + "location": [ + [ + "NC_000913", + 2568107, + "-", + 1227 + ] + ], + "md5": "355fd41a7ab0b766be3280498e8db60f", + "parent_gene": "", + "protein_md5": "b80a27cd14322716d8e56e161f0dbf27", + "protein_translation": "MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGSGGQFEEGFMAMGALGLAMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACDMGGFFLAKELAGGDVAAWLYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLAGIVTIPIGCIAGGLVAMYSGVQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPEKMINGFQIFAKFLVALITLGLAAAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEVIGSISCVLLGAYPMVLLLTRWFEKPLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMKQMDTRGKVINCAFAVSAAFALGDHLGFAAANMNAMIFPMIVGKLIGGVTAIGVAMMLVPKEDATATKTEAEAQS", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008087" + ], + [ + "gene_synonym", + "ECK2448" + ], + [ + "gene_synonym", + "EcoGene:EG14183" + ], + [ + "gene_synonym", + "GI:90111438" + ], + [ + "gene_synonym", + "GeneID:946233" + ], + [ + "gene_synonym", + "JW2437" + ], + [ + "gene_synonym", + "NP_416948.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76553" + ], + [ + "gene_synonym", + "b2453" + ], + [ + "gene_synonym", + "eutG" + ], + [ + "gene_synonym", + "yffV" + ] + ], + "dna_sequence": "ATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAATCTGCAACGGGTAAAAACATTTAGCGTTCCACCGGTGACGCTTTGCGGTCCGGGCTCGGTGAGCAGTTGCGGACAGCAAGCGCAAACGCGTGGGCTGAAACATCTGTTCGTGATGGCAGACAGCTTTTTGCATCAGGCAGGGATGACCGCCGGGCTGACGCGTAGCCTGACCGTTAAAGGTATCGCCATGACGCTCTGGCCATGTCCGGTGGGCGAACCGTGCATTACCGACGTGTGTGCAGCCGTGGCGCAGTTGCGTGAGTCAGGCTGTGATGGGGTGATCGCGTTTGGCGGCGGCTCGGTGCTGGATGCGGCGAAAGCCGTGACGTTGCTGGTGACGAACCCGGATAGCACGCTGGCAGAGATGTCAGAAACCAGCGTTCTGCAACCGCGCTTGCCGCTGATTGCCATTCCAACTACCGCCGGAACCGGCTCTGAAACCACCAATGTAACGGTGATTATCGACGCGGTGAGCGGGCGCAAGCAGGTGTTAGCCCATGCCTCGCTGATGCCGGATGTGGCGATCCTCGACGCCGCATTGACCGAAGGTGTGCCGTCGCATGTCACGGCGATGACCGGCATTGATGCGTTAACCCATGCCATTGAAGCATACAGCGCCCTGAACGCTACACCGTTTACCGACAGTCTGGCGATTGGTGCCATTGCGATGATTGGCAAATCGCTGCCGAAAGCGGTGGGCTACGGTCACGACCTTGCCGCGCGCGAGAGCATGTTGCTGGCTTCATGTATGGCGGGAATGGCGTTTTCCAGTGCGGGTCTTGGGTTGTGCCACGCGATGGCGCATCAGCCGGGCGCGGCGCTGCATATTCCGCACGGTCTCGCGAACGCCATGTTGCTGCCAACGGTGATGGAATTTAACCGGATGGTTTGTCGTGAACGCTTTAGTCAGATTGGTCGGGCACTGCGAACTAAAAAATCCGACGATCGTGACGCTATTAACGCGGTAAGTGAGCTGATTGCGGAAGTTGGGATTGGTAAACGACTGGGCGATGTTGGTGCGACATCTGCGCATTACGGCGCATGGGCGCAGGCCGCGCTGGAAGATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAA", + "dna_sequence_length": 1188, + "functions": [ + "ethanol dehydrogenase involved in ethanolamine utilization", + "aldehyde reductase" + ], + "id": "CDS_2433", + "location": [ + [ + "NC_000913", + 2569511, + "-", + 1188 + ] + ], + "md5": "a22e69f2884deef847bb01846d65c478", + "parent_gene": "", + "protein_md5": "ae4d6dca869b6a8aba74a2fe71d10b1e", + "protein_translation": "MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRSLTVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVTLLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVIIDAVSGRKQVLAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAIEAYSALNATPFTDSLAIGAIAMIGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAGLGLCHAMAHQPGAALHIPHGLANAMLLPTVMEFNRMVCRERFSQIGRALRTKKSDDRDAINAVSELIAEVGIGKRLGDVGATSAHYGAWAQAALEDICLRSNPRTASLEQIVGLYAAAQ", + "protein_translation_length": 395, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008089" + ], + [ + "gene_synonym", + "ECK2449" + ], + [ + "gene_synonym", + "EcoGene:EG14184" + ], + [ + "gene_synonym", + "GI:16130379" + ], + [ + "gene_synonym", + "GeneID:947588" + ], + [ + "gene_synonym", + "JW2438" + ], + [ + "gene_synonym", + "NP_416949.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77277" + ], + [ + "gene_synonym", + "b2454" + ], + [ + "gene_synonym", + "eutJ" + ], + [ + "gene_synonym", + "yffW" + ] + ], + "dna_sequence": "ATGGCGCACGACGAACAATGGCTCACCCCACGTCTGCAAACGGCGGCAACGCTGTGTAACCAGACGCCCGCCGCGACGGAATCTCCGCTGTGGCTGGGGGTGGATCTGGGCACCTGCGATGTGGTGTCGATGGTTGTCGACCGCGACGGTCAGCCAGTGGCGGTATGCCTCGACTGGGCCGATGTGGTTCGCGACGGCATCGTCTGGGATTTCTTCGGCGCTGTCACCATTGTTCGTCGCCATCTCGACACGCTCGAGCAGCAATTCGGTCGTCGTTTTAGCCATGCGGCGACTTCATTTCCTCCAGGTACGGACCCGCGTATTTCCATCAACGTGCTGGAATCTGCCGGACTGGAAGTGAGCCATGTGCTGGATGAGCCAACCGCAGTTGCGGATCTGCTGCAACTGGACAACGCCGGTGTAGTGGATATCGGCGGCGGCACTACCGGCATTGCCATCGTGAAAAAGGGCAAGGTGACGTACTCGGCGGATGAAGCCACCGGCGGACATCACATCTCTCTGACTCTCGCCGGAAATCGCCGTATTTCGCTGGAAGAGGCGGAGCAGTACAAGCGCGGTCACGGTGAAGAGATTTGGCCTGCGGTGAAACCGGTGTACGAAAAAATGGCGGACATTGTCGCCCGGCATATTGAAGGGCAGGGCATTACTGATTTATGGCTGGCGGGCGGCTCTTGTATGCAACCGGGCGTGGCGGAACTGTTTCGCAAACAATTCCCGGCGTTACAGGTGCATTTACCGCAGCACAGTTTGTTTATGACCCCGCTGGCGATCGCCAGTAGTGGGCGAGAGAAAGCGGAGGGGCTATATGCAAAATGA", + "dna_sequence_length": 837, + "functions": [ + "ethanolamine utilization protein, HSP70/actin superfamily protein" + ], + "id": "CDS_2434", + "location": [ + [ + "NC_000913", + 2570337, + "-", + 837 + ] + ], + "md5": "40c82caf18b5db6594d60ce1076305ae", + "parent_gene": "", + "protein_md5": "7835fcb0de1f99090abb5a94278e0fd6", + "protein_translation": "MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPAVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008091" + ], + [ + "gene_synonym", + "ECK2450" + ], + [ + "gene_synonym", + "EcoGene:EG14185" + ], + [ + "gene_synonym", + "GI:16130380" + ], + [ + "gene_synonym", + "GeneID:946943" + ], + [ + "gene_synonym", + "JW2439" + ], + [ + "gene_synonym", + "NP_416950.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77445" + ], + [ + "gene_synonym", + "b2455" + ], + [ + "gene_synonym", + "eutE" + ], + [ + "gene_synonym", + "yffX" + ] + ], + "dna_sequence": "ATGAATCAACAGGATATTGAACAGGTGGTGAAAGCGGTACTGCTGAAAATGCAAAGCAGTGACACGCCGTCCGCCGCCGTTCATGAGATGGGCGTTTTCGCGTCCCTGGATGACGCCGTTGCGGCAGCCAAAGTCGCCCAGCAAGGGTTAAAAAGCGTGGCAATGCGCCAGTTAGCCATTGCTGCCATTCGTGAAGCAGGCGAAAAACACGCCAGAGATTTAGCGGAACTTGCCGTCAGTGAAACCGGCATGGGGCGCGTTGAAGATAAATTTGCAAAAAACGTCGCTCAGGCGCGCGGCACACCAGGCGTTGAGTGCCTCTCTCCGCAAGTGCTGACTGGCGACAACGGCCTGACCCTAATTGAAAACGCACCCTGGGGCGTGGTGGCTTCGGTGACGCCTTCCACTAACCCGGCGGCAACCGTAATTAACAACGCCATCAGCCTGATTGCCGCGGGCAACAGCGTCATTTTTGCCCCGCATCCGGCGGCGAAAAAAGTCTCCCAGCGGGCGATTACGCTGCTCAACCAGGCGATTGTTGCCGCAGGTGGGCCGGAAAACTTACTGGTTACTGTGGCAAATCCGGATATCGAAACCGCGCAACGCTTGTTCAAGTTTCCGGGTATCGGCCTGCTGGTGGTAACCGGCGGCGAAGCGGTAGTAGAAGCGGCGCGTAAACACACCAATAAACGTCTGATTGCCGCAGGCGCTGGCAACCCGCCGGTAGTGGTGGATGAAACCGCCGACCTCGCCCGTGCCGCTCAGTCCATCGTCAAAGGCGCTTCTTTCGATAACAACATCATTTGTGCCGACGAAAAGGTACTGATTGTTGTTGATAGCGTAGCCGATGAACTGATGCGTCTGATGGAAGGCCAGCACGCGGTGAAACTGACCGCAGAACAGGCGCAGCAGCTGCAACCGGTGTTGCTGAAAAATATCGACGAGCGCGGAAAAGGCACCGTCAGCCGTGACTGGGTTGGTCGCGACGCAGGCAAAATCGCGGCGGCAATCGGCCTTAAAGTTCCGCAAGAAACGCGCCTGCTGTTTGTGGAAACCACCGCAGAACATCCGTTTGCCGTGACTGAACTGATGATGCCGGTGTTGCCCGTCGTGCGCGTCGCCAACGTGGCGGATGCCATTGCGCTAGCGGTGAAACTGGAAGGCGGTTGCCACCACACGGCGGCAATGCACTCGCGCAACATCGAAAACATGAACCAGATGGCGAATGCTATTGATACCAGCATTTTCGTTAAGAACGGACCGTGCATTGCCGGGCTGGGGCTGGGCGGGGAAGGCTGGACCACCATGACCATCACCACGCCAACCGGTGAAGGGGTAACCAGCGCGCGTACGTTTGTCCGTCTGCGTCGCTGTGTATTAGTCGATGCGTTTCGCATTGTTTAA", + "dna_sequence_length": 1404, + "functions": [ + "aldehyde oxidoreductase, ethanolamine utilization protein" + ], + "id": "CDS_2435", + "location": [ + [ + "NC_000913", + 2571751, + "-", + 1404 + ] + ], + "md5": "84f787037f10e3ad0908819a80b76787", + "parent_gene": "", + "protein_md5": "96c137a4ef700cb6ff449a08a17b2e19", + "protein_translation": "MNQQDIEQVVKAVLLKMQSSDTPSAAVHEMGVFASLDDAVAAAKVAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTPGVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAPHPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAGKIAAAIGLKVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHHTAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008093" + ], + [ + "gene_synonym", + "ECK2451" + ], + [ + "gene_synonym", + "EcoGene:EG14186" + ], + [ + "gene_synonym", + "GI:16130381" + ], + [ + "gene_synonym", + "GeneID:946945" + ], + [ + "gene_synonym", + "JW2440" + ], + [ + "gene_synonym", + "NP_416951.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEJ8" + ], + [ + "gene_synonym", + "b2456" + ], + [ + "gene_synonym", + "cchB" + ], + [ + "gene_synonym", + "eutN" + ], + [ + "gene_synonym", + "yffY" + ] + ], + "dna_sequence": "ATGAAACTGGCAGTCGTCACTGGACAAATTGTTTGTACCGTACGCCATCACGGACTGGCGCATGACAAATTGCTGATGGTGGAAATGATTGATCCACAAGGTAATCCTGACGGGCAATGCGCCGTCGCCATCGACAATATTGGCGCGGGAACCGGGGAGTGGGTGTTACTGGTGAGTGGCAGTTCCGCCCGCCAGGCGCATAAAAGCGAAACGTCACCGGTCGATCTGTGCGTGATTGGCATTGTCGATGAGGTGGTGTCTGGCGGTCAGGTAATTTTCCACAAATAA", + "dna_sequence_length": 288, + "functions": [ + "Ethanolamine catabolic microcompartment shell protein" + ], + "id": "CDS_2436", + "location": [ + [ + "NC_000913", + 2572050, + "-", + 288 + ] + ], + "md5": "f9f12dca0cf956d431252d5d5a7662e7", + "parent_gene": "", + "protein_md5": "0258db62944cfdf2ec2a4525305a48dc", + "protein_translation": "MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008095" + ], + [ + "gene_synonym", + "ECK2452" + ], + [ + "gene_synonym", + "EcoGene:EG14187" + ], + [ + "gene_synonym", + "GI:90111439" + ], + [ + "gene_synonym", + "GeneID:946942" + ], + [ + "gene_synonym", + "JW2441" + ], + [ + "gene_synonym", + "NP_416952.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABF4" + ], + [ + "gene_synonym", + "b2457" + ], + [ + "gene_synonym", + "cchA" + ], + [ + "gene_synonym", + "eutM" + ], + [ + "gene_synonym", + "yffZ" + ] + ], + "dna_sequence": "ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTGAAAGCTGCGCGCGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAGCCGCGACCGATGCAGGTGCCGCAGCGGCACAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGCGACCTGGAAGAAGTCTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA", + "dna_sequence_length": 294, + "functions": [ + "ethanolamine utilization protein, putative carboxysome structural protein" + ], + "id": "CDS_2437", + "location": [ + [ + "NC_000913", + 2572450, + "-", + 294 + ] + ], + "md5": "b1e0c7315b9ea1126d948b481d0be554", + "parent_gene": "", + "protein_md5": "4c230c6514cdc384596566f76e37b4e9", + "protein_translation": "MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008097" + ], + [ + "gene_synonym", + "ECK2453" + ], + [ + "gene_synonym", + "EcoGene:EG14188" + ], + [ + "gene_synonym", + "GI:16130383" + ], + [ + "gene_synonym", + "GeneID:946940" + ], + [ + "gene_synonym", + "JW2442" + ], + [ + "gene_synonym", + "NP_416953.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77218" + ], + [ + "gene_synonym", + "b2458" + ], + [ + "gene_synonym", + "eutD" + ], + [ + "gene_synonym", + "eutI" + ], + [ + "gene_synonym", + "ypfA" + ] + ], + "dna_sequence": "ATGATTATTGAACGTTGTCGTGAACTGGCGTTGCGAGCGCCCGCCAGAGTGGTTTTTCCGGATGCGTTAGACCAACGTGTGCTGAAAGCCGCGCAATATTTACATCAACAAGGTCTGGCAACGCCCATTCTGGTCGCCAATCCGTTTGAACTTCGTCAGTTTGCGCTCAGTCACGGCGTGGCGATGGACGGGCTACAGGTGATTGATCCGCATGGCAACCTCGCAATGCGGGAAGAATTTGCTCATCGCTGGCTGGCCCGCGCGGGCGAAAAAACGCCGCCGGATGCGCTGGAAAAACTTACCGACCCTCTGATGTTCGCCGCAGCAATGGTCAGCGCCGGTAAAGCGGATGTCTGTATCGCGGGCAACCTCTCTTCCACGGCAAATGTGCTGCGTGCCGGATTACGCATTATCGGCTTGCAGCCAGGCTGTAAAACGCTCTCTTCCATTTTCCTGATGTTGCCACAGTACAGCGGCCCGGCGTTGGGCTTTGCCGATTGCAGCGTGGTGCCACAGCCGACGGCGGCGCAGCTGGCGGATATCGCGCTTGCCAGTGCCGAAACCTGGCGCGCCATCACCGGAGAAGAGCCGCGCGTGGCGATGCTGTCGTTTTCCAGCAATGGTAGCGCCCGTCACCCCTGTGTTGCTAACGTCCAGCAGGCGACAGAAATCGTCCGTGAGCGCGCACCAAAGCTGGTGGTGGATGGCGAGTTACAGTTTGACGCCGCCTTCGTGCCGGAAGTGGCGGCGCAAAAAGCGCCTGCCAGCCCGCTACAGGGCAAGGCCAATGTGATGGTTTTTCCGTCGCTGGAAGCCGGAAATATTGGTTACAAAATCGCACAACGACTCGGCGGATATCGTGCCGTCGGGCCACTGATACAAGGACTTGCCGCGCCGATGCACGATCTCTCTCGTGGTTGTAGCGTGCAGGAAATTATCGAGCTGGCGCTGGTGGCAGCTGTGCCGCGTCAGACAGAAGTGAACCGCGAAAGCAGTTTACAAACACTGGTTGAATGA", + "dna_sequence_length": 1017, + "functions": [ + "phosphate acetyltransferase" + ], + "id": "CDS_2438", + "location": [ + [ + "NC_000913", + 2573505, + "-", + 1017 + ] + ], + "md5": "aa3d2e6e247784d6b108ef28d242bc0b", + "parent_gene": "", + "protein_md5": "6dcf769c6e2ffab65759c3d1287bb666", + "protein_translation": "MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008100" + ], + [ + "gene_synonym", + "ECK2454" + ], + [ + "gene_synonym", + "EcoGene:EG14189" + ], + [ + "gene_synonym", + "GI:16130384" + ], + [ + "gene_synonym", + "GeneID:946939" + ], + [ + "gene_synonym", + "JW2443" + ], + [ + "gene_synonym", + "NP_416954.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65643" + ], + [ + "gene_synonym", + "b2459" + ], + [ + "gene_synonym", + "eutT" + ], + [ + "gene_synonym", + "ypfB" + ] + ], + "dna_sequence": "ATGAAAGATTTCATCACCGAAGCATGGCTAAGAGCGAACCATACGCTCAGCGAAGGCGCAGAGATCCATCTCCCTGCGGACAGTCGCCTGACGCCCTCTGCCCGGGAGTTGCTGGAAAGCCGCCATCTGCGCATCAAGTTTATTGACGAGCAGGGCCGCCTGTTTGTTGACGATGAACAGCAGCAGCCGCAGCCCGTTCATGGGCTGACCAGTAGCGATGAACATCCGCAGGCGTGCTGCGAACTGTGTCGCCAGCCGGTGGCAAAAAAGCCGGATACGCTGACTCACCTGTCGGCGGAAAAAATGGTCGCCAAAAGCGATCCGCGTCTGGGTTTTCGCGCGGTTCTCGACAGCACCATTGCGCTGGCAGTGTGGCTGCAAATTGAACTGGCGGAACCGTGGCAGCCGTGGCTGGCGGATATCCGTTCGCGTCTTGGCAACATTATGCGCGCCGATGCGCTGGGGGAACCGCTGGGCTGCCAGGCGATTGTCGGGCTTTCTGACGAAGATCTGCATCGGCTTTCTCATCAGCCGCTGCGCTATCTCGACCACGATCATCTGGTGCCGGAAGCCAGCCACGGGCGCGATGCTGCGTTGCTCAATCTGCTACGCACCAAAGTGCGGGAAACCGAAACCGTAGCGGCGCAGGTCTTTATCACCCGCAGCTTTGAAGTATTACGCCCGGACATTTTGCAGGCGCTGAACCGCCTTTCGAGCACGGTCTACGTGATGATGATCCTGAGCGTAACGAAGCAGCCGCTAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGA", + "dna_sequence_length": 804, + "functions": [ + "cobalamin adenosyltransferase involved in ethanolamine utilization" + ], + "id": "CDS_2439", + "location": [ + [ + "NC_000913", + 2574305, + "-", + 804 + ] + ], + "md5": "68a448b1cf7795b12d25ccf2bad987d4", + "parent_gene": "", + "protein_md5": "673bc2f15054f93501586c9caea997bf", + "protein_translation": "MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQ", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008102" + ], + [ + "gene_synonym", + "ECK2455" + ], + [ + "gene_synonym", + "EcoGene:EG14190" + ], + [ + "gene_synonym", + "GI:16130385" + ], + [ + "gene_synonym", + "GeneID:946935" + ], + [ + "gene_synonym", + "JW2444" + ], + [ + "gene_synonym", + "NP_416955.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76555" + ], + [ + "gene_synonym", + "b2460" + ], + [ + "gene_synonym", + "eutQ" + ], + [ + "gene_synonym", + "ypfC" + ] + ], + "dna_sequence": "GTGAAAAAACTCATCACAGCGAATGATATTCGTGAAGCACACGCGCGCGGCGAACAGGCAATGTCCGTGGTTCTGCGCGCCAGCATTATTACCCCGGAAGCCCGTGAAGTGGCGGATCTACTGGGTTTTACCATCACCGAATGTGATGAATCGATCCCGGTAACGGCGTCCGTGCCCGCCAGCGTGCCAGCCGACAAAACCGAAAGCCAGCGCATCCGCGAAACCATCATTGCCCAGCTGCCGGAAGGCCAGTTTACCGAAAGCCTGGTCGCACAGCTGATGGAAAAAGTGATGAAGGAAAAACAGTCGCTGGAGCAGGGCGCAATGCAGCCGAGCTTCAAATCGGTGACCGGCAAAGGCGGCATCAAAGTGATTGATGGCAGTAGCGTCAAGTTTGGTCGTTTCGACGGCGCAGAGCCGCATTGCGTGGGCTTGACTGATCTTGTGACCGGAGACGACGGCAGCAGCATGGCCGCCGGTTTTATGCAGTGGGAGAACGCATTCTTCCCGTGGACCCTGAACTACGACGAAATCGACATGGTGCTGGAAGGGGAGCTGCATGTTCGCCACGAAGGCCAAACCATGATCGCCAAAGCAGGCGACGTGATGTTTATCCCGAAAGGCTCCAGCATCGAATTTGGTACGACATCCAGCGTGAAATTCCTGTATGTCGCCTGGCCGGCTAACTGGCAATCCCTATGA", + "dna_sequence_length": 702, + "functions": [ + "RmlC-like cupin domain protein" + ], + "id": "CDS_2440", + "location": [ + [ + "NC_000913", + 2575003, + "-", + 702 + ] + ], + "md5": "19135312ef53d825d8344e15b757a540", + "parent_gene": "", + "protein_md5": "321d8c002e693621d0b00edcd7e34940", + "protein_translation": "MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFTITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQSLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAGFMQWENAFFPWTLNYDEIDMVLEGELHVRHEGQTMIAKAGDVMFIPKGSSIEFGTTSSVKFLYVAWPANWQSL", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008105" + ], + [ + "gene_synonym", + "ECK2456" + ], + [ + "gene_synonym", + "EcoGene:EG14191" + ], + [ + "gene_synonym", + "GI:16130386" + ], + [ + "gene_synonym", + "GeneID:946933" + ], + [ + "gene_synonym", + "JW2445" + ], + [ + "gene_synonym", + "NP_416956.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76556" + ], + [ + "gene_synonym", + "b2461" + ], + [ + "gene_synonym", + "eutP" + ], + [ + "gene_synonym", + "ypfD" + ] + ], + "dna_sequence": "ATGAAACGAATTGCGTTTGTGGGTAGCGTCGGGGCAGGAAAAACAACGTTATTTAATGCGTTGCAGGGGAATTATACCCTCGCCAGAAAAACACAGGCCGTGGAATTTAATGATAAGGGCGATATTGATACGCCGGGTGAATATTTTAACCATCCCCGCTGGTATCACGCCTTAATTACCACGCTACAGGATGTAGACATGCTGATCTATGTCCATGGCGCAAATGACCCGGAAAGTCGGTTGCCTGCCGGGTTGCTGGATATTGGCGTCAGCAAACGGCAAATCGCCGTCATCAGTAAAACGGACATGCCAGATGCTGACGTCGCCGCAACGCGAAAGTTATTGCTTGAGACGGGTTTCGAAGAGCCGATGTTCGAGCTAAACAGCCACGACCCGCAAAGCGTGCAGCAACTGGTGGATTATCTGGCATCTCTCACCAAACAGGAGGAAGCAGGTGAAAAAACTCATCACAGCGAATGA", + "dna_sequence_length": 480, + "functions": [ + "putative P-loop NTPase ethanolamine utilization protein" + ], + "id": "CDS_2441", + "location": [ + [ + "NC_000913", + 2575457, + "-", + 480 + ] + ], + "md5": "701cc1082e7b91f08959cbba918bf18f", + "parent_gene": "", + "protein_md5": "0b933fc751499c9748c43b1ad98a1ac3", + "protein_translation": "MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008108" + ], + [ + "gene_synonym", + "ECK2457" + ], + [ + "gene_synonym", + "EcoGene:EG14192" + ], + [ + "gene_synonym", + "GI:90111440" + ], + [ + "gene_synonym", + "GeneID:946936" + ], + [ + "gene_synonym", + "JW2446" + ], + [ + "gene_synonym", + "NP_416957.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63746" + ], + [ + "gene_synonym", + "b2462" + ], + [ + "gene_synonym", + "eutS" + ], + [ + "gene_synonym", + "ypfE" + ] + ], + "dna_sequence": "ATGGATAAAGAACGCATCATTCAGGAATTTGTGCCCGGCAAACAGGTCACACTGGCGCATCTCATCGCGCATCCCGGTGAGGAACTGGCGAAGAAAATCGGCGTTCCGGATGCGGGCGCAATTGGCATTATGACGCTAACTCCCGGCGAAACGGCGATGATCGCCGGTGATTTAGCGCTGAAAGCCGCTGATGTGCATATCGGTTTTCTCGACCGATTCAGCGGTGCATTGGTGATTTATGGCTCGGTGGGCGCAGTAGAAGAAGCGTTATCACAAACCGTCAGCGGTTTAGGTCGCTTATTAAATTATACGCTTTGTGAAATGACCAAAAGTTAA", + "dna_sequence_length": 336, + "functions": [ + "putative ethanol utilization carboxysome structural protein" + ], + "id": "CDS_2442", + "location": [ + [ + "NC_000913", + 2575805, + "-", + 336 + ] + ], + "md5": "cade4d384b5212f31340dbb125bc678c", + "parent_gene": "", + "protein_md5": "c19304397ac23e2aa387684ae488c741", + "protein_translation": "MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008111" + ], + [ + "gene_synonym", + "ECK2458" + ], + [ + "gene_synonym", + "EcoGene:EG14193" + ], + [ + "gene_synonym", + "GI:16130388" + ], + [ + "gene_synonym", + "GeneID:946947" + ], + [ + "gene_synonym", + "JW2447" + ], + [ + "gene_synonym", + "NP_416958.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76558" + ], + [ + "gene_synonym", + "b2463" + ], + [ + "gene_synonym", + "maeB" + ], + [ + "gene_synonym", + "ypfF" + ] + ], + "dna_sequence": "ATGGATGACCAGTTAAAACAAAGTGCACTTGATTTCCATGAATTTCCAGTTCCAGGGAAAATCCAGGTTTCTCCAACCAAGCCTCTGGCAACACAGCGCGATCTGGCGCTGGCCTACTCACCAGGCGTTGCCGCACCTTGTCTTGAAATCGAAAAAGACCCGTTAAAAGCCTACAAATATACCGCCCGAGGTAACCTGGTGGCGGTGATCTCTAACGGTACGGCGGTGCTGGGGTTAGGCAACATTGGCGCGCTGGCAGGCAAACCGGTGATGGAAGGCAAGGGCGTTCTGTTTAAGAAATTCGCCGGGATTGATGTATTTGACATTGAAGTTGACGAACTCGACCCGGACAAATTTATTGAAGTTGTCGCCGCGCTCGAACCAACCTTCGGCGGCATCAACCTCGAAGACATTAAAGCGCCAGAATGTTTCTATATTGAACAGAAACTGCGCGAGCGGATGAATATTCCGGTATTCCACGACGATCAGCACGGCACGGCAATTATCAGCACTGCCGCCATCCTCAACGGCTTGCGCGTGGTGGAGAAAAACATCTCCGACGTGCGGATGGTGGTTTCCGGCGCGGGTGCCGCAGCAATCGCCTGTATGAACCTGCTGGTAGCGCTGGGTCTGCAAAAACATAACATCGTGGTTTGCGATTCAAAAGGCGTTATCTATCAGGGCCGTGAGCCAAACATGGCGGAAACCAAAGCCGCATATGCGGTGGTGGATGACGGCAAACGTACCCTCGATGATGTGATTGAAGGCGCGGATATTTTCCTGGGCTGTTCCGGCCCGAAAGTGCTGACCCAGGAAATGGTGAAGAAAATGGCTCGTGCGCCAATGATCCTGGCGCTGGCGAACCCGGAACCGGAAATTCTGCCGCCGCTGGCGAAAGAAGTGCGTCCGGATGCCATCATTTGCACCGGTCGTTCTGACTATCCGAACCAGGTGAACAACGTCCTGTGCTTCCCGTTCATCTTCCGTGGCGCGCTGGACGTTGGCGCAACCGCCATCAACGAAGAGATGAAACTGGCGGCGGTACGTGCGATTGCAGAACTCGCCCATGCGGAACAGAGCGAAGTGGTGGCTTCAGCGTATGGCGATCAGGATCTGAGCTTTGGTCCGGAATACATCATTCCAAAACCGTTTGATCCGCGCTTGATCGTTAAGATCGCTCCTGCGGTCGCTAAAGCCGCGATGGAGTCGGGCGTGGCGACTCGTCCGATTGCTGATTTCGACGTCTACATCGACAAGCTGACTGAGTTCGTTTACAAAACCAACCTGTTTATGAAGCCGATTTTCTCCCAGGCTCGCAAAGCGCCGAAGCGCGTTGTTCTGCCGGAAGGGGAAGAGGCGCGCGTTCTGCATGCCACTCAGGAACTGGTAACGCTGGGACTGGCGAAACCGATCCTTATCGGTCGTCCGAACGTGATCGAAATGCGCATTCAGAAACTGGGCTTGCAGATCAAAGCGGGCGTTGATTTTGAGATCGTCAATAACGAATCCGATCCGCGCTTTAAAGAGTACTGGACCGAATACTTCCAGATCATGAAGCGTCGCGGCGTCACTCAGGAACAGGCGCAGCGGGCGCTGATCAGTAACCCGACAGTGATCGGCGCGATCATGGTTCAGCGTGGGGAAGCCGATGCAATGATTTGCGGTACGGTGGGTGATTATCATGAACATTTTAGCGTGGTGAAAAATGTCTTTGGTTATCGCGATGGCGTTCACACCGCAGGTGCCATGAACGCGCTGCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACCGGATGCAGAAGAGCTGGCGGAGATCACCTTGATGGCGGCAGAAACTGTCCGTCGTTTTGGTATTGAGCCGCGCGTTGCTTTGTTGTCGCACTCCAACTTTGGTTCTTCTGACTGCCCGTCGTCGAGCAAAATGCGTCAGGCGCTGGAACTGGTCAGGGAACGTGCACCAGAACTGATGATTGATGGTGAAATGCACGGCGATGCAGCGCTGGTGGAAGCGATTCGCAACGACCGTATGCCGGACAGCTCTTTGAAAGGTTCCGCCAATATTCTGGTGATGCCGAACATGGAAGCTGCCCGCATTAGTTACAACTTACTGCGTGTTTCCAGCTCGGAAGGTGTGACTGTCGGCCCGGTGCTGATGGGTGTGGCGAAACCGGTTCACGTGTTAACGCCGATCGCATCGGTGCGTCGTATCGTCAACATGGTGGCGCTGGCCGTGGTAGAAGCGCAAACCCAACCGCTGTAA", + "dna_sequence_length": 2280, + "functions": [ + "malic enzyme: putative oxidoreductase/phosphotransacetylase" + ], + "id": "CDS_2443", + "location": [ + [ + "NC_000913", + 2578377, + "-", + 2280 + ] + ], + "md5": "ad85bbc64befb686f0a499d103f594a9", + "parent_gene": "", + "protein_md5": "90996f0f25a2e513f36da389a5d2166d", + "protein_translation": "MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAPELMIDGEMHGDAALVEAIRNDRMPDSSLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQPL", + "protein_translation_length": 759, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008115" + ], + [ + "gene_synonym", + "ECK2459" + ], + [ + "gene_synonym", + "EcoGene:EG11797" + ], + [ + "gene_synonym", + "GI:16130389" + ], + [ + "gene_synonym", + "GeneID:947006" + ], + [ + "gene_synonym", + "JW2448" + ], + [ + "gene_synonym", + "NP_416959.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A867" + ], + [ + "gene_synonym", + "b2464" + ], + [ + "gene_synonym", + "talA" + ] + ], + "dna_sequence": "ATGAACGAGTTAGACGGCATCAAACAGTTCACCACTGTCGTGGCAGACAGCGGCGATATTGAGTCCATTCGCCATTATCATCCCCAGGATGCCACCACCAATCCTTCGCTGTTACTCAAAGCTGCCGGATTATCACAATATGAGCATTTAATAGACGATGCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGAACAACAGGTGGTCGCAGCGTGTGACAAACTGGCGGTCAATTTCGGTGCTGAAATCCTCAAAATCGTACCCGGTCGCGTGTCAACAGAAGTTGATGCACGCCTCTCTTTTGATAAAGAAAAGAGTATTGAGAAGGCGCGCCATCTGGTGGACTTGTATCAGCAACAAGGCGTTGAGAAATCACGCATTCTGATCAAGCTGGCTTCGACCTGGGAAGGAATTCGCGCGGCAGAAGAGCTGGAAAAAGAAGGTATTAACTGCAACCTGACGCTGCTGTTTTCTTTTGCACAGGCACGGGCCTGTGCGGAAGCAGGCGTTTTTCTGATTTCGCCGTTTGTCGGGCGTATTTATGACTGGTATCAGGCACGCAAGCCGATGGACCCGTATGTGGTGGAAGAAGATCCGGGCGTTAAATCGGTGCGCAATATCTACGACTACTATAAGCAACACCACTATGAAACCATTGTGATGGGCGCGAGCTTCCGTCGCACCGAACAAATCCTCGCCTTAACCGGCTGCGATCGACTGACTATCGCACCGAATTTACTGAAGGAGCTGCAGGAAAAAGTTTCGCCAGTGGTACGTAAATTAATCCCACCTTCTCAGACGTTCCCACGCCCAGCTCCCATGAGCGAAGCGGAGTTCCGTTGGGAGCACAATCAGGATGCGATGGCGGTAGAAAAACTGTCTGAAGGCATTCGTCTGTTCGCCGTTGATCAACGCAAACTGGAAGATCTTCTTGCCGCCAAACTATAA", + "dna_sequence_length": 951, + "functions": [ + "transaldolase A" + ], + "id": "CDS_2444", + "location": [ + [ + "NC_000913", + 2578666, + "+", + 951 + ] + ], + "md5": "a4fa2dca76c40d5dcafe3c268cf2aac9", + "parent_gene": "", + "protein_md5": "fe506aea138ef6a4ad7fb74ea420b651", + "protein_translation": "MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLSQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSFDKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008117" + ], + [ + "gene_synonym", + "ECK2460" + ], + [ + "gene_synonym", + "EcoGene:EG12100" + ], + [ + "gene_synonym", + "GI:16130390" + ], + [ + "gene_synonym", + "GeneID:945865" + ], + [ + "gene_synonym", + "JW2449" + ], + [ + "gene_synonym", + "NP_416960.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33570" + ], + [ + "gene_synonym", + "b2465" + ], + [ + "gene_synonym", + "tktB" + ] + ], + "dna_sequence": "ATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTACAAAAAGCCAACTCTGGTCATCCCGGCGCGCCGATGGGCATGGCTGATATTGCCGAAGTGCTGTGGAACGATTTTCTTAAACATAACCCTACCGACCCAACCTGGTATGATCGCGACCGCTTTATTCTTTCCAACGGTCACGCGTCGATGCTGCTCTACAGTTTGCTACATCTGACCGGTTACGACCTGCCGCTGGAAGAACTGAAGAACTTCCGTCAGTTGCATTCGAAAACCCCAGGCCACCCGGAGATTGGCTATACGCCAGGCGTTGAAACCACCACCGGCCCGCTTGGACAAGGTTTGGCGAACGCCGTCGGGCTGGCGATAGCAGAGCGTACACTGGCGGCGCAGTTTAACCAGCCAGACCATGAGATCGTCGATCACTTCACCTATGTGTTTATGGGCGACGGCTGCCTGATGGAAGGTATTTCCCACGAAGTCTGTTCGCTGGCAGGCACGCTGGGACTGGGCAAGCTGATTGGTTTTTACGATCACAACGGTATTTCCATCGACGGTGAAACAGAAGGCTGGTTTACCGACGATACGGCAAAACGTTTTGAAGCCTATCACTGGCATGTGATCCATGAAATCGACGGTCACGATCCGCAGGCGGTGAAGGAAGCGATCCTTGAAGCGCAAAGCGTGAAAGATAAGCCGTCGCTGATTATCTGCCGTACGGTGATTGGCTTTGGTTCGCCGAATAAAGCAGGTAAGGAAGAGGCGCACGGCGCACCACTGGGGGAAGAAGAAGTGGCGCTGGCACGGCAAAAACTGGGCTGGCACCATCCGCCATTTGAGATCCCTAAAGAGATTTATCACGCCTGGGATGCCCGTGAAAAAGGCGAAAAAGCGCAGCAGAGCTGGAATGAGAAGTTTGCCGCCTATAAAAAGGCTCATCCGCAACTGGCAGAAGAGTTTACCCGACGGATGAGCGGTGGTTTACCGAAGGACTGGGAGAAAACGACTCAGAAATATATCAATGAGTTACAGGCAAATCCGGCGAAAATCGCTACCCGTAAGGCTTCGCAAAATACGCTTAACGCTTACGGGCCGATGCTGCCTGAGTTGCTCGGCGGTTCGGCGGATCTGGCTCCCAGCAACCTGACCATCTGGAAAGGTTCTGTTTCGCTGAAGGAAGATCCAGCGGGCAACTACATTCACTACGGGGTGCGTGAATTTGGCATGACCGCTATCGCCAACGGCATCGCGCACCACGGCGGCTTTGTGCCGTATACCGCGACGTTCCTGATGTTTGTTGAATACGCCCGTAACGCCGCGCGGATGGCGGCACTGATGAAAGCGCGGCAGATTATGGTTTATACCCACGACTCAATTGGCCTGGGCGAAGATGGTCCGACGCACCAGGCTGTTGAGCAACTGGCCAGCCTGCGCTTAACGCCAAATTTCAGCACCTGGCGACCGTGCGATCAGGTGGAAGCGGCGGTGGGCTGGAAGCTGGCGGTTGAGCGCCACAACGGACCGACGGCACTGATCCTCTCAAGGCAGAATCTGGCCCAGGTGGAACGTACGCCGGATCAGGTTAAAGAGATTGCTCGTGGCGGTTATGTGCTGAAAGACAGCGGCGGTAAGCCAGATATTATTCTGATTGCCACCGGTTCAGAGATGGAAATTACCCTGCAAGCGGCAGAGAAATTAGCAGGAGAAGGTCGCAATGTACGCGTAGTTTCCCTGCCCTCGACCGATATTTTCGACGCCCAGGATGAGGAATATCGGGAGTCGGTGTTGCCTTCTAACGTTGCGGCTCGCGTGGCGGTGGAAGCAGGTATTGCCGATTACTGGTACAAGTATGTTGGTCTGAAAGGGGCAATTGTCGGGATGACGGGTTACGGGGAATCTGCTCCGGCGGATAAGCTGTTCCCGTTCTTTGGCTTTACCGCCGAGAATATTGTGGCAAAAGCGCATAAGGTGCTGGGAGTGAAAGGTGCCTGA", + "dna_sequence_length": 2004, + "functions": [ + "transketolase 2, thiamine triphosphate-binding" + ], + "id": "CDS_2445", + "location": [ + [ + "NC_000913", + 2579636, + "+", + 2004 + ] + ], + "md5": "8d3953949836401bde312bdb86f6b088", + "parent_gene": "", + "protein_md5": "764ab033a4f56e547067b601a3c64ab2", + "protein_translation": "MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA", + "protein_translation_length": 667, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008120" + ], + [ + "gene_synonym", + "ECK2461" + ], + [ + "gene_synonym", + "EcoGene:EG14194" + ], + [ + "gene_synonym", + "GI:16130391" + ], + [ + "gene_synonym", + "GeneID:946828" + ], + [ + "gene_synonym", + "JW2450" + ], + [ + "gene_synonym", + "NP_416961.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76559" + ], + [ + "gene_synonym", + "b2466" + ], + [ + "gene_synonym", + "ypfG" + ] + ], + "dna_sequence": "ATGCGCTATCGCATTTTCCTTCTCTTTTTTTTCGCTTTGTTGCCGACGTCTTTGGTGTGGGCGGCACCAGCGCAACGGGCGTTTTCCGACTGGCAGGTCACCTGTAATAACCAAAATTTCTGCGTGGCGCGTAATACGGGCGATCATAATGGACTGGTGATGACCCTGAGCCGCAGCGCCGGGGCGCATACCGATGCCGTTTTACGTATTGAGCGCGGCGGATTGAAGTCGCCGGAGGCGTCAGAAGGGGAGATAGCGCCACGGCTGCTGTTAGATGGCGAGCCGTTGGCGTTAAGTGGTGACAAGTGGCGGATTTCACCATGGTTATTAGTAACCGATGATACGGCAACCATCACCGCGTTTTTGCAGATGATTCAGGAAGGGAAGGCAATCACCTTACGCGATGGCGATCAGACCATTTCTCTGAGTGGCTTAAAAGCAGCGTTGTTGTTTATTGATGCTCAGCAAAAGCGCGTTGGCAGTGAAACCGCGTGGATCAAGAAAGGGGACGAACCGCCGCTCAGCGTACCGCCCGCGCCTGCGCTGAAAGAGGTCGCGGTGGTTAACCCAACGCCGACGCCACTCTCACTCGAAGAACGCAACGATTTGCTGGATTATGGAAACTGGCGGATGAATGGTCTGCGCTGCTCGCTTGATCCATTGCGTCGTGAGGTGAATGTCACTGCGCTGACTGATGATAAAGCGCTGATGATGATTAGCTGTGAGGCAGGGGCCTATAACACCATTGATTTGGCATGGATTGTGTCGCGTAAAAAGCCACTAGCTTCGCGCCCGGTTCGGTTGCGTTTGCCGTTCAACAACGGTCAGGAGACGAATGAACTGGAACTGATGAACGCAACATTTGATGAGAAATCGCGTGAACTGGTGACCTTAGCGAAAGGGCGCGGATTAAGCGATTGTGGCATTCAGGCGCGCTGGCGCTTTGACGGTCAGCGTTTTCGCCTGGTGCGTTACGCCGCAGAACCCACCTGCGATAACTGGCATGGGCCAGACGCCTGGCCCACGTTGTGGATCACCCGTTAA", + "dna_sequence_length": 1044, + "functions": [ + "DUF1176 family protein" + ], + "id": "CDS_2446", + "location": [ + [ + "NC_000913", + 2582777, + "-", + 1044 + ] + ], + "md5": "d4fc1ba339cf29ad05e2604813ac3bda", + "parent_gene": "", + "protein_md5": "e225df92eaca90364c47c581e790371b", + "protein_translation": "MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008123" + ], + [ + "gene_synonym", + "ECK2462" + ], + [ + "gene_synonym", + "EcoGene:EG12410" + ], + [ + "gene_synonym", + "GI:16130392" + ], + [ + "gene_synonym", + "GeneID:947072" + ], + [ + "gene_synonym", + "JW2451" + ], + [ + "gene_synonym", + "NP_416962.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37128" + ], + [ + "gene_synonym", + "b2467" + ], + [ + "gene_synonym", + "nudK" + ], + [ + "gene_synonym", + "yffH" + ] + ], + "dna_sequence": "ATGACGCAACAAATCACCCTCATTAAAGACAAAATTCTCTCCGATAACTATTTCACCCTGCACAACATTACTTACGATCTCACGCGCAAAGACGGCGAAGTTATCCGCCATAAACGTGAAGTGTACGATCGCGGCAATGGTGCGACGATCCTCCTGTACAACACGAAGAAAAAGACCGTGGTTCTGATTCGTCAGTTCCGTGTCGCTACCTGGGTTAATGGCAATGAAAGCGGGCAGCTGATTGAAAGCTGCGCCGGGCTGCTGGATAACGACGAACCGGAAGTGTGTATTCGCAAAGAAGCGATTGAAGAGACGGGCTATGAAGTGGGTGAAGTGCGCAAATTATTTGAACTGTATATGTCGCCAGGCGGTGTGACTGAGCTAATCCACTTTTTTATCGCCGAATACAGTGACAATCAGCGCGCTAACGCCGGTGGCGGTGTCGAAGATGAAGATATTGAAGTGCTCGAGCTGCCGTTCAGCCAGGCGCTGGAGATGATCAAAACCGGCGAGATACGTGACGGTAAGACGGTGTTATTGCTTAACTATTTGCAAACGTCACATTTAATGGACTGA", + "dna_sequence_length": 576, + "functions": [ + "GDP-mannose pyrophosphatase" + ], + "id": "CDS_2447", + "location": [ + [ + "NC_000913", + 2583478, + "-", + 576 + ] + ], + "md5": "499bc5ada765e193ba74620ad463eea3", + "parent_gene": "", + "protein_md5": "58d8812bf4ba5e8a835e39f72b0e4ec2", + "protein_translation": "MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008127" + ], + [ + "gene_synonym", + "ECK2463" + ], + [ + "gene_synonym", + "EcoGene:EG12409" + ], + [ + "gene_synonym", + "GI:16130393" + ], + [ + "gene_synonym", + "GeneID:947383" + ], + [ + "gene_synonym", + "JW2452" + ], + [ + "gene_synonym", + "NP_416963.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37127" + ], + [ + "gene_synonym", + "aegA" + ], + [ + "gene_synonym", + "b2468" + ], + [ + "gene_synonym", + "yffG" + ] + ], + "dna_sequence": "ATGAATCGTTTTATTATGGCCAACAGTCAGCAATGTCTGGGTTGTCATGCTTGTGAAATCGCCTGTGTCATGGCTCACAATGATGAGCAACATGTCCTGAGCCAACACCATTTTCATCCCCGAATTACGGTTATCAAACATCAACAGCAACGTAGTGCAGTGACCTGTCACCATTGTGAAGATGCGCCCTGCGCCCGTAGCTGCCCTAATGGCGCAATCAGCCACGTTGATGACAGCATTCAGGTCAATCAGCAAAAGTGTATTGGCTGTAAATCCTGCGTGGTGGCCTGTCCTTTTGGTACGATGCAAATCGTCCTGACACCCGTCGCGGCAGGAAAAGTAAAAGCCACGGCGCATAAATGCGACCTTTGTGCGGGGCGCGAAAACGGTCCTGCCTGTGTTGAGAATTGCCCGGCGGACGCGCTGCAACTGGTCACTGACGTCGCACTCTCCGGCATGGCGAAATCCCGCCGCTTGCGCACCGCGCGTCAGGAACATCAACCGTGGCATGCCAGTACCGCGGCGCAAGAAATGCCGGTAATGAGTAAAGTCGAACAAATGCAGGCAACGCCCGCGCGTGGCGAGCCGGATAAACTGGCGATTGAAGCGCGCAAAACCGGTTTTGATGAAATTTATCTGCCATTTCGCGCCGACCAGGCACAACGGGAAGCCTCGCGCTGCCTTAAGTGCGGCGAGCACAGCGTTTGTGAATGGACCTGCCCGCTGCATAACCATATACCGCAGTGGATTGAACTGGTGAAAGCCGGAAACATCGACGCCGCCGTCGAGCTTTCTCACCAGACCAACACCCTGCCGGAAATTACCGGACGCGTTTGTCCGCAAGACCGTTTGTGTGAAGGTGCCTGTACTATTCGCGATGAGCACGGCGCGGTAACTATCGGCAACATTGAACGCTACATTTCAGATCAGGCGTTGGCGAAAGGTTGGCGTCCTGACTTAAGCCATGTCACCAAAGTGGACAAGCGGGTGGCGATTATCGGTGCAGGTCCGGCAGGGCTGGCCTGTGCGGATGTTCTGACCCGCAATGGCGTGGGGGTGACGGTGTACGATCGCCATCCAGAAATCGGTGGCTTGCTCACTTTCGGCATTCCTTCTTTCAAACTGGATAAATCCCTGCTGGCACGCCGTCGGGAAATCTTCAGCGCGATGGGGATTCACTTCGAACTCAATTGTGAAGTGGGTAAAGATGTCTCTTTGGATTCGCTTTTGGAACAATACGACGCGGTCTTCGTTGGCGTAGGCACTTACCGTTCCATGAAAGCGGGTTTACCCAATGAAGATGCGCCGGGCGTTTATGACGCGCTGCCGTTCCTCATTGCCAACACTAAACAGGTGATGGGGCTCGAAGAGCTACCGGAAGAGCCGTTTATCAATACCGCCGGACTTAACGTCGTGGTACTGGGCGGCGGCGACACCGCGATGGACTGTGTGCGTACCGCACTGCGCCACGGCGCGAGTAACGTCACCTGCGCTTATCGTCGTGATGAAGCTAACATGCCAGGCTCGAAGAAAGAAGTGAAGAACGCCCGCGAAGAGGGGGCCAACTTCGAATTTAACGTCCAGCCGGTGGCGCTTGAGCTGAATGAACAAGGTCACGTCTGCGGGATTCGTTTCCTGCGCACGCGTCTTGGAGAGCCGGATGCCCAGGGGCGTCGGCGTCCAGTGCCGGTGGAAGGCAGTGAATTTGTCATGCCAGCCGACGCGGTGATTATGGCGTTTGGCTTCAATCCGCACGGGATGCCGTGGCTGGAGTCGCACGGTGTAACGGTAGACAAATGGGGCCGCATCATCGCGGATGTGGAAAGCCAGTACCGTTACCAGACCACCAATCCGAAAATCTTCGCTGGTGGTGACGCCGTGCGTGGTGCGGATCTGGTGGTTACCGCAATGGCAGAAGGACGTCATGCGGCACAGGGGATTATTGACTGGCTGGGGGTAAAATCAGTCAAATCTCACTGA", + "dna_sequence_length": 1980, + "functions": [ + "putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit" + ], + "id": "CDS_2448", + "location": [ + [ + "NC_000913", + 2585525, + "-", + 1980 + ] + ], + "md5": "534cfac9052d4cff49d04234f2e97b4a", + "parent_gene": "", + "protein_md5": "cb522af96a5755bd7714deec2b0a97c6", + "protein_translation": "MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLRTARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH", + "protein_translation_length": 659, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008132" + ], + [ + "gene_synonym", + "ECK2464" + ], + [ + "gene_synonym", + "EcoGene:EG11460" + ], + [ + "gene_synonym", + "GI:16130394" + ], + [ + "gene_synonym", + "GeneID:946948" + ], + [ + "gene_synonym", + "JW2453" + ], + [ + "gene_synonym", + "NP_416964.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27896" + ], + [ + "gene_synonym", + "b2469" + ], + [ + "gene_synonym", + "narQ" + ] + ], + "dna_sequence": "GTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGTCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGGAGATGAATAATCGGCTCAGCAAGGGCGATTTGCCGTGGTATCAGGCCAATATTAATAATTATGTTAATCAGATAGACCTGTTCGTACTGGCTTTACAGCACTACGCTGAACGCAAAATGCTGCTGGTGGTGGCGATTTCCCTGGCTGGCGGCATCGGTATTTTCACGCTGGTCTTTTTTACTTTGCGCCGCATACGCCATCAGGTGGTTGCCCCGCTGAATCAGCTGGTTACCGCCAGTCAGCGTATTGAACACGGGCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCGGTGAAAACTGGCGGATTAGCGAAGGGCAACCAAACCCGGAATTGCCGATGCAGATTTTACCGGTGACAATGCAAGAGACGGTTTACGGCGAACTGCACTGGCAAAATAGTCACGTTTCATCATCAGAACCGCTGCTTAACAGCGTTTCGTCGATGCTGGGACGCGGTTTGTACTTTAATCAGGCGCAGAAGCATTTTCAGCAATTATTGTTGATGGAAGAACGTGCGACCATCGCCCGCGAATTGCACGACTCGCTGGCTCAGGTACTTTCTTACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTCACAACCTTCCGGCGGCGGCACGTTAGTGAGTATTAGCTTTCGCTCTGCGGAGGGTGAGGAAAGTCAGTTAATGTAA", + "dna_sequence_length": 1701, + "functions": [ + "sensory histidine kinase in two-component regulatory system with NarP" + ], + "id": "CDS_2449", + "location": [ + [ + "NC_000913", + 2585731, + "+", + 1701 + ] + ], + "md5": "1a79ca32a2c021c84f59a351208ba5c0", + "parent_gene": "", + "protein_md5": "2b1bdcea00f67baf4db3a84d009d82eb", + "protein_translation": "MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM", + "protein_translation_length": 566, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008136" + ], + [ + "gene_synonym", + "ECK2465" + ], + [ + "gene_synonym", + "EcoGene:EG10014" + ], + [ + "gene_synonym", + "GI:16130395" + ], + [ + "gene_synonym", + "GeneID:945464" + ], + [ + "gene_synonym", + "JW2454" + ], + [ + "gene_synonym", + "NP_416965.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24177" + ], + [ + "gene_synonym", + "acrD" + ], + [ + "gene_synonym", + "b2470" + ], + [ + "gene_synonym", + "yffA" + ] + ], + "dna_sequence": "ATGGCGAATTTCTTTATTGATCGCCCCATTTTTGCCTGGGTGCTGGCAATCCTGTTGTGTCTGACAGGTACCCTGGCGATTTTTTCATTGCCCGTTGAACAATACCCCGATCTCGCGCCACCGAATGTGCGAGTGACCGCTAACTATCCCGGCGCATCGGCCCAGACGCTGGAAAACACCGTGACCCAGGTTATCGAGCAAAATATGACCGGCCTCGATAATCTCATGTATATGTCATCTCAGAGCAGTGGCACCGGTCAGGCATCTGTCACTTTAAGTTTTAAAGCAGGCACCGATCCGGACGAAGCCGTGCAGCAAGTACAAAACCAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTGCGTAAAACCGGCGATACCAACATTCTGACCATTGCCTTCGTCTCTACCGATGGTTCGATGGATAAACAGGATATTGCTGATTATGTTGCCAGTAATATTCAGGACCCGTTAAGCCGCGTGAATGGCGTCGGGGATATCGATGCCTATGGTTCGCAATATTCCATGCGTATCTGGCTGGACCCGGCGAAACTCAACAGTTTCCAGATGACGGCTAAAGATGTCACTGATGCCATTGAGTCACAGAACGCGCAGATTGCGGTTGGGCAACTTGGTGGTACACCTTCCGTCGATAAGCAGGCGCTCAACGCCACCATTAACGCCCAGTCACTGCTGCAAACACCAGAACAGTTCCGCGATATCACCTTGCGGGTCAATCAGGACGGCTCAGAGGTAAGGCTGGGCGATGTCGCCACCGTCGAAATGGGGGCGGAGAAATACGATTATCTTAGCCGCTTCAATGGTAAGCCAGCCTCCGGGCTGGGGGTAAAACTGGCCTCCGGCGCTAACGAAATGGCGACAGCGGAGCTGGTGCTCAATCGTCTCGACGAGCTGGCGCAGTATTTCCCGCATGGACTGGAATACAAGGTGGCGTATGAAACCACCTCGTTTGTTAAAGCCTCCATTGAAGACGTGGTGAAAACGCTGCTGGAAGCTATCGCTCTGGTTTTCCTCGTTATGTATCTGTTCCTGCAAAACTTCCGCGCCACGCTGATACCCACTATCGCCGTGCCGGTGGTGTTGATGGGAACCTTCTCCGTACTTTACGCCTTCGGTTACAGCGTCAACACCTTAACCATGTTCGCGATGGTGCTGGCGATCGGTCTGCTGGTGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGTGTTCCTGTTCCTGCGTTTGCCGACGTCGTTCTTACCGCTGGAAGACCGTGGCATGTTTACTACCTCGGTACAGTTGCCCAGCGGTTCAACGCAACAACAGACCCTGAAAGTCGTTGAGCAAATCGAGAAATACTACTTCACCCATGAAAAAGACAACATCATGTCGGTGTTTGCCACCGTTGGTTCTGGCCCTGGGGGTAACGGGCAAAACGTGGCGCGAATGTTTATCCGCCTGAAAGACTGGAGCGAACGCGACAGTAAGACCGGCACCTCGTTTGCCATTATCGAGCGTGCAACGAAGGCGTTTAACCAAATTAAAGAAGCTCGCGTTATCGCCAGCAGCCCGCCAGCAATTAGCGGTCTTGGTAGTTCTGCAGGTTTTGATATGGAGTTGCAGGACCACGCTGGAGCGGGTCACGATGCGCTGATGGCAGCACGTAATCAGTTGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTCCGCAGTTGCAGATTGATATCGACCAGCGTAAAGCTCAGGCGCTGGGCGTTGCTATCGACGATATTAACGACACACTGCAAACCGCCTGGGGTTCGAGCTATGTGAATGACTTTATGGATCGCGGTCGCGTGAAGAAAGTCTATGTGCAGGCAGCTGCGCCGTATCGCATGCTGCCAGATGACATCAATCTCTGGTATGTCCGAAATAAAGATGGCGGCATGGTGCCCTTCTCTGCTTTCGCGACCTCACGCTGGGAAACAGGCTCGCCGCGTCTGGAACGCTATAACGGTTATTCTGCGGTTGAGATTGTTGGGGAAGCCGCACCGGGGGTCAGTACCGGTACGGCGATGGATATTATGGAATCGTTAGTGAAGCAGCTGCCAAACGGCTTTGGTCTGGAGTGGACGGCGATGTCGTATCAGGAGCGGCTTTCCGGCGCGCAGGCTCCGGCGCTGTACGCCATTTCCTTGCTGGTGGTATTCCTGTGTCTGGCTGCGTTGTATGAAAGCTGGTCGGTGCCGTTCTCGGTAATGCTGGTCGTGCCGCTGGGGGTAATCGGCGCGCTGCTGGCAACCTGGATGCGCGGGCTGGAAAACGACGTTTACTTCCAGGTGGGCCTGTTAACGGTCATTGGTTTATCGGCGAAAAACGCCATCCTGATCGTCGAGTTTGCTAACGAGATGAACCAAAAAGGCCACGACCTGTTTGAAGCGACGCTCCACGCCTGCCGTCAGCGTTTACGCCCGATTCTGATGACCTCGCTGGCATTTATCTTCGGCGTATTGCCAATGGCAACCAGCACGGGTGCCGGTTCCGGTGGTCAGCATGCGGTGGGTACTGGCGTAATGGGCGGGATGATTTCGGCCACTATTCTGGCTATTTACTTCGTGCCGCTGTTCTTTGTGCTGGTGCGCCGCCGCTTCCCGCTGAAGCCGCGCCCGGAATAA", + "dna_sequence_length": 3114, + "functions": [ + "aminoglycoside/multidrug efflux system" + ], + "id": "CDS_2450", + "location": [ + [ + "NC_000913", + 2587595, + "+", + 3114 + ] + ], + "md5": "cf5abcc14a99587deef9157c619c7bec", + "parent_gene": "", + "protein_md5": "b3af4f8eb03286d70cd6574827af45a9", + "protein_translation": "MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLLQTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRPE", + "protein_translation_length": 1037, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4415" + ], + [ + "gene_synonym", + "EcoGene:EG14396" + ], + [ + "gene_synonym", + "GI:145698299" + ], + [ + "gene_synonym", + "GeneID:5061513" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A621" + ], + [ + "gene_synonym", + "YP_001165325.1" + ], + [ + "gene_synonym", + "b4606" + ], + [ + "gene_synonym", + "ypfM" + ] + ], + "dna_sequence": "ATGATTGAACGTGAACTGGGGAACTGGAAAGACTTTATCGAAGTTATGCTTCGTAAGTAA", + "dna_sequence_length": 60, + "functions": [ + "stress-induced small enterobacterial protein" + ], + "id": "CDS_2451", + "location": [ + [ + "NC_000913", + 2590866, + "-", + 60 + ] + ], + "md5": "fc6320328ce2ca9c87cebb1d054fdf9b", + "parent_gene": "", + "protein_md5": "d048e6a8d0de121dd80112bb5a3ecce7", + "protein_translation": "MIERELGNWKDFIEVMLRK", + "protein_translation_length": 19, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008140" + ], + [ + "gene_synonym", + "ECK2466" + ], + [ + "gene_synonym", + "EcoGene:EG11147" + ], + [ + "gene_synonym", + "GI:16130396" + ], + [ + "gene_synonym", + "GeneID:946953" + ], + [ + "gene_synonym", + "JW2455" + ], + [ + "gene_synonym", + "NP_416966.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24178" + ], + [ + "gene_synonym", + "b2471" + ], + [ + "gene_synonym", + "yffB" + ] + ], + "dna_sequence": "ATGGTTACACTTTACGGTATCAAAAATTGTGACACCATTAAAAAGGCTCGCCGTTGGCTGGAAGCCAATAACATCGACTATCGTTTTCATGATTACCGCGTCGATGGGCTGGACAGCGAATTATTGAACGATTTTATCAACGAATTAGGCTGGGAAGCGTTACTCAACACCCGTGGTACAACCTGGCGTAAACTGGACGAAACCACCCGCAATAAAATCACCGATGCGGCCTCTGCGGCGGCATTAATGACTGAAATGCCTGCAATTATCAAACGTCCATTGCTCTGCGTGCCCGGTAAGCCTATGCTGCTGGGTTTCAGTGATTCCAGTTATCAGCAATTTTTCCATGAGGTGTAG", + "dna_sequence_length": 357, + "functions": [ + "putative ArsC family reductase" + ], + "id": "CDS_2452", + "location": [ + [ + "NC_000913", + 2591247, + "+", + 357 + ] + ], + "md5": "6cd6825c82041842f636de5f55e346dc", + "parent_gene": "", + "protein_md5": "7c6060b4ddb269f82f872ce2cfb38a7c", + "protein_translation": "MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNDFINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCVPGKPMLLGFSDSSYQQFFHEV", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008142" + ], + [ + "gene_synonym", + "ECK2467" + ], + [ + "gene_synonym", + "EcoGene:EG10208" + ], + [ + "gene_synonym", + "GI:16130397" + ], + [ + "gene_synonym", + "GeneID:948313" + ], + [ + "gene_synonym", + "JW2456" + ], + [ + "gene_synonym", + "NP_416967.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AED7" + ], + [ + "gene_synonym", + "b2472" + ], + [ + "gene_synonym", + "dapE" + ], + [ + "gene_synonym", + "msgB" + ] + ], + "dna_sequence": "ATGTCGTGCCCGGTTATTGAGCTGACACAACAGCTTATTCGCCGCCCTTCCCTGAGTCCTGATGATGCAGGATGCCAGGCTTTGTTGATTGAACGTTTGCAGGCGATCGGTTTTACCGTTGAACGCATGGACTTTGCCGATACGCAGAATTTTTGGGCATGGCGTGGGCAGGGTGAAACGTTAGCCTTTGCCGGGCATACCGACGTGGTGCCGCCTGGCGACGCCGATCGTTGGATCAATCCCCCGTTTGAACCCACCATTCGTGACGGCATGTTATTCGGGCGCGGTGCGGCAGATATGAAAGGCTCGCTGGCGGCGATGGTGGTGGCGGCAGAACGTTTTGTCGCACAACATCCCAACCATACGGGGCGACTGGCATTTCTGATCACCTCTGATGAAGAAGCCAGTGCCCACAACGGTACGGTAAAAGTCGTCGAAGCGTTAATGGCACGTAATGAGCGTCTCGATTACTGCCTGGTTGGCGAACCGTCGAGTATCGAAGTGGTAGGTGATGTGGTGAAAAATGGTCGTCGCGGATCATTAACCTGCAACCTTACCATTCATGGCGTTCAGGGGCATGTTGCCTACCCACATCTGGCTGACAATCCGGTACATCGCGCAGCACCTTTCCTTAATGAATTAGTGGCTATTGAGTGGGATCAGGGCAATGAATTCTTCCCGGCGACCAGTATGCAGATTGCCAATATTCAGGCGGGAACGGGCAGTAACAACGTTATTCCGGGTGAACTGTTTGTGCAGTTTAACTTCCGCTTCAGCACCGAACTGACTGATGAGATGATCAAAGCGCAGGTGCTTGCCCTGCTTGAAAAACATCAACTGCGCTATACGGTGGATTGGTGGCTTTCCGGGCAGCCATTTTTGACCGCGCGCGGTAAACTGGTGGATGCGGTCGTTAACGCGGTTGAGCACTATAATGAAATTAAACCGCAGCTACTGACCACAGGCGGAACGTCCGACGGGCGCTTTATTGCCCGCATGGGGGCGCAGGTGGTGGAACTCGGGCCGGTCAATGCCACTATTCATAAAATTAATGAATGTGTGAACGCTGCCGACCTGCAGCTACTTGCCCGTATGTATCAACGTATCATGGAACAGCTCGTCGCCTGA", + "dna_sequence_length": 1128, + "functions": [ + "N-succinyl-diaminopimelate deacylase" + ], + "id": "CDS_2453", + "location": [ + [ + "NC_000913", + 2591607, + "+", + 1128 + ] + ], + "md5": "a9f026747882031738b009dc603db4d0", + "parent_gene": "", + "protein_md5": "21197779d49f3d578c4b0baa72c7e2f9", + "protein_translation": "MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285068" + ], + [ + "gene_synonym", + "ECK2468" + ], + [ + "gene_synonym", + "EcoGene:EG14399" + ], + [ + "gene_synonym", + "GI:94541122" + ], + [ + "gene_synonym", + "GeneID:1450286" + ], + [ + "gene_synonym", + "JW2457" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EET2" + ], + [ + "gene_synonym", + "YP_588465.1" + ], + [ + "gene_synonym", + "b4547" + ], + [ + "gene_synonym", + "ypfN" + ] + ], + "dna_sequence": "ATGGACTGGCTGGCTAAATATTGGTGGATTCTGGTGATTGTCTTTTTGGTAGGCGTCCTGCTGAACGTGATTAAAGATCTCAAGCGCGTCGACCATAAGAAATTTCTCGCCAACAAGCCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAA", + "dna_sequence_length": 201, + "functions": [ + "putative membrane protein, UPF0370 family" + ], + "id": "CDS_2454", + "location": [ + [ + "NC_000913", + 2592762, + "+", + 201 + ] + ], + "md5": "8642f6fdd56f3416106007cf55ef4f68", + "parent_gene": "", + "protein_md5": "80a9dd33d587548bf4184d4111abf754", + "protein_translation": "MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPKKDQPKK", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008145" + ], + [ + "gene_synonym", + "ECK2469" + ], + [ + "gene_synonym", + "EcoGene:EG14195" + ], + [ + "gene_synonym", + "GI:90111441" + ], + [ + "gene_synonym", + "GeneID:947571" + ], + [ + "gene_synonym", + "JW5396" + ], + [ + "gene_synonym", + "NP_416968.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76561" + ], + [ + "gene_synonym", + "b2473" + ], + [ + "gene_synonym", + "ypfH" + ] + ], + "dna_sequence": "ATGAAACATGACCATTTTGTTGTTCAAAGCCCGGATAAACCTGCGCAACAGTTGTTACTGCTTTTCCACGGTGTCGGGGATAACCCGGTGGCAATGGGGGAAATAGGCAACTGGTTTGCACCGCTGTTTCCTGATGCGCTGGTGGTGAGTGTCGGTGGCGCGGAGCCGAGCGGTAATCCGGCGGGGCGTCAGTGGTTTTCGGTGCAGGGTATTACGGAAGATAATCGCCAGGCGCGTGTGGATGCGATCATGCCGACGTTTATTGAAACGGTGCGCTACTGGCAGAAACAGAGCGGAGTAGGGGCTAACGCCACGGCGCTCATCGGTTTCTCTCAAGGCGCGATTATGGTGCTGGAGAGCATTAAAGCCGAACCGGGCCTTGCTTCACGCGTCATTGCTTTTAACGGACGCTATGCGAGCCTGCCGGAAACTGCGTCTACAGCCACGACAATTCACCTGATTCATGGCGGTGAAGATCCGGTTATCGATCTGGCGCATGCGGTTGCGGCGCAGGAAGCGTTAATCAGTGCCGGTGGTGACGTGACGCTGGATATCGTGGAGGATTTAGGCCATGCGATCGACAATCGCAGTATGCAATTTGCCCTGGATCACTTGCGTTATACCATTCCGAAACATTATTTCGACGAAGCGCTAAGTGGCGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAA", + "dna_sequence_length": 699, + "functions": [ + "palmitoyl-CoA esterase activity, uncertain physiological substrate" + ], + "id": "CDS_2455", + "location": [ + [ + "NC_000913", + 2593770, + "-", + 699 + ] + ], + "md5": "c05bd41839f0a63c2c384439f127523e", + "parent_gene": "", + "protein_md5": "18f7f6b826d0c97fef4671b3e2fa2ea8", + "protein_translation": "MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008150" + ], + [ + "gene_synonym", + "ECK2470" + ], + [ + "gene_synonym", + "EcoGene:EG14196" + ], + [ + "gene_synonym", + "GI:16130399" + ], + [ + "gene_synonym", + "GeneID:946053" + ], + [ + "gene_synonym", + "JW2459" + ], + [ + "gene_synonym", + "NP_416969.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76562" + ], + [ + "gene_synonym", + "b2474" + ], + [ + "gene_synonym", + "tmcA" + ], + [ + "gene_synonym", + "ypfI" + ] + ], + "dna_sequence": "ATGGCTGAACTGACTGCGCTTCACACATTAACAGCGCAAATGAAACGTGAAGGGATCCGCCGCTTGCTGGTGTTGAGCGGGGAAGAGGGTTGGTGTTTTGAGCATACTCTTAAGTTGCGTGATGCCTTACCTGGCGACTGGCTGTGGATTTCGCCGCGGCCAGATGCTGAAAACCACTGTTCTCCCTCGGCACTACAAACTTTACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCGCCACGGCTTTGATGCCGCTGCCTTTGCCGCACTTAGCGGAACGTTGAAAGCGGGAAGCTGGCTGGTTTTGTTACTCCCTGTATGGGAAGAGTGGGAAAACCAACCTGATGCCGACTCGCTGCGCTGGAGTGATTGCCCTGACCCTATTGCGACGCCGCATTTTGTCCAGCATCTCAAACGCGTACTTACGGCGGATAACGAGGCTATCCTCTGGCGGCAAAACCAGCCATTCTCGTTGGCGCATTTTACTCCCCGTACTGACTGGTACCCCGCGACTGGCGCACCACAACCAGAACAACAGCAACTCTTAAAGCAGCTAATGACCATGCCGCCGGGCGTGGCAGCGGTAACGGCTGCGCGTGGGCGCGGTAAGTCGGCGTTGGCAGGGCAACTCATTTCTCGTATTGCGGGCAGAGCGATTGTCACCGCGCCCGCAAAAGCGTCAACGGATGTACTGGCACAATTTGCGGGCGAGAAGTTTCGCTTTATTGCGCCGGATGCCTTGTTAGCCAGCGATGAGCAAGCCGACTGGCTGGTGGTCGATGAAGCCGCAGCCATACCTGCGCCATTGTTGCATCAACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTTTTTGCTGAAATTTTGCGCTCGCTTTCCGCATTTACACCGTTTTGAACTGCAACAGCCGATCCGCTGGGCGCAGGGATGCCCGCTGGAAAAAATGGTCAGCGAGGCACTGGTTTTTGACGATGAAAACTTCACCCATACACCACAAGGCAATATTGTCATTTCCGCATTTGAACAGACGTTATGGCAAAGCGATCCAGAAACGCCGTTAAAGGTTTATCAGCTCTTGTCTGGTGCGCACTATCGGACTTCGCCGCTGGATTTACGCCGGATGATGGATGCACCAGGGCAACATTTTTTACAGGCGGCTGGCGAAAACGAGATTGCCGGGGCGCTGTGGCTGGTGGATGAGGGTGGATTATCTCAACAACTCAGTCAGGCGGTATGGGCAGGTTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGGCAACGCTGCGGTTTTGTGCTGGTGCGGATGGGTAATCATCGGGAAGCCAGCAGCGGTTGCTATACGGCGATGGCGCTGTTACCGATGAGTGATGCGGGTAAACAGCTGGCTGAACGTGAGCATTACCGTTTACGTCGCGATGCGCAAGCTCTCGCGCAGTGGAATGGCGAAACGCTTCCTGTTGATCCACTAAACGATGCCGTCCTTTCTGACGACGACTGGCTTGAACTGGCCGGTTTTGCTTTCGCTCATCGTCCGCTATTAACGTCGTTAGGTTGCTTATTGCGTCTGTTACAAACCAGTGAACTGGCATTACCGGCGCTGCGTGGGCGTTTACAGAAAAACGCCAGTGATGCGCAGTTATGTACCACACTTAAACTTTCAGGCCGCAAGATGTTACTGGTCCGTCAGCGGGAAGAGGCCGCGCAGGCGCTGTTCGCACTTAATGATGTTCGCACTGAGCGTCTGCGCGATCGCATAACGCAATGGCAATTATTTCACTGA", + "dna_sequence_length": 2016, + "functions": [ + "elongator methionine tRNA (ac4C34) acetyltransferase" + ], + "id": "CDS_2456", + "location": [ + [ + "NC_000913", + 2595859, + "-", + 2016 + ] + ], + "md5": "c1c8c80c92efdd001ca9b4686ab9b600", + "parent_gene": "", + "protein_md5": "3bd54cd62bd977d1439fce991e1a7036", + "protein_translation": "MAELTALHTLTAQMKREGIRRLLVLSGEEGWCFEHTLKLRDALPGDWLWISPRPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWLVLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNEAILWRQNQPFSLAHFTPRTDWYPATGAPQPEQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRIAGRAIVTAPAKASTDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWQSDPETPLKVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQDLDYLSVSFGYTGELWRFWQRCGFVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVDPLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQLCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQLFH", + "protein_translation_length": 671, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008153" + ], + [ + "gene_synonym", + "ECK2471" + ], + [ + "gene_synonym", + "EcoGene:EG14197" + ], + [ + "gene_synonym", + "GI:16130400" + ], + [ + "gene_synonym", + "GeneID:946956" + ], + [ + "gene_synonym", + "JW2460" + ], + [ + "gene_synonym", + "NP_416970.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64429" + ], + [ + "gene_synonym", + "b2475" + ], + [ + "gene_synonym", + "ypfJ" + ] + ], + "dna_sequence": "ATGCGTTGGCAAGGGCGACGTGAAAGTGACAATGTTGAAGACAGGCGCAACAGCTCTGGTGGTCCATCTATGGGCGGTCCCGGTTTTCGCCTGCCAAGCGGTAAAGGCGGGCTGATTTTACTGATAGTCGTGCTGGTTGCAGGCTACTATGGTGTTGATTTAACCGGGTTGATGACCGGGCAGCCGGTTTCCCAACAACAATCAACGCGGTCAATTAGCCCAAATGAAGACGAAGCCGCAAAATTCACCTCGGTGATTCTGGCAACCACGGAAGACACCTGGGGACAACAGTTCGAGAAGATGGGTAAGACCTATCAGCAACCGAAGCTGGTCATGTACCGTGGAATGACGCGTACCGGCTGCGGGGCGGGCCAGTCCATAATGGGGCCGTTCTATTGCCCGGCGGATGGCACGGTTTATATCGATCTCTCCTTCTATGATGACATGAAAGACAAACTTGGCGCGGATGGCGATTTTGCCCAGGGGTACGTTATCGCCCATGAAGTCGGTCATCATGTGCAGAAACTGTTAGGCATCGAGCCGAAAGTTCGTCAACTGCAACAAAACGCGACGCAGGCGGAAGTAAACCGCTTATCTGTGCGTATGGAACTCCAGGCCGACTGTTTTGCCGGTGTCTGGGGGCATAGTATGCAGCAGCAAGGCGTTCTGGAAACCGGCGATCTGGAAGAGGCGCTGAACGCGGCGCAGGCCATCGGCGATGACCGTTTACAACAGCAAAGTCAGGGGCGAGTAGTACCAGACAGTTTCACTCATGGCACTTCTCAGCAACGCTACAGCTGGTTTAAACGTGGTTTCGACAGCGGCGATCCGGCACAATGCAATACTTTTGGTAAAAGCATTTAA", + "dna_sequence_length": 864, + "functions": [ + "putative neutral zinc metallopeptidase" + ], + "id": "CDS_2457", + "location": [ + [ + "NC_000913", + 2596737, + "-", + 864 + ] + ], + "md5": "6afe8286c32d38e0b472887d6659018d", + "parent_gene": "", + "protein_md5": "79de25710027b9941b278a537a881745", + "protein_translation": "MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008156" + ], + [ + "gene_synonym", + "ECK2472" + ], + [ + "gene_synonym", + "EcoGene:EG10791" + ], + [ + "gene_synonym", + "GI:16130401" + ], + [ + "gene_synonym", + "GeneID:946957" + ], + [ + "gene_synonym", + "JW2461" + ], + [ + "gene_synonym", + "NP_416971.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7D7" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "b2476" + ], + [ + "gene_synonym", + "purC" + ] + ], + "dna_sequence": "ATGCAAAAGCAAGCTGAGTTGTATCGTGGTAAAGCGAAAACCGTATACAGCACGGAAAACCCGGACCTGTTGGTGCTCGAATTCCGCAATGATACGTCAGCAGGGGATGGCGCGCGCATTGAGCAGTTTGATCGCAAAGGTATGGTGAACAACAAGTTCAACTACTTCATTATGAGCAAACTGGCTGAAGCGGGTATCCCGACTCAAATGGAGCGTCTGCTCTCCGATACCGAATGTCTGGTGAAAAAGCTGGATATGGTGCCGGTTGAGTGTGTCGTGCGTAACCGTGCTGCTGGCTCTCTGGTGAAACGTCTTGGAATCGAAGAAGGTATTGAGCTGAACCCGCCGCTGTTCGATCTGTTCCTGAAAAACGACGCCATGCACGATCCGATGGTCAACGAATCTTACTGCGAAACCTTTGGCTGGGTGAGCAAAGAGAACCTGGCGCGTATGAAAGAGCTGACCTACAAAGCGAACGACGTGCTGAAAAAACTGTTCGATGATGCTGGTCTGATTCTGGTCGACTTCAAGCTGGAATTTGGTCTGTACAAAGGCGAAGTGGTACTGGGTGATGAGTTCTCCCCGGACGGTAGCCGCCTGTGGGACAAAGAAACGCTGGAGAAAATGGACAAAGACCGTTTCCGCCAGAGCCTCGGTGGCCTGATCGAAGCCTATGAAGCCGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGA", + "dna_sequence_length": 714, + "functions": [ + "phosphoribosylaminoimidazole-succinocarboxamide synthetase" + ], + "id": "CDS_2458", + "location": [ + [ + "NC_000913", + 2597618, + "-", + 714 + ] + ], + "md5": "95a9ddc09a24979784021e2853dabb25", + "parent_gene": "", + "protein_md5": "b3550340b861a18dbbd2e853824eb6ea", + "protein_translation": "MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008161" + ], + [ + "gene_synonym", + "ECK2473" + ], + [ + "gene_synonym", + "EcoGene:EG10658" + ], + [ + "gene_synonym", + "GI:90111442" + ], + [ + "gene_synonym", + "GeneID:946954" + ], + [ + "gene_synonym", + "JW2462" + ], + [ + "gene_synonym", + "NP_416972.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A903" + ], + [ + "gene_synonym", + "b2477" + ], + [ + "gene_synonym", + "bamC" + ], + [ + "gene_synonym", + "dapX" + ], + [ + "gene_synonym", + "nlpB" + ] + ], + "dna_sequence": "ATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCCTACCTGGAAGCGGCACCGCTTGCGGAGCTTCATGCCCCGGCTGGAATGATTTTGCCGGTGACCTCCGGTGATTATGCAATCCCGGTGACCAACGGTAGTGGTGCTGTCGGTAAGGCGCTGGACATTCGTCCACCAGCCCAGCCGCTGGCACTGGTTTCTGGCGCGCGTACCCAGTTCACGGGCGATACCGCTTCATTGCTGGTGGAAAATGGTCGTGGCAATACTCTGTGGCCGCAGGTGGTTAGCGTGCTGCAGGCGAAAAACTACACCATCACCCAACGTGATGATGCTGGTCAGACACTGACCACCGATTGGGTACAATGGAACCGTCTGGACGAAGACGAGCAGTATCGTGGTCGTTATCAAATCTCTGTTAAGCCGCAGGGTTATCAGCAGGCGGTTACGGTTAAACTGCTGAACCTGGAACAGGCGGGCAAACCGGTTGCAGACGCGGCTTCCATGCAGCGTTACAGCACGGAGATGATGAACGTTATTTCCGCCGGTCTGGATAAATCTGCCACTGACGCCGCGAACGCTGCGCAAAATCGTGCCTCCACCACTATGGACGTACAAAGTGCAGCTGATGACACCGGTTTACCAATGCTGGTCGTACGCGGGCCGTTCAATGTGGTTTGGCAACGTCTGCCAGCGGCGCTGGAAAAAGTGGGCATGAAAGTGACCGACAGCACCCGTTCGCAGGGCAACATGGCCGTAACTTATAAGCCGCTGTCTGACAGCGACTGGCAGGAACTGGGCGCGAGCGATCCAGGCCTGGCATCCGGTGACTATAAACTGCAGGTTGGCGATTTAGATAACCGCAGCAGCCTACAGTTCATCGATCCGAAAGGTCATACTCTGACTCAGAGTCAGAACGACGCGCTGGTAGCTGTCTTCCAGGCTGCGTTTAGCAAGTAA", + "dna_sequence_length": 1035, + "functions": [ + "BamABCDE complex OM biogenesis lipoprotein" + ], + "id": "CDS_2459", + "location": [ + [ + "NC_000913", + 2598865, + "-", + 1035 + ] + ], + "md5": "fb59fa3eb62acbb78a62e45da411770e", + "parent_gene": "", + "protein_md5": "8d841e0474b30257f6ea30847a91b30a", + "protein_translation": "MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008163" + ], + [ + "gene_synonym", + "ECK2474" + ], + [ + "gene_synonym", + "EcoGene:EG10205" + ], + [ + "gene_synonym", + "GI:16130403" + ], + [ + "gene_synonym", + "GeneID:946952" + ], + [ + "gene_synonym", + "JW2463" + ], + [ + "gene_synonym", + "NP_416973.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6L2" + ], + [ + "gene_synonym", + "b2478" + ], + [ + "gene_synonym", + "dapA" + ] + ], + "dna_sequence": "ATGTTCACGGGAAGTATTGTCGCGATTGTTACTCCGATGGATGAAAAAGGTAATGTCTGTCGGGCTAGCTTGAAAAAACTGATTGATTATCATGTCGCCAGCGGTACTTCGGCGATCGTTTCTGTTGGCACCACTGGCGAGTCCGCTACCTTAAATCATGACGAACATGCTGATGTGGTGATGATGACGCTGGATCTGGCTGATGGGCGCATTCCGGTAATTGCCGGGACCGGCGCTAACGCTACTGCGGAAGCCATTAGCCTGACGCAGCGCTTCAATGACAGTGGTATCGTCGGCTGCCTGACGGTAACCCCTTACTACAATCGTCCGTCGCAAGAAGGTTTGTATCAGCATTTCAAAGCCATCGCTGAGCATACTGACCTGCCGCAAATTCTGTATAATGTGCCGTCCCGTACTGGCTGCGATCTGCTCCCGGAAACGGTGGGCCGTCTGGCGAAAGTAAAAAATATTATCGGAATCAAAGAGGCAACAGGGAACTTAACGCGTGTAAACCAGATCAAAGAGCTGGTTTCAGATGATTTTGTTCTGCTGAGCGGCGATGATGCGAGCGCGCTGGACTTCATGCAATTGGGCGGTCATGGGGTTATTTCCGTTACGGCTAACGTCGCAGCGCGTGATATGGCCCAGATGTGCAAACTGGCAGCAGAAGGGCATTTTGCCGAGGCACGCGTTATTAATCAGCGTCTGATGCCATTACACAACAAACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAA", + "dna_sequence_length": 879, + "functions": [ + "dihydrodipicolinate synthase" + ], + "id": "CDS_2460", + "location": [ + [ + "NC_000913", + 2599760, + "-", + 879 + ] + ], + "md5": "2da26ffa335d9eb4492c1a47a0e0db23", + "parent_gene": "", + "protein_md5": "82bf9d8da90be8f700df586b4387bc0e", + "protein_translation": "MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008168" + ], + [ + "gene_synonym", + "ECK2475" + ], + [ + "gene_synonym", + "EcoGene:EG11149" + ], + [ + "gene_synonym", + "GI:90111443" + ], + [ + "gene_synonym", + "GeneID:946950" + ], + [ + "gene_synonym", + "JW2464" + ], + [ + "gene_synonym", + "NP_416974.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I3" + ], + [ + "gene_synonym", + "b2479" + ], + [ + "gene_synonym", + "gcvR" + ], + [ + "gene_synonym", + "yffD" + ] + ], + "dna_sequence": "TTGACACTGTCATCGCAACATTATCTGGTGATCACTGCGTTGGGTGCCGATCGCCCTGGAATTGTGAACACCATCACCCGTCATGTCAGTAGTTGCGGCTGTAATATTGAAGACAGTCGCCTGGCGATGCTGGGAGAAGAGTTCACGTTTATTATGCTGCTTTCCGGTTCATGGAATGCCATTACTCTGATTGAATCAACGTTACCGTTGAAAGGTGCCGAACTGGATCTTTTAATCGTGATGAAGCGCACGACGGCGCGTCCGCGTCCGCCAATGCCAGCATCTGTCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGCAAGCGTTCAAAGCCCTATGTACAGAACTCAATGCACAAGGCAGTATTAACGTCGTCAATTATTCCCAACATGATGAACAGGATGGAGTTAAGTAA", + "dna_sequence_length": 573, + "functions": [ + "transcriptional repressor, regulatory protein accessory to GcvA" + ], + "id": "CDS_2461", + "location": [ + [ + "NC_000913", + 2599906, + "+", + 573 + ] + ], + "md5": "c2141b9984ff72394941ca3db6a6ab9d", + "parent_gene": "", + "protein_md5": "8f4568e7bff9d7f98a188c458f65e195", + "protein_translation": "MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNYSQHDEQDGVK", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008171" + ], + [ + "gene_synonym", + "ECK2476" + ], + [ + "gene_synonym", + "EcoGene:EG10108" + ], + [ + "gene_synonym", + "GI:16130405" + ], + [ + "gene_synonym", + "GeneID:946949" + ], + [ + "gene_synonym", + "JW2465" + ], + [ + "gene_synonym", + "NP_416975.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE52" + ], + [ + "gene_synonym", + "b2480" + ], + [ + "gene_synonym", + "bcp" + ] + ], + "dna_sequence": "ATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGAAAAAGAGCTGCTTAACTTTACGCTCCTGTCTGATGAGGACCACCAGGTGTGCGAACAATTCGGCGTCTGGGGTGAAAAGTCCTTCATGGGCAAAACCTACGATGGCATTCATCGCATCAGCTTCCTGATTGACGCTGATGGCAAAATCGAACATGTCTTTGACGATTTCAAAACCAGCAATCACCACGACGTTGTGCTGAACTGGCTGAAAGAACACGCCTGA", + "dna_sequence_length": 471, + "functions": [ + "peroxiredoxin", + "thiol peroxidase, thioredoxin-dependent" + ], + "id": "CDS_2462", + "location": [ + [ + "NC_000913", + 2600478, + "+", + 471 + ] + ], + "md5": "10299594ea757d2e178dff8dd5382a1e", + "parent_gene": "", + "protein_md5": "d0a863af2c08e2bba635085fb5147e18", + "protein_translation": "MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008179" + ], + [ + "gene_synonym", + "ECK2477" + ], + [ + "gene_synonym", + "EcoGene:EG11150" + ], + [ + "gene_synonym", + "GI:90111444" + ], + [ + "gene_synonym", + "GeneID:946959" + ], + [ + "gene_synonym", + "JW2466" + ], + [ + "gene_synonym", + "NP_416976.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23481" + ], + [ + "gene_synonym", + "b2481" + ], + [ + "gene_synonym", + "hyfA" + ], + [ + "gene_synonym", + "yffE" + ] + ], + "dna_sequence": "ATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGAAGCCCCTTGCCTGCAGGTCTGCCCGGTCAATGCCATCTCTCAGAGGGATGATGCGATCCAACTCAACGAAAGCCTCTGTATTGGCTGCAAGCTTTGCGCCGTGGTCTGCCCATTTGGCGCAATCAGCGCTTCAGGAAGCCGTCCGGTGAATGCCCATGCGCAATATGTTTTTCAGGCTGAAGGCTCACTCAAAGACGGCGAAGAAAACGCGCCAACACAACATGCTTTGCTGCGCTGGGAACCTGGTGTCCAGACCGTCGCGGTGAAATGCGACCTGTGTGATTTCTTGCCAGAAGGTCCGGCCTGCGTTCGCGCTTGCCCGAATCAGGCGTTACGGCTGATCACCGGTGATAGCCTGCAACGTCAGATGAAAGAAAAACAGCGCCTTGCCGCAAGCTGGTTTGCCAATGGCGGGGAGGATCCCCTTTCCCTCACTCAGGAGCAACGCTAA", + "dna_sequence_length": 618, + "functions": [ + "hydrogenase 4, 4Fe-4S subunit" + ], + "id": "CDS_2463", + "location": [ + [ + "NC_000913", + 2601201, + "+", + 618 + ] + ], + "md5": "d64957812e010d4824ac534d72692ec1", + "parent_gene": "", + "protein_md5": "8c2e647e869249f3c4eac461ce093f51", + "protein_translation": "MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTSTITAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVFQAEGSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITGDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQR", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008181" + ], + [ + "gene_synonym", + "ECK2478" + ], + [ + "gene_synonym", + "EcoGene:EG11282" + ], + [ + "gene_synonym", + "GI:16130407" + ], + [ + "gene_synonym", + "GeneID:946961" + ], + [ + "gene_synonym", + "JW2467" + ], + [ + "gene_synonym", + "NP_416977.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23482" + ], + [ + "gene_synonym", + "b2482" + ], + [ + "gene_synonym", + "hyfB" + ], + [ + "gene_synonym", + "yffF" + ] + ], + "dna_sequence": "ATGGATGCCCTGCAATTATTAACCTGGTCGCTGATTCTCTATCTGTTTGCTAGTCTGGCTTCGCTGTTTTTACTCGGTCTGGACAGACTGGCTATTAAGCTTTCCGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACAACGCTTTTTGGTTCATCGTGCTGTTTGAAATGATGTCGCTGTCTTCCTGGTTTCTGGTCATTGCCAGGCAGGATAAAACGTCGATCAACGCTGGCATGCTCTACTTTTTTATCGCCCACGCCGGATCGGTGCTGATAATGATCGCCTTCTTGCTGATGGGGCGCGAAAGCGGCAGCCTCGATTTTGCCAGTTTCCGCACGCTTTCACTTTCTCCGGGGCTGGCGTCGGCGGTGTTCCTGCTGGCCTTTTTCGGTTTTGGCGCGAAAGCCGGGATGATGCCGTTGCACAGCTGGTTGCCGCGCGCTCACCCTGCCGCACCATCGCACGCTTCGGCGTTGATGTCTGGCGTAATGGTCAAAATAGGTATTTTCGGCATCCTGAAAGTAGCGATGGATCTGCTGGCGCAAACGGGTTTGCCTCTGTGGTGGGGCATTCTGGTGATGGCGATCGGCGCAATCTCCGCGCTCCTGGGCGTGCTATATGCGCTGGCGGAACAGGATATCAAACGGCTGCTGGCCTGGAGTACCGTCGAAAACGTCGGCATTATTTTGCTGGCAGTCGGTGTGGCGATGGTCGGTCTGTCACTGCACGACCCGCTGCTCACCGTGGTTGGACTGCTCGGCGCACTGTTTCATCTGCTCAACCATGCGCTGTTCAAAGGGCTGCTATTTCTCGGCGCGGGAGCGATTATTTCGCGTTTGCATACCCACGACATGGAAAAAATGGGGGCACTAGCGAAACGGATGCCGTGGACAGCCGCAGCATGCCTGATTGGTTGCCTCGCGATATCAGCCATTCCTCCGCTGAATGGTTTTATCAGCGAATGGTACACCTGGCAGTCGCTGTTCTCACTAAGTCGTGTGGAAGCCGTAGCGCTACAACTTGCGGGTCCTATTGCTATGGTAATGCTGGCAGTCACTGGTGGGCTGGCAGTAATGTGCTTCGTAAAAATGTACGGTATTACTTTCTGTGGTGCGCCGCGCAGTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTTGGCTGGCACCGAAGATAATGCATATTGCCCATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTCGCGCCGCGCAGCGTTTCGTCGCACAGGAGATGCCTGGGCATGCGGCTACGGCTGGGAAAATGCGATGGCCCCGTCAGGCAATGGCGTGATGCAGCCGCTGCGTGTGGTCTTTTCTGCGCTATTTCGTCTACGACAACAGCTCGACCCTACGCTGAGGCTAAATAAAGGTCTTGCGCACGTCACCGCCAGGGCTCAGAGCACAGAACCCTTCTGGGATGAGCGGGTGATCCGCCCCATCGTGAGCGCCACCCAACGGCTGGCCAAAGAAATACAGCATCTGCAAAGCGGCGACTTTCGTCTCTATTGCCTGTATGTGGTCGCCGCACTGGTTGTGCTGCTAATCGCTATTGCCGTCTAA", + "dna_sequence_length": 2019, + "functions": [ + "hydrogenase 4, membrane subunit" + ], + "id": "CDS_2464", + "location": [ + [ + "NC_000913", + 2601818, + "+", + 2019 + ] + ], + "md5": "257939f1392e960700fd440bd51d07b3", + "parent_gene": "", + "protein_md5": "1c593f34546633d48b8d40c359272f83", + "protein_translation": "MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV", + "protein_translation_length": 672, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008183" + ], + [ + "gene_synonym", + "ECK2479" + ], + [ + "gene_synonym", + "EcoGene:EG14211" + ], + [ + "gene_synonym", + "GI:90111445" + ], + [ + "gene_synonym", + "GeneID:947492" + ], + [ + "gene_synonym", + "JW2468" + ], + [ + "gene_synonym", + "NP_416978.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77858" + ], + [ + "gene_synonym", + "b2483" + ], + [ + "gene_synonym", + "hyfC" + ] + ], + "dna_sequence": "ATGAGACAAACTCTTTGCGACGGATATCTGGTCATTTTTGCGTTAGCACAGGCCGTGATTCTGCTGATGCTAACCCCACTTTTTACGGGTATTTCCCGGCAGATACGCGCGCGTATGCACTCCCGCCGCGGGCCGGGGATCTGGCAGGATTATCGCGATATCCACAAACTGTTTAAACGCCAGGAAGTTGCGCCGACATCTTCAGGTCTGATGTTCCGCCTGATGCCGTGGGTATTAATCAGCAGCATGCTGGTGCTGGCGATGGCCTTACCACTGTTTATTACCGTTTCCCCTTTTGCGGGCGGCGGCGATCTGATCACCCTTATCTATCTTCTTGCCCTGTTTCGTTTTTTCTTTGCTCTTTCCGGGCTGGATACCGGAAGTCCGTTTGCGGGAGTCGGTGCCAGTCGCGAGTTGACGCTCGGCATTCTGGTCGAACCAATGCTTATTCTCTCACTGCTGGTATTGGCGCTGATAGCAGGTTCCACGCATATCGAGATGATCAGCAATACGCTGGCGATGGGCTGGAACTCGCCGCTAACCACCGTACTGGCGTTACTGGCCTGTGGTTTTGCCTGCTTCATTGAGATGGGAAAAATTCCCTTTGATGTTGCTGAAGCAGAACAGGAATTACAGGAAGGCCCGCTGACCGAATATTCCGGTGCCGGGCTGGCGCTAGCGAAATGGGGGCTGGGGCTGAAACAGGTCGTGATGGCATCACTGTTTGTGGCCCTGTTTCTGCCCTTTGGGCGCGCGCAAGAACTTTCTCTCGCCTGCCTGCTGACTTCACTTGTCGTTACGCTGCTCAAGGTTTTGCTGATTTTTGTACTGGCCTCAATCGCAGAAAACACGCTGGCACGCGGGCGTTTTTTACTCATTCACCATGTGACCTGGCTTGGCTTCAGCCTTGCTGCGCTTGCATGGGTCTTCTGGTTAACCGGTCTGTAA", + "dna_sequence_length": 948, + "functions": [ + "hydrogenase 4, membrane subunit" + ], + "id": "CDS_2465", + "location": [ + [ + "NC_000913", + 2603847, + "+", + 948 + ] + ], + "md5": "9aabde4c1f3b23b373c7aa5dfd920004", + "parent_gene": "", + "protein_md5": "610946c1e49db3658be5403446824b1e", + "protein_translation": "MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008185" + ], + [ + "gene_synonym", + "ECK2480" + ], + [ + "gene_synonym", + "EcoGene:EG14212" + ], + [ + "gene_synonym", + "GI:16130409" + ], + [ + "gene_synonym", + "GeneID:947290" + ], + [ + "gene_synonym", + "JW2469" + ], + [ + "gene_synonym", + "NP_416979.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77416" + ], + [ + "gene_synonym", + "b2484" + ], + [ + "gene_synonym", + "hyfD" + ] + ], + "dna_sequence": "ATGGAAAATCTTGCTCTGACGACGTTATTGCTGCCTTTTATCGGCGCACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGAACACCCGCATAACGGCACGAATCGTTATTACGCATTTTTACTGGTGTTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCGATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTGGCGGCGTTGGCATGGTCATGGCACTGGTCACCATTCTTTATGGCTTTCTGATGTATTTGCCACAGCAGGATATGAAGCGGTTGCTAGCCTGGTCGACCATCACTCAACTTGGCTGGATGTTCTTCGGCTTGTCGCTCTCCATCTTCGGCTCGCGGCTGGCGCTGGAGGGCAGCATCGCCTACATCGTCAACCACGCGTTCGCTAAAAGCCTGTTTTTCCTTGTAGCAGGTGCGCTGAGTTACAGCTGCGGCACGCGCTTGTTGCCGCGTCTGCGTGGCGTATTGCACACCCTGCCGTTGCCAGGCGTGGGTTTCTGCGTGGCAGCGCTGGCGATTACCGGCGTGCCGCCGTTCAACGGCTTCTTCAGTAAATTCCCGCTGTTTGCTGCCGGTTTTGCGTTGTCAGTGGAGTACTGGATCCTGCTGCCCGCCATGATTCTTCTGATGATTGAATCGGTCGCCAGTTTCGCCTGGTTTATTCGCTGGTTTGGTCGCGTTGTGCCTGGCAAACCGAGCGAGGCCGTCGCCGATGCCGCACCGCTGCCAGGATCAATGCGCCTGGTGTTGATTGTACTGATTGTGATGTCGCTGATTTCCAGCGTAATCGCCGCGACCTGGTTGCAGTAA", + "dna_sequence_length": 1440, + "functions": [ + "hydrogenase 4, membrane subunit" + ], + "id": "CDS_2466", + "location": [ + [ + "NC_000913", + 2604811, + "+", + 1440 + ] + ], + "md5": "17ff27a502ccffc81793b07f944fef47", + "parent_gene": "", + "protein_md5": "df81a014454c091da38351363d0500c4", + "protein_translation": "MENLALTTLLLPFIGALVVSFSPQRRAAEWGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGTFALSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWLQ", + "protein_translation_length": 479, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008188" + ], + [ + "gene_synonym", + "ECK2481" + ], + [ + "gene_synonym", + "EcoGene:EG14213" + ], + [ + "gene_synonym", + "GI:16130410" + ], + [ + "gene_synonym", + "GeneID:945298" + ], + [ + "gene_synonym", + "JW2470" + ], + [ + "gene_synonym", + "NP_416980.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEW1" + ], + [ + "gene_synonym", + "b2485" + ], + [ + "gene_synonym", + "hyfE" + ] + ], + "dna_sequence": "ATGACCGGTTCTATGATCGTAAATAATCTGGCGGGACTGATGATGCTGACATCGCTGTTTGTGATTAGCGTCAAAAGCTATCGCCTGTCATGCGGATTTTACGCCTGCCAGTCACTGGTGCTGGTGTCTATTTTCGCCACTCTCTCGTGCCTGTTCGCCGCAGAGCAACTGCTGATCTGGTCCGCCAGCGCCTTTATCACCAAAGTGCTGCTGGTACCGTTAATCATGACTTACGCTGCACGAAATATTCCCCAGAACATCCCGGAAAAAGCGTTATTCGGTCCGGCAATGATGGCACTGCTCGCGGCGTTAATTGTCCTGCTTTGCGCATTTGTCGTTCAGCCCGTGAAGCTACCGATGGCTACCGGGCTGAAACCGGCGCTGGCGGTAGCGTTAGGTCATTTTCTGCTTGGCCTGCTGTGCATTGTCAGCCAGCGCAATATCCTGCGGCAAATTTTTGGTTACTGCCTGATGGAAAACGGCTCCCATCTGGTGCTGGCGCTTCTTGCCTGGCGAGCACCGGAACTGGTGGAAATAGGTATCGCTACCGACGCCATCTTCGCCGTCATTGTGATGGTGTTACTGGCAAGAAAAATATGGCGTACCCACGGCACGCTGGACGTGAACAACTTGACCGCGCTGAAGGGATAA", + "dna_sequence_length": 651, + "functions": [ + "hydrogenase 4, membrane subunit" + ], + "id": "CDS_2467", + "location": [ + [ + "NC_000913", + 2606262, + "+", + 651 + ] + ], + "md5": "4da0d26e20342a23e7b67990730ce5e5", + "parent_gene": "", + "protein_md5": "e465515bd56e7c2862b9ad8e0ac8d7eb", + "protein_translation": "MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008191" + ], + [ + "gene_synonym", + "ECK2482" + ], + [ + "gene_synonym", + "EcoGene:EG14214" + ], + [ + "gene_synonym", + "GI:16130411" + ], + [ + "gene_synonym", + "GeneID:946962" + ], + [ + "gene_synonym", + "JW2471" + ], + [ + "gene_synonym", + "NP_416981.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77437" + ], + [ + "gene_synonym", + "b2486" + ], + [ + "gene_synonym", + "hyfF" + ] + ], + "dna_sequence": "ATGAGTTATTCTGTGATGTTCGCTTTACTCCTGCTCACGCCGCTGCTTTTTTCGCTGCTCTGTTTTGCCTGCCGGAAACGGAGACTTTCTGCGACTCGCACGGTGACCGTATTACATAGCTTAGGGATCACACTGCTGCTGATTCTGGCACTCTGGGTGGTCCAAACTGCCGCTGATGCAGGAGAAATATTCGCTGCGGGACTGTGGCTTCATATTGATGGTCTGGGCGGTTTGTTCCTCGCCATTCTTGGTGTGATTGGCTTTCTCACCGGTATTTACTCGATTGGCTACATGCGTCATGAAGTGGCACACGGCGAGCTTTCACCCGTTACGCTGTGCGATTACTACGGTTTCTTCCATCTGTTTTTGTTCACCATGCTGCTGGTTGTTACCAGCAATAACCTGATTGTGATGTGGGCGGCGATCGAAGCCACCACCTTAAGCTCGGCGTTTCTGGTAGGCATTTACGGTCAGCGTTCATCGCTGGAAGCTGCATGGAAGTACATCATTATTTGTACTGTTGGTGTCGCTTTTGGTCTGTTCGGTACCGTGCTGGTATACGCCAACGCCGCCAGCGTTATGCCGCAGGCAGAAATGGCGATATTCTGGAGCGAGGTTCTTAAGCAATCGTCCTTGCTTGACCCAACATTAATGCTGTTGGCCTTTGTGTTTTTGCTAATTGGCTTTGGTACCAAAACCGGGCTATTTCCCATGCACGCCTGGCTGCCGGATGCTCACAGTGAAGCGCCGAGTCCGGTCAGCGCCCTGCTCTCCGCCGTATTGCTGAACTGCGCGCTGTTGGTGCTGATTCGCTATTACATCATTATTTGCCAAGCCATCGGCAGCGATTTCCCCAACCGGTTGTTGCTCATCTTCGGCATGTTGTCGGTTGCCGTGGCGGCATTTTTCATTCTGGTACAGCGGGACATTAAGCGTCTGCTGGCGTACTCCAGCGTGGAGAACATGGGGCTGGTCGCGGTGGAGCTAGGCATTGGCGGGCCGCTGGGAATTTTTGCCGCGCTGCTGCACATCTTAAACCACAGTCTGGCAAAAACGCTGCTGTTCTGCGGTTCCGGCAATGTACTGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGAATTTATGACCATTACCGCCGGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGCGGGCCTGGTACGGATGGCTGCGCGGGTGTTAATGGCGAAACCGCCGCAGGCCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGATGCTGGCGATGGGAACGCATATTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGCATCTGTTTCGGAGAAACACAGTGAACGTTAA", + "dna_sequence_length": 1581, + "functions": [ + "hydrogenase 4, membrane subunit" + ], + "id": "CDS_2468", + "location": [ + [ + "NC_000913", + 2606917, + "+", + 1581 + ] + ], + "md5": "1a7b4f24225ddf4287c2ef763ab1d061", + "parent_gene": "", + "protein_md5": "102dcc6be16fab14349a02bb69d894b8", + "protein_translation": "MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER", + "protein_translation_length": 526, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008194" + ], + [ + "gene_synonym", + "ECK2483" + ], + [ + "gene_synonym", + "EcoGene:EG14215" + ], + [ + "gene_synonym", + "GI:16130412" + ], + [ + "gene_synonym", + "GeneID:946964" + ], + [ + "gene_synonym", + "JW2472" + ], + [ + "gene_synonym", + "NP_416982.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77329" + ], + [ + "gene_synonym", + "b2487" + ], + [ + "gene_synonym", + "hyfG" + ] + ], + "dna_sequence": "GTGAACGTTAATTCATCGTCAAATCGTGGCGAAGCGATTCTCGCCGCCCTGAAAACGCAGTTCCCCGGCGCGGTGCTGGATGAAGAGCGACAAACGCCTGAACAGGTCACCATTACGGTGAAAATCAATCTGCTGCCTGACGTTGTACAGTATCTTTATTATCAACATGATGGCTGGCTTCCGGTCCTGTTTGGCAACGACGAGCGGACACTTAACGGTCATTACGCGGTTTATTATGCCCTTTCAATGGAAGGGGCCGAAAAATGCTGGATTGTGGTGAAGGCGCTGGTCGATGCCGACAGTCGGGAGTTTCCGTCAGTCACACCGCGCGTCCCTGCCGCGGTCTGGGGCGAGCGAGAAATTCGCGATATGTACGGGCTGATTCCGGTTGGCCTGCCGGATCAGCGTCGCCTGGTGTTGCCCGATGACTGGCCGGAAGATATGCATCCGCTGCGCAAAGATGCGATGGATTATCGACTGCGCCCTGAACCGACGACTGATTCCGAAACGTATCCGTTTATCAATGAGGGCAACAGCGATGCGCGGGTGATCCCTGTCGGCCCGCTGCATATCACCTCCGATGAACCGGGTCACTTCCGCTTGTTTGTGGATGGCGAGCAAATTGTCGATGCTGATTACCGCCTGTTTTATGTCCATCGCGGCATGGAGAAACTGGCAGAAACGCGGATGGGCTACAACGAAGTGACCTTCTTATCGGACCGCGTGTGTGGGATTTGCGGTTTTGCCCACAGTGTGGCCTATACCAATTCGGTTGAAAATGCACTGGGGATTGAGGTGCCGCAACGAGCACATACTATTCGCTCGATTCTGCTGGAAGTCGAACGGCTACACAGTCATTTGCTTAACCTTGGCCTCTCCTGCCATTTCGTTGGTTTTGATACCGGCTTTATGCAATTTTTCCGCGTGCGGGAAAAGTCGATGACGATGGCGGAATTGCTGATCGGGTCGCGTAAAACCTACGGTCTGAATCTGATTGGTGGTGTTCGCCGCGATATTCTCAAAGAGCAACGTCTGCAAACGCTGAAACTGGTGCGCGAGATGCGCGCCGACGTGTCGGAGCTGGTAGAGATGCTGCTTGCTACGCCGAATATGGAACAACGCACTCAGGGCATTGGCATTCTCGACCGACAAATCGCCCGTGATTTGCGCTTTGATCACCCCTACGCCGACTACGGCAATATTCCAAAAACACTGTTTACCTTTACCGGCGGCGATGTTTTCTCCCGCGTGATGGTCCGTGTCAAAGAGACGTTTGATTCGCTGGCAATGCTGGAATTTGCCCTCGACAACATGCCGGATACCCCACTGCTGACCGAAGGCTTTAGCTATAAACCTCACGCATTCGCGCTGGGCTTTGTTGAAGCGCCACGCGGTGAAGACGTGCACTGGAGCATGCTCGGTGATAACCAAAAATTGTTCCGCTGGCGCTGCCGTGCCGCCACCTACGCCAACTGGCCGGTGTTGCGTTACATGCTGCGCGGCAATACCGTTTCTGACGCACCGCTGATTATCGGTAGCCTTGATCCCTGCTACTCCTGTACCGACCGTGTGACGCTGGTAGATGTGCGCAAGCGCCAGTCAAAAACCGTGCCGTATAAAGAGATCGAACGCTACGGCATTGATCGTAACCGTTCGCCGCTGAAGTAA", + "dna_sequence_length": 1668, + "functions": [ + "hydrogenase 4, subunit" + ], + "id": "CDS_2469", + "location": [ + [ + "NC_000913", + 2608487, + "+", + 1668 + ] + ], + "md5": "4106085a90f0a7078c19ea941b384bad", + "parent_gene": "", + "protein_md5": "12df15a8d2c83c5a7ead213a8dda3362", + "protein_translation": "MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYPFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRNRSPLK", + "protein_translation_length": 555, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008196" + ], + [ + "gene_synonym", + "ECK2484" + ], + [ + "gene_synonym", + "EcoGene:EG14216" + ], + [ + "gene_synonym", + "GI:16130413" + ], + [ + "gene_synonym", + "GeneID:946965" + ], + [ + "gene_synonym", + "JW2473" + ], + [ + "gene_synonym", + "NP_416983.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77423" + ], + [ + "gene_synonym", + "b2488" + ], + [ + "gene_synonym", + "hyfH" + ] + ], + "dna_sequence": "ATGCTGAAGTTACTGAAAACTATTATGCGCGCCGGAACCGCGACGGTGAAATATCCCTTCGCGCCACTGGAGGTCAGCCCTGGCTTTCGCGGAAAACCGGACCTGATGCCCAGCCAATGTATTGCCTGCGGTGCCTGCGCCTGTGCTTGTCCGGCAAATGCGCTGACTATCCAGACCGACGACCAGCAAAATTCGCGCACCTGGCAGCTCTATCTGGGGCGTTGTATTTACTGCGGACGTTGTGAAGAAGTGTGCCCGACCAGAGCCATCCAGCTTACCAATAACTTTGAACTGACCGTCACCAATAAAGCCGATCTCTATACCCGCGCGACGTTCCATCTACAACGTTGCAGCCGTTGCGAACGCCCGTTTGCCCCGCAAAAAACCATCGCACTGGCTGCTGAATTGTTAGCACAGCAACAAAATGCGCCACAAAACCGCGAAATGTTGTGGGCGCAAGCGAGCGTCTGCCCGGAATGCAAACAACGCGCGACGCTGATCAACGACGATACAGATGTACTGCTGGTGGCTAAGGAGCAGCTATGA", + "dna_sequence_length": 546, + "functions": [ + "hydrogenase 4, Fe-S subunit" + ], + "id": "CDS_2470", + "location": [ + [ + "NC_000913", + 2610164, + "+", + 546 + ] + ], + "md5": "84c5f02c50c3879285a130e504855e0a", + "parent_gene": "", + "protein_md5": "d8a3e3ff10107f51865e21b469fca63d", + "protein_translation": "MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQL", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008198" + ], + [ + "gene_synonym", + "ECK2485" + ], + [ + "gene_synonym", + "EcoGene:EG14217" + ], + [ + "gene_synonym", + "GI:16130414" + ], + [ + "gene_synonym", + "GeneID:946966" + ], + [ + "gene_synonym", + "JW5805" + ], + [ + "gene_synonym", + "NP_416984.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77668" + ], + [ + "gene_synonym", + "b2489" + ], + [ + "gene_synonym", + "hyfI" + ] + ], + "dna_sequence": "ATGAGTCCAGTGCTTACACAACATGTCAGCCAGCCCATCACGCTGGACGAGCAAACGCAAAAGATGAAGCGGCATTTGCTACAGGATATCCGTCGCTCGGCTTACGTTTATCGCGTCGATTGCGGCGGCTGCAACGCCTGTGAAATCGAAATTTTTGCTGCCATTACACCAGTATTCGACGCAGAACGTTTTGGCATTAAGGTTGTTTCATCACCGCGTCACGCCGATATTTTGTTATTTACTGGCGCAGTCACCCGGGCGATGCGTATGCCTGCACTTCGGGCGTATGAGTCTGCCCCCGATCATAAAATTTGTGTTTCCTACGGCGCGTGCGGTGTCGGCGGCGGTATTTTCCACGATCTCTACAGCGTCTGGGGCGGTAGCGACACCATTGTCCCCATTGATGTTTGGATCCCCGGCTGCCCGCCAACACCGGCCGCCACCATTCACGGTTTCGCCGTGGCGCTCGGTTTGCTGCAACAGAAGATTCACGCTGTGGATTATCGCGATCCCACCGGGGTGACTATGCAACCGTTGTGGCCGCAGATCCCGCCATCACAGCGTATCGCCATTGAGCGAGAAGCGCGGCGGCTGGCGGGCTATCGTCAGGGGCGAGAAATTTGCGATCGGCTCCTGCGCCATTTAAGCGACGATCCTACAGGAAATCGGGTTAACACCTGGTTGCGCGATGCCGACGATCCACGTCTCAATAGTATCGTTCAGCAACTCTTTCGCGTACTCCGGGGGTTACATGACTGA", + "dna_sequence_length": 759, + "functions": [ + "hydrogenase 4, Fe-S subunit" + ], + "id": "CDS_2471", + "location": [ + [ + "NC_000913", + 2610706, + "+", + 759 + ] + ], + "md5": "73083f8c6a5eb2f4117f5f27c4edc362", + "parent_gene": "", + "protein_md5": "585e5fe656e2a7637d40475c5e625221", + "protein_translation": "MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008200" + ], + [ + "gene_synonym", + "ECK2486" + ], + [ + "gene_synonym", + "EcoGene:EG14218" + ], + [ + "gene_synonym", + "GI:90111446" + ], + [ + "gene_synonym", + "GeneID:947713" + ], + [ + "gene_synonym", + "JW2475" + ], + [ + "gene_synonym", + "NP_416985.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77453" + ], + [ + "gene_synonym", + "b2490" + ], + [ + "gene_synonym", + "hyfJ" + ] + ], + "dna_sequence": "ATGACTGAAGAGTGCGGGGAAATTGTTTTCTGGACGCTGCGAAAAAAGTTTGTCGCCAGTAGCGACGAGATGCCGGAACACAGCTCTCAGGTAATGTATTACTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGCACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGTTGACCCGGGCATTCGCGCCACTGGCGGATGACGCGACGTCTGTGTGGCAGGCGCGTAGCATTCAATTCATTCATCTGTTGGATGAAATTGTGCAGGAACCGGCCATCTATCTGATGGCCAGAAAAATTGCGTGA", + "dna_sequence_length": 414, + "functions": [ + "putative processing element hydrogenase 4" + ], + "id": "CDS_2472", + "location": [ + [ + "NC_000913", + 2611457, + "+", + 414 + ] + ], + "md5": "58d4e0841ff73d8e0e1c9ab0f70903af", + "parent_gene": "", + "protein_md5": "089b02b48f3fa3909d3585ecae01c91f", + "protein_translation": "MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008204" + ], + [ + "gene_synonym", + "ECK2487" + ], + [ + "gene_synonym", + "EcoGene:EG14219" + ], + [ + "gene_synonym", + "GI:90111447" + ], + [ + "gene_synonym", + "GeneID:948886" + ], + [ + "gene_synonym", + "JW2476" + ], + [ + "gene_synonym", + "NP_416986.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71229" + ], + [ + "gene_synonym", + "b2491" + ], + [ + "gene_synonym", + "hyfR" + ] + ], + "dna_sequence": "ATGGCTATGTCAGACGAGGCGATGTTTGCCCCGCCACAAGGAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTGGAATGGCGGAGCTACGCTTTATTCGCACCCACGGCAGTCGTTTTACTTCCCAGGATTGCACACTGTTTAACTGGCTGGCGCGGATAATCACCCCGGTTCTGCAATCATGGCTCAATGATGAAGAACAGCAGGTGGCGCTGCGTTTGCTGGAGAAAGATCGCGATCATCATCGGGTACTGGTTGATATTACTAATGCAGTGCTGTCACATCTTGATCTCGACGATCTGATCGCTGACGTCGCTCGTGAGATCCATCATTTTTTCGGTCTGGCTTCAGTCAGTATGGTACTGGGCGATCATCGAAAGAACGAGAAGTTCAGCCTGTGGTGCAGCGATCTTTCTGCCTCACATTGTGCGTGTCTGCCACGCTGTATGCCTGGCGAAAGTGTATTGCTGACACAAACGCTACAAACCCGACAACCGACCTTGACGCACCGTGCAGATGATCTGTTTCTCTGGCAACGCGACCCGTTATTACTCTTACTTGCATCTAACGGCTGCGAATCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGTTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGACCTGCTCCAGCAGGTAGATATTGTGGCGAAGAGCGACAGTACGGTGTTGATTTGTGGTGAAACCGGAACTGGCAAAGAGGTGATCGCCAGAGCGATCCATCAACTTAGCCCGCGACGCGACAAGCCGCTGGTCAAAATCAACTGCGCTGCCATCCCCGCCAGTCTTCTGGAAAGTGAGTTATTCGGTCATGACAAAGGGGCGTTTACTGGTGCGATTAATACCCATCGTGGTCGTTTTGAAATTGCCGATGGCGGCACGTTGTTTCTCGATGAAATTGGCGATCTGCCGTTAGAACTTCAGCCTAAACTGCTGCGCGTATTGCAGGAGCGGGAGATTGAGCGTCTCGGCGGGAGTAGAACGATCCCGGTGAATGTCAGAGTCATTGCCGCCACCAACCGTGATTTGTGGCAAATGGTTGAAGATCGCCAGTTTCGCAGCGATCTCTTTTATCGCCTGAATGTCTTCCCACTGGAATTGCCGCCGCTACGCGACCGTCCGGAAGATATCCCTCTTTTAGCAAAACATTTCACGCAAAAAATGGCGCGCCATATGAATCGCGCAATTGACGCCATCCCGACCGAGGCACTACGCCAGTTGATGTCGTGGGATTGGCCGGGCAACGTGCGCGAGCTGGAAAACGTGATTGAGCGGGCGGTACTGTTGACTCGTGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGCTGGGGATCTCGGTTCGCGAGGTGTTGTAA", + "dna_sequence_length": 2013, + "functions": [ + "hydrogenase-4 transcriptional activator" + ], + "id": "CDS_2473", + "location": [ + [ + "NC_000913", + 2611900, + "+", + 2013 + ] + ], + "md5": "4edbb08cc522144b4d3de164834c5cb9", + "parent_gene": "", + "protein_md5": "64c36310818379acae763dab37527c29", + "protein_translation": "MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGIGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL", + "protein_translation_length": 670, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008206" + ], + [ + "gene_synonym", + "ECK2488" + ], + [ + "gene_synonym", + "EcoGene:EG14220" + ], + [ + "gene_synonym", + "GI:16130417" + ], + [ + "gene_synonym", + "GeneID:949032" + ], + [ + "gene_synonym", + "JW2477" + ], + [ + "gene_synonym", + "NP_416987.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77733" + ], + [ + "gene_synonym", + "b2492" + ], + [ + "gene_synonym", + "focB" + ] + ], + "dna_sequence": "ATGAGAAACAAACTCTCTTTCGACTTGCAGTTGAGCGCCAGAAAAGCGGCAATCGCTGAACGGATTGCCGCCCATAAAATTGCCCGCAGTAAAGTGTCGGTCTTTTTAATGGCGATGTCCGCTGGCGTGTTTATGGCGATCGGATTTACTTTTTACCTTTCCGTTATCGCCGATGCCCCGTCTTCACAGGCATTAACCCATCTGGTGGGCGGCCTTTGCTTTACACTCGGCTTTATTTTGCTGGCGGTTTGCGGCACCAGCCTGTTCACCTCGTCGGTAATGACGGTGATGGCAAAAAGTCGGGGCGTTATTAGTTGGCGAACTTGGCTGATTAACGCACTTCTGGTGGCCTGCGGTAATCTGGCAGGTATTGCCTGTTTCAGTTTGTTAATCTGGTTTTCCGGGCTGGTGATGAGTGAAAACGCGATGTGGGGAGTCGCGGTTTTACACTGCGCCGAGGGCAAAATGCATCATACATTTACTGAATCTGTCAGCCTCGGCATTATGTGCAATCTGATGGTTTGCCTGGCGCTGTGGATGAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGA", + "dna_sequence_length": 849, + "functions": [ + "putative formate transporter" + ], + "id": "CDS_2474", + "location": [ + [ + "NC_000913", + 2613934, + "+", + 849 + ] + ], + "md5": "f896b50f8a0a40407f303363f8c0dfda", + "parent_gene": "", + "protein_md5": "80e7febfcb2f4cd46680d6c9ef49e6a9", + "protein_translation": "MRNKLSFDLQLSARKAAIAERIAAHKIARSKVSVFLMAMSAGVFMAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPFAIAIRHFAPPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNIIGGAVLVSMCYRAIYLRQEP", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008208" + ], + [ + "gene_synonym", + "ECK2489" + ], + [ + "gene_synonym", + "EcoGene:EG14221" + ], + [ + "gene_synonym", + "GI:16130418" + ], + [ + "gene_synonym", + "GeneID:945894" + ], + [ + "gene_synonym", + "JW2478" + ], + [ + "gene_synonym", + "NP_416988.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI9" + ], + [ + "gene_synonym", + "b2493" + ], + [ + "gene_synonym", + "perM" + ], + [ + "gene_synonym", + "yfgO" + ] + ], + "dna_sequence": "ATGCTCGAAATGTTGATGCAATGGTATCGCCGCCGTTTTAGCGACCCGGAAGCGATTGCCTTGCTGGTTATTTTAGTTGCCGGATTTGGCATTATCTTTTTCTTTAGTGGCCTGCTTGCTCCGTTGCTGGTGGCTATTGTGCTGGCCTATTTGCTGGAATGGCCAACCGTGCGTCTGCAATCTATTGGCTGCTCCCGCCGCTGGGCGACGTCGATTGTATTGGTGGTTTTCGTCGGTATATTGCTACTGATGGCGTTCGTGGTACTGCCTATCGCCTGGCAACAGGGCATCTACTTAATCCGCGATATGCCGGGGATGCTCAATAAGCTTTCTGACTTTGCCGCCACGTTGCCGCGCCGCTATCCGGCGTTAATGGACGCGGGCATTATTGATGCAATGGCCGAAAATATGCGCAGTCGGATGCTGACCATGGGCGATTCGGTGGTGAAAATTTCCCTCGCCTCGCTGGTCGGTTTGCTGACCATAGCCGTCTATCTGGTGCTGGTGCCATTGATGGTCTTCTTCCTGCTGAAAGACAAAGAGCAGATGCTGAACGCCGTTCGCCGGGTGCTGCCGCGTAACCGTGGGCTGGCAGGACAGGTGTGGAAGGAGATGAATCAACAAATCACCAACTATATCCGCGGCAAAGTGCTGGAGATGATCGTGGTGGGGATCGCCACCTGGCTGGGGTTCTTGCTCTTCGGGCTGAACTATTCGCTGCTGCTGGCAGTGCTGGTCGGCTTCTCGGTTCTTATTCCGTACATTGGCGCATTTGTGGTGACCATTCCGGTGGTTGGCGTGGCGCTATTCCAGTTTGGCGCAGGTACTGAATTCTGGAGCTGCTTCGCGGTGTATCTGATTATTCAGGCGCTGGACGGCAACCTGTTAGTGCCGGTGTTGTTCTCCGAAGCGGTTAACCTGCATCCGCTGGTGATTATTTTATCGGTGGTGATCTTCGGTGGTTTGTGGGGATTCTGGGGCGTATTCTTCGCCATTCCGTTGGCGACGCTGATCAAAGCCGTGATTCATGCCTGGCCCGATGGGCAAATCGCGCAAGAATAA", + "dna_sequence_length": 1062, + "functions": [ + "putative UPF0118 family inner membrane permease" + ], + "id": "CDS_2475", + "location": [ + [ + "NC_000913", + 2615881, + "-", + 1062 + ] + ], + "md5": "52d0970bcf5c4b8707f4b9451caec9a5", + "parent_gene": "", + "protein_md5": "06bbef67f05e6a9bce12f6fea70defe0", + "protein_translation": "MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008212" + ], + [ + "gene_synonym", + "ECK2490" + ], + [ + "gene_synonym", + "EcoGene:EG14199" + ], + [ + "gene_synonym", + "GI:16130419" + ], + [ + "gene_synonym", + "GeneID:947029" + ], + [ + "gene_synonym", + "JW2479" + ], + [ + "gene_synonym", + "NP_416989.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66948" + ], + [ + "gene_synonym", + "b2494" + ], + [ + "gene_synonym", + "bepA" + ], + [ + "gene_synonym", + "yfgC" + ] + ], + "dna_sequence": "ATGTTCAGGCAGTTGAAAAAAAACCTGGTTGCAACCCTCATTGCTGCTATGACCATTGGTCAGGTAGCCCCGGCGTTTGCCGACAGCGCAGACACCTTGCCGGATATGGGAACCTCCGCAGGAAGCACGCTTTCCATTGGTCAGGAAATGCAGATGGGCGACTATTATGTCCGCCAGCTACGCGGCAGCGCGCCGTTAATTAATGACCCGCTGTTAACGCAATATATTAATTCGCTGGGGATGCGTCTGGTTTCGCATGCCAATTCGGTTAAGACACCGTTTCATTTTTTTCTGATCAACAACGACGAAATTAACGCCTTTGCTTTCTTTGGCGGCAACGTGGTGCTGCACTCTGCCCTGTTCCGTTATTCCGATAACGAAAGTCAACTGGCTTCAGTTATGGCGCACGAAATCTCCCACGTCACCCAACGTCACCTGGCGCGAGCGATGGAAGATCAGCAGCGCAGCGCGCCGCTGACCTGGGTCGGCGCGTTAGGTTCTATTTTACTGGCGATGGCCAGTCCGCAGGCGGGGATGGCGGCGCTGACCGGTACACTGGCGGGAACGCGTCAGGGGATGATCAGTTTCACCCAGCAAAATGAACAGGAAGCGGACCGCATTGGTATTCAGGTGCTGCAACGCTCGGGATTCGATCCGCAGGCGATGCCAACCTTCCTCGAAAAATTACTCGATCAGGCGCGTTACTCCTCGCGCCCGCCGGAAATTTTATTGACTCACCCGTTGCCGGAAAGTCGTCTGGCAGATGCCCGCAACCGTGCTAATCAGATGCGCCCGATGGTGGTGCAGTCGTCGGAAGATTTCTATCTGGCGAAAGCGCGCACACTGGGGATGTATAATTCCGGACGTAACCAGCTCACCAGTGATTTGCTGGATGAATGGGCGAAAGGAAACGTTCGTCAGCAACGAGCAGCACAATATGGTCGTGCTTTACAGGCGATGGAAGCCAATAAATACGACGAGGCGCGTAAAACGCTGCAACCGTTACTGGCGGCAGAACCTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATGCGCTCGCCGGACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAA", + "dna_sequence_length": 1464, + "functions": [ + "OM protein maintenance and assembly metalloprotease and chaperone, periplasmic" + ], + "id": "CDS_2476", + "location": [ + [ + "NC_000913", + 2616094, + "+", + 1464 + ] + ], + "md5": "1800c49e6dcbaf9c85971365516e7945", + "parent_gene": "", + "protein_md5": "ff6960d0cb988b94c8053c5b568dbb89", + "protein_translation": "MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM", + "protein_translation_length": 487, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008214" + ], + [ + "gene_synonym", + "ECK2491" + ], + [ + "gene_synonym", + "EcoGene:EG14200" + ], + [ + "gene_synonym", + "GI:16130420" + ], + [ + "gene_synonym", + "GeneID:946974" + ], + [ + "gene_synonym", + "JW2480" + ], + [ + "gene_synonym", + "NP_416990.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76569" + ], + [ + "gene_synonym", + "b2495" + ], + [ + "gene_synonym", + "yfgD" + ] + ], + "dna_sequence": "ATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAA", + "dna_sequence_length": 360, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2477", + "location": [ + [ + "NC_000913", + 2617578, + "+", + 360 + ] + ], + "md5": "3da554c3ccee2ef5d78d6c64f5f14ee7", + "parent_gene": "", + "protein_md5": "e3af5bbecb62cf2994c9eb79c05c4ac9", + "protein_translation": "MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008217" + ], + [ + "gene_synonym", + "ECK2492" + ], + [ + "gene_synonym", + "EcoGene:EG14201" + ], + [ + "gene_synonym", + "GI:226524737" + ], + [ + "gene_synonym", + "GeneID:946977" + ], + [ + "gene_synonym", + "JW5397" + ], + [ + "gene_synonym", + "NP_416991.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69931" + ], + [ + "gene_synonym", + "b2496" + ], + [ + "gene_synonym", + "hda" + ], + [ + "gene_synonym", + "idaB" + ], + [ + "gene_synonym", + "yfgE" + ] + ], + "dna_sequence": "CTGAACACACCGGCACAGCTCTCTTTGCCACTTTATCTTCCTGACGACGAAACCTTTGCAAGTTTCTGGCCGGGGGATAACTCCTCTTTACTGGCCGCGCTGCAAAACGTGCTGCGTCAGGAACATAGCGGTTACATCTATCTCTGGGCACGCGAAGGCGCGGGGCGCAGCCATCTGCTGCACGCGGCTTGCGCGGAATTGTCGCAGCGTGGCGATGCGGTGGGCTATGTCCCGCTGGATAAACGCACCTGGTTTGTTCCGGAAGTGCTCGACGGTATGGAGCATTTGTCGCTGGTCTGTATCGACAACATTGAGTGTATTGCAGGCGATGAGTTGTGGGAGATGGCGATTTTCGATCTCTACAATCGAATTCTGGAATCGGGCAAAACACGGTTGTTGATCACCGGCGATCGTCCACCGCGGCAGTTGAATCTGGGATTACCGGATCTCGCGTCGCGACTCGACTGGGGGCAGATCTACAAATTGCAGCCACTTTCTGATGAAGATAAGTTGCAGGCGCTACAGTTACGCGCGCGTTTGCGTGGTTTTGAACTGCCGGAAGATGTGGGGCGTTTCTTGCTGAAGCGGCTCGACAGAGAAATGCGCACGCTATTTATGACGTTGGATCAGTTGGATCGTGCGTCGATTACCGCGCAACGTAAGCTGACCATTCCGTTTGTGAAAGAAATTCTGAAGTTGTAG", + "dna_sequence_length": 702, + "functions": [ + "ATPase regulatory factor involved in DnaA inactivation" + ], + "id": "CDS_2478", + "location": [ + [ + "NC_000913", + 2618776, + "-", + 702 + ] + ], + "md5": "3e23d21deadc0e7e5b29342b6db7a68a", + "parent_gene": "", + "protein_md5": "ec1a7276a13f1f8c0caa0ce12a240087", + "protein_translation": "MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008219" + ], + [ + "gene_synonym", + "ECK2493" + ], + [ + "gene_synonym", + "EcoGene:EG12129" + ], + [ + "gene_synonym", + "GI:16130422" + ], + [ + "gene_synonym", + "GeneID:946978" + ], + [ + "gene_synonym", + "JW2482" + ], + [ + "gene_synonym", + "NP_416992.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM7" + ], + [ + "gene_synonym", + "b2497" + ], + [ + "gene_synonym", + "uraA" + ] + ], + "dna_sequence": "ATGACGCGCCGTGCTATCGGGGTGAGTGAAAGACCGCCACTTTTACAGACAATCCCGCTTAGTTTGCAACATTTGTTCGCCATGTTTGGTGCAACCGTCCTGGTGCCCGTCTTATTTCATATTAACCCGGCGACTGTACTGTTATTTAACGGTATTGGAACGCTGCTGTATCTCTTCATCTGTAAAGGGAAAATTCCGGCTTATCTTGGTTCCAGCTTTGCCTTTATTTCACCGGTATTGTTACTGTTGCCGTTAGGGTATGAAGTCGCGCTGGGCGGCTTTATTATGTGCGGCGTGCTGTTCTGCCTGGTTTCTTTTATCGTGAAGAAAGCGGGGACCGGCTGGCTGGACGTGCTGTTTCCACCTGCGGCAATGGGCGCAATCGTTGCCGTCATCGGTCTGGAGCTGGCGGGCGTAGCTGCCGGTATGGCGGGTTTACTCCCGGCTGAAGGGCAAACGCCAGACTCCAAAACCATCATCATCTCTATTACCACCCTGGCGGTCACGGTTTTAGGTTCCGTGCTGTTTCGTGGTTTCCTGGCAATTATCCCGATTTTAATTGGCGTGCTGGTGGGGTACGCGCTCTCTTTCGCAATGGGAATTGTCGATACCACGCCGATTATTAATGCTCACTGGTTTGCGCTGCCAACCCTCTATACGCCGCGCTTCGAGTGGTTTGCCATTCTGACTATTCTGCCAGCGGCGTTAGTGGTTATTGCCGAACACGTAGGGCACCTGGTAGTAACGGCTAATATCGTCAAAAAAGATCTGCTGCGCGATCCAGGTCTGCACCGTTCGATGTTTGCTAATGGCTTGTCGACCGTGATTTCCGGCTTCTTTGGCTCTACGCCAAATACTACTTACGGAGAAAACATTGGCGTGATGGCGATCACCCGTGTTTACAGTACCTGGGTTATCGGCGGGGCGGCGATTTTCGCTATCCTGCTTTCCTGCGTCGGTAAACTGGCTGCCGCTATCCAGATGATCCCATTGCCGGTGATGGGCGGCGTTTCGCTGCTGCTTTATGGTGTCATCGGTGCTTCCGGTATTCGTGTTTTGATCGAATCGAAAGTGGATTACAACAAAGCACAGAACCTGATCCTGACTTCCGTGATTTTGATCATCGGCGTCAGTGGCGCGAAGGTAAACATCGGCGCGGCGGAGTTAAAAGGTATGGCGCTGGCGACCATCGTCGGTATCGGCTTAAGTTTGATCTTCAAACTGATCAGTGTGCTGCGCCCTGAAGAAGTGGTGCTGGACGCAGAAGACGCGGATATAACAGACAAATAA", + "dna_sequence_length": 1290, + "functions": [ + "uracil permease" + ], + "id": "CDS_2479", + "location": [ + [ + "NC_000913", + 2620160, + "-", + 1290 + ] + ], + "md5": "a8067a2160e596e79b72d147f18e12f3", + "parent_gene": "", + "protein_md5": "28faa2e57e32ec11f033df3893537d41", + "protein_translation": "MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLISVLRPEEVVLDAEDADITDK", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008224" + ], + [ + "gene_synonym", + "ECK2494" + ], + [ + "gene_synonym", + "EcoGene:EG11332" + ], + [ + "gene_synonym", + "GI:90111448" + ], + [ + "gene_synonym", + "GeneID:946979" + ], + [ + "gene_synonym", + "JW2483" + ], + [ + "gene_synonym", + "NP_416993.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8F0" + ], + [ + "gene_synonym", + "b2498" + ], + [ + "gene_synonym", + "upp" + ], + [ + "gene_synonym", + "uraP" + ] + ], + "dna_sequence": "ATGAAGATCGTGGAAGTCAAACACCCACTCGTCAAACACAAGCTGGGACTGATGCGTGAGCAAGATATCAGCACCAAGCGCTTTCGCGAACTCGCTTCCGAAGTGGGTAGCCTGCTGACTTACGAAGCGACCGCCGACCTCGAAACGGAAAAAGTAACTATCGAAGGCTGGAACGGCCCGGTAGAAATCGACCAGATCAAAGGTAAGAAAATTACCGTTGTGCCAATTCTGCGTGCGGGTCTTGGTATGATGGACGGTGTGCTGGAAAACGTTCCGAGCGCGCGCATCAGCGTTGTCGGTATGTACCGTAATGAAGAAACGCTGGAGCCGGTACCGTACTTCCAGAAACTGGTTTCTAACATCGATGAGCGTATGGCGCTGATCGTTGACCCAATGCTGGCAACCGGTGGTTCCGTTATCGCGACCATCGACCTGCTGAAAAAAGCGGGCTGCAGCAGCATCAAAGTTCTGGTGCTGGTAGCTGCGCCAGAAGGTATCGCTGCGCTGGAAAAAGCGCACCCGGACGTCGAACTGTATACCGCATCGATTGATCAGGGACTGAACGAGCACGGATACATTATTCCGGGCCTCGGCGATGCCGGTGACAAAATCTTTGGTACGAAATAA", + "dna_sequence_length": 627, + "functions": [ + "uracil phosphoribosyltransferase" + ], + "id": "CDS_2480", + "location": [ + [ + "NC_000913", + 2620872, + "-", + 627 + ] + ], + "md5": "533a30bf663d2c00cccc42586d833956", + "parent_gene": "", + "protein_md5": "03976b836c485a5ee89901e09d2fb723", + "protein_translation": "MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008230" + ], + [ + "gene_synonym", + "ECK2495" + ], + [ + "gene_synonym", + "EcoGene:EG10798" + ], + [ + "gene_synonym", + "GI:16130424" + ], + [ + "gene_synonym", + "GeneID:946975" + ], + [ + "gene_synonym", + "JW2484" + ], + [ + "gene_synonym", + "NP_416994.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08178" + ], + [ + "gene_synonym", + "b2499" + ], + [ + "gene_synonym", + "purG" + ], + [ + "gene_synonym", + "purI" + ], + [ + "gene_synonym", + "purM" + ] + ], + "dna_sequence": "GTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGTGCATTGCCGCAAAAATATCGTGAACCCGTGCTGGTTTCTGGCACTGACGGCGTAGGTACCAAGCTGCGTCTGGCAATGGACTTAAAACGTCACGACACCATTGGTATTGATCTGGTCGCCATGTGCGTTAATGACCTGGTGGTGCAAGGTGCAGAGCCGCTGTTTTTCCTCGACTATTACGCAACCGGAAAACTGGATGTTGATACCGCTTCAGCGGTGATCAGCGGCATTGCGGAAGGTTGTCTGCAATCAGGCTGTTCACTGGTGGGTGGCGAAACGGCAGAAATGCCGGGGATGTATCACGGTGAGGATTACGATGTCGCGGGTTTCTGCGTTGGCGTGGTAGAAAAATCAGAAATCATCGACGGCTCTAAAGTCAGCGACGGCGATGTGCTGATTGCACTCGGTTCCAGCGGTCCACACTCGAACGGCTATTCGCTGGTGCGCAAAATTCTTGAAGTCAGCGGTTGTGATCCGCAAACCACCGAACTTGATGGTAAGCCATTAGCCGATCATCTGCTGGCACCGACCCGCATTTACGTGAAGTCAGTGCTGGAGTTGATTGAAAAGGTCGATGTGCATGCCATTGCGCACCTGACCGGCGGCGGCTTCTGGGAAAACATTCCGCGCGTATTGCCAGATAATACTCAGGCAGTGATTGATGAATCTTCCTGGCAGTGGCCGGAAGTGTTCAACTGGCTGCAAACGGCAGGTAACGTTGAGCACCATGAAATGTATCGCACCTTCAACTGCGGCGTCGGGATGATTATTGCCCTGCCTGCTCCGGAAGTGGACAAAGCCCTCGCCCTGCTCAATGCCAACGGTGAAAACGCGTGGAAAATCGGTATCATCAAAGCCTCTGATTCCGAACAACGCGTGGTTATCGAATAA", + "dna_sequence_length": 1038, + "functions": [ + "phosphoribosylaminoimidazole synthetase" + ], + "id": "CDS_2481", + "location": [ + [ + "NC_000913", + 2621197, + "+", + 1038 + ] + ], + "md5": "96d44f3c0e5da7edd7e7c0f6a2e85f12", + "parent_gene": "", + "protein_md5": "93909b12e76a5ec3be97a0582a422434", + "protein_translation": "MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIKASDSEQRVVIE", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008232" + ], + [ + "gene_synonym", + "ECK2496" + ], + [ + "gene_synonym", + "EcoGene:EG10799" + ], + [ + "gene_synonym", + "GI:16130425" + ], + [ + "gene_synonym", + "GeneID:946973" + ], + [ + "gene_synonym", + "JW2485" + ], + [ + "gene_synonym", + "NP_416995.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08179" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "b2500" + ], + [ + "gene_synonym", + "purN" + ] + ], + "dna_sequence": "ATGAATATTGTGGTGCTTATTTCCGGCAACGGAAGTAATTTACAGGCAATTATTGACGCCTGTAAAACCAACAAAATTAAAGGCACCGTACGGGCAGTTTTCAGCAATAAGGCCGACGCGTTCGGCCTTGAACGCGCCCGCCAGGCGGGTATTGCAACGCATACGCTCATCGCCAGCGCGTTTGACAGTCGTGAAGCCTATGACCGGGAGTTGATTCATGAAATCGACATGTACGCACCCGATGTGGTCGTGCTGGCTGGTTTTATGCGCATTCTCAGCCCGGCGTTTGTCTCCCACTATGCCGGGCGTTTGCTGAACATTCACCCTTCTCTGCTGCCGAAATATCCCGGATTACACACCCATCGTCAGGCGCTGGAAAATGGCGATGAAGAGCACGGTACATCGGTGCATTTCGTCACCGATGAACTGGACGGTGGCCCGGTTATTTTACAGGCGAAAGTCCCGGTATTTGCTGGTGATTCGGAAGATGACATCACCGCCCGCGTGCAAACCCAGGAACACGCCATTTATCCACTGGTGATTAGCTGGTTTGCCGATGGTCGTCTGAAAATGCACGAAAACGCCGCGTGGCTGGATGGTCAACGTCTGCCGCCGCAGGGCTACGCTGCCGACGAGTAA", + "dna_sequence_length": 639, + "functions": [ + "phosphoribosylglycinamide formyltransferase 1" + ], + "id": "CDS_2482", + "location": [ + [ + "NC_000913", + 2622234, + "+", + 639 + ] + ], + "md5": "55895388b32569a8488794bdcc3ab98f", + "parent_gene": "", + "protein_md5": "3e687d05b19d5cd4a374f92003ff6a79", + "protein_translation": "MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008235" + ], + [ + "gene_synonym", + "ECK2497" + ], + [ + "gene_synonym", + "EcoGene:EG11510" + ], + [ + "gene_synonym", + "GI:16130426" + ], + [ + "gene_synonym", + "GeneID:946971" + ], + [ + "gene_synonym", + "JW2486" + ], + [ + "gene_synonym", + "NP_416996.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7B1" + ], + [ + "gene_synonym", + "b2501" + ], + [ + "gene_synonym", + "ppk" + ] + ], + "dna_sequence": "ATGGGTCAGGAAAAGCTATACATCGAAAAAGAGCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTCCCGCCATTTACTGGGCAAAATTCAGTCCCGGGTGCTGAAAGCCGATCAGGAATTCGACGGCCTCTACAACGAGCTATTGCTGGAGATGGCGCGCAACCAGATCTTCCTGATTAATGAACGCCAGCTCTCCGTCAATCAACAAAACTGGCTGCGTCATTATTTTAAGCAGTATCTGCGTCAGCACATTACGCCGATTTTAATCAATCCTGACACTGACTTAGTGCAGTTCCTGAAAGATGATTACACCTATCTGGCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAGAAGCGCCGCGTCGACGCAAGCCGATGATTCTTCTGGATAACATTCTGCGTTACTGCCTTGATGATATTTTCAAAGGCTTCTTTGATTATGACGCGCTGAATGCCTATTCAATGAAGATGACCCGCGATGCCGAATACGATTTAGTGCATGAGATGGAAGCCAGCCTGATGGAGTTGATGTCTTCCAGTCTCAAGCAGCGTTTAACTGCTGAGCCGGTGCGTTTTGTTTATCAGCGCGATATGCCCAATGCGCTGGTTGAAGTGTTACGCGAAAAACTGACTATTTCCCGCTACGACTCCATCGTCCCCGGCGGTCGTTATCATAATTTTAAAGACTTTATTAATTTCCCCAATGTCGGCAAAGCCAATCTGGTGAACAAACCACTGCCGCGTTTACGCCATATTTGGTTTGATAAAGCCCAGTTCCGCAATGGTTTTGATGCCATTCGCGAACGCGATGTGTTGCTCTATTATCCTTATCACACCTTTGAGCATGTGCTGGAACTGCTGCGTCAGGCTTCGTTCGACCCGAGCGTACTGGCGATTAAAATTAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTATCACCCTGAAGCTAAATAACCTTGTCGATAAAGGCCTGGTTGATCGTCTGTATGCGGCCTCCAGCTCCGGCGTACCGGTTAATCTGCTGGTTCGCGGAATGTGTTCGCTGATCCCCAATCTGGAAGGCATTAGCGACAACATTCGTGCCATCAGTATTGTTGACCGTTACCTTGAACATGACCGGGTTTATATTTTTGAAAATGGCGGCGATAAAAAGGTCTACCTTTCTTCCGCCGACTGGATGACGCGCAATATTGATTATCGTATTGAAGTGGCGACGCCGCTGCTCGATCCGCGCCTGAAGCAGCGGGTACTGGACATCATCGACATATTGTTCAGCGATACGGTCAAAGCACGTTATATCGATAAAGAACTCAGTAATCGCTACGTTCCCCGCGGCAATCGCCGCAAAGTACGGGCGCAGTTGGCGATTTATGACTACATCAAATCACTCGAACAACCTGAATAA", + "dna_sequence_length": 2067, + "functions": [ + "polyphosphate kinase, component of RNA degradosome" + ], + "id": "CDS_2483", + "location": [ + [ + "NC_000913", + 2623044, + "+", + 2067 + ] + ], + "md5": "55b994c15df0caddafbd02e2305f38b8", + "parent_gene": "", + "protein_md5": "2d49aa196f947cd0875399f792333c9a", + "protein_translation": "MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIKSLEQPE", + "protein_translation_length": 688, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008238" + ], + [ + "gene_synonym", + "ECK2498" + ], + [ + "gene_synonym", + "EcoGene:EG11403" + ], + [ + "gene_synonym", + "GI:16130427" + ], + [ + "gene_synonym", + "GeneID:946970" + ], + [ + "gene_synonym", + "JW2487" + ], + [ + "gene_synonym", + "NP_416997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL6" + ], + [ + "gene_synonym", + "b2502" + ], + [ + "gene_synonym", + "ppx" + ] + ], + "dna_sequence": "ATGCCAATACACGATAAATCCCCTCGTCCGCAGGAGTTTGCTGCGGTCGATCTTGGTTCAAACAGTTTTCACATGGTCATAGCCCGTGTGGTAGATGGTGCCATGCAGATTATTGGCCGCCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTCTGAAACGCGCGGAAAAGGTCATTCCCTACCCGATTGAAATTATTTCCGGTAATGAAGAAGCCCGTCTGATTTTTATGGGCGTGGAACATACCCAACCGGAAAAAGGTCGCAAACTGGTTATTGATATTGGCGGCGGATCTACGGAACTGGTGATTGGTGAAAATTTCGAACCTATTCTCGTTGAAAGCCGCCGGATGGGTTGTGTCAGCTTTGCCCAGCTTTATTTTCCTGGCGGGGTCATCAATAAAGAGAATTTTCAGCGCGCTCGCATGGCGGCAGCACAAAAACTGGAAACTTTAACCTGGCAATTCCGTATTCAGGGCTGGAACGTTGCAATGGGCGCTTCCGGTACCATAAAAGCCGCCCATGAAGTGTTAATGGAAATGGGCGAGAAAGACGGGATAATTACCCCGGAACGTCTGGAAAAACTGGTAAAAGAAGTTTTACGTCACCGTAATTTCGCATCGCTGAGTTTACCGGGTCTTTCCGAAGAGCGGAAAACAGTCTTCGTTCCGGGACTGGCGATTTTATGCGGTGTGTTTGATGCTTTAGCCATCCGTGAACTGCGCCTTTCTGACGGGGCGTTACGCGAAGGCGTACTGTATGAAATGGAAGGACGTTTCCGTCATCAGGATGTGCGTAGTCGCACCGCCAGCAGCCTCGCCAACCAGTATCACATCGACAGCGAACAGGCCCGACGGGTGCTGGATACCACTATGCAAATGTACGAACAGTGGCGGGAACAGCAACCGAAGCTGGCGCATCCGCAACTGGAGGCGCTACTGCGATGGGCCGCCATGCTGCATGAGGTCGGGTTGAATATCAACCACAGCGGTTTGCATCGCCACTCCGCTTATATTCTGCAAAACAGTGACTTGCCGGGTTTTAATCAGGAACAGCAGCTGATGATGGCGACACTGGTGCGCTATCACCGTAAAGCGATTAAGCTCGACGATCTACCGCGCTTTACCTTGTTTAAGAAGAAACAGTTCCTGCCACTGATACAGCTATTGCGCCTTGGCGTATTACTCAACAATCAACGTCAGGCAACCACCACACCGCCAACATTGACGCTGATTACTGATGACAGTCACTGGACACTGCGTTTCCCGCATGACTGGTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAA", + "dna_sequence_length": 1542, + "functions": [ + "exopolyphosphatase" + ], + "id": "CDS_2484", + "location": [ + [ + "NC_000913", + 2625115, + "+", + 1542 + ] + ], + "md5": "9dd7667c4032fa2f0066a04707a1ba78", + "parent_gene": "", + "protein_md5": "2421f9ce637269efdde42df52115e903", + "protein_translation": "MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEESTPEIAA", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008240" + ], + [ + "gene_synonym", + "ECK2499" + ], + [ + "gene_synonym", + "EcoGene:EG14202" + ], + [ + "gene_synonym", + "GI:16130428" + ], + [ + "gene_synonym", + "GeneID:946968" + ], + [ + "gene_synonym", + "JW2488" + ], + [ + "gene_synonym", + "NP_416998.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77172" + ], + [ + "gene_synonym", + "b2503" + ], + [ + "gene_synonym", + "yfgF" + ] + ], + "dna_sequence": "ATGAAACTGAATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCCTGCCTTCTTTAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCATATTTCTTCCGGTGAGGTTTTTCTCTTTTATCTGCCTCTGGCACTGATGATCAGCATGATGATGTTTTTCAGCTGGGCGGCATTGCCAGGGATCGCCTTAGGGATTTTTGTCCGCAAATATGCAGAGCTGGGTTTTTACGAAACGCTATCATTAACGGCTAATTTTATTATCATTATCATTCTCTGTTGGGGCGGTTACAGGGTCTTTACTCCCCGGCGTAACAACGTTTCACATGGTGATACCCGTTTAATTTCCCAGCGTATATTCTGGCAGATTGTGTTTCCTGCAACGCTGTTTCTGATACTTTTCCAGTTTGCTGCATTTGTAGGATTACTGGCGAGCAGAGAAAATCTGGTCGGTGTCATGCCTTTTAACCTCGGGACTTTAATCAATTATCAGGCCTTACTGGTGGGTAATCTGATCGGTGTCCCGCTGTGCTACTTCATCATTCGGGTAGTGCGAAATCCATTTTATTTACGTAGCTATTATTCGCAATTAAAACAGCAGGTTGATGCCAAAGTCACCAAAAAAGAGTTCGCGCTCTGGCTACTGGCATTAGGTGCTTTATTGTTGCTGTTATGCATGCCGTTAAATGAAAAAAGCACAATTTTTAGCACCAATTATACCTTGTCATTATTGCTGCCCCTGATGATGTGGGGAGCGATGCGCTATGGTTATAAGCTGATTTCGCTGCTCTGGGCGGTCGTGTTGATGATCAGCATCCACAGCTATCAAAATTACATTCCCATTTATCCTGGCTATACCACGCAGCTGACCATAACCTCCTCCAGTTATCTGGTATTCTCTTTTATTGTCAATTATATGGCTGTACTGGCAACCCGTCAGAGAGCGGTAGTCAGACGCATTCAGCGGCTTGCGTATGTGGACCCGGTGGTTCATCTGCCAAATGTTCGCGCCCTGAATCGCGCGTTGCGTGATGCCCCCTGGTCTGCGCTTTGTTATTTACGCATCCCTGGCATGGAAATGCTGGTTAAGAACTATGGCATCATGCTGCGGATTCAATACAAGCAAAAACTTTCTCACTGGCTGTCACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGAATCGCACCAGGAGCGCATTACCGCACTGGATAGCCATCTCAAGCAATTTCGTTTCTTTTGGGATGGCATGCCGATGCAACCGCAGATTGGCGTCAGTTACTGCTATGTGCGCTCGCCAGTGAATCATATCTACCTGCTGCTGGGAGAGCTAAATACGGTCGCCGAACTTTCCATCGTGACCAACGCCCCGGAAAATATGCAGCGTCGCGGGGCAATGTATTTGCAACGCGAATTGAAAGATAAAGTCGCGATGATGAATCGACTACAGCAGGCGCTGGAACACAACCATTTTTTCCTGATGGCCCAGCCGATTACCGGTATGCGTGGTGATGTTTACCATGAAATTCTTCTGCGCATGAAAGGTGAGAATGATGAACTGATCAGCCCCGATAGCTTCTTGCCGGTCGCGCACGAATTTGGTTTATCGTCGAGTATCGACATGTGGGTCATTGAGCATACGCTGCAATTTATGGCTGAAAACAGAGCGAAGATGCCCGCTCACCGTTTTGCTATTAATCTGTCTCCAACCTCGGTATGTCAGGCTCGTTTTCCTGTTGAAGTCAGTCAGTTGCTGGCTAAATATCAGATTGAAGCGTGGCAACTTATTTTTGAAGTCACCGAAAGTAATGCTCTGACCAATGTTAAGCAGGCGCAAATCACCTTGCAGCATCTTCAGGAATTAGGCTGCCAGATTGCGATTGATGATTTCGGCACCGGCTACGCCAGCTATGCGCGGCTTAAAAATGTGAATGCCGATCTGCTTAAAATTGACGGCAGTTTTATCCGCAATATTGTGTCAAATAGTCTGGATTATCAGATAGTGGCATCGATTTGCCACCTGGCGCGAATGAAGAAAATGCTGGTAGTGGCAGAGTACGTTGAAAACGAAGAGATCCGCGAGGCGGTGCTCTCTTTGGGGATCGATTATATGCAGGGTTATCTTATTGGTAAGCCGCAGCCGTTAATTGATACGCTGAATGAAATCGAACCCATTCGCGAAAGTGCCTGA", + "dna_sequence_length": 2244, + "functions": [ + "cyclic-di-GMP phosphodiesterase, anaerobic" + ], + "id": "CDS_2485", + "location": [ + [ + "NC_000913", + 2628938, + "-", + 2244 + ] + ], + "md5": "23d86ea84fcb581cde9d8bc38745b1d5", + "parent_gene": "", + "protein_md5": "8416111a4a5898e7a78c2dabd0fad02d", + "protein_translation": "MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA", + "protein_translation_length": 747, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008247" + ], + [ + "gene_synonym", + "ECK2500" + ], + [ + "gene_synonym", + "EcoGene:EG14203" + ], + [ + "gene_synonym", + "GI:16130429" + ], + [ + "gene_synonym", + "GeneID:946980" + ], + [ + "gene_synonym", + "JW5399" + ], + [ + "gene_synonym", + "NP_416999.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64545" + ], + [ + "gene_synonym", + "b2504" + ], + [ + "gene_synonym", + "yfgG" + ] + ], + "dna_sequence": "GTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTTTTATCTACTCGTCCGTCGGTGCCTGGCAGCACCATCAGAGCAAAAAAGAAGCTCAGCAATCCACACTCTCCGTCGAATCACCGGTACAACGTTAG", + "dna_sequence_length": 192, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2486", + "location": [ + [ + "NC_000913", + 2629290, + "+", + 192 + ] + ], + "md5": "ba8316daa1e8bd99bd0ad5e11436e92d", + "parent_gene": "", + "protein_md5": "02fa36f50e6ee42957a7e95144390f9a", + "protein_translation": "MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESPVQR", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008250" + ], + [ + "gene_synonym", + "ECK2501" + ], + [ + "gene_synonym", + "EcoGene:EG14204" + ], + [ + "gene_synonym", + "GI:16130430" + ], + [ + "gene_synonym", + "GeneID:945709" + ], + [ + "gene_synonym", + "JW5400" + ], + [ + "gene_synonym", + "NP_417000.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65290" + ], + [ + "gene_synonym", + "b2505" + ], + [ + "gene_synonym", + "yfgH" + ] + ], + "dna_sequence": "GTGATGAAATTTAAAAAATGTCTTCTGCCTGTGGCAATGTTAGCGTCATTCACTCTGGCAGGATGCCAGTCAAATGCTGACGATCATGCTGCCGATGTTTATCAAACCGATCAACTGAATACCAAACAAGAAACTAAAACCGTTAATATTATTTCCATTCTTCCCGCAAAAGTTGCCGTAGACAACTCCCAAAATAAACGGAACGCACAAGCCTTCGGCGCGCTTATTGGCGCAGTCGCTGGCGGTGTTATCGGCCACAACGTCGGGTCTGGCAGCAATTCCGGAACGACGGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGTGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAA", + "dna_sequence_length": 519, + "functions": [ + "outer membrane integrity lipoprotein" + ], + "id": "CDS_2487", + "location": [ + [ + "NC_000913", + 2629792, + "+", + 519 + ] + ], + "md5": "f36909bcde30fd614b5bc9ba1fe50fc0", + "parent_gene": "", + "protein_md5": "ad882ab50de399dcd65ae25e7885da76", + "protein_translation": "MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQETKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008252" + ], + [ + "gene_synonym", + "ECK2502" + ], + [ + "gene_synonym", + "EcoGene:EG14205" + ], + [ + "gene_synonym", + "GI:16130431" + ], + [ + "gene_synonym", + "GeneID:945168" + ], + [ + "gene_synonym", + "JW2490" + ], + [ + "gene_synonym", + "NP_417001.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76573" + ], + [ + "gene_synonym", + "b2506" + ], + [ + "gene_synonym", + "yfgI" + ] + ], + "dna_sequence": "ATGAAGAAAGTTTTTCTTTGCGCCATCTTAGCCTCCTTAAGCTATCCGGCTATCGCCTCATCATTGCAGGATCAACTCTCTGCTGTCGCAGAAGCGGAACAGCAAGGTAAAAATGAAGAGCAAAGGCAGCATGACGAATGGGTCGCGGAGCGCAACAGGGAAATCCAGCAAGAGAAGCAACGTCGCGCAAATGCCCAGGCCGCCGCTAACAAAAGAGCGGCAACGGCAGCGGCAAATAAGAAAGCTCGTCAGGATAAACTGGACGCCGAAGCCTCTGCGGACAAAAAACGCGATCAAAGTTATGAAGATGAGCTACGCAGCTTAGAGATTCAGAAACAAAAACTGGCGCTGGCGAAAGAAGAAGCCCGCGTTAAGCGAGAAAACGAATTTATCGATCAGGAACTGAAGCACAAAGCTGCGCAAACCGATGTGGTGCAATCTGAAGCTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAA", + "dna_sequence_length": 540, + "functions": [ + "nalidixic acid resistance protein, putative periplasmic protein" + ], + "id": "CDS_2488", + "location": [ + [ + "NC_000913", + 2630326, + "+", + 540 + ] + ], + "md5": "f971a87a2c127c45a8943f7201a857a9", + "parent_gene": "", + "protein_md5": "5ad11b8dd15ac87a21bcfaf34df828d2", + "protein_translation": "MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYEDELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008254" + ], + [ + "gene_synonym", + "ECK2503" + ], + [ + "gene_synonym", + "EcoGene:EG10420" + ], + [ + "gene_synonym", + "GI:16130432" + ], + [ + "gene_synonym", + "GeneID:947334" + ], + [ + "gene_synonym", + "JW2491" + ], + [ + "gene_synonym", + "NP_417002.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04079" + ], + [ + "gene_synonym", + "b2507" + ], + [ + "gene_synonym", + "guaA" + ] + ], + "dna_sequence": "ATGACGGAAAACATTCATAAGCATCGCATCCTCATTCTGGACTTCGGTTCTCAGTACACTCAACTGGTTGCGCGCCGCGTGCGTGAGCTGGGTGTTTACTGCGAACTGTGGGCGTGGGATGTGACAGAAGCACAAATTCGTGACTTCAATCCAAGCGGCATTATTCTTTCCGGCGGCCCGGAAAGTACTACTGAAGAAAACAGTCCGCGTGCGCCGCAGTATGTCTTTGAAGCAGGCGTACCGGTATTCGGCGTTTGCTATGGCATGCAGACCATGGCAATGCAGTTGGGCGGTCACGTTGAAGCCTCTAACGAACGTGAATTTGGCTACGCGCAGGTTGAAGTCGTAAACGACAGCGCACTGGTTCGCGGTATCGAAGATGCGCTGACCGCAGACGGTAAACCGCTGCTCGATGTCTGGATGAGCCACGGCGATAAAGTTACCGCTATTCCGTCCGACTTCATCACCGTAGCCAGCACCGAAAGCTGCCCGTTTGCCATTATGGCTAACGAAGAAAAACGCTTCTATGGCGTACAGTTCCACCCGGAAGTGACTCATACCCGCCAGGGTATGCGCATGCTGGAGCGTTTTGTGCGTGATATCTGCCAGTGTGAAGCCCTGTGGACGCCAGCGAAAATTATCGACGATGCTGTAGCTCGCATCCGCGAGCAGGTAGGCGACGATAAAGTCATCCTCGGCCTCTCTGGTGGTGTGGATTCCTCCGTAACCGCAATGCTGCTGCACCGCGCTATCGGTAAAAACCTGACTTGCGTATTCGTCGACAACGGCCTGCTGCGCCTCAACGAAGCAGAGCAGGTTCTGGATATGTTTGGCGATCACTTTGGTCTTAACATTGTTCACGTACCGGCAGAAGATCGCTTCCTGTCAGCGCTGGCTGGCGAAAACGATCCGGAAGCAAAACGTAAAATCATCGGTCGCGTTTTCGTTGAAGTATTCGATGAAGAAGCGCTGAAACTGGAAGACGTGAAGTGGCTGGCGCAGGGCACCATCTACCCTGACGTTATCGAATCTGCGGCGTCTGCAACCGGTAAAGCACACGTCATCAAATCTCACCACAACGTGGGCGGCCTGCCGAAAGAGATGAAGATGGGCCTGGTTGAACCGCTGAAAGAGCTGTTCAAAGACGAAGTGCGTAAGATTGGTCTGGAGCTGGGCCTGCCGTACGACATGCTGTACCGTCACCCGTTCCCGGGACCAGGCCTTGGCGTTCGTGTTCTGGGTGAAGTGAAGAAAGAGTACTGTGACCTGCTGCGCCGTGCTGACGCCATCTTCATTGAAGAACTGCGTAAAGCGGACCTGTACGACAAAGTCAGCCAGGCGTTCACTGTGTTCCTGCCGGTACGTTCCGTTGGCGTAATGGGCGATGGTCGTAAGTATGACTGGGTTGTCTCTCTGCGTGCTGTCGAAACCATCGACTTTATGACCGCACACTGGGCGCATCTGCCGTACGATTTCCTCGGTCGCGTTTCCAACCGCATTATCAATGAAGTGAACGGTATTTCCCGCGTGGTGTATGACATCAGCGGCAAGCCGCCAGCTACCATTGAGTGGGAATGA", + "dna_sequence_length": 1578, + "functions": [ + "GMP synthetase (glutamine aminotransferase)" + ], + "id": "CDS_2489", + "location": [ + [ + "NC_000913", + 2632535, + "-", + 1578 + ] + ], + "md5": "885e0e88a93d3a2ad6eb790370c48e55", + "parent_gene": "", + "protein_md5": "694c6f10097223dd7c1fd8859599cbca", + "protein_translation": "MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE", + "protein_translation_length": 525, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008257" + ], + [ + "gene_synonym", + "ECK2504" + ], + [ + "gene_synonym", + "EcoGene:EG10421" + ], + [ + "gene_synonym", + "GI:16130433" + ], + [ + "gene_synonym", + "GeneID:946985" + ], + [ + "gene_synonym", + "JW5401" + ], + [ + "gene_synonym", + "NP_417003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADG7" + ], + [ + "gene_synonym", + "b2508" + ], + [ + "gene_synonym", + "guaB" + ], + [ + "gene_synonym", + "guaR" + ] + ], + "dna_sequence": "ATGCTACGTATCGCTAAAGAAGCTCTGACGTTTGACGACGTTCTCCTCGTTCCTGCTCACTCTACCGTTCTGCCGAATACTGCTGACCTCAGCACCCAGCTGACGAAAACTATTCGTCTGAATATCCCTATGCTTTCCGCAGCAATGGATACCGTAACGGAAGCGCGCCTGGCTATTGCTCTGGCTCAGGAAGGCGGTATCGGCTTTATCCACAAAAACATGTCCATTGAACGCCAGGCAGAAGAAGTTCGCCGTGTGAAAAAACACGAATCTGGTGTGGTGACTGATCCGCAGACTGTTCTGCCAACCACGACGCTGCGCGAAGTGAAAGAACTGACCGAGCGTAACGGTTTTGCGGGCTATCCGGTCGTTACCGAAGAAAACGAACTGGTGGGTATTATCACCGGTCGTGACGTGCGTTTTGTTACCGACCTGAACCAGCCGGTTAGCGTTTACATGACGCCGAAAGAGCGTCTGGTCACCGTGCGTGAAGGTGAAGCCCGTGAAGTGGTGCTGGCAAAAATGCACGAAAAACGCGTTGAAAAAGCGCTGGTGGTTGATGACGAATTCCACCTGATCGGCATGATCACCGTGAAAGACTTCCAGAAAGCGGAACGTAAACCGAACGCCTGTAAAGACGAGCAAGGCCGTCTGCGTGTTGGTGCAGCGGTTGGCGCAGGTGCGGGTAACGAAGAGCGTGTTGACGCGCTGGTTGCCGCAGGCGTTGACGTTCTGCTGATCGACTCCTCCCACGGTCACTCAGAAGGTGTACTGCAACGTATCCGTGAAACCCGTGCTAAATATCCGGATCTGCAAATTATCGGCGGCAACGTGGCAACAGCTGCAGGTGCACGCGCTCTGGCAGAAGCTGGTTGCAGTGCGGTTAAAGTCGGCATTGGCCCTGGCTCTATCTGTACAACTCGTATCGTGACTGGCGTCGGTGTTCCGCAGATTACCGCTGTTGCTGACGCAGTAGAAGCCCTGGAAGGCACCGGTATTCCGGTTATCGCTGATGGCGGTATTCGCTTCTCCGGCGACATCGCCAAAGCTATCGCCGCTGGCGCAAGCGCGGTGATGGTAGGTTCCATGCTGGCGGGTACTGAAGAATCTCCGGGTGAAATCGAACTCTACCAGGGCCGTTCTTACAAATCTTACCGTGGTATGGGTTCCCTGGGCGCGATGTCCAAAGGTTCCTCTGACCGTTATTTCCAGAGCGATAACGCTGCCGACAAACTGGTGCCGGAAGGTATCGAAGGTCGCGTAGCCTATAAAGGTCGCCTGAAAGAGATCATTCACCAGCAGATGGGCGGCCTGCGCTCCTGTATGGGTCTGACCGGCTGTGGTACTATCGACGAACTGCGTACTAAAGCGGAGTTTGTACGTATCAGCGGTGCGGGCATTCAGGAAAGCCACGTTCACGACGTGACCATTACTAAAGAGTCCCCGAACTACCGTCTGGGCTCCTGA", + "dna_sequence_length": 1467, + "functions": [ + "IMP dehydrogenase" + ], + "id": "CDS_2490", + "location": [ + [ + "NC_000913", + 2634070, + "-", + 1467 + ] + ], + "md5": "bf7c92f98cfd72f48fc356e07d388b1c", + "parent_gene": "", + "protein_md5": "116bddd68b8f96de06d9da6d574d1a85", + "protein_translation": "MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS", + "protein_translation_length": 488, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008263" + ], + [ + "gene_synonym", + "ECK2505" + ], + [ + "gene_synonym", + "EcoGene:EG11072" + ], + [ + "gene_synonym", + "GI:16130434" + ], + [ + "gene_synonym", + "GeneID:946988" + ], + [ + "gene_synonym", + "JW2493" + ], + [ + "gene_synonym", + "NP_417004.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04994" + ], + [ + "gene_synonym", + "b2509" + ], + [ + "gene_synonym", + "xse" + ], + [ + "gene_synonym", + "xseA" + ] + ], + "dna_sequence": "ATGTTACCTTCTCAATCCCCTGCAATTTTTACCGTTAGTCGCCTGAATCAAACGGTTCGTCTGCTGCTTGAGCATGAGATGGGACAGGTTTGGATCAGCGGCGAAATTTCTAATTTCACGCAACCAGCTTCCGGTCACTGGTACTTTACACTCAAAGACGACACCGCCCAGGTACGCTGCGCGATGTTCCGCAACAGCAACCGCCGGGTGACCTTCCGCCCACAGCATGGGCAACAAGTTTTAGTTCGCGCCAATATTACGCTCTACGAGCCGCGCGGCGACTACCAGATAATCGTTGAGAGTATGCAGCCGGCCGGTGAAGGGCTGCTGCAACAGAAGTACGAACAGCTCAAAGCGAAGTTGCAGGCTGAAGGTTTGTTCGATCAGCAATACAAAAAACCACTTCCCTCCCCTGCGCATTGCGTTGGTGTGATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATGAGACGGATGTGACCATTGCCGATTTTGTTGCCGATCTGCGTGCGCCAACGCCGTCTGCCGCCGCTGAAGTAGTGAGCCGTAATCAGCAAGAGTTACTGCGCCAGGTGCAATCGACCCGTCAACGGCTGGAGATGGCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAGCGCCACGCGTGAACGTTTCGGTAATGCAGTAACGCACCTCGAAGCCGTAAGCCCACTGTCAACGCTGGCGCGTGGATACAGCGTTACTACTGCTACTGACGGCAATGTACTGAAAAAAGTGAAGCAAGTTAAAGCGGGTGAAATGCTAACCACACGTCTGGAAGACGGCTGGATAGAAAGTGAAGTAAAAAACATCCAGCCAGTAAAAAAATCGCGTAAAAAGGTGCATTAA", + "dna_sequence_length": 1371, + "functions": [ + "exonuclease VII, large subunit" + ], + "id": "CDS_2491", + "location": [ + [ + "NC_000913", + 2634232, + "+", + 1371 + ] + ], + "md5": "62a07ef17298066dd5c93b2539dba1ad", + "parent_gene": "", + "protein_md5": "580de5d36d3d318676bc70348654eab1", + "protein_translation": "MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH", + "protein_translation_length": 456, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008266" + ], + [ + "gene_synonym", + "ECK2506" + ], + [ + "gene_synonym", + "EcoGene:EG14206" + ], + [ + "gene_synonym", + "GI:90111449" + ], + [ + "gene_synonym", + "GeneID:946984" + ], + [ + "gene_synonym", + "JW5402" + ], + [ + "gene_synonym", + "NP_417005.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76575" + ], + [ + "gene_synonym", + "b2510" + ], + [ + "gene_synonym", + "yfgJ" + ] + ], + "dna_sequence": "ATGGAACTGCATTGTCCACAATGTCAGCATGTGCTTGATCAGGATAACGGCCATGCGCGTTGCCGATCCTGCGGGGAATTTATTGAAATGAAAGCTCTTTGTCCAGACTGCCATCAACCGTTGCAGGTGTTAAAAGCCTGTGGTGCAGTAGATTACTTCTGTCAGCACGGGCATGGCTTGATATCGAAAAAACGCGTTGAATTCGTGCTGGCTTAA", + "dna_sequence_length": 216, + "functions": [ + "DUF1407 family protein" + ], + "id": "CDS_2492", + "location": [ + [ + "NC_000913", + 2635814, + "-", + 216 + ] + ], + "md5": "35a914cef9a052503514eeccd1c7a047", + "parent_gene": "", + "protein_md5": "e4e55dc6a13010f0dbb6e3696e88e31e", + "protein_translation": "MELHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008270" + ], + [ + "gene_synonym", + "ECK2507" + ], + [ + "gene_synonym", + "EcoGene:EG14207" + ], + [ + "gene_synonym", + "GI:90111450" + ], + [ + "gene_synonym", + "GeneID:946983" + ], + [ + "gene_synonym", + "JW5403" + ], + [ + "gene_synonym", + "NP_417006.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6P5" + ], + [ + "gene_synonym", + "b2511" + ], + [ + "gene_synonym", + "der" + ], + [ + "gene_synonym", + "engA" + ], + [ + "gene_synonym", + "yfgK" + ] + ], + "dna_sequence": "ATGGTACCTGTGGTCGCGCTTGTCGGGCGCCCTAACGTAGGAAAATCCACGTTATTTAACCGTCTAACTCGCACCCGAGATGCGCTGGTTGCGGATTTCCCGGGTCTGACTCGTGACCGTAAGTACGGTCGTGCGGAAATTGAAGGCCGTGAGTTTATCTGTATTGATACCGGCGGGATTGATGGCACAGAAGACGGTGTAGAAACCCGCATGGCGGAACAGTCGCTGCTGGCGATTGAAGAAGCGGACGTCGTACTGTTTATGGTGGATGCGCGCGCGGGCCTGATGCCGGCAGATGAAGCGATTGCCAAACATCTGCGCTCCCGTGAAAAACCGACCTTCCTGGTGGCAAACAAAACTGACGGTCTGGATCCCGATCAGGCAGTGGTTGATTTCTACTCGCTTGGTTTAGGTGAAATCTACCCGATCGCCGCGTCTCACGGTCGTGGCGTATTAAGTCTGCTGGAGCATGTGCTGCTGCCGTGGATGGAAGATCTCGCACCGCAAGAGGAAGTCGACGAAGACGCTGAATACTGGGCGCAATTTGAAGCGGAAGAGAACGGCGAAGAAGAAGAGGAAGACGACTTCGACCCGCAAAGTCTGCCGATCAAACTGGCGATTGTGGGTCGTCCGAACGTAGGTAAGTCTACACTCACTAACCGTATTCTTGGTGAAGAGCGCGTTGTTGTTTACGACATGCCTGGCACGACGCGTGACAGCATCTACATCCCAATGGAACGCGATGGACGTGAGTATGTGCTCATTGACACCGCTGGCGTACGTAAACGCGGCAAAATCACCGATGCTGTAGAGAAATTCTCCGTAATCAAAACGTTGCAGGCCATTGAAGACGCCAACGTGGTGATGTTAGTGATTGATGCGCGCGAAGGTATTTCCGATCAGGATCTCTCGCTGCTGGGCTTTATTCTCAATAGTGGGCGCTCACTTGTCATTGTGGTGAATAAGTGGGATGGCCTGAGTCAGGAAGTGAAAGAGCAGGTGAAAGAAACGCTGGACTTCCGTCTGGGCTTTATCGATTTTGCTCGTGTGCACTTTATCTCTGCCTTGCACGGCAGTGGTGTTGGTAACTTGTTTGAATCAGTACGTGAAGCGTATGACAGCTCCACCCGTCGTGTGGGGACCTCTATGCTGACGCGCATCATGACGATGGCTGTTGAAGATCACCAACCGCCGCTGGTACGCGGTCGTCGTGTGAAGCTGAAATATGCCCACGCCGGTGGTTATAACCCGCCGATTGTGGTGATTCACGGTAATCAGGTGAAAGACCTGCCTGATTCCTACAAGCGCTACTTGATGAACTACTTCCGCAAATCGCTGGACGTAATGGGATCGCCGATTCGTATTCAGTTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAA", + "dna_sequence_length": 1473, + "functions": [ + "GTPase", + "multicopy suppressor of ftsJ" + ], + "id": "CDS_2493", + "location": [ + [ + "NC_000913", + 2637356, + "-", + 1473 + ] + ], + "md5": "a2072f521446cf5534c5dc641691f161", + "parent_gene": "", + "protein_md5": "91ef54ffa17e6a062f64b916b7f842ac", + "protein_translation": "MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK", + "protein_translation_length": 490, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008272" + ], + [ + "gene_synonym", + "ECK2508" + ], + [ + "gene_synonym", + "EcoGene:EG14208" + ], + [ + "gene_synonym", + "GI:16130437" + ], + [ + "gene_synonym", + "GeneID:946982" + ], + [ + "gene_synonym", + "JW2496" + ], + [ + "gene_synonym", + "NP_417007.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77774" + ], + [ + "gene_synonym", + "b2512" + ], + [ + "gene_synonym", + "bamB" + ], + [ + "gene_synonym", + "yfgL" + ] + ], + "dna_sequence": "ATGCAATTGCGTAAATTACTGCTGCCAGGACTGCTTTCCGTTACCCTTTTAAGCGGCTGTTCGCTGTTTAACAGCGAAGAAGATGTGGTAAAGATGTCCCCATTGCCAACCGTTGAAAACCAGTTTACGCCGACCACGGCGTGGAGCACTTCCGTTGGTAGCGGCATTGGCAACTTCTATTCCAATCTTCATCCGGCACTGGCGGACAACGTTGTCTATGCAGCGGACCGCGCTGGTTTAGTAAAAGCGCTGAATGCGGATGATGGCAAAGAAATCTGGTCTGTCAGCCTGGCCGAGAAAGATGGCTGGTTCTCTAAAGAGCCTGCATTACTTTCTGGCGGTGTGACCGTGTCTGGTGGGCATGTCTACATTGGCAGCGAAAAGGCGCAGGTTTACGCGCTGAATACCAGCGATGGTACTGTGGCATGGCAAACTAAAGTCGCGGGTGAAGCACTTTCGCGCCCGGTGGTCAGCGACGGTCTGGTGTTAATCCACACCAGTAACGGTCAGTTACAAGCGCTGAACGAAGCTGACGGCGCTGTCAAATGGACAGTTAACCTCGATATGCCTTCGCTCTCTTTGCGTGGCGAGTCTGCGCCGACAACGGCTTTTGGTGCGGCCGTCGTGGGGGGCGATAATGGTCGCGTCAGCGCAGTGCTGATGGAACAGGGCCAGATGATTTGGCAGCAGCGTATTTCCCAGGCGACCGGTTCTACCGAAATTGACCGTCTGAGCGATGTTGACACGACTCCCGTCGTTGTTAACGGCGTTGTTTTCGCGCTGGCCTATAATGGTAACCTGACGGCGCTTGATCTGCGCAGTGGTCAGATTATGTGGAAACGCGAACTGGGTTCGGTGAATGATTTCATCGTCGACGGCAATCGCATCTATCTGGTCGATCAAAATGACCGGGTGATGGCGTTGACCATTGATGGCGGCGTTACGCTGTGGACACAAAGCGATCTGCTGCATCGCCTGCTGACTTCTCCGGTGCTGTATAATGGCAACCTGGTGGTCGGTGACAGTGAAGGTTATCTGCACTGGATTAACGTCGAAGATGGTCGTTTCGTTGCCCAGCAAAAAGTTGATAGTTCCGGTTTCCAGACTGAACCGGTTGCCGCTGACGGCAAACTGCTGATCCAGGCAAAAGACGGAACCGTGTACTCTATTACACGTTAA", + "dna_sequence_length": 1179, + "functions": [ + "BamABCDE complex OM biogenesis lipoprotein" + ], + "id": "CDS_2494", + "location": [ + [ + "NC_000913", + 2638652, + "-", + 1179 + ] + ], + "md5": "b53788ec5c24e7ab9b8119932a9dcfdc", + "parent_gene": "", + "protein_md5": "6837898a7c2629891f67bd0ac6baa6ce", + "protein_translation": "MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008274" + ], + [ + "gene_synonym", + "ECK2509" + ], + [ + "gene_synonym", + "EcoGene:EG14209" + ], + [ + "gene_synonym", + "GI:16130438" + ], + [ + "gene_synonym", + "GeneID:946981" + ], + [ + "gene_synonym", + "JW2497" + ], + [ + "gene_synonym", + "NP_417008.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76576" + ], + [ + "gene_synonym", + "b2513" + ], + [ + "gene_synonym", + "yfgM" + ] + ], + "dna_sequence": "GTGGAAATTTACGAGAACGAAAACGACCAGGTAGAAGCGGTTAAACGCTTTTTTGCTGAAAATGGCAAAGCACTGGCTGTTGGGGTGATTTTGGGCGTTGGCGCACTGATTGGCTGGCGCTACTGGAACAGCCATCAGGTTGATTCTGCACGCTCCGCTTCTCTTGCCTATCAAAATGCGGTTACCGCAGTGAGCGAAGGCAAACCGGATAGCATCCCGGCGGCGGAAAAATTTGCTGCTGAAAATAAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGACACGAGCGATGAAAATCTCAAAGCCGTGATAAATCTGCGTCTTGCTCGCGTTCAGGTACAGCTCAAGCAGGCTGATGCCGCGCTGAAAACCCTTGATACCATCAAAGGTGAAGGGTGGGCTGCCATTGTTGCCGACCTGCGTGGTGAAGCATTGCTGAGCAAAGGTGATAAGCAAGGTGCGCGTAGTGCATGGGAAGCAGGCGTGAAAAGCGATGTTACTCCGGCACTGAGCGAAATGATGCAGATGAAAATTAATAATTTGTCCATCTGA", + "dna_sequence_length": 621, + "functions": [ + "ancillary SecYEG translocon subunit", + "putative anti-RcsB factor" + ], + "id": "CDS_2495", + "location": [ + [ + "NC_000913", + 2639283, + "-", + 621 + ] + ], + "md5": "e29d57bd63282fb6d0b8b6470e502e59", + "parent_gene": "", + "protein_md5": "7be0ae53022bd373b7732ea7c0a31e64", + "protein_translation": "MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008278" + ], + [ + "gene_synonym", + "ECK2510" + ], + [ + "gene_synonym", + "EcoGene:EG10453" + ], + [ + "gene_synonym", + "GI:16130439" + ], + [ + "gene_synonym", + "GeneID:946989" + ], + [ + "gene_synonym", + "JW2498" + ], + [ + "gene_synonym", + "NP_417009.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60906" + ], + [ + "gene_synonym", + "b2514" + ], + [ + "gene_synonym", + "hisS" + ] + ], + "dna_sequence": "GTGGCAAAAAACATTCAAGCCATTCGCGGCATGAACGATTACCTGCCTGGCGAAACGGCCATCTGGCAGCGCATTGAAGGCACACTGAAAAACGTGCTCGGCAGCTACGGTTACAGTGAAATCCGCTTGCCGATTGTAGAGCAGACCCCGCTATTCAAACGTGCGATTGGTGAAGTCACCGACGTGGTTGAAAAAGAGATGTACACCTTTGAGGATCGCAATGGCGACAGCCTGACTCTGCGCCCTGAAGGGACGGCGGGCTGTGTACGCGCCGGCATCGAGCATGGTCTTCTGTACAATCAGGAACAGCGTCTGTGGTATATCGGGCCGATGTTCCGTCACGAGCGTCCGCAGAAAGGGCGTTATCGTCAGTTCCATCAGTTGGGCTGCGAAGTTTTCGGTCTGCAAGGTCCGGATATCGACGCTGAACTGATTATGCTCACTGCCCGCTGGTGGCGCGCGCTGGGTATTTCCGAGCACGTAACTCTTGAGCTGAACTCTATCGGTTCGCTGGAAGCACGCGCCAATTACCGCGATGCGCTGGTGGCATTCCTTGAGCAGCATAAAGAAAAGCTGGACGAAGACTGCAAACGCCGCATGTACACTAACCCGCTGCGCGTGCTGGATTCAAAAAATCCGGAAGTGCAGGCGCTTCTCAACGACGCTCCGGCATTAGGTGACTATCTGGACGAGGAATCTCGTGAGCATTTTGCCGGTCTGTGCAAACTGCTGGAGAGCGCGGGGATCGCTTACACCGTAAACCAGCGTCTGGTGCGTGGTCTGGATTACTACAACCGTACCGTTTTCGAGTGGGTGACTAACAGTCTCGGCTCCCAGGGCACCGTGTGTGCAGGCGGTCGTTATGACGGTCTTGTGGAACAACTGGGCGGTCGTGCAACACCGGCTGTCGGTTTTGCTATGGGCCTCGAACGTCTTGTATTGTTAGTACAGGCCGTTAATCCGGAATTTAAAGCCGATCCTGTTGTCGATATATACCTGGTGGCTTCAGGTGCTGATACACAATCTGCGGCTATGGCATTAGCTGAGCGTCTGCGTGATGAATTACCGGGCGTGAAATTGATGACCAACCACGGCGGCGGCAACTTTAAGAAACAGTTTGCCCGTGCTGATAAATGGGGTGCCCGCGTTGCTGTGGTGCTGGGTGAGTCTGAAGTGGCTAACGGCACAGCAGTAGTGAAGGATTTGCGCTCTGGTGAGCAAACGGCAGTTGCGCAGGATAGCGTAGCCGCGCATTTGCGCACGTTACTGGGTTAA", + "dna_sequence_length": 1275, + "functions": [ + "histidyl tRNA synthetase" + ], + "id": "CDS_2496", + "location": [ + [ + "NC_000913", + 2640575, + "-", + 1275 + ] + ], + "md5": "86ac3f5da65f7bc4fd3e9f5a0f34bd1e", + "parent_gene": "", + "protein_md5": "38ca34b1ed3568ea58cb6d66102b10c6", + "protein_translation": "MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG", + "protein_translation_length": 424, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008281" + ], + [ + "gene_synonym", + "ECK2511" + ], + [ + "gene_synonym", + "EcoGene:EG10370" + ], + [ + "gene_synonym", + "GI:16130440" + ], + [ + "gene_synonym", + "GeneID:946991" + ], + [ + "gene_synonym", + "JW2499" + ], + [ + "gene_synonym", + "NP_417010.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62620" + ], + [ + "gene_synonym", + "b2515" + ], + [ + "gene_synonym", + "gcpE" + ], + [ + "gene_synonym", + "ispG" + ] + ], + "dna_sequence": "ATGCATAACCAGGCTCCAATTCAACGTAGAAAATCAACACGTATTTACGTTGGGAATGTGCCGATTGGCGATGGTGCTCCCATCGCCGTACAGTCCATGACCAATACGCGTACGACAGACGTCGAAGCAACGGTCAATCAAATCAAGGCGCTGGAACGCGTTGGCGCTGATATCGTCCGTGTATCCGTACCGACGATGGACGCGGCAGAAGCGTTCAAACTCATCAAACAGCAGGTTAACGTGCCGCTGGTGGCTGACATCCACTTCGACTATCGCATTGCGCTGAAAGTAGCGGAATACGGCGTCGATTGTCTGCGTATTAACCCTGGCAATATCGGTAATGAAGAGCGTATTCGCATGGTGGTTGACTGTGCGCGCGATAAAAACATTCCGATCCGTATTGGCGTTAACGCCGGATCGCTGGAAAAAGATCTGCAAGAAAAGTATGGCGAACCGACGCCGCAGGCGTTGCTGGAATCTGCCATGCGTCATGTTGATCATCTCGATCGCCTGAACTTCGATCAGTTCAAAGTCAGCGTGAAAGCGTCTGACGTCTTCCTCGCTGTTGAGTCTTATCGTTTGCTGGCAAAACAGATCGATCAGCCGTTGCATCTGGGGATCACCGAAGCCGGTGGTGCGCGCAGCGGGGCAGTAAAATCCGCCATTGGTTTAGGTCTGCTGCTGTCTGAAGGCATCGGCGACACGCTGCGCGTATCGCTGGCGGCCGATCCGGTCGAAGAGATCAAAGTCGGTTTCGATATTTTGAAATCGCTGCGTATCCGTTCGCGAGGGATCAACTTCATCGCCTGCCCGACCTGTTCGCGTCAGGAATTTGATGTTATCGGTACGGTTAACGCGCTGGAGCAACGCCTGGAAGATATCATCACTCCGATGGACGTTTCGATTATCGGCTGCGTGGTGAATGGCCCAGGTGAGGCGCTGGTTTCTACACTCGGCGTCACCGGCGGCAACAAGAAAAGCGGCCTCTATGAAGATGGCGTGCGCAAAGACCGTCTGGACAACAACGATATGATCGACCAGCTGGAAGCACGCATTCGTGCGAAAGCCAGTCAGCTGGACGAAGCGCGTCGAATTGACGTTCAGCAGGTTGAAAAATAA", + "dna_sequence_length": 1119, + "functions": [ + "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase" + ], + "id": "CDS_2497", + "location": [ + [ + "NC_000913", + 2641804, + "-", + 1119 + ] + ], + "md5": "768380c616e273539ffd9d98f74212b3", + "parent_gene": "", + "protein_md5": "8fdfc5b772bb357d9e57c9710e060f7e", + "protein_translation": "MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008283" + ], + [ + "gene_synonym", + "ECK2512" + ], + [ + "gene_synonym", + "EcoGene:EG10015" + ], + [ + "gene_synonym", + "GI:16130441" + ], + [ + "gene_synonym", + "GeneID:946992" + ], + [ + "gene_synonym", + "JW2500" + ], + [ + "gene_synonym", + "NP_417011.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27434" + ], + [ + "gene_synonym", + "b2516" + ], + [ + "gene_synonym", + "rodZ" + ], + [ + "gene_synonym", + "yfgA" + ] + ], + "dna_sequence": "ATGAATACTGAAGCCACGCACGACCAAAATGAAGCACTTACTACCGGCGCTCGCCTGCGTAATGCTCGCGAACAACTAGGACTTAGTCAGCAGGCCGTTGCCGAGCGACTTTGCCTGAAGGTTTCCACGGTACGCGACATTGAAGAAGATAAGGCACCCGCCGATCTTGCTTCAACATTCCTGCGCGGATATATCCGCTCTTATGCGCGTCTGGTACATATTCCAGAAGAAGAACTGCTGCCAGGGCTGGAAAAGCAGGCTCCACTTCGGGCTGCAAAAGTTGCGCCGATGCAGAGTTTTTCCCTCGGTAAACGCCGCAAAAAACGCGACGGCTGGCTGATGACCTTCACTTGGCTGGTGTTGTTTGTGGTTATCGGCCTGAGCGGTGCCTGGTGGTGGCAAGACCGCAAAGCTCAGCAGGAAGAGATCACCACTATGGCCGATCAATCTTCGGCGGAACTGAGCAGTAATAGCGAGCAGGGGCAGAGTGTTCCATTAAATACGTCGACAACTACAGACCCGGCTACAACGTCCACGCCGCCAGCGTCTGTGGATACTACCGCAACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGCCAACCGATCAGGCTGGCGTGACCACGCCGGTGGCTGATCCGAATGCGCTGGTGATGAACTTTACTGCCGATTGCTGGCTGGAGGTCACTGATGCTACCGGTAAAAAATTGTTTAGCGGTATGCAGCGTAAAGACGGTAATTTGAACTTAACCGGCCAGGCACCGTACAAACTGAAAATTGGTGCGCCAGCCGCAGTACAGATCCAGTATCAAGGGAAACCTGTCGATCTGAGTCGTTTTATCAGAACTAACCAGGTTGCGCGTCTGACCCTCAATGCCGAACAATCACCGGCGCAGTAA", + "dna_sequence_length": 1014, + "functions": [ + "MreB assembly cytoskeletal protein" + ], + "id": "CDS_2498", + "location": [ + [ + "NC_000913", + 2642844, + "-", + 1014 + ] + ], + "md5": "3dc3c82f5ae639f32ab96786c3d6536a", + "parent_gene": "", + "protein_md5": "b3ca4aeb5ffb2a35824bb6b9369f8a0c", + "protein_translation": "MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008287" + ], + [ + "gene_synonym", + "ECK2513" + ], + [ + "gene_synonym", + "EcoGene:EG12401" + ], + [ + "gene_synonym", + "GI:16130442" + ], + [ + "gene_synonym", + "GeneID:946249" + ], + [ + "gene_synonym", + "JW2501" + ], + [ + "gene_synonym", + "NP_417012.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36979" + ], + [ + "gene_synonym", + "b2517" + ], + [ + "gene_synonym", + "rlmN" + ], + [ + "gene_synonym", + "yfgB" + ] + ], + "dna_sequence": "ATGTCTGAACAATTAGTCACACCTGAAAACGTCACCACGAAAGATGGAAAAATCAACCTGCTGGATCTCAACCGTCAGCAGATGCGGGAGTTTTTTAAAGATTTAGGTGAAAAACCCTTCCGCGCCGATCAGGTGATGAAGTGGATGTATCACTATTGCTGCGACAACTTTGATGAGATGACCGACATCAACAAAGTGTTGCGCGGCAAACTGAAAGAGGTGGCGGAAATCCGCGCACCGGAAGTGGTTGAAGAACAGCGTTCATCTGACGGCACCATTAAATGGGCGATCGCCGTTGGCGATCAGCGCGTCGAAACGGTGTATATCCCGGAAGACGACCGTGCCACGCTCTGCGTCTCTTCGCAGGTGGGGTGTGCGCTGGAGTGTAAATTCTGTTCCACCGCCCAGCAGGGCTTTAACCGCAACCTGCGGGTGTCGGAAATTATCGGCCAGGTGTGGCGTGCGGCGAAAATCGTCGGCGCAGCAAAAGTCACCGGTCAGCGTCCGATCACTAACGTAGTGATGATGGGCATGGGCGAGCCGCTGCTCAACCTGAACAACGTCGTTCCGGCGATGGAAATCATGCTTGATGATTTCGGTTTTGGCCTGTCTAAACGTCGCGTCACGCTTTCCACTTCCGGTGTAGTTCCGGCGCTGGATAAACTGGGCGATATGATCGACGTTGCACTGGCAATTTCCCTGCACGCGCCGAACGACGAAATTCGTGACGAAATTGTGCCGATCAACAAAAAGTACAATATCGAAACGTTCCTTGCTGCGGTGCGCCGTTATCTGGAGAAATCCAACGCCAATCAGGGCCGAGTCACTATTGAATACGTGATGCTTGACCACGTTAACGACGGCACTGAACACGCGCACCAACTGGCGGAACTGCTGAAAGATACGCCGTGTAAGATCAACCTGATCCCGTGGAACCCGTTCCCGGGTGCGCCGTATGGACGCAGCTCGAACAGCCGTATCGACCGTTTCTCAAAAGTGCTGATGAGCTACGGTTTCACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCGACCGTACGAAACGTACCCTGCGTAAACGGATGCAGGGTGAAGCCATCGACATTAAAGCGGTCTGA", + "dna_sequence_length": 1155, + "functions": [ + "dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent" + ], + "id": "CDS_2499", + "location": [ + [ + "NC_000913", + 2644283, + "-", + 1155 + ] + ], + "md5": "e5a18e8bdb95e2d4224e92b82bbf470d", + "parent_gene": "", + "protein_md5": "1b191014a633b5c1771193980a66d6a7", + "protein_translation": "MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008291" + ], + [ + "gene_synonym", + "ECK2514" + ], + [ + "gene_synonym", + "EcoGene:EG10650" + ], + [ + "gene_synonym", + "GI:16130443" + ], + [ + "gene_synonym", + "GeneID:945611" + ], + [ + "gene_synonym", + "JW2502" + ], + [ + "gene_synonym", + "NP_417013.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A763" + ], + [ + "gene_synonym", + "b2518" + ], + [ + "gene_synonym", + "ndk" + ] + ], + "dna_sequence": "ATGGCTATTGAACGTACTTTTTCCATCATCAAACCGAACGCGGTAGCAAAAAACGTCATTGGTAATATCTTTGCGCGCTTTGAAGCTGCAGGGTTCAAAATTGTTGGCACCAAAATGCTGCACCTGACCGTTGAACAGGCACGTGGCTTTTATGCTGAACACGATGGAAAACCGTTCTTTGATGGTCTGGTTGAATTCATGACCTCTGGCCCGATCGTGGTTTCCGTGCTGGAAGGTGAAAACGCCGTTCAGCGTCACCGCGATCTGCTGGGCGCGACCAATCCGGCAAACGCACTGGCTGGTACTCTGCGCGCTGATTACGCTGACAGCCTGACCGAAAACGGTACCCACGGTTCTGATTCCGTCGAATCTGCCGCTCGCGAAATCGCTTATTTCTTTGGCGAAGGCGAAGTGTGCCCGCGCACCCGTTAA", + "dna_sequence_length": 432, + "functions": [ + "multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase" + ], + "id": "CDS_2500", + "location": [ + [ + "NC_000913", + 2644864, + "-", + 432 + ] + ], + "md5": "d0b63f3eea92cb2cbf225fa0513fd6be", + "parent_gene": "", + "protein_md5": "54fef7552ef7599096562610b89c5009", + "protein_translation": "MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR", + "protein_translation_length": 143, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008294" + ], + [ + "gene_synonym", + "ECK2515" + ], + [ + "gene_synonym", + "EcoGene:EG14210" + ], + [ + "gene_synonym", + "GI:16130444" + ], + [ + "gene_synonym", + "GeneID:947152" + ], + [ + "gene_synonym", + "JW2503" + ], + [ + "gene_synonym", + "NP_417014.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76577" + ], + [ + "gene_synonym", + "b2519" + ], + [ + "gene_synonym", + "pbpC" + ], + [ + "gene_synonym", + "yfgN" + ] + ], + "dna_sequence": "ATGCCTCGCTTGTTAACCAAACGCGGCTGCTGGATAACGTTGGCAGCCGCGCCCTTTCTCCTTTTTCTTGCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGCAGGATGGTACGCCGCTCTGGCGCTTCGCCGATGCTGACGGCATCTGGCGTTATCCGGTAACAATCGAAGATGTTTCTCCACGTTACCTTGAAGCGCTGATCAATTATGAAGATCGCTGGTTCTGGAAGCATCCGGGGGTGAATCCATTCTCGGTGGCGCGCGCAGCATGGCAAGATCTCACTTCGGGACGGGTTATTTCCGGTGGCAGCACGCTCACTATGCAGGTTGCTCGTCTGCTTGATCCTCACCCCAAAACATTTGGCGGCAAAATTCGCCAGCTCTGGCGCGCGTTGCAACTGGAATGGCATCTGTCTAAGCGTGAAATTCTGACCTTGTATCTTAACCGCGCTCCGTTTGGCGGTACGTTGCAGGGGATCGGTGCGGCAAGTTGGGCTTATCTCGGAAAATCGCCTGCGAATTTAAGCTATTCCGAGGCGGCAATGCTGGCGGTTTTGCCGCAAGCGCCCAGCCGTCTTCGCCCGGATCGTTGGCCGGAGCGTGCCGAAGCCGCGCGTAATAAAGTGCTCGAACGGATGGCCGTGCAAGGTGTGTGGTCCCGTGAGCAGGTAAAAGAGTCAAGGGAAGAACCCATCTGGCTGGCCCCCCGACAAATGCCGCAACTGGCACCGCTGTTTTCGCGCATGATGCTCGGTAAAAGCAAAAGCGACAAAATCACTACTACGTTGGATGCCGGTCTTCAACGACGTCTGGAAGAACTGGCGCAAAACTGGAAAGGGCGGTTGCCACCGCGCAGCTCACTGGCGATGATCGTGGTTGATCATACCGATATGCGTGTTCGCGGCTGGGTGGGATCGGTTGATCTCAACGATGATTCACGCTTTGGTCATGTTGATATGGTCAATTCGATCCGATCGCCAGGATCAGTGCTCAAACCGTTTGTTTATGGTCTGGCGCTGGATGAAGGCTTGATCCACCCGGCATCACTGCTGCAAGACGTCCCCCGGCGCACCGGTGATTATCGACCAGGTAACTTTGATAGCGGTTTTCATGGCCCGATCAGCATGAGCGAGGCGCTGGTGCGCTCGCTGAACTTACCTGCTGTGCAGGTGCTGGAAGCCTATGGACCGAAACGGTTTGCGGCAAAGTTACGCAATGTTGGATTGCCGTTATATTTGCCCAACGGTGCTGCGCCGAATCTTTCACTCATTCTCGGCGGCGCTGGTGCAAAACTGGAAGATATGGCGGCAGCGTATACCGCGTTTGCTCGCCACGGCAAGGCAGGCAAATTGCGCTTACAGCCTGACGATCCGCTGCTTGAACGGCCTTTAATGTCGTCGGGGGCGGCGTGGATCATTCGCCGGATTATGGCTGATGAAGCGCAACCCTTGCCGGATAGTGCCTTGCCGCGCGTCGCCCCACTGGCATGGAAAACGGGCACCAGCTATGGCTATCGTGACGCCTGGGCGATTGGGGTTAACGCTCGCTATGTCATTGGGATCTGGACTGGCAGACCGGACGGCACGCCCGTTGTTGGTCAGTTTGGCTTTGCCAGTGCCGTACCATTGTTGAATCAGGTCAATAATATCTTACTGTCGCGCAGTGCGAATCTGCCGGAAGACCCGCGCCCGAACTCAGTCACTCGTGGCGTTATCTGCTGGCCGGGCGGACAGTCTTTGCCGGAAGGTGACGGTAACTGTCGCCGCCGCCTGGCAACCTGGCTGCTGGACGGGAGTCAGCCGCCAACTCTATTACTGCCGGAGCAGGAAGGCATTAATGGCATTCGTTTCCCCATCTGGCTGGATGAAAATGGCAAACGTGTTGCCGCTGATTGCCCGCAAGCGCGACAAGAAATGATAAATGTCTGGCCGCTACCGCTGGAACCCTGGCTGCCCGCATCAGAACGTCGCGCTGTGCGCTTACCACCGGCCTCGACAAGTTGCCCGCCATACGGTCACGATGCCCAGCTCCCGCTGCAGCTGACAGGCGTTCGCGATGGCGCGATTATTAAACGTTTACCGGGCGCAGCGGAAGCGACTTTGCCGTTGCAATCAAGTGGAGGGGCAGGTGAACGCTGGTGGTTTCTGAATGGCGAACCGTTAACTGAACGCGGGCGCAACGTGACCCTGCATTTGACGGATAAAGGTGATTATCAATTGCTGGTGATGGATGACGTGGGGCAAATCGCGACAGTGAAATTTGTCATGCAATAG", + "dna_sequence_length": 2313, + "functions": [ + "penicillin-insensitive murein repair transglycosylase", + "inactive transpeptidase domain protein" + ], + "id": "CDS_2501", + "location": [ + [ + "NC_000913", + 2647325, + "-", + 2313 + ] + ], + "md5": "c65408a1841a7a5a7530c2befb60882a", + "parent_gene": "", + "protein_md5": "6fc8f588db9dc8f28cd8aa8f6e5614cd", + "protein_translation": "MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARVVVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKITTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLSRSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEGINGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCPPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ", + "protein_translation_length": 770, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008296" + ], + [ + "gene_synonym", + "ECK2516" + ], + [ + "gene_synonym", + "EcoGene:EG13394" + ], + [ + "gene_synonym", + "GI:16130445" + ], + [ + "gene_synonym", + "GeneID:947302" + ], + [ + "gene_synonym", + "JW2504" + ], + [ + "gene_synonym", + "NP_417015.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76578" + ], + [ + "gene_synonym", + "b2520" + ], + [ + "gene_synonym", + "yfhM" + ] + ], + "dna_sequence": "ATGAAAAAGTTACGCGTAGCCGCCTGCATGCTAATGCTGGCGCTGGCAGGGTGCGACAACAACGATAACGCGCCAACAGCGGTGAAAAAAGATGCGCCTTCTGAAGTTACTAAAGCGGCCTCTTCAGAAAACGCGAGTTCAGCAAAACTCTCCGTGCCGGAGAGACAAAAACTGGCCCAACAGAGTGCCGGTAAGGTGCTGACATTGCTGGATCTCTCTGAAGTCCAACTTGATGGTGCAGCCACGCTGGTGCTGACGTTCTCCATCCCTCTCGACCCGGATCAGGATTTCTCACGCGTTATTCATGTCGTCGATAAAAAAAGCGGCAAAGTGGATGGTGCCTGGGAGCTGTCAGATAATCTTAAAGAGTTACGTTTACGCCACCTCGAACCGAAACGTGATTTGATCGTTACTATTGGCAAGGAGGTCAAAGCACTCAACAACGCAACCTTCAGTAAAGATTACGAAAAAACTATAACTACCCGCGACATCCAACCCAGCGTCGGTTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCCAGAATCTCTGCCAGCATTCATTAGCCAATGGGAATACCGCAATTCGCTGGCGAACTGGCAGTCAGACAAACTGCTGCAGATGGCGGATCTGGTCTACACCGGACGGTTTGATCTCAATCCTGCGCGTAACACCCGTGAAAAATTATTGCTGCCGCTGGGCGATATCAAACCGCTTCAGCAGGCGGGCGTGTATCTGGCTGTGATGAATCAGGCTGGACGTTACGATTACAGTAATCCCGCGACGCTGTTTACGTTAAGTGATATCGGCGTTTCAGCTCACCGTTATCACAATCGTCTGGATATCTTTACCCAAAGTCTGGAAAACGGCGCGGCCCAGCAAGGAATTGAAGTCTCTTTATTAAATGAGAAAGGGCAGACTCTGACTCAGGCAACCAGTGACGCTCAGGGGCATGTGCAGCTGGAAAATGATAAAAACGCGGCATTACTGTTGGCGCGTAAAGACGGTCAGACAACGCTACTCGATTTAAAACTTCCGGCGCTGGACTTAGCAGAATTTAACATTGCTGGCGCGCCAGGCTATAGCAAACAGTTTTTCATGTTTGGCCCACGCGATCTTTATCGCCCAGGTGAAACGGTAATCCTCAATGGTTTGCTGCGTGATGCAGACGGTAAAGCGTTGCCCAATCAACCCATCAAGTTAGACGTGATTAAACCCGATGGGCAGGTACTCAGGAGCGTCGTTAGTCAGCCGGAGAATGGCCTCTACCACTTTACCTGGCCACTCGATAGCAATGCGGCAACCGGTATGTGGCATATTCGCGCTAACACGGGCGATAATCAGTATCGGATGTGGGATTTCCACGTCGAAGATTTTATGCCAGAGCGCATGGCGCTGAATCTGACCGGTGAGAAAACCCCGCTAACGCCGAAAGATGAAGTGAAATTCTCCGTGGTGGGGTACTACCTGTATGGTGCACCTGCTAATGGTAATACTTTGCAAGGGCAACTTTTCCTGCGCCCACTGCGTGAAGCTGTGTCAGCCTTACCTGGTTTTGAATTCGGCGATATAGCTGCCGAAAATCTTTCCCGCACGCTGGATGAAGTTCAGTTGACGCTGGATGATAAAGGGCGCGGCGAAGTTTCTACAGAAAGCCAGTGGAAGGAAACGCATTCCCCATTACAGGTTATTTTCCAGGGTAGTTTGCTGGAATCGGGCGGTCGCCCGGTGACGCGCCGCGCTGAGCAGGCTATCTGGCCTGCCGATGCATTGCCGGGGATCCGTCCGCAGTTCGCCTCGAAATCGGTTTACGATTATCGTACTGACAGCACGGTGAAACAGCCCATTGTTGATGAAGGCAGTAACGCCGCTTTTGACATCGTTTATAGCGATGCGCAAGGCGTGAAAAAAGCCGTGTCGGGCTTGCAGGTGCGCCTGATTCGCGAACGCCGCGATTACTACTGGAACTGGTCAGAAGATGAAGGCTGGCAGTCACAGTTTGATCAAAAAGATCTGATCGAAAATGAACAAACTCTGGATCTGAAAGCGGACGAAACCGGCAAGGTCAGTTTTCCGGTAGAGTGGGGCGCTTATCGTCTGGAAGTCAAAGCGCCGAATGAAGCGGTCAGTAGTGTTCGTTTCTGGGCTGGCTATAGCTGGCAGGACAACAGCGACGGTAGCGGCGCAGTGCGACCCGACCGTGTCACGCTGAAACTGGATAAAGCCAGTTATCGCCCTGGCGACACCATTAAGTTGCATATCGCCGCGCCAACGGCGGGTAAAGGTTATGCGATGGTCGAGTCCAGTGAAGGGCCGCTGTGGTGGCAAGAGATTGATGTTCGGGCTCAAGGGCTGGATCTGACGATTCCGGTCGATAAAACCTGGAATCGTCATGATCTGTATTTAAGTACGCTGGTGGTACGTCCTGGCGATAAATCTCGCTCCGCGACGCCAAAACGCGCGGTTGGTGTGTTGCATCTGCCGCTTGGCGATGAAAACCGTCGCCTCGATCTGGCGCTGGAAACACCAGCAAAAATGCGTCCCAATCAACCATTAACCGTGAAAATTAAAGCCAGCACTAAAAATGGCGAGAAGCCTAAACAGGTGAATGTGCTGGTGTCTGCCGTTGATAGTGGTGTGCTGAATATTACTGACTACGTCACGCCAGATCCGTGGCAGGCGTTCTTTGGTCAGAAACGCTATGGCGCAGACATTTACGATATTTACGGTCAGGTTATTGAAGGTCAGGGGCGTCTGGCAGCTCTGCGTTTCGGTGGCGATGGTGATGAGCTGAAACGTGGTGGTAAACCGCCGGTCAATCACGTCAATATTGTCGTGCAGCAGGCGCTGCCGGTAACGCTCAACGAACAGGGCGAAGGCTCGGTTACACTGCCGATTGGCGATTTTAACGGTGAATTGCGCGTCATGGCGCAAGCCTGGACGGCAGATGACTTCGGTAGCAACGAAAGTAAAGTGATAGTTGCCGCACCGGTGATTGCTGAACTGAACATGCCGCGCTTTATGGCGAGTGGCGATACCTCGCGTCTGACGCTGGATATCACTAATCTTACCGATAAACCGCAAAAACTGAACGTTGCCCTGACCGCCAGTGGTTTGCTTGAACTGGTCAGCGATTCACCCGCAGCCGTTGAATTAGCGCCAGGTGTGCGTACTACGCTGTTTATCCCGGTGCGAGCATTGCCGGGTTATGGCGATGGAGAAATTCAGGCCACCATTAGCGGGTTAGCGTTACCGGGTGAAACCGTTGCCGATCAGCATAAGCAGTGGAAAATCGGCGTCCGTCCGGCGTTCCCGGCACAAACGGTTAATTACGGTACGGCGTTACAGCCTGGTGAGACATGGGCGATTCCGGCGGATGGATTGCAAAACTTCTCGCCTGTTACGCTGGAAGGGCAATTGTTGTTGAGCGGCAAACCACCGCTGAACATCGCACGTTATATCAAAGAGTTAAAAGCGTATCCGTACGGCTGTCTTGAGCAAACCGCCAGCGGCCTGTTTCCGTCACTTTATACCAACGCAGCCCAACTGCAGGCGTTGGGCATCAAAGGCGACAGTGATGAGAAACGCCGTGCATCGGTCGATATCGGCATTTCCCGTTTGCTGCAAATGCAACGTGATAACGGCGGCTTTGCGCTGTGGGATAAAAACGGTGACGAAGAGTACTGGCTGACGGCTTACGTGATGGATTTCCTGGTCCGCGCAGGCGAACAGGGTTACAGCGTGCCGACAGACGCCATTAACCGGGGTAATGAGCGTCTGCTGCGCTATTTACAAGATCCGGGCATGATGTCGATCCCGTACGCGGATAATCTCAAAGCCAGTAAATTCGCCGTACAGTCTTACGCTGCGCTGGTGTTGGCCCGTCAGCAAAAGGCTCCGCTGGGTGCGCTGCGTGAAATCTGGGAGCATCGTGCAGATGCCGCTTCTGGTTTACCGCTGCTGCAACTTGGCGTTGCGCTGAAAACCATGGGTGATGCGACGCGTGGTGAAGAAGCGATTGCGCTGGCGCTGAAAACGCCGCGTAATAGTGATGAGCGGATATGGCTGGGTGATTACGGTAGTTCACTGCGCGACAACGCGTTAATGCTCTCCTTGCTGGAAGAAAATAAACTGCTACCCGATGAGCAGTACACTTTGCTGAACACACTTTCGCAGCAGGCGTTTGGTGAACGCTGGCTATCGACGCAGGAAAGTAACGCGTTGTTCCTGGCTGCCCGTACGATTCAGGATTTACCCGGTAAATGGCAGGCGCAAACCTCTTTCTCAGCTGAGCAGCTGACAGGCGAGAAAGCGCAAAACAGCAATCTGAATAGCGATCAACTTGTCACCTTGCAGGTGAGCAACAGTGGCGATCAGCCGTTATGGTTGCGTATGGATGCCAGCGGTTATCCGCAATCCGCACCTTTACCGGCGAACAATGTGCTGCAAATCGAGCGTCATATTCTTGGTACTGATGGTAAGAGCAAATCGCTGGACTCGTTACGTAGCGGCGATCTGGTGCTGGTGTGGTTGCAGGTAAAAGCCAGTAACAGCGTGCCGGATGCGTTAGTCGTGGATCTGCTGCCTGCGGGTCTGGAACTGGAAAACCAGAATCTGGCGAACGGTAGCGCCAGCCTGGAGCAAAGTGGTGGCGAAGTGCAGAACTTACTGAACCAGATGCAGCAGGCGAGCATTAAGCACATTGAGTTCCGTGACGATCGCTTTGTGGCGGCGGTTGCCGTTGATGAATACCAACCGGTAACGCTGGTGTATCTGGCGCGGGCGGTGACGCCGGGAACGTATCAGGTACCGCAACCGATGGTGGAATCAATGTATGTTCCCCAATGGCGGGCGACCGGCGCGGCTGAAGATCTGCTGATTGTCAGACCGTAA", + "dna_sequence_length": 4962, + "functions": [ + "bacterial alpha2-macroglobulin colonization factor ECAM", + "anti-host protease defense factor", + "periplasmic inner membrane-anchored lipoprotein" + ], + "id": "CDS_2502", + "location": [ + [ + "NC_000913", + 2652287, + "-", + 4962 + ] + ], + "md5": "0ceecdf140632edd5cfa9ecb2a5930ca", + "parent_gene": "", + "protein_md5": "ccf7fe58ed76ae90b1f0c32dcd7a8425", + "protein_translation": "MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSENASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTITTRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRNSLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAGRYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDADGKALPNQPIKLDVIKPDGQVLRSVVSQPENGLYHFTWPLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPKDEVKFSVVGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDKGRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGIRPQFASKSVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSEDEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAGYSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWWQEIDVRAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDENRRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVVQQALPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRFMASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVRALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAIPADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLVRAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQKAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIALALKTPRNSDERIWLGDYGSSLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAARTIQDLPGKWQAQTSFSAEQLTGEKAQNSNLNSDQLVTLQVSNSGDQPLWLRMDASGYPQSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPVTLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP", + "protein_translation_length": 1653, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008299" + ], + [ + "gene_synonym", + "ECK2517" + ], + [ + "gene_synonym", + "EcoGene:EG11600" + ], + [ + "gene_synonym", + "GI:90111451" + ], + [ + "gene_synonym", + "GeneID:946993" + ], + [ + "gene_synonym", + "JW2505" + ], + [ + "gene_synonym", + "NP_417016.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31142" + ], + [ + "gene_synonym", + "b2521" + ], + [ + "gene_synonym", + "sseA" + ] + ], + "dna_sequence": "ATGTCCACGACATGGTTTGTAGGAGCCGACTGGCTCGCCGAACATATTGATGACCCGGAAATTCAGATTATCGATGCCCGCATGGCGTCGCCTGGACAGGAGGATCGTAACGTTGCTCAGGAGTATCTGAATGGACATATTCCCGGCGCAGTGTTTTTTGATATCGAAGCGCTTTCTGATCACACTTCCCCGCTTCCGCACATGCTGCCGCGCCCGGAAACGTTCGCCGTGGCGATGCGTGAATTAGGCGTTAACCAGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTGGGGGGTGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAATCCTGAAGCCGTGGTGAAAGTAACCGATGTATTATTGGCAAGCCATGAAAATACGGCGCAAATTATTGATGCCCGCCCGGCTGCACGTTTTAACGCAGAAGTTGATGAACCTCGCCCAGGTTTACGTCGCGGACATATTCCCGGAGCACTGAATGTTCCGTGGACGGAACTGGTGCGCGAAGGCGAACTAAAAACGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAA", + "dna_sequence_length": 846, + "functions": [ + "3-mercaptopyruvate sulfurtransferase" + ], + "id": "CDS_2503", + "location": [ + [ + "NC_000913", + 2652494, + "+", + 846 + ] + ], + "md5": "8762d54b225be1872937eced05cd939d", + "parent_gene": "", + "protein_md5": "0749bf7dd4e705faeea83da9bb5b3937", + "protein_translation": "MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008301" + ], + [ + "gene_synonym", + "ECK2519" + ], + [ + "gene_synonym", + "EcoGene:EG11601" + ], + [ + "gene_synonym", + "GI:90111452" + ], + [ + "gene_synonym", + "GeneID:946994" + ], + [ + "gene_synonym", + "JW5404" + ], + [ + "gene_synonym", + "NP_417017.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFZ1" + ], + [ + "gene_synonym", + "b2522" + ], + [ + "gene_synonym", + "sseB" + ] + ], + "dna_sequence": "ATGTCCGAAACAAAAAACGAACTTGAAGACCTGCTGGAAAAAGCAGCAACTGAACCGGCGCACCGCCCGGCCTTTTTCCGTACTCTACTGGAATCCACCGTCTGGGTGCCTGGTACGGCGGCGCAGGGCGAGGCTGTGGTTGAAGATAGCGCGCTTGATTTACAGCACTGGGAAAAAGAAGACGGCACCAGCGTCATTCCTTTTTTCACCTCGTTAGAAGCACTTCAACAGGCGGTTGAAGACGAACAGGCATTTGTCGTAATGCCCGTTCGCACGCTGTTTGAGATGACACTTGGCGAAACGCTCTTCCTTAATGCCAAACTGCCAACCGGTAAAGAATTTATGCCGCGTGAAATCAGTTTGTTGATTGGTGAAGAGGGAAATCCGCTGAGCAGCCAGGAAATCCTGGAAGGCGGTGAATCGCTGATATTATCGGAAGTCGCAGAGCCGCCAGCACAAATGATTGATTCACTCACCACCTTATTTAAAACCATTAAGCCGGTGAAGCGTGCTTTTATTTGTTCAATTAAAGAGAACGAAGAGGCACAGCCTAATTTACTTATTGGCATTGAAGCCGATGGTGATATCGAAGAAATTATTCAGGCGACGGGAAGTGTAGCGACCGATACATTACCTGGCGATGAACCAATCGATATTTGTCAGGTGAAAAAAGGGGAAAAAGGAATTAGCCACTTTATTACCGAACATATTGCGCCATTCTATGAACGTCGCTGGGGTGGTTTTTTGCGTGACTTTAAACAGAATCGGATAATCTAA", + "dna_sequence_length": 777, + "functions": [ + "rhodanase-like enzyme, sulfur transfer from thiosulfate" + ], + "id": "CDS_2504", + "location": [ + [ + "NC_000913", + 2654933, + "-", + 777 + ] + ], + "md5": "7ab6d99177efdd4edf9ba77e1a622fe7", + "parent_gene": "", + "protein_md5": "3cd421e54b68db44f5c854e1255dda60", + "protein_translation": "MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008305" + ], + [ + "gene_synonym", + "ECK2520" + ], + [ + "gene_synonym", + "EcoGene:EG12310" + ], + [ + "gene_synonym", + "GI:90111453" + ], + [ + "gene_synonym", + "GeneID:948766" + ], + [ + "gene_synonym", + "JW2507" + ], + [ + "gene_synonym", + "NP_417018.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37095" + ], + [ + "gene_synonym", + "b2523" + ], + [ + "gene_synonym", + "pepB" + ], + [ + "gene_synonym", + "yfhI" + ] + ], + "dna_sequence": "ATGACAGAAGCGATGAAGATTACCCTCTCTACCCAACCTGCCGACGCGCGCTGGGGAGAAAAAGCAACTTACAGCATTAATAATGACGGCATTACCCTGCATTTGAACGGGGCAGACGATCTGGGGCTGATCCAGCGTGCGGCGCGCAAGATTGACGGTCTGGGCATCAAGCATGTTCAGTTAAGCGGTGAAGGCTGGGATGCGGATCGCTGCTGGGCATTCTGGCAAGGTTACAAAGCCCCGAAAGGCACGCGTAAAGTGGTGTGGCCGGATCTGGACGATGCCCAGCGCCAGGAACTGGATAACCGCCTGATGATCATCGACTGGGTGCGTGACACCATCAACGCACCGGCAGAAGAATTGGGACCATCGCAACTGGCACAGCGTGCTGTTGATCTGATCAGCAACGTCGCGGGCGATCGTGTGACTTATCGGATCACCAAAGGCGAAGATCTGCGTGAGCAAGGTTATATGGGGCTGCACACAGTCGGACGCGGTTCAGAACGTTCTCCGGTATTGCTGGCGCTGGATTACAACCCAACTGGCGATAAAGAAGCGCCAGTGTACGCGTGCCTGGTAGGTAAAGGTATCACTTTTGACTCCGGCGGCTACAGCATCAAACAGACTGCGTTTATGGACTCGATGAAGTCGGACATGGGCGGCGCGGCAACGGTTACCGGGGCGCTGGCATTTGCCATTACGCGCGGACTGAACAAGCGCGTGAAGCTGTTCCTCTGCTGTGCGGATAACCTGATTAGCGGCAATGCGTTCAAGCTGGGCGATATCATCACCTATCGCAACGGTAAAAAAGTTGAAGTGATGAACACTGATGCCGAAGGGCGTCTGGTGCTTGCCGATGGTCTGATTGATGCCAGTGCGCAGAAACCGGAAATGATCATTGATGCGGCGACCCTCACCGGGGCGGCGAAAACTGCGCTGGGTAATGATTATCACGCGCTGTTCAGTTTTGACGATGCGCTGGCCGGTCGCTTGCTGGCGAGTGCCGCGCAGGAGAACGAACCGTTCTGGCGTCTGCCGCTGGCGGAGTTCCACCGCAGCCAGCTGCCGTCTAACTTTGCCGAACTGAACAATACCGGAAGCGCGGCGTATCCGGCAGGCGCGAGCACGGCGGCGGGCTTCCTGTCGCACTTTGTTGAGAACTATCAGCAAGGCTGGCTGCATATCGACTGCTCGGCGACTTACCGTAAAGCGCCGGTTGAACAGTGGTCTGCGGGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAA", + "dna_sequence_length": 1284, + "functions": [ + "aminopeptidase B" + ], + "id": "CDS_2505", + "location": [ + [ + "NC_000913", + 2656358, + "-", + 1284 + ] + ], + "md5": "95ee75f7d295e0b571b58a628de627db", + "parent_gene": "", + "protein_md5": "6ee152a5a913b9821bafe71b6237e54c", + "protein_translation": "MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLIQRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVVWPDLDDAQRQELDNRLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLASAAQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008309" + ], + [ + "gene_synonym", + "ECK2521" + ], + [ + "gene_synonym", + "EcoGene:EG12311" + ], + [ + "gene_synonym", + "GI:16130449" + ], + [ + "gene_synonym", + "GeneID:945196" + ], + [ + "gene_synonym", + "JW2508" + ], + [ + "gene_synonym", + "NP_417019.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0L9" + ], + [ + "gene_synonym", + "b2524" + ], + [ + "gene_synonym", + "iscX" + ], + [ + "gene_synonym", + "yfhJ" + ] + ], + "dna_sequence": "ATGGGACTTAAGTGGACCGATAGCCGCGAAATTGGCGAAGCACTGTACGATGCGTATCCCGATCTTGATCCGAAAACGGTTCGATTCACCGATATGCATCAGTGGATTTGCGATCTGGAAGATTTCGACGACGACCCGCAGGCATCCAACGAGAAAATCCTCGAAGCGATTTTGTTAGTCTGGCTGGACGAGGCCGAATAA", + "dna_sequence_length": 201, + "functions": [ + "Fe(2+) donor and activity modulator for cysteine desulfurase" + ], + "id": "CDS_2506", + "location": [ + [ + "NC_000913", + 2656736, + "-", + 201 + ] + ], + "md5": "1b29a55fcf1c6b3e6cb87639ef9d0a06", + "parent_gene": "", + "protein_md5": "e4776e4a90b74421af46968294e1b9ec", + "protein_translation": "MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008311" + ], + [ + "gene_synonym", + "ECK2522" + ], + [ + "gene_synonym", + "EcoGene:EG11328" + ], + [ + "gene_synonym", + "GI:16130450" + ], + [ + "gene_synonym", + "GeneID:947160" + ], + [ + "gene_synonym", + "JW2509" + ], + [ + "gene_synonym", + "NP_417020.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9R4" + ], + [ + "gene_synonym", + "b2525" + ], + [ + "gene_synonym", + "fdx" + ] + ], + "dna_sequence": "ATGCCAAAGATTGTTATTTTGCCTCATCAGGATCTCTGCCCTGATGGCGCTGTTCTGGAAGCTAATAGCGGTGAAACCATTCTCGACGCAGCTCTGCGTAACGGTATCGAGATTGAACACGCCTGTGAAAAATCCTGTGCTTGCACCACCTGCCACTGCATCGTTCGTGAAGGTTTTGACTCACTGCCGGAAAGCTCAGAGCAGGAAGACGACATGCTGGACAAAGCCTGGGGACTGGAGCCGGAAAGCCGTTTAAGCTGCCAGGCGCGCGTTACCGACGAAGATTTAGTAGTCGAAATCCCGCGTTACACTATCAACCATGCGCGTGAGCATTAA", + "dna_sequence_length": 336, + "functions": [ + "[2Fe-2S] ferredoxin" + ], + "id": "CDS_2507", + "location": [ + [ + "NC_000913", + 2657083, + "-", + 336 + ] + ], + "md5": "dcb460844b7d99123d16d2b9e1bb272e", + "parent_gene": "", + "protein_md5": "65886732974b5f7a601190682a3b3ef5", + "protein_translation": "MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008315" + ], + [ + "gene_synonym", + "ECK2523" + ], + [ + "gene_synonym", + "EcoGene:EG12130" + ], + [ + "gene_synonym", + "GI:16130451" + ], + [ + "gene_synonym", + "GeneID:944885" + ], + [ + "gene_synonym", + "JW2510" + ], + [ + "gene_synonym", + "NP_417021.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Z1" + ], + [ + "gene_synonym", + "b2526" + ], + [ + "gene_synonym", + "hsc" + ], + [ + "gene_synonym", + "hscA" + ] + ], + "dna_sequence": "ATGGCCTTATTACAAATTAGTGAACCTGGTTTGAGTGCTGCGCCGCATCAGCGTCGTCTGGCGGCCGGTATTGACCTGGGCACAACCAACTCGCTGGTGGCGACAGTGCGCAGCGGTCAGGCCGAAACGTTAGCCGATCATGAAGGCCGTCACCTGCTGCCATCTGTTGTTCACTATCAACAGCAAGGGCATTCGGTGGGTTATGACGCGCGTACTAATGCAGCGCTCGATACCGCCAACACAATTAGTTCTGTTAAACGCCTGATGGGACGCTCGCTGGCTGATATCCAGCAACGCTATCCGCATCTGCCTTATCAATTCCAGGCCAGCGAAAACGGCCTGCCGATGATTGAAACGGCGGCGGGGCTGCTGAACCCGGTGCGCGTTTCTGCGGACATCCTCAAAGCACTGGCGGCGCGGGCAACTGAAGCCCTGGCAGGCGAGCTGGATGGTGTAGTTATCACCGTTCCGGCGTACTTTGACGATGCCCAGCGTCAGGGCACCAAAGACGCGGCGCGTCTGGCGGGCCTTCACGTCCTGCGCTTACTTAACGAACCGACCGCTGCGGCTATCGCCTACGGGCTGGATTCCGGTCAGGAAGGCGTGATCGCCGTTTATGACCTCGGTGGCGGGACGTTTGATATTTCCATTCTGCGCTTAAGTCGCGGCGTGTTTGAAGTGCTGGCAACCGGCGGTGATTCCGCGCTCGGCGGCGATGATTTCGACCATCTGCTGGCGGATTACATTCGCGAGCAGGCGGGCATTCCTGATCGTAGCGATAACCGCGTTCAGCGTGAACTGCTGGATGCCGCCATTGCAGCCAAAATCGCGCTGAGCGATGCGGACTCCGTGACCGTTAACGTTGCGGGCTGGCAGGGCGAAATCAGCCGTGAACAATTCAATGAACTGATCGCGCCACTGGTAAAACGAACCTTACTGGCTTGTCGTCGCGCGCTGAAAGACGCGGGTGTAGAAGCTGATGAAGTGCTGGAAGTGGTGATGGTGGGCGGTTCTACTCGCGTGCCGCTGGTGCGTGAACGGGTAGGCGAATTTTTCGGTCGTCCACCGCTGACTTCCATCGACCCGGATAAAGTCGTCGCTATTGGCGCGGCGATTCAGGCGGATATTCTGGTGGGTAACAAGCCAGACAGCGAAATGCTGTTGCTTGATGTGATCCCACTGTCGCTGGGCCTCGAAACGATGGGCGGCCTGGTGGAGAAAGTGATTCCGCGTAATACCACTATTCCGGTGGCCCGCGCTCAGGATTTCACCACCTTTAAAGATGGTCAGACGGCGATGTCTATCCATGTAATGCAGGGTGAGCGCGAACTGGTGCAGGACTGCCGCTCACTGGCGCGTTTTGCGCTGCGTGGTATTCCGGCGCTACCGGCTGGCGGTGCGCATATTCGCGTGACGTTCCAGGTCGATGCCGACGGTCTTTTGAGCGTGACGGCGATGGAGAAATCCACCGGCGTTGAGGCGTCTATTCAGGTCAAACCGTCTTACGGTCTGACCGATAGCGAAATCGCTTCGATGATCAAAGACTCAATGAGCTATGCCGAGCAGGACGTAAAAGCCCGAATGCTGGCAGAACAAAAAGTAGAAGCGGCGCGTGTGCTGGAAAGTCTGCACGGCGCGCTGGCTGCTGATGCCGCGCTGTTAAGCGCCGCAGAACGTCAGGTCATTGACGATGCTGCCGCTCACCTGAGTGAAGTGGCGCAGGGCGATGATGTTGACGCCATCGAACAAGCGATTAAAAACGTAGACAAACAAACCCAGGATTTCGCCGCTCGCCGCATGGACCAGTCGGTTCGTCGTGCGCTGAAAGGCCATTCCGTGGACGAGGTTTAA", + "dna_sequence_length": 1851, + "functions": [ + "DnaK-like molecular chaperone specific for IscU" + ], + "id": "CDS_2508", + "location": [ + [ + "NC_000913", + 2658935, + "-", + 1851 + ] + ], + "md5": "67f7b01fcf58e70d9cad56cd2b1e6121", + "parent_gene": "", + "protein_md5": "d2746a20c66cfb1cdc9c1eb5b8feda3c", + "protein_translation": "MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV", + "protein_translation_length": 616, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008317" + ], + [ + "gene_synonym", + "ECK2524" + ], + [ + "gene_synonym", + "EcoGene:EG12131" + ], + [ + "gene_synonym", + "GI:16130452" + ], + [ + "gene_synonym", + "GeneID:946995" + ], + [ + "gene_synonym", + "JW2511" + ], + [ + "gene_synonym", + "NP_417022.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6L9" + ], + [ + "gene_synonym", + "b2527" + ], + [ + "gene_synonym", + "hscB" + ], + [ + "gene_synonym", + "yfhE" + ] + ], + "dna_sequence": "ATGGATTACTTCACCCTCTTTGGCTTGCCTGCCCGCTATCAACTCGATACCCAGGCGCTGAGCCTGCGTTTTCAGGATCTACAACGTCAGTATCATCCTGATAAATTCGCCAGCGGAAGCCAGGCGGAACAACTCGCCGCCGTACAGCAATCTGCAACCATTAACCAGGCCTGGCAAACGCTGCGTCATCCGTTAATGCGCGCGGAATATTTGCTTTCTTTGCACGGCTTTGATCTCGCCAGCGAGCAGCATACTGTGCGCGACACCGCGTTCCTGATGGAACAGTTGGAGCTGCGCGAAGAGCTGGACGAGATCGAACAGGCGAAAGATGAAGCGCGGCTGGAAAGCTTTATCAAACGTGTGAAAAAGATGTTTGATACCCGCCATCAGTTGATGGTTGAACAGTTAGACAACGAGACGTGGGACGCGGCGGCGGATACCGTGCGTAAGCTGCGTTTTCTCGATAAACTGCGAAGCAGTGCCGAACAACTCGAAGAAAAACTGCTCGATTTTTAA", + "dna_sequence_length": 516, + "functions": [ + "HscA co-chaperone, J domain-containing protein Hsc56", + "IscU-specific chaperone HscAB" + ], + "id": "CDS_2509", + "location": [ + [ + "NC_000913", + 2659467, + "-", + 516 + ] + ], + "md5": "7a2ec59668f0034a9970a4207f61b59d", + "parent_gene": "", + "protein_md5": "faf6c0209a96fd32e79e56c86c191611", + "protein_translation": "MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008319" + ], + [ + "gene_synonym", + "ECK2525" + ], + [ + "gene_synonym", + "EcoGene:EG12132" + ], + [ + "gene_synonym", + "GI:16130453" + ], + [ + "gene_synonym", + "GeneID:946999" + ], + [ + "gene_synonym", + "JW2512" + ], + [ + "gene_synonym", + "NP_417023.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAC8" + ], + [ + "gene_synonym", + "b2528" + ], + [ + "gene_synonym", + "iscA" + ], + [ + "gene_synonym", + "yfhF" + ] + ], + "dna_sequence": "ATGTCGATTACACTGAGCGACAGTGCAGCAGCGCGAGTAAATACCTTTCTGGCTAACCGCGGTAAAGGGTTTGGCCTGCGTCTGGGCGTGAGAACCTCCGGGTGTTCAGGTATGGCTTATGTACTGGAATTTGTTGACGAACCGACGCCGGAAGACATCGTGTTTGAAGACAAAGGCGTGAAAGTCGTGGTCGATGGCAAGAGCCTGCAATTTCTGGACGGTACGCAGCTGGACTTCGTAAAAGAAGGCCTGAACGAAGGGTTTAAATTCACCAACCCGAACGTCAAAGATGAGTGTGGTTGCGGCGAAAGCTTCCACGTTTGA", + "dna_sequence_length": 324, + "functions": [ + "FeS cluster assembly protein" + ], + "id": "CDS_2510", + "location": [ + [ + "NC_000913", + 2659886, + "-", + 324 + ] + ], + "md5": "ce692ac214833b69569144ee10b355a7", + "parent_gene": "", + "protein_md5": "e8b7d7694ac4753e5216a53d66d207fe", + "protein_translation": "MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008321" + ], + [ + "gene_synonym", + "ECK2526" + ], + [ + "gene_synonym", + "EcoGene:EG13395" + ], + [ + "gene_synonym", + "GI:16130454" + ], + [ + "gene_synonym", + "GeneID:947002" + ], + [ + "gene_synonym", + "JW2513" + ], + [ + "gene_synonym", + "NP_417024.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACD4" + ], + [ + "gene_synonym", + "b2529" + ], + [ + "gene_synonym", + "hsm-5" + ], + [ + "gene_synonym", + "iscU" + ], + [ + "gene_synonym", + "miaC" + ], + [ + "gene_synonym", + "nifU" + ], + [ + "gene_synonym", + "yfhN" + ] + ], + "dna_sequence": "ATGGCTTACAGCGAAAAAGTTATCGACCATTACGAGAATCCGCGTAACGTGGGTTCCTTTGACAACAACGACGAGAACGTCGGCAGCGGCATGGTGGGGGCACCGGCCTGTGGCGACGTGATGAAGTTGCAGATTAAAGTCAACGATGAAGGTATCATTGAAGACGCGCGTTTTAAAACTTACGGCTGCGGTTCCGCTATCGCTTCCAGCTCCCTGGTCACCGAATGGGTGAAAGGGAAGTCTCTCGACGAAGCGCAGGCGATCAAAAACACCGATATTGCTGAAGAACTTGAACTGCCGCCGGTGAAAATTCACTGTTCTATTCTGGCAGAAGACGCGATCAAAGCCGCCATTGCGGACTATAAAAGCAAACGTGAAGCAAAATAA", + "dna_sequence_length": 387, + "functions": [ + "iron-sulfur cluster assembly scaffold protein" + ], + "id": "CDS_2511", + "location": [ + [ + "NC_000913", + 2660289, + "-", + 387 + ] + ], + "md5": "ac3097ce753333f90bd05e8df220f7f4", + "parent_gene": "", + "protein_md5": "ecad0a2b61665c6066ff039f2211b326", + "protein_translation": "MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008324" + ], + [ + "gene_synonym", + "ECK2527" + ], + [ + "gene_synonym", + "EcoGene:EG12677" + ], + [ + "gene_synonym", + "GI:49176235" + ], + [ + "gene_synonym", + "GeneID:947004" + ], + [ + "gene_synonym", + "JW2514" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6B7" + ], + [ + "gene_synonym", + "YP_026169.1" + ], + [ + "gene_synonym", + "b2530" + ], + [ + "gene_synonym", + "iscS" + ], + [ + "gene_synonym", + "nuvC" + ], + [ + "gene_synonym", + "yfhO" + ], + [ + "gene_synonym", + "yzzO" + ] + ], + "dna_sequence": "ATGAAATTACCGATTTATCTCGACTACTCCGCAACCACGCCGGTGGACCCGCGTGTTGCCGAGAAAATGATGCAGTTTATGACGATGGACGGAACCTTTGGTAACCCGGCCTCCCGTTCTCACCGTTTCGGCTGGCAGGCTGAAGAAGCGGTAGATATCGCCCGTAATCAGATTGCCGATCTGGTCGGCGCTGATCCGCGTGAAATCGTCTTTACCTCTGGTGCAACCGAATCTGACAACCTGGCGATCAAAGGTGCAGCCAACTTTTATCAGAAAAAAGGCAAGCACATCATCACCAGCAAAACCGAACACAAAGCGGTACTGGATACCTGCCGTCAGCTGGAGCGCGAAGGTTTTGAAGTCACCTACCTGGCACCGCAGCGTAACGGCATTATCGACCTGAAAGAACTTGAAGCAGCGATGCGTGACGACACCATCCTCGTGTCCATCATGCACGTAAATAACGAAATCGGCGTGGTGCAGGATATCGCGGCTATCGGCGAAATGTGCCGTGCTCGTGGCATTATCTATCACGTTGATGCAACCCAGAGCGTGGGTAAACTGCCTATCGACCTGAGCCAGTTGAAAGTTGACCTGATGTCTTTCTCCGGTCACAAAATCTATGGCCCGAAAGGTATCGGTGCGCTGTATGTACGTCGTAAACCGCGCGTACGCATCGAAGCGCAAATGCACGGCGGCGGTCACGAGCGCGGTATGCGTTCCGGCACTCTGCCTGTTCACCAGATCGTCGGAATGGGCGAGGCCTATCGCATCGCAAAAGAAGAGATGGCGACCGAGATGGAACGTCTGCGCGGCCTGCGTAACCGTCTGTGGAACGGCATCAAAGATATCGAAGAAGTTTACCTGAACGGTGACCTGGAACACGGTGCGCCGAACATTCTCAACGTCAGCTTCAACTACGTTGAAGGTGAGTCGCTGATTATGGCGCTGAAAGACCTCGCAGTTTCTTCAGGTTCCGCCTGTACGTCAGCAAGCCTCGAACCGTCCTACGTGCTGCGCGCGCTGGGGCTGAACGACGAGCTGGCACATAGCTCTATCCGTTTCTCTTTAGGTCGTTTTACTACTGAAGAAGAGATCGACTACACCATCGAGTTAGTTCGTAAATCCATCGGTCGTCTGCGTGACCTTTCTCCGCTGTGGGAAATGTACAAGCAGGGCGTGGATCTGAACAGCATCGAATGGGCTCATCATTAA", + "dna_sequence_length": 1215, + "functions": [ + "cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent" + ], + "id": "CDS_2512", + "location": [ + [ + "NC_000913", + 2661531, + "-", + 1215 + ] + ], + "md5": "224185fe9b0009d8a468121ae39b9403", + "parent_gene": "", + "protein_md5": "858f1fe35d5f51a75188c72882269fe8", + "protein_translation": "MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH", + "protein_translation_length": 404, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008326" + ], + [ + "gene_synonym", + "ECK2528" + ], + [ + "gene_synonym", + "EcoGene:EG13397" + ], + [ + "gene_synonym", + "GI:16130456" + ], + [ + "gene_synonym", + "GeneID:945279" + ], + [ + "gene_synonym", + "JW2515" + ], + [ + "gene_synonym", + "NP_417026.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGK8" + ], + [ + "gene_synonym", + "b2531" + ], + [ + "gene_synonym", + "iscR" + ], + [ + "gene_synonym", + "yfhP" + ] + ], + "dna_sequence": "ATGAGACTGACATCTAAAGGGCGCTATGCCGTGACCGCAATGCTTGACGTTGCGCTCAACTCTGAAGCGGGCCCGGTACCGTTGGCTGATATTTCCGAACGTCAGGGAATTTCCCTTTCTTATCTGGAACAACTGTTTTCCCGTCTGCGTAAAAATGGTCTGGTTTCCAGCGTACGTGGACCAGGCGGTGGTTATCTGTTAGGCAAAGATGCCAGCAGCATCGCCGTTGGCGAAGTAATTAGCGCCGTTGACGAATCTGTAGATGCCACCCGTTGTCAGGGTAAAGGCGGCTGCCAGGGCGGCGATAAATGCCTGACCCACGCGCTGTGGCGTGATTTGAGCGACCGTCTCACCGGTTTTCTCAACAACATTACTTTAGGCGAACTGGTTAATAACCAGGAAGTGCTGGATGTGTCTGGTCGTCAGCATACTCACGACGCGCCACGCACCCGCACACAAGACGCGATCGACGTTAAGTTACGCGCTTAA", + "dna_sequence_length": 489, + "functions": [ + "isc operon transcriptional repressor", + "suf operon transcriptional activator", + "oxidative stress- and iron starvation-inducible", + "autorepressor" + ], + "id": "CDS_2513", + "location": [ + [ + "NC_000913", + 2662131, + "-", + 489 + ] + ], + "md5": "425a5f6517919772121f7e3cc2d71695", + "parent_gene": "", + "protein_md5": "de6f99239b4941ac1360cd737b466eb9", + "protein_translation": "MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKLRA", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008332" + ], + [ + "gene_synonym", + "ECK2529" + ], + [ + "gene_synonym", + "EcoGene:EG13452" + ], + [ + "gene_synonym", + "GI:16130457" + ], + [ + "gene_synonym", + "GeneID:948610" + ], + [ + "gene_synonym", + "JW2516" + ], + [ + "gene_synonym", + "NP_417027.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE01" + ], + [ + "gene_synonym", + "b2532" + ], + [ + "gene_synonym", + "trmJ" + ], + [ + "gene_synonym", + "yfhQ" + ] + ], + "dna_sequence": "ATGCTGCAAAATATTCGAATTGTGCTGGTGGAGACGTCACACACCGGCAATATGGGTTCTGTTGCCCGTGCCATGAAAACAATGGGATTAACCAATCTGTGGCTGGTTAATCCACTGGTGAAACCCGACTCCCAGGCGATTGCCCTGGCAGCAGGGGCCAGCGATGTGATTGGTAATGCTCACATCGTCGATACGCTCGACGAAGCGTTAGCCGGTTGTAGCCTGGTGGTGGGCACCAGCGCACGTTCCCGCACGCTGCCATGGCCGATGCTCGACCCGCGCGAATGCGGCCTGAAAAGCGTCGCTGAAGCGGCAAATACCCCGGTGGCGCTGGTGTTTGGTCGCGAGCGCGTCGGCTTGACCAATGAAGAGTTGCAGAAATGCCATTATCATGTCGCGATTGCGGCTAACCCGGAATACAGCTCGCTGAACCTGGCGATGGCGGTTCAGGTTATTGCCTATGAAGTGCGCATGGCCTGGCTGGCAACTCAGGAAAACGGCGAGCAGGTCGAGCATGAAGAGACGCCGTATCCGCTGGTCGATGATCTGGAGCGTTTTTATGGTCATCTGGAACAAACGCTGCTGGCAACCGGTTTTATCCGTGAAAACCATCCGGGGCAGGTGATGAATAAATTGCGCCGTCTGTTTACCCGTGCGCGCCCGGAAAGCCAGGAGTTGAATATCCTGCGCGGGATTCTGGCTTCTATTGAGCAGCAGAATAAAGGTAACAAGGCCGAATAA", + "dna_sequence_length": 741, + "functions": [ + "tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent" + ], + "id": "CDS_2514", + "location": [ + [ + "NC_000913", + 2663323, + "-", + 741 + ] + ], + "md5": "8a4659662410f907d94aabc5dd2eced0", + "parent_gene": "", + "protein_md5": "09f9c8a98471672eae8a4f00a1503757", + "protein_translation": "MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008337" + ], + [ + "gene_synonym", + "ECK2530" + ], + [ + "gene_synonym", + "EcoGene:EG10983" + ], + [ + "gene_synonym", + "GI:16130458" + ], + [ + "gene_synonym", + "GeneID:947285" + ], + [ + "gene_synonym", + "JW2517" + ], + [ + "gene_synonym", + "NP_417028.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADG4" + ], + [ + "gene_synonym", + "b2533" + ], + [ + "gene_synonym", + "ssyA" + ], + [ + "gene_synonym", + "suhB" + ] + ], + "dna_sequence": "ATGCATCCGATGCTGAACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAACGATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACACGATTCGTAAATCTTACCCACAGCACACCATCATCACCGAAGAAAGCGGTGAACTTGAAGGTACTGATCAGGATGTTCAATGGGTTATCGATCCACTGGATGGCACTACCAACTTTATCAAACGTCTGCCGCACTTCGCGGTATCTATCGCTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACGCCACTACCTACATCAACATCGTCGGCAAACTGTTCAACGAATGTGCAGACTTCCGTCGTACCGGTTCTGCGGCGCTGGATCTGGCTTACGTCGCTGCGGGTCGTGTTGACGGTTTCTTTGAAATCGGTCTGCGCCCGTGGGACTTCGCCGCAGGCGAGCTGCTGGTTCGTGAAGCGGGCGGCATCGTCAGCGACTTCACCGGTGGTCATAACTACATGCTGACCGGTAACATCGTTGCTGGTAACCCGCGCGTTGTTAAAGCCATGCTGGCGAACATGCGTGACGAGTTAAGCGACGCTCTGAAGCGTTAA", + "dna_sequence_length": 804, + "functions": [ + "inositol monophosphatase" + ], + "id": "CDS_2515", + "location": [ + [ + "NC_000913", + 2663442, + "+", + 804 + ] + ], + "md5": "55a8da2bdcb51028d22bb94c48abedf7", + "parent_gene": "", + "protein_md5": "ccdb8a845e15184007f49a2366f7bc56", + "protein_translation": "MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008340" + ], + [ + "gene_synonym", + "ECK2531" + ], + [ + "gene_synonym", + "EcoGene:EG13453" + ], + [ + "gene_synonym", + "GI:226524738" + ], + [ + "gene_synonym", + "GeneID:945059" + ], + [ + "gene_synonym", + "JW2518" + ], + [ + "gene_synonym", + "NP_417029.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77538" + ], + [ + "gene_synonym", + "b2534" + ], + [ + "gene_synonym", + "yfhR" + ] + ], + "dna_sequence": "ATGGCACTGCCAGTGAACAAACGCGTTCCCAAAATTCTGTTTATTCTCTTTGTTGTTGCCTTCTGCGTTTATTTAGTGCCGCGCGTTGCCATCAACTTCTTCTATTATCCCGACGATAAAATTTACGGTCCCGATCCCTGGTCGGCGGAATCCGTCGAATTTACGGCTAAGGACGGTACTCGTCTGCAAGGCTGGTTTATCCCTTCTTCGACGGGCCCTGCTGACAACGCCATCGCAACCATCATTCATGCTCACGGCAATGCCGGAAATATGTCCGCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATCCCGGATGGCGAACACATTGATGCTTTTTCCGATCGTCACGGCGATGTTTATCGCGAACAGATGGTGGACTTTATCCTTAGCGCGTTGAATCCGCAGAACTAA", + "dna_sequence_length": 855, + "functions": [ + "putative S9 family prolyl oligopeptidase" + ], + "id": "CDS_2516", + "location": [ + [ + "NC_000913", + 2664390, + "+", + 855 + ] + ], + "md5": "b667ccf2d5d6583c5596e1b0f834accc", + "parent_gene": "", + "protein_md5": "7488463354ecbdbf4d07993f0b67ae82", + "protein_translation": "MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008346" + ], + [ + "gene_synonym", + "ECK2532" + ], + [ + "gene_synonym", + "EcoGene:EG13418" + ], + [ + "gene_synonym", + "GI:90111454" + ], + [ + "gene_synonym", + "GeneID:947009" + ], + [ + "gene_synonym", + "JW5878" + ], + [ + "gene_synonym", + "NP_417030.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P54901" + ], + [ + "gene_synonym", + "b2535" + ], + [ + "gene_synonym", + "csi-16" + ], + [ + "gene_synonym", + "csiE" + ] + ], + "dna_sequence": "ATGATGCCTACGCTTGCTCCACCATCTGTCCTTTCGGCTCCCCAGCGCCGCTGCCAGATCTTGCTGACGCTCTTTCAGCCGGGGTTGACCGCCACCATGGCAACCTTCAGCGAGCTTAATGGTGTGGATGATGATATTGCCAGTCTTGATATCAGCGAAACAGGACGGGAGATCCTGCGCTATCATCAACTCACACTGACGACTGGTTATGACGGTAGCTACCGGGTTGAAGGTACAGTGCTTAACCAACGTTTGTGTTTATTTCACTGGCTACGACGTGGTTTCCGTCTGTGTCCGTCATTTATTACCAGCCAATTCACCCCCGCCCTGAAGAGTGAACTGAAGCGGCGCGGAATTGCGCGTAACTTTTACGACGATACCAATCTACAAGCGTTAGTGAATCTCTGCTCCCGACGGCTGCAAAAACGCTTTGAATCGCGCGATATTCATTTCCTGTGTCTGTATCTGCAATATTGTTTGCTGCAGCACCACGCTGGAATTACGCCTCAGTTTAATCCGCTCCAACGTCGCTGGGCGGAATCCTGCCTTGAATTTCAGGTAGCGCAGGAAATTGGACGCCACTGGCAGCGTCGGGCGCTCCAGCCTGTACCACCTGATGAGCCACTGTTTATGGCACTACTTTTTTCCATGTTGCGGGTTCCCGATCCATTGCGGGATGCGCATCAGCGGGACAGACAATTGCGTCAGTCTATCAAACGTCTGGTAAACCATTTTCGTGAGCTGGGAAATGTTCGTTTTTATGATGAACAGGGGTTATGTGATCAGCTTTATACCCACCTCGCCCAGGCGTTAAATCGCAGTTTGTTTGCCATCGGTATTGATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATCTATACGGACCTGACGCTGACAACACATCAACAGGAGCAGATCCGCAAAATGCTCGAATCAGCATGA", + "dna_sequence_length": 1281, + "functions": [ + "stationary phase inducible protein" + ], + "id": "CDS_2517", + "location": [ + [ + "NC_000913", + 2665435, + "+", + 1281 + ] + ], + "md5": "a218e0e516e7b76ae36f8bd4bbd382dd", + "parent_gene": "", + "protein_md5": "4539360304fc8443a12558e1c4d8c0f3", + "protein_translation": "MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008348" + ], + [ + "gene_synonym", + "ECK2533" + ], + [ + "gene_synonym", + "EcoGene:EG13454" + ], + [ + "gene_synonym", + "GI:16130461" + ], + [ + "gene_synonym", + "GeneID:947007" + ], + [ + "gene_synonym", + "JW2520" + ], + [ + "gene_synonym", + "NP_417031.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47142" + ], + [ + "gene_synonym", + "b2536" + ], + [ + "gene_synonym", + "hcaT" + ], + [ + "gene_synonym", + "yfhS" + ] + ], + "dna_sequence": "ATGGTTTTGCAATCCACGCGCTGGTTGGCGCTCGGCTATTTCACATACTTTTTTAGTTACGGCATTTTTCTACCTTTCTGGAGCGTCTGGCTTAAAGGGATTGGTTTAACGCCAGAAACCATCGGCCTGTTATTGGGGGCAGGTCTGGTTGCCCGTTTCCTCGGGAGTTTGCTCATCGCGCCCCGCGTCAGCGATCCTTCCCGCCTGATTTCCGCCTTGCGCGTGCTGGCACTGCTGACACTTCTCTTTGCTGTCGCCTTCTGGGCGGGGGCGCACGTAGCGTGGCTGATGCTGGTGATGATTGGCTTTAACCTCTTTTTCTCACCACTGGTACCGTTGACCGATGCACTGGCGAATACGTGGCAAAAGCAGTTCCCGCTTGATTACGGCAAAGTGCGACTGTGGGGCTCGGTGGCGTTTGTCATTGGCTCGGCGCTGACGGGCAAACTGGTCACTATGTTTGATTATCGGGTGATCCTCGCGCTGTTGACGTTGGGCGTGGCATCCATGCTGCTCGGCTTTCTCATCCGTCCGACGATTCAGCCACAAGGGGCAAGTCGCCAGCAGGAGAGCACCGGTTGGTCTGCGTGGTTGGCGCTGGTTCGCCAGAACTGGCGCTTTCTGGCCTGCGTTTGTTTATTGCAGGGGGCACATGCGGCCTATTACGGTTTTAGCGCCATTTACTGGCAGGCAGCTGGCTACTCGGCCTCGGCGGTGGGGTATTTGTGGTCGCTGGGCGTGGTGGCGGAAGTCATTATCTTTGCGCTGAGTAATAAACTTTTCCGCCGTTGTAGTGCACGCGATATGCTGTTGATCTCGGCGATTTGCGGCGTAGTGCGCTGGGGCATTATGGGAGCAACTACGGCGTTGCCGTGGTTGATAGTGGTGCAAATTCTGCATTGCGGCACCTTCACGGTCTGCCACCTGGCCGCCATGCGTTATATTGCTGCTCGCCAGGGTAGCGAAGTCATCCGTTTACAGGCGGTTTACTCTGCCGTCGCGATGGGCGGCAGTATCGCTATCATGACCGTTTTCGCCGGTTTCCTGTATCAATATCTGGGCCACGGCGTGTTCTGGGTAATGGCGCTGGTGGCGCTTCCGGCAATGTTTTTGCGCCCGAAAGTTGTTCCCTCATGCTGA", + "dna_sequence_length": 1140, + "functions": [ + "putative 3-phenylpropionic transporter" + ], + "id": "CDS_2518", + "location": [ + [ + "NC_000913", + 2667846, + "-", + 1140 + ] + ], + "md5": "25171749e81d282039e007d9ba1eed61", + "parent_gene": "", + "protein_md5": "d2e7d0b083eaf00e77aaa538711b503e", + "protein_translation": "MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVILALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008351" + ], + [ + "gene_synonym", + "ECK2534" + ], + [ + "gene_synonym", + "EcoGene:EG13455" + ], + [ + "gene_synonym", + "GI:16130462" + ], + [ + "gene_synonym", + "GeneID:947000" + ], + [ + "gene_synonym", + "JW2521" + ], + [ + "gene_synonym", + "NP_417032.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47141" + ], + [ + "gene_synonym", + "b2537" + ], + [ + "gene_synonym", + "hcaR" + ], + [ + "gene_synonym", + "phdR" + ], + [ + "gene_synonym", + "yfhT" + ] + ], + "dna_sequence": "ATGGAACTACGGCATTTACGCTATTTCGTCGCAGTGGCGCAGGCACTGAACTTTACCCGTGCGGCGGAAAAACTGCATACCTCACAGCCTTCGTTAAGCAGCCAGATCCGCGATCTTGAAAACTGTGTCGGTGTTCCGTTACTGGTGAGGGATAAGCGCAAAGTCGCGTTGACGGCGGCGGGAGAATGTTTTCTCCAGGACGCGCTGGCAATCCTCGAACAAGCGGAAAATGCCAAATTACGGGCGCGGAAAATTGTTCAGGAAGACAGACAATTAACCATTGGCTTTGTGCCATCGGCGGAAGTGAATTTACTGCCAAAAGTATTACCGATGTTTCGTCTCAGACAGCCAGACACCTTGATTGAGCTGGTGAGTTTAATCACCACGCAACAGGAGGAAAAAATTCGCCGTGGTGAACTCGACGTCGGCTTAATGCGCCATCCTGTTTATAGCCCGGAGATTGATTATCTGGAGCTTTTTGACGAACCATTAGTGGTTGTGTTACCGGTTGATCACCCTTTAGCACATGAAAAAGAGATCACCGCCGCGCAACTGGATGGCGTGAATTTCGTCAGTACCGATCCGGTGTATTCCGGTTCGCTTGCGCCGATCGTTAAAGCGTGGTTTGCGCAAGAAAACAGCCAGCCAAATATCGTCCAGGTGGCAACGAATATTCTGGTGACCATGAATCTGGTGGGCATGGGGCTGGGCGTCACTTTGATACCCGGTTATATGAATAATTTTAATACCGGACAGGTTGTTTTTCGTCCCATTGCCGGAAATGTGCCTTCCATTGCTTTACTGATGGCGTGGAAGAAAGGGGAGATGAAGCCGGCATTACGCGATTTCATCGCCATTGTGCAGGAACGTTTGGCAAGCGTAACGGCATAA", + "dna_sequence_length": 891, + "functions": [ + "hca operon transcriptional regulator" + ], + "id": "CDS_2519", + "location": [ + [ + "NC_000913", + 2668896, + "-", + 891 + ] + ], + "md5": "3b2c4b244bf1d552e3f5568af9abb7e8", + "parent_gene": "", + "protein_md5": "de66fefae2695402d2b9a57258e15605", + "protein_translation": "MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4518" + ], + [ + "gene_synonym", + "EcoGene:EG14501" + ], + [ + "gene_synonym", + "GI:556503836" + ], + [ + "gene_synonym", + "GeneID:14678510" + ], + [ + "gene_synonym", + "YP_008592385.1" + ], + [ + "gene_synonym", + "b4706" + ], + [ + "gene_synonym", + "iroK" + ] + ], + "dna_sequence": "ATGAAGCCGGCATTACGCGATTTCATCGCCATTGTGCAGGAACGTTTGGCAAGCGTAACGGCATAA", + "dna_sequence_length": 66, + "functions": [ + "3-hydroxypropionic acid resistance peptide" + ], + "id": "CDS_2520", + "location": [ + [ + "NC_000913", + 2668071, + "-", + 66 + ] + ], + "md5": "fc1143b9ad9a8d64b3459633d8b95a37", + "parent_gene": "", + "protein_md5": "a8df40f5ee4d2ee6dd3d3892f0881ebe", + "protein_translation": "MKPALRDFIAIVQERLASVTA", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008355" + ], + [ + "gene_synonym", + "ECK2535" + ], + [ + "gene_synonym", + "EcoGene:EG13456" + ], + [ + "gene_synonym", + "GI:16130463" + ], + [ + "gene_synonym", + "GeneID:946998" + ], + [ + "gene_synonym", + "JW2522" + ], + [ + "gene_synonym", + "NP_417033.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABR5" + ], + [ + "gene_synonym", + "b2538" + ], + [ + "gene_synonym", + "digA" + ], + [ + "gene_synonym", + "hcaA" + ], + [ + "gene_synonym", + "hcaA1" + ], + [ + "gene_synonym", + "hcaE" + ], + [ + "gene_synonym", + "phdC1" + ], + [ + "gene_synonym", + "yfhU" + ] + ], + "dna_sequence": "ATGACCACACCCTCAGATTTGAACATTTACCAACTGATTGACACCCAAAATGGTCGGGTCACTCCGCGTATTTATACCGACCCGGATATTTACCAACTGGAGCTTGAGCGTATTTTCGGTCGTTGCTGGCTATTTCTCGCCCACGAAAGCCAGATCCCAAAACCCGGTGATTTCTTTAACACCTACATGGGAGAAGATGCGGTTGTCGTAGTGCGTCAGAAAGACGGCAGCATCAAGGCGTTTCTCAACCAATGCCGCCACCGGGCCATGCGTGTGAGTTATGCAGATTGCGGCAACACTCGCGCCTTTACCTGCCCGTATCACGGCTGGTCTTATGGCATTAACGGCGAGTTGATCGATGTACCGCTGGAACCTCGCGCCTACCCACAAGGGTTGTGTAAATCCCACTGGGGACTAAACGAAGTTCCTTGTGTGGAGAGTTATAAAGGGCTAATTTTTGGCAACTGGGATACCAGCGCACCGGGCCTGCGTGATTACCTGGGTGACATTGCCTGGTATCTGGATGGCATGCTGGATCGTCGCGAAGGCGGCACCGAAATTGTCGGCGGCGTACAAAAGTGGGTGATCAACTGTAACTGGAAATTCCCGGCAGAGCAGTTCGCCAGTGACCAGTATCATGCTCTGTTCAGCCATGCTTCTGCCGTTCAGGTATTAGGGGCGAAAGATGATGGCAGCGATAAGCGCCTCGGTGATGGACAAACCGCCCGCCCGGTGTGGGAAACCGCCAAAGATGCGCTGCAATTTGGTCAGGACGGTCACGGTAGCGGTTTCTTCTTTACTGAAAAACCGGATGCTAATGTCTGGGTCGATGGCGCAGTTTCAAGCTATTACCGCGAAACCTATGCCGAAGCAGAACAACGTTTAGGTGAAGTTCGCGCCCTGCGCCTGGCGGGTCATAACAATATTTTCCCCACGCTTTCATGGCTAAACGGCACTGCCACACTCCGCGTCTGGCATCCGCGCGGCCCTGATCAAGTTGAAGTGTGGGCGTTCTGTATTACTGACAAAGCCGCCTCCGATGAAGTTAAAGCCGCTTTTGAAAACAGCGCCACTCGTGCTTTTGGTCCTGCTGGTTTTCTCGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGA", + "dna_sequence_length": 1362, + "functions": [ + "3-phenylpropionate dioxygenase, large (alpha) subunit" + ], + "id": "CDS_2521", + "location": [ + [ + "NC_000913", + 2669032, + "+", + 1362 + ] + ], + "md5": "c432285f447e819163853ed92657472b", + "parent_gene": "", + "protein_md5": "45265b1d220acf5e7a0c02795b2e3f92", + "protein_translation": "MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008357" + ], + [ + "gene_synonym", + "ECK2536" + ], + [ + "gene_synonym", + "EcoGene:EG13457" + ], + [ + "gene_synonym", + "GI:16130464" + ], + [ + "gene_synonym", + "GeneID:946997" + ], + [ + "gene_synonym", + "JW2523" + ], + [ + "gene_synonym", + "NP_417034.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47140" + ], + [ + "gene_synonym", + "b2539" + ], + [ + "gene_synonym", + "digB" + ], + [ + "gene_synonym", + "hcaA" + ], + [ + "gene_synonym", + "hcaA2" + ], + [ + "gene_synonym", + "hcaB" + ], + [ + "gene_synonym", + "hcaF" + ], + [ + "gene_synonym", + "phdC2" + ], + [ + "gene_synonym", + "yfhV" + ] + ], + "dna_sequence": "ATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCGACCGCCGCAAAGGCGTCCAGCCACCGACAACCTGGATTTTTAATGACACCAAAGACCAGCTGGAGCGGCGAATCGCCCGTCTGGAAACGGGCATGGCCTGGGCAGAAGAGCCGCCGTCACGCACCCGTCACTTAATCAGCAACTGCCAGATAAGCGAAACCGACATCCCAAACGTATTTGCTGTGCGGGTAAATTATCTGCTTTATCGGGCACAAAAAGAGCGCGATGAAACATTCTATGTTGGAACGCGTTTCGACAAAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAAGCGGTAATCACTTCCCATAACCTGAGTGTACTGTTCTGA", + "dna_sequence_length": 519, + "functions": [ + "3-phenylpropionate dioxygenase, small (beta) subunit" + ], + "id": "CDS_2522", + "location": [ + [ + "NC_000913", + 2670390, + "+", + 519 + ] + ], + "md5": "72a888ed392e411ae143729132ab83bb", + "parent_gene": "", + "protein_md5": "2efd003e6e679e0984648127783658c1", + "protein_translation": "MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008359" + ], + [ + "gene_synonym", + "ECK2537" + ], + [ + "gene_synonym", + "EcoGene:EG13458" + ], + [ + "gene_synonym", + "GI:16130465" + ], + [ + "gene_synonym", + "GeneID:947015" + ], + [ + "gene_synonym", + "JW2524" + ], + [ + "gene_synonym", + "NP_417035.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABW0" + ], + [ + "gene_synonym", + "b2540" + ], + [ + "gene_synonym", + "hcaA3" + ], + [ + "gene_synonym", + "hcaC" + ], + [ + "gene_synonym", + "phdB" + ], + [ + "gene_synonym", + "yfhW" + ] + ], + "dna_sequence": "ATGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGCCCTGTTCAACGTTGGCGGCGAGTTTTATGCCATTAACGATCGTTGCAGCCATGGTAATGCGTCAATGTCAGAAGGGTATCTGGAAGATGACGCCACGGTGGAGTGCCCGCTACACGCCGCCAGTTTTTGCCTGAAAACGGGGAAAGCGTTATGCCTGCCCGCCACCGATCCGCTCACCACTTATCCAGTACACGTTGAAGGTGGTGACATTTTCATCGACTTACCGGAGGCGCAGCCATGA", + "dna_sequence_length": 321, + "functions": [ + "3-phenylpropionate dioxygenase, ferredoxin subunit" + ], + "id": "CDS_2523", + "location": [ + [ + "NC_000913", + 2670908, + "+", + 321 + ] + ], + "md5": "6ca637969a6b64fb9036a78012011063", + "parent_gene": "", + "protein_md5": "f28ad39557289061743829a0c5dd4184", + "protein_translation": "MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008361" + ], + [ + "gene_synonym", + "ECK2538" + ], + [ + "gene_synonym", + "EcoGene:EG13459" + ], + [ + "gene_synonym", + "GI:16130466" + ], + [ + "gene_synonym", + "GeneID:945346" + ], + [ + "gene_synonym", + "JW2525" + ], + [ + "gene_synonym", + "NP_417036.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CI31" + ], + [ + "gene_synonym", + "b2541" + ], + [ + "gene_synonym", + "hcaB" + ], + [ + "gene_synonym", + "phdD" + ], + [ + "gene_synonym", + "yfhX" + ] + ], + "dna_sequence": "ATGAGCGATCTGCATAACGAGTCCATTTTTATTACCGGCGGCGGATCGGGATTAGGGCTGGCGCTGGTCGAGCGATTTATCGAAGAAGGCGCGCAGGTTGCCACGCTGGAACTGTCGGCGGCAAAAGTCGCCAGTCTGCGTCAGCGATTTGGCGAACATATTCTGGCGGTGGAAGGTAACGTGACCTGTTATGCCGATTATCAACGCGCGGTCGATCAGATCCTGACTCGTTCCGGCAAGCTGGATTGTTTTATCGGCAATGCAGGCATCTGGGATCACAATGCCTCACTGGTTAATACTCCCGCAGAGACGCTCGAAACCGGCTTCCACGAGCTGTTTAACGTCAATGTTCTCGGTTACCTGCTGGGCGCAAAAGCCTGCGCTCCGGCGTTAATCGCCAGTGAAGGCAGCATGATTTTCACACTGTCAAATGCCGCCTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGCCATTTTACCGCTGCAATTTTTCCCGCAACCGGCGGATTTTACGGGGCCGTATGTGATGTTGACATCGCGGCGCAATAATCGCGCATTAAGCGGTGTGATGATCAACGCTGATGCGGGTTTAGCGATTCGCGGCATTCGCCACGTAGCGGCTGGGCTGGATCTTTAA", + "dna_sequence_length": 813, + "functions": [ + "2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase" + ], + "id": "CDS_2524", + "location": [ + [ + "NC_000913", + 2671225, + "+", + 813 + ] + ], + "md5": "3869891d1700e6c2ff762a8839b35869", + "parent_gene": "", + "protein_md5": "e9714f88a73655d115d4e235c9793be8", + "protein_translation": "MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008363" + ], + [ + "gene_synonym", + "ECK2539" + ], + [ + "gene_synonym", + "EcoGene:EG13460" + ], + [ + "gene_synonym", + "GI:16130467" + ], + [ + "gene_synonym", + "GeneID:945427" + ], + [ + "gene_synonym", + "JW2526" + ], + [ + "gene_synonym", + "NP_417037.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77650" + ], + [ + "gene_synonym", + "b2542" + ], + [ + "gene_synonym", + "hcaA4" + ], + [ + "gene_synonym", + "hcaD" + ], + [ + "gene_synonym", + "phdA" + ], + [ + "gene_synonym", + "yfhY" + ] + ], + "dna_sequence": "ATGAAAGAAAAAACGATCATTATTGTCGGTGGCGGGCAAGCGGCGGCAATGGCTGCGGCCTCGCTACGCCAGCAAGGGTTCACCGGTGAGCTGCATCTGTTTTCCGATGAGCGACATCTTCCTTATGAACGACCTCCACTCTCGAAATCCATGTTGCTGGAAGATTCCCCGCAGTTACAGCAGGTGTTACCCGCTAACTGGTGGCAGGAAAACAATGTTCATCTGCATTCCGGTGTAACCATCAAAACGCTGGGTCGCGACACACGAGAGTTAGTGTTAACCAACGGCGAAAGCTGGCACTGGGATCAGCTTTTTATAGCAACCGGCGCGGCAGCTCGACCGCTGCCGTTGCTTGATGCACTGGGAGAACGCTGCTTTACCCTACGCCATGCCGGTGATGCCGCCAGACTGCGAGAAGTTCTGCAGCCCGAACGGTCAGTCGTGATTATCGGTGCCGGAACTATTGGTCTGGAACTGGCTGCCAGCGCCACGCAGCGCAGATGTAAGGTGACAGTGATTGAACTGGCGGCAACCGTCATGGGCCGTAATGCACCACCGCCCGTGCAACGCTATCTTTTACAGCGCCACCAGCAGGCTGGTGTGCGCATTCTGCTCAATAATGCCATTGAACATGTGGTCGATGGTGAAAAAGTAGAACTGACGCTGCAAAGTGGGGAAACGCTTCAGGCTGATGTGGTGATTTACGGTATTGGTATCAGCGCCAACGAGCAACTGGCTCGCGAGGCCAACCTTGATACTGCCAATGGCATTGTCATTGATGAGGCTTGCCGCACCTGCGATCCCGCGATCTTTGCCGGTGGCGATGTGGCAATCACTCGTCTTGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGATCCAGAGCGGCAAAACGTTTGATGCGAAACTGCTGATAGATGAGAACATCGCGCTTAAATCACTGTAA", + "dna_sequence_length": 1203, + "functions": [ + "phenylpropionate dioxygenase, ferredoxin reductase subunit" + ], + "id": "CDS_2525", + "location": [ + [ + "NC_000913", + 2672047, + "+", + 1203 + ] + ], + "md5": "9a0679e2100478dc484f0fc148925e35", + "parent_gene": "", + "protein_md5": "974f95778097ff09013240ea1f74cf81", + "protein_translation": "MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQQVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALGERCFTLRHAGDAARLREVLQPERSVVIIGAGTIGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGISANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQIAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGDDWLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSGKTFDAKLLIDENIALKSL", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008365" + ], + [ + "gene_synonym", + "ECK2540" + ], + [ + "gene_synonym", + "EcoGene:EG13462" + ], + [ + "gene_synonym", + "GI:145698300" + ], + [ + "gene_synonym", + "GeneID:947365" + ], + [ + "gene_synonym", + "JW2527" + ], + [ + "gene_synonym", + "NP_417038.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD47" + ], + [ + "gene_synonym", + "b2543" + ], + [ + "gene_synonym", + "yphA" + ] + ], + "dna_sequence": "ATGAACACACTACGTTATTTTGATTTTGGAGCTGCCCGCCCCGTTTTGTTATTAATTGCCCGTATCGCCGTGGTCTTAATTTTCATTATTTTTGGTTTTCCCAAAATGATGGGCTTTGACGGTACGGTCCAATATATGGCCTCGTTGGGCGCGCCAATGCCGATGCTGGCAGCGATTATTGCGGTAGTTATGGAAGTGCCCGCCGCGATATTAATCGTGCTTGGCTTTTTCACCCGTCCGCTGGCGGTGCTGTTTATTTTCTACACGCTGGGTACGGCGGTGATTGGTCACCATTACTGGGATATGACCGGCGATGCGGTTGGGCCAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAG", + "dna_sequence_length": 423, + "functions": [ + "DoxX family inner membrane protein" + ], + "id": "CDS_2526", + "location": [ + [ + "NC_000913", + 2673346, + "+", + 423 + ] + ], + "md5": "fbddde9ae453ef87a6550523b4cd28af", + "parent_gene": "", + "protein_md5": "d5b99aaccb74912ff045ab72909bc3e4", + "protein_translation": "MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008368" + ], + [ + "gene_synonym", + "ECK2541" + ], + [ + "gene_synonym", + "EcoGene:EG13463" + ], + [ + "gene_synonym", + "GI:16130469" + ], + [ + "gene_synonym", + "GeneID:947017" + ], + [ + "gene_synonym", + "JW2528" + ], + [ + "gene_synonym", + "NP_417039.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76584" + ], + [ + "gene_synonym", + "b2544" + ], + [ + "gene_synonym", + "yphB" + ] + ], + "dna_sequence": "ATGACCATCTATACCTTATCCCACGGGTCGCTAAAGCTGGACGTTTCTGACCAGGGCGGCGTAATCGAAGGCTTCTGGCGCGATACGACGCCGCTCTTACGTCCTGGTAAAAAAAGCGGTGTGGCAACCGATGCCTCATGTTTTCCGCTGGTGCCATTTGCAAACCGGGTGAGCGGCAATCGTTTTGTCTGGCAGGGGCGTGAGTATCAACTGCAACCGAATGTTGAGTGGGATGCGCACTATCTACACGGCGATGGCTGGCTGGGCGAGTGGCAATGTGTCTCGCACAGCGATGATAGTTTGTGTCTGGTGTATGAACATCGCAGCGGTGTCTATCACTATCGGGTAAGTCAGGCGTTTCATTTAACGGCGGATACGCTGACGGTGACGCTCTCTGTCACCAATCAAGGGGCAGAGACGCTGCCATTTGGTACCGGCTGGCATCCTTATTTTCCGTTGTCGCCGCAAACGCGGATTCAGGCACAGGCGAGCGGTTACTGGCTGGAGCGGGAGCAGTGGCTGGCGGGTGAGTTTTGCGAGCAGCTACCGCAGGAACTGGATTTTAACCAGCCCGCGCCGTTGCCGCGCCAGTGGGTGAACAATGGTTTTGCCGGATGGAATGGTCAGGCCCGCATCGAGCAGCCGCAGGAAGGTTATGCCATCATCATGGAAACGACGCCACCTGCACCGTGTTATTTCATCTTTGTTTCCGACCCTGCGTTTGATAAAGGATATGCGTTTGATTTCTTCTGTCTGGAACCGATGAGCCATGCGCCGGATGATCATCATCGCCCGGAAGGGGGTGATCTCATTGCGCTAGCACCAGGGGAATCAACAACTTCAGAGATGTCGTTGCGGGTAGAGTGGCTGTAA", + "dna_sequence_length": 873, + "functions": [ + "mutarotase superfamily protein, YphB family" + ], + "id": "CDS_2527", + "location": [ + [ + "NC_000913", + 2674688, + "-", + 873 + ] + ], + "md5": "32f733a9807b5ad3eaa7e6164205ada0", + "parent_gene": "", + "protein_md5": "d67830c3cf09347513af4f49e92fd5e5", + "protein_translation": "MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008370" + ], + [ + "gene_synonym", + "ECK2542" + ], + [ + "gene_synonym", + "EcoGene:EG13464" + ], + [ + "gene_synonym", + "GI:90111455" + ], + [ + "gene_synonym", + "GeneID:947019" + ], + [ + "gene_synonym", + "JW5842" + ], + [ + "gene_synonym", + "NP_417040.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77360" + ], + [ + "gene_synonym", + "b2545" + ], + [ + "gene_synonym", + "yphC" + ] + ], + "dna_sequence": "ATGAAAACGATGCTGGCAGCTTATTTACCAGGAAATTCGACCGTCGATCTGCGGGAAGTTGCGGTGCCGACGCCGGGGATTAACCAGGTACTGATCAAAATGAAATCCTCCGGGATTTGCGGAAGCGATGTCCACTATATCTATCATCAACACCGTGCCACAGCGGCGGCACCCGATAAACCGTTATACCAGGGCTTTATCAACGGTCATGAACCGTGCGGGCAGATTGTGGCGATGGGGCAAGGCTGCCGCCATTTTAAAGAGGGCGACCGCGTGCTGGTGTATCACATTTCTGGCTGTGGTTTTTGCCCGAACTGCCGTCGCGGTTTTCCTATTTCTTGTACTGGCGAAGGAAAAGCGGCTTACGGCTGGCAGCGTGACGGCGGTCATGCCGAATACTTGCTGGCGGAAGAAAAAGATCTGATCCTCCTGCCGGATGCGCTGAGCTACGAAGATGGTGCGTTTATCAGTTGCGGCGTTGGTACAGCGTATGAAGGAATTTTGCGCGGCGAAGTTTCCGGCAGTGATAACGTGCTGGTGGTCGGTCTGGGGCCAGTCGGCATGATGGCGATGATGCTGGCGAAAGGTCGCGGTGCAAAACGGATCATCGGCGTTGATATGCTGCCGGAACGTCTGGCGATGGCAAAACAGTTAGGGGTGATGGATCACGGCTATTTAGCAACCACCGAAGGTCTGCCGCAGATTATCGCCGAACTCACCCACGGTGGCGCGGATGTTGCGCTCGATTGTTCCGGTAATGCCGCAGGTCGCTTGCTGGCACTGCAATCCACCGCTGACTGGGGACGGGTGGTTTACATTGGTGAAACCGGAAAAGTGGAATTCGAGGTCAGCGCCGATCTGATGCACCATCAACGGCGGATTATCGGCTCCTGGGTGACCAGTCTGTTCCATATGGAAAAATGCGCCCATGATCTGACGGACTGGAAGCTGTGGCCGCGTAACGCCATTACCCATCGCTTCTCGCTGGAACAGGCAGGTGATGCCTATGCGCTGATGGCGAGCGGCAAATGCGGGAAAGTTGTGATTAACTTCCCGGATTAA", + "dna_sequence_length": 1062, + "functions": [ + "putative Zn-dependent NAD(P)-binding oxidoreductase" + ], + "id": "CDS_2528", + "location": [ + [ + "NC_000913", + 2675761, + "-", + 1062 + ] + ], + "md5": "facd37b24d2a849097a00eea5aa66908", + "parent_gene": "", + "protein_md5": "664aea0136ed3b684ce730124e65f055", + "protein_translation": "MKTMLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFPD", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008373" + ], + [ + "gene_synonym", + "ECK2543" + ], + [ + "gene_synonym", + "EcoGene:EG13465" + ], + [ + "gene_synonym", + "GI:16130471" + ], + [ + "gene_synonym", + "GeneID:949063" + ], + [ + "gene_synonym", + "JW2530" + ], + [ + "gene_synonym", + "NP_417041.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77315" + ], + [ + "gene_synonym", + "b2546" + ], + [ + "gene_synonym", + "yphD" + ] + ], + "dna_sequence": "ATGTCTGCTTCGTCATTACCATTGCCGCAGGGCAAGAGCGTCTCGCTCAAACAATTTGTCAGTCGCCATATTAATGAGATCGGTTTGCTGGTGGTGATTGCCATTCTTTATCTGGTCTTCTCCCTGAACGCGCCTGGCTTTATCTCATTGAATAACCAGATGAACGTGCTGCGCGATGCCGCCACCATTGGGATTGCCGCCTGGGCGATGACGCTGATTATTATCTCCGGTGAAATTGATGTCAGCGTTGGGCCGATGGTGGCTTTTGTCTCGGTGTGCCTGGCATTTTTGCTGCAATTTGAAGTTCCGCTGGCGGTGGCGTGCCTGCTGGTGTTGCTGTTAGGCGCGCTGATGGGAACGCTGGCCGGGGTGCTGCGCGGCGTGTTTAATGTACCAAGTTTCGTTGCCACACTGGGGCTGTGGAGCGCCCTGCGCGGAATGGGGCTGTTTATGACGAACGCACTGCCAGTGCCGATTGATGAAAACGAGGTGCTGGACTGGCTGGGCGGACAATTTCTCGGTGTGCCGGTATCCGCGCTGATCATGATTGTGTTGTTTGCGCTGTTTGTGTTCATCAGCCGCAAAACCGCCTTCGGGCGCTCGGTTTTTGCCGTTGGCGGTAATGCTACGGCGGCGCAGTTGTGCGGCATCAACGTTCGTCGGGTGCGCATTCTTATCTTTACCCTTTCGGGATTATTAGCGGCGGTGACCGGCATTTTGTTGGCGGCGCGCCTCGGTTCTGGTAACGCAGGTGCCGCAAACGGTCTGGAGTTTGACGTCATCGCCGCGGTCGTGGTCGGCGGTACGGCACTTTCCGGCGGTCGCGGTTCCCTGTTCGGTACATTGCTTGGTGTGCTGGTGATTACGCTAATCGGTAACGGTCTGGTGCTGCTCGGTATTAACTCCTTTTTCCAGCAGGTGGTACGCGGCGTCATCATCGTGGTGGCGGTGCTGGCGAATATCTTGCTGACCCAGCGAAGCAGTAAAGCGAAACGCTAA", + "dna_sequence_length": 999, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_2529", + "location": [ + [ + "NC_000913", + 2676825, + "-", + 999 + ] + ], + "md5": "9a03144075b60cad635fc3de321c9c88", + "parent_gene": "", + "protein_md5": "60641f629888667b5b1346e1f87fde86", + "protein_translation": "MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008376" + ], + [ + "gene_synonym", + "ECK2544" + ], + [ + "gene_synonym", + "EcoGene:EG13466" + ], + [ + "gene_synonym", + "GI:16130472" + ], + [ + "gene_synonym", + "GeneID:948990" + ], + [ + "gene_synonym", + "JW2531" + ], + [ + "gene_synonym", + "NP_417042.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77509" + ], + [ + "gene_synonym", + "b2547" + ], + [ + "gene_synonym", + "yphE" + ] + ], + "dna_sequence": "ATGTTCACGGCAACAGAGGCAGTCCCGGTAGCAAAAGTGGTGGCAGGAAATAAGCGTTATCCCGGCGTCGTTGCGCTGGATAACGTTAACTTCACGCTCAATAAAGGCGAAGTTCGTGCGCTGTTAGGTAAAAACGGCGCGGGCAAATCGACTCTCATTCGAATGCTTACCGGCAGCGAACGCCCGGATAGCGGTGATATCTGGATTGGCGAGACGCGACTGGAAGGTGACGAAGCTACGCTGACTCGCCGTGCCGCTGAACTGGGGGTGCGCGCGGTTTATCAGGAGTTAAGTCTGGTGGAAGGGCTGACAGTGGCGGAAAACCTCTGCCTCGGTCAGTGGCCCCGCCGCAACGGCATGATTGATTACCTGCAAATGGCGCAGGATGCCCAACGTTGCTTACAGGCGCTGGGCGTTGACGTTAGTCCTGAACAACTTGTTTCAACGCTAAGCCCGGCGCAAAAGCAGCTGGTGGAAATTGCGCGGGTGATGAAGGGCGAGCCGCGCGTGGTCATTCTTGATGAACCTACCAGTTCGCTTGCGAGTGCGGAAGTTGAACTGGTGATCAGCGCGGTGAAAAAGATGTCGGCACTGGGCGTGGCGGTGATTTATGTCAGCCACCGGATGGAAGAAATTCGCCGCATTGCCTCCTGTGCCACCGTTATGCGCGATGGTCAGGTGGCGGGCGATGTGATGCTCGAAAACACCTCCACGCATCATATTGTGTCGCTGATGCTCGGGCGCGATCACGTTGATATTGCGCCGGTAGCCCCTCAGGAAATTGTGGATCAGGCCGTGCTGGAAGTCCGTGCGTTACGCCATAAGCCCAAGCTGGAGGATATCAGTTTTACGCTACGTCGTGGCGAAGTGCTCGGCATTGCTGGTCTGCTGGGGGCAGGGCGCAGTGAATTGCTGAAGGCGATTGTTGGGCTGGAGGAGTATGAACAGGGCGAAATTGTTATCAACGGCGAGAAAATCACGCGCCCCGATTACGGCGACATGCTGAAACGCGGCATTGGCTATACGCCAGAAAACCGCAAAGAAGCGGGGATCATTCCCTGGTTGGGCGTTGACGAAAATACAGTGCTGACCAATCGGCAAAAAATCAGCGCCAACGGTGTGCTGCAATGGTCCACCATCCGCCGCCTGACCGAAGAGGTGATGCAGCGGATGACGGTCAAGGCCGCCAGTAGCGAAACACCCATCGGCACGCTTTCTGGTGGCAATCAGCAAAAAGTGGTGATCGGTCGTTGGGTCTATGCTGCCAGCCAGATTTTGTTGCTCGACGAGCCAACGCGCGGCGTCGATATCGAAGCCAAACAGCAGATTTACCGTATTGTCCGTGAGCTGGCTGCCGAAGGAAAAAGCGTGGTGTTTATCTCCAGTGAAGTGGAGGAGTTGCCGCTGGTGTGTGACCGCATCCTGTTATTACAGCACGGCACGTTCTCGCAGGAGTTTCACGCTCCGGTCAATGTGGATGAGCTGATGTCCGCCATTCTGTCTGTGCACTGA", + "dna_sequence_length": 1512, + "functions": [ + "putative sugar ABC transporter ATPase" + ], + "id": "CDS_2530", + "location": [ + [ + "NC_000913", + 2678361, + "-", + 1512 + ] + ], + "md5": "de039a03f219b7d964de07c201f5719c", + "parent_gene": "", + "protein_md5": "f70b35a91014429c50b39103afb4ac29", + "protein_translation": "MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH", + "protein_translation_length": 503, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008378" + ], + [ + "gene_synonym", + "ECK2545" + ], + [ + "gene_synonym", + "EcoGene:EG13467" + ], + [ + "gene_synonym", + "GI:16130473" + ], + [ + "gene_synonym", + "GeneID:947020" + ], + [ + "gene_synonym", + "JW2532" + ], + [ + "gene_synonym", + "NP_417043.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77269" + ], + [ + "gene_synonym", + "b2548" + ], + [ + "gene_synonym", + "yphF" + ] + ], + "dna_sequence": "ATGCCTACAAAAATGAGAACAACCCGTAATCTATTATTAATGGCTACGCTATTAGGTAGCGCACTATTTGCCAGGGCTGCGGAAAAAGAAATGACCATTGGCGCAATATACCTTGATACTCAGGGATACTACGCTGGAGTGCGTCAGGGCGTTCAGGATGCGGCAAAAGATTCCTCAGTACAAGTTCAGTTAATAGAAACTAACGCCCAGGGTGATATTTCGAAAGAAAGTACCTTTGTTGATACCCTCGTGGCGCGTAATGTCGATGCCATTATTTTATCGGCAGTGTCTGAAAATGGCAGTAGCCGTACCGTTCGTCGCGCCAGTGAAGCGGGCATTCCGGTGATTTGCTACAACACCTGTATTAATCAAAAGGGGGTCGATAAATATGTCTCGGCGTATCTGGTCGGCGATCCGCTGGAATTTGGTAAAAAACTGGGTAACGCTGCCGCTGATTATTTTATTGCCAATAAAATTGACCAGCCGAAAATTGCCGTCATCAATTGCGAAGCCTTTGAAGTTTGTGTGCAGCGACGTAAAGGATTTGAAGAAGTTTTAAAATCCCGCGTTCCCGGCGCGCAAATTGTCGCTAATCAGGAAGGGACTGTTTTAGATAAAGCGATTTCCGTTGGTGAAAAACTAATTATCTCCACGCCGGATCTCAACGCCATTATGGGGGAATCGGGCGGTGCGACACTCGGCGCGGTAAAAGCGGTACGTAATCAAAATCAGGCCGGAAAAATTGCTGTTTTCGGTTCGGATATGACAACCGAAATTGCTCAGGAGCTGGAAAACAATCAGGTGCTGAAAGCGGTAGTGGATATTTCCGGTAAGAAAATGGGCAATGCTGTTTTCGCGCAAACATTGAAGGTTATCAATAAACAAGCCGACGGTGAAAAAGTGATTCAGGTGCCTATCGATCTCTATACCAAAACGGAAGACGGTAAACAGTGGCTGGCAACGCACGTTGATGGTCTGCCCTAA", + "dna_sequence_length": 984, + "functions": [ + "putative sugar ABC transporter periplasmic binding protein" + ], + "id": "CDS_2531", + "location": [ + [ + "NC_000913", + 2679367, + "-", + 984 + ] + ], + "md5": "50be0e2b4f4f793b68b0bc529e9f807d", + "parent_gene": "", + "protein_md5": "d2d4694791945a7992117e83cca3474d", + "protein_translation": "MPTKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008380" + ], + [ + "gene_synonym", + "ECK2546" + ], + [ + "gene_synonym", + "EcoGene:EG13468" + ], + [ + "gene_synonym", + "GI:162135907" + ], + [ + "gene_synonym", + "GeneID:947021" + ], + [ + "gene_synonym", + "JW5405" + ], + [ + "gene_synonym", + "NP_417044.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76585" + ], + [ + "gene_synonym", + "b2549" + ], + [ + "gene_synonym", + "yphG" + ] + ], + "dna_sequence": "ATGACTCCAGTAAAAGTGTGGCAAGAGCGCGTTGAGATCCCGACCTATGAAACCGGGCCGCAGGATATACATCCCATGTTCCTGGAAAATCGCGTTTATCAGGGATCGTCCGGCGCGGTTTATCCCTACGGCGTGACCGATACGCTGAGCGAGCAGAAAACCCTGAAATCCTGGCAGGCGGTGTGGCTGGAAAACGACTACATCAAAGTGATGATCCTGCCGGAACTGGGCGGTCGGGTGCATCGCGCGTGGGATAAAGTGAAACAGCGCGATTTTGTTTATCACAATGAAGTCATTAAACCTGCGCTGGTGGGGCTGCTGGGGCCGTGGATTTCCGGTGGGATTGAGTTTAACTGGCCGCAACATCATCGCCCGACCACCTTTATGCCCGTTGATTTCACCCTCGAAGCCCATGAAGACGGTGCACAGACGGTGTGGGTAGGCGAAACGGAGCCGATGCATGGTTTACAGGTGATGACAGGTTTCACCCTGCGCCCTGACCGGGCGGCGCTGGAAATCGCCAGCCGCGTCTATAACGGGAACGCCACGCCGCGTCATTTCTTGTGGTGGGCCAACCCGGCAGTGAAAGGGGGGGAAGGGCATCAGAGCGTCTTCCCGCCGGATGTAACGGCGGTGTTTGATCACGGCAAACGGGCCGTCTCCGCTTTCCCCATCGCTACCGGCACTTACTACAAAGTGGACTACTCCGCTGGAGTGGACATTTCTCGCTATAAAAATGTGCCTGTTCCAACCTCATATATGGCCGAAAAATCGCAGTACGATTTTGTCGGCGCGTGGTGTCACGATGAAGATGGCGGTTTGCTGCACGTTGCCAACCACCATATTGCGCCAGGTAAAAAACAGTGGAGTTGGGGACACAGTGAATTTGGCCAGGCGTGGGATAAGAGTCTGACCGACAATAACGGCCCGTATATCGAACTGATGACCGGTATTTTTGCCGATAACCAGCCCGATTTTACCTGGCTTGATGCTTACGAAGAGAAGCGTTTTGAGCAGTATTTCCTGCCTTATCATTCTTTGGGCATGGTGCAAAATGCCTCCCGCGATGCGGTGATAAAACTCCAGCGTAGTAAGCGGGGGATTGAGTGGGGGCTGTATGCCATCTCTCCGTTGAACGGATACCGCCTGGCGATCCGCGAAATCGGTAAATGCAACGCGTTACTTGATGATGCCGTGGCACTGATGCCTGCGACCGCCATCCAGGGCGTGTTGCACGGTATCAATCCTGAAAGGCTGACCATTGAGCTCTCCGATGCCGACGGCAATATTGTACTGAGTTATCAGGAACATCAGCCGCAAGCGTTGCCGTTACCGGACGTCGCCAAAGCGCCACTGGCAGCACAAGACATTACCAGTACAGATGAAGCCTGGTTTATCGGTCAGCATCTGGAGCAATATCATCACGCCAGCCGTTCACCGTTCGATTACTACCTGCGCGGCGTGGCGCTGGACCCGCTGGATTATCGCTGTAACCTGGCGCTGGCGATGCTGGAATATAACCGCGCAGATTTCCCGCAAGCGGTGGCGTATGCCACTCAGGCTCTGAAACGCGCACATGCGCTGAACAAAAATCCGCAGTGCGGACAGGCGAGTTTGATTCGCGCCAGTGCTTACGAACGTCAGGGACAATATCAACAAGCCGAAGAGGATTTCTGGCGTGCGGTCTGGAGCGGCAACAGCAAAGCCGGTGGCTATTATGGCCTGGCACGACTGGCGGCGCGTAATGGTAACTTCGACGCTGGTCTGGATTTTTGCCAACAAAGTCTTCGCGCCTGCCCAACCAATCAGGAAGTGCTTTGCCTGCATAATCTGCTGCTGGTGTTAAGTGGTCGTCAGGACAACGCGCGTGTGCAGCGCGAGAAACTGCTGCGCGATTATCCGCTGAACGCCACTCTGTGGTGGCTGAACTGGTTCGATGGTCGTAGCGAATCAGCTCTCGCGCAGTGGCGCGGTCTGTGTCAGGGACGCGACGTTAACGCCCTGATGACCGCCGGGCAACTGATTAACTGGGGAATGCCCACCCTGGCGGCAGAGATGCTGAACGCACTGGACTGCCAGCGCACGCTGCCGCTTTACCTGCAAGCCAGCTTGCTGCCGAAAGCCGAACGTGGCGAACTGGTCGCAAAAGCCATTGATGTCTTCCCGCAGTTTGTCCGTTTCCCGAATACGCTGGAAGAAGTGGCGGCGCTGGAGAGTATTGAAGAGTGCTGGTTTGCTCGCCATTTACTAGCTTGCTTCTACTACAACAAACGTAGCTACAACAAAGCCATTGCCTTTTGGCAACGTTGCGTAGAGATGTCGCCGGAGTTTGCCGACGGCTGGCGCGGGTTAGCGATCCATGCGTGGAATAAGCAACACGATTATGAGCTGGCCGCGCGTTATCTTGATAATGCTTATCAGCTTGCGCCGCAGGATGCACGTCTGCTTTTCGAACGGGATTTGCTGGATAAGTTAAGTGGAGCCACACCGGAGAAACGACTGGCGCGTCTGGAAAATAATCTGGAAATTGCGCTGAAACGCGACGACATGACCGCAGAACTGCTCAATTTGTGGCATCTCACGGGTCAGGCAGACAAAGCGGCGGACATTCTCGCCACGCGCAAATTCCACCCGTGGGAAGGCGGGGAAGGGAAGGTCACCAGTCAGTTTATCCTCAACCAGTTATTACGCGCCTGGCAGCATCTTGATGCCAGACAGCCGCAGCAGGCCTGCGAACTGCTTCATGCCGCGCTGCATTATCCGGAGAATTTAAGCGAAGGCCGTTTACCGGGGCAAACTGATAACGACATCTGGTTCTGGCAGGCGATATGCGCCAACGCGCAGGGCGATGAAACTGAAGCGACGCGTTGTTTACGTCTGGCGGCGACCGGCGATCGCACTATTAACATTCACAGTTATTACAACGATCAGCCGGTTGATTATCTCTTCTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGTGGGCGCAAGAGATGGCGAAAACCAGTATCGAAGCGGATTTCTTTGCCGTCTCGCAACCTGACTTGTTGTCGCTGTATGGCGATTTACAACAGCAGCATAAAGAAAAATGCCTGATGGTGGCGATGCTGGCGTCCGCGGGACTCGGGGAGGTTGCGCAATATGAGTCTGCTCGCGCTGAATTGACGGCGATTAATCCGGCTTGGCCGAAAGCGGCATTATTCACCACCGTGATGCCTTTTATTTTTAACCGCGTTCACTAA", + "dna_sequence_length": 3282, + "functions": [ + "DUF4380 domain-containing TPR repeat protein" + ], + "id": "CDS_2532", + "location": [ + [ + "NC_000913", + 2682745, + "-", + 3282 + ] + ], + "md5": "bb8ec88972c7d343e307b5fd00c095ff", + "parent_gene": "", + "protein_md5": "448022546ad9ab25f215107f6e3d10d0", + "protein_translation": "MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQALPLPDVAKAPLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTLAAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDARQPQQACELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEATRCLRLAATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFIFNRVH", + "protein_translation_length": 1093, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008384" + ], + [ + "gene_synonym", + "ECK2547" + ], + [ + "gene_synonym", + "EcoGene:EG13469" + ], + [ + "gene_synonym", + "GI:90111457" + ], + [ + "gene_synonym", + "GeneID:947023" + ], + [ + "gene_synonym", + "JW5406" + ], + [ + "gene_synonym", + "NP_417045.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76586" + ], + [ + "gene_synonym", + "b2550" + ], + [ + "gene_synonym", + "yphH" + ] + ], + "dna_sequence": "ATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAAGGTGACTGGACGCTGTGCCTGAACGTGACGCCCACCAGTATTGAGTGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGCTGGGTTGATCGCTCTGCCAATGCCATTGGTTTGAGTCTGTATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTGGCTTAATACTATTATTCGCCAGACAGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACGCAAATTGGCTTTGGGCAATTAAGCCGCGCACAACAGGTGCTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGA", + "dna_sequence_length": 1194, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2533", + "location": [ + [ + "NC_000913", + 2682863, + "+", + 1194 + ] + ], + "md5": "b13a98fddb6128f4258bddd92e94118f", + "parent_gene": "", + "protein_md5": "a92683830156d0799b51e748973330f4", + "protein_translation": "MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDHTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVSTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI", + "protein_translation_length": 397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008389" + ], + [ + "gene_synonym", + "ECK2548" + ], + [ + "gene_synonym", + "EcoGene:EG10408" + ], + [ + "gene_synonym", + "GI:16130476" + ], + [ + "gene_synonym", + "GeneID:947022" + ], + [ + "gene_synonym", + "JW2535" + ], + [ + "gene_synonym", + "NP_417046.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A825" + ], + [ + "gene_synonym", + "b2551" + ], + [ + "gene_synonym", + "glyA" + ] + ], + "dna_sequence": "ATGTTAAAGCGTGAAATGAACATTGCCGATTATGATGCCGAACTGTGGCAGGCTATGGAGCAGGAAAAAGTACGTCAGGAAGAGCACATCGAACTGATCGCCTCCGAAAACTACACCAGCCCGCGCGTAATGCAGGCGCAGGGTTCTCAGCTGACCAACAAATATGCTGAAGGTTATCCGGGCAAACGCTACTACGGCGGTTGCGAGTATGTTGATATCGTTGAACAACTGGCGATCGATCGTGCGAAAGAACTGTTCGGCGCTGACTACGCTAACGTCCAGCCGCACTCCGGCTCCCAGGCTAACTTTGCGGTCTACACCGCGCTGCTGGAACCAGGTGATACCGTTCTGGGTATGAACCTGGCGCATGGCGGTCACCTGACTCACGGTTCTCCGGTTAACTTCTCCGGTAAACTGTACAACATCGTTCCTTACGGTATCGATGCTACCGGTCATATCGACTACGCCGATCTGGAAAAACAAGCCAAAGAACACAAGCCGAAAATGATTATCGGTGGTTTCTCTGCATATTCCGGCGTGGTGGACTGGGCGAAAATGCGTGAAATCGCTGACAGCATCGGTGCTTACCTGTTCGTTGATATGGCGCACGTTGCGGGCCTGGTTGCTGCTGGCGTCTACCCGAACCCGGTTCCTCATGCTCACGTTGTTACTACCACCACTCACAAAACCCTGGCGGGTCCGCGCGGCGGCCTGATCCTGGCGAAAGGTGGTAGCGAAGAGCTGTACAAAAAACTGAACTCTGCCGTTTTCCCTGGTGGTCAGGGCGGTCCGTTGATGCACGTAATCGCCGGTAAAGCGGTTGCTCTGAAAGAAGCGATGGAGCCTGAGTTCAAAACTTACCAGCAGCAGGTCGCTAAAAACGCTAAAGCGATGGTAGAAGTGTTCCTCGAGCGCGGCTACAAAGTGGTTTCCGGCGGCACTGATAACCACCTGTTCCTGGTTGATCTGGTTGATAAAAACCTGACCGGTAAAGAAGCAGACGCCGCTCTGGGCCGTGCTAACATCACCGTCAACAAAAACAGCGTACCGAACGATCCGAAGAGCCCGTTTGTGACCTCCGGTATTCGTGTAGGTACTCCGGCGATTACCCGTCGCGGCTTTAAAGAAGCCGAAGCGAAAGAACTGGCTGGCTGGATGTGTGACGTGCTGGACAGCATCAATGATGAAGCCGTTATCGAGCGCATCAAAGGTAAAGTTCTCGACATCTGCGCACGTTACCCGGTTTACGCATAA", + "dna_sequence_length": 1254, + "functions": [ + "serine hydroxymethyltransferase" + ], + "id": "CDS_2534", + "location": [ + [ + "NC_000913", + 2685507, + "-", + 1254 + ] + ], + "md5": "e15400b75b6f4425e32c9acef48b230b", + "parent_gene": "", + "protein_md5": "dcfc4b075be45d8d8d4d72d556b4bdb7", + "protein_translation": "MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008396" + ], + [ + "gene_synonym", + "ECK2549" + ], + [ + "gene_synonym", + "EcoGene:EG10456" + ], + [ + "gene_synonym", + "GI:16130477" + ], + [ + "gene_synonym", + "GeneID:947018" + ], + [ + "gene_synonym", + "JW2536" + ], + [ + "gene_synonym", + "NP_417047.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24232" + ], + [ + "gene_synonym", + "b2552" + ], + [ + "gene_synonym", + "fsrB" + ], + [ + "gene_synonym", + "hmp" + ], + [ + "gene_synonym", + "hmpA" + ] + ], + "dna_sequence": "ATGCTTGACGCTCAAACCATCGCTACAGTAAAAGCCACCATCCCTTTACTGGTGGAAACGGGGCCAAAGTTAACCGCCCATTTCTACGACCGTATGTTTACTCATAACCCAGAACTCAAAGAAATTTTTAACATGAGTAACCAGCGTAATGGCGATCAACGTGAAGCCCTGTTTAACGCTATTGCCGCCTACGCCAGTAATATTGAAAACCTGCCTGCGCTGCTGCCAGCGGTAGAAAAAATCGCGCAGAAGCACACCAGCTTCCAGATCAAACCGGAACAGTACAACATCGTCGGTGAACACCTGTTGGCAACGCTGGACGAAATGTTCAGCCCGGGGCAGGAAGTGCTGGACGCGTGGGGTAAAGCCTATGGTGTACTGGCTAATGTATTTATCAATCGCGAGGCGGAAATCTATAACGAAAACGCCAGCAAAGCCGGTGGTTGGGAAGGTACTCGCGATTTCCGCATTGTGGCTAAAACACCGCGCAGCGCGCTTATCACCAGCTTCGAACTGGAGCCGGTCGACGGTGGCGCAGTGGCAGAATACCGTCCGGGGCAATATCTCGGCGTCTGGCTGAAGCCGGAAGGTTTCCCACATCAGGAAATTCGTCAGTACTCTTTGACTCGCAAACCGGATGGCAAAGGCTATCGTATTGCGGTGAAACGCGAAGAGGGTGGGCAGGTATCCAACTGGTTGCACAATCACGCCAATGTTGGCGATGTCGTGAAACTGGTCGCTCCGGCAGGTGATTTCTTTATGGCTGTCGCAGATGACACACCAGTGACGTTAATCTCTGCCGGTGTTGGTCAAACGCCAATGCTGGCAATGCTCGACACGCTGGCAAAAGCAGGCCACACAGCACAAGTGAACTGGTTCCATGCGGCAGAAAATGGCGATGTTCACGCCTTTGCCGATGAAGTTAAGGAACTGGGGCAGTCACTGCCGCGCTTTACCGCGCACACCTGGTATCGTCAGCCGAGCGAAGCCGATCGCGCTAAAGGTCAGTTTGATAGCGAAGGTCTGATGGATTTGAGCAAACTGGAAGGTGCGTTCAGCGATCCGACAATGCAGTTCTATCTCTGCGGCCCGGTTGGCTTCATGCAGTTTACCGCGAAACAGTTAGTGGATCTGGGCGTGAAGCAGGAAAACATTCATTACGAATGCTTTGGCCCGCATAAGGTGCTGTAA", + "dna_sequence_length": 1191, + "functions": [ + "fused nitric oxide dioxygenase/dihydropteridine reductase 2" + ], + "id": "CDS_2535", + "location": [ + [ + "NC_000913", + 2685835, + "+", + 1191 + ] + ], + "md5": "8e03c1cb5b2922529efc1264612191fe", + "parent_gene": "", + "protein_md5": "90ba0f935607a918dd3c749f201a1492", + "protein_translation": "MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008398" + ], + [ + "gene_synonym", + "ECK2550" + ], + [ + "gene_synonym", + "EcoGene:EG10384" + ], + [ + "gene_synonym", + "GI:16130478" + ], + [ + "gene_synonym", + "GeneID:947016" + ], + [ + "gene_synonym", + "JW2537" + ], + [ + "gene_synonym", + "NP_417048.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Z1" + ], + [ + "gene_synonym", + "b2553" + ], + [ + "gene_synonym", + "glnB" + ] + ], + "dna_sequence": "ATGAAAAAGATTGATGCGATTATAAAACCCTTCAAGCTGGACGATGTCCGCGAAGCACTGGCCGAAGTCGGTATTACCGGCATGACGGTGACCGAAGTGAAAGGCTTTGGTCGCCAGAAAGGCCATACCGAGCTGTACCGCGGCGCGGAGTATATGGTGGATTTTCTGCCGAAAGTGAAAATTGAGATTGTCGTACCGGACGACATTGTCGATACCTGTGTCGATACCATTATTCGCACGGCGCAAACCGGCAAAATCGGTGACGGTAAAATCTTCGTCTTTGACGTGGCACGGGTCATTCGCATCCGTACCGGTGAAGAGGACGACGCGGCAATTTAA", + "dna_sequence_length": 339, + "functions": [ + "regulatory protein P-II for glutamine synthetase" + ], + "id": "CDS_2536", + "location": [ + [ + "NC_000913", + 2687408, + "-", + 339 + ] + ], + "md5": "05ef063a6973bbf0de8f85d2185731bc", + "parent_gene": "", + "protein_md5": "8ceb698f0aa0b9491fc60d01c78bde64", + "protein_translation": "MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008400" + ], + [ + "gene_synonym", + "ECK2551" + ], + [ + "gene_synonym", + "EcoGene:EG11285" + ], + [ + "gene_synonym", + "GI:16130479" + ], + [ + "gene_synonym", + "GeneID:947042" + ], + [ + "gene_synonym", + "JW2538" + ], + [ + "gene_synonym", + "NP_417049.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU4" + ], + [ + "gene_synonym", + "b2554" + ], + [ + "gene_synonym", + "glrR" + ], + [ + "gene_synonym", + "qseF" + ], + [ + "gene_synonym", + "yfhA" + ] + ], + "dna_sequence": "ATGAGCCATAAACCTGCGCATTTATTATTGGTCGATGACGATCCGGGATTGCTGAAACTGCTTGGCCTGCGCCTGACCAGCGAAGGCTACAGTGTGGTCACGGCGGAAAGTGGCGCTGAAGGATTACGGGTACTGAATCGCGAAAAAGTAGATTTAGTCATCAGCGACCTGCGGATGGATGAAATGGACGGTATGCAGCTGTTTGCTGAAATCCAGAAAGTGCAGCCGGGAATGCCGGTAATTATTCTTACCGCGCATGGTTCTATTCCCGATGCCGTTGCTGCAACACAGCAGGGCGTTTTTAGTTTCCTCACCAAGCCTGTCGACAAAGACGCGCTATATCAGGCAATTGACGATGCGCTGGAGCAATCCGCGCCAGCCACCGATGAACGCTGGCGCGAGGCAATTGTCACCCGCAGCCCGCTGATGCTGCGTTTGCTGGAACAGGCGCGGCTGGTGGCGCAATCAGACGTCAGCGTTTTGATTAACGGTCAGAGCGGCACCGGGAAAGAGATTTTCGCCCAGGCTATCCACAACGCCAGCCCGCGCAACAGCAAACCATTTATTGCTATTAACTGTGGCGCATTGCCCGAGCAATTGCTGGAGTCGGAGCTGTTTGGTCATGCGCGTGGCGCGTTTACTGGCGCTGTCAGCAATCGCGAAGGTTTATTCCAGGCGGCGGAAGGCGGAACGCTATTTCTCGATGAAATTGGCGATATGCCTGCGCCGTTACAGGTCAAACTGCTGCGCGTGTTGCAGGAGCGTAAAGTGCGCCCGCTGGGCAGTAACCGCGATATTGATATCAATGTGCGGATTATTTCTGCCACTCACCGTGATCTGCCAAAAGCGATGGCGCGCGGGGAATTCCGCGAAGATCTCTATTACCGCCTCAACGTTGTCAGCCTGAAAATTCCGGCACTGGCGGAGCGCACAGAAGACATTCCGCTACTGGCAAATCACCTGTTGCGCCAGGCGGCAGAGCGACATAAACCGTTTGTCCGCGCGTTCTCTACCGATGCGATGAAACGCCTGATGACCGCGAGCTGGCCGGGTAATGTGCGCCAGTTGGTCAACGTGATTGAACAGTGCGTGGCGCTGACCTCATCTCCGGTGATTAGTGATGCGCTGGTGGAGCAGGCGCTGGAGGGTGAAAATACGGCGCTGCCAACCTTTGTTGAGGCACGTAATCAGTTTGAACTCAACTATTTGCGTAAGCTGCTGCAAATCACCAAAGGCAACGTCACCCACGCGGCGAGAATGGCGGGGCGCAACCGGACAGAATTTTATAAACTGCTTTCCCGACACGAGCTGGATGCAAACGATTTCAAGGAATGA", + "dna_sequence_length": 1335, + "functions": [ + "response regulator regulating glmY sRNA in two-component system with sensor protein GlrK" + ], + "id": "CDS_2537", + "location": [ + [ + "NC_000913", + 2688803, + "-", + 1335 + ] + ], + "md5": "7569818fff7cde72ff44f34c658e1562", + "parent_gene": "", + "protein_md5": "2ba542e0ba7f1a945aef8f93486ef43b", + "protein_translation": "MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE", + "protein_translation_length": 444, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008405" + ], + [ + "gene_synonym", + "ECK2552" + ], + [ + "gene_synonym", + "EcoGene:EG12139" + ], + [ + "gene_synonym", + "GI:16130480" + ], + [ + "gene_synonym", + "GeneID:947010" + ], + [ + "gene_synonym", + "JW2539" + ], + [ + "gene_synonym", + "NP_417050.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD44" + ], + [ + "gene_synonym", + "b2555" + ], + [ + "gene_synonym", + "qseG" + ], + [ + "gene_synonym", + "yfhG" + ] + ], + "dna_sequence": "ATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCTGCCATGTCTGGCATTGCTGGGTTGCGTGCAGAATCACAATAAGCCAGCCATTGATACGCCAGCAGAAGAAAAAATTCCGGTTTATCAACTGGCTGACTATCTTTCTACTGAATGTAGCGACATCTGGGCGCTGCAAGGTAAATCAACCGAAACCAATCCGCTTTACTGGCTGCGGGCGATGGATTGTGCTGATCGTTTAATGCCTGCGCAGTCGCGTCAGCAAGCTCGCCAATATGACGACGGCAGCTGGCAAAATACCTTTAAACAAGGGATTTTGCTCGCCGACGCCAAAATTACGCCGTATGAGCGCCGCCAGCTGGTCGCGCGTATTGAAGCGTTAAGTACCGAGATCCCGGCACAGGTTCGCCCACTGTATCAACTCTGGCGCGATGGTCAGGCGCTGCAACTGCAACTGGCGGAAGAGCGCCAACGTTACAGTAAACTCCAGCAGTCCAGCGACAGCGAGCTGGATACATTGCGCCAGCAACATCACGTTCTACAGCAGCAACTGGAACTCACCACCCGCAAGCTGGAAAACCTGACCGATATTGAACGCCAGCTCTCGACCCGCAAACCGGCTGGAAATTTCTCGCCGGATACGCCGCACGAGAGTGAAAAGCCCGCGCCATCCACCCATGAGGTCACTCCTGATGAGCCATAA", + "dna_sequence_length": 714, + "functions": [ + "putative outer membrane protein modulating the QseEF response" + ], + "id": "CDS_2538", + "location": [ + [ + "NC_000913", + 2689506, + "-", + 714 + ] + ], + "md5": "e91b1fbdc7140c73b2edbee8e0c3eb59", + "parent_gene": "", + "protein_md5": "a54a59fba0ecae64b8ca363a5d808d7e", + "protein_translation": "MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTHEVTPDEP", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008409" + ], + [ + "gene_synonym", + "ECK2553" + ], + [ + "gene_synonym", + "EcoGene:EG13461" + ], + [ + "gene_synonym", + "GI:90111458" + ], + [ + "gene_synonym", + "GeneID:947013" + ], + [ + "gene_synonym", + "JW5407" + ], + [ + "gene_synonym", + "NP_417051.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52101" + ], + [ + "gene_synonym", + "b2556" + ], + [ + "gene_synonym", + "glrK" + ], + [ + "gene_synonym", + "qseE" + ], + [ + "gene_synonym", + "yfhK" + ], + [ + "gene_synonym", + "yfhZ" + ] + ], + "dna_sequence": "TTGAAACGCTGGCCCGTTTTTCCCCGCTCATTACGACAACTGGTAATGCTGGCATTTTTGCTGATTCTGCTGCCCCTGTTGGTGCTGGCATGGCAAGCCTGGCAAAGCCTGAATGCGCTTAGCGATCAGGCGGCGCTGGTTAACCGCACTACGCTTATTGATGCCCGGCGCAGTGAAGCGATGACCAACGCGGCGCTGGAGATGGAGCGTAGTTACCGTCAGTATTGCGTGCTGGACGACCCAACCCTGGCGAAGGTTTATCAAAGCCAGCGCAAGCGTTACAGCGAAATGCTCGATGCCCACGCAGGCGTGCTGCCGGACGATAAACTCTACCAGGCATTACGTCAGGATTTGCACAATCTGGCTCAACTTCAGTGTAACAACAGCGGTCCCGATGCTGCCGCCGCCGCACGTCTTGAAGCCTTTGCCAGTGCCAATACCGAAATGGTACAGGCCACGCGCACAGTGGTGTTCTCTCGTGGGCAGCAGCTTCAGCGTGAAATCGCCGAACGTGGGCAATATTTTGGTTGGCAATCGCTGGTGCTATTTCTGGTGAGTCTGGTAATGGTACTGCTTTTCACGCGGATGATTATCGGGCCGGTGAAAAATATCGAGCGCATGATCAACCGTCTGGGGGAAGGGCGTTCTCTGGGCAATAGCGTCTCGTTCAGTGGACCGAGCGAGTTACGCTCGGTTGGGCAACGTATTCTTTGGTTAAGTGAGCGCCTGTCATGGCTGGAATCCCAACGCCATCAATTTTTAAGACATTTATCTCATGAATTAAAAACGCCACTGGCGAGTATGCGCGAGGGCACTGAATTACTGGCTGACCAGGTTGTCGGGCCGCTTACGCCAGAGCAAAAAGAGGTGGTGAGCATTCTTGATAGCAGCAGCCGCAATTTGCAAAAACTGATCGAACAACTGCTTGATTACAACCGTAAACAGGCGGACAGTGCGGTGGAACTGGAGAATGTTGAGTTAGCACCGCTGGTGGAGACAGTGGTTTCTGCTCATAGCCTGCCCGCACGGGCTAAAATGATGCATACCGACGTCGATCTCAAAGCAACAGCTTGCCTGGCGGAGCCAATGCTGCTGATGAGCGTACTGGATAATCTTTACTCCAATGCGGTGCACTACGGGGCTGAATCCGGTAACATTTGCCTTCGCAGCAGTTTACATGGTGCGCGGGTTTATATTGATGTCATCAATACAGGCACGCCCATTCCGCAAGAGGAACGCGCCATGATCTTCGAACCCTTTTTTCAGGGAAGCCACCAGCGAAAAGGGGCGGTGAAGGGCAGCGGTCTGGGATTAAGCATTGCCAGGGATTGTATTCGCCGTATGCAAGGGGAACTGTATCTGGTCGACGAGAGCGGGCAAGACGTTTGTTTCCGCATTGAATTACCGTCGTCGAAAAACACGAAATAA", + "dna_sequence_length": 1428, + "functions": [ + "sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR" + ], + "id": "CDS_2539", + "location": [ + [ + "NC_000913", + 2691098, + "-", + 1428 + ] + ], + "md5": "6e0dee7df2b4e20372c68170c9689315", + "parent_gene": "", + "protein_md5": "bec7fe74b15f97cf68562ccb296787f5", + "protein_translation": "MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLHNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008412" + ], + [ + "gene_synonym", + "ECK2555" + ], + [ + "gene_synonym", + "EcoGene:EG10797" + ], + [ + "gene_synonym", + "GI:49176239" + ], + [ + "gene_synonym", + "GeneID:947032" + ], + [ + "gene_synonym", + "JW2541" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15254" + ], + [ + "gene_synonym", + "YP_026170.1" + ], + [ + "gene_synonym", + "b2557" + ], + [ + "gene_synonym", + "purG" + ], + [ + "gene_synonym", + "purI" + ], + [ + "gene_synonym", + "purL" + ] + ], + "dna_sequence": "ATGATGGAAATTCTGCGTGGTTCGCCTGCACTGTCGGCATTCCGAATCAACAAACTGCTGGCACGTTTTCAGGCTGCCAGGCTCCCGGTTCACAATATTTACGCCGAGTATGTCCATTTTGCTGACCTCAATGCGCCGTTAAACGATGATGAGCACGCACAACTTGAACGCCTGCTGAAATATGGCCCGGCACTCGCCAGCCACGCCCCGCAAGGCAAACTCCTGCTGGTGACCCCGCGTCCTGGCACCATCTCTCCCTGGTCTTCGAAAGCGACCGATATTGCCCATAACTGCGGGCTACAACAGGTAAACCGCCTTGAGCGCGGCGTTGCTTACTATATAGAAGCCGGTACGCTGACCAATGAACAATGGCAGCAGGTTACCGCTGAACTGCACGACCGCATGATGGAAACGGTCTTTTTTGCTTTAGATGATGCAGAGCAGTTGTTTGCCCACCATCAACCGACTCCGGTTACCAGCGTTGATTTGCTGGGGCAGGGCCGTCAGGCGCTGATCGACGCTAACCTGCGTCTTGGCTTGGCTCTGGCGGAAGATGAAATTGACTATCTGCAGGATGCTTTCACAAAGCTTGGTCGTAACCCGAACGACATCGAACTGTATATGTTTGCCCAGGCGAACTCCGAGCACTGCCGCCACAAAATTTTTAACGCCGACTGGGTTATCGATGGTGAACAGCAGCCGAAATCGCTGTTCAAGATGATCAAAAATACTTTCGAAACCACGCCAGATCACGTTCTCTCTGCTTATAAAGATAACGCCGCCGTAATGGAAGGTTCTGAAGTGGGCCGCTACTTTGCTGACCACGAAACGGGCCGCTACGATTTCCATCAGGAACCGGCGCATATTCTGATGAAAGTCGAAACTCACAACCACCCGACGGCGATTTCTCCGTGGCCGGGCGCGGCGACCGGTTCCGGCGGTGAAATCCGCGATGAAGGTGCCACCGGGCGCGGCGCAAAGCCGAAAGCGGGTCTGGTTGGTTTCTCCGTTTCCAACCTGCGAATTCCTGGCTTCGAACAGCCGTGGGAAGAAGATTTCGGTAAGCCTGAGCGCATTGTCACCGCGCTGGACATCATGACCGAAGGCCCGCTGGGCGGCGCGGCGTTTAACAACGAATTTGGTCGTCCGGCACTGAACGGCTACTTCCGTACTTATGAAGAAAAAGTGAACAGCCACAACGGCGAAGAGCTGCGCGGTTATCACAAACCGATCATGCTGGCGGGCGGGATCGGCAACATTCGCGCCGATCACGTACAAAAAGGCGAGATCAACGTCGGTGCGAAGCTGGTCGTTCTCGGCGGCCCGGCAATGAACATCGGTCTTGGCGGTGGTGCAGCGTCTTCTATGGCGTCTGGTCAGTCTGATGCCGACCTCGACTTTGCTTCCGTACAGCGCGACAACCCGGAGATGGAGCGTCGCTGCCAGGAAGTGATCGACCGTTGCTGGCAGCTTGGTGATGCCAACCCAATCCTGTTTATCCACGACGTTGGCGCTGGCGGTCTTTCTAACGCCATGCCGGAACTGGTGAGCGACGGCGGGCGCGGCGGTAAATTTGAACTGCGCGAGATTCTAAGCGACGAACCGGGCATGAGCCCGCTGGAAATCTGGTGTAACGAATCCCAGGAACGCTACGTGCTGGCGGTTGCTGCCGATCAATTACCGCTGTTTGACGAACTGTGTAAGCGTGAGCGCGCACCCTACGCGGTGATTGGTGAAGCGACCGAAGAACTGCATCTTTCTCTGCACGATCGTCATTTTGATAATCAGCCGATCGATCTGCCGCTGGACGTCCTGCTTGGTAAAACGCCGAAGATGACCCGCGATGTACAAACGCTGAAAGCGAAAGGCGACGCGCTGGCCCGTGAAGGGATCACCATTGCAGACGCGGTGAAACGTGTGCTGCATCTGCCGACTGTGGCGGAAAAAACCTTCCTGGTGACCATTGGCGACCGCAGCGTAACCGGCATGGTAGCGCGCGATCAGATGGTGGGGCCGTGGCAGGTGCCGGTCGCTAACTGCGCGGTCACTACCGCCAGCCTCGACAGCTACTACGGTGAAGCGATGGCGATTGGCGAGCGTGCGCCGGTTGCGCTGCTGGATTTCGCCGCCTCTGCCCGTCTGGCGGTCGGTGAAGCGTTAACCAACATCGCCGCAACACAAATTGGCGATATCAAACGCATCAAACTTTCCGCCAACTGGATGGCGGCGGCAGGCCACCCTGGTGAAGATGCGGGCCTGTATGAAGCCGTTAAAGCCGTGGGCGAAGAGCTTTGTCCGGCGCTGGGCCTGACGATCCCGGTGGGTAAAGACTCCATGTCGATGAAAACCCGCTGGCAGGAAGGTAACGAAGAGCGCGAAATGACGTCGCCGCTGTCGCTGGTGATTTCTGCATTTGCCCGCGTGGAAGATGTACGTCACACCATCACGCCGCAGCTTTCTACCGAAGATAACGCACTGCTGCTGATTGATTTGGGCAAAGGCAATAACGCGCTGGGCGCAACGGCGCTGGCGCAGGTTTATCGTCAGCTTGGCGACAAACCGGCAGATGTACGCGATGTCGCGCAACTGAAAGGCTTCTATGACGCGATTCAGGCGCTGGTTGCACAGCGTAAGCTGCTGGCGTATCACGACCGCTCTGATGGCGGCCTGCTGGTAACGCTGGCGGAAATGGCCTTTGCTGGTCATTGTGGCATTGACGCGGATATCGCCACTCTGGGTGACGATCGCCTGGCGGCGTTGTTTAACGAAGAACTGGGTGCGGTGATTCAGGTTCGTGCCGCTGACCGTGAAGCGGTCGAGTCCGTACTGGCACAGCATGGGCTTGCTGATTGTGTCCATTATGTAGGGCAGGCGGTTTCCGGTGACCGTTTTGTGATTACCGCCAACGGGCAGACTGTATTCAGCGAAAGCCGCACCACGTTGCGTGTCTGGTGGGCAGAAACTACCTGGCAGATGCAGCGCCTGCGTGACAACCCGGAGTGTGCCGATCAGGAGCATCAGGCGAAATCTAACGACGCCGATCCGGGCCTGAATGTAAAACTGTCGTTCGATATCAACGAAGATGTGGCAGCACCGTATATTGCCACTGGCGCACGTCCGAAAGTTGCCGTACTGCGTGAGCAGGGCGTGAACTCGCATGTTGAAATGGCGGCAGCTTTCCACCGTGCAGGCTTTGATGCTATCGACGTGCATATGAGTGACCTGCTGACCGGACGCACGGGCCTGGAAGATTTCCACGCCCTGGTCGCGTGCGGTGGTTTCTCCTACGGTGATGTGCTGGGTGCCGGTGAAGGTTGGGCGAAGTCAATCCTGTTCAATGACCGTGTACGCGATGAGTTTGCAACCTTCTTCCACCGTCCGCAAACGCTGGCGCTGGGGGTATGTAACGGTTGCCAGATGATGTCTAATCTGCGTGAACTGATCCCAGGTAGTGAGTTGTGGCCACGTTTTGTGCGCAATACCTCCGATCGCTTTGAAGCGCGTTTCAGCCTGGTTGAAGTAACCCAAAGCCCGTCTCTGCTGTTGCAGGGGATGGTGGGCTCGCAAATGCCGATTGCTGTCTCTCATGGTGAAGGGCGCGTGGAAGTGCGTGATGCGGCGCATCTGGCGGCACTGGAAAGCAAAGGGCTGGTGGCACTGCGCTATGTCGATAACTTCGGCAAAGTCACTGAAACCTACCCGGCTAACCCGAACGGTTCACCGAACGGTATTACGGCAGTCACGACTGAAAGTGGTCGAGTCACCATTATGATGCCGCACCCGGAACGTGTTTTCCGTACTGTCAGCAACTCCTGGCATCCGGAAAACTGGGGCGAGGATGGCCCATGGATGCGCATTTTCCGCAATGCGCGTAAGCAGTTGGGGTAA", + "dna_sequence_length": 3888, + "functions": [ + "phosphoribosylformyl-glycineamide synthetase" + ], + "id": "CDS_2540", + "location": [ + [ + "NC_000913", + 2695543, + "-", + 3888 + ] + ], + "md5": "10591b577f7a6e9cce87c2470992f9a1", + "parent_gene": "", + "protein_md5": "2b8b93cd99347ca7ff02031505a26bbe", + "protein_translation": "MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLNAPLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQVNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTSVDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCRHKIFNADWVIDGEQQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELREILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGDALAREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAVTTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPLSLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGIDADIATLGDDRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHALVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPERVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG", + "protein_translation_length": 1295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008417" + ], + [ + "gene_synonym", + "ECK2556" + ], + [ + "gene_synonym", + "EcoGene:EG11373" + ], + [ + "gene_synonym", + "GI:171701683" + ], + [ + "gene_synonym", + "GeneID:947028" + ], + [ + "gene_synonym", + "JW2542" + ], + [ + "gene_synonym", + "NP_417053.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC5" + ], + [ + "gene_synonym", + "b2558" + ], + [ + "gene_synonym", + "mltF" + ], + [ + "gene_synonym", + "yfhD" + ] + ], + "dna_sequence": "TTGAAAAAATTAAAGATTAATTATCTGTTCATCGGCATTCTGGCACTGCTGCTCGCGGTCGCTCTCTGGCCATCCATTCCCTGGTTTGGTAAAGCCGACAACCGTATCGCCGCCATTCAAGCGCGGGGAGAGTTGCGTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGGACTTGTCTATAACAGTGAGCGGGTAAAAAATTATCAGCCTGGCCCTACCTATTATTCCGTGTCACAACAACTGGTTTATAAAGTGGGTCAGTATCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATGGCGATAATACCCTTTCCGCCGCCCTGCTCGACTTCTTCAACGAAATGAATGAAGACGGTACGCTGGCACGCATTGAAGAGAAATACCTGGGGCATGGCGATGATTTTGATTACGTCGATACGCGCACATTTTTACGCGCCGTCGATGCGGTACTGCCGCAGTTAAAGCCCCTGTTTGAGAAATACGCCGAAGAAATTGACTGGCGTTTGCTGGCCGCTATTGCTTATCAGGAATCGCACTGGGATGCACAGGCCACTTCACCGACGGGTGTGCGCGGCATGATGATGTTAACCAAAAATACCGCGCAAAGCCTCGGCATTACGGATCGTACCGATGCCGAACAGAGCATCAGCGGTGGCGTGCGTTATTTGCAGGATATGATGAGTAAAGTGCCGGAAAGTGTGCCGGAGAACGAGCGGATCTGGTTTGCCCTCGCTGCGTACAATATGGGCTATGCGCATATGCTGGATGCCCGCGCCCTGACGGCAAAAACCAAAGGGAATCCTGACAGTTGGGCTGACGTAAAACAGCGTCTGCCTTTACTTAGCCAGAAACCCTATTACAGCAAGCTGACTTACGGCTACGCTCGTGGACATGAAGCCTACGCTTATGTCGAAAATATTCGTAAGTATCAGATTAGCCTGGTGGGTTATCTGCAAGAGAAAGAGAAGCAGGCTACAGAAGCGGCGATGCAACTGGCGCAGGATTATCCGGCGGTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAA", + "dna_sequence_length": 1557, + "functions": [ + "membrane-bound lytic transglycosylase F, murein hydrolase" + ], + "id": "CDS_2541", + "location": [ + [ + "NC_000913", + 2695801, + "+", + 1557 + ] + ], + "md5": "9da6d64c7bee2add7d87ac53e8f54fc5", + "parent_gene": "", + "protein_md5": "ef6b00f4eb6a165b0cfcf39e7708feb3", + "protein_translation": "MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN", + "protein_translation_length": 518, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008419" + ], + [ + "gene_synonym", + "ECK2557" + ], + [ + "gene_synonym", + "EcoGene:EG11372" + ], + [ + "gene_synonym", + "GI:145698301" + ], + [ + "gene_synonym", + "GeneID:947027" + ], + [ + "gene_synonym", + "JW2543" + ], + [ + "gene_synonym", + "NP_417054.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68398" + ], + [ + "gene_synonym", + "b2559" + ], + [ + "gene_synonym", + "tadA" + ], + [ + "gene_synonym", + "yfhC" + ] + ], + "dna_sequence": "TTGTCTGAAGTCGAATTTAGCCACGAATACTGGATGCGTCACGCGCTGACGCTGGCGAAACGTGCCTGGGATGAGCGGGAAGTGCCGGTCGGCGCGGTATTAGTGCATAACAATCGGGTAATCGGCGAAGGCTGGAACCGCCCGATTGGTCGCCATGATCCCACCGCACATGCAGAAATCATGGCCCTGCGGCAGGGTGGTCTGGTGATGCAAAATTATCGTCTGATCGACGCCACGTTGTATGTCACGCTTGAACCATGTGTAATGTGTGCCGGAGCGATGATCCACAGTCGCATTGGTCGCGTGGTCTTTGGTGCGCGTGACGCGAAAACTGGCGCTGCGGGATCTTTAATGGATGTGCTGCATCATCCGGGTATGAATCACCGAGTGGAAATTACGGAAGGAATACTGGCGGATGAGTGCGCGGCGTTGCTCAGTGACTTCTTTCGCATGCGCCGCCAGGAAATTAAAGCGCAGAAAAAAGCGCAATCCTCGACGGATTAA", + "dna_sequence_length": 504, + "functions": [ + "tRNA-specific adenosine deaminase" + ], + "id": "CDS_2542", + "location": [ + [ + "NC_000913", + 2697857, + "-", + 504 + ] + ], + "md5": "782338ca990e23df6c3445fb37a39989", + "parent_gene": "", + "protein_md5": "bfbf4b8e66e6d230b32679dffad7d9f0", + "protein_translation": "MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008421" + ], + [ + "gene_synonym", + "ECK2558" + ], + [ + "gene_synonym", + "EcoGene:EG11371" + ], + [ + "gene_synonym", + "GI:90111459" + ], + [ + "gene_synonym", + "GeneID:947026" + ], + [ + "gene_synonym", + "JW5408" + ], + [ + "gene_synonym", + "NP_417055.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD42" + ], + [ + "gene_synonym", + "b2560" + ], + [ + "gene_synonym", + "pgpC" + ], + [ + "gene_synonym", + "yfhB" + ] + ], + "dna_sequence": "TTGGCAACTCACGAGCGTCGTGTGGTGTTTTTTGACTTAGATGGAACATTGCATCAGCAGGATATGTTCGGCAGTTTTCTGCGCTATTTACTACGTCGCCAACCGCTGAATGCGTTACTTGTCCTGCCGTTGTTACCGATTATAGCCATTGCGTTATTGATAAAAGGTCGTGCGGCACGCTGGCCGATGAGTCTGCTTCTGTGGGGGTGCACTTTTGGTCACAGCGAAGCACGTTTACAGACGTTGCAGGCCGATTTCGTGCGCTGGTTTCGCGACAATGTTACCGCCTTTCCGCTGGTTCAGGAGCGATTAACCACCTACCTGTTAAGTTCCGATGCTGATATCTGGTTGATTACCGGCTCTCCGCAGCCGCTGGTTGAAGCGGTTTATTTCGATACGCCCTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTTGTCTGGGACATGAAAAGGTCGCACAACTGGAGCGCAAAATCGGCACTCCGCTGCGGCTGTACAGTGGCTATAGCGACAGTAATCAGGACAATCCGCTGCTTTATTTCTGTCAGCATCGTTGGCGAGTAACCCCGCGCGGTGAACTCCAGCAACTGGAATAG", + "dna_sequence_length": 636, + "functions": [ + "phosphatidylglycerophosphatase C, membrane bound" + ], + "id": "CDS_2543", + "location": [ + [ + "NC_000913", + 2698550, + "-", + 636 + ] + ], + "md5": "7de7a90815532a73d5592c610dcda485", + "parent_gene": "", + "protein_md5": "7d7e164cf8683d8f074f29c7e87f2f08", + "protein_translation": "MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008428" + ], + [ + "gene_synonym", + "ECK2559" + ], + [ + "gene_synonym", + "EcoGene:EG12308" + ], + [ + "gene_synonym", + "GI:90111460" + ], + [ + "gene_synonym", + "GeneID:947030" + ], + [ + "gene_synonym", + "JW2545" + ], + [ + "gene_synonym", + "NP_417056.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37767" + ], + [ + "gene_synonym", + "b2561" + ], + [ + "gene_synonym", + "yfhH" + ] + ], + "dna_sequence": "ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCTATAAAGGTTTTCCGGCGCTTAAGTTGGCGTTGAGTGAAGCGCTGGCAAGCCAGCCGGAATCACCCTCCGTGCCCATTCATAACCAAATCCGCGGTGATGATCCGTTACGGCTGGTCGGCGAAAAACTGATTAAAGAAAATACTGCCGCTATGTACGCAACGCTAAACGTTAATAGTGAAGAGAAACTGCATGAATGCGTAACAATGTTGCGCTCTGCGCGGCGGATAATTCTGACCGGTATTGGCGCTTCGGGTCTGGTGGCGCAAAACTTTGCCTGGAAGCTGATGAAGATTGGCTTCAATGCTGCCGCAGTGCGCGATATGCATGCGCTACTCGCAACAGTACAGGCGTCGTCCCCTGACGATCTGTTATTAGCCATTTCCTACACCGGTGTACGACGCGAGTTAAACCTGGCGGCAGATGAGATGCTGCGAGTGGGCGGAAAAGTGCTGGCGATTACCGGCTTTACTCCGAATGCCCTGCAACAGCGTGCTTCTCATTGCCTGTATACCATTGCCGAAGAACAAGCGACAAACAGTGCTTCAATCTCTGCTTGTCACGCTCAGGGAATGTTAACGGATTTGCTGTTCATTGCGCTGATTCAGCAGGATCTGGAACTGGCACCAGAACGTATTCGTCATAGTGAAGCGCTGGTGAAAAAACTGGTCTGA", + "dna_sequence_length": 849, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2544", + "location": [ + [ + "NC_000913", + 2698759, + "+", + 849 + ] + ], + "md5": "bec5acdac05ab2f34faa9f4bfd10141c", + "parent_gene": "", + "protein_md5": "27f16372a240005d2e2e205f11d1073e", + "protein_translation": "MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008431" + ], + [ + "gene_synonym", + "ECK2560" + ], + [ + "gene_synonym", + "EcoGene:EG13215" + ], + [ + "gene_synonym", + "GI:16130487" + ], + [ + "gene_synonym", + "GeneID:947031" + ], + [ + "gene_synonym", + "JW2546" + ], + [ + "gene_synonym", + "NP_417057.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52102" + ], + [ + "gene_synonym", + "b2562" + ], + [ + "gene_synonym", + "yfhL" + ] + ], + "dna_sequence": "ATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGTACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGCACCACGCGGATAAAATTTAA", + "dna_sequence_length": 261, + "functions": [ + "putative 4Fe-4S cluster-containing protein" + ], + "id": "CDS_2545", + "location": [ + [ + "NC_000913", + 2699663, + "+", + 261 + ] + ], + "md5": "29050e41d950a214efa7447e35108d02", + "parent_gene": "", + "protein_md5": "aafd6e66713fcf0b109289f673d6f7c6", + "protein_translation": "MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4502" + ], + [ + "gene_synonym", + "EcoGene:EG14494" + ], + [ + "gene_synonym", + "GI:226524739" + ], + [ + "gene_synonym", + "GeneID:7751620" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P611" + ], + [ + "gene_synonym", + "YP_002791251.1" + ], + [ + "gene_synonym", + "b4687" + ], + [ + "gene_synonym", + "ryfB" + ], + [ + "gene_synonym", + "shoB" + ], + [ + "gene_synonym", + "yphI" + ] + ], + "dna_sequence": "ATGACTGATTGCCGATACCTGATTAAACGGGTCATCAAAATCATCATTGCTGTTTTACAGCTGATCCTTCTGTTCTTATAA", + "dna_sequence_length": 81, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_2546", + "location": [ + [ + "NC_000913", + 2700197, + "-", + 81 + ] + ], + "md5": "7a6269136f4fb98a1f90490e96ee6b17", + "parent_gene": "", + "protein_md5": "61b0760be71ed84b9c687ca972c6f4ec", + "protein_translation": "MTDCRYLIKRVIKIIIAVLQLILLFL", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008433" + ], + [ + "gene_synonym", + "ECK2561" + ], + [ + "gene_synonym", + "EcoGene:EG10247" + ], + [ + "gene_synonym", + "GI:16130488" + ], + [ + "gene_synonym", + "GeneID:947037" + ], + [ + "gene_synonym", + "JW2547" + ], + [ + "gene_synonym", + "NP_417058.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24224" + ], + [ + "gene_synonym", + "acpS" + ], + [ + "gene_synonym", + "b2563" + ], + [ + "gene_synonym", + "dpj" + ] + ], + "dna_sequence": "ATGGCAATATTAGGTTTAGGCACGGATATTGTGGAGATCGCTCGCATCGAAGCGGTGATCGCCCGATCCGGTGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCTGGCGAAGCGTTTTGCTGTGAAAGAAGCCGCAGCAAAAGCGTTTGGCACCGGGATCCGCAATGGTCTGGCGTTTAATCAATTTGAAGTATTCAATGATGAGCTCGGCAAACCACGGCTACGGCTATGGGGCGAGGCATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAA", + "dna_sequence_length": 381, + "functions": [ + "holo-[acyl-carrier-protein] synthase 1" + ], + "id": "CDS_2547", + "location": [ + [ + "NC_000913", + 2700998, + "-", + 381 + ] + ], + "md5": "f986c61ba3ce32b46adf267515e18cd4", + "parent_gene": "", + "protein_md5": "5d741571fc120864525d08b94a73b46b", + "protein_translation": "MAILGLGTDIVEIARIEAVIARSGDRLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVANMHVTLADERHYACATVIIES", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008435" + ], + [ + "gene_synonym", + "ECK2562" + ], + [ + "gene_synonym", + "EcoGene:EG10693" + ], + [ + "gene_synonym", + "GI:16130489" + ], + [ + "gene_synonym", + "GeneID:947039" + ], + [ + "gene_synonym", + "JW2548" + ], + [ + "gene_synonym", + "NP_417059.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A794" + ], + [ + "gene_synonym", + "b2564" + ], + [ + "gene_synonym", + "pdxJ" + ] + ], + "dna_sequence": "ATGGCTGAATTACTGTTAGGCGTCAACATTGACCATATCGCTACGCTGCGCAACGCGCGCGGTACCGCTTACCCGGATCCGGTGCAGGCCGCGTTTATTGCCGAGCAGGCGGGAGCGGACGGCATTACCGTGCATTTACGTGAAGATCGCCGTCACATTACTGACCGCGACGTGCGCATCCTGCGTCAGACGCTGGATACCCGCATGAATCTGGAGATGGCGGTGACCGAAGAGATGCTGGCGATCGCCGTTGAGACGAAGCCACATTTTTGCTGCCTGGTACCGGAAAAGCGTCAGGAAGTAACAACCGAAGGCGGCCTGGATGTCGCAGGGCAGCGTGACAAAATGCGCGATGCCTGCAAACGTCTGGCAGATGCCGGGATTCAGGTTTCTCTGTTTATTGACGCCGATGAAGAGCAGATCAAAGCTGCGGCAGAGGTTGGCGCACCGTTTATCGAGATCCACACCGGTTGCTATGCTGATGCCAAAACTGACGCCGAACAGGCGCAAGAGCTGGCGCGTATCGCCAAAGCCGCGACCTTTGCCGCAAGCCTCGGTCTGAAAGTTAACGCCGGACACGGTCTGACCTATCACAACGTGAAAGCCATTGCCGCCATCCCTGAGATGCATGAACTGAATATCGGTCATGCCATTATTGGTCGTGCAGTGATGACCGGACTGAAAGATGCGGTGGCAGAAATGAAGCGTCTGATGCTGGAAGCGCGTGGCTAA", + "dna_sequence_length": 732, + "functions": [ + "pyridoxine 5'-phosphate synthase" + ], + "id": "CDS_2548", + "location": [ + [ + "NC_000913", + 2701729, + "-", + 732 + ] + ], + "md5": "ae4bf996ba5b5823477c4934e9ec9ed8", + "parent_gene": "", + "protein_md5": "09824aca3ccb5f945b217d95f424c697", + "protein_translation": "MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008438" + ], + [ + "gene_synonym", + "ECK2563" + ], + [ + "gene_synonym", + "EcoGene:EG10832" + ], + [ + "gene_synonym", + "GI:16130490" + ], + [ + "gene_synonym", + "GeneID:947038" + ], + [ + "gene_synonym", + "JW2549" + ], + [ + "gene_synonym", + "NP_417060.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7H3" + ], + [ + "gene_synonym", + "b2565" + ], + [ + "gene_synonym", + "recO" + ] + ], + "dna_sequence": "ATGGAAGGCTGGCAGCGCGCATTTGTCCTGCATAGTCGCCCGTGGAGCGAAACCAGCCTGATGCTGGACGTCTTCACGGAGGAATCGGGGCGCGTGCGTCTGGTTGCCAAAGGCGCACGCTCTAAACGCTCTACCCTGAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGTGCTGAAGCCGTCTCGCTGGCGCTGCCATTAAGCGGTATCACGCTTTACAGCGGTCTGTACATCAACGAACTTCTCTCCCGCGTACTGGAATACGAGACGCGCTTCTCTGAACTTTTTTTCGATTACTTGCACTGCATTCAGTCTCTTGCAGGGGTCACTGGTACGCCAGAACCCGCGCTGCGCCGCTTTGAACTGGCACTGCTCGGGCATCTGGGTTATGGCGTCAATTTTACCCATTGTGCGGGTAGCGGCGAGCCGGTAGATGACACCATGACGTATCGTTATCGCGAAGAAAAAGGGTTTATCGCAAGCGTCGTTATCGACAATAAAACGTTCACCGGAAGGCAGTTAAAAGCGTTAAACGCACGGGAATTTCCTGACGCAGACACACTGCGCGCCGCGAAACGCTTTACCCGCATGGCGCTTAAGCCGTATCTTGGCGGTAAACCTTTAAAGAGCAGGGAACTGTTCCGGCAGTTTATGCCTAAGCGAACGGTGAAAACACATTATGAATGA", + "dna_sequence_length": 729, + "functions": [ + "gap repair protein" + ], + "id": "CDS_2549", + "location": [ + [ + "NC_000913", + 2702469, + "-", + 729 + ] + ], + "md5": "664a2a5f9353c0d36eb03eb5ac489c0d", + "parent_gene": "", + "protein_md5": "42389b66c69d4b6314aab19100d429a3", + "protein_translation": "MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTHYE", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008440" + ], + [ + "gene_synonym", + "ECK2564" + ], + [ + "gene_synonym", + "EcoGene:EG10270" + ], + [ + "gene_synonym", + "GI:16130491" + ], + [ + "gene_synonym", + "GeneID:947036" + ], + [ + "gene_synonym", + "JW2550" + ], + [ + "gene_synonym", + "NP_417061.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06616" + ], + [ + "gene_synonym", + "b2566" + ], + [ + "gene_synonym", + "era" + ], + [ + "gene_synonym", + "sdgE" + ] + ], + "dna_sequence": "ATGAGCATCGATAAAAGTTACTGCGGATTTATTGCCATCGTCGGACGTCCGAACGTTGGCAAATCCACATTGTTGAACAAACTGCTGGGGCAGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGTGGGGATCCATACTGAAGGCGCGTATCAGGCGATCTACGTCGATACACCGGGCCTGCATATGGAAGAAAAACGCGCCATTAACCGCCTGATGAACAAAGCGGCGAGCAGCTCTATTGGCGATGTTGAGCTGGTGATTTTTGTCGTTGAAGGCACCCGCTGGACGCCGGACGACGAAATGGTGCTCAACAAACTGCGCGAAGGCAAAGCGCCGGTAATCCTCGCGGTGAACAAAGTGGACAACGTGCAGGAGAAAGCCGATCTGCTGCCGCACCTGCAGTTCCTGGCAAGCCAGATGAACTTCCTCGATATCGTGCCAATCTCTGCCGAAACCGGGCTGAATGTTGACACTATTGCGGCAATCGTGCGTAAGCATCTACCTGAAGCGACTCATCACTTCCCGGAAGATTACATCACCGATCGCTCACAGCGTTTTATGGCGTCTGAAATCATCCGCGAAAAACTGATGCGTTTCCTCGGCGCTGAACTGCCGTACTCCGTGACCGTGGAGATCGAACGTTTCGTCTCTAACGAACGCGGTGGTTATGACATCAACGGTTTGATTCTCGTTGAGCGTGAAGGGCAGAAGAAGATGGTCATTGGCAACAAAGGGGCCAAGATCAAAACCATCGGGATTGAAGCGCGTAAAGACATGCAGGAAATGTTCGAAGCGCCTGTTCACCTTGAACTGTGGGTAAAAGTGAAATCCGGTTGGGCCGACGACGAACGCGCACTGCGCAGTCTCGGTTACGTTGACGATCTTTAA", + "dna_sequence_length": 906, + "functions": [ + "membrane-associated, 16S rRNA-binding GTPase" + ], + "id": "CDS_2550", + "location": [ + [ + "NC_000913", + 2703386, + "-", + 906 + ] + ], + "md5": "323db03fdc18eb7d1282a863761b91a2", + "parent_gene": "", + "protein_md5": "adcd2c234c40a28b9de3dc5ebd7053b3", + "protein_translation": "MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDDL", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008448" + ], + [ + "gene_synonym", + "ECK2565" + ], + [ + "gene_synonym", + "EcoGene:EG10857" + ], + [ + "gene_synonym", + "GI:16130492" + ], + [ + "gene_synonym", + "GeneID:947033" + ], + [ + "gene_synonym", + "JW2551" + ], + [ + "gene_synonym", + "NP_417062.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Y0" + ], + [ + "gene_synonym", + "b2567" + ], + [ + "gene_synonym", + "ranA" + ], + [ + "gene_synonym", + "rnc" + ] + ], + "dna_sequence": "ATGAACCCCATCGTAATTAATCGGCTTCAACGGAAGCTGGGCTACACTTTTAATCATCAGGAACTGTTGCAGCAGGCATTAACTCATCGTAGTGCCAGCAGTAAACATAACGAGCGTTTAGAATTTTTAGGCGACTCTATTCTGAGCTACGTTATCGCCAATGCGCTTTATCACCGTTTCCCTCGTGTGGATGAAGGCGATATGAGCCGGATGCGCGCCACGCTGGTCCGTGGCAATACGCTGGCGGAACTGGCGCGCGAATTTGAGTTAGGCGAGTGCTTACGTTTAGGGCCAGGTGAACTTAAAAGCGGTGGATTTCGTCGTGAGTCAATTCTCGCCGACACCGTCGAAGCATTAATTGGTGGCGTATTCCTCGACAGTGATATTCAAACCGTCGAGAAATTAATCCTCAACTGGTATCAAACTCGTTTGGACGAAATTAGCCCAGGCGATAAACAAAAAGATCCGAAAACGCGCTTGCAAGAATATTTGCAGGGTCGCCATCTGCCGCTGCCGACTTATCTGGTAGTCCAGGTACGTGGCGAAGCGCACGATCAGGAATTTACTATCCACTGCCAGGTCAGCGGCCTGAGTGAACCGGTGGTTGGCACAGGTTCAAGCCGTCGTAAGGCTGAGCAGGCTGCCGCCGAACAGGCGTTGAAAAAACTGGAGCTGGAATGA", + "dna_sequence_length": 681, + "functions": [ + "RNase III" + ], + "id": "CDS_2551", + "location": [ + [ + "NC_000913", + 2704063, + "-", + 681 + ] + ], + "md5": "895cbfeb26cab550aa3029e6ff7bde28", + "parent_gene": "", + "protein_md5": "b81a8841be34ad90cf46589e02b5db5e", + "protein_translation": "MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE", + "protein_translation_length": 226, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008450" + ], + [ + "gene_synonym", + "ECK2566" + ], + [ + "gene_synonym", + "EcoGene:EG10530" + ], + [ + "gene_synonym", + "GI:16130493" + ], + [ + "gene_synonym", + "GeneID:947040" + ], + [ + "gene_synonym", + "JW2552" + ], + [ + "gene_synonym", + "NP_417063.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00803" + ], + [ + "gene_synonym", + "b2568" + ], + [ + "gene_synonym", + "lep" + ], + [ + "gene_synonym", + "lepB" + ] + ], + "dna_sequence": "ATGGCGAATATGTTTGCCCTGATTCTGGTGATTGCCACACTGGTGACGGGCATTTTATGGTGCGTGGATAAATTCTTTTTCGCACCTAAACGGCGGGAACGTCAGGCAGCGGCGCAGGCGGCTGCCGGGGACTCACTGGATAAAGCAACGTTGAAAAAGGTTGCGCCGAAGCCTGGCTGGCTGGAAACCGGTGCTTCTGTTTTTCCGGTACTGGCTATCGTATTGATTGTGCGTTCGTTTATTTATGAACCGTTCCAGATCCCGTCAGGTTCGATGATGCCGACTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGCGCGCGGTGGGTTTACCGGGCGATAAAGTCACTTACGATCCGGTCTCAAAAGAGCTGACGATTCAACCGGGATGCAGTTCCGGCCAGGCGTGTGAAAACGCGCTGCCGGTCACCTACTCAAACGTGGAACCGAGCGATTTCGTTCAGACCTTCTCACGCCGTAATGGTGGGGAAGCGACCAGCGGATTCTTTGAAGTGCCGAAAAACGAAACCAAAGAAAATGGAATTCGTCTTTCCGAGCGTAAAGAGACACTGGGTGATGTGACGCACCGCATTCTGACAGTGCCGATTGCGCAGGATCAGGTGGGGATGTATTACCAGCAGCCAGGGCAACAACTGGCAACCTGGATTGTTCCTCCGGGACAATACTTCATGATGGGCGACAACCGCGACAACAGCGCGGACAGCCGTTACTGGGGCTTTGTGCCGGAAGCGAATCTGGTCGGTCGGGCAACGGCTATCTGGATGAGCTTCGATAAGCAAGAAGGCGAATGGCCGACTGGTCTGCGCTTAAGTCGCATTGGCGGCATCCATTAA", + "dna_sequence_length": 975, + "functions": [ + "leader peptidase (signal peptidase I)" + ], + "id": "CDS_2552", + "location": [ + [ + "NC_000913", + 2705309, + "-", + 975 + ] + ], + "md5": "9a32b42f7eef40045c5bea91a3df9438", + "parent_gene": "", + "protein_md5": "90522cfe810e9d803f7139007dd292c4", + "protein_translation": "MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008452" + ], + [ + "gene_synonym", + "ECK2567" + ], + [ + "gene_synonym", + "EcoGene:EG10529" + ], + [ + "gene_synonym", + "GI:16130494" + ], + [ + "gene_synonym", + "GeneID:947051" + ], + [ + "gene_synonym", + "JW2553" + ], + [ + "gene_synonym", + "NP_417064.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60785" + ], + [ + "gene_synonym", + "b2569" + ], + [ + "gene_synonym", + "lepA" + ] + ], + "dna_sequence": "ATGAAGAATATACGTAACTTTTCGATCATAGCTCACATTGACCACGGTAAATCGACGCTGTCTGACCGTATTATCCAGATCTGCGGTGGCCTGTCTGACCGTGAAATGGAGGCGCAGGTTCTCGATTCCATGGATCTTGAGCGTGAGCGTGGCATTACCATCAAAGCGCAAAGCGTGACGCTGGACTACAAAGCGTCTGACGGCGAAACCTATCAGCTTAACTTTATCGACACCCCGGGCCACGTAGACTTCTCCTATGAAGTTTCCCGTTCGCTGGCTGCCTGTGAAGGTGCATTGCTGGTGGTCGACGCCGGGCAGGGCGTAGAAGCGCAAACCCTGGCAAACTGCTACACCGCCATGGAAATGGATCTCGAAGTTGTGCCGGTACTGAACAAGATTGACCTGCCGGCAGCCGATCCTGAACGCGTGGCGGAAGAAATTGAAGATATCGTCGGCATCGACGCCACCGACGCGGTGCGCTGTTCAGCGAAAACCGGCGTTGGTGTGCAGGACGTTCTCGAACGTCTGGTGCGCGACATTCCGCCGCCGGAAGGCGATCCGGAAGGCCCGTTGCAGGCACTAATTATCGACTCATGGTTCGACAACTACCTGGGCGTTGTTTCACTTATCCGTATTAAAAACGGCACCCTGCGTAAGGGCGACAAAGTGAAAGTCATGAGTACCGGGCAGACCTATAACGCCGACCGTCTGGGCATCTTCACGCCGAAACAGGTTGACCGCACTGAACTGAAATGTGGCGAAGTAGGCTGGCTCGTATGTGCGATTAAAGATATCCACGGCGCTCCAGTCGGCGATACCTTAACGCTGGCGCGTAATCCGGCAGAAAAGGCGCTGCCTGGCTTTAAGAAAGTCAAACCGCAGGTATACGCCGGTCTGTTCCCGGTAAGTTCCGACGACTATGAAGCCTTCCGTGACGCGCTGGGTAAACTCAGCCTGAACGATGCCTCACTGTTCTATGAGCCGGAAAGCTCCAGCGCGCTGGGCTTTGGTTTCCGCTGCGGCTTCCTCGGCCTGCTGCACATGGAGATCATCCAGGAACGTCTGGAACGTGAATACGATCTGGATCTGATCACCACTGCGCCGACCGTAGTGTATGAAGTTGAAACCACGTCAAGAGAAGTTATCTACGTCGACAGCCCATCCAAGCTGCCTGCGGTAAATAACATCTACGAACTGCGCGAGCCGATTGCAGAGTGTCACATGCTGCTGCCGCAGGCATATCTCGGCAACGTTATTACGTTGTGCGTAGAAAAACGCGGCGTGCAGACCAATATGGTTTACCACGGTAATCAGGTGGCGCTGACGTACGAGATCCCGATGGCGGAAGTGGTGCTCGACTTCTTCGATCGCCTGAAATCTACCTCGCGTGGTTATGCGTCTCTGGATTACAACTTCAAGCGCTTCCAGGCGTCCGACATGGTACGTGTAGACGTATTAATCAACGGTGAACGTGTTGATGCGCTGGCGTTGATCACCCACCGTGATAATTCGCAAAACCGCGGTCGCGAGTTGGTGGAGAAGATGAAAGATCTGATCCCACGCCAGCAGTTTGATATCGCCATTCAGGCAGCGATTGGTACGCACATCATTGCGCGATCCACCGTGAAACAGCTGCGTAAAAACGTACTGGCTAAATGTTATGGCGGCGATATCAGCCGTAAGAAAAAGCTGCTGCAGAAGCAGAAAGAAGGTAAGAAACGCATGAAGCAGATCGGTAACGTCGAGCTGCCGCAGGAAGCGTTCCTCGCCATTCTGCACGTCGGCAAAGACAACAAATAA", + "dna_sequence_length": 1800, + "functions": [ + "back-translocating elongation factor EF4, GTPase" + ], + "id": "CDS_2553", + "location": [ + [ + "NC_000913", + 2707124, + "-", + 1800 + ] + ], + "md5": "736b63bed0bb4411d12411f1e790927c", + "parent_gene": "", + "protein_md5": "7201463f2ac9afc8df98af3c39a9de8f", + "protein_translation": "MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK", + "protein_translation_length": 599, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008457" + ], + [ + "gene_synonym", + "ECK2568" + ], + [ + "gene_synonym", + "EcoGene:EG13178" + ], + [ + "gene_synonym", + "GI:16130495" + ], + [ + "gene_synonym", + "GeneID:947052" + ], + [ + "gene_synonym", + "JW2554" + ], + [ + "gene_synonym", + "NP_417065.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46187" + ], + [ + "gene_synonym", + "b2570" + ], + [ + "gene_synonym", + "rseC" + ] + ], + "dna_sequence": "ATGATCAAAGAGTGGGCTACCGTCGTCTCCTGGCAAAACGGGCAGGCGCTGGTCAGTTGTGATGTTAAAGCTTCATGCAGCAGCTGCGCTTCACGCGCCGGTTGCGGTAGCCGCGTGTTAAATAAACTTGGCCCGCAAACCACGCATACCATTGTCGTACCCTGTGATGAGCCGTTAGTGCCGGGGCAAAAAGTGGAATTGGGGATCGCCGAAGGCAGCCTGCTTAGCTCCGCATTACTGGTTTATATGTCGCCGCTGGTGGGATTATTCCTTATCGCTTCGCTATTTCAGCTACTCTTTGCTTCTGACGTCGCAGCATTATGTGGTGCGATCCTCGGTGGTATTGGCGGGTTCCTGATTGCGCGCGGCTACTCGCGTAAGTTTGCTGCCCGGGCAGAATGGCAACCGATCATCTTAAGCGTGGCATTGCCGCCTGGCCTTGTGCGATTTGAAACATCTTCGGAAGACGCGAGCCAGTGA", + "dna_sequence_length": 480, + "functions": [ + "SoxR iron-sulfur cluster reduction factor component" + ], + "id": "CDS_2554", + "location": [ + [ + "NC_000913", + 2707801, + "-", + 480 + ] + ], + "md5": "35faa66af19f1dadd00182f81d1b22af", + "parent_gene": "", + "protein_md5": "1c27f669ed8650035a7406302163535c", + "protein_translation": "MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008459" + ], + [ + "gene_synonym", + "ECK2569" + ], + [ + "gene_synonym", + "EcoGene:EG13177" + ], + [ + "gene_synonym", + "GI:16130496" + ], + [ + "gene_synonym", + "GeneID:947054" + ], + [ + "gene_synonym", + "JW2555" + ], + [ + "gene_synonym", + "NP_417066.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFX9" + ], + [ + "gene_synonym", + "b2571" + ], + [ + "gene_synonym", + "rseB" + ] + ], + "dna_sequence": "ATGAAGCAACTTTGGTTTGCCATGTCATTAGTGACAGGTAGCCTGTTATTCTCTGCTAACGCCTCGGCCACTCCCGCGTCCGGGGCGTTATTACAGCAGATGAACCTGGCCAGTCAGTCACTGAATTACGAGCTGTCATTCATCAGCATCAATAAACAGGGTGTTGAGTCTCTGCGTTATCGACATGCACGCCTCGATAACCGTCCTCTTGCACAATTGTTGCAAATGGATGGCCCGCGCCGGGAAGTGGTACAGCGCGGCAATGAAATCAGCTATTTTGAACCGGGACTTGAACCGTTCACGCTTAATGGCGATTACATTGTTGATTCTCTGCCATCGCTTATCTATACCGATTTCAAACGCCTTTCTCCTTACTACGACTTTATCTCCGTCGGGCGCACGCGTATTGCTGATCGTCTTTGCGAAGTCATTCGCGTGGTTGCCCGAGATGGTACACGCTACAGCTACATCGTGTGGATGGACACCGAATCGAAATTACCGATGCGGGTTGATCTCCTTGATCGCGATGGTGAAACGCTGGAACAATTTCGCGTGATTGCTTTTAACGTCAATCAGGATATCAGCAGCAGTATGCAGACGCTGGCGAAGGCAAATTTGCCGCCGTTGCTTTCTGTTCCTGTAGGTGAAAAAGCTAAATTCAGCTGGACGCCAACCTGGTTGCCACAGGGTTTTAGCGAAGTTTCCAGTAGTCGACGTCCGCTACCGACGATGGACAACATGCCTATCGAATCACGTCTCTATTCCGACGGATTATTCAGCTTCTCGGTAAACGTTAACCGCGCTACGCCATCGAGCACCGATCAGATGTTGCGCACCGGACGCAGAACCGTCAGTACAAGCGTACGTGATAACGCCGAAATCACCATTGTCGGTGAACTGCCGCCGCAAACGGCGAAACGCATTGCCGAGAATATTAAGTTCGGGGCAGCGCAATGA", + "dna_sequence_length": 957, + "functions": [ + "anti-sigma E factor, binds RseA" + ], + "id": "CDS_2555", + "location": [ + [ + "NC_000913", + 2708754, + "-", + 957 + ] + ], + "md5": "0d828a4b8c01916c6d748b21cc133b94", + "parent_gene": "", + "protein_md5": "6a47864645205b02d31d4491088179b7", + "protein_translation": "MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008462" + ], + [ + "gene_synonym", + "ECK2570" + ], + [ + "gene_synonym", + "EcoGene:EG12341" + ], + [ + "gene_synonym", + "GI:16130497" + ], + [ + "gene_synonym", + "GeneID:947053" + ], + [ + "gene_synonym", + "JW2556" + ], + [ + "gene_synonym", + "NP_417067.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFX7" + ], + [ + "gene_synonym", + "b2572" + ], + [ + "gene_synonym", + "mclA" + ], + [ + "gene_synonym", + "rseA" + ], + [ + "gene_synonym", + "yfiJ" + ] + ], + "dna_sequence": "ATGCAGAAAGAACAACTTTCCGCTTTAATGGATGGCGAAACGCTGGATAGTGAGCTGCTTAACGAACTGGCTCATAACCCAGAAATGCAGAAAACCTGGGAAAGCTATCACTTAATCCGTGACTCAATGCGGGGTGATACTCCCGAGGTGCTCCATTTCGATATCTCTTCACGCGTGATGGCCGCCATTGAAGAAGAGCCAGTACGTCAACCGGCGACATTGATCCCGGAAGCCCAGCCTGCGCCGCATCAATGGCAGAAAATGCCATTCTGGCAGAAAGTACGTCCGTGGGCGGCACAGCTTACCCAAATGGGCGTAGCCGCATGCGTATCGCTTGCAGTTATCGTTGGCGTCCAGCACTATAATGGACAATCTGAAACGTCCCAGCAGCCCGAAACGCCGGTATTTAATACACTGCCGATGATGGGTAAAGCCAGCCCGGTAAGCCTGGGAGTACCTTCTGAAGCGACCGCAAACAATGGTCAACAGCAGCAGGTACAGGAGCAGCGTCGTCGCATTAATGCAATGTTGCAGGATTACGAACTGCAACGCCGACTCCACTCTGAACAGCTTCAGTTTGAGCAGGCGCAAACCCAGCAAGCCGCTGTACAGGTGCCAGGAATTCAAACTTTAGGAACGCAATCGCAGTAA", + "dna_sequence_length": 651, + "functions": [ + "anti-sigma factor" + ], + "id": "CDS_2556", + "location": [ + [ + "NC_000913", + 2709404, + "-", + 651 + ] + ], + "md5": "f8c71bf119421b724dd17dc42a9c5a54", + "parent_gene": "", + "protein_md5": "802a622f16887530be1ab825e4ad3e5c", + "protein_translation": "MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008467" + ], + [ + "gene_synonym", + "ECK2571" + ], + [ + "gene_synonym", + "EcoGene:EG11897" + ], + [ + "gene_synonym", + "GI:16130498" + ], + [ + "gene_synonym", + "GeneID:947050" + ], + [ + "gene_synonym", + "JW2557" + ], + [ + "gene_synonym", + "NP_417068.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGB6" + ], + [ + "gene_synonym", + "b2573" + ], + [ + "gene_synonym", + "rpoE" + ], + [ + "gene_synonym", + "sigE" + ] + ], + "dna_sequence": "ATGAGCGAGCAGTTAACGGACCAGGTCCTGGTTGAACGGGTCCAGAAGGGAGATCAGAAAGCCTTTAACTTACTGGTAGTGCGCTATCAGCATAAAGTGGCGAGTCTGGTTTCCCGCTATGTGCCGTCGGGTGATGTTCCCGATGTGGTACAAGAAGCTTTTATTAAAGCCTATCGTGCGCTGGATTCGTTCCGGGGAGATAGCGCTTTTTATACATGGCTGTATCGGATTGCTGTAAATACAGCGAAAAATTACCTGGTTGCTCAGGGGCGTCGTCCACCTTCCAGTGATGTGGATGCCATTGAAGCTGAAAACTTCGAAAGTGGCGGCGCGTTGAAAGAAATTTCGAACCCTGAGAACTTAATGTTGTCAGAAGAACTGAGACAGATAGTTTTCCGAACTATTGAGTCCCTCCCGGAAGATTTACGCATGGCAATAACCTTGCGGGAGCTGGATGGCCTGAGCTATGAAGAGATAGCCGCTATCATGGATTGTCCGGTAGGTACGGTGCGTTCACGTATCTTCCGAGCGAGGGAAGCTATTGATAACAAAGTTCAACCGCTTATCAGGCGTTGA", + "dna_sequence_length": 576, + "functions": [ + "RNA polymerase sigma E factor" + ], + "id": "CDS_2557", + "location": [ + [ + "NC_000913", + 2710012, + "-", + 576 + ] + ], + "md5": "88f601b40f0424431a2c577270733a37", + "parent_gene": "", + "protein_md5": "cbc71f42bfa9d5ba628fd0f044c0b4df", + "protein_translation": "MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008471" + ], + [ + "gene_synonym", + "ECK2572" + ], + [ + "gene_synonym", + "EcoGene:EG10631" + ], + [ + "gene_synonym", + "GI:16130499" + ], + [ + "gene_synonym", + "GeneID:947049" + ], + [ + "gene_synonym", + "JW2558" + ], + [ + "gene_synonym", + "NP_417069.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10902" + ], + [ + "gene_synonym", + "b2574" + ], + [ + "gene_synonym", + "nadB" + ], + [ + "gene_synonym", + "nic" + ], + [ + "gene_synonym", + "nicB" + ] + ], + "dna_sequence": "ATGAATACTCTCCCTGAACATTCATGTGACGTGTTGATTATCGGTAGCGGCGCAGCCGGACTTTCACTGGCGCTACGCCTGGCTGACCAGCATCAGGTCATCGTTCTAAGTAAAGGCCCGGTAACGGAAGGTTCAACATTTTATGCCCAGGGCGGTATTGCCGCCGTGTTTGATGAAACTGACAGCATTGACTCGCATGTGGAAGACACATTGATTGCCGGGGCTGGTATTTGCGATCGCCATGCAGTTGAATTTGTCGCCAGCAATGCACGATCCTGTGTGCAATGGCTAATCGACCAGGGGGTGTTGTTTGATACCCACATTCAACCGAATGGCGAAGAAAGTTACCATCTGACCCGTGAAGGTGGACATAGTCACCGTCGTATTCTTCATGCCGCCGACGCCACCGGTAGAGAAGTAGAAACCACGCTGGTGAGCAAGGCGCTGAACCATCCGAATATTCGCGTGCTGGAGCGCAGCAACGCGGTTGATCTGATTGTTTCTGACAAAATTGGCCTGCCGGGCACGCGACGGGTTGTTGGCGCGTGGGTATGGAACCGTAATAAAGAAACGGTGGAAACCTGCCACGCAAAAGCGGTGGTGCTGGCAACCGGCGGTGCGTCGAAGGTTTATCAGTACACCACCAATCCGGATATTTCTTCTGGCGATGGCATTGCTATGGCGTGGCGCGCAGGCTGCCGGGTTGCCAATCTCGAATTTAATCAGTTCCACCCTACCGCGCTATATCACCCACAGGCACGCAATTTCCTGTTAACAGAAGCACTGCGCGGCGAAGGCGCTTATCTCAAGCGCCCGGATGGTACGCGTTTTATGCCCGATTTTGATGAGCGCGGCGAACTGGCCCCGCGCGATATTGTCGCCCGCGCCATTGACCATGAAATGAAACGCCTCGGCGCAGATTGTATGTTCCTTGATATCAGCCATAAGCCCGCCGATTTTATTCGCCAGCATTTCCCGATGATTTATGAAAAGCTGCTCGGGCTGGGGATTGATCTCACACAAGAACCGGTACCGATTGTGCCTGCTGCACATTATACCTGCGGTGGTGTAATGGTTGATGATCATGGGCGTACGGACGTCGAGGGCTTGTATGCCATTGGCGAGGTGAGTTATACCGGCTTACACGGCGCTAACCGCATGGCCTCGAATTCATTGCTGGAGTGTCTGGTCTATGGCTGGTCGGCGGCGGAAGATATCACCAGACGTATGCCTTATGCCCACGACATCAGTACGTTACCGCCGTGGGATGAAAGCCGCGTTGAGAACCCTGACGAACGGGTAGTAATTCAGCATAACTGGCACGAGCTACGTCTGTTTATGTGGGATTACGTTGGCATTGTGCGCACAACGAAGCGCCTGGAACGCGCCCTGCGGCGGATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCGTCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGCAATGATGCGTAAAGAGAGTCGGGGGTTGCATTTCACGCTGGATTATCCGGAACTGCTCACCCATTCCGGTCCGTCGATCCTTTCCCCCGGCAATCATTACATAAACAGATAA", + "dna_sequence_length": 1623, + "functions": [ + "quinolinate synthase, L-aspartate oxidase (B protein) subunit" + ], + "id": "CDS_2558", + "location": [ + [ + "NC_000913", + 2710420, + "+", + 1623 + ] + ], + "md5": "d6dc08f16649011fe62e8c982028d071", + "parent_gene": "", + "protein_md5": "5032b65d1cea4cc0501af1d179a93673", + "protein_translation": "MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSPGNHYINR", + "protein_translation_length": 540, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008473" + ], + [ + "gene_synonym", + "ECK2573" + ], + [ + "gene_synonym", + "EcoGene:EG11538" + ], + [ + "gene_synonym", + "GI:90111461" + ], + [ + "gene_synonym", + "GeneID:947047" + ], + [ + "gene_synonym", + "JW2559" + ], + [ + "gene_synonym", + "NP_417070.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31825" + ], + [ + "gene_synonym", + "b2575" + ], + [ + "gene_synonym", + "trmN" + ], + [ + "gene_synonym", + "trmN6" + ], + [ + "gene_synonym", + "yfiC" + ] + ], + "dna_sequence": "ATGTCACAGTCTACATCCGTGCTTCGTCGTAATGGATTTACTTTTAAACAGTTTTTTGTTGCTCACGATCGCTGTGCGATGAAAGTGGGAACGGATGGTATTTTATTGGGCGCATGGGCACCGGTGGCTGGGGTAAAACGTTGCCTTGATATCGGCGCGGGTAGCGGGTTGCTGGCATTAATGCTGGCGCAGCGAACCGATGACAGCGTGATGATTGATGCAGTTGAACTGGAAAGTGAAGCTGCCGCGCAGGCGCAGGAAAATATCAACCAGTCCCCGTGGGCAGAGCGGATTAACGTCCATACGGCGGATATTCAGCAGTGGATCACACAGCAGACAGTACGCTTCGATTTAATCATCAGTAACCCACCTTACTATCAGCAGGGAGTAGAGTGCTCGACACCTCAACGGGAACAGGCTCGCTATACCACTACGCTTGATCACCCATCGTTGCTGACCTGTGCGGCGGAGTGCATTACCGAAGAGGGATTTTTCTGCGTAGTGCTGCCAGAGCAGATTGGTAATGGTTTTACGGAGCTGGCATTAAGCATGGGCTGGCATTTACGTTTGCGGACGGATGTGGCGGAAAACGAAGCGCGACTGCCGCATCGGGTGCTGCTGGCATTCTCCCCGCAGGCGGGAGAATGCTTTAGCGATCGCTTAGTCATTCGTGGGCCAGACCAGAACTATTCCGAAGCGTATACGGCGCTGACCCAGGCTTTTTATCTGTTTATGTAA", + "dna_sequence_length": 738, + "functions": [ + "tRNA1(Val) (adenine(37)-N6)-methyltransferase" + ], + "id": "CDS_2559", + "location": [ + [ + "NC_000913", + 2712764, + "-", + 738 + ] + ], + "md5": "2fd3e464d42d8122e6ea32e6a4a8e34a", + "parent_gene": "", + "protein_md5": "b8672ff2ac54aece971fef3de6ae292e", + "protein_translation": "MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008478" + ], + [ + "gene_synonym", + "ECK2574" + ], + [ + "gene_synonym", + "EcoGene:EG10975" + ], + [ + "gene_synonym", + "GI:16130501" + ], + [ + "gene_synonym", + "GeneID:947055" + ], + [ + "gene_synonym", + "JW2560" + ], + [ + "gene_synonym", + "NP_417071.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21507" + ], + [ + "gene_synonym", + "b2576" + ], + [ + "gene_synonym", + "rbaB" + ], + [ + "gene_synonym", + "rhlA" + ], + [ + "gene_synonym", + "srmB" + ] + ], + "dna_sequence": "ATGACTGTAACGACTTTTTCCGAACTTGAACTCGACGAAAGCCTGCTGGAAGCCCTCCAGGATAAAGGTTTCACTCGCCCGACCGCCATTCAGGCTGCCGCCATTCCGCCTGCGCTCGATGGCCGTGATGTACTCGGTTCTGCGCCGACAGGCACCGGTAAAACGGCGGCGTATCTGCTGCCAGCGTTGCAGCACCTGCTCGATTTCCCGCGTAAGAAATCCGGTCCGCCGCGTATTTTGATCCTCACCCCAACTCGCGAGCTGGCGATGCAGGTGTCCGATCATGCCCGCGAACTGGCGAAACATACGCATCTGGATATCGCCACCATCACCGGCGGCGTAGCCTATATGAACCACGCGGAAGTGTTCAGCGAAAATCAGGACATCGTGGTCGCCACGACCGGACGTCTGCTGCAATACATAAAAGAAGAGAACTTCGATTGCCGCGCGGTTGAAACGCTGATCCTCGACGAAGCAGACCGTATGCTGGATATGGGCTTCGCTCAGGATATCGAACATATTGCTGGCGAAACGCGCTGGCGTAAACAGACCCTGCTCTTTTCGGCAACGCTGGAAGGCGATGCGATTCAGGACTTTGCCGAGCGTCTGCTGGAAGATCCGGTGGAAGTTTCTGCCAATCCCTCCACCCGTGAGCGCAAAAAAATTCATCAGTGGTATTACCGCGCCGATGATCTTGAGCATAAAACCGCGTTGCTGGTGCATCTGTTAAAACAGCCGGAAGCGACCCGCTCAATTGTGTTTGTGCGTAAGCGTGAGCGTGTGCATGAGCTGGCAAACTGGCTGCGCGAAGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTGGGTAAAGTAGGCCGCTATATTGAAGAGCCAATTAAAGCTCGCGTTATTGATGAGTTACGCCCGAAAACGCGTGCGCCAAGCGAAAAGCAGACCGGCAAGCCATCGAAGAAAGTACTGGCTAAACGTGCTGAGAAGAAAAAAGCTAAAGAGAAAGAGAAGCCGCGGGTGAAAAAACGCCATCGCGACACCAAAAATATTGGTAAGCGCCGTAAACCAAGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAA", + "dna_sequence_length": 1335, + "functions": [ + "ATP-dependent RNA helicase" + ], + "id": "CDS_2560", + "location": [ + [ + "NC_000913", + 2712896, + "+", + 1335 + ] + ], + "md5": "fd34dee79ff760ea1efc3d24c0d08a69", + "parent_gene": "", + "protein_md5": "1f2107a654c7249a1ecb0304f17fb7f7", + "protein_translation": "MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE", + "protein_translation_length": 444, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008483" + ], + [ + "gene_synonym", + "ECK2575" + ], + [ + "gene_synonym", + "EcoGene:EG11785" + ], + [ + "gene_synonym", + "GI:90111462" + ], + [ + "gene_synonym", + "GeneID:947064" + ], + [ + "gene_synonym", + "JW2561" + ], + [ + "gene_synonym", + "NP_417072.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33634" + ], + [ + "gene_synonym", + "b2577" + ], + [ + "gene_synonym", + "yfiE" + ] + ], + "dna_sequence": "ATGGATCTGCGCCGTTTTATTACGCTTAAAACCGTGGTGGAAGAGGGTTCCTTTTTGCGAGCTTCGCAAAAATTGTGCTGTACACAATCGACGGTGACTTTTCATATTCAGCAGCTTGAGCAGGAGTTTTCAGTCCAGTTATTTGAGAAAATTGGCCGACGGATGTGCCTTACCCGCGAAGGAAAAAAGTTGCTGCCGCACATTTATGAACTTACCCGAGTGATGGATACGCTTCGTGAGGCTGCCAAAAAGGAGTCAGATCCGGACGGGGAACTACGCGTTGTTTCGGGCGAAACGTTGCTCTCTTACCGAATGCCGCAGGTGTTGCAGCGTTTTCGGCAACGCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAACTGTTACGTGATCCGTGATGCGCTACTGAATGATGAGGCCGATGTTGGCGTCTTTTATCGTGTAGGGAATGATGATGCTCTGAATCGACGAGAGTTGGGTGAACAATCACTGGTGCTGGTGGCTTCACCGCAAATTGCAGATGTCGATTTTACTGAGCCGGGAAGACATAACGCCTGTAGCTTTATTATCAACGAACCGCAATGTGTCTTCCGGCAGATATTTGAGAGCACGCTGCGTCAGCGGCGGATCACGGTGGAAAACACCATTGAGCTTATAAGTATCGAAAGCATCAAGCGTTGTGTCGCGGCGAATATCGGGGTCAGCTACCTACCGCGCTTTGCGGTGGCAAAAGAGTTGGAGTGCGGAGAATTAATTGAATTGCCTTTTGGCGAACAGTCGCAGACCATTACGGCCATGTGCGCACATCATGCTGGAAAAGCGGTTAGCCCGGCGATGCACACTTTTATTCAGTGTGTTGAAGAGAGTTTTGTGGCTGGATAA", + "dna_sequence_length": 882, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2561", + "location": [ + [ + "NC_000913", + 2715320, + "-", + 882 + ] + ], + "md5": "a1d08ea166aa44575ec03c6b27667676", + "parent_gene": "", + "protein_md5": "6cc9f11ddd8e3e2a0b52af9b4aa6a597", + "protein_translation": "MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFSVQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELGEQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCVEESFVAG", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008487" + ], + [ + "gene_synonym", + "ECK2576" + ], + [ + "gene_synonym", + "EcoGene:EG12445" + ], + [ + "gene_synonym", + "GI:16130503" + ], + [ + "gene_synonym", + "GeneID:947065" + ], + [ + "gene_synonym", + "JW2562" + ], + [ + "gene_synonym", + "NP_417073.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38101" + ], + [ + "gene_synonym", + "b2578" + ], + [ + "gene_synonym", + "eamB" + ], + [ + "gene_synonym", + "yfiK" + ] + ], + "dna_sequence": "GTGACACCGACCCTTTTAAGTGCTTTTTGGACTTACACCCTGATTACCGCTATGACGCCAGGACCGAACAATATTCTCGCCCTTAGCTCTGCTACGTCGCATGGATTTCGTCAAAGTACCCGCGTGCTGGCAGGGATGAGTCTGGGATTTTTGATTGTGATGTTACTGTGTGCGGGCATTTCATTTTCACTGGCAGTGATTGACCCGGCAGCGGTACACCTTTTGAGTTGGGCGGGGGCGGCATATATTGTCTGGCTGGCGTGGAAAATCGCCACCAGCCCAACAAAGGAAGACGGACTTCAGGCAAAACCAATCAGCTTTTGGGCCAGCTTTGCTTTGCAGTTTGTGAACGTCAAAATCATTTTGTACGGTGTTACGGCACTGTCGACGTTTGTTCTGCCGCAAACACAGGCGTTAAGCTGGGTAGTTGGCGTCAGCGTTTTGCTGGCGATGATTGGGACGTTTGGCAATGTGTGCTGGGCGCTGGCGGGGCATCTGTTTCAGCGATTGTTTCGCCAGTATGGTCGCCAGTTAAATATCGTGCTTGCCCTGTTGCTGGTCTATTGCGCGGTACGCATTTTCTATTAA", + "dna_sequence_length": 588, + "functions": [ + "cysteine and O-acetylserine exporter" + ], + "id": "CDS_2562", + "location": [ + [ + "NC_000913", + 2715423, + "+", + 588 + ] + ], + "md5": "8aa05650016a3e47c47fc2f391bf2649", + "parent_gene": "", + "protein_md5": "1c539ae0f9b09fc114fce2bcb5d60cc5", + "protein_translation": "MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008489" + ], + [ + "gene_synonym", + "ECK2577" + ], + [ + "gene_synonym", + "EcoGene:EG11784" + ], + [ + "gene_synonym", + "GI:16130504" + ], + [ + "gene_synonym", + "GeneID:947068" + ], + [ + "gene_synonym", + "JW2563" + ], + [ + "gene_synonym", + "NP_417074.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68066" + ], + [ + "gene_synonym", + "b2579" + ], + [ + "gene_synonym", + "grcA" + ], + [ + "gene_synonym", + "yfiD" + ] + ], + "dna_sequence": "ATGATTACAGGTATCCAGATTACTAAAGCCGCTAACGACGATCTGCTGAACTCTTTCTGGCTGCTGGACAGCGAAAAAGGCGAAGCGCGTTGCATCGTTGCAAAAGCAGGTTATGCAGAAGATGAAGTGGTTGCAGTAAGCAAACTGGGTGACATTGAATACCGTGAAGTTCCAGTAGAAGTGAAACCAGAAGTTCGCGTTGAAGGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGCGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAAAGCCTGTAA", + "dna_sequence_length": 384, + "functions": [ + "autonomous glycyl radical cofactor" + ], + "id": "CDS_2563", + "location": [ + [ + "NC_000913", + 2716449, + "-", + 384 + ] + ], + "md5": "ebab599d07f498eef9348c9c1f81b7b5", + "parent_gene": "", + "protein_md5": "af241637a7d03f318284ba8a7d712c26", + "protein_translation": "MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008495" + ], + [ + "gene_synonym", + "ECK2578" + ], + [ + "gene_synonym", + "EcoGene:EG11058" + ], + [ + "gene_synonym", + "GI:16130505" + ], + [ + "gene_synonym", + "GeneID:947067" + ], + [ + "gene_synonym", + "JW2564" + ], + [ + "gene_synonym", + "NP_417075.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12295" + ], + [ + "gene_synonym", + "b2580" + ], + [ + "gene_synonym", + "ung" + ] + ], + "dna_sequence": "ATGGCTAACGAATTAACCTGGCATGACGTGCTGGCTGAAGAGAAGCAGCAACCCTATTTTCTTAATACCCTTCAGACCGTCGCCAGCGAGCGGCAGTCCGGCGTCACTATCTACCCACCACAAAAAGATGTCTTTAACGCGTTCCGCTTTACAGAGTTGGGTGACGTTAAAGTGGTGATTCTCGGCCAGGATCCTTATCACGGACCGGGACAGGCGCATGGTCTGGCATTTTCCGTTCGTCCCGGCATTGCCATTCCTCCGTCATTATTGAATATGTATAAAGAGCTGGAAAATACTATTCCGGGCTTCACCCGCCCTAATCATGGTTATCTTGAAAGCTGGGCGCGTCAGGGCGTTCTGCTACTCAATACTGTGTTGACGGTACGCGCAGGTCAGGCGCATTCCCACGCCAGCCTCGGCTGGGAAACCTTCACCGATAAAGTGATCAGCCTGATTAACCAGCATCGCGAAGGCGTGGTGTTTTTGTTGTGGGGATCGCATGCGCAAAAGAAAGGGGCGATTATAGATAAGCAACGCCATCATGTACTGAAAGCACCGCATCCGTCGCCGCTTTCGGCGCATCGTGGATTCTTTGGCTGCAACCATTTTGTGCTGGCAAATCAGTGGCTGGAACAACGTGGCGAGACGCCGATTGACTGGATGCCAGTATTACCGGCAGAGAGTGAGTAA", + "dna_sequence_length": 690, + "functions": [ + "uracil-DNA-glycosylase" + ], + "id": "CDS_2564", + "location": [ + [ + "NC_000913", + 2716754, + "+", + 690 + ] + ], + "md5": "029c362fdd787d079a7ecd97e256a718", + "parent_gene": "", + "protein_md5": "c54e4c0a24c178ca13e44a4881f22111", + "protein_translation": "MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAESE", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008497" + ], + [ + "gene_synonym", + "ECK2579" + ], + [ + "gene_synonym", + "EcoGene:EG11786" + ], + [ + "gene_synonym", + "GI:16130506" + ], + [ + "gene_synonym", + "GeneID:947066" + ], + [ + "gene_synonym", + "JW2565" + ], + [ + "gene_synonym", + "NP_417076.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGJ5" + ], + [ + "gene_synonym", + "b2581" + ], + [ + "gene_synonym", + "yfiF" + ] + ], + "dna_sequence": "ATGAACGATGAAATGAAAGGTAAAAGCGGCAAGGTCAAAGTGATGTATGTCCGCAGTGATGATGATTCTGATAAACGTACCCACAACCCGCGTACCGGGAAAGGGGGCGGGCGTCCAGGAAAATCTCGTGCTGACGGTGGCCGTCGCCCCGCCCGCGATGACAAACAGAGTCAGCCCCGTGACCGCAAGTGGGAAGATTCGCCGTGGCGCACGGTTTCCCGCGCGCCGGGTGATGAGACGCCGGAAAAGGCCGATCACGGTGGCATCAGTGGTAAAAGTTTTATTGATCCGGAAGTGTTGCGTCGTCAGCGTGCGGAAGAAACCCGCGTCTACGGCGAAAATGCATGTCAGGCACTTTTCCAGAGCCGTCCGGAAGCGATTGTTCGCGCCTGGTTTATCCAGAGTGTAACGCCGCGTTTTAAAGAAGCTTTGCGCTGGATGGCAGCAAACCGCAAAGCGTACCATGTGGTGGATGAAGCGGAATTGACAAAAGCGTCAGGCACGGAACATCACGGCGGCGTTTGCTTCTTGATCAAAAAGCGTAACGGTACAACCGTGCAGCAGTGGGTAAGCCAGGCAGGCGCGCAGGATTGCGTTCTGGCACTGGAAAACGAATCTAACCCGCATAACCTGGGTGGCATGATGCGCAGCTGCGCGCACTTCGGCGTGAAAGGTGTCGTGGTGCAGGATGCGGCACTGCTGGAGTCGGGGGCGGCTATCCGTACCGCAGAAGGCGGCGCAGAGCACGTTCAGCCGATTACTGGCGACAACATTGTTAACGTGCTGGATGATTTCCGTCAGGCAGGTTACACCGTAGTGACCACTTCCAGCGAGCAGGGTAAACCGCTGTTCAAAACTAGTCTGCCAGCGAAAATGGTACTGGTGCTGGGTCAGGAATATGAAGGGTTACCGGATGCCGCACGCGATCCGAACGATCTGCGCGTGAAGATTGACGGTACGGGCAACGTTGCCGGGCTGAATATCTCTGTCGCAACCGGCGTTTTGCTTGGTGAATGGTGGCGTCAGAATAAAGCCTGA", + "dna_sequence_length": 1038, + "functions": [ + "putative methyltransferase" + ], + "id": "CDS_2565", + "location": [ + [ + "NC_000913", + 2718528, + "-", + 1038 + ] + ], + "md5": "cbf6e189f5cc012d12d291d3d2ded721", + "parent_gene": "", + "protein_md5": "0daba42f9cb1b20c55ca742c40e802af", + "protein_translation": "MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008501" + ], + [ + "gene_synonym", + "ECK2580" + ], + [ + "gene_synonym", + "EcoGene:EG11887" + ], + [ + "gene_synonym", + "GI:16130507" + ], + [ + "gene_synonym", + "GeneID:947062" + ], + [ + "gene_synonym", + "JW2566" + ], + [ + "gene_synonym", + "NP_417077.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGG4" + ], + [ + "gene_synonym", + "b2582" + ], + [ + "gene_synonym", + "trxC" + ], + [ + "gene_synonym", + "yfiG" + ] + ], + "dna_sequence": "ATGAATACCGTTTGTACCCATTGTCAGGCCATCAATCGCATTCCCGACGATCGGATCGAAGATGCGGCAAAATGCGGACGCTGCGGTCACGACTTGTTTGACGGAGAGGTGATTAATGCGACCGGTGAAACACTCGACAAATTGCTGAAGGATGATCTACCTGTGGTGATCGACTTCTGGGCACCGTGGTGCGGCCCCTGCCGTAATTTCGCACCAATTTTTGAAGATGTCGCGCAAGAGCGTAGCGGTAAAGTGCGCTTTGTGAAAGTGAATACCGAAGCTGAACGTGAATTGAGCAGTCGCTTTGGAATTCGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAA", + "dna_sequence_length": 420, + "functions": [ + "thioredoxin 2" + ], + "id": "CDS_2566", + "location": [ + [ + "NC_000913", + 2718735, + "+", + 420 + ] + ], + "md5": "25102d41f7d9a0410db6769a0c962586", + "parent_gene": "", + "protein_md5": "e9d50cfbfaea17e8ebb59f9add77f07a", + "protein_translation": "MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008503" + ], + [ + "gene_synonym", + "ECK2581" + ], + [ + "gene_synonym", + "EcoGene:EG14223" + ], + [ + "gene_synonym", + "GI:90111463" + ], + [ + "gene_synonym", + "GeneID:947057" + ], + [ + "gene_synonym", + "JW5409" + ], + [ + "gene_synonym", + "NP_417078.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47319" + ], + [ + "gene_synonym", + "b2583" + ], + [ + "gene_synonym", + "yfiP" + ] + ], + "dna_sequence": "ATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGCCAACGCTGTCTTTTGCCAGAGAAATTATGTCTCTGTTCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGTACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGCTGTTTATCATGCTCGATGGTACCTGGCCGGAAGCTCGCAAGATGTTTCGTAAAAGTCCGTATCTGGATAATCTTCCCGTCATTTCCGTCGATCTTTCCCGGCTTTCTGCCTATCGCCTGCGTGAAGCCCAGGCTGAAGGCCAATATTGTACTGCCGAGGTAGCCATCGCACTGTTAGATATGGCCGGCGATACCGGGGCGGCGGCAGGGTTAGGCGAGCATTTTACCCGCTTTAAAACACGCTATCTGGCAGGAAAAACGCAACATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAA", + "dna_sequence_length": 699, + "functions": [ + "DTW domain protein" + ], + "id": "CDS_2567", + "location": [ + [ + "NC_000913", + 2719223, + "+", + 699 + ] + ], + "md5": "c249d6753f5d80aa44fa5d888d91abdf", + "parent_gene": "", + "protein_md5": "0cc48a60b246695cb57422c52f7e5c5c", + "protein_translation": "MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008506" + ], + [ + "gene_synonym", + "ECK2582" + ], + [ + "gene_synonym", + "EcoGene:EG14224" + ], + [ + "gene_synonym", + "GI:16130509" + ], + [ + "gene_synonym", + "GeneID:947056" + ], + [ + "gene_synonym", + "JW2568" + ], + [ + "gene_synonym", + "NP_417079.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76594" + ], + [ + "gene_synonym", + "b2584" + ], + [ + "gene_synonym", + "pat" + ], + [ + "gene_synonym", + "patZ" + ], + [ + "gene_synonym", + "pka" + ], + [ + "gene_synonym", + "yfiQ" + ] + ], + "dna_sequence": "ATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGTCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCTTGCCCTTTACACCCGACCTTGCGGTTTTATGTACCAATGCCAGCCGTAATCTTGCTCTTCTGGAAGAGCTCGGCGAGAAAGGCTGTAAAACCTGCATTATTCTTTCCGCCCCGGCATCGCAACACGAAGATCTCCGCGCCTGCGCCCTGCGCCATAACATGCGCCTGCTTGGACCAAACAGTCTGGGTTTACTGGCTCCCTGGCAAGGTCTGAATGCCAGCTTTTCGCCTGTGCCGATTAAACGCGGCAAGCTGGCGTTTATTTCGCAATCGGCTGCCGTCTCCAACACCATCCTCGACTGGGCGCAACAGCGTAAGATGGGCTTTTCCTACTTTATTGCGCTCGGCGACAGCCTGGATATCGACGTTGATGAATTGCTTGACTATCTGGCACGCGACAGTAAAACCAGCGCCATCCTGCTCTATCTCGAACAGTTAAGCGACGCGCGACGCTTTGTTTCGGCGGCCCGTAGTGCCTCGCGTAATAAACCGATTCTGGTGATTAAAAGCGGACGTAGCCCGGCGGCACAGCGACTGCTCAACACGACGGCAGGAATGGACCCGGCATGGGATGCGGCTATTCAGCGTGCCGGTTTGTTGCGGGTACAGGACACCCACGAGCTGTTTTCGGCGGTGGAAACCCTTAGCCATATGCGCCCGCTACGTGGCGACCGGCTGATGATTATCAGCAACGGTGCTGCGCCTGCCGCGCTGGCGCTGGATGCCTTATGGTCACGCAATGGCAAGCTGGCAACGCTAAGCGAAGAAACCTGCCAGAAACTGCGCGATGCACTGCCAGAACATGTGGCAATATCTAACCCGCTCGATCTACGCGATGACGCCAGCAGTGAGCACTATATTAAAACGCTGGATATTCTGCTCCACAGCCAGGATTTTGACGCGCTGATGGTTATTCATTCGCCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGTCGCTCGATACCCATGAAGTTCAGCCCATCCTGCAAGCGTATGGCATGAACACGCTCCCTACCTGGATTGCCAGCGATAGCACCGAAGCGGTGCATATTGCCGAACAGATTGGTTATCCGGTGGCGCTGAAATTGCGTTCGCCGGATATTCCACATAAATCGGAAGTTCAGGGCGTCATGCTTTACCTGCGTACAGCCAATGAAGTCCAGCAAGCGGCGAACGCTATTTTCGATCGCGTAAAAATGGCCTGGCCACAGGCGCGGGTCCACGGCCTGTTGGTGCAAAGTATGGCTAACCGTGCTGGCGCTCAGGAGTTGCGGGTTGTGGTTGAGCACGATCCGGTTTTCGGGCCGTTGATCATGCTGGGTGAAGGCGGTGTGGAGTGGCGTCCTGAAGATCAAGCCGTCGTCGCACTGCCGCCGCTGAACATGAACCTGGCCCGCTATCTGGTTATTCAGGGGATCAAAAGTAAAAAGATTCGTGCGCGCAGTGCGCTACGCCCATTGGATGTTGCAGGCTTGAGCCAGCTTCTGGTGCAGGTTTCCAACTTGATTGTCGATTGCCCGGAAATTCAGCGTCTGGATATTCATCCTTTGCTGGCTTCTGGCAGTGAATTTACCGCGCTGGATGTCACGCTGGATATCTCGCCGTTTGAAGGCGATAACGAGAGTCGGCTGGCAGTGCGCCCTTATCCGCATCAGCTGGAAGAATGGGTAGAATTGAAAAACGGTGAACGCTGCTTGTTCCGCCCGATTTTGCCAGAAGATGAGCCACAACTTCAGCAATTCATTTCGCGAGTCACCAAAGAAGATCTTTATTACCGCTACTTTAGCGAGATCAACGAATTTACCCATGAAGATTTAGCCAACATGACACAGATCGACTACGATCGGGAAATGGCGTTTGTAGCGGTACGACGTATTGATCAAACGGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGTGGCATGGTGGCGCTAGCCCGCAAGCTCGGGTTTAACGTTGATATCCAGCTCGAAGAGGGGATCGTTGGGCTTACGCTAAATCTTGCCCAGCGCGAGGAATCATGA", + "dna_sequence_length": 2661, + "functions": [ + "protein lysine acetyltransferase" + ], + "id": "CDS_2568", + "location": [ + [ + "NC_000913", + 2719953, + "+", + 2661 + ] + ], + "md5": "216a0fe5b13a68ee215873e7c4cef4cf", + "parent_gene": "", + "protein_md5": "db3e7c99a4483274f13e77a0ccdcc479", + "protein_translation": "MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES", + "protein_translation_length": 886, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008510" + ], + [ + "gene_synonym", + "ECK2583" + ], + [ + "gene_synonym", + "EcoGene:EG10781" + ], + [ + "gene_synonym", + "GI:90111464" + ], + [ + "gene_synonym", + "GeneID:947059" + ], + [ + "gene_synonym", + "JW2569" + ], + [ + "gene_synonym", + "NP_417080.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23830" + ], + [ + "gene_synonym", + "b2585" + ], + [ + "gene_synonym", + "pss" + ], + [ + "gene_synonym", + "pssA" + ] + ], + "dna_sequence": "ATGTTGTCAAAATTTAAGCGTAATAAACATCAACAACACCTTGCCCAACTACCCAAGATTTCTCAATCAGTTGATGATGTCGATTTCTTTTACGCTCCCGCCGACTTCCGGGAGACGCTGCTGGAAAAAATAGCCAGCGCGAAGCAGCGCATTTGCATTGTCGCCCTGTATCTCGAACAGGATGACGGTGGCAAAGGCATTCTGAACGCGTTGTATGAGGCTAAAAGGCAGCGTCCGGAACTGGATGTGCGGGTGCTGGTCGACTGGCATCGTGCACAACGTGGACGCATTGGCGCTGCGGCATCTAACACTAACGCTGACTGGTACTGCCGCATGGCGCAGGAAAATCCGGGCGTAGATGTTCCGGTTTATGGCGTTCCAATCAATACTCGTGAAGCCCTTGGTGTTCTGCACTTTAAAGGCTTTATCATCGACGATAGCGTACTTTATAGCGGTGCCAGCCTGAACGATGTTTACCTGCATCAGCACGATAAATATCGCTACGACCGTTATCATCTGATCCGTAACCGTAAGATGTCAGACATTATGTTTGAATGGGTTACACAGAATATTATGAATGGCCGCGGCGTTAATCGTCTGGATGATGTTAATCGGCCAAAAAGCCCGGAAATCAAGAACGATATTCGTCTGTTCCGCCAGGAGCTGCGTGATGCCGCTTATCATTTCCAGGGCGATGCCGACAACGATCAGCTTTCTGTAACGCCGCTAGTGGGGCTGGGGAAATCGAGTCTGTTGAACAAGACCATTTTCCATCTTATGCCTTGTGCCGAGCAGAAACTAACCATCTGTACGCCATACTTCAACCTGCCAGCAATCCTTGTGCGCAATATTATCCAGTTGCTGCGCGAAGGGAAAAAGGTCGAAATTATTGTTGGTGATAAAACCGCGAATGACTTCTACATTCCGGAAGATGAACCTTTCAAGATAATTGGCGCATTGCCTTATCTCTATGAGATCAATCTGCGTCGTTTCCTGAGCCGTTTGCAGTATTACGTCAATACTGACCAGCTAGTGGTTCGGTTATGGAAAGATGACGACAACACCTATCACCTGAAAGGGATGTGGGTTGATGATAAGTGGATGTTGATCACCGGTAATAACCTGAACCCGCGCGCCTGGCGTCTGGATCTGGAAAACGCCATTTTGATCCACGATCCGCAACTTGAGCTGGCGCCACAGCGAGAGAAAGAACTGGAGCTGATCCGCGAGCATACCACCATCGTTAAGCACTATCGCGATCTGCAAAGTATTGCCGATTATCCGGTGAAGGTTCGTAAACTCATCCGCCGTTTGCGCCGTATCCGCATCGACCGATTAATTAGCCGCATCCTGTAA", + "dna_sequence_length": 1356, + "functions": [ + "phosphatidylserine synthase", + "CDP-diacylglycerol-serine O-phosphatidyltransferase" + ], + "id": "CDS_2569", + "location": [ + [ + "NC_000913", + 2722727, + "+", + 1356 + ] + ], + "md5": "7271290e4dfaaac7cdf71bdbec35f153", + "parent_gene": "", + "protein_md5": "733b113d00017964d4c90f6e6325c31c", + "protein_translation": "MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLFRQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRIL", + "protein_translation_length": 451, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008513" + ], + [ + "gene_synonym", + "ECK2584" + ], + [ + "gene_synonym", + "EcoGene:EG12857" + ], + [ + "gene_synonym", + "GI:145698302" + ], + [ + "gene_synonym", + "GeneID:947060" + ], + [ + "gene_synonym", + "JW2570" + ], + [ + "gene_synonym", + "NP_417081.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46126" + ], + [ + "gene_synonym", + "b2586" + ], + [ + "gene_synonym", + "yfiM" + ] + ], + "dna_sequence": "TTGCGTATTCTTTTTGTCTGTTCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGCCGGGATCGCAGTGCCATGTTTGGATTGATGTTCTCTGTCAGTTTGGGGGCGTCAAAAGAGCTTTGGGATAGCCGCCCCGAAGGGAGCGGCTGGAGCTGGAAGGATTTGGCCTGGGATGTCGCCGGTGCAAGCACCGGCTATACCGTCTGGCAACTGACCCGTCACTAA", + "dna_sequence_length": 324, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_2570", + "location": [ + [ + "NC_000913", + 2724128, + "+", + 324 + ] + ], + "md5": "46b38815eec7773165bf59bd248ec143", + "parent_gene": "", + "protein_md5": "85109cb0c760d3577850bc479c1bc0f1", + "protein_translation": "MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008515" + ], + [ + "gene_synonym", + "ECK2585" + ], + [ + "gene_synonym", + "EcoGene:EG10522" + ], + [ + "gene_synonym", + "GI:16130512" + ], + [ + "gene_synonym", + "GeneID:947069" + ], + [ + "gene_synonym", + "JW2571" + ], + [ + "gene_synonym", + "NP_417082.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX3" + ], + [ + "gene_synonym", + "b2587" + ], + [ + "gene_synonym", + "kgtP" + ], + [ + "gene_synonym", + "witA" + ] + ], + "dna_sequence": "ATGGCTGAAAGTACTGTAACGGCAGACAGCAAACTGACAAGTAGTGATACTCGTCGCCGCATTTGGGCGATTGTGGGGGCCTCTTCAGGTAATCTGGTCGAGTGGTTCGATTTCTATGTCTACTCGTTCTGTTCACTCTACTTTGCCCACATCTTCTTCCCTTCCGGGAACACGACGACTCAACTACTACAAACAGCAGGTGTTTTTGCTGCGGGATTCCTGATGCGCCCAATAGGCGGTTGGCTATTTGGCCGCATAGCCGATAAACATGGTCGCAAAAAATCGATGCTGTTATCGGTGTGTATGATGTGTTTCGGATCGCTGGTTATCGCCTGCCTCCCAGGTTATGAAACTATAGGTACGTGGGCTCCGGCATTATTGCTTCTCGCTCGTTTATTTCAGGGATTATCTGTTGGCGGAGAATATGGCACCAGCGCCACCTATATGAGTGAAGTTGCCGTTGAAGGGCGCAAAGGTTTTTACGCATCATTTCAGTATGTGACGTTGATCGGCGGACAACTGCTAGCCCTACTGGTTGTCGTGGTTTTACAACACACCATGGAAGACGCTGCACTCAGAGAGTGGGGATGGCGTATTCCTTTCGCGTTAGGAGCTGTGTTAGCTGTTGTGGCGTTGTGGTTACGTCGTCAGTTAGATGAAACTTCGCAACAAGAAACGCGCGCTTTAAAAGAAGCTGGATCTCTGAAAGGATTATGGCGCAATCGCCGTGCATTCATCATGGTTCTCGGTTTTACCGCTGCGGGCTCCCTTTGTTTCTATACCTTCACTACTTATATGCAGAAGTATCTGGTAAATACTGCGGGAATGCATGCCAACGTGGCGAGTGGCATTATGACTGCCGCATTGTTTGTATTCATGCTTATTCAACCACTCATTGGCGCGCTGTCGGATAAGATTGGTCGCCGTACCTCAATGTTATGTTTCGGTTCGCTGGCAGCCATTTTTACCGTTCCTATTCTCTCAGCATTGCAAAACGTTTCCTCGCCTTATGCCGCTTTTGGTCTGGTGATGTGTGCCCTGCTGATAGTGAGTTTTTATACATCAATCAGTGGAATACTGAAGGCTGAGATGTTCCCGGCACAGGTTCGCGCATTAGGCGTTGGTCTGTCATATGCGGTCGCTAATGCTATATTTGGTGGTTCGGCGGAGTACGTAGCGTTGTCGCTGAAATCAATAGGAATGGAAACAGCCTTCTTCTGGTATGTGACCTTGATGGCCGTGGTGGCGTTTCTGGTTTCTTTGATGCTACATCGCAAAGGGAAGGGGATGCGTCTTTAG", + "dna_sequence_length": 1299, + "functions": [ + "alpha-ketoglutarate transporter" + ], + "id": "CDS_2571", + "location": [ + [ + "NC_000913", + 2725746, + "-", + 1299 + ] + ], + "md5": "e245c5eed26aee73b9ed54fdcc2e3fcf", + "parent_gene": "", + "protein_md5": "79418c8d83875c099c912df867d9aa6e", + "protein_translation": "MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008527" + ], + [ + "gene_synonym", + "ECK2590" + ], + [ + "gene_synonym", + "EcoGene:EG10157" + ], + [ + "gene_synonym", + "GI:16130513" + ], + [ + "gene_synonym", + "GeneID:947077" + ], + [ + "gene_synonym", + "JW2573" + ], + [ + "gene_synonym", + "NP_417083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63284" + ], + [ + "gene_synonym", + "b2592" + ], + [ + "gene_synonym", + "clpB" + ], + [ + "gene_synonym", + "htpM" + ] + ], + "dna_sequence": "ATGCGTCTGGATCGTCTTACTAATAAATTCCAGCTTGCTCTTGCCGATGCCCAATCACTTGCACTCGGGCACGACAACCAATTTATCGAACCACTTCATTTAATGAGCGCCCTGCTGAATCAGGAAGGGGGTTCGGTTAGTCCTTTATTAACATCCGCTGGCATAAATGCTGGCCAGTTGCGCACAGATATCAATCAGGCATTAAATCGTTTACCGCAGGTTGAAGGTACTGGTGGTGATGTCCAGCCATCACAGGATCTGGTGCGCGTTCTTAATCTTTGCGACAAGCTGGCGCAAAAACGTGGTGATAACTTTATCTCGTCAGAACTGTTCGTTCTGGCGGCACTTGAGTCTCGCGGCACGCTGGCCGACATCCTGAAAGCAGCAGGGGCGACCACCGCCAACATTACTCAAGCGATTGAACAAATGCGTGGAGGTGAAAGCGTGAACGATCAAGGTGCTGAAGACCAACGTCAGGCTTTGAAAAAATATACCATCGACCTTACCGAACGAGCCGAACAGGGCAAACTCGATCCGGTGATTGGTCGTGATGAAGAAATTCGCCGTACCATTCAGGTGCTGCAACGTCGTACTAAAAATAACCCGGTACTGATTGGTGAACCCGGCGTCGGTAAAACTGCCATCGTTGAAGGTCTGGCGCAGCGTATTATCAACGGCGAAGTGCCGGAAGGGTTGAAAGGCCGCCGGGTACTGGCGCTGGATATGGGCGCGCTGGTGGCTGGGGCGAAATATCGCGGTGAGTTTGAAGAACGTTTAAAAGGCGTGCTTAACGATCTTGCCAAACAGGAAGGCAACGTCATCCTATTTATCGACGAATTACATACCATGGTCGGCGCGGGTAAAGCCGATGGCGCAATGGACGCCGGAAACATGCTGAAACCGGCGCTGGCGCGTGGTGAATTGCACTGCGTAGGTGCCACGACGCTTGACGAATATCGCCAGTACATTGAAAAAGATGCTGCGCTGGAACGTCGTTTCCAGAAAGTGTTTGTTGCCGAGCCTTCTGTTGAAGATACCATTGCGATTCTGCGTGGCCTGAAAGAACGTTACGAATTGCACCACCATGTGCAAATTACTGACCCGGCAATTGTTGCAGCGGCGACGTTGTCTCATCGCTACATTGCTGACCGTCAGCTGCCGGATAAAGCCATCGACCTGATCGATGAAGCAGCATCCAGCATTCGTATGCAGATTGACTCAAAACCAGAAGAACTCGACCGACTCGATCGTCGTATCATCCAGCTCAAACTGGAACAACAGGCGTTAATGAAAGAGTCTGATGAAGCCAGTAAAAAACGTCTGGATATGCTCAACGAAGAACTGAGCGACAAAGAACGTCAGTACTCCGAGTTAGAAGAAGAGTGGAAAGCAGAGAAGGCATCGCTTTCTGGTACGCAGACCATTAAAGCGGAACTGGAACAGGCGAAAATCGCTATTGAACAGGCTCGCCGTGTGGGGGACCTGGCGCGGATGTCTGAACTGCAATACGGCAAAATCCCGGAACTGGAAAAGCAACTGGAAGCCGCAACGCAGCTCGAAGGCAAAACTATGCGTCTGTTGCGTAATAAAGTGACCGACGCCGAAATTGCTGAAGTGCTGGCGCGTTGGACGGGGATTCCGGTTTCTCGCATGATGGAAAGCGAGCGCGAAAAACTGCTGCGTATGGAGCAAGAACTGCACCATCGCGTAATTGGTCAGAACGAAGCGGTTGATGCGGTATCTAACGCTATTCGTCGTAGCCGTGCGGGGCTGGCGGATCCAAATCGCCCGATTGGTTCATTCCTGTTCCTCGGCCCAACTGGTGTGGGGAAAACAGAGCTTTGTAAGGCGCTGGCGAACTTTATGTTTGATAGCGACGAGGCGATGGTCCGTATCGATATGTCCGAGTTTATGGAGAAACACTCGGTGTCTCGTTTGGTTGGTGCGCCTCCGGGATATGTCGGTTATGAAGAAGGTGGCTACCTGACCGAAGCGGTGCGTCGTCGTCCGTATTCCGTCATCCTGCTGGATGAAGTGGAAAAAGCGCATCCGGATGTCTTCAACATTCTGTTGCAGGTACTGGATGATGGGCGTCTGACTGACGGGCAAGGGAGAACGGTCGACTTCCGTAATACGGTCGTCATTATGACCTCTAACCTCGGTTCCGATCTGATTCAGGAACGCTTCGGTGAACTGGATTATGCGCACATGAAAGAGCTGGTGCTCGGTGTGGTAAGCCATAACTTCCGTCCGGAATTCATTAACCGTATCGATGAAGTGGTGGTCTTCCATCCGCTGGGTGAACAGCACATTGCCTCGATTGCGCAGATTCAGTTGAAACGTCTGTACAAACGTCTGGAAGAACGTGGTTATGAAATCCACATTTCTGACGAGGCGCTGAAACTGCTGAGCGAGAACGGTTACGATCCGGTCTATGGTGCACGTCCTCTGAAACGTGCAATTCAGCAGCAGATCGAAAACCCGCTGGCACAGCAAATACTGTCTGGTGAATTGGTTCCGGGTAAAGTGATTCGCCTGGAAGTTAATGAAGACCGGATTGTCGCCGTCCAGTAA", + "dna_sequence_length": 2574, + "functions": [ + "protein disaggregation chaperone" + ], + "id": "CDS_2572", + "location": [ + [ + "NC_000913", + 2734173, + "-", + 2574 + ] + ], + "md5": "29aec1e81264654487b3c87f05f8d6f6", + "parent_gene": "", + "protein_md5": "d6ef643f0804ab84ab4a77a7091bab22", + "protein_translation": "MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ", + "protein_translation_length": 857, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008530" + ], + [ + "gene_synonym", + "ECK2591" + ], + [ + "gene_synonym", + "EcoGene:EG12097" + ], + [ + "gene_synonym", + "GI:16130514" + ], + [ + "gene_synonym", + "GeneID:947089" + ], + [ + "gene_synonym", + "JW2575" + ], + [ + "gene_synonym", + "NP_417084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33644" + ], + [ + "gene_synonym", + "b2593" + ], + [ + "gene_synonym", + "yfiH" + ] + ], + "dna_sequence": "ATGAGTAAGCTGATTGTCCCGCAGTGGCCGCAGCCAAAAGGTGTTGCGGCCTGTAGCTCCACTCGTATCGGCGGCGTGAGCTTGCCCCCGTATGACTCACTCAACCTCGGTGCCCATTGTGGCGATAACCCGGATCACGTTGAGGAGAATCGCAAGCGACTTTTTGCTGCGGGCAATTTGCCTTCTAAACCGGTCTGGCTTGAGCAGGTACACGGCAAAGATGTGCTTAAGCTCACTGGCGAACCTTATGCCTCAAAACGGGCGGATGCCTCTTATAGCAATACGCCCGGCACGGTTTGCGCAGTGATGACTGCCGACTGCCTCCCTGTGCTGTTTTGCAATCGAGCGGGAACGGAAGTCGCCGCCGCTCATGCTGGCTGGCGTGGACTGTGCGCAGGCGTGCTGGAAGAGACGGTTTCCTGTTTTGCTGATAATCCGGAAAATATTCTCGCCTGGTTAGGGCCGGCAATTGGTCCACGCGCGTTCGAAGTGGGGGGGGAGGTTCGCGAGGCGTTTATGGCAGTAGACGCTAAAGCAAGTGCAGCTTTCATTCAGCATGGTGATAAGTATCTGGCGGATATTTATCAGCTTGCCCGGCAGCGTCTGGCGAACGTGGGTGTTGAGCAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGAGACTTTCTTCTCTTATCGTCGCGACAAGACCACCGGTCGTATGGCAAGTTTCATTTGGCTGATATAA", + "dna_sequence_length": 732, + "functions": [ + "UPF0124 family protein" + ], + "id": "CDS_2573", + "location": [ + [ + "NC_000913", + 2735034, + "-", + 732 + ] + ], + "md5": "0723c4995db094ab024fd7c1610b5a07", + "parent_gene": "", + "protein_md5": "0964b88bae051b5140427145ee7ba2a6", + "protein_translation": "MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008532" + ], + [ + "gene_synonym", + "ECK2592" + ], + [ + "gene_synonym", + "EcoGene:EG12098" + ], + [ + "gene_synonym", + "GI:16130515" + ], + [ + "gene_synonym", + "GeneID:947087" + ], + [ + "gene_synonym", + "JW2576" + ], + [ + "gene_synonym", + "NP_417085.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33643" + ], + [ + "gene_synonym", + "b2594" + ], + [ + "gene_synonym", + "rluD" + ], + [ + "gene_synonym", + "sfhB" + ], + [ + "gene_synonym", + "yfiI" + ] + ], + "dna_sequence": "ATGGCACAACGAGTACAGCTCACTGCAACGGTGTCCGAAAACCAACTCGGTCAACGCTTAGATCAGGCTTTGGCCGAAATGTTCCCGGATTATTCACGTTCGCGAATAAAAGAATGGATCCTCGACCAGCGAGTGCTGGTTAACGGCAAAGTTTGTGATAAGCCGAAAGAAAAAGTATTGGGTGGCGAGCAGGTTGCCATCAACGCTGAGATTGAAGAAGAAGCGCGTTTTGAACCGCAGGATATCCCGCTGGATATCGTCTATGAAGATGAAGACATTATTATCATTAATAAACCGCGCGACCTGGTGGTACATCCTGGCGCGGGTAACCCGGATGGCACGGTACTGAATGCGTTGCTTCATTACTATCCACCCATTGCCGATGTACCGCGTGCGGGCATCGTCCATCGTCTGGATAAAGACACCACTGGCCTGATGGTTGTGGCAAAAACCGTTCCGGCTCAGACGCGTTTAGTCGAATCTTTGCAACGGCGTGAAATTACTCGTGAGTATGAAGCGGTGGCGATTGGTCATATGACCGCAGGTGGCACGGTGGACGAGCCAATCAGTCGCCACCCGACCAAACGTACCCATATGGCGGTGCATCCGATGGGCAAACCAGCGGTGACTCACTATCGCATCATGGAACACTTCCGTGTGCACACGCGTCTGCGGTTGCGTCTGGAAACTGGACGTACGCACCAGATCCGCGTGCATATGGCCCATATCACTCATCCGCTGGTGGGCGATCCGGTTTATGGTGGCCGTCCGCGTCCGCCAAAAGGTGCTTCGGAAGCATTTATCTCCACGCTGCGTAAGTTTGACCGCCAGGCGCTACATGCAACCATGCTGCGTCTTTATCACCCGATCTCCGGCATCGAAATGGAATGGCATGCGCCTATTCCACAAGATATGGTGGAGCTGATTGAGGTGATGCGCGCCGATTTCGAAGAACATAAGGATGAAGTGGACTGGTTATGA", + "dna_sequence_length": 981, + "functions": [ + "23S rRNA pseudouridine(1911,1915,1917) synthase" + ], + "id": "CDS_2574", + "location": [ + [ + "NC_000913", + 2736011, + "-", + 981 + ] + ], + "md5": "b6ce6e39644f27e8ee05f96358682c95", + "parent_gene": "", + "protein_md5": "007e91ed8c72886d7f9fd02da8969de7", + "protein_translation": "MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008536" + ], + [ + "gene_synonym", + "ECK2593" + ], + [ + "gene_synonym", + "EcoGene:EG14222" + ], + [ + "gene_synonym", + "GI:16130516" + ], + [ + "gene_synonym", + "GeneID:947086" + ], + [ + "gene_synonym", + "JW2577" + ], + [ + "gene_synonym", + "NP_417086.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC02" + ], + [ + "gene_synonym", + "b2595" + ], + [ + "gene_synonym", + "bamD" + ], + [ + "gene_synonym", + "ecfD" + ], + [ + "gene_synonym", + "yfiO" + ] + ], + "dna_sequence": "ATGACGCGCATGAAATATCTGGTGGCAGCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACCACCGATGCCACCAAACGTCTGGTATTCCTGAAAGATCGTCTGGCGAAATATGAATACTCCGTGGCCGAGTACTATACAGAACGTGGCGCATGGGTTGCCGTCGTTAACCGCGTAGAAGGCATGTTGCGCGACTACCCGGATACCCAGGCTACGCGTGATGCGCTGCCGCTGATGGAAAATGCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAA", + "dna_sequence_length": 738, + "functions": [ + "BamABCDE complex OM biogenesis lipoprotein" + ], + "id": "CDS_2575", + "location": [ + [ + "NC_000913", + 2736146, + "+", + 738 + ] + ], + "md5": "70db8a3e09791552576ff328ece358d3", + "parent_gene": "", + "protein_md5": "471cb7c8f5b737badaa0c459d8e92d62", + "protein_translation": "MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008540" + ], + [ + "gene_synonym", + "ECK2594" + ], + [ + "gene_synonym", + "EcoGene:EG11151" + ], + [ + "gene_synonym", + "GI:16130518" + ], + [ + "gene_synonym", + "GeneID:947129" + ], + [ + "gene_synonym", + "JW2578" + ], + [ + "gene_synonym", + "NP_417088.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD49" + ], + [ + "gene_synonym", + "b2597" + ], + [ + "gene_synonym", + "raiA" + ], + [ + "gene_synonym", + "yfiA" + ] + ], + "dna_sequence": "ATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCCGGCCATCCGCCAACATGTCGCAGACCGTCTCGCCAAACTGGAAAAATGGCAAACACATCTGATTAATCCACATATCATTCTGTCCAAAGAGCCACAAGGGTTTGTTGCTGACGCCACAATCAATACACCTAACGGCGTTCTGGTTGCCAGTGGTAAACATGAAGATATGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAG", + "dna_sequence_length": 342, + "functions": [ + "cold shock protein associated with 30S ribosomal subunit" + ], + "id": "CDS_2576", + "location": [ + [ + "NC_000913", + 2737154, + "+", + 342 + ] + ], + "md5": "d173bbfe31d8f85887b701d44a6438a6", + "parent_gene": "", + "protein_md5": "56a38ea72f0be578bfef7f17b93bd275", + "protein_translation": "MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008543" + ], + [ + "gene_synonym", + "ECK2595" + ], + [ + "gene_synonym", + "EcoGene:EG11271" + ], + [ + "gene_synonym", + "GI:16130519" + ], + [ + "gene_synonym", + "GeneID:947080" + ], + [ + "gene_synonym", + "JW2579" + ], + [ + "gene_synonym", + "NP_417089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD72" + ], + [ + "gene_synonym", + "b2598" + ], + [ + "gene_synonym", + "pheAE" + ], + [ + "gene_synonym", + "pheL" + ] + ], + "dna_sequence": "ATGAAACACATACCGTTTTTCTTCGCATTCTTTTTTACCTTCCCCTGA", + "dna_sequence_length": 48, + "functions": [ + "pheA gene leader peptide" + ], + "id": "CDS_2577", + "location": [ + [ + "NC_000913", + 2737599, + "+", + 48 + ] + ], + "md5": "4cf0bd38b07546735b0b800bc615335c", + "parent_gene": "", + "protein_md5": "2efe0b4ae72e2aff55aa6f5f81f4505d", + "protein_translation": "MKHIPFFFAFFFTFP", + "protein_translation_length": 15, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008545" + ], + [ + "gene_synonym", + "ECK2596" + ], + [ + "gene_synonym", + "EcoGene:EG10707" + ], + [ + "gene_synonym", + "GI:16130520" + ], + [ + "gene_synonym", + "GeneID:947081" + ], + [ + "gene_synonym", + "JW2580" + ], + [ + "gene_synonym", + "NP_417090.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J8" + ], + [ + "gene_synonym", + "b2599" + ], + [ + "gene_synonym", + "pheA" + ] + ], + "dna_sequence": "ATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAATTATTAGCGTTACTGGCAGAACGGCGCGAACTGGCCGTCGAGGTGGGAAAAGCCAAACTGCTCTCGCATCGCCCGGTACGTGATATTGATCGTGAACGCGATTTGCTGGAAAGATTAATTACGCTCGGTAAAGCGCACCATCTGGACGCCCATTACATTACTCGCCTGTTCCAGCTCATCATTGAAGATTCCGTATTAACTCAGCAGGCTTTGCTCCAACAACATCTCAATAAAATTAATCCGCACTCAGCACGCATCGCTTTTCTCGGCCCCAAAGGTTCTTATTCCCATCTTGCGGCGCGCCAGTATGCTGCCCGTCACTTTGAGCAATTCATTGAAAGTGGCTGCGCCAAATTTGCCGATATTTTTAATCAGGTGGAAACCGGCCAGGCCGACTATGCCGTCGTACCGATTGAAAATACCAGCTCCGGTGCCATAAACGACGTTTACGATCTGCTGCAACATACCAGCTTGTCGATTGTTGGCGAGATGACGTTAACTATCGACCATTGTTTGTTGGTCTCCGGCACTACTGATTTATCCACCATCAATACGGTCTACAGCCATCCGCAGCCATTCCAGCAATGCAGCAAATTCCTTAATCGTTATCCGCACTGGAAGATTGAATATACCGAAAGTACGTCTGCGGCAATGGAAAAGGTTGCACAGGCAAAATCACCGCATGTTGCTGCGTTGGGAAGCGAAGCTGGCGGCACTTTGTACGGTTTGCAGGTACTGGAGCGTATTGAAGCAAATCAGCGACAAAACTTCACCCGATTTGTGGTGTTGGCGCGTAAAGCCATTAACGTGTCTGATCAGGTTCCGGCGAAAACCACGTTGTTAATGGCGACCGGGCAACAAGCCGGTGCGCTGGTTGAAGCGTTGCTGGTACTGCGCAACCACAATCTGATTATGACCCGTCTGGAATCACGCCCGATTCACGGTAATCCATGGGAAGAGATGTTCTATCTGGATATTCAGGCCAATCTTGAATCAGCGGAAATGCAAAAAGCATTGAAAGAGTTAGGGGAAATCACCCGTTCAATGAAGGTATTGGGCTGTTACCCAAGTGAGAACGTAGTGCCTGTTGATCCAACCTGA", + "dna_sequence_length": 1161, + "functions": [ + "chorismate mutase and prephenate dehydratase, P-protein" + ], + "id": "CDS_2578", + "location": [ + [ + "NC_000913", + 2737745, + "+", + 1161 + ] + ], + "md5": "4dbce2774896eb16a5919af7cee5dbbf", + "parent_gene": "", + "protein_md5": "d3e39be20748e172df99818375e5108c", + "protein_translation": "MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPHSARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT", + "protein_translation_length": 386, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008547" + ], + [ + "gene_synonym", + "ECK2597" + ], + [ + "gene_synonym", + "EcoGene:EG11039" + ], + [ + "gene_synonym", + "GI:16130521" + ], + [ + "gene_synonym", + "GeneID:947115" + ], + [ + "gene_synonym", + "JW2581" + ], + [ + "gene_synonym", + "NP_417091.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07023" + ], + [ + "gene_synonym", + "b2600" + ], + [ + "gene_synonym", + "tyrA" + ] + ], + "dna_sequence": "ATGGTTGCTGAATTGACCGCATTACGCGATCAAATTGATGAAGTCGATAAAGCGCTGCTGAATTTATTAGCGAAGCGTCTGGAACTGGTTGCTGAAGTGGGCGAGGTGAAAAGCCGCTTTGGACTGCCTATTTATGTTCCGGAGCGCGAGGCATCTATGTTGGCCTCGCGTCGTGCAGAGGCGGAAGCTCTGGGTGTACCGCCAGATCTGATTGAGGATGTTTTGCGTCGGGTGATGCGTGAATCTTACTCCAGTGAAAACGACAAAGGATTTAAAACACTTTGTCCGTCACTGCGTCCGGTGGTTATCGTCGGCGGTGGCGGTCAGATGGGACGCCTGTTCGAGAAGATGCTGACCCTCTCGGGTTATCAGGTGCGGATTCTGGAGCAACATGACTGGGATCGAGCGGCTGATATTGTTGCCGATGCCGGAATGGTGATTGTTAGTGTGCCAATCCACGTTACTGAGCAAGTTATTGGCAAATTACCGCCTTTACCGAAAGATTGTATTCTGGTCGATCTGGCATCAGTGAAAAATGGGCCATTACAGGCCATGCTGGTGGCGCATGATGGTCCGGTGCTGGGGCTACACCCGATGTTCGGTCCGGACAGCGGTAGCCTGGCAAAGCAAGTTGTGGTCTGGTGTGATGGACGTAAACCGGAAGCATACCAATGGTTTCTGGAGCAAATTCAGGTCTGGGGCGCTCGGCTGCATCGTATTAGCGCCGTCGAGCACGATCAGAATATGGCGTTTATTCAGGCACTGCGCCACTTTGCTACTTTTGCTTACGGGCTGCACCTGGCAGAAGAAAATGTTCAGCTTGAGCAACTTCTGGCGCTCTCTTCGCCGATTTACCGCCTTGAGCTGGCGATGGTCGGGCGACTGTTTGCTCAGGATCCGCAGCTTTATGCCGACATCATTATGTCGTCAGAGCGTAATCTGGCGTTAATCAAACGTTACTATAAGCGTTTCGGCGAGGCGATTGAGTTGCTGGAGCAGGGCGATAAGCAGGCGTTTATTGACAGTTTCCGCAAGGTGGAGCACTGGTTCGGCGATTACGCACAGCGTTTTCAGAGTGAAAGCCGCGTGTTATTGCGTCAGGCGAATGACAATCGCCAGTAA", + "dna_sequence_length": 1122, + "functions": [ + "fused chorismate mutase T/prephenate dehydrogenase" + ], + "id": "CDS_2579", + "location": [ + [ + "NC_000913", + 2740069, + "-", + 1122 + ] + ], + "md5": "18ee1efa9b6e44e3a8acf4d0f23c6f63", + "parent_gene": "", + "protein_md5": "6cd6d53860acfb56bf017bb8bc68fc51", + "protein_translation": "MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNGPLQAMLVAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ", + "protein_translation_length": 373, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008549" + ], + [ + "gene_synonym", + "ECK2598" + ], + [ + "gene_synonym", + "EcoGene:EG10078" + ], + [ + "gene_synonym", + "GI:16130522" + ], + [ + "gene_synonym", + "GeneID:947084" + ], + [ + "gene_synonym", + "JW2582" + ], + [ + "gene_synonym", + "NP_417092.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00888" + ], + [ + "gene_synonym", + "aroF" + ], + [ + "gene_synonym", + "b2601" + ] + ], + "dna_sequence": "ATGCAAAAAGACGCGCTGAATAACGTACATATTACCGACGAACAGGTTTTAATGACTCCGGAACAACTGAAGGCCGCTTTTCCATTGAGCCTGCAACAAGAAGCCCAGATTGCTGACTCGCGTAAAAGCATTTCAGATATTATCGCCGGGCGCGATCCTCGTCTGCTGGTAGTATGTGGTCCTTGTTCCATTCATGATCCGGAAACTGCTCTGGAATATGCTCGTCGATTTAAAGCCCTTGCCGCAGAGGTCAGCGATAGCCTCTATCTGGTAATGCGCGTCTATTTTGAAAAACCCCGTACCACTGTCGGCTGGAAAGGGTTAATTAACGATCCCCATATGGATGGCTCTTTTGATGTAGAAGCCGGGCTGCAGATCGCGCGTAAATTGCTGCTTGAGCTGGTGAATATGGGACTGCCACTGGCGACGGAAGCGTTAGATCCGAATAGCCCGCAATACCTGGGCGATCTGTTTAGCTGGTCAGCAATTGGTGCTCGTACAACGGAATCGCAAACTCACCGTGAAATGGCCTCCGGGCTTTCCATGCCGGTTGGTTTTAAAAACGGCACCGACGGCAGTCTGGCAACAGCAATTAACGCTATGCGCGCCGCCGCCCAGCCGCACCGTTTTGTTGGCATTAACCAGGCAGGGCAGGTTGCGTTGCTACAAACTCAGGGGAATCCGGACGGCCATGTGATCCTGCGCGGTGGTAAAGCGCCGAACTATAGCCCTGCGGATGTTGCGCAATGTGAAAAAGAGATGGAACAGGCGGGACTGCGCCCGTCTCTGATGGTAGATTGCAGCCACGGTAATTCCAATAAAGATTATCGCCGTCAGCCTGCGGTGGCAGAATCCGTGGTTGCTCAAATCAAAGATGGCAATCGCTCAATTATTGGTCTGATGATCGAAAGTAATATCCACGAGGGCAATCAGTCTTCCGAGCAACCGCGCAGTGAAATGAAATACGGTGTATCCGTAACCGATGCCTGCATTAGCTGGGAAATGACCGATGCCTTGCTGCGTGAAATTCATCAGGATCTGAACGGGCAGCTGACGGCTCGCGTGGCTTAA", + "dna_sequence_length": 1071, + "functions": [ + "3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible" + ], + "id": "CDS_2580", + "location": [ + [ + "NC_000913", + 2741150, + "-", + 1071 + ] + ], + "md5": "33bdad3190088d5a016d54a8f7f3b180", + "parent_gene": "", + "protein_md5": "f8d0f856f4cb32d74c9e1d3c01317ac0", + "protein_translation": "MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKSISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHQDLNGQLTARVA", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008565" + ], + [ + "gene_synonym", + "ECK2599" + ], + [ + "gene_synonym", + "EcoGene:EG12446" + ], + [ + "gene_synonym", + "GI:90111465" + ], + [ + "gene_synonym", + "GeneID:947106" + ], + [ + "gene_synonym", + "JW5412" + ], + [ + "gene_synonym", + "NP_417093.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11289" + ], + [ + "gene_synonym", + "b2602" + ], + [ + "gene_synonym", + "yfiL" + ] + ], + "dna_sequence": "ATGATGAAAAAGTTTATCGCCCCCTTGTTGGCTTTACTGGTTAGCGGATGTCAGATTGATCCTTATACTCACGCGCCAACCTTGACCAGCACCGACTGGTATGATGTCGGTATGGAAGATGCGATATCGGGCAGCGCCATAAAAGATGACGATGCATTTAGCGATTCACAGGCGGATCGCGGTCTATACCTTAAAGGATATGCCGAAGGACAAAAGAAAACTTGCCAGACCGATTTTACTTATGCCCGAGGACTTTCCGGTAAAAGCTTTCCTGCCAGCTGCAACAATGTTGAAAATGCCAGCCAACTGCATGAAGTATGGCAAAAAGGGGCTGATGAAAATGCCAGCACAATACGATTAAATTAA", + "dna_sequence_length": 366, + "functions": [ + "lipoprotein" + ], + "id": "CDS_2581", + "location": [ + [ + "NC_000913", + 2741360, + "+", + 366 + ] + ], + "md5": "c432e692a3cf1b15aa3f3d8e02cf3d5d", + "parent_gene": "", + "protein_md5": "1c1cb437efd7b028aed534728d4005d3", + "protein_translation": "MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASTIRLN", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008568" + ], + [ + "gene_synonym", + "ECK2600" + ], + [ + "gene_synonym", + "EcoGene:EG14225" + ], + [ + "gene_synonym", + "GI:16130524" + ], + [ + "gene_synonym", + "GeneID:947090" + ], + [ + "gene_synonym", + "JW2584" + ], + [ + "gene_synonym", + "NP_417094.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64548" + ], + [ + "gene_synonym", + "b2603" + ], + [ + "gene_synonym", + "yfiR" + ] + ], + "dna_sequence": "ATGCGTTTTTCTCACCGACTGTTCTTACTTCTGATTCTCCTGCTGACGGGAGCACCAATACTCGCTCAGGAGCCTTCTGACGTTGCGAAAAACGTGCGTATGATGGTTTCCGGTATTGTCAGTTACACCCGCTGGCCTGCGCTATCAGGGCCACCAAAGTTATGTATCTTTTCATCTTCACGTTTTAGTACCGCCCTACAAGAGAATGCCGCGACATCTTTGCCTTATCTGCCTGTCATCATTCACACTCAACAAGAGGCGATGATTTCAGGCTGCAATGGTTTTTATTTTGGCAACGAGTCACCGACATTCCAGATGGAATTAACCGAACAATATCCGTCAAAGGCGTTATTATTAATTGCCGAACAAAATACCGAGTGCATTATTGGTAGCGCCTTTTGTCTGATCATCCACAATAATGACGTCAGATTTGCCGTAAACCTGGATGCCTTATCGCGTAGCGGTGTAAAGGTCAACCCGGATGTCTTAATGCTCGCACGGAAGAAAAATGATGGATAA", + "dna_sequence_length": 519, + "functions": [ + "putative periplasmic inhibitor of YfiN activity" + ], + "id": "CDS_2582", + "location": [ + [ + "NC_000913", + 2741875, + "+", + 519 + ] + ], + "md5": "cd2c089505ca3ff2abf75dfacfcb702c", + "parent_gene": "", + "protein_md5": "0f1a1505a92b1343234682838ca09b1f", + "protein_translation": "MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008570" + ], + [ + "gene_synonym", + "ECK2601" + ], + [ + "gene_synonym", + "EcoGene:EG12880" + ], + [ + "gene_synonym", + "GI:16130525" + ], + [ + "gene_synonym", + "GeneID:947091" + ], + [ + "gene_synonym", + "JW2585" + ], + [ + "gene_synonym", + "NP_417095.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46139" + ], + [ + "gene_synonym", + "b2604" + ], + [ + "gene_synonym", + "yfiN" + ] + ], + "dna_sequence": "ATGATGGATAACGATAATTCTCTTAATAAGCGCCCCACGTTTAAAAGAGCATTACGCAACATCAGTATGACCAGCATATTTATCACTATGATGCTGATCTGGTTGCTGCTTTCCGTGACCTCGGTGCTGACCCTGAAACAGTACGCGCAAAAAAACCTGGCACTGACAGCAGCAACAATGACTTACAGTCTGGAAGCAGCTGTCGTTTTTGCCGATGGCCCTGCAGCAACTGAAACACTGGCAGCGCTGGGCCAGCAAGGGCAATTTTCAACTGCAGAAGTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGAAGCGCTGAAAAATATCACCGATGTCGTACATGATGTGCGTTCCAACCGCAATTTTTCCCGACGAGTTTCGGAAGAACGTATCGCTGAGTTTCACCGCTTCGCTCTCGACTTCAACAGTCTGCTGGATGAAATGGAAGAGTGGCAGCTTCGTTTACAGGCTAAAAATGCGCAGCTTCTACGTACCGCGCTACATGACCCATTAACCGGGCTGGCTAACCGCGCAGCGTTTCGTAGCGGCATCAACACGTTGATGAACAATTCCGATGCCCGAAAAACGTCGGCGTTACTATTTCTTGATGGCGATAATTTCAAATACATCAATGATACCTGGGGTCATGCGACGGGCGATAGAGTCTTGATTGAAATCGCAAAACGGTTAGCTGAATTTGGCGGGCTGCGACATAAAGCATACCGCCTGGGCGGCGATGAATTCGCTATGGTGCTCTATGATGTACAGTCGGAATCTGAAGTGCAGCAGATATGTTCAGCACTGACACAAATCTTTAATCTCCCGTTTGATCTTCATAATGGCCATCAGACCACCATGACATTAAGCATTGGTTACGCGATGACCATTGAGCACGCCTCTGCGGAAAAATTACAAGAGCTTGCCGATCACAATATGTATCAGGCCAAACACCAGCGTGCCGAAAAGCTGGTGAGATAA", + "dna_sequence_length": 1227, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_2583", + "location": [ + [ + "NC_000913", + 2742383, + "+", + 1227 + ] + ], + "md5": "6506dd1e3e4de814c3fea15ef4a50c00", + "parent_gene": "", + "protein_md5": "270947e26c6d0c17d91bf3c80fdcd3df", + "protein_translation": "MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008572" + ], + [ + "gene_synonym", + "ECK2602" + ], + [ + "gene_synonym", + "EcoGene:EG11152" + ], + [ + "gene_synonym", + "GI:16130526" + ], + [ + "gene_synonym", + "GeneID:947094" + ], + [ + "gene_synonym", + "JW2586" + ], + [ + "gene_synonym", + "NP_417096.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07021" + ], + [ + "gene_synonym", + "b2605" + ], + [ + "gene_synonym", + "yfiB" + ] + ], + "dna_sequence": "ATGATAAAGCACCTGGTAGCACCCCTGGTTTTCACCTCACTAATACTGACTGGCTGCCAGTCCCCTCAGGGAAAGTTTACTCCTGAGCAAGTCGCCGCTATGCAATCTTATGGATTTACTGAATCCGCCGGCGACTGGTCGCTGGGCTTATCAGATGCCATTCTGTTCGCAAAAAATGACTACAAATTGCTCCCGGAAAGCCAGCAACAGATCCAAACCATGGCAGCTAAATTGGCCTCGACAGGGCTAACACATGCCCGTATGGATGGACACACCGATAACTATGGTGAAGACAGTTACAACGAAGGCTTATCATTGAAACGGGCGAATGTCGTGGCCGATGCATGGGCTATGGGTGGACAAATTCCACGCAGCAATCTCACCACACAGGGTTTAGGAAAAAAATATCCCATAGCCAGTAACAAGACCGCCCAGGGCCGCGCCGAGAACCGCCGCGTCGCAGTGGTGATTACTACCCCTTAA", + "dna_sequence_length": 483, + "functions": [ + "OM lipoprotein putative positive effector of YfiN activity" + ], + "id": "CDS_2584", + "location": [ + [ + "NC_000913", + 2743625, + "+", + 483 + ] + ], + "md5": "7c5e2196272831d7509dc552292fb34c", + "parent_gene": "", + "protein_md5": "01810fdaf7e82a4eab1431799e66d066", + "protein_translation": "MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008574" + ], + [ + "gene_synonym", + "ECK2603" + ], + [ + "gene_synonym", + "EcoGene:EG10880" + ], + [ + "gene_synonym", + "GI:16130527" + ], + [ + "gene_synonym", + "GeneID:947096" + ], + [ + "gene_synonym", + "JW2587" + ], + [ + "gene_synonym", + "NP_417097.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7K6" + ], + [ + "gene_synonym", + "b2606" + ], + [ + "gene_synonym", + "rplS" + ] + ], + "dna_sequence": "ATGAGCAACATTATTAAGCAACTTGAACAAGAGCAGATGAAGCAGGACGTACCTTCCTTCCGTCCGGGTGATACCGTGGAAGTGAAAGTATGGGTTGTTGAAGGTTCCAAAAAACGTCTGCAGGCATTCGAGGGCGTGGTTATCGCTATTCGTAACCGCGGTCTGCACTCTGCATTCACTGTTCGTAAAATTTCCAACGGCGAAGGCGTTGAGCGTGTCTTCCAGACTCACTCTCCGGTAGTTGACAGCATTTCTGTCAAACGTCGTGGTGCTGTTCGTAAAGCTAAACTGTACTACCTGCGTGAGCGTACTGGTAAGGCTGCTCGTATCAAAGAGCGTCTTAACTAA", + "dna_sequence_length": 348, + "functions": [ + "50S ribosomal subunit protein L19" + ], + "id": "CDS_2585", + "location": [ + [ + "NC_000913", + 2744530, + "-", + 348 + ] + ], + "md5": "a2f4530b10b80d4ef706ae269f8fc56a", + "parent_gene": "", + "protein_md5": "f5a64710e99eaf586d30566f0129af5e", + "protein_translation": "MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008576" + ], + [ + "gene_synonym", + "ECK2604" + ], + [ + "gene_synonym", + "EcoGene:EG11023" + ], + [ + "gene_synonym", + "GI:16130528" + ], + [ + "gene_synonym", + "GeneID:947099" + ], + [ + "gene_synonym", + "JW2588" + ], + [ + "gene_synonym", + "NP_417098.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A873" + ], + [ + "gene_synonym", + "b2607" + ], + [ + "gene_synonym", + "trmD" + ] + ], + "dna_sequence": "ATGTGGATTGGCATAATTAGCCTGTTTCCTGAAATGTTCCGCGCAATTACCGATTACGGGGTAACTGGCCGGGCAGTTAAAAATGGCCTGCTGAGCATCCAGAGCTGGAGTCCTCGCGACTTCACGCATGACCGGCACCGTACCGTGGACGATCGTCCTTACGGCGGCGGACCGGGGATGTTAATGATGGTGCAACCCTTGCGGGACGCCATTCATGCAGCAAAAGCCGCGGCGGGTGAAGGCGCAAAGGTGATTTATCTGTCACCACAGGGACGCAAGCTTGATCAAGCGGGCGTCAGCGAACTGGCAACGAATCAAAAATTGATTCTGGTGTGCGGTCGCTACGAAGGTATAGATGAGCGCGTGATCCAAACCGAAATTGACGAAGAATGGTCAATCGGCGATTACGTTCTCAGTGGTGGTGAGTTACCAGCAATGACGCTGATTGACTCCGTTTCCCGGTTTATTCCGGGAGTACTGGGACATGAAGCCTCGGCAACGGAAGATTCCTTTGCTGAAGGATTGCTGGATTGCCCGCACTATACGCGGCCTGAGGTGTTAGAAGGGATGGAAGTTCCGCCAGTGTTACTGTCGGGCAACCATGCCGAGATACGTCGCTGGCGTTTGAAACAGTCGCTGGGCCGTACCTGGCTTAGAAGACCTGAACTTCTGGAAAACCTGGCTCTGACTGAAGAGCAAGCAAGGTTGCTGGCGGAGTTCAAAACGGAACACGCACAACAGCAACATAAACATGATGGGATGGCGTAA", + "dna_sequence_length": 768, + "functions": [ + "tRNA m(1)G37 methyltransferase, SAM-dependent" + ], + "id": "CDS_2586", + "location": [ + [ + "NC_000913", + 2745339, + "-", + 768 + ] + ], + "md5": "2e880d24601264845877c3a0b5ea002e", + "parent_gene": "", + "protein_md5": "2ada1d8c9a5eb60c0809f05c5353ff39", + "protein_translation": "MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008579" + ], + [ + "gene_synonym", + "ECK2605" + ], + [ + "gene_synonym", + "EcoGene:EG11153" + ], + [ + "gene_synonym", + "GI:90111466" + ], + [ + "gene_synonym", + "GeneID:947101" + ], + [ + "gene_synonym", + "JW5413" + ], + [ + "gene_synonym", + "NP_417099.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7X6" + ], + [ + "gene_synonym", + "b2608" + ], + [ + "gene_synonym", + "rimM" + ], + [ + "gene_synonym", + "yfjA" + ] + ], + "dna_sequence": "ATGAGCAAACAACTCACCGCGCAAGCACCTGTTGATCCCATCGTTTTGGGAAAAATGGGTTCGTCTTACGGTATTCGTGGGTGGCTCAGAGTGTTTTCTTCCACCGAAGACGCCGAAAGCATTTTTGACTATCAGCCCTGGTTTATCCAGAAGGCGGGTCAGTGGCAGCAAGTCCAGCTGGAAAGCTGGAAGCACCACAATCAGGACATGATCATCAAGCTGAAAGGCGTTGACGATCGTGATGCGGCGAACCTGCTGACGAATTGTGAAATTGTCGTGGATTCATCGCAGCTGCCTCAGCTTGAAGAGGGGGACTACTACTGGAAAGACCTGATGGGCTGCCAGGTAGTAACCACTGAAGGCTACGATCTCGGTAAAGTCGTCGATATGATGGAAACCGGATCTAATGACGTTCTCGTCATTAAGGCAAACCTGAAAGATGCGTTTGGTATCAAGGAACGTCTCGTACCGTTCCTCGATGGGCAGGTTATCAAGAAAGTCGATCTCACTACTCGTTCAATCGAAGTAGATTGGGATCCTGGTTTTTAA", + "dna_sequence_length": 549, + "functions": [ + "ribosome maturation factor" + ], + "id": "CDS_2587", + "location": [ + [ + "NC_000913", + 2745918, + "-", + 549 + ] + ], + "md5": "7864ddfd76f6e9051114171e76465014", + "parent_gene": "", + "protein_md5": "c07d27980fe1955e3a121e88359a12bc", + "protein_translation": "MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008583" + ], + [ + "gene_synonym", + "ECK2606" + ], + [ + "gene_synonym", + "EcoGene:EG10915" + ], + [ + "gene_synonym", + "GI:16130530" + ], + [ + "gene_synonym", + "GeneID:947103" + ], + [ + "gene_synonym", + "JW2590" + ], + [ + "gene_synonym", + "NP_417100.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7T3" + ], + [ + "gene_synonym", + "b2609" + ], + [ + "gene_synonym", + "rpsP" + ] + ], + "dna_sequence": "ATGGTAACTATTCGTTTAGCACGTCACGGCGCTAAAAAGCGTCCGTTCTACCAGGTTGTTGTCGCTGACAGCCGTAATGCACGCAACGGTCGCTTCATCGAGCGCGTTGGTTTCTTCAACCCAATCGCTAGCGAAAAAGAAGAAGGCACTCGCCTGGATCTGGATCGCATCGCTCACTGGGTTGGCCAGGGCGCAACTATTTCTGATCGCGTTGCTGCGCTGATCAAAGAAGTAAACAAAGCAGCTTAA", + "dna_sequence_length": 249, + "functions": [ + "30S ribosomal subunit protein S16" + ], + "id": "CDS_2588", + "location": [ + [ + "NC_000913", + 2746185, + "-", + 249 + ] + ], + "md5": "8214cf3afe393fc23141af755a5a43ca", + "parent_gene": "", + "protein_md5": "1b64f96e17b3232b18d4f8cfe5373512", + "protein_translation": "MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008586" + ], + [ + "gene_synonym", + "ECK2607" + ], + [ + "gene_synonym", + "EcoGene:EG10300" + ], + [ + "gene_synonym", + "GI:16130531" + ], + [ + "gene_synonym", + "GeneID:947102" + ], + [ + "gene_synonym", + "JW5414" + ], + [ + "gene_synonym", + "NP_417101.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGD7" + ], + [ + "gene_synonym", + "b2610" + ], + [ + "gene_synonym", + "ffh" + ] + ], + "dna_sequence": "ATGTTTGATAATTTAACCGATCGTTTGTCGCGCACGCTGCGCAATATCAGTGGCCGTGGACGCCTCACTGAAGACAACGTAAAAGATACGCTGCGCGAAGTGCGCATGGCGCTGCTGGAGGCGGACGTAGCTCTGCCGGTAGTGCGTGAGTTTATCAATCGCGTAAAAGAGAAAGCGGTTGGTCATGAAGTTAATAAGAGCCTGACGCCGGGGCAGGAGTTCGTCAAAATAGTCCGTAACGAACTGGTTGCGGCGATGGGCGAAGAGAACCAGACCCTGAACCTGGCTGCGCAACCGCCTGCGGTCGTACTGATGGCGGGCCTGCAAGGTGCCGGTAAAACAACCAGCGTTGGTAAACTCGGTAAGTTCCTGCGCGAGAAGCACAAGAAGAAAGTGCTGGTGGTTTCTGCCGACGTTTATCGCCCGGCGGCAATCAAACAGCTTGAGACGCTGGCAGAGCAGGTGGGCGTTGATTTCTTCCCTTCTGATGTTGGTCAGAAGCCGGTAGATATCGTTAACGCGGCGCTGAAAGAAGCCAAACTGAAATTCTACGACGTGCTGCTGGTGGATACCGCTGGTCGTCTGCACGTTGACGAAGCGATGATGGACGAGATCAAACAAGTCCATGCGTCGATTAACCCGGTTGAAACCCTGTTTGTGGTTGACGCCATGACCGGTCAGGATGCGGCCAATACGGCAAAAGCATTCAATGAAGCGTTACCGCTTACCGGCGTAGTGTTGACCAAAGTGGACGGCGATGCCCGCGGCGGTGCGGCGCTCTCTATTCGTCACATCACTGGCAAACCGATCAAGTTCCTCGGTGTTGGCGAGAAAACTGAGGCGCTGGAGCCGTTCCATCCGGACCGCATCGCGTCGCGTATTCTCGGCATGGGCGACGTACTGTCGCTGATCGAAGATATCGAAAGCAAAGTTGACCGCGCGCAGGCAGAGAAATTAGCCAGCAAGCTGAAAAAAGGTGACGGCTTCGATCTCAACGACTTTCTTGAGCAGCTGCGCCAGATGAAAAATATGGGCGGCATGGCTAGTCTGATGGGCAAGCTGCCGGGCATGGGGCAGATCCCGGATAACGTCAAGTCACAGATGGACGATAAAGTGCTGGTGCGTATGGAAGCCATCATCAACTCGATGACGATGAAAGAGCGCGCTAAGCCAGAAATCATCAAAGGTTCGCGTAAACGCCGTATTGCTGCCGGTTGCGGTATGCAGGTGCAGGACGTTAACCGTCTTCTGAAACAGTTCGACGACATGCAGCGCATGATGAAGAAAATGAAGAAGGGCGGAATGGCGAAGATGATGAGAAGCATGAAGGGTATGATGCCCCCAGGCTTCCCTGGTCGCTAA", + "dna_sequence_length": 1362, + "functions": [ + "Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)" + ], + "id": "CDS_2589", + "location": [ + [ + "NC_000913", + 2747795, + "-", + 1362 + ] + ], + "md5": "e565f9b4ba8b9e0c058e2566296dbff9", + "parent_gene": "", + "protein_md5": "dc53afad12a0f784058f00d211e93e90", + "protein_translation": "MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008591" + ], + [ + "gene_synonym", + "ECK2608" + ], + [ + "gene_synonym", + "EcoGene:EG14226" + ], + [ + "gene_synonym", + "GI:145698303" + ], + [ + "gene_synonym", + "GeneID:947098" + ], + [ + "gene_synonym", + "JW2592" + ], + [ + "gene_synonym", + "NP_417102.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64432" + ], + [ + "gene_synonym", + "b2611" + ], + [ + "gene_synonym", + "corE" + ], + [ + "gene_synonym", + "ypjD" + ] + ], + "dna_sequence": "ATGCCCGTTTTTGCTCTGCTCGCGCTTGTCGCCTACTCCGTCAGTCTTGCGCTGATTGTTCCCGGTCTGCTGCAAAAAAACGGCGGCTGGCGGCGCATGGCTATTATTTCTGCGGTCATTGCGCTGGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTGGCGCTGGCAACCTTCATGCCCAATGAATACATCACCCATCTGGAAGCTACGCCTGGGATGCTGGTGCACATTGGCTTATCGCTCTTTTCCTATGCCACGCTAATTATCGCCGCCCTGTACGCGCTGCAACTGGCGTGGATTGATTACCAACTGAAGAACAAGAAGCTGGCGTTTAACCAGGAAATGCCGCCATTGATGAGTATCGAGCGTAAAATGTTCCACATCACGCAGATTGGCGTGGTGCTGCTAACGCTCACGCTTTGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAA", + "dna_sequence_length": 792, + "functions": [ + "cytochrome c assembly protein family inner membrane protein" + ], + "id": "CDS_2590", + "location": [ + [ + "NC_000913", + 2747962, + "+", + 792 + ] + ], + "md5": "9b85f692599927d9461ded10e0b71945", + "parent_gene": "", + "protein_md5": "aa465c0130340602a4ca7e1fbe23639e", + "protein_translation": "MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLAYFGSRIVQQLIS", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174111" + ], + [ + "gene_synonym", + "ECK2609" + ], + [ + "gene_synonym", + "EcoGene:EG12442" + ], + [ + "gene_synonym", + "GI:145698304" + ], + [ + "gene_synonym", + "GeneID:2847739" + ], + [ + "gene_synonym", + "JW5415" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37908" + ], + [ + "gene_synonym", + "YP_026171.3" + ], + [ + "gene_synonym", + "b4461" + ], + [ + "gene_synonym", + "corB" + ], + [ + "gene_synonym", + "corF" + ], + [ + "gene_synonym", + "yfjD" + ], + [ + "gene_synonym", + "ypjE" + ] + ], + "dna_sequence": "CTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGTAAGCCAGACCGCCTGATAAGCCTGGTGTTAATCGGCAATAACCTGGTCAATATTCTTGCCTCCGCGCTCGGCACTATTGTTGGGATGCGTTTGTACGGCGATGCGGGCGTGGCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATGCGCATGATGGGTATCAAAACCGATATCGTGGTTAGCGGCTCTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCTCCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCGGTTGATGTCGGAGAAAAAAGAGTTCACCAAAGAAACCATGCTGCGCGCCGCGGACGAGATCTATTTTGTGCCGGAAGGTACGCCGCTCAGCACGCAGTTGGTAAAGTTTCAGCGCAACAAAAAGAAAGTCGGCCTGGTCGTCAACGAGTATGGAGACATTCAGGGGCTGGTGACGGTTGAAGATATTCTGGAAGAGATTGTCGGCGATTTCACTACGTCGATGTCGCCAACACTTGCCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAA", + "dna_sequence_length": 1287, + "functions": [ + "UPF0053 family inner membrane protein" + ], + "id": "CDS_2591", + "location": [ + [ + "NC_000913", + 2748774, + "+", + 1287 + ] + ], + "md5": "93000a7b117c1d02be35d1eecac73694", + "parent_gene": "", + "protein_md5": "998c9a334f6a97eb12171b417bf2fa0a", + "protein_translation": "MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008598" + ], + [ + "gene_synonym", + "ECK2610" + ], + [ + "gene_synonym", + "EcoGene:EG10416" + ], + [ + "gene_synonym", + "GI:16130533" + ], + [ + "gene_synonym", + "GeneID:947097" + ], + [ + "gene_synonym", + "JW2594" + ], + [ + "gene_synonym", + "NP_417104.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09372" + ], + [ + "gene_synonym", + "b2614" + ], + [ + "gene_synonym", + "grpE" + ] + ], + "dna_sequence": "ATGAGTAGTAAAGAACAGAAAACGCCTGAGGGGCAAGCCCCGGAAGAAATTATCATGGATCAGCACGAAGAGATTGAGGCAGTTGAGCCAGAAGCTTCTGCTGAGCAGGTGGATCCGCGCGATGAAAAAGTTGCGAATCTCGAAGCTCAGCTGGCTGAAGCCCAGACCCGTGAACGTGACGGCATTTTGCGTGTAAAAGCCGAAATGGAAAACCTGCGTCGTCGTACTGAACTGGATATTGAAAAAGCCCACAAATTCGCGCTGGAGAAATTCATCAACGAATTGCTGCCGGTGATTGATAGCCTGGATCGTGCGCTGGAAGTGGCTGATAAAGCTAACCCGGATATGTCTGCGATGGTTGAAGGCATTGAGCTGACGCTGAAGTCGATGCTGGATGTTGTGCGTAAGTTTGGCGTTGAAGTGATCGCCGAAACTAACGTCCCACTGGACCCGAATGTGCATCAGGCCATCGCAATGGTGGAATCTGATGACGTTGCGCCAGGTAACGTACTGGGCATTATGCAGAAGGGTTATACGCTGAATGGTCGTACGATTCGTGCGGCGATGGTTACTGTAGCGAAAGCAAAAGCTTAA", + "dna_sequence_length": 594, + "functions": [ + "heat shock protein" + ], + "id": "CDS_2592", + "location": [ + [ + "NC_000913", + 2750708, + "-", + 594 + ] + ], + "md5": "bf149bc2b58cf6c8bae5365ef51156a7", + "parent_gene": "", + "protein_md5": "fbe5b850e94fe0776f8add514946b672", + "protein_translation": "MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008603" + ], + [ + "gene_synonym", + "ECK2611" + ], + [ + "gene_synonym", + "EcoGene:EG12192" + ], + [ + "gene_synonym", + "GI:16130534" + ], + [ + "gene_synonym", + "GeneID:947092" + ], + [ + "gene_synonym", + "JW2596" + ], + [ + "gene_synonym", + "NP_417105.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7B3" + ], + [ + "gene_synonym", + "b2615" + ], + [ + "gene_synonym", + "nadK" + ], + [ + "gene_synonym", + "yfjB" + ], + [ + "gene_synonym", + "yfjE" + ] + ], + "dna_sequence": "ATGAATAATCATTTCAAGTGTATTGGCATTGTGGGACACCCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTAATATGCTGGGCGCGGCACGCACACTCGCCCGTTACGATATTAAAGTTATTGGAATCAACCGTGGCAACCTGGGTTTCCTGACTGACCTTGACCCCGATAACGCCCAGCAACAGTTAGCCGATGTGCTGGAAGGCCACTACATCAGCGAGAAACGTTTTTTGCTGGAAGCGCAAGTCTGTCAGCAAGATTGCCAGAAACGCATCAGCACCGCGATAAATGAAGTGGTGCTTCATCCAGGCAAAGTGGCGCATATGATTGAGTTCGAAGTGTATATCGACGAGATCTTTGCGTTTTCTCAGCGATCTGATGGACTAATTATTTCGACGCCAACAGGCTCCACCGCCTATTCCCTCTCTGCAGGCGGTCCTATTCTGACCCCCTCTCTGGATGCGATTACCCTGGTGCCCATGTTCCCGCATACGTTGTCAGCACGACCACTGGTCATAAACAGCAGCAGCACGATCCGTCTGCGTTTTTCGCATCGCCGTAACGACCTGGAAATCAGTTGCGACAGCCAGATAGCACTGCCGATTCAGGAAGGTGAAGATGTCCTGATTCGTCGCTGTGATTACCATCTGAATCTGATTCATCCGAAAGATTACAGTTATTTCAACACATTAAGCACCAAGCTCGGCTGGTCAAAAAAATTATTCTAA", + "dna_sequence_length": 879, + "functions": [ + "NAD kinase" + ], + "id": "CDS_2593", + "location": [ + [ + "NC_000913", + 2750831, + "+", + 879 + ] + ], + "md5": "4cc43f2ccde04b69b17df7223c1c1d31", + "parent_gene": "", + "protein_md5": "3bac1bedfe1fa3f39f582def0ca2d035", + "protein_translation": "MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008611" + ], + [ + "gene_synonym", + "ECK2612" + ], + [ + "gene_synonym", + "EcoGene:EG10831" + ], + [ + "gene_synonym", + "GI:49176247" + ], + [ + "gene_synonym", + "GeneID:947105" + ], + [ + "gene_synonym", + "JW5416" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05824" + ], + [ + "gene_synonym", + "YP_026172.1" + ], + [ + "gene_synonym", + "b2616" + ], + [ + "gene_synonym", + "radB" + ], + [ + "gene_synonym", + "recN" + ] + ], + "dna_sequence": "ATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTGAGCTTGAGATTGATTTTCATAGCGGCATGACCGTAATAACTGGCGAGACCGGCGCGGGTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCGTTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGCGTGATCAGCAGCGATGGTCGCTCCCGTGGTTTCATCAACGGTACAGCTGTTCCTCTGTCACAACTGCGCGAACTGGGTCAGTTGCTGATTCAGATCCATGGTCAGCACGCTCATCAATTACTCACCAAACCTGAGCACCAAAAATTCCTGCTTGATGGCTATGCCAATGAAACCTCTCTACTGCAGGAAATGACCGCACGTTATCAGTTGTGGCATCAAAGCTGCCGTGACCTCGCGCATCATCAACAGTTAAGTCAGGAACGCGCCGCCCGTGCGGAACTGCTGCAATACCAATTAAAAGAACTTAACGAATTTAATCCGCAGCCCGGAGAGTTTGAACAAATCGACGAAGAGTACAAACGTCTGGCGAACAGCGGTCAATTGCTGACCACCAGCCAGAATGCATTGGCATTAATGGCCGACGGTGAAGACGCAAACCTGCAAAGTCAGCTTTACACGGCTAAACAACTGGTGAGCGAATTGATTGGCATGGACAGCAAACTGTCCGGCGTACTTGATATGCTGGAAGAAGCTACCATCCAGATTGCTGAAGCCAGCGATGAACTGCGCCACTACTGCGATCGTCTGGATCTCGATCCCAACCGACTATTTGAACTTGAACAGCGCATCTCAAAACAGATTTCGCTGGCACGTAAACATCACGTCAGCCCTGAGGCATTGCCACAGTATTACCAGTCGCTACTGGAAGAACAGCAGCAACTGGACGATCAGGCCGACTCACAAGAAACGCTTGCGCTGGCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGCCAGCAATATGCAGAAGAACTTGCACAGCTGATCACCGACAGTATGCATGCGCTCTCAATGCCGCATGGGCAGTTTACGATCGATGTTAAATTTGACGAGCATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGCGCGTAAAATGGAAACCCCGGCACTGATTTTTGATGAAGTGGATGTAGGGATTAGCGGTCCAACAGCGGCAGTTGTCGGCAAACTGCTGCGTCAACTCGGCGAATCAACTCAGGTGATGTGTGTTACCCACCTGCCACAAGTCGCGGGATGTGGTCATCAACACTATTTTGTCAGCAAAGAAACCGATGGTGCGATGACAGAAACGCATATGCAATCCCTGAATAAAAAAGCGCGGTTACAAGAGCTGGCGCGCCTGCTTGGTGGCAGTGAAGTCACACGTAATACACTGGCGAATGCGAAAGAACTGCTTGCAGCGTAA", + "dna_sequence_length": 1662, + "functions": [ + "recombination and repair protein" + ], + "id": "CDS_2594", + "location": [ + [ + "NC_000913", + 2751795, + "+", + 1662 + ] + ], + "md5": "439e43c9d0c502666ed424d9ad78cf56", + "parent_gene": "", + "protein_md5": "3f13b085f914ab08613735e6fafbafe5", + "protein_translation": "MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA", + "protein_translation_length": 553, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008614" + ], + [ + "gene_synonym", + "ECK2613" + ], + [ + "gene_synonym", + "EcoGene:EG10952" + ], + [ + "gene_synonym", + "GI:90111468" + ], + [ + "gene_synonym", + "GeneID:945583" + ], + [ + "gene_synonym", + "JW2598" + ], + [ + "gene_synonym", + "NP_417107.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A937" + ], + [ + "gene_synonym", + "b2617" + ], + [ + "gene_synonym", + "bamE" + ], + [ + "gene_synonym", + "smpA" + ], + [ + "gene_synonym", + "smqA" + ] + ], + "dna_sequence": "ATGCGCTGTAAAACGCTGACTGCTGCAGCAGCAGTACTATTGATGTTGACCGCAGGCTGTTCCACTCTGGAGCGAGTGGTTTACCGTCCTGACATCAACCAGGGGAACTATCTGACCGCTAACGACGTATCCAAAATACGTGTTGGCATGACGCAACAACAAGTTGCGTACGCATTGGGTACACCGCTGATGTCCGATCCATTTGGTACGAATACCTGGTTCTATGTCTTCCGCCAGCAACCAGGTCATGAAGGTGTAACTCAGCAAACGCTGACGCTGACCTTTAACAGTAGCGGTGTGTTGACCAATATTGATAACAAACCTGCGCTGAGTGGTAACTAA", + "dna_sequence_length": 342, + "functions": [ + "lipoprotein component of BamABCDE OM biogenesis complex" + ], + "id": "CDS_2595", + "location": [ + [ + "NC_000913", + 2753605, + "+", + 342 + ] + ], + "md5": "778b64d5e1c67077727f3790bb49834d", + "parent_gene": "", + "protein_md5": "9eddc944709ec6ef4afe37deef2da94e", + "protein_translation": "MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008616" + ], + [ + "gene_synonym", + "ECK2614" + ], + [ + "gene_synonym", + "EcoGene:EG13192" + ], + [ + "gene_synonym", + "GI:90111469" + ], + [ + "gene_synonym", + "GeneID:945078" + ], + [ + "gene_synonym", + "JW2599" + ], + [ + "gene_synonym", + "NP_417108.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52119" + ], + [ + "gene_synonym", + "b2618" + ], + [ + "gene_synonym", + "pasI" + ], + [ + "gene_synonym", + "ratB" + ], + [ + "gene_synonym", + "yfjF" + ] + ], + "dna_sequence": "GTGCCAGGTAAAATTGCCGTTGAGGTGGCTTATGCGCTACCTGAGAAGCAGTACCTGCAGCGAGTGACGCTGCAGGAGGGCGCGACGGTTGAAGAAGCTATTCGCGCCAGTGGCTTGCTGGAATTGCGTACCGATATCGATTTAACTAAAAACAAAGTCGGCATTTACAGCCGTCCGGCAAAACTAAGCGATAGTGTGCATGATGGCGATCGGGTGGAGATTTATCGCCCTCTCATTGCCGATCCGAAAGAGCTTCGCAGGCAACGAGCAGAAAAATCAGCGAATAAATAA", + "dna_sequence_length": 291, + "functions": [ + "UPF0125 family protein" + ], + "id": "CDS_2596", + "location": [ + [ + "NC_000913", + 2754298, + "-", + 291 + ] + ], + "md5": "d826b971c9f2ae2edefe64b16a99f557", + "parent_gene": "", + "protein_md5": "ea37373f64cdaa5e869e52b76d9cae61", + "protein_translation": "MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008618" + ], + [ + "gene_synonym", + "ECK2615" + ], + [ + "gene_synonym", + "EcoGene:EG13193" + ], + [ + "gene_synonym", + "GI:16130538" + ], + [ + "gene_synonym", + "GeneID:945614" + ], + [ + "gene_synonym", + "JW2600" + ], + [ + "gene_synonym", + "NP_417109.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGL5" + ], + [ + "gene_synonym", + "b2619" + ], + [ + "gene_synonym", + "pasT" + ], + [ + "gene_synonym", + "ratA" + ], + [ + "gene_synonym", + "yfjG" + ] + ], + "dna_sequence": "ATGATATTATTTGTTGGATTTTTGTTGATGGAAATTGTTATGCCTCAGATTAGCCGGACCGCACTGGTACCCTACAGCGCGGAGCAAATGTATCAGTTAGTGAATGACGTTCAGTCTTATCCTCAGTTTTTGCCGGGTTGTACCGGAAGTCGGATTCTGGAGTCCACTCCTGGGCAGATGACTGCGGCGGTAGATGTCTCTAAGGCTGGGATCAGCAAAACGTTTACTACCCGCAACCAGTTGACCAGTAACCAAAGTATTCTTATGAATCTGGTGGATGGGCCGTTCAAGAAATTGATTGGTGGATGGAAGTTTACGCCGCTGAGCCAGGAGGCGTGTCGTATCGAGTTTCATCTCGACTTTGAGTTTACCAATAAGTTGATTGAACTCGCCTTTGGTCGCGTGTTTAAAGAGCTGGCGGCTAATATGGTCCAGGCTTTTACGGTTCGTGCGAAAGAGGTTTACAGTGCCAGGTAA", + "dna_sequence_length": 477, + "functions": [ + "toxic UPF0083 family protein inhibitor of 70S ribosome formation" + ], + "id": "CDS_2597", + "location": [ + [ + "NC_000913", + 2754764, + "-", + 477 + ] + ], + "md5": "b43512f85dca048578648081d99cfc77", + "parent_gene": "", + "protein_md5": "d693b6eca751c54da0bd7de3aa2455b6", + "protein_translation": "MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELAANMVQAFTVRAKEVYSAR", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008622" + ], + [ + "gene_synonym", + "ECK2616" + ], + [ + "gene_synonym", + "EcoGene:EG11782" + ], + [ + "gene_synonym", + "GI:16130539" + ], + [ + "gene_synonym", + "GeneID:947296" + ], + [ + "gene_synonym", + "JW2601" + ], + [ + "gene_synonym", + "NP_417110.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A832" + ], + [ + "gene_synonym", + "b2620" + ], + [ + "gene_synonym", + "smpB" + ], + [ + "gene_synonym", + "smqB" + ] + ], + "dna_sequence": "ATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGTTTGGCGCTAACATCACGCCAATGGCCGTGGCCTCCACGCATGTGGTGTGCGATCCTACCCGTACCCGCAAGTTACTTCTCAACCAGCGCGAACTGGACTCATTGTACGGTCGCGTCAATCGAGAAGGCTATACCGTAGTGGCGCTCTCCCTGTACTGGAAAAATGCCTGGTGCAAAGTGAAAATCGGCGTCGCCAAAGGTAAGAAACAGCACGATAAACGTTCAGATATCAAAGAGCGCGAATGGCAGGTGGATAAAGCACGTATCATGAAAAACGCCCACCGTTAA", + "dna_sequence_length": 483, + "functions": [ + "tmRNA-binding trans-translation protein" + ], + "id": "CDS_2598", + "location": [ + [ + "NC_000913", + 2754896, + "+", + 483 + ] + ], + "md5": "cdc58663bc5a6d6540f6cb471a10f950", + "parent_gene": "", + "protein_md5": "977ce8806a2aa645622b342adb4254db", + "protein_translation": "MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008630" + ], + [ + "gene_synonym", + "ECK2618" + ], + [ + "gene_synonym", + "EcoGene:EG11783" + ], + [ + "gene_synonym", + "GI:16130540" + ], + [ + "gene_synonym", + "GeneID:946160" + ], + [ + "gene_synonym", + "JW2602" + ], + [ + "gene_synonym", + "NP_417111.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32053" + ], + [ + "gene_synonym", + "b2622" + ], + [ + "gene_synonym", + "intA" + ], + [ + "gene_synonym", + "intX" + ], + [ + "gene_synonym", + "slpA" + ] + ], + "dna_sequence": "ATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGGAATTCTCAAGAGGCCAAAACCAATACCTTCTTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGCTTGAGAGAGATATTTTCCCGGCAATCGGTGATATCAGTATCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAGCCGGTTCAGGCCAGAGGTGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGTATTAACGAAGTCATGATTTATGCGCAGAACACAGGCCTGATTGATGCTGTTCCTAGTGTAAATATCGGAAAAGCTTTCGAGAAACCGCAAAAGAAAAACATGCCAAGCATCCGGCCGGATCAACTTCCGCAGCTAATGCACACCATGCGTACGGCAAGTATCAGCATGTCCACAAGATGCCTGTTCATGTGGCAACTTCTAACCATCACCCGCCCTGCCGAAGCTGCTGAGGCTCGATGGGATGAGATCGATTTCAATGCTAGCGAATGGAAAATTCCTGCAGCTCGAATGAAGATGAACCGGGACCATACGGTTCCACTATCTGATGGGGCTCTTGCTATTCTGGAAATGATGAAGCCTCTCAGTGGTGGCCGAGAATTTATCTTTCCTAGCCGTATCAAGCCCAACCAACCAATGAATAGCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAA", + "dna_sequence_length": 1242, + "functions": [ + "CP4-57 prophage", + "integrase" + ], + "id": "CDS_2599", + "location": [ + [ + "NC_000913", + 2756159, + "+", + 1242 + ] + ], + "md5": "71f2c875dab11612617b75dddccbebcc", + "parent_gene": "", + "protein_md5": "30e61deb6f7e668b6dc548cca5114ea6", + "protein_translation": "MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKIRLVG", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008632" + ], + [ + "gene_synonym", + "ECK2619" + ], + [ + "gene_synonym", + "EcoGene:EG13194" + ], + [ + "gene_synonym", + "GI:16130541" + ], + [ + "gene_synonym", + "GeneID:946123" + ], + [ + "gene_synonym", + "JW2603" + ], + [ + "gene_synonym", + "NP_417112.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52123" + ], + [ + "gene_synonym", + "b2623" + ], + [ + "gene_synonym", + "yfjH" + ] + ], + "dna_sequence": "ATGGGTATCTTTAAGGCAAAAAACCCATGTACCAAAAATACAATTTTTACAACCTCTAATACATTGATTTATGGTGGTTTTATGATTTCTCTGAATGATTTTTATGAACAAATTTGTAGAAAACGACGTGATCTCGCCTATCACATGTCCGAATGCGAATGGGCGGTGGATACTGATGTTCTAGAGGAAGATCATCCGGAAATACGGATTGAGCTAGGCAGAATGCGAGAGCAATTCTGGAGCTCTGAGAAAATAGGTACTCGTGTGAGGTTATATTCCTGCGATGTACCATGGGAAACAAGGCACCATACAGTGAATGGGCAACTGGAGATAAAGGAAGAATACACTGAATTATATGATCCAGCTCAAGAATGCTGGAAAAATCTAAGTTCAAACCTTACCAAGGAAACGTTTTTACCTCTTGTTATCGAGCCATTTTCCATTAATGACATTTTCAAGGCACACCTTATGTTCGCCTCAATCTCTTTTTTCTGGGGAAAATCTATCATGTCTGAAAATGAAAACGTTGCCTTTAAAGCATTTCATCGGGCTGCGGAGTTATTTGATAAGTGCATAGGTATGACTTGGTTTAACATCTCTGTTTGTAATCAAAAAAAATTATCAGAAGTCAGGCGGAGTGCAGGAAAGAAGGGTGGCAAAAGCAAAGCGGAAGTGTACCATATCATTCAACTGAAGTTGGTTGAGCTAATTAATGACTCTGTTCCGAATGATGGGTGGAAAAATAAGGTTGTAGCAGTTAATGAACTTATCGAACCGCTATGGGATTTTATTCAAATGTCAGAGTTTGAGATAAATAATCAAAATAAAAAATATCGTGTAGCAACAATGAGTCAAGATGCTTTGGTTGATACTATTTTAAATCAATGGTCTTTAAAAAATGAAGATGTAAAACAAGCTTTCGATAGCGCTGTTCGTAGAAAAAAAAGAAGTAAATAA", + "dna_sequence_length": 957, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2600", + "location": [ + [ + "NC_000913", + 2758600, + "-", + 957 + ] + ], + "md5": "717f2e8b72c3fad429aa89a47ccc27f1", + "parent_gene": "", + "protein_md5": "782765ef099af6a886be7054baf9a2c1", + "protein_translation": "MGIFKAKNPCTKNTIFTTSNTLIYGGFMISLNDFYEQICRKRRDLAYHMSECEWAVDTDVLEEDHPEIRIELGRMREQFWSSEKIGTRVRLYSCDVPWETRHHTVNGQLEIKEEYTELYDPAQECWKNLSSNLTKETFLPLVIEPFSINDIFKAHLMFASISFFWGKSIMSENENVAFKAFHRAAELFDKCIGMTWFNISVCNQKKLSEVRRSAGKKGGKSKAEVYHIIQLKLVELINDSVPNDGWKNKVVAVNELIEPLWDFIQMSEFEINNQNKKYRVATMSQDALVDTILNQWSLKNEDVKQAFDSAVRRKKRSK", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008636" + ], + [ + "gene_synonym", + "ECK2620" + ], + [ + "gene_synonym", + "EcoGene:EG12112" + ], + [ + "gene_synonym", + "GI:16130542" + ], + [ + "gene_synonym", + "GeneID:946758" + ], + [ + "gene_synonym", + "JW2604" + ], + [ + "gene_synonym", + "NP_417113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33997" + ], + [ + "gene_synonym", + "alpA" + ], + [ + "gene_synonym", + "b2624" + ] + ], + "dna_sequence": "ATGAACAATCGATCGGCCGTTAGAATACTACGGTTACCAGCGGTTATCCAAAAAACAGGTATGGCACGGGCCACCATCTATGACTGGTTGAACCCCAAATCACCACGATACGATGCCACCTTTCCCAAAAAGCGAATGCTCGGCGTGAAATCTGTCGGATGGATTGAGGCCGAGATTGATGAGTGGTTATCACAACGCTGTAAACTTATTTGA", + "dna_sequence_length": 213, + "functions": [ + "CP4-57 prophage", + "DNA-binding transcriptional activator" + ], + "id": "CDS_2601", + "location": [ + [ + "NC_000913", + 2758644, + "+", + 213 + ] + ], + "md5": "1a9f2ef151f759074ad158f61e9f9d46", + "parent_gene": "", + "protein_md5": "b796e4dc1cb5ef4f9f8833ae45063a1d", + "protein_translation": "MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008643" + ], + [ + "gene_synonym", + "ECK2621" + ], + [ + "gene_synonym", + "EcoGene:EG13195" + ], + [ + "gene_synonym", + "GI:16130543" + ], + [ + "gene_synonym", + "GeneID:944764" + ], + [ + "gene_synonym", + "JW2605" + ], + [ + "gene_synonym", + "NP_417114.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52124" + ], + [ + "gene_synonym", + "b2625" + ], + [ + "gene_synonym", + "yfjI" + ] + ], + "dna_sequence": "ATGTTCAATGGTCGTCCTTTCCCTGTAGATGCATTTCCTAAAATTATCAGGAATGCAATTTATGAAGTGGAACAGCATACGCAGGCCCCTCAAGGTTTGATTGCTGCTTCTGCTCTTGGGGTAATTTCTCTTGCCTGTCAGAACCGGATTGATGTTTGCCGATTGAATAATCTACGTGGCCCGGTATCACTTTTCTTAATGACTCTGGCTGAATCAGGTGAACGTAAGAGTACGGTTGATAAACTGCTGATGAAGCCATTATATCAACTGGAAGAGGATTTATTTGAAAAATACACCCACGATCTTACCGCATGGAGAAATGATGAAGCAATTTTTAATATTGAAAAAAAAGCACTGATGTCAAAACTTAAATCAGATATTCGACGTAACAAAGATCACTTGGCAACAAATGAAAGACTTAAAGAACTACTTACGACAAACCCGAAAGCTCCAGTGAGATTCAAATTTTTATTTAACGATGCCACACCTGCAGCTATTAAAGCTCATCTCTGTGGGCACTGGCGATCAGTCGGCATCATGTCTGATGAAGCTGGGATCATTTTTAATGGTTACACACTTAACGAGCTGCCGTTTATCAATAAGATGTGGGATGGTTCAATATTTACGGTGGAAAGGAAAAACGAGCCCGAGAAATTAATTAGAGATGCAAGAATAACACTGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCAACGTCTTATGGAAATTGTTAATGAGAGCATCATTAAAATTAATGAAAATAATCGCATCTGCCTCCGATTCTCTGCAGAAGCAGAAAGACATTGGATCGAATTCTACAACCAGGTCGAGTCAGAAATGAGAATGATTGGCCTTCTTTATGATTTTAAGGATTATGCTTCTAAAATGGCGGAGAACATGGCGAGGCTTGCTGCCTTACTTCATTACTTCAGCGGTGATGGAGGCGATATATCTGTTACCGCAGTAAAAGCAGCAGTGGAGATAGTGGCTTGGTATATTGAAGAATACATCCGCTTGTTCTCTAAAAAAGAAGAGTTTTCTTTAGATGTTTCAGAAGCAGATGAGCTTTATTGTTGGATAAAAGATTACTGCACGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGTAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGA", + "dna_sequence_length": 1410, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2602", + "location": [ + [ + "NC_000913", + 2758985, + "+", + 1410 + ] + ], + "md5": "f4813c097ff707d81280d0f997fe92fa", + "parent_gene": "", + "protein_md5": "09afec1c2c5415e7e9ef7bb8b3359c14", + "protein_translation": "MFNGRPFPVDAFPKIIRNAIYEVEQHTQAPQGLIAASALGVISLACQNRIDVCRLNNLRGPVSLFLMTLAESGERKSTVDKLLMKPLYQLEEDLFEKYTHDLTAWRNDEAIFNIEKKALMSKLKSDIRRNKDHLATNERLKELLTTNPKAPVRFKFLFNDATPAAIKAHLCGHWRSVGIMSDEAGIIFNGYTLNELPFINKMWDGSIFTVERKNEPEKLIRDARITLSLMVQPNVFKGYIDRKGDMAKGIGFFARCLMCQPASTQGNRKISNPIFSNEHLPVFHQRLMEIVNESIIKINENNRICLRFSAEAERHWIEFYNQVESEMRMIGLLYDFKDYASKMAENMARLAALLHYFSGDGGDISVTAVKAAVEIVAWYIEEYIRLFSKKEEFSLDVSEADELYCWIKDYCTQKFSSCIKKNIILQFGPNKFRNRDKANELIRILISQNKIFISSWGKTKIINITHCVF", + "protein_translation_length": 469, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008646" + ], + [ + "gene_synonym", + "ECK2622" + ], + [ + "gene_synonym", + "EcoGene:EG13196" + ], + [ + "gene_synonym", + "GI:16130544" + ], + [ + "gene_synonym", + "GeneID:947112" + ], + [ + "gene_synonym", + "JW2607" + ], + [ + "gene_synonym", + "NP_417115.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52125" + ], + [ + "gene_synonym", + "b2626" + ], + [ + "gene_synonym", + "yfjJ" + ] + ], + "dna_sequence": "ATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCAATGATTCTACGTGTTGATCTGCATGACCCAATTGATACAGAAAATATGGATAACCCATTCTTTCAACCCAGGGTTGACTCTGGTGCTATATCTCGCTTTACCAGTGCGTTAAAAGCAAAGCTTAAACATGATAAGCATATTAAAACTCAACGGAAAGACTGGCCTGATAGTCGACATTCCACTTTACGTTACGCATGGGTCAGAGAATATACCAAAAATAGAAAGCGGCATTACCATTTGATACTGTGTTTCAATCAGGATGCTTATTATCATTTAGGTGATTACGACTTAAACCGTAACACGTTACGTACAATGATAACGACAGCTTGGTACAGTGCACTTGGCATCCCTATAGATAGCTCGGGGAAGTTAGTTAATTACCCGCCAAATGGCAAATACCTTCTCAATCGTAAAAGGGACAACTTTGAGCAGACTTATAGCGATTTGATGAATAGGGTGGATTACATGACCAAAGTAAGGACTAAAATAGTCGGTGACGGAGACCGTAATTTCGGCTGCAGTCGCGGGTAA", + "dna_sequence_length": 627, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2603", + "location": [ + [ + "NC_000913", + 2760547, + "+", + 627 + ] + ], + "md5": "aeca150559d8b71f73dff1817528a067", + "parent_gene": "", + "protein_md5": "a7eea83a92562140edcf093fa266e08e", + "protein_translation": "MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008648" + ], + [ + "gene_synonym", + "ECK2623" + ], + [ + "gene_synonym", + "EcoGene:EG13197" + ], + [ + "gene_synonym", + "GI:16130545" + ], + [ + "gene_synonym", + "GeneID:947111" + ], + [ + "gene_synonym", + "JW2608" + ], + [ + "gene_synonym", + "NP_417116.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52126" + ], + [ + "gene_synonym", + "b2627" + ], + [ + "gene_synonym", + "yfjK" + ] + ], + "dna_sequence": "ATGACAGAGATCTATGAACAGGCGAAACATAGCCTGCAGGGTGAGGACTTCTCATCGTTCAATTATCTGTTTGCGGTTAACAAGCTGTTGTCTAACCCTGTTTCGTATGACTTGGGACGGGACTTGATCGTGCGAGCTCTCGATTCGCGCGAGCGGTTTTCCGAGCACACCACAATTTTGAAAAATATGGTGAGAAAATCAGGTTTGTTCCCGTATCTCAAAAAGGAGTTCACCAGCCTGACACCGGATGACCTGAGGGTGCTTGAGCTATACCGGACGCCATTCTCGGATGGTTATGTTTTCCACTCAATGCAGTTCCACATATTCGATCTGCTCAAGTCTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGCGATTCGGTGACCGATATCAGATCATCCACCACAGTTCCCAAGTGTGCCATTCCGATCAGGCTGTTTATGTGTTAACTCAGGAGCGAGTGAACGAGCGTGACGACATCGTCGACATTGACCTCTTCGTCATTGACGAGTTTTACAAGTTGGCGTTCCGACAACTGAAAAGCGGGGACATTGATCATCAAGACGAACGAGTCATCGAGCTCAACATTGCGTTAAGCAAACTGCTTAAGGTCTCCAGGCAGTTTTACCTGACGGGACCGTTCGTTAACAGCATTCGCGGTCTCGAAAAACTTGGATATCCGCATACTTTCGTTTCTACCGACTTCAATACAGTCGCGCTAGATGTTAAGACGTTCGGCATCAAAGCGAATGACGACAAAGCCAAGCTCAAAGCGCTGGGGGAAATCGCGCACGCATGTGTCGACGCAACGATCATTTATTGCAAGTCACCAACTGTTGCGGGCCTGGTGGCGCGCGAGCTGATCAGGCTTGGGCATGGCACTCCGACTGAGAATCCCCATGTCGACTGGGTCAGCGAAGAGTTCGATGCCGACTGGGATTACACAGTCGCCCTTAGAAACGGTATTGGCTTGCATTTTGGCGCGCTACCGAGGGCACTGCAGCAATACACTGCCGACCAATTCAATGCTGGAAAACTGCGCTTTTTGCTCTGCACCTCCACGATCATTGAAGGAGTCAACACTATCGCTAAGAACGTTGTGATCTACGACAACCGCGATGGAACTCGCAGCATTGACAAATTCACCCATGGGAACATCAAAGGTCGCGCCGGGCGCATGGGCGTTCACTTCGTCGGCAAAATCTTTTGCCTGGAGGAAATCCCGGAAGACAATCTCAATCAAGAGGTGGATATTCCGCTCGGTATTCAGGGCATTGATACCCCAATCAACCTGTTAGCCAGCGTTCAACCAGACCACTTGTCCGAGTTTTCACAGGATCGCTTTGATGAGGTTTTCATAAACGACCGTGTTTCCATCGACCTTGTGAAGAAGCATTCGTACTTCCGTGTCGAGCAGTTCGAAATGCTGCAAAGCATGTTCGAGATGATGGACGATAACGAATTTTCCTCGTTAGTGTTTCACTGGACTCCCGCGACAAACTTCCTCAAGACCTTTGCAAAGATCATTGCCAGACTGGTTCCCCATACGTTCAGTCGCAATGGGGTCCCTGTTAAGCCTACGGATGTCATGATCGCAAAACTTGCCGGCTATTTAAGTGCTGAAAGTTATTCGGAATATCTGAAAAATCAGATCGATTATGCACGACAGTGGATTTCTGAAGGGGAGAAACGTACTCTTTCCATTGCCCTCAACAATGATTTGAAGCTCATAACCAATACCTTCGGCTATACCCTACCTAAGGTGCTCAGCTTGATGGAGGATGTAGTTAAACACCACGCTGTAAAGCGTGGTATACGCAGCAAAGTCGATTACACACATGTCAAATTGGCGTTCGAAAGTTTCCATCTACCACCAGGTGTCAATGCCTTAGAAGAGATTGGCATTCCCATTCAGACGTTACACCGACTGGTAGACTTGCTGGAATTTTCCGACGAGGCTGATGTGGATGAGTTGAGCCAGTATCTTCGGGATACTCAGGACATTTGGAGTAGATCGATTGGGTACGTTGATCAGATGTTTATCAGGCGCGCGCTCGGTATTAGACGACATTGA", + "dna_sequence_length": 2190, + "functions": [ + "radiation resistance protein", + "DEAD/H helicase-like protein", + "CP4-57 putative defective prophage" + ], + "id": "CDS_2604", + "location": [ + [ + "NC_000913", + 2763540, + "-", + 2190 + ] + ], + "md5": "0a3ea2b54462b17838c5d009cf223e5d", + "parent_gene": "", + "protein_md5": "c273128976da204447c0a7fcbcff146d", + "protein_translation": "MTEIYEQAKHSLQGEDFSSFNYLFAVNKLLSNPVSYDLGRDLIVRALDSRERFSEHTTILKNMVRKSGLFPYLKKEFTSLTPDDLRVLELYRTPFSDGYVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLLGMGTLKRLVLVVPTVALADETRRRLQERFGDRYQIIHHSSQVCHSDQAVYVLTQERVNERDDIVDIDLFVIDEFYKLAFRQLKSGDIDHQDERVIELNIALSKLLKVSRQFYLTGPFVNSIRGLEKLGYPHTFVSTDFNTVALDVKTFGIKANDDKAKLKALGEIAHACVDATIIYCKSPTVAGLVARELIRLGHGTPTENPHVDWVSEEFDADWDYTVALRNGIGLHFGALPRALQQYTADQFNAGKLRFLLCTSTIIEGVNTIAKNVVIYDNRDGTRSIDKFTHGNIKGRAGRMGVHFVGKIFCLEEIPEDNLNQEVDIPLGIQGIDTPINLLASVQPDHLSEFSQDRFDEVFINDRVSIDLVKKHSYFRVEQFEMLQSMFEMMDDNEFSSLVFHWTPATNFLKTFAKIIARLVPHTFSRNGVPVKPTDVMIAKLAGYLSAESYSEYLKNQIDYARQWISEGEKRTLSIALNNDLKLITNTFGYTLPKVLSLMEDVVKHHAVKRGIRSKVDYTHVKLAFESFHLPPGVNALEEIGIPIQTLHRLVDLLEFSDEADVDELSQYLRDTQDIWSRSIGYVDQMFIRRALGIRRH", + "protein_translation_length": 729, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008650" + ], + [ + "gene_synonym", + "ECK2624" + ], + [ + "gene_synonym", + "EcoGene:EG13198" + ], + [ + "gene_synonym", + "GI:16130546" + ], + [ + "gene_synonym", + "GeneID:947110" + ], + [ + "gene_synonym", + "JW2609" + ], + [ + "gene_synonym", + "NP_417117.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52127" + ], + [ + "gene_synonym", + "b2628" + ], + [ + "gene_synonym", + "yfjL" + ] + ], + "dna_sequence": "ATGGAGTCGAACGATTCAGGCGGAGTAGCCGCCAAGCACGGTTTCTTATTTCAGGACTGCGTAGCCGCTTACCATGTCACCCGAATGCTTCGTGACAAGACTATCCGCAGTGTGCGCTGCGAGGTCACAGACGATATCGACATTGTATCTGATGGATACATCGACTTCGTTCAGGTAAAAAGCACCGGCAAAACACGTTGGAACATTTCGGACATCGTTCAGAATTCAAAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTTGACGATCAGCCCAAACGCCCGACTAGATAAGCCAGGTCGACAGGAACTCATCGATGACCTCAACAAACGCACAGACAATTTTTTAACAGACTCAGGTATAAGCGTTTCAGATTGGATCGATGCGGCTACATGGGAAGTGTTTTCATCCCTGCGCGAACTGGAACTTCTAGGGATCAAGAACATACGGCTGGCCTCCCAAGATCTACATGGGGTCATTCTCAGTTCCGAAACCGTCGCCGAAGACATTTGGTGCCGCATCCTTGATACTGTGACGCGCAAGGGCGAGCATTCTCGACGCATTCACAGTGCTGATGACAAGTCCTACTTACGACCAGACCTACTTGAGTGGTTCAAGCAGCGTGTCGAAGATGACCAATCTCGGTCAGGCCGCAAAATCTACGTCAAACGGGACTTACCCCACATCCTTACGCCATTTAGAGCGCCTATGGCTTCGGTCTGCGCTAAGCGTAAAGGCCAGGTTCTACATCAGCAGTACTCACTTAAGAAATACCGCTACAAGCACATCGCGGATAACGTCTGTCAATGGTTGGATGAGGTTTTTCTCCGACCAAAAGAAATGTCTGATATTCATAAACTGACATTCATTGAAAAGCGAGAACGACTAAAGAATTCCGTCTTCAAATCGCTCCATGACGTCAGCGAATTTTTGGGTCGAGTGCTGTTGCACGCAACGATCCGGCAGCACCACGAAAGCCAGCCTATTCCTTGCATGCTATACGTGGAAAAAGCAGGGGCCGAAAAAATTCTTGAAAACGTGCATATCGTTCGCCGCGATCCAGAAGGTGATCAGCTTTGGATTGGCTTCAGCGAGTTGGTGACTGATATTAACATTGCCGTCAGATTGCCGGAGATACGGGATCAGTTGTACGAGGACATTTCGGATTGCATCGATACCGCGCGCAAAAAAATCCTCGACATTAAAGACGATAACTACCTGCTTCGCCACGACATTGACGAAATTCTTGATGGCAGCCAACCTTTCGATGCTCACCTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGAGTCTTGAGCGGTTAACCCAATTAGTTGATGAGAAGGTGAGAGAGGTCGTATGA", + "dna_sequence_length": 1617, + "functions": [ + "CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein" + ], + "id": "CDS_2605", + "location": [ + [ + "NC_000913", + 2765153, + "-", + 1617 + ] + ], + "md5": "33fd5dd5f7bb09e194843aa65e0550e4", + "parent_gene": "", + "protein_md5": "12b7a0dd3b0728c7c326c65a0c710d29", + "protein_translation": "MESNDSGGVAAKHGFLFQDCVAAYHVTRMLRDKTIRSVRCEVTDDIDIVSDGYIDFVQVKSTGKTRWNISDIVQNSKGADKKTIPCSSILHKSMQCESDLSLGRRYSIVTEEKVNKTLEYLTISPNARLDKPGRQELIDDLNKRTDNFLTDSGISVSDWIDAATWEVFSSLRELELLGIKNIRLASQDLHGVILSSETVAEDIWCRILDTVTRKGEHSRRIHSADDKSYLRPDLLEWFKQRVEDDQSRSGRKIYVKRDLPHILTPFRAPMASVCAKRKGQVLHQQYSLKKYRYKHIADNVCQWLDEVFLRPKEMSDIHKLTFIEKRERLKNSVFKSLHDVSEFLGRVLLHATIRQHHESQPIPCMLYVEKAGAEKILENVHIVRRDPEGDQLWIGFSELVTDINIAVRLPEIRDQLYEDISDCIDTARKKILDIKDDNYLLRHDIDEILDGSQPFDAHLDRFTFVLFVGYDSNLLTEPETPGFEDDLEKETAVLFEKFAADLIEDSPFANLCIHVFIYPAPSLERLTQLVDEKVREVV", + "protein_translation_length": 538, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008654" + ], + [ + "gene_synonym", + "ECK2625" + ], + [ + "gene_synonym", + "EcoGene:EG13199" + ], + [ + "gene_synonym", + "GI:16130547" + ], + [ + "gene_synonym", + "GeneID:947108" + ], + [ + "gene_synonym", + "JW2610" + ], + [ + "gene_synonym", + "NP_417118.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52128" + ], + [ + "gene_synonym", + "b2629" + ], + [ + "gene_synonym", + "yfjM" + ] + ], + "dna_sequence": "ATGGGGGATGATGTCCATCGTTTCGGTAACCTCTTCCTGATCTCACCAAGCAGCAACTCGATACTTAGTAATTATTCGCCAGCAGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAA", + "dna_sequence_length": 264, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2606", + "location": [ + [ + "NC_000913", + 2765776, + "-", + 264 + ] + ], + "md5": "9d0fd1646792b77f23f05d513e9f8401", + "parent_gene": "", + "protein_md5": "7039d5881a1f983ca24a595e677a9ca7", + "protein_translation": "MGDDVHRFGNLFLISPSSNSILSNYSPADKKKFYVETERAESPKQAIMMSYKEWGPDGQGINNIESHEHAMLTLLKEHRDMTLPTRK", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008659" + ], + [ + "gene_synonym", + "ECK2626" + ], + [ + "gene_synonym", + "EcoGene:EG13200" + ], + [ + "gene_synonym", + "GI:16130548" + ], + [ + "gene_synonym", + "GeneID:947107" + ], + [ + "gene_synonym", + "JW2611" + ], + [ + "gene_synonym", + "NP_417119.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52129" + ], + [ + "gene_synonym", + "b2630" + ], + [ + "gene_synonym", + "rnlA" + ], + [ + "gene_synonym", + "std" + ], + [ + "gene_synonym", + "yfjN" + ] + ], + "dna_sequence": "ATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCAAATATCGAGACTGAATCCAGACAATTCATTGAAAATAAAAACTATTCAATCCAATCAATTGGTCCTATGCCAGGGTCAAGGGCTGGGCTTCGGGTCGTATTTACCAGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTCTACCTGTACTTGAGCTATCAGCAGATGAATCGCATATAGAGTTCAGAGAACACTCTCGTAACGCTCATACCGTAGTGTGGAAAATTATTTCCACCAGCTATCAGGACGAATTGACTGTGAGCCTGCATATCACAACAGGTAAGCTCCAGATTCAGGGCCGACCGCTGTCATGTTACAGAGTTTTCACGTTTAACTTGGCAGCCCTGCTTGATTTACAGGGTTTGGAGAAAGTGCTAATCCGCCAGGAGGATGGTAAAGCTAATATTGTTCAACAGGAGGTTGCCCGCACTTACTTGCAGACTGTAATGGCCGATGCTTACCCGCATCTCCACGTGACTGCCGAAAAATTGCTCGTTTCAGGGCTATGTGTTAAACTCGCCGCCCCTGATTTGCCTGACTACTGTATGTTACTTTATCCTGAACTACGCACCATTGAAGGTGTCTTAAAAAGTAAGATGAGTGGGTTAGGCATGCCAGTACAGCAGCCGGCAGGTTTTGGAACTTACTTTGATAAACCTGCTGCTCATTACATTCTGAAACCGCAATTTGCAGCTACTCTTAGACCGGAACAGATTAACATCATCAGCACAGCCTATACTTTTTTTAATGTGGAACGTCATTCTCTGTTCCACATGGAAACTGTGGTCGATGCCAGCCGTATGATTTCTGATATGGCCCGGTTGATGGGTAAAGCCACTAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGA", + "dna_sequence_length": 1074, + "functions": [ + "CP4-57 prophage", + "RNase LS" + ], + "id": "CDS_2607", + "location": [ + [ + "NC_000913", + 2765918, + "+", + 1074 + ] + ], + "md5": "c5323194990e95c80a0315e84e65738b", + "parent_gene": "", + "protein_md5": "13f92cde132463e80023a16e505d0bf8", + "protein_translation": "MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNMVLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGKLQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADAYPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPAGFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMISDMARLMGKATRAWGIIKDLYIV", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008665" + ], + [ + "gene_synonym", + "ECK2627" + ], + [ + "gene_synonym", + "EcoGene:EG13201" + ], + [ + "gene_synonym", + "GI:90111470" + ], + [ + "gene_synonym", + "GeneID:947113" + ], + [ + "gene_synonym", + "JW5418" + ], + [ + "gene_synonym", + "NP_417120.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52130" + ], + [ + "gene_synonym", + "b2631" + ], + [ + "gene_synonym", + "rnlB" + ], + [ + "gene_synonym", + "yfjO" + ] + ], + "dna_sequence": "TTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCAAAATTATTGATGAGCAGGACGTTCCGACACATATCCTGAGCAAACTGACTTTTACTTTACGTAATCATCCTGAGTACCTAGAAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGA", + "dna_sequence_length": 372, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2608", + "location": [ + [ + "NC_000913", + 2766984, + "+", + 372 + ] + ], + "md5": "8f273558df5eb868f1560e6f4dd2936d", + "parent_gene": "", + "protein_md5": "0c066ac7ccd9f2a815dddc2a9e736501", + "protein_translation": "MFEITGINVSGALKAVVMATGFENPLSSVNEIETKLSALLGSETTGEILFDLLCANGPEWNRFVTLEMKYGRIMLDTAKIIDEQDVPTHILSKLTFTLRNHPEYLEASVLSPDDVRQVLSMDF", + "protein_translation_length": 123, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008669" + ], + [ + "gene_synonym", + "ECK2628" + ], + [ + "gene_synonym", + "EcoGene:EG13202" + ], + [ + "gene_synonym", + "GI:49176249" + ], + [ + "gene_synonym", + "GeneID:947124" + ], + [ + "gene_synonym", + "JW5419" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52131" + ], + [ + "gene_synonym", + "YP_026173.1" + ], + [ + "gene_synonym", + "b2632" + ], + [ + "gene_synonym", + "yfjP" + ] + ], + "dna_sequence": "ATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCGCTATGGGTATCTGAACGTATATTGCAGCAGATAAATCAGTTAACCCACTACGAGCCAGTGATCGGCATCATGGGTAAAACTGGGGCGGGAAAGAGTAGCCTTTGCAATGCCCTGTTTGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATACCGGCATAAGATGCTGTTTGTTATCAGCCAGTCAGACAAAGCTGAACCCACCAGCGGTGGAAATATCCTTTCCACAGAGCAGAAACAAAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTATTCCAGCCCGTGCATCCGGTGTGTGCCGTGTCGGTTCGCCTGCAGTGGGGACTAAGGGTGATGGCAGAGCGGATGATTAAGTGTCTGCCGCGTGAGGCCAGCAGCCCGGTAGTAGCGCTACTGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGA", + "dna_sequence_length": 864, + "functions": [ + "CP4-57 prophage", + "50S ribosome-binding GTPase family protein" + ], + "id": "CDS_2609", + "location": [ + [ + "NC_000913", + 2767710, + "+", + 864 + ] + ], + "md5": "3d2ba462dd023b12dcb17887a6762f54", + "parent_gene": "", + "protein_md5": "86ef7344ad319eaa7a2d5bd86aec3683", + "protein_translation": "MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008673" + ], + [ + "gene_synonym", + "ECK2629" + ], + [ + "gene_synonym", + "EcoGene:EG13203" + ], + [ + "gene_synonym", + "GI:16130551" + ], + [ + "gene_synonym", + "GeneID:947127" + ], + [ + "gene_synonym", + "JW2614" + ], + [ + "gene_synonym", + "NP_417122.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52132" + ], + [ + "gene_synonym", + "b2633" + ], + [ + "gene_synonym", + "yfjQ" + ] + ], + "dna_sequence": "ATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAG", + "dna_sequence_length": 822, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2610", + "location": [ + [ + "NC_000913", + 2768665, + "+", + 822 + ] + ], + "md5": "ffcf1d6e66a8a4de01df0657047bb3d7", + "parent_gene": "", + "protein_md5": "9214e8adc4840f03ece74a2dda668917", + "protein_translation": "MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPRRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGMFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFERVEEKRDAMQSLLLPPPVQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKGGRTHTRAVRGIDGDVKLNRALWVMAETLLTQLQ", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008676" + ], + [ + "gene_synonym", + "ECK2630" + ], + [ + "gene_synonym", + "EcoGene:EG13204" + ], + [ + "gene_synonym", + "GI:16130552" + ], + [ + "gene_synonym", + "GeneID:947309" + ], + [ + "gene_synonym", + "JW2615" + ], + [ + "gene_synonym", + "NP_417123.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52133" + ], + [ + "gene_synonym", + "b2634" + ], + [ + "gene_synonym", + "yfjR" + ] + ], + "dna_sequence": "ATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGAAACGTTGAGCGTGCGCAAACTGGCGGCTGAGTTTGGCGTGTCAGTGCGCACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGTTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAG", + "dna_sequence_length": 702, + "functions": [ + "CP4-57 prophage", + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2611", + "location": [ + [ + "NC_000913", + 2769703, + "+", + 702 + ] + ], + "md5": "20bffa5ca42ff54a563e5ba39872ae3a", + "parent_gene": "", + "protein_md5": "060d14483637d9c17c9d3d3b60e7f218", + "protein_translation": "MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQSGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLVNALLMCDESPCVIAPANPVPSPSGALSFWRLIQAITGRRRVTLIAEGRRCERLAPCRLLIHQQTWYLVAEHEGHIAVFTLDEIHLIQPLQETFRRNDSLCRLVEDPVFIQALPHFRFIQHSLLTFVPADSPPE", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008678" + ], + [ + "gene_synonym", + "ECK2631" + ], + [ + "gene_synonym", + "EcoGene:EG14379" + ], + [ + "gene_synonym", + "GI:90111471" + ], + [ + "gene_synonym", + "GeneID:2847710" + ], + [ + "gene_synonym", + "JW5888" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52134" + ], + [ + "gene_synonym", + "YP_026174.2" + ], + [ + "gene_synonym", + "b2635" + ], + [ + "gene_synonym", + "ypjK" + ] + ], + "dna_sequence": "GTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAACCGTTGCCGCACTACTGACGGGAGGTGGTGCAGCCGGTGCTGCCAGTGTCGCGCTGACGCCGTTCGTCGGCGTGCCGGTGGGTATTTTTGTGGGAATTTATGTCTTTGCCAAAGTGGTTCGTCTGATTTCAGGGAAAAAATAA", + "dna_sequence_length": 237, + "functions": [ + "CP4-57 prophage", + "putative inner membrane protein" + ], + "id": "CDS_2612", + "location": [ + [ + "NC_000913", + 2770445, + "+", + 237 + ] + ], + "md5": "c2829ce4448c27cb7cec10d6981b146d", + "parent_gene": "", + "protein_md5": "c42801ba3b0c9f03522703caf0787af3", + "protein_translation": "MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008680" + ], + [ + "gene_synonym", + "ECK2632" + ], + [ + "gene_synonym", + "EcoGene:EG13205" + ], + [ + "gene_synonym", + "GI:90111472" + ], + [ + "gene_synonym", + "GeneID:945668" + ], + [ + "gene_synonym", + "JW5921" + ], + [ + "gene_synonym", + "NP_417124.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:O52982" + ], + [ + "gene_synonym", + "b2636" + ], + [ + "gene_synonym", + "yfjS" + ] + ], + "dna_sequence": "ATGAAACGTAAAACACTACCTCTGCTGGCGCTGGTTGCCACCTCTCTGTTTCTGAGCGCCTGCGATGACAGGAGTGATGACCTCAAAGCTATCAGTAAATTTAAGGACCTCACGCCCCCGCGCTTCAGCGATGTGGTCAGCCGTCAGGATGATGTCAGCGAAGAATGGTCACAGGTTGGCTTCTCATCCGGTCTCACCCTGCAGGTCTTACGTACCCGTGAGTCGCCCGATGGTTGCGAGGGTGGCAGTTACTACTATCTGGTAGATATGGAGGAGAAAACCGTCCAGCCGCTGATGAATGCGCTTTGTATTGCCGACAATATCAAACTGGAATACCACGAAGTTACGGACCCGTATACGAAAGAAAAATACTTCGAATATTCCCATGACGGCAAACTGATGGGACGGCTGCTGATACCGTCAAACCCTGATAACCGGGAATAA", + "dna_sequence_length": 444, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2613", + "location": [ + [ + "NC_000913", + 2770681, + "+", + 444 + ] + ], + "md5": "1e5395f9444ccac844d02c7bbce09c0e", + "parent_gene": "", + "protein_md5": "39b9328fc6405ef49c5b675c8ea853bc", + "protein_translation": "MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008683" + ], + [ + "gene_synonym", + "ECK2633" + ], + [ + "gene_synonym", + "EcoGene:EG13206" + ], + [ + "gene_synonym", + "GI:16130554" + ], + [ + "gene_synonym", + "GeneID:947616" + ], + [ + "gene_synonym", + "JW2618" + ], + [ + "gene_synonym", + "NP_417125.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52135" + ], + [ + "gene_synonym", + "b2637" + ], + [ + "gene_synonym", + "yfjT" + ] + ], + "dna_sequence": "ATGAAAATACGTTCACTAAGCCGGTTTGTACTGGCAAGTACAATGTTCGCCAGCTTTACAGCCTCTGCGGTCCCCGGACTCTGGCAACAGGGGTACGGTCAGGGCAATGCGGAATACAGTGTGACGGATGCCAGCGGAAAGATGTTTACCATCAACTGCACGGGAAATCCGGACCAGAACGGTATTTACCAGCACTCGGTTTTTCTGATCCTCGCCGGGGATAAAACGGTCAGCTCGCATGATGACAGTACCGGCATCACAGTGGTGATGGACCATAAGCAATATGCCATTCCCTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGA", + "dna_sequence_length": 468, + "functions": [ + "CP4-57 prophage", + "putative periplasmic protein" + ], + "id": "CDS_2614", + "location": [ + [ + "NC_000913", + 2771148, + "+", + 468 + ] + ], + "md5": "6ef91c980531d4cc7685882ebe40e6a4", + "parent_gene": "", + "protein_md5": "ab0cc654f6c4c365ecbf7fdecdcfa468", + "protein_translation": "MKIRSLSRFVLASTMFASFTASAVPGLWQQGYGQGNAEYSVTDASGKMFTINCTGNPDQNGIYQHSVFLILAGDKTVSSHDDSTGITVVMDHKQYAIPSTLGWRNGDNAWFSFIMDIRKARQFDVYVNDQKVGSFNPDVRNAQKVLPTLADCTND", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008685" + ], + [ + "gene_synonym", + "ECK2634" + ], + [ + "gene_synonym", + "EcoGene:EG13207" + ], + [ + "gene_synonym", + "GeneID:945062" + ], + [ + "gene_synonym", + "JW2619" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF86" + ], + [ + "gene_synonym", + "b2638" + ], + [ + "gene_synonym", + "yfjU" + ] + ], + "dna_sequence": "ATGAGCAACATTACCATCTATCACAACCCGGCCTGTGGCACCTCACGCAACACGCTGGAGATGCTTCATAACAACGGCAACGAACCGACAATAATTAATTATCTCGATATGCCACCGACCCGTGATGAACTGATTAAACTTATTTCAGATATC", + "dna_sequence_length": 153, + "id": "CDS_2615", + "location": [ + [ + "NC_000913", + 2772154, + "-", + 153 + ] + ], + "md5": "7b5fee1440a7928fc9fe598f20766337", + "parent_gene": "", + "protein_md5": "f778cf515a907305e363e3fb6e879862", + "protein_translation": "MSNITIYHNPACGTSRNTLEMLHNNGNEPTIINYLDMPPTRDELIKLISDI", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008687" + ], + [ + "gene_synonym", + "ASAP:ABE-0008690" + ], + [ + "gene_synonym", + "ASAP:ABE-0008692" + ], + [ + "gene_synonym", + "ECK2635" + ], + [ + "gene_synonym", + "EcoGene:EG13208" + ], + [ + "gene_synonym", + "GeneID:947563" + ], + [ + "gene_synonym", + "JW5922" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52137" + ], + [ + "gene_synonym", + "b2641" + ], + [ + "gene_synonym", + "yfjV" + ], + [ + "gene_synonym", + "ypjL" + ], + [ + "gene_synonym", + "ypjM" + ] + ], + "dna_sequence": "AGAGCGCTGTTCACCTGGAAAGTCTTGCTCGGTGCCGCTGTTGATGCGTTGTTTGCCAATGACGGCGCCGCGCTGATCCTGACGCCGATTGTGATTGCGATGCTGATCGCACTGGGTTTCAGCCAGGGCACGACACTGGCCTTTGTCATGGCTGCAGGATTTATTGCAGATACGGCCAGCCTGCCGCTCATTGTTTCTAACCTGGTGAATATCGTCTCGGCGGACTTCTTCGGTCTGAGCTTTGCGCAGTACGCCTCCGTTATGATCTCCGTGGATGCGGCAGCGATTGCGGCCACGCTGATTATGCTGTATCTCTTCTTTCGCAGAGTTATTCCGGCAACGTATTAAGTTTCGCTGCTGAAGACGCCTGCCAGTGCGATCAAGGATCTGGCAACCTTCAGGGCGGGCTGGATTGTCCTGTTATTGCTGCTTGTCGGTTTCTTCTTTCTGGAGCCGCAGGGAATCCTGGTCAGTGCGATAGCGGCCGCTGGCGCAGCAGTGCTGTTTGTGGTGGCGAAAAGAGGTCATTCGATCAACACCGGAAAAGTCCTGCGCGGTGCGCCATGGCAGATCGTTATTTTCTCACTGGGCATGTACATCGTGGTCTATGGCCTGCGCAATGCAGGGTTCACGGAGTACCTGTCTGGCGTGCTGAATCTGCTGGCAGACAAGGGGTTATGGGCAGCGACGTTCGGCACCGGCTTCTTGACGGCATTTCTCTCATCAGTGATGAACAATATGCCGACGGTGCTGATTGGTGCGCTGTCGATTGACGGGAGTACGGCGACTGGCGTCGTCAAAGAGGCAATGATTTATGCCAATGTGATTGGCTGTGATTTAGGCCCGAAAATCACCCCGATTGGCAGTCTGGCAACTCTGCTGTGGCTGCATGTGCTTGCCCAGAAAAATATGACAATCACTTGGGGATATTACTTCCGTACCGGCATTGTCATGACTGTGCCGGTGCTGTTTGTCACTCTGGCCGCGCTGGCGTGGCGGCTCTCTGTCACTTTGTAA", + "dna_sequence_length": 1017, + "id": "CDS_2616", + "location": [ + [ + "NC_000913", + 2773182, + "-", + 117 + ], + [ + "NC_000913", + 2773066, + "-", + 900 + ] + ], + "md5": "5258a34fe90c679f4f02a0d19b451b3d", + "parent_gene": "", + "protein_md5": "ca79535dba72c5b22431d9c9c3da23ad", + "protein_translation": "RALFTWKVLLGAAVDALFANDGAALILTPIVIAMLIALGFSQGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLSFAQYASVMISVDAAAIAATLIMLYLFFRRVIPATY", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008699" + ], + [ + "gene_synonym", + "ECK2638" + ], + [ + "gene_synonym", + "EcoGene:EG13209" + ], + [ + "gene_synonym", + "GI:16130557" + ], + [ + "gene_synonym", + "GeneID:947128" + ], + [ + "gene_synonym", + "JW2623" + ], + [ + "gene_synonym", + "NP_417129.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52138" + ], + [ + "gene_synonym", + "b2642" + ], + [ + "gene_synonym", + "yfjW" + ] + ], + "dna_sequence": "ATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGAATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTTTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTTAATAAGATAAAACATATTCCAATGATTTTATCGGCAATGATTCCATTAGTTTCCGCAATAATAATAGCCATACTCATAACCGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGAATGTAAAAAAGCTAGAAATCACACAGAAACTTCCAATGATGGGGTTCATACAAGGTGAATCCGCTGATGTGATGCCTAAAGCAGCATCCAGGTTAAGTTTGAGCAAGCAAGATGATAAATTTATGCTAGCCTCAAGTGTTACTGACTCTCAAATAAAATTTAAATCAAACAATGCACAATTGATGGTTGCTTTCGCATTTATGCCAATAACAACGAATGGTATTTTACATGATTATACATACGATATAATAATAAATGATAAAAAATATAAAATTGAAAATCATGTTGCACCTCTATCTAGGCTTGATAAAAATAAGAAGATGAAGTGTGAATACCAGCAAATATCGGATTTAACAAATACGTATAACATTAATGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATCTCCCAGTTTAGTATCAACGGGAAACATTTGTCGTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGCAAAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCGTAAAATAACTTATTTGCAATCTAAGCTAGAAATTTTTGGTTCTTCTATTATGGATATATTAAAGTATATATTTGGTTTAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAA", + "dna_sequence_length": 1704, + "functions": [ + "CP4-57 prophage", + "putative inner membrane protein" + ], + "id": "CDS_2617", + "location": [ + [ + "NC_000913", + 2773318, + "+", + 1704 + ] + ], + "md5": "60a486f8b47583c9d6f1b6cef5b07739", + "parent_gene": "", + "protein_md5": "d36cedb909e048bdf2cada2a2f31d3bf", + "protein_translation": "MAFVSEREIVRKIFSKKIDFTILAFFYISSIFFLLCSGVLFQYFTAAFTKGNCYECSMKLDYIKQFYFSLETAWYLISAVAVFIASVFIQHRIKAYLTLLAITWIVLTITDVALIHALDNIAMNNILLNILYNLFGAILLSLFMCLSNSLLFHLNKIKHIPMILSAMIPLVSAIIIAILITAVIYLLFARQAVEIEMDISEGSDIAYVGVKDNEESFGFLNDKKTDTPTYLDVIKNGSLIYNDTQGLSGADIYIVSGCYALPDLLRNVPLDAKKSFLNVKKLEITQKLPMMGFIQGESADVMPKAASRLSLSKQDDKFMLASSVTDSQIKFKSNNAQLMVAFAFMPITTNGILHDYTYDIIINDKKYKIENHVAPLSRLDKNKKMKCEYQQISDLTNTYNINANYLTGFLLVLKPDDIINYNNSPSVLLKTDFAFYKKTYQKLDKIYDDISNGKLSSLRATGISQFSINGKHLSLRPESEIIISEGSLYGLVNKSKKIKIYGTADLVFVDNKIMNLRKITYLQSKLEIFGSSIMDILKYIFGLGLLAISIKFIHSYFKNDVNENLFL", + "protein_translation_length": 567, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4438" + ], + [ + "gene_synonym", + "EcoGene:EG13309" + ], + [ + "gene_synonym", + "GeneID:5625570" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58095" + ], + [ + "gene_synonym", + "b4644" + ], + [ + "gene_synonym", + "ypjI" + ] + ], + "dna_sequence": "ATGAGCAACTCTGAAGGTTGGTAGTCATTTTAGCAAACGCTTTCTGGTCTGCCGCAGTGGGCATCGGCTGATTGCGTAGCAGGGCCACTGGTATCTGCCGGTATCACCGACATTAACATTGAAGACGACCAGGGCATTCACGTCCGCCTGATAGTTCGTGATGCCGAAGGTCGGATGGTTTGGCGGGCATGGAACTTTGAACCGGACGCCGGTGAAGGTTTTAACCGCTATATCCACAGGTCAGGCATCCGCACCGACACCTTCCCCCGCTGA", + "dna_sequence_length": 273, + "id": "CDS_2618", + "location": [ + [ + "NC_000913", + 2775545, + "+", + 180 + ], + [ + "NC_000913", + 2775724, + "+", + 93 + ] + ], + "md5": "42a16acc8cc24cd030669e41dad96c0a", + "parent_gene": "", + "protein_md5": "fd0137d7be29a3924411e543cfeae2d7", + "protein_translation": "MSNSEGW", + "protein_translation_length": 7, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008704" + ], + [ + "gene_synonym", + "ECK2639" + ], + [ + "gene_synonym", + "EcoGene:EG13210" + ], + [ + "gene_synonym", + "GI:16130558" + ], + [ + "gene_synonym", + "GeneID:947126" + ], + [ + "gene_synonym", + "JW2624" + ], + [ + "gene_synonym", + "NP_417130.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52139" + ], + [ + "gene_synonym", + "b2643" + ], + [ + "gene_synonym", + "yfjX" + ] + ], + "dna_sequence": "ATGACAACACAGACACAGTACGACCTCGTACCCGCTAACGGATCCGAATTTGAGTTGAGCGTAACGCAGGTACCCGATGAACAGCATATCCGCTTCTGGCCGCAGCACTTTGGCACCATCCCGCAGTGGATAACGCTGGAACCGCGCATTTTCGCCTGGATGGACCGCTTCTGTGATGAGTACTGCGGGGGTATCTGGTCCTTTTACACGCTCAGCAATGGCGGAGCGTTTATGGCTCCTGATGCTGACGGTGACGATAAATGGCATTTGCTCAACGGCATGAATGGCAATGGTGCGGAAATGAGCGCGGAAGCCGCAGGTATCGCTGTCTGCCTGATTGAATATAGCCATCACGCCTGCCTCACCGAATGCGATGCCATGACGGAGCACTATTACCGCCTGCGGGATTACGCTCTGCAGCACCCTGAATCCAGCGCCATTATGCGCATTATTGATTAA", + "dna_sequence_length": 459, + "functions": [ + "CP4-57 prophage", + "putative antirestriction protein" + ], + "id": "CDS_2619", + "location": [ + [ + "NC_000913", + 2775919, + "+", + 459 + ] + ], + "md5": "d061d7230c9e63a80097868587008869", + "parent_gene": "", + "protein_md5": "f47fda0e885e4b93e51b65fc7dd1f6cb", + "protein_translation": "MTTQTQYDLVPANGSEFELSVTQVPDEQHIRFWPQHFGTIPQWITLEPRIFAWMDRFCDEYCGGIWSFYTLSNGGAFMAPDADGDDKWHLLNGMNGNGAEMSAEAAGIAVCLIEYSHHACLTECDAMTEHYYRLRDYALQHPESSAIMRIID", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008706" + ], + [ + "gene_synonym", + "ECK2640" + ], + [ + "gene_synonym", + "EcoGene:EG13211" + ], + [ + "gene_synonym", + "GI:16130559" + ], + [ + "gene_synonym", + "GeneID:947125" + ], + [ + "gene_synonym", + "JW2625" + ], + [ + "gene_synonym", + "NP_417131.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52140" + ], + [ + "gene_synonym", + "b2644" + ], + [ + "gene_synonym", + "yfjY" + ] + ], + "dna_sequence": "ATGATGGAACAGTCACTCATCCCACAGACACCGGTACTTCCACTGACCGCACAACGCACGGTAAAACGCGCCTTAACGCTGCTTGACCGACACCTGCGCGAAACAGGCGTGGCATTCACCTCCACTCAGGCTGCTCGTGACTGGCTGAAGCTGAAAATGGCGGGGCTGGAGCGTGAAGAATTTATGATGCTGTATCTGAACCAGCAGAACCAGTTGATTGCCCACGAAACCCTGTTTGCCGGTTCTATTAGCAGTACCGAGGTACATCCCCGTGAGGTGGTCAAACGCGCCCTGTATTTCAATGCAGCAGCAGTGATACTGGCGCATAACCACCCCTCCGGCGACACTACTCCCAGCCAGGCAGATAAGACTATAACGCAGCGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGA", + "dna_sequence_length": 483, + "functions": [ + "CP4-57 prophage", + "putative DNA repair protein" + ], + "id": "CDS_2620", + "location": [ + [ + "NC_000913", + 2776386, + "+", + 483 + ] + ], + "md5": "d2503d1304045b360a3be4102288c943", + "parent_gene": "", + "protein_md5": "ed6a6cc80b592178b5058c4a1a3a4bca", + "protein_translation": "MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285069" + ], + [ + "gene_synonym", + "ECK2641" + ], + [ + "gene_synonym", + "EcoGene:EG14330" + ], + [ + "gene_synonym", + "GI:94541123" + ], + [ + "gene_synonym", + "GeneID:1450287" + ], + [ + "gene_synonym", + "JW5421" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58033" + ], + [ + "gene_synonym", + "YP_588466.1" + ], + [ + "gene_synonym", + "b4548" + ], + [ + "gene_synonym", + "ypjJ" + ] + ], + "dna_sequence": "ATGAGAATTATCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGA", + "dna_sequence_length": 201, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2621", + "location": [ + [ + "NC_000913", + 2776877, + "+", + 201 + ] + ], + "md5": "e7fc292e07d3687fb970037506103b69", + "parent_gene": "", + "protein_md5": "a8560f0c0cf40e171a329a999299e967", + "protein_translation": "MRIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVPDITGVLAVYAERRRTAADRMLD", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008709" + ], + [ + "gene_synonym", + "ECK2642" + ], + [ + "gene_synonym", + "EcoGene:EG13212" + ], + [ + "gene_synonym", + "GI:16130560" + ], + [ + "gene_synonym", + "GeneID:947123" + ], + [ + "gene_synonym", + "JW2626" + ], + [ + "gene_synonym", + "NP_417132.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52141" + ], + [ + "gene_synonym", + "b2645" + ], + [ + "gene_synonym", + "yfjZ" + ] + ], + "dna_sequence": "ATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGTCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATACTCTTGGTAGTTGCGGCTACGTATACATCGCTGTTTACCCCACTCAACGCTAA", + "dna_sequence_length": 318, + "functions": [ + "CP4-57 prophage", + "antitoxin of the YpjF-YfjZ toxin-antitoxin system" + ], + "id": "CDS_2622", + "location": [ + [ + "NC_000913", + 2777115, + "+", + 318 + ] + ], + "md5": "eb917d531a31f2d42105ca54096de35a", + "parent_gene": "", + "protein_md5": "c208ea9931af18c11a210fd6250ba6c9", + "protein_translation": "MSNTTWGLQRDITPRLGARLVQEGNQLHYLADRASITGKFSDAECPKLDVVFPHFISQIESMLTTGELNPRHAQCVTLYHNGFTCEADTLGSCGYVYIAVYPTQR", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008711" + ], + [ + "gene_synonym", + "ECK2643" + ], + [ + "gene_synonym", + "EcoGene:EG14284" + ], + [ + "gene_synonym", + "GI:16130561" + ], + [ + "gene_synonym", + "GeneID:947131" + ], + [ + "gene_synonym", + "JW2627" + ], + [ + "gene_synonym", + "NP_417133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46953" + ], + [ + "gene_synonym", + "b2646" + ], + [ + "gene_synonym", + "ypjF" + ] + ], + "dna_sequence": "ATGAACACTCTACCTGCTACAATTTCGCAGGCGGCGAAGCCCTGCCTGTCGCCAGTGGCTGTCTGGCAAATGCTACTGACACGCCTGCTGGAACAACACTATGGCCTGACACTGAACGACACGCCGTTCAGTGATGAAACTGTTATTAAGGAACATATCGATGCTGGTATCACTCTGGCCGATGCAGTCAATTTTCTGGTGGAAAAGTACGAACTGGTACGTATCGATCACAGAGGATTTTCGTGGCAACAACAGTCTCCATATATTTCCGTAGTAGATATTCTGCGAGCAAGGCGCTCTACCGGCTTGCTAAAAACTAATGTGAAATAA", + "dna_sequence_length": 330, + "functions": [ + "CP4-57 prophage", + "toxin of the YpjF-YfjZ toxin-antitoxin system" + ], + "id": "CDS_2623", + "location": [ + [ + "NC_000913", + 2777453, + "+", + 330 + ] + ], + "md5": "68a5ad6d9ee6b1708af508603b05bb6d", + "parent_gene": "", + "protein_md5": "31148b73d1e24072fc7145d5f28825bb", + "protein_translation": "MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTGLLKTNVK", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008713" + ], + [ + "gene_synonym", + "ECK2644" + ], + [ + "gene_synonym", + "EcoGene:EG13213" + ], + [ + "gene_synonym", + "GI:90111474" + ], + [ + "gene_synonym", + "GeneID:948630" + ], + [ + "gene_synonym", + "JW5422" + ], + [ + "gene_synonym", + "NP_417134.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52143" + ], + [ + "gene_synonym", + "b2647" + ], + [ + "gene_synonym", + "ypjA" + ] + ], + "dna_sequence": "ATGAACAGGACCAGTCCCTATTATTGTCGCCGCTCAGTACTTTCCTTATTGATATCTGCCTTGATATATGCCCCGCCCGGGATGGCTGCCTTCACTACTAATGTTATTGGTGTGGTAAACGATGAGACTGTAGATGGCAACCAAAAAGTGGATGAACGAGGTACAACAAATAACACTCATATTATCAACCATGGCCAGCAGAATGTTCATGGCGGGGTATCTAATGGAAGTCTTATTGAATCTGGTGGATATCAAGATATAGGAAGTCATAACAATTTTGTGGGGCAGGCTAATAATACAACCATTAACGGTGGCAGACAGTCAATTCATGACGGGGGTATTTCCACAGGTACGACAATCGAGAGTGGCAATCAGGACGTTTATAAAGGGGGTATCAGCAATGGAACGACAATTAAGGGCGGTGCTTCACGCGTAGAGGGAGGGAGTGCGAATGGAATACTCATTGATGGTGGTAGCCAGATAGTAAAAGTTCAAGGGCATGCTGATGGTACAACGATAAATAAGTCTGGCTCTCAGGACGTAGTACAAGGAAGTCTGGCAACGAACACAACCATAAATGGTGGTCGACAGTATGTTGAACAGAGCACAGTAGAAACAACAACCATTAAAAATGGCGGTGAGCAAAGAGTATATGAGAGCCGTGCGCTGGACACGACGATTGAAGGCGGAACTCAGTCTCTGAATAGTAAGTCAACGGCAAAAAATACGCATATCTATTCTGGTGGCACGCAAATTGTTGATAACACCAGCACCTCGGATGTTATTGAAGTTTATTCTGGTGGCGTGCTTGATGTTAGGGGTGGTACGGCAACAAATGTTACCCAGCACGATGGTGCAATTTTAAAAACTAACACTAACGGTACGACGGTGAGCGGTACGAATAGTGAAGGTGCATTCTCCATCCACAATCACGTGGCAGACAATGTGTTGCTGGAAAACGGTGGTCATTTAGACATAAACGCATATGGTTCGGCAAACAAGACGATTATTAAAGATAAAGGAACAATGTCAGTTTTAACCAATGCTAAAGCTGATGCGACCCGAATAGATAATGGCGGGGTTATGGATGTTGCAGGAAACGCGACAAATACCATAATTAATGGTGGCACACAGAATATTAATAATTATGGCATAGCCACAGGCACCAATATCAACAGCGGAACGCAAAATATCAAAAGCGGCGGGAAAGCTGACACAACAATTATATCCTCCGGGAGCCGGCAGGTTGTTGAGAAAGATGGTACGGCAATTGGCAGCAATATTAGCGCCGGAGGCTCGCTGATTGTCTATACCGGCGGTATTGCACATGGGGTTAACCAGGAGACGGGCAGTGCTTTAGTTGCCAACACGGGTGCAGGGACTGATATCGAAGGATACAACAAGCTCTCTCACTTCACTATTACCGGAGGGGAGGCTAATTATGTTGTGCTGGAAAATACCGGCGAACTGACGGTAGTGGCTAAAACCTCGGCGAAAAATACTACCATTGATACTGGCGGTAAGCTGATTGTCCAGAAGGAGGCTAAAACAGATAGCACCAGACTTAATAATGGCGGCGTTCTGGAGGTTCAGGACGGTGGTGAGGCTAAGCATGTTGAGCAACAATCCGGCGGCGCATTAATTGCTTCCACGACCTCCGGAACACTTATCGAAGGAACCAACAGTTATGGTGATGCTTTCTACATCAGGAATTCAGAAGCTAAAAATGTAGTGCTGGAAAACGCTGGCTCATTAACAGTCGTCACTGGTTCCCGCGCAGTTGACACGATTATTAATGCCAACGGCAAAATGGATGTTTATGGAAAAGATGTTGGCACTGTACTCAATAGTGCTGGCACCCAAACAATATATGCCAGTGCCACTTCTGATAAAGCAAATATCAAAGGTGGCAAGCAAACGGTATATGGTTTAGCCACTGAAGCAAATATCGAAAGTGGTGAACAAATTGTTGATGGTGGGTCAACAGAGAAAACACACATCAATGGTGGCACGCAAACCGTTCAGAATTATGGTAAGGCAATCAATACCGATATCGTCTCTGGCCTACAACAAATTATGGCAAACGGGACAGCGGAAGGTTCCATTATTAATGGGGGTTCACAGGTAGTTAATGAGGGCGGCCTGGCTGAAAACTCGGTGCTTAATGACGGCGGCACACTCGATGTGCGGGAGAAAGGCAGCGCAACGGGGATACAGCAGAGTAGCCAGGGCGCTTTGGTTGCAACCACCAGGGCGACGCGGGTCACAGGAACACGCGCGGATGGCGTCGCGTTCAGCATCGAGCAGGGTGCGGCGAACAATATCCTGCTGGCAAATGGCGGCGTGTTAACCGTGGAGTCAGACACCTCTTCTGACAAAACACAGGTCAATATGGGCGGACGGGAGATCGTCAAAACAAAAGCCACTGCGACAGGCACGACGCTCACCGGCGGTGAACAAATTGTCGAGGGTGTGGCGAATGAGACAACAATTAACGACGGCGGAATACAAACAGTTTCAGCTAACGGAGAGGCAATAAAAACAAAGATCAATGAAGGCGGTACGCTGACAGTCAACGATAATGGCAAAGCGACAGATATCGTCCAGAACAGCGGTGCCGCTCTCCAGACGAGCACGGCTAACGGTATTGAAATCAGCGGTACTCACCAGTACGGTACTTTTTCCATTTCCGGCAATTTAGCGACCAATATGTTGCTGGAAAATGGCGGTAATTTATTGGTATTAGCAGGTACCGAAGCTCGCGACTCCACGGTTGGCAAGGGTGGGGCAATGCAAAACCTGGGTCAGGACTCCGCCACAAAGGTTAACTCTGGCGGGCAATATACCCTTGGGCGGTCAAAAGATGAGTTTCAGGCTCTGGCCCGGGCAGAAGATCTCCAGGTCGCTGGCGGTACGGCAATCGTCTACGCAGGTACGCTGGCGGATGCATCGGTCAGTGGCGCGACAGGAAGCCTGTCGTTAATGACGCCACGGGATAATGTTACGCCAGTTAAACTCGAAGGGGCGGTCCGGATTACCGATAGCGCGACATTGACTCTGGGAAATGGCGTCGATACCACGCTTGCCGACCTGACGGCTGCCAGCCGGGGCAGTGTCTGGCTTAACAGCAATAATTCCTGTGCAGGTACCAGCAACTGCGAATATAGAGTAAACAGTTTGCTACTCAACGACGGTGATGTTTATTTGTCAGCACAAACAGCAGCGCCTGCCACAACTAACGGTATCTACAATACGCTGACAACCAATGAACTTTCCGGTAGCGGTAATTTCTACCTGCATACCAACGTTGCAGGCTCCCGGGGCGATCAACTGGTCGTCAACAACAACGCCACTGGTAATTTTAAAATCTTTGTTCAGGATACCGGCGTCAGCCCACAGTCTGACGACGCGATGACGCTGGTGAAAACAGGGGGAGGGGATGCTTCGTTTACGCTGGGCAATACCGGCGGTTTCGTTGATCTTGGGACCTATGAGTATGTCCTGAAAAGTGACGGCAACAGCAACTGGAACCTGACCAATGATGTCAAACCCAACCCGGACCCCATCCCAAATCCAAAGCCAGACCCAAAACCCGATCCAAAGCCAGACCCAAATCCAAAACCAGACCCTACTCCCGATCCAACGCCGACACCCGTTCCGGAGAAACGCATTACGCCTTCTACGGCAGCCGTACTCAATATGGCAGCAACATTACCGTTGGTATTTGATGCTGAGCTAAACAGTATTCGCGAGCGGTTGAACATAATGAAAGCGAGTCCACACAACAATAATGTCTGGGGGGCGACGTATAACACCCGTAATAATGTCACCACCGATGCGGGTGCCGGGTTTGAGCAGACGCTGACCGGAATGACAGTGGGGATCGACAGCCGTAATGATATTCCTGAAGGAATTACCACGCTAGGCGCTTTTATGGGCTATTCCCATTCACATATCGGTTTTGATCGCGGAGGACATGGCAGTGTGGGCAGTTATTCTCTGGGCGGCTATGCCAGTTGGGAACATGAAAGTGGTTTCTATCTGGACGGTGTCGTGAAGCTGAACCGTTTTAAAAGTAACGTAGCAGGTAAAATGAGCAGCGGTGGAGCCGCCAATGGCAGTTACCACAGCAACGGGCTGGGCGGTCACATTGAAACCGGGATGCGATTTACCGATGGTAACTGGAACCTGACGCCGTATGCATCGTTAACGGGGTTCACCGCTGATAACCCCGAATATCATTTATCCAATGGCATGAAATCGAAATCAGTCGATACCCGCAGTATATATCGTGAACTGGGCGCAACGCTGAGTTACAACATGCGTCTGGGGAACGGTATGGAAGTTGAGCCGTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAAGTGAATAGTGACGGTAATTTCGTCAATTATTTGTCGGGCAGACGTGGAATATACCAGGCAGGTATTAAAGCCTCATTCAGCAGTACGTTAAGCGGGCATCTTGGGGTGGGGTATAGCCATAGTGCCGGTGTGGAATCCCCGTGGAACGCGGTAGCTGGTGTGAACTGGTCGTTCTGA", + "dna_sequence_length": 4581, + "functions": [ + "adhesin-like autotransporter" + ], + "id": "CDS_2624", + "location": [ + [ + "NC_000913", + 2782726, + "-", + 4581 + ] + ], + "md5": "b08a8daa44b18b1917a41ec6d621d7b2", + "parent_gene": "", + "protein_md5": "780656db6b4a9033a93ff596d68cff87", + "protein_translation": "MNRTSPYYCRRSVLSLLISALIYAPPGMAAFTTNVIGVVNDETVDGNQKVDERGTTNNTHIINHGQQNVHGGVSNGSLIESGGYQDIGSHNNFVGQANNTTINGGRQSIHDGGISTGTTIESGNQDVYKGGISNGTTIKGGASRVEGGSANGILIDGGSQIVKVQGHADGTTINKSGSQDVVQGSLATNTTINGGRQYVEQSTVETTTIKNGGEQRVYESRALDTTIEGGTQSLNSKSTAKNTHIYSGGTQIVDNTSTSDVIEVYSGGVLDVRGGTATNVTQHDGAILKTNTNGTTVSGTNSEGAFSIHNHVADNVLLENGGHLDINAYGSANKTIIKDKGTMSVLTNAKADATRIDNGGVMDVAGNATNTIINGGTQNINNYGIATGTNINSGTQNIKSGGKADTTIISSGSRQVVEKDGTAIGSNISAGGSLIVYTGGIAHGVNQETGSALVANTGAGTDIEGYNKLSHFTITGGEANYVVLENTGELTVVAKTSAKNTTIDTGGKLIVQKEAKTDSTRLNNGGVLEVQDGGEAKHVEQQSGGALIASTTSGTLIEGTNSYGDAFYIRNSEAKNVVLENAGSLTVVTGSRAVDTIINANGKMDVYGKDVGTVLNSAGTQTIYASATSDKANIKGGKQTVYGLATEANIESGEQIVDGGSTEKTHINGGTQTVQNYGKAINTDIVSGLQQIMANGTAEGSIINGGSQVVNEGGLAENSVLNDGGTLDVREKGSATGIQQSSQGALVATTRATRVTGTRADGVAFSIEQGAANNILLANGGVLTVESDTSSDKTQVNMGGREIVKTKATATGTTLTGGEQIVEGVANETTINDGGIQTVSANGEAIKTKINEGGTLTVNDNGKATDIVQNSGAALQTSTANGIEISGTHQYGTFSISGNLATNMLLENGGNLLVLAGTEARDSTVGKGGAMQNLGQDSATKVNSGGQYTLGRSKDEFQALARAEDLQVAGGTAIVYAGTLADASVSGATGSLSLMTPRDNVTPVKLEGAVRITDSATLTLGNGVDTTLADLTAASRGSVWLNSNNSCAGTSNCEYRVNSLLLNDGDVYLSAQTAAPATTNGIYNTLTTNELSGSGNFYLHTNVAGSRGDQLVVNNNATGNFKIFVQDTGVSPQSDDAMTLVKTGGGDASFTLGNTGGFVDLGTYEYVLKSDGNSNWNLTNDVKPNPDPIPNPKPDPKPDPKPDPNPKPDPTPDPTPTPVPEKRITPSTAAVLNMAATLPLVFDAELNSIRERLNIMKASPHNNNVWGATYNTRNNVTTDAGAGFEQTLTGMTVGIDSRNDIPEGITTLGAFMGYSHSHIGFDRGGHGSVGSYSLGGYASWEHESGFYLDGVVKLNRFKSNVAGKMSSGGAANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMKSKSVDTRSIYRELGATLSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVNSDGNFVNYLSGRRGIYQAGIKASFSSTLSGHLGVGYSHSAGVESPWNAVAGVNWSF", + "protein_translation_length": 1526, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008721" + ], + [ + "gene_synonym", + "ECK2645" + ], + [ + "gene_synonym", + "EcoGene:EG14310" + ], + [ + "gene_synonym", + "GeneID:947250" + ], + [ + "gene_synonym", + "JW5423" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76611" + ], + [ + "gene_synonym", + "b2648" + ], + [ + "gene_synonym", + "pinH" + ], + [ + "gene_synonym", + "ypjG" + ] + ], + "dna_sequence": "AACCGTGGCAGGAGGTCCGGACTGAAAAAACTGGTCAGGACATCATCGGCAGGGAACGCACTGCTAGTCTGTAAACTGAACCGACTGGGGCGCAGTATGTGGCATCTTGTCGTGCTGTTGGAGGAGCTGTGCGAACGTGGTATTAACTTTCGTGCTCTGGCCCAATCTATATTTGCCCAACAATGGGGGGACGAATGCTGTAAAAGTAAAACAATCTGCGATCTCAAAGTTATTGTGTGA", + "dna_sequence_length": 240, + "id": "CDS_2625", + "location": [ + [ + "NC_000913", + 2783304, + "-", + 240 + ] + ], + "md5": "5f1869ab28a278b4b46bff3a8f8da852", + "parent_gene": "", + "protein_md5": "67922a6fbb072b91adcaa9ba0f46af57", + "protein_translation": "NRGRRSGLKKLVRTSSAGNALLVCKLNRLGRSMWHLVVLLEELCERGINFRALAQSIFAQQWGDECCKSKTICDLKVIV", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008724" + ], + [ + "gene_synonym", + "ASAP:ABE-0008727" + ], + [ + "gene_synonym", + "ECK2646" + ], + [ + "gene_synonym", + "EcoGene:EG13519" + ], + [ + "gene_synonym", + "GeneID:947640" + ], + [ + "gene_synonym", + "JW2629" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76613" + ], + [ + "gene_synonym", + "b2650" + ], + [ + "gene_synonym", + "ypjB" + ], + [ + "gene_synonym", + "ypjC" + ] + ], + "dna_sequence": "ATGTTAGTTAGTAAAAGCAACGGATTTAACGCTAGCGCAGTTTTGGGTAGTGGAAGTTATAATGAAAATAAATCTTCTAAACACATGGAGCTACTAGCTCATAGTATTTTAAAATTAATTTGTAAGGAAGCTGCATCAGAGACGTATCGCGGTGCTCTTGAAACTTTACAAAAAATGATGTCTGAATGTATATATCAAGAAGGCAACGCCTTTGTCATTATGGGAGCTGGAGAACAATTAAAACGTATTAAATATGAAGTTGGTGAAAATAACTTAAAGGTATTCAACGTACACTTTAATAATAATCACGAGTTAGTTAGTTCTGGTGAGCCTGACGTAATATGTTTAAGCAAGCAGGTCTGGGAAAATCTTCTCATTAAACTAAAGCTGGAAAACAATGAAAATGTGTTTTCTGAAACTAAAAAATTATCGAATAAAAATAATGCCGATCAGTTTTTTGAATGCGCTAAAAGAAATGAATAGAACCTTTTCGATAATATAAGAAAAAGTGATTTTCATGTTGGTTTACTTAAGCCAAGTAGTACGCGTAGTGTTATTTTAGAAACGCCGCCAAATGTCTGTATGGAATCACGTAATTCATATGAAAACAAAATAGATGAGATTTCATCTTTGTCAGAGTCAAAGGAACACCCCATAGATATTCAAGAAAAAAAAGATGCGTTTGTGAATGAGTTCAAGGGGGTATTATTTGATAAAAATACAAGGTCTTCAGAGCTTCTGTTTAATTTTTATGAGTGTTGCTATAAGTTTTTACCAAGAGCTCAGCCTCAAGATAAAATCGATAGCTATAATTCAGCACTGCAAGCTTTTTCCATTTTTTGTTCATCTACGTTGACACATAATAATATAGGCTTTGATTTCAAATTATTTCCTGAAGTCAAGCTGTCTGGAGAACATCTTGAAACGGTATTCAAATACAAAAATGGCGATGATGTCCGGGAGATAGCCAAAATTAACATTACTCTCCAAAAAGAAGAGGGTGGTTTATATAATTTACGTGGATTGGATTTTAAGGGGTGCTTCTTTTCTGGACAGAACTTCAGTAACTATGATATTCAATATGTGAACTGGGGAACGTCATTGTTTGATGTTGATACTCCGTGTATTTTTAATGCGCCTGCTTACAACAAGAGTAATGAAAAATCATTAAAACCTGTGAGCGAAAACGGTTTAAGTGGAGTATTGACTGATCGTAATAATAAAATAAAACTCATCACGGGCGTGGCACCATTCGATGATATTTTATTTATGGATGATGACTTTGATGATAGTTCCTCTGAGGATGATCCCGTTGAGAATAGTCCTGTTGTGACTAGTCCCGTTGTATCAAGTTCTAAAAGCAGTTTTCAATGA", + "dna_sequence_length": 1374, + "id": "CDS_2626", + "location": [ + [ + "NC_000913", + 2785011, + "-", + 1374 + ] + ], + "md5": "c899c4a0f063ce376ac1c677a845f8f0", + "parent_gene": "", + "protein_md5": "99720b29b6e187376d41c1efe404450d", + "protein_translation": "MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008739" + ], + [ + "gene_synonym", + "ASAP:ABE-0008747" + ], + [ + "gene_synonym", + "ASAP:ABE-0008751" + ], + [ + "gene_synonym", + "ASAP:ABE-0174112" + ], + [ + "gene_synonym", + "ECK2649" + ], + [ + "gene_synonym", + "EcoGene:EG13520" + ], + [ + "gene_synonym", + "GeneID:2847762" + ], + [ + "gene_synonym", + "JW5425" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76616" + ], + [ + "gene_synonym", + "b4462" + ], + [ + "gene_synonym", + "ygaQ" + ], + [ + "gene_synonym", + "ygaR" + ], + [ + "gene_synonym", + "yqaC" + ], + [ + "gene_synonym", + "yqaD" + ] + ], + "dna_sequence": "ATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGTTATTAATGATCTGTTAAAAAACGATTATAAAATTTCCCTTTCTCCAGATACAACTTACCGAGAGTTGAATAAAGCAGCACAGCGTAGCATTACAGCGCCAGACAGGATAGGAGAAAGAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATATTAACGTGACGTCACCTTCCGGACAGCAAGAAACATTTAAAATATTAATCAATCTAGAACATCTACGGCAAACACTTGAACGTAAATCTCTTACTGCTGTTCAGAAATCACAATGTGAAATCATCACCCCCAAAAAACCTGGCGAAGCGATTCTTCATGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCTGATTATACCTTTAACTTTATGGGAATTGGGGGTAGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGTAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGTTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATGAGCGGTTACACAATACTAACTTATTTAACCCAAAATATCATAAAAAAGCCGTTATGAATTACATGGAATATCTGGTAACTTGTCAGTTGGATGAACAACAAATGTCATCACTGCTTTATGAAAGAGATGATTTAAGCGCCATTGATTTTTCATTGCTCATGAAAACGATAAAAGCCTTTTCATTTGGTGGAGATCTTCAAACCCTTGCATCAAAACCGGGTTCCACAATCTCAAGTATCCCATCAGAAAGACGGATATTGATTAACATTAACCACGATTTTCCTAACAATGGTAATCTTTTCAATGACTTTCTATTTAACCATCAACAAGATGAACAATTAGCAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAATCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAGCTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTGGGGATTCTGTGAACATTAATCACTCTCCTCATGATGGACTAGTTATAATAAATAAAGGAAACGAAGAAGTTGAAGGTACCTGGCCTAACAAATTGCAACCTGGAATATACAAAAACATGGGGAGTAATAGCGTTAACATTATTATTAATAATACCCGAAAAATTATCCCCCCTGGTAAAGTATTTACGCTTAGAGGCGGAACTCTAAATATCAATATTCCTGGGCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAA", + "dna_sequence_length": 2253, + "id": "CDS_2627", + "location": [ + [ + "NC_000913", + 2786397, + "+", + 2253 + ] + ], + "md5": "cc45c6e0252c1fdf82d968ac2ca0c4a7", + "parent_gene": "", + "protein_md5": "befaac22accb26ff95870f362057c512", + "protein_translation": "MFSIKPGPRNLPIDNPTLLSWNITDGDLNSKLNTLEYLNCITNIINSCGVYPQGLKDREIISTFHAEKVINDLLKNDYKISLSPDTTYRELNKAAQRSITAPDRIGERKT", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008754" + ], + [ + "gene_synonym", + "ECK2653" + ], + [ + "gene_synonym", + "EcoGene:EG13523" + ], + [ + "gene_synonym", + "GI:90111476" + ], + [ + "gene_synonym", + "GeneID:948076" + ], + [ + "gene_synonym", + "JW5427" + ], + [ + "gene_synonym", + "NP_417145.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76621" + ], + [ + "gene_synonym", + "b2659" + ], + [ + "gene_synonym", + "csi-12" + ], + [ + "gene_synonym", + "csiD" + ], + [ + "gene_synonym", + "ygaT" + ] + ], + "dna_sequence": "ATGAATGCACTGACCGCCGTACAAAATAACGCTGTCGATTCAGGCCAGGACTATAGCGGATTCACCCTCACCCCGTCGGCGCAATCCCCGCGTCTGCTGGAACTCACCTTCACCGAACAGACGACCAAACAGTTTCTTGAGCAGGTTGCCGAGTGGCCCGTGCAGGCGCTGGAGTACAAATCGTTTCTGCGTTTTCGGGTAGCCAAAATTCTTGACGATCTATGTGCGAACCAGCTGCAACCATTGCTGTTGAAGACGTTGCTAAACCGCGCTGAAGGTGCGTTGTTGATCAATGCGGTGGGTGTCGATGATGTGAAGCAAGCGGATGAGATGGTGAAGCTGGCGACGGCGGTGGCGCATCTGATTGGCCGTTCCAATTTCGATGCGATGAGCGGTCAGTATTACGCGCGTTTTGTAGTGAAAAATGTCGATAACTCAGACAGCTATCTGCGCCAGCCGCACCGCGTGATGGAGCTACACAACGACGGCACGTATGTCGAAGAGATAACCGATTACGTGCTGATGATGAAAATCGACGAGCAAAACATGCAGGGCGGAAATTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAA", + "dna_sequence_length": 978, + "functions": [ + "carbon starvation protein" + ], + "id": "CDS_2628", + "location": [ + [ + "NC_000913", + 2788985, + "+", + 978 + ] + ], + "md5": "a4b4192ed2203fd385a68bcb0ab88778", + "parent_gene": "", + "protein_md5": "f98e30ebc82a2a04211ed351d35630ae", + "protein_translation": "MNALTAVQNNAVDSGQDYSGFTLTPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVAKILDDLCANQLQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYASNHYQTHQ", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008756" + ], + [ + "gene_synonym", + "ECK2654" + ], + [ + "gene_synonym", + "EcoGene:EG12387" + ], + [ + "gene_synonym", + "GI:90111477" + ], + [ + "gene_synonym", + "GeneID:948069" + ], + [ + "gene_synonym", + "JW2635" + ], + [ + "gene_synonym", + "NP_417146.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37339" + ], + [ + "gene_synonym", + "b2660" + ], + [ + "gene_synonym", + "lhgO" + ], + [ + "gene_synonym", + "ygaF" + ] + ], + "dna_sequence": "ATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTACGACAACTGCGGCAAGATGCTGGTTGCCACGTCCGATCTCGAAATGGAACGGATGCGCGCCTTATGGGAACGCACAGCGGCGAACGGTATCGAGCGCGAATGGCTTAACGCCGACGAACTGCGCGAGCGCGAACCGAATATCACCGGGCTCGGCGGCATTTTTGTGCCGTCCAGCGGCATTGTCAGCTACCGCGACGTGACGGCGGCGATGGCAAAAATCTTCCAGTCCAGAGGCGGTGAAATTATCTATAACGCCGAAGTCAGCGGGCTTAATGAGCATAAAAACGGCGTGGTGATACGTACCCGTCAGGGCGGCGAATATGAAGCATCAACGCTGATTAGCTGTTCCGGGCTGATGGCTGACCGGCTGGTGAAAATGCTCGGACTCGAACCGGGCTTTATCATCTGCCCGTTCCGTGGCGAGTATTTCCGCCTTGCGCCGGAGCATAACCAGATTGTTAACCACCTGATTTACCCCATTCCCGACCCGGCAATGCCGTTTTTGGGCGTTCATCTCACCCGCATGATCGACGGCAGCGTGACCGTCGGGCCAAACGCGGTGCTGGCTTTCAAACGCGAAGGCTATCGCAAGCGCGACTTCTCATTTAGCGACACGCTGGAGATTTTGGGCTCGTCGGGGATTCGCCGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAGGTACAAACGCTGTTGGCAAGCCAGAGTAACCCCGGACGCACGCTGCGAGCGGCACGTAGTGTGGATGCCTTACACGCCGCATTTAATCAATAA", + "dna_sequence_length": 1269, + "functions": [ + "L-2-hydroxyglutarate oxidase" + ], + "id": "CDS_2629", + "location": [ + [ + "NC_000913", + 2789982, + "+", + 1269 + ] + ], + "md5": "34c3f7d26facbc3852e456ed2d4a3e50", + "parent_gene": "", + "protein_md5": "22b539cf4765825aa8119d1db89d6994", + "protein_translation": "MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ", + "protein_translation_length": 422, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008758" + ], + [ + "gene_synonym", + "ECK2655" + ], + [ + "gene_synonym", + "EcoGene:EG11329" + ], + [ + "gene_synonym", + "GI:16130575" + ], + [ + "gene_synonym", + "GeneID:948060" + ], + [ + "gene_synonym", + "JW2636" + ], + [ + "gene_synonym", + "NP_417147.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25526" + ], + [ + "gene_synonym", + "b2661" + ], + [ + "gene_synonym", + "gabD" + ] + ], + "dna_sequence": "ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGGCGACACCATTCCTGGTCATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCGGCGATGATTACCCGCAAAGCCGGTCCGGCGCTGGCAGCAGGCTGCACCATGGTGCTGAAGCCCGCCAGTCAGACGCCGTTCTCTGCGCTGGCGCTGGCGGAGCTGGCGATCCGCGCGGGCGTTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGGGCGCGGTCGGTAACGAACTGACCAGTAACCCGCTGGTGCGCAAACTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAGTTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATGAAGCTGATGTGATTGCGCAAGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTTCCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGCATTATTTCCAATGAAGTGGCCCCGTTCGGCGGCATCAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATCGGTCTTTAA", + "dna_sequence_length": 1449, + "functions": [ + "succinate-semialdehyde dehydrogenase I, NADP-dependent" + ], + "id": "CDS_2630", + "location": [ + [ + "NC_000913", + 2791273, + "+", + 1449 + ] + ], + "md5": "6cfe9f7509d4ceadfe00e8ccbc32c2e4", + "parent_gene": "", + "protein_md5": "52a834ce1be022e0b9df5ff1b3364874", + "protein_translation": "MKLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL", + "protein_translation_length": 482, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008760" + ], + [ + "gene_synonym", + "ECK2656" + ], + [ + "gene_synonym", + "EcoGene:EG10361" + ], + [ + "gene_synonym", + "GI:16130576" + ], + [ + "gene_synonym", + "GeneID:948067" + ], + [ + "gene_synonym", + "JW2637" + ], + [ + "gene_synonym", + "NP_417148.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22256" + ], + [ + "gene_synonym", + "b2662" + ], + [ + "gene_synonym", + "gabT" + ] + ], + "dna_sequence": "ATGAACAGCAATAAAGAGTTAATGCAGCGCCGCAGTCAGGCGATTCCCCGTGGCGTTGGGCAAATTCACCCGATTTTCGCTGACCGCGCGGAAAACTGCCGGGTGTGGGACGTTGAAGGCCGTGAGTATCTTGATTTCGCGGGCGGGATTGCGGTGCTCAATACCGGGCACCTGCATCCGAAGGTGGTGGCCGCGGTGGAAGCGCAGTTGAAAAAACTGTCGCACACCTGCTTCCAGGTGCTGGCTTACGAGCCGTATCTGGAGCTGTGCGAGATTATGAATCAGAAGGTGCCGGGCGATTTCGCCAAGAAAACGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGAATCCGTACTCTGCGGGCATGGGGCTGATGCCGGGTCATGTTTATCGCGCGCTTTATCCTTGCCCGCTGCACGGCATAAGCGAGGATGACGCTATCGCCAGCATCCACCGGATCTTCAAAAATGATGCCGCGCCGGAAGATATCGCCGCCATCGTGATTGAGCCGGTTCAGGGCGAAGGCGGTTTCTACGCCTCGTCGCCAGCCTTTATGCAGCGTTTACGCGCTCTGTGTGACGAGCACGGGATCATGCTGATTGCCGATGAAGTGCAGAGCGGCGCGGGGCGTACCGGCACGCTGTTTGCGATGGAGCAGATGGGCGTTGCGCCGGATCTTACCACCTTTGCGAAATCGATCGCGGGCGGCTTCCCGCTGGCGGGCGTCACCGGGCGCGCGGAAGTAATGGATGCCGTCGCTCCAGGCGGTCTGGGCGGCACCTATGCGGGTAACCCGATTGCCTGCGTGGCTGCGCTGGAAGTGTTGAAGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGACGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAG", + "dna_sequence_length": 1281, + "functions": [ + "4-aminobutyrate aminotransferase, PLP-dependent" + ], + "id": "CDS_2631", + "location": [ + [ + "NC_000913", + 2792735, + "+", + 1281 + ] + ], + "md5": "c0f65fdc65ed8a5f9b0c0ea8560bc7c6", + "parent_gene": "", + "protein_md5": "81c0dd1a7823ed99a23cd0ae419b6e0f", + "protein_translation": "MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008763" + ], + [ + "gene_synonym", + "ECK2657" + ], + [ + "gene_synonym", + "EcoGene:EG11330" + ], + [ + "gene_synonym", + "GI:16130577" + ], + [ + "gene_synonym", + "GeneID:948049" + ], + [ + "gene_synonym", + "JW2638" + ], + [ + "gene_synonym", + "NP_417149.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25527" + ], + [ + "gene_synonym", + "b2663" + ], + [ + "gene_synonym", + "gabP" + ] + ], + "dna_sequence": "ATGGGGCAATCATCGCAACCACATGAGTTAGGCGGCGGGCTGAAGTCACGCCACGTCACCATGTTGTCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGTTTTCCACCTATGCCGATAAAGCCATTGGTCGCTGGGCGGGCTATACCATCGGCTGGTTGTACTGGTGGTTTTGGGTACTGGTTATCCCGCTGGAAGCCAACATCGCCGCCATGATCCTGCACTCATGGGTTCCAGGCATTCCCATCTGGTTATTTTCCCTCGTCATTACCCTCGCCTTAACTGGCAGTAACTTATTAAGCGTTAAAAACTACGGCGAATTTGAGTTCTGGCTGGCGCTGTGCAAAGTCATCGCTATCCTGGCCTTTATTTTCCTTGGTGCAGTCGCAATTAGCGGTTTTTACCCGTATGCCGAAGTGAGCGGGATCTCAAGATTGTGGGATAGCGGCGGCTTTATGCCCAACGGTTTCGGTGCGGTATTAAGCGCGATGTTGATCACCATGTTCTCGTTTATGGGCGCAGAAATTGTCACCATTGCCGCCGCGGAATCCGACACGCCGGAAAAACATATTGTCCGCGCCACCAACTCGGTTATCTGGCGTATTTCTATCTTCTATTTATGTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGTAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGA", + "dna_sequence_length": 1401, + "functions": [ + "gamma-aminobutyrate transporter" + ], + "id": "CDS_2632", + "location": [ + [ + "NC_000913", + 2794253, + "+", + 1401 + ] + ], + "md5": "ce006dd0c2aafd93bf5cb59c4411e4fa", + "parent_gene": "", + "protein_md5": "356b6e7518ccc81b5b40937fefb56545", + "protein_translation": "MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTGLLAIGIICTVPIMARWKKLVLWQKTPVHNTR", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008765" + ], + [ + "gene_synonym", + "ECK2658" + ], + [ + "gene_synonym", + "EcoGene:EG12386" + ], + [ + "gene_synonym", + "GI:90111478" + ], + [ + "gene_synonym", + "GeneID:948055" + ], + [ + "gene_synonym", + "JW2639" + ], + [ + "gene_synonym", + "NP_417150.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37338" + ], + [ + "gene_synonym", + "b2664" + ], + [ + "gene_synonym", + "csiR" + ], + [ + "gene_synonym", + "gabC" + ], + [ + "gene_synonym", + "ygaE" + ] + ], + "dna_sequence": "ATGACCATTACGTCTCTGGATGGCTATCGCTGGCTGAAGAACGATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAA", + "dna_sequence_length": 663, + "functions": [ + "transcriptional repressor of csiD" + ], + "id": "CDS_2633", + "location": [ + [ + "NC_000913", + 2795674, + "+", + 663 + ] + ], + "md5": "4bf18b961e98f6b5118a8699a0e99512", + "parent_gene": "", + "protein_md5": "0eff3dcdb6f0ee4910cadd8d9338a5eb", + "protein_translation": "MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008767" + ], + [ + "gene_synonym", + "ECK2659" + ], + [ + "gene_synonym", + "EcoGene:EG12675" + ], + [ + "gene_synonym", + "GI:16130579" + ], + [ + "gene_synonym", + "GeneID:947144" + ], + [ + "gene_synonym", + "JW2640" + ], + [ + "gene_synonym", + "NP_417151.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE6" + ], + [ + "gene_synonym", + "b2665" + ], + [ + "gene_synonym", + "ygaU" + ], + [ + "gene_synonym", + "yzzM" + ] + ], + "dna_sequence": "ATGGGTCTGTTCAATTTTGTGAAAGATGCCGGAGAAAAACTCTGGGACGCGGTTACAGGTCAGCACGATAAAGACGATCAGGCGAAGAAGGTGCAGGAGCATCTGAACAAAACCGGTATACCGGATGCCGATAAAGTGAATATTCAAATTGCCGACGGCAAAGCGACGGTCACTGGTGACGGCCTGAGTCAGGAGGCGAAGGAGAAAATCCTTGTTGCGGTGGGGAATATTTCCGGTATTGCCAGTGTCGATGATCAGGTGAAAACGGCGACACCAGCCACTGCCAGCCAGTTTTATACCGTTAAGTCTGGCGACACTCTGAGTGCCATTTCCAAACAGGTCTACGGTAACGCTAATCTGTACAATAAAATCTTCGAAGCGAATAAACCGATGCTAAAAAGCCCGGATAAAATTTATCCGGGGCAAGTGTTGCGTATTCCGGAAGAGTAG", + "dna_sequence_length": 450, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2634", + "location": [ + [ + "NC_000913", + 2796786, + "-", + 450 + ] + ], + "md5": "d313b8477ebfd976857e1eed0c17277c", + "parent_gene": "", + "protein_md5": "4f563011ab0db0a71851097347585757", + "protein_translation": "MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDADKVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008770" + ], + [ + "gene_synonym", + "ECK2660" + ], + [ + "gene_synonym", + "EcoGene:EG14313" + ], + [ + "gene_synonym", + "GI:16130580" + ], + [ + "gene_synonym", + "GeneID:947138" + ], + [ + "gene_synonym", + "JW2641" + ], + [ + "gene_synonym", + "NP_417152.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE42" + ], + [ + "gene_synonym", + "b2666" + ], + [ + "gene_synonym", + "yqaE" + ] + ], + "dna_sequence": "ATGGGTTTCTGGAGAATCGTCATCACCATCATTCTGCCGCCGCTCGGCGTGCTGCTCGGTAAAGGGTTCGGTTGGGCGTTCATTATTAATATTCTGTTGACACTGCTTGGGTATATCCCCGGTTTGATTCACGCGTTCTGGGTGCAAACCCGCGATTAA", + "dna_sequence_length": 159, + "functions": [ + "cyaR sRNA-regulated protein" + ], + "id": "CDS_2635", + "location": [ + [ + "NC_000913", + 2797028, + "-", + 159 + ] + ], + "md5": "b30de27bc4a06ecbf687083b69d39555", + "parent_gene": "", + "protein_md5": "3ab1e503e3e953ea6b91720eb832faaf", + "protein_translation": "MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD", + "protein_translation_length": 52, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008784" + ], + [ + "gene_synonym", + "ECK2661" + ], + [ + "gene_synonym", + "EcoGene:EG13524" + ], + [ + "gene_synonym", + "GI:16130581" + ], + [ + "gene_synonym", + "GeneID:947136" + ], + [ + "gene_synonym", + "JW2642" + ], + [ + "gene_synonym", + "NP_417153.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77295" + ], + [ + "gene_synonym", + "b2667" + ], + [ + "gene_synonym", + "ygaV" + ] + ], + "dna_sequence": "ATGACTGAACTCGCGCAATTACAGGCCAGTGCCGAACAGGCAGCGGCCTTATTGAAAGCAATGAGCCACCCTAAACGATTGCTGATTCTGTGCATGCTTAGCGGTTCCCCCGGCACCAGCGCGGGAGAGCTGACGCGCATTACCGGACTGAGTGCCTCTGCGACATCACAGCATCTCGCTCGTATGCGGGACGAAGGGCTTATCGACAGCCAACGGGATGCCCAACGCATTCTATATTCCATTAAAAATGAGGCGGTAAATGCCATTATCGCCACCCTGAAAAATGTCTATTGTCCGTAA", + "dna_sequence_length": 300, + "functions": [ + "tributyltin-inducible repressor of ygaVP" + ], + "id": "CDS_2636", + "location": [ + [ + "NC_000913", + 2797211, + "+", + 300 + ] + ], + "md5": "2b5aa3a0729678bd4217a9ee7a24ba1a", + "parent_gene": "", + "protein_md5": "22983af105ce88325fc502be2cc0147d", + "protein_translation": "MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008786" + ], + [ + "gene_synonym", + "ECK2662" + ], + [ + "gene_synonym", + "EcoGene:EG13288" + ], + [ + "gene_synonym", + "GI:16130582" + ], + [ + "gene_synonym", + "GeneID:947135" + ], + [ + "gene_synonym", + "JW2643" + ], + [ + "gene_synonym", + "NP_417154.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55734" + ], + [ + "gene_synonym", + "b2668" + ], + [ + "gene_synonym", + "ygaP" + ] + ], + "dna_sequence": "ATGGCTTTGACAACCATTTCGCCGCATGATGCACAAGAATTAATCGCACGCGGCGCAAAGTTAATCGATATTCGTGATGCTGATGAATATCTTCGTGAACATATTCCTGAAGCAGATCTGGCTCCATTATCCGTGCTGGAACAGTCAGGTCTTCCGGCTAAATTACGTCACGAGCAAATTATATTCCACTGCCAGGCAGGTAAACGCACCAGTAATAATGCCGATAAATTAGCAGCGATTGCCGCCCCCGCAGAAATCTTTTTACTCGAAGATGGGATTGATGGCTGGAAAAAAGCAGGATTGCCAGTAGCGGTAAATAAATCTCAACCCTTGCCGTTAATGCGCCAGGTGCAGATCGCTGCGGGTGGTTTAATATTAATCGGCGTTGTACTGGGTTATACCGTAAATAGCGGTTTCTTCTTATTAAGTGGCTTTGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGA", + "dna_sequence_length": 525, + "functions": [ + "DUF2892 family inner membrane rhodanese" + ], + "id": "CDS_2637", + "location": [ + [ + "NC_000913", + 2797520, + "+", + 525 + ] + ], + "md5": "1fdcb3fa4f77952c5600a709f1ae6a64", + "parent_gene": "", + "protein_md5": "edf88d4c464f851991fa21c4a3a4d605", + "protein_translation": "MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRHEQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQRA", + "protein_translation_length": 174, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008788" + ], + [ + "gene_synonym", + "ECK2663" + ], + [ + "gene_synonym", + "EcoGene:EG11554" + ], + [ + "gene_synonym", + "GI:16130583" + ], + [ + "gene_synonym", + "GeneID:947130" + ], + [ + "gene_synonym", + "JW2644" + ], + [ + "gene_synonym", + "NP_417155.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACG1" + ], + [ + "gene_synonym", + "b2669" + ], + [ + "gene_synonym", + "hnsB" + ], + [ + "gene_synonym", + "hsm-3" + ], + [ + "gene_synonym", + "rsv" + ], + [ + "gene_synonym", + "stpA" + ] + ], + "dna_sequence": "ATGTCCGTAATGTTACAAAGTTTAAATAACATTCGCACCCTCCGTGCGATGGCTCGCGAATTCTCCATTGACGTTCTTGAAGAAATGCTCGAAAAATTCAGGGTTGTCACTAAAGAAAGACGTGAAGAAGAAGAACAGCAGCAGCGTGAACTGGCAGAGCGCCAGGAAAAAATTAGCACCTGGCTGGAGCTGATGAAAGCTGACGGAATTAACCCGGAAGAGTTATTGGGTAATAGCTCTGCTGCTGCACCACGCGCTGGTAAAAAACGCCAGCCGCGTCCGGCGAAATATAAATTCACCGATGTTAACGGTGAAACTAAAACCTGGACCGGTCAGGGCCGTACACCGAAGCCAATTGCTCAGGCGCTGGCAGAAGGTAAATCTCTCGACGATTTCCTGATCTAA", + "dna_sequence_length": 405, + "functions": [ + "DNA binding protein, nucleoid-associated" + ], + "id": "CDS_2638", + "location": [ + [ + "NC_000913", + 2798495, + "-", + 405 + ] + ], + "md5": "ce63414f7f1386f537404693fb22dd2a", + "parent_gene": "", + "protein_md5": "a8caa264b5687bad9e7a13fb2c1eb459", + "protein_translation": "MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008793" + ], + [ + "gene_synonym", + "ECK2664" + ], + [ + "gene_synonym", + "EcoGene:EG13525" + ], + [ + "gene_synonym", + "GI:16130584" + ], + [ + "gene_synonym", + "GeneID:947147" + ], + [ + "gene_synonym", + "JW2645" + ], + [ + "gene_synonym", + "NP_417156.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64550" + ], + [ + "gene_synonym", + "alaE" + ], + [ + "gene_synonym", + "b2670" + ], + [ + "gene_synonym", + "ygaW" + ] + ], + "dna_sequence": "ATGTTCTCACCGCAGTCACGCTTGCGTCATGCAGTTGCAGATACGTTCGCGATGGTTGTTTACTGTTCTGTCGTGAACATGTGTATTGAAGTTTTCCTCTCCGGAATGAGCTTCGAACAGTCTTTTTATTCCAGATTGGTAGCGATTCCGGTGAACATCTTAATTGCATGGCCATACGGTATGTACCGTGATCTGTTTATGCGCGCGGCACGCAAAGTTAGCCCGTCGGGCTGGATAAAAAATCTGGCGGATATCCTGGCTTATGTGACGTTCCAGTCACCGGTGTATGTGGCGATCTTGTTAGTGGTGGGCGCAGACTGGCATCAGATTATGGCGGCGGTCAGTTCAAACATCGTTGTTTCGATGTTGATGGGGGCGGTTTATGGCTACTTCCTCGATTATTGCCGCCGACTGTTTAAAGTCAGCCGTTACCAGCAGGTAAAAGCCTGA", + "dna_sequence_length": 450, + "functions": [ + "alanine exporter, alanine-inducible, stress-responsive" + ], + "id": "CDS_2639", + "location": [ + [ + "NC_000913", + 2799164, + "+", + 450 + ] + ], + "md5": "84dc855d43f8c2c4226cfa9c6457d1d1", + "parent_gene": "", + "protein_md5": "c003da0fb50adf0486e1f4625ded4e31", + "protein_translation": "MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYSRLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLVVGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008795" + ], + [ + "gene_synonym", + "ECK2665" + ], + [ + "gene_synonym", + "EcoGene:EG12201" + ], + [ + "gene_synonym", + "GI:16130585" + ], + [ + "gene_synonym", + "GeneID:947156" + ], + [ + "gene_synonym", + "JW2646" + ], + [ + "gene_synonym", + "NP_417157.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD53" + ], + [ + "gene_synonym", + "b2671" + ], + [ + "gene_synonym", + "ygaC" + ] + ], + "dna_sequence": "ATGTATTTACGACCAGACGAGGTGGCGCGCGTACTTGAAAAAGTCGGTTTTACTGTCGATGTGGTAACCCAGAAAGCGTATGGTTACCGCCGTGGGGAAAATTATGTCTATGTTAATCGCGAAGCGCGAATGGGACGTACCGCTCTGGTAATTCATCCAACATTAAAAGAACGCAGTTCGACACTGGCTGAACCCGCTTCCGATATTAAAACTTGCGATCATTACCAGCAATTTCCGCTCTATTTAGCAGGCGAGCGACACGAGCATTACGGTATCCCGCATGGCTTTAGTTCGCGTGTTGCGCTTGAACGTTATTTGAATGGTTTATTTGGCGAAGCCAGTTAA", + "dna_sequence_length": 345, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2640", + "location": [ + [ + "NC_000913", + 2799994, + "-", + 345 + ] + ], + "md5": "da762412b0a503ea2a38879d6e7e6eea", + "parent_gene": "", + "protein_md5": "4c50622d1f0d6d6c99358eb8ce0a5eb9", + "protein_translation": "MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008799" + ], + [ + "gene_synonym", + "ECK2666" + ], + [ + "gene_synonym", + "EcoGene:EG13285" + ], + [ + "gene_synonym", + "GI:459201372" + ], + [ + "gene_synonym", + "GeneID:947157" + ], + [ + "gene_synonym", + "JW2647" + ], + [ + "gene_synonym", + "NP_417158.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADQ7" + ], + [ + "gene_synonym", + "b2672" + ], + [ + "gene_synonym", + "ygaM" + ] + ], + "dna_sequence": "ATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAATGATGTCAATCAATTAGCTGACAGCCTCGAATCTGTATTGAAGTCCTGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAG", + "dna_sequence_length": 330, + "functions": [ + "putative membrane-anchored DUF883 family ribosome-binding protein" + ], + "id": "CDS_2641", + "location": [ + [ + "NC_000913", + 2800146, + "+", + 330 + ] + ], + "md5": "96f326912bf920ad0036881c1c6c529d", + "parent_gene": "", + "protein_md5": "88dafdd2f1e6b9926ee59fd6763d3056", + "protein_translation": "MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008802" + ], + [ + "gene_synonym", + "ECK2667" + ], + [ + "gene_synonym", + "EcoGene:EG13286" + ], + [ + "gene_synonym", + "GI:16130587" + ], + [ + "gene_synonym", + "GeneID:947161" + ], + [ + "gene_synonym", + "JW2648" + ], + [ + "gene_synonym", + "NP_417159.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC65" + ], + [ + "gene_synonym", + "b2673" + ], + [ + "gene_synonym", + "nrdH" + ], + [ + "gene_synonym", + "ygaN" + ] + ], + "dna_sequence": "ATGCGCATTACTATTTACACTCGTAACGATTGCGTTCAGTGCCACGCCACCAAACGGGCGATGGAAAACCGGGGCTTTGATTTTGAAATGATTAATGTCGATCGCGTTCCTGAAGCGGCAGAAGCGTTGCGTGCTCAGGGCTTTCGTCAGTTGCCGGTAGTGATTGCTGGCGATCTTAGCTGGTCTGGTTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGA", + "dna_sequence_length": 246, + "functions": [ + "hydrogen donor for NrdEF electron transport system", + "glutaredoxin-like protein" + ], + "id": "CDS_2642", + "location": [ + [ + "NC_000913", + 2800723, + "+", + 246 + ] + ], + "md5": "8d8d94c91395f2c05c0d66b776f4e184", + "parent_gene": "", + "protein_md5": "769ae15e7d32e4f9c4bfe2c535bf870f", + "protein_translation": "MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008804" + ], + [ + "gene_synonym", + "ECK2668" + ], + [ + "gene_synonym", + "EcoGene:EG13287" + ], + [ + "gene_synonym", + "GI:16130588" + ], + [ + "gene_synonym", + "GeneID:947158" + ], + [ + "gene_synonym", + "JW2649" + ], + [ + "gene_synonym", + "NP_417160.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A772" + ], + [ + "gene_synonym", + "b2674" + ], + [ + "gene_synonym", + "nrdI" + ], + [ + "gene_synonym", + "ygaO" + ] + ], + "dna_sequence": "ATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGATGTGATTGCCCGGAAATGCGGCGTGCCGTGGCTGTACCGTTTTGAACTCATGGGTACGCAAAGCGATATCGAAAACGTTCGTAAAGGAGTAACCGAATTTTGGCAACGACAACCGCAGAATGCCTGA", + "dna_sequence_length": 411, + "functions": [ + "NrdEF cluster assembly flavodoxin" + ], + "id": "CDS_2643", + "location": [ + [ + "NC_000913", + 2800965, + "+", + 411 + ] + ], + "md5": "18af8471f5bf0032e134bb0b45dc1fa1", + "parent_gene": "", + "protein_md5": "a29f59ebafce7e0553309b9794d32327", + "protein_translation": "MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008806" + ], + [ + "gene_synonym", + "ECK2669" + ], + [ + "gene_synonym", + "EcoGene:EG20257" + ], + [ + "gene_synonym", + "GI:16130589" + ], + [ + "gene_synonym", + "GeneID:947155" + ], + [ + "gene_synonym", + "JW2650" + ], + [ + "gene_synonym", + "NP_417161.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39452" + ], + [ + "gene_synonym", + "b2675" + ], + [ + "gene_synonym", + "nrdE" + ] + ], + "dna_sequence": "TTGGCAACGACAACCGCAGAATGCCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCGAGTAACGATGGTGGCGCTGACGCTGGCACAAGGCGATGAGACGCTGGCGTTGCAACTGACCGATGAAATGCTGTCAGGACGCTTTCAGCCAGCCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCGTAGCATTTTTGCTGTCGAATCTGCGAGAAGCGGGCGCGCCAATTAAACGTATTGAAAATCAATCTTCTGGCGTAATTCCGGTGATGAAAATGCTGGAAGACGCATTTTCCTATGCCAACCAACTCGGCGCTCGTCAGGGGGCTGGTGCAGTCTATTTACATGCTCATCATCCCGATATTCTGCGTTTTCTCGACACGAAACGGGAAAATGCCGACGAAAAAATCCGCATTAAAACACTGTCGCTTGGCGTGGTGATCCCGGATATCACTTTCCATCTGGCAAAAGAGAATGCGCAGATGGCGCTGTTTTCGCCTTATGACGTAGAGCGAGTTTATGGCAAGCCGTTTGCCGATGTGGCCATCAGCCAACACTATGACGAACTGGTTGCCGATGAACGCATTCGCAAAAAATACCTCAACGCCCGTGATTTCTTCCAGCGACTGGCAGAAATCCAGTTTGAGTCCGGCTATCCCTACATCATGTATGAAGACACGGTAAACCGTGCTAACCCTATCGCCGGGCGCATAAATATGAGTAATCTCTGCTCAGAAATTTTGCAGGTTAACAGCGCCTCAGAGTATGACGAGAATCTCGACTATACCCGCACAGGCCATGATATTTCCTGCAATTTAGGTTCGTTGAATATTGCGCACACCATGGATTCCCCCGATTTTGCCCGCACGGTAGAGACTGCCGTGCGCGGTTTAACGGCAGTATCAGATATGAGTCATATCCGCAGCGTGCCGTCCATCGAAGCCGGAAATGCCGCCTCGCACGCCATCGGACTGGGGCAGATGAATTTACACGGCTATCTGGCGCGAGAAGGCATCGCTTATGGTTCGCCGGAAGCACTGGATTTCACCAATCTCTATTTCTATGCCATCACCTGGCATGCACTGCGTACCTCGATGTTGCTGGCACGCGAACGCGGTGAAACCTTCGCCGGGTTCAAACAGTCACGCTATGCCAGTGGTGAATATTTTAGCCAATATCTGCAAGGGAACTGGCAGCCGAAAACGGCGAAAGTTGGCGAACTGTTTACCCGTAGCGGTATTACGTTACCTACCCGTGAGATGTGGGCGCAGCTGCGCGACGACGTGATGCGCTACGGCATATACAACCAGAATCTTCAGGCGGTGCCGCCAACCGGTTCTATCTCTTATATCAACCATGCTACGTCGAGTATTCATCCGATTGTGGCGAAAGTAGAGATACGCAAAGAGGGCAAAACAGGACGCGTTTACTACCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCTTTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAA", + "dna_sequence_length": 2145, + "functions": [ + "ribonucleoside-diphosphate reductase 2, alpha subunit" + ], + "id": "CDS_2644", + "location": [ + [ + "NC_000913", + 2801348, + "+", + 2145 + ] + ], + "md5": "2b096a5a97b4193e6ab91e2e81b195dc", + "parent_gene": "", + "protein_md5": "8f67e23b121295d075cc56c8858a5c5a", + "protein_translation": "MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL", + "protein_translation_length": 714, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008808" + ], + [ + "gene_synonym", + "ECK2670" + ], + [ + "gene_synonym", + "EcoGene:EG12381" + ], + [ + "gene_synonym", + "GI:16130590" + ], + [ + "gene_synonym", + "GeneID:947149" + ], + [ + "gene_synonym", + "JW2651" + ], + [ + "gene_synonym", + "NP_417162.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37146" + ], + [ + "gene_synonym", + "b2676" + ], + [ + "gene_synonym", + "nrdF" + ], + [ + "gene_synonym", + "ygaD" + ] + ], + "dna_sequence": "ATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATATTCCTGCCTGGCAGACATTAACTGTCGTAGAACAACAACTGACGATGCGCGTTTTTACTGGCCTGACGCTGCTCGACACGCTGCAAAATGTTATCGGCGCGCCTTCTCTGATGCCCGATGCACTCACGCCTCATGAAGAAGCGGTATTATCGAATATCAGCTTTATGGAAGCGGTTCATGCCCGCTCTTACAGTTCGATTTTCTCGACGCTATGCCAGACCAAAGATGTCGATGCCGCCTACGCCTGGAGTGAAGAAAACGCACCGTTGCAGCGAAAAGCTCAGATTATTCAGCAACATTATCGCGGTGATGATCCGCTGAAAAAGAAAATCGCCAGTGTGTTTCTTGAATCTTTTTTGTTCTATTCCGGTTTCTGGCTGCCGATGTATTTTTCCAGCCGCGGAAAGCTGACCAATACCGCGGACCTGATCCGTCTGATTATCCGCGATGAAGCAGTCCACGGTTACTACATAGGCTATAAATATCAGAAAAACATGGAAAAGATATCTCTGGGACAACGTGAAGAGTTGAAGAGTTTCGCCTTCGATTTGTTGCTGGAACTCTACGACAACGAGTTGCAATACACCGATGAGCTGTACGCCGAAACCCCGTGGGCTGACGATGTGAAAGCGTTTCTCTGTTACAACGCCAATAAGGCTTTGATGAATCTGGGCTACGAACCGTTATTTCCCGCAGAAATGGCGGAAGTGAATCCGGCAATCCTCGCCGCGCTTTCGCCGAATGCCGATGAAAATCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGA", + "dna_sequence_length": 960, + "functions": [ + "ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein" + ], + "id": "CDS_2645", + "location": [ + [ + "NC_000913", + 2803502, + "+", + 960 + ] + ], + "md5": "a5ddfd27fbbff075f681be44042d04a7", + "parent_gene": "", + "protein_md5": "d30c3989e5aaef4ce73878a434b0de67", + "protein_translation": "MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008814" + ], + [ + "gene_synonym", + "ECK2671" + ], + [ + "gene_synonym", + "EcoGene:EG10771" + ], + [ + "gene_synonym", + "GI:16130591" + ], + [ + "gene_synonym", + "GeneID:947148" + ], + [ + "gene_synonym", + "JW2652" + ], + [ + "gene_synonym", + "NP_417163.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14175" + ], + [ + "gene_synonym", + "b2677" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "proV" + ] + ], + "dna_sequence": "ATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAAAATATCCGACGCCGAACTCCGTGAGGTGCGCAGAAAAAAGATTGCGATGGTCTTCCAGTCCTTTGCCTTAATGCCGCATATGACCGTGCTGGACAATACTGCGTTCGGTATGGAATTGGCCGGAATTAATGCCGAAGAACGCCGGGAAAAAGCCCTTGATGCACTGCGTCAGGTCGGGCTGGAAAATTATGCCCACAGCTACCCGGATGAACTCTCTGGCGGGATGCGTCAACGTGTGGGATTAGCCCGCGCGTTAGCGATTAATCCGGATATATTATTAATGGACGAAGCCTTCTCGGCGCTCGATCCATTAATTCGCACCGAGATGCAGGATGAGCTGGTAAAATTACAGGCGAAACATCAGCGCACCATTGTCTTTATTTCCCACGATCTTGATGAAGCCATGCGTATTGGCGACCGAATTGCCATTATGCAAAATGGTGAAGTGGTACAGGTCGGCACACCGGATGAAATTCTCAATAATCCGGCGAATGATTATGTCCGTACCTTCTTCCGTGGCGTTGATATTAGTCAGGTATTCAGTGCGAAAGATATTGCCCGCCGGACACCGAATGGCTTAATTCGTAAAACCCCTGGCTTCGGCCCACGTTCGGCACTGAAATTATTGCAGGATGAAGATCGCGAATATGGCTACGTTATCGAACGCGGTAATAAGTTTGTCGGCGCAGTCTCCATCGATTCGCTTAAAACCGCGTTAACGCAGCAGCAAGGTCTTGATGCGGCGCTGATTGATGCGCCGTTAGCAGTCGATGCACAAACGCCTCTTAGCGAGTTGCTCTCTCATGTCGGACAGGCACCCTGTGCGGTGCCCGTGGTCGACGAGGACCAACAGTATGTCGGCATCATTTCGAAAGGAATGCTGCTGCGCGCTTTAGATCGTGAGGGGGTAAATAATGGCTGA", + "dna_sequence_length": 1203, + "functions": [ + "glycine betaine/proline ABC transporter periplasmic binding protein" + ], + "id": "CDS_2646", + "location": [ + [ + "NC_000913", + 2804815, + "+", + 1203 + ] + ], + "md5": "b2b70eb39d8eeafeac59960cdd7cea34", + "parent_gene": "", + "protein_md5": "e726725ff59b4c2e0e1293fc2ea83fbb", + "protein_translation": "MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGVNNG", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008816" + ], + [ + "gene_synonym", + "ECK2672" + ], + [ + "gene_synonym", + "EcoGene:EG10772" + ], + [ + "gene_synonym", + "GI:16130592" + ], + [ + "gene_synonym", + "GeneID:947145" + ], + [ + "gene_synonym", + "JW2653" + ], + [ + "gene_synonym", + "NP_417164.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14176" + ], + [ + "gene_synonym", + "b2678" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "proW" + ] + ], + "dna_sequence": "ATGGCTGATCAAAATAATCCGTGGGATACCACGCCAGCGGCGGACAGTGCCGCGCAATCCGCAGACGCCTGGGGTACACCGACGACTGCACCGACTGACGGCGGTGGTGCTGACTGGCTGACCAGTACGCCTGCGCCAAACGTCGAGCATTTTAATATTCTCGATCCGTTCCATAAAACGCTGATCCCGCTCGACAGTTGGGTCACTGAAGGGATCGACTGGGTCGTTACCCATTTCCGTCCCGTCTTCCAGGGCGTGCGCGTTCCGGTTGATTATATCCTCAACGGTTTCCAGCAATTGCTGCTGGGTATGCCCGCACCGGTGGCGATTATCGTTTTCGCTCTCATCGCCTGGCAGATTTCCGGGGTCGGAATGGGTGTGGCGACGCTGGTTTCGCTGATTGCCATCGGCGCAATCGGTGCCTGGTCGCAGGCAATGGTGACTCTGGCGCTGGTGTTAACCGCCCTGCTGTTCTGTATCGTCATCGGTTTGCCGTTGGGGATATGGCTGGCGAGAAGTCCGCGAGCGGCGAAAATTATTCGTCCACTGCTTGATGCCATGCAGACCACGCCAGCGTTTGTTTATCTGGTGCCAATCGTCATGCTATTTGGTATCGGTAACGTGCCGGGCGTGGTGGTGACGATCATCTTTGCTCTGCCGCCGATTATCCGTCTGACCATTCTGGGGATTAACCAGGTTCCGGCGGATCTGATTGAAGCCTCGCGCTCATTCGGTGCCAGCCCGCGCCAGATGCTGTTCAAAGTTCAGTTACCGCTGGCGATGCCGACCATTATGGCGGGCGTTAACCAGACGCTGATGCTGGCCCTTTCTATGGTGGTCATCGCCTCGATGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAA", + "dna_sequence_length": 1065, + "functions": [ + "glycine betaine/proline ABC transporter permease" + ], + "id": "CDS_2647", + "location": [ + [ + "NC_000913", + 2806010, + "+", + 1065 + ] + ], + "md5": "4768db9e411132aea99f1c0e0fddc494", + "parent_gene": "", + "protein_md5": "34b1ad9278660782fe02aef695c3c6ee", + "protein_translation": "MADQNNPWDTTPAADSAAQSADAWGTPTTAPTDGGGADWLTSTPAPNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008818" + ], + [ + "gene_synonym", + "ECK2673" + ], + [ + "gene_synonym", + "EcoGene:EG10773" + ], + [ + "gene_synonym", + "GI:16130593" + ], + [ + "gene_synonym", + "GeneID:947165" + ], + [ + "gene_synonym", + "JW2654" + ], + [ + "gene_synonym", + "NP_417165.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFM2" + ], + [ + "gene_synonym", + "b2679" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "proX" + ] + ], + "dna_sequence": "ATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCGTACTGGGTGAGTAACGAACTGAAGCCGGGCAAAGATGTCGTCTGGTTGCAGGTGCCGTTCTCCGCACTGCCGGGCGATAAAAACGCCGATACCAAACTGCCGAATGGTGCGAATTATGGCTTCCCGGTCAGCACCATGCATATCGTTGCCAACAAAGCCTGGGCCGAGAAAAACCCGGCAGCAGCGAAACTGTTTGCCATTATGCAGTTGCCAGTGGCAGATATTAACGCCCAGAACGCCATTATGCATGACGGCAAAGCCTCAGAAGGCGATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAA", + "dna_sequence_length": 993, + "functions": [ + "glycine betaine/proline ABC transporter periplasmic binding protein", + "cold shock protein" + ], + "id": "CDS_2648", + "location": [ + [ + "NC_000913", + 2807132, + "+", + 993 + ] + ], + "md5": "5f05ea0bc75844202a66eb177b7aff6b", + "parent_gene": "", + "protein_md5": "f88dc9aa701cbe535d01e68eb90355ee", + "protein_translation": "MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008822" + ], + [ + "gene_synonym", + "ASAP:ABE-0008824" + ], + [ + "gene_synonym", + "ECK2674" + ], + [ + "gene_synonym", + "EcoGene:EG13527" + ], + [ + "gene_synonym", + "GeneID:2847696" + ], + [ + "gene_synonym", + "JW2655" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76628" + ], + [ + "gene_synonym", + "b2681" + ], + [ + "gene_synonym", + "ygaX" + ], + [ + "gene_synonym", + "ygaY" + ] + ], + "dna_sequence": "ATGACTAAACCTAATCATGAGCTTAGCCCGGCGCTGATCGTGCTGATGTCTATCGCCACCGGTCTGGCGGTAGCCAGTAACTATTACGCCCAGCCATTGCTCGACACCATCGCGCGTAACTTTTCCCTTTCCGCCAGTTCGGCAGGCTTTATTGTTACCGCCGCGCAGTTGGGCTATGCCGCAGGTCTACTGTTTCTTGTTCCCCTCGGTGATATGTTTGAACGCCGCCGCCTGATTGTCTCGATGACCTTACTGGCGGCAGGCGGCATGTTGATTACCGCCAGCAGTCAGTCGCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAAACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCGGCGGCTGGCGCACCGTCTTTTGGGTTGCTTCGGTGTTAATGGCACTGATGGCGCTGGCATTATGGCGTGGTCTGCCACAAATGAAATCAGAAACCCACCTCAACTACCCACAGTTGTTGGGTTCCGTTTTCAGTATGTTTATCAGCGATAAAATTCTGCGTACCCGCGCGTTGCTGGGCTGCCTGACCTTTGCCAATTTCAGCATTCTCTGGACCTCAATGGCCTTTTTGCTTGCCGCTCCACCTTTTAACTACAGCGATGGTGTCATTGGTCTGTTTGGACTTGCGGGAGCTGCCGGAGCGTTGGGCGCTCGTCCGGCGGGCGGTTTTGCCGATAAGGGCAAATCGCACCACACCACAACTTTCGGTCTGCTGCTGCTATTACTTTCATGGCTGGCGATCTGGTTTGGTCACACTTCCGTACTGGCGTTGATTATCGGAATCCTGGTGCTGGATCTCACCGTGCAGGGCGTGCATATCACTAACCAGACGGTAATTTATCGGATACATCCTGATGCGCGCAATCGCCTGACCGCAGGTTACATGACTAGCTACTTTATTGGCGGTGCCGCCGGTTCGCTAATTTCAGCCTCAGCCTGGCAACATGGCGGTTGGGCTGGCGTTTGTCTGGCTGGCGCGACGATTGCCCTGGTTAACTTACTGGTCTGGTGGCGAGGTTTTCATCGTCAGGAAGCCGCAAATTAA", + "dna_sequence_length": 1185, + "id": "CDS_2649", + "location": [ + [ + "NC_000913", + 2808316, + "+", + 261 + ], + [ + "NC_000913", + 2808570, + "+", + 924 + ] + ], + "md5": "9d4b1ea3544d58a9a5e59433bb8d15af", + "parent_gene": "", + "protein_md5": "370b5e5a8e060f91f863c8b4d7bbca63", + "protein_translation": "MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008829" + ], + [ + "gene_synonym", + "ECK2676" + ], + [ + "gene_synonym", + "EcoGene:EG13528" + ], + [ + "gene_synonym", + "GI:16130594" + ], + [ + "gene_synonym", + "GeneID:945093" + ], + [ + "gene_synonym", + "JW2657" + ], + [ + "gene_synonym", + "NP_417167.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76630" + ], + [ + "gene_synonym", + "b2682" + ], + [ + "gene_synonym", + "ygaZ" + ] + ], + "dna_sequence": "ATGGAAAGCCCTACTCCACAGCCTGCTCCTGGTTCGGCGACCTTCATGGAAGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTCATGGCAATGGATGTTCGCCATGTGTTGTATGGCCCGTCACTGCGTAGCCGTATTATTCAGCGTCTGCAAAAATCGAAAACCGCCCTGTGGGCGTTTGGCCTGACGGATGAGGTTTTTGCCGCCGCAACCGCAAAACTGGTACGCAATAATCGCCGCTGGAGCGAGAACTGGATGATCGGCATTGCCTTCAGTTCATGGTCATCGTGGGTATTTGGTACGGTAATAGGGGCATTCTCCGGCAGCGGCTTGCTGCAAGGTTATCCCGCCGTTGAAGCTGCATTAGGTTTTATGCTTCCGGCACTCTTTATGAGTTTCCTGCTCGCCTCTTTCCAGCGCAAACAATCTCTTTGCGTTACCGCAGCGTTAGTTGGTGCCCTTGCAGGCGTAACGCTATTTTCTATTCCCGTCGCCATTCTGGCAGGCATTGTCTGTGGCTGCCTCACTGCGTTAATCCAGGCATTCTGGCAAGGAGCGCCCGATGAGCTATGA", + "dna_sequence_length": 738, + "functions": [ + "putative L-valine exporter, norvaline resistance protein" + ], + "id": "CDS_2650", + "location": [ + [ + "NC_000913", + 2809617, + "+", + 738 + ] + ], + "md5": "348f5329c17959634e2a8c4bca1f109b", + "parent_gene": "", + "protein_md5": "97aeff5a7ac48c263c9c3432825a6690", + "protein_translation": "MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAGASQFVITAMLAAGSSLWIAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCLTALIQAFWQGAPDEL", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008831" + ], + [ + "gene_synonym", + "ECK2677" + ], + [ + "gene_synonym", + "EcoGene:EG12940" + ], + [ + "gene_synonym", + "GI:16130595" + ], + [ + "gene_synonym", + "GeneID:945111" + ], + [ + "gene_synonym", + "JW2658" + ], + [ + "gene_synonym", + "NP_417168.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43667" + ], + [ + "gene_synonym", + "b2683" + ], + [ + "gene_synonym", + "ygaH" + ] + ], + "dna_sequence": "ATGAGCTATGAGGTTCTGCTGCTTGGGTTACTAGTTGGCGTGGCGAATTATTGCTTCCGCTATTTGCCGCTGCGCCTGCGTGTGGGTAATGCCCGCCCAACCAAACGTGGCGCGGTAGGTATTTTGCTCGACACCATTGGCATCGCCTCGATATGCGCTCTGCTGGTTGTCTCTACCGCACCAGAAGTGATGCACGATACACGCCGTTTCGTGCCCACGCTGGTCGGCTTCGCGGTACTGGGTGCCAGTTTCTATAAAACACGCAGCATTATCATCCCAACACTGCTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAA", + "dna_sequence_length": 336, + "functions": [ + "putative L-valine exporter, norvaline resistance protein" + ], + "id": "CDS_2651", + "location": [ + [ + "NC_000913", + 2810344, + "+", + 336 + ] + ], + "md5": "f1fc3993e938d8785a5cb5a67a1f098b", + "parent_gene": "", + "protein_md5": "2507a4ab2af9a92caef50a67e98a1a9e", + "protein_translation": "MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008834" + ], + [ + "gene_synonym", + "ECK2678" + ], + [ + "gene_synonym", + "EcoGene:EG10603" + ], + [ + "gene_synonym", + "GI:16130596" + ], + [ + "gene_synonym", + "GeneID:945282" + ], + [ + "gene_synonym", + "JW2659" + ], + [ + "gene_synonym", + "NP_417169.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACR9" + ], + [ + "gene_synonym", + "b2684" + ], + [ + "gene_synonym", + "emrR" + ], + [ + "gene_synonym", + "mprA" + ] + ], + "dna_sequence": "ATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGAGTTTTTGCGCGAGGTTTTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAA", + "dna_sequence_length": 531, + "functions": [ + "transcriptional repressor of microcin B17 synthesis and multidrug efflux" + ], + "id": "CDS_2652", + "location": [ + [ + "NC_000913", + 2810770, + "+", + 531 + ] + ], + "md5": "5b38a7ff45ddb3e35c65ce2eeb082bba", + "parent_gene": "", + "protein_md5": "64bea006ef1b176c4639c5dd6c38a563", + "protein_translation": "MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008838" + ], + [ + "gene_synonym", + "ECK2679" + ], + [ + "gene_synonym", + "EcoGene:EG11354" + ], + [ + "gene_synonym", + "GI:16130597" + ], + [ + "gene_synonym", + "GeneID:947166" + ], + [ + "gene_synonym", + "JW2660" + ], + [ + "gene_synonym", + "NP_417170.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27303" + ], + [ + "gene_synonym", + "b2685" + ], + [ + "gene_synonym", + "emrA" + ] + ], + "dna_sequence": "ATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTTCTCACCTTGCTCTTTATAATTATTGCCGTAGCGATAGGGATTTATTGGTTTTTGGTACTGCGTCACTTCGAAGAAACCGATGACGCATACGTGGCAGGGAATCAAATTCAAATTATGTCTCAGGTGTCTGGCAGCGTGACGAAAGTCTGGGCCGATAACACCGATTTTGTAAAAGAAGGCGACGTGCTGGTCACTCTCGACCCGACAGATGCTCGCCAGGCGTTTGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAACGACGCCGCTGATGGCGGTCGTTCCAGCCACCAATATGTGGGTGGATGCCAACTTTAAAGAGACGCAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGTAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGTACGTTCCACTCCGGTAGCGGTAAGCACCGCGCGTGAAATCAGCCTGGCACCTGTCAATAAACTGATCGACGATATCGTAAAAGCTAACGCTGGCTAA", + "dna_sequence_length": 1173, + "functions": [ + "multidrug efflux system" + ], + "id": "CDS_2653", + "location": [ + [ + "NC_000913", + 2811427, + "+", + 1173 + ] + ], + "md5": "c6101f9dcdf5873eb5644c6a45ff0010", + "parent_gene": "", + "protein_md5": "5976bc202774a6addd5b30b7feebb517", + "protein_translation": "MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG", + "protein_translation_length": 390, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008840" + ], + [ + "gene_synonym", + "ECK2680" + ], + [ + "gene_synonym", + "EcoGene:EG11439" + ], + [ + "gene_synonym", + "GI:16130598" + ], + [ + "gene_synonym", + "GeneID:947167" + ], + [ + "gene_synonym", + "JW2661" + ], + [ + "gene_synonym", + "NP_417171.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEJ0" + ], + [ + "gene_synonym", + "b2686" + ], + [ + "gene_synonym", + "emrB" + ] + ], + "dna_sequence": "ATGCAACAGCAAAAACCGCTGGAAGGCGCGCAACTGGTCATTATGACGATTGCGCTGTCACTGGCGACATTCATGCAGGTGCTGGACTCCACCATTGCTAACGTGGCGATCCCCACTATCGCCGGGAATCTGGGCTCATCGCTCAGCCAGGGAACGTGGGTAATCACTTCTTTCGGGGTGGCGAATGCCATCTCGATCCCGCTTACCGGCTGGCTGGCAAAGCGCGTCGGGGAAGTGAAACTGTTCCTTTGGTCCACCATCGCCTTTGCTATTGCGTCGTGGGCGTGTGGTGTCTCCAGCAGCCTGAATATGCTGATCTTCTTCCGCGTGATTCAGGGGATTGTCGCCGGGCCGTTGATCCCGCTTTCGCAAAGTCTATTGCTGAATAACTACCCGCCAGCCAAACGCTCGATCGCGCTGGCGTTGTGGTCGATGACGGTGATTGTCGCGCCAATTTGCGGCCCGATCCTCGGCGGTTATATCAGCGATAATTACCACTGGGGCTGGATATTCTTCATCAACGTGCCGATTGGCGTGGCGGTGGTGTTGATGACACTGCAAACTCTGCGCGGACGTGAAACCCGCACCGAACGGCGGCGGATTGATGCCGTGGGGCTGGCACTGCTGGTTATTGGTATCGGCAGCCTGCAGATTATGCTCGACCGCGGTAAAGAGCTGGACTGGTTTTCATCACAGGAAATTATCATCCTTACCGTGGTGGCGGTGGTGGCTATCTGCTTCCTGATTGTCTGGGAGCTGACCGACGATAACCCGATAGTCGATCTGTCGTTGTTTAAGTCGCGCAACTTCACCATCGGCTGCTTGTGTATCAGCCTCGCGTATATGCTCTACTTCGGCGCTATTGTTCTGCTGCCGCAGTTGTTGCAGGAGGTCTACGGTTACACGGCGACCTGGGCAGGTTTGGCCTCTGCGCCGGTAGGGATTATTCCGGTGATCCTGTCGCCGATTATCGGCCGCTTCGCGCATAAACTGGATATGCGGCGGCTGGTAACCTTCAGCTTTATTATGTATGCCGTCTGCTTCTACTGGCGTGCCTATACCTTTGAACCAGGTATGGATTTTGGCGCGTCGGCCTGGCCGCAGTTTATCCAGGGGTTTGCGGTGGCCTGCTTCTTTATGCCGCTGACCACCATTACGCTGTCTGGTTTGCCACCGGAACGACTGGCGGCGGCATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCACCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAA", + "dna_sequence_length": 1539, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_2654", + "location": [ + [ + "NC_000913", + 2812616, + "+", + 1539 + ] + ], + "md5": "25eb81b151488979185473a220b4fb5c", + "parent_gene": "", + "protein_md5": "29920038b47c3570580a45919f232718", + "protein_translation": "MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGGGGAH", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008842" + ], + [ + "gene_synonym", + "ECK2681" + ], + [ + "gene_synonym", + "EcoGene:EG12712" + ], + [ + "gene_synonym", + "GI:16130599" + ], + [ + "gene_synonym", + "GeneID:947168" + ], + [ + "gene_synonym", + "JW2662" + ], + [ + "gene_synonym", + "NP_417172.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45578" + ], + [ + "gene_synonym", + "b2687" + ], + [ + "gene_synonym", + "luxS" + ], + [ + "gene_synonym", + "ygaG" + ] + ], + "dna_sequence": "ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACACCCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCCATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCAATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGCAATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGCACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCACTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG", + "dna_sequence_length": 516, + "functions": [ + "S-ribosylhomocysteine lyase" + ], + "id": "CDS_2655", + "location": [ + [ + "NC_000913", + 2814733, + "-", + 516 + ] + ], + "md5": "bd81874366e57b86462089999e23dd3a", + "parent_gene": "", + "protein_md5": "9e01ce4838b08bee8178f00a8b68ada0", + "protein_translation": "MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008845" + ], + [ + "gene_synonym", + "ECK2683" + ], + [ + "gene_synonym", + "EcoGene:EG10418" + ], + [ + "gene_synonym", + "GI:16130600" + ], + [ + "gene_synonym", + "GeneID:944881" + ], + [ + "gene_synonym", + "JW2663" + ], + [ + "gene_synonym", + "NP_417173.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W9" + ], + [ + "gene_synonym", + "b2688" + ], + [ + "gene_synonym", + "gshA" + ], + [ + "gene_synonym", + "gshI" + ] + ], + "dna_sequence": "TTGATCCCGGACGTATCACAGGCGCTGGCCTGGCTGGAAAAACATCCTCAGGCGTTAAAGGGGATACAGCGTGGGCTGGAGCGCGAAACTTTGCGTGTTAATGCTGATGGCACACTGGCAACAACAGGTCATCCTGAAGCATTAGGTTCCGCACTGACGCACAAATGGATTACTACCGATTTTGCGGAAGCATTGCTGGAATTCATTACACCAGTGGATGGTGATATTGAACATATGCTGACCTTTATGCGCGATCTGCATCGTTATACGGCGCGCAATATGGGCGATGAGCGGATGTGGCCGTTAAGTATGCCATGCTACATCGCAGAAGGTCAGGACATCGAACTGGCACAGTACGGCACTTCTAACACCGGACGCTTTAAAACGCTGTATCGTGAAGGGCTGAAAAATCGCTACGGCGCGCTGATGCAAACCATTTCCGGCGTGCACTACAATTTCTCTTTGCCAATGGCATTCTGGCAAGCGAAGTGCGGTGATATCTCGGGCGCTGATGCCAAAGAGAAAATTTCTGCGGGCTATTTCCGCGTTATCCGCAATTACTATCGTTTCGGTTGGGTCATTCCTTATCTGTTTGGTGCATCTCCGGCGATTTGTTCTTCTTTCCTGCAAGGAAAACCAACGTCGCTGCCGTTTGAGAAAACCGAGTGCGGTATGTATTACCTGCCGTATGCGACCTCTCTTCGTTTGAGCGATCTCGGCTATACCAATAAATCGCAAAGCAATCTTGGTATTACCTTCAACGATCTTTACGAGTACGTAGCGGGCCTTAAACAGGCAATCAAAACGCCATCGGAAGAGTACGCGAAGATTGGTATTGAGAAAGACGGTAAGAGGCTGCAAATCAACAGCAACGTGTTGCAGATTGAAAACGAACTGTACGCGCCGATTCGTCCAAAACGCGTTACCCGCAGCGGCGAGTCGCCTTCTGATGCGCTGTTACGTGGCGGCATTGAATATATTGAAGTGCGTTCGCTGGACATCAACCCGTTCTCGCCGATTGGTGTAGATGAACAGCAGGTGCGATTCCTCGACCTGTTTATGGTCTGGTGTGCGCTGGCTGATGCACCGGAAATGAGCAGTAGCGAACTTGCCTGTACACGCGTTAACTGGAACCGGGTGATCCTCGAAGGTCGCAAACCGGGTCTGACGCTGGGTATCGGCTGCGAAACCGCACAGTTCCCGTTACCGCAGGTGGGTAAAGATCTGTTCCGCGATCTGAAACGCGTCGCGCAAACGCTGGATAGTATTAACGGCGGCGAAGCGTATCAGAAAGTGTGTGATGAACTGGTTGCCTGCTTCGATAATCCCGATCTGACTTTCTCTGCCCGTATCTTAAGGTCTATGATTGATACTGGTATTGGCGGAACAGGCAAAGCATTTGCAGAAGCCTACCGTAATCTGCTGCGTGAAGAGCCGCTGGAAATTCTGCGCGAAGAGGATTTTGTAGCCGAGCGCGAGGCGTCTGAACGCCGTCAGCAGGAAATGGAAGCCGCTGATACCGAACCGTTTGCGGTGTGGCTGGAAAAACACGCCTGA", + "dna_sequence_length": 1557, + "functions": [ + "glutamate-cysteine ligase" + ], + "id": "CDS_2656", + "location": [ + [ + "NC_000913", + 2816439, + "-", + 1557 + ] + ], + "md5": "84736ab56357366039fe606bca511df4", + "parent_gene": "", + "protein_md5": "89cccdf260e0f41f45e5960f73e90682", + "protein_translation": "MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPFEKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSARILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMEAADTEPFAVWLEKHA", + "protein_translation_length": 518, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008847" + ], + [ + "gene_synonym", + "ECK2684" + ], + [ + "gene_synonym", + "EcoGene:EG13529" + ], + [ + "gene_synonym", + "GI:16130601" + ], + [ + "gene_synonym", + "GeneID:945419" + ], + [ + "gene_synonym", + "JW2664" + ], + [ + "gene_synonym", + "NP_417174.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADR0" + ], + [ + "gene_synonym", + "b2689" + ], + [ + "gene_synonym", + "yqaA" + ] + ], + "dna_sequence": "GTGAGTGAAGCGTTATCGCTTTTCTCGTTGTTTGCCAGTAGTTTTCTCAGCGCTACACTATTACCCGGCAACTCCGAAGTCGTGCTGGTGGCAATGTTGCTTTCCGGGATCAGTCATCCCTGGGTTTTAGTTTTAACAGCAACAATGGGTAATAGCCTTGGAGGGTTAACTAACGTTATCCTTGGGCGTTTCTTTCCATTGCGTAAAACATCGCGCTGGCAAGAGAAAGCTACCGGCTGGCTGAAACGCTATGGTGCAGTCACGCTATTATTAAGCTGGATGCCCGTGGTTGGCGATTTACTGTGTCTGTTAGCGGGATGGATGCGCATCTCGTGGGGACCGGTAATCTTTTTTTTGTGCCTTGGTAAAGCGTTACGCTATGTTGCAGTTGCAGCAGCGACCGTTCAGGGCATGATGTGGTGGCACTAA", + "dna_sequence_length": 429, + "functions": [ + "COG1238 family inner membrane protein" + ], + "id": "CDS_2657", + "location": [ + [ + "NC_000913", + 2816940, + "-", + 429 + ] + ], + "md5": "d13db9f97849614d0c23432740f721c0", + "parent_gene": "", + "protein_md5": "7bae19524ca5570aea882a5a17ebed33", + "protein_translation": "MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008850" + ], + [ + "gene_synonym", + "ECK2685" + ], + [ + "gene_synonym", + "EcoGene:EG13530" + ], + [ + "gene_synonym", + "GI:16130602" + ], + [ + "gene_synonym", + "GeneID:945776" + ], + [ + "gene_synonym", + "JW2665" + ], + [ + "gene_synonym", + "NP_417175.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77475" + ], + [ + "gene_synonym", + "b2690" + ], + [ + "gene_synonym", + "yqaB" + ] + ], + "dna_sequence": "ATGTACGAGCGTTATGCAGGTTTAATTTTTGATATGGATGGCACAATCCTGGATACGGAGCCTACGCACCGTAAAGCGTGGCGCGAAGTATTAGGGCACTACGGTCTTCAGTACGATATTCAGGCGATGATTGCGCTTAATGGATCGCCCACCTGGCGTATTGCTCAGGCAATTATTGAGCTGAATCAGGCCGATCTCGACCCGCATGCGTTAGCGCGTGAAAAAACAGAAGCAGTAAGAAGTATGCTGCTGGATAGCGTCGAACCGCTTCCTCTTGTTGATGTGGTGAAAAGTTGGCATGGTCGTCGCCCAATGGCTGTAGGAACGGGGAGTGAAAGCGCCATCGCTGAGGCATTGCTGGCGCACCTGGGATTACGCCATTATTTTGACGCCGTCGTCGCTGCCGATCACGTCAAACACCATAAACCCGCGCCAGACACATTTTTGTTGTGCGCGCAGCGTATGGGCGTGCAACCGACGCAGTGTGTGGTCTTTGAAGATGCCGATTTCGGTATTCAGGCGGCCCGTGCAGCAGGCATGGACGCCGTGGATGTTCGCTTGCTGTGA", + "dna_sequence_length": 567, + "functions": [ + "fructose-1-P and 6-phosphogluconate phosphatase" + ], + "id": "CDS_2658", + "location": [ + [ + "NC_000913", + 2817503, + "-", + 567 + ] + ], + "md5": "1fab3f75c618ff761191d68695b7a73c", + "parent_gene": "", + "protein_md5": "1a107e0316203262289f1c4569facdd5", + "protein_translation": "MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAVDVRLL", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008866" + ], + [ + "gene_synonym", + "ECK2691" + ], + [ + "gene_synonym", + "EcoGene:EG11447" + ], + [ + "gene_synonym", + "GI:16130603" + ], + [ + "gene_synonym", + "GeneID:947176" + ], + [ + "gene_synonym", + "JW2666" + ], + [ + "gene_synonym", + "NP_417176.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69913" + ], + [ + "gene_synonym", + "b2696" + ], + [ + "gene_synonym", + "csrA" + ], + [ + "gene_synonym", + "zfiA" + ] + ], + "dna_sequence": "ATGCTGATTCTGACTCGTCGAGTTGGTGAGACCCTCATGATTGGGGATGAGGTCACCGTGACAGTTTTAGGGGTAAAGGGCAACCAGGTACGTATTGGCGTAAATGCCCCGAAGGAAGTTTCTGTTCACCGTGAAGAGATCTACCAGCGTATCCAGGCTGAAAAATCCCAGCAGTCCAGTTACTAA", + "dna_sequence_length": 186, + "functions": [ + "pleiotropic regulatory protein for carbon source metabolism" + ], + "id": "CDS_2659", + "location": [ + [ + "NC_000913", + 2819146, + "-", + 186 + ] + ], + "md5": "575957ef32f45516e642e916f081e8bb", + "parent_gene": "", + "protein_md5": "fc4f077eb268a92f29017fcaaedd8fa3", + "protein_translation": "MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008869" + ], + [ + "gene_synonym", + "ECK2692" + ], + [ + "gene_synonym", + "EcoGene:EG10034" + ], + [ + "gene_synonym", + "GI:16130604" + ], + [ + "gene_synonym", + "GeneID:947175" + ], + [ + "gene_synonym", + "JW2667" + ], + [ + "gene_synonym", + "NP_417177.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00957" + ], + [ + "gene_synonym", + "act" + ], + [ + "gene_synonym", + "ala-act" + ], + [ + "gene_synonym", + "alaS" + ], + [ + "gene_synonym", + "b2697" + ], + [ + "gene_synonym", + "lovB" + ] + ], + "dna_sequence": "ATGAGCAAGAGCACCGCTGAGATCCGTCAGGCGTTTCTCGACTTTTTCCATAGTAAGGGACATCAGGTAGTTGCCAGCAGCTCCCTGGTACCCCATAACGACCCAACTTTGTTGTTTACCAACGCCGGGATGAACCAGTTCAAGGATGTGTTCCTTGGGCTCGACAAGCGTAATTATTCCCGCGCTACCACTTCCCAACGCTGCGTGCGTGCGGGTGGTAAACACAACGACCTGGAAAACGTCGGTTACACCGCGCGTCACCATACCTTCTTCGAAATGCTGGGCAACTTCAGCTTCGGCGACTATTTCAAACACGATGCCATTCAGTTTGCATGGGAACTGCTGACCAGCGAAAAATGGTTTGCCCTGCCGAAAGAGCGTCTGTGGGTTACCGTCTATGAAAGCGACGACGAAGCCTACGAAATCTGGGAAAAAGAAGTAGGGATCCCGCGCGAACGTATTATTCGCATCGGCGATAACAAAGGTGCGCCATACGCATCTGACAACTTCTGGCAGATGGGTGACACTGGTCCGTGCGGCCCGTGCACCGAAATCTTCTACGATCACGGCGACCACATTTGGGGGGGCCCTCCGGGAAGCCCGGAAGAAGACGGCGACCGCTACATTGAGATCTGGAACATCGTCTTCATGCAGTTCAACCGCCAGGCCGATGGCACGATGGAACCGCTGCCGAAGCCGTCTGTAGATACCGGTATGGGTCTGGAGCGTATTGCTGCGGTGCTGCAACACGTTAACTCTAACTATGACATCGACCTGTTCCGCACGCTGATCCAGGCGGTAGCGAAAGTCACTGGCGCAACCGATCTGAGCAATAAATCGCTGCGCGTAATCGCTGACCACATTCGTTCTTGTGCGTTCCTGATCGCGGATGGCGTAATGCCGTCCAATGAAAACCGTGGTTATGTACTGCGTCGTATCATTCGTCGCGCAGTGCGTCACGGTAATATGCTCGGCGCGAAAGAAACCTTCTTCTACAAACTGGTTGGTCCGCTGATCGACGTTATGGGCTCTGCGGGTGAAGACCTGAAACGCCAGCAGGCGCAGGTTGAGCAGGTGCTGAAGACTGAAGAAGAGCAGTTTGCTCGTACTCTGGAGCGCGGTCTGGCGTTGCTGGATGAAGAGCTGGCAAAACTTTCTGGTGATACGCTGGATGGTGAAACTGCTTTCCGTCTGTACGACACCTATGGCTTCCCGGTTGACCTGACGGCTGATGTTTGTCGTGAGCGCAACATCAAAGTTGACGAAGCTGGTTTTGAAGCTGCAATGGAAGAGCAGCGTCGTCGCGCGCGCGAAGCCAGCGGCTTTGGTGCCGATTACAACGCAATGATCCGTGTTGACAGTGCATCTGAATTTAAAGGCTATGACCATCTGGAACTGAACGGCAAAGTGACTGCGCTGTTTGTTGATGGTAAAGCGGTTGATGCCATCAATGCAGGCCAGGAAGCTGTGGTCGTGCTGGATCAAACGCCATTCTATGCGGAATCCGGCGGTCAGGTTGGCGATAAAGGCGAACTGAAAGGCGCTAACTTCTCCTTTGCGGTGGAAGATACGCAGAAATACGGCCAGGCGATTGGTCACATCGGTAAACTTGCTGCGGGTTCTCTGAAAGTGGGCGACGCGGTGCAGGCTGATGTTGATGAGGCTCGTCGCGCCCGTATTCGTCTGAATCACTCCGCAACGCACCTGATGCACGCTGCGCTGCGCCAGGTTCTGGGTACTCATGTATCGCAGAAAGGTTCACTGGTTAACGACAAGGTGCTGCGCTTCGACTTCTCACACAACGAAGCGATGAAACCAGAAGAGATTCGTGCGGTCGAAGACCTGGTGAACACACAGATTCGTCGCAATTTGCCGATCGAAACCAACATCATGGATCTCGAAGCGGCGAAAGCGAAAGGTGCGATGGCGCTGTTCGGCGAGAAGTATGATGAGCGCGTACGCGTGCTGAGCATGGGCGATTTCTCTACCGAGTTGTGTGGCGGTACTCACGCCAGCCGCACTGGTGATATTGGTCTGTTCCGCATCATCTCTGAATCGGGTACTGCTGCAGGCGTTCGTCGTATCGAAGCGGTAACCGGAGAAGGTGCTATCGCCACCGTTCATGCAGACAGCGATCGCTTAAGCGAAGTCGCGCATCTGCTGAAAGGCGATAGCAATAATCTGGCTGATAAAGTGCGCTCAGTACTGGAACGTACGCGTCAGCTGGAAAAAGAGTTACAACAGCTTAAAGAACAAGCTGCCGCACAGGAGAGCGCAAATCTTTCCAGTAAGGCAATTGATGTTAATGGTGTTAAGCTGTTGGTTAGCGAGCTTAGCGGTGTTGAGCCGAAAATGTTGCGTACCATGGTTGACGATTTAAAAAATCAGCTGGGGTCGACAATTATCGTGCTGGCAACGGTAGTCGAAGGTAAGGTTTCTCTGATTGCAGGCGTATCTAAGGACGTCACAGATCGTGTGAAAGCAGGGGAACTGATTGGTATGGTCGCTCAGCAGGTGGGCGGCAAGGGTGGTGGACGTCCTGACATGGCGCAAGCCGGTGGTACGGATGCTGCGGCCTTACCTGCAGCGTTAGCCAGTGTGAAAGGCTGGGTCAGCGCGAAATTGCAATAA", + "dna_sequence_length": 2631, + "functions": [ + "alanyl-tRNA synthetase" + ], + "id": "CDS_2660", + "location": [ + [ + "NC_000913", + 2822011, + "-", + 2631 + ] + ], + "md5": "6005c6913f039caa302abb39be62c356", + "parent_gene": "", + "protein_md5": "7e88afdd0d0a0c72076b8ed02b3c7385", + "protein_translation": "MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLGSTIIVLATVVEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ", + "protein_translation_length": 876, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008872" + ], + [ + "gene_synonym", + "ECK2693" + ], + [ + "gene_synonym", + "EcoGene:EG12080" + ], + [ + "gene_synonym", + "GI:16130605" + ], + [ + "gene_synonym", + "GeneID:947172" + ], + [ + "gene_synonym", + "JW2668" + ], + [ + "gene_synonym", + "NP_417178.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33596" + ], + [ + "gene_synonym", + "b2698" + ], + [ + "gene_synonym", + "oraA" + ], + [ + "gene_synonym", + "recX" + ] + ], + "dna_sequence": "ATGACAGAATCAACATCCCGTCGCCCGGCATATGCTCGCCTGTTGGATCGTGCGGTACGCATTCTGGCGGTGCGCGATCACAGTGAGCAAGAACTGCGACGTAAACTCGCGGCACCGATTATGGGCAAAAATGGCCCAGAAGAGATTGATGCTACGGCAGAAGATTACGAGCGCGTTATTGCCTGGTGCCATGAACATGGCTATCTCGATGACAGCCGATTTGTTGCGCGCTTTATCGCCAGCCGTAGCCGCAAAGGTTATGGACCTGCGCGTATTCGCCAGGAACTGAATCAGAAAGGTATTTCCCGCGAAGCGACAGAAAAAGCGATGCGTGAATGTGACATCGACTGGTGCGCACTGGCGCGCGATCAGGCGACGCGAAAATATGGCGAACCTTTGCCAACTGTCTTTTCAGAAAAAGTTAAGATCCAGCGTTTTCTGCTCTATCGTGGCTATCTGATGGAAGATATCCAGGAGATTTGGCGAAATTTTGCCGACTGA", + "dna_sequence_length": 501, + "functions": [ + "regulatory protein for RecA" + ], + "id": "CDS_2661", + "location": [ + [ + "NC_000913", + 2822639, + "-", + 501 + ] + ], + "md5": "71699ca22b16207059e6140d2179bcd4", + "parent_gene": "", + "protein_md5": "dbbc5589e4fed0bf83fb03dea135e004", + "protein_translation": "MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQEIWRNFAD", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008876" + ], + [ + "gene_synonym", + "ECK2694" + ], + [ + "gene_synonym", + "EcoGene:EG10823" + ], + [ + "gene_synonym", + "GI:16130606" + ], + [ + "gene_synonym", + "GeneID:947170" + ], + [ + "gene_synonym", + "JW2669" + ], + [ + "gene_synonym", + "NP_417179.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7G6" + ], + [ + "gene_synonym", + "b2699" + ], + [ + "gene_synonym", + "lexB" + ], + [ + "gene_synonym", + "recA" + ], + [ + "gene_synonym", + "recH" + ], + [ + "gene_synonym", + "rnmB" + ], + [ + "gene_synonym", + "srf" + ], + [ + "gene_synonym", + "tif" + ], + [ + "gene_synonym", + "umuB" + ], + [ + "gene_synonym", + "umuR" + ], + [ + "gene_synonym", + "zab" + ] + ], + "dna_sequence": "ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCATCATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGGCAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGCTGCAGGTGATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAAACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGGCGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATCGGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAACACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTAACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGTAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGAAGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCTACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATCGAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGATAGCGAAGGCGTAGCAGAAACTAACGAAGATTTTTAA", + "dna_sequence_length": 1062, + "functions": [ + "DNA recombination and repair protein", + "ssDNA-dependent ATPase", + "synaptase", + "ssDNA and dsDNA binding protein", + "ATP-dependent homologous DNA strand exchanger", + "recombinase A", + "LexA autocleavage cofactor" + ], + "id": "CDS_2662", + "location": [ + [ + "NC_000913", + 2823769, + "-", + 1062 + ] + ], + "md5": "5dac5509f9801a4827b91167f641468b", + "parent_gene": "", + "protein_md5": "ff9f96d7f45619daca23a25a01e0c64d", + "protein_translation": "MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF", + "protein_translation_length": 353, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008882" + ], + [ + "gene_synonym", + "ECK2695" + ], + [ + "gene_synonym", + "EcoGene:EG12698" + ], + [ + "gene_synonym", + "GI:16130607" + ], + [ + "gene_synonym", + "GeneID:947169" + ], + [ + "gene_synonym", + "JW2670" + ], + [ + "gene_synonym", + "NP_417180.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6G3" + ], + [ + "gene_synonym", + "b2700" + ], + [ + "gene_synonym", + "pncC" + ], + [ + "gene_synonym", + "ygaD" + ] + ], + "dna_sequence": "ATGACTGACAGTGAACTGATGCAGTTAAGTGAACAGGTTGGGCAGGCGCTGAAAGCCCGTGGCGCAACCGTAACAACTGCCGAGTCTTGTACCGGTGGTTGGGTAGCGAAAGTGATTACCGATATTGCCGGTAGCTCCGCCTGGTTTGAACGCGGATTTGTCACCTACAGTAACGAAGCCAAAGCGCAGATGATCGGCGTACGCGAAGAGACGCTGGCGCAGCATGGCGCGGTGAGTGAACCCGTCGTGGTGGAAATGGCGATAGGCGCACTGAAAGCGGCTCGTGCTGATTATGCCGTGTCTATTAGTGGTATCGCCGGGCCGGATGGCGGCAGTGAAGAGAAGCCTGTCGGCACCGTCTGGTTTGCTTTTGCCACTGCCCGCGGTGAAGGCATTACCCGGCGGGAATGCTTCAGCGGCGACCGTGATGCGGTGCGTCGTCAGGCTACTGCGTATGCATTGCAGACCTTGTGGCAACAATTTCTACAAAACACTTGA", + "dna_sequence_length": 498, + "functions": [ + "nicotinamide-nucleotide amidohydrolase", + "NMN amidohydrolase" + ], + "id": "CDS_2663", + "location": [ + [ + "NC_000913", + 2824346, + "-", + 498 + ] + ], + "md5": "f623b1569a165e96fa4fd2e342b993a7", + "parent_gene": "", + "protein_md5": "7b2ac6818f57078c1087def2c187a208", + "protein_translation": "MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQFLQNT", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008885" + ], + [ + "gene_synonym", + "ECK2696" + ], + [ + "gene_synonym", + "EcoGene:EG12699" + ], + [ + "gene_synonym", + "GI:16130608" + ], + [ + "gene_synonym", + "GeneID:947184" + ], + [ + "gene_synonym", + "JW2671" + ], + [ + "gene_synonym", + "NP_417181.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41052" + ], + [ + "gene_synonym", + "b2701" + ], + [ + "gene_synonym", + "mltB" + ] + ], + "dna_sequence": "ATGTTCAAGCGTCGTTATGTAACATTGCTTCCCCTTTTTGTGTTGCTTGCCGCCTGTAGCAGCAAGCCAAAACCTACTGAGACTGATACGACCACCGGAACGCCGTCTGGCGGCTTCCTGCTTGAGCCGCAGCACAATGTGATGCAGATGGGCGGCGATTTCGCTAATAACCCGAATGCCCAGCAGTTCATCGACAAAATGGTGAACAAACACGGTTTCGATCGTCAGCAGTTGCAGGAAATTCTCTCCCAGGCGAAGCGTCTGGATTCGGTACTGCGGCTGATGGATAACCAGGCACCAACCACATCGGTGAAACCGCCATCAGGTCCGAACGGCGCATGGCTCCGTTATCGCAAAAAATTTATTACGCCGGACAACGTGCAGAACGGTGTGGTTTTCTGGAATCAGTATGAAGATGCGTTGAATCGCGCGTGGCAGGTGTATGGAGTACCGCCGGAAATTATCGTCGGGATTATCGGCGTTGAAACCCGCTGGGGGCGCGTGATGGGGAAAACTCGCATCCTCGATGCGCTGGCAACGCTGTCATTTAACTACCCACGCCGCGCGGAGTATTTCTCTGGCGAGCTGGAAACCTTCCTGTTGATGGCGCGCGACGAGCAGGACGATCCGCTCAATCTGAAAGGTTCCTTTGCCGGGGCGATGGGCTACGGACAGTTTATGCCGTCGTCTTACAAACAATATGCGGTAGATTTCAGCGGCGACGGGCATATCAACCTGTGGGATCCGGTTGATGCGATCGGTAGCGTGGCGAACTATTTCAAAGCGCACGGCTGGGTGAAAGGCGATCAGGTCGCGGTAATGGCAAACGGTCAGGCTCCAGGCTTGCCAAATGGCTTCAAAACTAAGTACAGCATTTCGCAGCTTGCCGCCGCAGGTTTAACGCCACAGCAGCCGCTGGGCAACCATCAACAAGCCAGCCTGCTGCGTCTGGATGTTGGCACCGGCTACCAGTACTGGTACGGTCTGCCGAACTTCTACACCATCACCCGTTACAACCACAGCACCCATTACGCAATGGCGGTCTGGCAGTTAGGACAAGCCGTGGCGCTGGCGCGAGTACAGTAG", + "dna_sequence_length": 1086, + "functions": [ + "membrane-bound lytic murein transglycosylase B" + ], + "id": "CDS_2664", + "location": [ + [ + "NC_000913", + 2825576, + "-", + 1086 + ] + ], + "md5": "8792d819408e7eded8384c4f8fda258c", + "parent_gene": "", + "protein_md5": "c11d1ffc7edcb1f8cbb5fca7d846ee02", + "protein_translation": "MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQHNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARVQ", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008890" + ], + [ + "gene_synonym", + "ECK2697" + ], + [ + "gene_synonym", + "EcoGene:EG10969" + ], + [ + "gene_synonym", + "GI:49176260" + ], + [ + "gene_synonym", + "GeneID:947575" + ], + [ + "gene_synonym", + "JW5429" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56579" + ], + [ + "gene_synonym", + "YP_026180.1" + ], + [ + "gene_synonym", + "b2702" + ], + [ + "gene_synonym", + "gutA" + ], + [ + "gene_synonym", + "sbl" + ], + [ + "gene_synonym", + "srlA" + ] + ], + "dna_sequence": "ATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTACCTACTGTTACCGTGCATTGGCACGTTTGTCTTTTGCAATCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCATATCAACCCTGGCGAACTGTTTGTTTATCTTGGCATTGCCAGCGGTCTGACAACGCTGAACCTGCCACTTGGCCCACTGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCATTCAACTTGAACAAAAAGTTCACCTGGCAGGAGCAACATCATGA", + "dna_sequence_length": 564, + "functions": [ + "glucitol/sorbitol-specific enzyme IIC component of PTS" + ], + "id": "CDS_2665", + "location": [ + [ + "NC_000913", + 2825832, + "+", + 564 + ] + ], + "md5": "5ce716ffffc079379a3c8fddb191c42f", + "parent_gene": "", + "protein_md5": "4a70a70c7fd75c55a1af29243bd9692c", + "protein_translation": "MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLEQKVHLAGATS", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008892" + ], + [ + "gene_synonym", + "ECK2698" + ], + [ + "gene_synonym", + "EcoGene:EG14373" + ], + [ + "gene_synonym", + "GI:49176261" + ], + [ + "gene_synonym", + "GeneID:948933" + ], + [ + "gene_synonym", + "JW5430" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56580" + ], + [ + "gene_synonym", + "YP_026181.1" + ], + [ + "gene_synonym", + "b2703" + ], + [ + "gene_synonym", + "gutA" + ], + [ + "gene_synonym", + "gutE" + ], + [ + "gene_synonym", + "sbl" + ], + [ + "gene_synonym", + "srlA" + ], + [ + "gene_synonym", + "srlE" + ] + ], + "dna_sequence": "ATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCCCGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGAAATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACCGTTGCGGTGCTGTTTCAATCTGGTCGTGACACCATCGACACTGTATTAAAAACCATTCTGCCGTTTATGGCATTCGTCTCGGCGCTCATTGGCATCATTATGGCTTCTGGCCTTGGTGACTGGATTGCCCACGGTCTTGCTCCGCTGGCGAGCCATCCACTGGGTCTGGTCATGCTGGCGCTCATCTGTTCCTTCCCACTGCTTTCACCTTTCCTCGGCCCAGGCGCAGTTATCGCACAGGTTATCGGCGTATTGATTGGCGTGCAGATTGGTCTCGGCAATATTCCGCCGCATCTGGCTTTACCGGCACTGTTTGCCATCAACGCGCAGGCGGCCTGCGACTTCATCCCGGTCGGTTTGTCGCTGGCGGAAGCCCGTCAGGACACGGTTCGCGTCGGTGTCCCTTCTGTACTGGTGAGCCGCTTTTTAACCGGCGCGCCGACTGTACTGATCGCCTGGTTTGTCTCCGGTTTTATCTATCAATAG", + "dna_sequence_length": 960, + "functions": [ + "glucitol/sorbitol-specific enzyme IIB component of PTS" + ], + "id": "CDS_2666", + "location": [ + [ + "NC_000913", + 2826392, + "+", + 960 + ] + ], + "md5": "7969892bc529ee56128f27fa719d356f", + "parent_gene": "", + "protein_md5": "46cb054f679a0d65fafe09a8fcea5404", + "protein_translation": "MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSTVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008894" + ], + [ + "gene_synonym", + "ECK2699" + ], + [ + "gene_synonym", + "EcoGene:EG10970" + ], + [ + "gene_synonym", + "GI:16130611" + ], + [ + "gene_synonym", + "GeneID:948971" + ], + [ + "gene_synonym", + "JW2673" + ], + [ + "gene_synonym", + "NP_417184.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05706" + ], + [ + "gene_synonym", + "b2704" + ], + [ + "gene_synonym", + "gutB" + ], + [ + "gene_synonym", + "srlB" + ] + ], + "dna_sequence": "ATGACCGTTATTTATCAGACCACCATCACCCGTATCGGCGCGAGTGCCATTGACGCCCTCAGTGACCAGATGCTCATCACCTTTCGTGAAGGCGCGCCTGCGGACCTCGAAGAGTATTGCTTCATTCATTGCCACGGCGAGTTGAAAGGTGCACTCCATCCCGGTTTGCAATTTTCACTCGGGCAGCATCGCTATCCGGTGACCGCTGTTGGCAGCGTGGCGGAAGACAACCTTCGCGAACTGGGTCATGTCACCCTGCGCTTCGATGGTTTAAACGAAGCGGAATTTCCGGGCACTGTCCATGTGGCAGGCCCTGTCCCCGACGATATCGCGCCGGGATCGGTTTTGAAGTTTGAATCTGTTAAGGAGTAA", + "dna_sequence_length": 372, + "functions": [ + "glucitol/sorbitol-specific enzyme IIA component of PTS" + ], + "id": "CDS_2667", + "location": [ + [ + "NC_000913", + 2827362, + "+", + 372 + ] + ], + "md5": "6a08945d9e1387552289ac8147c53156", + "parent_gene": "", + "protein_md5": "16d6a44a03a4bbd3101e54c8b65efb7f", + "protein_translation": "MTVIYQTTITRIGASAIDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFESVKE", + "protein_translation_length": 123, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008896" + ], + [ + "gene_synonym", + "ECK2700" + ], + [ + "gene_synonym", + "EcoGene:EG10971" + ], + [ + "gene_synonym", + "GI:16130612" + ], + [ + "gene_synonym", + "GeneID:948937" + ], + [ + "gene_synonym", + "JW2674" + ], + [ + "gene_synonym", + "NP_417185.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05707" + ], + [ + "gene_synonym", + "b2705" + ], + [ + "gene_synonym", + "gutD" + ], + [ + "gene_synonym", + "srlD" + ] + ], + "dna_sequence": "ATGAATCAGGTTGCCGTTGTCATCGGTGGTGGGCAAACCTTAGGCGCGTTCCTGTGCCACGGTCTGGCTGCCGAGGGGTATCGCGTCGCGGTTGTCGATATTCAGAGCGACAAAGCCGCAAATGTGGCACAAGAAATTAACGCCGAATATGGTGAAAGTATGGCGTACGGTTTTGGTGCTGACGCCACTAGCGAGCAAAGCGTTCTGGCGCTCTCTCGTGGGGTAGATGAAATCTTTGGTCGCGTGGATTTGCTGGTCTACAGCGCCGGAATAGCAAAAGCAGCCTTTATCAGCGACTTCCAGCTCGGCGATTTTGACCGTTCGCTACAGGTGAATCTGGTGGGTTATTTCCTGTGTGCGCGTGAATTTTCGCGTTTGATGATCCGCGACGGGATTCAGGGGCGCATTATTCAGATCAACTCGAAATCCGGCAAAGTGGGCAGCAAACACAACTCTGGCTACAGCGCAGCGAAATTTGGTGGCGTCGGGCTGACTCAATCACTGGCGCTGGATCTGGCGGAGTACGGCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGA", + "dna_sequence_length": 780, + "functions": [ + "sorbitol-6-phosphate dehydrogenase" + ], + "id": "CDS_2668", + "location": [ + [ + "NC_000913", + 2827737, + "+", + 780 + ] + ], + "md5": "a33ae1d65c4625d8afe1e8f1f058737c", + "parent_gene": "", + "protein_md5": "9e97efd3d0b0906c6c7b160e25b92b4c", + "protein_translation": "MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008898" + ], + [ + "gene_synonym", + "ECK2701" + ], + [ + "gene_synonym", + "EcoGene:EG10972" + ], + [ + "gene_synonym", + "GI:16130613" + ], + [ + "gene_synonym", + "GeneID:948938" + ], + [ + "gene_synonym", + "JW2675" + ], + [ + "gene_synonym", + "NP_417186.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15081" + ], + [ + "gene_synonym", + "b2706" + ], + [ + "gene_synonym", + "gutM" + ], + [ + "gene_synonym", + "srlM" + ] + ], + "dna_sequence": "ATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGTTCCAGCGGGCGCTTTAAACCGCGGGTCGTGGTCGCCATCGCGCTGGACGATCAGCAGCGCATCGTCGACACCTTGTTTATGAAAGGACTGACCGTCTTCGCCCGACCGCAAAAAATTCCCGCAATTACCGGTATGCATGCGGGTGATTTACAGCCCGATGTGATCTTTCCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAA", + "dna_sequence_length": 360, + "functions": [ + "sorbitol=responsive srl operon transcriptional activator" + ], + "id": "CDS_2669", + "location": [ + [ + "NC_000913", + 2828621, + "+", + 360 + ] + ], + "md5": "979b4178eee686fff15eaa6d8455ed66", + "parent_gene": "", + "protein_md5": "a2d189749af6d11797f208916dc8dacd", + "protein_translation": "MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008900" + ], + [ + "gene_synonym", + "ECK2702" + ], + [ + "gene_synonym", + "EcoGene:EG10974" + ], + [ + "gene_synonym", + "GI:16130614" + ], + [ + "gene_synonym", + "GeneID:948942" + ], + [ + "gene_synonym", + "JW2676" + ], + [ + "gene_synonym", + "NP_417187.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15082" + ], + [ + "gene_synonym", + "b2707" + ], + [ + "gene_synonym", + "gutR" + ], + [ + "gene_synonym", + "srlR" + ] + ], + "dna_sequence": "ATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGTTTTATCCATGATGGCGATTCGATCATTCTTGATGCTGGCAGTACCGTTTTGCAGATGGTTCCCCTGCTCTCGCGCTTTAATAACATCACGGTGATGACCAACAGCCTGCATATCGTCAATGCGCTATCCGAACTGGATAACGAACAAACTATCCTGATGCCAGGCGGAACGTTTCGCAAAAAATCGGCCTCATTTCACGGGCAACTGGCAGAGAATGCCTTCGAGCATTTCACCTTCGATAAATTGTTTATGGGCACCGACGGCATCGATCTCAATGCGGGCGTAACCACCTTTAACGAGGTTTATACCGTCAGTAAGGCAATGTGCAATGCCGCGCGCGAAGTGATTTTGATGGCGGACTCATCAAAGTTTGGCCGTAAAAGCCCCAACGTAGTTTGCAGTCTTGAAAGCGTCGATAAGCTGATTACCGACGCAGGTATCGATCCGGCGTTTCGTCAGGCGCTGGAAGAGAAAGGGATCGATGTGATCATAACCGGAGAGAGCAATGAGTGA", + "dna_sequence_length": 774, + "functions": [ + "sorbitol-inducible srl operon transcriptional repressor" + ], + "id": "CDS_2670", + "location": [ + [ + "NC_000913", + 2829047, + "+", + 774 + ] + ], + "md5": "979455c265358ad0e695ae50685cfac4", + "parent_gene": "", + "protein_md5": "d8d0322f11a1f10f81fdf876adf44f1d", + "protein_translation": "MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008902" + ], + [ + "gene_synonym", + "ECK2703" + ], + [ + "gene_synonym", + "EcoGene:EG10973" + ], + [ + "gene_synonym", + "GI:90111480" + ], + [ + "gene_synonym", + "GeneID:947587" + ], + [ + "gene_synonym", + "JW5431" + ], + [ + "gene_synonym", + "NP_417188.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17115" + ], + [ + "gene_synonym", + "b2708" + ], + [ + "gene_synonym", + "gutQ" + ], + [ + "gene_synonym", + "srlQ" + ] + ], + "dna_sequence": "ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAGTTGCAGGAAGCAAGCCGTTTACCGGAACGTCTGGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCACTGTGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGGGCCACATTGGTAAGAAAATCGCCGCAACGCTTGCCAGTACCGGCACTCCGGCTTTTTTTGTCCATCCGGCAGAAGCGCTGCACGGCGATCTGGGGATGATCGAAAGCCGCGATGTGATGCTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCTGATTATTCCGCGTCTGGAAGATAAATCTATCGCGCTGCTGGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGGCAAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACCCTGATGATGGGTGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGATTTAATGAAGAAGATTTTGCCCGCTCCCACCCAGCCGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCATCATCTGATGCGCCGTGACGATGCCATCCCACAGGTGGCGTTAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGCCGCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAACAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGAAGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAATCACTGCCGCACCGGTGGTGGATGAAAACGGCAAACTCACCGGCGCAATAAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAA", + "dna_sequence_length": 966, + "functions": [ + "D-arabinose 5-phosphate isomerase" + ], + "id": "CDS_2671", + "location": [ + [ + "NC_000913", + 2829813, + "+", + 966 + ] + ], + "md5": "21c13d4eb29f6b2b15bde5c9a0248866", + "parent_gene": "", + "protein_md5": "449dd5c046c85ec2a6031e6d612a4336", + "protein_translation": "MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008904" + ], + [ + "gene_synonym", + "ECK2704" + ], + [ + "gene_synonym", + "EcoGene:EG12108" + ], + [ + "gene_synonym", + "GI:90111481" + ], + [ + "gene_synonym", + "GeneID:947186" + ], + [ + "gene_synonym", + "JW5843" + ], + [ + "gene_synonym", + "NP_417189.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37013" + ], + [ + "gene_synonym", + "b2709" + ], + [ + "gene_synonym", + "norR" + ], + [ + "gene_synonym", + "ygaA" + ] + ], + "dna_sequence": "ATGAGTTTTTCCGTTGATGTGCTGGCGAATATCGCCATCGAATTGCAGCGTGGGATTGGTCACCAGGATCGTTTTCAGCGCCTGATCACCACGCTACGTCAGGTGCTGGAGTGCGATGCGTCTGCGTTGCTACGTTACGATTCGCGGCAGTTTATTCCGCTTGCCATCGACGGTCTGGCAAAGGATGTACTCGGTAGACGCTTTGCGCTGGAAGGGCATCCACGGCTGGAAGCGATTGCCCGCGCCGGGGATGTGGTGCGCTTTCCCGCAGACAGCGAATTGCCCGATCCCTATGACGGTTTGATTCCTGGGCAGGAGAGTCTGAAGGTTCACGCCTGCGTTGGTCTGCCATTGTTTGCCGGGCAAAACCTGATCGGCGCACTGACGCTCGACGGGATGCAGCCCGATCAGTTCGATGTTTTCAGCGACGAAGAGCTACGGCTGATTGCTGCGCTGGCGGCGGGAGCGTTAAGCAATGCGTTGCTGATTGAACAACTGGAAAGCCAGAATATGCTGCCAGGCGATGCCACGCCGTTTGAAGCGGTGAAACAGACGCAGATGATTGGCTTGTCCCCTGGCATGACGCAACTGAAAAAAGAGATTGAGATTGTGGCGGCGTCCGATCTCAACGTCCTGATCAGCGGTGAGACTGGAACCGGTAAGGAGCTGGTGGCGAAAGCGATTCATGAAGCCTCGCCACGGGCGGTGAATCCGCTGGTCTATCTCAACTGTGCTGCACTGCCGGAAAGTGTGGCGGAAAGTGAGTTGTTCGGGCATGTGAAAGGAGCGTTTACTGGCGCTATCAGTAATCGCAGCGGGAAGTTTGAAATGGCGGATAACGGCACGCTGTTTCTGGATGAGATCGGCGAGTTGTCGTTGGCATTGCAGGCCAAGCTGCTGAGGGTGTTGCAGTATGGCGATATTCAGCGCGTTGGCGATGACCGTTGTTTGCGGGTCGATGTGCGCGTGCTGGCGGCGACTAACCGCGATTTACGCGAAGAGGTGCTGGCAGGGCGATTCCGCGCCGATTTGTTTCATCGCCTGAGCGTGTTTCCACTTTCGGTGCCGCCGCTGCGTGAGCGGGGCGATGATGTCATTCTGCTGGCGGGGTATTTCTGCGAGCAGTGTCGTTTGCGGCAGGGGCTCTCCCGCGTGGTATTAAGTGCCGGAGCGCGAAATTTACTGCAACACTACAGTTTTCCGGGAAACGTGCGCGAACTGGAACATGCTATTCATCGGGCGGTAGTTCTGGCGAGAGCCACCCGCAGCGGCGATGAAGTGATTCTTGAGGCGCAACATTTTGCTTTTCCTGAGGTGACGTTGCCGACGCCAGAAGTGGCGGCGGTGCCCGTTGTTAAGCAAAACCTGCGTGAAGCGACAGAAGCGTTCCAGCGTGAAACTATTCGTCAGGCACTGGCACAAAATCATCACAACTGGGCTGCCTGCGCGCGGATGCTGGAAACCGACGTCGCCAACCTGCATCGGCTGGCGAAACGTCTGGGATTGAAGGATTAA", + "dna_sequence_length": 1515, + "functions": [ + "anaerobic nitric oxide reductase DNA-binding transcriptional activator" + ], + "id": "CDS_2672", + "location": [ + [ + "NC_000913", + 2832289, + "-", + 1515 + ] + ], + "md5": "c186badc8099f78b2fc5946859d63e46", + "parent_gene": "", + "protein_md5": "63f92f773c1520e906b7854d4c930c91", + "protein_translation": "MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD", + "protein_translation_length": 504, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008910" + ], + [ + "gene_synonym", + "ECK2705" + ], + [ + "gene_synonym", + "EcoGene:EG12963" + ], + [ + "gene_synonym", + "GI:16130617" + ], + [ + "gene_synonym", + "GeneID:948979" + ], + [ + "gene_synonym", + "JW2680" + ], + [ + "gene_synonym", + "NP_417190.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46877" + ], + [ + "gene_synonym", + "b2710" + ], + [ + "gene_synonym", + "flrd" + ], + [ + "gene_synonym", + "norV" + ], + [ + "gene_synonym", + "ygaI" + ], + [ + "gene_synonym", + "ygaJ" + ], + [ + "gene_synonym", + "ygaK" + ] + ], + "dna_sequence": "ATGTCTATTGTGGTGAAAAATAACATTCATTGGGTTGGTCAACGTGACTGGGAAGTGCGTGATTTTCACGGCACGGAATATAAAACGCTGCGCGGCAGCAGCTACAATAGCTACCTCATCCGCGAAGAAAAAAACGTGCTGATCGACACCGTCGACCATAAATTCAGCCGCGAATTTGTGCAGAACCTGCGTAATGAAATCGATCTGGCGGATATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCCGATACGCCGATCTACTGTACAGCCAACGCTATCGACTCGATAAATGGTCATCACCATCATCCGGAGTGGAATTTTAATGTGGTGAAAACTGGCGACACGCTGGATATCGGCAACGGCAAACAGCTCATTTTTGTCGAAACACCAATGCTGCACTGGCCGGACAGCATGATGACTTACCTGACAGGCGACGCGGTGCTGTTCAGTAACGATGCTTTCGGTCAACACTACTGCGACGAGCATCTGTTCAACGATGAAGTGGATCAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAACACCGAAAATTACCGAGATCCTGGGCTTTAACTTACCAGTCGATATGATAGCCACTTCCCACGGCGTGGTATGGCGCGATAACCCGACGCAAATTGTCGAGCTGTACCTGAAATGGGCGGCTGATTATCAGGAAGACAGAATCACCATTTTCTACGACACCATGTCGAATAACACCCGCATGATGGCTGACGCTATCGCCCAGGGGATTGCGGAAACCGACCCACGCGTGGCGGTGAAAATTTTCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTTCCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCCTGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTGAACACGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATACGGTAGTTAAAGAAGAAACCTCTGCCACCACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGACGTTGCGCCAGGAACGCCGTGGAGTGAAGTCCCGGATAACTTCCTCTGCCCGGAATGCTCCCTCGGCAAAGACGTCTTTGAAGAACTGGCATCGGAGGCAAAATGA", + "dna_sequence_length": 1440, + "functions": [ + "anaerobic nitric oxide reductase flavorubredoxin" + ], + "id": "CDS_2673", + "location": [ + [ + "NC_000913", + 2832476, + "+", + 1440 + ] + ], + "md5": "fd56f1ebf451495d0ed3bb4b973bec2f", + "parent_gene": "", + "protein_md5": "4caee55307f8aa673dfbe7dcf406a68c", + "protein_translation": "MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALKLCREHGREIARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFEELASEAK", + "protein_translation_length": 479, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008912" + ], + [ + "gene_synonym", + "ECK2706" + ], + [ + "gene_synonym", + "EcoGene:EG12450" + ], + [ + "gene_synonym", + "GI:16130618" + ], + [ + "gene_synonym", + "GeneID:947088" + ], + [ + "gene_synonym", + "JW2681" + ], + [ + "gene_synonym", + "NP_417191.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37596" + ], + [ + "gene_synonym", + "b2711" + ], + [ + "gene_synonym", + "norW" + ], + [ + "gene_synonym", + "ygaL" + ], + [ + "gene_synonym", + "ygbD" + ] + ], + "dna_sequence": "ATGAGTAACGGCATTGTGATCATCGGTTCGGGCTTCGCCGCCCGCCAACTGGTGAAAAATATTCGCAAACAGGACGCCACTATTCCATTAACCCTGATTGCCGCCGACAGCATGGATGAGTACAACAAACCTGACCTCAGCCATGTTATCAGTCAGGGGCAACGTGCCGATGACCTTACCCGCCAGACGGCGGGTGAATTTGCCGAGCAGTTTAATCTGCACCTGTTTCCACAAACCTGGGTGACGGATATCGATGCCGAAGCCCGTGTGGTGAAAAGCCAGAATAATCAGTGGCAATACGACAAGCTAGTACTGGCAACCGGTGCCAGTGCCTTTGTCCCGCCTGTGCCTGGGCGTGAGTTAATGCTGACGTTAAATAGTCAGCAAGAGTATCGCGCCTGTGAAACGCAACTGCGGGATGCCCGACGCGTGTTGATTGTTGGCGGTGGTTTGATTGGTAGCGAACTGGCGATGGATTTTTGTCGTGCAGGCAAAGCGGTCACGCTAATCGACAACGCTGCCAGTATTCTGGCGTCGTTAATGCCACCGGAAGTAAGCAGCCGCTTGCAGCATCGGTTGACGGAGATGGGCGTTCATCTGCTGTTGAAATCTCAGTTACAGGGGCTGGAAAAAACGGATTCTGGCATTCAGGCAACGCTGGACCGCCAGCGCAATATCGAAGTGGATGCGGTAATTGCCGCCACCGGACTGCGCCCGGAAACCGCCCTGGCACGACGCGCCGGGCTGACGATTAATCGCGGCGTTTGCGTCGATAGTTATCTGCAAACCAGTAATACCGATATTTACGCGCTGGGCGATTGCGCGGAAATTAACGGTCAGGTATTGCCGTTCCTCCAGCCGATTCAACTTAGCGCGATGGTGCTGGCAAAAAATCTTCTCGGCAATAACACGCCGCTGAAACTCCCGGCGATGCTGGTGAAAATCAAAACGCCGGAATTACCGCTGCATCTGGCAGGCGAAACCCAGCGTCAGGATTTACGCTGGCAAATTAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAG", + "dna_sequence_length": 1134, + "functions": [ + "NADH:flavorubredoxin oxidoreductase" + ], + "id": "CDS_2674", + "location": [ + [ + "NC_000913", + 2833912, + "+", + 1134 + ] + ], + "md5": "41aacfdb36a3039d3607616a816a6fde", + "parent_gene": "", + "protein_md5": "97f73d52060066e079261745cc3fc887", + "protein_translation": "MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQATLDRQRNIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNTDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008915" + ], + [ + "gene_synonym", + "ECK2707" + ], + [ + "gene_synonym", + "EcoGene:EG11551" + ], + [ + "gene_synonym", + "GI:16130619" + ], + [ + "gene_synonym", + "GeneID:944963" + ], + [ + "gene_synonym", + "JW5433" + ], + [ + "gene_synonym", + "NP_417192.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30131" + ], + [ + "gene_synonym", + "b2712" + ], + [ + "gene_synonym", + "hydA" + ], + [ + "gene_synonym", + "hypF" + ] + ], + "dna_sequence": "ATGGCAAAAAACACATCTTGCGGTGTCCAACTGCGTATTCGTGGCAAAGTGCAGGGCGTCGGTTTTCGTCCGTTTGTCTGGCAGCTGGCACAGCAATTAAATCTTCACGGCGATGTCTGTAATGACGGCGATGGCGTAGAAGTCCGGCTGCGGGAAGACCCGGAAACGTTTCTTGTTCAATTGTATCAGCACTGCCCGCCGCTGGCGCGTATTGATAGCGTCGAGCGTGAGCCGTTTATCTGGTCACAACTGCCCACCGAGTTCACTATACGCCAGAGCACAGGCGGCACCATGAATACGCAAATTGTTCCCGATGCCGCTACTTGCCCTGCTTGCCTTGCCGAAATGAATACCCCAGGCGAACGGCGTTATCGTTATCCGTTTATCAACTGTACCCACTGCGGCCCGCGTTTCACCATTATTCGCGCCATGCCTTACGACCGCCCGTTTACCGTGATGGCGGCGTTTCCGCTATGTCCGGCCTGTGACAAAGAGTACCGTGACCCGCTCGATCGTCGCTTCCACGCCCAGCCGGTGGCCTGCCCGGAGTGTGGCCCGCATCTTGAATGGGTAAGTCATGGTGAACATGCGGAACAAGAGGCGGCATTACAGGCAGCTATCGCACAGTTAAAAATGGGCAAAATTGTCGCCATCAAAGGGATTGGCGGATTTCATCTTGCCTGCGATGCACGTAACAGTAACGCGGTGGCGACACTTCGGGCGCGCAAACATCGCCCGGCGAAACCGCTGGCGGTCATGTTGCCAGTGGCTGACGGTTTACCAGACGCTGCGCGCCAGTTGCTTACCACGCCCGCCGCGCCGATTGTGCTGGTGGATAAAAAATACGTTCCTGAGCTTTGTGATGATATCGCCCCTGACCTTAACGAAGTCGGGGTAATGTTGCCTGCGAACCCGCTCCAGCATTTGCTGTTACAGGAACTGCAATGCCCGCTGGTGATGACCTCCGGCAACCTGAGCGGTAAACCACCAGCTATCAGCAACGAACAGGCGCTGGCGGATTTGCAGGGCATTGCCGACGGATTCTTGATACATAACCGCGACATCGTGCAGCGGATGGATGATTCGGTGGTGCGCGAAAGCGGCGAAATGCTGCGCCGTTCGCGGGGGTATGTGCCGGATGCGCTGGCTTTGCCTCCGGGCTTTAAAAATGTTCCGCCTGTGCTGTGTCTCGGCGCGGATCTGAAAAATACCTTCTGCCTGGTGCGCGGTGAACAAGCGGTGTTGAGTCAGCATCTGGGCGATTTAAGTGACGATGGCATCCAGATGCAGTGGCGCGAAGCGTTACGCCTGATGCAAAACATCTACGATTTTACCCCGCAATACGTTGTGCATGACGCGCATCCGGGCTATGTCTCCAGCCAGTGGGCGCGTGAAATGAATCTGCCGACGCAAACGGTACTGCATCATCATGCCCATGCAGCGGCGTGTCTGGCAGAGCATCAGTGGCCGCTGGATGGCGGTGATGTCATTGCTTTGACGCTCGACGGTATCGGTATGGGGGAGAACGGCGCTTTGTGGGGCGGCGAGTGCCTGCGGGTGAACTATCGCGAATGTGAGCACCTGGGCGGCTTGCCTGCAGTGGCGCTTCCGGGTGGCGATTTGGCAGCGAAGCAGCCGTGGCGAAACCTGCTGGCGCAGTGCCTGCGCTTTGTGCCGGAGTGGCAGAATTACTCTGAAACAGCAAGTGTGCAACAGCAAAACTGGAGCGTGCTGGCGCGGGCCATTGAGCGTGGAATTAACGCGCCGCTGGCGTCATCGTGTGGGCGTTTTTTCGATGCAGTGGCGGCGGCACTGGGCTGTGCGCCAGCCACGTTAAGTTATGAAGGTGAAGCGGCTTGTGCTCTGGAGGCGCTCGCAGCCTCATGCCACGGAGTGACGCATCCGGTGACAATGCCGCGGGTGGACAATCAACTGGATCTCGCCACTTTCTGGCAGCAGTGGCTGAACTGGCAGGCACCGGTTAATCAACGCGCGTGGGCGTTTCATGATGCGCTGGCGCAGGGTTTTGCCGCGTTGATGCGTGAGCAGGCCACGATGCGTGGTATCACTACGCTGGTATTTAGCGGCGGGGTTATTCATAACCGTTTGCTGCGTGCACGTCTGGCGCATTATCTCGCTGATTTCACATTGCTCTTTCCACAGAGTTTACCGGCGGGTGATGGCGGTTTGTCTCTGGGGCAGGGGGTTATTGCTGCGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAA", + "dna_sequence_length": 2253, + "functions": [ + "carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein" + ], + "id": "CDS_2675", + "location": [ + [ + "NC_000913", + 2837425, + "-", + 2253 + ] + ], + "md5": "875dda10e5e52bc8ecf3ff5fdd2c51ab", + "parent_gene": "", + "protein_md5": "f4985eca32fae16f846c01d9774093a2", + "protein_translation": "MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQNG", + "protein_translation_length": 750, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008919" + ], + [ + "gene_synonym", + "ECK2708" + ], + [ + "gene_synonym", + "EcoGene:EG11552" + ], + [ + "gene_synonym", + "GI:16130620" + ], + [ + "gene_synonym", + "GeneID:947190" + ], + [ + "gene_synonym", + "JW2683" + ], + [ + "gene_synonym", + "NP_417193.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAK4" + ], + [ + "gene_synonym", + "b2713" + ], + [ + "gene_synonym", + "hydN" + ] + ], + "dna_sequence": "ATGAACCGTTTCATCATTGCTGACGCGAGTAAATGTATTGGTTGCCGTACCTGTGAAGTAGCGTGCGTGGTTTCTCATCAGGAAAATCAGGACTGTGCATCGCTGACCCCGGAAACTTTTTTACCGCGTATCCATGTCATTAAAGGTGTGAACATTTCCACGGCGACAGTTTGCCGTCAGTGTGAAGATGCACCGTGCGCTAACGTCTGCCCGAATGGTGCTATCAGCCGTGATAAAGGGTTTGTTCATGTGATGCAGGAACGTTGCATTGGTTGCAAAACCTGCGTTGTGGCTTGCCCGTATGGTGCGATGGAAGTGGTGGTACGTCCGGTGATCCGCAACAGCGGCGCGGGTCTGAATGTACGGGCTGACAAAGCCGAAGCCAATAAATGCGACCTGTGCAACCATCGTGAAGACGGCCCGGCGTGTATGGCGGCTTGCCCGACTCATGCGCTGATTTGTGTCGATCGTAATAAACTTGAACAACTGAGCGCAGAAAAACGCCGCCGTACGGCGCTGATGTTCTAA", + "dna_sequence_length": 528, + "functions": [ + "formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit" + ], + "id": "CDS_2676", + "location": [ + [ + "NC_000913", + 2838105, + "-", + 528 + ] + ], + "md5": "c05a0119d5aae8f75827861edfda527a", + "parent_gene": "", + "protein_md5": "cc70f09fe5af29105781fd3a8a15181b", + "protein_translation": "MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008922" + ], + [ + "gene_synonym", + "ECK2709" + ], + [ + "gene_synonym", + "EcoGene:EG10087" + ], + [ + "gene_synonym", + "GI:345452722" + ], + [ + "gene_synonym", + "GeneID:947305" + ], + [ + "gene_synonym", + "JW5434" + ], + [ + "gene_synonym", + "NP_417194.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24242" + ], + [ + "gene_synonym", + "ascG" + ], + [ + "gene_synonym", + "b2714" + ], + [ + "gene_synonym", + "sac" + ] + ], + "dna_sequence": "ATGACGACGATGCTGGAAGTGGCGAAGCGCGCCGGGGTTTCAAAAGCGACCGTTTCCCGCGTGCTTTCAGGTAATGGCTACGTCAGCCAGGAGACTAAAGATCGCGTGTTTCAGGCGGTAGAAGAGAGCGGTTACCGTCCAAACTTGCTGGCGCGCAATCTGTCGGCGAAGAGTACTCAGACGCTGGGGCTGGTAGTGACCAACACGCTTTACCACGGCATTTATTTTAGTGAATTACTCTTTCATGCCGCGCGAATGGCGGAAGAGAAAGGGCGGCAGTTGCTATTGGCAGATGGTAAACACAGCGCAGAAGAAGAGCGCCAGGCGATTCAGTATCTGCTGGATCTGCGCTGCGACGCGATCATGATTTACCCGCGTTTTTTAAGCGTGGATGAGATCGATGACATCATTGACGCGCACAGTCAGCCGATAATGGTGCTTAATCGCCGCCTGCGCAAAAACAGCAGCCATAGCGTCTGGTGCGATCATAAACAGACCAGTTTTAACGCCGTGGCAGAGTTGATAAACGCCGGGCATCAGGAGATTGCTTTCCTTACCGGCTCGATGGATTCCCCCACCAGCATTGAACGTCTTGCCGGGTATAAAGACGCGCTGGCGCAGCATGGTATTGCGCTCAATGAAAAACTTATCGCTAACGGTAAATGGACGCCTGCCAGCGGGGCCGAAGGGGTAGAAATGTTGCTCGAACGTGGGGCTAAATTTAGCGCGTTAGTTGCCAGTAACGACGATATGGCGATAGGTGCGATGAAAGCGTTACACGAGCGCGGCGTAGCGGTGCCAGAGCAGGTGTCAGTTATCGGATTCGATGATATCGCTATTGCCCCCTACACCGTTCCGGCGCTCTCCAGCGTAAAAATTCCGGTGACTGAGATGATTCAGGAAATTATTGGACGGCTGATTTTTATGCTCGATGGCGGGGATTTCTCACCGCCGAAAACCTTCAGCGGAAAACTGATCCGCCGCGACTCACTCATTGCTCCTTCGCGATAA", + "dna_sequence_length": 1011, + "functions": [ + "asc operon transcriptional repressor", + "prpBC operon repressor" + ], + "id": "CDS_2677", + "location": [ + [ + "NC_000913", + 2839264, + "-", + 1011 + ] + ], + "md5": "f90997b926d148cb41cb3740b5323df7", + "parent_gene": "", + "protein_md5": "92de9febea1126c7550b695d5ebe8184", + "protein_translation": "MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAPSR", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008926" + ], + [ + "gene_synonym", + "ECK2710" + ], + [ + "gene_synonym", + "EcoGene:EG10086" + ], + [ + "gene_synonym", + "GI:49176263" + ], + [ + "gene_synonym", + "GeneID:947154" + ], + [ + "gene_synonym", + "JW5435" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24241" + ], + [ + "gene_synonym", + "YP_026182.1" + ], + [ + "gene_synonym", + "ascF" + ], + [ + "gene_synonym", + "b2715" + ], + [ + "gene_synonym", + "sac" + ] + ], + "dna_sequence": "ATGGCCAAAAATTATGCGGCGCTGGCACGCTCGGTGATAGCGGCACTGGGCGGCGTTGATAACATCTCGGCGGTCACGCACTGTATGACGCGGTTGCGCTTTGTTATCAAAGATGATGCACTTATCGACAGCCCGACGTTAAAAACCATCCCCGGCGTGCTCGGCGTGGTACGTAGTGACAACCAGTGTCAGGTGATTATCGGCAATACCGTTTCACAAGCCTTTCAGGAAGTCGTCAGCCTGCTGCCGGGAGATATGCAGCCCGCACAGCCCGTGGGTAAACCCAAACTCACGCTACGTCGCATTGGTGCGGGGATCCTCGATGCGCTGATCGGCACCATGTCACCGCTGATCCCGGCGATTATCGGCGGATCGATGGTCAAACTGCTGGCAATGATCCTCGAGATGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCCCAGGGTGAACATGTCGAATTTGCCCTGATTCCGGTCACCGCGGTGAAATACACCTACACGGTGATCCCGGCGCTGGTGATGACCTGGTGCCTGTCATATATCGAACGCTGGGTGGACAGCATTACACCGGCGGTGACCAAAAACTTCCTCAAACCAATGCTGATTGTGTTGATTGCCGCACCGCTGGCAATCCTGCTGATTGGCCCGATTGGTATCTGGATCGGTAGCGCCATTTCGGCGCTGGTTTACACCATTCATGGTTATCTGGGCTGGCTTTCAGTCGCCATTATGGGCGCGCTGTGGCCTCTGCTGGTAATGACCGGGATGCACCGCGTCTTTACGCCAACCATCATTCAGACCATTGCCGAAACCGGCAAAGAAGGGATGGTCATGCCGTCAGAGATCGGCGCTAACCTGTCGCTGGGCGGTTCATCACTGGCAGTGGCGTGGAAAACGAAAAACCCGGAACTGCGTCAGACGGCGCTGGCTGCGGCGGCATCAGCCATTATGGCGGGGATTTCCGAACCGGCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGCGGCGCGGTTGCCGGTATGGCGGGGCTTGCCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCATGGCGCTGGCGGTGGTGCTGTCGTTTATCCTCACACTGTTGCTCGGCTTTGAGGATATTCCTGTTGAGGAAGCGGCTGCCCAGGCGCGAAAGTATCAGAGCGTACAACCGACCGTCGCCAAAGAAGTAAGTCTTAATTGA", + "dna_sequence_length": 1458, + "functions": [ + "cellobiose/arbutin/salicin-specific PTS enzymes, IIB and IC components" + ], + "id": "CDS_2678", + "location": [ + [ + "NC_000913", + 2839524, + "+", + 1458 + ] + ], + "md5": "aea0b69e37ce08c8e5a702d936dd2283", + "parent_gene": "", + "protein_md5": "6394ff7098b0249d29a4a3c8674f4de7", + "protein_translation": "MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN", + "protein_translation_length": 485, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008928" + ], + [ + "gene_synonym", + "ECK2711" + ], + [ + "gene_synonym", + "EcoGene:EG10085" + ], + [ + "gene_synonym", + "GI:16130623" + ], + [ + "gene_synonym", + "GeneID:947460" + ], + [ + "gene_synonym", + "JW2686" + ], + [ + "gene_synonym", + "NP_417196.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24240" + ], + [ + "gene_synonym", + "ascB" + ], + [ + "gene_synonym", + "b2716" + ], + [ + "gene_synonym", + "sac" + ] + ], + "dna_sequence": "ATGTCAGTATTTCCAGAAAGTTTTTTATGGGGCGGCGCGCTTGCCGCCAACCAGTCTGAAGGTGCGTTCCGTGAAGGTGACAAAGGTCTGACCACTGTCGATATGATCCCACACGGCGAGCATCGAATGGCGGTGAAACTGGGGCTGGAAAAACGTTTTCAGTTGCGAGATGACGAGTTTTATCCCAGCCATGAGGCGACGGATTTTTATCATCGTTATAAAGAAGATATCGCCCTGATGGCAGAGATGGGATTCAAGGTTTTCCGTACCTCAATTGCCTGGAGCCGTCTCTTTCCGCAGGGCGATGAAATCACGCCCAATCAGCAGGGCATTGCTTTTTATCGTTCTGTCTTTGAAGAGTGTAAAAAGTACGGTATCGAACCGCTGGTCACGTTGTGCCACTTCGATGTGCCGATGCATCTGGTCACCGAATATGGCTCCTGGCGTAACCGCAAGCTGGTGGAGTTTTTCAGCCGCTACGCCAGAACCTGCTTTGAAGCATTTGATGGTCTGGTGAAATACTGGCTAACCTTCAATGAAATCAACATTATGTTGCATAGCCCGTTCTCCGGCGCGGGTCTGGTGTTTGAAGAAGGTGAAAATCAGGATCAGGTGAAATATCAGGCCGCGCATCACCAGCTGGTTGCCAGTGCGCTAGCCACCAAAATCGCCCATGAGGTTAACCCGCAAAATCAGGTGGGCTGTATGCTGGCGGGCGGTAACTTCTACCCTTACAGTTGCAAGCCGGAAGATGTCTGGGCGGCGCTGGAGAAAGACCGGGAAAACCTGTTTTTTATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTTATCAGAAGCCGCTGTTTCTGGTGGAAAACGGCCTGGGCGCAAAAGATGAATTTGCTGCCAATGGCGAGATTAACGACGACTATCGCATCAGCTACTTACGCGAACATATCCGCGCAATGGGCGAAGCGATTGCAGACGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGCTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAG", + "dna_sequence_length": 1425, + "functions": [ + "cryptic 6-phospho-beta-glucosidase" + ], + "id": "CDS_2679", + "location": [ + [ + "NC_000913", + 2840990, + "+", + 1425 + ] + ], + "md5": "bef966e897676d47fbda00e9909424a9", + "parent_gene": "", + "protein_md5": "914bd95cb20352d4df283c90fccbce79", + "protein_translation": "MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008931" + ], + [ + "gene_synonym", + "ECK2712" + ], + [ + "gene_synonym", + "EcoGene:EG13396" + ], + [ + "gene_synonym", + "GI:16130624" + ], + [ + "gene_synonym", + "GeneID:947428" + ], + [ + "gene_synonym", + "JW2687" + ], + [ + "gene_synonym", + "NP_417197.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEV9" + ], + [ + "gene_synonym", + "b2717" + ], + [ + "gene_synonym", + "hycI" + ] + ], + "dna_sequence": "GTGACTGACGTTTTACTCTGTGTTGGCAATAGCATGATGGGCGATGATGGCGCAGGTCCGCTGCTGGCGGAAAAGTGCGCCGCCGCGCCGAAAGGTAACTGGGTGGTGATTGACGGCGGTAGCGCACCGGAAAACGACATCGTCGCTATCCGTGAACTGCGCCCGACACGACTGCTGATTGTCGACGCCACGGATATGGGGCTAAACCCCGGCGAGATCCGCATCATCGACCCGGATGATATCGCCGAGATGTTTATGATGACTACCCATAACATGCCGTTGAATTACCTTATCGACCAGTTGAAAGAAGATATTGGCGAAGTGATTTTCCTCGGCATTCAGCCGGATATCGTCGGCTTTTACTACCCGATGACCCAGCCGATTAAAGATGCGGTAGAAACCGTTTATCAACGACTGGAAGGCTGGGAAGGAAATGGCGGCTTCGCGCAGTTAGCGGTGGAAGAAGAGTAG", + "dna_sequence_length": 471, + "functions": [ + "protease involved in processing C-terminal end of HycE" + ], + "id": "CDS_2680", + "location": [ + [ + "NC_000913", + 2843043, + "-", + 471 + ] + ], + "md5": "3f649bc465faa1cac9b16144cb017b67", + "parent_gene": "", + "protein_md5": "7d9566c45bae9820562fb4718b1c11d4", + "protein_translation": "MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008933" + ], + [ + "gene_synonym", + "ECK2713" + ], + [ + "gene_synonym", + "EcoGene:EG10481" + ], + [ + "gene_synonym", + "GI:16130625" + ], + [ + "gene_synonym", + "GeneID:947438" + ], + [ + "gene_synonym", + "JW2688" + ], + [ + "gene_synonym", + "NP_417198.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEV7" + ], + [ + "gene_synonym", + "b2718" + ], + [ + "gene_synonym", + "hevH" + ], + [ + "gene_synonym", + "hycH" + ] + ], + "dna_sequence": "ATGAGTGAAAAGGTGGTGTTCAGTCAACTGAGCCGTAAATTTATTGATGAGAACGATGCCACGCCCGCCGAGGCGCAGCAGGTGGTCTATTACAGCCTGGCGATTGGTCACCACCTTGGGGTTATCGATTGCCTGGAAGCGGCGCTCACCTGCCCGTGGGATGAATATCTGGCATGGATTGCCACTCTGGAGGCAGGCAGTGAAGCCCGCCGCAAAATGGAAGGCGTGCCGAAATATGGTGAGATCGTCATCGACATTAACCATGTGCCGATGCTGGCCAACGCATTCGATAAAGCCCGGGCAGCGCAAACTTCGCAGCAGCAGGAATGGAGTACAATGCTGTTAAGTATGCTGCATGATATTCATCAGGAAAACGCCATCTATTTGATGGTGAGGAGACTGCGTGACTGA", + "dna_sequence_length": 411, + "functions": [ + "hydrogenase 3 maturation protein" + ], + "id": "CDS_2681", + "location": [ + [ + "NC_000913", + 2843446, + "-", + 411 + ] + ], + "md5": "84e95b6d8d5d1df1a5069f485783bbb4", + "parent_gene": "", + "protein_md5": "06cb9b04c3aa4d6c8d9b3dba077c19c2", + "protein_translation": "MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008936" + ], + [ + "gene_synonym", + "ECK2714" + ], + [ + "gene_synonym", + "EcoGene:EG10480" + ], + [ + "gene_synonym", + "GI:16130626" + ], + [ + "gene_synonym", + "GeneID:947191" + ], + [ + "gene_synonym", + "JW2689" + ], + [ + "gene_synonym", + "NP_417199.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16433" + ], + [ + "gene_synonym", + "b2719" + ], + [ + "gene_synonym", + "hevG" + ], + [ + "gene_synonym", + "hycG" + ] + ], + "dna_sequence": "ATGAGCAATTTATTAGGCCCCCGTGACGCCAACGGCATTCCGGTCCCCATGACGGTGGATGAATCCATCGCCAGCATGAAGGCGTCGTTACTGAAAAAAATCAAACGTTCTGCCTATGTTTACCGCGTGGACTGCGGCGGCTGCAACGGTTGCGAAATCGAAATTTTCGCCACGCTTTCGCCGCTGTTTGATGCAGAACGCTTCGGCATTAAAGTCGTTCCTTCACCGCGTCATGCGGATATTTTACTGTTTACCGGCGCGGTCACCCGTGCAATGCGATCCCCTGCGCTGCGTGCGTGGCAGTCCGCGCCGGACCCGAAAATTTGTATCTCCTACGGTGCCTGCGGTAACAGTGGCGGGATCTTCCACGATCTCTACTGCGTGTGGGGCGGTACGGATAAAATTGTCCCTGTGGATGTTTATATCCCTGGCTGCCCGCCAACGCCTGCCGCCACGCTGTACGGCTTTGCAATGGCGCTCGGCCTGCTGGAGCAGAAAATTCACGCCCGTGGGCCGGGTGAACTGGATGAACAACCGGCGGAGATCCTGCATGGTGATATGGTGCAGCCGCTGCGCGTGAAAGTGGATCGCGAAGCACGTCGCCTGGCGGGTTATCGTTACGGTCGTCAGATTGCCGATGATTACCTTACACAGTTAGGGCAGGGCGAAGAACAGGTTGCACGCTGGCTGGAAGCGGAAAACGATCCGCGTCTGAACGAGATTGTCAGCCATCTGAATCATGTTGTTGAAGAGGCGCGTATCCGATGA", + "dna_sequence_length": 768, + "functions": [ + "hydrogenase 3 and formate hydrogenase complex, HycG subunit" + ], + "id": "CDS_2682", + "location": [ + [ + "NC_000913", + 2844210, + "-", + 768 + ] + ], + "md5": "b3d492f99b1858900e28e8723086dd27", + "parent_gene": "", + "protein_md5": "423b1dc960f530f19d34f8d311474fc7", + "protein_translation": "MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008942" + ], + [ + "gene_synonym", + "ECK2715" + ], + [ + "gene_synonym", + "EcoGene:EG10479" + ], + [ + "gene_synonym", + "GI:16130627" + ], + [ + "gene_synonym", + "GeneID:947048" + ], + [ + "gene_synonym", + "JW2690" + ], + [ + "gene_synonym", + "NP_417200.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16432" + ], + [ + "gene_synonym", + "b2720" + ], + [ + "gene_synonym", + "hevF" + ], + [ + "gene_synonym", + "hycF" + ] + ], + "dna_sequence": "ATGTTTACCTTTATCAAAAAAGTCATCAAAACCGGCACGGCGACCTCGTCTTATCCGCTGGAGCCGATTGCGGTTGATAAAAACTTCCGTGGTAAGCCAGAGCAGAACCCGCAGCAGTGCATCGGCTGCGCGGCCTGCGTCAATGCCTGCCCGTCAAACGCCTTAACGGTTGAAACTGACCTCGCCACAGGAGAGCTTGCCTGGGAGTTTAATCTTGGGCACTGCATCTTCTGTGGACGCTGCGAAGAAGTCTGCCCGACGGCGGCGATCAAACTGTCGCAAGAGTACGAACTGGCGGTGTGGAAGAAAGAAGACTTCCTGCAACAGTCCCGCTTCGCGCTGTGCAACTGCCGCGTCTGCAATCGTCCTTTCGCCGTCCAGAAAGAGATCGACTACGCCATTGCGCTGCTTAAGCACAACGGCGACAGCCGCGCGGAAAACCACCGCGAAAGCTTTGAGACTTGCCCGGAATGTAAGCGCCAGAAATGCCTGGTGCCGTCCGACCGTATTGAACTGACTCGCCATATGAAAGAGGCCATCTGA", + "dna_sequence_length": 543, + "functions": [ + "formate hydrogenlyase complex iron-sulfur protein" + ], + "id": "CDS_2683", + "location": [ + [ + "NC_000913", + 2844752, + "-", + 543 + ] + ], + "md5": "6e1361ebe4522ab41a3af1f390ca5b7a", + "parent_gene": "", + "protein_md5": "b2d92ef8bbc9c4d42558552351a33811", + "protein_translation": "MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTRHMKEAI", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008944" + ], + [ + "gene_synonym", + "ECK2716" + ], + [ + "gene_synonym", + "EcoGene:EG10478" + ], + [ + "gene_synonym", + "GI:16130628" + ], + [ + "gene_synonym", + "GeneID:947396" + ], + [ + "gene_synonym", + "JW2691" + ], + [ + "gene_synonym", + "NP_417201.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16431" + ], + [ + "gene_synonym", + "b2721" + ], + [ + "gene_synonym", + "hevE" + ], + [ + "gene_synonym", + "hycE" + ] + ], + "dna_sequence": "ATGTCTGAAGAAAAATTAGGTCAACATTATCTCGCCGCGCTGAATGAGGCATTTCCGGGCGTCGTGCTGGACCACGCCTGGCAGACCAAAGATCAGCTGACTGTCACCGTAAAGGTGAACTACCTGCCGGAAGTGGTGGAGTTTCTTTACTACAAACAGGGTGGCTGGCTGTCGGTGCTGTTTGGTAACGACGAACGCAAACTGAATGGTCATTACGCCGTTTACTACGTGCTGTCGATGGAGAAGGGCACTAAGTGTTGGATTACGGTTCGCGTCGAAGTTGACGCCAACAAACCGGAATATCCGTCCGTGACGCCGCGCGTTCCGGCGGCGGTGTGGGGCGAGCGTGAAGTGCGCGATATGTACGGTTTGATTCCGGTTGGTCTGCCGGATGAACGTCGTCTGGTGCTGCCGGATGACTGGCCGGATGAACTTTATCCGCTGCGTAAAGACAGCATGGATTATCGTCAGCGTCCGGCACCGACCACCGATGCTGAAACCTACGAGTTCATCAACGAACTGGGCGACAAGAAAAACAACGTCGTGCCGATTGGTCCGCTGCACGTCACTTCTGATGAACCGGGCCACTTCCGTCTGTTCGTCGATGGCGAAAACATTATCGACGCCGACTACCGTCTGTTCTACGTCCATCGCGGCATGGAAAAACTGGCGGAAACCCGTATGGGTTATAACGAAGTGACCTTCCTCTCTGACCGTGTGTGCGGGATCTGCGGCTTTGCCCACAGCACCGCCTACACCACGTCGGTGGAAAACGCGATGGGTATTCAGGTGCCAGAACGTGCGCAGATGATCCGCGCCATTCTGCTGGAGGTAGAACGCTTGCACTCGCATCTGCTCAACCTTGGCCTGGCCTGTCACTTTACCGGCTTCGACTCCGGCTTTATGCAGTTCTTCCGCGTGCGTGAAACCTCCATGAAAATGGCAGAGATCCTTACCGGTGCGCGTAAAACCTACGGCCTGAACTTGATCGGCGGGATTCGTCGCGATCTGCTGAAAGACGACATGATCCAGACCCGCCAGCTGGCACAACAGATGCGTCGTGAAGTGCAGGAGCTGGTGGATGTGCTGCTGAGCACTCCGAACATGGAACAGCGCACTGTCGGCATTGGTCGTCTGGACCCGGAAATCGCTCGCGACTTCAGTAACGTCGGCCCGATGGTCCGTGCCAGCGGTCACGCCCGTGATACCCGCGCCGATCACCCGTTTGTCGGCTATGGCCTGCTGCCAATGGAAGTCCACAGCGAGCAGGGCTGCGACGTTATTTCCCGTCTGAAAGTGCGTATCAACGAAGTCTATACCGCGCTGAACATGATCGACTACGGTCTGGATAACCTGCCGGGTGGCCCACTGATGGTGGAAGGCTTTACCTACATTCCGCACCGCTTTGCGCTGGGCTTTGCCGAAGCGCCGCGCGGCGATGATATCCACTGGAGCATGACCGGCGACAACCAGAAGCTGTACCGCTGGCGCTGCCGTGCCGCGACCTACGCGAACTGGCCGACCCTGCGCTACATGCTGCGCGGCAACACCGTTTCCGATGCGCCGCTGATTATCGGTAGCCTCGACCCTTGCTACTCCTGTACCGACCGCATGACCGTGGTCGATGTGCGTAAGAAGAAGAGCAAAGTGGTGCCGTACAAAGAACTCGAGCGTTACAGCATTGAGCGTAAAAACTCGCCGCTGAAATAA", + "dna_sequence_length": 1710, + "functions": [ + "hydrogenase 3, large subunit" + ], + "id": "CDS_2684", + "location": [ + [ + "NC_000913", + 2846471, + "-", + 1710 + ] + ], + "md5": "8fbaa5bab150a31a4c8f248c1548245e", + "parent_gene": "", + "protein_md5": "3eac3c2263398f6d02c5588500b228f2", + "protein_translation": "MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNSPLK", + "protein_translation_length": 569, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008946" + ], + [ + "gene_synonym", + "ECK2717" + ], + [ + "gene_synonym", + "EcoGene:EG10477" + ], + [ + "gene_synonym", + "GI:16130629" + ], + [ + "gene_synonym", + "GeneID:948994" + ], + [ + "gene_synonym", + "JW2692" + ], + [ + "gene_synonym", + "NP_417202.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16430" + ], + [ + "gene_synonym", + "b2722" + ], + [ + "gene_synonym", + "hevD" + ], + [ + "gene_synonym", + "hycD" + ] + ], + "dna_sequence": "ATGAGTGTTTTATATCCGTTAATTCAGGCGCTGGTGTTATTTGCCGTTGCGCCGCTGCTCTCCGGTATAACCCGCGTGGCGCGCGCCCGCTTGCATAACCGTCGCGGGCCGGGCGTGTTGCAGGAGTATCGCGACATTATCAAACTGCTGGGGCGTCAGAGCGTCGGCCCGGATGCCTCCGGCTGGGTGTTCCGCCTGACGCCGTATGTGATGGTGGGCGTCATGCTGACTATCGCTACTGCGCTGCCGGTGGTGACCGTCGGTTCTCCGCTGCCGCAACTGGGTGATTTGATCACCTTACTGTATCTCTTTGCCATCGCGCGTTTCTTCTTTGCCATTTCTGGTCTGGATACCGGTAGCCCGTTTACCGCTATCGGCGCGAGCCGTGAAGCGATGCTTGGCGTGCTGGTCGAACCGATGCTGCTGCTTGGTCTGTGGGTTGCCGCACAGGTTGCCGGTTCCACCAACATCAGCAACATCACCGACACCGTTTATCACTGGCCGCTGAGCCAGAGCATCCCGCTGGTACTGGCGCTTTGTGCCTGTGCGTTCGCCACCTTTATCGAAATGGGCAAACTGCCGTTCGACCTGGCGGAAGCCGAGCAGGAGCTGCAGGAAGGCCCGCTCTCTGAATACAGCGGCAGCGGCTTTGGCGTCATGAAATGGGGTATCAGCCTGAAACAGCTGGTGGTGTTGCAGATGTTCGTCGGGGTGTTTATTCCGTGGGGACAAATGGAAACCTTCACCGCCGGTGGACTGCTGCTGGCGCTGGTGATTGCCATCGTAAAACTGGTGGTCGGCGTCCTGGTTATCGCGCTGTTCGAAAACAGCATGGCCCGTCTGCGTCTTGATATTACTCCGCGCATTACCTGGGCTGGGTTTGGCTTTGCATTTTTAGCGTTCGTCTCCTTGCTGGCGGCGTGA", + "dna_sequence_length": 924, + "functions": [ + "hydrogenase 3, membrane subunit" + ], + "id": "CDS_2685", + "location": [ + [ + "NC_000913", + 2847412, + "-", + 924 + ] + ], + "md5": "fd3de4afdc7bca1aee9f3eceaf99fd1b", + "parent_gene": "", + "protein_md5": "72c36b819af33da167d851e4057394fd", + "protein_translation": "MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008948" + ], + [ + "gene_synonym", + "ECK2718" + ], + [ + "gene_synonym", + "EcoGene:EG10476" + ], + [ + "gene_synonym", + "GI:16130630" + ], + [ + "gene_synonym", + "GeneID:945327" + ], + [ + "gene_synonym", + "JW2693" + ], + [ + "gene_synonym", + "NP_417203.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16429" + ], + [ + "gene_synonym", + "b2723" + ], + [ + "gene_synonym", + "hevC" + ], + [ + "gene_synonym", + "hycC" + ] + ], + "dna_sequence": "ATGAGCGCAATTTCCCTGATCAATAGCGGCGTGGCGTGGTTTGTCGCCGCCGCTGTTCTGGCATTTCTCTTTTCTTTTCAAAAAGCGTTAAGTGGCTGGATAGCTGGAATTGGCGGCGCGGTTGGTAGTCTGTATACGGCAGCCGCGGGCTTCACTGTACTGACTGGCGCGGTTGGCGTGAGCGGTGCGCTGTCGCTGGTAAGCTACGATGTGCAAATCTCTCCGCTTAACGCGATTTGGCTGATTACGCTCGGTCTGTGCGGTCTGTTTGTCAGCCTCTACAACATTGACTGGCATCGCCACGCGCAGGTGAAGTGCAACGGCTTGCAGATCAATATGTTGATGGCTGCCGCCGTCTGCGCCGTCATTGCCAGCAACCTCGGCATGTTCGTGGTAATGGCCGAAATCATGGCCCTGTGCGCGGTGTTCCTCACCAGCAACAGCAAAGAGGGCAAACTGTGGTTTGCGCTGGGGCGTCTTGGCACTCTGCTGCTGGCGATTGCTTGCTGGCTGCTGTGGCAGCGTTACGGCACGCTGGATCTGCGCCTGCTGGATATGCGTATGCAACAGCTGCCGCTCGGTTCCGATATCTGGCTGCTCGGAGTGATTGGCTTTGGCCTGCTGGCCGGGATTATTCCGCTGCACGGCTGGGTGCCGCAGGCACATGCGAACGCCTCTGCGCCAGCTGCCGCGTTGTTTTCTACGGTAGTCATGAAAATTGGCCTGCTGGGCATTTTAACCCTGTCACTGCTGGGCGGTAATGCACCGCTGTGGTGGGGGATCGCGCTGCTGGTGCTCGGCATGATCACCGCGTTTGTCGGTGGTCTGTATGCGCTGGTGGAGCACAACATCCAGCGCCTGCTGGCTTACCACACCCTGGAAAATATCGGCATCATCCTGCTGGGGCTGGGCGCTGGCGTAACGGGTATCGCGCTCGAACAACCGGCGCTGATTGCTCTTGGCCTGGTCGGTGGTCTGTACCATCTGCTTAACCATAGCCTGTTCAAAAGCGTACTGTTCCTCGGGGCGGGGAGCGTCTGGTTCCGTACCGGTCATCGCGATATCGAAAAACTCGGTGGTATTGGCAAGAAAATGCCGGTTATCTCCATCGCCATGTTAGTCGGGCTGATGGCAATGGCTGCGCTGCCGCCGCTGAATGGTTTTGCCGGGGAATGGGTTATCTATCAATCATTTTTCAAACTGAGCAATAGTGGCGCGTTTGTTGCCCGTCTGCTGGGGCCGCTGCTCGCTGTGGGGCTGGCAATTACCGGTGCGCTGGCGGTGATGTGTATGGCGAAAGTCTATGGCGTCACGTTCCTCGGCGCGCCGCGCACCAAAGAAGCCGAAAACGCCACCTGTGCGCCGCTCCTGATGAGCGTAAGCGTAGTGGCACTGGCGATTTGCTGCGTAATTGGCGGTGTTGCTGCGCCGTGGCTACTGCCGATGCTCTCTGCTGCTGTACCTCTGCCGCTGGAGCCTGCTAACACCACCGTTTCTCAACCGATGATCACGTTGCTGCTGATTGCCTGCCCGCTGCTGCCATTCATCATTATGGCGATTTGCAAAGGCGATCGTTTGCCATCGCGTTCCCGCGGTGCGGCCTGGGTGTGCGGTTACGACCACGAAAAATCAATGGTGATTACCGCTCACGGTTTTGCCATGCCGGTGAAACAGGCGTTTGCGCCGGTGCTGAAACTACGCAAATGGCTGAATCCGGTGTCTCTGGTGCCGGGCTGGCAGTGCGAGGGGAGTGCGTTGCTGTTCCGCCGGATGGCGCTGGTTGAACTGGCGGTACTGGTGGTGATTATTGTTTCACGAGGAGCCTGA", + "dna_sequence_length": 1827, + "functions": [ + "hydrogenase 3, membrane subunit" + ], + "id": "CDS_2686", + "location": [ + [ + "NC_000913", + 2849241, + "-", + 1827 + ] + ], + "md5": "26f25ed44087aee020ad7160e9cdd3ee", + "parent_gene": "", + "protein_md5": "2753297d14c057f902f7bf6cbf69c567", + "protein_translation": "MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA", + "protein_translation_length": 608, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008950" + ], + [ + "gene_synonym", + "ECK2719" + ], + [ + "gene_synonym", + "EcoGene:EG10475" + ], + [ + "gene_synonym", + "GI:16130631" + ], + [ + "gene_synonym", + "GeneID:948002" + ], + [ + "gene_synonym", + "JW2694" + ], + [ + "gene_synonym", + "NP_417204.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAK1" + ], + [ + "gene_synonym", + "b2724" + ], + [ + "gene_synonym", + "hevB" + ], + [ + "gene_synonym", + "hycB" + ] + ], + "dna_sequence": "GTGAATCGTTTTGTAATTGCTGACTCCACGCTCTGTATCGGCTGCCACACTTGTGAGGCCGCCTGTTCAGAGACGCATCGCCAGCACGGCCTGCAATCAATGCCGCGCCTGAGAGTGATGCTGAATGAAAAAGAATCTGCGCCGCAGCTCTGTCACCACTGTGAAGATGCACCCTGCGCGGTGGTCTGCCCGGTTAACGCCATCACCCGCGTCGATGGGGCCGTGCAGTTGAATGAAAGCCTGTGCGTAAGCTGCAAGCTGTGCGGCATCGCCTGCCCGTTTGGCGCAATTGAATTTTCCGGCAGCCGTCCGCTGGATATTCCGGCAAACGCCAATACCCCGAAAGCGCCACCGGCACCGCCTGCTCCGGCGCGTGTCAGCACATTGCTTGACTGGGTGCCAGGTATTCGCGCGATCGCCGTCAAATGTGACCTTTGTAGCTTTGATGAACAAGGTCCGGCCTGCGTGCGGATGTGCCCGACTAAAGCCCTGCATCTGGTGGATAACACCGATATCGCCCGCGTCAGCAAACGTAAGCGTGAGCTGACCTTTAACACGGACTTTGGCGATCTCACCTTGTTTCAGCAGGCTCAAAGTGGAGAGGCTAAATGA", + "dna_sequence_length": 612, + "functions": [ + "hydrogenase 3, Fe-S subunit" + ], + "id": "CDS_2687", + "location": [ + [ + "NC_000913", + 2849849, + "-", + 612 + ] + ], + "md5": "32e15eb8748c9f229a17bc9a84eb3f06", + "parent_gene": "", + "protein_md5": "06a9c09d8a8b902904a8bcd7080524b0", + "protein_translation": "MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008952" + ], + [ + "gene_synonym", + "ECK2720" + ], + [ + "gene_synonym", + "EcoGene:EG10474" + ], + [ + "gene_synonym", + "GI:16130632" + ], + [ + "gene_synonym", + "GeneID:947193" + ], + [ + "gene_synonym", + "JW2695" + ], + [ + "gene_synonym", + "NP_417205.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEV4" + ], + [ + "gene_synonym", + "b2725" + ], + [ + "gene_synonym", + "hevA" + ], + [ + "gene_synonym", + "hycA" + ] + ], + "dna_sequence": "ATGACTATTTGGGAAATAAGCGAGAAAGCCGATTACATCGCACAGCGGCATCGTCGCCTACAGGACCAGTGGCACATCTACTGCAATTCGCTGGTTCAGGGGATCACGTTATCGAAAGCGCGCCTGCATCACGCCATGAGCTGCGCGCCGGACAAAGAACTCTGTTTCGTCCTTTTTGAACATTTTCGCATTTACGTCACCCTGGCGGATGGCTTTAACAGCCACACCATCGAGTATTACGTCGAAACAAAAGATGGCGAAGACAAACAGCGGATTGCGCAGGCGCAACTGAGCATTGACGGCATGATTGATGGCAAGGTCAACATCCGCGATCGCGAACAGGTTCTGGAACACTATCTCGAAAAAATCGCTGGCGTTTACGACAGCTTATACACCGCTATTGAAAACAATGTGCCGGTGAATTTAAGCCAACTGGTAAAGGGACAAAGCCCGGCAGCATGA", + "dna_sequence_length": 462, + "functions": [ + "regulator of the transcriptional regulator FhlA" + ], + "id": "CDS_2688", + "location": [ + [ + "NC_000913", + 2850435, + "-", + 462 + ] + ], + "md5": "1946818944cd042c737422335673de4c", + "parent_gene": "", + "protein_md5": "0767ce54ee39b8e281fcbd854dae8cc2", + "protein_translation": "MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGMIDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008958" + ], + [ + "gene_synonym", + "ECK2721" + ], + [ + "gene_synonym", + "EcoGene:EG10483" + ], + [ + "gene_synonym", + "GI:16130633" + ], + [ + "gene_synonym", + "GeneID:947195" + ], + [ + "gene_synonym", + "JW2696" + ], + [ + "gene_synonym", + "NP_417206.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A700" + ], + [ + "gene_synonym", + "b2726" + ], + [ + "gene_synonym", + "hypA" + ] + ], + "dna_sequence": "ATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAGCGTGGCGGAAGGTTGTAAACTGCACCTCGAAGAACAAGAGGCCGAATGCTGGTGTGAAACATGCCAACAGTATGTGACGCTACTGACCCAGCGCGTCCGCCGCTGTCCACAGTGTCATGGTGACATGCTGCAGATTGTGGCAGACGACGGTTTACAGATTCGGCGGATAGAAATAGACCAGGAGTGA", + "dna_sequence_length": 351, + "functions": [ + "protein involved in nickel insertion into hydrogenases 3" + ], + "id": "CDS_2689", + "location": [ + [ + "NC_000913", + 2850647, + "+", + 351 + ] + ], + "md5": "4602eb82dc5feec29847772f95fbb9f5", + "parent_gene": "", + "protein_md5": "e0ef488a5fde62cb45115f4e5aaf1c66", + "protein_translation": "MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008960" + ], + [ + "gene_synonym", + "ECK2722" + ], + [ + "gene_synonym", + "EcoGene:EG10484" + ], + [ + "gene_synonym", + "GI:16130634" + ], + [ + "gene_synonym", + "GeneID:947194" + ], + [ + "gene_synonym", + "JW2697" + ], + [ + "gene_synonym", + "NP_417207.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN3" + ], + [ + "gene_synonym", + "b2727" + ], + [ + "gene_synonym", + "hydB" + ], + [ + "gene_synonym", + "hydE" + ], + [ + "gene_synonym", + "hypB" + ] + ], + "dna_sequence": "ATGTGTACAACATGCGGTTGCGGTGAAGGCAACCTGTATATCGAGGGTGATGAACATAACCCTCATTCCGCGTTTCGTAGCGCGCCATTTGCCCCGGCGGCACGCCCGAAGATGAAAATCACCGGCATTAAAGCGCCTGAATTTACCCCCAGCCAGACTGAAGAAGGCGACCTGCATTACGGTCATGGCGAAGCGGGCACTCACGCACCGGGCATGAGCCAGCGTCGGATGCTGGAAGTCGAAATTGACGTGCTGGACAAAAATAACCGTCTGGCTGAACGCAACCGCGCGCGCTTTGCTGCCCGCAAGCAACTGGTGCTCAACCTGGTTTCCAGCCCTGGTTCCGGTAAAACCACCCTGCTGACGGAAACCCTAATGCGCCTGAAAGACAGCGTTCCGTGCGCAGTTATTGAAGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTGCTTTCCGTTACCGAAGGTGAAGACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTGATGCTGCTCAACAAAGTTGACCTGTTGCCGTATCTCAACTTTGACGTTGAAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATTGAAATCATCCTTATTTCCGCCACCAGCGGCGAAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAG", + "dna_sequence_length": 873, + "functions": [ + "GTP hydrolase involved in nickel liganding into hydrogenases" + ], + "id": "CDS_2690", + "location": [ + [ + "NC_000913", + 2851001, + "+", + 873 + ] + ], + "md5": "67de7617cb478f1717093f35cebed923", + "parent_gene": "", + "protein_md5": "8661b27e6c644be13f4028a3476702ef", + "protein_translation": "MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008962" + ], + [ + "gene_synonym", + "ECK2723" + ], + [ + "gene_synonym", + "EcoGene:EG10485" + ], + [ + "gene_synonym", + "GI:16130635" + ], + [ + "gene_synonym", + "GeneID:947192" + ], + [ + "gene_synonym", + "JW2698" + ], + [ + "gene_synonym", + "NP_417208.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAM3" + ], + [ + "gene_synonym", + "b2728" + ], + [ + "gene_synonym", + "hypC" + ] + ], + "dna_sequence": "ATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAA", + "dna_sequence_length": 273, + "functions": [ + "hydrogenase maturation protein" + ], + "id": "CDS_2691", + "location": [ + [ + "NC_000913", + 2851864, + "+", + 273 + ] + ], + "md5": "48eaf222d711ce58bcdfa597b4025a9b", + "parent_gene": "", + "protein_md5": "7d03db32baa353bf74d064d746359a3b", + "protein_translation": "MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008965" + ], + [ + "gene_synonym", + "ECK2724" + ], + [ + "gene_synonym", + "EcoGene:EG10486" + ], + [ + "gene_synonym", + "GI:16130636" + ], + [ + "gene_synonym", + "GeneID:947189" + ], + [ + "gene_synonym", + "JW2699" + ], + [ + "gene_synonym", + "NP_417209.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24192" + ], + [ + "gene_synonym", + "b2729" + ], + [ + "gene_synonym", + "hydF" + ], + [ + "gene_synonym", + "hypD" + ] + ], + "dna_sequence": "ATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACTGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAACAGGGATCGCTGTTGCAGGCAAAAGCACGCGGTGCCGATGTGCGCATCGTTTACTCGCCGATGGATGCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGAAACCACTATGCCGACCACCGCTATCACTCTGCAACAGGCGAAAGCGCGTGATGTGCAGAATTTTTACTTCTTCTGCCAGCACATTACGCTTATCCCGACGTTGCGCAGTTTGCTGGAACAGCCGGATAACGGTATCGATGCGTTCCTCGCGCCGGGTCACGTCAGTATGGTTATCGGCACCGACGCCTATAATTTTATCGCCAGCGATTTTCATCGTCCGCTGGTGGTTGCTGGATTCGAACCCCTTGATCTACTACAAGGCGTGGTCATGCTGGTGCAGCAGAAAATAGCGGCCCACAGCAAGGTAGAGAATCAGTATCGTCGAGTGGTACCGGATGCCGGTAACCTGCTGGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTATTAACGGGCAAATGTAAGCCGCATCAATGCCCGCTGTTTGGTAACACCTGTAATCCTCAAACCGCGTTTGGTGCGCTGATGGTTTCCTCCGAAGGAGCGTGCGCCGCGTGGTATCAGTATCGTCAGCAGGAGAGTGAAGCGTGA", + "dna_sequence_length": 1122, + "functions": [ + "hydrogenase maturation protein" + ], + "id": "CDS_2692", + "location": [ + [ + "NC_000913", + 2852136, + "+", + 1122 + ] + ], + "md5": "9599331b9b73b2520efdd4fbf1498897", + "parent_gene": "", + "protein_md5": "815550358607c5587918c2b33a9e0af4", + "protein_translation": "MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA", + "protein_translation_length": 373, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008967" + ], + [ + "gene_synonym", + "ECK2725" + ], + [ + "gene_synonym", + "EcoGene:EG10487" + ], + [ + "gene_synonym", + "GI:226524740" + ], + [ + "gene_synonym", + "GeneID:947182" + ], + [ + "gene_synonym", + "JW2700" + ], + [ + "gene_synonym", + "NP_417210.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24193" + ], + [ + "gene_synonym", + "b2730" + ], + [ + "gene_synonym", + "hydB" + ], + [ + "gene_synonym", + "hypE" + ] + ], + "dna_sequence": "GTGAATAATATCCAACTCGCCCACGGTAGCGGCGGCCAGGCGATGCAGCAATTAATCAACAGCCTGTTTATGGAAGCCTTTGCCAACCCGTGGCTGGCAGAGCAGGAAGATCAGGCACGTCTTGATCTGGCGCAGCTGGTAGCGGAAGGCGACCGTCTGGCGTTCTCCACCGACAGTTACGTTATTGACCCGCTGTTCTTCCCTGGCGGTAATATCGGCAAGCTGGCGATTTGCGGCACAGCCAATGACGTTGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTGCCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATGTATTGCTGGTGAGCGGTACACTCGGCGACCACGGGGCGACTATCCTTAACCTGCGTGAGCAGCTGGGGCTGGATGGCGAACTGGTCAGCGACTGCGCGGTGCTGACGCCGCTTATTCAGACGCTGCGTGACATTCCCGGCGTGAAAGCGCTGCGTGATGCCACCCGTGGTGGTGTAAACGCGGTGGTTCATGAGTTCGCGGCAGCCTGCGGTTGTGGTATTGAACTTTCAGAAGCGGCACTGCCTGTTAAACCTGCCGTGCGTGGCGTTTGCGAATTGCTGGGACTGGACGCCCTGAACTTTGCCAACGAAGGCAAACTAGTAATAGCTGTTGAACGCAACGCGGCAGAGCAAGTGCTGGCAGCGTTACATTCCCATCCACTGGGGAAAGACGCGGCGCTGATTGGTGAAGTGGTGGAACGTAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAA", + "dna_sequence_length": 1011, + "functions": [ + "carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein" + ], + "id": "CDS_2693", + "location": [ + [ + "NC_000913", + 2853254, + "+", + 1011 + ] + ], + "md5": "bb0995b577ee32d37c140e02276de08a", + "parent_gene": "", + "protein_md5": "e6243d74399253f6affb56e61fe6cb77", + "protein_translation": "MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008971" + ], + [ + "gene_synonym", + "ECK2726" + ], + [ + "gene_synonym", + "EcoGene:EG10301" + ], + [ + "gene_synonym", + "GI:16130638" + ], + [ + "gene_synonym", + "GeneID:947181" + ], + [ + "gene_synonym", + "JW2701" + ], + [ + "gene_synonym", + "NP_417211.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19323" + ], + [ + "gene_synonym", + "b2731" + ], + [ + "gene_synonym", + "fhl" + ], + [ + "gene_synonym", + "fhlA" + ] + ], + "dna_sequence": "ATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACGCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTTTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGTCGACTATGAGTTGTTATGCCGGGAACGCGATAACTTCCGCATCCTGGTCGCCATCACCAACGCGGTGCTTTCCCGCCTGGATATGGACGAACTGGTCAGCGAAGTCGCCAAAGAAATCCATTACTATTTCGACATTGACGATATCAGTATCGTCTTACGCAGCCACCGTAAAAACAAACTCAACATCTACTCCACTCACTATCTTGATAAACAGCATCCCGCCCACGAACAGAGCGAAGTCGATGAAGCCGGAACCCTCACCGAACGCGTGTTCAAAAGTAAAGAGATGCTGCTGATCAATCTCCACGAGCGGGACGATTTAGCCCCCTATGAACGCATGTTGTTCGACACCTGGGGCAACCAGATTCAAACCTTGTGCCTGTTACCGCTGATGTCTGGCGACACCATGCTGGGCGTGCTGAAACTGGCGCAATGCGAAGAGAAAGTGTTTACCACTACCAATCTGAATTTACTGCGCCAGATTGCCGAACGTGTGGCAATCGCTGTCGATAACGCCCTCGCCTATCAGGAAATCCATCGTCTGAAAGAACGGCTGGTTGATGAAAACCTCGCCCTGACCGAGCAGCTCAACAATGTTGATAGTGAATTTGGCGAGATTATTGGCCGCAGCGAAGCCATGTACAGCGTGCTTAAACAAGTTGAAATGGTGGCGCAAAGTGACAGTACCGTGCTGATCCTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCGCATGGTCAAAATGAACTGCGCGGCGATGCCTGCCGGATTGCTGGAAAGCGATCTGTTTGGTCATGAGCGTGGGGCTTTTACCGGTGCCAGCGCCCAGCGTATCGGTCGTTTTGAACTGGCGGATAAAAGCTCCCTGTTCCTCGACGAAGTGGGCGATATGCCACTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGAGTTTGAACGTCTCGGCAGCAACAAAATCATTCAGACGGACGTGCGTCTAATCGCCGCGACTAACCGCGATCTGAAAAAAATGGTCGCCGACCGTGAGTTCCGTAGCGATCTCTATTACCGCCTGAACGTATTCCCGATTCACCTGCCGCCACTACGCGAGCGTCCGGAAGATATTCCGCTGCTGGCGAAAGCCTTTACCTTCAAAATTGCCCGTCGTCTGGGGCGCAATATCGACAGCATTCCTGCCGAGACGCTGCGCACCTTGAGCAACATGGAGTGGCCGGGTAACGTACGCGAACTGGAAAACGTCATTGAGCGCGCGGTATTGCTAACACGCGGTAACGTGCTGCAGCTGTCATTGCCAGATATTGTTTTACCGGAACCTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCTGGAGGGCGAAGATGAATATCAGTTGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAA", + "dna_sequence_length": 2079, + "functions": [ + "formate hydrogenlyase transcriptional activator" + ], + "id": "CDS_2694", + "location": [ + [ + "NC_000913", + 2854338, + "+", + 2079 + ] + ], + "md5": "5bfe8c26b9d7c6ebc079a16ca42cce93", + "parent_gene": "", + "protein_md5": "d42a2c28fa2ed71c23f39232438062f5", + "protein_translation": "MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLDAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVALEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI", + "protein_translation_length": 692, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008973" + ], + [ + "gene_synonym", + "ECK2727" + ], + [ + "gene_synonym", + "EcoGene:EG11287" + ], + [ + "gene_synonym", + "GI:16130639" + ], + [ + "gene_synonym", + "GeneID:947187" + ], + [ + "gene_synonym", + "JW2702" + ], + [ + "gene_synonym", + "NP_417212.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25728" + ], + [ + "gene_synonym", + "b2732" + ], + [ + "gene_synonym", + "ygbA" + ] + ], + "dna_sequence": "ATGTCCGGCAAGCGTATCTCTCGTGAAAAACTGACGATTAAAAAAATGATCGATCTTTATCAAGCGAAATGCCCGCAGGCGTCAGCGGAGCCGGAGCATTACGAGGCGTTGTTTGTTTACGCGCAAAAGCGGCTGGATAAATGTGTGTTCGGCGAAGAGAAACCAGCCTGTAAGCAGTGTCCGGTGCACTGTTACCAGCCTGCAAAGCGTGAAGAGATGAAACAGATTATGCGTTGGGCCGGGCCGAGAATGCTGTGGCGTCATCCGATCTTAACCGTGCGTCATCTCATCGATGACAAGCGTCCGGTGCCAGAACTGCCGGAAAAATATCGTCCGAAAAAACCTCATGAATAG", + "dna_sequence_length": 354, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2695", + "location": [ + [ + "NC_000913", + 2856806, + "-", + 354 + ] + ], + "md5": "4746835f93272fed092fadc532968c6f", + "parent_gene": "", + "protein_md5": "687d7a57c0c238a46191b6eef0d1f544", + "protein_translation": "MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPHE", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008977" + ], + [ + "gene_synonym", + "ECK2728" + ], + [ + "gene_synonym", + "EcoGene:EG10625" + ], + [ + "gene_synonym", + "GI:16130640" + ], + [ + "gene_synonym", + "GeneID:947206" + ], + [ + "gene_synonym", + "JW2703" + ], + [ + "gene_synonym", + "NP_417213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23909" + ], + [ + "gene_synonym", + "ant" + ], + [ + "gene_synonym", + "b2733" + ], + [ + "gene_synonym", + "fdv" + ], + [ + "gene_synonym", + "mutS" + ], + [ + "gene_synonym", + "plm" + ] + ], + "dna_sequence": "ATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCGTCGCAACTGCTGGATATTTCACTGACCAAACGCGGTGCTTCGGCGGGAGAGCCGATCCCGATGGCGGGGATTCCCTACCATGCGGTGGAAAACTATCTCGCCAAACTGGTGAATCAGGGAGAGTCCGTTGCCATCTGCGAACAAATTGGCGATCCGGCGACCAGCAAAGGTCCGGTTGAGCGCAAAGTTGTGCGTATCGTTACGCCAGGCACCATCAGCGATGAAGCCCTGTTGCAGGAGCGTCAGGACAACCTGCTGGCGGCTATCTGGCAGGACAGCAAAGGTTTCGGCTACGCGACGCTGGATATCAGTTCCGGGCGTTTTCGCCTGAGCGAACCGGCTGACCGCGAAACGATGGCGGCAGAACTGCAACGCACTAATCCTGCGGAACTGCTGTATGCAGAAGATTTTGCTGAAATGTCGTTAATTGAAGGCCGTCGCGGCCTGCGCCGTCGCCCGCTGTGGGAGTTTGAAATCGACACCGCGCGCCAGCAGTTGAATCTGCAATTTGGGACCCGCGATCTGGTCGGTTTTGGCGTCGAGAACGCGCCGCGCGGACTTTGTGCTGCCGGTTGTCTGTTGCAGTATGCGAAAGATACCCAACGTACGACTCTGCCGCATATTCGTTCCATCACCATGGAACGTGAGCAGGACAGCATCATTATGGATGCCGCGACGCGTCGTAATCTGGAAATCACCCAGAACCTGGCGGGTGGTGCGGAAAATACGCTGGCTTCTGTGCTCGACTGCACCGTCACGCCGATGGGCAGCCGTATGCTGAAACGCTGGCTGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACGCTGAAAGTTGGCTTTAATGCGGTGCACGGCTACTACATTCAAATCAGCCGTGGGCAAAGCCATCTGGCACCCATCAACTACATGCGTCGCCAGACGCTGAAAAACGCCGAGCGCTACATCATTCCAGAGCTAAAAGAGTACGAAGATAAAGTTCTCACCTCAAAAGGCAAAGCACTGGCACTGGAAAAACAGCTTTATGAAGAGCTGTTCGACCTGCTGTTGCCGCATCTGGAAGCGTTGCAACAGAGCGCGAGCGCGCTGGCGGAACTCGACGTGCTGGTTAACCTGGCGGAACGGGCCTATACCCTGAACTACACCTGCCCGACCTTCATTGATAAACCGGGCATTCGCATTACCGAAGGTCGCCATCCGGTAGTTGAACAAGTACTGAATGAGCCATTTATCGCCAACCCGCTGAATCTGTCGCCGCAGCGCCGCATGTTGATCATCACCGGTCCGAACATGGGCGGTAAAAGTACCTATATGCGCCAGACCGCACTGATTGCGCTGATGGCCTACATCGGCAGCTATGTACCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCACTATTTCGAGCTGACCCAGTTACCGGAGAAAATGGAAGGCGTCGCTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCCGCTACGCAAGTGGATGGTACGCAAATGTCTTTGCTGTCAGTACCAGAAGAAACTTCGCCTGCGGTCGAAGCTCTGGAAAATCTTGATCCGGATTCACTCACCCCGCGTCAGGCGCTGGAGTGGATTTATCGCTTGAAGAGCCTGGTGTAA", + "dna_sequence_length": 2562, + "functions": [ + "methyl-directed mismatch repair protein" + ], + "id": "CDS_2696", + "location": [ + [ + "NC_000913", + 2857093, + "+", + 2562 + ] + ], + "md5": "c65ed2085bbb39730f233b8d041cb2c7", + "parent_gene": "", + "protein_md5": "28e4172f8c7880fea44fae13f316a7ae", + "protein_translation": "MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV", + "protein_translation_length": 853, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008980" + ], + [ + "gene_synonym", + "ECK2729" + ], + [ + "gene_synonym", + "EcoGene:EG13102" + ], + [ + "gene_synonym", + "GI:16130641" + ], + [ + "gene_synonym", + "GeneID:947196" + ], + [ + "gene_synonym", + "JW2704" + ], + [ + "gene_synonym", + "NP_417214.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55799" + ], + [ + "gene_synonym", + "b2734" + ], + [ + "gene_synonym", + "pphB" + ], + [ + "gene_synonym", + "prpB" + ], + [ + "gene_synonym", + "ygbH" + ] + ], + "dna_sequence": "ATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCGGTTAAAGGCAACCACGAAGCGATGGCGCTTGAGGCATTCGAAACTGGCGATGGCAATATGTGGCTTGCCAGCGGTGGTGACTGGTTTTTCGATTTAAATGATTCAGAGCAACAAGAGGCAATAGATCTGTTGCTGAAATTCCATCACCTTCCACATATTATTGAAATCACTAACGACAACATAAAATATGCCATCGCACATGCAGATTATCCGGGGAGTGAATATCTCTTTGGTAAAGAAATAGCGGAGAGCGAATTACTCTGGCCTGTTGATCGTGTGCAGAAATCGCTTAATGGCGAGTTACAACAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAG", + "dna_sequence_length": 657, + "functions": [ + "serine/threonine-specific protein phosphatase 2" + ], + "id": "CDS_2697", + "location": [ + [ + "NC_000913", + 2859760, + "+", + 657 + ] + ], + "md5": "514b1d037920218288249ae69a318aae", + "parent_gene": "", + "protein_md5": "d4e453d9cbe0441007daa8895990d55a", + "protein_translation": "MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPKIDLLISVGDNIDRGPESLDVLRLLNQPWFTSVKGNHEAMALEAFETGDGNMWLASGGDWFFDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYAIAHADYPGSEYLFGKEIAESELLWPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPNSGRLSFYKIK", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008982" + ], + [ + "gene_synonym", + "ECK2730" + ], + [ + "gene_synonym", + "EcoGene:EG13103" + ], + [ + "gene_synonym", + "GI:226524741" + ], + [ + "gene_synonym", + "GeneID:947204" + ], + [ + "gene_synonym", + "JW2705" + ], + [ + "gene_synonym", + "NP_417215.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52598" + ], + [ + "gene_synonym", + "b2735" + ], + [ + "gene_synonym", + "ygbI" + ] + ], + "dna_sequence": "TTGATACCCGTAGAGCGTCGCCAAATCATCCTTGAGATGGTAGCTGAAAAAGGCATTGTCAGTATTGCTGAACTAACGGACAGAATGAATGTGTCACATATGACCATTCGTCGGGATTTACAAAAACTGGAGCAGCAGGGAGCCGTTGTGCTGGTGTCCGGAGGCGTCCAGTCTCCGGGACGCGTGGCGCATGAACCTTCTCATCAGGTAAAAACTGCGCTGGCAATGACGCAAAAAGCGGCTATTGGCAAGCTGGCGGCAAGTCTTGTTCAGCCGGGAAGTTGTATCTATCTGGATGCGGGAACGACCACGTTAGCGATAGCACAGCATCTGATTCACATGGAGTCACTGACTGTGGTCACAAACGATTTCGTTATTGCGGACTACTTGCTCGACAACAGTAATTGCACAATTATTCACACTGGCGGTGCAGTGTGTCGGGAAAACCGTTCCTGTGTCGGGGAAGCCGCTGCGACCATGCTGCGCAGCCTGATGATTGATCAGGCTTTTATTTCTGCATCGTCATGGAGTGTGCGGGGGATTTCTACGCCAGCGGAAGATAAAGTCACGGTGAAACGGGCGATTGCCAGTGCCAGCCGCCAGCGAGTTTTGGTCTGTGATGCGACGAAATATGGTCAGGTGGCGACATGGCTGGCGTTACCATTAAGCGAGTTTGATCAGATTATTACAGACGACGGTTTGCCGGAGAGTGCCAGTCGCGCGCTGGTGAAGCAGGATCTCTCTTTGCTGGTAGCGAAAAATGAATAA", + "dna_sequence_length": 768, + "functions": [ + "DeoR family putative transcriptional regulator" + ], + "id": "CDS_2698", + "location": [ + [ + "NC_000913", + 2861234, + "-", + 768 + ] + ], + "md5": "ccc57553fc1b736894b07b98dcc99e38", + "parent_gene": "", + "protein_md5": "f19f7aaf3d3e50b8ee0101a20115e9d6", + "protein_translation": "MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRALVKQDLSLLVAKNE", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008986" + ], + [ + "gene_synonym", + "ECK2731" + ], + [ + "gene_synonym", + "EcoGene:EG13104" + ], + [ + "gene_synonym", + "GI:16130643" + ], + [ + "gene_synonym", + "GeneID:947200" + ], + [ + "gene_synonym", + "JW2706" + ], + [ + "gene_synonym", + "NP_417216.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46888" + ], + [ + "gene_synonym", + "b2736" + ], + [ + "gene_synonym", + "ygbJ" + ] + ], + "dna_sequence": "ATGAAAACGGGATCTGAGTTTCATGTCGGTATCGTTGGCTTAGGGTCAATGGGAATGGGAGCAGCACTGTCATATGTCCGCGCAGGTCTTTCTACCTGGGGCGCAGACCTGAACAGCAATGCCTGCGCTACGTTGAAAGAGGCAGGTGCTTGCGGGGTTTCTGATAACGCCGCGACGTTTGCCGAAAAACTGGACGCACTGCTGGTGCTGGTGGTCAATGCGGCCCAGGTTAAACAGGTGCTGTTTGGTGAAACAGGCGTTGCACAACATCTGAAACCCGGTACGGCAGTAATGGTTTCTTCCACTATCGCTAGTGCTGATGCGCAAGAAATTGCTACCGCTCTGGCTGGATTCGATCTGGAAATGCTGGATGCGCCAGTTTCTGGTGGTGCAGTAAAAGCCGCTAACGGTGAAATGACTGTCATGGCCTCCGGTAGCGATATTGCCTTTGAACGACTGGCACCCGTGCTGGAAGCCGTTGCCGGAAAAGTTTATCGCATAGGTGCAGAACCGGGACTAGGTTCGACCGTAAAAATTATTCACCAGTTGTTAGCGGGCGTACATATTGCTGCCGGAGCCGAAGCGATGGCACTTGCAGCCCGTGCGGGGATCCCGCTGGATGTGATGTATGACGTCGTGACCAATGCCGCCGGAAATTCCTGGATGTTCGAAAACCGGATGCGTCATGTGGTGGATGGCGATTACACCCCGCATTCAGCCGTCGATATTTTTGTTAAGGATCTTGGTCTGGTTGCCGATACAGCCAAAGCCCTGCACTTCCCGCTGCCATTGGCCTCAACAGCATTGAATATGTTCACCAGCGCCAGTAACGCGGGTTACGGGAAAGAAGACGATAGCGCAGTTATCAAGATTTTCTCTGGCATCACTCTACCGGGAGCGAAATCATGA", + "dna_sequence_length": 909, + "functions": [ + "putative dehydrogenase" + ], + "id": "CDS_2699", + "location": [ + [ + "NC_000913", + 2861430, + "+", + 909 + ] + ], + "md5": "0659e1b562a8eca67c38beb856c9fbbf", + "parent_gene": "", + "protein_md5": "e798d886807af415c977083436acd4ec", + "protein_translation": "MKTGSEFHVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGAKS", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008988" + ], + [ + "gene_synonym", + "ECK2732" + ], + [ + "gene_synonym", + "EcoGene:EG13105" + ], + [ + "gene_synonym", + "GI:16130644" + ], + [ + "gene_synonym", + "GeneID:947199" + ], + [ + "gene_synonym", + "JW2707" + ], + [ + "gene_synonym", + "NP_417217.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46889" + ], + [ + "gene_synonym", + "b2737" + ], + [ + "gene_synonym", + "ygbK" + ] + ], + "dna_sequence": "ATGATCAAGATTGGCGTTATCGCCGATGATTTTACCGGCGCGACGGATATCGCCAGTTTTCTGGTGGAAAACGGTCTACCAACGGTACAAATTAACGGTGTTCCAACAGGTAAAATGCCGGAAGCAATCGACGCACTGGTGATCAGCCTGAAAACGCGCTCCTGTCCAGTGGTTGAAGCCACACAGCAATCGCTGGCGGCTCTGAGCTGGTTGCAACAGCAAGGTTGCAAACAGATCTATTTCAAATACTGCTCTACTTTCGACAGTACGGCGAAAGGTAATATTGGCCCGGTTACCGATGCCTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGCCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTCAAGAGCTGGCTCGCTTACAGCAAGAGGGCTACCGCTACGCGGTGCTTGATGCGCTGACCGAACACCATCTGGAAATTCAGGGAGAAGCCTTGCGCGATGCCCCACTGGTAACGGGCGGTTCTGGTCTGGCGATTGGCCTGGCCCGGCAGTGGGCGCAAGAAAACGGTAACCAGGCTCGCAAAGCAGGGCGTCCGCTCGCTGGGCGCGGCGTAGTGCTCTCCGGTTCATGCTCTCAAATGACCAACCGCCAGGTAGCACATTACCGTCAAATTGCACCAGCCCGTGAAGTTGATGTGGCACGCTGCCTCTCAATTGAAACTCTGGCCGCTTATGCACACGAACTGGCAGAGTGGGTTCTGGGCCAGGAAAGTGTACTTGCTCCACTGGTTTTTGCCACCGCCAGCACTGACGCATTGGCAGCAATTCAACAGCAATACGGTGCACAAAAAGCCAGTCAGGCAGTAGAAACACTGTTTTCTCAACTAGCGGCGCGGTTAGCAGCGGAAGGCGTGACACGCTTTATTGTCGCAGGCGGTGAGACCTCCGGCGTAGTCACACAGAGCCTGGGAATAAAAGGGTTTCATATTGGCCCAACCATTTCCCCGGCGTGCCGTGGGTAA", + "dna_sequence_length": 1167, + "functions": [ + "FliA-regulated DUF1537 family protein" + ], + "id": "CDS_2700", + "location": [ + [ + "NC_000913", + 2862335, + "+", + 1167 + ] + ], + "md5": "2e98e63031ff6be9d1b95f3bc319125f", + "parent_gene": "", + "protein_md5": "05d8e0284b90c16b5f83556277c92997", + "protein_translation": "MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG", + "protein_translation_length": 388, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008994" + ], + [ + "gene_synonym", + "ECK2733" + ], + [ + "gene_synonym", + "EcoGene:EG13106" + ], + [ + "gene_synonym", + "GI:16130645" + ], + [ + "gene_synonym", + "GeneID:947197" + ], + [ + "gene_synonym", + "JW2708" + ], + [ + "gene_synonym", + "NP_417218.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46890" + ], + [ + "gene_synonym", + "b2738" + ], + [ + "gene_synonym", + "ygbL" + ] + ], + "dna_sequence": "ATGAGCGATTTCGCAAAAGTAGAGCAGTCTTTGCGAGAGGAGATGACGCGGATTGCCAGTTCATTCTTTCAGCGCGGCTATGCAACCGGTTCGGCTGGCAATCTGTCGCTGCTTTTACCTGACGGGAATTTACTGGCGACACCGACAGGTTCATGCCTGGGCAATCTCGATCCGCAGCGGCTTTCCAAAGTCGCCGCGGATGGCGAATGGTTAAGTGGTGACAAACCCTCGAAAGAGGTGCTCTTTCATCTGGCGCTGTATCGCAACAATCCGCGCTGTAAAGCGGTGGTGCATTTGCACAGCACATGGTCGACGGCGCTTTCCTGCCTGCAAGGGCTGGACAGCAGCAACGTTATTCGTCCGTTCACACCATACGTGGTGATGCGGATGGGAAATGTCCCGCTGGTGCCTTATTACCGACCGGGCGATAAACGCATCGCACAGGATCTGGCGGAACTGGCAGCAGACAATCAGGCTTTTTTACTGGCAAATCATGGCCCAGTGGTTTGCGGTGAAAGCCTGCAAGAAGCCGCCAACAATATGGAAGAGCTGGAGGAAACGGCAAAGCTGATTTTTATTCTCGGTGACCGCCCGATCCGTTATCTGACCGCAGGTGAAATTGCGGAATTAAGGAGTTAA", + "dna_sequence_length": 639, + "functions": [ + "putative class II aldolase" + ], + "id": "CDS_2701", + "location": [ + [ + "NC_000913", + 2863593, + "+", + 639 + ] + ], + "md5": "68f1e70fd033d43c6f4127d20b00da33", + "parent_gene": "", + "protein_md5": "fe2d49c088577750c4b7c90374c139bd", + "protein_translation": "MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008996" + ], + [ + "gene_synonym", + "ECK2734" + ], + [ + "gene_synonym", + "EcoGene:EG13107" + ], + [ + "gene_synonym", + "GI:16130646" + ], + [ + "gene_synonym", + "GeneID:947207" + ], + [ + "gene_synonym", + "JW2709" + ], + [ + "gene_synonym", + "NP_417219.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46891" + ], + [ + "gene_synonym", + "b2739" + ], + [ + "gene_synonym", + "ygbM" + ] + ], + "dna_sequence": "ATGCCTCGTTTTGCAGCTAATTTATCCATGATGTTCACCGAAGTGCCTTTTATTGAACGCTTCGCCGCAGCGCGAAAAGCCGGGTTCGATGCTGTGGAATTTCTGTTTCCCTATAACTACTCCACCCTGCAAATCCAAAAGCAACTGGAGCAAAACCATCTGACACTGGCGCTGTTCAATACCGCTCCCGGAGATATTAATGCGGGGGAATGGGGATTATCCGCCCTTCCCGGACGTGAGCACGAAGCACACGCAGACATCGACCTGGCACTGGAATATGCATTGGCGCTCAATTGTGAACAAGTCCATGTGATGGCAGGCGTCGTGCCCGCTGGCGAAGATGCTGAACGGTACCGGGCAGTATTTATCGATAATATCCGCTACGCTGCCGACCGCTTTGCGCCACACGGCAAGCGAATATTAGTTGAAGCACTCAGCCCCGGCGTTAAGCCTCATTATCTCTTCTCCAGCCAGTATCAGGCACTGGCTATTGTTGAAGAGGTTGCGCGAGATAACGTGTTTATTCAACTAGATACTTTTCATGCGCAAAAAGTAGATGGCAACCTGACGCATTTAATCCGCGACTACGCCGGGAAATATGCGCACGTACAAATTGCCGGACTACCTGATCGACATGAACCGGACGATGGAGAAATCAACTATCCGTGGCTGTTCCGCCTGTTCGATGAGGTGGGATATCAGGGCTGGATCGGTTGTGAATATAAACCTCGTGGCCTCACCGAAGAAGGGCTTGGCTGGTTTGACGCCTGGCGCTAA", + "dna_sequence_length": 777, + "functions": [ + "putative hydroxypyruvate isomerase" + ], + "id": "CDS_2702", + "location": [ + [ + "NC_000913", + 2864236, + "+", + 777 + ] + ], + "md5": "72c56e30b86ff56b92d8d47856eecd2b", + "parent_gene": "", + "protein_md5": "eb4ce960d43a3728fb560e741e854efb", + "protein_translation": "MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008999" + ], + [ + "gene_synonym", + "ECK2735" + ], + [ + "gene_synonym", + "EcoGene:EG13108" + ], + [ + "gene_synonym", + "GI:16130647" + ], + [ + "gene_synonym", + "GeneID:947208" + ], + [ + "gene_synonym", + "JW2710" + ], + [ + "gene_synonym", + "NP_417220.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46892" + ], + [ + "gene_synonym", + "b2740" + ], + [ + "gene_synonym", + "ygbN" + ] + ], + "dna_sequence": "ATGTCCACAATTACATTGTTATGCATTGCGTTAGCTGGCGTAATCATGCTGTTGCTGCTGGTCATCAAGGCAAAGGTACAACCATTCGTTGCTTTGCTCCTCGTCAGCCTGTTAGTCGCACTTGCGGCAGGTATACCGGCGGGCGAAGTGGGTAAAGTGATGATCGCCGGGATGGGCGGTGTGCTTGGTTCCGTCACTATTATTATTGGTCTGGGCGCTATGCTGGGGCGTATGATCGAACACTCTGGTGGTGCAGAGTCACTGGCTAATTATTTCAGTCGCAAGTTAGGTGACAAACGAACTATCGCTGCGCTGACTCTGGCAGCGTTCTTCCTCGGTATTCCCGTCTTCTTTGATGTCGGCTTTATTATTCTTGCGCCAATCATTTACGGTTTTGCCAAGGTTGCCAAAATATCGCCACTCAAATTTGGCCTGCCTGTCGCTGGGATCATGCTCACTGTTCACGTGGCGGTACCGCCGCATCCAGGCCCTGTCGCCGCAGCGGGGTTACTCCACGCAGACATCGGCTGGCTAACCATCATCGGTATTGCGATTTCTATTCCCGTAGGGGTTGTTGGCTACTTTGCAGCGAAAATAATCAATAAGCGCCAATATGCGATGTCAGTAGAAGTACTGGAACAGATGCAACTGGCTCCGGCCAGTGAGGAAGGCGCGACAAAATTAAGCGATAAAATAAATCCACCGGGCGTCGCGCTGGTCACCTCGCTAATTGTTATTCCTATCGCGATTATCATGGCGGGTACGGTTTCCGCAACACTGATGCCGCCTTCGCATCCCCTGCTTGGTACGCTACAGCTGATCGGCTCACCAATGGTAGCTCTAATGATTGCGCTGGTGCTGGCATTCTGGTTATTGGCTTTACGTCGCGGCTGGAGCTTACAACACACCAGCGACATTATGGGCTCAGCGCTTCCTACTGCGGCGGTAGTGATTTTGGTTACTGGTGCTGGAGGGGTATTTGGCAAAGTGCTGGTGGAATCGGGCGTCGGCAAAGCCCTTGCCAACATGCTACAAATGATTGACCTGCCTCTGTTACCAGCCGCATTTATTATTTCACTGGCGCTGCGTGCATCGCAGGGGTCAGCAACCGTAGCAATACTGACAACCGGCGGGTTACTCTCAGAAGCGGTGATGGGATTGAATCCGATTCAGTGCGTATTGGTGACGCTGGCAGCCTGCTTTGGTGGGCTTGGTGCGTCACATATTAATGACTCAGGGTTCTGGATTGTGACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGA", + "dna_sequence_length": 1365, + "functions": [ + "putative transporter" + ], + "id": "CDS_2703", + "location": [ + [ + "NC_000913", + 2865101, + "+", + 1365 + ] + ], + "md5": "301def19ee1d75192ea3eee10cba667d", + "parent_gene": "", + "protein_md5": "c46cc044abcf0b53e91c75ded33d4a87", + "protein_translation": "MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTIIGIAISIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009001" + ], + [ + "gene_synonym", + "ECK2736" + ], + [ + "gene_synonym", + "EcoGene:EG10510" + ], + [ + "gene_synonym", + "GI:16130648" + ], + [ + "gene_synonym", + "GeneID:947210" + ], + [ + "gene_synonym", + "JW5437" + ], + [ + "gene_synonym", + "NP_417221.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13445" + ], + [ + "gene_synonym", + "abrD" + ], + [ + "gene_synonym", + "appR" + ], + [ + "gene_synonym", + "b2741" + ], + [ + "gene_synonym", + "csi2" + ], + [ + "gene_synonym", + "dpeB" + ], + [ + "gene_synonym", + "katF" + ], + [ + "gene_synonym", + "nur" + ], + [ + "gene_synonym", + "otsX" + ], + [ + "gene_synonym", + "rpoS" + ], + [ + "gene_synonym", + "sigS" + ] + ], + "dna_sequence": "ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGAAAAGGCCTTAGTAGAACAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTGTGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCGCGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCGCCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGTTTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAACCAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCATAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTCGTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGATGAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAACGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTGAAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA", + "dna_sequence_length": 993, + "functions": [ + "RNA polymerase, sigma S (sigma 38) factor" + ], + "id": "CDS_2704", + "location": [ + [ + "NC_000913", + 2867551, + "-", + 993 + ] + ], + "md5": "5a554fa06d60e1c90dff89e1f530dae6", + "parent_gene": "", + "protein_md5": "7417edad24ebb41985e3a95878289efc", + "protein_translation": "MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009004" + ], + [ + "gene_synonym", + "ECK2737" + ], + [ + "gene_synonym", + "EcoGene:EG12111" + ], + [ + "gene_synonym", + "GI:16130649" + ], + [ + "gene_synonym", + "GeneID:947011" + ], + [ + "gene_synonym", + "JW2712" + ], + [ + "gene_synonym", + "NP_417222.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADA3" + ], + [ + "gene_synonym", + "b2742" + ], + [ + "gene_synonym", + "nlpD" + ] + ], + "dna_sequence": "ATGAGCGCGGGAAGCCCAAAATTCACCGTTCGCCGCATTGCGGCTTTGTCACTGGTTTCGCTATGGCTGGCAGGCTGTTCTGACACTTCAAATCCACCGGCACCGGTCAGCTCCGTTAATGGCAATGCGCCTGCAAATACTAATTCTGGTATGTTGATTACGCCGCCGCCGAAAATGGGGACGACGTCTACAGCGCAGCAACCGCAAATTCAGCCGGTGCAGCAGCCACAAATTCAGGCTACTCAACAACCGCAAATCCAGCCAGTGCAGCCAGTAGCTCAGCAGCCGGTACAGATGGAAAACGGACGCATCGTCTATAACCGTCAGTATGGGAACATTCCGAAAGGCAGTTATAGCGGCAGTACCTATACCGTGAAAAAAGGCGACACACTTTTCTATATCGCCTGGATTACTGGCAACGATTTCCGTGACCTTGCTCAGCGCAACAATATTCAGGCACCATACGCGCTGAACGTTGGTCAGACCTTGCAGGTGGGTAATGCTTCCGGTACGCCAATCACTGGCGGAAATGCCATTACCCAGGCCGACGCAGCAGAGCAAGGAGTTGTGATCAAGCCTGCACAAAATTCCACCGTTGCTGTTGCGTCGCAACCGACAATTACGTATTCTGAGTCTTCGGGTGAACAGAGTGCTAACAAAATGTTGCCGAACAACAAGCCAACTGCGACCACGGTCACAGCGCCTGTAACGGTACCAACAGCAAGCACAACCGAGCCGACTGTCAGCAGTACATCAACCAGTACGCCTATCTCCACCTGGCGCTGGCCGACTGAGGGCAAAGTGATCGAAACCTTTGGCGCTTCTGAGGGGGGCAACAAGGGGATTGATATCGCAGGCAGCAAAGGACAGGCAATTATCGCGACCGCAGATGGCCGCGTTGTTTATGCTGGTAACGCGCTGCGCGGCTACGGTAATCTGATTATCATCAAACATAATGATGATTACCTGAGTGCCTACGCCCATAACGACACAATGCTGGTCCGGGAACAACAAGAAGTTAAGGCGGGGCAAAAAATAGCGACCATGGGTAGCACCGGAACCAGTTCAACACGCTTGCATTTTGAAATTCGTTACAAGGGGAAATCCGTAAACCCGCTGCGTTATTTGCCGCAGCGATAA", + "dna_sequence_length": 1140, + "functions": [ + "activator of AmiC murein hydrolase activity, lipoprotein" + ], + "id": "CDS_2705", + "location": [ + [ + "NC_000913", + 2868753, + "-", + 1140 + ] + ], + "md5": "f4b6910bb55b75d376d5b7c3fe7f14a6", + "parent_gene": "", + "protein_md5": "4234d7b268b94820b26c4a45b8a10d98", + "protein_translation": "MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009006" + ], + [ + "gene_synonym", + "ECK2738" + ], + [ + "gene_synonym", + "EcoGene:EG10689" + ], + [ + "gene_synonym", + "GI:16130650" + ], + [ + "gene_synonym", + "GeneID:944923" + ], + [ + "gene_synonym", + "JW2713" + ], + [ + "gene_synonym", + "NP_417223.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7A5" + ], + [ + "gene_synonym", + "b2743" + ], + [ + "gene_synonym", + "pcm" + ] + ], + "dna_sequence": "ATGGTAAGCAGACGCGTACAAGCACTTCTGGATCAATTACGTGCGCAAGGTATTCAGGATGAGCAGGTGCTGAATGCACTTGCCGCCGTGCCGCGTGAAAAATTCGTTGATGAAGCGTTTGAACAAAAAGCCTGGGACAATATCGCTTTGCCGATAGGTCAGGGGCAGACAATTTCGCAGCCATATATGGTGGCGCGAATGACCGAATTACTCGAGCTGACGCCGCAGTCGCGGGTGCTGGAAATTGGCACCGGTTCGGGATATCAAACGGCAATCCTGGCGCATCTTGTCCAGCATGTTTGCTCGGTTGAACGGATTAAAGGCTTGCAGTGGCAGGCACGTCGCCGCCTGAAAAATCTTGATTTACATAATGTTTCAACCCGTCATGGCGATGGATGGCAAGGTTGGCAGGCACGTGCGCCGTTTGACGCTATCATTGTTACGGCGGCACCGCCGGAAATTCCAACTGCGCTAATGACGCAGCTGGACGAAGGCGGGATTCTCGTCTTACCCGTAGGGGAGGAGCACCAGTATTTGAAACGGGTGCGTCGTCGGGGAGGCGAATTTATTATCGATACCGTGGAGGCCGTGCGCTTTGTCCCTTTAGTGAAGGGTGAGCTGGCTTAA", + "dna_sequence_length": 627, + "functions": [ + "L-isoaspartate protein carboxylmethyltransferase type II" + ], + "id": "CDS_2706", + "location": [ + [ + "NC_000913", + 2869519, + "-", + 627 + ] + ], + "md5": "2c0fd54026b9fcda8064d07df029c1bb", + "parent_gene": "", + "protein_md5": "74dc26128b76215968daf2543c090ded", + "protein_translation": "MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009008" + ], + [ + "gene_synonym", + "ECK2739" + ], + [ + "gene_synonym", + "EcoGene:EG11817" + ], + [ + "gene_synonym", + "GI:16130651" + ], + [ + "gene_synonym", + "GeneID:947211" + ], + [ + "gene_synonym", + "JW2714" + ], + [ + "gene_synonym", + "NP_417224.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A840" + ], + [ + "gene_synonym", + "b2744" + ], + [ + "gene_synonym", + "surE" + ], + [ + "gene_synonym", + "umpG" + ], + [ + "gene_synonym", + "ygbC" + ] + ], + "dna_sequence": "ATGCGCATATTGCTGAGTAATGATGACGGGGTACATGCACCCGGTATACAAACGCTGGCGAAAGCCTTGCGTGAGTTTGCTGACGTTCAGGTGGTCGCCCCCGATCGTAACCGCAGCGGCGCTTCAAATTCTCTGACACTGGAATCCTCCCTGCGCACGTTTACCTTTGAAAATGGTGATATTGCTGTGCAAATGGGAACCCCGACCGATTGCGTCTATCTTGGCGTGAATGCTCTGATGCGTCCGCGCCCGGACATTGTTGTGTCCGGAATTAACGCCGGGCCGAATCTGGGGGATGATGTTATTTATTCCGGTACGGTAGCCGCCGCGATGGAAGGCCGTCATTTAGGTTTTCCGGCGCTTGCCGTCTCGCTTGACGGGCATAAACATTACGACACTGCCGCGGCGGTAACCTGTTCAATTTTGCGCGCACTGTGTAAAGAGCCGCTGCGCACCGGGCGTATTCTTAATATTAACGTTCCGGATTTACCCTTGGATCAAATCAAAGGTATTCGCGTGACGCGCTGCGGTACACGACATCCGGCAGATCAGGTGATCCCGCAGCAAGATCCGCGCGGCAATACGCTGTACTGGATTGGCCCGCCGGGCGGTAAATGTGATGCTGGTCCGGGGACCGATTTTGCTGCGGTAGATGAGGGCTATGTCTCCATCACGCCGCTGCATGTGGATTTAACTGCGCATAGCGCGCAAGATGTGGTTTCAGACTGGTTAAACAGCGTGGGAGTTGGCACGCAATGGTAA", + "dna_sequence_length": 762, + "functions": [ + "broad specificity 5'(3')-nucleotidase and polyphosphatase" + ], + "id": "CDS_2707", + "location": [ + [ + "NC_000913", + 2870274, + "-", + 762 + ] + ], + "md5": "206fbfc0b58f7054e8c2fca4e68c7ab5", + "parent_gene": "", + "protein_md5": "0856dc608b1d4b7dbbc35dee969c97f8", + "protein_translation": "MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009011" + ], + [ + "gene_synonym", + "ECK2740" + ], + [ + "gene_synonym", + "EcoGene:EG13109" + ], + [ + "gene_synonym", + "GI:16130652" + ], + [ + "gene_synonym", + "GeneID:947214" + ], + [ + "gene_synonym", + "JW2715" + ], + [ + "gene_synonym", + "NP_417225.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q57261" + ], + [ + "gene_synonym", + "b2745" + ], + [ + "gene_synonym", + "truD" + ], + [ + "gene_synonym", + "ygbO" + ] + ], + "dna_sequence": "ATGATTGAGTTTGATAATCTCACTTACCTCCACGGTAAACCGCAAGGCACCGGGCTGCTGAAAGCCAATCCGGAAGACTTTGTGGTGGTGGAAGATTTGGGCTTTGAGCCTGATGGTGAAGGTGAGCATATTCTGGTTAGAATCCTCAAAAACGGCTGCAATACCCGTTTTGTGGCGGATGCACTGGCGAAATTCCTGAAAATTCATGCCCGTGAAGTCAGCTTCGCTGGGCAAAAAGACAAACATGCTGTTACGGAACAGTGGTTATGCGCTCGCGTGCCGGGCAAGGAAATGCCCGATCTGAGCGCCTTTCAACTGGAAGGCTGCCAGGTGCTGGAGTATGCGCGGCACAAGCGCAAGCTGCGTTTAGGCGCGCTGAAAGGTAACGCCTTTACCCTGGTTCTGCGCGAAGTGAGCAATCGCGATGACGTTGAACAACGTCTGATCGATATTTGCGTAAAAGGTGTACCGAACTACTTCGGTGCCCAACGTTTTGGGATTGGCGGTAGCAACTTGCAGGGGGCGCAGCGCTGGGCGCAAACCAATACTCCGGTGCGCGATCGCAATAAACGGAGTTTTTGGTTGTCGGCAGCCCGCAGTGCGTTGTTTAATCAGATTGTTGCTGAGCGCCTCAAAAAAGCAGACGTTAATCAAGTTGTTGACGGCGATGCGCTACAATTAGCCGGACGTGGTAGCTGGTTTGTCGCAACCACCGAAGAACTGGCGGAATTACAGCGTCGCGTCAACGATAAAGAGTTGATGATAACCGCCGCATTGCCAGGCAGTGGCGAATGGGGAACTCAGCGTGAAGCGCTGGCATTCGAACAAGCAGCTGTCGCCGCAGAAACTGAATTACAAGCTTTACTGGTGCGCGAAAAAGTTGAAGCCGCGCGCAGAGCGATGCTGCTGTATCCGCAACAATTAAGCTGGAATTGGTGGGATGACGTCACCGTAGAGATCCGTTTCTGGCTTCCGGCGGGTAGTTTTGCAACCAGCGTTGTCAGGGAACTTATCAACACAACAGGTGATTATGCGCATATTGCTGAGTAA", + "dna_sequence_length": 1050, + "functions": [ + "tRNA(Glu) pseudouridine(13) synthase" + ], + "id": "CDS_2708", + "location": [ + [ + "NC_000913", + 2871304, + "-", + 1050 + ] + ], + "md5": "e4bf3af645c5fc2d63be1aec31c92e3c", + "parent_gene": "", + "protein_md5": "cc5959dd650c7d726086e66fefc68c5e", + "protein_translation": "MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009013" + ], + [ + "gene_synonym", + "ECK2741" + ], + [ + "gene_synonym", + "EcoGene:EG11816" + ], + [ + "gene_synonym", + "GI:16130653" + ], + [ + "gene_synonym", + "GeneID:945057" + ], + [ + "gene_synonym", + "JW2716" + ], + [ + "gene_synonym", + "NP_417226.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62617" + ], + [ + "gene_synonym", + "b2746" + ], + [ + "gene_synonym", + "ispF" + ], + [ + "gene_synonym", + "ygbB" + ] + ], + "dna_sequence": "ATGCGAATTGGACACGGTTTTGACGTACATGCCTTTGGCGGTGAAGGCCCAATTATCATTGGTGGCGTACGCATTCCTTACGAAAAAGGATTGCTGGCGCATTCTGATGGCGACGTGGCGCTCCATGCGTTGACCGATGCATTGCTTGGCGCGGCGGCGCTGGGGGATATCGGCAAGCTGTTCCCGGATACCGATCCGGCATTTAAAGGTGCCGATAGCCGCGAGCTGCTACGCGAAGCCTGGCGTCGTATTCAGGCGAAGGGTTATACCCTTGGCAACGTCGATGTCACTATCATCGCTCAGGCACCGAAGATGTTGCCGCACATTCCACAAATGCGCGTGTTTATTGCCGAAGATCTCGGCTGCCATATGGATGATGTTAACGTGAAAGCCACTACTACGGAAAAACTGGGATTTACCGGACGTGGGGAAGGGATTGCCTGTGAAGCGGTGGCGCTACTCATTAAGGCAACAAAATGA", + "dna_sequence_length": 480, + "functions": [ + "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" + ], + "id": "CDS_2709", + "location": [ + [ + "NC_000913", + 2871780, + "-", + 480 + ] + ], + "md5": "7db708a0ed6554368fd576f116ce1722", + "parent_gene": "", + "protein_md5": "1474cda41f35e53ff58f26dc76c9adc5", + "protein_translation": "MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009017" + ], + [ + "gene_synonym", + "ECK2742" + ], + [ + "gene_synonym", + "EcoGene:EG13110" + ], + [ + "gene_synonym", + "GI:16130654" + ], + [ + "gene_synonym", + "GeneID:948269" + ], + [ + "gene_synonym", + "JW2717" + ], + [ + "gene_synonym", + "NP_417227.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46893" + ], + [ + "gene_synonym", + "b2747" + ], + [ + "gene_synonym", + "ispD" + ], + [ + "gene_synonym", + "ygbP" + ] + ], + "dna_sequence": "ATGGCAACCACTCATTTGGATGTTTGCGCCGTGGTTCCGGCGGCCGGATTTGGCCGTCGAATGCAAACGGAATGTCCTAAGCAATATCTCTCAATCGGTAATCAAACCATTCTTGAACACTCGGTGCATGCGCTGCTGGCGCATCCCCGGGTGAAACGTGTCGTCATTGCCATAAGTCCTGGCGATAGCCGTTTTGCACAACTTCCTCTGGCGAATCATCCGCAAATCACCGTTGTAGATGGCGGTGATGAGCGTGCCGATTCCGTGCTGGCAGGTCTGAAAGCCGCTGGCGACGCGCAGTGGGTATTGGTGCATGACGCCGCTCGTCCTTGTTTGCATCAGGATGACCTCGCGCGATTGTTGGCGTTGAGCGAAACCAGCCGCACGGGGGGGATCCTCGCCGCACCAGTGCGCGATACTATGAAACGTGCCGAACCGGGCAAAAATGCCATTGCTCATACCGTTGATCGCAACGGCTTATGGCACGCGCTGACGCCGCAATTTTTCCCTCGTGAGCTGTTACATGACTGTCTGACGCGCGCTCTAAATGAAGGCGCGACTATTACCGACGAAGCCTCGGCGCTGGAATATTGCGGATTCCATCCTCAGTTGGTCGAAGGCCGTGCGGATAACATTAAAGTCACGCGCCCGGAAGATTTGGCACTGGCCGAGTTTTACCTCACCCGAACCATCCATCAGGAGAATACATAA", + "dna_sequence_length": 711, + "functions": [ + "4-diphosphocytidyl-2C-methyl-D-erythritol synthase" + ], + "id": "CDS_2710", + "location": [ + [ + "NC_000913", + 2872490, + "-", + 711 + ] + ], + "md5": "2c53f0e6c1635345ba0df0990c883dfc", + "parent_gene": "", + "protein_md5": "3aafe2206d465d52770b771f2cda519c", + "protein_translation": "MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009019" + ], + [ + "gene_synonym", + "ECK2743" + ], + [ + "gene_synonym", + "EcoGene:EG13111" + ], + [ + "gene_synonym", + "GI:16130655" + ], + [ + "gene_synonym", + "GeneID:946033" + ], + [ + "gene_synonym", + "JW2718" + ], + [ + "gene_synonym", + "NP_417228.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6S5" + ], + [ + "gene_synonym", + "b2748" + ], + [ + "gene_synonym", + "ftsB" + ], + [ + "gene_synonym", + "ygbQ" + ] + ], + "dna_sequence": "ATGGGTAAACTAACGCTGCTGTTGCTGGCTATTCTGGTCTGGCTACAGTATTCGCTGTGGTTCGGTAAGAACGGTATACATGACTATACCCGCGTCAATGATGATGTGGCGGCACAGCAAGCTACAAACGCGAAACTTAAAGCGCGAAACGATCAACTTTTTGCCGAAATTGACGATCTCAATGGCGGCCAGGAGGCGCTCGAAGAGCGTGCGCGTAATGAACTCAGCATGACCAGGCCGGGCGAAACTTTTTATCGTCTGGTGCCTGACGCGTCGAAGCGCGCACAGTCTGCGGGGCAAAACAATCGATAA", + "dna_sequence_length": 312, + "functions": [ + "cell division protein" + ], + "id": "CDS_2711", + "location": [ + [ + "NC_000913", + 2872820, + "-", + 312 + ] + ], + "md5": "6726c428568d5f3c42af555ffdadab94", + "parent_gene": "", + "protein_md5": "bee8a9d02e03015c15fe1ba853b07055", + "protein_translation": "MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009021" + ], + [ + "gene_synonym", + "ECK2744" + ], + [ + "gene_synonym", + "EcoGene:EG12707" + ], + [ + "gene_synonym", + "GI:16130656" + ], + [ + "gene_synonym", + "GeneID:947268" + ], + [ + "gene_synonym", + "JW2719" + ], + [ + "gene_synonym", + "NP_417229.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46141" + ], + [ + "gene_synonym", + "b2749" + ], + [ + "gene_synonym", + "ygbE" + ] + ], + "dna_sequence": "ATGCGTAATAGCCATAACATTACACTAACAAATAACGACAGCCTTACTGAGGATGAAGAAACCACATGGTCACTGCCTGGTGCCGTGGTCGGTTTTATCTCCTGGTTATTTGCGCTGGCGATGCCGATGTTGATTTATGGCTCTAACACGCTGTTCTTCTTTATCTACACCTGGCCTTTCTTTCTGGCGCTGATGCCCGTCGCGGTAGTGGTGGGGATTGCGCTGCATTCATTGATGGACGGAAAGCTACGCTACAGTATTGTTTTCACCCTGGTGACAGTAGGCATTATGTTTGGCGCACTGTTTATGTGGCTACTGGGCTAA", + "dna_sequence_length": 324, + "functions": [ + "DUF3561 family inner membrane protein" + ], + "id": "CDS_2712", + "location": [ + [ + "NC_000913", + 2873337, + "-", + 324 + ] + ], + "md5": "e469f4e8b70eb258e9aff0c2514fa217", + "parent_gene": "", + "protein_md5": "e2b987a10d0bacc61f47994a9bbc71b2", + "protein_translation": "MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009023" + ], + [ + "gene_synonym", + "ECK2745" + ], + [ + "gene_synonym", + "EcoGene:EG10185" + ], + [ + "gene_synonym", + "GI:16130657" + ], + [ + "gene_synonym", + "GeneID:947221" + ], + [ + "gene_synonym", + "JW2720" + ], + [ + "gene_synonym", + "NP_417230.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6J1" + ], + [ + "gene_synonym", + "b2750" + ], + [ + "gene_synonym", + "cysC" + ] + ], + "dna_sequence": "ATGGCGCTGCATGACGAAAACGTCGTCTGGCATAGCCATCCGGTCACTGTGCAACAACGCGAGCTACACCACGGTCATCGTGGTGTAGTGCTGTGGTTTACCGGCCTCTCCGGGTCCGGTAAATCAACGGTCGCCGGGGCGCTGGAGGAGGCGTTACATAAACTCGGCGTCAGTACGTATCTGCTGGATGGCGACAATGTTCGCCACGGATTATGCAGCGATCTCGGTTTTAGCGATGCCGATCGTAAAGAGAATATCCGTCGCGTCGGTGAAGTGGCGAATTTGATGGTTGAAGCCGGACTGGTGGTGCTGACCGCATTTATCTCGCCACACCGCGCCGAACGCCAGATGGTTCGCGAACGCGTAGGAGAAGGGCGCTTTATCGAAGTGTTTGTCGATACGCCGCTGGCGATTTGCGAAGCCCGCGATCCCAAAGGCTTATATAAGAAAGCGCGTGCCGGTGAACTGCGCAACTTTACGGGAATAGATTCCGTTTACGAAGCGCCTGAATCGGCAGAAATTCATCTCAATGGTGAACAATTAGTAACAAATTTGGTACAGCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGA", + "dna_sequence_length": 606, + "functions": [ + "adenosine 5'-phosphosulfate kinase" + ], + "id": "CDS_2713", + "location": [ + [ + "NC_000913", + 2873992, + "-", + 606 + ] + ], + "md5": "4ad04fd875db4143aae6a150b71f7b4b", + "parent_gene": "", + "protein_md5": "e76736719b951c91dc283a3fd5205c58", + "protein_translation": "MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009026" + ], + [ + "gene_synonym", + "ECK2746" + ], + [ + "gene_synonym", + "EcoGene:EG10194" + ], + [ + "gene_synonym", + "GI:16130658" + ], + [ + "gene_synonym", + "GeneID:947219" + ], + [ + "gene_synonym", + "JW2721" + ], + [ + "gene_synonym", + "NP_417231.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23845" + ], + [ + "gene_synonym", + "b2751" + ], + [ + "gene_synonym", + "cysN" + ] + ], + "dna_sequence": "ATGAACACCGCACTTGCACAACAAATCGCCAATGAAGGCGGCGTCGAAGCCTGGATGATTGCGCAACAACATAAAAGCCTGCTGCGTTTTCTGACCTGTGGTAGCGTCGATGACGGCAAAAGTACTCTGATTGGTCGTCTGCTGCACGATACCCGCCAAATCTACGAAGATCAGCTCTCATCGCTGCATAACGACAGTAAGCGTCACGGCACCCAGGGCGAAAAGCTGGATCTGGCTCTGCTGGTGGACGGCCTGCAAGCTGAGCGCGAACAGGGCATCACCATTGACGTGGCCTACCGCTATTTCTCTACCGAGAAGCGTAAATTTATTATCGCCGACACCCCAGGGCACGAGCAGTACACCCGCAATATGGCGACTGGCGCATCGACATGTGAACTGGCGATCTTACTGATCGATGCCCGTAAAGGCGTGCTCGATCAAACCCGTCGTCACAGTTTTATCTCCACACTGTTGGGGATCAAACATCTGGTCGTGGCGATCAACAAAATGGATCTGGTGGATTACAGTGAAGAGACGTTCACCCGTATTCGTGAAGATTATTTGACCTTTGCCGGGCAGCTGCCGGGTAATCTGGATATCCGCTTTGTGCCGCTCTCTGCACTGGAAGGCGACAACGTGGCATCGCAAAGTGAAAGTATGCCGTGGTACAGCGGTCCGACACTGCTCGAAGTGCTGGAAACCGTGGAGATCCAGCGAGTGGTGGATGCTCAGCCAATGCGCTTCCCGGTGCAGTACGTTAATCGCCCGAATCTCGATTTTCGTGGTTACGCCGGAACGCTGGCATCCGGTCGCGTGGAAGTCGGGCAACGTGTCAAAGTGCTGCCCTCTGGTGTGGAATCAAACGTCGCGCGGATCGTGACTTTTGATGGTGATCGCGAAGAAGCCTTTGCCGGAGAAGCGATCACCCTGGTGCTGACGGATGAGATCGACATCAGCCGTGGCGATCTGCTGCTGGCGGCAGACGAAGCGTTACCGGCGGTGCAGAGCGCGTCGGTGGATGTGGTATGGATGGCGGAACAGCCGCTTTCTCCAGGGCAGAGTTACGACATCAAAATTGCCGGTAAGAAGACGCGCGCGCGTGTTGATGGCATTCGCTATCAGGTTGATATTAATAACCTTACCCAGCGTGAAGTTGAAAACCTGCCACTGAATGGGATCGGCCTCGTGGATCTCACTTTTGACGAGCCGCTGGTGTTAGATCGTTATCAACAAAATCCGGTGACGGGTGGGCTGATTTTTATCGATCGCCTGAGCAATGTGACCGTGGGTGCCGGTATGGTGCACGAGCCAGTTAGCCAGGCAACTGCTGCGCCATCTGAATTCAGTGCATTCGAACTGGAATTGAATGCTCTGGTTCGTCGCCACTTTCCGCACTGGGGCGCGCGCGATTTGCTGGGGGATAAATAA", + "dna_sequence_length": 1428, + "functions": [ + "sulfate adenylyltransferase, subunit 1" + ], + "id": "CDS_2714", + "location": [ + [ + "NC_000913", + 2875419, + "-", + 1428 + ] + ], + "md5": "0d6d9077184f955ae203dfd9a2314753", + "parent_gene": "", + "protein_md5": "7b018704e074fee34e7a5f6016618c09", + "protein_translation": "MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009029" + ], + [ + "gene_synonym", + "ECK2747" + ], + [ + "gene_synonym", + "EcoGene:EG10186" + ], + [ + "gene_synonym", + "GI:16130659" + ], + [ + "gene_synonym", + "GeneID:947217" + ], + [ + "gene_synonym", + "JW2722" + ], + [ + "gene_synonym", + "NP_417232.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21156" + ], + [ + "gene_synonym", + "b2752" + ], + [ + "gene_synonym", + "cysD" + ] + ], + "dna_sequence": "ATGGATCAAATACGACTTACTCACCTGCGGCAACTGGAGGCGGAAAGCATCCACATTATTCGCGAGGTGGCGGCAGAATTCTCAAATCCGGTGATGCTCTACTCTATCGGTAAAGATTCCAGCGTCATGCTGCATCTGGCGCGCAAGGCGTTTTATCCAGGTACGCTGCCTTTCCCGTTGCTGCATGTCGATACCGGCTGGAAATTCCGCGAGATGTATGAGTTCCGCGATCGTACTGCTAAAGCCTACGGCTGCGAACTGCTGGTGCATAAAAACCCGGAAGGCGTGGCGATGGGGATTAATCCATTCGTGCACGGCAGCGCGAAACATACCGATATTATGAAAACTGAAGGCCTGAAACAGGCGCTGAACAAATACGGTTTTGATGCCGCCTTCGGTGGTGCGCGCCGTGACGAAGAGAAATCCCGCGCTAAAGAGCGAATTTACTCTTTCCGTGACCGCTTCCATCGCTGGGATCCGAAAAATCAGCGCCCGGAGCTGTGGCACAACTACAACGGGCAAATTAACAAAGGCGAAAGCATCCGCGTCTTCCCGCTCTCTAACTGGACCGAGCAGGATATCTGGCAATACATCTGGCTGGAAAATATCGACATTGTTCCGCTATATCTCGCTGCGGAACGTCCGGTTCTGGAACGCGACGGTATGTTGATGATGATTGATGACAACCGTATCGACCTGCAACCGGGCGAAGTGATTAAAAAACGGATGGTGCGTTTCCGTACGCTGGGCTGCTGGCCGCTGACCGGTGCGGTGGAGTCAAATGCACAAACACTGCCGGAAATCATCGAAGAGATGCTGGTTTCCACCACCAGTGAACGTCAGGGCCGCGTGATTGACCGCGACCAGGCGGGGTCTATGGAGCTGAAAAAACGTCAGGGGTATTTTTAA", + "dna_sequence_length": 909, + "functions": [ + "sulfate adenylyltransferase, subunit 2" + ], + "id": "CDS_2715", + "location": [ + [ + "NC_000913", + 2876329, + "-", + 909 + ] + ], + "md5": "76589efa302ef10026e7fd8f3a3e3322", + "parent_gene": "", + "protein_md5": "1086d0197327cf387ccba41b7da9b310", + "protein_translation": "MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009033" + ], + [ + "gene_synonym", + "ECK2748" + ], + [ + "gene_synonym", + "EcoGene:EG10488" + ], + [ + "gene_synonym", + "GI:16130660" + ], + [ + "gene_synonym", + "GeneID:947215" + ], + [ + "gene_synonym", + "JW2723" + ], + [ + "gene_synonym", + "NP_417233.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10423" + ], + [ + "gene_synonym", + "b2753" + ], + [ + "gene_synonym", + "iap" + ] + ], + "dna_sequence": "ATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAGGCGCTGAGAATTTACTCAAGCGGATGAGTGACACCGAAAAGAAAAATACGCTGCTGGTGATTAATCTCGATAACTTAATTGTTGGCGATAAATTGTATTTCAACAGCGGTGTAAAAACCCCTGAGGCAGTAAGGAAATTAACGCGCGACAGGGCGCTGGCAATTGCGCGCAGTCACGGAATAGCCGCAACGACCAATCCGGGTTTGAATAAAAATTATCCGAAAGGCACTGGGTGTTGTAATGACGCAGAAATATTCGACAAAGCGGGCATTGCTGTACTTTCGGTGGAAGCGACTAACTGGAATCTTGGGAATAAGGATGGTTATCAGCAACGCGCAAAAACACCTGCCTTCCCGGCGGGAAATAGCTGGCATGACGTAAGACTGGATAATCACCAACATATTGATAAGGCTCTTCCTGGAAGAATAGAACGTCGCTGCCGTGACGTTATGCGGATAATGCTACCTCTGGTGAAGGAGTTGGCGAAGGCGTCTTGA", + "dna_sequence_length": 1038, + "functions": [ + "aminopeptidase in alkaline phosphatase isozyme conversion" + ], + "id": "CDS_2716", + "location": [ + [ + "NC_000913", + 2876581, + "+", + 1038 + ] + ], + "md5": "27684ed4db3e72179ea77e1df2561d63", + "parent_gene": "", + "protein_md5": "e46ac4b63d49f23165165f8fa15d32ab", + "protein_translation": "MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009036" + ], + [ + "gene_synonym", + "ECK2749" + ], + [ + "gene_synonym", + "EcoGene:EG12845" + ], + [ + "gene_synonym", + "GI:90111482" + ], + [ + "gene_synonym", + "GeneID:947213" + ], + [ + "gene_synonym", + "JW5438" + ], + [ + "gene_synonym", + "NP_417234.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45956" + ], + [ + "gene_synonym", + "b2754" + ], + [ + "gene_synonym", + "cas2" + ], + [ + "gene_synonym", + "ygbF" + ] + ], + "dna_sequence": "ATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAAACGGGATTTGAGTTCCAGACATTTGGGTTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGA", + "dna_sequence_length": 285, + "functions": [ + "CRISPR adaptation ssRNA endonuclease" + ], + "id": "CDS_2717", + "location": [ + [ + "NC_000913", + 2878853, + "-", + 285 + ] + ], + "md5": "d4c477ef1e543a28ac3b66959f1ec134", + "parent_gene": "", + "protein_md5": "158529f765b5535e806e79519444a89a", + "protein_translation": "MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009038" + ], + [ + "gene_synonym", + "ECK2750" + ], + [ + "gene_synonym", + "EcoGene:EG13114" + ], + [ + "gene_synonym", + "GI:16130662" + ], + [ + "gene_synonym", + "GeneID:947228" + ], + [ + "gene_synonym", + "JW2725" + ], + [ + "gene_synonym", + "NP_417235.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46896" + ], + [ + "gene_synonym", + "b2755" + ], + [ + "gene_synonym", + "cas1" + ], + [ + "gene_synonym", + "ygbT" + ] + ], + "dna_sequence": "ATGACCTGGCTTCCCCTTAATCCCATTCCACTCAAAGATCGCGTCTCCATGATCTTTCTGCAATATGGGCAGATCGATGTAATAGATGGCGCGTTTGTACTTATCGACAAGACAGGGATCCGCACTCATATTCCTGTTGGCTCGGTTGCCTGCATCATGCTGGAACCTGGTACACGGGTTTCGCATGCAGCTGTACGCCTGGCTGCGCAAGTTGGAACATTGTTGGTATGGGTGGGGGAAGCGGGCGTTCGTGTTTATGCTTCTGGTCAGCCTGGAGGTGCGCGTTCAGATAAGCTGCTCTATCAGGCAAAACTTGCTCTGGATGAAGATTTGCGTCTGAAGGTCGTACGTAAAATGTTTGAACTTCGGTTTGGAGAACCTGCGCCTGCCCGGCGCTCCGTAGAGCAACTCAGAGGTATAGAAGGCAGTCGCGTGCGGGCAACCTACGCACTTCTGGCGAAGCAATACGGCGTGACATGGAATGGACGTCGCTACGATCCGAAAGACTGGGAAAAGGGCGATACGATCAACCAATGCATTAGCGCTGCAACTTCCTGTTTATACGGCGTAACTGAAGCGGCGATACTTGCAGCTGGTTATGCACCAGCTATTGGGTTTGTGCATACAGGAAAGCCTCTTTCCTTTGTTTACGATATTGCAGACATCATTAAATTTGACACTGTTGTACCGAAAGCTTTTGAGATAGCGCGTCGTAACCCTGGTGAGCCGGACCGGGAAGTCCGTTTGGCGTGCAGGGATATTTTTCGCAGTAGTAAAACATTAGCCAAATTGATTCCGCTTATAGAGGACGTGCTTGCCGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGA", + "dna_sequence_length": 918, + "functions": [ + "multifunctional endonuclease Cas1, CRISPR adaptation protein", + "DNA repair enzyme" + ], + "id": "CDS_2718", + "location": [ + [ + "NC_000913", + 2879772, + "-", + 918 + ] + ], + "md5": "06ce46927cf52779bdef949cfdb2eb01", + "parent_gene": "", + "protein_md5": "af7302e3205daf5bbe4f76dc4289bd08", + "protein_translation": "MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009042" + ], + [ + "gene_synonym", + "ECK2751" + ], + [ + "gene_synonym", + "EcoGene:EG13115" + ], + [ + "gene_synonym", + "GI:16130663" + ], + [ + "gene_synonym", + "GeneID:947226" + ], + [ + "gene_synonym", + "JW2726" + ], + [ + "gene_synonym", + "NP_417236.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46897" + ], + [ + "gene_synonym", + "b2756" + ], + [ + "gene_synonym", + "cas6e" + ], + [ + "gene_synonym", + "casE" + ], + [ + "gene_synonym", + "cse3" + ], + [ + "gene_synonym", + "ygcH" + ] + ], + "dna_sequence": "ATGTATCTCAGTAAAGTCATCATTGCCAGGGCCTGGAGCAGGGATCTTTACCAACTTCACCAGGGATTATGGCATTTATTTCCAAACAGACCGGATGCTGCTCGTGATTTTCTTTTTCATGTTGAGAAGCGAAACACACCAGAAGGCTGTCATGTTTTATTGCAGTCAGCGCAAATGCCTGTTTCAACTGCCGTTGCGACAGTCATTAAAACTAAACAGGTTGAATTTCAACTTCAGGTTGGTGTTCCACTCTATTTTCGGCTTCGGGCAAATCCGATCAAAACTATTCTCGACAATCAAAAGCGCCTGGACAGTAAAGGGAATATTAAACGCTGTCGGGTTCCGTTAATAAAAGAAGCAGAACAAATCGCGTGGTTGCAACGTAAATTGGGCAATGCGGCGCGCGTTGAAGATGTGCATCCCATATCGGAACGGCCACAGTATTTTTCTGGTGATGGTAAAAGTGGAAAGATCCAAACGGTTTGCTTTGAAGGTGTGCTCACCATCAACGACGCGCCAGCGTTAATAGATCTTGTACAGCAAGGTATTGGGCCAGCTAAATCGATGGGATGTGGCTTGCTATCTTTGGCTCCACTGTGA", + "dna_sequence_length": 600, + "functions": [ + "CRISPR RNA precursor cleavage enzyme", + "CRISP RNA (crRNA) containing Cascade antiviral complex protein" + ], + "id": "CDS_2719", + "location": [ + [ + "NC_000913", + 2880387, + "-", + 600 + ] + ], + "md5": "9506f9b8ac4f811ab0f2603b2f0ae82b", + "parent_gene": "", + "protein_md5": "d8fe9d94db8fdd58b00feb6183ef3156", + "protein_translation": "MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009044" + ], + [ + "gene_synonym", + "ECK2752" + ], + [ + "gene_synonym", + "EcoGene:EG13116" + ], + [ + "gene_synonym", + "GI:90111483" + ], + [ + "gene_synonym", + "GeneID:947225" + ], + [ + "gene_synonym", + "JW5844" + ], + [ + "gene_synonym", + "NP_417237.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46898" + ], + [ + "gene_synonym", + "b2757" + ], + [ + "gene_synonym", + "cas5" + ], + [ + "gene_synonym", + "casD" + ], + [ + "gene_synonym", + "ygcI" + ] + ], + "dna_sequence": "ATGAGATCTTATTTGATCTTGCGGCTTGCTGGGCCAATGCAAGCCTGGGGGCAGCCGACCTTTGAAGGAACGCGACCTACCGGAAGATTTCCGACCCGAAGCGGGTTATTAGGGCTACTCGGGGCTTGTCTTGGGATCCAACGTGATGATACTTCTTCATTACAGGCGTTATCAGAGAGTGTGCAATTTGCAGTGCGCTGCGATGAACTCATTCTTGACGATCGTCGTGTGTCTGTAACGGGGTTGCGTGATTACCATACAGTCCTTGGAGCGCGAGAAGATTACCGTGGTTTGAAAAGTCATGAAACGATTCAAACATGGCGCGAATATTTATGTGATGCCTCCTTTACCGTCGCTCTCTGGTTAACACCCCATGCAACGATGGTTATCTCAGAACTTGAAAAAGCAGTATTAAAGCCTCGGTATACACCTTACCTGGGGCGGAGAAGTTGCCCACTAACACACCCGCTTTTTTTGGGGACATGTCAGGCATCGGATCCTCAGAAGGCGCTATTAAATTATGAGCCCGTTGGCGGCGATATATATAGTGAGGAATCAGTTACAGGGCATCATTTAAAATTTACGGCGCGCGACGAACCGATGATCACCTTGCCTCGACAATTTGCTTCCCGAGAATGGTATGTGATTAAAGGAGGTATGGATGTATCTCAGTAA", + "dna_sequence_length": 675, + "functions": [ + "CRISP RNA (crRNA) containing Cascade antiviral complex protein" + ], + "id": "CDS_2720", + "location": [ + [ + "NC_000913", + 2881048, + "-", + 675 + ] + ], + "md5": "d145ba1bf6005d0d2759fd479ec9ddc5", + "parent_gene": "", + "protein_md5": "7e08b0e625ac18eec9090f0a765c0e70", + "protein_translation": "MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009046" + ], + [ + "gene_synonym", + "ECK2753" + ], + [ + "gene_synonym", + "EcoGene:EG13117" + ], + [ + "gene_synonym", + "GI:16130665" + ], + [ + "gene_synonym", + "GeneID:947224" + ], + [ + "gene_synonym", + "JW2728" + ], + [ + "gene_synonym", + "NP_417238.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46899" + ], + [ + "gene_synonym", + "b2758" + ], + [ + "gene_synonym", + "cas4" + ], + [ + "gene_synonym", + "cas7" + ], + [ + "gene_synonym", + "casC" + ], + [ + "gene_synonym", + "cse4" + ], + [ + "gene_synonym", + "ygcJ" + ] + ], + "dna_sequence": "ATGTCTAACTTTATCAATATTCATGTTCTGATCTCTCACAGCCCTTCATGTCTGAACCGCGACGATATGAACATGCAGAAAGACGCTATTTTCGGCGGCAAAAGACGAGTAAGAATTTCAAGTCAAAGCCTTAAACGTGCGATGCGTAAAAGTGGTTATTACGCACAAAATATTGGTGAATCCAGTCTCAGAACCATTCATCTTGCACAATTACGTGATGTTCTTCGGCAAAAACTTGGTGAACGTTTTGACCAAAAAATCATCGATAAGACATTAGCGCTGCTCTCCGGTAAATCAGTTGATGAAGCCGAAAAGATTTCTGCCGATGCGGTTACTCCCTGGGTTGTGGGAGAAATAGCCTGGTTCTGTGAGCAGGTTGCAAAAGCAGAGGCTGATAATCTGGATGATAAAAAGCTGCTCAAAGTTCTTAAGGAAGATATTGCCGCCATACGTGTGAATTTACAGCAGGGTGTTGATATTGCGCTTAGTGGAAGAATGGCAACCAGCGGCATGATGACTGAGTTGGGAAAAGTTGATGGTGCAATGTCCATTGCGCATGCGATCACTACTCATCAGGTTGATTCTGATATTGACTGGTTCACCGCTGTAGATGATTTACAGGAACAAGGTTCTGCACATCTGGGAACTCAGGAATTTTCATCGGGTGTTTTTTATCGTTATGCCAACATTAACCTCGCTCAACTTCAGGAAAATTTAGGTGGTGCCTCCAGGGAGCAGGCTCTGGAAATTGCAACCCATGTTGTTCATATGCTGGCAACAGAGGTCCCTGGAGCAAAACAGCGTACTTATGCCGCTTTTAACCCTGCGGATATGGTAATGGTTAATTTCTCCGATATGCCACTTTCTATGGCAAATGCTTTTGAAAAAGCGGTTAAAGCGAAAGATGGCTTTTTGCAACCGTCTATACAGGCGTTTAATCAATATTGGGATCGCGTTGCCAATGGATATGGTCTGAACGGAGCTGCTGCGCAATTCAGCTTATCTGATGTAGACCCAATTACTGCTCAAGTTAAACAAATGCCTACTTTAGAACAGTTAAAATCCTGGGTTCGTAATAATGGCGAGGCGTGA", + "dna_sequence_length": 1092, + "functions": [ + "CRISP RNA (crRNA) containing Cascade antiviral complex protein" + ], + "id": "CDS_2721", + "location": [ + [ + "NC_000913", + 2882142, + "-", + 1092 + ] + ], + "md5": "76a0e6d9411e39e07b9cb30050b7fe05", + "parent_gene": "", + "protein_md5": "aa02f3e5d9249d9ea5bd86b08d4a7c23", + "protein_translation": "MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA", + "protein_translation_length": 363, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009048" + ], + [ + "gene_synonym", + "ECK2754" + ], + [ + "gene_synonym", + "EcoGene:EG13118" + ], + [ + "gene_synonym", + "GI:16130666" + ], + [ + "gene_synonym", + "GeneID:947223" + ], + [ + "gene_synonym", + "JW2729" + ], + [ + "gene_synonym", + "NP_417239.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76632" + ], + [ + "gene_synonym", + "b2759" + ], + [ + "gene_synonym", + "casB" + ], + [ + "gene_synonym", + "cse2" + ], + [ + "gene_synonym", + "ygcK" + ] + ], + "dna_sequence": "ATGGCTGATGAAATTGATGCAATGGCTTTATATCGAGCCTGGCAACAACTGGATAATGGATCATGTGCGCAAATTAGACGTGTTTCAGAACCTGATGAATTACGCGATATCCCTGCGTTTTATAGGCTGGTGCAACCTTTTGGTTGGGAAAACCCACGTCACCAGCAGGCTCTTTTGCGCATGGTGTTTTGCCTGAGCGCAGGAAAGAATGTCATCCGACATCAGGACAAAAAATCGGAGCAAACAACAGGTATCTCGTTGGGAAGAGCTTTAGCCAATAGTGGAAGAATTAACGAGCGCCGTATCTTTCAATTAATTCGGGCTGACAGAACAGCCGATATGGTCCAGTTACGTCGATTACTTACTCACGCCGAACCCGTACTTGACTGGCCATTAATGGCCAGGATGTTGACCTGGTGGGGAAAGCGCGAACGCCAGCAACTTCTGGAAGATTTTGTATTGACCACAAACAAAAATGCGTAA", + "dna_sequence_length": 483, + "functions": [ + "CRISP RNA (crRNA) containing Cascade antiviral complex protein" + ], + "id": "CDS_2722", + "location": [ + [ + "NC_000913", + 2882637, + "-", + 483 + ] + ], + "md5": "558e2d25a384fadf0bc5f8ad6f78428a", + "parent_gene": "", + "protein_md5": "e3069532a7e1e8ea14bc7bbe805c6db8", + "protein_translation": "MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009050" + ], + [ + "gene_synonym", + "ECK2755" + ], + [ + "gene_synonym", + "EcoGene:EG13119" + ], + [ + "gene_synonym", + "GI:16130667" + ], + [ + "gene_synonym", + "GeneID:947222" + ], + [ + "gene_synonym", + "JW2730" + ], + [ + "gene_synonym", + "NP_417240.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46901" + ], + [ + "gene_synonym", + "b2760" + ], + [ + "gene_synonym", + "casA" + ], + [ + "gene_synonym", + "cse1" + ], + [ + "gene_synonym", + "ygcL" + ] + ], + "dna_sequence": "ATGAATTTGCTTATTGATAACTGGATCCCTGTACGCCCGCGAAACGGGGGGAAAGTCCAAATCATAAATCTGCAATCGCTATACTGCAGTAGAGATCAGTGGCGATTAAGTTTGCCCCGTGACGATATGGAACTGGCCGCTTTAGCACTGCTGGTTTGCATTGGGCAAATTATCGCCCCGGCAAAAGATGACGTTGAATTTCGACATCGCATAATGAATCCGCTCACTGAAGATGAGTTTCAACAACTCATCGCGCCGTGGATAGATATGTTCTACCTTAATCACGCAGAACATCCCTTTATGCAGACCAAAGGTGTCAAAGCAAATGATGTGACTCCAATGGAAAAACTGTTGGCTGGGGTAAGCGGCGCGACGAATTGTGCATTTGTCAATCAACCGGGGCAGGGTGAAGCATTATGTGGTGGATGCACTGCGATTGCGTTATTCAACCAGGCGAATCAGGCACCAGGTTTTGGTGGTGGTTTTAAAAGCGGTTTACGTGGAGGAACACCTGTAACAACGTTCGTACGTGGGATCGATCTTCGTTCAACGGTGTTACTCAATGTCCTCACATTACCTCGTCTTCAAAAACAATTTCCTAATGAATCACATACGGAAAACCAACCTACCTGGATTAAACCTATCAAGTCCAATGAGTCTATACCTGCTTCGTCAATTGGGTTTGTCCGTGGTCTATTCTGGCAACCAGCGCATATTGAATTATGCGATCCCATTGGGATTGGTAAATGTTCTTGCTGTGGACAGGAAAGCAATTTGCGTTATACCGGTTTTCTTAAGGAAAAATTTACCTTTACAGTTAATGGGCTATGGCCCCATCCGCATTCCCCTTGTCTGGTAACAGTCAAGAAAGGGGAGGTTGAGGAAAAATTTCTTGCTTTCACCACCTCCGCACCATCATGGACACAAATCAGCCGAGTTGTGGTAGATAAGATTATTCAAAATGAAAATGGAAATCGCGTGGCGGCGGTTGTGAATCAATTCAGAAATATTGCGCCGCAAAGTCCTCTTGAATTGATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAGGGGTGGCAACAATACGGCAATGTGATAAACGAAATAGTGACTGTTGGTTTGGGATATAAAACAGCCTTACGCAAGGCGTTATATACCTTTGCAGAAGGGTTTAAAAATAAAGACTTCAAAGGGGCCGGAGTCTCTGTTCATGAGACTGCAGAAAGGCATTTCTATCGACAGAGTGAATTATTAATTCCCGATGTACTGGCGAATGTTAATTTTTCCCAGGCTGATGAGGTAATAGCTGATTTACGAGACAAACTTCATCAATTGTGTGAAATGCTATTTAATCAATCTGTAGCTCCCTATGCACATCATCCTAAATTAATAAGCACATTAGCGCTTGCCCGCGCCACGCTATACAAACATTTACGGGAGTTAAAACCGCAAGGAGGGCCATCAAATGGCTGA", + "dna_sequence_length": 1509, + "functions": [ + "CRISP RNA (crRNA) containing Cascade antiviral complex protein" + ], + "id": "CDS_2723", + "location": [ + [ + "NC_000913", + 2884138, + "-", + 1509 + ] + ], + "md5": "8d8ab640081e60da08175b7442511e86", + "parent_gene": "", + "protein_md5": "dbf92f53236c5683550ba739ce081967", + "protein_translation": "MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG", + "protein_translation_length": 502, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009054" + ], + [ + "gene_synonym", + "ECK2756" + ], + [ + "gene_synonym", + "EcoGene:EG12634" + ], + [ + "gene_synonym", + "GI:16130668" + ], + [ + "gene_synonym", + "GeneID:947229" + ], + [ + "gene_synonym", + "JW2731" + ], + [ + "gene_synonym", + "NP_417241.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38036" + ], + [ + "gene_synonym", + "b2761" + ], + [ + "gene_synonym", + "cas3" + ], + [ + "gene_synonym", + "ygcB" + ] + ], + "dna_sequence": "ATGGAACCTTTTAAATATATATGCCATTACTGGGGAAAATCCTCAAAAAGCTTGACGAAAGGAAATGATATTCATCTGTTAATTTATCATTGCCTTGATGTTGCTGCTGTTGCAGATTGCTGGTGGGATCAATCAGTCGTACTGCAAAATACTTTTTGCCGAAATGAAATGCTATCAAAACAGAGGGTGAAGGCCTGGCTGTTATTTTTCATTGCTCTTCATGATATTGGAAAGTTTGATATACGATTCCAATATAAATCAGCAGAAAGTTGGCTGAAATTAAATCCTGCAACGCCATCACTTAATGGTCCATCAACACAAATGTGCCGTAAATTTAATCATGGTGCAGCCGGTCTGTATTGGTTTAACCAGGATTCACTTTCAGAGCAATCTCTCGGGGATTTTTTCAGTTTTTTTGATGCCGCTCCTCATCCTTATGAGTCCTGGTTTCCATGGGTAGAGGCCGTTACAGGACATCATGGTTTTATATTACATTCCCAGGATCAAGATAAGTCGCGTTGGGAAATGCCAGCTTCTCTGGCATCTTATGCTGCGCAAGATAAACAGGCTCGTGAGGAGTGGATATCTGTACTGGAAGCATTATTTTTAACGCCAGCGGGGTTATCTATAAACGATATACCACCTGATTGTTCATCACTGTTAGCAGGTTTTTGCTCGCTTGCTGACTGGTTAGGCTCCTGGACTACAACGAATACCTTTCTGTTTAATGAGGATGCGCCTTCCGACATAAATGCTCTGAGAACGTATTTCCAGGACCGACAGCAGGATGCGAGCCGGGTATTGGAGTTGAGTGGACTTGTATCAAATAAGCGATGTTATGAAGGTGTTCATGCACTACTGGACAATGGCTATCAACCCAGACAATTACAGGTGTTAGTTGATGCTCTTCCAGTAGCTCCCGGGCTGACGGTAATAGAGGCACCTACAGGCTCCGGTAAAACGGAAACAGCGCTGGCCTATGCTTGGAAACTTATTGATCAACAAATTGCGGATAGTGTTATTTTTGCCCTCCCAACACAAGCTACCGCGAATGCTATGCTTACGAGAATGGAAGCGAGCGCGAGCCACTTATTTTCATCCCCAAATCTTATTCTTGCTCATGGCAATTCACGGTTTAACCACCTCTTTCAATCAATAAAATCACGCGCGATTACTGAACAGGGGCAAGAAGAAGCGTGGGTTCAGTGTTGTCAGTGGTTGTCACAAAGCAATAAGAAAGTGTTTCTTGGGCAAATCGGCGTTTGCACGATTGATCAGGTGTTGATATCGGTATTGCCAGTTAAACACCGCTTTATCCGTGGTTTGGGAATTGGTCGAAGTGTTTTAATTGTTGATGAAGTTCATGCTTACGACACCTATATGAACGGCTTGCTGGAGGCAGTGCTCAAGGCTCAGGCTGATGTGGGAGGGAGTGTTATTCTTCTTTCCGCAACCCTACCAATGAAACAAAAACAGAAACTTCTGGATACTTATGGTCTGCATACAGATCCAGTGGAAAATAACTCCGCATATCCACTCATTAACTGGCGAGGTGTGAATGGTGCGCAACGTTTTGATCTGCTAGCTCATCCAGAACAACTCCCGCCCCGCTTTTCGATTCAGCCAGAACCTATTTGTTTAGCTGACATGTTACCTGACCTTACGATGTTAGAGCGAATGATCGCAGCGGCAAACGCGGGTGCACAGGTCTGTCTTATTTGCAATTTGGTTGACGTTGCACAAGTATGCTACCAACGGCTAAAGGAGCTAAATAACACGCAAGTAGATATAGATTTGTTTCATGCGCGCTTTACGCTGAACGATCGTCGTGAAAAAGAGAATCGAGTTATTAGCAATTTCGGCAAAAATGGGAAGCGAAATGTTGGACGGATACTTGTCGCAACCCAGGTCGTGGAACAATCACTCGACGTTGATTTTGATTGGTTAATTACTCAGCATTGTCCTGCAGATTTGCTTTTCCAACGATTGGGCCGTTTACATCGCCATCATCGCAAATATCGTCCCGCTGGTTTTGAGATTCCTGTTGCCACCATTTTGCTGCCTGATGGCGAGGGTTACGGACGACATGAGCATATTTATAGCAACGTTAGAGTCATGTGGCGGACGCAGCAACATATTGAGGAGCTTAATGGAGCATCCTTATTTTTCCCTGATGCTTACCGGCAATGGCTGGATAGCATTTACGATGATGCGGAAATGGATGAGCCAGAATGGGTCGGCAATGGCATGGATAAATTTGAAAGCGCCGAGTGTGAAAAAAGGTTCAAGGCTCGCAAGGTCCTGCAGTGGGCTGAAGAATATAGCTTGCAGGATAACGATGAAACCATTCTTGCGGTAACGAGGGATGGGGAAATGAGCCTGCCATTATTGCCTTATGTACAAACGTCTTCAGGTAAACAACTGCTCGATGGCCAGGTCTACGAGGACCTAAGTCATGAACAGCAGTATGAGGCGCTTGCACTTAATCGCGTCAATGTACCCTTCACCTGGAAACGTAGTTTTTCTGAAGTAGTAGATGAAGATGGGTTACTTTGGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAA", + "dna_sequence_length": 2667, + "functions": [ + "Cascade complex anti-viral R-loop helicase-annealase Cas3" + ], + "id": "CDS_2724", + "location": [ + [ + "NC_000913", + 2887219, + "-", + 2667 + ] + ], + "md5": "fb2d2ae5036e64d9e5192e0ed049dc74", + "parent_gene": "", + "protein_md5": "82fdcef673701e4a19d8eebbf7a5ad8e", + "protein_translation": "MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK", + "protein_translation_length": 888, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009057" + ], + [ + "gene_synonym", + "ECK2757" + ], + [ + "gene_synonym", + "EcoGene:EG10189" + ], + [ + "gene_synonym", + "GI:16130669" + ], + [ + "gene_synonym", + "GeneID:947230" + ], + [ + "gene_synonym", + "JW2732" + ], + [ + "gene_synonym", + "NP_417242.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17854" + ], + [ + "gene_synonym", + "b2762" + ], + [ + "gene_synonym", + "cysH" + ] + ], + "dna_sequence": "ATGTCCAAACTCGATCTAAACGCCCTGAACGAACTGCCGAAGGTAGATCGCATTCTGGCGCTGGCGGAAACTAACGCCGAACTGGAAAAACTGGACGCTGAAGGCCGCGTAGCCTGGGCGCTGGATAATCTGCCCGGTGAATATGTACTTTCTTCCAGCTTTGGCATTCAGGCGGCGGTGAGCCTGCATCTGGTGAATCAAATTCGCCCGGATATTCCGGTGATCCTCACCGATACGGGTTACTTGTTCCCGGAAACCTACCGCTTTATTGACGAGTTAACGGACAAACTCAAGCTCAACCTGAAAGTGTACCGTGCTACCGAAAGCGCAGCCTGGCAGGAAGCACGCTACGGAAAACTGTGGGAGCAGGGCGTTGAAGGCATTGAAAAGTACAATGACATCAACAAAGTCGAACCGATGAACCGGGCTCTGAAAGAACTGAATGCGCAAACCTGGTTTGCTGGCCTGCGCCGTGAACAATCCGGCAGTCGTGCCAATTTACCGGTGCTGGCAATTCAGCGTGGCGTATTTAAAGTGCTGCCGATTATCGACTGGGATAACCGAACTATTTATCAGTACCTGCAAAAACATGGCCTGAAATATCACCCATTATGGGATGAAGGATATTTATCGGTGGGCGATACCCATACAACCCGTAAATGGGAACCCGGCATGGCGGAAGAAGAAACGCGTTTCTTTGGCTTAAAAAGGGAATGTGGGTTACACGAAGGGTAA", + "dna_sequence_length": 735, + "functions": [ + "phosphoadenosine phosphosulfate reductase", + "PAPS reductase, thioredoxin dependent" + ], + "id": "CDS_2725", + "location": [ + [ + "NC_000913", + 2888312, + "-", + 735 + ] + ], + "md5": "9cc9595e0a15607bc6a7f6672862bc4a", + "parent_gene": "", + "protein_md5": "3133b183438b1574006ba1d1d4458b3e", + "protein_translation": "MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009061" + ], + [ + "gene_synonym", + "ECK2758" + ], + [ + "gene_synonym", + "EcoGene:EG10190" + ], + [ + "gene_synonym", + "GI:16130670" + ], + [ + "gene_synonym", + "GeneID:947231" + ], + [ + "gene_synonym", + "JW2733" + ], + [ + "gene_synonym", + "NP_417243.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17846" + ], + [ + "gene_synonym", + "b2763" + ], + [ + "gene_synonym", + "cysI" + ] + ], + "dna_sequence": "ATGAGCGAAAAACATCCAGGGCCTTTAGTGGTCGAAGGAAAACTGACAGACGCCGAGCGCATGAAGCATGAAAGCAACTACCTGCGCGGCACCATTGCGGAAGATTTAAACGACGGTCTGACCGGCGGCTTTAAGGGCGACAACTTCCTGCTGATTCGCTTCCACGGCATGTATCAGCAGGATGACCGCGACATCCGCGCCGAACGTGCTGAACAGAAGCTGGAGCCGCGCCACGCGATGCTGCTTCGCTGTCGTCTGCCGGGTGGGGTGATTACCACTAAACAGTGGCAGGCGATCGACAAATTTGCCGGTGAAAACACCATCTATGGCAGCATTCGCCTGACCAACCGCCAGACGTTTCAGTTCCACGGCATTCTGAAAAAGAACGTCAAACCGGTGCACCAGATGCTGCACTCGGTCGGTCTTGATGCGCTGGCGACAGCTAACGACATGAACCGTAACGTACTCTGCACCTCGAACCCTTACGAGTCGCAGCTGCACGCGGAAGCGTACGAGTGGGCGAAGAAGATTTCTGAGCATCTGTTGCCTCGTACCCGCGCGTATGCGGAGATCTGGCTCGACCAGGAAAAAGTCGCCACTACTGATGAAGAACCGATCCTCGGCCAGACCTACCTGCCGCGTAAATTCAAAACCACGGTAGTGATCCCGCCACAGAACGATATCGATCTGCACGCCAACGACATGAACTTCGTGGCGATCGCCGAAAACGGCAAGCTGGTGGGCTTTAACCTGTTGGTGGGCGGTGGGCTTTCCATCGAACACGGCAACAAGAAAACCTACGCCCGCACCGCGAGTGAGTTTGGCTATCTGCCGCTGGAGCATACGCTGGCGGTGGCCGAAGCCGTCGTGACAACTCAGCGTGACTGGGGTAACCGAACCGATCGTAAAAATGCCAAAACCAAATACACGCTGGAGCGCGTGGGGGTTGAGACGTTTAAAGCGGAAGTGGAGCGTCGCGCGGGGATCAAATTTGAACCGATCCGTCCATATGAGTTCACCGGACGAGGCGATCGTATTGGCTGGGTTAAGGGCATTGATGATAACTGGCACCTGACGCTGTTTATCGAAAATGGTCGCATCCTTGATTATCCGGCGCGTCCGCTGAAAACCGGCCTGCTGGAGATCGCGAAGATCCACAAAGGCGATTTCCGCATTACGGCGAACCAGAATCTGATCATCGCCGGTGTACCGGAAAGCGAGAAAGCGAAGATCGAGAAGATCGCCAAAGAGAGCGGGTTAATGAATGCCGTCACGCCGCAGCGTGAAAACTCGATGGCTTGCGTGTCATTCCCGACTTGCCCGCTGGCGATGGCGGAAGCAGAGCGTTTCCTGCCGTCTTTTATCGACAACATCGATAATTTAATGGCGAAACATGGTGTCAGCGATGAGCATATCGTGATGCGTGTAACAGGCTGCCCGAACGGTTGTGGTCGCGCGATGCTGGCGGAAGTGGGCCTGGTGGGTAAAGCGCCGGGTCGCTACAACCTGCATCTTGGCGGCAACCGCATTGGGACACGTATCCCACGGATGTATAAAGAAAACATCACCGAGCCGGAAATCCTGGCGTCGCTTGATGAACTGATAGGGCGCTGGGCGAAAGAGCGCGAAGCGGGTGAAGGCTTCGGCGACTTTACGGTGCGTGCGGGCATCATTCGCCCGGTGCTCGATCCGGCGCGTGATTTGTGGGATTAA", + "dna_sequence_length": 1713, + "functions": [ + "sulfite reductase, beta subunit, NAD(P)-binding, heme-binding" + ], + "id": "CDS_2726", + "location": [ + [ + "NC_000913", + 2890099, + "-", + 1713 + ] + ], + "md5": "16e61d5fe1b3e758986ba26ae8c5b54a", + "parent_gene": "", + "protein_md5": "99d2bbaab9d488b2cec6d118f4f8da54", + "protein_translation": "MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD", + "protein_translation_length": 570, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009063" + ], + [ + "gene_synonym", + "ECK2759" + ], + [ + "gene_synonym", + "EcoGene:EG10191" + ], + [ + "gene_synonym", + "GI:16130671" + ], + [ + "gene_synonym", + "GeneID:947239" + ], + [ + "gene_synonym", + "JW2734" + ], + [ + "gene_synonym", + "NP_417244.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38038" + ], + [ + "gene_synonym", + "b2764" + ], + [ + "gene_synonym", + "cysJ" + ] + ], + "dna_sequence": "ATGACGACACAGGTCCCACCTTCCGCGTTGCTTCCGTTGAACCCGGAGCAACTGGCACGCCTTCAGGCGGCCACGACCGATTTAACTCCCACCCAGCTTGCCTGGGTTTCTGGCTATTTCTGGGGCGTACTCAATCAGCAGCCTGCTGCGCTTGCAGCGACGCCAGCGCCAGCCGCAGAAATGCCGGGTATAACTATTATCTCCGCCTCGCAAACCGGCAATGCGCGCCGGGTTGCTGAAGCATTACGTGATGATTTATTAGCAGCAAAACTGAACGTTAAGCTGGTGAACGCGGGCGACTATAAATTCAAACAAATCGCCAGCGAAAAACTGCTCATCGTAGTGACGTCAACGCAAGGGGAAGGGGAACCGCCGGAAGAAGCCGTCGCGCTGCATAAGTTCCTGTTCTCCAAAAAAGCGCCAAAGCTGGAAAACACCGCGTTTGCCGTGTTTAGCCTCGGCGATAGCTCTTATGAATTTTTCTGCCAGTCCGGGAAAGATTTCGACAGCAAGCTGGCGGAACTGGGTGGTGAACGCCTGCTCGACCGTGTCGATGCCGATGTTGAATACCAGGCTGCTGCCAGCGAGTGGCGCGCCCGCGTGGTTGATGCGCTTAAATCGCGTGCGCCTGTCGCGGCACCTTCGCAATCCGTCGCTACTGGCGCGGTAAATGAAATCCACACCAGCCCGTACAGCAAAGACGCGCCGCTGGTGGCTAGCCTCTCTGTTAACCAGAAAATTACCGGGCGTAACTCTGAAAAAGACGTTCGCCATATCGAAATTGACTTAGGTGACTCGGGCATGCGTTACCAGCCGGGTGACGCGCTGGGCGTCTGGTATCAGAACGATCCGGCACTGGTGAAAGAACTTGTCGAACTGCTGTGGCTGAAAGGCGATGAACCTGTCACCGTCGAGGGCAAAACGTTGCCTCTGAACGAAGCGCTACAGTGGCACTTCGAACTGACCGTCAACACCGCCAACATTGTTGAGAATTACGCCACGCTTACCCGCAGTGAAACACTGCTGCCGCTGGTGGGCGATAAAGCGAAGTTACAGCATTACGCCGCGACGACGCCGATTGTTGACATGGTGCGTTTCTCCCCGGCACAGCTTGATGCCGAAGCGCTAATTAATCTGCTGCGCCCGCTGACGCCGCGTCTGTATTCCATCGCCTCCTCGCAGGCGGAAGTCGAGAACGAAGTACACGTCACCGTTGGTGTGGTGCGTTACGACGTGGAAGGCCGCGCCCGTGCCGGTGGTGCCTCCAGCTTCCTCGCTGACCGCGTGGAAGAAGAGGGCGAAGTCCGCGTATTTATCGAACATAACGATAACTTCCGCCTGCCAGCCAATCCAGAAACCCCGGTGATTATGATTGGCCCAGGCACCGGTATTGCGCCGTTCCGCGCCTTTATGCAGCAACGCGCCGCCGACGAAGCGCCAGGTAAAAACTGGCTGTTCTTTGGTAATCCGCACTTTACGGAAGACTTCCTGTACCAGGTGGAGTGGCAGCGCTACGTCAAAGATGGCGTGCTGACACGTATCGATCTTGCCTGGTCGCGCGATCAAAAAGAAAAAGTTTACGTACAAGACAAACTGCGCGAACAGGGCGCGGAGCTGTGGCGCTGGATCAATGATGGTGCCCACATTTATGTCTGCGGCGACGCTAATCGCATGGCGAAAGACGTTGAGCAGGCACTTCTGGAAGTGATTGCCGAATTTGGTGGCATGGACACCGAAGCGGCGGATGAATTTTTAAGTGAGCTGCGCGTAGAGCGCCGTTATCAGCGAGATGTCTACTAA", + "dna_sequence_length": 1800, + "functions": [ + "sulfite reductase, alpha subunit, flavoprotein" + ], + "id": "CDS_2727", + "location": [ + [ + "NC_000913", + 2891898, + "-", + 1800 + ] + ], + "md5": "8cd7f615f91765b71f4992093ff0a5f0", + "parent_gene": "", + "protein_md5": "fb5aec671520cf6aab02a5a3862c2aeb", + "protein_translation": "MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGMRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY", + "protein_translation_length": 599, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009068" + ], + [ + "gene_synonym", + "ECK2760" + ], + [ + "gene_synonym", + "EcoGene:EG13120" + ], + [ + "gene_synonym", + "GI:16130672" + ], + [ + "gene_synonym", + "GeneID:945123" + ], + [ + "gene_synonym", + "JW2735" + ], + [ + "gene_synonym", + "NP_417245.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65870" + ], + [ + "gene_synonym", + "b2765" + ], + [ + "gene_synonym", + "queD" + ], + [ + "gene_synonym", + "sscR" + ], + [ + "gene_synonym", + "ygcM" + ] + ], + "dna_sequence": "ATGATGTCCACCACGTTATTTAAAGATTTCACCTTCGAAGCCGCTCACCGCTTACCACACGTCCCGGAAGGGCATAAATGTGGTCGCCTGCACGGGCATTCCTTTATGGTGCGACTGGAAATTACCGGGGAAGTCGATCCGCATACGGGCTGGATTATCGATTTCGCTGAACTAAAAGCGGCGTTTAAACCAACCTACGAGCGCCTCGATCACCATTATCTCAATGATATTCCAGGTCTGGAAAACCCAACCAGCGAGGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAAACCTGCACCGCAGGTTGTATCTATCGCGGCGAATGA", + "dna_sequence_length": 366, + "functions": [ + "6-pyruvoyl tetrahydrobiopterin synthase (PTPS)" + ], + "id": "CDS_2728", + "location": [ + [ + "NC_000913", + 2892214, + "+", + 366 + ] + ], + "md5": "4b9c790c6984d2db51c59c32ff9a46d9", + "parent_gene": "", + "protein_md5": "d07a0f3b6ef069a63976276551ee69c0", + "protein_translation": "MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009070" + ], + [ + "gene_synonym", + "ECK2761" + ], + [ + "gene_synonym", + "EcoGene:EG13121" + ], + [ + "gene_synonym", + "GI:90111484" + ], + [ + "gene_synonym", + "GeneID:946114" + ], + [ + "gene_synonym", + "JW2736" + ], + [ + "gene_synonym", + "NP_417246.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46904" + ], + [ + "gene_synonym", + "b2766" + ], + [ + "gene_synonym", + "ygcN" + ] + ], + "dna_sequence": "ATGGAAGACGACTGCGACATTATTATTATTGGTGCCGGTATTGCAGGCACCGCTTGCGCGTTACGCTGCGCGCGAGCGGGTTTATCCGTTTTGTTACTGGAACGCGCTGAAATCCCCGGCAGCAAAAATCTTTCCGGCGGGCGGTTATATACCCATGCACTCGCGGAACTCCTCCCGCAATTTCATCTGACCGCGCCTCTTGAACGACGCATCACTCACGAAAGCCTTTCCCTGTTAACGCCCGATGGCGTAACGACGTTTTCCAGCTTACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAATGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCGCGCCCGTTATGTGGTGCTGGCAGAAGGTGCCAACAGCGTCCTGGCTGAACGTCACGGGTTAGTGACTCGTCCTGCTGGCGAAGCGATGGCGTTGGGGATCAAAGAAGTGCTGTCGCTGGAAACATCCGCTATTGAAGAACGTTTTCATCTGGAGAATAACGAAGGCGCAGCGTTGCTGTTCAGCGGCAGGATCTGTGATGACTTACCCGGCGGCGCATTTCTTTATACTAATCAACAAACGCTCTCGTTAGGGATTGTTTGCCCGCTCTCTTCCCTTACGCAAAGTCGTGTTCCGGCAAGCGAGCTGCTGACTCGCTTTAAAGCGCATCCGGCAGTGCGCCCGCTTATCAAAAACACGGAATCACTGGAGTATGGTGCGCATCTGGTGCCAGAAGGTGGCTTGCACAGTATGCCGGTGCAATACGCCGGTAACGGCTGGCTGCTGGTGGGCGATGCGTTGCGCAGTTGCGTCAATACCGGAATTTCCGTGCGCGGCATGGATATGGCGCTGACTGGCGCGCAGGCGGCGGCACAAACGCTGATAAGCGCCTGCCAGCACCGCGAGCCGCAAAATCTGTTTCCGCTTTATCATCACAACGTAGAGCGCAGCCTGCTGTGGGATGTTCTACAGCGTTATCAGCATGTTCCGGCGCTTTTGCAACGCCCGGGATGGTACCGTACGTGGCCTGCGTTAATGCAGGATATTTCCCGCGATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAG", + "dna_sequence_length": 1272, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2729", + "location": [ + [ + "NC_000913", + 2892657, + "+", + 1272 + ] + ], + "md5": "7d80473c9e461381e8a4a7d0b6ea99a5", + "parent_gene": "", + "protein_md5": "30ce9333a91d8fa65e4c3cc3e0484661", + "protein_translation": "MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL", + "protein_translation_length": 423, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009072" + ], + [ + "gene_synonym", + "ECK2762" + ], + [ + "gene_synonym", + "EcoGene:EG13122" + ], + [ + "gene_synonym", + "GI:90111485" + ], + [ + "gene_synonym", + "GeneID:945120" + ], + [ + "gene_synonym", + "JW2737" + ], + [ + "gene_synonym", + "NP_417247.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46905" + ], + [ + "gene_synonym", + "b2767" + ], + [ + "gene_synonym", + "ygcO" + ] + ], + "dna_sequence": "ATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGGATAA", + "dna_sequence_length": 261, + "functions": [ + "putative 4Fe-4S cluster-containing protein" + ], + "id": "CDS_2730", + "location": [ + [ + "NC_000913", + 2893919, + "+", + 261 + ] + ], + "md5": "e57229b911b769dda7874c0cef3c4197", + "parent_gene": "", + "protein_md5": "6ea51bd3c5795f4ea493049cd343d6c3", + "protein_translation": "MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG", + "protein_translation_length": 86, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009074" + ], + [ + "gene_synonym", + "ECK2763" + ], + [ + "gene_synonym", + "EcoGene:EG13123" + ], + [ + "gene_synonym", + "GI:16130675" + ], + [ + "gene_synonym", + "GeneID:947536" + ], + [ + "gene_synonym", + "JW2738" + ], + [ + "gene_synonym", + "NP_417248.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46906" + ], + [ + "gene_synonym", + "b2768" + ], + [ + "gene_synonym", + "ygcP" + ] + ], + "dna_sequence": "ATGCCCCTCTTACACCTGCTCCGCCAGAATCCGGTGATTGCTGCCGTTAAAGATAATGCCAGCCTGCAACTGGCAATCGATTCTGAATGCCAATTTATTTCCGTGTTGTACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGACCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAATCGAATCCGGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGA", + "dna_sequence_length": 576, + "functions": [ + "putative antiterminator regulatory protein" + ], + "id": "CDS_2731", + "location": [ + [ + "NC_000913", + 2894196, + "+", + 576 + ] + ], + "md5": "5cb9b017caf4e82527af3c695b9d1513", + "parent_gene": "", + "protein_md5": "c317c829e12f496268bed2f3f3bfd3db", + "protein_translation": "MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009077" + ], + [ + "gene_synonym", + "ECK2764" + ], + [ + "gene_synonym", + "EcoGene:EG13124" + ], + [ + "gene_synonym", + "GI:90111486" + ], + [ + "gene_synonym", + "GeneID:946413" + ], + [ + "gene_synonym", + "JW5440" + ], + [ + "gene_synonym", + "NP_417249.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46907" + ], + [ + "gene_synonym", + "b2769" + ], + [ + "gene_synonym", + "ygcQ" + ] + ], + "dna_sequence": "ATGAATATCGCAATTGTGACAATAAATCAGGAGAATGCCGCAATAGCAAGCTGGCTGGCGGCGCAGGATTTCAGCGGTTGTACCCTGGCGCACTGGCAGATTGAACCTCAGCCTGTAGTGGCGGAACAGGTGCTGGATGCGTTGGTGGAACAGTGGCAGCGAACGCCTGCGGACGTTGTTCTCTTTCCGCCGGGAACGTTTGGCGATGAACTGTCGACCCGGCTGGCCTGGCGTTTACATGGTGCAAGCATCTGCCAGGTGACTTCGTTAGATATTCCAACCGTAAGCGTGCGCAAATCCCACTGGGGAAATGCGCTAACGGCGACGCTGCAAACAGAAAAACGCCCGCTATGCCTTTCCCTGGCGCGTCAGGCGGGAGCAGCGAAAAACGCCACGTTGCCCTCTGGAATGCAACAACTGAACATTGTCCCGGGTGCGCTTCCGGACTGGCTGGTTAGCACAGAGGATCTGAAAAATGTTACCCGCGACCCATTAGCTGAGGCCAGACGGGTGCTGGTGGTGGGGCAGGGCGGAGAGGCAGATAACCAGGAAATCGCTATGCTGGCAGAAAAGCTGGGAGCCGAAGTGGGCTACAGTCGGGCGCGAGTGATGAACGGTGGCGTTGATGCTGAAAAAGTGATTGGTATTTCCGGACATCTGCTGGCACCTGAGGTGTGTATTGTTGTTGGCGCTTCTGGCGCAGCAGCGTTAATGGCGGGCGTACGCAATAGCAAGTTTGTGGTGGCGATTAATCATGACGCCAGCGCTGCGGTATTTTCACAGGCAGATGTTGGCGTGGTTGATGACTGGAAAGTGGTGCTGGAGGCACTGGTGACAAACATTCACGCAGATTGCCAATAA", + "dna_sequence_length": 861, + "functions": [ + "putative flavoprotein" + ], + "id": "CDS_2732", + "location": [ + [ + "NC_000913", + 2895779, + "-", + 861 + ] + ], + "md5": "44efc5d4c38fd2879f3982d097811153", + "parent_gene": "", + "protein_md5": "48a7b796df483692aa64358ff0b142bf", + "protein_translation": "MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009079" + ], + [ + "gene_synonym", + "ECK2765" + ], + [ + "gene_synonym", + "EcoGene:EG13125" + ], + [ + "gene_synonym", + "GI:90111487" + ], + [ + "gene_synonym", + "GeneID:947240" + ], + [ + "gene_synonym", + "JW5441" + ], + [ + "gene_synonym", + "NP_417250.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46908" + ], + [ + "gene_synonym", + "b2770" + ], + [ + "gene_synonym", + "ygcR" + ] + ], + "dna_sequence": "ATGAACATTCTGTTAGCGTTTAAAGCCGAACCGGATGCCGGAATGCTGGCGGAAAAAGAGTGGCAGGCGGCGGCTCAGGGTAAAAGCGGACCGGATATTTCGCTACTGCGAAGTTTACTCGGTGCTGATGAACAGGCCGCTGCCGCGCTGCTGTTGGCGCAGAGAAAAAACGGTACGCCGATGTCTTTAACCGCGTTGAGCATGGGGGATGAACGGGCATTGCACTGGCTGCGCTATCTCATGGCTCTTGGGTTTGAGGAAGCTGTATTGCTGGAGACGGCGGCAGATCTGCGCTTTGCGCCGGAATTTGTCGCTCGCCATATTGCCGAATGGCAGCATCAGAATCCGCTGGATCTGATAATTACCGGCTGCCAAAGCAGCGAAGGGCAGAATGGGCAAACGCCATTTTTGCTGGCGGAAATGCTGGGCTGGCCCTGCTTCACCCAGGTGGAGCGTTTCACTCTCGACGCGCTGTTTATCACCCTCGAACAGCGTACTGAACATGGGTTGCGTTGTTGCCGGGTTCGCTTGCCTGCGGTGATTGCCGTGCGTCAGTGCGGTGAAGTGGCCTTGCCAGTACCGGGAATGCGCCAGCGAATGGCTGCGGGGAAAGCAGAAATTATCCGTAAAACTGTTGCTGCCGAAATGCCAGCGATGCAGTGTCTGCAACTGGCAAGAGCAGAGCAACGACGCGGAGCGACGCTGATTGATGGGCAAACGGTAGCAGAAAAAGCTCAAAAGCTATGGCAGGACTATTTACGCCAAAGGATGCAGCCATGA", + "dna_sequence_length": 780, + "functions": [ + "putative flavoprotein" + ], + "id": "CDS_2733", + "location": [ + [ + "NC_000913", + 2896555, + "-", + 780 + ] + ], + "md5": "11b83a4b47a0e1cb4c744f130de9ac38", + "parent_gene": "", + "protein_md5": "db6f51994b96e7d3bc259c8bbb8e6364", + "protein_translation": "MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009082" + ], + [ + "gene_synonym", + "ECK2766" + ], + [ + "gene_synonym", + "EcoGene:EG13126" + ], + [ + "gene_synonym", + "GI:90111488" + ], + [ + "gene_synonym", + "GeneID:947238" + ], + [ + "gene_synonym", + "JW5845" + ], + [ + "gene_synonym", + "NP_417251.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46909" + ], + [ + "gene_synonym", + "b2771" + ], + [ + "gene_synonym", + "ygcS" + ] + ], + "dna_sequence": "ATGAACACTTCACCGGTGCGAATGGATGATTTACCGCTTAACCGTTTTCACTGCCGCATTGCTGCGCTCACTTTCGGCGCACACCTGACCGACGGTTATGTTCTCGGCGTCATTGGTTACGCCATTATTCAGCTTACGCCCGCCATGCAACTGACGCCGTTTATGGCGGGAATGATCGGCGGCTCGGCGCTCCTTGGTTTGTTCCTTGGCAGCCTGGTTCTTGGGTGGATCTCCGACCATATTGGTCGGCAAAAAATCTTCACCTTCAGCTTTTTGCTGATTACGCTTGCTTCGTTTTTACAATTTTTTGCCACCACGCCAGAGCATCTTATTGGACTGCGCATTTTGATTGGCATTGGTCTGGGAGGCGATTATTCAGTAGGTCACACCTTGCTGGCTGAATTTTCCCCGCGCCGCCATCGCGGTATTTTGCTGGGCGCATTCAGCGTGGTGTGGACCGTAGGCTATGTGCTGGCAAGTATTGCCGGACATCACTTTATTTCCGAAAACCCGGAGGCCTGGCGCTGGCTACTGGCATCGGCAGCTCTGCCCGCGTTGTTGATTACGTTATTACGCTGGGGAACGCCAGAATCACCACGCTGGCTACTGCGCCAGGGGCGTTTTGCAGAAGCTCACGCTATCGTGCATCGCTATTTTGGTCCCCATGTTTTACTGGGCGATGAAGTGGTAACGGCGACCCATAAACACATCAAAACCTTGTTCTCTTCGCGTTACTGGCGGCGCACGGCGTTTAACAGCGTCTTCTTTGTCTGCCTCGTAATCCCATGGTTTGTGATTTATACCTGGCTGCCAACTATCGCCCAGACTATTGGTCTGGAAGATGCGCTGACTGCCAGCCTGATGCTTAATGCGTTGTTAATTGTGGGCGCGCTGCTGGGATTAGTTCTGACGCACCTGCTGGCACATCGCAAATTTTTGCTGGGAAGTTTTTTGCTGCTGGCGGCAACGCTGGTAGTCATGGCCTGTTTGCCTTCCGGCAGTTCATTAACGCTGCTGCTTTTTGTTCTCTTCAGCACCACCATTTCGGCAGTCAGTAATCTGGTGGGCATTTTGCCTGCGGAAAGTTTTCCTACTGACATTCGCTCGCTGGGCGTCGGTTTTGCCACTGCCATGAGTCGACTTGGCGCGGCGGTAAGTACTGGCCTGCTGCCGTGGGTGCTGGCGCAGTGGGGAATGCAAGTCACCTTATTGCTCCTGGCGACAGTGTTGTTGGTTGGTTTTGTTGTGACCTGGCTATGGGCACCAGAAACTAAAGCCCTCCCGCTGGTGGCGGCGGGAAATGTAGGAGGTGCGAATGAACATTCTGTTAGCGTTTAA", + "dna_sequence_length": 1338, + "functions": [ + "putative MFS sugar transporter", + "membrane protein" + ], + "id": "CDS_2734", + "location": [ + [ + "NC_000913", + 2897870, + "-", + 1338 + ] + ], + "md5": "b1eadfbea28aaed5b67cb378fe40cc54", + "parent_gene": "", + "protein_md5": "2a896b6c7409fdd3b557392e8e0350b0", + "protein_translation": "MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174094" + ], + [ + "gene_synonym", + "ECK2767" + ], + [ + "gene_synonym", + "EcoGene:EG13128" + ], + [ + "gene_synonym", + "GI:49176267" + ], + [ + "gene_synonym", + "GeneID:2847709" + ], + [ + "gene_synonym", + "JW5442" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46911" + ], + [ + "gene_synonym", + "YP_026183.1" + ], + [ + "gene_synonym", + "b4463" + ], + [ + "gene_synonym", + "ygcT" + ], + [ + "gene_synonym", + "ygcU" + ], + [ + "gene_synonym", + "ygcV" + ] + ], + "dna_sequence": "ATGTCTTTATCTCGCGCAGCGATTGTCGACCAGCTAAAGGAAATTGTTGGTGCAGATCGCGTAATTACCGATGAAACAGTATTAAAGAAAAACAGTATTGACCGTTTTCGTAAATTTCCGGATATTCATGGCATTTATACTTTGCCGATTCCGGCAGCGGTCGTAAAACTCGGTTCCACAGAGCAAGTATCCCGTGTGCTGAATTTTATGAATGCGCACAAAATTAACGGTGTGCCGCGTACCGGTGCTTCCGCCACCGAAGGTGGGCTGGAAACTGTTGTAGAAAACTCGGTGGTGCTCGACGGCTCCGCCATGAATCAAATCATTAATATTGATATTGAGAATATGCAGGCGACGGCGCAATGTGGTGTTCCGCTGGAAGTGCTGGAAAACGCGTTGCGTGAAAAAGGTTACACCACGGGGCATTCTCCGCAGTCAAAGCCGCTGGCGCAGATGGGCGGCCTGGTAGCAACCCGAAGTATCGGGCAGTTCTCCACACTCTACGGCGCAATCGAAGATATGGTCGTTGGTCTGGAAGCAGTATTGGCTGATGGCACCGTCACACGCATTAAAAACGTGCCACGCCGCGCGGCTGGCCCGGACATTCGTCACATCATCATCGGCAACGAAGGTGCATTGTGCTATATCACTGAAGTAACAGTGAAAATCTTTAAATTCACCCCGGAAAACAACCTCTTCTACGGCTATATCCTGGAAGACATGAAAACCGGCTTCAACATCCTGCGTGAAATCATGGTGGAAGGGTATCGTCCGTCAATCGCTCGTTTGTATGACGCTGAAGATGGCACCCAACACTTCACCCATTTTGCCGACGGAAAATGCGTGCTGATCTTTATGGCTGAAGGTAACCCTCGCATTGCGAAGGTGACGGGCGAAGGGATTGCGGAAATCGTTGCCCGCTACCCGCAATGCCAGCGCGTGGACAGCAAGCTGATCGAAACCTGGTTTAACAACCTGAACTGGGGACCGGATAAAGTGGCTGCCGAACGTGTGCAGATCCTCAAAACCGGCAACATGGGCTTTACCACCGAAGTATCCGGCTGCTGGAGCTGCATCCACGAAATCTACGAAAGCGTTATTAACCGTATTCGTACTGAGTTCCCGCACGCCGACGACATCACCATGCTGGGCGGTCATTCCTCTCATAGCTATCAGAACGGCACCAACATGTACTTCGTCTACGATTACAACGTCGTTGACTGTAAGCCGGAAGAGGAAATCGACAAGTACCACAATCCGCTCAACAAGATCATCTGTGAAGAAACCATTCGCCTCGGCGGTTCGATGGTGCACCACCACGGTATCGGTAAACATCGCGTTCACTGGAGCAAACTGGAACACGGCAGCGCGTGGGCGTTGCTGGAAGGGCTGAAAAAGCAGTTCGATCCTAATGGCATTATGAATACGGGTACTATCTATCCGATTGAAAAATAA", + "dna_sequence_length": 1455, + "functions": [ + "putative FAD-linked oxidoreductase" + ], + "id": "CDS_2735", + "location": [ + [ + "NC_000913", + 2899418, + "-", + 1455 + ] + ], + "md5": "6f72021ad6c6615e7c5b08c175dc620a", + "parent_gene": "", + "protein_md5": "c29a6232dffab8a19396606b55d2b641", + "protein_translation": "MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK", + "protein_translation_length": 484, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009088" + ], + [ + "gene_synonym", + "ECK2768" + ], + [ + "gene_synonym", + "EcoGene:EG13130" + ], + [ + "gene_synonym", + "GI:90111489" + ], + [ + "gene_synonym", + "GeneID:947232" + ], + [ + "gene_synonym", + "JW5443" + ], + [ + "gene_synonym", + "NP_417254.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76633" + ], + [ + "gene_synonym", + "b2774" + ], + [ + "gene_synonym", + "ygcW" + ] + ], + "dna_sequence": "ATGTCAATCGAATCTCTCAATGCGTTCTCAATGGATTTTTTCTCCCTGAAAGGTAAAACCGCAATTGTTACCGGTGGGAATAGCGGTTTAGGCCAGGCATTTGCCATGGCGTTGGCCAAAGCTGGCGCAAATATCTTTATTCCTAGTTTCGTCAAAGATAACGGCGAAACAAAGGAAATGATTGAAAAACAGGGTGTTGAGGTGGACTTCATGCAGGTGGGTATCACCGCAGAAGGCGCGCCGCAGAAGATTATCGCTGCTTGCTGTGAGCGTTTCGGTACAGTTGATATTCTGGTTAACAATGCCGGTATTTGTAAGCTGAATAAGGTGCTGGACTTCGGTCGTGCCGACTGGGATCCGATGATTGATGTGAACCTGACCGCCGCATTCGAGTTAAGCTATGAAGCTGCAAAAATTATGATCCCGCAGAAAAGCGGCAAAATTATTAATATCTGTTCATTGTTCTCTTACTTAGGTGGACAATGGTCACCTGCATATTCTGCCACTAAACATGCTCTTGCCGGGTTCACCAAAGCTTATTGTGATGAACTAGGTCAATATAATATTCAGGTAAATGGTATCGCCCCTGGCTATTATGCAACAGATATTACGCTGGCGACACGCAGTAATCCAGAAACCAATCAGCGCGTTCTTGATCATATTCCGGCAAACCGTTGGGGCGATACTCAGGATTTAATGGGCGCAGCCGTATTCCTCGCAAGTCCGGCATCGAATTATGTCAACGGGCATTTATTAGTGGTTGATGGCGGTTATTTAGTGCGCTAA", + "dna_sequence_length": 786, + "functions": [ + "putative SDR family oxidoreductase" + ], + "id": "CDS_2736", + "location": [ + [ + "NC_000913", + 2900273, + "-", + 786 + ] + ], + "md5": "428b902cefd193fea4b9b5592e029f3f", + "parent_gene": "", + "protein_md5": "00639736ca98e19bc6299dd565c2ae37", + "protein_translation": "MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009095" + ], + [ + "gene_synonym", + "ECK2769" + ], + [ + "gene_synonym", + "EcoGene:EG13174" + ], + [ + "gene_synonym", + "GI:16130682" + ], + [ + "gene_synonym", + "GeneID:947248" + ], + [ + "gene_synonym", + "JW2746" + ], + [ + "gene_synonym", + "NP_417255.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77031" + ], + [ + "gene_synonym", + "b2775" + ], + [ + "gene_synonym", + "yqcE" + ], + [ + "gene_synonym", + "yqcF" + ] + ], + "dna_sequence": "ATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAATTTATGGGATTCAGCAATACCGAGATAGGTTTAATAATGAGTACCTTTGGTATTGCGGCCATTATTCTTTATGCCCCCAGCGGCGTTATTGCCGATAAATTTTCACACCGCAAAATGATTACTTCCGCGATGATCATTACCGGATTACTGGGTCTGTTAATGGCAACGTATCCACCGCTGTGGGTAATGCTCTGTATTCAGATCGCCTTTGCGATAACGACGATTTTAATGCTGTGGTCGGTGTCGATTAAAGCTGCATCGTTGCTTGGCGATCATAGCGAGCAAGGGAAAATTATGGGCTGGATGGAAGGGCTGCGCGGCGTCGGTGTAATGTCGCTGGCGGTGTTTACCATGTGGGTCTTTTCTCGCTTTGCACCGGATGACAGCACCAGCCTGAAAACGGTCATTATCATCTATAGTGTGGTTTACATCTTGTTGGGGATTCTGTGCTGGTTTTTTGTTAGCGATAACAACAACCTGCGCAGTGCCAATAACGAAGAAAAACAGTCATTCCAGCTTAGCGACATCCTGGCCGTTTTGCGTATCAGCACCACCTGGTATTGCAGCATGGTGATTTTTGGCGTCTTCACCATCTACGCCATTCTGAGTTACTCCACCAACTATCTGACCGAAATGTATGGCATGTCGCTGGTGGCGGCGAGCTACATGGGGATTGTGATCAACAAAATATTCCGCGCGCTGTGCGGCCCACTTGGCGGCATAATCACCACCTACAGCAAAGTGAAATCCCCTACCCGCGTGATCCAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTACTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGCCCGCTGCAGAAGCCTACCGCAATATGTGGCTGATGGGCATGGCGGCGCTTGGCATGGTGATTGTCTTTACCTTTTTGCTGTTCCAAAAAATTCGTACTGCTGATAGCGCCCCCGCAATGGCTAGCAGCAAGTAA", + "dna_sequence_length": 1278, + "functions": [ + "putative MFS transporter, inner membrane protein" + ], + "id": "CDS_2737", + "location": [ + [ + "NC_000913", + 2900592, + "+", + 1278 + ] + ], + "md5": "a52c8b4c5ded8fb3c84cfa821742ca2c", + "parent_gene": "", + "protein_md5": "45502fef77fbb855912650593344658a", + "protein_translation": "MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009097" + ], + [ + "gene_synonym", + "ECK2770" + ], + [ + "gene_synonym", + "EcoGene:EG13033" + ], + [ + "gene_synonym", + "GI:16130683" + ], + [ + "gene_synonym", + "GeneID:946193" + ], + [ + "gene_synonym", + "JW5444" + ], + [ + "gene_synonym", + "NP_417256.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55138" + ], + [ + "gene_synonym", + "b2776" + ], + [ + "gene_synonym", + "ygcE" + ] + ], + "dna_sequence": "ATGTCGAAAAAATACATCATAGGGATTGATGGCGGAAGTCAGAGCACAAAAGTGGTGATGTACGATCTGGAAGGTAACGTGGTTTGCGAAGGCAAAGGCTTATTACAGCCGATGCACACGCCAGATGCCGATACTGCAGAACATCCTGACGACGATTTATGGGCATCATTATGTTTTGCCGGTCACGATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGCTAGGCGAGTCGTTAATTCAGGATGCCAGGGCGCAGGATCTTTCACCGGAAGATTTACTCAACAAAAAAGCTTCTTGTGTGCCGCCAGGCTGTAATGGTCTGATGACGGTGCTGGACTGGCTGACCAATCCGTGGGAACCGTACAAACGCGGGATTATGATCGGCTTTGATTCCAGCATGGATTACGCATGGATATATCGTTCGATACTGGAAAGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTACGACGCGATGAATAAAGGCATTTTCAAAGACCTAACCAAACATACTGATGTGATCCTGAAAAAATCGTATGAAGTGATGCATGGGGAATTGGGGAATGTGGATTCGATCCAGAGCTGGTCGAATGCGTAA", + "dna_sequence_length": 1479, + "functions": [ + "putative kinase" + ], + "id": "CDS_2738", + "location": [ + [ + "NC_000913", + 2901896, + "+", + 1479 + ] + ], + "md5": "f77e9918eebe814643de7fb150d46912", + "parent_gene": "", + "protein_md5": "f585bfee6898d20951cb16e2bd3d11e3", + "protein_translation": "MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA", + "protein_translation_length": 492, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009101" + ], + [ + "gene_synonym", + "ECK2771" + ], + [ + "gene_synonym", + "EcoGene:EG13034" + ], + [ + "gene_synonym", + "GI:16130684" + ], + [ + "gene_synonym", + "GeneID:947527" + ], + [ + "gene_synonym", + "JW2748" + ], + [ + "gene_synonym", + "NP_417257.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64554" + ], + [ + "gene_synonym", + "b2777" + ], + [ + "gene_synonym", + "queE" + ], + [ + "gene_synonym", + "ygcF" + ] + ], + "dna_sequence": "ATGCAGTACCCGATTAACGAGATGTTCCAGACCCTGCAAGGTGAGGGTTACTTTACCGGCGTTCCCGCCATTTTTATTCGTTTACAGGGATGCCCGGTTGGCTGTGCCTGGTGCGACACCAAACACACCTGGGAAAAGCTTGAGGATCGGGAAGTCTCCCTTTTCAGCATTCTGGCGAAGACCAAAGAGAGTGATAAGTGGGGGGCTGCGAGCAGTGAAGATTTGCTGGCTGTCATTGGTCGCCAGGGATACACCGCGCGGCATGTGGTGATTACGGGTGGTGAGCCTTGCATTCATGATTTGCTGCCACTGACTGATCTGCTCGAAAAGAACGGTTTTAGCTGCCAGATCGAAACCAGTGGTACTCATGAGGTACGCTGCACACCGAATACCTGGGTTACCGTATCGCCAAAGCTGAACATGCGCGGCGGCTATGAAGTGTTGTCACAGGCACTGGAGCGAGCCAACGAAATCAAGCATCCAGTGGGGCGCGTACGCGATATTGAAGCACTGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGA", + "dna_sequence_length": 672, + "functions": [ + "7-carboxy-7-deazaguanine synthase", + "queosine biosynthesis" + ], + "id": "CDS_2739", + "location": [ + [ + "NC_000913", + 2905418, + "-", + 672 + ] + ], + "md5": "4ab31abdc452d6f15f69ec310ace34cc", + "parent_gene": "", + "protein_md5": "be27e644b13994f36f3bfab71de706cc", + "protein_translation": "MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4497" + ], + [ + "gene_synonym", + "EcoGene:EG14487" + ], + [ + "gene_synonym", + "GI:226524742" + ], + [ + "gene_synonym", + "GeneID:7751618" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P612" + ], + [ + "gene_synonym", + "YP_002791252.1" + ], + [ + "gene_synonym", + "b4682" + ], + [ + "gene_synonym", + "yqcG" + ] + ], + "dna_sequence": "ATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAATATAAAATTACCGATGCCGCCGTCAATTTATTTATCCAGATTTAA", + "dna_sequence_length": 141, + "functions": [ + "membrane stress resistance protein" + ], + "id": "CDS_2740", + "location": [ + [ + "NC_000913", + 2905557, + "+", + 141 + ] + ], + "md5": "16be89bc2f3407ca6149c308da9245d3", + "parent_gene": "", + "protein_md5": "acce6f5638d574b76b07483d742adee4", + "protein_translation": "MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009108" + ], + [ + "gene_synonym", + "ECK2772" + ], + [ + "gene_synonym", + "EcoGene:EG13035" + ], + [ + "gene_synonym", + "GI:90111490" + ], + [ + "gene_synonym", + "GeneID:945247" + ], + [ + "gene_synonym", + "JW5445" + ], + [ + "gene_synonym", + "NP_417258.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55140" + ], + [ + "gene_synonym", + "b2778" + ], + [ + "gene_synonym", + "ygcG" + ] + ], + "dna_sequence": "ATGCGCTATTTCATACTAATGTTCACTTTCGTATGTTCCTTTGTTGCAGCCCAACCAACTATTGTCCCACAATTACAGCAACAAGTTACGGATCTTACGAGTAGCTTAAACTCACAAGAAAAGAAAGAACTGACGCACAAGTTAGAATCTATTTTCAATAATACCCAAGTGCAAATTGCCGTATTAATTGTTCCCACAACCAAAGACGAGACAATTGAACAATATGCTACAAGAGTTTTTGACAATTGGCGTTTAGGAGATGCCAAACGTAATGATGGGATACTGATCGTTGTTGCCTGGTCGGATCGCACTGTCCGCATCCAGGTAGGTTATGGGCTGGAAGAAAAGGTAACCGATGCTCTGGCTGGAGATATCATCCGTAGCAACATGATACCCGCATTTAAACAACAAAAATTAGCTAAGGGATTAGAGCTAGCTATAAACGCTTTGAATAACCAACTCACTTCACAACACCAATATCCGACTAATCCTTCAGAAAGTGAATCAGCGTCTTCCAGTGATCATTATTACTTTGCTATTTTTTGGGTATTTGCAGTGATGTTCTTCCCTTTCTGGTTTTTTCATCAAGGCAGTAATTTTTGTCGCGCATGTAAAAGTGGAGTCTGTATTTCAGCAATCTATCTTTTAGATTTATTCCTGTTCTCCGATAAAATTTTTTCCATTGCTGTATTTTCCTTCTTTTTTACTTTCACCATATTTATGGTCTTTACCTGTTTATGTGTACTTCAGAAAAGAGCATCTGGTAGAAGTTATCATTCAGACAACAGCGGTTCCGCTGGAGGCTCAGATAGCGGCGGATTTAGCGGCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGCCGCTGGTAA", + "dna_sequence_length": 873, + "functions": [ + "TPM domain protein, putative phosphatase" + ], + "id": "CDS_2741", + "location": [ + [ + "NC_000913", + 2905711, + "+", + 873 + ] + ], + "md5": "6c3fdef7972282854e89ea2f1f101d1c", + "parent_gene": "", + "protein_md5": "80853f16b243718772566cac3aa59cb5", + "protein_translation": "MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009110" + ], + [ + "gene_synonym", + "ECK2773" + ], + [ + "gene_synonym", + "EcoGene:EG10258" + ], + [ + "gene_synonym", + "GI:16130686" + ], + [ + "gene_synonym", + "GeneID:945032" + ], + [ + "gene_synonym", + "JW2750" + ], + [ + "gene_synonym", + "NP_417259.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6P9" + ], + [ + "gene_synonym", + "b2779" + ], + [ + "gene_synonym", + "eno" + ] + ], + "dna_sequence": "ATGTCCAAAATCGTAAAAATCATCGGTCGTGAAATCATCGACTCCCGTGGTAACCCGACTGTTGAAGCCGAAGTACATCTGGAGGGTGGTTTCGTCGGTATGGCAGCTGCTCCGTCAGGTGCTTCTACTGGTTCCCGTGAAGCTCTGGAACTGCGCGATGGCGACAAATCCCGTTTCCTGGGTAAAGGCGTAACCAAAGCTGTTGCTGCGGTAAACGGCCCGATCGCTCAGGCGCTGATTGGCAAAGATGCTAAAGATCAGGCTGGCATTGACAAGATCATGATCGACCTGGACGGCACCGAAAACAAATCCAAATTCGGCGCGAACGCAATCCTGGCTGTATCTCTGGCTAACGCCAAAGCTGCTGCAGCTGCTAAAGGTATGCCGCTGTACGAGCACATCGCTGAACTGAACGGTACTCCGGGCAAATACTCTATGCCGGTTCCGATGATGAACATCATCAACGGTGGTGAGCACGCTGACAACAACGTTGATATCCAGGAATTCATGATTCAGCCGGTTGGCGCGAAAACTGTGAAAGAAGCCATCCGCATGGGTTCTGAAGTTTTCCATCACCTGGCAAAAGTTCTGAAAGCGAAAGGCATGAACACTGCTGTTGGTGACGAAGGTGGCTATGCGCCGAACCTGGGTTCCAACGCTGAAGCTCTGGCTGTTATCGCTGAAGCTGTTAAAGCTGCTGGTTATGAACTGGGCAAAGACATCACTTTGGCGATGGACTGCGCAGCTTCTGAATTCTACAAAGATGGTAAATACGTTCTGGCTGGCGAAGGCAACAAAGCGTTCACCTCTGAAGAATTCACTCACTTCCTGGAAGAACTGACCAAACAGTACCCGATCGTTTCTATCGAAGACGGTCTGGACGAATCTGACTGGGACGGTTTCGCATACCAGACCAAAGTTCTGGGCGACAAAATCCAGCTGGTTGGTGACGACCTGTTCGTAACCAACACCAAGATCCTGAAAGAAGGTATCGAAAAAGGTATCGCTAACTCCATCCTGATCAAATTCAACCAGATCGGTTCTCTGACCGAAACTCTGGCTGCAATCAAGATGGCGAAAGATGCTGGCTACACTGCAGTTATCTCTCACCGTTCTGGCGAAACTGAAGACGCTACCATCGCTGACCTGGCTGTTGGTACTGCTGCAGGCCAGATCAAAACTGGTTCTATGAGCCGTTCTGACCGTGTTGCTAAATACAACCAGCTGATTCGTATCGAAGAAGCTCTGGGCGAAAAAGCACCGTACAACGGTCGTAAAGAGATCAAAGGCCAGGCATAA", + "dna_sequence_length": 1299, + "functions": [ + "enolase" + ], + "id": "CDS_2742", + "location": [ + [ + "NC_000913", + 2907941, + "-", + 1299 + ] + ], + "md5": "3fb45290340f0c5b809cad329255c47f", + "parent_gene": "", + "protein_md5": "d196eab62d33c61927f63166a310bad3", + "protein_translation": "MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009112" + ], + [ + "gene_synonym", + "ECK2774" + ], + [ + "gene_synonym", + "EcoGene:EG10810" + ], + [ + "gene_synonym", + "GI:16130687" + ], + [ + "gene_synonym", + "GeneID:946116" + ], + [ + "gene_synonym", + "JW2751" + ], + [ + "gene_synonym", + "NP_417260.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E5" + ], + [ + "gene_synonym", + "b2780" + ], + [ + "gene_synonym", + "pyrG" + ] + ], + "dna_sequence": "ATGACAACGAACTATATTTTTGTGACCGGCGGGGTCGTATCCTCTCTGGGTAAAGGCATTGCCGCAGCCTCCCTCGCAGCCATTCTTGAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAGCCCAATCCAACACGGGGAAGTGTTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCGCAACCGTGCAGGTTATTCCGCACATCACTAACGCAATCAAAGAGCGCGTGCTGGAAGGTGGCGAAGGTCATGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGAAGTCAAAACCAAACCGACTCAGCACTCTGTAAAAGAGCTGCTCTCCATCGGTATCCAGCCTGACATCCTGATTTGTCGTTCAGATCGCGCTGTTCCGGCGAACGAACGTGCGAAGATTGCATTGTTCTGTAATGTTCCGGAAAAAGCGGTTATTTCTCTGAAAGACGTCGATTCCATCTATAAAATTCCGGGCCTGTTGAAATCTCAGGGGCTGGACGATTATATTTGTAAACGATTCAGCTTAAACTGCCCGGAAGCGAATCTGTCCGAATGGGAACAGGTTATCTTCGAAGAAGCGAACCCGGTAAGTGAAGTCACCATCGGTATGGTCGGCAAGTACATTGAACTGCCGGATGCTTATAAATCAGTGATCGAAGCACTGAAACACGGTGGGCTGAAGAATCGTGTCAGCGTCAACATCAAACTGATCGATTCACAAGATGTTGAAACGCGCGGCGTTGAAATCCTTAAAGGTCTGGACGCAATCCTCGTACCTGGCGGTTTCGGCTATCGTGGCGTAGAAGGCATGATTACGACCGCGCGTTTTGCGCGTGAGAACAATATTCCTTATCTGGGCATTTGCCTGGGTATGCAGGTGGCGTTAATTGATTACGCTCGCCATGTTGCCAACATGGAGAACGCCAACTCTACGGAATTTGTGCCAGACTGTAAGTACCCGGTTGTGGCGCTGATTACCGAGTGGCGCGATGAAAACGGCAACGTTGAAGTTCGTAGCGAGAAGAGCGATCTCGGCGGTACCATGCGTCTCGGCGCACAGCAGTGCCAGTTGGTTGACGATAGCCTGGTTCGCCAGCTGTACAATGCGCCGACAATTGTTGAGCGTCATCGTCACCGTTACGAAGTCAACAACATGCTGTTGAAACAGATTGAAGATGCAGGTCTGCGCGTTGCGGGCCGTTCCGGGGATGATCAGTTGGTCGAGATCATCGAAGTTCCGAATCACCCGTGGTTCGTGGCTTGCCAGTTCCATCCGGAGTTTACTTCTACTCCACGTGATGGTCACCCGCTGTTTGCAGGCTTTGTGAAAGCCGCCAGCGAGTTCCAGAAACGTCAGGCGAAGTAA", + "dna_sequence_length": 1638, + "functions": [ + "CTP synthetase" + ], + "id": "CDS_2743", + "location": [ + [ + "NC_000913", + 2909666, + "-", + 1638 + ] + ], + "md5": "c86b92e495b0dcbcea8a63ac90a6fc30", + "parent_gene": "", + "protein_md5": "65fa8534717f4498012197a9bedf951b", + "protein_translation": "MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK", + "protein_translation_length": 545, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009117" + ], + [ + "gene_synonym", + "ECK2775" + ], + [ + "gene_synonym", + "EcoGene:EG10572" + ], + [ + "gene_synonym", + "GI:16130688" + ], + [ + "gene_synonym", + "GeneID:947254" + ], + [ + "gene_synonym", + "JW2752" + ], + [ + "gene_synonym", + "NP_417261.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEY3" + ], + [ + "gene_synonym", + "b2781" + ], + [ + "gene_synonym", + "mazG" + ] + ], + "dna_sequence": "ATGAATCAAATCGACCGTTTGCTCACTATTATGCAGCGCCTGCGCGATCCGGAAAACGGCTGCCCGTGGGATAAAGAGCAGACATTTGCCACCATTGCGCCTTACACCCTTGAAGAAACCTACGAAGTGCTGGACGCCATCGCCCGTGAAGATTTTGACGATCTTCGCGGTGAACTGGGCGATCTGCTATTCCAGGTGGTGTTTTACGCGCAAATGGCTCAGGAAGAAGGGCGCTTTGACTTTAATGATATTTGCGCTGCTATTAGCGATAAATTAGAGCGTCGCCATCCGCATGTTTTTGCTGATAGTTCTGCCGAAAACAGTAGTGAAGTGCTTGCCCGTTGGGAGCAAATCAAAACCGAAGAGCGCGCGCAGAAAGCGCAGCATTCGGCGCTGGACGATATTCCTCGTAGTTTACCGGCTTTAATGCGTGCGCAAAAAATCCAGAAACGTTGCGCCAACGTTGGCTTCGATTGGACGACGCTTGGTCCGGTAGTCGATAAAGTCTACGAAGAGATCGACGAGGTGATGTACGAAGCGCGGCAGGCTGTTGTCGACCAGGCTAAACTGGAGGAGGAAATGGGGGACCTGCTGTTTGCCACGGTTAATCTGGCTCGCCATTTAGGGACGAAAGCAGAAATCGCATTGCAAAAAGCGAACGAAAAATTCGAGCGTCGTTTTCGCGAAGTGGAGCGTATTGTTGCCGCGCGTGGACTGGAAATGACAGGTGTTGACCTCGAAACAATGGAAGAAGTCTGGCAACAGGTAAAACGGCAGGAAATTGATCTCTAA", + "dna_sequence_length": 792, + "functions": [ + "nucleoside triphosphate pyrophosphohydrolase" + ], + "id": "CDS_2744", + "location": [ + [ + "NC_000913", + 2910685, + "-", + 792 + ] + ], + "md5": "8b7614de946e4229d5c1b8fc06ffd370", + "parent_gene": "", + "protein_md5": "ec01619fed400826cae674b7f50e4800", + "protein_translation": "MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009119" + ], + [ + "gene_synonym", + "ECK2776" + ], + [ + "gene_synonym", + "EcoGene:EG11249" + ], + [ + "gene_synonym", + "GI:16130689" + ], + [ + "gene_synonym", + "GeneID:947252" + ], + [ + "gene_synonym", + "JW2753" + ], + [ + "gene_synonym", + "NP_417262.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE70" + ], + [ + "gene_synonym", + "b2782" + ], + [ + "gene_synonym", + "chpA" + ], + [ + "gene_synonym", + "chpAK" + ], + [ + "gene_synonym", + "mazF" + ] + ], + "dna_sequence": "ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGGACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGCAATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGTATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAACGTACTGATTGGGTAG", + "dna_sequence_length": 336, + "functions": [ + "mRNA interferase toxin, antitoxin is MazE" + ], + "id": "CDS_2745", + "location": [ + [ + "NC_000913", + 2911091, + "-", + 336 + ] + ], + "md5": "31641dd8fd30a2a9356d33df41376857", + "parent_gene": "", + "protein_md5": "2d2ac8345144c9aa328a5b8b633fd297", + "protein_translation": "MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009122" + ], + [ + "gene_synonym", + "ECK2777" + ], + [ + "gene_synonym", + "EcoGene:EG10571" + ], + [ + "gene_synonym", + "GI:16130690" + ], + [ + "gene_synonym", + "GeneID:947245" + ], + [ + "gene_synonym", + "JW2754" + ], + [ + "gene_synonym", + "NP_417263.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE72" + ], + [ + "gene_synonym", + "b2783" + ], + [ + "gene_synonym", + "chpAI" + ], + [ + "gene_synonym", + "chpR" + ], + [ + "gene_synonym", + "mazE" + ], + [ + "gene_synonym", + "tasA" + ] + ], + "dna_sequence": "ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCTGAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTACGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAAGTCTGGTAA", + "dna_sequence_length": 249, + "functions": [ + "antitoxin of the ChpA-ChpR toxin-antitoxin system" + ], + "id": "CDS_2746", + "location": [ + [ + "NC_000913", + 2911339, + "-", + 249 + ] + ], + "md5": "a941eb889371d9849b0f4d65413feaeb", + "parent_gene": "", + "protein_md5": "b60b0b68dbe3564a1262cfea82549c27", + "protein_translation": "MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009125" + ], + [ + "gene_synonym", + "ECK2778" + ], + [ + "gene_synonym", + "EcoGene:EG10835" + ], + [ + "gene_synonym", + "GI:16130691" + ], + [ + "gene_synonym", + "GeneID:947244" + ], + [ + "gene_synonym", + "JW2755" + ], + [ + "gene_synonym", + "NP_417264.1" + ], + [ + "gene_synonym", + "RC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG20" + ], + [ + "gene_synonym", + "b2784" + ], + [ + "gene_synonym", + "relA" + ] + ], + "dna_sequence": "ATGGTTGCGGTAAGAAGTGCACATATCAATAAGGCTGGTGAATTTGATCCGGAAAAATGGATCGCAAGTCTGGGTATTACCAGCCAGAAGTCGTGTGAGTGCTTAGCCGAAACCTGGGCGTATTGTCTGCAACAGACGCAGGGGCATCCGGATGCCAGTCTGTTATTGTGGCGTGGTGTTGAGATGGTGGAGATCCTCTCGACATTAAGTATGGACATTGACACGCTGCGGGCGGCGCTGCTTTTCCCTCTGGCGGATGCCAACGTAGTCAGCGAAGATGTGCTGCGTGAGAGCGTCGGTAAGTCGGTCGTTAACCTTATTCACGGCGTGCGTGATATGGCGGCGATCCGCCAGCTGAAAGCGACGCACACTGATTCTGTTTCCTCCGAACAGGTCGATAACGTTCGCCGGATGTTATTGGCGATGGTCGATGATTTTCGCTGCGTAGTCATCAAACTGGCGGAGCGTATTGCTCATCTGCGCGAAGTAAAAGATGCGCCGGAAGATGAACGTGTACTGGCGGCAAAAGAGTGTACCAACATCTACGCACCGCTGGCTAACCGTCTCGGAATCGGACAACTGAAATGGGAACTGGAAGATTACTGCTTCCGTTACCTCCATCCAACCGAATACAAACGAATTGCCAAACTGCTGCATGAACGGCGTCTCGACCGCGAACACTACATCGAAGAGTTCGTTGGTCATCTGCGCGCTGAGATGAAAGCTGAAGGCGTTAAAGCGGAAGTGTATGGTCGTCCGAAACACATCTACAGCATCTGGCGTAAAATGCAGAAAAAGAACCTCGCCTTTGATGAGCTGTTTGATGTGCGTGCGGTACGTATTGTCGCCGAGCGTTTACAGGATTGCTATGCCGCACTGGGGATAGTGCACACTCACTATCGCCACCTGCCGGATGAGTTTGACGATTACGTCGCTAACCCGAAACCAAACGGTTATCAGTCTATTCATACCGTGGTTCTGGGGCCGGGTGGAAAAACCGTTGAGATCCAAATCCGCACCAAACAGATGCATGAAGATGCAGAGTTGGGTGTTGCTGCGCACTGGAAATATAAAGAGGGCGCGGCTGCTGGCGGCGCACGTTCGGGACATGAAGACCGGATTGCCTGGCTGCGTAAACTGATTGCGTGGCAGGAAGAGATGGCTGATTCCGGCGAAATGCTCGACGAAGTACGTAGTCAGGTCTTTGACGACCGGGTGTACGTCTTTACGCCGAAAGGTGATGTCGTTGATTTGCCTGCGGGATCAACGCCGCTGGACTTCGCTTACCACATCCACAGTGATGTCGGACACCGCTGCATCGGGGCAAAAATTGGCGGGCGCATTGTGCCGTTCACCTACCAGCTGCAGATGGGCGACCAGATTGAAATTATCACCCAGAAACAGCCGAACCCCAGCCGTGACTGGTTAAACCCAAACCTCGGTTACGTCACAACCAGCCGTGGGCGTTCGAAAATTCACGCCTGGTTCCGTAAACAGGACCGTGACAAAAACATTCTGGCTGGGCGGCAAATCCTTGACGACGAGCTGGAACATCTGGGGATCAGCCTGAAAGAAGCAGAAAAACATCTGCTGCCGCGTTACAACTTCAATGATGTCGACGAGTTGCTGGCGGCGATTGGTGGCGGGGATATCCGTCTCAATCAGATGGTGAACTTCCTGCAATCGCAATTTAATAAGCCGAGTGCCGAAGAGCAGGACGCCGCCGCGCTGAAGCAACTTCAGCAAAAAAGCTACACGCCGCAAAACCGCAGTAAAGATAACGGTCGCGTGGTAGTCGAAGGTGTTGGCAACCTGATGCACCACATCGCGCGCTGCTGCCAGCCGATTCCTGGAGATGAGATTGTCGGCTTCATTACCCAGGGGCGCGGTATTTCAGTACACCGCGCCGATTGCGAACAACTGGCGGAACTGCGCTCCCATGCGCCAGAACGCATTGTTGACGCGGTATGGGGTGAGAGCTACTCCGCCGGATATTCGCTGGTGGTCCGCGTGGTAGCTAATGATCGTAGTGGGTTGTTACGTGATATCACGACCATTCTCGCCAACGAGAAGGTGAACGTGCTTGGCGTTGCCAGCCGTAGCGACACCAAACAGCAACTGGCGACCATCGACATGACCATTGAGATTTACAACCTGCAAGTGCTGGGGCGCGTGCTGGGTAAACTCAACCAGGTGCCGGATGTTATCGACGCGCGTCGGTTGCACGGGAGTTAG", + "dna_sequence_length": 2235, + "functions": [ + "(p)ppGpp synthetase I/GTP pyrophosphokinase" + ], + "id": "CDS_2747", + "location": [ + [ + "NC_000913", + 2913651, + "-", + 2235 + ] + ], + "md5": "3b59f0cfeac33990a204485abd7a5193", + "parent_gene": "", + "protein_md5": "49ff6fc65ed111112ee76be427a82132", + "protein_translation": "MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS", + "protein_translation_length": 744, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009127" + ], + [ + "gene_synonym", + "ECK2779" + ], + [ + "gene_synonym", + "EcoGene:EG11247" + ], + [ + "gene_synonym", + "GI:16130692" + ], + [ + "gene_synonym", + "GeneID:947243" + ], + [ + "gene_synonym", + "JW2756" + ], + [ + "gene_synonym", + "NP_417265.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55135" + ], + [ + "gene_synonym", + "b2785" + ], + [ + "gene_synonym", + "rlmD" + ], + [ + "gene_synonym", + "rumA" + ], + [ + "gene_synonym", + "ygcA" + ] + ], + "dna_sequence": "ATGGCGCAATTCTACTCTGCAAAACGACGCACGACGACGCGTCAGATCATAACCGTTTCAGTCAACGACCTCGACTCTTTTGGTCAGGGCGTGGCGCGACATAACGGCAAAACGCTATTTATCCCCGGATTATTGCCGCAGGAAAACGCGGAAGTTACTGTTACTGAAGATAAAAAACAGTATGCCCGCGCTAAAGTCGTACGCCGGTTAAGCGATAGCCCGGAACGCGAAACGCCACGCTGTCCTCATTTTGGCGTATGCGGTGGCTGTCAGCAACAACACGCCAGCGTGGATTTACAGCAGCGAAGCAAAAGTGCGGCACTCGCCCGATTAATGAAACACGATGTCTCTGAAGTGATCGCCGATGTTCCCTGGGGCTATCGCCGTCGCGCGCGTTTAAGTCTGAACTACTTACCGAAAACACAGCAACTTCAGATGGGGTTTCGCAAAGCGGGCTCCAGTGACATTGTCGACGTCAAACAATGCCCCATTTTAGCGCCCCAACTTGAAGCATTGCTGCCCAAAGTCAGGGCATGTCTGGGCAGCTTACAAGCTATGCGCCATCTTGGTCATGTTGAACTGGTACAGGCAACCAGCGGCACGCTGATGATTTTGCGCCATACCGCACCGCTAAGTTCGGCAGATCGCGAAAAACTGGAACGCTTTTCGCATTCTGAAGGCCTGGATCTGTATCTCGCCCCCGATAGTGAGATACTCGAAACCGTCTCTGGTGAGATGCCCTGGTATGACTCAAACGGGTTGCGCTTAACTTTTAGCCCGCGCGATTTTATTCAGGTCAATGCGGGTGTGAACCAAAAAATGGTAGCGCGTGCGTTGGAATGGCTGGATGTGCAACCTGAAGATCGCGTACTGGATCTGTTCTGCGGTATGGGCAACTTTACACTGCCATTGGCGACACAAGCTGCCAGTGTGGTCGGTGTAGAAGGTGTTCCGGCGCTGGTGGAAAAAGGCCAGCAGAATGCGCGTCTTAATGGCTTACAGAATGTGACGTTTTATCACGAAAATCTTGAAGAAGATGTCACAAAGCAGCCGTGGGCGAAAAACGGCTTCGATAAAGTGTTGCTGGACCCGGCGCGAGCAGGTGCCGCAGGTGTTATGCAGCAAATTATAAAACTGGAACCTATTCGTATAGTTTATGTATCCTGTAACCCTGCAACGCTGGCTCGGGATAGCGAAGCGTTATTAAAAGCAGGATATACCATTGCGCGACTGGCGATGCTGGATATGTTCCCACACACGGGACATCTGGAATCGATGGTACTTTTCTCGCGCGTTAAATAG", + "dna_sequence_length": 1302, + "functions": [ + "23S rRNA m(5)U1939 methyltransferase, SAM-dependent" + ], + "id": "CDS_2748", + "location": [ + [ + "NC_000913", + 2915000, + "-", + 1302 + ] + ], + "md5": "68762e9d538508804fba4f7a1361b850", + "parent_gene": "", + "protein_md5": "d0f438bed6ea9d58d8845b25d4471eef", + "protein_translation": "MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK", + "protein_translation_length": 433, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009131" + ], + [ + "gene_synonym", + "ECK2780" + ], + [ + "gene_synonym", + "EcoGene:EG11367" + ], + [ + "gene_synonym", + "GI:16130693" + ], + [ + "gene_synonym", + "GeneID:947255" + ], + [ + "gene_synonym", + "JW2757" + ], + [ + "gene_synonym", + "NP_417266.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC5" + ], + [ + "gene_synonym", + "airS" + ], + [ + "gene_synonym", + "b2786" + ], + [ + "gene_synonym", + "barA" + ], + [ + "gene_synonym", + "gacC" + ] + ], + "dna_sequence": "ATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGAGCCTGCAAAATCGCGAATCTATCGGTCAGTTAATAAGCGTACTGCATCGTCGCCATTCCGATATTGTTCGCGCGATTTCGGTTTATGATGAAAATAACCGACTCTTTGTCACCTCCAATTTTCATCTTGATCCCTCATCAATGCAGCTCGGCAGCAACGTGCCGTTTCCTCGCCAGCTCACTGTCACTCGTGACGGCGATATTATGATCCTCCGCACGCCGATTATTTCTGAGAGTTACTCCCCCGACGAATCGCCCAGTAGCGATGCCAAAAATAGTCAAAATATGTTGGGATATATTGCGCTGGAGCTGGATCTTAAATCGGTTCGCTTGCAGCAATATAAAGAGATCTTTATTTCCAGCGTGATGATGCTGTTTTGTATCGGTATTGCGCTTATTTTTGGCTGGCGCTTAATGCGCGATGTAACCGGTCCGATTCGCAACATGGTGAATACCGTCGACCGCATCCGTCGCGGGCAACTCGACAGCCGGGTGGAAGGATTTATGCTCGGCGAGCTGGATATGCTGAAAAACGGTATCAACTCGATGGCAATGTCGCTGGCTGCTTATCACGAAGAGATGCAGCACAATATCGACCAGGCGACGTCCGATCTGCGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACGAGCTGCGTACACCACTGAATGGTGTTATTGGCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGCAACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGAAATGGGCGGCGATATTTCGTTCCATAGCCAGCCGAATCGCGGTTCAACTTTCTGGTTCCACATTAATCTCGATCTGAACCCGAACATTATTATCGAAGGGCCATCCACCCAGTGCCTCGCAGGTAAGCGCCTGGCCTATGTCGAACCAAACTCCGCAGCAGCGCAATGCACGCTGGATATTTTAAGTGAAACGCCGCTGGAAGTGGTTTATAGCCCAACGTTCTCCGCGCTGCCTCCCGCGCATTACGACATGATGTTGTTAGGCATCGCGGTGACCTTCCGCGAGCCGCTAACAATGCAACATGAGCGATTAGCGAAAGCGGTATCGATGACCGATTTCCTGATGCTGGCACTTCCTTGCCATGCACAAGTCAATGCTGAAAAACTCAAGCAAGATGGTATCGGCGCGTGTCTGCTGAAACCATTAACACCTACACGCCTGTTGCCTGCCCTGACGGAATTTTGTCATCACAAACAAAACACGCTTTTGCCTGTAACCGATGAAAGTAAGCTGGCAATGACAGTCATGGCGGTTGATGACAACCCCGCTAACCTGAAACTTATCGGCGCATTGCTGGAAGATATGGTGCAACATGTGGAACTTTGCGATAGCGGGCATCAGGCGGTTGAACGGGCGAAACAGATGCCGTTCGATTTGATCTTAATGGATATTCAAATGCCGGACATGGATGGCATTCGGGCCTGCGAACTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAACGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGGATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGCGTCGTGACGCCCGAAGTCAACGAAATTGTGGTGAACCCGAATGCGACCCTCGACTGGCAACTGGCACTACGCCAGGCAGCAGGAAAAACCGATTTAGCGCGCGATATGCTGCAAATGTTACTCGATTTCCTGCCTGAAGTTCGCAACAAAGTTGAGGAACAGCTGGTTGGAGAAAACCCGGAAGGCCTGGTTGATTTGATTCATAAACTGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAA", + "dna_sequence_length": 2757, + "functions": [ + "hybrid sensory histidine kinase, in two-component regulatory system with UvrY" + ], + "id": "CDS_2749", + "location": [ + [ + "NC_000913", + 2915057, + "+", + 2757 + ] + ], + "md5": "16904aa11eb6277b786fc895d508473a", + "parent_gene": "", + "protein_md5": "72978632c51f18b6449e7f060a82d213", + "protein_translation": "MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG", + "protein_translation_length": 918, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009134" + ], + [ + "gene_synonym", + "ECK2781" + ], + [ + "gene_synonym", + "EcoGene:EG13167" + ], + [ + "gene_synonym", + "GI:16130694" + ], + [ + "gene_synonym", + "GeneID:947258" + ], + [ + "gene_synonym", + "JW2758" + ], + [ + "gene_synonym", + "NP_417267.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES2" + ], + [ + "gene_synonym", + "b2787" + ], + [ + "gene_synonym", + "gudD" + ], + [ + "gene_synonym", + "ygcX" + ] + ], + "dna_sequence": "ATGAGTTCTCAATTTACGACGCCTGTTGTTACTGAAATGCAGGTTATCCCGGTGGCGGGTCATGACAGTATGCTGATGAATCTGAGTGGTGCACACGCACCGTTCTTTACGCGTAATATTGTGATTATCAAAGATAATTCTGGTCACACTGGCGTAGGGGAAATTCCCGGCGGCGAGAAAATCCGTAAAACGCTGGAAGATGCGATTCCGCTGGTGGTAGGTAAAACGCTGGGTGAATACAAAAACGTTCTGACGCTGGTGCGTAATACTTTTGCCGATCGTGATGCTGGTGGGCGCGGTTTGCAGACATTTGACCTACGTACCACTATTCATGTAGTTACCGGGATAGAAGCGGCAATGCTGGATCTGCTGGGGCAGCATCTGGGGGTAAACGTGGCATCGCTGCTGGGCGATGGTCAACAGCGTAGCGAAGTCGAAATGCTCGGTTATCTGTTCTTCGTCGGTAATCGCAAAGCCACGCCGCTGCCGTATCAAAGCCAGCCGGATGACTCATGCGACTGGTATCGCCTGCGTCATGAAGAAGCGATGACGCCGGATGCGGTGGTGCGCCTGGCGGAAGCGGCATATGAAAAATATGGCTTCAACGATTTCAAACTGAAGGGCGGTGTACTGGCCGGGGAAGAAGAGGCCGAGTCTATTGTGGCACTGGCGCAACGCTTCCCGCAGGCGCGTATTACGCTCGATCCTAACGGTGCCTGGTCGCTGAACGAAGCGATTAAAATCGGTAAATACCTGAAAGGTTCGCTGGCTTATGCAGAAGATCCGTGTGGTGCGGAGCAAGGTTTCTCCGGGCGTGAAGTGATGGCAGAGTTCCGTCGCGCGACAGGTCTACCGACTGCAACCAATATGATCGCCACCGACTGGCGGCAAATGGGCCATACGCTCTCCCTGCAATCCGTTGATATCCCGCTGGCGGATCCGCATTTCTGGACAATGCAAGGTTCGGTACGTGTGGCGCAAATGTGCCATGAATTTGGCCTGACCTGGGGTTCACACTCTAACAACCACTTCGATATTTCCCTGGCGATGTTTACCCATGTTGCCGCCGCTGCACCGGGTAAAATTACTGCTATTGATACGCACTGGATTTGGCAGGAAGGCAATCAGCGCCTGACCAAAGAACCGTTTGAGATCAAAGGCGGGCTGGTACAGGTGCCAGAAAAACCGGGGCTGGGTGTAGAAATCGATATGGATCAAGTGATGAAAGCCCATGAGCTGTATCAGAAACACGGGCTTGGCGCGCGTGACGATGCGATGGGAATGCAGTATCTGATTCCTGGCTGGACGTTCGATAACAAGCGCCCGTGCATGGTGCGTTAA", + "dna_sequence_length": 1341, + "functions": [ + "D-glucarate dehydratase 1" + ], + "id": "CDS_2750", + "location": [ + [ + "NC_000913", + 2919385, + "-", + 1341 + ] + ], + "md5": "d438797c315c5449a4024fb4f6e903a9", + "parent_gene": "", + "protein_md5": "1a560486c877921f89e67a8d6fda2ed8", + "protein_translation": "MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009136" + ], + [ + "gene_synonym", + "ECK2782" + ], + [ + "gene_synonym", + "EcoGene:EG13168" + ], + [ + "gene_synonym", + "GI:16130695" + ], + [ + "gene_synonym", + "GeneID:947261" + ], + [ + "gene_synonym", + "JW2759" + ], + [ + "gene_synonym", + "NP_417268.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46915" + ], + [ + "gene_synonym", + "b2788" + ], + [ + "gene_synonym", + "gudX" + ], + [ + "gene_synonym", + "ygcY" + ] + ], + "dna_sequence": "ATGGCGACACAATCCAGTCCTGTTATTACTGATATGAAAGTCATTCCGGTGGCCGGGCATGACAGCATGTTGCTTAATATTGGTGGGGCACATAACGCATATTTCACCCGCAATATTGTGGTACTCACCGATAACGCCGGGCATACCGGCATTGGTGAAGCGCCGGGCGGAGATGTGATTTATCAGACGCTTGTCGATGCTATTCCGATGGTTCTGGGCCAGGAAGTTGCGCGACTGAATAAAGTGGTCCAGCAGGTGCATAAAGGTAATCAGGCCGCCGATTTTGATACCTTCGGTAAAGGTGCCTGGACCTTTGAATTACGCGTTAACGCCGTGGCGGCGCTGGAAGCCGCTTTGCTTGACCTGCTAGGTAAGGCGCTGAATGTTCCGGTCTGCGAACTGTTAGGGCCAGGCAAGCAACGCGAGGCTATTACCGTCCTCGGTTATCTGTTTTATATCGGTGATCGGACCAAAACCGATCTTCCTTATGTGGAAAATACGCCGGGCAACCATGAGTGGTATCAGTTGCGGCATCAGAAAGCAATGAACAGCGAAGCCGTTGTGCGTCTGGCGGAAGCCTCACAGGATCGCTACGGCTTTAAAGATTTCAAACTTAAGGGCGGCGTGTTACCTGGCGAGCAAGAAATCGACACTGTTCGTGCATTGAAGAAACGCTTCCCGGATGCGCGGATTACCGTTGATCCCAACGGTGCATGGCTGCTTGATGAAGCCATTTCTTTATGCAAAGGGCTGAATGATGTTCTTACCTATGCCGAAGATCCATGCGGCGCAGAACAGGGCTTCTCCGGACGTGAAGTGATGGCGGAATTTCGACGGGCGACCGGCTTGCCCGTCGCGACTAACATGATCGCCACCAACTGGCGCGAAATGGGTCATGCGGTGATGCTCAATGCGGTAGATATTCCACTTGCCGATCCGCACTTCTGGACGCTTTCCGGTGCAGTCCGTGTGGCGCAGCTTTGCGACGACTGGGGGCTGACCTGGGGCTGCCATTCTAATAACCATTTCGATATCTCTCTGGCGATGTTTACCCATGTGGGCGCGGCGGCACCGGGTAATCCTACCGCTATCGATACCCACTGGATTTGGCAGGAGGGCGATTGTCGCCTGACCCAAAATCCGCTGGAGATTAAAAACGGAAAAATTGCCGTTCCTGATGCGCCCGGTCTGGGCGTGGAACTGGACTGGGAACAGGTACAAAAGGCACATGAGGCCTATAAACGTCTGCCTGGCGGTGCGCGTAACGACGCAGGTCCGATGCAGTACCTGATCCCCGGCTGGACCTTTGACCGTAAACGTCCCGTTTTCGGCCGTCATTGA", + "dna_sequence_length": 1341, + "functions": [ + "glucarate dehydratase-related protein, substrate unknown" + ], + "id": "CDS_2751", + "location": [ + [ + "NC_000913", + 2920746, + "-", + 1341 + ] + ], + "md5": "fbb590ce0c33dd52cad670248e9d7127", + "parent_gene": "", + "protein_md5": "0904df1dbecdc5d9fd629e51d8828183", + "protein_translation": "MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTDLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVPDAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009139" + ], + [ + "gene_synonym", + "ECK2783" + ], + [ + "gene_synonym", + "EcoGene:EG13169" + ], + [ + "gene_synonym", + "GI:16130696" + ], + [ + "gene_synonym", + "GeneID:947265" + ], + [ + "gene_synonym", + "JW2760" + ], + [ + "gene_synonym", + "NP_417269.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46916" + ], + [ + "gene_synonym", + "b2789" + ], + [ + "gene_synonym", + "gudP" + ], + [ + "gene_synonym", + "ygcZ" + ] + ], + "dna_sequence": "ATGAGTTCTTTAAGTCAGGCTGCGAGCAGTGTGGAAAAACGCACAAATGCTCGTTACTGGATAGTGGTGATGTTGTTTATCGTCACATCCTTCAACTACGGCGACCGCGCTACGCTCTCTATCGCCGGTTCGGAAATGGCCAAAGATATCGGCCTTGATCCCGTGGGAATGGGCTATGTGTTCTCTGCTTTCTCATGGGCTTATGTTATCGGGCAGATCCCTGGTGGCTGGTTGCTGGACCGTTTTGGTTCAAAACGCGTCTACTTCTGGTCGATCTTTATCTGGTCGATGTTTACCTTGCTGCAAGGCTTCGTCGATATCTTTAGTGGATTCGGCATTATCGTTGCCCTGTTTACGCTGCGCTTCCTGGTCGGGCTTGCTGAAGCGCCATCTTTCCCCGGCAACAGTCGCATTGTTGCGGCCTGGTTTCCGGCGCAGGAAAGGGGAACGGCGGTGTCGATTTTTAACTCCGCTCAATACTTCGCAACGGTGATCTTCGCGCCGATTATGGGCTGGCTGACGCATGAAGTGGGCTGGTCACACGTCTTCTTCTTTATGGGCGGTCTGGGGATTGTCATCAGCTTTATCTGGTTGAAAGTCATCCACGAGCCAAATCAACATCCGGGGGTAAATAAGAAAGAGCTGGAGTACATCGCCGCGGGTGGTGCGCTGATCAATATGGATCAGCAAAACACCAAAGTTAAAGTGCCGTTCAGCGTGAAGTGGGGGCAGATCAAACAGCTGCTAGGGTCACGGATGATGATCGGCGTTTATATCGGTCAGTACTGTATCAACGCCCTGACTTACTTCTTTATTACCTGGTTCCCGGTTTATCTGGTGCAGGCACGCGGGATGTCGATTCTGAAAGCGGGCTTTGTGGCTTCCGTTCCGGCGGTTTGCGGTTTTATCGGCGGTGTGCTGGGTGGGATTATTTCCGACTGGCTGATGCGCCGCACGGGATCGCTGAACATTGCGCGTAAAACACCGATCGTAATGGGCATGTTGCTGTCGATGGTGATGGTGTTCTGCAACTACGTCAACGTTGAGTGGATGATCATCGGCTTTATGGCGCTGGCCTTCTTCGGTAAGGGCATCGGGGCGCTGGGTTGGGCAGTAATGGCAGATACCGCGCCAAAAGAGATCAGCGGTCTTTCCGGTGGCCTGTTCAACATGTTCGGTAACATTTCTGGCATCGTCACGCCAATCGCAATTGGTTATATCGTTGGCACGACTGGCTCGTTTAATGGGGCGCTGATTTATGTTGGTGTTCATGCCTTAATCGCGGTACTGAGCTACCTGGTGCTGGTGGGCGATATCAAGCGTATCGAGTTGAAACCTGTTGCGGGGCAATAA", + "dna_sequence_length": 1353, + "functions": [ + "putative D-glucarate transporter" + ], + "id": "CDS_2752", + "location": [ + [ + "NC_000913", + 2922100, + "-", + 1353 + ] + ], + "md5": "d0199c2728d9f84abe4e55e71fb39868", + "parent_gene": "", + "protein_md5": "5f62ce1fa85ea9d3bdc99de832c025f5", + "protein_translation": "MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009142" + ], + [ + "gene_synonym", + "ECK2784" + ], + [ + "gene_synonym", + "EcoGene:EG13170" + ], + [ + "gene_synonym", + "GI:16130697" + ], + [ + "gene_synonym", + "GeneID:947151" + ], + [ + "gene_synonym", + "JW2761" + ], + [ + "gene_synonym", + "NP_417270.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65367" + ], + [ + "gene_synonym", + "b2790" + ], + [ + "gene_synonym", + "yqcA" + ] + ], + "dna_sequence": "ATGGCGGAAATTGGTATTTTTGTCGGCACCATGTACGGGAATTCACTGTTAGTGGCCGAAGAAGCGGAAGCGATTCTGACCGCGCAGGGCCACAAAGCAACGGTATTTGAAGATCCTGAATTAAGCGACTGGCTGCCCTATCAGGATAAGTATGTTCTGGTGGTTACGTCCACGACCGGGCAGGGCGACCTTCCTGATAGCATTGTGCCACTCTTTCAGGGAATCAAAGATAGTCTGGGCTTCCAGCCGAATCTGCGTTATGGCGTGATTGCGCTCGGCGACAGTAGTTATGTGAATTTCTGCAATGGCGGCAAACAGTTCGATGCCTTGTTGCAGGAACAGAGCGCTCAGCGGGTTGGCGAAATGCTGTTGATTGACGCCAGTGAGAACCCGGAACCGGAAACGGAATCAAATCCGTGGGTCGAACAGTGGGGCACGCTGTTGTCCTGA", + "dna_sequence_length": 450, + "functions": [ + "short-chain flavodoxin, FMN-binding" + ], + "id": "CDS_2753", + "location": [ + [ + "NC_000913", + 2922984, + "-", + 450 + ] + ], + "md5": "be205ccbb2ac4cd6fadac2d629def838", + "parent_gene": "", + "protein_md5": "651d9dd0277f92135bc00f3b2e33d0bb", + "protein_translation": "MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009147" + ], + [ + "gene_synonym", + "ECK2785" + ], + [ + "gene_synonym", + "EcoGene:EG13171" + ], + [ + "gene_synonym", + "GI:16130698" + ], + [ + "gene_synonym", + "GeneID:947242" + ], + [ + "gene_synonym", + "JW2762" + ], + [ + "gene_synonym", + "NP_417271.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA41" + ], + [ + "gene_synonym", + "b2791" + ], + [ + "gene_synonym", + "truC" + ], + [ + "gene_synonym", + "yqcB" + ] + ], + "dna_sequence": "ATGCTGGAAATACTCTATCAGGATGAATGGCTGGTTGCGGTAAATAAACCCTCCGGCTGGCTGGTTCACCGCAGCTGGCTGGATCGCGACGAGAAAGTAGTGGTCATGCAAACCGTGCGTGACCAGATAGGCCAGCATGTTTTTACTGCTCATCGTCTGGACCGACCCACTTCTGGTGTGTTGTTGATGGGATTATCCAGCGAGGCCGGACGGCTGCTGGCACAACAGTTTGAACAGCACCAAATCCAGAAACGTTACCATGCGATTGTGCGCGGCTGGTTGATGGAAGAAGCGGTGCTGGATTATCCACTGGTGGAAGAACTGGACAAAATCGCTGATAAATTTGCCCGCGAAGATAAAGGCCCGCAGCCAGCAGTGACGCATTATCGCGGTCTGGCGACCGTAGAAATGCCGGTAGCGACCGGACGTTACCCGACCACGCGCTACGGCCTGGTGGAACTGGAGCCGAAAACCGGACGCAAACATCAGCTTCGCCGACATCTTGCCCATTTGCGTCATCCGATTATTGGCGATAGCAAACATGGCGATTTACGCCAGAATCGCAGCGGTGCTGAGCATTTTGGCCTCCAGCGGTTAATGCTACATGCCAGTCAGTTGTCATTGACGCATCCTTTTACTGGCGAGCCGCTGACTATTCACGCGGGCCTGGACGACACCTGGATGCAGGCGTTATCACAATTTGGCTGGCGCGGTCTGCTTCCTGAAAATGAAAGGGTTGAGTTCAGTGCGCCATCGGGTCAGGATGGAGAGATAAGTTCCTAA", + "dna_sequence_length": 783, + "functions": [ + "tRNA(Ile1,Asp) pseudouridine(65) synthase" + ], + "id": "CDS_2754", + "location": [ + [ + "NC_000913", + 2923784, + "-", + 783 + ] + ], + "md5": "6cb5a0a64cc71eed5da18056b1840b77", + "parent_gene": "", + "protein_md5": "a8fb5626a2f442e57e7a2c011a3033c4", + "protein_translation": "MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009152" + ], + [ + "gene_synonym", + "ECK2786" + ], + [ + "gene_synonym", + "EcoGene:EG13172" + ], + [ + "gene_synonym", + "GI:16130699" + ], + [ + "gene_synonym", + "GeneID:946027" + ], + [ + "gene_synonym", + "JW2763" + ], + [ + "gene_synonym", + "NP_417272.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46919" + ], + [ + "gene_synonym", + "b2792" + ], + [ + "gene_synonym", + "yqcC" + ] + ], + "dna_sequence": "ATGACCACTCATGACCGCGTTCGTCTCCAGTTGCAGGCGCTTGAAGCGTTACTGCGTGAACATCAGCACTGGCGAAACGATGAACCCCAGCCGCATCAATTTAATAGTACCCAACCGTTCTTTATGGACACCATGGAACCACTGGAGTGGTTGCAGTGGGTGCTGATCCCGCGAATGCACGATTTGTTAGATAACAAACAGCCGTTACCGGGCGCTTTTGCCGTTGCACCCTATTATGAAATGGCGCTGGCGACGGACCATCCGCAACGCGCGCTTATTCTGGCTGAGCTGGAAAAACTGGATGCTCTTTTTGCGGATGATGCGAGCTAA", + "dna_sequence_length": 330, + "functions": [ + "DUF446 family protein" + ], + "id": "CDS_2755", + "location": [ + [ + "NC_000913", + 2924113, + "-", + 330 + ] + ], + "md5": "28ad6a35ebf78a5762fcf29cbeb54392", + "parent_gene": "", + "protein_md5": "7babfaf597ce601a39d3ee904173cb07", + "protein_translation": "MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009154" + ], + [ + "gene_synonym", + "ECK2788" + ], + [ + "gene_synonym", + "EcoGene:EG12959" + ], + [ + "gene_synonym", + "GI:16130700" + ], + [ + "gene_synonym", + "GeneID:947271" + ], + [ + "gene_synonym", + "JW2764" + ], + [ + "gene_synonym", + "NP_417273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8U0" + ], + [ + "gene_synonym", + "b2793" + ], + [ + "gene_synonym", + "syd" + ], + [ + "gene_synonym", + "ydr" + ] + ], + "dna_sequence": "GTGGACGATTTGACCGCACAAGCCCTGAAAGATTTTACTGCACGCTACTGCGATGCGTGGCATGAAGAGCATAAAAGCTGGCCGTTAAGTGAGGAACTGTACGGTGTTCCTTCACCGTGCATTATTTCAACTACCGAAGATGCCGTATACTGGCAACCCCAGCCGTTTACCGGGGAACAAAATGTAAACGCGGTTGAACGCGCTTTTGATATTGTGATACAACCCACAATTCATACCTTTTATACGACTCAGTTTGCCGGGGATATGCACGCGCAGTTTGGCGATATCAAACTGACATTGCTGCAAACCTGGAGTGAAGACGACTTCCGTCGGGTGCAGGAAAATCTGATTGGTCATCTGGTGACTCAGAAAAGGCTAAAACTGCCGCCCACACTATTTATCGCGACGCTGGAAGAAGAGTTAGAGGTCATCTCGGTGTGTAATCTCTCCGGTGAAGTGTGCAAAGAGACGCTGGGAACACGTAAACGGACGCATTTAGCCTCAAATCTTGCGGAATTCCTTAATCAACTTAAGCCTCTTCTGTAA", + "dna_sequence_length": 546, + "functions": [ + "SecY-interacting protein" + ], + "id": "CDS_2756", + "location": [ + [ + "NC_000913", + 2925280, + "-", + 546 + ] + ], + "md5": "0979a5467964bf33ba7440194dea5101", + "parent_gene": "", + "protein_md5": "9cff58743dde3d94c2d2d8339a396a74", + "protein_translation": "MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPLL", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009162" + ], + [ + "gene_synonym", + "ECK2789" + ], + [ + "gene_synonym", + "EcoGene:EG13173" + ], + [ + "gene_synonym", + "GI:16130701" + ], + [ + "gene_synonym", + "GeneID:947270" + ], + [ + "gene_synonym", + "JW2765" + ], + [ + "gene_synonym", + "NP_417274.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46920" + ], + [ + "gene_synonym", + "b2794" + ], + [ + "gene_synonym", + "queF" + ], + [ + "gene_synonym", + "yqcD" + ] + ], + "dna_sequence": "ATGTCTTCTTATGCAAACCATCAGGCACTTGCGGGCCTGACTCTTGGAAAATCAACCGATTACCGGGATACCTATGACGCCAGCCTACTGCAAGGCGTTCCACGCAGCCTGAATCGCGACCCGCTGGGTCTGAAAGCGGATAACCTGCCTTTTCACGGTACGGATATCTGGACGCTGTATGAACTTTCCTGGCTGAATGCGAAAGGTTTGCCGCAGGTCGCTGTCGGTCATGTTGAACTTGATTACACCAGCGTAAATCTGATTGAGTCGAAGAGTTTTAAGCTCTATCTCAACAGTTTTAACCAGACGCGTTTTAATAACTGGGATGAGGTGCGCCAGACGCTGGAGCGCGACTTAAGCACTTGCGCTCAGGGTAAGATTAGCGTGGCGTTATATCGTCTTGATGAACTGGAAGGCCAGCCGATAGGTCATTTTAATGGCACTTGCATTGATGACCAGGATATCACTATCGATAACTATGAATTCACTACTGACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAA", + "dna_sequence_length": 849, + "functions": [ + "7-cyano-7-deazaguanine reductase (NADPH-dependent)" + ], + "id": "CDS_2757", + "location": [ + [ + "NC_000913", + 2925348, + "+", + 849 + ] + ], + "md5": "8af2118ef70de288afb963390e697b44", + "parent_gene": "", + "protein_md5": "cf65055c716179c3f78d4b45990f394a", + "protein_translation": "MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSLQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009166" + ], + [ + "gene_synonym", + "ECK2790" + ], + [ + "gene_synonym", + "EcoGene:EG12373" + ], + [ + "gene_synonym", + "GI:16130702" + ], + [ + "gene_synonym", + "GeneID:947266" + ], + [ + "gene_synonym", + "JW2766" + ], + [ + "gene_synonym", + "NP_417275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADR8" + ], + [ + "gene_synonym", + "b2795" + ], + [ + "gene_synonym", + "ygdH" + ] + ], + "dna_sequence": "TTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAATATGGTGGTCTGCTGGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAACCCGGCCAACAAAGATCAGGTTTTACCATTGATCCTCACCGGCCCGAAAGAGAGCGCCGACTACTTCCGCGTACTGGACGAGTTTGTCGTGCATACGCTGGGTGAAAACGCGCGCCGCCATTACCGCATCATCATTGATGACGCCGCTGAAGTCGCTCGTCAGATGAAAAAATCGATGCCGCTGGTGAAAGAAAATCGCCGTGATACAGGCGATGCCTACAGCTTTAACTGGTCAATGCGCATTGCGCCAGATTTGCAAATGCCGTTTGAGCCGTCTCACGAGAATATGGCTAATCTGAAGCTTTACCCGGATCAACCTGTTGAAGTGCTGGCTGCCGACCTGCGCCGTGCGTTCTCCGGTATTGTGGCGGGTAACGTAAAAGAAGTCGGTATTCGCGCCATTGAAGAGTTTGGTCCTTACAAAATCAACGGCGATAAAGAGATTATGCGTCGTATGGACGACCTGCTACAGGGTTTTGTTGCCCAGCATCGTATGAAGTTGCCAGGCTCAGCCTACATCCCTTGCTACGAAATCTGCACGTAA", + "dna_sequence_length": 1365, + "functions": [ + "UPF0717 family protein" + ], + "id": "CDS_2758", + "location": [ + [ + "NC_000913", + 2926308, + "+", + 1365 + ] + ], + "md5": "5c957b4336213b547f501a12af77d554", + "parent_gene": "", + "protein_md5": "f183e4346f36c39bd348de3d83e5b7f8", + "protein_translation": "MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009169" + ], + [ + "gene_synonym", + "ECK2791" + ], + [ + "gene_synonym", + "EcoGene:EG12142" + ], + [ + "gene_synonym", + "GI:16130703" + ], + [ + "gene_synonym", + "GeneID:947264" + ], + [ + "gene_synonym", + "JW2767" + ], + [ + "gene_synonym", + "NP_417276.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAD6" + ], + [ + "gene_synonym", + "b2796" + ], + [ + "gene_synonym", + "dcrA" + ], + [ + "gene_synonym", + "sdaC" + ] + ], + "dna_sequence": "ATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTCGTACTGTCTGGTAAAAACCCGGGCGAAGACATCACCGAGGTTGTAGAAGAACACTTTGGTATTGGCGCAGGTAAACTGATTACCCTGCTCTACTTCTTCGCTATCTACCCGATCCTGCTGGTTTATAGCGTGGCAATCACCAATACCGTTGAAAGCTTCATGTCTCACCAGCTGGGTATGACGCCACCGCCGCGTGCGATTCTGTCGCTGATCCTGATCGTGGGTATGATGACCATCGTTCGCTTCGGTGAGCAGATGATCGTTAAAGCGATGAGTATTCTGGTATTCCCGTTTGTTGGCGTACTGATGCTGCTGGCTCTGTACCTGATCCCGCAGTGGAACGGCGCTGCACTGGAAACGCTGTCTCTGGACACTGCATCTGCAACCGGAAACGGTCTGTGGATGACCCTGTGGCTGGCAATTCCGGTAATGGTGTTCTCGTTCAACCACTCTCCGATCATCTCTTCTTTCGCCGTTGCGAAGCGTGAAGAGTACGGCGATATGGCAGAACAGAAATGCTCGAAGATCCTGGCATTCGCACACATCATGATGGTGCTGACCGTAATGTTCTTCGTCTTCAGCTGTGTACTGAGCCTGACTCCGGCAGACCTGGCTGCGGCTAAAGAGCAGAACATCTCGATTCTGTCTTACCTGGCTAACCACTTTAACGCACCGGTTATCGCGTGGATGGCTCCGATTATCGCGATTATCGCTATCACCAAATCCTTCCTCGGTCACTACCTGGGCGCACGTGAAGGCTTCAACGGTATGGTGATTAAATCTCTGCGTGGTAAAGGTAAGTCTATCGAAATCAACAAGCTGAACCGTATCACTGCGCTGTTCATGCTGGTAACGACCTGGATTGTTGCCACCCTGAACCCGAGCATCCTGGGTATGATTGAAACCCTGGGCGGTCCAATCATCGCGATGATCCTGTTCCTGATGCCGATGTACGCAATTCAGAAAGTACCGGCAATGCGTAAGTACAGCGGTCACATCAGCAACGTATTCGTTGTCGTGATGGGTCTGATTGCAATCTCCGCAATCTTCTACTCTCTGTTCAGCTAA", + "dna_sequence_length": 1290, + "functions": [ + "putative serine transporter" + ], + "id": "CDS_2759", + "location": [ + [ + "NC_000913", + 2928229, + "+", + 1290 + ] + ], + "md5": "a28d3fc3d61322f008c6c80c1a56e7d2", + "parent_gene": "", + "protein_md5": "a2d33d253e6e9539162415e9d2feb4b5", + "protein_translation": "METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009172" + ], + [ + "gene_synonym", + "ECK2792" + ], + [ + "gene_synonym", + "EcoGene:EG11623" + ], + [ + "gene_synonym", + "GI:16130704" + ], + [ + "gene_synonym", + "GeneID:947262" + ], + [ + "gene_synonym", + "JW2768" + ], + [ + "gene_synonym", + "NP_417277.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30744" + ], + [ + "gene_synonym", + "b2797" + ], + [ + "gene_synonym", + "sdaB" + ] + ], + "dna_sequence": "ATGATTAGCGTATTCGATATTTTCAAAATCGGCATTGGCCCTTCCAGTTCTCATACCGTTGGACCAATGAAAGCGGGTAAACAATTTACCGACGATCTGATTGCCCGTAACCTGCTTAAAGACGTGACCCGCGTGGTGGTTGACGTGTACGGCTCGCTCTCTCTGACCGGTAAAGGCCACCACACTGATATCGCCATTATTATGGGCCTGGCGGGTAACCTGCCGGATACCGTGGATATCGATTCCATCCCCAGTTTTATTCAGGATGTGAATACTCATGGTCGCCTGATGCTGGCAAACGGTCAGCATGAAGTGGAGTTCCCGGTTGATCAGTGCATGAACTTCCACGCCGACAACCTTTCTCTGCATGAAAACGGTATGCGCATTACCGCGCTGGCGGGCGATAAAGTCGTTTACAGCCAGACTTACTACTCTATTGGCGGTGGCTTTATCGTTGATGAAGAGCATTTTGGCCAGCAGGATAGCGCACCGGTTGAAGTTCCTTATCCGTACAGTTCAGCAGCCGATCTGCAAAAACATTGTCAGGAAACCGGGCTGTCACTCTCTGGCCTGATGATGAAAAACGAGCTGGCGCTGCACAGCAAAGAAGAGCTGGAACAGCACCTGGCGAACGTCTGGGAAGTCATGCGCGGCGGTATTGAGCGCGGTATTTCCACCGAAGGCGTGTTGCCTGGCAAACTGCGCGTTCCACGCCGTGCTGCGGCACTACGCCGGATGCTGGTCAGCCAGGATAAAACCACCACTGACCCGATGGCGGTTGTTGACTGGATCAACATGTTTGCACTGGCAGTGAACGAAGAGAACGCTGCTGGCGGTCGCGTGGTGACTGCGCCGACTAACGGTGCGTGCGGGATTATCCCGGCAGTTCTGGCGTACTACGACAAGTTTATCCGCGAAGTGAACGCTAACTCACTGGCTCGTTACCTGCTGGTAGCCAGCGCCATTGGTTCTCTTTATAAGATGAACGCGTCGATTTCTGGTGCTGAAGTGGGTTGCCAGGGTGAAGTTGGCGTGGCGTGCTCAATGGCGGCGGCTGGTCTGGCAGAACTATTAGGCGCAAGCCCGGCGCAGGTGTGCATCGCGGCGGAAATCGCCATGGAGCACAACCTCGGTCTGACGTGTGACCCGGTCGCCGGACAGGTACAGGTGCCATGCATCGAGCGTAACGCCATTGCGGCAGTAAAAGCGGTGAACGCCGCACGTATGGCGCTGCGCCGTACCAGCGAGCCGCGCGTCTGCCTCGATAAAGTTATCGAAACCATGTACGAAACAGGTAAAGATATGAACGCCAAGTACCGCGAAACCTCTCGCGGCGGCCTGGCAATGAAGATCGTTGCCTGCGATTAA", + "dna_sequence_length": 1368, + "functions": [ + "L-serine dehydratase 2" + ], + "id": "CDS_2760", + "location": [ + [ + "NC_000913", + 2929576, + "+", + 1368 + ] + ], + "md5": "2f2624fd467f0c1141e1bef022321648", + "parent_gene": "", + "protein_md5": "43a98c026719d6e195371b7693d4d122", + "protein_translation": "MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPSFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQDSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD", + "protein_translation_length": 455, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009174" + ], + [ + "gene_synonym", + "ECK2793" + ], + [ + "gene_synonym", + "EcoGene:EG12372" + ], + [ + "gene_synonym", + "GI:226524743" + ], + [ + "gene_synonym", + "GeneID:947256" + ], + [ + "gene_synonym", + "JW5446" + ], + [ + "gene_synonym", + "NP_417278.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38506" + ], + [ + "gene_synonym", + "b2798" + ], + [ + "gene_synonym", + "exo" + ], + [ + "gene_synonym", + "xni" + ], + [ + "gene_synonym", + "ygdG" + ] + ], + "dna_sequence": "GTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCTGCCAGCATGCGCTCGATCAGCTCATTATGCACAGCCAGCCAACCCACGCGGTCGCCGTTTTTGATGATGAAAACCGCAGTAGCGGCTGGCGTCATCAGCGTTTACCAGATTACAAAGCGGGTCGACCGCCAATGCCGGAAGAGTTGCACGACGAGATGCCTGCATTACGCGCCGCCTTTGAGCAACGCGGCGTCCCGTGCTGGTCAACCAGCGGCAACGAAGCCGATGACTTAGCCGCCACGCTGGCGGTCAAAGTGACACAGGCCGGGCATCAGGCAACGATTGTTTCGACAGATAAAGGCTACTGTCAGTTACTTTCACCGACATTACGTATTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTGGGGACTTGCGGGGATCAGCAGTTCAAAGGTACCGGGTGTTGCGGGAATCGGACCAAAAAGCGCCACGCAGCTGCTGGTCGAGTTTCAGAGTCTGGAAGGGATATATGAGAATCTGGATGCGGTTGCCGAAAAGTGGCGCAAAAAATTAGAAACCCATAAAGAGATGGCGTTTCTGTGCCGCGATATTGCCCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAA", + "dna_sequence_length": 756, + "functions": [ + "Ssb-binding protein, misidentified as ExoIX" + ], + "id": "CDS_2761", + "location": [ + [ + "NC_000913", + 2931055, + "+", + 756 + ] + ], + "md5": "860d8d6f709a8fc397a0b82581073ad8", + "parent_gene": "", + "protein_md5": "3f479355229956f0652aaf852d1f780d", + "protein_translation": "MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009177" + ], + [ + "gene_synonym", + "ECK2794" + ], + [ + "gene_synonym", + "EcoGene:EG10351" + ], + [ + "gene_synonym", + "GI:345452723" + ], + [ + "gene_synonym", + "GeneID:947273" + ], + [ + "gene_synonym", + "JW2770" + ], + [ + "gene_synonym", + "NP_417279.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S1" + ], + [ + "gene_synonym", + "b2799" + ], + [ + "gene_synonym", + "fucO" + ] + ], + "dna_sequence": "ATGGCTAACAGAATGATTCTGAACGAAACGGCATGGTTTGGTCGGGGTGCTGTTGGGGCTTTAACCGATGAGGTGAAACGCCGTGGTTATCAGAAGGCGCTGATCGTCACCGATAAAACGCTGGTGCAATGCGGCGTGGTGGCGAAAGTGACCGATAAGATGGATGCTGCAGGGCTGGCATGGGCGATTTACGACGGCGTAGTGCCCAACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTATTGGTGGTGGTTCTCCACAGGATACTTGTAAAGCGATTGGCATTATCAGCAACAACCCGGAGTTTGCCGATGTGCGTAGCCTGGAAGGGCTTTCCCCGACCAATAAACCCAGTGTACCGATTCTGGCAATTCCTACCACAGCAGGTACTGCGGCAGAAGTGACCATTAACTACGTGATCACTGACGAAGAGAAACGGCGCAAGTTTGTTTGCGTTGATCCGCATGATATCCCGCAGGTGGCGTTTATTGACGCTGACATGATGGATGGTATGCCTCCAGCGCTGAAAGCTGCGACGGGTGTCGATGCGCTCACTCATGCTATTGAGGGGTATATTACCCGTGGCGCGTGGGCGCTAACCGATGCACTGCACATTAAAGCGATTGAAATCATTGCTGGGGCGCTGCGAGGATCGGTTGCTGGTGATAAGGATGCCGGAGAAGAAATGGCGCTCGGGCAGTATGTTGCGGGTATGGGCTTCTCGAATGTTGGGTTAGGGTTGGTGCATGGTATGGCGCATCCACTGGGCGCGTTTTATAACACTCCACACGGTGTTGCGAACGCCATCCTGTTACCGCATGTCATGCGTTATAACGCTGACTTTACCGGTGAGAAGTACCGCGATATCGCGCGCGTTATGGGCGTGAAAGTGGAAGGTATGAGCCTGGAAGAGGCGCGTAATGCCGCTGTTGAAGCGGTGTTTGCTCTCAACCGTGATGTCGGTATTCCGCCACATTTGCGTGATGTTGGTGTACGCAAGGAAGACATTCCGGCACTGGCGCAGGCGGCACTGGATGATGTTTGTACCGGTGGCAACCCGCGTGAAGCAACGCTTGAGGATATTGTAGAGCTTTACCATACCGCCTGGTAA", + "dna_sequence_length": 1149, + "functions": [ + "L-1,2-propanediol oxidoreductase" + ], + "id": "CDS_2762", + "location": [ + [ + "NC_000913", + 2933013, + "-", + 1149 + ] + ], + "md5": "c0a89588cc3574ad5392411bc128ee38", + "parent_gene": "", + "protein_md5": "a7952e210195e398156a0d5896aa0437", + "protein_translation": "MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009179" + ], + [ + "gene_synonym", + "ECK2795" + ], + [ + "gene_synonym", + "EcoGene:EG10348" + ], + [ + "gene_synonym", + "GI:16130707" + ], + [ + "gene_synonym", + "GeneID:947282" + ], + [ + "gene_synonym", + "JW2771" + ], + [ + "gene_synonym", + "NP_417280.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB87" + ], + [ + "gene_synonym", + "b2800" + ], + [ + "gene_synonym", + "fucA" + ], + [ + "gene_synonym", + "fucC" + ], + [ + "gene_synonym", + "prd" + ] + ], + "dna_sequence": "ATGGAACGAAATAAACTTGCTCGTCAGATTATTGACACTTGCCTGGAAATGACCCGCCTGGGACTGAACCAGGGGACAGCGGGGAACGTCAGTGTACGTTATCAGGATGGGATGCTGATTACGCCTACAGGCATTCCATATGAAAAACTGACGGAGTCGCATATTGTCTTTATTGATGGCAACGGTAAACATGAGGAAGGAAAGCTCCCCTCAAGCGAATGGCGTTTCCATATGGCAGCCTATCAAAGCAGACCGGATGCCAACGCGGTTGTTCACAATCATGCCGTTCATTGCACGGCAGTTTCCATTCTTAACCGATCGATCCCCGCTATTCACTACATGATTGCGGCGGCTGGCGGTAATTCTATTCCTTGCGCGCCTTATGCGACCTTTGGAACACGCGAACTTTCTGAACATGTTGCGCTGGCTCTCAAAAATCGTAAGGCAACTTTGTTACAACATCATGGGCTTATCGCTTGTGAGGTGAATCTGGAAAAAGCGTTATGGCTGGCGCATGAAGTTGAAGTGCTGGCGCAACTTTACCTGACGACCCTGGCGATTACGGACCCGGTGCCAGTGCTGAGCGATGAAGAGATTGCCGTAGTGCTGGAGAAATTCAAAACCTATGGGTTACGAATTGAAGAGTAA", + "dna_sequence_length": 648, + "functions": [ + "L-fuculose-1-phosphate aldolase" + ], + "id": "CDS_2763", + "location": [ + [ + "NC_000913", + 2933688, + "-", + 648 + ] + ], + "md5": "7dc22f68a2983c06168cc00503049319", + "parent_gene": "", + "protein_md5": "3dbf2e28e039acdb27aba57a7e14a764", + "protein_translation": "MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009187" + ], + [ + "gene_synonym", + "ECK2796" + ], + [ + "gene_synonym", + "EcoGene:EG10352" + ], + [ + "gene_synonym", + "GI:16130708" + ], + [ + "gene_synonym", + "GeneID:947487" + ], + [ + "gene_synonym", + "JW2772" + ], + [ + "gene_synonym", + "NP_417281.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11551" + ], + [ + "gene_synonym", + "b2801" + ], + [ + "gene_synonym", + "fucP" + ] + ], + "dna_sequence": "ATGGGAAACACATCAATACAAACGCAGAGTTACCGTGCGGTAGATAAAGATGCAGGGCAAAGCAGAAGTTACATTATTCCATTCGCGCTGCTGTGCTCACTGTTTTTTCTTTGGGCGGTAGCCAATAACCTTAACGACATTTTATTACCTCAATTCCAGCAGGCTTTTACGCTGACAAATTTCCAGGCTGGCCTGATCCAATCGGCCTTTTACTTTGGTTATTTCATTATCCCAATCCCTGCTGGGATATTGATGAAAAAACTCAGTTATAAAGCAGGGATTATTACCGGGTTATTTTTATATGCCTTGGGTGCTGCATTATTCTGGCCCGCCGCAGAAATAATGAACTACACCTTGTTTTTAGTTGGCCTATTTATTATTGCAGCCGGATTAGGTTGTCTGGAAACTGCCGCAAACCCTTTTGTTACGGTATTAGGGCCGGAAAGTAGTGGTCACTTCCGCTTAAATCTTGCGCAAACATTTAACTCGTTTGGCGCAATTATCGCGGTTGTCTTTGGGCAAAGTCTTATTTTGTCTAACGTGCCACATCAATCGCAAGACGTTCTCGATAAAATGTCTCCAGAGCAATTGAGTGCGTATAAACACAGCCTGGTATTATCGGTACAGACACCTTATATGATCATCGTGGCTATCGTGTTACTGGTCGCCCTGCTGATCATGCTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGTATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCTGTAGAAGAAATTCCAGGTATGACTGCAGGCTTTGCCGCTAACTATTTAACCGGAACCATGGTGTGCTTCTTTATTGGTCGTTTCACCGGTACCTGGCTCATCAGTCGCTTCGCACCACACAAAGTCCTGGCCGCCTACGCATTAATCGCTATGGCACTGTGCCTGATCTCAGCCTTCGCTGGCGGTCATGTGGGCTTAATAGCCCTGACTTTATGCAGCGCCTTTATGTCGATTCAGTACCCAACAATCTTCTCGCTGGGCATTAAGAATCTCGGCCAGGACACCAAATATGGTTCGTCCTTCATCGTTATGACCATTATTGGCGGCGGTATTGTCACTCCGGTCATGGGTTTTGTCAGTGACGCGGCGGGCAACATCCCCACTGCTGAACTGATCCCCGCACTCTGCTTCGCGGTCATCTTTATCTTTGCCCGTTTCCGTTCTCAAACGGCAACTAACTGA", + "dna_sequence_length": 1317, + "functions": [ + "L-fucose transporter" + ], + "id": "CDS_2764", + "location": [ + [ + "NC_000913", + 2934235, + "+", + 1317 + ] + ], + "md5": "dc8df13d0c7d12ae06040d788b3f4e4f", + "parent_gene": "", + "protein_md5": "0530c5e9c40db1a656c982bb16deb794", + "protein_translation": "MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN", + "protein_translation_length": 438, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009189" + ], + [ + "gene_synonym", + "ECK2797" + ], + [ + "gene_synonym", + "EcoGene:EG10349" + ], + [ + "gene_synonym", + "GI:16130709" + ], + [ + "gene_synonym", + "GeneID:946195" + ], + [ + "gene_synonym", + "JW2773" + ], + [ + "gene_synonym", + "NP_417282.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69922" + ], + [ + "gene_synonym", + "b2802" + ], + [ + "gene_synonym", + "fucI" + ] + ], + "dna_sequence": "ATGAAAAAAATCAGCTTACCGAAAATTGGTATCCGCCCGGTTATTGACGGTCGTCGCATGGGTGTTCGTGAGTCGCTTGAAGAACAAACAATGAATATGGCGAAAGCTACGGCCGCACTGCTGACCGAGAAACTGCGCCATGCCTGCGGAGCTGCCGTCGAGTGTGTCATTTCCGATACCTGTATCGCGGGTATGGCTGAAGCCGCTGCTTGCGAAGAAAAATTCAGCAGTCAGAATGTAGGCCTCACCATTACGGTAACGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCCGAAGGCCATTTGGGGCTTTAACGGCACTGAACGCCCCGGCGCTGTTTACCTGGCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGATGCCGATGACACATCGATTCCTGCCGATGTTGAAGAAAAACTGCTGCGCTTTGCCCGCGCCGGTTTGGCCGTCGCCAGCATGAAAGGTAAAAGCTATCTGTCGCTGGGCGGCGTTTCGATGGGTATCGCCGGTTCCATTGTTGATCACAACTTCTTTGAATCCTGGCTGGGAATGAAAGTCCAGGCGGTGGATATGACCGAACTGCGTCGCCGTATCGATCAGAAGATTTACGACGAAGCCGAATTGGAAATGGCACTGGCCTGGGCTGATAAAAACTTCCGCTATGGCGAAGATGAAAATAACAAACAGTATCAACGTAATGCCGAGCAAAGCCGCGCAGTTCTGCGCGAAAGTTTACTGATGGCGATGTGTATCCGCGACATGATGCAAGGCAACAGCAAACTGGCCGATATTGGTCGCGTGGAAGAATCACTTGGCTACAACGCCATCGCTGCGGGCTTCCAGGGGCAACGTCACTGGACCGATCAATATCCCAATGGTGACACCGCCGAAGCGATCCTCAACAGTTCATTTGACTGGAATGGCGTGCGCGAACCCTTTGTCGTGGCGACCGAAAACGACAGTCTTAACGGCGTGGCAATGCTAATGGGTCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGTTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGAATACTTCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATGACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTGGCGCAGACTTTATCACTCTCGCCTCCATGCTGCGTATCCCGGTATGTATGCACAACGTTGAAGAGACCAAAGTGTATCGTCCTTCTGCCTGGGCTGCGCACGGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAA", + "dna_sequence_length": 1776, + "functions": [ + "L-fucose isomerase" + ], + "id": "CDS_2765", + "location": [ + [ + "NC_000913", + 2935584, + "+", + 1776 + ] + ], + "md5": "b23e5f6a2ca90c748fa6e77a3c472396", + "parent_gene": "", + "protein_md5": "8be48c0b4f5abcc4f987fbefabcff969", + "protein_translation": "MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR", + "protein_translation_length": 591, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009191" + ], + [ + "gene_synonym", + "ECK2798" + ], + [ + "gene_synonym", + "EcoGene:EG10350" + ], + [ + "gene_synonym", + "GI:674842733" + ], + [ + "gene_synonym", + "GeneID:946022" + ], + [ + "gene_synonym", + "JW2774" + ], + [ + "gene_synonym", + "NP_417283.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11553" + ], + [ + "gene_synonym", + "b2803" + ], + [ + "gene_synonym", + "fucK" + ] + ], + "dna_sequence": "ATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGGCCATCGCGGTTAATCGGCAGGGCAAAATTGTTGCCCGCGCCTCAACGCCTAATGCCAGCGATATCGCGATGGAAAACAACACCTGGCACCAGTGGTCTTTAGACGCCATTTTGCAACGCTTTGCTGATTGCTGTCGGCAAATCAATAGTGAACTGACTGAATGCCACATCCGCGGTATCGCCGTCACCACCTTTGGTGTGGATGGCGCTCTGGTAGATAAGCAAGGCAATCTGCTCTATCCGATTATTAGCTGGAAATGTCCGCGAACAGCAGCGGTTATGGACAATATTGAACGGTTAATCTCCGCACAGCGGTTGCAGGCTATTTCTGGCGTCGGAGCCTTTAGTTTCAATACGTTATATAAGTTGGTGTGGTTGAAAGAAAATCATCCACAACTGCTGGAACGCGCGCACGCCTGGCTCTTTATTTCGTCGCTGATTAACCACCGTTTAACCGGCGAATTCACTACTGATATCACGATGGCCGGAACCAGCCAGATGCTGGATATCCAGCAACGCGATTTCAGTCCGCAAATTTTACAAGCCACCGGTATTCCACGCCGACTCTTCCCTCGTCTGGTGGAAGCGGGTGAACAGATTGGTACGCTACAGAACAGCGCCGCAGCAATGCTCGGCTTACCCGTTGGCATACCGGTGATTTCCGCAGGTCACGATACCCAGTTCGCCCTTTTTGGCGCTGGTGCTGAACAAAATGAACCCGTGCTCTCTTCCGGTACATGGGAAATTTTAATGGTTCGCAGCGCCCAGGTTGATACTTCGCTGTTAAGTCAGTACGCCGGTTCCACCTGCGAACTGGATAGCCAGGCAGGGTTGTATAACCCAGGTATGCAATGGCTGGCATCCGGCGTGCTGGAATGGGTGAGAAAACTGTTCTGGACGGCTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGCAATCTACAGATGCTGGAAAAAATCGGGCACTTTAAGGCCTCTGAATTATTGTTAGTCGGTGGAGGAAGTCGCAACACATTGTGGAATCAGATTAAAGCCAATATGCTTGATATTCCGGTAAAAGTTCTCGACGACGCCGAAACGACCGTCGCAGGAGCTGCGCTGTTCGGTTGGTATGGCGTAGGGGAATTTAACAGCCCGGAAGAAGCCCGCGCACAGATTCATTATCAGTACCGTTATTTCTACCCGCAAACTGAACCTGAATTTATAGAGGAAGTGTGA", + "dna_sequence_length": 1419, + "functions": [ + "L-fuculokinase" + ], + "id": "CDS_2766", + "location": [ + [ + "NC_000913", + 2937468, + "+", + 1419 + ] + ], + "md5": "e7f7ae5a69e778cbecde98b8d57c8d90", + "parent_gene": "", + "protein_md5": "c90262ca07247f04717e05ada7f0b306", + "protein_translation": "MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISWKCPRTAAVMDNIERLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGAEQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKASELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEARAQIHYQYRYFYPQTEPEFIEEV", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009193" + ], + [ + "gene_synonym", + "ECK2799" + ], + [ + "gene_synonym", + "EcoGene:EG10355" + ], + [ + "gene_synonym", + "GI:16130711" + ], + [ + "gene_synonym", + "GeneID:945842" + ], + [ + "gene_synonym", + "JW2775" + ], + [ + "gene_synonym", + "NP_417284.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEN8" + ], + [ + "gene_synonym", + "b2804" + ], + [ + "gene_synonym", + "fucU" + ] + ], + "dna_sequence": "ATGCTGAAAACAATTTCGCCGTTAATTTCTCCCGAACTATTGAAAGTGCTGGCAGAGATGGGACATGGAGATGAAATTATTTTTTCCGATGCTCACTTTCCCGCCCATTCGATGGGACCGCAGGTGATCCGCGCTGATGGCCTGTTGGTGAGCGACTTGCTCCAGGCGATTATCCCGTTATTTGAACTGGACAGTTATGCACCGCCGCTGGTGATGATGGCGGCGGTAGAAGGTGACACTCTCGATCCTGAAGTAGAACGACGTTACCGTAATGCGCTTTCACTACAAGCCCCGTGTCCTGACATCATCCGCATCAATCGTTTTGCGTTTTATGAACGGGCGCAAAAAGCCTTTGCGATCGTTATCACAGGCGAACGAGCGAAGTACGGGAATATTCTTTTAAAAAAAGGGGTAACACCGTAA", + "dna_sequence_length": 423, + "functions": [ + "L-fucose mutarotase" + ], + "id": "CDS_2767", + "location": [ + [ + "NC_000913", + 2938888, + "+", + 423 + ] + ], + "md5": "2ca36b6e861754c32648c7f66c9e54d0", + "parent_gene": "", + "protein_md5": "05793d33afddf98c3a809ef19fa95319", + "protein_translation": "MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009195" + ], + [ + "gene_synonym", + "ECK2800" + ], + [ + "gene_synonym", + "EcoGene:EG10353" + ], + [ + "gene_synonym", + "GI:16130712" + ], + [ + "gene_synonym", + "GeneID:946905" + ], + [ + "gene_synonym", + "JW2776" + ], + [ + "gene_synonym", + "NP_417285.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACK8" + ], + [ + "gene_synonym", + "b2805" + ], + [ + "gene_synonym", + "fucR" + ] + ], + "dna_sequence": "ATGAAAGCGGCACGCCAGCAAGCGATAGTCGACCTGCTGCTGAACCATACCAGCCTGACCACGGAAGCTCTCTCTGAACAGCTAAAGGTCAGTAAAGAAACCATTCGTCGCGATCTCAATGAATTACAGACGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGAACGCATTCAACTGATCAGTTCCGGCGGCACACTTGAGCGCAAATATGGCTGTTACGTCAATCCCTCGCTGATTTCCCAACTTAAATCGCTGGAAATCGATCTGTTTATTTTTTCTTGTGAAGGGATCGATAGCAGCGGCGCACTGTGGGACTCCAATGCGATCAACGCTGATTACAAATCGATGCTATTAAAACGTGCCGCGCAATCGTTGTTATTGATTGATAAAAGTAAATTTAATCGTTCAGGGGAAGCCCGCATCGGGCATCTGGATGAGGTAACGCACATTATTTCTGATGAGCGCCAGGTTGCAACTTCTTTGGTAACAGCCTGA", + "dna_sequence_length": 732, + "functions": [ + "l-fucose operon activator" + ], + "id": "CDS_2768", + "location": [ + [ + "NC_000913", + 2939368, + "+", + 732 + ] + ], + "md5": "7218a623cf3b877de1b8965aec625f4a", + "parent_gene": "", + "protein_md5": "1c22e9428d5342ff7ce99f6d8c9c5ee3", + "protein_translation": "MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVATSLVTA", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009197" + ], + [ + "gene_synonym", + "ECK2801" + ], + [ + "gene_synonym", + "EcoGene:EG11794" + ], + [ + "gene_synonym", + "GI:16130713" + ], + [ + "gene_synonym", + "GeneID:947283" + ], + [ + "gene_synonym", + "JW2777" + ], + [ + "gene_synonym", + "NP_417286.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADR6" + ], + [ + "gene_synonym", + "b2806" + ], + [ + "gene_synonym", + "rlmM" + ], + [ + "gene_synonym", + "ygdE" + ] + ], + "dna_sequence": "ATGAATAAGGTTGTATTGCTGTGCCGTCCGGGCTTTGAAAAAGAGTGCGCCGCAGAAATTACCGATAAAGCCGGCCAGCGGGAAATTTTCGGTTTTGCCCGCGTGAAAGAGAATGCGGGTTATGTCATTTATGAATGTTATCAACCTGATGATGGCGATAAGTTAATCCGTGAGCTGCCGTTCAGTTCATTAATTTTTGCCCGCCAGTGGTTTGTGGTGGGGGAACTCCTGCAGCATTTGCCGCCAGAAGATCGTATTACCCCCATTGTCGGCATGTTACAGGGCGTAGTAGAGAAGGGCGGTGAACTGCGTGTTGAAGTTGCCGATACCAACGAAAGCAAAGAGTTACTGAAATTCTGCCGTAAATTTACTGTTCCGCTACGCGCTGCCTTGCGCGATGCCGGGGTGCTGGCGAACTATGAAACGCCGAAGCGTCCGGTTGTGCATGTATTCTTTATTGCACCAGGCTGCTGCTATACCGGTTACTCATACAGCAACAATAATTCGCCGTTCTATATGGGCATTCCGCGCCTGAAATTTCCGGCAGATGCGCCGAGTCGTTCCACGCTCAAACTGGAAGAGGCATTTCATGTGTTTATTCCTGCGGATGAGTGGGATGAACGCCTGGCGAACGGGATGTGGGCGGTGGATTTAGGCGCTTGCCCTGGCGGCTGGACCTACCAACTGGTGAAGCGCAACATGTGGGTTTATTCCGTCGACAACGGCCCGATGGCGCAAAGTCTGATGGATACCGGACAGGTGACGTGGCTGCGGGAAGACGGTTTCAAATTCCGTCCGACGCGCAGCAATATCTCCTGGATGGTATGCGATATGGTTGAAAAACCGGCGAAAGTTGCGGCATTGATGGCGCAGTGGCTGGTTAATGGCTGGTGCCGTGAAACCATTTTCAACCTCAAACTGCCGATGAAAAAACGCTACGAAGAAGTGTCACACAATCTGGCGTATATTCAGGCACAGCTTGATGAACATGGCATAAATGCTCAGATTCAGGCGCGGCAGTTGTATCACGATCGCGAAGAAGTGACGGTGCACGTCCGCCGCATCTGGGCTGCGGTGGGTGGTCGTCGCGACGAGCGATAA", + "dna_sequence_length": 1101, + "functions": [ + "23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent" + ], + "id": "CDS_2769", + "location": [ + [ + "NC_000913", + 2941243, + "-", + 1101 + ] + ], + "md5": "5fec65528fdbbe08eaf3460d668373d0", + "parent_gene": "", + "protein_md5": "cf263bc6440a4d61df51f2a700d06fc6", + "protein_translation": "MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVGGRRDER", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009199" + ], + [ + "gene_synonym", + "ECK2802" + ], + [ + "gene_synonym", + "EcoGene:EG11793" + ], + [ + "gene_synonym", + "GI:16130714" + ], + [ + "gene_synonym", + "GeneID:947279" + ], + [ + "gene_synonym", + "JW2778" + ], + [ + "gene_synonym", + "NP_417287.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADR2" + ], + [ + "gene_synonym", + "b2807" + ], + [ + "gene_synonym", + "ygdD" + ] + ], + "dna_sequence": "ATGACCAGCCGTTTTATGCTGATTTTCGCCGCCATTAGCGGCTTCATTTTTGTGGCTCTGGGCGCTTTTGGCGCGCATGTGTTAAGTAAAACCATGGGGGCCGTTGAGATGGGCTGGATCCAGACCGGCCTCGAATACCAGGCGTTTCATACGCTGGCGATCTTAGGTCTGGCGGTGGCAATGCAGCGTCGCATCAGTATCTGGTTTTACTGGAGTAGCGTTTTCCTCGCGTTAGGCACGGTGTTGTTCAGCGGCAGCCTTTATTGCCTGGCGCTGTCCCATCTGCGTTTGTGGGCGTTTGTCACTCCGGTTGGCGGCGTGAGCTTCCTCGCGGGCTGGGCGTTAATGTTAGTTGGTGCTATCCGTTTAAAGCGCAAGGGCGTAAGTCATGAATAA", + "dna_sequence_length": 396, + "functions": [ + "UPF0382 family inner membrane protein" + ], + "id": "CDS_2770", + "location": [ + [ + "NC_000913", + 2941631, + "-", + 396 + ] + ], + "md5": "3bdc1d9d9852cb816b143d53e356a601", + "parent_gene": "", + "protein_md5": "3dca18030d360a2d65805a168ed98b5d", + "protein_translation": "MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGAIRLKRKGVSHE", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009202" + ], + [ + "gene_synonym", + "ECK2803" + ], + [ + "gene_synonym", + "EcoGene:EG11795" + ], + [ + "gene_synonym", + "GI:16130715" + ], + [ + "gene_synonym", + "GeneID:947278" + ], + [ + "gene_synonym", + "JW2779" + ], + [ + "gene_synonym", + "NP_417288.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9F6" + ], + [ + "gene_synonym", + "b2808" + ], + [ + "gene_synonym", + "gcvA" + ] + ], + "dna_sequence": "ATGTCTAAACGATTACCACCGCTAAATGCCTTACGAGTTTTTGATGCCGCAGCACGCCATTTAAGTTTCACTCGCGCAGCAGAAGAGCTTTTTGTGACCCAAGCCGCAGTAAGTCATCAAATCAAGTCTCTTGAGGATTTTTTGGGGCTAAAACTGTTCCGCCGCCGTAATCGTTCACTCCTGCTGACCGAGGAAGGGCAAAGCTATTTCCTCGATATCAAAGAGATATTTTCGCAATTAACCGAAGCGACGCGTAAACTCCAGGCCCGTAGCGCCAAGGGGGCGTTGACGGTCAGTTTACTCCCCAGTTTCGCCATTCATTGGTTGGTTCCGCGACTTTCCAGCTTTAATTCAGCTTATCCGGGAATTGACGTTCGAATCCAGGCGGTTGATCGTCAGGAAGATAAGCTGGCGGATGATGTTGATGTGGCGATATTTTATGGTCGGGGCAACTGGCCGGGGCTACGGGTGGAAAAACTGTACGCCGAATATTTATTGCCGGTGTGTTCGCCGCTACTGCTGACTGGCGAAAAACCCTTGAAGACACCGGAAGATCTGGCTAAACATACGTTATTACATGATGCTTCGCGCCGTGACTGGCAGACATATACCCGACAGTTGGGGTTAAATCATATCAACGTTCAGCAAGGGCCAATTTTTAGCCATAGCGCCATGGTGCTGCAAGCGGCTATCCACGGGCAGGGAGTGGCGCTGGCAAATAACGTGATGGCGCAATCTGAAATCGAGGCCGGACGTCTTGTTTGCCCGTTTAATGATGTTCTGGTCAGTAAAAATGCTTTTTATCTGGTTTGTCATGACAGTCAGGCAGAACTGGGTAAAATAGCCGCCTTTCGCCAATGGATCCTGGCGAAAGCCGCTGCTGAACAAGAAAAATTCCGCTTTCGTTATGAACAATAA", + "dna_sequence_length": 918, + "functions": [ + "glycine cleavage system transcriptional activator", + "autorepressor" + ], + "id": "CDS_2771", + "location": [ + [ + "NC_000913", + 2942567, + "-", + 918 + ] + ], + "md5": "ed3dafb80234fa2fb20b76875a6e07cf", + "parent_gene": "", + "protein_md5": "b264c05bcf652e64087840e0bcf76319", + "protein_translation": "MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFRFRYEQ", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009214" + ], + [ + "gene_synonym", + "ECK2805" + ], + [ + "gene_synonym", + "EcoGene:EG13081" + ], + [ + "gene_synonym", + "GI:90111491" + ], + [ + "gene_synonym", + "GeneID:947276" + ], + [ + "gene_synonym", + "JW5448" + ], + [ + "gene_synonym", + "NP_417289.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65292" + ], + [ + "gene_synonym", + "b2809" + ], + [ + "gene_synonym", + "ygdI" + ] + ], + "dna_sequence": "ATGAAAAAGACTGCCGCAATTATTTCTGCCTGTATGCTGACTTTTGCCCTGAGCGCCTGTTCCGGTTCGAACTATGTGATGCACACCAATGACGGACGTACCATCGTCTCTGACGGCAAACCACAGACTGATAACGATACCGGTATGATTTCGTATAAAGACGCTAATGGCAACAAACAGCAGATCAACCGTACTGACGTGAAAGAGATGGTCGAACTGGATCAGTAA", + "dna_sequence_length": 228, + "functions": [ + "DUF903 family verified lipoprotein" + ], + "id": "CDS_2772", + "location": [ + [ + "NC_000913", + 2943145, + "-", + 228 + ] + ], + "md5": "e955e564f889cd76e29952ffe6557e66", + "parent_gene": "", + "protein_md5": "bf4b447bd2f3097b62a413fb7083ab2e", + "protein_translation": "MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009218" + ], + [ + "gene_synonym", + "ECK2806" + ], + [ + "gene_synonym", + "EcoGene:EG13082" + ], + [ + "gene_synonym", + "GI:16130717" + ], + [ + "gene_synonym", + "GeneID:947275" + ], + [ + "gene_synonym", + "JW2781" + ], + [ + "gene_synonym", + "NP_417290.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46925" + ], + [ + "gene_synonym", + "b2810" + ], + [ + "gene_synonym", + "csdA" + ], + [ + "gene_synonym", + "ygdJ" + ] + ], + "dna_sequence": "ATGAACGTTTTTAATCCCGCGCAGTTTCGCGCCCAGTTTCCCGCACTACAGGATGCGGGCGTCTATCTCGACAGCGCCGCGACCGCGCTTAAACCTGAAGCCGTGGTTGAAGCCACCCAACAGTTTTACAGTCTGAGCGCCGGAAACGTCCATCGCAGCCAGTTTGCCGAAGCCCAACGCCTGACCGCGCGTTATGAAGCTGCACGAGAGAAAGTGGCGCAATTACTGAATGCACCGGATGATAAAACTATCGTCTGGACGCGCGGCACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGGGGGCAGTGCATTTCCCCGCGGATGTTCAGCAACTGGATATTGATTTCTATGCTTTTTCAGGTCACAAACTGTATGGCCCGACAGGTATCGGCGTGCTGTATGGTAAATCAGAACTGCTGGAGGCGATGTCGCCCTGGCTGGGCGGCGGCAAAATGGTTCACGAAGTGAGTTTTGACGGCTTCACGACTCAATCTGCGCCGTGGAAACTGGAAGCTGGAACGCCAAATGTCGCTGGTGTCATAGGATTAAGCGCGGCGCTGGAATGGCTGGCAGATTACGATATCAACCAGGCCGAAAGCTGGAGCCGTAGCTTAGCAACGCTGGCGGAAGATGCGCTGGCGAAACGTCCCGGCTTTCGTTCATTCCGCTGCCAGGATTCCAGCCTGCTGGCCTTTGATTTTGCTGGCGTTCATCATAGCGATATGGTGACGCTGCTGGCGGAGTACGGTATTGCCCTGCGGGCCGGGCAGCATTGCGCTCAGCCGCTACTGGCAGAATTAGGCGTAACCGGCACACTGCGCGCCTCTTTTGCGCCATATAATACAAAGAGTGATGTGGATGCGCTGGTGAATGCCGTTGACCGCGCGCTGGAATTATTGGTGGATTAA", + "dna_sequence_length": 1206, + "functions": [ + "cysteine sulfinate desulfinase" + ], + "id": "CDS_2773", + "location": [ + [ + "NC_000913", + 2943337, + "+", + 1206 + ] + ], + "md5": "e6c10ca1b9552755a8cf00bcee0bbfa3", + "parent_gene": "", + "protein_md5": "68a6590dd6787ab04719aec0346d0caa", + "protein_translation": "MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALELLVD", + "protein_translation_length": 401, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009220" + ], + [ + "gene_synonym", + "ECK2807" + ], + [ + "gene_synonym", + "EcoGene:EG13083" + ], + [ + "gene_synonym", + "GI:16130718" + ], + [ + "gene_synonym", + "GeneID:947274" + ], + [ + "gene_synonym", + "JW2782" + ], + [ + "gene_synonym", + "NP_417291.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGF2" + ], + [ + "gene_synonym", + "b2811" + ], + [ + "gene_synonym", + "csdE" + ], + [ + "gene_synonym", + "ygdK" + ] + ], + "dna_sequence": "ATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGAAACAGCTTCCGGCATTGCCAGACGAGTTAAAAGCGCAGGCTAAAGAGATTGCCGGATGCGAAAACCGCGTCTGGCTGGGATATACAGTGGCTGAAAACGGCAAAATGCATTTCTTTGGCGACAGCGAAGGGCGCATTGTGCGCGGCCTGCTGGCGGTGTTGTTGACTGCCGTTGAGGGGAAAACCGCCGCCGAGTTGCAGGCACAGTCACCACTGGCATTGTTTGATGAGCTGGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAA", + "dna_sequence_length": 444, + "functions": [ + "CsdA-binding activator", + "Fe-S protein" + ], + "id": "CDS_2774", + "location": [ + [ + "NC_000913", + 2944542, + "+", + 444 + ] + ], + "md5": "57225080affacdd1d532b14d66f2fc5b", + "parent_gene": "", + "protein_md5": "c1e3800a5640820e3df98e8023db8756", + "protein_translation": "MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAATKQV", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009223" + ], + [ + "gene_synonym", + "ECK2808" + ], + [ + "gene_synonym", + "EcoGene:EG13084" + ], + [ + "gene_synonym", + "GI:16130719" + ], + [ + "gene_synonym", + "GeneID:947291" + ], + [ + "gene_synonym", + "JW2783" + ], + [ + "gene_synonym", + "NP_417292.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46927" + ], + [ + "gene_synonym", + "b2812" + ], + [ + "gene_synonym", + "csdL" + ], + [ + "gene_synonym", + "tcdA" + ], + [ + "gene_synonym", + "ygdL" + ] + ], + "dna_sequence": "ATGTCTGTGGTAATTAGTGATGCATGGCGTCAGCGTTTTGGTGGCACAGCGCGTCTGTATGGTGAAAAAGCGTTGCAACTGTTTGCTGACGCGCATATTTGTGTGGTTGGTATCGGTGGTGTCGGTTCCTGGGCGGCGGAAGCGCTGGCGCGCACGGGGATTGGCGCAATCACGCTTATCGATATGGATGATGTGTGCGTCACCAATACCAATCGGCAAATTCATGCCCTGCGCGATAACGTTGGGCTGGCAAAAGCGGAAGTTATGGCGGAGCGTATTCGCCAGATTAACCCGGAGTGCCGTGTAACGGTGGTGGATGATTTCGTGACGCCGGATAACGTAGCGCAGTATATGAGCGTGGGTTATTCGTACGTGATTGATGCCATTGATAGTGTACGGCCCAAAGCGGCGCTGATTGCTTATTGTCGGCGCAATAAAATCCCACTGGTCACAACCGGTGGCGCGGGTGGGCAGATTGATCCGACGCAGATTCAGGTTACCGATCTGGCGAAAACGATTCAGGACCCGCTGGCGGCGAAGTTGCGCGAGCGCCTGAAAAGCGATTTTGGCGTAGTGAAAAACAGTAAAGGTAAGCTCGGCGTGGATTGCGTGTTTTCTACTGAAGCGCTGGTGTACCCGCAGTCAGACGGTACGGTGTGTGCGATGAAAGCCACGGCAGAAGGGCCGAAGCGGATGGATTGTGCATCTGGATTTGGCGCGGCAACGATGGTGACCGCCACCTTTGGGTTTGTTGCGGTTTCTCATGCGCTGAAGAAGATGATGGCGAAAGCGGCGCGTCAGGGTTAA", + "dna_sequence_length": 807, + "functions": [ + "tRNA threonylcarbamoyladenosine dehydratase", + "sulfur acceptor for CsdA" + ], + "id": "CDS_2775", + "location": [ + [ + "NC_000913", + 2945842, + "-", + 807 + ] + ], + "md5": "fcae45b6217b1169fc70e0ba7b800974", + "parent_gene": "", + "protein_md5": "32cd920929ed503e35d0911bc3b6f973", + "protein_translation": "MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009228" + ], + [ + "gene_synonym", + "ECK2809" + ], + [ + "gene_synonym", + "EcoGene:EG13085" + ], + [ + "gene_synonym", + "GI:16130720" + ], + [ + "gene_synonym", + "GeneID:944964" + ], + [ + "gene_synonym", + "JW2784" + ], + [ + "gene_synonym", + "NP_417293.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A935" + ], + [ + "gene_synonym", + "b2813" + ], + [ + "gene_synonym", + "mlt" + ], + [ + "gene_synonym", + "mltA" + ], + [ + "gene_synonym", + "ygdM" + ] + ], + "dna_sequence": "ATGAAAGGACGTTGGGTAAAGTACCTTCTTATGGGCACGGTTGTGGCAATGCTTGCCGCCTGCTCTTCCAAACCAACCGATCGCGGACAGCAATATAAAGACGGGAAATTTACCCAGCCTTTCTCTCTGGTGAACCAGCCAGATGCCGTTGGCGCGCCGATTAACGCCGGTGATTTTGCCGAGCAAATTAACCATATCCGTAATTCGTCACCGCGTCTGTATGGCAACCAGAGTAATGTTTATAACGCGGTGCAAGAGTGGCTGCGCGCAGGCGGTGATACCCGCAATATGCGCCAGTTCGGCATTGATGCCTGGCAGATGGAAGGTGCCGACAACTATGGTAACGTGCAGTTTACCGGTTATTACACGCCGGTAATTCAGGCGCGCCATACCCGCCAGGGCGAGTTCCAGTATCCTATTTACCGTATGCCGCCAAAACGTGGTCGTCTGCCGTCTCGTGCGGAGATCTACGCGGGGGCATTGAGTGATAAATATATTCTCGCTTACAGTAACTCCCTGATGGATAACTTCATTATGGATGTGCAGGGTAGTGGGTATATCGACTTTGGTGATGGCAGTCCGCTTAACTTTTTCAGCTATGCAGGGAAAAACGGTCATGCCTATCGCAGCATTGGTAAGGTGCTGATCGACCGTGGCGAAGTGAAAAAAGAAGATATGTCGATGCAGGCGATTCGTCACTGGGGCGAAACACACAGTGAAGCCGAGGTTCGCGAGCTGCTGGAACAGAACCCGTCTTTCGTCTTCTTTAAACCGCAATCTTTTGCTCCGGTGAAAGGGGCAAGTGCGGTGCCGCTGGTTGGTCGCGCGTCAGTTGCCTCTGATCGTTCCATTATTCCGCCAGGTACTACCTTGCTGGCAGAAGTGCCGTTGCTGGATAATAACGGCAAATTTAATGGTCAGTACGAACTGCGTCTGATGGTGGCGCTGGATGTCGGTGGTGCAATCAAAGGCCAACACTTCGATATCTATCAAGGGATCGGGCCGGAAGCCGGACACCGCGCAGGTTGGTACAACCACTATGGACGTGTCTGGGTGCTGAAAACCGCCCCGGGCGCAGGTAACGTCTTTAGCGGCTGA", + "dna_sequence_length": 1098, + "functions": [ + "membrane-bound lytic murein transglycosylase A" + ], + "id": "CDS_2776", + "location": [ + [ + "NC_000913", + 2947178, + "-", + 1098 + ] + ], + "md5": "3361c592073245fa9e2766653cb628a7", + "parent_gene": "", + "protein_md5": "7a00ae8c22df3914bbbf3c359488f179", + "protein_translation": "MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009238" + ], + [ + "gene_synonym", + "ECK2813" + ], + [ + "gene_synonym", + "EcoGene:EG13086" + ], + [ + "gene_synonym", + "GI:90111492" + ], + [ + "gene_synonym", + "GeneID:947293" + ], + [ + "gene_synonym", + "JW5449" + ], + [ + "gene_synonym", + "NP_417294.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63883" + ], + [ + "gene_synonym", + "amiC" + ], + [ + "gene_synonym", + "b2817" + ], + [ + "gene_synonym", + "ygdN" + ] + ], + "dna_sequence": "ATGTCAGGATCCAACACTGCAATCAGCCGTCGTCGTTTACTGCAAGGCGCGGGTGCCATGTGGCTATTGAGCGTAAGTCAGGTCAGTCTGGCTGCGGTCAGCCAGGTCGTGGCGGTGCGCGTCTGGCCTGCGTCCAGCTACACCCGCGTGACGGTGGAATCAAATCGTCAGCTGAAATATAAGCAGTTCGCGTTGAGTAACCCTGAACGCGTGGTGGTGGATATCGAAGATGTAAACCTGAACTCGGTACTCAAGGGGATGGCGGCACAAATTCGTGCAGACGACCCGTTCATCAAGTCGGCGCGCGTCGGGCAATTTGACCCGCAAACCGTACGGATGGTTTTTGAATTAAAGCAAAACGTAAAACCGCAGCTGTTTGCCCTTGCGCCGGTCGCCGGGTTTAAAGAGCGTCTGGTGATGGACCTCTATCCGGCCAATGCACAGGATATGCAGGACCCGCTGCTGGCGCTGCTGGAGGATTACAACAAAGGCGACCTCGAAAAGCAGGTGCCGCCAGCGCAAAGTGGTCCACAACCGGGTAAAGCAGGGCGCGATCGTCCGATTGTCATTATGCTTGACCCTGGCCACGGTGGCGAAGACTCCGGTGCGGTGGGGAAATACAAAACGCGCGAAAAAGATGTGGTATTGCAAATAGCTCGCCGTTTGCGCTCTCTGATCGAGAAAGAGGGCAATATGAAGGTGTACATGACGCGCAATGAAGACATCTTCATTCCATTGCAAGTGCGCGTAGCAAAAGCCCAGAAACAGCGTGCTGACCTGTTTGTCTCTATCCATGCCGACGCCTTTACCAGTCGTCAGCCGAGCGGTTCCTCTGTGTTTGCGCTCTCAACCAAAGGTGCAACCAGTACTGCGGCAAAATATCTGGCACAAACCCAGAACGCCTCGGACTTGATTGGTGGCGTGAGCAAAAGCGGTGACCGCTATGTCGACCACACCATGTTCGATATGGTACAGTCGCTGACCATTGCCGACAGCCTGAAGTTTGGTAAAGCGGTACTGAATAAGCTCGGTAAAATCAACAAGCTGCATAAAAATCAAGTTGAACAGGCCGGGTTTGCCGTACTAAAGGCACCAGATATTCCCTCCATTCTGGTCGAAACGGCGTTTATCAGTAACGTTGAGGAAGAGCGTAAACTGAAAACGGCGACTTTCCAGCAGGAAGTTGCGGAGTCTATTCTTGCGGGGATTAAAGCGTATTTTGCCGATGGGGCGACGCTGGCGAGAAGGGGATGA", + "dna_sequence_length": 1254, + "functions": [ + "N-acetylmuramoyl-L-alanine amidase" + ], + "id": "CDS_2777", + "location": [ + [ + "NC_000913", + 2949010, + "-", + 1254 + ] + ], + "md5": "b479d3473e4a707a72f3543131e749e3", + "parent_gene": "", + "protein_md5": "e41cf79bbd5fb69fb0007a3feff0392a", + "protein_translation": "MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009245" + ], + [ + "gene_synonym", + "Arg1" + ], + [ + "gene_synonym", + "Arg2" + ], + [ + "gene_synonym", + "ECK2814" + ], + [ + "gene_synonym", + "EcoGene:EG10063" + ], + [ + "gene_synonym", + "GI:16130722" + ], + [ + "gene_synonym", + "GeneID:947289" + ], + [ + "gene_synonym", + "JW2786" + ], + [ + "gene_synonym", + "NP_417295.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6C5" + ], + [ + "gene_synonym", + "argA" + ], + [ + "gene_synonym", + "argB" + ], + [ + "gene_synonym", + "b2818" + ] + ], + "dna_sequence": "GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGAATATACGTGTGACCGACGCCAAAACACTGGAACTGGTGAAGCAGGCTGCGGGAACATTGCAACTGGATATTACTGCTCGCCTGTCGATGAGTCTCAATAACACGCCGCTGCAGGGCGCGCATATCAACGTCGTCAGTGGCAATTTTATTATTGCCCAGCCGCTGGGCGTCGATGACGGCGTGGATTACTGCCATAGCGGGCGTATCCGGCGGATTGATGAAGACGCGATCCATCGTCAACTGGACAGCGGTGCAATAGTGCTAATGGGGCCGGTCGCTGTTTCAGTCACTGGCGAGAGCTTTAACCTGACCTCGGAAGAGATTGCCACTCAACTGGCCATCAAACTGAAAGCTGAAAAGATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCGCAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTATTCAGCGCGATAACACGACTATTGCCTGCGCCGCGCTCTATCCGTTCCCGGAAGAGAAGATTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAGGCGAAGCAGAGCGGCTTAAGCAAATTGTTTGTGCTGACCACGCGCAGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAA", + "dna_sequence_length": 1332, + "functions": [ + "amino acid N-acetyltransferase and inactive acetylglutamate kinase" + ], + "id": "CDS_2778", + "location": [ + [ + "NC_000913", + 2949242, + "+", + 1332 + ] + ], + "md5": "6c24a6372e839afd07533b5ab02d11ea", + "parent_gene": "", + "protein_md5": "d7680e4d91f9ca14e4f6e4c08f7cdaa7", + "protein_translation": "MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009247" + ], + [ + "gene_synonym", + "ECK2815" + ], + [ + "gene_synonym", + "EcoGene:EG10826" + ], + [ + "gene_synonym", + "GI:16130723" + ], + [ + "gene_synonym", + "GeneID:947287" + ], + [ + "gene_synonym", + "JW2787" + ], + [ + "gene_synonym", + "NP_417296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04993" + ], + [ + "gene_synonym", + "b2819" + ], + [ + "gene_synonym", + "hopE" + ], + [ + "gene_synonym", + "recD" + ] + ], + "dna_sequence": "ATGAAATTGCAAAAGCAATTACTGGAAGCTGTGGAGCACAAACAGCTACGCCCGCTGGATGTGCAATTTGCCCTGACCGTGGCGGGAGATGAACATCCTGCCGTCACCCTCGCGGCGGCACTGTTAAGTCATGATGCCGGAGAGGGACACGTTTGTTTGCCGCTTTCACGACTGGAAAATAACGAGGCGTCGCATCCGCTGTTGGCGACCTGTGTCAGTGAAATCGGTGAGCTACAAAATTGGGAAGAATGCTTGCTGGCTTCTCAAGCGGTCAGCAGGGGAGATGAACCCACGCCGATGATCCTCTGTGGCGATCGTCTTTATTTGAATCGCATGTGGTGTAACGAGCGCACAGTGGCACGCTTTTTCAACGAAGTGAATCATGCCATTGAGGTTGATGAAGCTCTACTGGCGCAAACCCTGGACAAACTTTTTCCAGTAAGCGATGAAATTAACTGGCAAAAAGTTGCGGCGGCAGTGGCGCTGACGCGGCGGATCTCGGTGATTTCCGGCGGCCCTGGCACCGGTAAAACGACCACCGTAGCGAAGTTGCTGGCAGCGTTAATTCAAATGGCCGACGGCGAACGCTGCCGTATCCGTCTGGCTGCACCAACGGGTAAAGCTGCCGCGCGCTTAACCGAATCTCTCGGCAAGGCTTTGCGACAGTTACCGCTGACCGATGAACAAAAGAAACGCATTCCGGAAGATGCCAGCACTTTGCACCGATTGCTGGGCGCGCAGCCGGGTAGCCAGCGTTTACGTCATCATGCCGGTAACCCGCTGCATCTTGATGTGCTGGTGGTAGATGAAGCGTCAATGATCGATCTGCCTATGATGTCGAGACTGATCGACGCCTTGCCCGATCATGCGCGAGTGATCTTTCTCGGCGATCGTGATCAACTGGCCTCGGTTGAGGCTGGGGCTGTGCTGGGCGATATCTGCGCTTATGCCAACGCGGGCTTTACCGCCGAGCGTGCCAGGCAGCTAAGCCGCCTGACGGGGACTCACGTTCCGGCAGGAACCGGCACAGAAGCGGCATCTTTGCGCGACAGTCTCTGCCTGCTGCAAAAAAGCTATCGTTTCGGCAGCGATTCTGGCATTGGTCAGTTAGCTGCGGCGATCAACCGTGGTGATAAAACGGCAGTGAAAACCGTTTTTCAGCAGGATTTTACTGATATCGAAAAACGGCTTTTACAGAGCGGCGAAGATTATATTGCGATGCTTGAGGAAGCTCTTGCGGGTTACGGACGTTATCTGGATCTGCTGCAAGCGCGTGCCGAGCCGGATTTAATCATTCAGGCGTTCAATGAGTACCAGCTTTTGTGCGCCCTGCGGGAAGGGCCGTTTGGCGTGGCTGGACTGAATGAGCGAATTGAGCAGTTTATGCAACAGAAGCGCAAAATTCATCGTCATCCGCACTCTCGTTGGTACGAAGGTCGACCGGTGATGATTGCCCGTAATGACAGCGCGCTTGGGTTGTTTAATGGCGATATCGGTATTGCGCTGGATCGCGGGCAGGGGACGCGCGTCTGGTTTGCGATGCCGGACGGCAATATTAAGTCTGTGCAACCGAGTCGCTTGCCAGAGCACGAAACTACGTGGGCGATGACGGTACATAAATCGCAGGGATCGGAGTTCGACCATGCGGCGTTGATTTTGCCGAGCCAACGCACGCCGGTAGTAACGCGAGAGCTGGTTTATACCGCGGTGACCCGCGCGCGTCGCCGTCTGTCGCTGTATGCCGATGAGCGCATATTAAGTGCGGCAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAA", + "dna_sequence_length": 1827, + "functions": [ + "exonuclease V (RecBCD complex), alpha chain" + ], + "id": "CDS_2779", + "location": [ + [ + "NC_000913", + 2952461, + "-", + 1827 + ] + ], + "md5": "06af0ebafc24fbf3d94129ba37c8b1fc", + "parent_gene": "", + "protein_md5": "43c5d63879fbf7efa1bb8bd7ee5fb351", + "protein_translation": "MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE", + "protein_translation_length": 608, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009249" + ], + [ + "gene_synonym", + "ECK2816" + ], + [ + "gene_synonym", + "EcoGene:EG10824" + ], + [ + "gene_synonym", + "GI:16130724" + ], + [ + "gene_synonym", + "GeneID:947286" + ], + [ + "gene_synonym", + "JW2788" + ], + [ + "gene_synonym", + "NP_417297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08394" + ], + [ + "gene_synonym", + "b2820" + ], + [ + "gene_synonym", + "ior" + ], + [ + "gene_synonym", + "recB" + ], + [ + "gene_synonym", + "rorA" + ] + ], + "dna_sequence": "ATGAGTGATGTCGCCGAGACACTAGATCCTTTGCGCTTGCCCTTACAGGGTGAGCGCCTGATTGAAGCCTCTGCCGGCACAGGCAAAACCTTTACGATTGCGGCGCTCTATTTGCGCCTGTTACTTGGACTAGGCGGTTCCGCCGCCTTTCCCCGCCCGCTGACCGTTGAAGAACTGCTGGTGGTCACCTTTACCGAGGCTGCCACGGCAGAATTGCGCGGTCGTATCCGTAGCAATATCCACGAGTTGCGCATCGCCTGTCTGCGTGAAACCACCGACAATCCACTGTACGAACGCCTGCTGGAAGAGATCGACGATAAAGCGCAAGCCGCGCAGTGGTTGTTGTTAGCCGAACGGCAGATGGATGAAGCGGCAGTCTTTACTATTCACGGCTTTTGCCAGCGCATGCTCAACCTGAATGCCTTTGAATCCGGCATGCTGTTTGAGCAGCAGCTGATTGAAGATGAGTCTCTGCTACGCTACCAGGCCTGCGCCGATTTCTGGCGTCGCCACTGCTACCCGCTGCCGCGTGAAATAGCCCAGGTCGTCTTTGAAACCTGGAAAGGGCCGCAGGCGTTGCTGCGCGATATTAATCGTTATCTGCAAGGCGAAGCGCCGGTTATCAAAGCACCGCCGCCCGATGATGAAACGCTGGCTTCCCGTCACGCGCAAATTGTGGCGCGTATTGATACGGTAAAACAGCAGTGGCGCGACGCAGTGGGTGAACTGGATGCGCTGATCGAATCTTCTGGTATTGATCGACGCAAGTTTAACCGTAGCAATCAGGCTAAATGGATCGACAAGATCAGCGCCTGGGCAGAAGAAGAGACAAACAGTTATCAGTTGCCGGAGTCGCTGGAAAAATTCTCCCAGCGTTTCTTAGAAGATCGCACGAAGGCCGGGGGGGAAACCCCGCGACATCCACTGTTTGAGGCGATCGATCAACTGCTTGCAGAACCATTGTCGATCCGCGATCTGGTGATCACCCGCGCATTGGCTGAGATCCGCGAAACAGTAGCGCGTGAAAAACGCCGCCGTGGCGAATTGGGTTTTGATGACATGTTAAGTCGGCTCGATTCCGCGCTGCGTAGCGAAAGCGGTGAGGTGTTGGCAGCGGCGATCCGTACGCGATTCCCGGTGGCAATGATCGATGAATTTCAGGATACCGACCCCCAGCAGTACCGAATTTTTCGCCGTATCTGGCACCATCAGCCGGAAACCGCATTGTTGCTAATTGGCGACCCGAAGCAGGCCATATATGCATTCCGGGGTGCGGATATCTTCACTTATATGAAGGCGCGTAGCGAAGTTCACGCCCACTACACTTTAGACACCAACTGGCGTTCCGCACCAGGAATGGTGAACAGCGTGAATAAGCTTTTCAGCCAGACTGATGACGCGTTCATGTTTCGCGAAATACCGTTTATTCCAGTGAAATCAGCCGGGAAAAATCAGGCGTTACGTTTTGTATTTAAAGGTGAAACACAGCCTGCGATGAAAATGTGGCTGATGGAAGGCGAAAGCTGCGGCGTTGGCGATTATCAAAGTACCATGGCGCAGGTATGTGCTGCGCAAATCCGCGACTGGCTACAAGCCGGACAGCGGGGCGAAGCGTTGCTGATGAACGGCGACGACGCGCGTCCGGTGCGTGCTTCGGACATCAGTGTGCTGGTGCGCAGCCGCCAGGAGGCCGCCCAGGTGCGCGATGCCTTAACGTTGCTGGAAATCCCTTCCGTTTACCTTTCGAACCGCGACAGTGTTTTTGAAACTCTGGAAGCGCAGGAAATGCTTTGGTTGTTGCAGGCGGTGATGACGCCCGAACGTGAGAACACCCTGCGTAGTGCGCTGGCAACGTCAATGATGGGGCTGAACGCGCTGGATATCGAAACGCTGAACAATGACGAACATGCGTGGGATGTGGTAGTCGAAGAGTTCGATGGTTATCGGCAAATCTGGCGCAAACGTGGCGTTATGCCGATGCTGCGGGCGCTGATGTCGGCGCGTAACATTGCTGAAAACTTGCTGGCAACGGCAGGCGGTGAGCGGCGTCTTACCGATATCTTGCATATCAGCGAACTGCTACAAGAAGCCGGAACGCAGCTGGAAAGTGAACATGCGCTGGTACGCTGGTTATCGCAACATATCCTCGAGCCAGACAGTAATGCCTCCAGCCAACAAATGCGTCTCGAAAGTGATAAACATCTGGTGCAGATTGTCACGATCCACAAATCGAAAGGGCTGGAATATCCATTGGTCTGGCTGCCGTTTATCACCAATTTCCGCGTCCAGGAGCAGGCGTTTTATCACGATCGCCACTCGTTTGAGGCAGTTCTGGATCTTAATGCTGCGCCAGAAAGCGTCGACCTCGCGGAGGCCGAACGTCTGGCGGAAGATCTGCGTTTGCTTTACGTGGCGCTGACACGTTCGGTTTGGCATTGCAGTCTCGGCGTTGCACCGCTGGTGCGCCGTCGTGGCGATAAAAAAGGTGACACCGACGTCCACCAAAGTGCGCTCGGGCGTTTGCTGCAAAAAGGGGAACCGCAAGATGCGGCAGGGCTTCGCACCTGTATTGAAGCGTTATGCGATGATGATATTGCCTGGCAAACGGCACAAACTGGTGATAACCAACCCTGGCAGGTTAATGATGTTTCTACAGCAGAGCTGAATGCGAAGACGTTACAACGATTGCCCGGCGATAACTGGCGCGTCACCAGCTACTCTGGTTTGCAACAGCGTGGTCACGGTATCGCCCAGGATTTGATGCCTCGGCTGGATGTCGATGCTGCAGGCGTTGCCAGCGTCGTTGAAGAACCGACGTTAACACCACATCAGTTTCCGCGCGGTGCGTCACCGGGGACGTTCTTGCACAGTTTGTTTGAAGACCTGGATTTTACCCAGCCGGTTGACCCGAACTGGGTGCGGGAAAAACTGGAACTCGGCGGCTTTGAATCGCAGTGGGAACCGGTATTGACCGAGTGGATCACGGCTGTCCTCCAGGCACCTCTCAATGAAACCGGCGTAAGCCTGAGTCAACTTTCCGCCCGCAATAAACAGGTGGAGATGGAGTTTTATCTGCCGATTAGTGAACCGCTTATCGCCAGTCAGCTTGATACGTTAATCCGCCAGTTTGACCCGCTATCCGCAGGCTGCCCGCCGCTGGAGTTCATGCAGGTACGTGGCATGTTAAAAGGCTTTATCGACCTGGTGTTCCGCCACGAAGGGCGTTATTACCTGCTCGACTATAAATCCAACTGGTTGGGTGAAGACAGTTCGGCTTACACCCAACAGGCTATGGCAGCGGCAATGCAGGCACACCGCTATGATCTGCAATATCAGCTTTATACCCTGGCGCTGCATCGTTATCTGCGCCATCGCATTGCTGATTACGACTATGAGCACCACTTTGGCGGCGTTATTTATCTGTTCCTGCGTGGCGTTGATAAAGAACATCCGCAACAGGGGATTTACACAACCCGACCCAACGCCGGGTTGATTGCCCTGATGGATGAGATGTTTGCCGGTATGACCCTGGAGGAGGCGTAA", + "dna_sequence_length": 3543, + "functions": [ + "exonuclease V (RecBCD complex), beta subunit" + ], + "id": "CDS_2780", + "location": [ + [ + "NC_000913", + 2956003, + "-", + 3543 + ] + ], + "md5": "cb4ca10cee7cc364b064f02b47e875af", + "parent_gene": "", + "protein_md5": "0056f083a72f8d0989b4e00704f0bfa9", + "protein_translation": "MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA", + "protein_translation_length": 1180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009252" + ], + [ + "gene_synonym", + "ECK2817" + ], + [ + "gene_synonym", + "EcoGene:EG10786" + ], + [ + "gene_synonym", + "GI:16130725" + ], + [ + "gene_synonym", + "GeneID:947284" + ], + [ + "gene_synonym", + "JW2789" + ], + [ + "gene_synonym", + "NP_417298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05458" + ], + [ + "gene_synonym", + "b2821" + ], + [ + "gene_synonym", + "ptr" + ], + [ + "gene_synonym", + "ptrA" + ] + ], + "dna_sequence": "ATGCCCCGCAGCACCTGGTTCAAAGCATTATTGTTGTTAGTTGCCCTTTGGGCACCCTTAAGTCAGGCAGAAACGGGATGGCAGCCGATTCAGGAAACCATCCGTAAAAGTGATAAAGATAACCGCCAGTATCAGGCTATACGTCTGGATAACGGTATGGTGGTCTTGCTGGTTTCTGATCCGCAGGCAGTTAAATCGCTCTCGGCGCTGGTGGTGCCCGTTGGGTCGCTGGAAGATCCCGAGGCGTACCAGGGGCTGGCACATTACCTTGAACATATGAGTCTGATGGGGTCGAAAAAGTACCCGCAGGCTGACAGTCTGGCCGAATATCTCAAAATGCACGGCGGTAGTCACAATGCCAGCACTGCGCCGTATCGCACGGCTTTCTATCTGGAAGTTGAGAACGACGCCTTGCCTGGTGCGGTAGACCGCCTGGCCGATGCTATTGCTGAACCTTTGCTCGACAAGAAATATGCCGAACGTGAGCGTAATGCGGTGAACGCTGAATTAACCATGGCGCGTACGCGTGACGGGATGCGCATGGCACAGGTCAGCGCAGAAACCATTAACCCGGCACACCCCGGTTCAAAGTTTTCTGGTGGTAACCTCGAAACTTTAAGCGACAAACCTGGTAATCCGGTGCAGCAGGCGCTGAAAGATTTCCACGAGAAGTACTATTCCGCCAATTTGATGAAGGCGGTTATTTACAGTAATAAACCGCTGCCGGAGTTGGCAAAAATGGCGGCGGACACCTTTGGTCGCGTGCCGAACAAAGAGAGCAAAAAACCGGAAATCACCGTGCCGGTAGTCACCGACGCGCAAAAGGGCATTATCATTCATTACGTCCCTGCGCTGCCGCGTAAAGTGTTGCGCGTTGAGTTTCGCATCGATAACAACTCAGCGAAGTTCCGTAGTAAAACCGATGAATTGATTACCTATCTGATTGGCAATCGCAGCCCAGGTACACTTTCTGACTGGCTGCAAAAGCAGGGATTAGTTGAGGGCATTAGCGCCAACTCCGATCCTATCGTCAACGGCAACAGCGGCGTATTAGCGATCTCTGCGTCTTTAACCGATAAAGGCCTGGCTAATCGCGATCAGGTTGTGGCGGCAATTTTTAGCTATCTCAATCTGTTACGTGAAAAAGGCATTGATAAACAATACTTCGATGAACTGGCGAATGTGCTGGATATCGACTTCCGTTATCCGTCGATCACCCGTGATATGGATTACGTCGAATGGCTGGCAGATACCATGATTCGCGTTCCTGTTGAGCATACGCTGGATGCAGTCAATATTGCCGATCGGTACGATGCTAAAGCAGTAAAGGAACGTCTGGCGATGATGACGCCGCAGAATGCGCGTATCTGGTATATCAGCCCGAAAGAGCCGCACAACAAAACGGCTTACTTTGTCGATGCGCCGTATCAGGTCGATAAAATCAGCGCACAAACTTTCGCCGACTGGCAGAAAAAAGCCGCCGACATTGCGCTCTCTTTGCCAGAGCTTAACCCTTATATTCCTGATGATTTCTCGCTGATTAAGTCAGAGAAGAAATACGACCATCCAGAGCTGATTGTTGATGAGTCGAATCTGCGCGTGGTGTATGCGCCAAGCCGTTATTTTGCCAGCGAGCCCAAAGCTGATGTCAGCCTGATTTTGCGTAATCCGAAAGCCATGGACAGCGCCCGCAATCAGGTGATGTTTGCGCTCAATGATTATCTCGCAGGGCTGGCGCTTGATCAGTTAAGCAACCAGGCGTCGGTTGGTGGCATAAGTTTTTCCACCAACGCTAACAACGGCCTTATGGTTAATGCTAATGGTTACACCCAGCGTCTGCCGCAGCTGTTCCAGGCATTGCTCGAGGGGTACTTTAGCTATACCGCTACGGAAGATCAGCTTGAGCAGGCGAAGTCCTGGTATAACCAGATGATGGATTCCGCAGAAAAGGGTAAAGCGTTTGAGCAGGCGATTATGCCCGCGCAGATGCTCTCGCAAGTGCCGTACTTCTCGCGAGATGAACGGCGTAAAATTTTGCCCTCCATTACGTTGAAAGAGGTGCTGGCCTATCGCGACGCCTTAAAATCAGGGGCTCGACCAGAGTTTATGGTTATCGGCAACATGACCGAGGCCCAGGCAACAACGCTGGCACGCGATGTGCAAAAACAGTTGGGCGCTGATGGTTCAGAGTGGTGTCGAAACAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGCGGTATTTGTACCGACTGGCTACGATGAATACACCAGCTCAGCCTATAGCTCTCTGTTGGGGCAGATCGTACAGCCGTGGTTCTACAATCAGTTGCGTACCGAAGAACAATTGGGCTATGCCGTGTTTGCGTTTCCAATGAGCGTGGGGCGTCAGTGGGGCATGGGCTTCCTTTTGCAAAGCAATGATAAACAGCCTTCATTCTTGTGGGAGCGTTACAAGGCGTTTTTCCCAACCGCAGAGGCAAAATTGCGAGCGATGAAGCCAGATGAGTTTGCGCAAATCCAGCAGGCGGTAATTACCCAGATGCTGCAGGCACCGCAAACGCTCGGCGAAGAAGCATCGAAGTTAAGTAAAGATTTCGATCGCGGCAATATGCGCTTCGATTCGCGTGATAAAATCGTGGCCCAGATAAAACTGCTGACGCCGCAAAAACTTGCTGATTTCTTCCATCAGGCGGTGGTCGAGCCGCAAGGCATGGCTATTCTGTCGCAGATTTCCGGCAGCCAGAACGGGAAAGCCGAATATGTACACCCTGAAGGCTGGAAAGTGTGGGAGAACGTCAGCGCGTTGCAGCAAACAATGCCCCTGATGAGTGAAAAGAATGAGTGA", + "dna_sequence_length": 2889, + "functions": [ + "protease III" + ], + "id": "CDS_2781", + "location": [ + [ + "NC_000913", + 2958884, + "-", + 2889 + ] + ], + "md5": "e20c28761a88f41e9abdbca4f0b3b9ca", + "parent_gene": "", + "protein_md5": "9617c6dfd595a41a4f9436331fa5191f", + "protein_translation": "MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE", + "protein_translation_length": 962, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009255" + ], + [ + "gene_synonym", + "ECK2818" + ], + [ + "gene_synonym", + "EcoGene:EG10825" + ], + [ + "gene_synonym", + "GI:16130726" + ], + [ + "gene_synonym", + "GeneID:947294" + ], + [ + "gene_synonym", + "JW2790" + ], + [ + "gene_synonym", + "NP_417299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07648" + ], + [ + "gene_synonym", + "b2822" + ], + [ + "gene_synonym", + "recC" + ] + ], + "dna_sequence": "ATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACGCGAACGGCTGGACGATCCTTTCGAACCAGAGATGATTCTGGTGCAAAGTACCGGTATGGCACAGTGGCTGCAAATGACCCTGTCGCAAAAGTTTGGTATTGCGGCAAACATTGATTTTCCGCTGCCAGCGAGCTTTATCTGGGATATGTTCGTCCGGGTGTTACCGGAAATCCCCAAAGAGAGCGCCTTTAACAAACAGAGCATGAGCTGGAAACTGATGACTCTGCTGCCGCAATTGCTGGAGCGCGAAGACTTTACCCTGTTGCGGCATTATCTGACTGACGATAGCGACAAGCGAAAACTGTTCCAGCTTTCCTCAAAAGCGGCGGACCTGTTTGACCAGTATCTGGTCTATCGTCCGGACTGGCTGGCACAGTGGGAAACAGGACATTTGGTTGAAGGGCTGGGAGAAGCACAGGCCTGGCAAGCCCCGTTGTGGAAGGCGCTGGTGGAATATACCCATCAACTCGGGCAACCGCGCTGGCACCGCGCCAATCTCTATCAGCGCTTTATCGAAACGCTGGAGTCCGCGACGACCTGCCCGCCGGGGTTACCTTCGCGCGTCTTTATATGCGGTATTTCCGCGTTACCGCCTGTTTATCTCCAGGCGCTACAGGCGCTGGGTAAACATATTGAAATCCATCTCCTGTTTACCAACCCCTGCCGTTATTACTGGGGCGATATTAAAGATCCTGCTTATCTGGCGAAACTGCTGACCCGTCAGCGTCGACACAGTTTTGAAGATCGCGAATTGCCGCTATTTCGTGATAGCGAAAATGCCGGGCAGCTCTTTAACAGCGATGGTGAACAGGATGTCGGCAACCCGCTGCTGGCTTCATGGGGTAAGCTTGGGCGCGACTACATTTATCTCCTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAACATTCAGTCTGACATTCTGGAACTGGAAAACCGCGCCGTTGCTGGTGTGAACATCGAAGAGTTTTCCCGTAGCGATAACAAACGCCCGCTTGATCCACTGGATAGCAGTATCACCTTCCACGTTTGCCATAGCCCGCAGCGTGAAGTTGAAGTTTTACACGATCGCCTGCTGGCGATGCTGGAGGAAGACCCGACACTTACTCCGCGCGACATCATCGTGATGGTGGCTGATATCGACAGCTACAGTCCGTTTATTCAGGCTGTGTTTGGTAGCGCACCTGCGGATCGTTACCTACCTTACGCCATTTCCGACCGTCGTGCGCGGCAGTCACATCCGGTACTGGAAGCGTTTATCAGCCTGTTATCACTGCCTGACAGTCGTTTTGTGTCAGAGGATGTGCTGGCGTTGCTGGATGTGCCGGTGCTGGCGGCGCGGTTTGACATCACCGAAGAAGGGCTGCGTTATTTACGCCAGTGGGTCAACGAATCCGGCATTCGTTGGGGCATAGATGACGACAACGTTCGCGAGCTGGAACTCCCCGCCACCGGACAACACACCTGGCGATTTGGCCTGACGCGTATGTTGTTGGGCTACGCGATGGAGAGCGCGCAGGGCGAGTGGCAATCGGTTCTACCTTATGATGAATCGAGCGGCTTAATTGCAGAACTGGTGGGGCATCTGGCTTCACTGCTAATGCAGCTAAACATCTGGCGTCGCGGGCTGGCACAGGAGCGTCCGCTGGAAGAGTGGTTGCCGGTTTGTCGCGATATGCTCAACGCCTTCTTCCTGCCGGATGCGGAAACCGAAGCGGCGATGACGCTGATCGAACAACAATGGCAGGCGATTATCGCCGAAGGTTTAGGTGCGCAGTATGGCGACGCGGTGCCGCTGTCACTATTGCGTGATGAACTGGCACAGCGTCTGGATCAAGAACGTATCAGCCAGCGTTTTCTCGCCGGACCGGTTAACATTTGTACTCTGATGCCAATGCGTTCAATTCCGTTCAAAGTGGTTTGCCTGCTGGGAATGAACGACGGCGTTTATCCACGTCAGCTTGCGCCATTGGGCTTTGACCTGATGAGCCAGAAACCGAAGCGTGGCGACCGTAGCCGTCGCGATGACGACCGCTATCTGTTCCTGGAAGCGTTAATTTCCGCGCAGCAAAAACTCTATATCAGCTATATCGGTCGTTCCATTCAGGATAACAGTGAGCGTTTCCCGTCGGTACTGGTGCAGGAACTGATCGACTACATCGGGCAAAGTCATTATCTACCGGGCGATGAAGCGCTCAACTGTGATGAAAGCGAGGCAAGGGTAAAAGCGCATCTTACTTGCCTCCATACCCGGATGCCGTTTGATCCACAAAACTACCAGCCAGGCGAACGACAAAGCTATGCTCGTGAATGGCTACCTGCGGCCAGCCAGGCTGGTAAAGCACATTCTGAATTTGTTCAGCCGCTGCCGTTTACCTTACCGGAAACCGTGCCGCTGGAAACGCTACAACGATTCTGGGCACATCCGGTGCGGGCATTTTTCCAGATGCGTTTGCAGGTGAACTTCCGTACTGAAGACAGCGAAATCCCCGACACCGAGCCATTTATTCTGGAAGGACTTAGCCGTTATCAAATCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGCTTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAGTCATTGCCTGTCGCCAGCCGGGGCAGAGTATGGAAATTGATCTCGCCTGCAACGGTGTGCAGATAACTGGCTGGTTGCCGCAGGTGCAGCCGGATGGCCTGTTGCGCTGGCGTCCCTCTTTATTAAGTGTGGCCCAGGGAATGCAACTTTGGCTGGAACACCTTGTCTACTGTGCCAGCGGTGGTAATGGTGAAAGTCGCCTTTTTCTACGCAAAGACGGCGAGTGGCGTTTTCCGCCGCTTGCAGCCGAACAGGCTTTGCATTACCTCTCACAACTGATTGAGGGGTATCGTGAAGGAATGTCCGCGCCATTGCTGGTGTTACCTGAAAGTGGCGGCGCGTGGCTAAAAACCTGTTATGACGCGCAAAACGATGCCATGCTGGATGACGATTCCACGTTGCAAAAAGCCCGTACGAAATTCCTTCAGGCTTACGAAGGCAACATGATGGTGCGTGGCGAAGGTGATGATATCTGGTATCAAAGGCTCTGGCGGCAATTAACACCAGAGACAATGGAGGCCATCGTTGAACAGTCGCAACGTTTCCTGTTACCGCTGTTTCGCTTTAATCAGTCATGA", + "dna_sequence_length": 3369, + "functions": [ + "exonuclease V (RecBCD complex), gamma chain" + ], + "id": "CDS_2782", + "location": [ + [ + "NC_000913", + 2962428, + "-", + 3369 + ] + ], + "md5": "db1861c2faab41c1aa37ee9024f113d3", + "parent_gene": "", + "protein_md5": "ebd54a341452c559eeb434dc78c4dc05", + "protein_translation": "MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS", + "protein_translation_length": 1122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009257" + ], + [ + "gene_synonym", + "ECK2819" + ], + [ + "gene_synonym", + "EcoGene:EG11154" + ], + [ + "gene_synonym", + "GI:16130727" + ], + [ + "gene_synonym", + "GeneID:945797" + ], + [ + "gene_synonym", + "JW2791" + ], + [ + "gene_synonym", + "NP_417300.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08372" + ], + [ + "gene_synonym", + "b2823" + ], + [ + "gene_synonym", + "ppdC" + ], + [ + "gene_synonym", + "ygdA" + ] + ], + "dna_sequence": "ATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGCCTGCCGGAGGTAATGTTGGCGATGGTGTTGATGGTGATGATTGTCACTGCGTTATCGGGTTTCCAGCGAACATTAATGAACAGTCTTGCCAGCAGAAACCAGTACCAACAGCTCTGGCGGCATGGCTGGCAGCAAACGCAACTGCGCGCGATTTCGCCACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTCACCCGGGGGCAGAGAAGGCGAGATGACCCGCCTGCATTGCCCGAATCGTCAGTAG", + "dna_sequence_length": 324, + "functions": [ + "putative prepilin peptidase-dependent protein" + ], + "id": "CDS_2783", + "location": [ + [ + "NC_000913", + 2962764, + "-", + 324 + ] + ], + "md5": "6f69186112c441e3bed03b5b113f22f8", + "parent_gene": "", + "protein_md5": "597443f5e272a0bebe1ff718dc35d025", + "protein_translation": "MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009261" + ], + [ + "gene_synonym", + "ECK2820" + ], + [ + "gene_synonym", + "EcoGene:EG11155" + ], + [ + "gene_synonym", + "GI:90111493" + ], + [ + "gene_synonym", + "GeneID:944763" + ], + [ + "gene_synonym", + "JW5450" + ], + [ + "gene_synonym", + "NP_417301.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08370" + ], + [ + "gene_synonym", + "b2824" + ], + [ + "gene_synonym", + "ygdB" + ] + ], + "dna_sequence": "GTGAACCGCGAAAAGGGTGTTTCGTCACTGGCTCTGGTCCTGATGCTGCTGGTTTTGGGTAGTTTGCTATTACAAGGAATGAGCCAACAGGATCGCAGTTTTGCCTCTCGCGTGAGCATGGAAAGTCAGTCATTGCGCCGCCAGGCCATCGTTCAGTCGGCGCTGGCGTGGGGAAAAATGCACTGCTGGCAGACGCAGCCAGCAGTTCAGTGCTCGCAGTACGCTGAAACCGATGCCCAGGTTTGTTTGCGTTTACTGGCAGATAATGAAGCCTTATTGATTGCCGGTTATGAAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATTGATGGAAACATTGTTTTTTCGCCACGCGGCTGGAGCGATTTTTGTCCGCTGAAAGAGAGGGCGTTATGTCAGCTTCCCTGA", + "dna_sequence_length": 408, + "functions": [ + "DUF2509 family protein" + ], + "id": "CDS_2784", + "location": [ + [ + "NC_000913", + 2963156, + "-", + 408 + ] + ], + "md5": "8be29649910dab946a744600fefdf5d9", + "parent_gene": "", + "protein_md5": "f48a80eba1d67addf0752e776d64f4b1", + "protein_translation": "MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009263" + ], + [ + "gene_synonym", + "ECK2821" + ], + [ + "gene_synonym", + "EcoGene:EG11156" + ], + [ + "gene_synonym", + "GI:16130729" + ], + [ + "gene_synonym", + "GeneID:948985" + ], + [ + "gene_synonym", + "JW5451" + ], + [ + "gene_synonym", + "NP_417302.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08371" + ], + [ + "gene_synonym", + "b2825" + ], + [ + "gene_synonym", + "ppdB" + ], + [ + "gene_synonym", + "ygdC" + ] + ], + "dna_sequence": "ATGCCTGTAAAAGAGCAAGGTTTTTCTCTGCTGGAAGTGTTGATTGCTATGGCGATCAGTAGCGTATTGTTGCTGGGGGCGGCACGCTTTCTGCCTGCGTTACAGCGTGAAAGTTTAACGAGCACCCGTAAGCTGGCGCTGGAAGATGAAATCTGGCTGCGGGTATTTACCGTCGCGAAGCATCTCCAGAGGGCGGGTTATTGTCATGGCATCTGTACCGGCGAAGGGCTGGAAATTGTCGGACAGGGTGACTGTGTCATTGTGCAGTGGGATGCGAACAGTAACGGTATCTGGGATCGCGAACCGGTAAAAGAGTCCGACCAGATTGGATTTCGTCTGAAGGAGCATGTGCTGGAAACGCTACGCGGTGCGACATCCTGTGAAGGTAAGGGCTGGGATAAAGTCACTAATCCGGATGCCATCATTATCGACACTTTTCAGGTCGTACGTCAGGATGTCAGCGGCTTCTCGCCGGTGTTGACGGTTAATATGCGTGCTGCCAGTAAGTCTGAACCGCAAACCGTGGTGAATGCCAGCTATAGCGTGACAGGATTCAACCTGTGA", + "dna_sequence_length": 564, + "functions": [ + "putative prepilin peptidase-dependent protein" + ], + "id": "CDS_2785", + "location": [ + [ + "NC_000913", + 2963716, + "-", + 564 + ] + ], + "md5": "78d6a0ff625ff2fd7a0450626c239a88", + "parent_gene": "", + "protein_md5": "3efdf52fe3cd187c36223c2fe632d255", + "protein_translation": "MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009266" + ], + [ + "gene_synonym", + "ECK2822" + ], + [ + "gene_synonym", + "EcoGene:EG12081" + ], + [ + "gene_synonym", + "GI:16130730" + ], + [ + "gene_synonym", + "GeneID:945393" + ], + [ + "gene_synonym", + "JW2794" + ], + [ + "gene_synonym", + "NP_417303.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33554" + ], + [ + "gene_synonym", + "b2826" + ], + [ + "gene_synonym", + "ppdA" + ] + ], + "dna_sequence": "ATGAAAACACAACGTGGTTATACGCTGATTGAAACGCTGGTCGCGATGCTGATTTTGGTCATGCTAAGCGCAAGTGGACTCTATGGCTGGCAATACTGGCAGCAGTCGCAACGGCTATGGCAAACCGCCAGCCAGGCGCGGGACTATTTGCTCTATTTACGTGAAGATGCCAACTGGCATAACCGCGACCACAGTATCAGCGTTATCAGGGAGGGGACGTTATGGTGCCTTGTGAGTTCCGCTGCTGGGGCCAATACCTGTCATGGCAGTTCACCATTGGTCTTTGTGCCACGCTGGCCCGAAGTCGAAATGAGCGACCTGACACCTTCGCTTGCTTTCTTTGGCCTGCGCAATACCGCATGGGCCGGGCATATTCGCTTCAAAAACTCAACGGGCGAGTGGTGGCTGGTGGTTTCGCCGTGGGGAAGACTCCGGCTTTGTCAGCAAGGAGAAACAGAAGGATGCCTGTAA", + "dna_sequence_length": 471, + "functions": [ + "putative prepilin peptidase-dependent protein" + ], + "id": "CDS_2786", + "location": [ + [ + "NC_000913", + 2964177, + "-", + 471 + ] + ], + "md5": "824293cd4cf540dfd5ecb795e2111c21", + "parent_gene": "", + "protein_md5": "a4c23d26076794fa60d262ffc28d8875", + "protein_translation": "MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009268" + ], + [ + "gene_synonym", + "ECK2823" + ], + [ + "gene_synonym", + "EcoGene:EG11002" + ], + [ + "gene_synonym", + "GI:16130731" + ], + [ + "gene_synonym", + "GeneID:949035" + ], + [ + "gene_synonym", + "JW2795" + ], + [ + "gene_synonym", + "NP_417304.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A884" + ], + [ + "gene_synonym", + "b2827" + ], + [ + "gene_synonym", + "thyA" + ] + ], + "dna_sequence": "ATGAAACAGTATTTAGAACTGATGCAAAAAGTGCTCGACGAAGGCACACAGAAAAACGACCGTACCGGAACCGGAACGCTTTCCATTTTTGGTCATCAGATGCGTTTTAACCTGCAAGATGGATTCCCGCTGGTGACAACTAAACGTTGCCACCTGCGTTCCATCATCCATGAACTGCTGTGGTTTCTGCAGGGCGACACTAACATTGCTTATCTACACGAAAACAATGTCACCATCTGGGACGAATGGGCCGATGAAAACGGCGACCTCGGGCCAGTGTATGGTAAACAGTGGCGCGCCTGGCCAACGCCAGATGGTCGTCATATTGACCAGATCACTACGGTACTGAACCAGCTGAAAAACGACCCGGATTCGCGCCGCATTATTGTTTCAGCGTGGAACGTAGGCGAACTGGATAAAATGGCGCTGGCACCGTGCCATGCATTCTTCCAGTTCTATGTGGCAGACGGCAAACTCTCTTGCCAGCTTTATCAGCGCTCCTGTGACGTCTTCCTCGGCCTGCCGTTCAACATTGCCAGCTACGCGTTATTGGTGCATATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTGATTTTGTCTGGACCGGTGGCGACACGCATCTGTACAGCAACCATATGGATCAAACTCATCTGCAATTAAGCCGCGAACCGCGTCCGCTGCCGAAGTTGATTATCAAACGTAAACCCGAATCCATCTTCGACTACCGTTTCGAAGACTTTGAGATTGAAGGCTACGATCCGCATCCGGGCATTAAAGCGCCGGTGGCTATCTAA", + "dna_sequence_length": 795, + "functions": [ + "thymidylate synthetase" + ], + "id": "CDS_2787", + "location": [ + [ + "NC_000913", + 2965155, + "-", + 795 + ] + ], + "md5": "b77c2a27fa2946992b13f1c2cae3163c", + "parent_gene": "", + "protein_md5": "188a9c3fc4031be2e94cdf304e4a6cb2", + "protein_translation": "MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009270" + ], + [ + "gene_synonym", + "ECK2824" + ], + [ + "gene_synonym", + "EcoGene:EG12128" + ], + [ + "gene_synonym", + "GI:16130732" + ], + [ + "gene_synonym", + "GeneID:947303" + ], + [ + "gene_synonym", + "JW2796" + ], + [ + "gene_synonym", + "NP_417305.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60955" + ], + [ + "gene_synonym", + "b2828" + ], + [ + "gene_synonym", + "lgt" + ], + [ + "gene_synonym", + "umpA" + ] + ], + "dna_sequence": "ATGACCAGTAGCTATCTGCATTTTCCGGAGTTTGATCCGGTCATTTTCTCAATAGGACCCGTGGCGCTTCACTGGTACGGCCTGATGTATCTGGTGGGTTTCATTTTTGCAATGTGGCTGGCAACACGACGGGCGAATCGTCCGGGCAGCGGCTGGACCAAAAATGAAGTTGAAAACTTACTCTATGCGGGCTTCCTCGGCGTCTTCCTCGGGGGACGTATTGGTTATGTTCTGTTCTACAATTTCCCGCAGTTTATGGCCGATCCGCTGTATCTGTTCCGTGTCTGGGACGGCGGCATGTCTTTCCACGGCGGCCTGATTGGCGTTATCGTGGTGATGATTATCTTCGCCCGCCGTACTAAACGTTCCTTCTTCCAGGTCTCTGATTTTATCGCACCACTCATTCCGTTTGGTCTTGGTGCCGGGCGTCTGGGCAACTTTATTAACGGTGAATTGTGGGGCCGCGTTGACCCGAACTTCCCGTTTGCCATGCTGTTCCCTGGCTCCCGTACAGAAGATATTTTGCTGCTGCAAACCAACCCGCAGTGGCAATCCATTTTCGACACTTACGGTGTGCTGCCGCGCCACCCATCACAGCTTTACGAGCTGCTGCTGGAAGGTGTGGTGCTGTTTATTATCCTCAACCTGTATATTCGTAAACCACGCCCAATGGGAGCTGTCTCAGGTTTGTTCCTGATTGGTTACGGCGCGTTTCGCATCATTGTTGAGTTTTTCCGCCAGCCCGACGCGCAGTTTACCGGTGCCTGGGTGCAGTACATCAGCATGGGGCAAATTCTTTCCATCCCGATGATTGTCGCGGGTGTGATCATGATGGTCTGGGCATATCGTCGCAGCCCACAGCAACACGTTTCCTGA", + "dna_sequence_length": 876, + "functions": [ + "phosphatidylglycerol-prolipoprotein diacylglyceryl transferase" + ], + "id": "CDS_2788", + "location": [ + [ + "NC_000913", + 2966037, + "-", + 876 + ] + ], + "md5": "ae29760c7c5ad1fd4d1934f285ee793d", + "parent_gene": "", + "protein_md5": "9e23702219d06826b81dbc87632ba4fd", + "protein_translation": "MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009274" + ], + [ + "gene_synonym", + "ECK2825" + ], + [ + "gene_synonym", + "EcoGene:EG12188" + ], + [ + "gene_synonym", + "GI:16130733" + ], + [ + "gene_synonym", + "GeneID:947301" + ], + [ + "gene_synonym", + "JW2797" + ], + [ + "gene_synonym", + "NP_417306.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37177" + ], + [ + "gene_synonym", + "b2829" + ], + [ + "gene_synonym", + "ptsP" + ], + [ + "gene_synonym", + "ygdF" + ], + [ + "gene_synonym", + "ygdO" + ] + ], + "dna_sequence": "ATGCTCACTCGCCTGCGCGAAATAGTCGAAAAGGTAGCCAGCGCACCACGCCTGAATGAGGCGTTAAATATTCTGGTTACCGACATCTGTCTTGCGATGGATACCGAGGTCTGTTCGGTCTACCTGGCCGATCATGATCGACGTTGTTACTACCTGATGGCGACCCGGGGGCTGAAAAAACCACGCGGTCGCACTGTAACGCTCGCGTTTGATGAAGGGATCGTCGGCCTGGTTGGCAGGCTGGCGGAACCGATAAACCTTGCAGATGCGCAAAAGCACCCCAGCTTCAAATACATCCCCTCCGTAAAAGAAGAACGTTTCCGCGCGTTTTTAGGCGTACCAATTATTCAACGTCGCCAGTTGCTTGGTGTACTGGTGGTACAGCAACGAGAGTTGCGCCAGTATGACGAAAGTGAAGAATCCTTCCTGGTGACGCTTGCCACCCAGATGGCAGCTATTCTTTCTCAGTCGCAGTTGACTGCCTTGTTTGGGCAATATCGCCAGACGCGAATCCGCGCATTACCGGCAGCACCTGGTGTGGCGATTGCCGAAGGCTGGCAGGATGCCACGTTACCTTTAATGGAACAGGTGTATCAGGCATCAACGCTGGATCCGGCTCTGGAACGCGAACGACTGACCGGGGCGCTGGAAGAAGCGGCAAACGAGTTTCGCCGCTACAGCAAACGCTTTGCCGCCGGTGCACAAAAAGAAACGGCGGCTATTTTCGATCTTTACTCGCACCTGCTTTCGGACACCCGGCTGCGTCGCGAATTGTTTGCCGAGGTTGATAAAGGCTCGGTGGCAGAGTGGGCGGTAAAAACGGTCATTGAAAAATTTGCCGAACAGTTTGCCGCGCTAAGTGATAACTATCTCAAAGAGCGGGCTGGCGATTTACGTGCGCTGGGTCAGCGATTGCTGTTTCATCTTGATGACGCTAATCAAGGGCCGAACGCCTGGCCGGAACGTTTCATTCTGGTGGCAGATGAACTGTCAGCGACAACGCTTGCTGAGCTGCCCCAGGATCGCTTAGTCGGTGTTGTCGTGCGAGATGGCGCAGCCAACTCCCATGCTGCGATCATGGTACGTGCGCTGGGGATCCCTACCGTGATGGGCGCGGATATTCAGCCTTCGGTGCTGCATCGTAGGACGCTGATCGTTGATGGCTATCGCGGTGAATTGCTGGTCGATCCGGAGCCGGTACTGCTGCAAGAATATCAGCGGCTAATTAGTGAAGAGATTGAGCTTAGCCGTCTGGCGGAAGATGACGTCAATTTACCCGCGCAGTTAAAAAGCGGTGAGCGTATAAAAGTCATGCTCAATGCTGGTTTAAGCCCGGAACATGAAGAAAAACTGGGCAGCCGTATTGATGGCATCGGTCTTTATCGCACTGAAATCCCATTCATGCTGCAAAGTGGTTTCCCGTCGGAAGAAGAACAGGTGGCGCAGTATCAGGGGATGCTGCAAATGTTCAATGATAAACCCGTCACCTTGCGTACGCTGGATGTCGGAGCAGATAAGCAGCTGCCTTACATGCCGATCAGCGAAGAGAATCCATGCCTGGGTTGGCGTGGGATTCGCATTACGCTCGATCAGCCGGAGATCTTCTTGATCCAGGTGCGGGCGATGCTGCGTGCTAATGCCGCTACGGGCAACCTGAATATTCTGTTGCCGATGGTCACAAGCCTCGATGAAGTTGATGAAGCACGCCGCCTGATTGAACGTGCCGGACGTGAAGTCGAGGAGATGATCGGTTACGAAATTCCCAAACCACGTATCGGCATCATGCTGGAAGTGCCGTCAATGGTATTTATGCTGCCGCATCTGGCAAAGCGGGTCGATTTCATCTCTGTTGGCACCAACGATCTGACTCAATACATTCTGGCCGTTGATCGCAACAATACCCGGGTGGCGAACATTTATGACAGTCTTCATCCTGCAATGTTACGAGCTCTGGCGATGATCGCCCGGGAAGCGGAAATACATGGAATCGATCTCCGTTTGTGCGGTGAAATGGCGGGCGATCCCATGTGCGTGGCAATCCTCATTGGGCTTGGGTATCGCCATCTGTCTATGAACGGACGTTCTGTAGCGCGGGCAAAATACCTGCTGCGGCGCATTGATTATGCCGAAGCAGAAAATCTTGCGCAGCGTAGTCTGGAAGCGCAACTGGCGACCGAAGTTCGCCATCAGGTTGCAGCCTTTATGGAGCGTCGCGGCATGGGCGGGCTGATTCGCGGAGGGTTATAG", + "dna_sequence_length": 2247, + "functions": [ + "PEP-protein phosphotransferase enzyme I", + "GAF domain containing protein" + ], + "id": "CDS_2789", + "location": [ + [ + "NC_000913", + 2968434, + "-", + 2247 + ] + ], + "md5": "7c3bcb9c963a82c1776ce0fc028c78aa", + "parent_gene": "", + "protein_md5": "6d7044950507cb1eb4f2370fb1f2e6e3", + "protein_translation": "MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARAKYLLRRIDYAEAENLAQRSLEAQLATEVRHQVAAFMERRGMGGLIRGGL", + "protein_translation_length": 748, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009276" + ], + [ + "gene_synonym", + "ECK2826" + ], + [ + "gene_synonym", + "EcoGene:EG13091" + ], + [ + "gene_synonym", + "GI:16130734" + ], + [ + "gene_synonym", + "GeneID:947300" + ], + [ + "gene_synonym", + "JW2798" + ], + [ + "gene_synonym", + "NP_417307.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A776" + ], + [ + "gene_synonym", + "b2830" + ], + [ + "gene_synonym", + "nudH" + ], + [ + "gene_synonym", + "rppH" + ], + [ + "gene_synonym", + "ygdP" + ] + ], + "dna_sequence": "GTGATTGATGACGATGGCTACCGCCCAAACGTAGGTATCGTGATTTGTAATCGCCAGGGGCAGGTAATGTGGGCCCGGCGATTTGGTCAGCACTCCTGGCAATTTCCGCAAGGCGGAATCAACCCCGGAGAATCCGCAGAGCAGGCGATGTACCGTGAATTGTTTGAAGAAGTAGGATTAAGCCGCAAAGACGTTCGAATCCTTGCTTCAACGCGTAACTGGTTGCGCTACAAATTACCGAAACGTTTGGTGCGTTGGGACACGAAGCCGGTTTGTATCGGCCAAAAACAAAAATGGTTTCTCTTGCAGCTGGTGAGCGGCGATGCAGAAATCAATATGCAAACCAGCAGTACACCAGAGTTTGACGGCTGGCGATGGGTAAGTTACTGGTATCCGGTCAGACAGGTGGTGTCATTTAAACGTGATGTCTACCGTAGGGTAATGAAAGAGTTCGCGAGTGTGGTGATGTCACTGCAGGAAAATACGCCAAAACCACAAAACGCATCTGCTTATCGACGTAAAAGAGGTTAA", + "dna_sequence_length": 531, + "functions": [ + "RNA pyrophosphohydrolase" + ], + "id": "CDS_2790", + "location": [ + [ + "NC_000913", + 2968977, + "-", + 531 + ] + ], + "md5": "82a883d420bd87a6544a9be3593bc372", + "parent_gene": "", + "protein_md5": "176d1a8220b81f2b982a567b39c44cc4", + "protein_translation": "MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009287" + ], + [ + "gene_synonym", + "ECK2827" + ], + [ + "gene_synonym", + "EcoGene:EG10624" + ], + [ + "gene_synonym", + "GI:16130735" + ], + [ + "gene_synonym", + "GeneID:947299" + ], + [ + "gene_synonym", + "JW2799" + ], + [ + "gene_synonym", + "NP_417308.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06722" + ], + [ + "gene_synonym", + "b2831" + ], + [ + "gene_synonym", + "mutH" + ], + [ + "gene_synonym", + "mutR" + ], + [ + "gene_synonym", + "prv" + ] + ], + "dna_sequence": "ATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTGGGAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCTCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACAAACTCAAACGCGTACTGTGGATACCGGTTGAAGGCGAGCGCAGCATCCCGCTGGCGCAGCGTCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGGAAGAATTAATGGATATGATTGTTCTCGGTCAGGTTGAGCGGATTACCGCTCGTCACGGGGAGTATTTACAGATACGACCGAAAGCAGCGAATGCGAAAGCGCTTACCGAAGCCATTGGTGCCCGGGGCGAACGGATTCTGACGCTGCCACGCGGCTTTTATTTGAAGAAGAATTTCACCAGTGCACTACTGGCCCGTCATTTTCTGATCCAGTAG", + "dna_sequence_length": 690, + "functions": [ + "methyl-directed mismatch repair protein" + ], + "id": "CDS_2791", + "location": [ + [ + "NC_000913", + 2969662, + "+", + 690 + ] + ], + "md5": "7ca50a900b8a02292a871127a6982d9d", + "parent_gene": "", + "protein_md5": "906e95a9b8e65d3c6633793cd3ad14c5", + "protein_translation": "MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALVGLVTPENLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEELMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFTSALLARHFLIQ", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009290" + ], + [ + "gene_synonym", + "ECK2828" + ], + [ + "gene_synonym", + "EcoGene:EG13092" + ], + [ + "gene_synonym", + "GI:16130736" + ], + [ + "gene_synonym", + "GeneID:947295" + ], + [ + "gene_synonym", + "JW2800" + ], + [ + "gene_synonym", + "NP_417309.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67127" + ], + [ + "gene_synonym", + "b2832" + ], + [ + "gene_synonym", + "ygdQ" + ] + ], + "dna_sequence": "ATGTTATTTGCATGGATAACCGATCCTAACGCCTGGCTTGCGCTCGGTACGCTGACGCTGCTGGAGATCGTTCTTGGGATCGACAATATTATTTTCCTTTCTCTGGTGGTGGCAAAGCTTCCCACAGCACAACGTGCTCATGCGCGCCGTCTGGGGTTGGCGGGAGCCATGGTTATGCGTCTGGCGCTGCTGGCATCAATCGCCTGGGTTACGCGCCTGACAAATCCGCTTTTTACAATATTCAGTCAGGAAATTTCTGCCCGTGATTTGATTCTGCTTCTGGGTGGCTTGTTCCTTATCTGGAAAGCCAGCAAGGAAATCCACGAATCCATTGAAGGTGAAGAAGAAGGGCTGAAAACACGCGTTTCATCATTCCTCGGCGCTATCGTGCAGATTATGCTGCTGGATATTATCTTTAGCCTCGACTCGGTGATTACGGCTGTGGGTCTGTCAGATCACCTGTTTATTATGATGGCAGCCGTGGTGATTGCCGTAGGCGTGATGATGTTCGCCGCGCGCTCGATTGGTGATTTTGTCGAACGCCATCCTTCGGTAAAAATGCTGGCGCTCTCTTTCCTGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTGA", + "dna_sequence_length": 714, + "functions": [ + "UPF0053 family inner membrane protein" + ], + "id": "CDS_2792", + "location": [ + [ + "NC_000913", + 2970420, + "+", + 714 + ] + ], + "md5": "ef41f297d5b2f92aea363ab9e61c8181", + "parent_gene": "", + "protein_md5": "ec3710bdce58c83c1c423dbf2ef76d99", + "protein_translation": "MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNLIRNKKNPL", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009293" + ], + [ + "gene_synonym", + "ECK2829" + ], + [ + "gene_synonym", + "EcoGene:EG13076" + ], + [ + "gene_synonym", + "GI:16130737" + ], + [ + "gene_synonym", + "GeneID:947304" + ], + [ + "gene_synonym", + "JW2801" + ], + [ + "gene_synonym", + "NP_417310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65294" + ], + [ + "gene_synonym", + "b2833" + ], + [ + "gene_synonym", + "ygdR" + ] + ], + "dna_sequence": "ATGAAAAAATGGGCAGTAATAATTTCTGCAGTCGGACTGGCGTTTGCTGTTTCCGGGTGTTCCAGTGATTACGTCATGGCGACCAAAGATGGCCGTATGATTTTGACCGATGGAAAACCTGAAATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAA", + "dna_sequence_length": 219, + "functions": [ + "DUF903 family verified lipoprotein" + ], + "id": "CDS_2793", + "location": [ + [ + "NC_000913", + 2971271, + "+", + 219 + ] + ], + "md5": "76cd04756476dc26cad22bdba28b5b92", + "parent_gene": "", + "protein_md5": "0b48a9e1f99ef82a0bed4c2f17b46097", + "protein_translation": "MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVSQIIER", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009298" + ], + [ + "gene_synonym", + "ECK2830" + ], + [ + "gene_synonym", + "EcoGene:EG13093" + ], + [ + "gene_synonym", + "GI:16130738" + ], + [ + "gene_synonym", + "GeneID:947306" + ], + [ + "gene_synonym", + "JW2802" + ], + [ + "gene_synonym", + "NP_417311.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T4" + ], + [ + "gene_synonym", + "b2834" + ], + [ + "gene_synonym", + "tas" + ], + [ + "gene_synonym", + "ygdS" + ] + ], + "dna_sequence": "ATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCGACGCCCACGCACAACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCGCGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTCGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGTATTGTCACCATTCAGAACCCTTACAGTCTGTTAAACCGCAGTTTTGAAGTAGGTCTGGCAGAAGTCAGCCAGTATGAAGGGGTCGAACTGCTGGCCTATTCGTGCCTGGGTTTCGGCACGCTGACCGGGAAATATCTCAATGGTGCAAAACCCGCTGGCGCACGTAATACGCTCTTTAGTCGGTTCACCCGCTATAGCGGTGAGCAAACGCAAAAAGCCGTCGCGGCGTATGTTGATATCGCCAGACGTCATGGCCTGGACCCTGCTCAGATGGCGCTCGCGTTTGTACGCCGTCAACCGTTTGTTGCCAGCACTCTGCTGGGCGCAACCACGATGGATCAGCTGAAAACTAACATCGAAAGTTTGCATCTGGAGTTAAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAA", + "dna_sequence_length": 1041, + "functions": [ + "putative NADP(H)-dependent aldo-keto reductase" + ], + "id": "CDS_2794", + "location": [ + [ + "NC_000913", + 2971597, + "+", + 1041 + ] + ], + "md5": "f84813a87e7b8de4e59d83148569c5b7", + "parent_gene": "", + "protein_md5": "5f414d399df3441134a17c6e35b3487a", + "protein_translation": "MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009300" + ], + [ + "gene_synonym", + "ECK2831" + ], + [ + "gene_synonym", + "EcoGene:EG12455" + ], + [ + "gene_synonym", + "GI:16130739" + ], + [ + "gene_synonym", + "GeneID:947317" + ], + [ + "gene_synonym", + "JW2803" + ], + [ + "gene_synonym", + "NP_417312.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39196" + ], + [ + "gene_synonym", + "b2835" + ], + [ + "gene_synonym", + "lplT" + ], + [ + "gene_synonym", + "ygeD" + ] + ], + "dna_sequence": "ATGAGTGAGTCAGTGCACACTAACACTTCGTTGTGGTCGAAGGGGATGAAAGCGGTTATCGTGGCGCAGTTTCTCTCTGCGTTTGGCGATAATGCCCTACTGTTTGCCACTCTGGCGTTACTGAAAGCGCAGTTCTATCCGGAGTGGAGCCAGCCCATCCTGCAAATGGTGTTTGTAGGTGCTTACATTCTTTTTGCGCCGTTTGTCGGGCAGGTGGCGGATAGCTTCGCCAAAGGCCGGGTGATGATGTTTGCCAACGGCCTGAAGCTGCTGGGCGCAGCCAGTATCTGCTTTGGTATCAATCCGTTTCTCGGCTATACGCTGGTGGGTGTTGGTGCTGCAGCCTATTCACCGGCGAAATACGGTATTCTCGGCGAATTAACCACGGGTAGTAAGTTAGTGAAAGCTAACGGTTTAATGGAAGCTTCTACCATAGCGGCGATTTTGCTCGGTTCCGTAGCCGGTGGTGTGCTGGCTGACTGGCATGTCCTCGTCGCCCTGGCCGCATGCGCACTGGCCTACGGTGGTGCGGTCGTTGCCAATATCTACATTCCCAAACTGGCGGCGGCGCGTCCGGGGCAGTCCTGGAATCTCATCAACATGACCCGCAGTTTCCTGAATGCCTGCACCTCGCTATGGCGCAATGGTGAAACGCGTTTTTCGCTGGTGGGCACCAGTTTATTCTGGGGAGCGGGTGTCACGCTGCGTTTCCTGTTGGTGCTGTGGGTACCGGTGGCGCTGGGCATTACCGATAACGCTACGCCCACCTATCTCAACGCGATGGTAGCGATTGGTATCGTGGTTGGCGCAGGTGCGGCAGCGAAGTTAGTTACGCTGGAAACCGTGTCACGCTGTATGCCAGCCGGGATTTTGATTGGCGTGGTGGTACTGATTTTTTCCCTGCAACACGAGCTGCTGCCAGCCTATGCCTTGTTGATGCTGATTGGCGTGATGGGGGGCTTTTTTGTCGTTCCGCTCAATGCGTTGCTACAGGAGCGGGGTAAAAAAAGCGTCGGGGCGGGGAATGCGATTGCAGTACAAAACCTTGGCGAAAACAGCGCCATGTTGTTGATGCTGGGCATTTACTCGCTGGCGGTAATGATAGGCATCCCGGTCGTGCCCATTGGCATTGGCTTCGGTGCGCTGTTTGCGCTGGCAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAA", + "dna_sequence_length": 1194, + "functions": [ + "lysophospholipid transporter" + ], + "id": "CDS_2795", + "location": [ + [ + "NC_000913", + 2973862, + "-", + 1194 + ] + ], + "md5": "a72cacc57a8aee9d25c75351f7ca5338", + "parent_gene": "", + "protein_md5": "1026896290f734e7d904f3ba74bc8838", + "protein_translation": "MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH", + "protein_translation_length": 397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009302" + ], + [ + "gene_synonym", + "ECK2832" + ], + [ + "gene_synonym", + "EcoGene:EG11679" + ], + [ + "gene_synonym", + "GI:16130740" + ], + [ + "gene_synonym", + "GeneID:947315" + ], + [ + "gene_synonym", + "JW2804" + ], + [ + "gene_synonym", + "NP_417313.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31119" + ], + [ + "gene_synonym", + "aas" + ], + [ + "gene_synonym", + "b2836" + ] + ], + "dna_sequence": "ATGCTTTTTAGCTTTTTTCGAAATTTGTGCCGTGTTTTGTATCGCGTTCGCGTTACGGGTGACACCCAGGCACTGAAGGGCGAGCGCGTTCTAATTACGCCTAATCACGTCTCTTTTATTGATGGCATTTTGCTTGGACTGTTTTTACCTGTGCGTCCAGTGTTTGCCGTTTACACCTCAATAAGCCAACAGTGGTATATGCGTTGGCTGAAATCATTTATCGACTTTGTTCCTCTCGACCCGACGCAACCTATGGCTATTAAACATCTGGTACGTCTGGTGGAACAGGGCCGACCAGTGGTGATTTTCCCTGAAGGACGCATCACCACGACAGGCTCGCTGATGAAAATCTACGATGGCGCGGGTTTTGTCGCGGCGAAGTCTGGTGCAACGGTTATTCCTGTGCGTATTGAAGGGGCGGAACTTACGCACTTCAGCCGCCTGAAAGGTCTGGTTAAACGTCGCTTGTTCCCGCAAATTACTCTGCATATTTTGCCACCAACGCAGGTGGCGATGCCGGATGCGCCGCGTGCCCGTGACCGTCGCAAAATCGCTGGCGAAATGCTGCATCAAATAATGATGGAAGCGCGAATGGCGGTGCGCCCGCGTGAAACGCTGTACGAATCTTTACTGAGTGCAATGTACCGCTTCGGAGCCGGGAAGAAATGTGTCGAAGACGTCAACTTTACCCCAGACTCCTATCGCAAATTGCTTACGAAAACGCTGTTTGTTGGACGCATCCTTGAAAAATACAGTGTTGAAGGCGAACGCATCGGCTTAATGCTGCCCAATGCAGGCATCAGTGCGGCAGTGATTTTTGGGGCCATCGCCCGTCGCCGCATGCCCGCAATGATGAACTACACTGCCGGGGTAAAAGGGCTGACCAGTGCTATTACGGCGGCTGAAATCAAAACCATCTTCACTTCCCGCCAGTTTCTCGATAAAGGCAAACTCTGGCATCTGCCGGAGCAACTTACTCAGGTGCGCTGGGTCTATCTGGAAGATTTAAAAGCAGATGTCACCACTGCCGACAAAGTATGGATCTTCGCTCATTTGCTGATGCCGCGTCTGGCACAGGTTAAACAGCAGCCGGAAGAAGAGGCGCTGATCCTTTTTACCTCCGGTTCTGAAGGCCATCCGAAAGGCGTCGTCCATAGCCATAAAAGCATTCTGGCGAATGTCGAGCAGATTAAAACGATTGCCGACTTCACCACCAACGATCGCTTTATGTCGGCGTTACCGCTGTTTCACTCCTTTGGGCTGACGGTAGGCCTGTTTACGCCACTGCTTACAGGTGCAGAAGTGTTCCTTTATCCAAGCCCGCTGCATTACCGCATTGTGCCGGAGTTGGTGTATGACCGCAGTTGCACCGTGTTGTTCGGCACCTCGACTTTCCTCGGTCACTACGCGCGTTTCGCCAACCCGTATGACTTCTATCGTCTACGCTATGTGGTGGCAGGCGCAGAAAAATTACAAGAAAGTACCAAACAGCTTTGGCAGGATAAATTTGGCCTGCGCATCCTTGAAGGCTACGGCGTGACCGAATGCGCGCCTGTCGTTTCTATCAACGTACCGATGGCGGCGAAACCCGGTACGGTAGGGCGTATTCTACCAGGAATGGATGCGCGCCTGTTGTCGGTCCCTGGTATCGAAGAGGGCGGACGCCTGCAACTGAAAGGGCCGAACATAATGAACGGCTATCTGCGGGTGGAGAAGCCAGGTGTACTGGAAGTGCCCACCGCCGAGAATGTTCGCGGCGAAATGGAGCGCGGCTGGTATGACACTGGCGATATTGTGCGTTTTGACGAGCAGGGCTTTGTGCAGATTCAGGGCCGCGCAAAACGCTTTGCCAAAATTGCAGGCGAAATGGTGTCGCTGGAAATGGTGGAACAACTGGCACTTGGTGTTTCGCCAGATAAAGTCCATGCCACTGCGATTAAGAGCGATGCCAGCAAAGGCGAGGCACTGGTGCTTTTCACCACAGATAACGAACTGACGCGCGATAAGTTGCAACAGTATGCCCGCGAGCACGGCGTGCCGGAGCTTGCTGTACCGCGCGATATTCGCTATCTGAAACAGATGCCATTACTTGGCAGCGGCAAACCTGACTTTGTCACGTTGAAAAGCTGGGTAGACGAAGCGGAACAACACGATGAGTGA", + "dna_sequence_length": 2160, + "functions": [ + "fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase" + ], + "id": "CDS_2796", + "location": [ + [ + "NC_000913", + 2976014, + "-", + 2160 + ] + ], + "md5": "cc793f1fee98473d78f26ed44e6c683c", + "parent_gene": "", + "protein_md5": "b6563a329f81b8b7b406eacc500fac72", + "protein_translation": "MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE", + "protein_translation_length": 719, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009307" + ], + [ + "gene_synonym", + "ECK2835" + ], + [ + "gene_synonym", + "EcoGene:EG10364" + ], + [ + "gene_synonym", + "GI:16130741" + ], + [ + "gene_synonym", + "GeneID:947314" + ], + [ + "gene_synonym", + "JW2805" + ], + [ + "gene_synonym", + "NP_417314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03024" + ], + [ + "gene_synonym", + "b2837" + ], + [ + "gene_synonym", + "galR" + ] + ], + "dna_sequence": "ATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTAGCTATCACCCGAACGCCAACGCCCGTGCGCTGGCGCAGCAGACCACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGAGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATCCTGCCTGGCTTTGAAAACCGTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTCTGCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGGAAGAAATTTCACTGCGGTAGCCTGTTATAACGATTCAATGGCGGCGGGTGCGATGGGCGTTCTCAATGATAATGGTATTGATGTACCGGGTGAGATTTCGTTAATTGGCTTTGATGATGTGCTGGTGTCACGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAA", + "dna_sequence_length": 1032, + "functions": [ + "galactose-inducible d-galactose regulon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_2797", + "location": [ + [ + "NC_000913", + 2976599, + "+", + 1032 + ] + ], + "md5": "e90db74e3e74880be6969371c44bdbfb", + "parent_gene": "", + "protein_md5": "5ecc3e5982945c7eb445da4c620dac51", + "protein_translation": "MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009309" + ], + [ + "gene_synonym", + "ECK2836" + ], + [ + "gene_synonym", + "EcoGene:EG10549" + ], + [ + "gene_synonym", + "GI:16130742" + ], + [ + "gene_synonym", + "GeneID:947313" + ], + [ + "gene_synonym", + "JW2806" + ], + [ + "gene_synonym", + "NP_417315.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00861" + ], + [ + "gene_synonym", + "b2838" + ], + [ + "gene_synonym", + "lysA" + ] + ], + "dna_sequence": "ATGCCACATTCACTGTTCAGCACCGATACCGATCTCACCGCCGAAAATCTGCTGCGTTTGCCCGCTGAATTTGGCTGCCCGGTGTGGGTCTACGATGCGCAAATTATTCGTCGGCAGATTGCAGCGCTGAAACAGTTTGATGTGGTGCGCTTTGCACAGAAAGCCTGTTCCAATATTCATATTTTGCGCTTAATGCGTGAGCAGGGCGTGAAAGTGGATTCCGTCTCGTTAGGCGAAATAGAGCGTGCGTTGGCGGCGGGTTACAATCCGCAAACGCACCCCGATGATATTGTTTTTACGGCAGATGTTATCGATCAGGCGACGCTTGAACGCGTCAGTGAATTGCAAATTCCGGTGAATGCGGGTTCTGTTGATATGCTCGACCAACTGGGCCAGGTTTCGCCAGGGCATCGGGTATGGCTGCGCGTTAATCCGGGGTTTGGTCACGGACATAGCCAAAAAACCAATACCGGTGGCGAAAACAGCAAGCACGGTATCTGGTACACCGATCTGCCCGCCGCACTGGACGTGATACAACGTCATCATCTGCAGCTGGTCGGCATTCACATGCACATTGGTTCTGGCGTTGATTATGCCCATCTGGAACAGGTGTGTGGTGCTATGGTGCGTCAGGTCATCGAATTCGGTCAGGATTTACAGGCTATTTCTGCGGGCGGTGGGCTTTCTGTTCCTTATCAACAGGGTGAAGAGGCGGTTGATACCGAACATTATTATGGTCTGTGGAATGCCGCGCGTGAGCAAATCGCCCGCCATTTGGGCCACCCTGTGAAACTGGAAATTGAACCGGGTCGCTTCCTGGTAGCGCAGTCTGGCGTATTAATTACTCAGGTGCGGAGCGTCAAACAAATGGGGAGCCGCCACTTTGTGCTGGTTGATGCCGGGTTCAACGATCTGATGCGCCCGGCAATGTACGGTAGTTACCACCATATCAGTGCCCTGGCAGCTGATGGTCGTTCTCTGGAACACGCGCCAACGGTGGAAACCGTCGTCGCCGGACCGTTATGTGAATCGGGCGATGTCTTTACCCAGCAGGAAGGGGGAAATGTTGAAACCCGCGCCTTGCCGGAAGTGAAGGCAGGTGATTATCTGGTACTGCATGATACAGGGGCATATGGCGCATCAATGTCATCCAACTACAATAGCCGTCCGCTGTTACCAGAAGTTCTGTTTGATAATGGTCAGGCGCGGTTGATTCGCCGTCGCCAGACCATCGAAGAATTACTGGCGCTGGAATTGCTTTAA", + "dna_sequence_length": 1263, + "functions": [ + "diaminopimelate decarboxylase, PLP-binding" + ], + "id": "CDS_2798", + "location": [ + [ + "NC_000913", + 2978899, + "-", + 1263 + ] + ], + "md5": "150313bdc9dc9379b3504f8b0a00659e", + "parent_gene": "", + "protein_md5": "ca1063d432cd5ee537a415830b61244f", + "protein_translation": "MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL", + "protein_translation_length": 420, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009313" + ], + [ + "gene_synonym", + "ECK2837" + ], + [ + "gene_synonym", + "EcoGene:EG10551" + ], + [ + "gene_synonym", + "GI:16130743" + ], + [ + "gene_synonym", + "GeneID:947311" + ], + [ + "gene_synonym", + "JW2807" + ], + [ + "gene_synonym", + "NP_417316.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03030" + ], + [ + "gene_synonym", + "b2839" + ], + [ + "gene_synonym", + "lysR" + ] + ], + "dna_sequence": "ATGGCCGCCGTTAACTTACGTCATATTGAAATTTTTCATGCGGTAATGACCGCCGGAAGCCTGACTGAGGCGGCACACCTGCTACACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGAGTTTCGCCAGGGAGAACTGTCTATTGCCTGCCTGCCGGTCTTTTCGCAATCTTTTTTACCGCAGCTCCTGCAACCCTTTCTGGCACGTTATCCCGATGTCAGCTTAAATATCGTGCCCCAGGAATCACCGCTACTTGAAGAGTGGCTCTCGGCCCAGCGTCATGATTTAGGACTCACTGAAACGCTCCATACGCCTGCGGGAACAGAACGTACCGAATTACTCTCTTTAGATGAAGTGTGTGTGTTACCTCCGGGTCATCCGCTGGCGGTAAAAAAGGTATTAACGCCGGATGATTTTCAGGGTGAGAACTACATCAGCCTTTCCCGTACTGACAGCTATCGCCAGTTGCTGGATCAGCTATTTACTGAACATCAGGTTAAACGACGCATGATCGTAGAAACCCACAGCGCCGCGTCAGTCTGCGCAATGGTACGGGCGGGGGTAGGTATTTCGGTGGTTAACCCGCTCACCGCACTAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGGTTCAGTATTGCGGTTCCGTTCACCGTCAGCCTGATCCGCCCCCTGCACCGCCCGTCATCAGCGCTGGTTCAGGCGTTTAGTGGGCATTTACAAGCGGGGTTACCGAAACTGGTCACTTCTCTTGACGCTATTTTGTCGTCAGCTACGACAGCATAA", + "dna_sequence_length": 936, + "functions": [ + "transcriptional activator of lysA", + "autorepressor" + ], + "id": "CDS_2799", + "location": [ + [ + "NC_000913", + 2979021, + "+", + 936 + ] + ], + "md5": "145802e895635277c0bdb5b1fc77c7c9", + "parent_gene": "", + "protein_md5": "8f06cdf609cc9068d25506aa8d5385fe", + "protein_translation": "MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009315" + ], + [ + "gene_synonym", + "ECK2838" + ], + [ + "gene_synonym", + "EcoGene:EG11157" + ], + [ + "gene_synonym", + "GI:16130744" + ], + [ + "gene_synonym", + "GeneID:947348" + ], + [ + "gene_synonym", + "JW2808" + ], + [ + "gene_synonym", + "NP_417317.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03813" + ], + [ + "gene_synonym", + "b2840" + ], + [ + "gene_synonym", + "ygeA" + ] + ], + "dna_sequence": "ATGAAAACAATTGGTTTGCTGGGAGGAATGAGCTGGGAATCCACCATTCCTTACTATCGTTTGATAAATGAAGGCATTAAACAGCGGCTTGGTGGGCTTCACTCTGCGCAAGTGCTGCTACATAGCGTCGATTTTCATGAAATAGAAGAGTGCCAGCGTCGCGGGGAATGGGATAAAACCGGGGACATTCTGGCTGAGGCGGCGCTTGGCTTACAGCGGGCGGGCGCAGAAGGTATTGTGCTATGTACCAATACGATGCATAAAGTGGCGGATGCCATTGAGTCACGTTGCACTCTGCCTTTCTTACACATTGCGGATGCCACCGGACGTGCAATTACCGGGGCCGGAATGACTCGTGTGGCGCTGCTGGGTACGCGTTACACCATGGAACAGGATTTTTATCGCGGGCGGCTGACGGAACAATTTTCCATCAATTGTCTTATTCCTGAAGCGGATGAACGGGCGAAAATTAATCAGATTATTTTTGAAGAACTGTGTCTGGGGCAATTTACCGAAGCGTCACGCGCTTATTGTGCGCAAGTGATTGCTCGCCTTGCAGAACAGGGCGCACAGGGCGTCATTTTTGGCTGCACAGAAATTGGTTTACTGGTGCCAGAAGAGCGCAGTGTTTTGCCTGTGTTTGATACCGCGGCGATCCATGCCGAGGATGCTGTCGCTTTTATGCTGTCGTAG", + "dna_sequence_length": 693, + "functions": [ + "Asp/Glu_racemase family protein" + ], + "id": "CDS_2800", + "location": [ + [ + "NC_000913", + 2980635, + "-", + 693 + ] + ], + "md5": "bb31d68eec8f4a6e4199d5f9db639de3", + "parent_gene": "", + "protein_md5": "50b6523e7b1ee39a47d6d54927c327dd", + "protein_translation": "MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009319" + ], + [ + "gene_synonym", + "ECK2839" + ], + [ + "gene_synonym", + "EcoGene:EG10056" + ], + [ + "gene_synonym", + "GI:16130745" + ], + [ + "gene_synonym", + "GeneID:947341" + ], + [ + "gene_synonym", + "JW2809" + ], + [ + "gene_synonym", + "NP_417318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE24" + ], + [ + "gene_synonym", + "araE" + ], + [ + "gene_synonym", + "b2841" + ] + ], + "dna_sequence": "ATGGTTACTATCAATACGGAATCTGCTTTAACGCCACGTTCTTTGCGGGATACGCGGCGTATGAATATGTTTGTTTCGGTAGCTGCTGCGGTCGCAGGATTGTTATTTGGTCTTGATATCGGCGTAATCGCCGGAGCGTTGCCGTTCATTACCGATCACTTTGTGCTGACCAGTCGTTTGCAGGAATGGGTGGTTAGTAGCATGATGCTCGGTGCAGCAATTGGTGCGCTGTTTAATGGTTGGCTGTCGTTCCGCCTGGGGCGTAAATACAGCCTGATGGCGGGGGCCATCCTGTTTGTACTCGGTTCTATAGGGTCCGCTTTTGCGACCAGCGTAGAGATGTTAATCGCCGCTCGTGTGGTGCTGGGCATTGCTGTCGGGATCGCGTCTTACACCGCTCCTCTGTATCTTTCTGAAATGGCAAGTGAAAACGTTCGCGGTAAGATGATCAGTATGTACCAGTTGATGGTCACACTCGGCATCGTGCTGGCGTTTTTATCCGATACAGCGTTCAGTTATAGCGGTAACTGGCGCGCAATGTTGGGGGTTCTTGCTTTACCAGCAGTTCTGCTGATTATTCTGGTAGTCTTCCTGCCAAATAGCCCGCGCTGGCTGGCGGAAAAGGGGCGTCATATTGAGGCGGAAGAAGTATTGCGTATGCTGCGCGATACGTCGGAAAAAGCGCGAGAAGAACTCAACGAAATTCGTGAAAGCCTGAAGTTAAAACAGGGCGGTTGGGCACTGTTTAAGATCAACCGTAACGTCCGTCGTGCTGTGTTTCTCGGTATGTTGTTGCAGGCGATGCAGCAGTTTACCGGTATGAACATCATCATGTACTACGCGCCGCGTATCTTCAAAATGGCGGGCTTTACGACCACAGAACAACAGATGATTGCGACTCTGGTCGTAGGGCTGACCTTTATGTTCGCCACCTTTATTGCGGTGTTTACGGTAGATAAAGCAGGGCGTAAACCGGCTCTGAAAATTGGTTTCAGCGTGATGGCGTTAGGCACTCTGGTGCTGGGCTATTGCCTGATGCAGTTTGATAACGGTACGGCTTCCAGTGGCTTGTCCTGGCTCTCTGTTGGCATGACGATGATGTGTATTGCCGGTTATGCGATGAGCGCCGCGCCAGTGGTGTGGATCCTGTGCTCTGAAATTCAGCCGCTGAAATGCCGCGATTTCGGTATTACCTGTTCGACCACCACGAACTGGGTGTCGAATATGATTATCGGCGCGACCTTCCTGACACTGCTTGATAGCATTGGCGCTGCCGGTACGTTCTGGCTCTACACTGCGCTGAACATTGCGTTTGTGGGCATTACTTTCTGGCTCATTCCGGAAACCAAAAATGTCACGCTGGAACATATCGAACGCAAACTGATGGCAGGCGAGAAGTTGAGAAATATCGGCGTCTGA", + "dna_sequence_length": 1419, + "functions": [ + "arabinose transporter" + ], + "id": "CDS_2801", + "location": [ + [ + "NC_000913", + 2982182, + "-", + 1419 + ] + ], + "md5": "b53191ff5a443c7e6bca5ec1af3abbcc", + "parent_gene": "", + "protein_md5": "4ca9c137e2fb78d8fa4a7902275e4e0a", + "protein_translation": "MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETKNVTLEHIERKLMAGEKLRNIGV", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009330" + ], + [ + "gene_synonym", + "ECK2840" + ], + [ + "gene_synonym", + "EcoGene:EG12361" + ], + [ + "gene_synonym", + "GI:16130746" + ], + [ + "gene_synonym", + "GeneID:947323" + ], + [ + "gene_synonym", + "JW2810" + ], + [ + "gene_synonym", + "NP_417319.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37769" + ], + [ + "gene_synonym", + "b2842" + ], + [ + "gene_synonym", + "kduD" + ], + [ + "gene_synonym", + "ygeC" + ], + [ + "gene_synonym", + "yqeD" + ] + ], + "dna_sequence": "ATGATTTTAAGTGCATTTTCTCTCGAAGGTAAAGTTGCGGTCGTCACTGGTTGTGATACTGGACTGGGTCAGGGGATGGCGTTGGGGCTGGCGCAAGCGGGCTGTGACATTGTTGGCATTAACATCGTTGAACCGACTGAAACCATCGAGCAGGTCACAGCGCTGGGGCGTCGTTTTTTAAGCCTGACCGCCGATCTGCGAAAGATTGATGGTATTCCAGCACTGCTGGATCGCGCGGTAGCGGAGTTTGGTCATATTGATATCCTGGTGAATAACGCCGGATTGATTCGCCGCGAAGATGCTCTCGAGTTCAGCGAAAAGGACTGGGACGATGTCATGAACCTGAATATCAAGAGCGTATTCTTCATGTCTCAGGCAGCGGCGAAACACTTTATCGCGCAAGGCAATGGCGGCAAGATTATCAATATCGCGTCAATGCTCTCCTTCCAGGGCGGGATCCGTGTGCCTTCTTATACCGCATCAAAAAGCGGCGTGATGGGTGTGACGCGATTGATGGCGAACGAATGGGCTAAACACAACATTAATGTTAATGCGATAGCCCCGGGTTACATGGCGACCAACAATACTCAACAACTACGGGCAGATGAACAACGTAGCGCGGAAATTCTCGACCGCATTCCAGCTGGTCGTTGGGGACTGCCGAGTGACCTGATGGGGCCGATAGTGTTCCTTGCCTCCAGCGCTTCAGATTATGTGAATGGTTATACCATTGCCGTGGATGGCGGTTGGCTGGCGCGTTAA", + "dna_sequence_length": 762, + "functions": [ + "2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase", + "KDG oxidoreductase", + "20-ketosteroid reductase" + ], + "id": "CDS_2802", + "location": [ + [ + "NC_000913", + 2983258, + "-", + 762 + ] + ], + "md5": "a34bb82c4945905949d6cacdfe61a47b", + "parent_gene": "", + "protein_md5": "c2394212a6c13b653747deb8690438ef", + "protein_translation": "MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009332" + ], + [ + "gene_synonym", + "ECK2841" + ], + [ + "gene_synonym", + "EcoGene:EG13096" + ], + [ + "gene_synonym", + "GI:16130747" + ], + [ + "gene_synonym", + "GeneID:947319" + ], + [ + "gene_synonym", + "JW2811" + ], + [ + "gene_synonym", + "NP_417320.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46938" + ], + [ + "gene_synonym", + "b2843" + ], + [ + "gene_synonym", + "kduI" + ], + [ + "gene_synonym", + "yqeE" + ] + ], + "dna_sequence": "GTGGACGTAAGACAGAGCATCCACAGTGCGCACGCAAAAACGCTGGATACCCAAGGGCTGCGCAATGAATTTTTGGTTGAAAAGGTATTTGTCGCCGATGAGTACACCATGGTTTACAGCCACATTGACCGAATTATTGTTGGCGGCATTATGCCGATAACTAAAACGGTTTCCGTTGGCGGGGAAGTTGGTAAACAACTCGGCGTAAGCTATTTCCTTGAACGTCGCGAGTTAGGTGTTATCAATATTGGCGGTGCCGGTACGATTACTGTCGATGGCCAATGCTATGAAATCGGTCACCGCGACGCCCTGTATGTTGGTAAAGGTGCAAAAGAAGTTGTCTTTGCCAGTATTGATACCGGCACTCCGGCGAAGTTTTATTACAATTGCGCACCCGCGCATACGACGTATCCCACCAAAAAAGTCACACCGGACGAAGTATCTCCAGTCACGTTAGGCGATAACCTCACCAGTAACCGTCGCACGATTAACAAATATTTTGTCCCGGATGTACTGGAAACCTGCCAATTGAGTATGGGGCTGACGGAGCTGGCTCCGGGTAACTTGTGGAACACCATGCCGTGTCACACCCACGAGCGCCGGATGGAAGTTTATTTCTATTTCAATATGGATGATGACGCCTGCGTTTTCCACATGATGGGGCAGCCGCAAGAAACGCGTCATATTGTGATGCATAACGAGCAGGCGGTGATCTCCCCGAGCTGGTCGATCCATTCCGGTGTCGGAACCAAAGCTTATACCTTTATCTGGGGCATGGTCGGTGAAAACCAGGTCTTTGATGATATGGACCATGTGGCCGTTAAAGATTTGCGCTAG", + "dna_sequence_length": 837, + "functions": [ + "hexuronate isomerase" + ], + "id": "CDS_2803", + "location": [ + [ + "NC_000913", + 2984124, + "-", + 837 + ] + ], + "md5": "8aad7f4e692528af9a6b5950bb6ca12b", + "parent_gene": "", + "protein_md5": "5353d578d66c769750eaa2c05b85ad44", + "protein_translation": "MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009335" + ], + [ + "gene_synonym", + "ECK2842" + ], + [ + "gene_synonym", + "EcoGene:EG13097" + ], + [ + "gene_synonym", + "GI:90111494" + ], + [ + "gene_synonym", + "GeneID:947324" + ], + [ + "gene_synonym", + "JW5453" + ], + [ + "gene_synonym", + "NP_417321.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46939" + ], + [ + "gene_synonym", + "b2844" + ], + [ + "gene_synonym", + "yqeF" + ] + ], + "dna_sequence": "ATGAAAGACGTTGTGATTGTCGGGGCGTTACGGACACCTATCGGCTGCTTTCGTGGTGCGTTAGCGGGTCATTCCGCCGTGGAACTTGGTAGTCTGGTCGTGAAAGCGTTAATAGAACGTACCGGCGTTCCTGCATATGCGGTGGATGAAGTAATTCTTGGTCAGGTGTTGACTGCAGGGGCAGGGCAGAATCCGGCAAGGCAATCGGCTATTAAAGGTGGTCTGCCTAATAGCGTTTCTGCAATCACTATTAATGACGTTTGCGGTTCCGGGCTTAAAGCACTGCATCTGGCTACTCAGGCGATACAGTGTGGCGAGGCTGATATTGTCATCGCCGGTGGCCAGGAAAACATGAGCCGCGCACCACATGTTCTGACTGATAGCCGCACCGGTGCACAGCTTGGCAATAGCCAGTTGGTTGACAGTCTTGTGCATGATGGGTTGTGGGATGCCTTCAATGATTATCATATTGGTGTCACCGCCGAAAATCTGGCTCGCGAATATGGCATCAGCCGTCAGTTGCAGGATGCTTACGCACTTAGCTCGCAACAAAAAGCGCGAGCGGCGATTGACGCCGGACGATTTAAAGATGAGATCGTCCCGGTAATGACCCAAAGTAACGGGCAGACGTTGGTTGTTGATACCGATGAACAGCCACGCACTGACGCCAGCGCAGAAGGCTTAGCCCGTTTAAATCCTTCATTTGATAGTCTCGGTTCTGTGACAGCGGGTAATGCATCATCCATAAACGATGGCGCAGCTGCGGTAATGATGATGAGCGAAGCCAAAGCACGAGCGTTGAATTTACCCGTGCTGGCCCGCATTCGCGCATTTGCCAGCGTTGGTGTAGATCCGGCATTGATGGGAATTGCGCCGGTGTATGCGACCCGCCGTTGCCTGGAGCGTGTAGGCTGGCAGTTGGCTGAAGTCGATCTTATCGAGGCTAATGAAGCGTTTGCTGCACAGGCGCTTTCGGTTGGCAAGATGCTTGAGTGGGATGAGCGTCGGGTCAATGTCAATGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGCGGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAG", + "dna_sequence_length": 1182, + "functions": [ + "short chain acyltransferase" + ], + "id": "CDS_2804", + "location": [ + [ + "NC_000913", + 2985592, + "-", + 1182 + ] + ], + "md5": "325f5c0fe271d358cd2e5f492f026880", + "parent_gene": "", + "protein_md5": "dfd8186b409f025f704cf5b8326bf306", + "protein_translation": "MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERDE", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009345" + ], + [ + "gene_synonym", + "ECK2843" + ], + [ + "gene_synonym", + "EcoGene:EG13098" + ], + [ + "gene_synonym", + "GI:16130749" + ], + [ + "gene_synonym", + "GeneID:945028" + ], + [ + "gene_synonym", + "JW2813" + ], + [ + "gene_synonym", + "NP_417322.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63340" + ], + [ + "gene_synonym", + "b2845" + ], + [ + "gene_synonym", + "yqeG" + ] + ], + "dna_sequence": "ATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACACTACTATGGCAAGAAGATTGGTAATCTGATTACCACGCTGTACTTCATCGCCTTTTTTGTCGTCGTGTTGATATATGCAGTGGCAATTACCAACTCACTTACGGAACAGCTGGCAAAGCATATGGTTATTGATCTTCGCATCCGTATGTTGGTGAGTCTGGGTGTTGTATTAATTCTGAATCTCATTTTTCTGATGGGACGTCATGCCACTATTCGGGTAATGGGATTTTTGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATAGACAGACGTGAAAAATATGGCGAACACGCTATGGATAAATGCAAAAAAATTATGAAAGTCGCTTATCTCATCATCTGCATAAGTGTACTGTTCTTTGTCTTTAGCTGCCTGCTTTCTATTCCACCTTCGTATATTGAAGCTGCTAAAGAAGAAGGGGTCACCATTTTATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGTTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGATGTCGAAATCATTCCTGGGTACGTACTTTGGCGTTATTGAAGGTGCCACAGAGGTCGTCAAAACAACACTACAGCAGGTTGGTGTAAAGAAAAGTCGTGCATTTAACCGCGCACTATCAATTATGTTGGTATCGCTGATTACCTTCATTGTTTGTTGCATTAACCCGAACGCGATTTCGATGATTTACGCGATCAGCGGCCCGCTCATTGCCATGATACTTTTCATCATGCCTACGCTGTCAACGTATCTCATCCCGGCGCTTAAACCCTGGCGTTCCATCGGAAATCTGATTACGCTGATCGTGGGTATCCTGTGCGTATCGGTAATGTTCTTTAGCTAA", + "dna_sequence_length": 1230, + "functions": [ + "putative transporter" + ], + "id": "CDS_2805", + "location": [ + [ + "NC_000913", + 2985847, + "+", + 1230 + ] + ], + "md5": "2c51a75ca31ccde41d46fd3b205c8bcb", + "parent_gene": "", + "protein_md5": "2e8772e4139a5c9333f3cfb4f88bd647", + "protein_translation": "MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS", + "protein_translation_length": 409, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009349" + ], + [ + "gene_synonym", + "ECK2844" + ], + [ + "gene_synonym", + "EcoGene:EG13099" + ], + [ + "gene_synonym", + "GI:90111495" + ], + [ + "gene_synonym", + "GeneID:945263" + ], + [ + "gene_synonym", + "JW5454" + ], + [ + "gene_synonym", + "NP_417323.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46941" + ], + [ + "gene_synonym", + "b2846" + ], + [ + "gene_synonym", + "yqeH" + ] + ], + "dna_sequence": "ATGGGGCTTTGTAGTCGTTATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTCAGTAAGTTTTTTACGTCTATTCCTTGAAAAAGACTGGATTGACTATCTTGCAAGTACTGACATGGGGATTGTTTTAGTCAGCGACCGCAATATGCAATCGTTAGCTAATTACTGGCGAAAACACAACTCAGCAATATCTGCTGTCATATATAATGATGATGGTCTTGATGTTGCCAATGAAAAGATCAGACAACTATTTATTGGTCGTTATTTATCATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGA", + "dna_sequence_length": 633, + "functions": [ + "putative LuxR family transcriptional regulator" + ], + "id": "CDS_2806", + "location": [ + [ + "NC_000913", + 2987536, + "+", + 633 + ] + ], + "md5": "9078ba1953b18167c5e69235a5128a9a", + "parent_gene": "", + "protein_md5": "d396e5a3ee8d4a3fda79e6efbf722c34", + "protein_translation": "MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009352" + ], + [ + "gene_synonym", + "ECK2845" + ], + [ + "gene_synonym", + "EcoGene:EG13100" + ], + [ + "gene_synonym", + "GI:16130751" + ], + [ + "gene_synonym", + "GeneID:947327" + ], + [ + "gene_synonym", + "JW2815" + ], + [ + "gene_synonym", + "NP_417324.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46942" + ], + [ + "gene_synonym", + "b2847" + ], + [ + "gene_synonym", + "yqeI" + ] + ], + "dna_sequence": "ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAACGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATAAAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGGATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAAACTGTTTAACCCTGTCTTACCGTGAGGTTAATCGTGATTGA", + "dna_sequence_length": 810, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_2807", + "location": [ + [ + "NC_000913", + 2988502, + "+", + 810 + ] + ], + "md5": "ca3bcea61a9a61a1c86a4c16b18fc5f0", + "parent_gene": "", + "protein_md5": "48f6c995576b4b9606bc8f6faa743c95", + "protein_translation": "MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIMLSAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVANCLTLSYREVNRD", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009354" + ], + [ + "gene_synonym", + "ECK2846" + ], + [ + "gene_synonym", + "EcoGene:EG13101" + ], + [ + "gene_synonym", + "GI:90111496" + ], + [ + "gene_synonym", + "GeneID:947328" + ], + [ + "gene_synonym", + "JW5455" + ], + [ + "gene_synonym", + "NP_417325.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46943" + ], + [ + "gene_synonym", + "b2848" + ], + [ + "gene_synonym", + "yqeJ" + ] + ], + "dna_sequence": "GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAAGTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTGTAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGGTAA", + "dna_sequence_length": 483, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2808", + "location": [ + [ + "NC_000913", + 2989304, + "+", + 483 + ] + ], + "md5": "e47f6020f992acd879a219387fa3ed7e", + "parent_gene": "", + "protein_md5": "4e43668734e105de99887301275df018", + "protein_translation": "MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4498" + ], + [ + "gene_synonym", + "EcoGene:EG14488" + ], + [ + "gene_synonym", + "GI:226524744" + ], + [ + "gene_synonym", + "GeneID:7751637" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P613" + ], + [ + "gene_synonym", + "YP_002791253.1" + ], + [ + "gene_synonym", + "b4683" + ], + [ + "gene_synonym", + "yqeL" + ] + ], + "dna_sequence": "ATGAAAGATGTTGATCAAATCTTTGATGCTTTAGACTGCCATATACTGCGAGAATATTTAATTTTATTGTTTTATGATTAA", + "dna_sequence_length": 81, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2809", + "location": [ + [ + "NC_000913", + 2989899, + "-", + 81 + ] + ], + "md5": "dda1b68095d2611447029069a932746a", + "parent_gene": "", + "protein_md5": "fb4a01df4a2f6b52fa1306fda85f2882", + "protein_translation": "MKDVDQIFDALDCHILREYLILLFYD", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009356" + ], + [ + "gene_synonym", + "ECK2847" + ], + [ + "gene_synonym", + "EcoGene:EG13274" + ], + [ + "gene_synonym", + "GI:90111497" + ], + [ + "gene_synonym", + "GeneID:947329" + ], + [ + "gene_synonym", + "JW2817" + ], + [ + "gene_synonym", + "NP_417326.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77136" + ], + [ + "gene_synonym", + "b2849" + ], + [ + "gene_synonym", + "yqeK" + ] + ], + "dna_sequence": "ATGGACATTGAATTTTCGCAGATTCATGAAATGGTCTATATGCATGATATTGTAAATTCGGACTCGAAAAAGAAACCAAGGATTCCGTTAAAAAAATTCCTTAATGCTGAGAATGTTCTCACGCAAACAACATCATGGACATTAAATTCAAGATATGTGAATGTTAATTCTGTCAATAAAGTCAACGTAAAGAGTAAAGTTAAAAACAGTTATATCTCACGATCTGTCAATGATGAGTTTAGTTTAACAGATGATGAAATCAATTCTTTTAAAGAAACGTTAGTCCTTTCCTCTATTGATTCACTGAGTAAACTGGTTCTTAATAATCCTCTTTCTGTATTGTTTACATCGACTGTACGAAGGAATAATAATCGAGCTAAGATGAATGTCGAGTTCGACTCATGGATTTGCACCAGATGTTGTTGA", + "dna_sequence_length": 426, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2810", + "location": [ + [ + "NC_000913", + 2990360, + "-", + 426 + ] + ], + "md5": "6e5eeab74e5dd267548d2a6a15b87464", + "parent_gene": "", + "protein_md5": "bffebb6783c3db160caa845dc1733a29", + "protein_translation": "MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAENVLTQTTSWTLNSRYVNVNSVNKVNVKSKVKNSYISRSVNDEFSLTDDEINSFKETLVLSSIDSLSKLVLNNPLSVLFTSTVRRNNNRAKMNVEFDSWICTRCC", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009361" + ], + [ + "gene_synonym", + "ECK2848" + ], + [ + "gene_synonym", + "EcoGene:EG13036" + ], + [ + "gene_synonym", + "GeneID:946823" + ], + [ + "gene_synonym", + "JW2818" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46786" + ], + [ + "gene_synonym", + "b2850" + ], + [ + "gene_synonym", + "ygeF" + ] + ], + "dna_sequence": "ATGAAGCCACGAAATATTAATAATAGCCTACCACTGCAACCATTAGTTCCTGATCAGGAGAACAAAAATAAGAAAAATGAAGAGAAATCCGTTAATCCAGTTAAAATCACAATGGGGTCTGGTTTAAATTATATTGAACAAGAATCTCTTGGAGGAAAATATCTAACACATGATTTGTCAATAAAGATAGCGGATATTTCTGAAGAGATAATTCAGCAAGCAATATTATCTGCTATGAGCATATATAAATTTTCGATAACAGATGATTTAATGAGTATGGCTGTAAATGAACTCATAAAACTGACCAAAATAGAGAATAATGTAGACCTGAATAAATTCACTACTATATGCACAGACGTTCTATCCCCCCGCGTCACCAGACATAATAAAGAAAAAAAAACAAACGACATTCTACCCTTCTCAAAAATCCCCTTTTTAATTTTCATTGAAAAAATGGCAATTGATACTATGAATCCAGGTCATACACATTAA", + "dna_sequence_length": 492, + "id": "CDS_2811", + "location": [ + [ + "NC_000913", + 2990554, + "+", + 396 + ], + [ + "NC_000913", + 2990948, + "+", + 96 + ] + ], + "md5": "597db7cf7e979991510a1414df170d29", + "parent_gene": "", + "protein_md5": "dba1fab0a2c0e8aa60c3b7307e4f4403", + "protein_translation": "MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKKTNDILPFSKIPFLIFIEKMAIDTMNPGHTH", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009364" + ], + [ + "gene_synonym", + "ECK2849" + ], + [ + "gene_synonym", + "EcoGene:EG13037" + ], + [ + "gene_synonym", + "GI:16130755" + ], + [ + "gene_synonym", + "GeneID:946986" + ], + [ + "gene_synonym", + "JW2819" + ], + [ + "gene_synonym", + "NP_417328.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46787" + ], + [ + "gene_synonym", + "b2851" + ], + [ + "gene_synonym", + "ygeG" + ] + ], + "dna_sequence": "ATGAGCACAGAAACAATTGAAATATTCAATAATAGTGATGAATGGGCAAATCAACTAAAACACGCATTATCGAAAGGAGAAAATCTGGCATTACTACATGGTTTAACTCCTGATATCCTTGATAGAATATATGCATATGCATTCGACTACCATGAAAAGGGTAATATAACGGACGCAGAAATTTATTATAAATTCTTGTGCATTTATGCGTTCGAAAATCATGAGTATCTAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAA", + "dna_sequence_length": 492, + "functions": [ + "SycD-like chaperone family TPR-repeat-containing protein" + ], + "id": "CDS_2812", + "location": [ + [ + "NC_000913", + 2991268, + "+", + 492 + ] + ], + "md5": "90678672da3447583759442e49167d65", + "parent_gene": "", + "protein_md5": "5444ce373fc6777ca03ce5bbf90ff67e", + "protein_translation": "MSTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSEDNG", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009368" + ], + [ + "gene_synonym", + "ECK2850" + ], + [ + "gene_synonym", + "EcoGene:EG13038" + ], + [ + "gene_synonym", + "GI:16130756" + ], + [ + "gene_synonym", + "GeneID:946265" + ], + [ + "gene_synonym", + "JW2820" + ], + [ + "gene_synonym", + "NP_417329.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76639" + ], + [ + "gene_synonym", + "b2852" + ], + [ + "gene_synonym", + "ygeH" + ] + ], + "dna_sequence": "ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAATGAGCAAGTTTATATTCCACAGAAAGAGTTAGGTGTATTAATAGTATTACTTGAATCCGCTGGTCATGTTGTACTGAAAGATATGATCATCGAATCAGTATGGAAAAATATTATTGTTAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGCATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAAAGTGAACTTGAACTTGCTGCTCAAAAAGCATTAGAGCTTTTAGATTATGTATCAGACATAACCACTGTCGATGGAAAAATTTTAGCTATTATGGGACTGATAACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACTCAACTGATATAGCCTCTCTCTACTACTATAGGGCACTAGTCCACTTTCATAATGAAAAAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAACTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAATGTGTAGATATGTATGTGCCTAACCCGCTCAAAAACAACATTAAACTCTACTATAAAGAAACTGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAA", + "dna_sequence_length": 1377, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_2813", + "location": [ + [ + "NC_000913", + 2992094, + "+", + 1377 + ] + ], + "md5": "26ef2c938b425ee151ec19cb22113879", + "parent_gene": "", + "protein_md5": "e5b5132bfd7ea787caed50bf339e3705", + "protein_translation": "MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR", + "protein_translation_length": 458, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009374" + ], + [ + "gene_synonym", + "ECK2851" + ], + [ + "gene_synonym", + "EcoGene:EG13039" + ], + [ + "gene_synonym", + "GI:16130757" + ], + [ + "gene_synonym", + "GeneID:947336" + ], + [ + "gene_synonym", + "JW5456" + ], + [ + "gene_synonym", + "NP_417330.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46789" + ], + [ + "gene_synonym", + "b2853" + ], + [ + "gene_synonym", + "ygeI" + ] + ], + "dna_sequence": "ATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAATCCTATCTCACCTTACTATAAAATTGAGTGGTAG", + "dna_sequence_length": 219, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2814", + "location": [ + [ + "NC_000913", + 2993638, + "+", + 219 + ] + ], + "md5": "c1382383e4eeb0ab55fabb9f64f274ff", + "parent_gene": "", + "protein_md5": "a4fdacca19ee12edecc3429bc0ecbfcf", + "protein_translation": "MTNPIGINNLSQSSNIANATGDEVVSLDKHINTSATDTDQIQAFIVSTWMAPFQNDMYSEDNPISPYYKIEW", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009377" + ], + [ + "gene_synonym", + "ECK2852" + ], + [ + "gene_synonym", + "EcoGene:EG13040" + ], + [ + "gene_synonym", + "GeneID:947338" + ], + [ + "gene_synonym", + "JW5457" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46790" + ], + [ + "gene_synonym", + "b2854" + ], + [ + "gene_synonym", + "pbl" + ], + [ + "gene_synonym", + "ygeJ" + ] + ], + "dna_sequence": "ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGTTTTGTATATTTATTACAAAAATGTCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAAATATATATTGTATATACCAGGCTTAATGAACTAGACAATCGTAAGGCTTCAGCAAAATGA", + "dna_sequence_length": 504, + "id": "CDS_2815", + "location": [ + [ + "NC_000913", + 2993939, + "+", + 444 + ], + [ + "NC_000913", + 2994382, + "+", + 60 + ] + ], + "md5": "cb28b91f59f7e6182db3c319ff257046", + "parent_gene": "", + "protein_md5": "d9f5c62f097db7a81b493c31858bbfc3", + "protein_translation": "MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKIYIVYTRLNELDNRKASAK", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009379" + ], + [ + "gene_synonym", + "ASAP:ABE-0009381" + ], + [ + "gene_synonym", + "ECK2853" + ], + [ + "gene_synonym", + "EcoGene:EG13041" + ], + [ + "gene_synonym", + "GeneID:947332" + ], + [ + "gene_synonym", + "JW5458" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46791" + ], + [ + "gene_synonym", + "b2856" + ], + [ + "gene_synonym", + "ygeK" + ], + [ + "gene_synonym", + "ygeL" + ] + ], + "dna_sequence": "ATGGGAAAAATTAAAATTGTAGTTTCAGATCAGCAGCCGTTTATGATTGATGGGATAATTGGATTTCTCGGACATTATCCTGATTTATATGAGGTTGTTGGGGGCTATAAAGATCTGAAGAAAGCTATAGCGGAGTGTAACAAATCTACAGCCTAAATATTTATTTTAGGAGAATTTGCAGGTGGAATGATGGGGGCCGAACTCGTAAAATGGGTTAAATCGCATAAGATAGATGCTCATATTATTACATTTGTAGCAAAGATGCCGTATATTGATTCAATAAAATTGCTTGAAGCAGGTGCGAAAGGATGCGTATGGAAAACCAGTCACCCGGCGAAACTAAATCGTGCTATTGATTCGATTAGTAATGGTTACACTTATTTTGATAGTGTACATATGGATTGTGAAAAAATATCTTCCAGGTATTCCTCTGATAATCAACTTACAAATCGTGAGTCAGAAATATTACAACTCATAGCTGATGGTAAAACAAACAAAGAAATCGCTAATTTCTTGCAGTTAAGCAGGAAAACAGTCGAAACTCATAGACTCAATATCATGAAGAAATTAGATGTTCACAGTGGTATCGAGTTGATCAAAACAGCTTTACGTATGGGTGTTTGCACTATATAA", + "dna_sequence_length": 633, + "id": "CDS_2816", + "location": [ + [ + "NC_000913", + 2995092, + "-", + 633 + ] + ], + "md5": "dc0b03849976b4615b95bc8bd6778299", + "parent_gene": "", + "protein_md5": "a8df795a14d00ed190e7b236aa804d13", + "protein_translation": "MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTA", + "protein_translation_length": 51, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009385" + ], + [ + "gene_synonym", + "ASAP:ABE-0009387" + ], + [ + "gene_synonym", + "ECK2855" + ], + [ + "gene_synonym", + "EcoGene:EG13044" + ], + [ + "gene_synonym", + "GeneID:2847705" + ], + [ + "gene_synonym", + "JW5459" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46793" + ], + [ + "gene_synonym", + "b2858" + ], + [ + "gene_synonym", + "ygeM" + ], + [ + "gene_synonym", + "ygeN" + ] + ], + "dna_sequence": "ATGCGAAAAAAAATAGAGATGAGCTTGATAAAATCTCCTGCAAATGGTGTTGTGATTAAAAGAAAAATTTCTGATGGATTGAAAGAAATAGTTTCTCTTAAAGAAAAAATCCTTCTTGAAACCACCGCAAAAATTCAGAGTATTGAGGAAAAGAGAGAAGAAAAATTTATTCAAGGTTATTATGATGGCTATACAAAAGGCATTATTGATGAGATGGATAATTTTATACCCTTGATAAGCTTGCTATGCTCAGAACTTGAAAAAAAAAGAATAAACATGATAAACGATCTGAAGAGTATATTGTTAAAACCTTCAGAAGAAGTTGATGTTTTTATCAAAATTTTTGAAAGTTGGGTAACAAAATTACCATCAATATCAGGTCCTGTAAATCTCCATATACCTACCAGTTTCAAAGATAAGTCTCTTGAAGTAGAGTCATATTTTGTCGACAAATCAATATGGAATGTCCATATTACATTTCATGATGATAAGCGTTTTGTGTTTTTTACCGATCAATTTATTGCTGAATTTAGTCCGCAGGAATTTGTGGATAATTGTGAGCAATATTTAATTAATAATCATTGTTTCTCCCCTGACAAGGTTAACGAAATCTGCGAACAAGCCAGACATTATTTAGTTGAAAAAATGTTTGAAACACATTCTTTGGATATGAATAATTCTGTTTTGGCAAGCCCTGAGGACTTATAG", + "dna_sequence_length": 708, + "id": "CDS_2817", + "location": [ + [ + "NC_000913", + 2996020, + "-", + 261 + ], + [ + "NC_000913", + 2995760, + "-", + 447 + ] + ], + "md5": "082ed0374c2956dddfc50c2b38d13dd1", + "parent_gene": "", + "protein_md5": "54ce3f8c9af82c646e2c9137a7dc0e15", + "protein_translation": "MRKKIEMSLIKSPANGVVIKRKISDGLKEIVSLKEKILLETTAKIQSIEEKREEKFIQGYYDGYTKGIIDEMDNFIPLISLLCSELEKKRINMINDLKSILLKPSEEVDVFIKIFESWVTKLPSISGPVNLHIPTSFKDKSLEVESYFVDKSIWNVHITFHDDKRFVFFTDQFIAEFSPQEFVDNCEQYLINNHCFSPDKVNEICEQARHYLVEKMFETHSLDMNNSVLASPEDL", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009390" + ], + [ + "gene_synonym", + "ECK2857" + ], + [ + "gene_synonym", + "EcoGene:EG13045" + ], + [ + "gene_synonym", + "GeneID:947325" + ], + [ + "gene_synonym", + "JW5846" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46795" + ], + [ + "gene_synonym", + "b2859" + ], + [ + "gene_synonym", + "ygeO" + ] + ], + "dna_sequence": "ATAAACAATTGGAATTTACTTCCATTGATCTGTTTACTCAGTGGTTGTCACTTTTATCGAGAAAGGTTTGCAGAACGCGGGTTTTTTTATAAGGTTCCTGATGTACTAAGGGATTATTTATCAGCTATACCGCTGGAAATAAATGAAAAGGCACGATACAAACCCGGCATCGCTAACTATCACAATATCATCACATGTGGTTTTTCAACGTTGTTACCCTATATAAGGCAACAACCATTGGCAATGCAGCAACGATTTAATTTATTATTTCCTGATTTTGTTGACCACATACAATCGCCGTTACCACTTGCATCAACACTTTTAGAGAGAATTACATTTTATGCGAAAAAAAATAGAGATGAGCTTGATAAAATCTCCTGCAAATGGTGTTGTGATTAA", + "dna_sequence_length": 399, + "id": "CDS_2818", + "location": [ + [ + "NC_000913", + 2996360, + "-", + 399 + ] + ], + "md5": "2249a911deedd913d6e0e3935385278a", + "parent_gene": "", + "protein_md5": "9ca04de566e83246e2ef3926755124b0", + "protein_translation": "INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYHNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRDELDKISCKWCCD", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009395" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16130763" + ], + [ + "gene_synonym", + "GeneID:947346" + ], + [ + "gene_synonym", + "NP_417337.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF56" + ], + [ + "gene_synonym", + "b2860" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_2819", + "location": [ + [ + "NC_000913", + 2997277, + "-", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009397" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698306" + ], + [ + "gene_synonym", + "GeneID:947347" + ], + [ + "gene_synonym", + "NP_417338.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF43" + ], + [ + "gene_synonym", + "b2861" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_2820", + "location": [ + [ + "NC_000913", + 2997600, + "-", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009399" + ], + [ + "gene_synonym", + "ASAP:ABE-0009401" + ], + [ + "gene_synonym", + "ECK2858" + ], + [ + "gene_synonym", + "EcoGene:EG13047" + ], + [ + "gene_synonym", + "GeneID:947344" + ], + [ + "gene_synonym", + "JW2831" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46797" + ], + [ + "gene_synonym", + "b2863" + ], + [ + "gene_synonym", + "ygeP" + ], + [ + "gene_synonym", + "ygeQ" + ] + ], + "dna_sequence": "ATGAAAGGGAAATCTGCATTAACTCTTCTGCTCGCTGGTATATTTTCGTGCGGCACATGCCAGGCGACAGGGGCAGAAGTGACGAGTGAATCTGTATTTAACATTCTTAATTCCACGGGGGCAGCAACAGATAAAAGTTATTTATCGTTAAATCCAGATAAGTATCCTAATTATCGTCTTCTGATTCACTCAGCCAAATTACAAAATGAAATAAAGAGCCACTATACCAAAGACGAAATTCAAGGATTGCTAACATTAACAGAAAACACACGAAAGTTAACGTTGACGGAGAAACCCTGGGGAACGTTTATTCTTGCTTCTACTTTCGAAGATGACAAAACAGCGGCAGAAACCCACTATGATGCTGTCTGGTTGAGGGATAGTTTATGGGGCTATATGGCATTAGTATCAGATCAGGGAAATAGTGTAGCCGCAAAAAAGGTTCTGCTCACCCTGTGGGATTATATGTCTACGCCCGACCAGATTAAGCGGATGCAGGACGTCATTAGCAACCCAAAACGACTGGATGGAATTCCCGTGCAAATGAATGCTGTGCATATCCGATTTGACAGCAACTCCCCCGTGATGGCAGATGTGCAGGAAGAAGGCAAGCCGCAGCTGTGGAACCATAAACAAAATGATGCTTTAGGTCTTTACCTTGATCTCCTTATACAAGCAATCAACACTGGTACTATTAACGCTGAAGATTGGCAAAAAGGTGACCGATTAAAGTCGGTTGCGCTGCTGATTGCTTATCTGGATAAAGCCAATTTCTATGTTATGGAAGATTCCTGAGCATGGGAAGAAGATGCCCGATTAAACACATCTTCCGTTGCACTGGTGACCTCTGGACTGGAACGTTTGTCAAACCTACTCTCGAAGAAAGACTCTGTTTTTGTCTCTGATTTACTACGCGAAGCTAAAGTCAATGAACTGGATGAAACTCTTTCAACAACGAGGTTGAACCACCTCATAGATAAAGGTTATGAAAGAATAACGTTACAGCTTGATTTAGGGGGAGAATCCCCAGGTTATCTGGAAAAAGATAAACATTACAGAGAAGCCGATGCGGCTTTACTTAATGTTATTTATCCTACAAATCTTTCAAAGATAAACACCAGAAGAAAAGAGCAAGTT", + "dna_sequence_length": 1137, + "id": "CDS_2821", + "location": [ + [ + "NC_000913", + 2998828, + "-", + 1137 + ] + ], + "md5": "139b7e2497cd2a960fe795373ca61f8d", + "parent_gene": "", + "protein_md5": "4804f0b3ded704682c51bd760cdfddd9", + "protein_translation": "MKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009407" + ], + [ + "gene_synonym", + "ECK2861" + ], + [ + "gene_synonym", + "EcoGene:EG13048" + ], + [ + "gene_synonym", + "GI:90111503" + ], + [ + "gene_synonym", + "GeneID:947352" + ], + [ + "gene_synonym", + "JW2833" + ], + [ + "gene_synonym", + "NP_417341.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46798" + ], + [ + "gene_synonym", + "b2865" + ], + [ + "gene_synonym", + "ygeR" + ] + ], + "dna_sequence": "TTGAGTGCGGGACGCCTGAATAAAAAATCTCTGGGTATCGTGATGTTGTTATCGGTTGGACTGCTTTTGGCGGGCTGTTCGGGTAGCAAATCATCCGATACAGGAACGTATTCCGGCTCCGTTTACACCGTGAAACGGGGGGATACGCTATATCGTATTTCGCGCACCACGGGAACCAGCGTAAAAGAACTGGCGCGACTGAACGGCATTTCCCCCCCTTACACCATTGAAGTTGGTCAGAAACTAAAACTGGGTGGGGCGAAAAGTAGCAGTATTACACGTAAATCAACCGCCAAATCAACGACCAAAACCGCATCGGTTACACCGTCATCAGCGGTACCGAAATCATCCTGGCCGCCAGTAGGGCAACGTTGTTGGTTATGGCCAACGACAGGGAAAGTTATCATGCCGTATTCGACAGCAGATGGCGGCAATAAAGGGATTGATATCTCAGCTCCACGGGGTACACCTATTTACGCCGCGGGTGCAGGAAAGGTGGTGTATGTGGGCAACCAGCTGCGTGGCTACGGTAATCTCATCATGATTAAACACAGTGAAGATTACATTACGGCTTACGCCCATAATGACACGATGCTGGTAAATAATGGGCAAAGCGTGAAGGCTGGGCAAAAAATCGCCACTATGGGGAGCACGGATGCGGCATCTGTTCGCCTGCATTTCCAGATTCGTTACCGTGCAACGGCAATTGATCCGCTACGTTACTTGCCGCCTCAGGGCAGCAAGCCAAAATGCTGA", + "dna_sequence_length": 756, + "functions": [ + "LysM domain-containing M23 family putative peptidase", + "septation lipoprotein" + ], + "id": "CDS_2822", + "location": [ + [ + "NC_000913", + 2999891, + "-", + 756 + ] + ], + "md5": "de392534ff6851bbb34f98a87a78d1cb", + "parent_gene": "", + "protein_md5": "c726ec67c36951182f6246062b3fdb50", + "protein_translation": "MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSITRKSTAKSTTKTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009413" + ], + [ + "gene_synonym", + "ECK2862" + ], + [ + "gene_synonym", + "EcoGene:EG13049" + ], + [ + "gene_synonym", + "GI:16130768" + ], + [ + "gene_synonym", + "GeneID:947116" + ], + [ + "gene_synonym", + "JW5462" + ], + [ + "gene_synonym", + "NP_417342.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46799" + ], + [ + "gene_synonym", + "b2866" + ], + [ + "gene_synonym", + "xdhA" + ], + [ + "gene_synonym", + "ygeS" + ] + ], + "dna_sequence": "ATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATGCCGTAAGTATTAATGATGAACAAGCCAGAAGTTTGCCGGGCGTACTGGCGATTTTTACCTGGGAAGATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGGCCCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAATTTACTGAAACAAAGCACGATGTCGACGGGTAATGTCCAACAAACAATCGATGCCGCCGACTACCAGGTACAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGTTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTTCCCTTAGCCGTGAAGAGTGTTTCCTCGCAACCCGTACCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGTTATGGCGCGCCACAAGTCGTATTTGCCGTTGAGTCTATGCTTGATGACGCCGCGACAGCGTTAGGTATTGATCCTGTTGAAATTCGTTTACGCAACGCCGCCCGCGAAGGAGATGCTAATCCGCTCACGGGCAAACGTATTTACAGCGCAGGGTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGGCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGCTACATCAGTCAGCGATGAATCTGACCCTGATAAAAGGCCATATCGTGCTGGTTGAACGACCGGAAGAGCCGTTAATGTCGTTAAAAGATTTGGCGATGGACGCTTTCTACCACCCTGAACGCGGCGGGCAGCTCTCTGCTGAAAGCTCCATCAAAACCACCACTAACCCACCGGCGTTTGGCTGTACCTTTGTTGATCTGACGGTCGATATTGCGCTGTGCAAAGTCACCATCAACCGCATCCTCAACGTTCATGATTCAGGGCATATTCTTAATCCACTGCTGGCAGAAGGTCAGGTACACGGCGGAATGGGAATGGGCATTGGCTGGGCGCTATTTGAAGAGATGATCATCGATGCTAAAAGCGGCGTGGTCCGTAACCCCAATCTGCTGGATTACAAAATGCCGACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGGTGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGA", + "dna_sequence_length": 2259, + "functions": [ + "xanthine dehydrogenase, molybdenum binding subunit" + ], + "id": "CDS_2823", + "location": [ + [ + "NC_000913", + 3000345, + "+", + 2259 + ] + ], + "md5": "f381727c31a4939ad3bf7cc38419fa12", + "parent_gene": "", + "protein_md5": "4d5592d0f9c871026a5a07b6b7a516fa", + "protein_translation": "MRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGNLLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEFHLAGLI", + "protein_translation_length": 752, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009416" + ], + [ + "gene_synonym", + "ECK2863" + ], + [ + "gene_synonym", + "EcoGene:EG13050" + ], + [ + "gene_synonym", + "GI:16130769" + ], + [ + "gene_synonym", + "GeneID:947205" + ], + [ + "gene_synonym", + "JW2835" + ], + [ + "gene_synonym", + "NP_417343.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46800" + ], + [ + "gene_synonym", + "b2867" + ], + [ + "gene_synonym", + "xdhB" + ], + [ + "gene_synonym", + "ygeT" + ] + ], + "dna_sequence": "ATGTTTGATTTTGCTTCTTACCATCGCGCAGCAACCCTTGCCGATGCCATCAACCTGCTGGCTGACAACCCGCAGGCCAAACTGCTCGCCGGTGGCACTGACGTACTGATTCAGCTCCACCATCACAATGACCGTTATCGCCATATTGTTGATATTCATAATCTGGCGGAGCTGCGGGGAATTACGCTGGCGGAAGATGGCTCGCTACGTATCGGCTCTGCAACGACATTTACCCAGCTAATAGAAGATCCTATAACTCAACGTCATCTCCCGGCGTTATGTGCTGCGGCCACGTCCATTGCTGGACCGCAGATCCGTAACGTCGCTACCTACGGTGGAAATATTTGCAACGGTGCCACCAGCGCAGATTCTGCCACGCCAACGCTAATTTATGACGCGAAACTGGAGATCCACTCCCCGCGCGGTGTTCGTTTCGTCCCGATTAATGGCTTTCACACCGGGCCGGGCAAAGTGTCTCTTGAGCATGACGAAATCCTCGTCGCCTTTCATTTTCCGCCACAGCCGAAAGAACACGCGGGCAGCGCGCATTTTAAATATGCCATGCGCGACGCAATGGATATTTCAACGATTGGCTGCGCCGCACATTGCCGACTGGATAACGGCAATTTCAGCGAATTACGCCTGGCATTTGGTGTTGCCGCGCCAACGCCGATTCGCTGCCAACATGCCGAACAGACTGCACAAAATGCGCCATTAAACCTGCAAACGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCCGCGGCGGGGGGAAAATTGCAATGA", + "dna_sequence_length": 879, + "functions": [ + "xanthine dehydrogenase, FAD-binding subunit" + ], + "id": "CDS_2824", + "location": [ + [ + "NC_000913", + 3002614, + "+", + 879 + ] + ], + "md5": "e71ac59fd1ad7e0d0fc40d46236aa2b2", + "parent_gene": "", + "protein_md5": "6528f59616cd448ec93bb8144736b039", + "protein_translation": "MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAGPQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTKKVISEAVAAAGGKLQ", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009418" + ], + [ + "gene_synonym", + "ECK2864" + ], + [ + "gene_synonym", + "EcoGene:EG13051" + ], + [ + "gene_synonym", + "GI:16130770" + ], + [ + "gene_synonym", + "GeneID:945148" + ], + [ + "gene_synonym", + "JW2836" + ], + [ + "gene_synonym", + "NP_417344.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46801" + ], + [ + "gene_synonym", + "b2868" + ], + [ + "gene_synonym", + "xdhC" + ], + [ + "gene_synonym", + "ygeU" + ] + ], + "dna_sequence": "ATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCACCAGGCACGCCGCTCTCGGAATTACTCCGCGAACAAGGACTGCTAAGTGTCAAACAAGGGTGCTGCGTGGGTGAATGTGGTGCCTGTACGGTGTTGGTCGACGGCACAGCAATAGACAGTTGCTTATACCTTGCCGCCTGGGCTGAAGGAAAAGAGATCCGCACGCTGGAAGGTGAAGCGAAAGGCGGAAAACTTTCTCATGTTCAGCAGGCTTATGCGAAATCCGGCGCAGTGCAGTGCGGGTTTTGTACGCCTGGCCTGATTATGGCTACCACGGCAATGCTGGCGAAACCACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAA", + "dna_sequence_length": 480, + "functions": [ + "xanthine dehydrogenase, Fe-S binding subunit" + ], + "id": "CDS_2825", + "location": [ + [ + "NC_000913", + 3003489, + "+", + 480 + ] + ], + "md5": "508fd45e284a5ce8fbfffa9f19bc3269", + "parent_gene": "", + "protein_md5": "da56fd2cd0e2aaf487fb52906eeb8498", + "protein_translation": "MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009420" + ], + [ + "gene_synonym", + "ECK2865" + ], + [ + "gene_synonym", + "EcoGene:EG13052" + ], + [ + "gene_synonym", + "GI:16130771" + ], + [ + "gene_synonym", + "GeneID:947320" + ], + [ + "gene_synonym", + "JW2837" + ], + [ + "gene_synonym", + "NP_417345.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46802" + ], + [ + "gene_synonym", + "b2869" + ], + [ + "gene_synonym", + "ygeV" + ] + ], + "dna_sequence": "ATGGAGCTTGCTACTACGCAGTCAGTATTGATGCAAATTCAACCGACAATTCAGCGTTTTGCCAGAATGCTTGCCAGCGTTTTGCAGCTTGAGGTTGAGATCGTTGATGAAAACTTGTGTCGCGTTGCCGGAACGGGCGCGTATGGGAAGTTTCTTGGTCGCCAGTTGAGCGGCAACTCACGCCTGCTCCGCCACGTCCTGGAAACGAAAACTGAAAAAGTTGTGACACAGTCTCGCTTCGATCCCCTTTGCGAAGGTTGCGATAGTAAAGAAAATTGCCGCGAAAAAGCATTTCTGGGTACGCCTGTCATTTTACAGGATCGTTGTGTTGGGGTGATAAGTTTGATTGCCGTTACCCACGAGCAACAAGAGCATATCAGTGATAATTTACGCGAATTTTCTGATTATGTTCGCCATATATCCACCATTTTTGTTTCGAAACTTCTGGAGGATCAGGGGCCAGGAGATAACATCAGTAAAATATTTGCGACCATGATCGATAATATGGATCAGGGCGTATTAGTTGTAGATGATGAAAATCGGGTTCAGTTTGTTAATCAGACTGCCTTAAAAACACTTGGTGTTGTGCAAAATAATATTATTGGGAAACCTATCCGTTTCAGACCATTAACATTTGAGAGTAATTTTACCCATGGACATATGCAGCATATTGTTTCATGGGACGATAAAAGTGAATTAATCATTGGTCAATTGCATAACATTCAGGGCCGACAATTATTTTTAATGGCGTTTCACCAATCGCATACCAGTTTTTCTGTAGCAAATGCACCTGATGAACCGCATATTGAACAATTGGTTGGCGAGTGCCGTGTTATGCGGCAATTAAAACGACTCATTAGCCGTATTGCACCCAGCCCATCCAGCGTTATGGTGGTTGGTGAAAGCGGCACGGGTAAAGAAGTCGTCGCCCGTGCAATCCATAAGTTGAGCGGAAGACGGAATAAACCCTTTATTGCTATCAACTGTGCCGCGATTCCGGAGCAGCTTCTGGAGAGCGAACTGTTCGGTTATGTTAAAGGTGCATTTACTGGCGCTTCTGCCAACGGTAAAACAGGGTTGATTCAGGCGGCGAATACGGGCACGCTGTTTCTCGATGAAATAGGTGATATGCCATTAATGTTGCAGGCTAAATTACTGCGCGCTATTGAGGCACGTGAAATTCTGCCGATTGGTGCCAGTAGCCCAATACAAGTCGACATTCGCATCATTTCTGCAACTAATCAGAATTTGGCCCAGTTCATTGCCGAAGGTAAATTCCGCGAAGATCTCTTCTACCGACTTAATGTTATCCCGATAACTCTGCCACCGCTGCGTGAACGTCAGGAAGATATTGAACTATTGGTGCATTACTTTTTACATCTGCATACCCGTCGTCTGGGATCGGTTTATCCTGGCATTGCTCCCGATGTCGTCGAAATATTGCGTAAGCATCGTTGGCCCGGAAACCTGCGCGAGTTAAGCAATTTGATGGAATATCTGGTTAACGTGGTTCCTTCAGGTGAAGTTATCGACAGCACGCTATTGCCGCCAAATCTGCTGAATAATGGCACAACGGAGCAAAGTGATGTAACAGAGGTCAGTGAGGCGCACCTGTCACTCGATGATGCGGGCGGCACGGCGCTGGAGGAGATGGAAAAGCAAATGATCCGCGAGGCGCTTTCACGTCATAACAGCAAGAAGCAAGTTGCTGATGAACTGGGCATCGGCATTGCTACGCTCTATCGCAAGATTAAGAAATATGAGTTGTTAAACACATAA", + "dna_sequence_length": 1779, + "functions": [ + "putative sigma-54-interacting transcriptional activator" + ], + "id": "CDS_2826", + "location": [ + [ + "NC_000913", + 3005786, + "-", + 1779 + ] + ], + "md5": "9d82487917d5e075d11587bca90d740d", + "parent_gene": "", + "protein_md5": "c0855d46cd42c4a166fb830f6e184840", + "protein_translation": "MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTPVILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISKIFATMIDNMDQGVLVVDDENRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT", + "protein_translation_length": 592, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009425" + ], + [ + "gene_synonym", + "ECK2866" + ], + [ + "gene_synonym", + "EcoGene:EG13053" + ], + [ + "gene_synonym", + "GI:49176276" + ], + [ + "gene_synonym", + "GeneID:945826" + ], + [ + "gene_synonym", + "JW5463" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46803" + ], + [ + "gene_synonym", + "YP_026185.1" + ], + [ + "gene_synonym", + "b2870" + ], + [ + "gene_synonym", + "ygeW" + ] + ], + "dna_sequence": "ATGATGAAAACTGTTAATGAGCTGATTAAGGATATCAATTCGCTGACCTCTCACCTTCACGAGAAAGATTTTTTGTTAACGTGGGAACAGACGCCAGATGAACTGAAACAAGTACTGGACGTTGCCGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACCGTGCGTGAAACCGCCAATATGATCTCCTTCTGCGCCGACGCTATTGGTATTCGCGACGATATGTATCTGGGCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATTGCTGCGTGCGAACGATCACGAAGGCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTACTGAAGAGATGATGGAACTGACCCGTGATGGCGAAGCCCTGTACATGCACTGCCTGCCAGCTGATATCAGCGGCGTATCCTGTAAAGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA", + "dna_sequence_length": 1191, + "functions": [ + "putative carbamoyltransferase" + ], + "id": "CDS_2827", + "location": [ + [ + "NC_000913", + 3006262, + "+", + 1191 + ] + ], + "md5": "a875bb3d0d90d05b69d4f18a50994707", + "parent_gene": "", + "protein_md5": "77bdf7f72ab2f675745beea848f0151b", + "protein_translation": "MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009428" + ], + [ + "gene_synonym", + "ECK2867" + ], + [ + "gene_synonym", + "EcoGene:EG13054" + ], + [ + "gene_synonym", + "GI:16130773" + ], + [ + "gene_synonym", + "GeneID:947012" + ], + [ + "gene_synonym", + "JW2839" + ], + [ + "gene_synonym", + "NP_417347.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66899" + ], + [ + "gene_synonym", + "b2871" + ], + [ + "gene_synonym", + "ygeX" + ] + ], + "dna_sequence": "ATGTCCGTTTTCTCATTGAAGATTGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGTGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGCGCGGTGTGGCGTGGGCAGCACAGCAACTCGGACAGAATGCGGTGATTTACATGCCGAAAGGTTCTGCTCAGGAACGCGTTGACGCCATTCTGAACCTCGGTGCCGAGTGCATCGTCACGGATATGAACTATGACGATACCGTTCGCCTGACCATGCAACACGCGCAGCAGCACGGCTGGGAAGTGGTACAGGACACGGCATGGGAAGGTTACACCAAAATCCCAACCTGGATCATGCAAGGCTACGCAACCCTGGCAGATGAAGCCGTCGAGCAAATGCGTGAAATGGGCGTAACCCCGACGCACGTTCTGCTGCAAGCCGGTGTCGGAGCAATGGCCGGTGGTGTGCTGGGTTATCTGGTCGACGTCTATAGCCCGCAAAATCTGCACAGCATTATTGTTGAACCTGACAAAGCTGACTGTATTTATCGCTCCGGCGTCAAAGGCGACATCGTCAACGTTGGCGGTGATATGGCCACCATCATGGCAGGCCTGGCCTGTGGCGAACCTAACCCGCTGGGCTGGGAAATCCTACGTAACTGCGCCACCCAATTCATCTCCTGCCAGGACAGCGTTGCCGCATTAGGTATGCGCGTGCTGGGTAATCCGTACGGCAACGACCCGCGCATCATCTCCGGTGAATCCGGCGCTGTCGGTTTGGGCGTTCTCGCAGCGGTTCATTATCACCCGCAACGTCAAAGCCTGATGGAAAAACTGGCGCTGAACAAAGATGCCGTGGTGCTGGTTATCAGCACTGAAGGCGACACCGACGTGAAGCACTACCGCGAAGTTGTCTGGGAAGGCAAACACGCTGTAGCACCTTAA", + "dna_sequence_length": 1197, + "functions": [ + "2,3-diaminopropionate ammonia lyase, PLP-dependent" + ], + "id": "CDS_2828", + "location": [ + [ + "NC_000913", + 3007510, + "+", + 1197 + ] + ], + "md5": "711da61e30ef721f6a856d8b47b15fef", + "parent_gene": "", + "protein_md5": "26909ae862b272187e42c0b14a1c15d3", + "protein_translation": "MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009434" + ], + [ + "gene_synonym", + "ECK2868" + ], + [ + "gene_synonym", + "EcoGene:EG13055" + ], + [ + "gene_synonym", + "GI:16130774" + ], + [ + "gene_synonym", + "GeneID:947360" + ], + [ + "gene_synonym", + "JW2840" + ], + [ + "gene_synonym", + "NP_417348.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65807" + ], + [ + "gene_synonym", + "b2872" + ], + [ + "gene_synonym", + "ygeY" + ] + ], + "dna_sequence": "ATGGCTAAGAATATTCCATTCAAACTGATTCTTGAAAAAGCAAAAGATTACCAGGCGGATATGACTCGCTTCCTGCGCGACATGGTTGCTATTCCCAGTGAAAGCTGCGACGAGAAACGCGTAGTACATCGTATTAAAGAAGAGATGGAAAAAGTCGGCTTCGATAAAGTTGAAATCGACCCGATGGGCAACGTTCTCGGTTATATCGGCCACGGCCCGCGTCTGGTGGCAATGGACGCTCATATCGATACCGTCGGCATTGGCAACATCAAAAACTGGGACTTCGATCCGTACGAAGGCATGGAAACTGATGAACTGATTGGTGGTCGCGGTACTTCCGACCAGGAAGGTGGCATGGCCTCTATGGTTTATGCCGGTAAAATCATTAAAGACCTCGGTCTGGAAGATGAATATACCCTGCTGGTTACCGGTACGGTGCAGGAAGAAGACTGCGACGGTCTGTGCTGGCAGTACATTATTGAACAATCCGGCATTCGCCCGGAATTTGTGGTCAGTACCGAACCAACCGACTGCCAGGTATACCGTGGTCAGCGCGGTCGTATGGAAATTCGTATTGATGTTCAGGGTGTTAGCTGCCACGGTTCTGCACCAGAACGCGGTGATAACGCCATTTTCAAAATGGGTCCGATTCTTGGCGAATTACAAGAACTCTCCCAACGTCTGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAACCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGACCTGGAAAGTGGAAGAAGATCACTTCACCGTTAAAGCACTGGTGAATGCCTACGAAGGGCTGTTTGGCAAAGCGCCGGTTGTTGATAAGTGGACCTTCTCAACTAACGGCGTATCTATCATGGGCCGTCACGGCATTCCGGTGATCGGCTTTGGCCCGGGTAAAGAACCTGAAGCGCATGCACCTAACGAAAAAACCTGGAAATCTCACCTGGTGACCTGTGCCGCGATGTACGCTGCAATCCCGTTAAGCTGGCTGGCAACAGAGTAA", + "dna_sequence_length": 1212, + "functions": [ + "putative peptidase" + ], + "id": "CDS_2829", + "location": [ + [ + "NC_000913", + 3008764, + "+", + 1212 + ] + ], + "md5": "b2139d142295b739d3e3e2deeeabce0a", + "parent_gene": "", + "protein_md5": "56ef52fc84e708556588dd43eb465591", + "protein_translation": "MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE", + "protein_translation_length": 403, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009436" + ], + [ + "gene_synonym", + "ECK2869" + ], + [ + "gene_synonym", + "EcoGene:EG13056" + ], + [ + "gene_synonym", + "GI:90111504" + ], + [ + "gene_synonym", + "GeneID:947359" + ], + [ + "gene_synonym", + "JW2841" + ], + [ + "gene_synonym", + "NP_417349.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46806" + ], + [ + "gene_synonym", + "b2873" + ], + [ + "gene_synonym", + "hyuA" + ], + [ + "gene_synonym", + "ygeZ" + ] + ], + "dna_sequence": "ATGCGCGTATTGATCAAAAACGGCACTGTCGTTAACGCAGATGGACAAGCCAAACAGGATTTGCTGATTGAAAGCGGGATTGTTCGCCAGTTGGGCAACAATATTTCGCCGCAGCTCCCGTATGAAGAAATTGATGCCACTGGCTGTTACGTTTTCCCTGGCGGCGTGGATGTCCATACGCATTTCAATATTGATGTCGGCATCGCGCGCAGTTGTGATGATTTTTTTACCGGTACCCGCGCAGCTGCGTGTGGCGGTACAACAACCATTATTGACCATATGGGATTTGGCCCAAACGGCTGTCGGTTACGCCATCAACTGGAGGTTTATCGTGGTTATGCCGCCCATAAAGCGGTCATCGATTACAGCTTTCACGGTGTGATCCAGCACATTAATCACGCAATCCTCGACGAAATCCCGATGATAGTCGAGGAAGGACTGAGCAGTTTTAAACTCTATTTAACCTATCAATACAAACTCAACGATGACGAGGTTTTGCAGGCATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCACAAATTGCCGGTAACGCCCCGCTCTATATCGTGCACCTGTCTAACGGCTTAGGTCTGGATTATCTGCGTCTTGCCCGTGCGAATCACCAGCCAGTCTGGGTTGAAACCTGCCCACAATATCTCCTGTTGGACGAACGCAGTTACGATACAGAAGATGGCATGAAGTTCATTCTTAGCCCACCGCTGCGTAACGTACGCGAGCAGGACAAACTGTGGTGTGGCATCAGCGATGGTGCGATTGACGTGGTGGCAACCGATCACTGCACCTTCTCGATGGCTCAACGCCTGCAAATTTCTAAAGGCGATTTCAGTCGCTGCCCAAATGGCTTACCCGGTGTGGAAAACCGCATGCAGTTACTGTTTTCCAGTGGCGTGATGACGGGACGTATAACACCGGAACGCTTTGTTGAATTAACCAGCGCAATGCCCGCCAGGTTGTTTGGCCTGTGGCCGCAAAAAGGATTATTAGCGCCCGGTTCCGACGGCGACGTGGTGATTATCGACCCACGTCAGAGCCAACAAATTCAGCATCGCCATCTCCACGACAACGCCGACTACTCGCCATGGGAGGGTTTTACCTGTCAGGGCGCGATTGTCAGAACCTTATCCCGTGGTGAAACGATTTTCTGTGACGGCACCTTTACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAA", + "dna_sequence_length": 1386, + "functions": [ + "D-stereospecific phenylhydantoinase" + ], + "id": "CDS_2830", + "location": [ + [ + "NC_000913", + 3010028, + "+", + 1386 + ] + ], + "md5": "b14a8810e151e73883c5acdf2bd88f55", + "parent_gene": "", + "protein_md5": "97d356d5e61a54c1572589bb6b347ac5", + "protein_translation": "MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009438" + ], + [ + "gene_synonym", + "ECK2870" + ], + [ + "gene_synonym", + "EcoGene:EG13057" + ], + [ + "gene_synonym", + "GI:16130776" + ], + [ + "gene_synonym", + "GeneID:947358" + ], + [ + "gene_synonym", + "JW2842" + ], + [ + "gene_synonym", + "NP_417350.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46807" + ], + [ + "gene_synonym", + "b2874" + ], + [ + "gene_synonym", + "yqeA" + ] + ], + "dna_sequence": "ATGAGTAAGAAAATTGTTCTCGCCCTGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTGGGCATGATTAACCAGGCCTTTGAAGCTGCCGCAAAAACTGAAGCGCACTCGCCAATGCTGCCGATGTCTGTCTGTGTTGCATTAAGCCAGGGTTATATTGGTTACGATCTACAAAACGCTTTAAGAGAAGAACTGCTTTCTCGGGGCATTAATAAACCTGTAGCAACGCTGGTTACTCAGGTCGAAGTCGACGCTAACGATCCGGCATTCCTCAACCCGACCAAGCCGATCGGTTCGTTCTTTACCGAGCAAGAAGCAGAGCAACTGACAAAACAGGGTTACACTCTGAAAGAAGATGCTGGTCGCGGCTATCGCCGTGTTGTTGCCTCGCCAAAACCGGTTGATATCATTGAAAAAGAAACGGTTAAAGCTCTGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAA", + "dna_sequence_length": 933, + "functions": [ + "putative amino acid kinase" + ], + "id": "CDS_2831", + "location": [ + [ + "NC_000913", + 3011461, + "+", + 933 + ] + ], + "md5": "f49deed5e2f61338d35cc8dbf7e568ae", + "parent_gene": "", + "protein_md5": "1f71bd628b1094941a35fcc94fe24213", + "protein_translation": "MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGIEGKTGTVICQ", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009441" + ], + [ + "gene_synonym", + "ECK2871" + ], + [ + "gene_synonym", + "EcoGene:EG13058" + ], + [ + "gene_synonym", + "GI:16130777" + ], + [ + "gene_synonym", + "GeneID:947357" + ], + [ + "gene_synonym", + "JW2843" + ], + [ + "gene_synonym", + "NP_417351.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46808" + ], + [ + "gene_synonym", + "b2875" + ], + [ + "gene_synonym", + "yqeB" + ] + ], + "dna_sequence": "ATGAATATTTTCACAGAGGCTGCAAAACTCGAAGAGCAAAATTGTCCGTTTGCTATGGCGCAAATTGTTGATAGCCGAGGCTCGACTCCCCGCCATTCTGCACAAATGTTAGTGCGCGCCGATGGTTCTATCGTCGGTACAATTGGTGGCGGAATGGTTGAGCGGAAGGTGATTGAAGAGTCGCTTCAGGCATTGCAGGAACGTAAGCCGCGATTATTCCATGGACGTATGGCTCGTAACGGTGCGGATGCTGTCGGGTCAGATTGTGGAGGTGCAATGTCAGTATTTATCAGCGTCCATGGTATGCGTCCACGTCTGGTGTTGATTGGCGCGGGGCATGTCAACCGGGCGATAGCCCAGAGTGCGGCGCTATTAGGATTTGATATTGCCGTTGCTGATATTTATCGCGAAAGCCTCAATCCTGAACTATTCCCACCATCAACCACGCTTCTCCATGCTGAGTCGTTTGGTGCGGCAGTGGAAGCACTGGATATTCGCCCTGATAATTTTGTCCTGATTGCCACGAATAATCAGGATCGTGAAGCCCTCGACAAACTCATTGAACAGCCCATTGCATGGTTGGGGTTGCTGGCAAGTCGTCGCAAGGTTCAGCTTTTCCTGCGTCAATTGCGTGAGAAAGGCGTGGCTGAAGAACATATTGCCCGTTTACATGCGCCCGTTGGTTACAACATAGGTGCGGAAACGCCGCAGGAGATCGCCATCAGCGTGCTGGCAGAAATATTACAGGTGAAAAATAACGCGCCGGGTGGGCTGATGATGAAACCTTCTCATCCTTCCGGACACCAGCTGGTGGTGATTCGCGGTGCGGGAGATATCGCCAGTGGTGTGGCGCTACGTCTGTATCATGCGGGTTTTAAAGTGATCATGCTGGAAGTGGAAAAACCGACAGTGATTCGTTGTACCGTGGCGTTTGCCCAGGCCGTGTTCGATGGCGAAATGACGGTCGAAGGCGTCACTGCTCGCCTGGCAACCAGCTCTGCGGAAGCGATGAAACTTACCGAACGCGGATTCATTCCTGTGATGGTAGATCCCGCCTGTTCATTGCTTGATGAACTGAAACCGCTTTGCGTGGTGGACGCTATTCTGGCGAAACAGAATTTGGGAACGCGGGCAGATATGGCACCAGTAACAATCGCGCTTGGGCCGGGCTTTACTGCTGGGAAGGATTGTCATGCGGTAATTGAAACAAATCGCGGGCACTGGCTCGGTCAGGTGATTTACTCTGGTTGTGCGCAGGAGAATACCGGTGTTCCTGGCAATATTATGGGGCATACCACCCGACGGGTGATCCGTGCTCCTGCTGCAGGCATTATGCGATCCAACGTGAAATTAGGCGATCTGGTGAAAGAGGGCGATGTGATTGCCTGGATTGGTGAGCATGAAATTAAAGCACCGTTGACGGGGATGGTGCGTGGCTTGTTGAACGACGGCCTGGCAGTGGTTGGTGGTTTTAAAATTGGTGATATCGATCCTCGTGGTGAAACCGCTGATTTCACCAGCGTTTCTGATAAAGCCCGGGCGATTGGCGGCGGCGTACTTGAGGCGTTAATGATGTTGATGCATCAGGGCGTGAAAGCGACAAAAGAAGTGCTGGAAGTGGCTTAA", + "dna_sequence_length": 1626, + "functions": [ + "XdhC-CoxI family protein with NAD(P)-binding Rossman fold" + ], + "id": "CDS_2832", + "location": [ + [ + "NC_000913", + 3014239, + "-", + 1626 + ] + ], + "md5": "652f91ab84baca8107eaf028407b9b06", + "parent_gene": "", + "protein_md5": "aceb0f412410ee45d060420b8f57c386", + "protein_translation": "MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSIVGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAVEALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEEHIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGAGDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSAEAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFTAGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVKLGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSVSDKARAIGGGVLEALMMLMHQGVKATKEVLEVA", + "protein_translation_length": 541, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009443" + ], + [ + "gene_synonym", + "ECK2872" + ], + [ + "gene_synonym", + "EcoGene:EG13059" + ], + [ + "gene_synonym", + "GI:90111505" + ], + [ + "gene_synonym", + "GeneID:947350" + ], + [ + "gene_synonym", + "JW5464" + ], + [ + "gene_synonym", + "NP_417352.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46809" + ], + [ + "gene_synonym", + "b2876" + ], + [ + "gene_synonym", + "yqeC" + ] + ], + "dna_sequence": "GTGAAAAGTATAGTTGACCCATCGGCATTAGTCATTGATTTAGGTGCGCAGAAACGTCCCACTGTGATTTCTGTTGTTGGTGCTGGGGGGAAAACCAGCTTGCTTTTTTGGCTGGCAGAACTGCTCCAGGCTAGCGGCAGGCGTGTGTTAATCACGACGACGACACATATGTTTATGCCAACGTCTCACTGGCCCGTGGTTTTCTGTCGTGATCCCGCCATGCTTCCTCATGCGTCTCTTACATCCCCCATTTCATTTTGTTTTCACAGCTGGAAAGCGAACCAGGGAAAAGTGCAGGGATTTACGCCAGAAGCGATTGATGCACTGGTGCAACGACCAGAGTGTGACGTAATTCTCATTGAAGCAGATGGCTCGCGTGGAATGCCGTTAAAAGCGCCTGATGAGCACGAACCTTGCATACCCAAAAGCAGTTGCTGCGTGATTGCTGTGATGGGAGGACATACTTTGGGCGCGAAAGTGAGCACAGAAAATGTCCATCGCTGGTCGCAGTTTGCTGATATTACCGGGTTAACACCTGATGCAACCTTGCAACTGAGCGATCTCGTTGCGCTGGTTCGCCACCCTCAGGGGGCGTTTAAAAACGTACCGCAAGGTTGTCGGCGAGTCTGGTTCATTAACCGTTTTTCTCAATGTGAGAATGCGATTGCACAAAGCGAGCTCCTTCAACCGCTGCAACAACACGACGTAGAGGCAATCTGGCTGGGCGATATACAAGAACATCCTGCAATCGCGCGCAGATTTGTGAATTAG", + "dna_sequence_length": 771, + "functions": [ + "putative selenium-dependent hydroxylase accessory protein" + ], + "id": "CDS_2833", + "location": [ + [ + "NC_000913", + 3015057, + "-", + 771 + ] + ], + "md5": "a4ef97ca48c20d8ae8c17b5a051844e2", + "parent_gene": "", + "protein_md5": "f96003c83f41f4a283c4234c780de4ed", + "protein_translation": "MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009447" + ], + [ + "gene_synonym", + "ECK2873" + ], + [ + "gene_synonym", + "EcoGene:EG13060" + ], + [ + "gene_synonym", + "GI:16130779" + ], + [ + "gene_synonym", + "GeneID:947356" + ], + [ + "gene_synonym", + "JW2845" + ], + [ + "gene_synonym", + "NP_417353.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46810" + ], + [ + "gene_synonym", + "b2877" + ], + [ + "gene_synonym", + "mocA" + ], + [ + "gene_synonym", + "ygfJ" + ] + ], + "dna_sequence": "ATGTCAGCCATCGACTGTATAATTACCGCTGCCGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGGAACAGGGAACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTGGTAATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAG", + "dna_sequence_length": 579, + "functions": [ + "CTP:molybdopterin cytidylyltransferase" + ], + "id": "CDS_2834", + "location": [ + [ + "NC_000913", + 3015160, + "+", + 579 + ] + ], + "md5": "266191954efafcb04e8cc4e34f273649", + "parent_gene": "", + "protein_md5": "03a198eccece8086ffbc95c5fb0452a3", + "protein_translation": "MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009450" + ], + [ + "gene_synonym", + "ECK2874" + ], + [ + "gene_synonym", + "EcoGene:EG13061" + ], + [ + "gene_synonym", + "GI:16130780" + ], + [ + "gene_synonym", + "GeneID:949068" + ], + [ + "gene_synonym", + "JW5923" + ], + [ + "gene_synonym", + "NP_417354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46811" + ], + [ + "gene_synonym", + "b2878" + ], + [ + "gene_synonym", + "ygfK" + ] + ], + "dna_sequence": "ATGGGGGATATTATGCGTCCCATTCCGTTTGAGGAACTTTTGACGCGCATATTTGATGAATACCAACAACAACGCTCAATCTTTGGTATTCCCGAGCAACAGTTTTACTCACCTGTAAAAGGTAAAACTGTTAGCGTCTTCGGTGAAACCTGTGCCACTCCCGTCGGCCCTGCCGCTGGCCCGCACACGCAGCTCGCGCAAAATATTGTCACTTCCTGGCTGACTGGCGGACGCTTCATCGAACTAAAAACCGTCCAAATTCTTGACCGCCTGGAGCTGGAAAAGCCCTGTATCGATGCCGAAGACGAGTGCTTTAACACCGAATGGTCTACCGAGTTTACCCTGCTTAAAGCCTGGGATGAATACCTCAAAGCCTGGTTTGCCCTGCACCTTCTCGAAGCGATGTTCCAGCCTTCTGATTCCGGTAAATCGTTCATCTTTAATATGAGCGTCGGTTACAACCTCGAAGGTATTAAGCAACCGCCGATGCAACAGTTCATCGACAATATGATGGACGCATCTGACCATCCGAAATTCGCTCAATATCGCGATACGCTGAATAAATTACTCCAGGATGACGCATTTTTAGCTCGCCACGGATTGCAGGAAAAACGCGAAAGCTTGCAAGCCTTACCCGCTCGCATCCCCACCAGTATGGTGCATGGCGTCACCCTCTCCACCATGCACGGCTGTCCTCCGCATGAAATCGAAGCCATTTGCCGCTACATGCTGGAAGAAAAAGGGCTCAACACCTTTGTGAAACTTAACCCGACCTTACTGGGGTACGCGCGTGTTCGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATTTCTTATTCCGGTGGTGCCAGTCAGCTGACTATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGACTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTGCTACGTTGCCCCCTGTGTTACTGCCTGCGCTATCAAGCAAGATATTCCGGAATACATCCGTCTGCTTGGCGAACACCGCTATGCCGACGCGCTGGAACTCATCTACCAACGCAACGCTCTGCCCGCCATTACCGGTCATATTTGCGATCACCAGTGCCAATACAACTGTACCCGCCTGGATTACGACAGTGCGCTGAATATCCGCGAACTGAAAAAAGTCGCGCTGGAAAAAGGTTGGGATGAATATAAGCAACGCTGGCACAAACCAGCCGGTTCTGGTTCACGCCATCCGGTTGCCGTGATTGGTGCAGGTCCGGCGGGTCTGGCAGCAGGTTACTTCCTTGCCAGAGCGGGCCATCCGGTTACGCTGTTTGAACGCGAAGCCAATGCGGGCGGCGTGGTGAAAAATATCATTCCTCAGTTCCGTATTCCTGCAGAGTTAATTCAGCACGATATCGATTTTGTTGCCGCTCACGGCGTGAAATTTGAGTATGGCTGCTCACCCGATTTAACCATTGAGCAGTTAAAAAATCAGGGCTTCCACTATGTTCTGATTGCCACCGGCACTGATAAAAATAGCGGTGTGAAACTGGCGGGCGACAACCAAAATGTCTGGAAATCACTCCCCTTCCTGCGTGAATACAACAAGGGTACAGCGCTCAAGCTGGGCAAACATGTGGTCGTTGTCGGGGCGGGTAACACCGCAATGGACTGCGCTCGTGCGGCGTTACGCGTTCCAGGCGTAGAAAAAGCAACGATCGTTTACCGTCGTTCACTACAAGAGATGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCAGGATACTGAAGCCCTGAATGCGATGGGCGTGCCGCTGGACAAAAACGGCTGGCCAGACGTCGACCATAATGGCGAAACTCGTCTGACTGACGTCTTTATGATCGGCGACGTACAGCGCGGACCATCCTCCATTGTCGCTGCTGTCGGAACCGCGCGTCGGGCGACCGATGCCATCCTTAGTCGGGAAAATATCCGTTCCCACCAGAACGATAAATACTGGAACAACGTCAATCCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTTTCCAGACGCTGCACCTCGACGCTTACTGTAACGAATGCGGCAACTGCGCTCAGTTCTGTCCGTGGAACGGTAAACCGTACAAAGACAAAATCACCGTCTTCAGCCTGGCGCAAGACTTTGATAACAGCAGCAACCCAGGCTTCCTTGTGGAAGATTGCCGGGTACGAGTACGTCTGAATAACCAAAGCTGGGTGTTAAACATCGACAGCAAAGGTCAGTTTAACAACGTACCACCGGAGCTGAACGATATGTGCCGCATCATCAGCCATGTCCACCAGCATCATCATTATCTGCTGGGCCGCGTGGAGGTGTAA", + "dna_sequence_length": 3099, + "functions": [ + "putative Fe-S subunit oxidoreductase subunit" + ], + "id": "CDS_2835", + "location": [ + [ + "NC_000913", + 3016060, + "+", + 3099 + ] + ], + "md5": "7772e5da817dfe606d03a9ee6d98c064", + "parent_gene": "", + "protein_md5": "affccc9169b0550a7326170650a89211", + "protein_translation": "MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLAQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSKGQFNNVPPELNDMCRIISHVHQHHHYLLGRVEV", + "protein_translation_length": 1032, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009452" + ], + [ + "gene_synonym", + "ECK2875" + ], + [ + "gene_synonym", + "EcoGene:EG13062" + ], + [ + "gene_synonym", + "GI:90111506" + ], + [ + "gene_synonym", + "GeneID:949072" + ], + [ + "gene_synonym", + "JW2847" + ], + [ + "gene_synonym", + "NP_417355.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46812" + ], + [ + "gene_synonym", + "b2879" + ], + [ + "gene_synonym", + "ssnA" + ], + [ + "gene_synonym", + "ygfL" + ] + ], + "dna_sequence": "ATGTTGATTCTGAAGAATGTCACTGCGGTACAGCTACACCCGGCAAAAGTGCAGGAAGGCGTTGATATCGCCATCGAAAACGATGTGATTGTCGCTATCGGCGATGCCCTGACGCAACGCTACCCCGACGCCAGCTTCAAAGAGATGCATGGCCGGATTGTGATGCCAGGGATTGTCTGCTCGCACAACCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCTCCACATTGCGCGACGCATTTTTAAAAGTTGGCCTGCGCGCGATGACCTGTTTTGAAACTACTGACCGTAACAACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAGCCGTGAAAGCCACAGGCCGTGGTTTGCATATTCACGCTGCGGAAGACCTTTACGACGTTTCCTACAGTCACCACTGGTACGGCAAAGACCTGCTGGCACGACTGGCGCAATTCGATCTCATCGACAGCAAAACGCTGGTCGCTCATGGGCTGTACTTGTCGAAAGATGACATCACCCTACTCAATCAGCGCGATGCGTTCCTGGTGCATAACGCCCGTTCAAACATGAACAACCATGTCGGCTACAACCATCACCTTAGCGACATCCGCAATCTGGCGTTGGGAACGGACGGCATTGGTTCGGACATGTTTGAAGAGATGAAATTTGCCTTCTTTAAACATCGCGATGCGGGTGGTCCGCTGTGGCCTGACAGTTTTGCCAAAGCCCTGACTAACGGTAACGAACTGATGAGCCGCAACTTTGGCGCGAAATTTGGGCTTCTGGAAGCCGGTTACAAAGCTGATTTAACCATTTGCGATTACAACTCGCCGACGCCGCTGCTGGCAGACAATATCGCCGGGCATATCGCTTTCGGTATGGGCTCAGGCAGCGTTCACAGCGTGATGGTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAA", + "dna_sequence_length": 1329, + "functions": [ + "putative chlorohydrolase/aminohydrolase" + ], + "id": "CDS_2836", + "location": [ + [ + "NC_000913", + 3019161, + "+", + 1329 + ] + ], + "md5": "98345eae57a0c52ff1fc1d6157dea8e5", + "parent_gene": "", + "protein_md5": "26acda6262c33e006fdca9452f6991a5", + "protein_translation": "MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009456" + ], + [ + "gene_synonym", + "ECK2876" + ], + [ + "gene_synonym", + "EcoGene:EG13063" + ], + [ + "gene_synonym", + "GI:16130782" + ], + [ + "gene_synonym", + "GeneID:949071" + ], + [ + "gene_synonym", + "JW2848" + ], + [ + "gene_synonym", + "NP_417356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64557" + ], + [ + "gene_synonym", + "b2880" + ], + [ + "gene_synonym", + "ygfM" + ] + ], + "dna_sequence": "ATGATTGAACAATTTTTCAGGCCCGACTCTGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAATGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTACAGGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCGCCAGGAAGAGTCGGTGCTGCTTCCCGTCCTGTTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAACGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGCTAACCGAAATTATCATTAAAGATCCGTATCGCACCTGTGCGACCCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATGACAGACCACGACGGTATGCGAATTGCGCTGGATGGCGTCGCCAGTAAAGCACTGCGTCTGCATGATGTCGAAAAACAAAATCTGGAAGGCAATGCACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACGGGAGTTCTGGTAGCCGACCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA", + "dna_sequence_length": 780, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2837", + "location": [ + [ + "NC_000913", + 3020540, + "+", + 780 + ] + ], + "md5": "756afcd10d0393c4de487bf5ae980ab4", + "parent_gene": "", + "protein_md5": "be97866f61c7dc08f7edcd699c4015ca", + "protein_translation": "MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009459" + ], + [ + "gene_synonym", + "ECK2877" + ], + [ + "gene_synonym", + "EcoGene:EG13064" + ], + [ + "gene_synonym", + "GI:16130783" + ], + [ + "gene_synonym", + "GeneID:949079" + ], + [ + "gene_synonym", + "JW2849" + ], + [ + "gene_synonym", + "NP_417357.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46814" + ], + [ + "gene_synonym", + "b2881" + ], + [ + "gene_synonym", + "xdhD" + ], + [ + "gene_synonym", + "ygfN" + ] + ], + "dna_sequence": "ATGATCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAACATGGGAATGCACTCTGTACGCAACAGTGATGATGGTTTCGGGTTTGCCGGTTCTGACGCAATAATCTTTAACGGTAATATCGTTAACGCGTCCTTGCTTATTGCCGCACAGTTAGAGAAGGCAGATATTCGTACCGCAGAATCTCTGGGCAAATGGAACGAGTTAAGTCTGGTTCAACAGGCAATGGTTGATGTTGGCGTGGTGCAGTCTGGTTATAACGATCCAGCTGCAGCTCTGATTATCACCGATCTTCTCGATCGCATCGCCGCACCTACCCGCGAAGAGATCGACGACGCGCTTTCTGGTTTGTTCAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGACCGCGTAACGGCTGACGCCTGCGTCATTAAAATGTTACGTAGCCCACACGCTCACGCACTGATTACTCATCTGGATGTCAGCAAAGCTGAAGCCTTACCGGGCGTCGTTCACGTTATTACTCACCTGAATTGCCCGGATATCTACTATACCCCGGGTGGTCAGAGCGCACCGGAACCGTCACCGCTTGACCGCCGTATGTTCGGCAAGAAAATGCGTCACGTCGGCGATCGTGTTGCTGCGGTCGTCGCAGAAAGTGAAGAAATTGCGCTCGAAGCACTGAAGCTCATCGACGTTGAATATGAAGTGCTTAAGCCGGTAATGTCGATCGACGAAGCAATGGCGGAAGATGCGCCTGTCGTGCACGATGAACCGGTGGTGTATGTTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCATCAACTTCCCGATCGGTTCTCGCCCTCGCAAAAATATCGCCGCCAGTATTCATGGTCATATTGGCGATATGGACAAAGGCTTTGCCGATGCCGATGTGATCATTGAGCGAACCTATAACTCAACGCAAGCGCAGCAGTGCCCGACTGAAACACATATCTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCGCGCCAACACTGGCCCTTACGGCAACCACTCACTCACCGTACCGTGTAACGGACCGGCGCTGTCGCTGCCGTTATATCCGTGCGATAACGTCGATTTCCAGGTCACCACCTACTACAGCAACATTTGCCCAAATGGTGCTTATCAGGGTTATGGCGCACCGAAAGGTAACTTCGCTATCACCATGGCATTAGCGGAACTGGCTGAACAGTTACAGATCGACCAACTGGAAATTATCGAACGTAACCGGGTACACGAAGGGCAAGAGCTGAAAATTCTCGGTGCAATCGGTGAAGGTAAAGCGCCGACCTCCGTTCCTTCCGCCGCCAGCTGTGCACTGGAAGAGATCCTGCGTCAGGGTCGCGAGATGATCCAATGGTCGTCACCGAAACCGCAAAATGGTGACTGGCACATCGGTCGCGGCGTCGCCATTATCATGCAGAAATCGGGTATCCCGGATATCGATCAGGCTAACTGCATGATCAAACTGGAATCGGACGGCACCTTTATCGTTCATTCTGGCGGTGCGGATATTGGTACTGGTCTGGATACTGTAGTGACGAAACTGGCAGCAGAAGTGCTGCACTGCCCACCGCAGGACGTGCATGTTATCTCCGGTGATACCGATCATGCGTTGTTTGATAAAGGCGCATATGCCTCGTCCGGTACTTGCTTCTCGGGTAACGCGGCGCGTTTGGCAGCGGAAAATCTACGGGAGAAAATTCTGTTCCACGGCGCGCAAATGTTGGGTGAGCCAGTGGCAGATGTTCAACTGGCAACGCCGGGCGTCGTGCGCGGCAAGAAAGGCGAAGTTAGTTTCGGGGATATTGCCCATAAAGGCGAAACCGGCACCGGCTTTGGTTCACTGGTGGGAACTGGCAGTTATATCACGCCTGATTTCGCCTTCCCGTATGGCGCAAACTTCGCTGAAGTTGCCGTCAACACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATCGGTGTAAATGGCGCAGCTCCGGCGATTGCTACCGCAATTCACGATGCATGCGGCATCTGGTTACGCGAATGGCATTTCACACCGGAGAAAATACTCACTGCGCTGGAAAAAATATAA", + "dna_sequence_length": 2871, + "functions": [ + "putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding" + ], + "id": "CDS_2838", + "location": [ + [ + "NC_000913", + 3021316, + "+", + 2871 + ] + ], + "md5": "1580c7c538c835650e1164cab4d0ef34", + "parent_gene": "", + "protein_md5": "e4f20fbf39c5091b4f3096141689d0d9", + "protein_translation": "MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI", + "protein_translation_length": 956, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009463" + ], + [ + "gene_synonym", + "ECK2878" + ], + [ + "gene_synonym", + "EcoGene:EG13065" + ], + [ + "gene_synonym", + "GI:90111507" + ], + [ + "gene_synonym", + "GeneID:949075" + ], + [ + "gene_synonym", + "JW2850" + ], + [ + "gene_synonym", + "NP_417358.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67444" + ], + [ + "gene_synonym", + "b2882" + ], + [ + "gene_synonym", + "xanQ" + ], + [ + "gene_synonym", + "ygfO" + ] + ], + "dna_sequence": "ATGTCTGATATAAACCATGCAGGTTCTGACCTTATATTTGAACTGGAGGATCGCCCTCCCTTTCATCAGGCTCTCGTTGGTGCCATTACCCATCTGTTGGCAATTTTCGTTCCGATGGTAACCCCCGCGTTAATCGTGGGTGCGGCCTTACAGCTTTCCGCTGAAACAACTGCCTATCTTGTTTCTATGGCGATGATCGCCTCTGGTATTGGTACCTGGTTACAAGTAAACCGCTACGGCATCGTCGGTTCTGGCCTACTCTCAATTCAGTCAGTCAATTTTTCATTTGTTACGGTCATGATTGCGCTGGGCAGCAGCATGAAAAGCGACGGTTTTCACGAAGAGTTAATCATGTCGTCGCTTCTCGGCGTCTCCTTCGTTGGCGCATTTCTGGTTGTCGGATCTTCATTTATCTTGCCCTATTTACGTCGGGTTATTACGCCTACCGTCAGCGGTATTGTGGTACTGATGATCGGCTTAAGCCTGATTAAAGTCGGCATTATCGATTTTGGTGGAGGATTTGCAGCCAAAAGCAGCGGTACGTTCGGCAATTACGAACATCTCGGCGTTGGTTTATTGGTTTTAATTGTGGTGATCGGCTTTAACTGCTGTCGCAGTCCGTTGCTACGCATGGGAGGGATCGCCATTGGGCTATGTGTCGGCTATATCGCATCGTTATGCCTGGGCATGGTGGATTTCAGCAGTATGCGCAATTTGCCGTTAATCACCATCCCGCATCCGTTCAAATACGGCTTTAGTTTTAGCTTCCATCAGTTCCTGGTGGTTGGCACGATTTATCTGCTTAGCGTGCTGGAAGCAGTCGGCGATATCACCGCCACGGCAATGGTTTCCCGCCGCCCCATTCAGGGGGAAGAGTATCAGTCCCGGCTGAAAGGCGGCGTGCTGGCAGATGGTCTGGTTTCTGTTATCGCCTCCGCTGTCGGTTCATTACCATTAACCACGTTTGCGCAAAATAATGGGGTTATTCAGATGACTGGCGTCGCTTCACGTTATGTCGGGCGAACCATCGCGGTAATGCTGGTTATCCTCGGCTTATTTCCGATGATTGGCGGCTTCTTCACGACCATTCCCTCGGCAGTTCTGGGAGGCGCAATGACGTTGATGTTTTCCATGATTGCCATCGCAGGGATTCGCATCATCATCACCAACGGTTTAAAGCGCCGTGAAACACTTATTGTCGCCACTTCTTTAGGTTTAGGGCTTGGCGTCTCCTACGATCCCGAAATTTTTAAAATATTGCCAGCCTCTATTTATGTATTAGTTGAAAACCCTATTTGTGCTGGCGGGTTAACTGCGATTTTATTAAATATTATCCTCCCTGGTGGCTACCGACAGGAAAACGTTCTGCCTGGTATTACCTCAGCGGAAGAGATGGATTAA", + "dna_sequence_length": 1401, + "functions": [ + "xanthine permease" + ], + "id": "CDS_2839", + "location": [ + [ + "NC_000913", + 3024351, + "+", + 1401 + ] + ], + "md5": "992f76798c152847bc58f6eaa3df3974", + "parent_gene": "", + "protein_md5": "c6c906e0909d680b1efc94d9b2b6c727", + "protein_translation": "MSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSAEEMD", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009465" + ], + [ + "gene_synonym", + "ECK2879" + ], + [ + "gene_synonym", + "EcoGene:EG13066" + ], + [ + "gene_synonym", + "GI:16130785" + ], + [ + "gene_synonym", + "GeneID:947366" + ], + [ + "gene_synonym", + "JW5466" + ], + [ + "gene_synonym", + "NP_417359.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76641" + ], + [ + "gene_synonym", + "b2883" + ], + [ + "gene_synonym", + "guaD" + ], + [ + "gene_synonym", + "ygfP" + ] + ], + "dna_sequence": "ATGATGTCAGGAGAACACACGTTAAAAGCGGTACGAGGCAGTTTTATTGATGTCACCCGTACGATCGATAACCCGGAAGAGATTGCCTCTGCGCTGCGGTTTATTGAGGATGGTTTATTACTCATTAAACAGGGAAAAGTGGAATGGTTTGGCGAATGGGAAAACGGAAAGCATCAAATTCCTGACACCATTCGCGTGCGCGACTATCGCGGCAAACTGATAGTACCGGGCTTTGTCGATACACATATCCATTATCCGCAAAGTGAAATGGTGGGGGCCTATGGTGAGCAATTGCTGGAGTGGTTGAATAAACACACCTTCCCTACTGAACGTCGTTATGAGGATTTAGAGTACGCCCGCGAAATGTCGGCGTTCTTCATCAAGCAGCTTTTACGTAACGGAACCACCACGGCGCTGGTGTTTGGCACTGTTCATCCGCAATCTGTTGATGCGCTGTTTGAAGCCGCCAGTCATATCAATATGCGTATGATTGCCGGTAAGGTGATGATGGACCGCAACGCACCGGATTATCTGCTCGACACTGCCGAAAGCAGCTATCACCAAAGCAAAGAACTGATCGAACGCTGGCACAAAAATGGTCGTCTGCTATATGCGATTACGCCACGCTTCGCCCCGACCTCATCTCCTGAACAGATGGCGATGGCGCAACGCCTGAAAGAAGAATATCCGGATACGTGGGTACATACCCATCTCTGTGAAAACAAAGATGAAATTGCCTGGGTGAAATCGCTTTATCCTGACCATGATGGTTATCTGGATGTTTACCATCAGTACGGCCTGACCGGTAAAAACTGTGTCTTTGCTCACTGCGTCCATCTCGAAGAAAAAGAGTGGGATCGTCTCAGCGAAACCAAATCCAGCATTGCTTTCTGTCCGACCTCCAACCTTTACCTCGGCAGCGGCTTATTCAACTTGAAAAAAGCATGGCAGAAGAAAGTTAAAGTGGGCATGGGAACGGATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAA", + "dna_sequence_length": 1320, + "functions": [ + "guanine deaminase" + ], + "id": "CDS_2840", + "location": [ + [ + "NC_000913", + 3025766, + "+", + 1320 + ] + ], + "md5": "902b45964adc9bbceebe5956efb1d5f7", + "parent_gene": "", + "protein_md5": "97da95165eb12ee19318cf46176dd87d", + "protein_translation": "MMSGEHTLKAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174113" + ], + [ + "gene_synonym", + "ECK2880" + ], + [ + "gene_synonym", + "EcoGene:EG13067" + ], + [ + "gene_synonym", + "GI:49176279" + ], + [ + "gene_synonym", + "GeneID:2847748" + ], + [ + "gene_synonym", + "JW5467" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46817" + ], + [ + "gene_synonym", + "YP_026186.1" + ], + [ + "gene_synonym", + "b4464" + ], + [ + "gene_synonym", + "ghxQ" + ], + [ + "gene_synonym", + "ygfQ" + ], + [ + "gene_synonym", + "ygfR" + ] + ], + "dna_sequence": "ATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGCCACAGGGCGCGCTGGATAATTATTTTAAAATTACCGCTCGTGGCAGTACCGTTCGTCAGGAAGTACTGGCTGGCTTAACGACCTTTCTGGCCATGGTTTATTCCGTTATCGTCGTTCCGGGAATGCTGGGCAAAGCAGGTTTTCCTCCCGCAGCTGTGTTTGTTGCCACCTGTCTGGTCGCGGGCTTCGGCTCGTTGCTGATGGGATTATGGGCTAATTTGCCAATGGCGATTGGTTGCGCGATTTCCTTGACGGCGTTTACCGCATTCAGTCTGGTACTCGGGCAACAAATTAGCGTTCCTGTCGCACTGGGCGCGGTATTTCTGATGGGCGTCATCTTCACCGCCATTTCCGTAACCGGTGTGCGTACCTGGATCTTACGTAATTTGCCGATGGGTATCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCGTACCCGGCGGGATCTTGTTGGTGATTATTGCAATTTCGATCATCGGCTTAATCTTTGACCCAGCGGTGAAATACCACGGTCTGGTGGCGATGCCAAGCCTGACTGGCGAAGATGGTAAGTCTCTGATTTTCAGCCTCGATATTATGGGTGCACTCCAGCCAACTGTACTTCCGAGTGTACTGGCATTGGTGATGACCGCAGTGTTCGACGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAACAGGTTTAACCGCAACCGTAGTGGGGGCGTTATTCCTGTTAATTCTGTTTTTATCACCGCTGTCATTTTTGATCCCTGGTTACGCCACTGCACCCGCTCTGATGTACGTAGGTTTGCTGATGTTAAGTAACGTCTCGAAGCTGGATTTCAATGATTTTATTGACGCTATGGCTGGCCTGGTGTGTGCCGTGTTCATCGTTCTGACTTGTAATATCGTTACCGGTATTATGCTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAA", + "dna_sequence_length": 1368, + "functions": [ + "guanine/hypoxanthine permease, high affinity", + "guanine/hypoxanthine:H+ symporter" + ], + "id": "CDS_2841", + "location": [ + [ + "NC_000913", + 3027121, + "+", + 1368 + ] + ], + "md5": "b0df3cd081c8776fae5ec46f2496d975", + "parent_gene": "", + "protein_md5": "91e4634553e74b24c052e927f8591eea", + "protein_translation": "MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPSLTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGALFLLILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI", + "protein_translation_length": 455, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009471" + ], + [ + "gene_synonym", + "ECK2881" + ], + [ + "gene_synonym", + "EcoGene:EG13069" + ], + [ + "gene_synonym", + "GI:90111508" + ], + [ + "gene_synonym", + "GeneID:949016" + ], + [ + "gene_synonym", + "JW5468" + ], + [ + "gene_synonym", + "NP_417362.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46819" + ], + [ + "gene_synonym", + "b2886" + ], + [ + "gene_synonym", + "ygfS" + ] + ], + "dna_sequence": "ATGAAATCGTTAATTATCGTTAATCCGGCTGACTGTATTGGCTGCCGTACTTGTGAAGTAGCCTGTGTGGTCGCTCACCCTTCAGAACAGGAGTTGAATGCCGATGTCTTTTTACCCCGGCTGAAGGTACAGCGACTGGACAGCATCAGTGCGCCGGTGATGTGCCATCAGTGTGAAAACGCCCCTTGTGTTGGCGCTTGCCCCGTGGGGGCGCTGACGATGGGCGAGCAGGTGGTGCAGACCAATTCTGCCCGTTGTATTGGCTGTCAGAGTTGCGTCAGTGCGTGCCCGTTTGGAATGATCACCATTCAGTCGTTGCCGGGGGATACCCGACAACAAATTGTGAAATGCGATCTCTGTGAACAGCGGGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGA", + "dna_sequence_length": 489, + "functions": [ + "putative 4Fe-4S ferredoxin-type oxidoreductase subunit" + ], + "id": "CDS_2842", + "location": [ + [ + "NC_000913", + 3029012, + "-", + 489 + ] + ], + "md5": "742da4293313983c8027204396bc98c1", + "parent_gene": "", + "protein_md5": "5adc6fcf1733482f402d80c2551253f9", + "protein_translation": "MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009473" + ], + [ + "gene_synonym", + "ECK2882" + ], + [ + "gene_synonym", + "EcoGene:EG13070" + ], + [ + "gene_synonym", + "GI:90111509" + ], + [ + "gene_synonym", + "GeneID:949018" + ], + [ + "gene_synonym", + "JW5469" + ], + [ + "gene_synonym", + "NP_417363.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46820" + ], + [ + "gene_synonym", + "b2887" + ], + [ + "gene_synonym", + "ygfT" + ] + ], + "dna_sequence": "ATGAATAAGTTTATTGCTGCTGAAGCTGCGGAATGTATAGGCTGTCATGCTTGTGAAATTGCCTGTGCGGTGGCACACAATCAAGAAAACTGGCCGCTGAGTCACAGTGACTTTCGACCGCGTATCCACGTTGTAGGGAAAGGCCAGGCTGCGAATCCGGTGGCCTGCCATCACTGCAACAATGCCCCTTGCGTTACGGCTTGTCCGGTTAATGCTCTGACTTTCCAGTCCGATAGCGTACAACTGGACGAGCAAAAATGTATTGGTTGTAAAAGATGCGCAATCGCTTGCCCCTTTGGCGTCGTTGAGATGGTCGATACGATTGCGCAGAAATGCGACCTTTGTAACCAGCGCAGTTCCGGCACGCAAGCCTGTATTGAAGTTTGCCCAACACAGGCGTTACGACTGATGGACGATAAAGGGTTGCAGCAGATAAAGGTGGCCCGCCAGCGCAAAACGGCAGCAGGAAAAGCGTCATCAGACGCTCAGCCATCTCGCAGTGCAGCGTTGCTCCCCGTTAACTCGCGTAAAGGCGCAGATAAAATTTCAGCGAGTGAACGGAAAACCCACTTTGGCGAAATATATTGCGGGCTGGATCCACAACAAGCGACTTATGAGAGTGACCGCTGTGTTTATTGTGCCGAAAAAGCTAACTGCAACTGGCATTGCCCGCTGCATAACGCTATTCCGGATTACATCCGTCTGGTACAGGAAGGAAAGATTATTGAAGCGGCAGAACTTTGCCACCAGACCAGTTCCTTACCAGAAATTTGCGGCAGGGTATGTCCACAGGACCGTCTTTGTGAAGGCGCATGTACTTTGAAAGATCACTCGGGCGCAGTCTCTATCGGTAATCTGGAACGCTACATCACCGATACCGCGCTGGCGATGGGCTGGCGTCCCGATGTCAGCAAAGTTGTTCCCCGTAGCGAAAAAGTGGCGGTGATTGGCGCTGGGCCTGCAGGGTTAGGGTGTGCTGATATTCTGGCGCGCGCAGGAGTTCAGGTCGATGTCTTTGATCGCCATCCAGAAATTGGCGGTATGCTGACTTTTGGCATTCCTCCTTTCAAACTCGATAAAACGGTATTAAGCCAGCGGCGAGAGATATTCACCGCAATGGGAATCGACTTTCATCTTAACTGTGAAATTGGCCGCGATATTACCTTTAGCGATTTAACTTCTGAATATGATGCAGTTTTCATCGGCGTGGGGACTTACGGGATGATGCGAGCAGATCTGCCGCATGAAGATGCGCCCGGTGTCATTCAGGCTCTACCGTTCCTGACTGCCCATACCCGCCAGCTCATGGGATTGCCGGAGTCTGAAGAGTATCCGCTGACGGACGTGGAAGGTAAGCGAGTCGTGGTATTGGGCGGTGGCGATACGACAATGGATTGTTTGCGGACTTCCATCCGCCTCAATGCCGCCAGCGTGACCTGCGCGTATCGTCGTGATGAAGTCAGTATGCCGGGCTCGCGCAAAGAGGTGGTTAATGCGCGCGAGGAAGGTGTCGAGTTTCAGTTCAATGTTCAACCGCAATATATCGCTTGTGACGAAGATGGGCGTTTAACTGCGGTGGGCCTGATTCGTACCGCCATGGGTGAGCCGGGGCCGGATGGTCGCCGTCGTCCTCGTCCGGTAGCGGGTTCAGAGTTTGAATTGCCCGCCGATGTTCTGATTATGGCCTTTGGTTTCCAGGCGCATGCCATGCCGTGGTTGCAGGGCAGCGGAATTAAACTCGATAAATGGGGCCTGATTCAAACCGGTGACGTCGGGTATTTACCTACCCAGACGCATCTGAAAAAAGTCTTTGCTGGTGGTGATGCAGTTCATGGCGCGGATCTGGTTGTCACTGCAATGGCCGCAGGAAGGCAGGCGGCGCGCGATATGTTAACTCTGTTTGATACGAAGGCATCGTGA", + "dna_sequence_length": 1920, + "functions": [ + "putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit" + ], + "id": "CDS_2843", + "location": [ + [ + "NC_000913", + 3030931, + "-", + 1920 + ] + ], + "md5": "6c3c05bd97d2a0bd03053d71e067d100", + "parent_gene": "", + "protein_md5": "5ea93aad0b0844cc73b8009d8460e9de", + "protein_translation": "MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSSGTQACIEVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSDAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS", + "protein_translation_length": 639, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009478" + ], + [ + "gene_synonym", + "ECK2883" + ], + [ + "gene_synonym", + "EcoGene:EG13071" + ], + [ + "gene_synonym", + "GI:90111510" + ], + [ + "gene_synonym", + "GeneID:949017" + ], + [ + "gene_synonym", + "JW5470" + ], + [ + "gene_synonym", + "NP_417364.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46821" + ], + [ + "gene_synonym", + "b2888" + ], + [ + "gene_synonym", + "uacT" + ], + [ + "gene_synonym", + "ygfU" + ] + ], + "dna_sequence": "ATGAGCGCCATAGATTCCCAACTTCCCTCATCTTCTGGGCAAGACCGCCCAACTGATGAGGTTGACCGCATATTATCACCAGGAAAGCTGATCATACTCGGTCTGCAACACGTCCTTGTCATGTACGCAGGTGCAGTCGCTGTTCCTCTTATGATTGGTGACCGACTGGGCCTCTCAAAAGAAGCTATTGCGATGCTCATTAGCTCGGATCTCTTTTGCTGCGGGATCGTCACATTATTGCAATGTATCGGTATCGGCCGCTTTATGGGGATCCGCCTGCCGGTGATTATGTCGGTGACCTTTGCTGCTGTAACACCAATGATAGCCATTGGGATGAACCCGGATATCGGCCTGCTGGGGATATTTGGTGCCACTATCGCCGCGGGTTTTATCACCACATTATTAGCGCCACTTATCGGTCGCTTGATGCCTTTATTCCCGCCACTGGTTACCGGTGTGGTTATTACTTCTATCGGGCTTAGCATCATTCAGGTGGGTATTGACTGGGCCGCCGGAGGTAAAGGGAATCCGCAATATGGTAATCCCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGCCGATGTCGTTTGGTATGCCGATTTTCGATCCCGTTTCCATTCTGACCATGACTGCCGTGTTAATCATCGTGTTTATCGAGTCAATGGGGATGTTCCTGGCACTGGGTGAAATAGTCGGTCGTAAACTCTCTTCGCACGATATTATTCGCGGGCTGCGTGTCGATGGCGTAGGGACAATGATAGGCGGCACGTTTAACAGCTTCCCCCACACGTCATTTTCTCAAAACGTTGGCCTGGTTAGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCACGATTTCTTTTCTAAGTTACCGGCCGTACTGCAACCGCTGCTACATAGCGGCATTATGCTCGCAACCCTTAGCGCCGTTGTGCTGAACGTCTTCTTTAATGGCTATCAGCATCATGCTGACCTGGTGAAGGAATCCGTCTCTGATAAAGATTTAAAAGTCAGGACAGTACGTATGTGGCTTCTGATGCGCAAGCTGAAGAAAAATGAGCATGGAGAATAA", + "dna_sequence_length": 1449, + "functions": [ + "uric acid permease" + ], + "id": "CDS_2844", + "location": [ + [ + "NC_000913", + 3031367, + "+", + 1449 + ] + ], + "md5": "ac3ff118a18fb8919cf5e8f2798aebcc", + "parent_gene": "", + "protein_md5": "dcb56ab24fbe0d67496b35a5bb0bdf9a", + "protein_translation": "MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE", + "protein_translation_length": 482, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4499" + ], + [ + "gene_synonym", + "EcoGene:EG14489" + ], + [ + "gene_synonym", + "GI:226524745" + ], + [ + "gene_synonym", + "GeneID:7751638" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P614" + ], + [ + "gene_synonym", + "YP_002791254.1" + ], + [ + "gene_synonym", + "b4684" + ], + [ + "gene_synonym", + "yqfG" + ] + ], + "dna_sequence": "ATGAATTTTTTAATGCGCGCTATATTCAGTCTGTTGTTGCTTTTTACTCTCTCTATTCCTGTCATTTCTGACTGTGTTGCAATGGCCATTGAAAGTCGCTTCAAATATATGATGCTACTTTTTTAA", + "dna_sequence_length": 126, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2845", + "location": [ + [ + "NC_000913", + 3032817, + "+", + 126 + ] + ], + "md5": "f690aad51ee96e5b0821a43fed4d6f8c", + "parent_gene": "", + "protein_md5": "82ca49438c419af6e9e288df4d72ba66", + "protein_translation": "MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF", + "protein_translation_length": 41, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009484" + ], + [ + "gene_synonym", + "ECK2884" + ], + [ + "gene_synonym", + "EcoGene:EG13072" + ], + [ + "gene_synonym", + "GI:16130791" + ], + [ + "gene_synonym", + "GeneID:949020" + ], + [ + "gene_synonym", + "JW2857" + ], + [ + "gene_synonym", + "NP_417365.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46822" + ], + [ + "gene_synonym", + "b2889" + ], + [ + "gene_synonym", + "idi" + ], + [ + "gene_synonym", + "ygfV" + ] + ], + "dna_sequence": "ATGCAAACGGAACACGTCATTTTATTGAATGCACAGGGAGTTCCCACGGGTACGCTGGAAAAGTATGCCGCACACACGGCAGACACCCGCTTACATCTCGCGTTCTCCAGTTGGCTGTTTAATGCCAAAGGACAATTATTAGTTACCCGCCGCGCACTGAGCAAAAAAGCATGGCCTGGCGTGTGGACTAACTCGGTTTGTGGGCACCCACAACTGGGAGAAAGCAACGAAGACGCAGTGATCCGCCGTTGCCGTTATGAGCTTGGCGTGGAAATTACGCCTCCTGAATCTATCTATCCTGACTTTCGCTACCGCGCCACCGATCCGAGTGGCATTGTGGAAAATGAAGTGTGTCCGGTATTTGCCGCACGCACCACTAGTGCGTTACAGATCAATGATGATGAAGTGATGGATTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAATAA", + "dna_sequence_length": 549, + "functions": [ + "isopentenyl diphosphate isomerase" + ], + "id": "CDS_2846", + "location": [ + [ + "NC_000913", + 3033065, + "+", + 549 + ] + ], + "md5": "3f4584c774e864ca2eab4a32fe08c346", + "parent_gene": "", + "protein_md5": "8078ace0f4e9c5b402c1352a8af47c25", + "protein_translation": "MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARKRLSAFTQLK", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009486" + ], + [ + "gene_synonym", + "ECK2885" + ], + [ + "gene_synonym", + "EcoGene:EG10552" + ], + [ + "gene_synonym", + "GI:16130792" + ], + [ + "gene_synonym", + "GeneID:947372" + ], + [ + "gene_synonym", + "JW2858" + ], + [ + "gene_synonym", + "NP_417366.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8N3" + ], + [ + "gene_synonym", + "asuD" + ], + [ + "gene_synonym", + "b2890" + ], + [ + "gene_synonym", + "herC" + ], + [ + "gene_synonym", + "lysS" + ] + ], + "dna_sequence": "ATGTCTGAACAACACGCACAGGGCGCTGACGCGGTAGTCGATCTTAACAATGAACTGAAAACGCGTCGTGAGAAGCTGGCGAACCTGCGCGAGCAGGGGATTGCCTTCCCGAACGATTTCCGTCGCGATCATACCTCTGACCAATTGCACGCAGAATTCGACGGCAAAGAGAACGAAGAACTGGAAGCGCTGAACATCGAAGTCGCCGTTGCTGGCCGCATGATGACCCGTCGTATTATGGGTAAAGCGTCTTTCGTTACCCTGCAGGACGTTGGCGGTCGCATTCAGCTGTACGTTGCCCGTGACGATCTCCCGGAAGGCGTTTATAACGAGCAGTTCAAAAAATGGGACCTCGGCGACATCCTCGGCGCGAAAGGTAAGCTGTTCAAAACCAAAACCGGCGAACTGTCTATCCACTGCACCGAGTTGCGTCTGCTGACCAAAGCACTGCGTCCGCTGCCGGATAAATTCCACGGCTTGCAGGATCAGGAAGCGCGCTATCGTCAGCGTTATCTCGATCTCATCTCCAACGATGAATCCCGCAACACCTTTAAAGTGCGCTCGCAGATCCTCTCTGGTATTCGCCAGTTCATGGTGAACCGCGGCTTTATGGAAGTTGAAACGCCGATGATGCAGGTGATCCCTGGCGGTGCCGCTGCGCGTCCGTTTATCACCCACCATAACGCGCTGGATCTCGACATGTACCTGCGTATCGCGCCGGAACTGTACCTCAAGCGTCTGGTGGTTGGTGGCTTCGAGCGTGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGTATTTCCGTACGTCATAACCCAGAGTTCACCATGATGGAACTCTACATGGCTTACGCAGATTACAAAGATCTGATCGAGCTGACCGAATCGCTGTTCCGTACTCTGGCACAGGATATTCTCGGTAAGACGGAAGTGACCTACGGCGACGTGACGCTGGACTTCGGTAAACCGTTCGAAAAACTGACCATGCGTGAAGCGATCAAGAAATATCGCCCGGAAACCGACATGGCGGATCTGGACAACTTCGACTCTGCGAAAGCAATTGCTGAATCTATCGGCATCCACGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTTACCGAGATCTTCGAAGAAGTGGCAGAAGCACATCTGATTCAGCCGACCTTCATTACTGAATATCCGGCAGAAGTTTCTCCGCTGGCGCGTCGTAACGACGTTAACCCGGAAATCACAGACCGCTTTGAGTTCTTCATTGGTGGTCGTGAAATCGGTAACGGCTTTAGCGAGCTGAATGACGCGGAAGATCAGGCGCAACGCTTCCTGGATCAGGTTGCCGCGAAAGACGCAGGTGACGACGAAGCGATGTTCTACGATGAAGATTACGTCACCGCACTGGAACATGGCTTACCGCCGACAGCAGGTCTGGGAATTGGTATCGACCGTATGGTAATGCTGTTCACCAACAGCCATACCATCCGCGACGTTATTCTGTTCCCGGCGATGCGTCCGGTAAAATAA", + "dna_sequence_length": 1518, + "functions": [ + "lysine tRNA synthetase, constitutive" + ], + "id": "CDS_2847", + "location": [ + [ + "NC_000913", + 3035174, + "-", + 1518 + ] + ], + "md5": "01531fdf1522cc9ac4db973dfaa57296", + "parent_gene": "", + "protein_md5": "94de208da804ca385f33570c2fb3ac2d", + "protein_translation": "MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK", + "protein_translation_length": 505, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009488" + ], + [ + "gene_synonym", + "ECK2886" + ], + [ + "gene_synonym", + "EcoGene:EG10762" + ], + [ + "gene_synonym", + "GI:16130793" + ], + [ + "gene_synonym", + "GeneID:947369" + ], + [ + "gene_synonym", + "JW5847" + ], + [ + "gene_synonym", + "NP_417367.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07012" + ], + [ + "gene_synonym", + "b2891" + ], + [ + "gene_synonym", + "prfB" + ], + [ + "gene_synonym", + "supK" + ] + ], + "dna_sequence": "ATGTTTGAAATTAATCCGGTAAATAATCGCATTCAGGACCTCACGGAACGCTCCGACGTTCTTAGGGGGTATCTTGACTACGACGCCAAGAAAGAGCGTCTGGAAGAAGTAAACGCCGAGCTGGAACAGCCGGATGTCTGGAACGAACCCGAACGCGCACAGGCGCTGGGTAAAGAGCGTTCCTCCCTCGAAGCCGTTGTCGACACCCTCGACCAAATGAAACAGGGGCTGGAAGATGTTTCTGGTCTGCTGGAACTGGCTGTAGAAGCTGACGACGAAGAAACCTTTAACGAAGCCGTTGCTGAACTCGACGCCCTGGAAGAAAAACTGGCGCAGCTTGAGTTCCGCCGTATGTTCTCTGGCGAATATGACAGCGCCGACTGCTACCTCGATATTCAGGCGGGGTCTGGCGGTACGGAAGCACAGGACTGGGCGAGCATGCTTGAGCGTATGTATCTGCGCTGGGCAGAATCGCGTGGTTTCAAAACTGAAATCATCGAAGAGTCGGAAGGTGAAGTGGCGGGTATTAAATCCGTGACGATCAAAATCTCCGGCGATTACGCTTACGGCTGGCTGCGTACAGAAACCGGCGTTCACCGCCTGGTGCGTAAAAGCCCGTTTGACTCCGGCGGTCGTCGCCACACGTCGTTCAGCTCCGCGTTTGTTTATCCGGAAGTTGATGATGATATTGATATCGAAATCAACCCGGCGGATCTGCGCATTGACGTTTATCGCACGTCCGGCGCGGGCGGTCAGCACGTTAACCGTACCGAATCTGCGGTGCGTATTACCCACATCCCGACCGGGATCGTGACCCAGTGCCAGAACGACCGTTCCCAGCACAAGAACAAAGATCAGGCCATGAAGCAGATGAAAGCGAAGCTTTATGAACTGGAGATGCAGAAGAAAAATGCCGAGAAACAGGCGATGGAAGATAACAAATCCGACATCGGCTGGGGCAGCCAGATTCGTTCTTATGTCCTTGATGACTCCCGCATTAAAGATCTGCGCACCGGGGTAGAAACCCGCAACACGCAGGCCGTGCTGGACGGCAGCCTGGATCAATTTATCGAAGCAAGTTTGAAAGCAGGGTTATGA", + "dna_sequence_length": 1098, + "functions": [ + "peptide chain release factor RF-2" + ], + "id": "CDS_2848", + "location": [ + [ + "NC_000913", + 3036282, + "-", + 75 + ], + [ + "NC_000913", + 3036206, + "-", + 1023 + ] + ], + "md5": "7466c2f6510b765ee8fee6f55c643656", + "parent_gene": "", + "protein_md5": "1be8f6b8ebe6be6e9851cf096fc1f6ab", + "protein_translation": "MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL", + "protein_translation_length": 365, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009492" + ], + [ + "gene_synonym", + "ECK2887" + ], + [ + "gene_synonym", + "EcoGene:EG10830" + ], + [ + "gene_synonym", + "GI:16130794" + ], + [ + "gene_synonym", + "GeneID:947367" + ], + [ + "gene_synonym", + "JW2860" + ], + [ + "gene_synonym", + "NP_417368.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21893" + ], + [ + "gene_synonym", + "b2892" + ], + [ + "gene_synonym", + "recJ" + ] + ], + "dna_sequence": "GTGAAACAACAGATACAACTTCGTCGCCGTGAAGTCGATGAAACGGCAGACTTGCCCGCTGAATTGCCTCCCTTGCTGCGCCGTTTATACGCCAGCCGGGGAGTACGCAGTGCGCAAGAACTGGAACGCAGTGTTAAAGGTATGCTGCCCTGGCAGCAACTGAGCGGCGTCGAAAAGGCCGTTGAGATCCTTTACAACGCTTTTCGCGAAGGAACGCGGATTATTGTGGTCGGTGATTTCGACGCCGACGGCGCGACCAGCACGGCTCTAAGCGTGCTGGCGATGCGCTCGCTTGGTTGCAGCAATATCGACTACCTGGTACCAAACCGTTTCGAAGACGGTTACGGCTTAAGCCCGGAAGTGGTCGATCAGGCCCATGCCCGTGGCGCGCAGTTAATTGTCACGGTGGATAACGGTATTTCCTCCCATGCGGGGGTTGAGCACGCTCGCTCGTTGGGCATCCCGGTTATTGTTACCGATCACCATTTGCCAGGCGACACATTACCCGCAGCGGAAGCGATCATTAACCCTAACTTGCGCGACTGTAATTTCCCGTCGAAATCACTGGCAGGCGTGGGTGTGGCGTTTTATCTGATGCTGGCGCTGCGCACCTTTTTGCGCGATCAGGGCTGGTTTGATGAGCGTAACATCGCAATTCCTAACCTGGCAGAACTGCTGGATCTGGTCGCGCTGGGGACAGTGGCGGACGTCGTGCCGCTGGACGCTAATAATCGCATTCTGACCTGGCAGGGGATGAGTCGCATCCGAGCCGGAAAGTGCCGTCCGGGGATTAAAGCGCTGCTTGAAGTGGCAAACCGTGATGCACAAAAACTCGCCGCCAGCGATTTAGGTTTTGCGCTGGGGCCACGTCTCAATGCTGCCGGACGACTGGACGATATGTCCGTCGGTGTGGCGCTGTTGTTGTGCGACAACATCGGCGAAGCGCGCGTGCTGGCAAATGAACTCGATGCGCTAAACCAGACGCGAAAAGAGATCGAACAAGGAATGCAAATTGAAGCCCTGACCCTGTGCGAGAAACTGGAGCGCAGCCGTGACACGCTACCCGGCGGGCTGGCAATGTATCACCCCGAATGGCATCAGGGCGTTGTCGGTATTCTGGCTTCGCGCATCAAAGAGCGTTTTCACCGTCCGGTTATCGCGTTTGCGCCAGCAGGTGACGGTACGCTGAAAGGTTCCGGTCGCTCCATTCAGGGGCTGCATATGCGTGATGCGCTGGAGCGATTAGACACACTCTACCCTGGCATGATGCTGAAGTTTGGCGGTCATGCGATGGCGGCGGGTTTGTCGCTGGAAGAGGATAAATTCAAACTCTTTCAACAACGGTTTGGCGAACTGGTTACTGAGTGGCTGGACCCTTCGCTATTGCAAGGCGAAGTGGTATCAGACGGTCCGTTAAGCCCGGCCGAAATGACCATGGAAGTGGCGCAGCTGCTGCGCGATGCTGGCCCGTGGGGGCAGATGTTCCCGGAGCCGCTGTTTGACGGTCATTTCCGTCTGCTGCAACAGCGGCTGGTGGGCGAACGTCATTTGAAGGTGATGGTCGAACCGGTCGGCGGCGGTCCACTGCTGGATGGTATTGCTTTTAATGTCGATACCGCCCTCTGGCCGGATAACGGCGTGCGCGAAGTGCAACTGGCTTATAAGCTCGATATCAACGAGTTTCGCGGCAACCGCAGCCTGCAAATTATCATCGACAATATCTGGCCAATTTAG", + "dna_sequence_length": 1734, + "functions": [ + "ssDNA exonuclease, 5' --> 3'-specific" + ], + "id": "CDS_2849", + "location": [ + [ + "NC_000913", + 3038106, + "-", + 1734 + ] + ], + "md5": "241c2ed9d5827647a797adaafe640285", + "parent_gene": "", + "protein_md5": "bf498d79619b0d45f97b1247e244acff", + "protein_translation": "MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERNIAIPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFKLFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI", + "protein_translation_length": 577, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009494" + ], + [ + "gene_synonym", + "ECK2888" + ], + [ + "gene_synonym", + "EcoGene:EG11070" + ], + [ + "gene_synonym", + "GI:16130795" + ], + [ + "gene_synonym", + "GeneID:947363" + ], + [ + "gene_synonym", + "JW2861" + ], + [ + "gene_synonym", + "NP_417369.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEG6" + ], + [ + "gene_synonym", + "b2893" + ], + [ + "gene_synonym", + "dsbC" + ], + [ + "gene_synonym", + "xprA" + ] + ], + "dna_sequence": "ATGAAGAAAGGTTTTATGTTGTTTACTTTGTTAGCGGCGTTTTCAGGCTTTGCTCAGGCTGATGACGCGGCAATTCAACAAACGTTAGCCAAAATGGGCATCAAAAGCAGCGATATTCAGCCCGCGCCTGTAGCTGGCATGAAGACAGTTCTGACTAACAGCGGCGTGTTGTACATCACCGATGATGGTAAACATATCATTCAGGGGCCAATGTATGACGTTAGTGGCACGGCTCCGGTCAATGTCACCAATAAGATGCTGTTAAAGCAGTTGAATGCGCTTGAAAAAGAGATGATCGTTTATAAAGCGCCGCAGGAAAAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAACGCGCTGGGGATCACCGTGCGTTATCTTGCTTTCCCGCGCCAGGGGCTGGACAGCGATGCAGAGAAAGAAATGAAAGCTATCTGGTGTGCGAAAGATAAAAACAAAGCGTTTGATGATGTGATGGCAGGTAAAAGCGTCGCACCAGCCAGTTGCGACGTGGATATTGCCGACCATTACGCACTTGGCGTCCAGCTTGGCGTTAGCGGTACTCCGGCAGTTGTGCTGAGCAATGGCACACTTGTTCCGGGTTACCAGCCGCCGAAAGAGATGAAAGAATTCCTCGACGAACACCAAAAAATGACCAGCGGTAAATAA", + "dna_sequence_length": 711, + "functions": [ + "protein disulfide isomerase II" + ], + "id": "CDS_2850", + "location": [ + [ + "NC_000913", + 3038822, + "-", + 711 + ] + ], + "md5": "31a412ef536f1f7b609b98f47418144b", + "parent_gene": "", + "protein_md5": "f57c9a3f968e1c498a2475a37bf5b8d9", + "protein_translation": "MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKEMKEFLDEHQKMTSGK", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009500" + ], + [ + "gene_synonym", + "ECK2889" + ], + [ + "gene_synonym", + "EcoGene:EG11071" + ], + [ + "gene_synonym", + "GI:16130796" + ], + [ + "gene_synonym", + "GeneID:947362" + ], + [ + "gene_synonym", + "JW2862" + ], + [ + "gene_synonym", + "NP_417370.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8P8" + ], + [ + "gene_synonym", + "b2894" + ], + [ + "gene_synonym", + "xerD" + ], + [ + "gene_synonym", + "xprB" + ] + ], + "dna_sequence": "GTGAAACAGGATCTGGCACGCATCGAGCAGTTTCTTGATGCTCTGTGGCTGGAAAAAAATCTGGCTGAAAATACGTTGAACGCTTACCGTCGCGATCTGTCAATGATGGTGGAGTGGTTGCATCACCGCGGGTTGACGCTGGCGACGGCGCAAAGTGACGATTTGCAGGCATTACTGGCAGAACGGCTGGAGGGCGGGTATAAAGCCACCAGCTCAGCGCGTTTGCTGAGTGCAGTGCGCCGATTGTTCCAGTATCTTTATCGCGAAAAGTTTCGTGAAGACGATCCCAGTGCGCATCTCGCTTCACCGAAATTGCCCCAGCGTTTGCCAAAAGATTTAAGCGAAGCGCAGGTCGAACGTTTATTACAGGCACCATTAATCGATCAGCCACTGGAGCTACGCGATAAAGCCATGCTTGAAGTGTTGTATGCTACCGGGCTGCGTGTCTCTGAACTGGTCGGACTGACAATGAGTGATATCAGCCTGCGTCAGGGCGTGGTACGGGTCATTGGTAAAGGCAACAAAGAGCGTCTGGTGCCGTTAGGTGAAGAGGCGGTTTACTGGCTGGAAACCTATCTGGAACATGGGCGTCCGTGGCTGCTGAATGGTGTGTCAATTGACGTGTTGTTTCCCAGCCAGCGTGCGCAGCAGATGACGCGACAGACCTTCTGGCACCGTATTAAACATTATGCTGTGCTGGCGGGTATCGACAGCGAAAAGCTGTCACCGCATGTGTTGCGTCACGCTTTTGCCACTCATTTATTAAATCATGGTGCGGATTTACGCGTGGTGCAGATGCTACTGGGCCACAGCGATCTCTCCACCACGCAAATTTATACGCATGTCGCTACCGAGCGTCTGCGGCAACTTCATCAACAGCATCACCCGCGGGCGTGA", + "dna_sequence_length": 897, + "functions": [ + "site-specific tyrosine recombinase" + ], + "id": "CDS_2851", + "location": [ + [ + "NC_000913", + 3039743, + "-", + 897 + ] + ], + "md5": "fdf9a9e1a4b3ad7dc0e3bb3e7fcd71f6", + "parent_gene": "", + "protein_md5": "19bb021c0872a75af1e5c41f8abfa908", + "protein_translation": "MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009503" + ], + [ + "gene_synonym", + "ECK2890" + ], + [ + "gene_synonym", + "EcoGene:EG12697" + ], + [ + "gene_synonym", + "GI:16130797" + ], + [ + "gene_synonym", + "GeneID:947361" + ], + [ + "gene_synonym", + "JW2863" + ], + [ + "gene_synonym", + "NP_417371.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABY4" + ], + [ + "gene_synonym", + "b2895" + ], + [ + "gene_synonym", + "fldB" + ] + ], + "dna_sequence": "ATGAATATGGGTCTTTTTTACGGTTCCAGCACCTGTTACACCGAAATGGCGGCAGAAAAAATCCGCGATATTATCGGCCCAGAACTGGTGACCTTACATAACCTCAAGGACGACTCCCCGAAATTAATGGAGCAGTACGATGTGCTCATTCTGGGTATCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTCGACGACCTGAACCTTGAAGGTAAAATTGTTGCGCTGTATGGGCTTGGCGATCAACTGGGATACGGCGAGTGGTTCCTCGATGCGCTCGGTATGCTGCATGACAAACTCTCGACCAAAGGCGTGAAGTTCGTCGGCTACTGGCCAACGGAAGGATATGAATTTACCAGCCCGAAACCGGTGATTGCTGACGGGCAACTGTTCGTGGGTCTGGCGCTGGATGAAACTAACCAGTATGACCTTAGCGACGAGCGTATTCAGAGCTGGTGCGAGCAAATCCTCAACGAAATGGCAGAGCATTACGCCTGA", + "dna_sequence_length": 522, + "functions": [ + "flavodoxin 2" + ], + "id": "CDS_2852", + "location": [ + [ + "NC_000913", + 3039855, + "+", + 522 + ] + ], + "md5": "b09812f667492de05dce6d4f02079cdd", + "parent_gene": "", + "protein_md5": "bdb84d882dd9a33c97d64ebed39a9242", + "protein_translation": "MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009505" + ], + [ + "gene_synonym", + "ECK2891" + ], + [ + "gene_synonym", + "EcoGene:EG13074" + ], + [ + "gene_synonym", + "GI:16130798" + ], + [ + "gene_synonym", + "GeneID:947379" + ], + [ + "gene_synonym", + "JW2864" + ], + [ + "gene_synonym", + "NP_417372.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46824" + ], + [ + "gene_synonym", + "b2896" + ], + [ + "gene_synonym", + "cptA" + ], + [ + "gene_synonym", + "pigV" + ], + [ + "gene_synonym", + "ygfX" + ] + ], + "dna_sequence": "GTGGTCCTGTGGCAATCTGATTTGCGCGTCTCCTGGCGCGCACAGTGGCTTTCCTTGCTGATTCATGGGCTGGTTGCCGCTGTTATTTTACTCATGCCCTGGCCACTCAGTTACACCCCGTTATGGATGGTGTTACTTTCGCTGGTGGTGTTTGATTGCGTTCGCAGCCAGCGGCGTATTAATGCTCGCCAGGGGGAAATTCGCTTGTTGATGGACGGGCGTTTGCGTTGGCAAGGGCAGGAGTGGAGCATCGTCAAAGCACCGTGGATGATTAAGAGCGGCATGATGCTGCGTTTACGTTCTGATGGCGGTAAACGGCAACATTTATGGCTGGCAGCCGACAGCATGGACGAAGCTGAATGGCGGGATTTACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAA", + "dna_sequence_length": 408, + "functions": [ + "toxin of CptAB toxin-antitoxin pair" + ], + "id": "CDS_2853", + "location": [ + [ + "NC_000913", + 3040823, + "-", + 408 + ] + ], + "md5": "a6d07df873ab0b4ed654155584395ff6", + "parent_gene": "", + "protein_md5": "040999cfac27ed1554dd577503fef9d8", + "protein_translation": "MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR", + "protein_translation_length": 135, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009507" + ], + [ + "gene_synonym", + "ECK2892" + ], + [ + "gene_synonym", + "EcoGene:EG13075" + ], + [ + "gene_synonym", + "GI:16130799" + ], + [ + "gene_synonym", + "GeneID:947382" + ], + [ + "gene_synonym", + "JW2865" + ], + [ + "gene_synonym", + "NP_417373.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64559" + ], + [ + "gene_synonym", + "b2897" + ], + [ + "gene_synonym", + "cptB" + ], + [ + "gene_synonym", + "sdhE" + ], + [ + "gene_synonym", + "ygfY" + ] + ], + "dna_sequence": "ATGGACATTAACAACAAAGCCCGCATTCATTGGGCATGCCGCCGTGGTATGCGCGAACTCGATATTTCAATCATGCCGTTTTTCGAACATGAGTACGACAGCTTAAGCGATGACGAAAAACGCATCTTTATTCGTCTGCTGGAATGTGACGATCCGGACCTGTTTAACTGGCTGATGAATCACGGTAAACCGGCCGATGCAGAACTGGAAATGATGGTCCGACTCATCCAGACACGGAACCGGGAACGTGGTCCTGTGGCAATCTGA", + "dna_sequence_length": 267, + "functions": [ + "flavinator of succinate dehydrogenase", + "antitoxin of CptAB toxin-antitoxin pair" + ], + "id": "CDS_2854", + "location": [ + [ + "NC_000913", + 3041070, + "-", + 267 + ] + ], + "md5": "b330dd0d8d2ee457f81455b137815914", + "parent_gene": "", + "protein_md5": "9c8f7929d68cfe51e355a10748a5d223", + "protein_translation": "MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI", + "protein_translation_length": 88, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009512" + ], + [ + "gene_synonym", + "ECK2893" + ], + [ + "gene_synonym", + "EcoGene:EG12685" + ], + [ + "gene_synonym", + "GI:16130800" + ], + [ + "gene_synonym", + "GeneID:947384" + ], + [ + "gene_synonym", + "JW2866" + ], + [ + "gene_synonym", + "NP_417374.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE8" + ], + [ + "gene_synonym", + "b2898" + ], + [ + "gene_synonym", + "ygfZ" + ], + [ + "gene_synonym", + "yzzW" + ] + ], + "dna_sequence": "ATGGCTTTTACACCTTTTCCTCCCCGTCAGCCTACGGCTTCTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGCCAGACGACGAGCGTGTGCTGCTTGGTGTTGCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTAACCGATGAAGCTACTGCTAATATGCTGACCGATAAACTGCGCGGTGAAGCGGAACTGAACAATAGCCAACAGTGGCTGGCATTAAACATTGAAGCGGGTTTCCCGGTGATTGATGCCGCCAACAGCGGGCAGTTTATCCCACAGGCGACCAATCTCCAGGCGCTGGGCGGTATCAGCTTTAAGAAAGGCTGTTATACCGGACAAGAGATGGTGGCGCGAGCAAAATTCCGTGGTGCCAATAAACGTGCGCTCTGGTTGCTGGCAGGTAGCGCCAGCCGACTGCCGGAAGCTGGTGAAGACTTAGAGCTGAAAATGGGCGAGAACTGGCGTCGTACCGGTACGGTACTGGCTGCGGTAAAACTGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAA", + "dna_sequence_length": 981, + "functions": [ + "iron-sulfur cluster repair protein, plumbagin resistance" + ], + "id": "CDS_2855", + "location": [ + [ + "NC_000913", + 3041313, + "+", + 981 + ] + ], + "md5": "d51e021b7ee1f55ea009e61077e3f46f", + "parent_gene": "", + "protein_md5": "9c4f16883ddbb1922d15f77e1284e619", + "protein_translation": "MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009515" + ], + [ + "gene_synonym", + "ECK2894" + ], + [ + "gene_synonym", + "EcoGene:EG13077" + ], + [ + "gene_synonym", + "GI:16130801" + ], + [ + "gene_synonym", + "GeneID:947381" + ], + [ + "gene_synonym", + "JW2867" + ], + [ + "gene_synonym", + "NP_417375.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67153" + ], + [ + "gene_synonym", + "b2899" + ], + [ + "gene_synonym", + "yqfA" + ] + ], + "dna_sequence": "ATGGTTCAGAAGCCCCTCATTAAGCAGGGATATTCACTGGCAGAGGAAATAGCCAACAGCGTCAGTCACGGCATTGGGTTGGTGTTTGGTATCGTTGGGCTGGTGTTGCTACTGGTTCAGGCGGTGGATCTTAATGCCAGCGCCACAGCGATAACCAGCTACAGCCTCTATGGCGGCAGTATGATCCTGCTGTTCCTCGCTTCGACGCTCTATCACGCCATTCCTCATCAACGGGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCTATTTACCTGTTGATTGCCGGAACCTACACGCCGTTTTTGCTGGTGGGGCTGGATTCTCCGTTAGCGCGCGGGTTGATGATTGTTATCTGGAGCCTGGCATTGCTGGGTATTCTGTTTAAACTGACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAA", + "dna_sequence_length": 660, + "functions": [ + "hemolysin III family HylIII inner membrane protein" + ], + "id": "CDS_2856", + "location": [ + [ + "NC_000913", + 3043148, + "-", + 660 + ] + ], + "md5": "505440135743e4e535b02356978913d1", + "parent_gene": "", + "protein_md5": "e0325ef50a69a1d0c677adb2e29fff2d", + "protein_translation": "MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009518" + ], + [ + "gene_synonym", + "ECK2895" + ], + [ + "gene_synonym", + "EcoGene:EG13078" + ], + [ + "gene_synonym", + "GI:16130802" + ], + [ + "gene_synonym", + "GeneID:947380" + ], + [ + "gene_synonym", + "JW2868" + ], + [ + "gene_synonym", + "NP_417376.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67603" + ], + [ + "gene_synonym", + "b2900" + ], + [ + "gene_synonym", + "yqfB" + ] + ], + "dna_sequence": "ATGCAGCCAAACGACATCACTTTTTTTCAACGTTTCCAGGATGACATTCTGGCTGGGCGTAAAACCATCACCATCCGCGACGAGTCTGAATCGCACTTCAAAACGGGTGATGTGCTTCGTGTCGGACGTTTTGAAGATGACGGTTATTTTTGCACGATTGAAGTCACCGCAACCTCAACCGTAACGCTGGATACGCTGACTGAAAAACATGCAGAGCAGGAAAATATGACCCTGACTGAACTGAAAAAAGTCATTGCTGACATCTATCCCGGTCAGACACAATTTTATGTGATTGAATTTAAATGTCTTTAA", + "dna_sequence_length": 312, + "functions": [ + "UPF0267 family protein" + ], + "id": "CDS_2857", + "location": [ + [ + "NC_000913", + 3043623, + "-", + 312 + ] + ], + "md5": "5c7b636fef3b05863bf70919ffcce86a", + "parent_gene": "", + "protein_md5": "30c48302e638b3496e2461afa67977b4", + "protein_translation": "MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFEDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELKKVIADIYPGQTQFYVIEFKCL", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009523" + ], + [ + "gene_synonym", + "ECK2896" + ], + [ + "gene_synonym", + "EcoGene:EG13079" + ], + [ + "gene_synonym", + "GI:16130803" + ], + [ + "gene_synonym", + "GeneID:947378" + ], + [ + "gene_synonym", + "JW2869" + ], + [ + "gene_synonym", + "NP_417377.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46829" + ], + [ + "gene_synonym", + "b2901" + ], + [ + "gene_synonym", + "bglA" + ], + [ + "gene_synonym", + "bglD" + ], + [ + "gene_synonym", + "yqfC" + ] + ], + "dna_sequence": "ATGATAGTGAAAAAACTCACCTTACCGAAAGATTTCTTATGGGGCGGCGCAGTTGCCGCTCATCAGGTCGAAGGCGGCTGGAACAAAGGCGGAAAAGGGCCGAGCATTTGTGACGTTCTGACCGGTGGCGCACACGGCGTGCCGCGCGAAATCACCAAAGAAGTCTTGCCAGGAAAATACTATCCAAACCATGAAGCCGTTGATTTTTATGGTCACTATAAGGAAGACATCAAGCTATTTGCCGAAATGGGCTTCAAATGTTTTCGTACATCCATTGCCTGGACGCGCATTTTTCCAAAAGGCGATGAAGCTCAGCCAAACGAAGAAGGGCTGAAGTTCTACGATGATATGTTCGATGAACTGCTGAAATACAACATCGAACCGGTGATCACCCTCTCCCACTTTGAAATGCCGCTGCATCTGGTGCAGCAATACGGTAGCTGGACCAACCGTAAAGTGGTTGATTTCTTTGTACGTTTCGCGGAAGTGGTATTTGAACGCTATAAGCACAAAGTCAAATACTGGATGACCTTCAACGAAATTAACAACCAGCGTAACTGGCGTGCACCGCTGTTCGGTTACTGCTGCTCCGGCGTGGTGTATACCGAGCATGAAAACCCGGAAGAGACGATGTATCAGGTGCTGCATCACCAGTTTGTCGCCAGCGCCCTGGCGGTGAAAGCTGCGCGTCGCATTAACCCGGAGATGAAAGTCGGCTGTATGCTGGCGATGGTGCCGCTCTATCCTTACTCCTGTAACCCGGACGATGTGATGTTCGCTCAGGAGTCGATGCGCGAACGCTACGTCTTTACCGATGTGCAGCTACGCGGCTATTACCCGTCCTATGTGTTGAACGAGTGGGAGCGTCGCGGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATCCAGTAGGTCTGCGCTATGCACTTTGCGAACTGTATGAGCGTTATCAGAGGCCGCTGTTTATTGTCGAAAACGGTTTTGGCGCTTACGACAAAGTGGAAGAAGATGGCAGCATCAACGACGACTACCGCATTGACTACCTGCGCGCCCATATCGAAGAGATGAAAAAAGCGGTGACTTACGATGGCGTGGATCTGATGGGCTACACACCGTGGGGCTGCATCGACTGCGTGTCGTTCACCACCGGGCAGTACAGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAA", + "dna_sequence_length": 1440, + "functions": [ + "6-phospho-beta-glucosidase A" + ], + "id": "CDS_2858", + "location": [ + [ + "NC_000913", + 3043662, + "+", + 1440 + ] + ], + "md5": "9e793f4bc5dc374388c7514332e8787c", + "parent_gene": "", + "protein_md5": "4086e8f619f3fe85476e0cf86edea088", + "protein_translation": "MIVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGEKL", + "protein_translation_length": 479, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009526" + ], + [ + "gene_synonym", + "ECK2897" + ], + [ + "gene_synonym", + "EcoGene:EG12971" + ], + [ + "gene_synonym", + "GI:16130804" + ], + [ + "gene_synonym", + "GeneID:947373" + ], + [ + "gene_synonym", + "JW2870" + ], + [ + "gene_synonym", + "NP_417378.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52037" + ], + [ + "gene_synonym", + "b2902" + ], + [ + "gene_synonym", + "ygfF" + ], + [ + "gene_synonym", + "yqfD" + ] + ], + "dna_sequence": "ATGGCTATAGCACTTGTGACTGGTGGCAGTCGCGGCATCGGGCGGGCAACTGCATTACTGTTGGCGCAAGAAGGGTATACGGTGGCGGTTAATTATCAGCAAAACCTCCACGCGGCGCAGGAAGTGATGAACTTAATAACGCAAGCCGGTGGCAAAGCATTCGTGCTCCAGGCGGATATCAGCGACGAAAACCAGGTCGTTGCGATGTTTACAGCAATCGATCAGCACGATGAACCGCTAGCAGCGCTGGTCAATAACGCCGGGATCTTGTTTACCCAGTGCACCGTTGAAAACCTTACCGCAGAGCGAATCAACCGAGTACTTTCCACCAACGTGACGGGATATTTTCTCTGCTGCCGCGAGGCGGTAAAACGCATGGCGCTTAAAAATGGTGGCAGTGGCGGCGCTATCGTCAATGTCTCTTCGGTGGCCTCACGGTTGGGTTCGCCAGGGGAATATGTTGATTACGCGGCATCGAAAGGGGCGATTGATACGTTAACCACCGGACTATCGCTGGAAGTCGCCGCGCAGGGGATCCGCGTTAACTGCGTGCGGCCAGGGTTTATTTATACCGAAATGCACGCCAGCGGCGGCGAGCCTGGACGCGTCGATCGCGTTAAGTCGAACATCCCCATGCAGCGTGGTGGACAGGCAGAAGAGGTCGCGCAGGCCATTGTCTGGCTACTAAGTGATAAAGCCTCTTACGTCACGGGAAGTTTTATCGATTTGGCGGGCGGGAAATAA", + "dna_sequence_length": 744, + "functions": [ + "putative NAD(P)-dependent oxidoreductase" + ], + "id": "CDS_2859", + "location": [ + [ + "NC_000913", + 3045901, + "-", + 744 + ] + ], + "md5": "8afaf7d16f761f683b24ec8ada5a77c3", + "parent_gene": "", + "protein_md5": "ccd6c0609ef3268c36678771b2f0f322", + "protein_translation": "MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFIDLAGGK", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009531" + ], + [ + "gene_synonym", + "ECK2898" + ], + [ + "gene_synonym", + "EcoGene:EG11810" + ], + [ + "gene_synonym", + "GI:16130805" + ], + [ + "gene_synonym", + "GeneID:947394" + ], + [ + "gene_synonym", + "JW2871" + ], + [ + "gene_synonym", + "NP_417379.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33195" + ], + [ + "gene_synonym", + "b2903" + ], + [ + "gene_synonym", + "gcvP" + ] + ], + "dna_sequence": "ATGACACAGACGTTAAGCCAGCTTGAAAACAGCGGCGCTTTTATTGAACGCCATATCGGACCGGACGCCGCGCAACAGCAAGAAATGCTGAATGCCGTTGGTGCACAATCGTTAAACGCGCTGACCGGCCAGATTGTGCCGAAAGATATTCAACTTGCGACACCACCGCAGGTTGGCGCACCGGCGACCGAATACGCCGCACTGGCAGAACTCAAGGCTATTGCCAGTCGCAATAAACGCTTCACGTCTTACATCGGCATGGGTTACACCGCCGTGCAGCTACCGCCGGTTATCCTGCGTAACATGCTGGAAAATCCGGGCTGGTATACCGCGTACACTCCGTATCAACCTGAAGTCTCCCAGGGCCGCCTTGAAGCACTGCTCAACTTCCAGCAGGTAACGCTGGATTTGACTGGACTGGATATGGCCTCTGCTTCTCTTCTGGACGAGGCCACCGCTGCCGCCGAAGCAATGGCGATGGCGAAACGCGTCAGCAAACTGAAAAATGCCAACCGCTTCTTCGTGGCTTCCGATGTGCATCCGCAAACGCTGGATGTGGTCCGTACTCGTGCCGAAACCTTTGGTTTTGAAGTGATTGTCGATGACGCGCAAAAAGTGCTCGACCATCAGGACGTCTTCGGCGTGCTGTTACAGCAGGTAGGCACTACCGGTGAAATTCACGACTACACTGCGCTTATTAGCGAACTGAAATCACGCAAAATTGTGGTCAGCGTTGCCGCCGATATTATGGCGCTGGTGCTGTTAACTGCGCCGGGTAAACAGGGCGCGGATATTGTTTTTGGTTCGGCGCAACGCTTCGGCGTGCCGATGGGCTACGGTGGCCCACACGCGGCATTCTTTGCGGCGAAAGATGAATACAAACGCTCAATGCCGGGCCGTATTATCGGTGTATCGAAAGATGCAGCTGGCAATACCGCGCTGCGCATGGCGATGCAGACTCGCGAGCAACATATCCGCCGTGAGAAAGCGAACTCCAACATTTGTACTTCCCAGGTACTGCTGGCAAACATCGCCAGCCTGTATGCCGTTTATCACGGCCCGGTTGGCCTGAAACGTATCGCTAACCGCATTCACCGTCTGACCGATATCCTGGCGGCGGGCCTGCAACAAAAAGGTCTGAAACTGCGCCATGCGCACTATTTCGACACCTTGTGTGTGGAAGTGGCCGACAAAGCGGGCGTACTGACGCGTGCCGAAGCGGCTGAAATCAACCTGCGTAGCGATATTCTGAACGCGGTTGGGATCACCCTTGATGAAACAACCACGCGTGAAAACGTAATGCAGCTTTTCAACGTGCTGCTGGGCGATAACCACGGCCTGGACATCGACACGCTGGACAAAGACGTGGCTCACGACAGCCGCTCTATCCAGCCTGCGATGCTGCGCGACGACGAAATCCTCACCCATCCGGTGTTTAATCGCTACCACAGCGAAACCGAAATGATGCGCTATATGCACTCGCTGGAGCGTAAAGATCTGGCGCTGAATCAGGCGATGATCCCGCTGGGTTCCTGCACCATGAAACTGAACGCCGCCGCCGAGATGATCCCAATCACCTGGCCGGAATTTGCCGAACTGCACCCGTTCTGCCCGCCGGAGCAGGCCGAAGGTTATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGTGAAACTGACCGGTTACGACGCCGTTTGTATGCAGCCGAACTCTGGCGCACAGGGCGAATACGCGGGCCTGCTGGCGATTCGTCATTATCATGAAAGCCGCAACGAAGGGCATCGCGATATCTGCCTGATCCCGGCTTCTGCGCACGGAACTAACCCCGCTTCTGCACATATGGCAGGAATGCAGGTGGTGGTTGTGGCGTGTGATAAAAACGGCAACATCGATCTGACTGATCTGCGCGCGAAAGCGGAACAGGCGGGCGATAACCTCTCCTGTATCATGGTGACTTATCCTTCTACCCACGGCGTGTATGAAGAAACGATCCGTGAAGTGTGTGAAGTCGTGCATCAGTTCGGCGGTCAGGTTTACCTTGATGGCGCGAACATGAACGCCCAGGTTGGCATCACCTCGCCGGGCTTTATTGGTGCGGACGTTTCACACCTTAACCTACATAAAACTTTCTGCATTCCGCACGGCGGTGGTGGTCCGGGTATGGGACCGATCGGCGTGAAAGCGCATTTGGCACCGTTTGTACCGGGTCATAGCGTGGTGCAAATCGAAGGCATGTTAACCCGTCAGGGCGCGGTTTCTGCGGCACCGTTCGGTAGCGCCTCTATCCTGCCAATCAGCTGGATGTACATCCGCATGATGGGCGCAGAAGGGCTGAAAAAAGCAAGCCAGGTGGCAATCCTCAACGCCAACTATATTGCCAGCCGCCTGCAGGATGCCTTCCCGGTGCTGTATACCGGTCGCGACGGTCGCGTGGCGCACGAATGTATTCTCGATATTCGCCCGCTGAAAGAAGAAACCGGCATCAGCGAGCTGGATATTGCCAAGCGCCTGATCGACTACGGTTTCCACGCGCCGACGATGTCGTTCCCGGTGGCGGGTACGCTGATGGTTGAACCGACTGAATCTGAAAGCAAAGTGGAACTGGATCGCTTTATCGACGCGATGCTGGCTATCCGCGCAGAAATTGACCAGGTGAAAGCCGGTGTCTGGCCGCTGGAAGATAACCCGCTGGTGAACGCGCCGCACATTCAGAGCGAACTGGTCGCCGAGTGGGCGCATCCGTACAGCCGTGAAGTTGCGGTATTCCCGGCAGGTGTGGCAGACAAATACTGGCCGACAGTGAAACGTCTGGATGATGTTTACGGCGACCGTAACCTGTTCTGCTCCTGCGTACCGATTAGCGAATACCAGTAA", + "dna_sequence_length": 2874, + "functions": [ + "glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex" + ], + "id": "CDS_2860", + "location": [ + [ + "NC_000913", + 3049041, + "-", + 2874 + ] + ], + "md5": "a6a2ca63ec786d58724c745b52dc4620", + "parent_gene": "", + "protein_md5": "4e97c2068758d0076cc2d47bb6638ecd", + "protein_translation": "MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFNVLLGDNHGLDIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ", + "protein_translation_length": 957, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009534" + ], + [ + "gene_synonym", + "ECK2899" + ], + [ + "gene_synonym", + "EcoGene:EG10371" + ], + [ + "gene_synonym", + "GI:16130806" + ], + [ + "gene_synonym", + "GeneID:947393" + ], + [ + "gene_synonym", + "JW2872" + ], + [ + "gene_synonym", + "NP_417380.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T9" + ], + [ + "gene_synonym", + "b2904" + ], + [ + "gene_synonym", + "gcvH" + ] + ], + "dna_sequence": "ATGAGCAACGTACCAGCAGAACTGAAATACAGCAAAGAACACGAATGGCTGCGTAAAGAAGCCGACGGCACTTACACCGTTGGTATTACCGAACATGCTCAGGAGCTGTTAGGCGATATGGTGTTTGTTGACCTGCCGGAAGTGGGCGCAACGGTTAGCGCGGGCGATGACTGCGCGGTTGCCGAATCGGTAAAAGCGGCGTCAGACATTTATGCGCCAGTAAGCGGTGAAATCGTGGCGGTAAACGACGCACTGAGCGATTCCCCGGAACTGGTGAACAGCGAACCGTATGCAGGCGGCTGGATCTTTAAAATCAAAGCCAGCGATGAAAGCGAACTGGAATCACTGCTGGATGCGACCGCATACGAAGCATTGTTAGAAGACGAGTAA", + "dna_sequence_length": 390, + "functions": [ + "glycine cleavage complex lipoylprotein" + ], + "id": "CDS_2861", + "location": [ + [ + "NC_000913", + 3049549, + "-", + 390 + ] + ], + "md5": "6da845b42a3dfd9ce8ca3354b58b791f", + "parent_gene": "", + "protein_md5": "b8d23914181ff55fc2280029e8189235", + "protein_translation": "MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009536" + ], + [ + "gene_synonym", + "ECK2900" + ], + [ + "gene_synonym", + "EcoGene:EG11442" + ], + [ + "gene_synonym", + "GI:16130807" + ], + [ + "gene_synonym", + "GeneID:947390" + ], + [ + "gene_synonym", + "JW2873" + ], + [ + "gene_synonym", + "NP_417381.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27248" + ], + [ + "gene_synonym", + "b2905" + ], + [ + "gene_synonym", + "gcvT" + ] + ], + "dna_sequence": "ATGGCACAACAGACTCCTTTGTACGAACAACACACGCTTTGCGGCGCTCGCATGGTGGATTTCCACGGCTGGATGATGCCGCTGCATTACGGTTCGCAAATCGACGAACATCATGCGGTACGTACCGATGCCGGAATGTTTGATGTGTCACATATGACCATCGTCGATCTTCGCGGCAGCCGCACCCGGGAGTTTCTGCGTTATCTGCTGGCGAACGATGTGGCGAAGCTCACCAAAAGCGGCAAAGCCCTTTACTCGGGGATGTTGAATGCCTCTGGCGGTGTGATAGATGACCTCATCGTCTACTACTTTACTGAAGATTTCTTCCGCCTCGTTGTTAACTCCGCCACCCGCGAAAAAGACCTCTCCTGGATTACCCAACACGCTGAACCTTTCGGCATCGAAATTACCGTTCGTGATGACCTTTCCATGATTGCCGTGCAAGGGCCGAATGCGCAGGCAAAAGCTGCCACACTGTTTAATGACGCCCAGCGTCAGGCGGTGGAAGGGATGAAACCGTTCTTTGGCGTGCAGGCGGGCGATCTGTTTATTGCCACCACTGGTTATACCGGTGAAGCGGGCTATGAAATTGCGCTGCCCAATGAAAAAGCGGCCGATTTCTGGCGTGCGCTGGTGGAAGCGGGTGTTAAGCCATGTGGCTTGGGCGCGCGTGACACGCTGCGTCTGGAAGCGGGCATGAATCTTTATGGTCAGGAGATGGACGAAACCATCTCTCCTTTAGCCGCCAACATGGGCTGGACCATCGCCTGGGAACCGGCAGATCGTGACTTTATCGGTCGTGAAGCCCTGGAAGTGCAGCGTGAGCATGGTACAGAAAAACTGGTTGGTCTGGTGATGACCGAAAAAGGCGTGCTGCGTAATGAACTGCCGGTACGCTTTACCGATGCGCAGGGCAACCAGCATGAAGGCATTATCACCAGCGGTACTTTCTCCCCGACGCTGGGTTACAGCATTGCGCTGGCGCGCGTGCCGGAAGGTATTGGCGAAACGGCGATTGTGCAAATTCGCAACCGTGAAATGCCGGTTAAAGTGACAAAACCTGTTTTTGTGCGTAACGGCAAAGCCGTCGCGTGA", + "dna_sequence_length": 1095, + "functions": [ + "aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex" + ], + "id": "CDS_2862", + "location": [ + [ + "NC_000913", + 3050667, + "-", + 1095 + ] + ], + "md5": "c3408ae41bd34053d68b98e4374aeab5", + "parent_gene": "", + "protein_md5": "84044b10cc38bdc6b5a13d1ae107b0b9", + "protein_translation": "MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA", + "protein_translation_length": 364, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009543" + ], + [ + "gene_synonym", + "ECK2901" + ], + [ + "gene_synonym", + "EcoGene:EG11333" + ], + [ + "gene_synonym", + "GI:16130808" + ], + [ + "gene_synonym", + "GeneID:947389" + ], + [ + "gene_synonym", + "JW2874" + ], + [ + "gene_synonym", + "NP_417382.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25535" + ], + [ + "gene_synonym", + "b2906" + ], + [ + "gene_synonym", + "ubiI" + ], + [ + "gene_synonym", + "visC" + ] + ], + "dna_sequence": "ATGCAAAGTGTTGATGTAGCCATTGTTGGCGGCGGCATGGTGGGGCTGGCGGTTGCCTGTGGCTTACAGGGGAGCGGCTTACGCGTTGCCGTACTGGAGCAGCGCGTACAGGAACCTCTGGCGGCGAATGCACCACCACAACTGCGCGTTTCGGCTATCAATGCCGCCAGCGAAAAATTACTCACCCGTCTTGGCGTCTGGCAGGACATTCTCTCTCGTAGGGCCAGCTGTTATCACGGTATGGAAGTGTGGGACAAAGACAGCTTTGGTCACATTTCGTTTGACGATCAAAGCATGGGCTATAGCCATCTTGGGCATATCGTTGAAAATTCAGTGATTCACTACGCGCTGTGGAACAAAGCGCATCAGTCGTCAGATATCACTCTGTTAGCCCCCGCAGAATTACAGCAGGTCGCCTGGGGAGAAAATGAAACCTTCCTGACGCTGAAAGATGGCAGCATGTTAACGGCGCGTCTGGTGATTGGCGCGGACGGCGCTAATTCCTGGTTGCGCAACAAAGCCGATATTCCGCTGACTTTCTGGGATTATCAGCATCACGCGCTGGTAGCGACCATTCGCACGGAAGAACCGCATGATGCGGTGGCGCGGCAGGTTTTCCATGGCGAAGGCATTCTGGCCTTTTTACCGCTTAGCGATCCGCATCTTTGCTCGATTGTCTGGTCACTGTCGCCAGAGGAAGCGCAGCGGATGCAGCAGGCAAGTGAAGACGAATTTAATCGCGCGTTAAATATCGCTTTTGATAATCGCCTGGGCTTATGCAAGGTTGAGAGCGCGCGTCAGGTGTTCCCACTGACGGGGCGTTATGCGCGCCAGTTTGCCTCGCACCGTCTGGCGCTGGTGGGCGACGCCGCACATACCATTCACCCGCTGGCGGGGCAGGGGGTAAATCTCGGCTTTATGGATGCTGCAGAGCTGATTGCCGAACTGAAACGGTTGCATCGTCAGGGGAAAGACATCGGGCAGTACATTTATCTGCGTCGCTATGAGCGTAGCCGCAAGCACAGTGCGGCGTTGATGCTGGCTGGTATGCAGGGATTCCGCGATCTGTTTTCCGGTACCAATCCGGCGAAAAAACTGCTGCGTGATATTGGTTTGAAACTGGCCGACACGCTTCCTGGCGTTAAGCCGCAACTTATCCGCCAGGCAATGGGATTAAACGATTTGCCTGAATGGCTGCGTTAA", + "dna_sequence_length": 1203, + "functions": [ + "2-octaprenylphenol hydroxylase, FAD-dependent" + ], + "id": "CDS_2863", + "location": [ + [ + "NC_000913", + 3052317, + "-", + 1203 + ] + ], + "md5": "b76c2140aee8a2c76a07c397c97a6f1c", + "parent_gene": "", + "protein_md5": "00fef402125bf2619fb9208e93848dac", + "protein_translation": "MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009545" + ], + [ + "gene_synonym", + "ECK2902" + ], + [ + "gene_synonym", + "EcoGene:EG11324" + ], + [ + "gene_synonym", + "GI:16130809" + ], + [ + "gene_synonym", + "GeneID:947388" + ], + [ + "gene_synonym", + "JW2875" + ], + [ + "gene_synonym", + "NP_417383.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25534" + ], + [ + "gene_synonym", + "acd" + ], + [ + "gene_synonym", + "b2907" + ], + [ + "gene_synonym", + "ubiH" + ], + [ + "gene_synonym", + "visB" + ] + ], + "dna_sequence": "ATGAGCGTAATCATCGTCGGTGGCGGCATGGCGGGCGCGACGCTGGCGCTGGCTATTTCCCGGTTAAGTCACGGGGCGCTGCCGGTACATTTGATTGAAGCGACTGCGCCAGAGTCACATGCTCATCCGGGCTTTGATGGACGAGCGATAGCGCTGGCGGCGGGTACCTGTCAGCAACTGGCGCGCATCGGCGTCTGGCAATCTCTGGCGGATTGCGCAACTGCCATCACCACCGTGCATGTCAGCGATCGTGGTCACGCTGGATTTGTCACCCTCGCCGCAGAAGATTACCAACTGGCGGCGCTGGGACAGGTTGTCGAATTGCACAATGTCGGGCAACGGCTGTTTGCATTGCTGCGTAAAGCACCTGGCGTAACGCTGCATTGCCCTGATCGCGTGGCTAACGTTGCCCGTACTCAGAGTCACGTTGAAGTGACGCTGGAGAGTGGCGAGACGCTGACGGGCCGCGTGCTGGTAGCAGCTGATGGCACCCATTCAGCGTTAGCCACCGCGTGCGGCGTTGACTGGCAGCAGGAGCCTTACGAACAACTGGCCGTGATTGCCAACGTTGCTACTTCCGTTGCGCATGAAGGGCGCGCTTTTGAACGCTTTACGCAACATGGCCCGCTGGCGATGTTGCCGATGTCTGACGGACGCTGTTCGCTGGTCTGGTGTCATCCACTGGAACGGCGCGAAGAGGTGTTGTCGTGGAGTGACGAGAAGTTTTGCCGTGAACTCCAGTCGGCCTTTGGCTGGCGACTTGGGAAAATTACCCACGCTGGTAAACGCAGTGCTTATCCGCTGGCGTTAACCCACGCCGCCAGATCTATTACCCATCGTACCGTGCTGGTGGGCAATGCGGCGCAAACTCTGCACCCGATTGCCGGGCAAGGGTTTAACCTCGGTATGCGAGATGTGATGAGTCTTGCGGAAACCCTGACTCAGGCGCAGGAGCGCGGAGAAGACATGGGGGATTACGGCGTATTGTGCCGTTATCAGCAGCGTCGACAGAGCGATCGCGAAGCAACCATTGGCGTCACGGACAGCCTTGTACATCTTTTTGCCAACCGTTGGGCACCGCTGGTTGTCGGGCGCAACATCGGGCTGATGACGATGGAATTATTCACCCCGGCACGCGATGTGCTGGCGCAGCGCACCCTCGGTTGGGTGGCGCGTTGA", + "dna_sequence_length": 1179, + "functions": [ + "2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding" + ], + "id": "CDS_2864", + "location": [ + [ + "NC_000913", + 3053518, + "-", + 1179 + ] + ], + "md5": "2e1fac36cbfaa4bd148a1ba18c612f6f", + "parent_gene": "", + "protein_md5": "ea5d81083025be29c0eabd8699a37484", + "protein_translation": "MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPGFDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAALGQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVAADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDGRCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTHAARSITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAQERGEDMGDYGVLCRYQQRRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009549" + ], + [ + "gene_synonym", + "ECK2903" + ], + [ + "gene_synonym", + "EcoGene:EG10697" + ], + [ + "gene_synonym", + "GI:16130810" + ], + [ + "gene_synonym", + "GeneID:947385" + ], + [ + "gene_synonym", + "JW2876" + ], + [ + "gene_synonym", + "NP_417384.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15034" + ], + [ + "gene_synonym", + "b2908" + ], + [ + "gene_synonym", + "pepP" + ] + ], + "dna_sequence": "ATGAGTGAGATATCCCGGCAAGAGTTTCAGCGTCGCCGTCAGGCCCTGGTGGAGCAAATGCAACCCGGCAGCGCCGCGCTGATTTTTGCTGCACCAGAAGTAACACGTAGCGCCGACAGCGAATACCCCTATCGTCAGAACAGTGACTTCTGGTACTTCACCGGCTTTAACGAACCGGAAGCGGTGCTGGTGCTGATTAAAAGCGATGACACTCATAACCACAGCGTTCTGTTTAACCGCGTTCGCGACCTGACGGCGGAGATCTGGTTTGGCCGTCGCTTAGGCCAGGATGCCGCGCCAGAGAAACTGGGCGTTGACCGCGCACTGGCATTCAGCGAAATCAATCAGCAACTTTATCAACTACTTAACGGCCTGGATGTGGTTTACCATGCCCAGGGCGAATATGCATATGCTGATGTAATCGTGAACAGTGCGCTGGAAAAACTGCGTAAAGGTTCGCGGCAAAATCTCACCGCACCGGCAACGATGATCGACTGGCGTCCTGTTGTTCATGAAATGCGCCTGTTCAAATCGCCAGAAGAGATTGCCGTACTCCGCCGCGCGGGAGAAATCACCGCCATGGCACATACACGGGCGATGGAAAAATGCCGTCCGGGAATGTTCGAGTACCATCTGGAAGGCGAAATTCACCACGAATTTAACCGCCACGGTGCGCGCTATCCGTCCTATAACACCATTGTCGGCAGCGGTGAAAACGGCTGCATTCTGCACTACACCGAAAACGAGTGTGAAATGCGCGACGGCGACCTGGTGTTGATTGACGCGGGTTGTGAATACAAAGGTTACGCTGGCGATATTACCCGCACCTTCCCGGTCAACGGCAAATTCACCCAGGCCCAGCGTGAAATCTACGACATTGTGCTGGAGTCTCTCGAAACCAGCCTGCGCCTGTATCGTCCGGGAACTTCCATTCTGGAAGTCACTGGTGAAGTGGTGCGCATCATGGTTAGCGGCCTGGTAAAACTCGGCATCCTGAAAGGTGATGTTGATGAACTGATCGCTCAGAACGCCCATCGTCCTTTCTTTATGCATGGCCTTAGCCACTGGTTAGGACTGGATGTCCATGACGTGGGTGTTTATGGTCAGGATCGCTCGCGCATTCTGGAACCGGGCATGGTACTGACCGTAGAGCCAGGGCTGTATATTGCGCCGGATGCAGAAGTGCCAGAACAATATCGCGGTATCGGCATTCGTATTGAAGACGACATTGTGATTACCGAAACCGGTAACGAAAACCTCACCGCCAGCGTGGTGAAAAAGCCGGAAGAAATCGAAGCGTTGATGGTTGCTGCGAGAAAGCAATGA", + "dna_sequence_length": 1326, + "functions": [ + "proline aminopeptidase P II" + ], + "id": "CDS_2865", + "location": [ + [ + "NC_000913", + 3054840, + "-", + 1326 + ] + ], + "md5": "ffbbb3ab8e954ea42b6eee61f185caae", + "parent_gene": "", + "protein_md5": "275512afb21914aefcc9a9a502193acd", + "protein_translation": "MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ", + "protein_translation_length": 441, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009551" + ], + [ + "gene_synonym", + "ECK2904" + ], + [ + "gene_synonym", + "EcoGene:EG11323" + ], + [ + "gene_synonym", + "GI:90111511" + ], + [ + "gene_synonym", + "GeneID:947400" + ], + [ + "gene_synonym", + "JW5473" + ], + [ + "gene_synonym", + "NP_417385.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8C4" + ], + [ + "gene_synonym", + "b2909" + ], + [ + "gene_synonym", + "ygfB" + ] + ], + "dna_sequence": "ATGTCTATACAGAACGAAATGCCTGGTTACAACGAAATGAACCAGTATCTGAACCAACAAGGGACGGGTCTGACCCCAGCTGAGATGCATGGTTTAATCAGCGGGATGATATGTGGCGGTAACGATGACAGCTCATGGCTACCGCTACTTCACGACCTGACGAACGAAGGCATGGCTTTCGGTCATGAGCTGGCACAGGCACTGCGTAAAATGCACTCTGCCACCAGCGATGCCCTGCAGGATGACGGCTTCCTTTTTCAGCTTTATCTGCCTGATGGCGATGATGTCAGCGTTTTCGATCGGGCTGATGCATTGGCAGGTTGGGTCAATCACTTCCTGCTTGGTCTTGGCGTTACGCAACCGAAGCTGGATAAAGTGACCGGCGAAACCGGTGAAGCTATCGACGATCTGCGTAACATTGCGCAACTGGGTTACGACGAAGACGAAGATCAGGAAGAGCTTGAAATGTCGCTTGAAGAGATCATCGAATACGTTCGTGTTGCCGCGCTGTTATGCCACGACACCTTTACTCATCCGCAACCGACCGCGCCAGAAGTACAAAAACCGACTCTACACTAA", + "dna_sequence_length": 579, + "functions": [ + "UPF0149 family protein" + ], + "id": "CDS_2866", + "location": [ + [ + "NC_000913", + 3055444, + "-", + 579 + ] + ], + "md5": "ef51fe21fdb15aa9328bab844c7577f5", + "parent_gene": "", + "protein_md5": "11e1d8245e2b527575eb233365f89e9b", + "protein_translation": "MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009554" + ], + [ + "gene_synonym", + "ECK2905" + ], + [ + "gene_synonym", + "EcoGene:EG12878" + ], + [ + "gene_synonym", + "GI:16130812" + ], + [ + "gene_synonym", + "GeneID:947404" + ], + [ + "gene_synonym", + "JW2878" + ], + [ + "gene_synonym", + "NP_417386.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADS2" + ], + [ + "gene_synonym", + "b2910" + ], + [ + "gene_synonym", + "ygfE" + ], + [ + "gene_synonym", + "zapA" + ] + ], + "dna_sequence": "ATGTCTGCACAACCCGTCGATATCCAAATTTTTGGCCGTTCACTGCGTGTGAACTGCCCGCCTGACCAAAGGGATGCGTTGAATCAGGCAGCGGACGATCTGAACCAACGGTTGCAAGATCTGAAAGAACGCACTAGAGTCACAAATACTGAACAGTTGGTCTTCATTGCCGCATTGAATATCAGCTATGAGTTAGCGCAAGAAAAAGCAAAGACTCGTGACTACGCGGCAAGTATGGAACAGCGTATTCGGATGCTGCAGCAGACCATAGAACAAGCGTTACTTGAACAAGGTCGCATCACCGAAAAAACTAACCAAAACTTTGAATGA", + "dna_sequence_length": 330, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_2867", + "location": [ + [ + "NC_000913", + 3055612, + "+", + 330 + ] + ], + "md5": "3100a24e542ae86fcf3f46020e8f24d9", + "parent_gene": "", + "protein_md5": "c676d7a5e37881537273eca495577ba4", + "protein_translation": "MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009559" + ], + [ + "gene_synonym", + "ECK2907" + ], + [ + "gene_synonym", + "EcoGene:EG11158" + ], + [ + "gene_synonym", + "GI:49176282" + ], + [ + "gene_synonym", + "GeneID:945167" + ], + [ + "gene_synonym", + "JW2879" + ], + [ + "gene_synonym", + "NP_417387.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC28" + ], + [ + "gene_synonym", + "b2912" + ], + [ + "gene_synonym", + "fau" + ], + [ + "gene_synonym", + "ygfA" + ] + ], + "dna_sequence": "ATGATTCGGCAACGTCGTCGTGCGTTAACGCCGGAACAACAGCAGGAAATGGGTCAACAAGCCGCTACCCGGATGATGACTTATCCCCCGGTGGTGATGGCACATACGGTCGCTGTATTCCTCTCTTTTGATGGCGAACTCGACACCCAGCCACTCATAGAACAACTCTGGCGCGCCGGTAAGCGCGTATATCTTCCAGTTTTGCATCCCTTTAGTGCCGGTAATTTGCTGTTCCTGAATTACCATCCGCAAAGCGAACTGGTGATGAACAGGTTGAAGATCCATGAGCCAAAATTGGATGTGCGTGACGTGCTACCCCTTTCCCGATTAGACGTGCTGATCACACCGCTGGTCGCCTTTGATGAGTACGGTCAGCGCCTGGGAATGGGCGGTGGTTTTTATGATCGGACCTTACAAAACTGGCAGCACTATAAAACGCAACCGGTGGGTTATGCGCATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAA", + "dna_sequence_length": 549, + "functions": [ + "5-formyltetrahydrofolate cyclo-ligase family protein" + ], + "id": "CDS_2868", + "location": [ + [ + "NC_000913", + 3056241, + "+", + 549 + ] + ], + "md5": "f65d30fd4615072db225d5b32257638e", + "parent_gene": "", + "protein_md5": "1307f52b0de9a0f37ffbb7b5e25a8476", + "protein_translation": "MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4480" + ], + [ + "gene_synonym", + "EcoGene:EG14470" + ], + [ + "gene_synonym", + "GI:226524746" + ], + [ + "gene_synonym", + "GeneID:7751627" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P615" + ], + [ + "gene_synonym", + "YP_002791255.1" + ], + [ + "gene_synonym", + "b4665" + ], + [ + "gene_synonym", + "ibsC" + ] + ], + "dna_sequence": "ATGATGCGACTTGTCATCATACTGATTGTACTGTTACTCATAAGTTTCAGCGCTTATTAA", + "dna_sequence_length": 60, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_2869", + "location": [ + [ + "NC_000913", + 3056949, + "-", + 60 + ] + ], + "md5": "734b88092c296babfcd9373b530ec931", + "parent_gene": "", + "protein_md5": "38a95d84901e00f2c24db98e397096fa", + "protein_translation": "MMRLVIILIVLLLISFSAY", + "protein_translation_length": 19, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009561" + ], + [ + "gene_synonym", + "ECK2909" + ], + [ + "gene_synonym", + "EcoGene:EG10944" + ], + [ + "gene_synonym", + "GI:16130814" + ], + [ + "gene_synonym", + "GeneID:945258" + ], + [ + "gene_synonym", + "JW2880" + ], + [ + "gene_synonym", + "NP_417388.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T0" + ], + [ + "gene_synonym", + "b2913" + ], + [ + "gene_synonym", + "serA" + ] + ], + "dna_sequence": "ATGGCAAAGGTATCGCTGGAGAAAGACAAGATTAAGTTTCTGCTGGTAGAAGGCGTGCACCAAAAGGCGCTGGAAAGCCTTCGTGCAGCTGGTTACACCAACATCGAATTTCACAAAGGCGCGCTGGATGATGAACAATTAAAAGAATCCATCCGCGATGCCCACTTCATCGGCCTGCGATCCCGTACCCATCTGACTGAAGACGTGATCAACGCCGCAGAAAAACTGGTCGCTATTGGCTGTTTCTGTATCGGAACAAACCAGGTTGATCTGGATGCGGCGGCAAAGCGCGGGATCCCGGTATTTAACGCACCGTTCTCAAATACGCGCTCTGTTGCGGAGCTGGTGATTGGCGAACTGCTGCTGCTATTGCGCGGCGTGCCGGAAGCCAATGCTAAAGCGCACCGTGGCGTGTGGAACAAACTGGCGGCGGGTTCTTTTGAAGCGCGCGGCAAAAAGCTGGGTATCATCGGCTACGGTCATATTGGTACGCAATTGGGCATTCTGGCTGAATCGCTGGGAATGTATGTTTACTTTTATGATATTGAAAATAAACTGCCGCTGGGCAACGCCACTCAGGTACAGCATCTTTCTGACCTGCTGAATATGAGCGATGTGGTGAGTCTGCATGTACCAGAGAATCCGTCCACCAAAAATATGATGGGCGCGAAAGAAATTTCACTAATGAAGCCCGGCTCGCTGCTGATTAATGCTTCGCGCGGTACTGTGGTGGATATTCCGGCGCTGTGTGATGCGCTGGCGAGCAAACATCTGGCGGGGGCGGCAATCGACGTATTCCCGACGGAACCGGCGACCAATAGCGATCCATTTACCTCTCCGCTGTGTGAATTCGACAACGTCCTTCTGACGCCACACATTGGCGGTTCGACTCAGGAAGCGCAGGAGAATATCGGCCTGGAAGTTGCGGGTAAATTGATCAAGTATTCTGACAATGGCTCAACGCTCTCTGCGGTGAACTTCCCGGAAGTCTCGCTGCCACTGCACGGTGGGCGTCGTCTGATGCACATCCACGAAAACCGTCCGGGCGTGCTAACTGCGCTGAACAAAATCTTCGCCGAGCAGGGCGTCAACATCGCCGCGCAATATCTGCAAACTTCCGCCCAGATGGGTTATGTGGTTATTGATATTGAAGCCGACGAAGACGTTGCCGAAAAAGCGCTGCAGGCAATGAAAGCTATTCCGGGTACCATTCGCGCCCGTCTGCTGTACTAA", + "dna_sequence_length": 1233, + "functions": [ + "D-3-phosphoglycerate dehydrogenase" + ], + "id": "CDS_2870", + "location": [ + [ + "NC_000913", + 3058410, + "-", + 1233 + ] + ], + "md5": "df0df2f3efe7de021db5177957e4e6bb", + "parent_gene": "", + "protein_md5": "3717bd7ab503d25bbe3ebf6dbc73ec6e", + "protein_translation": "MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLLY", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009567" + ], + [ + "gene_synonym", + "ECK2910" + ], + [ + "gene_synonym", + "EcoGene:EG11443" + ], + [ + "gene_synonym", + "GI:16130815" + ], + [ + "gene_synonym", + "GeneID:947407" + ], + [ + "gene_synonym", + "JW5475" + ], + [ + "gene_synonym", + "NP_417389.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Z0" + ], + [ + "gene_synonym", + "b2914" + ], + [ + "gene_synonym", + "rpiA" + ], + [ + "gene_synonym", + "ygfC" + ] + ], + "dna_sequence": "ATGACGCAGGATGAATTGAAAAAAGCAGTAGGATGGGCGGCACTTCAGTATGTTCAGCCCGGCACCATTGTTGGTGTAGGTACAGGTTCCACCGCCGCACACTTTATTGACGCGCTCGGTACAATGAAAGGCCAGATTGAAGGGGCCGTTTCCAGTTCAGATGCTTCCACTGAAAAACTGAAAAGCCTCGGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACGGCCACATGCAAATGATCAAAGGCGGCGGCGCGGCGCTGACCCGTGAAAAAATCATTGCTTCGGTTGCAGAAAAATTTATCTGTATTGCAGACGCTTCCAAGCAGGTTGATATTCTGGGTAAATTCCCGCTGCCAGTAGAAGTTATCCCGATGGCACGTAGTGCAGTGGCGCGTCAGCTGGTGAAACTGGGCGGTCGTCCGGAATACCGTCAGGGCGTGGTGACCGATAATGGCAACGTGATCCTCGACGTCCACGGCATGGAAATCCTTGACCCGATAGCGATGGAAAACGCCATAAATGCGATTCCTGGCGTGGTGACTGTTGGCTTGTTTGCTAACCGTGGCGCGGACGTTGCGCTGATTGGCACACCTGACGGTGTCAAAACCATTGTGAAATGA", + "dna_sequence_length": 660, + "functions": [ + "ribose 5-phosphate isomerase, constitutive" + ], + "id": "CDS_2871", + "location": [ + [ + "NC_000913", + 3059325, + "-", + 660 + ] + ], + "md5": "1bd61d2d4885b323e2eefeff904f098f", + "parent_gene": "", + "protein_md5": "98822156c91c8e151fc394de8e11cfce", + "protein_translation": "MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009570" + ], + [ + "gene_synonym", + "ECK2911" + ], + [ + "gene_synonym", + "EcoGene:EG13163" + ], + [ + "gene_synonym", + "GeneID:946707" + ], + [ + "gene_synonym", + "JW2882" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64562" + ], + [ + "gene_synonym", + "b2915" + ], + [ + "gene_synonym", + "yqfE" + ] + ], + "dna_sequence": "TGTGTCAGGTTGCATATACCGAAGCCGTCGGCGGGTAACATTTGTATCCGTGGTTAAAAGCGCAGCTTAAAAGATCAGGGATTTGCGCTAATGCATTTCGCTCAGCGAGTTCGCGCCCTGGTTGTGTTGAATGGCGTGGCGTTATTGCCTCAATTTGCCTGTAAACAGGGGCTTGCGAACGGTGAACTGGTGCGCCTGTTTGCACCGTGGAGCGGCATACCCAGACCGTTGTATGCTTTATTTGCGGGGCGAAAGGGGATGCCTGCCATTGCGCGATATTTTATGGATGAGTTAACCACGCGGCTTGCCAACGGGGTCTGA", + "dna_sequence_length": 321, + "id": "CDS_2872", + "location": [ + [ + "NC_000913", + 3059701, + "-", + 321 + ] + ], + "md5": "f5ae81b83370fe4b0dec2aed42b99007", + "parent_gene": "", + "protein_md5": "064f5e6c3ecdc0188b2853cc2a9dbf82", + "protein_translation": "CVRLHIPKPSAGNICIRG", + "protein_translation_length": 18, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009574" + ], + [ + "gene_synonym", + "ECK2912" + ], + [ + "gene_synonym", + "EcoGene:EG10490" + ], + [ + "gene_synonym", + "GI:16130817" + ], + [ + "gene_synonym", + "GeneID:944867" + ], + [ + "gene_synonym", + "JW2883" + ], + [ + "gene_synonym", + "NP_417391.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8S1" + ], + [ + "gene_synonym", + "argP" + ], + [ + "gene_synonym", + "b2916" + ], + [ + "gene_synonym", + "can" + ], + [ + "gene_synonym", + "canR" + ], + [ + "gene_synonym", + "iciA" + ] + ], + "dna_sequence": "ATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATACGTGAACGAGGATTTGAGCGCGCGGCACAAAAGCTGTGCATTACACAATCAGCCGTCTCACAGCGCATTAAGCAACTGGAAAATATGTTCGGGCAGCCGCTGTTGGTGCGTACCGTACCGCCGCGCCCGACGGAACAAGGGCAAAAACTGCTGGCACTGCTGCGCCAGGTGGAGTTGCTGGAAGAAGAGTGGCTGGGCGATGAACAAACCGGTTCGACTCCGCTGCTGCTTTCACTGGCGGTCAACGCCGACAGTCTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTAACGCGTTCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCGAGAAAGAGCTGGCCAGCGGTGAACTGATTGACTTAACGCCTGGGCTATTTCAACGACGGATGCTCTACTGGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAA", + "dna_sequence_length": 894, + "functions": [ + "transcriptional regulator for arginine transport and DNA replication genes", + "replication initiation inhibitor" + ], + "id": "CDS_2873", + "location": [ + [ + "NC_000913", + 3059753, + "+", + 894 + ] + ], + "md5": "3b304efe2fd45f88f9b271c236f6ef11", + "parent_gene": "", + "protein_md5": "83bddd0a987410c35d7911df4a93d36f", + "protein_translation": "MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009577" + ], + [ + "gene_synonym", + "ECK2913" + ], + [ + "gene_synonym", + "EcoGene:EG11444" + ], + [ + "gene_synonym", + "GI:16130818" + ], + [ + "gene_synonym", + "GeneID:945576" + ], + [ + "gene_synonym", + "JW2884" + ], + [ + "gene_synonym", + "NP_417392.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27253" + ], + [ + "gene_synonym", + "b2917" + ], + [ + "gene_synonym", + "mcm" + ], + [ + "gene_synonym", + "sbm" + ], + [ + "gene_synonym", + "scpA" + ], + [ + "gene_synonym", + "yliK" + ] + ], + "dna_sequence": "ATGTCTAACGTGCAGGAGTGGCAACAGCTTGCCAACAAGGAATTGAGCCGTCGGGAGAAAACTGTCGACTCGCTGGTTCATCAAACCGCGGAAGGGATCGCCATCAAGCCGCTGTATACCGAAGCCGATCTCGATAATCTGGAGGTGACAGGTACCCTTCCTGGTTTGCCGCCCTACGTTCGTGGCCCGCGTGCCACTATGTATACCGCCCAACCGTGGACCATCCGTCAGTATGCTGGTTTTTCAACAGCAAAAGAGTCCAACGCTTTTTATCGCCGTAACCTGGCCGCCGGGCAAAAAGGTCTTTCCGTTGCGTTTGACCTTGCCACCCACCGTGGCTACGACTCCGATAACCCGCGCGTGGCGGGCGACGTCGGCAAAGCGGGCGTCGCTATCGACACCGTGGAAGATATGAAAGTCCTGTTCGACCAGATCCCGCTGGATAAAATGTCGGTTTCGATGACCATGAATGGCGCAGTGCTACCAGTACTGGCGTTTTATATCGTCGCCGCAGAAGAGCAAGGTGTTACACCTGATAAACTGACCGGCACCATTCAAAACGATATTCTCAAAGAGTACCTCTGCCGCAACACCTATATTTACCCACCAAAACCGTCAATGCGCATTATCGCCGACATCATCGCCTGGTGTTCCGGCAACATGCCGCGATTTAATACCATCAGTATCAGCGGTTACCACATGGGTGAAGCGGGTGCCAACTGCGTGCAGCAGGTAGCATTTACGCTCGCTGATGGGATTGAGTACATCAAAGCAGCAATCTCTGCCGGACTGAAAATTGATGACTTCGCTCCTCGCCTGTCGTTCTTCTTCGGCATCGGCATGGATCTGTTTATGAACGTCGCCATGTTGCGTGCGGCACGTTATTTATGGAGCGAAGCGGTCAGTGGATTTGGCGCACAGGACCCGAAATCACTGGCGCTGCGTACCCACTGCCAGACCTCAGGCTGGAGCCTGACTGAACAGGATCCGTATAACAACGTTATCCGCACCACCATTGAAGCGCTGGCTGCGACGCTGGGCGGTACTCAGTCACTGCATACCAACGCCTTTGACGAAGCGCTTGGTTTGCCTACCGATTTCTCAGCACGCATTGCCCGCAACACCCAGATCATCATCCAGGAAGAATCAGAACTCTGCCGCACCGTCGATCCACTGGCCGGATCCTATTACATTGAGTCGCTGACCGATCAAATCGTCAAACAAGCCAGAGCTATTATCCAACAGATCGACGAAGCCGGTGGCATGGCGAAAGCGATCGAAGCAGGTCTGCCAAAACGAATGATCGAAGAGGCCTCAGCGCGCGAACAGTCGCTGATCGACCAGGGCAAGCGTGTCATCGTTGGTGTCAACAAGTACAAACTGGATCACGAAGACGAAACCGATGTACTTGAGATCGACAACGTGATGGTGCGTAACGAGCAAATTGCTTCGCTGGAACGCATTCGCGCCACCCGTGATGATGCCGCCGTAACCGCCGCGTTGAACGCCCTGACTCACGCCGCACAGCATAACGAAAACCTGCTGGCTGCCGCTGTTAATGCCGCTCGCGTTCGCGCCACCCTGGGTGAAATTTCCGATGCGCTGGAAGTCGCTTTCGACCGTTATCTGGTGCCAAGCCAGTGTGTTACCGGCGTGATTGCGCAAAGCTATCATCAGTCTGAGAAATCGGCCTCCGAGTTCGATGCCATTGTTGCGCAAACGGAGCAGTTCCTTGCCGACAATGGTCGTCGCCCGCGCATTCTGATCGCTAAGATGGGCCAGGATGGACACGATCGCGGCGCGAAAGTGATCGCCAGCGCCTATTCCGATCTCGGTTTCGACGTAGATTTAAGCCCGATGTTCTCTACACCTGAAGAGATCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCGGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAA", + "dna_sequence_length": 2145, + "functions": [ + "methylmalonyl-CoA mutase" + ], + "id": "CDS_2874", + "location": [ + [ + "NC_000913", + 3060850, + "+", + 2145 + ] + ], + "md5": "606e62567bba5a7bd5411fb24ae1f1d1", + "parent_gene": "", + "protein_md5": "f3126b331c87c32b2508ea259d60c90b", + "protein_translation": "MSNVQEWQQLANKELSRREKTVDSLVHQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIASLERIRATRDDAAVTAALNALTHAAQHNENLLAAAVNAARVRATLGEISDALEVAFDRYLVPSQCVTGVIAQSYHQSEKSASEFDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPGTPMLDSVRDVLNLISQHHD", + "protein_translation_length": 714, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009579" + ], + [ + "gene_synonym", + "ECK2914" + ], + [ + "gene_synonym", + "EcoGene:EG11445" + ], + [ + "gene_synonym", + "GI:16130819" + ], + [ + "gene_synonym", + "GeneID:947412" + ], + [ + "gene_synonym", + "JW2885" + ], + [ + "gene_synonym", + "NP_417393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27254" + ], + [ + "gene_synonym", + "argK" + ], + [ + "gene_synonym", + "b2918" + ], + [ + "gene_synonym", + "meaB" + ], + [ + "gene_synonym", + "scpK?" + ], + [ + "gene_synonym", + "ygfD" + ] + ], + "dna_sequence": "ATGATTAATGAAGCCACGCTGGCAGAAAGTATTCGCCGCTTACGTCAGGGTGAGCGTGCCACACTCGCCCAGGCCATGACGCTGGTGGAAAGCCGTCACCCGCGTCATCAGGCACTAAGTACGCAGCTGCTTGATGCCATTATGCCGTACTGCGGTAACACCCTGCGACTGGGCGTTACCGGCACCCCCGGCGCGGGGAAAAGTACCTTTCTTGAGGCCTTTGGCATGTTGTTGATTCGAGAGGGATTAAAGGTCGCGGTTATTGCGGTCGATCCCAGCAGCCCGGTCACTGGCGGTAGCATTCTCGGGGATAAAACCCGCATGAATGACCTGGCGCGTGCCGAAGCGGCGTTTATTCGCCCGGTACCATCCTCCGGTCATCTGGGCGGTGCCAGTCAGCGAGCGCGGGAATTAATGCTGTTATGCGAAGCAGCGGGTTATGACGTAGTGATTGTCGAAACGGTTGGCGTCGGGCAGTCGGAAACAGAAGTCGCCCGCATGGTGGACTGTTTTATCTCGTTGCAAATTGCCGGTGGCGGCGATGATCTGCAGGGCATTAAAAAAGGGCTGATGGAAGTGGCTGATCTGATCGTTATCAACAAAGACGATGGCGATAACCATACCAATGTCGCCATTGCCCGGCATATGTACGAGAGTGCCCTGCATATTCTGCGACGTAAATACGACGAATGGCAGCCACGGGTTCTGACTTGTAGCGCACTGGAAAAACGTGGAATCGATGAGATCTGGCACGCCATCATCGACTTCAAAACCGCGCTAACTGCCAGTGGTCGTTTACAACAAGTGCGGCAACAACAATCGGTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATCACCTGTTCGCGAATGAAGATTTCGATCGCTATTACCGCCAGACGCTTTTAGCGGTCAAAAACAATACGCTCTCACCGCGCACCGGCCTGCGGCAGCTCAGTGAATTTATCCAGACGCAATATTTTGATTAA", + "dna_sequence_length": 996, + "functions": [ + "membrane ATPase/protein kinase" + ], + "id": "CDS_2875", + "location": [ + [ + "NC_000913", + 3062987, + "+", + 996 + ] + ], + "md5": "96a0b17f9fe4bdc8dd4708cd1981e9ca", + "parent_gene": "", + "protein_md5": "73ab7404676a644bb2cc33b95892cb53", + "protein_translation": "MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009581" + ], + [ + "gene_synonym", + "ECK2915" + ], + [ + "gene_synonym", + "EcoGene:EG12972" + ], + [ + "gene_synonym", + "GI:90111512" + ], + [ + "gene_synonym", + "GeneID:947408" + ], + [ + "gene_synonym", + "JW2886" + ], + [ + "gene_synonym", + "NP_417394.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52045" + ], + [ + "gene_synonym", + "b2919" + ], + [ + "gene_synonym", + "mmcD" + ], + [ + "gene_synonym", + "scpB" + ], + [ + "gene_synonym", + "ygfG" + ] + ], + "dna_sequence": "ATGTCTTATCAGTATGTTAACGTTGTCACTATCAACAAAGTGGCGGTCATTGAGTTTAACTATGGCCGAAAACTTAATGCCTTAAGTAAAGTCTTTATTGATGATCTTATGCAGGCGTTAAGCGATCTCAACCGGCCGGAAATTCGCTGTATCATTTTGCGCGCACCGAGTGGATCCAAAGTCTTCTCCGCAGGTCACGATATTCACGAACTGCCGTCTGGCGGTCGCGATCCGCTCTCCTATGATGATCCATTGCGTCAAATCACCCGCATGATCCAAAAATTCCCGAAACCGATCATTTCGATGGTGGAAGGTAGTGTTTGGGGTGGCGCATTTGAAATGATCATGAGTTCCGATCTGATCATCGCCGCCAGTACCTCAACCTTCTCAATGACGCCTGTAAACCTCGGCGTCCCGTATAACCTGGTCGGCATTCACAACCTGACCCGCGACGCGGGCTTCCACATTGTCAAAGAGCTGATTTTTACCGCTTCGCCAATCACCGCCCAGCGCGCGCTGGCTGTCGGCATCCTCAACCATGTTGTGGAAGTGGAAGAACTGGAAGATTTCACCTTACAAATGGCGCACCACATCTCTGAGAAAGCGCCGTTAGCCATTGCCGTTATCAAAGAAGAGCTGCGTGTACTGGGCGAAGCACACACCATGAACTCCGATGAATTTGAACGTATTCAGGGGATGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTTGGTCATTAA", + "dna_sequence_length": 786, + "functions": [ + "methylmalonyl-CoA decarboxylase, biotin-independent" + ], + "id": "CDS_2876", + "location": [ + [ + "NC_000913", + 3063993, + "+", + 786 + ] + ], + "md5": "1a5e2cdf5e3254b25da96ffd04a9af5e", + "parent_gene": "", + "protein_md5": "0e95d9058728eda4dbe930caf65005d8", + "protein_translation": "MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009583" + ], + [ + "gene_synonym", + "ECK2916" + ], + [ + "gene_synonym", + "EcoGene:EG12973" + ], + [ + "gene_synonym", + "GI:16130821" + ], + [ + "gene_synonym", + "GeneID:947402" + ], + [ + "gene_synonym", + "JW2887" + ], + [ + "gene_synonym", + "NP_417395.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52043" + ], + [ + "gene_synonym", + "b2920" + ], + [ + "gene_synonym", + "scpC" + ], + [ + "gene_synonym", + "ygfH" + ] + ], + "dna_sequence": "ATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGCATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCCATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGTGAGTTTCGTTGACCTGCATTTGAGCGAAGTGGCGCAAATGGTCAATTACGGTTTCTTCGGCGACATTGATGTTGCCGTCATTGAAGCATCGGCACTGGCACCGGATGGTCGAGTCTGGTTAACCAGCGGGATCGGTAATGCGCCGACCTGGCTGCTGCGGGCGAAGAAAGTGATCATTGAACTCAATCACTATCACGATCCGCGCGTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAATATCAATAATGCGGTAATGGCGCGTCTGGGGGAAAACCCGGTAATTCCTCCGTTTATGATGTATTCGGAAGTGCTACAGGAATCGGTGGTGCATTTACTGGAAACCGGCAAAATCAGCGGGGCCAGCGCCTCCAGCCTGACAATCTCGGCCGATTCCCTGCGCAAGATTTACGACAATATGGATTACTTTGCCAGCCGCATTGTGTTGCGTCCGCAGGAGATTTCCAATAACCCGGAAATCATCCGTCGTCTGGGCGTCATCGCTCTGAACGTCGGCCTGGAGTTTGATATTTACGGGCATGCCAACTCAACACACGTAGCCGGGGTCGATCTGATGAACGGCATCGGCGGCAGCGGTGATTTTGAACGCAACGCGTATCTGTCGATCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATAATTGTGCACATCCTATGTATCGGGATTATCTGCATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAA", + "dna_sequence_length": 1479, + "functions": [ + "propionyl-CoA:succinate CoA transferase" + ], + "id": "CDS_2877", + "location": [ + [ + "NC_000913", + 3064802, + "+", + 1479 + ] + ], + "md5": "d68d980a58fab9264c5eb6ef1d713e6b", + "parent_gene": "", + "protein_md5": "cc7523a7f047592be94e1210abeed74e", + "protein_translation": "METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG", + "protein_translation_length": 492, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009585" + ], + [ + "gene_synonym", + "ECK2917" + ], + [ + "gene_synonym", + "EcoGene:EG12974" + ], + [ + "gene_synonym", + "GI:90111513" + ], + [ + "gene_synonym", + "GeneID:947401" + ], + [ + "gene_synonym", + "JW5476" + ], + [ + "gene_synonym", + "NP_417396.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52044" + ], + [ + "gene_synonym", + "b2921" + ], + [ + "gene_synonym", + "ygfI" + ] + ], + "dna_sequence": "ATGGACATTTTTATTTCGAAAAAGATGCGCAATTTCATTTTATTAGCGCAAACCAATAATATTGCCCGGGCGGCAGAAAAAATCCATATGACGGCTTCGCCATTTGGTAAAAGCATTGCCGCGCTGGAAGAACAAATTGGCTATACGCTATTTACCCGCAAAGATAATAATATCAGCCTCAATAAAGCCGGACAGGAACTGTATCAAAAACTGTTCCCGGTTTATCAACGGCTTTCTGCGATTGATAATGAAATCCATAACTCAGGGCGTCGTTCACGAGAAATTGTGATTGGCATAGATAATACTTATCCGACAATTATTTTCGATCAGTTGATTAGTCTCGGAGATAAGTATGAAGGCGTGACCGCCCAGCCAGTTGAGTTCAGCGAAAATGGCGTTATCGATAATCTTTTTGACCGCCAGTTAGATTTTATTATCTCCCCACAGCATGTATCTGCACGAGTTCAGGAACTGGAAAACCTGACTATCAGTGAACTACCACCGCTGCGATTAGGCTTTCTCGTTTCTCGCCGTTATGAAGAGCGACAAGAGCAAGAGCTGCTTCAGGAGCTGCCCTGGCTACAAATGCGCTTTCAGAACCGGGCCAACTTCGAAGCAATGATTGATGCGAATATGCGACCTTGTGGGATCAATCCAACCATTATTTATCGTCCCTACAGTTTTATGGCCAAAATCAGCGCCGTGGAGCGCGGACATTTTCTGACGGTGATCCCGCATTTTGCCTGGCGACTGGTGAATCCGGCAACGCTGAAATATTTTGATGCACCGCACAGGCCGATGTATATGCAGGAATATCTTTATTCAATCAGAAATCATCGTTATACCGCCACGATGCTTCAGCATATTGCTGAAGATCGTGACGGGACGAGTCATTAA", + "dna_sequence_length": 897, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_2878", + "location": [ + [ + "NC_000913", + 3067173, + "-", + 897 + ] + ], + "md5": "33613cb70284e4f5cc424e6aac10de25", + "parent_gene": "", + "protein_md5": "bb1cfad3d3e7451672c6ce09a6c4bbde", + "protein_translation": "MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009588" + ], + [ + "gene_synonym", + "ECK2918" + ], + [ + "gene_synonym", + "EcoGene:EG11244" + ], + [ + "gene_synonym", + "GI:16130823" + ], + [ + "gene_synonym", + "GeneID:947398" + ], + [ + "gene_synonym", + "JW2889" + ], + [ + "gene_synonym", + "NP_417397.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADS6" + ], + [ + "gene_synonym", + "b2922" + ], + [ + "gene_synonym", + "yggE" + ] + ], + "dna_sequence": "GTGAAGTTCAAAGTTATCGCCCTGGCGGCATTAATGGGTATTAGCGGGATGGCAGCGCAGGCTAACGAATTGCCGGATGGACCGCATATTGTCACCTCCGGTACGGCAAGCGTGGATGCGGTGCCAGACATTGCCACTCTTGCGATTGAAGTTAACGTGGCCGCGAAGGATGCCGCTACTGCCAAGAAACAGGCAGATGAGCGCGTCGCACAATACATTTCCTTCCTTGAACTCAATCAGATCGCGAAAAAAGATATCAGCTCAGCGAACTTACGCACCCAGCCAGATTATGATTATCAGGATGGTAAAAGTATCCTTAAAGGCTACCGCGCTGTGAGAACGGTGGAAGTCACGCTCCGTCAGTTAGACAAACTGAATTCCTTGCTGGATGGCGCGCTGAAGGCGGGTCTTAACGAAATTCGTTCTGTGTCGCTGGGCGTGGCGCAGCCGGATGCCTATAAAGACAAAGCGCGTAAGGCAGCGATTGATAACGCGATTCATCAGGCGCAGGAACTGGCGAACGGCTTTCATCGTAAACTGGGGCCGGTATATAGCGTGCGCTACCATGTTTCCAACTATCAGCCCAGCCCAATGGTGCGGATGATGAAAGCCGATGCCGCGCCGGTGTCCGCCCAGGAAACTTACGAGCAGGCCGCTATTCAGTTTGATGATCAGGTCGATGTGGTCTTCCAGTTAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAA", + "dna_sequence_length": 741, + "functions": [ + "oxidative stress defense protein" + ], + "id": "CDS_2879", + "location": [ + [ + "NC_000913", + 3068080, + "-", + 741 + ] + ], + "md5": "ecb9fd407a8cf76448bb238b251d6693", + "parent_gene": "", + "protein_md5": "5add01d1931967e905e1a7da984ac384", + "protein_translation": "MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPAKTPAAQ", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009591" + ], + [ + "gene_synonym", + "ECK2919" + ], + [ + "gene_synonym", + "EcoGene:EG11159" + ], + [ + "gene_synonym", + "GI:16130824" + ], + [ + "gene_synonym", + "GeneID:947418" + ], + [ + "gene_synonym", + "JW2890" + ], + [ + "gene_synonym", + "NP_417398.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11667" + ], + [ + "gene_synonym", + "argO" + ], + [ + "gene_synonym", + "b2923" + ], + [ + "gene_synonym", + "yggA" + ] + ], + "dna_sequence": "GTGTTTTCTTATTACTTTCAAGGTCTTGCACTTGGGGCGGCTATGATCCTACCGCTCGGTCCACAAAATGCTTTTGTGATGAATCAGGGCATACGTCGTCAGTACCACATTATGATTGCCTTACTTTGTGCTATCAGCGATTTGGTCCTGATTTGCGCCGGGATTTTTGGTGGCAGCGCGTTATTGATGCAGTCGCCGTGGTTGCTGGCGCTGGTCACCTGGGGCGGCGTAGCCTTCTTGCTGTGGTATGGTTTTGGCGCTTTTAAAACAGCAATGAGCAGTAATATTGAGTTAGCCAGCGCCGAAGTCATGAAGCAAGGCAGATGGAAAATTATCGCCACCATGTTGGCAGTGACCTGGCTGAATCCGCATGTTTACCTGGATACTTTTGTTGTACTGGGCAGCCTTGGCGGGCAACTTGATGTGGAACCAAAACGCTGGTTTGCACTCGGGACAATTAGCGCCTCTTTCCTGTGGTTCTTTGGTCTGGCTCTTCTCGCAGCCTGGCTGGCACCGCGTCTGCGCACGGCAAAAGCACAGCGCATTATCAATCTGGTTGTGGGATGTGTTATGTGGTTTATTGCCTTGCAGCTGGCGAGAGACGGTATTGCTCATGCACAAGCCTTGTTCAGTTAG", + "dna_sequence_length": 636, + "functions": [ + "arginine transporter" + ], + "id": "CDS_2880", + "location": [ + [ + "NC_000913", + 3068808, + "-", + 636 + ] + ], + "md5": "b39f30b1aec765edd5e336525eb16e11", + "parent_gene": "", + "protein_md5": "1f9a8356d1f4271503b6a7b636a7aec2", + "protein_translation": "MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAEVMKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLALLAAWLAPRLRTAKAQRIINLVVGCVMWFIALQLARDGIAHAQALFS", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009595" + ], + [ + "gene_synonym", + "ECK2920" + ], + [ + "gene_synonym", + "EcoGene:EG11160" + ], + [ + "gene_synonym", + "GI:16130825" + ], + [ + "gene_synonym", + "GeneID:947416" + ], + [ + "gene_synonym", + "JW2891" + ], + [ + "gene_synonym", + "NP_417399.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0S1" + ], + [ + "gene_synonym", + "b2924" + ], + [ + "gene_synonym", + "mscS" + ], + [ + "gene_synonym", + "yggB" + ] + ], + "dna_sequence": "ATGGAAGATTTGAATGTTGTCGATAGCATAAACGGCGCGGGAAGCTGGCTGGTAGCTAACCAGGCGCTGCTGCTAAGTTATGCAGTAAACATCGTGGCGGCACTCGCGATCATCATCGTTGGTTTGATTATCGCGCGGATGATTTCCAACGCGGTGAATCGCCTGATGATCTCCCGTAAAATCGATGCCACTGTTGCTGATTTTCTTTCTGCATTAGTCCGTTACGGTATTATCGCCTTTACGCTAATCGCTGCACTGGGACGCGTGGGTGTACAAACCGCGTCAGTCATTGCTGTACTCGGTGCCGCAGGCTTAGCTGTTGGTCTGGCTTTGCAGGGGTCACTGTCTAACCTGGCCGCTGGCGTGTTACTTGTCATGTTCCGCCCGTTCCGTGCCGGAGAATATGTTGACCTGGGCGGCGTAGCCGGTACTGTGCTGAGTGTGCAGATTTTCTCCACCACCATGCGTACTGCAGACGGTAAAATTATCGTTATTCCGAACGGTAAAATTATTGCCGGAAATATTATTAACTTCTCCCGCGAGCCAGTTCGCCGTAACGAATTTATTATTGGCGTGGCGTATGATTCCGATATCGATCAGGTTAAGCAGATCCTGACCAATATTATCCAGTCTGAAGATCGCATTTTGAAAGATCGCGAAATGACTGTGCGCCTGAACGAACTTGGTGCATCGTCGATTAATTTCGTGGTCCGCGTCTGGAGCAACAGCGGCGATCTGCAAAACGTGTACTGGGATGTGCTGGAGCGTATTAAACGTGAATTTGATGCCGCCGGTATCAGCTTCCCGTACCCGCAAATGGATGTGAACTTTAAGCGGGTGAAAGAAGACAAAGCTGCGTAA", + "dna_sequence_length": 861, + "functions": [ + "mechanosensitive channel protein, small conductance" + ], + "id": "CDS_2881", + "location": [ + [ + "NC_000913", + 3069807, + "-", + 861 + ] + ], + "md5": "57101d9253a31a16e871dcdb3b8e52b4", + "parent_gene": "", + "protein_md5": "3f5066a57f5874d23b5e7683e1774555", + "protein_translation": "MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009600" + ], + [ + "gene_synonym", + "ECK2921" + ], + [ + "gene_synonym", + "EcoGene:EG10282" + ], + [ + "gene_synonym", + "GI:16130826" + ], + [ + "gene_synonym", + "GeneID:947415" + ], + [ + "gene_synonym", + "JW2892" + ], + [ + "gene_synonym", + "NP_417400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB71" + ], + [ + "gene_synonym", + "ald" + ], + [ + "gene_synonym", + "b2925" + ], + [ + "gene_synonym", + "fba" + ], + [ + "gene_synonym", + "fbaA" + ], + [ + "gene_synonym", + "fda" + ] + ], + "dna_sequence": "ATGTCTAAGATTTTTGATTTCGTAAAACCTGGCGTAATCACTGGTGATGACGTACAGAAAGTTTTCCAGGTAGCAAAAGAAAACAACTTCGCACTGCCAGCAGTAAACTGCGTCGGTACTGACTCCATCAACGCCGTACTGGAAACCGCTGCTAAAGTTAAAGCGCCGGTTATCGTTCAGTTCTCCAACGGTGGTGCTTCCTTTATCGCTGGTAAAGGCGTGAAATCTGACGTTCCGCAGGGTGCTGCTATCCTGGGCGCGATCTCTGGTGCGCATCACGTTCACCAGATGGCTGAACATTATGGTGTTCCGGTTATCCTGCACACTGACCACTGCGCGAAGAAACTGCTGCCGTGGATCGACGGTCTGTTGGACGCGGGTGAAAAACACTTCGCAGCTACCGGTAAGCCGCTGTTCTCTTCTCACATGATCGACCTGTCTGAAGAATCTCTGCAAGAGAACATCGAAATCTGCTCTAAATACCTGGAGCGCATGTCCAAAATCGGCATGACTCTGGAAATCGAACTGGGTTGCACCGGTGGTGAAGAAGACGGCGTGGACAACAGCCACATGGACGCTTCTGCACTGTACACCCAGCCGGAAGACGTTGATTACGCATACACCGAACTGAGCAAAATCAGCCCGCGTTTCACCATCGCAGCGTCCTTCGGTAACGTACACGGTGTTTACAAGCCGGGTAACGTGGTTCTGACTCCGACCATCCTGCGTGATTCTCAGGAATATGTTTCCAAGAAACACAACCTGCCGCACAACAGCCTGAACTTCGTATTCCACGGTGGTTCCGGTTCTACTGCTCAGGAAATCAAAGACTCCGTAAGCTACGGCGTAGTAAAAATGAACATCGATACCGATACCCAATGGGCAACCTGGGAAGGCGTTCTGAACTACTACAAAGCGAACGAAGCTTATCTGCAGGGTCAGCTGGGTAACCCGAAAGGCGAAGATCAGCCGAACAAGAAATACTACGATCCGCGCGTATGGCTGCGTGCCGGTCAGACTTCGATGATCGCTCGTCTGGAGAAAGCATTCCAGGAACTGAACGCGATCGACGTTCTGTAA", + "dna_sequence_length": 1080, + "functions": [ + "fructose-bisphosphate aldolase, class II" + ], + "id": "CDS_2882", + "location": [ + [ + "NC_000913", + 3071244, + "-", + 1080 + ] + ], + "md5": "a28d42b9b791fa8065ea1571b4741003", + "parent_gene": "", + "protein_md5": "2850d15ff93041e80764356a1cb98b51", + "protein_translation": "MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009605" + ], + [ + "gene_synonym", + "ECK2922" + ], + [ + "gene_synonym", + "EcoGene:EG10703" + ], + [ + "gene_synonym", + "GI:16130827" + ], + [ + "gene_synonym", + "GeneID:947414" + ], + [ + "gene_synonym", + "JW2893" + ], + [ + "gene_synonym", + "NP_417401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A799" + ], + [ + "gene_synonym", + "b2926" + ], + [ + "gene_synonym", + "pgk" + ] + ], + "dna_sequence": "ATGTCTGTAATTAAGATGACCGATCTGGATCTTGCTGGGAAACGTGTATTTATCCGTGCGGATCTGAACGTACCAGTAAAAGACGGGAAAGTAACCAGCGACGCGCGTATCCGTGCTTCTCTGCCGACCATCGAACTGGCCCTGAAACAAGGCGCAAAAGTGATGGTAACTTCCCACCTGGGTCGTCCTACCGAAGGCGAGTACAACGAAGAATTCTCTCTGCTGCCGGTTGTTAACTACCTGAAAGACAAACTGTCTAACCCGGTTCGTCTGGTTAAAGATTACCTCGACGGCGTTGACGTTGCTGAAGGTGAACTGGTTGTTCTGGAAAACGTTCGCTTCAACAAAGGCGAGAAGAAAGACGACGAAACCCTGTCCAAAAAATACGCTGCACTGTGTGACGTGTTCGTAATGGACGCATTCGGTACTGCTCACCGCGCGCAGGCTTCTACTCACGGTATCGGTAAATTCGCTGACGTTGCGTGCGCAGGCCCGCTGCTGGCAGCTGAACTGGACGCGCTGGGTAAAGCACTGAAAGAACCTGCTCGCCCGATGGTGGCTATCGTTGGTGGTTCTAAAGTATCTACCAAACTGACCGTTCTGGACTCCCTGTCTAAAATCGCTGACCAGCTGATTGTTGGTGGTGGTATCGCTAACACCTTTATCGCGGCACAAGGCCACGATGTGGGTAAATCCCTGTACGAAGCTGACCTGGTTGACGAAGCTAAACGTCTGCTGACCACCTGCAACATCCCGGTTCCGTCTGATGTTCGCGTAGCAACCGAGTTCTCTGAAACTGCACCGGCTACCCTGAAATCTGTTAACGATGTGAAAGCTGACGAGCAGATCCTGGATATCGGTGATGCTTCCGCTCAGGAACTGGCTGAAATCCTGAAGAATGCGAAAACCATTCTGTGGAACGGTCCGGTTGGCGTGTTCGAATTCCCGAACTTCCGCAAAGGTACTGAAATCGTGGCTAACGCTATCGCAGACAGCGAAGCGTTCTCCATCGCTGGCGGCGGCGACACTCTGGCAGCAATCGACCTGTTCGGCATTGCTGACAAAATCTCCTACATCTCCACTGGCGGCGGCGCATTCCTCGAATTCGTGGAAGGTAAAGTACTGCCTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAA", + "dna_sequence_length": 1164, + "functions": [ + "phosphoglycerate kinase" + ], + "id": "CDS_2883", + "location": [ + [ + "NC_000913", + 3072622, + "-", + 1164 + ] + ], + "md5": "fe91d7ce3676c33c1a47b8e1d503cb78", + "parent_gene": "", + "protein_md5": "aff29f0997aaf745c2d595a81522ee3f", + "protein_translation": "MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009607" + ], + [ + "gene_synonym", + "ECK2923" + ], + [ + "gene_synonym", + "EcoGene:EG10368" + ], + [ + "gene_synonym", + "GI:16130828" + ], + [ + "gene_synonym", + "GeneID:947413" + ], + [ + "gene_synonym", + "JW2894" + ], + [ + "gene_synonym", + "NP_417402.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9B6" + ], + [ + "gene_synonym", + "b2927" + ], + [ + "gene_synonym", + "epd" + ], + [ + "gene_synonym", + "gapB" + ] + ], + "dna_sequence": "ATGACCGTACGCGTAGCGATAAATGGCTTCGGTCGCATCGGGCGTAATGTGGTTCGTGCTTTGTATGAATCCGGACGCCGGGCGGAAATTACCGTGGTGGCAATCAACGAACTGGCGGATGCTGCGGGCATGGCGCATTTGTTGAAATATGACACCAGCCATGGCCGTTTTGCATGGGAAGTACGACAGGAACGCGATCAACTTTTTGTTGGTGATGACGCCATCCGCGTATTGCATGAACGTTCACTGCAATCGCTCCCCTGGCGTGAACTTGGCGTTGATGTAGTCCTCGACTGCACCGGCGTATATGGCTCCCGCGAGCATGGCGAAGCGCATATTGCCGCCGGGGCCAAAAAAGTGCTCTTTTCACATCCTGGCAGTAACGATCTCGACGCGACCGTTGTTTACGGCGTCAATCAGGATCAACTTCGTGCGGAACACCGCATCGTTTCTAACGCTTCCTGTACCACGAATTGCATAATTCCCGTCATCAAATTGTTAGATGATGCGTACGGTATTGAGTCCGGCACTGTGACCACAATTCACTCCGCCATGCACGATCAACAGGTTATTGATGCATACCATCCTGACCTGCGTCGCACCCGGGCAGCCAGCCAGTCGATCATTCCGGTCGATACTAAACTGGCCGCCGGTATCACACGATTTTTTCCGCAATTTAACGATCGCTTTGAAGCGATTGCGGTACGTGTGCCAACCATAAATGTGACGGCAATCGATTTAAGCGTGACGGTGAAGAAACCTGTAAAAGCCAATGAAGTCAACCTGTTGCTGCAAAAAGCAGCACAAGGTGCATTTCATGGTATAGTTGACTATACGGAATTGCCGTTGGTCTCTGTAGATTTTAACCACGATCCGCACAGTGCCATTGTCGATGGCACCCAAACCCGGGTCAGTGGCGCACACCTGATCAAAACGTTGGTCTGGTGCGATAACGAATGGGGCTTTGCTAACCGAATGCTCGACACGACGTTAGCTATGGCTACTGTTGCTTTCAGGTAA", + "dna_sequence_length": 1020, + "functions": [ + "D-erythrose 4-phosphate dehydrogenase" + ], + "id": "CDS_2884", + "location": [ + [ + "NC_000913", + 3073691, + "-", + 1020 + ] + ], + "md5": "58126da52cff7368a8b09fdf5af7c841", + "parent_gene": "", + "protein_md5": "e0183ec78b17e4f81371cbead6b912d1", + "protein_translation": "MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVAFR", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009610" + ], + [ + "gene_synonym", + "ECK2924" + ], + [ + "gene_synonym", + "EcoGene:EG11161" + ], + [ + "gene_synonym", + "GI:16130829" + ], + [ + "gene_synonym", + "GeneID:947419" + ], + [ + "gene_synonym", + "JW2895" + ], + [ + "gene_synonym", + "NP_417403.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11664" + ], + [ + "gene_synonym", + "b2928" + ], + [ + "gene_synonym", + "yggC" + ] + ], + "dna_sequence": "GTGAAAATTGAATTAACGGTGAATGGGCTGAAGATACAGGCACAGTACCAGAACGAAGAGATTGAAAATGTACATAAACCGTTGCTGCACATGTTGGCGGCCTTACAGACGGTAAATCCGCAGCGGCGTACGGTGGTTTTTCTTTGCGCTCCGCCGGGGACGGGTAAATCAACCCTAACCACCTTCTGGGAATATCTCGCGCAACAAGACCCGGAACTGCCCGCTATTCAGACGCTCCCGATGGATGGTTTTCACCATTACAATAGCTGGCTGGATGCGCATCAATTGCGCCCCTTCAAAGGCGCACCAGAGACATTTGACGTTGCGAAACTGACGGAAAATCTGCGCCAGGTCGTGGAAGGGGATTGTACGTGGCCGCAGTACGATCGACAAAAGCATGATCCTGTTGAAGATGCGTTGCACGTTACCGCACCACTCGTCATCGTCGAAGGAAACTGGTTGTTACTGGATGATGAAAAGTGGCTGGAGTTGGCATCTTTCTGCGATTTTTCTATTTTTATTCATGCACCTGCTCAAATTCTGCGGGAGCGCTTGATTAGTCGTAAAATTGCGGGAGGATTAACGCGGCAAGTAGCCGAAGCATTTTATGCCCGCACCGATGGCCCCAATGTCGAGCGTGTGCTGATGAATAGCCGTCAGGCCAATCTGATAGTAGAGATGACTGAAGAAGGCCGGTATCACTTCACAAGCTGA", + "dna_sequence_length": 714, + "functions": [ + "putative PanK family P-loop kinase" + ], + "id": "CDS_2885", + "location": [ + [ + "NC_000913", + 3074689, + "-", + 714 + ] + ], + "md5": "3d5a2ec6b03a1bcc0689a15c9f772abb", + "parent_gene": "", + "protein_md5": "26bfbf83a063cddf74905f0cb1f3b3fa", + "protein_translation": "MKIELTVNGLKIQAQYQNEEIENVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISRKIAGGLTRQVAEAFYARTDGPNVERVLMNSRQANLIVEMTEEGRYHFTS", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009612" + ], + [ + "gene_synonym", + "ECK2925" + ], + [ + "gene_synonym", + "EcoGene:EG11162" + ], + [ + "gene_synonym", + "GI:16130830" + ], + [ + "gene_synonym", + "GeneID:946861" + ], + [ + "gene_synonym", + "JW2896" + ], + [ + "gene_synonym", + "NP_417404.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11663" + ], + [ + "gene_synonym", + "b2929" + ], + [ + "gene_synonym", + "yggD" + ] + ], + "dna_sequence": "ATGGCGACGCTGACAGAAGATGATGTGCTTGAGCAACTGGATGCACAGGACAATTTATTTTCATTTATGAAAACTGCGCATACCATTTTGCTCCAGGGGATACGCCAGTTTCTGCCGTCGCTGTTTGTCGATAACGATGAAGAGATCGTGGAATATGCAGTGAAGCCGTTACTCGCCCAAAGCGGCCCGCTTGACGATATTGATGTTGCACTGCGTTTGATTTATGCGTTGGGGAAAATGGATAAATGGTTGTACGCCGATATCACGCATTTTTCCCAGTTCTGGCATTACCTGAACGAACAGGATGAAACGCCCGGATTTGCCGATGACATGACCTGGGATTTTATCAGCAACGTCAATAGCATAACCCGCAATGCGATGCTCTATGACGCGTTAAAAGCGATGAAGTTCGCTGATTTCTCCGTCTGGTCAGAGGCGCGTTTTAGCGGAATGGTCAAAACGGCGCTGACGCTGGCAGTAACGACCACCTTAAAGGAATTAACGCCGTGA", + "dna_sequence_length": 510, + "functions": [ + "MtlR family putative transcriptional repressor" + ], + "id": "CDS_2886", + "location": [ + [ + "NC_000913", + 3075195, + "-", + 510 + ] + ], + "md5": "9fa092b1c22cf4dce52c2ba678b1e0e6", + "parent_gene": "", + "protein_md5": "51e2fa066fc9a29add8a19230669a6b2", + "protein_translation": "MATLTEDDVLEQLDAQDNLFSFMKTAHTILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFSVWSEARFSGMVKTALTLAVTTTLKELTP", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009615" + ], + [ + "gene_synonym", + "ECK2926" + ], + [ + "gene_synonym", + "EcoGene:EG11245" + ], + [ + "gene_synonym", + "GI:16130831" + ], + [ + "gene_synonym", + "GeneID:947410" + ], + [ + "gene_synonym", + "JW2897" + ], + [ + "gene_synonym", + "NP_417405.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21437" + ], + [ + "gene_synonym", + "b2930" + ], + [ + "gene_synonym", + "yggF" + ], + [ + "gene_synonym", + "yggK" + ] + ], + "dna_sequence": "ATGATGTCCCTGGCGTGGCCATTATTTCGCGTTACGGAACAGGCAGCGTTGGCTGCCTGGCCGCAAACCGGATGTGGCGACAAAAATAAAATTGATGGCCTGGCGGTCACCGCGATGCGCCAGGCATTAAACGACGTCGCTTTTCGTGGACGAGTGGTTATCGGCGAAGGAGAAATTGACCATGCGCCGATGCTGTGGATTGGCGAAGAGGTGGGCAAAGGCGATGGGCCAGAAGTCGATATCGCGGTTGATCCCATTGAAGGCACGCGGATGGTGGCGATGGGGCAGAGCAATGCGCTGGCGGTCATGGCTTTCGCCCCTCGAGATAGCCTGTTACATGCGCCCGATATGTATATGAAAAAGCTGGTTGTTAATCGGCTGGCGGCGGGCGCGATTGATCTGTCTTTGCCTCTGACGGACAACCTGCGCAACGTGGCGAAAGCGTTAGGCAAACCGCTGGATAAGCTGCGCATGGTTACGCTGGATAAACCGCGCCTGAGTGCCGCGATTGAGGAAGCAACACAGCTGGGCGTGAAGGTTTTTGCCCTGCCGGATGGCGATGTCGCCGCCAGCGTGCTGACCTGCTGGCAGGATAATCCTTACGATGTGATGTACACCATCGGCGGTGCGCCAGAAGGCGTGATTTCTGCCTGTGCCGTTAAAGCATTAGGCGGGGATATGCAGGCCGAGCTGATTGACTTTTGCCAGGCTAAAGGGGATTACACGGAAAATCGGCAGATTGCAGAGCAGGAGCGCAAGCGTTGCAAGGCAATGGGCGTTGACGTTAACCGTGTGTACTCGCTCGATGAACTGGTGAGGGGGAACGATATCCTCTTTAGCGCTACGGGCGTGACGGGCGGTGAGCTGGTGAACGGTATCCAACAGACGGCGAATGGGGTGCGGACGCAGACATTACTGATCGGCGGCGCGGACCAAACGTGTAATATAATAGACTCCCTGCATTGA", + "dna_sequence_length": 966, + "functions": [ + "fructose 1,6 bisphosphatase isozyme" + ], + "id": "CDS_2887", + "location": [ + [ + "NC_000913", + 3076182, + "-", + 966 + ] + ], + "md5": "280e03f9553b61fe3379bc0cc1d6f20a", + "parent_gene": "", + "protein_md5": "b3e81f00d7d1e583ef27fcbc0816d6a1", + "protein_translation": "MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMKKLVVNRLAAGAIDLSLPLTDNLRNVAKALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGDYTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174095" + ], + [ + "gene_synonym", + "ECK2927" + ], + [ + "gene_synonym", + "EcoGene:EG12976" + ], + [ + "gene_synonym", + "GI:49176285" + ], + [ + "gene_synonym", + "GeneID:2847686" + ], + [ + "gene_synonym", + "JW5477" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52048" + ], + [ + "gene_synonym", + "YP_026187.1" + ], + [ + "gene_synonym", + "b4465" + ], + [ + "gene_synonym", + "yggP" + ] + ], + "dna_sequence": "ATGAAAACCAAAGTTGCTGCTATTTATGGCAAGCGGGATGTCCGTCTGCGCGTATTTGAACTGCCAGAAATTACCGATAATGAATTACTGGTGAGTGTAATTTCTGACAGCGTCTGTTTATCGACCTGGAAAGCGGCGTTACTCGGTAGTGAACATAAACGCGTACCCGACGATTTAGAAAATCATCCGGTCATTACCGGGCATGAATGTGCCGGGGTTATTGTCGAAGTGGGTAAAAATCTCACTGGCAAATATAAAAAAGGCCAGCGTTTTGTATTGCAACCGGCGATGGGGTTACCAAGCGGATATTCAGCGGGCTACAGCTACGAATATTTTGGCGGCAATGCCACTTATATGATTATTCCCGAAATCGCCATTAATTTGGGCTGCGTATTACCGTATCACGGCTCTTATTTTGCTGCGGCGTCGCTGGCAGAGCCTATGTGCTGCATTATTGGTGCTTATCATGCCAATTATCACACCACGCAATATGTTTATGAGCATCGCATGGGCGTCAAACCTGGCGGCAATATTGCACTGCTGGCGTGTGCAGGTCCGATGGGCATTGGCGCTATCGATTACGCCATTAACGGCGGCATACAACCGTCGCGGGTGGTGGTGGTCGATATCGACGACAAACGTCTGGCGCAGGTACAGAAGCTGCTGCCGGTGGAACTGGCGGCCAGTAAAGGCATTGAGCTGGTGTATGTGAATACCAAAGGGATGAGCGATCCTGTCCAGATGCTGCGGGCGCTGACAGGAGATGCCGGGTTCGATGACATTTTTGTTTATGCGGCGGTGCCTGCTGTCGTTGAGATGGCTGATGAATTACTGGCGGAAGATGGCTGTCTGAACTTCTTTGCCGGGCCGACGGATAAAAACTTCAAAGTGCCGTTTAATTTCTACAACGTCCATTACAACAGCACGCACGTCGTCGGTACATCTGGCGGTTCAACGGACGACATGAAAGAGGCGATTGCCCTTAGCGCCACTGGGCAGTTACAGCCGTCGTTTATGGTGACCCATATCGGTGGCCTGGATGCGGTGCCAGAAACCGTGCTCAATCTGCCGGATATCCCTGGCGGTAAAAAACTCATTTATAACGGCGTGACCATGCCGCTCACTGCCATTGCCGATTTTGCCGAAAAAGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGGTTGAGGAAACGCACGGCATCTGGAATGAACAGGCCGAGAAATATCTGCTGGCACAATTTGGCGTTGATATCGGGGAGGCCGCGCAATGA", + "dna_sequence_length": 1278, + "functions": [ + "putative Zn-binding dehydrogenase" + ], + "id": "CDS_2888", + "location": [ + [ + "NC_000913", + 3077456, + "-", + 1278 + ] + ], + "md5": "883994c13fcf4322dc06354178939c3f", + "parent_gene": "", + "protein_md5": "e9173a627d8ab274d59a2d0af31af9d0", + "protein_translation": "MKTKVAAIYGKRDVRLRVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEETHGIWNEQAEKYLLAQFGVDIGEAAQ", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009621" + ], + [ + "gene_synonym", + "ECK2928" + ], + [ + "gene_synonym", + "EcoGene:EG11792" + ], + [ + "gene_synonym", + "GI:16130834" + ], + [ + "gene_synonym", + "GeneID:945256" + ], + [ + "gene_synonym", + "JW2900" + ], + [ + "gene_synonym", + "NP_417408.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69826" + ], + [ + "gene_synonym", + "b2933" + ], + [ + "gene_synonym", + "cmtA" + ] + ], + "dna_sequence": "ATGGAAAACAAGTCTGCTCGTGCAAAGGTCCAGGCTTTTGGGGGCTTTTTGACTGCAATGGTCATCCCCAATATTGGTGCTTTTATTGCCTGGGGTTTTATTACTGCGTTATTTATTCCCACCGGTTGGCTGCCTAACGAACATTTCGCCAAAATTGTCGGCCCGATGATTACCTATTTATTGCCCGTGATGATTGGTTCTACAGGTGGTCATCTGGTCGGCGGTAAACGCGGGGCGGTCATGGGCGGAATAGGTACTATTGGTGTGATCGTTGGCGCAGAGATCCCGATGTTCCTTGGCTCAATGATCATGGGGCCGCTCGGTGGGTTGGTCATAAAATATGTCGATAAGGCACTGGAAAAACGCATACCTGCCGGTTTTGAGATGGTTATCAATAACTTCTCATTAGGTATCGCGGGGATGCTCCTTTGTCTGCTGGGTTTTGAAGTTATCGGCCCGGCGGTGTTAATTGCCAATACTTTCGTCAAAGAGTGTATTGAGGCGCTGGTACATGCGGGTTATCTGCCATTGTTGTCAGTCATCAATGAACCGGCGAAAGTGCTTTTCCTCAATAATGCGATCGATCAGGGCGTCTATTATCCGCTGGGAATGCAACAGGCTTCGGTTAACGGTAAATCCATCTTCTTTATGGTGGCCTCTAACCCAGGTCCGGGCCTGGGGCTGCTGCTGGCGTTTACCTTGTTTGGTAAAGGGATGAGTAAACGTTCTGCGCCCGGGGCGATGATTATTCACTTCCTCGGTGGGATCCACGAACTGTATTTCCCGTATGTGCTGATGAAGCCGCTGACCATTATTGCCATGATTGCGGGCGGTATGTCTGGCACCTGGATGTTTAACTTACTGGACGGTGGTCTGGTGGCTGGCCCAAGTCCGGGGTCTATCTTTGCTTACCTGGCACTGACGCCGAAAGGCTCGTTCCTGGCGACAATTGCCGGTGTTACGGTAGGTACCCTGGTGTCCTTTGCTATTACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAACGGAGAGCGAAGATGAGTTTGCTCAGTCAGCCAATGCGGTTAAGGCGATGAAACAAGAGGGTGCATTCTCGTTAAGCAGGGTTAAGCGTATCGCCTTTGTTTGCGATGCGGGGATGGGCTCCAGTGCGATGGGCGCGACCACCTTCCGTAAACGCCTGGAAAAAGCGGGGCTGGCAATTGAAGTAAAACATTACGCCATAGAAAACGTGCCTGCGGATGCGGATATCGTCGTTACTCATGCCAGTCTGGAAGGGCGCGTGAAACGTGTGACGGATAAACCACTGATATTGATTAATAACTATATTGGCGATCCAAAACTCGACACTTTATTTAATCAATTAACCGCCGAACATAAACACTGA", + "dna_sequence_length": 1389, + "functions": [ + "putative mannitol-specific PTS IIB and IIC components" + ], + "id": "CDS_2889", + "location": [ + [ + "NC_000913", + 3078859, + "-", + 1389 + ] + ], + "md5": "b9150f607ab27172934d3cc9eee0cf2a", + "parent_gene": "", + "protein_md5": "8ce8ec0d6ea47d9d398fe9ac61320dc1", + "protein_translation": "MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH", + "protein_translation_length": 462, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009623" + ], + [ + "gene_synonym", + "ECK2929" + ], + [ + "gene_synonym", + "EcoGene:EG11791" + ], + [ + "gene_synonym", + "GI:16130835" + ], + [ + "gene_synonym", + "GeneID:945125" + ], + [ + "gene_synonym", + "JW2901" + ], + [ + "gene_synonym", + "NP_417409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69824" + ], + [ + "gene_synonym", + "b2934" + ], + [ + "gene_synonym", + "cmtB" + ], + [ + "gene_synonym", + "tolM" + ] + ], + "dna_sequence": "ATGCGGCTTAGTGATTATTTTCCAGAATCATCAATCTCAGTTATACATTCAGCAAAAGATTGGCAGGAAGCTATCGATTTCTCGATGGTATCATTGCTGGATAAAAACTATATCAGCGAGAATTACATTCAGGCAATTAAAGATTCCACCATTAACAATGGCCCTTATTATATTCTCGCACCAGGCGTGGCAATGCCTCATGCGCGACCGGAATGTGGGGCGCTTAAAACCGGGATGTCTTTGACATTACTTGAACAAGGTGTTTATTTTCCGGGGAATGACGAACCAATTAAATTACTCATCGGACTCTCTGCTGCCGATGCCGATTCGCACATTGGCGCTATTCAGGCGTTAAGTGAATTACTGTGCGAAGAAGAAATACTCGAACAACTCTTAACAGCATCATCAGAAAAACAATTAGCGGACATTATCAGCCGCGGATAA", + "dna_sequence_length": 444, + "functions": [ + "putative mannitol-specific enzyme IIA component of PTS" + ], + "id": "CDS_2890", + "location": [ + [ + "NC_000913", + 3079330, + "-", + 444 + ] + ], + "md5": "413278807ff6fec5c08db355bddfd37a", + "parent_gene": "", + "protein_md5": "69bb77a7a3d14d6a6f90fb3064cadc4e", + "protein_translation": "MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009625" + ], + [ + "gene_synonym", + "ECK2930" + ], + [ + "gene_synonym", + "EcoGene:EG11427" + ], + [ + "gene_synonym", + "GI:49176286" + ], + [ + "gene_synonym", + "GeneID:947420" + ], + [ + "gene_synonym", + "JW5478" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27302" + ], + [ + "gene_synonym", + "YP_026188.1" + ], + [ + "gene_synonym", + "b2935" + ], + [ + "gene_synonym", + "tkt" + ], + [ + "gene_synonym", + "tktA" + ] + ], + "dna_sequence": "ATGTCCTCACGTAAAGAGCTTGCCAATGCTATTCGTGCGCTGAGCATGGACGCAGTACAGAAAGCCAAATCCGGTCACCCGGGTGCCCCTATGGGTATGGCTGACATTGCCGAAGTCCTGTGGCGTGATTTCCTGAAACACAACCCGCAGAATCCGTCCTGGGCTGACCGTGACCGCTTCGTGCTGTCCAACGGCCACGGCTCCATGCTGATCTACAGCCTGCTGCACCTCACCGGTTACGATCTGCCGATGGAAGAACTGAAAAACTTCCGTCAGCTGCACTCTAAAACTCCGGGTCACCCGGAAGTGGGTTACACCGCTGGTGTGGAAACCACCACCGGTCCGCTGGGTCAGGGTATTGCCAACGCAGTCGGTATGGCGATTGCAGAAAAAACGCTGGCGGCGCAGTTTAACCGTCCGGGCCACGACATTGTCGACCACTACACCTACGCCTTCATGGGCGACGGCTGCATGATGGAAGGCATCTCCCACGAAGTTTGCTCTCTGGCGGGTACGCTGAAGCTGGGTAAACTGATTGCATTCTACGATGACAACGGTATTTCTATCGATGGTCACGTTGAAGGCTGGTTCACCGACGACACCGCAATGCGTTTCGAAGCTTACGGCTGGCACGTTATTCGCGACATCGACGGTCATGACGCGGCATCTATCAAACGCGCAGTAGAAGAAGCGCGCGCAGTGACTGACAAACCTTCCCTGCTGATGTGCAAAACCATCATCGGTTTCGGTTCCCCGAACAAAGCCGGTACCCACGACTCCCACGGTGCGCCGCTGGGCGACGCTGAAATTGCCCTGACCCGCGAACAACTGGGCTGGAAATATGCGCCGTTCGAAATCCCGTCTGAAATCTATGCTCAGTGGGATGCGAAAGAAGCAGGCCAGGCGAAAGAATCCGCATGGAACGAGAAATTCGCTGCTTACGCGAAAGCTTATCCGCAGGAAGCCGCTGAATTTACCCGCCGTATGAAAGGCGAAATGCCGTCTGACTTCGACGCTAAAGCGAAAGAGTTCATCGCTAAACTGCAGGCTAATCCGGCGAAAATCGCCAGCCGTAAAGCGTCTCAGAATGCTATCGAAGCGTTCGGTCCGCTGTTGCCGGAATTCCTCGGCGGTTCTGCTGACCTGGCGCCGTCTAACCTGACCCTGTGGTCTGGTTCTAAAGCAATCAACGAAGATGCTGCGGGTAACTACATCCACTACGGTGTTCGCGAGTTCGGTATGACCGCGATTGCTAACGGTATCTCCCTGCACGGTGGCTTCCTGCCGTACACCTCCACCTTCCTGATGTTCGTGGAATACGCACGTAACGCCGTACGTATGGCTGCGCTGATGAAACAGCGTCAGGTGATGGTTTACACCCACGACTCCATCGGTCTGGGCGAAGACGGCCCGACTCACCAGCCGGTTGAGCAGGTCGCTTCTCTGCGCGTAACCCCGAACATGTCTACATGGCGTCCGTGTGACCAGGTTGAATCCGCGGTCGCGTGGAAATACGGTGTTGAGCGTCAGGACGGCCCGACCGCACTGATCCTCTCCCGTCAGAACCTGGCGCAGCAGGAACGAACTGAAGAGCAACTGGCAAACATCGCGCGCGGTGGTTATGTGCTGAAAGACTGCGCCGGTCAGCCGGAACTGATTTTCATCGCTACCGGTTCAGAAGTTGAACTGGCTGTTGCTGCCTACGAAAAACTGACTGCCGAAGGCGTGAAAGCGCGCGTGGTGTCCATGCCGTCTACCGACGCATTTGACAAGCAGGATGCTGCTTACCGTGAATCCGTACTGCCGAAAGCGGTTACTGCACGCGTTGCTGTAGAAGCGGGTATTGCTGACTACTGGTACAAGTATGTTGGCCTGAACGGTGCTATCGTCGGTATGACCACCTTCGGTGAATCTGCTCCGGCAGAGCTGCTGTTTGAAGAGTTCGGCTTCACTGTTGATAACGTTGTTGCGAAAGCAAAAGAACTGCTGTAA", + "dna_sequence_length": 1992, + "functions": [ + "transketolase 1, thiamine triphosphate-binding" + ], + "id": "CDS_2891", + "location": [ + [ + "NC_000913", + 3081635, + "-", + 1992 + ] + ], + "md5": "2ebcfae185d48ea5cbc96810e9c0a90b", + "parent_gene": "", + "protein_md5": "dccf3c9edddfd9e490612e563185c9b9", + "protein_translation": "MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL", + "protein_translation_length": 663, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009629" + ], + [ + "gene_synonym", + "ECK2931" + ], + [ + "gene_synonym", + "EcoGene:EG11291" + ], + [ + "gene_synonym", + "GI:90111514" + ], + [ + "gene_synonym", + "GeneID:945173" + ], + [ + "gene_synonym", + "JW2903" + ], + [ + "gene_synonym", + "NP_417411.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25894" + ], + [ + "gene_synonym", + "b2936" + ], + [ + "gene_synonym", + "loiP" + ], + [ + "gene_synonym", + "yggG" + ] + ], + "dna_sequence": "ATGAAAATTCGCGCCTTATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGCTAAACGTCTGACAACTATTGCCAATGCGCTAGGCAACAATATCAACGGTCAGCCGGTAAATTACAAAGTGTATATGGCGAAGGATGTGAACGCCTTTGCAATGGCTAACGGCTGTATCCGCGTCTATAGCGGGCTGATGGATATGATGACGGATAACGAAGTCGAAGCGGTGATCGGTCACGAAATGGGGCACGTGGCGTTAGGCCATGTGAAAAAAGGAATGCAGGTGGCACTTGGTACAAATGCCGTGCGAGTAGCTGCGGCCTCTGCGGGCGGGATTGTCGGAAGTTTATCTCAATCACAACTTGGTAATCTGGGCGAGAAATTAGTCAATTCGCAATTCTCCCAGCGCCAGGAAGCAGAAGCCGATGATTATTCTTACGATCTTCTGCGCCAACGCGGCATCAGCCCGGCAGGTCTTGCCACCAGCTTTGAAAAACTGGCAAAACTGGAAGAAGGTCGCCAAAGCTCAATGTTTGACGACCATCCTGCATCCGCCGAACGCGCCCAGCATATTCGCGATCGCATGAGCGCGGATGGGATTAAGTAA", + "dna_sequence_length": 759, + "functions": [ + "Phe-Phe periplasmic metalloprotease, OM lipoprotein", + "low salt-inducible", + "Era-binding heat shock protein" + ], + "id": "CDS_2892", + "location": [ + [ + "NC_000913", + 3081913, + "+", + 759 + ] + ], + "md5": "08f4e717e26f662f7134be0bb1c4f0fe", + "parent_gene": "", + "protein_md5": "5c9a05397a9e983ceb13bcff0c3df5f1", + "protein_translation": "MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGNLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009632" + ], + [ + "gene_synonym", + "ECK2932" + ], + [ + "gene_synonym", + "EcoGene:EG10960" + ], + [ + "gene_synonym", + "GI:16130838" + ], + [ + "gene_synonym", + "GeneID:947715" + ], + [ + "gene_synonym", + "JW2904" + ], + [ + "gene_synonym", + "NP_417412.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60651" + ], + [ + "gene_synonym", + "b2937" + ], + [ + "gene_synonym", + "speB" + ] + ], + "dna_sequence": "ATGAGCACCTTAGGTCATCAATACGATAACTCACTGGTTTCCAATGCCTTTGGTTTTTTACGCCTGCCGATGAACTTCCAGCCGTATGACAGCGATGCAGACTGGGTGATTACTGGCGTGCCGTTCGATATGGCCACTTCTGGTCGTGCGGGTGGTCGCCACGGTCCGGCAGCGATCCGTCAGGTTTCGACGAATCTGGCCTGGGAACACAACCGCTTCCCGTGGAATTTCGACATGCGTGAGCGTCTGAACGTCGTGGACTGCGGCGATCTGGTATATGCCTTTGGCGATGCCCGTGAGATGAGCGAAAAGCTGCAGGCGCACGCCGAGAAGCTGCTGGCTGCCGGTAAGCGTATGCTCTCTTTCGGTGGTGACCACTTTGTTACGCTGCCGCTGCTGCGTGCTCATGCGAAGCATTTCGGCAAAATGGCGCTGGTACACTTTGACGCCCACACCGATACCTATGCGAACGGTTGTGAATTTGACCACGGCACTATGTTCTATACCGCGCCGAAAGAAGGTCTGATCGACCCGAATCATTCCGTGCAGATTGGTATTCGTACCGAGTTTGATAAAGACAACGGCTTTACCGTGCTGGACGCCTGCCAGGTGAACGATCGCAGCGTGGATGACGTTATCGCCCAAGTGAAACAGATTGTGGGTGATATGCCGGTTTACCTGACTTTTGATATCGACTGCCTGGATCCTGCTTTTGCACCAGGCACCGGTACGCCAGTGATTGGCGGCCTGACCTCCGATCGCGCTATTAAACTGGTACGCGGCCTGAAAGATCTCAACATTGTTGGGATGGACGTAGTGGAAGTGGCTCCGGCATACGATCAGTCGGAAATCACTGCTCTGGCAGCGGCAACGCTGGCGCTGGAAATGCTGTATATTCAGGCGGCGAAAAAGGGCGAGTAA", + "dna_sequence_length": 921, + "functions": [ + "agmatinase" + ], + "id": "CDS_2893", + "location": [ + [ + "NC_000913", + 3083797, + "-", + 921 + ] + ], + "md5": "da639a8382dea14d32264172811bee04", + "parent_gene": "", + "protein_md5": "3ba845c9be72bc9c13e72f5f445d2750", + "protein_translation": "MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009634" + ], + [ + "gene_synonym", + "ECK2933" + ], + [ + "gene_synonym", + "EcoGene:EG10959" + ], + [ + "gene_synonym", + "GI:16130839" + ], + [ + "gene_synonym", + "GeneID:947432" + ], + [ + "gene_synonym", + "JW2905" + ], + [ + "gene_synonym", + "NP_417413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21170" + ], + [ + "gene_synonym", + "b2938" + ], + [ + "gene_synonym", + "speA" + ] + ], + "dna_sequence": "ATGTCTGACGACATGTCTATGGGTTTGCCTTCGTCAGCGGGCGAACACGGTGTACTACGCTCCATGCAGGAGGTTGCAATGAGCTCCCAGGAAGCCAGCAAGATGCTGCGTACTTACAATATTGCCTGGTGGGGCAATAACTACTATGACGTTAACGAGCTGGGCCACATTAGCGTGTGCCCGGACCCGGACGTCCCGGAAGCTCGCGTCGATCTCGCGCAGTTAGTGAAAACTCGTGAAGCACAGGGCCAGCGTCTGCCTGCACTGTTCTGTTTCCCACAGATCCTGCAGCACCGTTTGCGTTCCATTAACGCCGCGTTCAAACGTGCGAGGGAATCCTACGGCTATAACGGCGATTACTTCCTTGTTTATCCGATCAAAGTTAACCAGCACCGCCGCGTGATTGAGTCCCTGATTCATTCGGGCGAACCGCTGGGTCTGGAAGCCGGTTCCAAAGCCGAGTTGATGGCAGTACTGGCACATGCTGGCATGACCCGTAGCGTCATCGTCTGCAACGGTTATAAAGACCGCGAATATATCCGCCTGGCATTAATTGGCGAGAAGATGGGGCACAAGGTCTATCTGGTCATTGAGAAGATGTCAGAAATCGCCATTGTGCTGGATGAAGCAGAACGTCTGAATGTCGTTCCTCGTCTGGGCGTGCGTGCACGTCTGGCTTCGCAGGGTTCGGGTAAATGGCAGTCCTCCGGCGGGGAAAAATCGAAGTTCGGCCTGGCTGCGACTCAGGTACTGCAACTGGTTGAAACCCTGCGTGAAGCCGGGCGTCTCGACAGCCTGCAACTACTGCACTTCCACCTCGGTTCGCAGATGGCGAATATTCGCGATATCGCGACAGGCGTTCGTGAATCCGCGCGTTTCTATGTGGAACTGCACAAGCTGGGCGTCAATATTCAGTGCTTCGACGTCGGCGGCGGTCTGGGCGTGGATTATGAAGGTACTCGTTCGCAGTCCGACTGTTCGGTGAACTACGGCCTCAATGAATACGCCAACAACATTATCTGGGCGATTGGCGATGCGTGTGAAGAAAACGGTCTGCCGCATCCGACGGTAATCACCGAATCGGGTCGTGCGGTGACTGCGCATCACACCGTGCTGGTGTCTAATATCATCGGCGTGGAACGTAACGAATACACGGTGCCGACCGCGCCTGCAGAAGATGCGCCGCGCGCGCTGCAAAGCATGTGGGAAACCTGGCAGGAGATGCACGAACCGGGAACTCGCCGTTCTCTGCGTGAATGGTTACACGACAGTCAGATGGATCTGCACGACATTCATATCGGCTACTCTTCCGGCATCTTTAGCCTGCAAGAACGTGCATGGGCTGAGCAGCTTTATTTGAGCATGTGCCATGAAGTGCAAAAGCAGCTGGATCCGCAAAACCGTGCTCATCGTCCGATTATCGACGAGCTGCAGGAACGTATGGCGGACAAAATGTACGTCAACTTCTCGCTGTTCCAGTCGATGCCGGACGCATGGGGGATCGACCAGTTGTTCCCGGTTCTGCCGCTGGAAGGGCTGGATCAAGTGCCGGAACGTCGCGCTGTGCTGCTGGATATTACCTGTGACTCTGACGGTGCTATCGACCACTATATTGATGGTGACGGTATTGCCACGACAATGCCAATGCCGGAGTACGATCCAGAGAATCCGCCGATGCTCGGTTTCTTTATGGTCGGCGCATATCAGGAGATCCTCGGCAACATGCACAACCTGTTCGGTGATACCGAAGCGGTTGACGTGTTCGTCTTCCCTGACGGTAGCGTAGAAGTAGAACTGTCTGACGAAGGCGATACCGTGGCGGACATGCTGCAATATGTACAGCTCGATCCGAAAACGCTGTTAACCCAGTTCCGCGATCAAGTGAAGAAAACCGATCTTGATGCTGAACTGCAACAACAGTTCCTTGAAGAGTTCGAGGCAGGTTTGTACGGTTATACTTATCTTGAAGATGAGTAA", + "dna_sequence_length": 1977, + "functions": [ + "biosynthetic arginine decarboxylase, PLP-binding" + ], + "id": "CDS_2894", + "location": [ + [ + "NC_000913", + 3085911, + "-", + 1977 + ] + ], + "md5": "40b4dd5e44aa36718e870de2ddf14855", + "parent_gene": "", + "protein_md5": "202dc8fc4a86aba6613135dd9fb94db3", + "protein_translation": "MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE", + "protein_translation_length": 658, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009638" + ], + [ + "gene_synonym", + "ECK2934" + ], + [ + "gene_synonym", + "EcoGene:EG13164" + ], + [ + "gene_synonym", + "GI:145698307" + ], + [ + "gene_synonym", + "GeneID:947433" + ], + [ + "gene_synonym", + "JW2906" + ], + [ + "gene_synonym", + "NP_417414.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64567" + ], + [ + "gene_synonym", + "b2939" + ], + [ + "gene_synonym", + "yqgB" + ] + ], + "dna_sequence": "ATGAAAAAGAAACCGGTTGCGCAGTTGGAGCGTCAGCATTCACTGCTGGAAAATCCATGTGCTTATGGGTTGTTATCGCAGTTCCAGGCTGCGATAGTCGTTAACTGTTTTACACTTAATAAAATAATTTGA", + "dna_sequence_length": 132, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2895", + "location": [ + [ + "NC_000913", + 3086051, + "-", + 132 + ] + ], + "md5": "d517bbd409458a87575386f67642dda6", + "parent_gene": "", + "protein_md5": "73340d20313520da6931f65a511eadf0", + "protein_translation": "MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII", + "protein_translation_length": 43, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009643" + ], + [ + "gene_synonym", + "ECK2935" + ], + [ + "gene_synonym", + "EcoGene:EG13165" + ], + [ + "gene_synonym", + "GI:16130841" + ], + [ + "gene_synonym", + "GeneID:945052" + ], + [ + "gene_synonym", + "JW2907" + ], + [ + "gene_synonym", + "NP_417415.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64570" + ], + [ + "gene_synonym", + "b2940" + ], + [ + "gene_synonym", + "yqgC" + ] + ], + "dna_sequence": "ATGGGTATAACATCGGCAGGTATGCAAAGCAGAGATGCAGAGTGCGGGGAACGAATCTTCACCAGAACGGTGAGACAGGTTAAGCAGCAGACAACGGTTCATTATTTCGTATCACCTCCACGGCCGCCTGTTAAGACGAACCCACAAGCCAAAACTCTGATTTCAACCCGGCTGGAAGTGGCAACACGAAAGAAACGTCGTGTGCTTTTTATTTAA", + "dna_sequence_length": 216, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2896", + "location": [ + [ + "NC_000913", + 3086187, + "+", + 216 + ] + ], + "md5": "82c6bf741fc1c107a85cb772264bcd65", + "parent_gene": "", + "protein_md5": "e84f0f71a44ddde5fb2cdbae2a17602b", + "protein_translation": "MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPVKTNPQAKTLISTRLEVATRKKRRVLFI", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009650" + ], + [ + "gene_synonym", + "ECK2937" + ], + [ + "gene_synonym", + "EcoGene:EG10589" + ], + [ + "gene_synonym", + "GI:16130843" + ], + [ + "gene_synonym", + "GeneID:945389" + ], + [ + "gene_synonym", + "JW2909" + ], + [ + "gene_synonym", + "NP_417417.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A817" + ], + [ + "gene_synonym", + "b2942" + ], + [ + "gene_synonym", + "metK" + ], + [ + "gene_synonym", + "metX" + ] + ], + "dna_sequence": "ATGGCAAAACACCTTTTTACGTCCGAGTCCGTCTCTGAAGGGCATCCTGACAAAATTGCTGACCAAATTTCTGATGCCGTTTTAGACGCGATCCTCGAACAGGATCCGAAAGCACGCGTTGCTTGCGAAACCTACGTAAAAACCGGCATGGTTTTAGTTGGCGGCGAAATCACCACCAGCGCCTGGGTAGACATCGAAGAGATCACCCGTAACACCGTTCGCGAAATTGGCTATGTGCATTCCGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCGTCTGGTACAGCGTCAGGCTGAAGTGCGTAAAAACGGCACTCTGCCGTGGCTGCGCCCGGACGCGAAAAGCCAGGTGACTTTTCAGTATGACGACGGCAAAATCGTTGGTATCGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACGTTATGTCGCGAAAAACATCGTTGCTGCTGGCCTGGCCGATCGTTGTGAAATTCAGGTTTCCTACGCAATCGGCGTGGCTGAACCGACCTCCATCATGGTAGAAACTTTCGGTACTGAGAAAGTGCCTTCTGAACAACTGACCCTGCTGGTACGTGAGTTCTTCGACCTGCGCCCATACGGTCTGATTCAGATGCTGGATCTGCTGCACCCGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAA", + "dna_sequence_length": 1155, + "functions": [ + "S-adenosylmethionine synthetase" + ], + "id": "CDS_2897", + "location": [ + [ + "NC_000913", + 3086706, + "+", + 1155 + ] + ], + "md5": "cf110d9f7a89e0e19b599857a0ae5225", + "parent_gene": "", + "protein_md5": "6e54240b246735d5a285824d43665226", + "protein_translation": "MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009654" + ], + [ + "gene_synonym", + "ECK2938" + ], + [ + "gene_synonym", + "EcoGene:EG12148" + ], + [ + "gene_synonym", + "GI:16130844" + ], + [ + "gene_synonym", + "GeneID:947434" + ], + [ + "gene_synonym", + "JW2910" + ], + [ + "gene_synonym", + "NP_417418.1" + ], + [ + "gene_synonym", + "Pgal" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEP1" + ], + [ + "gene_synonym", + "b2943" + ], + [ + "gene_synonym", + "galP" + ] + ], + "dna_sequence": "ATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTCGGTGCGGTGGGCAGCGGCTGGCTCTCCTTTAAACTCGGGCGCAAAAAGAGCCTGATGATCGGCGCAATTTTGTTTGTTGCCGGTTCGCTGTTCTCTGCGGCTGCGCCAAACGTTGAAGTACTGATTCTTTCCCGCGTTCTACTGGGGCTGGCGGTGGGTGTGGCCTCTTATACCGCACCGCTGTACCTCTCTGAAATTGCGCCGGAAAAAATTCGTGGCAGTATGATCTCGATGTATCAGTTGATGATCACTATCGGGATCCTCGGTGCTTATCTTTCTGATACCGCCTTCAGCTACACCGGTGCATGGCGCTGGATGCTGGGTGTGATTATCATCCCGGCAATTTTGCTGCTGATTGGTGTCTTCTTCCTGCCAGACAGCCCACGTTGGTTTGCCGCCAAACGCCGTTTTGTTGATGCCGAACGCGTGCTGCTACGCCTGCGTGACACCAGCGCGGAAGCGAAACGCGAACTGGATGAAATCCGTGAAAGTTTGCAGGTTAAACAGAGTGGCTGGGCGCTGTTTAAAGAGAACAGCAACTTCCGCCGCGCGGTGTTCCTTGGCGTACTGTTGCAGGTAATGCAGCAATTCACCGGGATGAACGTCATCATGTATTACGCGCCGAAAATCTTCGAACTGGCGGGTTATACCAACACTACCGAGCAAATGTGGGGGACCGTGATTGTCGGCCTGACCAACGTACTTGCCACCTTTATCGCAATCGGCCTTGTTGACCGCTGGGGACGTAAACCAACGCTAACGCTGGGCTTCCTGGTGATGGCTGCTGGCATGGGCGTACTCGGTACAATGATGCATATCGGTATTCACTCTCCGTCGGCGCAGTATTTCGCCATCGCCATGCTGCTGATGTTTATTGTCGGTTTTGCCATGAGTGCCGGTCCGCTGATTTGGGTACTGTGCTCCGAAATTCAGCCGCTGAAAGGCCGCGATTTTGGCATCACCTGCTCCACTGCCACCAACTGGATTGCCAACATGATCGTTGGCGCAACGTTCCTGACCATGCTCAACACGCTGGGTAACGCCAACACCTTCTGGGTGTATGCGGCTCTGAACGTACTGTTTATCCTGCTGACATTGTGGCTGGTACCGGAAACCAAACACGTTTCGCTGGAACATATTGAACGTAATCTGATGAAAGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAA", + "dna_sequence_length": 1395, + "functions": [ + "D-galactose transporter" + ], + "id": "CDS_2898", + "location": [ + [ + "NC_000913", + 3088284, + "+", + 1395 + ] + ], + "md5": "d925959ee8337168819ab8efbac79cad", + "parent_gene": "", + "protein_md5": "fbf57f1403d47a941868a613ff5fdbf7", + "protein_translation": "MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAHD", + "protein_translation_length": 464, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009657" + ], + [ + "gene_synonym", + "ECK2939" + ], + [ + "gene_synonym", + "EcoGene:EG12122" + ], + [ + "gene_synonym", + "GI:16130845" + ], + [ + "gene_synonym", + "GeneID:947443" + ], + [ + "gene_synonym", + "JW2911" + ], + [ + "gene_synonym", + "NP_417419.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39902" + ], + [ + "gene_synonym", + "b2944" + ], + [ + "gene_synonym", + "sprT" + ], + [ + "gene_synonym", + "yggI" + ] + ], + "dna_sequence": "ATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCGCGGAACCTCCGCCGGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAATCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAA", + "dna_sequence_length": 498, + "functions": [ + "Zn-dependent metalloprotease-related protein" + ], + "id": "CDS_2899", + "location": [ + [ + "NC_000913", + 3089755, + "+", + 498 + ] + ], + "md5": "fb19916e4d60e1b1bfd84391110c65b4", + "parent_gene": "", + "protein_md5": "bf19bb159bc6957ac8dccfd73e5ec169", + "protein_translation": "MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRGTSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWMMENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGEQLVAK", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009661" + ], + [ + "gene_synonym", + "ECK2940" + ], + [ + "gene_synonym", + "EcoGene:EG11336" + ], + [ + "gene_synonym", + "GI:16130846" + ], + [ + "gene_synonym", + "GeneID:949092" + ], + [ + "gene_synonym", + "JW2912" + ], + [ + "gene_synonym", + "NP_417420.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25736" + ], + [ + "gene_synonym", + "b2945" + ], + [ + "gene_synonym", + "endA" + ] + ], + "dna_sequence": "ATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAACTGGCAGGGCAAAAAAGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCCGCGTAGAGTGGGAACATGTCGTTCCCGCCTGGCAGTTCGGTCACCAGCGCCAGTGCTGGCAGGACGGTGGACGTAAAAACTGCGCTAAAGATCCGGTCTATCGCAAGATGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAA", + "dna_sequence_length": 708, + "functions": [ + "DNA-specific endonuclease I" + ], + "id": "CDS_2900", + "location": [ + [ + "NC_000913", + 3090347, + "+", + 708 + ] + ], + "md5": "f29f874bd913f2e09e712a861134ac6c", + "parent_gene": "", + "protein_md5": "d3f4a81e1ecf0eb29709388199333600", + "protein_translation": "MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKAAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKVQGNHNPYVQRACQARKS", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009665" + ], + [ + "gene_synonym", + "ECK2941" + ], + [ + "gene_synonym", + "EcoGene:EG12366" + ], + [ + "gene_synonym", + "GI:90111515" + ], + [ + "gene_synonym", + "GeneID:945816" + ], + [ + "gene_synonym", + "JW2913" + ], + [ + "gene_synonym", + "NP_417421.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGL7" + ], + [ + "gene_synonym", + "b2946" + ], + [ + "gene_synonym", + "rsmE" + ], + [ + "gene_synonym", + "yggJ" + ] + ], + "dna_sequence": "ATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAGCAAAAAAAGCGTGGAAGTGAAGGTGCTGGAAGGCCAGATCGACGATCGCGAATCTCCGCTGCATATTCACCTCGGTCAGGTGATGTCGCGTGGTGAAAAAATGGAATTTACTATCCAGAAATCGATCGAACTCGGTGTAAGCCTCATTACGCCACTTTTTTCTGAGCGCTGCGGCGTTAAACTGGATAGTGAACGTCTGAACAAGAAGCTTCAGCAGTGGCAGAAGATTGCAATTGCTGCCTGTGAGCAGTGTGGTCGTAACCGGGTGCCGGAAATCCGTCCAGCGATGGATCTGGAAGCCTGGTGTGCAGAGCAGGATGAAGGACTGAAACTGAATCTTCACCCGCGCGCCAGTAACAGCATCAATACGTTGCCGTTACCGGTTGAACGCGTCCGCCTGCTGATTGGCCCGGAAGGCGGTTTATCGGCAGATGAAATTGCCATGACTGCCCGCTATCAATTTACTGATATCCTGTTGGGACCTCGCGTTTTGCGTACAGAGACAACTGCGCTCACCGCCATTACCGCGCTACAAGTACGATTTGGCGATTTGGGCTAA", + "dna_sequence_length": 732, + "functions": [ + "16S rRNA m(3)U1498 methyltransferase, SAM-dependent" + ], + "id": "CDS_2901", + "location": [ + [ + "NC_000913", + 3091134, + "+", + 732 + ] + ], + "md5": "8d238ee87d924f3b12eb0740b7f4b360", + "parent_gene": "", + "protein_md5": "cdd5f9cab8a3311b675752041f458eed", + "protein_translation": "MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFGDLG", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009667" + ], + [ + "gene_synonym", + "ECK2942" + ], + [ + "gene_synonym", + "EcoGene:EG10419" + ], + [ + "gene_synonym", + "GI:16130848" + ], + [ + "gene_synonym", + "GeneID:947445" + ], + [ + "gene_synonym", + "JW2914" + ], + [ + "gene_synonym", + "NP_417422.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04425" + ], + [ + "gene_synonym", + "b2947" + ], + [ + "gene_synonym", + "gsh-II" + ], + [ + "gene_synonym", + "gshB" + ] + ], + "dna_sequence": "ATGATCAAGCTCGGCATCGTGATGGACCCCATCGCAAACATCAACATCAAGAAAGATTCCAGTTTTGCTATGTTGCTGGAAGCACAGCGTCGTGGTTACGAACTTCACTATATGGAGATGGGCGATCTGTATCTGATCAATGGTGAAGCCCGCGCCCATACCCGCACGCTGAACGTGAAGCAGAACTACGAAGAGTGGTTTTCGTTCGTCGGTGAACAGGATCTGCCGCTGGCCGATCTCGATGTGATCCTGATGCGTAAAGACCCGCCGTTTGATACCGAGTTTATCTACGCGACCTATATTCTGGAACGTGCCGAAGAGAAAGGGACGCTGATCGTTAACAAGCCGCAGAGCCTGCGCGACTGTAACGAGAAACTGTTTACCGCCTGGTTCTCTGACTTAACGCCAGAAACGCTGGTTACGCGCAATAAAGCGCAGCTAAAAGCGTTCTGGGAGAAACACAGCGACATCATTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTGTCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAA", + "dna_sequence_length": 951, + "functions": [ + "glutathione synthetase" + ], + "id": "CDS_2902", + "location": [ + [ + "NC_000913", + 3091878, + "+", + 951 + ] + ], + "md5": "e2333371370559863945a1e04ed2bb2d", + "parent_gene": "", + "protein_md5": "b378c0526677f8dce7b53174eed7d879", + "protein_translation": "MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009669" + ], + [ + "gene_synonym", + "ECK2943" + ], + [ + "gene_synonym", + "EcoGene:EG13289" + ], + [ + "gene_synonym", + "GI:90111516" + ], + [ + "gene_synonym", + "GeneID:947442" + ], + [ + "gene_synonym", + "JW2915" + ], + [ + "gene_synonym", + "NP_417423.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8W5" + ], + [ + "gene_synonym", + "b2948" + ], + [ + "gene_synonym", + "yqgE" + ] + ], + "dna_sequence": "ATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACATAATACCAATGGTGCAATGGGGATCATCGTCAACAAGCCGCTGGAAAATCTCAAAATTGAAGGGATTCTGGAAAAGCTGAAGATCACGCCGGAGCCGCGTGATGAATCAATCCGTCTGGATAAACCGGTTATGCTCGGCGGTCCGCTGGCTGAAGATCGCGGGTTTATTTTGCATACTCCGCCCTCCAATTTTGCTTCCAGCATTCGCATTTCAGACAACACGGTAATGACCACTTCCCGCGATGTGCTGGAAACGCTCGGCACCGATAAACAACCGTCTGACGTATTGGTGGCTCTGGGTTATGCCTCCTGGGAGAAAGGTCAACTGGAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCTGGTGTGGCAGGACACGCCTGA", + "dna_sequence_length": 564, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2903", + "location": [ + [ + "NC_000913", + 3092937, + "+", + 564 + ] + ], + "md5": "708ee009f5532d22c64773273ee0f4e3", + "parent_gene": "", + "protein_md5": "fb8570c0e78a414e59aca3a077fd1ffa", + "protein_translation": "MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009672" + ], + [ + "gene_synonym", + "ECK2944" + ], + [ + "gene_synonym", + "EcoGene:EG13290" + ], + [ + "gene_synonym", + "GI:16130850" + ], + [ + "gene_synonym", + "GeneID:947439" + ], + [ + "gene_synonym", + "JW2916" + ], + [ + "gene_synonym", + "NP_417424.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8I1" + ], + [ + "gene_synonym", + "b2949" + ], + [ + "gene_synonym", + "yqgF" + ] + ], + "dna_sequence": "ATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTATTCATGGCCGTTTCGGTGTTGAAGTAAAGCTCCATGACGAGCGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAA", + "dna_sequence_length": 417, + "functions": [ + "putative Holliday junction resolvase" + ], + "id": "CDS_2904", + "location": [ + [ + "NC_000913", + 3093500, + "+", + 417 + ] + ], + "md5": "61f365d10a3f9e63e89cf80c8725319e", + "parent_gene": "", + "protein_md5": "3de6d0f21d64656307f7b3cd91c2ee03", + "protein_translation": "MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009675" + ], + [ + "gene_synonym", + "ECK2945" + ], + [ + "gene_synonym", + "EcoGene:EG12978" + ], + [ + "gene_synonym", + "GI:90111517" + ], + [ + "gene_synonym", + "GeneID:947430" + ], + [ + "gene_synonym", + "JW2917" + ], + [ + "gene_synonym", + "NP_417425.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52052" + ], + [ + "gene_synonym", + "b2950" + ], + [ + "gene_synonym", + "yggR" + ] + ], + "dna_sequence": "ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACGATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATGACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGCAGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGGCGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAATCTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAATATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCGGGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGGCGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCATTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGTGGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGAAAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGGGTGGGGGAAGGGCGTTTGTGA", + "dna_sequence_length": 981, + "functions": [ + "putative PilT family AAA+ ATPase" + ], + "id": "CDS_2905", + "location": [ + [ + "NC_000913", + 3095080, + "-", + 981 + ] + ], + "md5": "7ddc028f4782b3df85f1736fccc05fa8", + "parent_gene": "", + "protein_md5": "7f622f89c96eaf40d792ed8e5e1774a6", + "protein_translation": "MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009681" + ], + [ + "gene_synonym", + "ECK2946" + ], + [ + "gene_synonym", + "EcoGene:EG12979" + ], + [ + "gene_synonym", + "GI:16130852" + ], + [ + "gene_synonym", + "GeneID:947423" + ], + [ + "gene_synonym", + "JW2918" + ], + [ + "gene_synonym", + "NP_417426.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67080" + ], + [ + "gene_synonym", + "b2951" + ], + [ + "gene_synonym", + "yggS" + ] + ], + "dna_sequence": "ATGAACGATATTGCGCATAACCTGGCACAGGTCCGGGACAAAATCTCAGCGGCTGCAACGCGTTGCGGCCGTTCTCCAGAAGAAATTACGCTGCTTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGGTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAGCCGCCTGGTGGCAGAGCATTTCGACTGGTGTCATACCATCGACCGTTTGCGCATCGCTACCCGTCTCAACGACCAGCGCCCGGCAGAACTTCCCCCTCTTAACGTTCTGATTCAAATTAACATTAGTGATGAAAACAGTAAGTCCGGGATTCAACTGGCTGAACTGGACGAGCTGGCAGCTGCGGTCGCTGAACTACCGCGTTTACGTCTGCGCGGGTTGATGGCAATCCCTGCGCCTGAGTCAGAATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTGCCGGACTGAAAACGCGCTACCCGCATATCGACACGCTCTCTCTGGGAATGTCGGACGATATGGAAGCCGCCATTGCGGCAGGTAGCACGATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAA", + "dna_sequence_length": 705, + "functions": [ + "UPF0001 family protein, PLP-binding" + ], + "id": "CDS_2906", + "location": [ + [ + "NC_000913", + 3095098, + "+", + 705 + ] + ], + "md5": "dbaf9f70c6a31d8f262bfbd6d76e3b3a", + "parent_gene": "", + "protein_md5": "2b68a56e970a5df33f6770665e758a03", + "protein_translation": "MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009685" + ], + [ + "gene_synonym", + "ECK2947" + ], + [ + "gene_synonym", + "EcoGene:EG12980" + ], + [ + "gene_synonym", + "GI:16130853" + ], + [ + "gene_synonym", + "GeneID:947421" + ], + [ + "gene_synonym", + "JW2919" + ], + [ + "gene_synonym", + "NP_417427.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64564" + ], + [ + "gene_synonym", + "b2952" + ], + [ + "gene_synonym", + "yggT" + ] + ], + "dna_sequence": "ATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTTTGTAGTGAAGGTAACGCAGCCAATTATCGGGCCACTGCGCCGCGTTATTCCGGCAATGGGGCCAATTGACAGCGCCTCGCTGCTGGTTGCCTATATTCTCAGTTTTATCAAAGCCATCGTGCTGTTTAAAGTGGTGACCTTCCTGCCAATCATCTGGATTGCCGGTTTACTGATTCTGCTGAAAACCATCGGCCTGCTGATTTTCTGGGTCCTGCTGGTGATGGCGATTATGAGCTGGGTAAGCCAGGGGCGTAGCCCGATTGAATACGTGCTGATTCAGCTGGCCGATCCGCTGCTGCGCCCGATTCGCCGCCTGCTACCGGCAATGGGTGGGATTGATTTCTCGCCGATGATCCTCGTTCTGCTGCTGTATGTCATCAATATGGGTGTCGCAGAAGTATTACAGGCAACCGGAAATATGCTGCTGCCAGGGCTGTGGATGGCGTTATGA", + "dna_sequence_length": 567, + "functions": [ + "putative inner membrane protein", + "compensates for loss in K+ uptake" + ], + "id": "CDS_2907", + "location": [ + [ + "NC_000913", + 3095820, + "+", + 567 + ] + ], + "md5": "2ced2c3672b2ce9b3e4bb3f9630cd2ab", + "parent_gene": "", + "protein_md5": "7ad30a2f9c07ad0dff873afcdc2e3d07", + "protein_translation": "MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNMLLPGLWMAL", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009690" + ], + [ + "gene_synonym", + "ECK2948" + ], + [ + "gene_synonym", + "EcoGene:EG12981" + ], + [ + "gene_synonym", + "GI:90111518" + ], + [ + "gene_synonym", + "GeneID:947424" + ], + [ + "gene_synonym", + "JW5479" + ], + [ + "gene_synonym", + "NP_417428.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52060" + ], + [ + "gene_synonym", + "b2953" + ], + [ + "gene_synonym", + "yggU" + ] + ], + "dna_sequence": "ATGAATGCCGTAACAGTTAATGATGACGGTCTGGTTTTACGGCTCTATATTCAGCCGAAAGCCAGCCGTGATTCTATTGTCGGTTTACATGGCGACGAAGTTAAAGTCGCCATTACCGCGCCGCCGGTTGACGGCCAGGCCAACAGTCATCTGGTGAAGTTTCTCGGTAAGCAATTCCGGGTTGCCAAAAGCCAGGTGGTGATTGAAAAAGGCGAACTTGGCCGCCACAAACAAATTAAAATCATTAATCCGCAACAAATCCCGCCAGAAATCGCGGCGTTAATTAATTAG", + "dna_sequence_length": 291, + "functions": [ + "UPF0235 family protein" + ], + "id": "CDS_2908", + "location": [ + [ + "NC_000913", + 3096383, + "+", + 291 + ] + ], + "md5": "ff793b78145983205fa3b4b1bc1c2e01", + "parent_gene": "", + "protein_md5": "9ff14c10435689ced467c34bba27c400", + "protein_translation": "MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009692" + ], + [ + "gene_synonym", + "ECK2949" + ], + [ + "gene_synonym", + "EcoGene:EG12982" + ], + [ + "gene_synonym", + "GI:16130855" + ], + [ + "gene_synonym", + "GeneID:947429" + ], + [ + "gene_synonym", + "JW2921" + ], + [ + "gene_synonym", + "NP_417429.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52061" + ], + [ + "gene_synonym", + "b2954" + ], + [ + "gene_synonym", + "rdgB" + ], + [ + "gene_synonym", + "yggV" + ] + ], + "dna_sequence": "ATGCAAAAAGTTGTCCTCGCAACCGGCAATGTCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACGGTAGCTGGCCGGGCGTGATTACTCGTGAACCAGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTCTTCGTACCTTCCGAAGGGAAAACCGCCGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCGTTGAAACTGCTGCTGGACGCTTTACGTAATGGTTAA", + "dna_sequence_length": 594, + "functions": [ + "dITP/XTP pyrophosphatase" + ], + "id": "CDS_2909", + "location": [ + [ + "NC_000913", + 3096681, + "+", + 594 + ] + ], + "md5": "62196f219be0b6b27d9adb668f49cdea", + "parent_gene": "", + "protein_md5": "b4c571a990cb9c6ffbe9b5d230d61838", + "protein_translation": "MQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009694" + ], + [ + "gene_synonym", + "ECK2950" + ], + [ + "gene_synonym", + "EcoGene:EG12983" + ], + [ + "gene_synonym", + "GI:16130856" + ], + [ + "gene_synonym", + "GeneID:947446" + ], + [ + "gene_synonym", + "JW2922" + ], + [ + "gene_synonym", + "NP_417430.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52062" + ], + [ + "gene_synonym", + "b2955" + ], + [ + "gene_synonym", + "yggW" + ] + ], + "dna_sequence": "ATGGTTAAATTACCTCCGCTGAGTCTCTACATTCACATCCCGTGGTGCGTGCAGAAATGCCCGTACTGCGATTTCAACTCTCACGCGTTGAAAGGAGAAGTGCCGCACGACGATTATGTTCAGCATCTGCTTAACGATCTGGACAACGATGTGGCTTACGCTCAGGGCCGTGAAGTAAAGACAATCTTTATTGGCGGTGGTACGCCGAGCCTGCTTTCCGGCCCGGCGATGCAAACGCTGCTGGACGGCGTGCGTGCGCGTTTGCCGCTGGCAGCGGATGCAGAAATTACTATGGAAGCGAACCCTGGCACGGTAGAAGCCGATCGCTTTGTCGATTATCAGCGTGCTGGTGTGAACCGCATCTCTATTGGTGTGCAGAGTTTTAGCGAAGAAAAGCTGAAACGACTTGGGCGTATTCATGGCCCGCAAGAAGCGAAACGCGCGGCGAAGCTGGCGAGCGGTTTAGGGTTACGTAGCTTTAACCTTGATTTGATGCATGGGCTGCCGGATCAATCACTGGAAGAGGCGCTTGGCGATCTACGCCAGGCCATTGAACTGAATCCGCCGCATCTTTCCTGGTATCAACTGACCATCGAACCCAATACGCTGTTTGGTTCGCGACCACCGGTGCTGCCGGACGATGACGCGTTGTGGGATATATTCGAACAGGGGCATCAGTTATTAACCGCAGCGGGTTATCAGCAATATGAAACTTCCGCTTACGCCAAACCCGGTTATCAGTGCCAGCACAATCTCAACTACTGGCGCTTTGGTGACTACATCGGTATTGGCTGCGGCGCACACGGCAAAGTGACCTTCCCGGATGGGCGCATTCTGCGTACCACCAAAACGCGTCATCCGCGTGGTTTTATGCAAGGAAGGTATCTGGAAAGCCAGCGTGATGTCGAAGCCACAGATAAGCCGTTTGAGTTCTTTATGAATCGCTTCCGTCTGCTGGAGGCCGCGCCGCGCGTGGAGTTTATTGCGTATACCGGGCTTTGCGAAGATGTGATTCGCCCACAGTTAGACGAGGCGATTGCCCAGGGTTATCTCACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAA", + "dna_sequence_length": 1137, + "functions": [ + "HemN family putative oxidoreductase" + ], + "id": "CDS_2910", + "location": [ + [ + "NC_000913", + 3097267, + "+", + 1137 + ] + ], + "md5": "9bcad8c62443a81e4394954912ff8eae", + "parent_gene": "", + "protein_md5": "e23fee3da9bbafbff5236f96fc3ec03e", + "protein_translation": "MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQGRYLESQRDVEATDKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009697" + ], + [ + "gene_synonym", + "ECK2951" + ], + [ + "gene_synonym", + "EcoGene:EG12704" + ], + [ + "gene_synonym", + "GI:16130857" + ], + [ + "gene_synonym", + "GeneID:947455" + ], + [ + "gene_synonym", + "JW2923" + ], + [ + "gene_synonym", + "NP_417431.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46142" + ], + [ + "gene_synonym", + "b2956" + ], + [ + "gene_synonym", + "yggM" + ] + ], + "dna_sequence": "GTGAAAAAGCAATGGATTGTTGGCACGGCACTGCTTATGTTGATGACTGGTAATGCCTGGGCAGATGGCGAACCGCCAACTGAAAATATCTTAAAAGATCAATTCAAAAAGCAGTATCACGGCATTCTCAAGCTTGATGCTATCACCTTAAAAAATCTTGATGCTAAGGGTAATCAGGCCACCTGGTCAGCGGAAGGCGATGTCTCTTCCAGTGACGATCTCTATACCTGGGTCGGTCAGTTGGCAGATTACGAACTGCTCGAACAGACCTGGACGAAAGATAAACCGGTAAAATTCTCGGCGATGTTAACCAGTAAAGGAACGCCCGCGTCTGGCTGGTCGGTGAACTTTTACTCTTTTCAGGCGGCAGCCAGCGATCGTGGGCGGGTGGTCGACGATATCAAAACGAATAATAAATATCTGATCGTGAATAGCGAAGATTTCAATTATCGCTTTAGTCAGCTTGAATCTGCGTTGAATACCCAGAAGAACTCGATTCCTGCGCTGGAAAAGGAAGTGAAAGCGCTTGATAAGCAAATGGTGGCGGCGCAGAAAGCAGCGGATGCATATTGGGGAAAAGATGCAAACGGTAAGCAAATGACCCGCGAAGACGCCTTTAAAAAAATTCACCAACAGCGTGATGAGTTTAATAAACAGAACGATAGCGAGGCGTTCGCGGTTAAATATGACAAAGAGGTTTATCAACCGGCGATTGCGGCATGTCATAAACAGAGTGAAGAGTGTTATGAAGTGCCGATTCAGCAGAAACGAGATTTCGATATCAACGAACAACGGCGACAGACTTTTCTGCAATCACAAAAACTTAGCCGTAAATTGCAGGATGACTGGGTAACGCTCGAAAAAGGGCAATATCCGTTAACGATGAAAGTTTCAGAAATAAACAGTAAAAAAGTCGCGATTTTGATGAAAATTGACGATATCAACCAAGCTAATGAACGCTGGAAAAAAGATACCGAACAACTGCGGCGCAATGGGGTGATTAAGTAA", + "dna_sequence_length": 1008, + "functions": [ + "DUF1202 family putative secreted protein" + ], + "id": "CDS_2911", + "location": [ + [ + "NC_000913", + 3099565, + "-", + 1008 + ] + ], + "md5": "4839bdce59abbea81e36d2459b60681b", + "parent_gene": "", + "protein_md5": "e3f1377c44b80bf76e48142c7ff120f8", + "protein_translation": "MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILKLDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAMLTSKGTPASGWSVNFYSFQAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALNTQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREDAFKKIHQQRDEFNKQNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLSRKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVIK", + "protein_translation_length": 335, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009700" + ], + [ + "gene_synonym", + "ECK2952" + ], + [ + "gene_synonym", + "EcoGene:EG10046" + ], + [ + "gene_synonym", + "GI:16130858" + ], + [ + "gene_synonym", + "GeneID:947454" + ], + [ + "gene_synonym", + "JW2924" + ], + [ + "gene_synonym", + "NP_417432.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00805" + ], + [ + "gene_synonym", + "ansB" + ], + [ + "gene_synonym", + "b2957" + ] + ], + "dna_sequence": "ATGGAGTTTTTCAAAAAGACGGCACTTGCCGCACTGGTTATGGGTTTTAGTGGTGCAGCATTGGCATTACCCAATATCACCATTTTAGCAACCGGCGGGACCATTGCCGGTGGTGGTGACTCCGCAACCAAATCTAACTACACAGTGGGTAAAGTTGGCGTAGAAAATCTGGTTAATGCGGTGCCGCAACTAAAAGACATTGCGAACGTTAAAGGCGAGCAGGTAGTGAATATCGGCTCCCAGGACATGAACGATAATGTCTGGCTGACACTGGCGAAAAAAATTAACACCGACTGCGATAAGACCGACGGCTTCGTCATTACCCACGGTACCGACACGATGGAAGAAACTGCTTACTTCCTCGACCTGACGGTGAAATGCGACAAACCGGTGGTGATGGTCGGCGCAATGCGTCCGTCCACGTCTATGAGCGCAGACGGTCCATTCAACCTGTATAACGCGGTAGTGACCGCAGCTGATAAAGCCTCCGCCAACCGTGGCGTGCTGGTAGTGATGAATGACACCGTGCTTGATGGCCGTGACGTCACCAAAACCAACACCACCGACGTAGCGACCTTCAAGTCTGTTAACTACGGTCCTCTGGGTTACATTCACAACGGTAAGATTGACTACCAGCGTACCCCGGCACGTAAGCATACCAGCGACACGCCATTCGATGTCTCTAAGCTGAATGAACTGCCGAAAGTCGGCATTGTTTATAACTACGCTAACGCATCCGATCTTCCGGCTAAAGCACTGGTAGATGCGGGCTATGATGGCATCGTTAGCGCTGGTGTGGGTAACGGCAACCTGTATAAATCTGTGTTCGACACGCTGGCGACCGCCGCGAAAACCGGTACTGCAGTCGTGCGTTCTTCCCGCGTACCGACGGGCGCTACCACTCAGGATGCCGAAGTGGATGATGCGAAATACGGCTTCGTCGCCTCTGGCACGCTGAACCCGCAAAAAGCGCGCGTTCTGCTGCAACTGGCTCTGACGCAAACCAAAGATCCGCAGCAGATCCAGCAGATCTTCAATCAGTACTAA", + "dna_sequence_length": 1047, + "functions": [ + "periplasmic L-asparaginase 2" + ], + "id": "CDS_2912", + "location": [ + [ + "NC_000913", + 3100728, + "-", + 1047 + ] + ], + "md5": "bc80b754a7c1ac4927c4737273066331", + "parent_gene": "", + "protein_md5": "17d3560c19d38141b1e2c20ba87599ce", + "protein_translation": "MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATKSNYTVGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009706" + ], + [ + "gene_synonym", + "ECK2953" + ], + [ + "gene_synonym", + "EcoGene:EG12705" + ], + [ + "gene_synonym", + "GI:16130859" + ], + [ + "gene_synonym", + "GeneID:947453" + ], + [ + "gene_synonym", + "JW2925" + ], + [ + "gene_synonym", + "NP_417433.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADS9" + ], + [ + "gene_synonym", + "b2958" + ], + [ + "gene_synonym", + "ecfF" + ], + [ + "gene_synonym", + "yggN" + ] + ], + "dna_sequence": "ATGATGCGCAAAATGCTGCTGGCGGCAGCACTTTCAGTGACGGCAATGACCGCTCACGCCGACTACCAGTGCAGCGTCACGCCGCGTGACGATGTGATTGTCAGCCCGCAAACCGTGCAGGTGAAGGGCGAAAACGGCAATCTGGTGATCACGCCAGACGGCAACGTGATGTATAACGGTAAGCAATATTCCCTGAATGCCGCCCAGCGCGAGCAGGCGAAGGATTATCAGGCTGAACTACGCAGCACGCTGCCGTGGATTGATGAAGGCGCGAAAAGCCGCGTCGAGAAAGCCCGTATTGCTCTGGATAAAATTATCGTTCAGGAGATGGGCGAAAGCAGCAAAATGCGCAGCCGTCTGACCAAACTTGATGCGCAGCTGAAAGAGCAGATGAACCGCATTATTGAAACGCGCAGCGATGGCCTGACGTTTCACTATAAAGCCATTGATCAGGTTCGCGCCGAAGGCCAGCAATTAGTGAATCAGGCAATGGGTGGAATTTTACAGGACAGCATTAATGAAATGGGCGCGAAAGCGGTGCTGAAAAGCGGCGGTAACCCATTACAGAATGTGCTGGGAAGCCTGGGGGGGCTGCAATCCTCAATCCAAACCGAGTGGAAAAAGCAGGAAAAAGATTTCCAGCAGTTTGGCAAAGATGTTTGTAGCCGCGTTGTGACTCTGGAAGATAGCCGCAAAGCCCTGGTCGGGAATTTAAAATAA", + "dna_sequence_length": 720, + "functions": [ + "DUF2884 family putative periplasmic protein" + ], + "id": "CDS_2913", + "location": [ + [ + "NC_000913", + 3101623, + "-", + 720 + ] + ], + "md5": "004690854f2b5248d69787f8c33aceaf", + "parent_gene": "", + "protein_md5": "1ec15bf8020179e500e9c92c944b4e14", + "protein_translation": "MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009712" + ], + [ + "gene_synonym", + "ECK2954" + ], + [ + "gene_synonym", + "EcoGene:EG12443" + ], + [ + "gene_synonym", + "GI:90111519" + ], + [ + "gene_synonym", + "GeneID:947449" + ], + [ + "gene_synonym", + "JW2926" + ], + [ + "gene_synonym", + "NP_417434.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38521" + ], + [ + "gene_synonym", + "b2959" + ], + [ + "gene_synonym", + "yggL" + ] + ], + "dna_sequence": "ATGGCAAAGAACCGTAGCCGTCGTCTGCGTAAAAAAATGCACATCGACGAATTCCAGGAATTAGGATTTTCGGTGGCATGGCGATTCCCGGAAGGTACATCGGAAGAACAGATTGATAAAACCGTTGATGATTTTATTAACGAGGTTATCGAACCGAACAAACTGGCCTTTGACGGCAGCGGTTATCTGGCCTGGGAAGGTCTGATCTGCATGCAGGAAATCGGCAAATGCACCGAAGAACATCAGGCGATTGTGCGTAAGTGGCTGGAAGAGCGCAAACTGGATGAGGTACGCACCAGCGAACTTTTCGACGTTTGGTGGGACTAA", + "dna_sequence_length": 327, + "functions": [ + "DUF469 family protein" + ], + "id": "CDS_2914", + "location": [ + [ + "NC_000913", + 3102133, + "-", + 327 + ] + ], + "md5": "658d83375c434dc0196dad12bc041122", + "parent_gene": "", + "protein_md5": "d7dbb589369144842b0aeadbbe674330", + "protein_translation": "MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009714" + ], + [ + "gene_synonym", + "ECK2955" + ], + [ + "gene_synonym", + "EcoGene:EG11779" + ], + [ + "gene_synonym", + "GI:16130861" + ], + [ + "gene_synonym", + "GeneID:947448" + ], + [ + "gene_synonym", + "JW2927" + ], + [ + "gene_synonym", + "NP_417435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8I5" + ], + [ + "gene_synonym", + "b2960" + ], + [ + "gene_synonym", + "trmB?" + ], + [ + "gene_synonym", + "trmI" + ], + [ + "gene_synonym", + "yggH" + ] + ], + "dna_sequence": "ATGAAAAACGACGTCATTTCACCGGAATTTGATGAAAACGGCCGCCCACTGCGCCGTATCCGTAGTTTTGTGCGCCGCCAGGGGCGACTGACCAAAGGCCAGGAACATGCGCTGGAAAACTACTGGCCGGTGATGGGCGTTGAGTTCAGCGAAGATATGCTGGATTTCCCCGCGCTTTTTGGCCGTGAAGCGCCGGTGACGCTTGAGATTGGTTTTGGCATGGGGGCGTCGCTGGTGGCAATGGCTAAAGATCGCCCTGAGCAGGACTTCCTCGGCATTGAAGTGCATTCACCGGGCGTTGGTGCGTGCCTGGCTTCTGCGCATGAAGAAGGTTTAAGCAACCTGCGCGTGATGTGTCACGATGCGGTTGAAGTGCTGCATAAAATGATTCCTGACAATTCATTGCGCATGGTGCAGCTCTTTTTCCCTGACCCGTGGCACAAAGCGCGCCATAATAAACGCCGTATCGTTCAGGTGCCGTTTGCCGAACTGGTAAAAAGCAAACTGCAGCTGGGGGGCGTATTCCATATGGCGACCGACTGGGAACCTTATGCGGAACATATGCTTGAAGTGATGTCTTCTATTGACGGTTATAAAAACCTGTCAGAGAGCAATGATTACGTACCGCGTCCGGCATCACGTCCGGTGACGAAATTTGAACAACGTGGTCATCGTCTTGGTCACGGAGTATGGGACTTAATGTTCGAGAGGGTGAAATAA", + "dna_sequence_length": 720, + "functions": [ + "tRNA m(7)G46 methyltransferase, SAM-dependent" + ], + "id": "CDS_2915", + "location": [ + [ + "NC_000913", + 3102852, + "-", + 720 + ] + ], + "md5": "a7b4487e1108177c0da61342f6fdfa3d", + "parent_gene": "", + "protein_md5": "942656c075cbe0d7989ebcf0cc018006", + "protein_translation": "MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009720" + ], + [ + "gene_synonym", + "ECK2956" + ], + [ + "gene_synonym", + "EcoGene:EG10627" + ], + [ + "gene_synonym", + "GI:16130862" + ], + [ + "gene_synonym", + "GeneID:947447" + ], + [ + "gene_synonym", + "JW2928" + ], + [ + "gene_synonym", + "NP_417436.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17802" + ], + [ + "gene_synonym", + "b2961" + ], + [ + "gene_synonym", + "micA" + ], + [ + "gene_synonym", + "mutB" + ], + [ + "gene_synonym", + "mutY" + ] + ], + "dna_sequence": "ATGCAAGCGTCGCAATTTTCAGCCCAGGTTCTGGACTGGTACGATAAATACGGGCGAAAAACTCTGCCCTGGCAAATTGACAAGACGCCCTACAAAGTATGGCTCTCAGAAGTGATGTTGCAACAAACTCAGGTTGCGACCGTTATCCCCTATTTTGAACGCTTTATGGCGCGCTTCCCGACGGTGACCGATCTCGCCAATGCGCCGCTCGACGAAGTTCTCCACTTGTGGACCGGGCTTGGCTATTACGCCCGCGCGCGCAATCTGCATAAAGCGGCACAACAAGTGGCGACCTTACACGGCGGTAAATTCCCGGAAACCTTTGAGGAAGTTGCAGCACTGCCGGGCGTCGGGCGTTCCACCGCAGGCGCGATTCTCTCGCTTTCTCTGGGTAAGCACTTTCCGATTCTCGACGGTAACGTCAAACGCGTGCTGGCGCGCTGCTATGCTGTAAGCGGCTGGCCTGGGAAAAAAGAGGTCGAGAATAAATTATGGAGTTTGAGCGAGCAGGTGACGCCCGCGGTTGGCGTGGAACGGTTTAATCAGGCGATGATGGATTTGGGTGCGATGATTTGTACGCGCTCGAAACCGAAATGTTCGCTCTGTCCGCTACAAAACGGATGTATTGCCGCCGCCAACAATAGCTGGGCGCTTTATCCGGGCAAAAAACCGAAACAGACGCTGCCGGAGCGCACCGGCTACTTTTTGCTATTACAGCACGAAGATGAAGTATTGCTGGCGCAGCGTCCGCCGAGCGGATTGTGGGGCGGTTTATACTGTTTCCCGCAGTTTGCCGACGAAGAAAGTTTGCGGCAGTGGCTGGCGCAACGGCAGATTGCTGCCGATAACCTGACGCAACTGACCGCGTTTCGGCATACCTTCAGCCATTTCCACTTAGATATTGTGCCTATGTGGCTTCCCGTGTCGTCATTCACCGGCTGCATGGATGAAGGCAATGCGCTCTGGTATAACTTAGCGCAACCGCCGTCAGTTGGCCTAGCGGCTCCCGTGGAGCGTTTGTTACAGCAGTTACGCACTGGCGCGCCGGTTTAG", + "dna_sequence_length": 1053, + "functions": [ + "adenine DNA glycosylase" + ], + "id": "CDS_2916", + "location": [ + [ + "NC_000913", + 3103013, + "+", + 1053 + ] + ], + "md5": "5e3c995f6e0cc4cb325d7f69dc029673", + "parent_gene": "", + "protein_md5": "14cfebc4e74a61eff5be958fc20838ea", + "protein_translation": "MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009722" + ], + [ + "gene_synonym", + "ECK2957" + ], + [ + "gene_synonym", + "EcoGene:EG12984" + ], + [ + "gene_synonym", + "GI:16130863" + ], + [ + "gene_synonym", + "GeneID:947461" + ], + [ + "gene_synonym", + "JW2929" + ], + [ + "gene_synonym", + "NP_417437.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8P3" + ], + [ + "gene_synonym", + "b2962" + ], + [ + "gene_synonym", + "yggX" + ] + ], + "dna_sequence": "ATGAGCAGAACGATTTTTTGTACTTTCCTGCAACGTGAAGCAGAAGGTCAGGATTTTCAGCTGTACCCCGGCGAGCTGGGAAAACGCATCTATAACGAGATCTCCAAAGAAGCCTGGGCGCAGTGGCAGCACAAGCAAACCATGCTGATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAA", + "dna_sequence_length": 276, + "functions": [ + "oxidative damage protective factor for iron-sulfur proteins" + ], + "id": "CDS_2917", + "location": [ + [ + "NC_000913", + 3104093, + "+", + 276 + ] + ], + "md5": "16ba63eff94035c54fb2879dfdba1f59", + "parent_gene": "", + "protein_md5": "d3e155df63b4b26d95a6a761b36e6453", + "protein_translation": "MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009725" + ], + [ + "gene_synonym", + "ECK2958" + ], + [ + "gene_synonym", + "EcoGene:EG12986" + ], + [ + "gene_synonym", + "GI:90111520" + ], + [ + "gene_synonym", + "GeneID:945428" + ], + [ + "gene_synonym", + "JW5481" + ], + [ + "gene_synonym", + "NP_417438.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C066" + ], + [ + "gene_synonym", + "b2963" + ], + [ + "gene_synonym", + "mltC" + ], + [ + "gene_synonym", + "yggZ" + ] + ], + "dna_sequence": "ATGAAAAAATATCTCGCGCTGGCTTTGATTGCGCCGTTGCTCATCTCCTGTTCGACGACCAAAAAAGGCGATACCTATAACGAAGCCTGGGTCAAAGATACCAACGGTTTTGATATTCTGATGGGGCAATTTGCCCACAATATTGAGAACATCTGGGGCTTCAAAGAGGTGGTGATCGCTGGTCCTAAGGACTACGTGAAATACACCGATCAATATCAGACCCGCAGCCACATCAACTTCGATGACGGTACGATTACTATCGAAACCATCGCCGGGACAGAACCTGCCGCGCATTTGCGCCGGGCAATTATCAAAACGTTATTGATGGGTGACGATCCGAGTTCGGTCGATCTCTATTCCGACGTTGATGATATTACGATTTCGAAAGAACCTTTCCTTTACGGTCAGGTGGTGGACAACACCGGGCAGCCGATTCGCTGGGAAGGTCGCGCAAGCAACTTCGCGGATTATCTGCTGAAAAACCGTCTGAAGAGCCGCAGCAACGGGCTGCGTATCATCTACAGCGTCACCATTAACATGGTGCCGAACCACCTTGATAAACGTGCGCACAAATATCTCGGCATGGTCCGCCAGGCGTCACGGAAATATGGCGTTGATGAGTCGCTGATTCTGGCAATTATGCAGACCGAATCTTCCTTTAACCCGTATGCGGTCAGCCGTTCCGATGCGCTGGGATTAATGCAGGTGGTACAACATACTGCCGGGAAAGATGTGTTCCGCTCGCAGGGGAAATCCGGCACGCCGAGCCGCAGTTTCTTGTTTGATCCTGCCAGCAATATTGATACCGGCACCGCGTATCTGGCGATGCTGAACAATGTTTATCTCGGCGGAATTGATAACCCAACATCGCGGCGTTATGCCGTCATCACCGCCTATAACGGCGGCGCAGGCAGCGTGCTGCGAGTCTTTTCGAATGATAAGATTCAGGCTGCCAATATTATTAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAA", + "dna_sequence_length": 1080, + "functions": [ + "membrane-bound lytic murein transglycosylase C" + ], + "id": "CDS_2918", + "location": [ + [ + "NC_000913", + 3104433, + "+", + 1080 + ] + ], + "md5": "8c19b625661855ba8d58b959e234b67f", + "parent_gene": "", + "protein_md5": "ee31cf06d57de054e16dddc079d38ce5", + "protein_translation": "MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009728" + ], + [ + "gene_synonym", + "ECK2959" + ], + [ + "gene_synonym", + "EcoGene:EG10664" + ], + [ + "gene_synonym", + "GI:90111521" + ], + [ + "gene_synonym", + "GeneID:946282" + ], + [ + "gene_synonym", + "JW2932" + ], + [ + "gene_synonym", + "NP_417439.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF4" + ], + [ + "gene_synonym", + "b2964" + ], + [ + "gene_synonym", + "nupG" + ] + ], + "dna_sequence": "ATGAATCTTAAGCTGCAGCTGAAAATCCTCTCTTTTCTGCAGTTCTGTCTGTGGGGAAGTTGGCTGACGACCCTCGGCTCCTATATGTTTGTTACCCTGAAGTTTGACGGTGCTTCTATTGGCGCAGTTTATAGCTCACTGGGTATCGCAGCGGTCTTTATGCCTGCGCTGCTGGGGATTGTGGCCGACAAATGGTTAAGTGCGAAATGGGTATATGCCATTTGCCACACCATTGGCGCTATCACGCTGTTCATGGCGGCACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAGCAAGCGAATCAGAGCTGGACAACCCTGCTGGGCCTCGATGCATTCGCGCTGTTTAAAAACAAGCGTATGGCAATCTTCTTTATCTTCTCAATGCTGCTGGGCGCGGAACTGCAGATTACCAACATGTTCGGTAATACCTTCCTGCACAGCTTCGACAAAGATCCGATGTTTGCCAGCAGCTTTATTGTGCAGCATGCGTCAATCATCATGTCGATTTCGCAGATCTCTGAAACCCTGTTCATTCTGACCATCCCGTTCTTCTTAAGCCGCTACGGTATTAAGAACGTAATGATGATCAGTATTGTGGCGTGGATCCTGCGTTTTGCGCTGTTTGCTTACGGCGACCCGACTCCGTTCGGTACTGTACTGCTGGTACTGTCGATGATCGTTTACGGTTGCGCATTCGACTTCTTCAACATCTCTGGTTCGGTGTTTGTCGAAAAAGAAGTTAGCCCGGCAATTCGCGCCAGTGCACAAGGGATGTTCCTGATGATGACTAACGGCTTCGGCTGTATCCTCGGCGGCATCGTGAGCGGTAAAGTTGTTGAGATGTACACCCAAAACGGCATTACCGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAA", + "dna_sequence_length": 1257, + "functions": [ + "nucleoside transporter" + ], + "id": "CDS_2919", + "location": [ + [ + "NC_000913", + 3105714, + "+", + 1257 + ] + ], + "md5": "b7c5179fa3a3a80e6baf32f606e2a767", + "parent_gene": "", + "protein_md5": "596aef6d25e5897f6b32df41ac1b0f1c", + "protein_translation": "MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILINSFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVSH", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009730" + ], + [ + "gene_synonym", + "ECK2960" + ], + [ + "gene_synonym", + "EcoGene:EG10961" + ], + [ + "gene_synonym", + "GI:90111522" + ], + [ + "gene_synonym", + "GeneID:947457" + ], + [ + "gene_synonym", + "JW5482" + ], + [ + "gene_synonym", + "NP_417440.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21169" + ], + [ + "gene_synonym", + "b2965" + ], + [ + "gene_synonym", + "speC" + ] + ], + "dna_sequence": "ATGAAATCAATGAATATTGCCGCCAGTAGTGAACTGGTATCCCGACTTTCTTCTCATCGTCGCGTGGTGGCGTTGGGAGATACTGATTTTACGGACGTCGCGGCAGTCGTCATTACCGCTGCGGATAGTCGCAGTGGCATTCTTGCGTTGCTTAAGCGCACCGGTTTTCATCTACCGGTGTTTTTGTATTCCGAACATGCTGTTGAATTACCTGCGGGCGTTACGGCGGTAATCAACGGCAACGAGCAGCAGTGGCTGGAGCTGGAATCCGCAGCCTGTCAGTATGAAGAGAATTTGCTGCCACCGTTTTATGACACGCTGACGCAGTACGTTGAGATGGGCAACAGCACCTTTGCTTGCCCTGGACATCAACATGGTGCGTTTTTTAAAAAGCATCCTGCCGGACGCCATTTTTACGATTTCTTTGGTGAGAACGTCTTTCGCGCCGATATGTGTAACGCTGACGTAAAATTGGGCGATCTGCTTATTCATGAAGGATCGGCGAAAGATGCGCAGAAATTCGCAGCCAAAGTCTTTCATGCCGATAAAACCTATTTTGTGCTGAACGGCACATCGGCAGCGAATAAAGTGGTGACGAATGCGCTGTTAACGCGTGGCGATCTGGTGCTCTTCGACCGTAACAACCATAAGTCGAATCATCACGGCGCGCTGATTCAGGCGGGGGCGACGCCGGTCTATCTGGAAGCTTCACGCAACCCGTTTGGTTTCATTGGCGGTATTGATGCGCACTGTTTTAATGAAGAGTATCTGCGCCAGCAAATTCGCGACGTTGCGCCAGAAAAAGCCGACCTGCCGCGCCCGTATCGCCTGGCGATTATTCAGCTGGGAACCTATGACGGCACTGTCTATAACGCCCGTCAGGTGATCGATACCGTTGGGCATCTGTGTGATTACATTCTGTTTGATTCCGCGTGGGTCGGTTATGAACAATTTATCCCGATGATGGCGGATAGCTCGCCGCTGCTGTTAGAACTTAACGAAAACGATCCGGGGATCTTTGTGACTCAGTCGGTGCACAAACAGCAGGCGGGATTCTCACAGACGTCGCAGATCCATAAAAAAGATAACCATATCCGCGGACAGGCGCGTTTTTGCCCGCATAAGCGGTTGAATAACGCCTTTATGCTCCATGCTTCTACCAGCCCTTTCTATCCGCTGTTTGCTGCACTGGATGTTAACGCCAAAATTCATGAAGGGGAGAGTGGGCGTCGGCTGTGGGCTGAGTGTGTTGAGATAGGGATTGAAGCGCGCAAGGCTATTCTTGCGCGCTGTAAGCTGTTCCGCCCGTTTATCCCGCCCGTTGTTGATGGCAAATTGTGGCAGGATTATCCGACATCAGTGTTAGCCAGCGACCGCCGTTTTTTCAGTTTTGAGCCGGGGGCGAAGTGGCACGGCTTTGAAGGATATGCCGCGGATCAGTATTTTGTTGATCCGTGCAAGCTGTTACTCACTACACCAGGTATCGATGCCGAAACCGGCGAATATAGCGACTTTGGCGTTCCGGCGACGATTCTGGCGCACTATCTGCGTGAGAACGGCATTGTGCCGGAGAAGTGCGATCTCAACTCCATTCTGTTTTTATTAACTCCGGCGGAAAGCCACGAGAAGCTGGCACAACTGGTGGCGATGCTGGCGCAATTTGAACAGCATATTGAGGATGACTCGCCGCTGGTTGAGGTGTTGCCGAGCGTTTATAACAAGTATCCGGTGCGCTATCGCGACTACACCCTGCGCCAGTTGTGTCAGGAGATGCACGATCTGTATGTCAGTTTCGACGTCAAAGACCTACAAAAAGCGATGTTCCGCCAGCAGAGTTTCCCGTCAGTGGTGATGAACCCCCAGGATGCGCATAGCGCTTATATTCGCGGTGACGTGGAGTTGGTGCGGATTCGTGATGCCGAAGGGCGAATTGCGGCAGAAGGGGCGTTGCCTTATCCACCTGGCGTGCTTTGCGTGGTACCCGGGGAAGTCTGGGGTGGGGCGGTTCAACGTTATTTCCTTGCACTGGAAGAAGGGGTGAATTTGTTGCCGGGATTTTCGCCGGAGCTGCAAGGTGTTTATAGCGAAACCGATGCGGATGGCGTGAAACGGTTGTACGGTTATGTGTTGAAGTAA", + "dna_sequence_length": 2136, + "functions": [ + "ornithine decarboxylase, constitutive" + ], + "id": "CDS_2920", + "location": [ + [ + "NC_000913", + 3109155, + "-", + 2136 + ] + ], + "md5": "049330e4b1458a501c4e9d1142a507a8", + "parent_gene": "", + "protein_md5": "4c3c9bde8fba148164fb4d42b1a6ec30", + "protein_translation": "MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLVEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAHSAYIRGDVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGVKRLYGYVLK", + "protein_translation_length": 711, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009736" + ], + [ + "gene_synonym", + "ECK2961" + ], + [ + "gene_synonym", + "EcoGene:EG12987" + ], + [ + "gene_synonym", + "GI:16130867" + ], + [ + "gene_synonym", + "GeneID:947462" + ], + [ + "gene_synonym", + "JW2934" + ], + [ + "gene_synonym", + "NP_417441.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46831" + ], + [ + "gene_synonym", + "b2966" + ], + [ + "gene_synonym", + "yqgA" + ] + ], + "dna_sequence": "GTGGTCATCGGCCCTTTTATCAACGCTAGTGCAGTCTTACTGGGTGGCGTTCTCGGCGCACTGCTCAGCCAACGCTTACCGGAACGTATCCGCGTCTCCATGACATCAATTTTTGGTCTGGCATCGCTGGGGATTGGTATTTTACTGGTGGTGAAATGTGCCAACCTTCCAGCGATGGTTTTAGCTACGCTACTTGGCGCTCTAATTGGCGAAATTTGTTTGCTGGAGAAAGGTGTCAATACAGCAGTCGCCAAAGCACAAAATCTGTTTCGTCACTCACGTAAGAAGCCAGCGCATGAATCTTTTATTCAGAATTATGTCGCGATTATTGTCCTGTTTTGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAATCGCCAAGTCATTTCTTGATTTCTTTACGGCGATGATCTTCGCCTGCTCGCTGGGTATTGCGGTATCGGTGATTAGTATCCCATTACTGATCATCCAGTTAACGCTGGCGTGGGCTGCCGCGCTGATTTTACCGCTGACCACACCGTCGATGATGGCAGACTTCAGCGCCGTAGGCGGTTTATTGCTGCTGGCAACCGGATTACGCATCTGTGGCATTAAAATGTTCCCGGTGGTCAACATGCTTCCAGCACTCCTTCTGGCAATGCCGCTTTCCGCCGCCTGGACCGCCTGGTTTGCCTGA", + "dna_sequence_length": 708, + "functions": [ + "DUF554 family putative inner membrane protein" + ], + "id": "CDS_2921", + "location": [ + [ + "NC_000913", + 3109553, + "+", + 708 + ] + ], + "md5": "36b20423ed3dcf2bf66fc1f6cca4b345", + "parent_gene": "", + "protein_md5": "aea48882ad085b583abe5e858ddf4af9", + "protein_translation": "MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVISIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009740" + ], + [ + "gene_synonym", + "ECK2963" + ], + [ + "gene_synonym", + "EcoGene:EG12988" + ], + [ + "gene_synonym", + "GI:16130868" + ], + [ + "gene_synonym", + "GeneID:947025" + ], + [ + "gene_synonym", + "JW2935" + ], + [ + "gene_synonym", + "NP_417442.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46832" + ], + [ + "gene_synonym", + "b2968" + ], + [ + "gene_synonym", + "ecfC" + ], + [ + "gene_synonym", + "gspMbeta" + ], + [ + "gene_synonym", + "yghD" + ] + ], + "dna_sequence": "ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACAACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACGTCCTCATCTGGCAGCCGTTGAGCGAACGGATTGAGCAACAGGAGACAATATTGCAGCAGCTGGTGGCGATGAACACCCGACTGAAGAACGCCGCGCCGGATATTATTGCAGCGCGAAAATCTGCCACAACAACGCCTGCGCAGGTATCGCGGGTCATCAGTGACAGTGCTTCCGCGCACTCGGTGGTCATCAGGCGGATAGCCGATCGTGGGGAGAATATTCAGGTCTGGATAGAACCTGTGGTGTTTAATGACCTGCTGAAATGGTTAAACGCACTGGATGAAAAATATGCGCTGCGGGTGACACAAATTGATGTCAGTGCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA", + "dna_sequence_length": 537, + "functions": [ + "putative membrane-anchored secretion pathway M-type protein" + ], + "id": "CDS_2922", + "location": [ + [ + "NC_000913", + 3111126, + "-", + 537 + ] + ], + "md5": "978f5b02d09abbc9148d8093d8816c30", + "parent_gene": "", + "protein_md5": "f0c181abf863ce639abb61b92fa14a8b", + "protein_translation": "MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETILQQLVAMNTRLKNAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIRRIADRGENIQVWIEPVVFNDLLKWLNALDEKYALRVTQIDVSAAEKPGMVNVQRLEFGRG", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009742" + ], + [ + "gene_synonym", + "ECK2964" + ], + [ + "gene_synonym", + "EcoGene:EG12989" + ], + [ + "gene_synonym", + "GeneID:945897" + ], + [ + "gene_synonym", + "JW5924" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46833" + ], + [ + "gene_synonym", + "b2969" + ], + [ + "gene_synonym", + "ecfB" + ], + [ + "gene_synonym", + "gspLbeta" + ], + [ + "gene_synonym", + "yghE" + ] + ], + "dna_sequence": "CCGACTATTCTGCCCGCCTTACTGGAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAATATCGACCAGCAACTGGCAACCGTAGCAGTGATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACTGGATGTCCATTCCTTGTGGGTTTATGGCTTGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGCGCCGGGCTGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGGCATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCATTACCACTTATGGCGAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGGCGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGAACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTACGCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATAGCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTTACCTTTGATCAAAAACGCCAGATACTTCACCTCCAGCTACGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGTACTGGCAACCGATTATGTTGTGCAACAGGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA", + "dna_sequence_length": 963, + "id": "CDS_2923", + "location": [ + [ + "NC_000913", + 3112090, + "-", + 963 + ] + ], + "md5": "0ee85fa70bd0dc58cd470f9880b05134", + "parent_gene": "", + "protein_md5": "aba7236247a326d462ab8fb45fd34801", + "protein_translation": "PTILPALLEEELNQDIDELHFAPLNIDQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009745" + ], + [ + "gene_synonym", + "ECK2965" + ], + [ + "gene_synonym", + "EcoGene:EG12990" + ], + [ + "gene_synonym", + "GeneID:947469" + ], + [ + "gene_synonym", + "JW5484" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46834" + ], + [ + "gene_synonym", + "b2970" + ], + [ + "gene_synonym", + "ecfA" + ], + [ + "gene_synonym", + "gspCbeta" + ], + [ + "gene_synonym", + "yghF" + ] + ], + "dna_sequence": "CTGCGAAAAATTGCACGCGGGATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAATGGCGCATTCACTCTGGCGCTATATCTCCTTTTCTGCGGAATATACGGCGGTTTCTCAACCGGTGAATAAACCGAGCCGTGTGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACTGGTTTGGCAAATATCAGCCTGTCGCCGCGCAGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACGCGTCTTAATGTGGTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGTCTATTTGCAGGGTGAAACGCTTGGCTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGTTATCAGGGAAAAATAGAGCGTCTGAGTCTGGCAGAAGAGGAACGTTCCACTGTTGCTGTGACCAACAAAAAAGCCGTCAGTGACGAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGTCAGTGTGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGCGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCCACGACATTTCCATCGCGCTGCGC", + "dna_sequence_length": 849, + "id": "CDS_2924", + "location": [ + [ + "NC_000913", + 3112941, + "-", + 849 + ] + ], + "md5": "35385842a38f3e48ab2fb1812bd910e3", + "parent_gene": "", + "protein_md5": "729cc976c16e12423c0846046ce1b533", + "protein_translation": "LRKIARGMFWLMLLIISAKMAHSLWRYISFSAEYTAVSQPVNKPSRVDAKTFDKNDVQLISQQNWFGKYQPVAAQVKQPEPVPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009748" + ], + [ + "gene_synonym", + "ECK2966" + ], + [ + "gene_synonym", + "EcoGene:EG12991" + ], + [ + "gene_synonym", + "GI:16130871" + ], + [ + "gene_synonym", + "GeneID:947470" + ], + [ + "gene_synonym", + "JW2938" + ], + [ + "gene_synonym", + "NP_417445.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46835" + ], + [ + "gene_synonym", + "b2971" + ], + [ + "gene_synonym", + "gspSbeta" + ], + [ + "gene_synonym", + "yghG" + ] + ], + "dna_sequence": "ATGTCGATAAAACAAATGCCAGGGAGGGTATTAATATCGCTATTGTTGAGCGTTACAGGATTATTAAGTGGCTGTGCCAGCCATAATGAAAATGCCAGTTTACTGGCGAAAAAACAGGCGCAAAATATCAGCCAAAACCTGCCGATTAAATCTGCGGGATATACCTTAGTGCTGGCGCAAAGTAGCGGCACAACGGTAAAAATGACCATTATCAGCGAAGCGGGTACACAAACCACGCAGACGCCTGACGCCTTTTTAACCAGCTATCAACGACAAATGTGCGCTGACCCGACGGTGAAATTAATGATCACTGAGGGAATTAATTACAGCATAACGATTAATGATACACGTACAGGTAACCAGTATCAGCGGAAACTGGATCGTACCACCTGTGGAATAGTCAAAGCATAA", + "dna_sequence_length": 411, + "functions": [ + "secretin (GspDbeta) OM localization lipoprotein pilotin" + ], + "id": "CDS_2925", + "location": [ + [ + "NC_000913", + 3113477, + "-", + 411 + ] + ], + "md5": "aceff67f9d81402a5e9814bfda4941ec", + "parent_gene": "", + "protein_md5": "784466b225deb9637506eebf4ec17ac6", + "protein_translation": "MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009751" + ], + [ + "gene_synonym", + "ECK2967" + ], + [ + "gene_synonym", + "EcoGene:EG12992" + ], + [ + "gene_synonym", + "GI:90111523" + ], + [ + "gene_synonym", + "GeneID:947467" + ], + [ + "gene_synonym", + "JW2939" + ], + [ + "gene_synonym", + "NP_417446.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46836" + ], + [ + "gene_synonym", + "b2972" + ], + [ + "gene_synonym", + "pppA" + ], + [ + "gene_synonym", + "yghH" + ] + ], + "dna_sequence": "ATGCTTTTTGATGTTTTTCAGCAATACCCCACGGCGATGCCCGTCCTGGCAACCGTCGGAGGATTGATCATCGGCAGTTTTTTGAATGTGGTGATTTGGCGTTACCCAATCATGCTGCGCCAACAAATGGCGGAGTTTCACGGTGAAATGTCGAGTGCGCAGTCAAAAATAAGCCTTGCGCTACCGCGTTCGCACTGCCCACATTGTCAGCAGACCATCCGGATACGTGACAATATTCCGCTGTTCTCCTGGCTGATGCTCAAAGGGCGCTGCCGCGACTGTCAGGCGAAAATCAGCAAGCGTTATCCGCTGGTGGAGTTATTGACAGCACTTGCTTTTTTGCTGGCGAGTCTGGTCTGGCCAGAAAGTGGATGGGGGCTGGCGGTGATGATATTATCCGCCTGGCTGATTGCCGCGAGTGTCATCGACCTCGATCACCAATGGCTGCCCGATGTTTTTACTCAGGGCGTATTGTGGACAGGACTGATTGCGGCATGGGCGCAGCAGAGTCCGCTCACGCTACAAGATGCAGTCACCGGCGTCCTGGTGGGATTTATCACTTTTTACTCTCTGCGTTGGATAGCCGGAATAGTTCTGCGTAAAGAAGCATTAGGCATGGGCGATGTATTACTTTTCGCCGCGTTAGGTGGCTGGGTGGGGGCATTGTCGCTGCCCAATGTTGCTTTAATCGCCTCATGCTGCGGCCTGATATATGCCGTTATTACAAAAAGAGGATCAACCACACTGCCTTTTGGACCGTGTTTAAGTCTGGGCGGTATAGCAACACTTTATCTACAGGCATTGTTTTAA", + "dna_sequence_length": 810, + "functions": [ + "bifunctional prepilin leader peptidase/ methylase" + ], + "id": "CDS_2926", + "location": [ + [ + "NC_000913", + 3114352, + "-", + 810 + ] + ], + "md5": "388dcdca2da6522fd938f402257ddc0a", + "parent_gene": "", + "protein_md5": "f3e594435d0217a3baca64cbe89537e0", + "protein_translation": "MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174096" + ], + [ + "gene_synonym", + "ECK2968" + ], + [ + "gene_synonym", + "EcoGene:EG12994" + ], + [ + "gene_synonym", + "GI:49176293" + ], + [ + "gene_synonym", + "GeneID:2847716" + ], + [ + "gene_synonym", + "JW5925" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CK95" + ], + [ + "gene_synonym", + "YP_026189.1" + ], + [ + "gene_synonym", + "acfD" + ], + [ + "gene_synonym", + "b4466" + ], + [ + "gene_synonym", + "sslE" + ], + [ + "gene_synonym", + "yghJ" + ] + ], + "dna_sequence": "ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGGTGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAGCCTACGCCAGAACCGATACCTGATCCTGAACCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTGTAATGGTGAATCCAGCGATGGCTTTACATTTAAACCTGGCGAGGACGTTACTTGCGTGGCGGGTAACACGACAATTGCCACCTTCAACACTCAGTCAGAAGCTGCGCGTAGCTTGCGTGCGGTTGAAAAAGTGTCGTTTAGCCTTGAGGACGCGCAAGAACTGGCGGGCTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGCGAATACAGAACAGGTTTGTCTGACGTTCTCCTCGGTGATCGAGAGTAAACGCTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCTGCGACCGATAAAGCGCCATCCACTCATACTTCACCGGTCGTGCCCGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGCCAGGGATATGGTGTTGCTGGCGTCAACTACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTGGGGCGAAACCATCTCCTTTGGTATCGATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGGGGCGAATATTGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGACGATGTACGCAAGGTCTTTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAACGGTGCGACGCTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATTGAGCAGTTTAATACGGGTCAGGCCAAAGAGATCGATACCGCGATTTGTGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCGTTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGTTCCATGTATTCCATGACTCCACCAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCCTTCGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTACGGAAGCGCCTTCTCTTGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTTAACCTGCCGTTTATTTCGCTGGGGCAAGTCGGTGAGGGCAAACTGATGGTTATCGGTAACCCACACTACAACAGCATTTTGCGTTGCCCGAACGGTTACAGCTGGAACGGGGGCGTTAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGTCCGACGATAAATGGAAGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTTAAACGTCATGGTCAGGTTACAGGAAACAGCGCTGCGTTCGACTTCCATCCGGATTTTGCGGGCATCTCTGTTGAGCATTTAAGTAGCTATGGCGATCTCGATCCGCAGGAAATGCCGCTGCTGATCCTTAACGGCTTTGAATATGTGACTCAGGTGGGTAACGATCCTTATGCAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTATCTGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGTTTTGTGCGTCTGTTGGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAATAACGATCCGCAAGGGTATCCGAACCGCGTTCGTCAGCAGCGCGCAACGGGCATTTGGGTCTATGAACGTTATCCTGCCGTAGATGGTGCGCTGCCGTACACCATCGATAGTAAGACAGGGGAAGTTAAGTGGAAATATCAGGTAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCTGGAAGATGTAGATGGCAAACAGGAAACGCGTTATGCCTTTATTGATGAGGCCGATCATAAAACAGAGGATTCTCTGAAGGCTGCGAAGGAGAAAATTTTCGCCGCGTTCCCGGGGCTGAAAGAGTGTACTAATCCGGCATATCACTATGAGGTCAACTGCCTGGAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAACGCCGACACTGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGACCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAACGATACGAGCTATCGTTATGAAGAAGGCAAAAATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGCCAATGATGCCTATGCAGGCGGCACCAAGTGTTCTGCAGATCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGTGACGGTAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGTTACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGGCTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGACGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACTCTCTGGACGCTAGCGGTACGGTGAAGTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAATGAATCTGCCAGCTTCACCTTTACTGGCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAATCAGACGCTTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGGAGCAATTCGCTAACGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGATAGCGAAGACGGTAAGCACCGGATGTTTACCTATAAAAACTTGCCGGGCCACAAACATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCATTCGGGTTATCCGGTAATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGAAGTCGCTAACAACGTGCTGGCGCTGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACAACCAGGCATGGGCACGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAGGAATGGGCAGAGAAAAACTTTGATATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAAGAATTACTGTGCTGAATCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCCGGGCGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCTTACAACACGCTCGCGTCACTCGATCTGCCGAAACCGGAACAGGGACCGGAAACCATTAATCAGGTTACCGAGCATAAGATGTCTGCCGAGTAA", + "dna_sequence_length": 4563, + "functions": [ + "putative secreted and surface-associated lipoprotein mucinase" + ], + "id": "CDS_2927", + "location": [ + [ + "NC_000913", + 3119112, + "-", + 4563 + ] + ], + "md5": "b78a303578bed2c46d2c2527c1ddedab", + "parent_gene": "", + "protein_md5": "68224df5eba91d973872663ddd881146", + "protein_translation": "MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWKPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNDTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLDLPKPEQGPETINQVTEHKMSAE", + "protein_translation_length": 1520, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009763" + ], + [ + "gene_synonym", + "ECK2969" + ], + [ + "gene_synonym", + "EcoGene:EG12995" + ], + [ + "gene_synonym", + "GI:16130875" + ], + [ + "gene_synonym", + "GeneID:947259" + ], + [ + "gene_synonym", + "JW2942" + ], + [ + "gene_synonym", + "NP_417449.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46839" + ], + [ + "gene_synonym", + "b2975" + ], + [ + "gene_synonym", + "glcA" + ], + [ + "gene_synonym", + "yghK" + ] + ], + "dna_sequence": "ATGGTTACCTGGACCCAAATGTATATGCCGATGGGAGGACTGGGGCTATCCGCTCTGGTCGCCCTGATCCCGATAATATTCTTCTTCGTTGCACTCGCGGTATTACGTCTGAAAGGACATGTCGCTGGAGCAATAACCCTTATATTATCTATCCTGATTGCAATATTCGCCTTTAAAATGCCGATTGATATGGCATTTGCTGCTGCGGGCTATGGCTTTATTTATGGATTATGGCCAATAGCGTGGATTATTGTCGCGGCGGTGTTCCTGTATAAATTAACCGTTGCCAGCGGGCAGTTCGATATTATCCGCAGCTCGGTTATCTCCATCACCGACGATCAGCGTTTGCAGGTGTTACTGATTGGTTTCTCCTTTGGTGCGTTGCTGGAAGGAGCGGCTGGCTTTGGTGCGCCGGTGGCGATTACCGGTGCGCTGCTGGTGGGCCTGGGCTTCAAACCGTTATACGCGGCGGGGCTGTGTCTGATTGCCAATACTGCGCCGGTGGCGTTTGGTGCGTTGGGCGTGCCGATTCTGGTCGCCGGTCAGGTAACGGGAATCGATCCGTTCCACATTGGCGCAATGGCGGGACGTCAGTTACCGTTCCTGTCGGTTCTTGTGCCGTTCTGGCTGGTAGCAATGATGGACGGCTGGAAAGGGGTGAAAGAGACGTGGCCAGCGGCGCTGGTTGCTGGGGGAAGCTTCGCTGTCACTCAGTTCTTTACCTCTAACTATATTGGTCCGGAACTGCCGGATATTACTTCGGCGCTGGTGAGTATCGTCTCACTCGCTTTATTCCTTAAAGTCTGGCGGCCGAAAAATACCGAAACGGCAATCAGCATGGGACAATCCGCAGGTGCGATGGTGGTAAATAAGCCATCTTCTGGCGGTCCCGTGCCTTCAGAATATAGTCTGGGGCAAATCATTCGAGCGTGGTCACCGTTTTTAATCTTAACGGTGCTGGTCACCATCTGGACCATGAAGCCGTTTAAAGCGTTATTTGCTCCGGGCGGCGCGTTTTATTCACTGGTGATTAATTTCCAGATCCCTCATTTGCATCAACAAGTGTTGAAAGCGGCACCCATTGTCGCCCAACCAACGCCAATGGATGCGGTGTTTAAATTCGACCCCCTCTCGGCTGGCGGCACCGCTATTTTTATTGCGGCGATTATCTCTATCTTCATCCTCGGTGTGGGGATCAAGAAAGGTATTGGCGTCTTTGCCGAAACGCTAATTAGCTTGAAGTGGCCGATACTGTCGATTGGCATGGTGCTGGCGTTCGCCTTCGTCACCAACTATTCTGGCATGTCCACCACGCTGGCGCTGGTACTGGCAGGTACAGGCGTGATGTTCCCGTTCTTCTCACCGTTTCTCGGCTGGCTGGGCGTATTCCTTACCGGCTCGGACACCTCCTCTAACGCCCTGTTTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCGGCGGCGTAACTGGCAAGATGATCTCCCCGCAATCTATCGCCGTGGCCTGCGCCGCGACGGGCATGGTGGGCCGAGAATCTGAACTGTTCCGCTACACCGTGAAGCACAGTCTGATTTTTGCCAGCGTTATCGGCATTATCACCCTGCTGCAGGCGTATGTGTTTACCGGGATGTTAGTCTCGTAA", + "dna_sequence_length": 1683, + "functions": [ + "glycolate transporter" + ], + "id": "CDS_2928", + "location": [ + [ + "NC_000913", + 3121279, + "-", + 1683 + ] + ], + "md5": "043f30c585d61a85e5c254626f78747b", + "parent_gene": "", + "protein_md5": "0256f1ad517e34581d1a27dd025f04fa", + "protein_translation": "MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKMPIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLLIGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVAGQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFFTSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPSEYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAPIVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQSTTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFASVIGIITLLQAYVFTGMLVS", + "protein_translation_length": 560, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009767" + ], + [ + "gene_synonym", + "ECK2970" + ], + [ + "gene_synonym", + "EcoGene:EG20080" + ], + [ + "gene_synonym", + "GI:16130876" + ], + [ + "gene_synonym", + "GeneID:948857" + ], + [ + "gene_synonym", + "JW2943" + ], + [ + "gene_synonym", + "NP_417450.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37330" + ], + [ + "gene_synonym", + "b2976" + ], + [ + "gene_synonym", + "glc" + ], + [ + "gene_synonym", + "glcB" + ] + ], + "dna_sequence": "ATGAGTCAAACCATAACCCAGAGCCGTTTACGCATTGACGCCAATTTTAAACGTTTTGTGGATGAAGAAGTTTTACCGGGAACAGGGCTGGACGCTGCGGCGTTCTGGCGCAATTTTGATGAGATCGTTCATGATCTGGCACCAGAAAATCGTCAGTTGCTGGCAGAACGCGATCGCATTCAGGCAGCGCTTGATGAGTGGCATCGCAGCAATCCGGGGCCGGTAAAAGATAAAGCGGCCTATAAATCTTTCCTGCGTGAACTGGGCTACCTGGTGCCGCAACCGGAGCGCGTGACGGTGGAAACCACGGGCATTGACAGCGAAATCACCAGCCAGGCGGGGCCGCAGCTGGTGGTTCCGGCAATGAACGCCCGCTACGCGCTGAACGCGGCGAACGCTCGCTGGGGCTCACTGTACGATGCGTTATACGGCAGCGACATCATCCCGCAGGAAGGGGCGATGGTCAGCGGCTACGATCCGCAACGCGGTGAGCAGGTTATCGCCTGGGTTCGGCGTTTCCTCGATGAATCTCTACCGCTGGAAAACGGCAGCTATCAGGATGTGGTGGCGTTTAAGGTGGTTGATAAACAATTACGCATCCAGTTGAAAAATGGTAAAGAAACCACGTTACGTACTCCAGCACAGTTTGTCGGTTACCGTGGCGATGCCGCTGCGCCGACCTGCATTTTGCTGAAAAATAACGGCCTGCATATTGAGCTGCAAATCGATGCCAATGGGCGGATTGGCAAAGACGATCCGGCGCACATCAACGATGTTATCGTCGAAGCTGCTATCAGTACCATTCTCGACTGCGAAGATTCGGTCGCGGCGGTTGATGCGGAAGATAAAATCCTGCTGTACCGCAACCTGCTGGGCCTGATGCAGGGGACTCTGCAAGAGAAAATGGAGAAAAACGGTCGGCAAATCGTGCGTAAACTGAATGACGATCGTCATTACACCGCCGCCGATGGCTCTGAAATTTCTCTGCACGGACGCTCGCTGCTGTTTATCCGCAACGTGGGTCATTTGATGACCATTCCTGTGATTTGGGACAGCGAAGGCAATGAAATCCCGGAAGGCATTCTTGATGGCGTCATGACTGGCGCGATTGCCCTCTATGATTTAAAAGTGCAGAAAAACTCGCGCACTGGCAGCGTCTATATTGTGAAACCGAAAATGCACGGTCCGCAGGAAGTGGCGTTCGCCAACAAACTGTTTACCCGCATTGAGACAATGCTCGGTATGGCACCGAATACCCTGAAAATGGGCATTATGGATGAAGAACGTCGGACCTCGCTGAACTTGCGTAGCTGTATCGCTCAGGCGCGCAACCGCGTGGCGTTCATCAATACCGGTTTCCTCGACCGTACCGGCGATGAAATGCATTCGGTGATGGAAGCTGGCCCGATGCTGCGTAAAAATCAGATGAAATCGACGCCTTGGATCAAAGCCTACGAGCGTAATAACGTGCTTTCCGGTCTGTTCTGTGGGCTGCGCGGTAAAGCGCAAATTGGTAAAGGCATGTGGGCAATGCCGGACCTGATGGCAGACATGTACAGCCAGAAGGGCGACCAACTGCGTGCCGGGGCAAACACAGCCTGGGTTCCGTCACCAACCGCTGCTACGCTCCATGCGCTGCACTACCACCAAACCAACGTACAGAGCGTACAAGCCAACATTGCCCAGACCGAGTTCAATGCTGAATTTGAACCGCTGCTGGACGATCTGCTGACTATTCCGGTTGCTGAAAACGCTAACTGGTCGGCGCAAGAGATCCAACAAGAGCTGGATAACAACGTGCAGGGGATTCTGGGGTACGTGGTGCGCTGGGTGGAGCAGGGGATTGGTTGTTCAAAAGTGCCGGATATTCACAATGTGGCGTTGATGGAAGACCGCGCAACGCTGCGTATCTCCAGCCAGCATATCGCCAACTGGTTACGTCACGGTATTCTGACCAAAGAACAGGTGCAGGCGTCGCTGGAGAATATGGCGAAAGTGGTTGATCAGCAAAACGCTGGCGATCCGGCTTATCGTCCGATGGCGGGGAATTTCGCTAACTCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAA", + "dna_sequence_length": 2172, + "functions": [ + "malate synthase G" + ], + "id": "CDS_2929", + "location": [ + [ + "NC_000913", + 3123805, + "-", + 2172 + ] + ], + "md5": "dcb51afcb1fc0ef311043dd8120de7a5", + "parent_gene": "", + "protein_md5": "1461bb5c0af6c1a3aebae69669861fdd", + "protein_translation": "MSQTITQSRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVETTGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKESH", + "protein_translation_length": 723, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009769" + ], + [ + "gene_synonym", + "ECK2971" + ], + [ + "gene_synonym", + "EcoGene:EG12952" + ], + [ + "gene_synonym", + "GI:16130877" + ], + [ + "gene_synonym", + "GeneID:947473" + ], + [ + "gene_synonym", + "JW2944" + ], + [ + "gene_synonym", + "NP_417451.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEQ1" + ], + [ + "gene_synonym", + "b2977" + ], + [ + "gene_synonym", + "glcG" + ], + [ + "gene_synonym", + "yghC" + ] + ], + "dna_sequence": "ATGAAAACTAAAGTCATTCTTAGCCAGCAAATGGCGAGTGCAATTATTGCCGCAGGTCAGGAAGAGGCGCAGAAAAATAACTGGTCTGTTTCCATTGCTGTTGCCGATGACGGCGGTCATCTGCTGGCGTTAAGTCGCATGGACGATTGCGCGCCGATTGCGGCTTATATCTCCCAGGAGAAAGCGCGTACCGCCGCGCTGGGGCGTCGTGAAACTAAGGGCTATGAAGAGATGGTGAACAACGGACGTACCGCGTTCGTGACTGCGCCGTTATTAACGTCGCTGGAAGGCGGCGTACCGGTTGTTGTGGATGGGCAAATTATTGGTGCCGTGGGCGTTTCTGGTTTAACCGGAGCACAGGATGCGCAGGTCGCGAAAGCGGCAGCAGCGGTGTTGGCGAAATAA", + "dna_sequence_length": 405, + "functions": [ + "DUF336 family protein" + ], + "id": "CDS_2930", + "location": [ + [ + "NC_000913", + 3124231, + "-", + 405 + ] + ], + "md5": "b5dd0656fcbbe786933292ca64ea6e72", + "parent_gene": "", + "protein_md5": "a877b45cd5ab13c71ade9f179fbb0c9c", + "protein_translation": "MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQDAQVAKAAAAVLAK", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174097" + ], + [ + "gene_synonym", + "ECK2972" + ], + [ + "gene_synonym", + "EcoGene:EG13291" + ], + [ + "gene_synonym", + "GI:49176294" + ], + [ + "gene_synonym", + "GeneID:2847717" + ], + [ + "gene_synonym", + "JW5486" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52074" + ], + [ + "gene_synonym", + "YP_026190.1" + ], + [ + "gene_synonym", + "b4467" + ], + [ + "gene_synonym", + "glcF" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "yghL" + ] + ], + "dna_sequence": "ATGCAAACCCAATTAACTGAAGAGATGCGGCAGAACGCGCGCGCGCTGGAAGCCGACAGCATCCTGCGCGCCTGTGTTCACTGCGGATTTTGTACCGCAACCTGCCCAACCTATCAGCTTCTGGGCGATGAACTGGACGGGCCGCGCGGGCGCATCTATCTGATTAAACAGGTGCTGGAAGGCAACGAAGTCACGCTTAAAACACAGGAGCATCTCGATCGCTGCCTCACTTGCCGTAATTGTGAAACCACCTGTCCTTCTGGTGTGCGCTATCACAATTTGCTGGATATCGGGCGTGATATTGTCGAGCAGAAAGTGAAACGCCCACTGCCGGAGCGAATACTGCGCGAAGGATTGCGCCAGGTAGTGCCGCGTCCGGCGGTCTTCCGTGCGCTGACGCAGGTAGGGCTGGTGCTGCGACCGTTTTTACCGGAACAGGTCAGAGCAAAACTGCCTGCTGAAACGGTGAAAGCTAAACCGCGTCCGCCGCTGCGCCATAAGCGTCGGGTTTTAATGTTGGAAGGCTGCGCCCAGCCTACGCTTTCGCCCAACACCAACGCGGCAACTGCGCGAGTGCTGGATCGTCTGGGGATCAGCGTCATGCCAGCTAACGAAGCAGGCTGTTGTGGCGCGGTGGACTATCATCTTAATGCGCAGGAGAAAGGGCTGGCACGGGCGCGCAATAATATTGATGCCTGGTGGCCCGCGATTGAAGCAGGTGCCGAGGCAATTTTGCAAACCGCCAGCGGCTGCGGCGCGTTTGTCAAAGAGTATGGGCAGATGCTGAAAAACGATGCGTTATATGCCGATAAAGCACGTCAGGTCAGTGAACTGGCGGTCGATTTAGTCGAACTTCTGCGCGAGGAACCGCTGGAAAAACTGGCAATTCGCGGCGATAAAAAGCTGGCCTTCCACTGTCCGTGTACCCTACAACATGCGCAAAAGCTGAACGGCGAAGTGGAAAAAGTGTTGCTTCGTCTTGGATTTACCTTAACGGACGTTCCCGACAGCCATCTGTGCTGCGGTTCAGCGGGAACATATGCGTTAACGCATCCCGATCTGGCACGCCAGCTGCGGGATAACAAAATGAATGCGCTGGAAAGCGGCAAACCGGAAATGATCGTCACCGCCAACATTGGTTGCCAGACGCATCTGGCGAGCGCCGGTCGTACCTCTGTGCGTCACTGGATTGAAATTGTAGAACAAGCCCTTGAAAAGGAATAA", + "dna_sequence_length": 1224, + "functions": [ + "glycolate oxidase 4Fe-4S iron-sulfur cluster subunit" + ], + "id": "CDS_2931", + "location": [ + [ + "NC_000913", + 3125459, + "-", + 1224 + ] + ], + "md5": "4bafe0653ef4292e8ab71d48128cdce0", + "parent_gene": "", + "protein_md5": "07a02f69d8d9bd332d5c5b9ca422a886", + "protein_translation": "MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIVEQKVKRPLPERILREGLRQVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKPRPPLRHKRRVLMLEGCAQPTLSPNTNAATARVLDRLGISVMPANEAGCCGAVDYHLNAQEKGLARARNNIDAWWPAIEAGAEAILQTASGCGAFVKEYGQMLKNDALYADKARQVSELAVDLVELLREEPLEKLAIRGDKKLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDVPDSHLCCGSAGTYALTHPDLARQLRDNKMNALESGKPEMIVTANIGCQTHLASAGRTSVRHWIEIVEQALEKE", + "protein_translation_length": 407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174098" + ], + [ + "gene_synonym", + "ECK2973" + ], + [ + "gene_synonym", + "EcoGene:EG12996" + ], + [ + "gene_synonym", + "GI:49176295" + ], + [ + "gene_synonym", + "GeneID:2847718" + ], + [ + "gene_synonym", + "JW5487" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52073" + ], + [ + "gene_synonym", + "YP_026191.1" + ], + [ + "gene_synonym", + "b4468" + ], + [ + "gene_synonym", + "glcE" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "yghL" + ] + ], + "dna_sequence": "ATGCTACGCGAGTGTGATTACAGCCAGGCGCTGCTGGAGCAGGTGAATCAGGCGATTAGCGATAAAACGCCGCTGGTGATTCAGGGCAGCAATAGCAAAGCCTTTTTAGGTCGCCCTGTCACCGGGCAAACGCTGGATGTTCGTTGTCATCGCGGCATTGTTAATTACGACCCGACCGAGCTGGTGATAACCGCGCGTGTCGGAACGCCGCTGGTGACAATTGAAGCGGCGCTGGAAAGCGCGGGGCAAATGCTCCCCTGTGAGCCGCCGCATTATGGTGAAGAAGCCACCTGGGGCGGGATGGTCGCCTGCGGGCTGGCGGGGCCGCGTCGCCCGTGGAGCGGTTCGGTCCGCGATTTTGTCCTCGGCACGCGCATCATTACCGGCGCTGGAAAACATCTGCGTTTTGGTGGCGAAGTGATGAAAAACGTTGCCGGATACGATCTCTCACGGTTAATGGTCGGAAGCTACGGTTGTCTTGGCGTGCTCACTGAAATCTCAATGAAAGTGTTACCGCGACCGCGCGCCTCCCTGAGCCTGCGTCGGGAAATCAGCCTGCAAGAAGCCATGAGTGAAATCGCCGAGTGGCAACTCCAGCCATTACCCATTAGTGGCTTATGTTACTTCGACAATGCGTTGTGGATCCGCCTTGAGGGCGGCGAAGGATCGGTAAAAGCAGCGCGTGAACTGCTGGGTGGCGAAGAGGTTGCCGGTCAGTTCTGGCAGCAATTGCGTGAACAACAACTGCCGTTCTTCTCGTTACCAGGTACCTTATGGCGCATTTCATTACCCAGTGATGCGCCGATGATGGATTTACCCGGCGAGCAACTGATCGACTGGGGCGGGGCGTTACGCTGGCTGAAATCGACAGCCGAGGACAATCAAATCCATCGCATCGCCCGCAACGCTGGCGGTCATGCGACCCGCTTTAGTGCCGGAGATGGTGGCTTTGCCCCGCTATCGGCTCCTTTATTCCGCTATCACCAGCAGCTTAAACAGCAGCTCGACCCTTGCGGCGTGTTTAACCCCGGTCGCATGTACGCGGAACTTTGA", + "dna_sequence_length": 1053, + "functions": [ + "glycolate oxidase FAD binding subunit" + ], + "id": "CDS_2932", + "location": [ + [ + "NC_000913", + 3126522, + "-", + 1053 + ] + ], + "md5": "9bed154f7a8928644d371305536cdea8", + "parent_gene": "", + "protein_md5": "d023a1f843149102295f1c8655cb7dd8", + "protein_translation": "MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMVGSYGCLGVLTEISMKVLPRPRASLSLRREISLQEAMSEIAEWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVAGQFWQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTAEDNQIHRIARNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQLDPCGVFNPGRMYAEL", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009773" + ], + [ + "gene_synonym", + "ECK2974" + ], + [ + "gene_synonym", + "EcoGene:EG12997" + ], + [ + "gene_synonym", + "GI:16130879" + ], + [ + "gene_synonym", + "GeneID:947353" + ], + [ + "gene_synonym", + "JW2946" + ], + [ + "gene_synonym", + "NP_417453.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEP9" + ], + [ + "gene_synonym", + "b2979" + ], + [ + "gene_synonym", + "glcD" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "yghM" + ] + ], + "dna_sequence": "ATGAGCATCTTGTACGAAGAGCGTCTTGATGGCGCTTTACCCGATGTCGACCGCACATCGGTACTGATGGCACTGCGTGAGCATGTCCCTGGACTTGAGATCCTGCATACCGATGAGGAGATCATTCCTTACGAGTGTGACGGGTTGAGCGCGTATCGCACGCGTCCATTACTGGTTGTTCTGCCTAAGCAAATGGAACAGGTGACAGCGATTCTGGCTGTCTGCCATCGCCTGCGTGTACCGGTGGTGACCCGTGGTGCAGGCACCGGGCTTTCTGGTGGCGCGCTGCCGCTGGAAAAAGGTGTGTTGTTGGTGATGGCGCGCTTTAAAGAGATCCTCGACATTAACCCCGTTGGTCGCCGCGCGCGCGTGCAGCCAGGCGTGCGTAACCTGGCGATCTCCCAGGCCGTTGCACCGCATAATCTCTACTACGCACCGGACCCTTCCTCACAAATCGCCTGTTCCATTGGCGGCAATGTGGCTGAAAATGCCGGCGGCGTCCACTGCCTGAAATATGGTCTGACCGTACATAACCTGCTGAAAATTGAAGTGCAAACGCTGGACGGCGAGGCACTGACGCTTGGATCGGACGCGCTGGATTCACCTGGTTTTGACCTGCTGGCGCTGTTCACCGGATCGGAAGGTATGCTCGGCGTGACCACCGAAGTGACGGTAAAACTGCTGCCGAAGCCGCCCGTGGCGCGGGTTCTGTTAGCCAGCTTTGACTCGGTAGAAAAAGCCGGACTTGCGGTTGGTGACATCATCGCCAATGGCATTATCCCCGGCGGGCTGGAGATGATGGATAACCTGTCGATCCGCGCGGCGGAAGATTTTATTCATGCCGGTTATCCCGTCGACGCCGAAGCGATTTTGTTATGCGAGCTGGACGGCGTGGAGTCTGACGTACAGGAAGACTGCGAGCGGGTTAACGACATCTTGTTGAAAGCGGGCGCGACTGACGTCCGTCTGGCACAGGACGAAGCAGAGCGCGTACGTTTCTGGGCCGGTCGCAAAAATGCGTTCCCGGCGGTAGGACGTATCTCCCCGGATTACTACTGCATGGATGGCACCATCCCGCGTCGCGCCCTGCCTGGCGTACTGGAAGGCATTGCCCGTTTATCGCAGCAATATGATTTACGTGTTGCCAACGTCTTTCATGCCGGAGATGGCAACATGCACCCGTTAATCCTTTTCGATGCCAACGAACCCGGTGAATTTGCCCGCGCGGAAGAGCTGGGCGGGAAGATCCTCGAACTCTGCGTTGAAGTTGGCGGCAGCATCAGTGGCGAACATGGCATCGGGCGAGAAAAAATCAATCAAATGTGCGCCCAGTTCAACAGCGATGAAATCACGACCTTCCATGCGGTCAAGGCGGCGTTTGACCCCGATGGTTTGCTGAACCCTGGGAAAAACATTCCCACGCTACACCGCTGTGCTGAATTTGGTGCCATGCATGTGCATCACGGTCATTTACCTTTCCCTGAACTGGAGCGTTTCTGA", + "dna_sequence_length": 1500, + "functions": [ + "glycolate oxidase subunit, FAD-linked" + ], + "id": "CDS_2933", + "location": [ + [ + "NC_000913", + 3128021, + "-", + 1500 + ] + ], + "md5": "2cce014a72207a952a7e3c4093e69d06", + "parent_gene": "", + "protein_md5": "89bb9b613b675dd2f4cc12cbb2dd3c21", + "protein_translation": "MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPYECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRCAEFGAMHVHHGHLPFPELERF", + "protein_translation_length": 499, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009777" + ], + [ + "gene_synonym", + "ECK2975" + ], + [ + "gene_synonym", + "EcoGene:EG12998" + ], + [ + "gene_synonym", + "GI:16130880" + ], + [ + "gene_synonym", + "GeneID:947466" + ], + [ + "gene_synonym", + "JW2947" + ], + [ + "gene_synonym", + "NP_417454.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACL5" + ], + [ + "gene_synonym", + "b2980" + ], + [ + "gene_synonym", + "glcC" + ], + [ + "gene_synonym", + "yghN" + ] + ], + "dna_sequence": "ATGAAAGATGAACGTCGCCCTATTTGCGAAGTGGTTGCAGAGAGTATCGAACGGTTAATTATCGACGGCGTACTGAAGGTCGGTCAGCCGCTTCCCTCGGAACGTCGACTGTGTGAAAAGCTCGGCTTCTCACGCTCCGCACTGCGTGAAGGGCTGACCGTGCTGCGCGGGCGCGGGATTATTGAAACGGCGCAGGGTCGCGATTCTCGTGTCGCACGGCTTAATCGGGTGCAGGACACCAGCCCGCTGATCCATCTGTTCAGTACGCAGCCGCGAACGCTGTACGATCTGCTCGACGTTCGCGCATTACTGGAGGGCGAATCGGCAAGGCTGGCGGCAACGCTGGGAACGCAGGCTGATTTTGTTGTGATAACCCGCTGTTATGAAAAAATGCTCGCCGCCAGTGAGAACAACAAAGAGATTTCGCTGATCGAACATGCGCAGTTGGATCACGCTTTCCATCTCGCCATTTGTCAGGCTTCTCACAATCAGGTGCTGGTGTTTACGCTGCAATCATTGACCGATCTGATGTTTAATTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG", + "dna_sequence_length": 765, + "functions": [ + "glycolate-inducible glc operon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_2934", + "location": [ + [ + "NC_000913", + 3128272, + "+", + 765 + ] + ], + "md5": "5ec2b3adc2d4ec1819a42e5642c98d91", + "parent_gene": "", + "protein_md5": "5906ab6a487a988f797855890557a11d", + "protein_translation": "MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQADFVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGHHLIRSAVPLEMNLS", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009779" + ], + [ + "gene_synonym", + "ECK2976" + ], + [ + "gene_synonym", + "EcoGene:EG12999" + ], + [ + "gene_synonym", + "GeneID:947701" + ], + [ + "gene_synonym", + "JW5848" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46840" + ], + [ + "gene_synonym", + "b2981" + ], + [ + "gene_synonym", + "yghO" + ] + ], + "dna_sequence": "AATAAAAATGACCTTAAGGCATTTATCGCTTTTCCGTCATCACTTTATCCCGACGATCCAAACTGGATACCCCCTTTATTCATTGAACGCAACGAGCATTTGTCTGCGAAAAATCCGGGGACGGACCATATCATCTGGCAGGCGTGGGTGGCAAAAAAAGCGGGGCAGATAGTTGGGCGTATTACCGCGCAAATAGATACCTTGCACCGCGAGCGTTACGGCAAAGATACCGGTCATTTCGGCATGATTGACGCCATTGATGATCCGCAGGTTTTTGCCGCGTTGTTTGGCGCAGCGGAAGCGTGGTTGAAGTCACAAGGTGCAAGTAAGATCAGCGGTCCTTTCAGCCTGAATATCAATCAGGAAAGCGGATTACTGATTGAAGGTTTTGACACACCACCCTGTGCGATGATGCCACACGGCAAACCGTGGTATGCCGCGCATATTGAACAACTGGGTTATCACAAAGGCATTGATTTACTGGCGTGGTGGATGCAGCGAACCGATCTCACTTTCTCTCCGGCGCTAAAAAAACTGATGGATCAGGTGCGCAAAAAGGTGACCATTCGCTGCATCAATCGTCAGCGGTTTGCCGAAGAGATGCAGATCCTGCGTGAGATTTTCAACTCTGGCTGGCAGCACAACTGGGGATTTGTGCCGTTTACCGAACATGAATTCGCGACCATGGGCGATCAACTTAAATATCTGGTGCCGGACGATATGATCTATATCGCTGAGATTGATTCTGCACCCTGCGCGTTTATTGTCGGCTTGCCGAACATCAACGAGGCGATTGCCGATCTGAACGGATCGCTCTTTCCCTTCGGCTGGGCAAAATTGCTGTGGCGTTTGAAAGTCAGCGGTGTGCGAACTGCGCGAGTACCGCTGATGGGCGTGCGCGACGAGTATCAGTTCAGCCGCATCGGCCCGGTGATTGCGCTGTTATTGATTGAAGCCTTACGCGATCCGTTTGCCCGCCGGAAGATCGATGCGCTGGAGATGTCATGGATCCTCGAAACCAATACAGGCATGAATAACATGCTGGAACGCATTGGGGCGGAGCCGTACAAGCGTTACCGATTGTATGAAAAGCAGATTTAA", + "dna_sequence_length": 1101, + "id": "CDS_2935", + "location": [ + [ + "NC_000913", + 3130143, + "-", + 1101 + ] + ], + "md5": "c54b79a91111b6d87c93ce9e2bfe0e06", + "parent_gene": "", + "protein_md5": "5c45ca49a6f305f4599f02e61a9a3403", + "protein_translation": "NKNDLKAFIAFPSSLYPDDPNWIPPLFIERNEHLSAKNPGTDHIIWQAWVAKKAGQIVGRITAQIDTLHRERYGKDTGHFGMIDAIDDPQVFAALFGAAEAWLKSQGASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYAAHIEQLGYHKGIDLLAWWMQRTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQILREIFNSGWQHNWGFVPFTEHEFATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIADLNGSLFPFGWAKLLWRLKVSGVRTARVPLMGVRDEYQFSRIGPVIALLLIEALRDPFARRKIDALEMSWILETNTGMNNMLERIGAEPYKRYRLYEKQI", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009783" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16130882" + ], + [ + "gene_synonym", + "GeneID:947516" + ], + [ + "gene_synonym", + "NP_417456.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE56" + ], + [ + "gene_synonym", + "b2982" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_2936", + "location": [ + [ + "NC_000913", + 3130178, + "+", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009786" + ], + [ + "gene_synonym", + "ECK2977" + ], + [ + "gene_synonym", + "EcoGene:EG13001" + ], + [ + "gene_synonym", + "GI:49176296" + ], + [ + "gene_synonym", + "GeneID:947716" + ], + [ + "gene_synonym", + "JW5490" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46841" + ], + [ + "gene_synonym", + "YP_026192.1" + ], + [ + "gene_synonym", + "b2983" + ], + [ + "gene_synonym", + "yghQ" + ] + ], + "dna_sequence": "TTGGCGGGTTTTAACATCAAACATTGGTTTGCAGATGGCGCGTTTCGCACCATTATTCGCAATAGCGCCTGGTTAGGCTCCAGTAATGTCGTGAGCGCCTTGCTGGGTCTGTTGGCGCTCTCGTGTGCCGGTAAAGGGATGACGCCCGCCATGTTTGGCGTACTGGTGATTGTGCAATCGTACGCCAAGTCGATCAGCGATTTTATTAAGTTTCAGACATGGCAACTGGTGGTTCAGTACGGAACACCAGCATTAACCAACAATAATCCGCAGCAATTCCGCAATGTCGTCTCATTTTCCTTCTCGCTGGATATCGTCAGCGGCGCGGTGGCGATTGTCGGTGGCATTGCCTTACTGCCATTCCTTTCCCATTCATTAGGTCTGGATGACCAAAGTTTTTGGCTGGCAGCGCTCTATTGCACGCTCATTCCTTCAATGGCTTCCTCCACGCCGACCGGCATTCTGCGTGCGGTAGATCGCTTCGATTTAATTGCTGTACAGCAGGCGACGAAACCTTTTCTGCGCGCAGCGGGGAGCGTCGTAGCCTGGTATTTTGACTTTGGTTTTGCGGGTTTTGTTATTGCCTGGTACGTGTCGAATCTGGTTGGCGGCACCATGTACTGGTGGTTTGCCGCGCGCGAATTACGCCGCCGAAATATCCATAACGCCTTCAAATTGAATCTGTTTGAGTCTGCCCGATACATTAAAGGCGCGTGGAGTTTTGTCTGGTCAACCAACATTGCCCACTCCATCTGGTCGGCGCGTAACTCGTGCAGCACAGTGTTGGTGGGGATCGTGTTAGGACCCGCTGCCGCCGGGTTATTTAAAATCGCCATGACATTCTTCGACGCCGCCGGAACGCCAGCGGGTTTGCTGGGTAAAAGTTTTTACCCAGAGGTGATGCGTTTAGATCCGCGCACCACCAGACCGTGGTTGTTAGGTGTGAAGTCCGGTTTACTGGCGGGCGGAATCGGTATTCTGGTGGCGCTCGCGGTGTTGATCGTCGGCAAGCCGCTCATTTCGCTGGTGTTTGGCGTTAAGTATCTCGAAGCGTATGACCTGATTTAG", + "dna_sequence_length": 1068, + "functions": [ + "putative inner membrane polysaccharide flippase" + ], + "id": "CDS_2937", + "location": [ + [ + "NC_000913", + 3132408, + "-", + 1068 + ] + ], + "md5": "4eb896ba83b94cc18455822811c30ed6", + "parent_gene": "", + "protein_md5": "70690dd040a4353aefc6d9c391f3d765", + "protein_translation": "MAGFNIKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAGKGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFSLDIVSGAVAIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARYIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLEAYDLI", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009789" + ], + [ + "gene_synonym", + "ECK2978" + ], + [ + "gene_synonym", + "EcoGene:EG13002" + ], + [ + "gene_synonym", + "GI:16130884" + ], + [ + "gene_synonym", + "GeneID:947310" + ], + [ + "gene_synonym", + "JW2952" + ], + [ + "gene_synonym", + "NP_417458.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64572" + ], + [ + "gene_synonym", + "b2984" + ], + [ + "gene_synonym", + "yghR" + ] + ], + "dna_sequence": "ATGGATGCACTACAAACTCAAACTGTTAATAGTACAACCGCGCCGCAGCCCAACTACATTCCGGGGCTGATTGCGGTGGTCGGGTGTGATGGCACCGGTAAATCCACACTGACCACCGACCTGGTGAAATCGCTGCAACAACACTGGCAAACCGAGCGGCGCTATCTGGGGCTGCTCTCCGGCGAAGACGGCGACAAAATCAAACGATTGCCGTTGGTTGGCGTCTGGCTGGAACGGCGACTGGCGGCCAAATCCTCGAAAACCCAAAGCATGAAAACCAAATCTCCGGCGCTATGGGCGGCGGTGATTATGTACTGCTTCTCGCTGCGAAGAATGGCGAATCTACGCAAGGTTCAGCGACTGGCGCAAAGTGGCGTTCTGGTGGTCAGCGATCGCTTCCCGCAGGCTGAAATTTCGGGCTTTTATTATGATGGACCGGGGATTGGCGTCGAACGTGCGACCGGGAAAATCAGCATGTTTCTGGCGCAGCGCGAACGGCGTTTATACCAACAAATGGCGCAATATCGCCCGGAATTAATTATTCGCCTGGGCATTGATATTGAGACTGCCATCTCCCGCAAGCCTGACCATGACTATGCCGAGCTGCAGGACAAAATCGGTGTCATGTCGAAGATTGGCTATAACGGCACAAAAATTCTTGAGATTGATTCCAGAGCGCCCTACAGCGAAGTGCTGGAACAGGCACAGAAGGCGGTTTCTCTGGTTGCCATCGTTTCTGACCGCCGAAGTTTAACTTAA", + "dna_sequence_length": 759, + "functions": [ + "putative ATP-binding protein" + ], + "id": "CDS_2938", + "location": [ + [ + "NC_000913", + 3133212, + "-", + 759 + ] + ], + "md5": "5cd2a338edba386968adc26ce89c5a7b", + "parent_gene": "", + "protein_md5": "d3f872f6275962a61c7099e106f9d8b7", + "protein_translation": "MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQYRPELIIRLGIDIETAISRKPDHDYAELQDKIGVMSKIGYNGTKILEIDSRAPYSEVLEQAQKAVSLVAIVSDRRSLT", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009793" + ], + [ + "gene_synonym", + "ECK2979" + ], + [ + "gene_synonym", + "EcoGene:EG13003" + ], + [ + "gene_synonym", + "GI:16130885" + ], + [ + "gene_synonym", + "GeneID:947476" + ], + [ + "gene_synonym", + "JW5491" + ], + [ + "gene_synonym", + "NP_417459.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46843" + ], + [ + "gene_synonym", + "b2985" + ], + [ + "gene_synonym", + "yghS" + ] + ], + "dna_sequence": "GTGAATCAACGTAATATGTCAATAATTAATTCCACGCCAGTGCGTGTTATTGCCATTGTAGGATGTGATGGTTCAGGTAAATCGACCCTCACGGCAAGCCTGGTAAATGAACTGGCAGCAAGAATGCCAACAGAACACATTTATCTCGGGCAATCGTCCGGGCGAATTGGCGAATGGATTTCACAGCTCCCTGTTATTGGCGCACCTTTTGGGCGTTATCTGCGAAGTAAAGCGGCACATGTGCACGAAAAGCCCTCAACACCGCCTGGCAATATTACTGCACTGGTTATCTATCTGCTTTCCTGCTGGCGGGCGTACAAGTTTCGCAAAATGTTGTGTAAAAGCCAGCAAGGCTTTCTGCTCATCACCGACCGCTACCCGCAGGTTGAAGTGCCGGGGTTTCGCTTTGATGGCCCGCAATTGGCAAAAACCACGGGCGGTAACGGTTGGATAAAAATGTTAAGGCAGCGCGAGCTGAAGCTGTACCAATGGATGGCATCTTATTTGCCCGTATTGTTGATTCGTCTTGGCATTGATGAACAAACCGCGTTTGCGCGTAAACCTGACCACCAACTGGCAGCGTTACAGGAAAAAATCGCCGTTACGCCGCAACTGACATTCAATGGCGCAAAGATCCTTGAACTGGATGGGCGACACCCCGCCGATGAAATTCTGCAAGCGTCACTACGCGCAATTCACGCCGCGCTTTCCTGA", + "dna_sequence_length": 714, + "functions": [ + "putative ATP-binding protein" + ], + "id": "CDS_2939", + "location": [ + [ + "NC_000913", + 3133957, + "-", + 714 + ] + ], + "md5": "89445a58a1ddd743a10e21e539a13e0a", + "parent_gene": "", + "protein_md5": "14397bad0fe6404df3a57617c0f01a46", + "protein_translation": "MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRHPADEILQASLRAIHAALS", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009798" + ], + [ + "gene_synonym", + "ECK2980" + ], + [ + "gene_synonym", + "EcoGene:EG13004" + ], + [ + "gene_synonym", + "GI:16130886" + ], + [ + "gene_synonym", + "GeneID:947477" + ], + [ + "gene_synonym", + "JW2954" + ], + [ + "gene_synonym", + "NP_417460.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46844" + ], + [ + "gene_synonym", + "b2986" + ], + [ + "gene_synonym", + "yghT" + ] + ], + "dna_sequence": "ATGCAGTCAATAACACCTCCATTAATTGCCGTTATTGGTAGCGATGGTTCAGGCAAGTCAACGGTGTGTGAACATCTTATTACCGTTGTCGAAAAATATGGTGCTGCCGAAAGAGTTCATTTAGGAAAACAGGCCGGAAATGTCGGTCGTGCAGTGACAAAATTACCGTTGATGGGAAAATCCTTACATAAAACAATTGAACGAAATCAGGTGAAAACAGCAAAAAAATTGCCTGGACCAGTTCCGGCGCTGGTAATTACAGCGTTTGTCGCCCGTCGCTTACTGCGCTTTCGTCATATGCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCATAACGCCACAGTTAACCTTTGGTGGTGCACAACTGGTTGATATCGATGCCAATCAGCCACTGGAACAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAG", + "dna_sequence_length": 693, + "functions": [ + "putative ATP-binding protein" + ], + "id": "CDS_2940", + "location": [ + [ + "NC_000913", + 3134131, + "+", + 693 + ] + ], + "md5": "c5c9a3131405a7247ec270d1a042d16c", + "parent_gene": "", + "protein_md5": "af529da62c422464cec1a6ec4144108b", + "protein_translation": "MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009800" + ], + [ + "gene_synonym", + "ECK2981" + ], + [ + "gene_synonym", + "EcoGene:EG12883" + ], + [ + "gene_synonym", + "GI:16130887" + ], + [ + "gene_synonym", + "GeneID:947475" + ], + [ + "gene_synonym", + "JW2955" + ], + [ + "gene_synonym", + "NP_417461.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43676" + ], + [ + "gene_synonym", + "b2987" + ], + [ + "gene_synonym", + "pitB" + ] + ], + "dna_sequence": "ATGCTAAATTTATTTGTTGGCCTTGATATATACACAGGGCTTTTGTTATTGCTTGCTCTGGCATTTGTGTTGTTCTACGAAGCAATCAATGGTTTTCATGACACGGCGAATGCGGTGGCAGCCGTTATTTATACTCGTGCCATGCAACCACAACTTGCTGTGGTGATGGCGGCATTTTTTAACTTTTTTGGCGTGTTATTGGGCGGACTTAGCGTTGCCTATGCCATTGTCCATATGTTGCCAACCGATTTGTTGCTGAATATGGGGTCAACCCACGGCCTGGCGATGGTCTTTTCCATGCTGCTGGCGGCGATTATCTGGAACCTGGGAACGTGGTTCTTCGGTTTACCGGCCTCCAGTTCGCACACCTTGATTGGTGCGATTATCGGCATCGGTTTAACCAACGCGCTGTTAACCGGCTCATCGGTGATGGATGCGTTAAACCTGCGTGAAGTGACCAAAATTTTCTCCTCGCTGATTGTTTCCCCTATCGTCGGCCTGGTCATTGCGGGAGGCCTGATATTCCTGCTGCGACGCTACTGGAGCGGGACGAAAAAGCGTGACCGTATTCACCGCATTCCGGAAGATCGCAAAAAGAAAAAAGGCAAACGTAAACCGCCATTCTGGACGCGTATTGCGCTGATTGTTTCCGCTGCGGGCGTGGCGTTTTCGCACGGCGCGAACGACGGACAAAAAGGGATCGGCCTGGTAATGCTGGTACTGGTGGGGATTGCCCCTGCTGGCTTCGTCGTCAATATGAATGCGTCCGGCTATGAAATTACCCGTACCCGCGATGCCGTTACCAACTTCGAACACTACCTGCAACAGCATCCTGAACTGCCGCAGAAGTTGATTGCGATGGAACCTCCATTGCCTGCAGCATCGACTGATGGCACGCAAGTAACAGAGTTTCACTGTCATCCGGCAAATACCTTTGATGCTATTGCGCGCGTTAAAACGATGCTGCCAGGCAATATGGAAAGTTACGAGCCGTTAAGCGTGAGTCAGCGCAGCCAGCTGCGCCGCATTATGCTGTGCATCTCTGATACCTCCGCGAAGCTAGCGAAACTGCCAGGCGTCAGTAAAGAAGACCAGAACCTGCTGAAAAAACTTCGCAGCGATATGTTAAGCACCATTGAGTACGCTCCGGTGTGGATCATCATGGCGGTAGCACTGGCGCTCGGCATTGGCACCATGATTGGCTGGCGTCGTGTAGCGATGACCATCGGTGAGAAGATTGGTAAGCGCGGCATGACGTATGCGCAAGGCATGGCGGCACAAATGACGGCGGCAGTGTCTATCGGTCTTGCCAGTTATATTGGGATGCCCGTCTCCACAACACACGTCCTCTCGTCTGCAGTTGCAGGGACGATGGTGGTGGACGGCGGTGGGTTACAGCGTAAAACGGTAACCAGCATCCTGATGGCGTGGGTATTTACTTTACCGGCGGCAATTTTTCTTTCTGGTGGGCTGTACTGGATAGCATTGCAGTTGATTTAA", + "dna_sequence_length": 1500, + "functions": [ + "phosphate transporter" + ], + "id": "CDS_2941", + "location": [ + [ + "NC_000913", + 3136371, + "-", + 1500 + ] + ], + "md5": "bcab0776d22f874fd379040acb6be4d0", + "parent_gene": "", + "protein_md5": "6172b58c5c135df201c48fa84ad539cc", + "protein_translation": "MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI", + "protein_translation_length": 499, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009804" + ], + [ + "gene_synonym", + "ECK2982" + ], + [ + "gene_synonym", + "EcoGene:EG12882" + ], + [ + "gene_synonym", + "GI:16130888" + ], + [ + "gene_synonym", + "GeneID:947474" + ], + [ + "gene_synonym", + "JW2956" + ], + [ + "gene_synonym", + "NP_417462.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES0" + ], + [ + "gene_synonym", + "b2988" + ], + [ + "gene_synonym", + "gsp" + ], + [ + "gene_synonym", + "gss" + ] + ], + "dna_sequence": "ATGAGCAAAGGAACGACCAGCCAGGATGCCCCGTTCGGGACATTATTGGGCTACGCCCCAGGTGGGGTAGCAATCTACTCTTCAGATTACAGTTCTCTCGATCCGCAGGAATACGAAGATGACGCCGTATTCCGTAGCTATATCGACGACGAATATATGGGCCACAAGTGGCAATGCGTTGAATTTGCTCGCCGTTTTCTCTTTCTGAATTACGGTGTGGTCTTTACTGACGTGGGTATGGCGTGGGAGATTTTCTCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGCGTGCGCCGGTCGCGGGTGCGCTTCTTATCTGGGATAAAGGCGGTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACAAAGTCCGTATTGCGGAACAGAACGTGATTCATTCCCCGTTGCCGCAAGGGCAACAGTGGACGCGCGAGCTGGAGATGGTGGTCGAAAACGGCTGCTATACCCTGAAAGACACTTTTGATGACACCACCATTCTGGGCTGGATGATCCAGACGGAAGATACTGAATACAGCTTACCGCAGCCGGAAATTGCAGGCGAGCTGCTGAAAATCAGCGGAGCGCGCCTGGAAAACAAAGGCCAGTTTGACGGTAAATGGCTGGATGAAAAAGATCCGCTGCAAAACGCCTATGTGCAGGCCAACGGTCAGGTGATCAATCAGGATCCTTATCATTACTACACCATTACCGAGAGTGCCGAGCAGGAGCTAATTAAAGCCACCAACGAGCTGCACCTGATGTATCTTCACGCAACCGACAAGGTGCTGAAAGATGACAACCTGCTGGCGCTGTTCGACATCCCGAAAATCCTCTGGCCACGTTTGCGTCTCTCCTGGCAGCGTCGCCGTCACCATATGATCACTGGTCGTATGGATTTCTGCATGGATGAGCGTGGCCTGAAGGTTTACGAGTACAACGCCGACTCCGCCTCCTGTCATACCGAAGCGGGCTTGATCCTCGAACGTTGGGCGGAGCAGGGCTATAAAGGCAACGGCTTCAATCCGGCGGAAGGGCTGATTAACGAATTGGCTGGTGCCTGGAAACACAGTCGTGCACGTCCGTTTGTCCATATCATGCAGGACAAAGATATCGAGGAAAACTATCACGCGCAGTTTATGGAGCAGGCGCTGCACCAGGCGGGCTTTGAAACGCGTATCTTGCGTGGATTGGATGAACTGGGCTGGGATGCTGCCGGGCAACTGATTGATGGGGAAGGGCGACTGGTTAACTGCGTGTGGAAAACCTGGGCGTGGGAAACCGCGTTTGATCAGATTCGTGAAGTTAGCGACCGTGAGTTTGCTGCGGTGCCAATCCGTACCGGTCATCCGCAAAACGAAGTGCGTCTTATCGACGTATTGCTGCGCCCGGAAGTGCTGGTCTTTGAGCCGCTGTGGACGGTGATCCCCGGCAACAAAGCGATTCTGCCGATCCTCTGGTCGCTGTTCCCGCACCATCGTTACCTGCTGGATACCGATTTCACTGTTAATGATGAACTGGTGAAAACAGGTTACGCAGTGAAACCGATCGCCGGTCGCTGTGGCAGCAATATCGACCTCGTCAGCCATCATGAAGAGGTGCTGGACAAAACCAGCGGTAAATTTGCCGAGCAGAAAAACATCTATCAGCAACTGTGGTGTTTGCCGAAAGTGGACGGTAAATACATTCAGGTATGTACCTTCACCGTTGGCGGCAACTACGGTGGGACGTGTTTGCGCGGTGATGAATCACTGGTCATCAAAAAAGAGAGTGATATTGAACCGTTAATTGTGGTGAAAAAGTAA", + "dna_sequence_length": 1860, + "functions": [ + "glutathionylspermidine amidase and glutathionylspermidine synthetase" + ], + "id": "CDS_2942", + "location": [ + [ + "NC_000913", + 3138522, + "-", + 1860 + ] + ], + "md5": "4cec01abacf403ba1a8797bad1a54c73", + "parent_gene": "", + "protein_md5": "1bec76be687a06418a3a114017a4ad6f", + "protein_translation": "MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK", + "protein_translation_length": 619, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009812" + ], + [ + "gene_synonym", + "ECK2983" + ], + [ + "gene_synonym", + "EcoGene:EG13005" + ], + [ + "gene_synonym", + "GI:90111524" + ], + [ + "gene_synonym", + "GeneID:947472" + ], + [ + "gene_synonym", + "JW5492" + ], + [ + "gene_synonym", + "NP_417463.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46845" + ], + [ + "gene_synonym", + "b2989" + ], + [ + "gene_synonym", + "yghU" + ] + ], + "dna_sequence": "ATGACAGACAATACTTATCAGCCCGCGAAAGTCTGGACGTGGGATAAATCCGCTGGCGGCGCGTTCGCCAATATCAATCGCCCGGTTTCTGGTCCGACGCATGAAAAAACGCTGCCCGTTGGCAAACACCCATTGCAACTTTATTCGCTGGGAACGCCGAACGGTCAGAAAGTAACGATTATGCTTGAGGAGCTGCTGGCGCTGGGCGTTACTGGTGCAGAGTACGACGCCTGGCTGATTCGTATTGGCGATGGCGATCAATTCTCCAGCGGCTTTGTCGAAGTGAACCCAAACTCGAAGATCCCGGCGCTGCGCGATCATACGCATAATCCGCCGATCCGCGTGTTTGAATCTGGTTCGATCCTGCTTTATCTGGCGGAGAAATTTGGCTACTTCCTGCCGCAGGATTTGGCAAAGCGTACTGAAACGATGAACTGGCTGTTCTGGTTACAGGGCGCGGCACCGTTCCTCGGCGGTGGTTTTGGTCACTTTTACCATTACGCACCGGTAAAGATTGAGTACGCCATCAACCGCTTTACCATGGAAGCCAAACGTCTGCTCGACGTGCTGGATAAGCAACTGGCGCAGCATAAGTTTGTTGCGGGCGATGAGTACACCATTGCGGATATGGCGATTTGGCCGTGGTTTGGCAACGTGGTGTTAGGTGGTGTGTATGATGCCGCTGAGTTTCTTGATGCGGGCAGTTATAAGCATGTACAACGCTGGGCGAAAGAAGTAGGCGAACGTCCGGCGGTGAAACGTGGGCGTATTGTTAACCGCACCAACGGACCGCTGAATGAGCAGTTGCATGAGCGCCATGACGCCAGTGATTTCGAGACGAATACGGAAGATAAGCGTCAGGGGTAA", + "dna_sequence_length": 867, + "functions": [ + "putative S-transferase" + ], + "id": "CDS_2943", + "location": [ + [ + "NC_000913", + 3138727, + "+", + 867 + ] + ], + "md5": "87225b72cb1b9c2fb8e2c588589f10ba", + "parent_gene": "", + "protein_md5": "676d35389c27f40daf8cdec20faf357b", + "protein_translation": "MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDASDFETNTEDKRQG", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009816" + ], + [ + "gene_synonym", + "ECK2984" + ], + [ + "gene_synonym", + "EcoGene:EG11805" + ], + [ + "gene_synonym", + "GI:16130890" + ], + [ + "gene_synonym", + "GeneID:948020" + ], + [ + "gene_synonym", + "JW2958" + ], + [ + "gene_synonym", + "NP_417464.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAM7" + ], + [ + "gene_synonym", + "b2990" + ], + [ + "gene_synonym", + "hybG" + ] + ], + "dna_sequence": "ATGTGTATTGGCGTTCCAGGCCAGGTGCTGGCTGTCGGTGAAGATATTCACCAGCTTGCGCAGGTTGAAGTATGTGGTATCAAGCGCGATGTGAATATCGCCCTGATTTGTGAAGGTAACCCTGCCGATCTACTGGGCCAGTGGGTGCTGGTACACGTCGGATTTGCCATGAGCATCATCGACGAAGATGAAGCCAAAGCCACATTAGACGCACTGCGCCAAATGGATTACGACATTACCAGCGCGTGA", + "dna_sequence_length": 249, + "functions": [ + "hydrogenase 2 accessory protein" + ], + "id": "CDS_2944", + "location": [ + [ + "NC_000913", + 3139964, + "-", + 249 + ] + ], + "md5": "276c98663f62cd26ef8ad69a7f3dfbf1", + "parent_gene": "", + "protein_md5": "3799010f2d3257da5915e46316f35c2e", + "protein_translation": "MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009818" + ], + [ + "gene_synonym", + "ECK2985" + ], + [ + "gene_synonym", + "EcoGene:EG11804" + ], + [ + "gene_synonym", + "GI:16130891" + ], + [ + "gene_synonym", + "GeneID:948004" + ], + [ + "gene_synonym", + "JW5493" + ], + [ + "gene_synonym", + "NP_417465.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A703" + ], + [ + "gene_synonym", + "b2991" + ], + [ + "gene_synonym", + "hybF" + ] + ], + "dna_sequence": "ATGCATGAGTTGTCTCTTTGCCAGAGCGCCGTTGAAATTATCCAACGGCAGGCGGAGCAGCACGATGTTAAGCGCGTCACCGCCGTGTGGCTGGAAATTGGCGCGCTCTCCTGCGTTGAGGAGAGCGCCGTCCGTTTTAGTTTTGAAATTGTCTGCCACGGAACGGTGGCGCAAGGGTGCGATTTACATATCGTCTATAAACCCGCCCAGGCTTGGTGCTGGGATTGCAGCCAGGTGGTGGAGATTCATCAGCACGATGCGCAGTGTCCGCTCTGTCACGGCGAGCGGTTGCGTGTCGATACCGGCGATTCGCTGATCGTCAAAAGTATTGAAGTTGAATAA", + "dna_sequence_length": 342, + "functions": [ + "protein involved with the maturation of hydrogenases 1 and 2" + ], + "id": "CDS_2945", + "location": [ + [ + "NC_000913", + 3140318, + "-", + 342 + ] + ], + "md5": "eb2a3c2a9500e21933a3fa6db8cea8f0", + "parent_gene": "", + "protein_md5": "488b64d8d7d1d62b8dc4c69da2641139", + "protein_translation": "MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTGDSLIVKSIEVE", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009824" + ], + [ + "gene_synonym", + "ECK2986" + ], + [ + "gene_synonym", + "EcoGene:EG11803" + ], + [ + "gene_synonym", + "GI:16130892" + ], + [ + "gene_synonym", + "GeneID:947483" + ], + [ + "gene_synonym", + "JW2960" + ], + [ + "gene_synonym", + "NP_417466.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN1" + ], + [ + "gene_synonym", + "b2992" + ], + [ + "gene_synonym", + "hybE" + ] + ], + "dna_sequence": "ATGACTGAAGAGATAGCAGGTTTCCAGACCTCCCCGAAGGCGCAAGTACAGGCAGCGTTTGAAGAAATTGCCCGGCGTTCGATGCACGATCTCTCTTTTCTGCATCCTTCAATGCCGGTGTATGTTTCTGATTTTACGCTGTTCGAAGGTCAGTGGACGGGGTGTGTGATCACCCCGTGGATGCTGAGTGCAGTTATCTTCCCCGGCCCGGATCAACTCTGGCCGCTGCGCAAAGTGAGTGAAAAAATTGGTCTGCAACTGCCGTATGGCACTATGACCTTTACCGTTGGCGAACTGGACGGTGTTTCGCAATATCTCTCCTGTTCGCTGATGTCGCCGCTTTCGCACAGCATGTCGATTGAAGAGGGCCAACGCCTGACGGATGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGCTGTTTGGTCGCAGGAGTGGCGAAAATGCATGA", + "dna_sequence_length": 489, + "functions": [ + "hydrogenase 2-specific chaperone" + ], + "id": "CDS_2946", + "location": [ + [ + "NC_000913", + 3140799, + "-", + 489 + ] + ], + "md5": "ac28a7fc857b48c0ec910396d13db728", + "parent_gene": "", + "protein_md5": "d3def59d2540f906d8b31bd384435782", + "protein_translation": "MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009826" + ], + [ + "gene_synonym", + "ECK2987" + ], + [ + "gene_synonym", + "EcoGene:EG11802" + ], + [ + "gene_synonym", + "GI:16130893" + ], + [ + "gene_synonym", + "GeneID:948982" + ], + [ + "gene_synonym", + "JW2961" + ], + [ + "gene_synonym", + "NP_417467.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37182" + ], + [ + "gene_synonym", + "b2993" + ], + [ + "gene_synonym", + "hybD" + ] + ], + "dna_sequence": "ATGCGTATTTTAGTCTTAGGGGTCGGCAATATTTTGCTGACCGATGAAGCCATCGGTGTGCGGATTGTCGAAGCGTTAGAGCAACGATACATTCTGCCGGATTATGTTGAGATCCTCGATGGCGGCACGGCGGGAATGGAGCTGCTTGGCGACATGGCAAATCGCGATCATTTGATTATTGCGGATGCCATTGTCTCGAAAAAGAACGCGCCGGGAACGATGATGATCCTGCGGGATGAAGAAGTTCCGGCGTTGTTTACCAACAAAATCTCTCCGCATCAGCTTGGCCTGGCCGACGTCTTGTCGGCCCTGCGCTTCACCGGCGAGTTTCCGAAAAAGCTGACCCTGGTCGGCGTGATCCCGGAATCGCTGGAGCCACACATCGGCTTAACGCCGACGGTTGAAGCAATGATTGAACCTGCGCTTGAGCAGGTTCTGGCTGCGCTGCGTGAATCTGGCGTGGAAGCCATCCCACGGGAGGCGATTCATGACTGA", + "dna_sequence_length": 495, + "functions": [ + "maturation protease for hydrogenase 2" + ], + "id": "CDS_2947", + "location": [ + [ + "NC_000913", + 3141286, + "-", + 495 + ] + ], + "md5": "78da0ffebe953eb0cfbdd23cf54f5f66", + "parent_gene": "", + "protein_md5": "6b8d2f28091535c5185ecdc941bd4798", + "protein_translation": "MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLIIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPREAIHD", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009828" + ], + [ + "gene_synonym", + "ECK2988" + ], + [ + "gene_synonym", + "EcoGene:EG11801" + ], + [ + "gene_synonym", + "GI:16130894" + ], + [ + "gene_synonym", + "GeneID:945182" + ], + [ + "gene_synonym", + "JW2962" + ], + [ + "gene_synonym", + "NP_417468.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE0" + ], + [ + "gene_synonym", + "b2994" + ], + [ + "gene_synonym", + "hybC" + ] + ], + "dna_sequence": "ATGAGCCAGAGAATTACTATTGATCCGGTAACCCGTATTGAGGGGCATTTACGCATCGATTGCGAAATCGAAAATGGCGTCGTTTCGAAAGCATGGGCTTCCGGTACCATGTGGCGCGGCATGGAAGAGATCGTGAAAAACCGCGATCCGCGCGATGCATGGATGATTGTGCAACGTATCTGTGGCGTATGTACTACCACTCACGCGCTGTCTTCCGTTCGTGCGGCAGAAAGTGCGCTGAATATCGACGTTCCGGTTAACGCGCAATACATCCGTAACATCATTCTGGCTGCGCACACCACGCATGACCATATTGTTCATTTCTATCAGCTTTCGGCGCTGGACTGGGTGGACATCACTTCTGCACTGCAAGCTGACCCAACCAAAGCCTCCGAAATGCTGAAAGGCGTTTCGACCTGGCACCTGAACAGTCCGGAAGAGTTCACCAAAGTTCAGAACAAGATCAAAGATCTGGTTGCCAGCGGTCAGTTGGGTATTTTCGCTAATGGCTACTGGGGTCATCCGGCGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGCAGGTTTATAAGGTTGATACCGCAGTTATTGCCGCGTTCTACCCGGAATGGCTGACACGCGGTAAAGGTGCGGTGAACTACCTGAGCGTGCCGGAATTCCCGACCGACAGTAAAAACGGCAGCTTCCTGTTCCCGGGCGGCTACATTGAGAATGCGGATCTGTCCTCGTATCGTCCGATCACTTCTCATTCCGATGAATACCTGATCAAAGGCATTCAGGAAAGCGCGAAGCACTCCTGGTATAAAGACGAAGCGCCGCAGGCACCGTGGGAAGGCACCACCATTCCGGCTTATGATGGTTGGTCTGACGACGGGAAATATTCCTGGGTGAAATCACCGACTTTCTACGGCAAAACGGTAGAAGTGGGGCCACTGGCTAATATGCTGGTGAAACTGGCGGCAGGTCGCGAATCTACCCAGAACAAACTGAATGAAATCGTTGCGATTTATCAGAAACTGACTGGCAACACGCTGGAAGTGGCACAGCTGCACTCCACGCTGGGCCGTATTATTGGTCGTACCGTTCACTGCTGTGAATTGCAGGATATCCTGCAAAACCAATACAGTGCACTGATCACCAATATCGGCAAAGGCGATCACACCACCTTTGTGAAGCCGAACATTCCGGCAACGGGTGAATTCAAAGGTGTTGGCTTCCTCGAAGCGCCGCGCGGTATGCTCTCTCACTGGATGGTTATTAAAGACGGTATCATCAGCAACTACCAGGCGGTTGTTCCATCAACCTGGAACTCTGGTCCGCGTAACTTCAATGATGACGTCGGTCCTTACGAGCAGTCGCTGGTGGGTACACCGGTTGCCGATCCGAATAAACCGCTGGAAGTGGTGCGTACCATTCACTCCTTTGACCCGTGCATGGCCTGTGCGGTACACGTAGTGGATGCTGACGGCAACGAAGTGGTTTCAGTGAAGGTTCTGTAA", + "dna_sequence_length": 1704, + "functions": [ + "hydrogenase 2, large subunit" + ], + "id": "CDS_2948", + "location": [ + [ + "NC_000913", + 3142989, + "-", + 1704 + ] + ], + "md5": "8c3535c939a44ab1b0d8b02f59e1c9b6", + "parent_gene": "", + "protein_md5": "d90a1ebb127f654db3d4a7c56ce5df07", + "protein_translation": "MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKVL", + "protein_translation_length": 567, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009830" + ], + [ + "gene_synonym", + "ECK2989" + ], + [ + "gene_synonym", + "EcoGene:EG11800" + ], + [ + "gene_synonym", + "GI:16130895" + ], + [ + "gene_synonym", + "GeneID:948615" + ], + [ + "gene_synonym", + "JW5494" + ], + [ + "gene_synonym", + "NP_417469.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37180" + ], + [ + "gene_synonym", + "b2995" + ], + [ + "gene_synonym", + "hybB" + ] + ], + "dna_sequence": "ATGAGTCATGATCCACAACCGCTGGGCGGCAAAATCATCAGTAAACCGGTCATGATTTTTGGACCGTTAATCGTCATCTGTATGCTCCTGATTGTGAAGCGTCTGGTGTTCGGTCTGGGCTCTGTCTCTGACCTGAACGGCGGCTTCCCGTGGGGCGTGTGGATCGCGTTTGACCTGCTGATTGGCACCGGCTTTGCCTGTGGCGGCTGGGCGCTGGCGTGGGCGGTATACGTCTTTAACCGTGGGCAATACCATCCGCTGGTGCGTCCGGCGCTGTTGGCGAGTCTGTTTGGTTACTCACTGGGTGGCTTGTCGATCACTATCGACGTGGGTCGCTACTGGAACCTGCCGTACTTCTACATTCCGGGTCACTTCAACGTGAACTCGGTACTGTTCGAGACGGCGGTCTGTATGACCATCTATATCGGCGTGATGGCACTGGAGTTTGCTCCGGCACTGTTTGAACGTCTGGGGTGGAAGGTGTCGCTACAGCGACTAAACAAGGTGATGTTCTTCATCATCGCGCTCGGTGCGCTGCTGCCGACCATGCACCAGTCTTCAATGGGGTCGCTGATGATCTCGGCGGGCTACAAGGTGCATCCGTTGTGGCAGAGCTATGAAATGTTGCCGCTGTTCTCGCTGCTGACGGCGTTCATCATGGGCTTCTCGATTGTCATCTTTGAAGGTTCGCTGGTGCAGGCGGGTCTGCGTGGCAACGGTCCGGATGAAAAGAGTCTGTTTGTTAAGCTGACCAACACCATCAGTGTGTTGCTGGCGATTTTCATCGTGCTGCGCTTTGGCGAGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTCCTGCTGATGCTCTTCCCGCTGGTCGTTCTGCGTGTGGCGAAGCTGCGTAATGATTCCCGCATGCTGTTCCTGTCAGCACTGAGCGCACTGTTAGGTTGTGCAACCTGGCGTCTGACCTATTCGCTGGTGGCATTCAACCCGGGCGGCGGTTACGCCTACTTCCCGACCTGGGAAGAACTGTTGATTTCTATTGGTTTTGTGGCTATTGAGATTTGCGCTTACATCGTACTCATTCGTCTACTGCCGATACTTCCTCCTTTAAAACAAAACGATCATAATCGTCATGAGGCGAGCAAAGCATGA", + "dna_sequence_length": 1179, + "functions": [ + "putative hydrogenase 2 cytochrome b type component" + ], + "id": "CDS_2949", + "location": [ + [ + "NC_000913", + 3144164, + "-", + 1179 + ] + ], + "md5": "9b585739572959a943b5a9d453f5aa1f", + "parent_gene": "", + "protein_md5": "cd9f5956f94fc8cb7105b18e978d56f7", + "protein_translation": "MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSDLNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLGGLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWKVSLQRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAFIMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLSLAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSLVAFNPGGGYAYFPTWEELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009832" + ], + [ + "gene_synonym", + "ECK2990" + ], + [ + "gene_synonym", + "EcoGene:EG11799" + ], + [ + "gene_synonym", + "GI:16130896" + ], + [ + "gene_synonym", + "GeneID:944842" + ], + [ + "gene_synonym", + "JW2964" + ], + [ + "gene_synonym", + "NP_417470.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ8" + ], + [ + "gene_synonym", + "b2996" + ], + [ + "gene_synonym", + "hybA" + ], + [ + "gene_synonym", + "hydL" + ] + ], + "dna_sequence": "GTGAACAGACGTAATTTTATTAAAGCAGCCTCCTGCGGGGCATTGCTGACGGGCGCGCTGCCGTCTGTCAGTCATGCGGCTGCTGAAAACCGCCCGCCAATTCCGGGATCGCTGGGGATGTTGTACGACTCGACCTTGTGCGTAGGCTGCCAGGCTTGCGTCACCAAGTGTCAGGATATCAATTTCCCTGAACGTAACCCGCAAGGGGAACAGACCTGGTCGAACAACGACAAACTGTCGCCGTATACCAATAACATCATTCAGGTGTGGACCAGCGGCACAGGGGTCAACAAAGACCAGGAGGAGAACGGCTACGCGTACATTAAGAAACAGTGTATGCACTGCGTCGATCCGAACTGTGTCTCTGTGTGCCCGGTCTCTGCACTGAAAAAAGATCCGAAAACCGGCATTGTCCATTACGACAAAGATGTGTGCACCGGCTGCCGTTACTGCATGGTCGCCTGTCCGTACAACGTGCCGAAGTACGACTACAACAACCCGTTTGGTGCGCTGCATAAGTGCGAGCTGTGCAACCAGAAAGGTGTGGAACGTCTCGATAAAGGCGGTCTACCTGGCTGCGTAGAAGTGTGCCCGGCGGGCGCGGTGATTTTCGGTACGCGTGAAGAGCTGATGGCGGAGGCGAAAAAACGTCTGGCGCTGAAGCCTGGCAGCGAATACCACTATCCGCGTCAGACGCTGAAATCTGGCGACACTTACCTGCATACGGTGCCGAAATATTATCCGCATCTGTACGGCGAGAAAGAGGGCGGCGGTACTCAGGTTCTGGTACTGACGGGTGTGCCTTATGAAAATCTCGACCTGCCGAAACTGGACGATCTTTCTACCGGTGCGCGTTCCGAAAATATTCAACACACCCTGTATAAAGGCATGATGCTACCACTGGCTGTGCTGGCGGGCTTAACCGTGCTGGTTCGTCGCAACACCAAAAACGACCATCACGACGGAGGAGACGATCATGAGTCATGA", + "dna_sequence_length": 987, + "functions": [ + "hydrogenase 2 4Fe-4S ferredoxin-type component" + ], + "id": "CDS_2950", + "location": [ + [ + "NC_000913", + 3145140, + "-", + 987 + ] + ], + "md5": "057d04b7e57d891486aed8361dd81634", + "parent_gene": "", + "protein_md5": "68fae63339caa66a8e8a0285af7d95a0", + "protein_translation": "MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDSTLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009834" + ], + [ + "gene_synonym", + "ECK2991" + ], + [ + "gene_synonym", + "EcoGene:EG13006" + ], + [ + "gene_synonym", + "GI:16130897" + ], + [ + "gene_synonym", + "GeneID:945902" + ], + [ + "gene_synonym", + "JW2965" + ], + [ + "gene_synonym", + "NP_417471.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69741" + ], + [ + "gene_synonym", + "b2997" + ], + [ + "gene_synonym", + "hybO" + ], + [ + "gene_synonym", + "yghV" + ] + ], + "dna_sequence": "ATGACTGGAGATAACACCCTCATCCATTCTCACGGCATTAACCGTCGTGATTTCATGAAGCTTTGTGCAGCATTAGCCGCCACCATGGGGTTAAGTAGCAAAGCCGCTGCAGAGATGGCCGAATCGGTTACTAACCCGCAGCGTCCGCCAGTTATCTGGATTGGCGCGCAGGAGTGCACCGGTTGTACGGAATCTCTGCTTCGTGCAACGCATCCAACGGTAGAAAACCTCGTACTGGAGACTATCTCTCTGGAGTATCACGAAGTGCTTTCCGCCGCCTTCGGTCATCAGGTCGAAGAGAACAAACATAACGCTCTCGAGAAGTACAAAGGGCAGTATGTGTTAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCGCAGCAGCCATTATCGCTATCGGTTCCTGCTCTGCGTGGGGCGGTGTTGCCGCAGCTGGAGTTAACCCAACTGGCGCAGTCAGCCTGCAAGAAGTTCTGCCAGGCAAAACCGTTATCAATATTCCGGGCTGCCCGCCGAACCCGCACAACTTCCTCGCGACCGTTGCGCACATCATCACTTACGGCAAACCGCCGAAACTGGATGACAAAAACCGTCCGACCTTCGCCTATGGCCGTCTGATTCACGAACACTGCGAACGTCGCCCGCACTTCGATGCTGGTCGTTTTGCCAAAGAGTTCGGTGATGAAGGCCACCGCGAAGGCTGGTGCCTGTACCACCTCGGCTGTAAAGGGCCAGAAACTTACGGCAACTGCTCAACGCTGCAATTCTGCGATGTTGGCGGTGTGTGGCCGGTGGCGATTGGTCACCCTTGCTATGGCTGTAACGAAGAAGGTATCGGCTTCCATAAAGGCATCCATCAGCTTGCCAACGTCGAAAATCAAACTCCGCGTTCACAGAAACCGGATGTTAACGCTAAAGAGGGCGGCAACGTCTCTGCAGGCGCTATTGGTTTGCTCGGCGGTGTGGTTGGGTTGGTTGCCGGTGTCAGCGTGATGGCGGTGCGTGAACTGGGTCGTCAGCAAAAGAAAGATAACGCTGACTCACGGGGAGAATAA", + "dna_sequence_length": 1119, + "functions": [ + "hydrogenase 2, small subunit" + ], + "id": "CDS_2951", + "location": [ + [ + "NC_000913", + 3146261, + "-", + 1119 + ] + ], + "md5": "2b8eab03e6a133e3a7d88831ca8c9955", + "parent_gene": "", + "protein_md5": "557bfd076e53f845aacbe58a6a58980b", + "protein_translation": "MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009839" + ], + [ + "gene_synonym", + "ECK2992" + ], + [ + "gene_synonym", + "EcoGene:EG13007" + ], + [ + "gene_synonym", + "GI:16130898" + ], + [ + "gene_synonym", + "GeneID:947485" + ], + [ + "gene_synonym", + "JW2966" + ], + [ + "gene_synonym", + "NP_417472.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64574" + ], + [ + "gene_synonym", + "b2998" + ], + [ + "gene_synonym", + "yghW" + ] + ], + "dna_sequence": "ATGAATAACCATTTTGGTAAAGGCTTAATGGCGGGATTAAAAGCAACGCATGCCGACAGTGCGGTTAATGTGACAAAATTCTGTGCCGATTATAAACGCGGTTTTGTATTAGGCTACTCACACCGGATGTACGAAAAGACCGGAGATCGCCAGCTTAGCGCCTGGGAAGCGGGTATTCTGACGCGCCGCTATGGACTGGATAAAGAGATGGTAATGGATTTCTTTCGTGAGAATAATTCCTGTTCTACGTTGCGCTTTTTTATGGCCGGTTATCGCCTCGAAAATTGA", + "dna_sequence_length": 288, + "functions": [ + "DUF2623 family protein" + ], + "id": "CDS_2952", + "location": [ + [ + "NC_000913", + 3146737, + "-", + 288 + ] + ], + "md5": "0ce20ef7c848d1029e6abdf5c62d50df", + "parent_gene": "", + "protein_md5": "f462ced71b96ba4ecec883716611ad36", + "protein_translation": "MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009842" + ], + [ + "gene_synonym", + "ASAP:ABE-0009844" + ], + [ + "gene_synonym", + "ECK2993" + ], + [ + "gene_synonym", + "EcoGene:EG13008" + ], + [ + "gene_synonym", + "GeneID:2847694" + ], + [ + "gene_synonym", + "JW5926" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q7DFU6" + ], + [ + "gene_synonym", + "b4658" + ], + [ + "gene_synonym", + "yghX" + ], + [ + "gene_synonym", + "yghY" + ] + ], + "dna_sequence": "ATGACTATTACGCTCACGGGAAAATCTCGAAACGTGAGTTCCTCAACCTTGCGGCGAAGTGCGGTAGGCGGGATGACGGCATTAGCGTTGTTTGATTTGCTCAAGCCAAATTATGCGCTGGCGACTCAGGTAGAGTTTACCGACCCGGAAATTGTTGCTGAGTACATCACGTATCCTTCGCCAAATGGTCACGGCGAGGTGCGGGGTTATCTGGTGAAGCCCGCAAAGATGAGCGGCAAAACGCCAGCCGTAGTGGTGGTGCATGAGAATCGTGGACTGAATCCGTATATCGAAGATGTGGCACGGCGAGTGGCGAAGGCGGGGTATATCGCCCTGGCACCTGACGGCTTAAGTTCCGTTGGAGGTTATCCGGGAAATGATGATAAAGGTCGTGAGCTGCAACAGCAGGTTGATCCAACAAAACTGATGAATGATTTCTTTGCCGCAATTGAGTTTATGCAACGCTATCCGCAAGCGACAGGCAAAGTGGGTATTACCGGATTTTGCTATGGCGGTGGCGTATCGAACGCGGCGGCTGTCGCGTATCCGGAACTGGCCTGCGCGGTGCCGTTTTATGGTCGTCAGGCACCCACTGCCGATGTGGCGAAGATTGAAGCGCCTTTACTACTCCACTTCGCGGAACTGGACACCCGAATCAACGAGGGCTGGCCTGCTTACGAGGCGGCGTTGAAAGCCAATAATAAGGTTTATGAGGCGTATATCTATCCGGGGGTTAATCACGGATTCCATAATGATTCCACGCCCCGTTATGACAAATCTGCCGCCGATCTTGCCTGGCAAAGGACACTGAAATGGTTCGATAAATATCTCTCCTGA", + "dna_sequence_length": 837, + "id": "CDS_2953", + "location": [ + [ + "NC_000913", + 3147691, + "-", + 420 + ], + [ + "NC_000913", + 3147272, + "-", + 417 + ] + ], + "md5": "47976eeceb67465081c47395d0bbc7b7", + "parent_gene": "", + "protein_md5": "1fae68fb48e60cd0cd38976b99e95e35", + "protein_translation": "MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009848" + ], + [ + "gene_synonym", + "ECK2995" + ], + [ + "gene_synonym", + "EcoGene:EG13010" + ], + [ + "gene_synonym", + "GI:16130899" + ], + [ + "gene_synonym", + "GeneID:947480" + ], + [ + "gene_synonym", + "JW2970" + ], + [ + "gene_synonym", + "NP_417474.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46851" + ], + [ + "gene_synonym", + "b3001" + ], + [ + "gene_synonym", + "gpr" + ], + [ + "gene_synonym", + "mgrA" + ], + [ + "gene_synonym", + "yghZ" + ] + ], + "dna_sequence": "ATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGCTCGGTTTATGGCACAATTTCGGTCACGTTAACGCGCTGGAATCACAGCGTGCGATCCTGCGTAAAGCGTTTGATTTGGGCATTACGCACTTTGATTTAGCCAACAATTACGGGCCGCCTCCAGGAAGCGCAGAAGAGAACTTTGGTCGCCTGCTGCGGGAGGATTTTGCCGCTTATCGCGATGAACTGATTATCTCTACCAAGGCTGGCTACGATATGTGGCCCGGCCCTTACGGCTCTGGCGGTTCACGTAAATACCTGCTCGCCAGCCTCGACCAAAGCCTGAAGCGTATGGGGCTTGAGTATGTCGATATCTTTTACTCTCATCGCGTCGATGAAAATACGCCGATGGAAGAAACCGCCTCTGCGCTGGCTCATGCGGTACAAAGCGGTAAGGCGCTGTATGTCGGGATCTCCTCTTACTCGCCAGAGCGGACGCAAAAAATGGTCGAGTTGCTGCGCGAGTGGAAAATTCCGCTGTTAATTCATCAACCTTCGTACAATTTACTGAACCGCTGGGTGGATAAAAGCGGCCTGCTGGATACCCTGCAAAATAACGGCGTGGGCTGTATTGCCTTTACTCCTCTGGCTCAGGGATTGCTGACCGGAAAATATCTCAACGGCATTCCGCAAGATTCACGGATGCATCGTGAAGGGAATAAAGTTCGTGGTCTGACACCGAAAATGCTTACCGAAGCCAACCTCAACAGCCTGCGCTTATTGAATGAAATGGCACAGCAGCGTGGACAATCAATGGCGCAAATGGCGTTAAGCTGGTTGCTGAAAGATGATCGCGTGACGTCGGTATTGATTGGTGCCAGCCGCGCGGAGCAACTAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGA", + "dna_sequence_length": 1041, + "functions": [ + "L-glyceraldehyde 3-phosphate reductase" + ], + "id": "CDS_2954", + "location": [ + [ + "NC_000913", + 3147897, + "+", + 1041 + ] + ], + "md5": "5d97fcae3919f5cc9cfff9d620c14e0c", + "parent_gene": "", + "protein_md5": "1dc4fbae30f91e3c3e48867ad308b7d2", + "protein_translation": "MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIADGELNLWQASSDK", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009850" + ], + [ + "gene_synonym", + "ECK2996" + ], + [ + "gene_synonym", + "EcoGene:EG13011" + ], + [ + "gene_synonym", + "GI:16130900" + ], + [ + "gene_synonym", + "GeneID:947479" + ], + [ + "gene_synonym", + "JW2971" + ], + [ + "gene_synonym", + "NP_417475.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67244" + ], + [ + "gene_synonym", + "b3002" + ], + [ + "gene_synonym", + "yqhA" + ] + ], + "dna_sequence": "ATGGAACGTTTTCTTGAAAATGCAATGTATGCTTCTCGCTGGCTGCTTGCCCCCGTGTACTTTGGCCTTTCGCTGGCGTTAGTTGCCCTGGCGCTGAAGTTCTTCCAGGAGATTATTCACGTACTGCCGAATATCTTCTCGATGGCGGAATCAGATTTGATCCTCGTGTTGCTGTCGCTGGTGGATATGACGCTGGTTGGCGGTTTGCTGGTGATGGTGATGTTTTCCGGTTATGAGAATTTCGTCTCACAGCTGGATATCTCCGAGAACAAAGAGAAGCTGAACTGGCTGGGGAAAATGGACGCAACGTCGCTGAAAAACAAAGTAGCAGCGTCGATTGTGGCAATTTCTTCCATTCACTTACTGCGCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGA", + "dna_sequence_length": 495, + "functions": [ + "UPF0114 family putative inner membrane protein" + ], + "id": "CDS_2955", + "location": [ + [ + "NC_000913", + 3149471, + "-", + 495 + ] + ], + "md5": "c077a8088eca9a0d41643724a623385d", + "parent_gene": "", + "protein_md5": "ea52332cb2bb7fff6c16aee08c7f9baf", + "protein_translation": "MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009859" + ], + [ + "gene_synonym", + "ECK2997" + ], + [ + "gene_synonym", + "EcoGene:EG11292" + ], + [ + "gene_synonym", + "GI:16130901" + ], + [ + "gene_synonym", + "GeneID:947478" + ], + [ + "gene_synonym", + "JW2972" + ], + [ + "gene_synonym", + "NP_417476.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG84" + ], + [ + "gene_synonym", + "b3003" + ], + [ + "gene_synonym", + "yghA" + ] + ], + "dna_sequence": "ATGTCTCATTTAAAAGACCCGACCACGCAGTATTACACTGGTGAATATCCCAAACAGAAACAACCGACGCCAGGCATCCAGGCGAAGATGACACCGGTACCGGATTGCGGCGAGAAAACCTATGTTGGTAGCGGTCGCCTGAAAGATCGTAAAGCACTGGTGACAGGGGGCGATTCCGGAATAGGTCGCGCTGCCGCCATCGCTTACGCGCGTGAAGGGGCTGACGTGGCGATCAGTTATCTTCCCGTGGAAGAAGAAGACGCTCAGGATGTGAAAAAGATCATTGAAGAATGCGGACGCAAAGCCGTTCTGCTGCCAGGCGATTTAAGCGATGAGAAATTTGCCCGTTCGCTGGTTCACGAAGCGCACAAGGCGTTAGGCGGGCTGGATATTATGGCGCTGGTCGCCGGGAAACAGGTTGCCATTCCGGATATTGCAGACCTCACCAGCGAACAGTTTCAAAAGACCTTTGCCATTAACGTTTTCGCGCTGTTCTGGCTAACCCAGGAAGCGATCCCCCTGCTACCGAAAGGTGCAAGTATCATCACCACTTCGTCAATCCAGGCATACCAGCCAAGTCCGCATTTACTGGACTATGCGGCTACGAAGGCGGCGATTCTGAACTACAGCCGTGGCTTGGCAAAACAGGTCGCGGAGAAAGGTATTCGGGTGAATATTGTCGCGCCAGGCCCGATCTGGACAGCACTGCAAATTTCCGGCGGACAAACGCAGGATAAGATCCCGCAGTTTGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAA", + "dna_sequence_length": 885, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2956", + "location": [ + [ + "NC_000913", + 3149662, + "+", + 885 + ] + ], + "md5": "10bdde94623f0926d1e335eecad430a9", + "parent_gene": "", + "protein_md5": "71b366fee434d27c10f65222f4cb5ea6", + "protein_translation": "MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009866" + ], + [ + "gene_synonym", + "ECK2998" + ], + [ + "gene_synonym", + "EcoGene:EG10272" + ], + [ + "gene_synonym", + "GI:16130903" + ], + [ + "gene_synonym", + "GeneID:946345" + ], + [ + "gene_synonym", + "JW2973" + ], + [ + "gene_synonym", + "NP_417478.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABV2" + ], + [ + "gene_synonym", + "b3005" + ], + [ + "gene_synonym", + "exbD" + ] + ], + "dna_sequence": "ATGGCAATGCATCTTAACGAAAACCTCGACGATAACGGCGAAATGCATGATATCAACGTGACGCCGTTTATCGACGTGATGTTGGTTCTGCTGATTATCTTTATGGTGGCGGCACCGTTAGCGACGGTAGATGTGAAGGTGAACTTGCCTGCTTCTACCAGCACGCCGCAGCCGCGCCCGGAAAAACCGGTTTATCTGTCGGTGAAGGCAGACAACTCGATGTTTATCGGTAACGATCCGGTCACCGATGAAACAATGATTACGGCGTTGAATGCGTTAACCGAAGGCAAGAAAGACACCACCATCTTCTTCCGAGCGGACAAAACCGTCGATTACGAGACGTTGATGAAGGTAATGGATACGCTGCATCAGGCGGGTTACCTGAAGATAGGTCTGGTCGGCGAAGAAACCGCCAAAGCGAAGTAA", + "dna_sequence_length": 426, + "functions": [ + "membrane spanning protein in TonB-ExbB-ExbD complex" + ], + "id": "CDS_2957", + "location": [ + [ + "NC_000913", + 3151243, + "-", + 426 + ] + ], + "md5": "2faa697807e663612135066223c04abe", + "parent_gene": "", + "protein_md5": "01253ca20e74209bc3ba1c7febf7acff", + "protein_translation": "MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009869" + ], + [ + "gene_synonym", + "ECK2999" + ], + [ + "gene_synonym", + "EcoGene:EG10271" + ], + [ + "gene_synonym", + "GI:16130904" + ], + [ + "gene_synonym", + "GeneID:945420" + ], + [ + "gene_synonym", + "JW2974" + ], + [ + "gene_synonym", + "NP_417479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU7" + ], + [ + "gene_synonym", + "b3006" + ], + [ + "gene_synonym", + "exbB" + ] + ], + "dna_sequence": "GTGGGTAATAATTTAATGCAGACGGACCTTTCCGTCTGGGGTATGTATCAGCACGCCGATATTGTCGTTAAGTGCGTGATGATTGGGCTTATTTTGGCCTCCGTAGTCACCTGGGCAATCTTCTTCAGTAAGAGCGTAGAGTTCTTCAATCAGAAGCGTCGCCTTAAGCGCGAGCAGCAACTGCTGGCTGAAGCGCGTTCCTTAAACCAGGCCAACGATATCGCCGCTGATTTTGGTAGCAAAAGCTTAAGCCTGCATTTGCTCAATGAAGCGCAGAATGAGCTGGAACTGTCAGAAGGCAGCGACGATAACGAAGGTATTAAAGAACGTACCAGCTTCCGTCTGGAGCGTCGGGTCGCCGCAGTGGGTCGTCAAATGGGCCGCGGTAACGGCTATCTGGCAACCATCGGCGCGATTTCTCCGTTCGTTGGTCTGTTTGGTACGGTCTGGGGCATCATGAACAGCTTTATTGGTATCGCGCAAACGCAGACCACTAACCTGGCAGTCGTTGCGCCGGGTATCGCAGAAGCTCTGTTAGCAACGGCAATCGGCCTCGTGGCAGCGATTCCTGCGGTCGTTATCTATAACGTATTTGCACGCCAGATTGGCGGCTTTAAAGCGATGCTGGGTGATGTTGCAGCGCAGGTATTGTTGCTGCAAAGCCGTGACCTGGATCTGGAAGCCAGCGCCGCTGCGCATCCGGTTCGTGTCGCACAAAAATTACGCGCAGGATAA", + "dna_sequence_length": 735, + "functions": [ + "membrane spanning protein in TonB-ExbB-ExbD complex" + ], + "id": "CDS_2958", + "location": [ + [ + "NC_000913", + 3151984, + "-", + 735 + ] + ], + "md5": "bfe6dd210a428b6246115546c28f75ae", + "parent_gene": "", + "protein_md5": "8e9df694c4e104f46a6afb719b1b8b13", + "protein_translation": "MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009878" + ], + [ + "gene_synonym", + "ECK3000" + ], + [ + "gene_synonym", + "EcoGene:EG10583" + ], + [ + "gene_synonym", + "GI:16130906" + ], + [ + "gene_synonym", + "GeneID:946240" + ], + [ + "gene_synonym", + "JW2975" + ], + [ + "gene_synonym", + "NP_417481.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06721" + ], + [ + "gene_synonym", + "b3008" + ], + [ + "gene_synonym", + "metC" + ] + ], + "dna_sequence": "ATGGCGGACAAAAAGCTTGATACTCAACTGGTGAATGCAGGACGCAGCAAAAAATACACTCTCGGCGCGGTAAATAGCGTGATTCAGCGCGCTTCTTCGCTGGTCTTTGACAGTGTAGAAGCCAAAAAACACGCGACACGTAATCGCGCCAATGGAGAGTTGTTCTATGGACGGCGCGGAACGTTAACCCATTTCTCCTTACAACAAGCGATGTGTGAACTGGAAGGTGGCGCAGGCTGCGTGCTATTTCCCTGCGGGGCGGCAGCGGTTGCTAATTCCATTCTTGCTTTTATCGAACAGGGCGATCATGTGTTGATGACCAACACCGCCTATGAACCGAGTCAGGATTTCTGTAGCAAAATCCTCAGCAAACTGGGCGTAACGACATCATGGTTTGATCCGCTGATTGGTGCCGATATCGTTAAGCATCTGCAGCCAAACACTAAAATCGTGTTTCTGGAATCGCCAGGCTCCATCACCATGGAAGTCCACGACGTTCCGGCGATTGTTGCCGCCGTACGCAGTGTGGTGCCGGATGCCATCATTATGATCGACAACACCTGGGCAGCCGGTGTGCTGTTTAAGGCGCTGGATTTTGGCATCGATGTTTCTATTCAAGCCGCCACCAAATATCTGGTTGGGCATTCAGATGCGATGATTGGCACTGCCGTGTGCAATGCCCGTTGCTGGGAGCAGCTACGGGAAAATGCCTATCTGATGGGCCAGATGGTCGATGCCGATACCGCCTATATAACCAGCCGTGGCCTGCGCACATTAGGTGTGCGTTTGCGTCAACATCATGAAAGCAGTCTGAAAGTGGCTGAATGGCTGGCAGAACATCCGCAAGTTGCGCGAGTTAACCACCCTGCTCTGCCTGGCAGTAAAGGTCACGAATTCTGGAAACGAGACTTTACAGGCAGCAGCGGGCTATTTTCCTTTGTGCTTAAGAAAAAACTCAATAATGAAGAGCTGGCGAACTATCTGGATAACTTCAGTTTATTCAGCATGGCCTACTCGTGGGGCGGGTATGAATCGTTGATCCTGGCAAATCAACCAGAACATATCGCCGCCATTCGCCCACAAGGCGAGATCGATTTTAGCGGGACCTTGATTCGCCTGCATATTGGTCTGGAAGATGTCGACGATCTGATTGCCGATCTGGACGCCGGTTTTGCGCGAATTGTATAA", + "dna_sequence_length": 1188, + "functions": [ + "cystathionine beta-lyase, PLP-dependent" + ], + "id": "CDS_2959", + "location": [ + [ + "NC_000913", + 3152236, + "+", + 1188 + ] + ], + "md5": "ac76fbf92c0eeb818366c10e94674d65", + "parent_gene": "", + "protein_md5": "ab97702bee3d0ed01df83c80c1f43722", + "protein_translation": "MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV", + "protein_translation_length": 395, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009882" + ], + [ + "gene_synonym", + "ECK3001" + ], + [ + "gene_synonym", + "EcoGene:EG11824" + ], + [ + "gene_synonym", + "GI:16130907" + ], + [ + "gene_synonym", + "GeneID:947490" + ], + [ + "gene_synonym", + "JW2976" + ], + [ + "gene_synonym", + "NP_417482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA60" + ], + [ + "gene_synonym", + "b3009" + ], + [ + "gene_synonym", + "yghB" + ] + ], + "dna_sequence": "ATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCATATTGTTAGCGTTGTTTACTTTGTCATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGA", + "dna_sequence_length": 660, + "functions": [ + "general envelope maintenance protein", + "DedA family inner membrane protein", + "putative multidrug efflux transporter" + ], + "id": "CDS_2960", + "location": [ + [ + "NC_000913", + 3153563, + "+", + 660 + ] + ], + "md5": "67608b3f6286d28d065ffe372264d69f", + "parent_gene": "", + "protein_md5": "41cd95fed8352133b976830ca3ed6a6f", + "protein_translation": "MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009884" + ], + [ + "gene_synonym", + "ECK3002" + ], + [ + "gene_synonym", + "EcoGene:EG13013" + ], + [ + "gene_synonym", + "GI:90111526" + ], + [ + "gene_synonym", + "GeneID:947491" + ], + [ + "gene_synonym", + "JW5849" + ], + [ + "gene_synonym", + "NP_417483.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46855" + ], + [ + "gene_synonym", + "b3010" + ], + [ + "gene_synonym", + "yqhC" + ] + ], + "dna_sequence": "ATGCTACAAAATTGCGCACAATCAAATTGCCGCATTATTCCTAAGAAATTACGCGATATGAAACGTGAAGAGATTTGCCGCTTGCTGGCGGATAAAGTTAATAAACTGAAAAATAAAGAAAATAGTTTGTCAGGACTGTTGCCCGATGTGCGTTTGTTGTATGGCGAGACGCCTTTCGCACGTACACCGGTGATGTACGAGCCTGGCATCATAATTCTCTTTTCCGGGCATAAAATCGGTTATATCAATGAACGCGTGTTTCGTTATGATGCCAATGAATACCTGCTGCTGACGGTGCCGTTGCCGTTTGAGTGCGAAACCTATGCCACGTCAGAGGTGCCGCTGGCAGGGTTGCGTCTCAATGTCGATATTTTGCAGTTACAGGAACTGTTGATGGACATTGGCGAAGATGAGCATTTCCAGCCGTCGATGGCAGCCAGCGGGATTAACTCCGCCACGTTATCAGAAGAGATTTTATGCGCGGCGGAGCGGTTACTCGACGTGATGGAGCGACCACTGGATGCGCGTATTCTCGGCAAACAGATCATCCGCGAAATTCTGTACTACGTGCTGACCGGACCTTGCGGCGGCGCGTTACTGGCGCTGGTCAGTCGCCAGACTCACTTCAGTCTGATTAGCCGCGTGCTGAAACGGATTGAGAATAAATACACCGAAAACCTGAGCGTCGAGCAACTGGCGGCAGAAGCCAACATGAGCGTATCGGCGTTCCACCATAATTTTAAGTCTGTCACCAGTACCTCGCCGTTGCAGTATTTGAAGAATTACCGTCTGCATAAGGCGCGGATGATGATCATCCATGACGGCATGAAGGCCAGCGCAGCAGCGATGCGCGTCGGCTATGAAAGCGCATCGCAATTTAGCCGTGAGTTTAAACGTTACTTCGGTGTGACGCCGGGGGAAGATGCGGCAAGAATGCGGGCGATGCAGGGGAATTAA", + "dna_sequence_length": 957, + "functions": [ + "transcriptional activator of yqhD" + ], + "id": "CDS_2961", + "location": [ + [ + "NC_000913", + 3155218, + "-", + 957 + ] + ], + "md5": "d382f759cfa32e94fee7d44f4d1468a6", + "parent_gene": "", + "protein_md5": "fcd53c1460f4e972a7d8d89e497e80d3", + "protein_translation": "MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009888" + ], + [ + "gene_synonym", + "ECK3003" + ], + [ + "gene_synonym", + "EcoGene:EG13014" + ], + [ + "gene_synonym", + "GI:16130909" + ], + [ + "gene_synonym", + "GeneID:947493" + ], + [ + "gene_synonym", + "JW2978" + ], + [ + "gene_synonym", + "NP_417484.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46856" + ], + [ + "gene_synonym", + "b3011" + ], + [ + "gene_synonym", + "yqhD" + ] + ], + "dna_sequence": "ATGAACAACTTTAATCTGCACACCCCAACCCGCATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCAAACCCGGCTTATGAAACGCTGATGAACGCCGTGAAACTGGTTCGCGAACAGAAAGTGACTTTCCTGCTGGCGGTTGGCGGCGGTTCTGTACTGGACGGCACCAAATTTATCGCCGCAGCGGCTAACTATCCGGAAAATATCGATCCGTGGCACATTCTGCAAACGGGCGGTAAAGAGATTAAAAGCGCCATCCCGATGGGCTGTGTGCTGACGCTGCCAGCAACCGGTTCAGAATCCAACGCAGGCGCGGTGATCTCCCGTAAAACCACAGGCGACAAGCAGGCGTTCCATTCTGCCCATGTTCAGCCGGTATTTGCCGTGCTCGATCCGGTTTATACCTACACCCTGCCGCCGCGTCAGGTGGCTAACGGCGTAGTGGACGCCTTTGTACACACCGTGGAACAGTATGTTACCAAACCGGTTGATGCCAAAATTCAGGACCGTTTCGCAGAAGGCATTTTGCTGACGCTAATCGAAGATGGTCCGAAAGCCCTGAAAGAGCCAGAAAACTACGATGTGCGCGCCAACGTCATGTGGGCGGCGACTCAGGCGCTGAACGGTTTGATTGGCGCTGGCGTACCGCAGGACTGGGCAACGCATATGCTGGGCCACGAACTGACTGCGATGCACGGTCTGGATCACGCGCAAACACTGGCTATCGTCCTGCCTGCACTGTGGAATGAAAAACGCGATACCAAGCGCGCTAAGCTGCTGCAATATGCTGAACGCGTCTGGAACATCACTGAAGGTTCCGATGATGAGCGTATTGACGCCGCGATTGCCGCAACCCGCAATTTCTTTGAGCAATTAGGCGTGCCGACCCACCTCTCCGACTACGGTCTGGACGGCAGCTCCATCCCGGCTTTGCTGAAAAAACTGGAAGAGCACGGCATGACCCAACTGGGCGAAAATCATGACATTACGTTGGATGTCAGCCGCCGTATATACGAAGCCGCCCGCTAA", + "dna_sequence_length": 1164, + "functions": [ + "aldehyde reductase, NADPH-dependent" + ], + "id": "CDS_2962", + "location": [ + [ + "NC_000913", + 3155355, + "+", + 1164 + ] + ], + "md5": "b694e4858a2e7bd77e43229920e1354f", + "parent_gene": "", + "protein_md5": "d24c523a8ef4db91a35a85a55ac2da72", + "protein_translation": "MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAEGILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009892" + ], + [ + "gene_synonym", + "ECK3004" + ], + [ + "gene_synonym", + "EcoGene:EG13015" + ], + [ + "gene_synonym", + "GI:90111527" + ], + [ + "gene_synonym", + "GeneID:947495" + ], + [ + "gene_synonym", + "JW5499" + ], + [ + "gene_synonym", + "NP_417485.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46857" + ], + [ + "gene_synonym", + "b3012" + ], + [ + "gene_synonym", + "dkgA" + ], + [ + "gene_synonym", + "yqhE" + ] + ], + "dna_sequence": "ATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTGGCAAGCAAGTAATGAGGAAGTAATCACCGCCATTCAAAAAGCGTTAGAAGTGGGTTATCGCTCGATTGATACCGCCGCGGCCTACAAGAACGAAGAAGGTGTCGGCAAAGCCCTGAAAAATGCCTCAGTCAACAGAGAAGAACTGTTCATCACCACTAAGCTGTGGAACGACGACCACAAGCGCCCCCGCGAAGCCCTGCTCGACAGCCTGAAAAAACTCCAGCTTGATTATATCGACCTCTACTTAATGCACTGGCCCGTTCCCGCTATCGACCATTATGTCGAAGCATGGAAAGGCATGATCGAATTGCAAAAAGAGGGATTAATCAAAAGCATCGGCGTGTGCAACTTCCAGATCCATCACCTGCAACGCCTGATTGATGAAACTGGCGTGACGCCTGTGATAAACCAGATCGAACTTCATCCGCTGATGCAACAACGCCAGCTACACGCCTGGAACGCGACACACAAAATCCAGACCGAATCCTGGAGCCCATTAGCGCAAGGAGGGAAAGGCGTTTTCGATCAGAAAGTCATTCGCGATCTGGCAGATAAATACGGCAAAACCCCGGCGCAGATTGTTATCCGCTGGCATCTGGATAGCGGCCTGGTGGTGATCCCGAAATCGGTCACACCTTCACGTATTGCCGAAAACTTTGATGTCTGGGATTTCCGTCTCGACAAAGACGAACTCGGCGAAATTGCAAAACTCGATCAGGGCAAGCGTCTCGGTCCCGATCCTGACCAGTTCGGCGGCTAA", + "dna_sequence_length": 828, + "functions": [ + "2,5-diketo-D-gluconate reductase A" + ], + "id": "CDS_2963", + "location": [ + [ + "NC_000913", + 3156623, + "+", + 828 + ] + ], + "md5": "0baba97d10f391649d1c88eef337cf00", + "parent_gene": "", + "protein_md5": "88e41fc450178b85b56d7a3a9feda349", + "protein_translation": "MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009895" + ], + [ + "gene_synonym", + "ECK3005" + ], + [ + "gene_synonym", + "EcoGene:EG13017" + ], + [ + "gene_synonym", + "GI:49176301" + ], + [ + "gene_synonym", + "GeneID:945919" + ], + [ + "gene_synonym", + "JW5500" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46858" + ], + [ + "gene_synonym", + "YP_026195.1" + ], + [ + "gene_synonym", + "b3013" + ], + [ + "gene_synonym", + "yqhF" + ], + [ + "gene_synonym", + "yqhG" + ] + ], + "dna_sequence": "ATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGATTGTCAGGATTTTGGCGATCTGGTGCTAGAAAGCGTTGCGATAACCCAAACTGACGCCGATCATGCCGATGCCGTTGTGCGCTTTCGTATCTTTAAAGATGATAAAGAAAAGACCACGCAGACACTGAAAATGGTGGCGGAAAATGGTCGTTGGGTCATTGACGATATTGTCAGCAATCATGGCAGCGTCTTACAAGCAGTTAATAGCGAGAATGAAAAAACGCTGGCCGCTTTAGCTTCGTTGCAAAAAGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATCCGATCTGTTTTGGCGAAGAGTCGCTATTTTCACGCGTTGATGAAATTCGAGTCCTGGAGAAAACCGCCGATTCCGCCCGCATTCATGTTCGTTTTACGCTGACCAATGGCAACAACGAAGAGCAAGAACTGGTTTTACAGCGGCGCGAAGGCAAGTGGGAAATCGCTGATTTTATCCGCCCGAACAGCGGCAGCCTACTTAAGCAGATTGAGGCAAAAACTGCCGCCAGATTAAAGCAATGA", + "dna_sequence_length": 927, + "functions": [ + "DUF3828 family putative periplasmic protein" + ], + "id": "CDS_2964", + "location": [ + [ + "NC_000913", + 3157650, + "+", + 927 + ] + ], + "md5": "bfbedb6e8549f495010f9994dba893f4", + "parent_gene": "", + "protein_md5": "a7b3522afc4276875720fab056a8b64b", + "protein_translation": "MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLAALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQRREGKWEIADFIRPNSGSLLKQIEAKTAARLKQ", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009898" + ], + [ + "gene_synonym", + "ECK3006" + ], + [ + "gene_synonym", + "EcoGene:EG13018" + ], + [ + "gene_synonym", + "GI:16130912" + ], + [ + "gene_synonym", + "GeneID:946832" + ], + [ + "gene_synonym", + "JW2982" + ], + [ + "gene_synonym", + "NP_417487.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65298" + ], + [ + "gene_synonym", + "b3014" + ], + [ + "gene_synonym", + "yqhH" + ] + ], + "dna_sequence": "ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCTTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAATCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGA", + "dna_sequence_length": 258, + "functions": [ + "outer membrane lipoprotein, Lpp paralog" + ], + "id": "CDS_2965", + "location": [ + [ + "NC_000913", + 3158627, + "+", + 258 + ] + ], + "md5": "429a63b3b6a3bad3b0645062384ba0b7", + "parent_gene": "", + "protein_md5": "6785684b497f6352952536f341ce094f", + "protein_translation": "MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174099" + ], + [ + "gene_synonym", + "ECK3007" + ], + [ + "gene_synonym", + "EcoGene:EG13019" + ], + [ + "gene_synonym", + "GI:49176302" + ], + [ + "gene_synonym", + "GeneID:948963" + ], + [ + "gene_synonym", + "JW5501" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46861" + ], + [ + "gene_synonym", + "YP_026196.1" + ], + [ + "gene_synonym", + "b4469" + ], + [ + "gene_synonym", + "ygiQ" + ], + [ + "gene_synonym", + "ygiR" + ] + ], + "dna_sequence": "ATGAGCTCTATCTCCCTGATCCAACCGGATCGCGACCTGTTCTCCTGGCCGCAGTACTGGGCCGCCTGTTTTGGACCGGCACCGTTTTTGCCGATGTCTCGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATCATTTTGGTTACTGGCGACGCGTATGTCGATCACCCAAGCTTCGGGATGGCGATTTGCGGTCGTATGCTGGAAGCGCAGGGCTTTCGCGTCGGGATCATCGCCCAGCCGGACTGGAGCAGCAAAGACGACTTTATGCGTCTGGGTAAACCGAATCTGTTTTTCGGTGTTACTGCTGGCAACATGGATTCGATGATCAACCGTTATACCGCCGATCGCCGTTTACGTCATGACGATGCCTACACGCCGGATAACGTCGCGGGTAAGCGCCCGGATCGCGCCACACTGGTTTATACCCAGCGTTGTAAAGAGGCGTGGAAAGATGTACCGGTGATCCTCGGCGGTATTGAGGCTAGTCTGCGCCGTACCGCGCATTATGATTACTGGTCCGATACCGTGCGCCGTTCCGTGCTGGTGGATTCGAAAGCCGACATGCTGATGTTTGGTAACGGTGAGCGTCCGCTGGTGGAAGTGGCGCATCGTCTGGCGATGGGCGAGCCAATTAGTGAAATCCGCGATGTGCGTAATACCGCGATTATCGTGAAAGAGGCGCTGCCTGGCTGGAGCGGCGTGGATTCCACCCGTCTTGATACCCCTGGAAAAATCGACCCAATCCCGCATCCGTATGGTGAAGATTTGCCGTGCGCGGATAACAAACCGGTGGCACCGAAAAAGCAGGAAGCCAAAGCCGTAACCGTGCAGCCACCGCGCCCGAAACCGTGGGAAAAAACCTACGTGTTGCTGCCTTCTTTCGAGAAAGTGAAGGGCGATAAAGTGCTGTACGCCCATGCTTCGCGTATTCTGCACCACGAAACCAACCCAGGCTGTGCCCGCGCATTGATGCAAAAACACGGCGACCGCTATGTGTGGATCAACCCGCCTGCTATTCCGCTTTCTACCGAAGAGATGGACAGCGTTTTTGCGCTGCCATACAAGCGCGTGCCACATCCGGCCTATGGCAATGCCCGTATTCCGGCTTACGAAATGATCCGTTTTTCGGTCAACATTATGCGTGGCTGCTTTGGCGGCTGCTCTTTCTGTTCTATCACCGAGCACGAAGGGCGCATTATTCAGAGCCGTTCCGAAGATTCGATCATTAATGAGATCGAAGCGATCCGCGACACCGTTCCAGGTTTTACGGGCGTGATTTCCGATCTTGGTGGGCCAACTGCCAACATGTATATGTTGCGCTGCAAATCGCCACGCGCTGAACAAACTTGTCGCCGTTTGTCGTGCGTTTATCCGGATATTTGTCCGCACATGGACACGAACCACGAACCAACGATCAACCTCTATCGCCGTGCGCGTGATCTGAAAGGCATTAAAAAGATCCTGATTGCCTCTGGTGTGCGTTATGACATAGCCGTAGAAGATCCGCGCTATATCAAAGAACTGGCGACCCATCACGTCGGCGGTTATCTGAAGATTGCCCCGGAACATACCGAAGAAGGGCCGTTATCGAAGATGATGAAGCCGGGCATGGGCAGCTATGACCGCTTTAAAGAGCTGTTCGATACTTACTCAAAACAGGCAGGTAAAGAGCAGTATCTGATCCCCTATTTCATCTCCGCGCACCCCGGTACGCGTGATGAAGATATGGTGAATCTGGCGCTGTGGCTGAAAAAGCACCGCTTCCGCCTCGACCAGGTGCAGAACTTCTATCCGTCGCCGCTGGCGAACTCAACCACCATGTATTACACCGGGAAAAACCCGCTGGCGAAGATTGGTTATAAGAGCGAAGACGTCTTCGTACCGAAGGGCGACAAACAGCGTCGTTTGCATAAAGCGTTGTTGCGTTACCACGATCCGGCAAACTGGCCGTTAATCCGCCAGGCGCTGGAAGCGATGGGCAAAAAGCATCTGATTGGCAGCCGTCGCGATTGCTTAGTGCCTGCGCCAACCATTGAAGAGATGCGTGAAGCTCGTCGCCAGAACCGCAATACCCGTCCGGCGTTGACGAAACATACGCCGATGGCGACCCAGCGTCAGACGCCTGCTACGGCAAAAAAAGCGTCGTCTACGCAATCTCGTCCGGTGAATGCTGGTGCGAAGAAACGGCCTAAAGCGGCGGTTGGACGTTAA", + "dna_sequence_length": 2220, + "functions": [ + "Radical SAM superfamily protein" + ], + "id": "CDS_2966", + "location": [ + [ + "NC_000913", + 3161146, + "-", + 2220 + ] + ], + "md5": "d773656dc7ff4afa309614c0f09f466a", + "parent_gene": "", + "protein_md5": "d3bef5dc5d72fe9c310c111d7432b379", + "protein_translation": "MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR", + "protein_translation_length": 739, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009905" + ], + [ + "gene_synonym", + "ECK3008" + ], + [ + "gene_synonym", + "EcoGene:EG11376" + ], + [ + "gene_synonym", + "GI:16130913" + ], + [ + "gene_synonym", + "GeneID:944982" + ], + [ + "gene_synonym", + "JW2985" + ], + [ + "gene_synonym", + "NP_417489.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26648" + ], + [ + "gene_synonym", + "b3017" + ], + [ + "gene_synonym", + "ftsP" + ], + [ + "gene_synonym", + "sufI" + ], + [ + "gene_synonym", + "sui" + ], + [ + "gene_synonym", + "ygiJ" + ] + ], + "dna_sequence": "ATGTCACTCAGTCGGCGTCAGTTCATTCAGGCATCGGGGATTGCACTTTGTGCAGGCGCTGTTCCCCTGAAGGCCAGCGCAGCCGGGCAACAGCAACCGCTACCCGTTCCGCCGCTACTTGAATCTCGCCGTGGGCAACCGCTGTTTATGACTGTACAACGTGCGCACTGGTCATTTACGCCAGGGACACGCGCGTCGGTCTGGGGAATCAATGGTCGTTACCTGGGGCCGACTATCCGCGTCTGGAAGGGCGACGATGTTAAGCTTATTTACAGCAACCGCCTGACAGAAAATGTCTCAATGACGGTGGCCGGGCTACAGGTACCAGGCCCGCTGATGGGCGGTCCGGCACGGATGATGTCGCCAAACGCTGACTGGGCACCCGTACTGCCCATTCGCCAGAACGCAGCTACTCTGTGGTATCACGCCAATACTCCCAACCGCACGGCTCAGCAGGTCTATAACGGCCTTGCCGGAATGTGGCTGGTGGAAGATGAAGTCAGCAAGTCGCTGCCTATCCCCAACCATTATGGTGTGGATGATTTTCCGGTCATTATCCAGGATAAACGGCTGGATAACTTTGGTACGCCAGAATACAACGAACCGGGAAGCGGCGGCTTTGTTGGTGATACGCTGCTGGTTAACGGTGTACAAAGCCCGTACGTTGAAGTCTCGCGTGGCTGGGTGCGCTTGCGACTGCTGAACGCGTCGAACTCTCGTCGCTATCAACTACAGATGAACGATGGTCGCCCGTTACATGTGATTTCTGGCGATCAGGGATTCCTGCCTGCTCCTGTATCGGTGAAGCAACTTTCGCTGGCACCGGGCGAGCGCCGCGAGATTCTGGTGGATATGAGCAACGGCGATGAAGTGTCGATCACCTGTGGCGAAGCGGCGAGCATTGTTGATCGTATTCGTGGCTTCTTTGAGCCATCCAGTATTCTGGTTTCTACCCTGGTGCTAACGCTGCGCCCAACCGGCCTTCTGCCGCTGGTCACAGACAGTCTTCCGATGCGCTTGCTGCCAACTGAAATCATGGCTGGTTCGCCAATTCGCAGTCGCGATATCAGTCTGGGTGATGACCCGGGTATTAATGGACAGCTGTGGGACGTCAACCGTATTGATGTCACCGCGCAGCAAGGAACGTGGGAACGCTGGACGGTACGCGCGGACGAGCCGCAAGCGTTCCATATTGAAGGCGTAATGTTCCAGATCCGTAACGTGAATGGCGCGATGCCGTTCCCGGAAGACAGAGGCTGGAAAGATACCGTTTGGGTTGACGGACAAGTGGAGCTGCTTGTTTATTTCGGTCAGCCTTCCTGGGCGCACTTCCCGTTCTACTTCAACAGTCAGACGCTGGAAATGGCGGACCGTGGCTCGATTGGGCAACTGTTGGTCAATCCGGTACCGTAA", + "dna_sequence_length": 1413, + "functions": [ + "septal ring component that protects the divisome from stress", + "multicopy suppressor of ftsI(Ts)" + ], + "id": "CDS_2967", + "location": [ + [ + "NC_000913", + 3162669, + "-", + 1413 + ] + ], + "md5": "9303087a1e571b8b053119eb930530a2", + "parent_gene": "", + "protein_md5": "b1cbeba5d0a5c242fd072b71b7f6541a", + "protein_translation": "MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009910" + ], + [ + "gene_synonym", + "ECK3009" + ], + [ + "gene_synonym", + "EcoGene:EG11377" + ], + [ + "gene_synonym", + "GI:16130914" + ], + [ + "gene_synonym", + "GeneID:947496" + ], + [ + "gene_synonym", + "JW2986" + ], + [ + "gene_synonym", + "NP_417490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26647" + ], + [ + "gene_synonym", + "b3018" + ], + [ + "gene_synonym", + "parF" + ], + [ + "gene_synonym", + "plsC" + ] + ], + "dna_sequence": "ATGCTATATATCTTTCGTCTTATTATTACCGTGATTTACAGCATCTTAGTCTGTGTATTCGGCTCCATTTACTGCCTTTTCAGCCCGCGTAACCCGAAACATGTGGCCACCTTTGGGCATATGTTTGGCCGTCTTGCGCCGCTGTTTGGCCTGAAAGTTGAGTGCCGTAAACCTACAGACGCTGAAAGCTACGGCAATGCTATCTATATCGCTAACCACCAGAACAACTATGACATGGTGACAGCATCGAACATCGTGCAACCGCCGACGGTGACGGTAGGTAAAAAGAGCTTGCTGTGGATCCCCTTCTTCGGGCAGTTGTACTGGTTAACCGGCAACTTATTGATCGACAGAAACAATCGCACTAAAGCTCACGGCACCATTGCGGAAGTAGTGAATCACTTCAAAAAACGCCGTATTTCCATCTGGATGTTCCCGGAAGGAACCCGCAGCCGTGGTCGCGGCCTGCTACCGTTCAAGACTGGAGCATTTCACGCGGCAATTGCGGCGGGCGTCCCGATTATTCCCGTGTGCGTCTCTACAACTTCGAATAAGATTAATCTTAATCGACTGCACAACGGTCTGGTGATTGTCGAAATGCTGCCGCCAATTGACGTCAGTCAGTATGGCAAAGATCAGGTTCGTGAGCTGGCTGCCCATTGTCGTTCGATAATGGAACAAAAAATCGCCGAGCTCGATAAAGAAGTCGCAGAACGCGAAGCCGCCGGAAAAGTTTAA", + "dna_sequence_length": 738, + "functions": [ + "1-acyl-sn-glycerol-3-phosphate acyltransferase" + ], + "id": "CDS_2968", + "location": [ + [ + "NC_000913", + 3163481, + "-", + 738 + ] + ], + "md5": "0b5df7fe8d13a11258ae57d3076db966", + "parent_gene": "", + "protein_md5": "aa7c0905c8694c90f6e72488c504e003", + "protein_translation": "MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009916" + ], + [ + "gene_synonym", + "ECK3010" + ], + [ + "gene_synonym", + "EcoGene:EG10686" + ], + [ + "gene_synonym", + "GI:16130915" + ], + [ + "gene_synonym", + "GeneID:947499" + ], + [ + "gene_synonym", + "JW2987" + ], + [ + "gene_synonym", + "NP_417491.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI2" + ], + [ + "gene_synonym", + "b3019" + ], + [ + "gene_synonym", + "parC" + ] + ], + "dna_sequence": "ATGAGCGATATGGCAGAGCGCCTTGCGCTACATGAATTTACGGAAAACGCCTACTTAAACTACTCCATGTACGTGATCATGGACCGTGCGTTGCCGTTTATTGGTGATGGTCTGAAACCTGTTCAGCGCCGCATTGTGTATGCGATGTCTGAACTGGGCCTGAATGCCAGCGCCAAATTTAAAAAATCGGCCCGTACCGTCGGTGACGTACTGGGTAAATACCATCCGCACGGCGATAGCGCCTGTTATGAAGCGATGGTCCTGATGGCGCAACCGTTCTCTTACCGTTATCCGCTGGTTGATGGTCAGGGGAACTGGGGCGCGCCGGACGATCCGAAATCGTTCGCGGCAATGCGTTACACCGAATCCCGGTTGTCGAAATATTCCGAGCTGCTATTGAGCGAGCTGGGGCAGGGGACGGCTGACTGGGTGCCAAACTTCGACGGCACTTTGCAGGAGCCGAAAATGCTACCTGCCCGTCTGCCAAACATTTTGCTTAACGGCACCACCGGTATTGCCGTCGGCATGGCGACCGATATTCCACCGCATAACCTGCGTGAAGTGGCTCAGGCGGCAATCGCATTAATCGACCAGCCGAAAACCACGCTCGATCAGCTGCTGGATATCGTGCAGGGGCCGGATTATCCGACTGAAGCGGAAATTATCACTTCGCGCGCCGAGATCCGTAAAATCTACGAGAACGGACGTGGTTCAGTGCGTATGCGCGCGGTGTGGAAGAAAGAAGATGGCGCGGTGGTTATCAGCGCATTGCCGCATCAGGTTTCAGGTGCGCGCGTACTGGAGCAAATTGCTGCGCAAATGCGCAACAAAAAGCTGCCGATGGTTGACGATCTGCGCGATGAATCTGACCACGAGAACCCGACCCGCCTGGTGATTGTGCCGCGTTCCAACCGCGTGGATATGGATCAGGTGATGAACCACCTCTTCGCTACCACCGATCTGGAAAAGAGCTATCGTATTAACCTTAATATGATCGGTCTGGATGGTCGTCCGGCGGTGAAAAACCTGCTGGAAATCCTCTCCGAATGGCTGGTGTTCCGCCGCGATACCGTGCGCCGCCGACTGAACTATCGTCTGGAGAAAGTCCTCAAGCGCCTGCATATCCTCGAAGGTTTGCTGGTGGCGTTTCTCAATATCGACGAAGTGATTGAGATCATTCGTAATGAAGATGAACCGAAACCGGCGCTGATGTCGCGGTTTGGCCTTACGGAAACCCAGGCGGAAGCGATCCTCGAACTGAAACTGCGTCATCTTGCCAAACTGGAAGAGATGAAGATTCGCGGTGAGCAGAGTGAACTGGAAAAAGAGCGCGACCAGTTGCAGGGCATTTTGGCTTCCGAGCGTAAAATGAATAACCTGCTGAAGAAAGAACTGCAGGCAGACGCGCAAGCCTACGGTGACGATCGTCGTTCGCCGTTGCAGGAACGCGAAGAAGCGAAAGCGATGAGCGAGCACGACATGCTGCCGTCTGAACCTGTCACCATTGTGCTGTCGCAGATGGGCTGGGTACGCAGCGCTAAAGGCCATGATATCGACGCGCCGGGCCTGAATTATAAAGCGGGTGATAGCTTCAAAGCGGCGGTGAAAGGTAAGAGCAACCAACCGGTAGTGTTTGTTGATTCCACCGGTCGTAGCTATGCCATTGACCCGATTACGCTGCCGTCGGCGCGTGGTCAGGGCGAGCCGCTCACCGGCAAATTAACGTTGCCGCCTGGGGCGACCGTTGACCATATGCTGATGGAAAGCGACGATCAGAAACTGCTGATGGCTTCCGATGCGGGTTACGGTTTCGTCTGCACCTTTAACGATCTGGTGGCGCGTAACCGTGCAGGTAAGGCTTTGATCACCTTACCGGAAAATGCCCATGTTATGCCGCCGGTGGTGATTGAAGATGCTTCCGATATGCTGCTGGCAATCACTCAGGCAGGCCGTATGTTGATGTTCCCGGTAAGTGATCTGCCGCAGCTGTCGAAGGGCAAAGGCAACAAGATTATCAACATTCCATCGGCAGAAGCCGCGCGTGGAGAAGATGGTCTGGCGCAATTGTACGTTCTGCCGCCGCAAAGCACGCTGACCATTCATGTTGGGAAACGCAAAATTAAACTGCGCCCGGAAGAGTTACAGAAAGTCACTGGCGAACGTGGACGCCGCGGTACGTTGATGCGCGGTTTGCAGCGTATCGATCGTGTTGAGATCGACTCTCCTCGCCGTGCCAGCAGCGGTGATAGCGAAGAGTAA", + "dna_sequence_length": 2259, + "functions": [ + "DNA topoisomerase IV, subunit A" + ], + "id": "CDS_2969", + "location": [ + [ + "NC_000913", + 3165973, + "-", + 2259 + ] + ], + "md5": "27178e2d2d327c104f6cf14b37a29787", + "parent_gene": "", + "protein_md5": "a8ab4921f417360aa1025821a5f3de3c", + "protein_translation": "MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE", + "protein_translation_length": 752, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009920" + ], + [ + "gene_synonym", + "ECK3011" + ], + [ + "gene_synonym", + "EcoGene:EG13021" + ], + [ + "gene_synonym", + "GI:16130916" + ], + [ + "gene_synonym", + "GeneID:947140" + ], + [ + "gene_synonym", + "JW2988" + ], + [ + "gene_synonym", + "NP_417492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46863" + ], + [ + "gene_synonym", + "b3020" + ], + [ + "gene_synonym", + "ygiS" + ] + ], + "dna_sequence": "ATGTATACGCGAAATTTATTATGGCTGGTCAGCCTGGTAAGTGCGGCTCCTCTCTACGCTGCTGACGTTCCCGCCAACACACCGCTCGCCCCGCAACAAGTCTTTCGTTACAACAATCATAGCGACCCAGGTACGCTCGACCCGCAAAAGGTGGAGGAGAATACTGCCGCGCAGATTGTGCTGGATCTGTTTGAAGGTCTGGTATGGATGGACGGTGAAGGCCAGGTGCAGCCCGCTCAGGCTGAACGCTGGGAGATACTGGACGGCGGCAAGCGCTATATTTTCCATCTGCGTAGCGGTTTGCAGTGGTCCGACGGTCAGCCTCTGACGGCAGAGGATTTTGTCCTCGGCTGGCAGCGCGCGGTTGACCCGAAAACGGCAAGCCCTTTTGCTGGCTATCTGGCACAGGCGCACATTAACAATGCCGCAGCTATTGTTGCGGGTAAAGCAGATGTTACATCGCTGGGTGTCAAAGCGACGGATGATCGTACTCTTGAAGTTACGCTTGAGCAGCCGGTTCCTTGGTTCACGACGATGCTCGCCTGGCCGACGCTGTTCCCGGTTCCTCATCATGTCATCGCTAAACATGGCGATAGCTGGAGTAAGCCAGAGAACATGGTTTACAACGGTGCCTTTGTGCTTGATCAGTGGGTAGTTAACGAAAAGATTACTGCACGCAAAAATCCAAAGTACCGCGATGCGCAACATACAGTATTGCAACAGGTTGAGTATCTGGCGCTAGATAATTCGGTCACCGGCTATAACCGCTATCGCGCGGGAGAGGTCGATCTCACCTGGGTTCCGGCGCAGCAAATTCCCGCCATTGAAAAATCACTGCCTGGCGAGCTACGAATTATTCCGCGTCTGAACAGCGAATATTACAACTTCAACCTTGAGAAACCGCCATTTAACGATGTGCGAGTGCGTCGGGCGCTATATCTTACGGTTGATCGACAGCTTATTGCGCAAAAGGTACTGGGGTTGAGAACGCCCGCAACCACGCTGACGCCGCCAGAGGTAAAAGGCTTTAGCGCGACGACGTTCGATGAACTGCAAAAGCCAATGAGTGAGCGCGTCGCGATGGCAAAAGCCTTGCTGAAACAGGCGGGATACGACGCCTCTCATCCGCTACGCTTTGAGCTGTTCTACAACAAGTACGATCTGCATGAAAAGACCGCGATAGCGTTGTCTTCCGAATGGAAAAAATGGCTGGGTGCACAGGTGACGCTGCGCACAATGGAGTGGAAAACCTATCTTGATGCCCGACGAGCCGGTGATTTCATGCTGTCTCGGCAGTCGTGGGATGCGACGTACAATGATGCTTCCAGCTTCCTGAACACGCTCAAAAGCGATAGTGAAGAAAACGTCGGTCACTGGAAAAATGCGCAGTATGACGCCTTACTAAACCAGGCCACGCAGATCACTGATGCGACAAAGCGTAATGCGTTGTATCAGCAGGCAGAAGTGATCATCAACCAACAGGCACCGCTGATTCCTATCTACTATCAGCCGTTAATCAAACTGCTTAAACCCTACGTTGGCGGTTTTCCGCTGCATAATCCCCAGGATTATGTCTACAGCAAAGAGTTGTATATCAAGGCACATTGA", + "dna_sequence_length": 1608, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_2970", + "location": [ + [ + "NC_000913", + 3167718, + "-", + 1608 + ] + ], + "md5": "a11bc2a61369849616f34c1b9d7c98d3", + "parent_gene": "", + "protein_md5": "2eb89a6976c828a20fdfc132c035bc6d", + "protein_translation": "MYTRNLLWLVSLVSAAPLYAADVPANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERWEILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTMLAWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWVVNEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEKPPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSATTFDELQKPMSERVAMAKALLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTYLDARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQATQITDATKRNALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH", + "protein_translation_length": 535, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009923" + ], + [ + "gene_synonym", + "ECK3012" + ], + [ + "gene_synonym", + "EcoGene:EG13022" + ], + [ + "gene_synonym", + "GI:16130917" + ], + [ + "gene_synonym", + "GeneID:945814" + ], + [ + "gene_synonym", + "JW2989" + ], + [ + "gene_synonym", + "NP_417493.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46864" + ], + [ + "gene_synonym", + "b3021" + ], + [ + "gene_synonym", + "mqsA" + ], + [ + "gene_synonym", + "ygiT" + ] + ], + "dna_sequence": "ATGAAATGTCCGGTTTGCCACCAGGGAGAAATGGTTTCTGGCATTAAAGATATTCCATACACCTTCCGTGGACGAAAAACAGTATTGAAAGGTATCCACGGTTTATATTGTGTCCATTGCGAAGAGAGCATCATGAATAAAGAAGAGTCAGATGCTTTCATGGCGCAAGTAAAGGCATTTCGGGCTTCGGTGAATGCCGAAACAGTGGCACCTGAATTTATAGTGAAGGTTCGAAAAAAGCTCTCTCTTACCCAAAAAGAGGCAAGCGAAATTTTTGGGGGAGGTGTAAATGCGTTTTCGCGTTACGAAAAAGGCAATGCCCAACCTCATCCTTCCACAATCAAACTTTTACGTGTTCTGGATAAGCATCCAGAACTATTGAATGAAATCCGTTAA", + "dna_sequence_length": 396, + "functions": [ + "antitoxin for MqsR toxin", + "transcriptional repressor" + ], + "id": "CDS_2971", + "location": [ + [ + "NC_000913", + 3168246, + "-", + 396 + ] + ], + "md5": "9f2c5cd485550adbedc5e5fb58ded044", + "parent_gene": "", + "protein_md5": "1717100b8891bada43f38885bdb45c2b", + "protein_translation": "MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009925" + ], + [ + "gene_synonym", + "ECK3013" + ], + [ + "gene_synonym", + "EcoGene:EG13023" + ], + [ + "gene_synonym", + "GI:16130918" + ], + [ + "gene_synonym", + "GeneID:947500" + ], + [ + "gene_synonym", + "JW2990" + ], + [ + "gene_synonym", + "NP_417494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46865" + ], + [ + "gene_synonym", + "b3022" + ], + [ + "gene_synonym", + "mqsR" + ], + [ + "gene_synonym", + "ygiU" + ] + ], + "dna_sequence": "ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAGTGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACTTTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTTTATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA", + "dna_sequence_length": 297, + "functions": [ + "GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system", + "biofilm/motility regulator", + "anti-repressor" + ], + "id": "CDS_2972", + "location": [ + [ + "NC_000913", + 3168544, + "-", + 297 + ] + ], + "md5": "6235181deda5564891455d578c3a5141", + "parent_gene": "", + "protein_md5": "51c113056902e5b919dcadc144985608", + "protein_translation": "MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQVYLKITVIHDVLIVSFKEK", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009928" + ], + [ + "gene_synonym", + "ECK3014" + ], + [ + "gene_synonym", + "EcoGene:EG13024" + ], + [ + "gene_synonym", + "GI:49176303" + ], + [ + "gene_synonym", + "GeneID:945805" + ], + [ + "gene_synonym", + "JW5502" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46866" + ], + [ + "gene_synonym", + "YP_026197.1" + ], + [ + "gene_synonym", + "b3023" + ], + [ + "gene_synonym", + "ygiV" + ] + ], + "dna_sequence": "ATGACAAACCTGACACTGGATGTAAACATTATCGATTTCCCATCAATACCTGTGGCGATGTTGCCGCACCGCTGTAGCCCTGAATTGCTCAACTACAGCGTGGCGAAATTTATCATGTGGCGTAAAGAGACGGGGCTTTCTCCTGTTAACCAAAGCCAGACTTTTGGCGTCGCCTGGGACGACCCTGCCACCACCGCACCGGAAGCGTTTCGCTTTGATATCTGCGGCAGCGTTAGCGAACCGATTCCCGATAATCGTTATGGTGTGAGCAATGGTGAACTTACCGGTGGACGTTATGCCGTGGCCCGCCACGTTGGCGAGCTGGACGATATTTCACACACGGTATGGGGCATCATTCGCCACTGGCTGCCTGCAAGCGGCGAGAAAATGCGTAAAGCACCGATTCTGTTTCACTACACCAATCTTGCCGAAGGGGTGACAGAGCAGCGACTGGAAACGGATGTTTATGTGCCGTTGGCGTGA", + "dna_sequence_length": 483, + "functions": [ + "transcriptional repressor for mcbR biofilm gene" + ], + "id": "CDS_2973", + "location": [ + [ + "NC_000913", + 3169231, + "-", + 483 + ] + ], + "md5": "8257d0ae0c8687e74cb7b99af3c6a994", + "parent_gene": "", + "protein_md5": "3fe4a5416a2405f9dfe93ad88db2e9ef", + "protein_translation": "MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009930" + ], + [ + "gene_synonym", + "ECK3015" + ], + [ + "gene_synonym", + "EcoGene:EG13025" + ], + [ + "gene_synonym", + "GI:16130920" + ], + [ + "gene_synonym", + "GeneID:946051" + ], + [ + "gene_synonym", + "JW2992" + ], + [ + "gene_synonym", + "NP_417496.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADU5" + ], + [ + "gene_synonym", + "b3024" + ], + [ + "gene_synonym", + "ygiW" + ] + ], + "dna_sequence": "ATGAAAAAATTCGCAGCAGTAATCGCAGTAATGGCCCTGTGCAGCGCACCGGTGATGGCAGCAGAGCAGGGCGGTTTTTCTGGCCCATCGGCAACGCAAAGTCAGGCCGGAGGATTCCAGGGGCCGAACGGCAGCGTAACGACTGTAGAAAGCGCAAAATCCCTGCGTGACGACACCTGGGTAACCCTGCGCGGCAATATCGTTGAACGCATCTCTGACGATCTCTACGTGTTCAAAGATGCCAGCGGTACTATCAATGTTGATATCGACCACAAACGCTGGAACGGCGTGACGGTGACGCCGAAAGATACGGTTGAGATTCAGGGTGAAGTCGATAAAGACTGGAATTCTGTTGAAATTGACGTCAAACAGATCCGCAAAGTAAATCCGTAA", + "dna_sequence_length": 393, + "functions": [ + "hydrogen peroxide and cadmium resistance periplasmic protein", + "stress-induced OB-fold protein" + ], + "id": "CDS_2974", + "location": [ + [ + "NC_000913", + 3169676, + "-", + 393 + ] + ], + "md5": "0b4cc9a6b35abd4bd99d936772327f6f", + "parent_gene": "", + "protein_md5": "08a9b1348813752b10bb807c80c4b69b", + "protein_translation": "MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWNSVEIDVKQIRKVNP", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009936" + ], + [ + "gene_synonym", + "ECK3016" + ], + [ + "gene_synonym", + "EcoGene:EG13026" + ], + [ + "gene_synonym", + "GI:16130921" + ], + [ + "gene_synonym", + "GeneID:945369" + ], + [ + "gene_synonym", + "JW2993" + ], + [ + "gene_synonym", + "NP_417497.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52076" + ], + [ + "gene_synonym", + "b3025" + ], + [ + "gene_synonym", + "preA" + ], + [ + "gene_synonym", + "qseB" + ], + [ + "gene_synonym", + "ygiX" + ] + ], + "dna_sequence": "ATGCGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAACGTGTAGAAGGGCTGCGTCTGGGAGCTGACGATTATCTGTGTAAACCTTTTGCGTTGATAGAAGTCGCCGCCAGGCTGGAAGCTCTGATGCGCCGAACCAACGGCCAGGCCAGCAACGAGCTGCGCCACGGTAACGTCATGCTCGACCCCGGCAAACGTATCGCCACGCTGGCTGGCGAACCCTTAACACTGAAACCAAAAGAATTTGCCCTGCTGGAATTACTGATGCGTAACGCTGGTCGGGTACTGTCGCGCAAACTGATTGAAGAGAAACTGTATACCTGGGACGAAGAGGTCACCAGTAATGCCGTTGAAGTGCATGTGCATCATCTGCGACGCAAACTCGGTAGTGATTTTATTCGTACCGTGCATGGTATTGGTTACACATTAGGTGAGAAATGA", + "dna_sequence_length": 660, + "functions": [ + "quorum sensing DNA-binding response regulator in two-component regulatory system with QseC" + ], + "id": "CDS_2975", + "location": [ + [ + "NC_000913", + 3169828, + "+", + 660 + ] + ], + "md5": "f393e5bf306c6175aea971f8c53aeda0", + "parent_gene": "", + "protein_md5": "626980a5f745e5065979b52104d034da", + "protein_translation": "MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009938" + ], + [ + "gene_synonym", + "ECK3017" + ], + [ + "gene_synonym", + "EcoGene:EG13027" + ], + [ + "gene_synonym", + "GI:16130922" + ], + [ + "gene_synonym", + "GeneID:947174" + ], + [ + "gene_synonym", + "JW2994" + ], + [ + "gene_synonym", + "NP_417498.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40719" + ], + [ + "gene_synonym", + "b3026" + ], + [ + "gene_synonym", + "preB" + ], + [ + "gene_synonym", + "qseC" + ], + [ + "gene_synonym", + "ygiY" + ] + ], + "dna_sequence": "ATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGACGCTAATCTTTTTAATTCTGGCCTCGGTGACCTGGCTGCTTTCCAGCTTTGTCGCCTGGAAACAAACAACGGATAACGTCGATGAATTGTTCGACACCCAACTGATGCTGTTTGCCAAGCGGTTAAGTACGCTCGATCTCAACGAAATCAACGCGGCGGATCGCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACTGGTTGAGTCGCTAAATCAACTGTTCGCCCGCACACATGCGATGATGGTTCGTGAACGACGCTTTACCTCCGACGCAGCTCACGAACTTCGTAGCCCGTTAACGGCGCTGAAAGTGCAAACCGAAGTTGCGCAGCTCTCTGACGATGATCCGCAGGCGCGGAAAAAAGCACTGCTCCAATTACATTCCGGGATCGATCGCGCTACTCGTCTGGTTGATCAACTGCTCACGCTATCGCGGCTGGACTCACTGGATAACCTTCAGGACGTCGCGGAGATCCCGCTTGAAGATCTCCTGCAATCGTCGGTGATGGATATTTACCACACGGCGCAGCAGGCGAAAATTGACGTGCGACTGACACTCAATGCCCACAGCATCAAACGCACCGGGCAACCGCTATTGCTAAGTTTGTTGGTGCGAAATTTGCTGGATAACGCCGTGCGCTACAGTCCACAGGGCAGCGTGGTAGACGTCACGCTGAATGCTGATAATTTCATCGTGAGGGATAACGGCCCCGGTGTGACACCAGAGGCACTGGCGCGAATTGGCGAACGCTTCTATCGCCCACCCGGACAAACCGCTACCGGCAGCGGGCTTGGGCTATCGATTGTCCAGCGAATCGCCAAATTGCATGGCATGAATGTTGAATTTGGGAATGCGGAACAAGGTGGATTTGAGGCGAAGGTAAGCTGGTAA", + "dna_sequence_length": 1350, + "functions": [ + "quorum sensing sensory histidine kinase in two-component regulatory system with QseB" + ], + "id": "CDS_2976", + "location": [ + [ + "NC_000913", + 3170484, + "+", + 1350 + ] + ], + "md5": "a4b82de4dc929c8ad23703985f5a33d8", + "parent_gene": "", + "protein_md5": "7e239e0da9f826630c337cc62cbd52bd", + "protein_translation": "MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDLNEINAADRMAQTPNRLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW", + "protein_translation_length": 449, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009940" + ], + [ + "gene_synonym", + "ECK3018" + ], + [ + "gene_synonym", + "EcoGene:EG13028" + ], + [ + "gene_synonym", + "GI:16130923" + ], + [ + "gene_synonym", + "GeneID:946450" + ], + [ + "gene_synonym", + "JW2995" + ], + [ + "gene_synonym", + "NP_417499.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46867" + ], + [ + "gene_synonym", + "b3027" + ], + [ + "gene_synonym", + "ygiZ" + ] + ], + "dna_sequence": "ATGTTAAAGCAGAAAATTAAAACAATATTTGAAGCATTGCTATATATAATGCTTACTTATTGGTTAATAGATTCTTTTTTTGCTTTCAATAAGTATGACTGGATGCTTGAGTCGGGAGGAAATATTTGCAGTATACCTTCCGTTTCAGGCGAAGATCGTATATTGCAAGCAATGATTGCAGCATTTTTTCTTCTTACGCCACTTATTATTCTTATCTTAAGAAAACTCTTTATGCGGGAAATGTTCGAGTTTTGGGTATATGTATTCTCGCTCGGTATTTGTCTGGTTTGTGGTTGGTGGCTTTTTTGGGGACGGTTTATATTTTGCTATTAG", + "dna_sequence_length": 333, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_2977", + "location": [ + [ + "NC_000913", + 3172211, + "-", + 333 + ] + ], + "md5": "d0f72698e48788249eb3c3c896286f06", + "parent_gene": "", + "protein_md5": "7430480ec15e900068ef45baa7e99ad3", + "protein_translation": "MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLFWGRFIFCY", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009946" + ], + [ + "gene_synonym", + "ECK3019" + ], + [ + "gene_synonym", + "EcoGene:EG12656" + ], + [ + "gene_synonym", + "GI:16130924" + ], + [ + "gene_synonym", + "GeneID:947512" + ], + [ + "gene_synonym", + "JW2996" + ], + [ + "gene_synonym", + "NP_417500.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEY5" + ], + [ + "gene_synonym", + "b3028" + ], + [ + "gene_synonym", + "mda66" + ], + [ + "gene_synonym", + "mdaB" + ] + ], + "dna_sequence": "ATGAGCAACATCCTGATTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGATGTCAAAGCGGAAGTACAAAACTTTCTCTGGGCTGATGTGGTGATCTGGCAGATGCCAGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGAAGCCTTCACCGAAAAAGATCAGTTCTTCCACGGCGTTGGCGTTGACGGTGTGTATCTGCCGTTCCATAAAGCAAACCAATTCCTCGGTATGGAACCGCTGCCGACATTTATCGCTAATGACGTGATAAAAATGCCTGATGTTCCCCGCTATACTGAAGAATATCGCAAGCATCTTGTGGAAATTTTTGGTTAA", + "dna_sequence_length": 582, + "functions": [ + "NADPH quinone reductase" + ], + "id": "CDS_2978", + "location": [ + [ + "NC_000913", + 3172530, + "+", + 582 + ] + ], + "md5": "a57a88c3bbd41465dab6691459fc6309", + "parent_gene": "", + "protein_md5": "28a8b4a3d9a5ea8750cd2036f45b4819", + "protein_translation": "MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009948" + ], + [ + "gene_synonym", + "ECK3020" + ], + [ + "gene_synonym", + "EcoGene:EG12657" + ], + [ + "gene_synonym", + "GI:16130925" + ], + [ + "gene_synonym", + "GeneID:947506" + ], + [ + "gene_synonym", + "JW2997" + ], + [ + "gene_synonym", + "NP_417501.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADU2" + ], + [ + "gene_synonym", + "b3029" + ], + [ + "gene_synonym", + "ygiN" + ] + ], + "dna_sequence": "ATGCTTACCGTAATCGCAGAAATCCGTACTCGTCCTGGTCAACATCACCGTCAGGCGGTATTGGATCAGTTTGCTAAAATCGTTCCAACCGTACTGAAAGAAGAAGGTTGCCACGGCTATGCGCCAATGGTGGATTGCGCAGCTGGCGTGAGTTTCCAGTCTATGGCACCGGATTCTATCGTGATGATTGAGCAGTGGGAAAGCATCGCGCATCTTGAAGCGCATCTGCAAACCCCGCACATGAAGGCGTATAGCGAAGCCGTAAAAGGTGACGTGCTGGAGATGAATATCCGTATTCTGCAGCCAGGGATTTAA", + "dna_sequence_length": 315, + "functions": [ + "quinol monooxygenase" + ], + "id": "CDS_2979", + "location": [ + [ + "NC_000913", + 3173142, + "+", + 315 + ] + ], + "md5": "5019f17c2d1955714790c3fd37e67249", + "parent_gene": "", + "protein_md5": "f69c64219e2f9f7854c82b7c6d5a6bc7", + "protein_translation": "MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPGI", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009950" + ], + [ + "gene_synonym", + "ECK3021" + ], + [ + "gene_synonym", + "EcoGene:EG10687" + ], + [ + "gene_synonym", + "GI:16130926" + ], + [ + "gene_synonym", + "GeneID:947501" + ], + [ + "gene_synonym", + "JW2998" + ], + [ + "gene_synonym", + "NP_417502.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P20083" + ], + [ + "gene_synonym", + "b3030" + ], + [ + "gene_synonym", + "nfxD" + ], + [ + "gene_synonym", + "parE" + ] + ], + "dna_sequence": "ATGACGCAAACTTATAACGCTGATGCCATTGAGGTACTCACCGGGCTTGAGCCGGTTCGCCGCCGTCCGGGGATGTATACCGATACCACTCGCCCTAACCATTTGGGGCAAGAAGTCATTGATAACAGTGTGGATGAAGCACTGGCGGGTCACGCAAAACGCGTGGACGTTATTTTACATGCTGACCAGTCGTTAGAAGTTATTGACGATGGGCGCGGGATGCCGGTGGATATTCACCCGGAAGAGGGTGTACCGGCGGTTGAACTGATTCTTTGCCGTCTGCATGCAGGCGGTAAATTCTCTAACAAAAATTACCAGTTCTCTGGCGGCCTGCATGGCGTGGGGATTTCGGTGGTTAACGCCCTGTCGAAGCGCGTAGAAGTTAACGTGCGCCGCGATGGTCAGGTTTATAACATCGCCTTTGAAAATGGCGAAAAGGTGCAGGATTTACAGGTTGTCGGCACTTGCGGTAAACGCAATACTGGTACCAGTGTGCACTTCTGGCCGGATGAAACCTTCTTTGACAGCCCGCGATTTTCTGTTTCACGCCTGACGCATGTGCTGAAAGCCAAAGCGGTATTGTGCCCTGGCGTTGAGATCACTTTTAAAGATGAGATCAACAATACCGAACAACGCTGGTGCTATCAGGACGGTCTGAATGATTACCTGGCGGAAGCGGTAAATGGTCTGCCGACGCTGCCGGAAAAACCGTTTATCGGTAATTTCGCTGGTGATACTGAAGCTGTGGACTGGGCGCTACTGTGGCTGCCGGAAGGCGGTGAACTGCTGACCGAAAGCTACGTCAACCTTATCCCAACGATGCAGGGCGGTACCCATGTTAATGGTCTGCGTCAGGGCCTGTTGGACGCGATGCGTGAGTTCTGTGAATACCGCAATATTCTGCCGCGCGGTGTAAAGCTGTCGGCGGAAGATATCTGGGATCGCTGCGCCTATGTGCTGTCAGTAAAAATGCAGGATCCGCAGTTTGCCGGGCAGACGAAAGAGCGTCTCTCTTCGCGTCAATGCGCGGCATTCGTTTCTGGCGTGGTGAAAGATGCCTTTATCCTGTGGCTGAACCAGAACGTTCAGGCGGCTGAACTGCTGGCGGAGATGGCGATTTCCAGCGCCCAGCGCCGTATGCGTGCGGCCAAAAAAGTGGTGCGTAAAAAGCTGACCAGCGGCCCGGCGTTGCCTGGCAAACTGGCTGATTGTACCGCGCAGGACCTTAACCGTACCGAGCTGTTCCTTGTGGAAGGTGACTCCGCAGGCGGATCTGCCAAGCAGGCGCGCGATCGCGAATATCAGGCGATCATGCCACTGAAAGGTAAGATCCTTAACACCTGGGAAGTCTCTTCCGACGAAGTGCTGGCTTCGCAGGAAGTGCACGATATTTCGGTAGCGATCGGTATCGATCCTGACAGCGACGATCTGAGCCAGCTTCGTTATGGCAAAATCTGTATCCTCGCGGATGCGGACTCTGATGGTCTGCACATTGCCACGCTGCTCTGCGCTTTGTTCGTAAAACATTTCCGCGCGTTGGTGAAACACGGTCACGTTTACGTCGCACTGCCACCGCTCTACCGTATTGATCTCGGGAAAGAGGTTTATTACGCGCTGACGGAAGAAGAGAAAGAGGGCGTACTTGAGCAATTAAAACGCAAGAAAGGCAAGCCGAACGTCCAGCGTTTTAAAGGTCTGGGGGAAATGAACCCGATGCAATTGCGCGAAACCACGCTTGATCCGAACACTCGCCGTCTGGTGCAGTTGACTATCGATGATGAAGACGATCAGCGTACTGACGCGATGATGGATATGCTGCTGGCGAAGAAACGCTCGGAAGATCGCCGCAACTGGTTGCAAGAGAAAGGCGACATGGCGGAGATTGAGGTTTAA", + "dna_sequence_length": 1893, + "functions": [ + "DNA topoisomerase IV, subunit B" + ], + "id": "CDS_2980", + "location": [ + [ + "NC_000913", + 3175396, + "-", + 1893 + ] + ], + "md5": "c8b376e551989647dbe5af5d0f4f74cf", + "parent_gene": "", + "protein_md5": "f5687ae93ae586f4f9ea80ed1c23a9e2", + "protein_translation": "MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGDMAEIEV", + "protein_translation_length": 630, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009953" + ], + [ + "gene_synonym", + "ECK3022" + ], + [ + "gene_synonym", + "EcoGene:EG12186" + ], + [ + "gene_synonym", + "GI:16130927" + ], + [ + "gene_synonym", + "GeneID:947488" + ], + [ + "gene_synonym", + "JW2999" + ], + [ + "gene_synonym", + "NP_417503.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Z7" + ], + [ + "gene_synonym", + "b3031" + ], + [ + "gene_synonym", + "yqiA" + ], + [ + "gene_synonym", + "yzzI" + ] + ], + "dna_sequence": "ATGTCTACGCTTCTTTATTTACACGGTTTCAACAGCTCGCCGCGCTCTGCAAAAGCGAGCTTGTTAAAAAACTGGCTGGCGGAACATCACCCTGACGTTGAGATGATCATTCCGCAGTTGCCGCCGTATCCTTCCGACGCGGCAGAGCTGCTGGAATCCATTGTCCTGGAACATGGCGGTGATTCGCTGGGTATTGTCGGTTCGTCACTGGGGGGATATTACGCCACCTGGTTGTCACAATGTTTTATGCTGCCCGCAGTGGTGGTAAACCCGGCGGTGCGCCCGTTTGAACTGCTGACGGACTATCTCGGTCAGAACGAGAACCCCTACACCGGGCAGCAATATGTGCTAGAGTCACGCCATATTTACGATCTTAAAGTCATGCAGATTGACCCGCTGGAAGCGCCGGATTTGATCTGGCTGCTGCAACAGACGGGAGATGAAGTGCTGGATTACCGCCAGGCGGTGGCGTACTACGCTTCCTGCCGCCAGACTGTCATAGAAGGCGGCAACCACGCATTCACGGGCTTCGAAGATTATTTCAACCCGATCGTCGATTTTCTTGGTCTGCACCATCTCTGA", + "dna_sequence_length": 582, + "functions": [ + "acyl CoA esterase" + ], + "id": "CDS_2981", + "location": [ + [ + "NC_000913", + 3176006, + "-", + 582 + ] + ], + "md5": "cddcdb276dd050d8da23e5d92b79bad3", + "parent_gene": "", + "protein_md5": "ef0dad65ad91b11ac442e559dda68e16", + "protein_translation": "MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009957" + ], + [ + "gene_synonym", + "ECK3023" + ], + [ + "gene_synonym", + "EcoGene:EG12187" + ], + [ + "gene_synonym", + "GI:16130928" + ], + [ + "gene_synonym", + "GeneID:947515" + ], + [ + "gene_synonym", + "JW3000" + ], + [ + "gene_synonym", + "NP_417504.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEW4" + ], + [ + "gene_synonym", + "b3032" + ], + [ + "gene_synonym", + "cpdA" + ], + [ + "gene_synonym", + "icc" + ] + ], + "dna_sequence": "TTGGAAAGCCTGTTAACCCTTCCTCTGGCTGGTGAGGCCAGAGTCAGGATTTTACAAATTACCGACACTCACCTGTTTGCACAAAAGCACGAAGCCCTGTTAGGGGTAAACACCTGGGAGAGTTACCAGGCGGTGCTGGAGGCGATTCGGCCACACCAGCACGAATTCGACCTGATTGTCGCGACAGGTGATTTAGCGCAGGATCAATCCTCTGCGGCCTATCAGCATTTCGCTGAAGGCATCGCAAGTTTTCGTGCGCCCTGCGTCTGGCTGCCGGGCAACCACGATTTCCAGCCCGCGATGTACAGCGCGTTACAGGATGCGGGTATCTCCCCGGCGAAGCGCGTGTTTATTGGTGAGCAATGGCAAATCCTGTTGCTGGATAGCCAGGTGTTTGGCGTGCCGCACGGTGAGCTGAGCGAGTTTCAGCTTGAGTGGCTGGAACGTAAACTGGCCGATGCGCCAGAACGCCATACGTTGCTGCTGCTGCATCATCATCCGCTACCTGCGGGTTGTAGTTGGCTCGATCAACACAGTCTGCGTAACGCGGGCGAACTGGATACCGTGCTGGCGAAGTTTCCGCACGTCAAATACTTGCTGTGCGGTCATATTCATCAGGAGCTGGATCTCGACTGGAATGGTCGCCGCCTGCTGGCAACGCCGTCGACCTGTGTGCAGTTTAAGCCGCACTGTTCCAACTTTACGCTGGATACCATCGCGCCCGGCTGGCGTACTCTCGAGTTACATGCTGATGGCACGCTGACCACCGAGGTGCATCGCCTGGCGGACACACGTTTCCAACCTGATACCGCTTCAGAAGGCTACTGA", + "dna_sequence_length": 828, + "functions": [ + "3',5' cAMP phosphodiesterase" + ], + "id": "CDS_2982", + "location": [ + [ + "NC_000913", + 3176833, + "-", + 828 + ] + ], + "md5": "de6c479f15eb1d344c2493f3f618013d", + "parent_gene": "", + "protein_md5": "e8adcf72127499abb7f967102ffbd308", + "protein_translation": "MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQAVLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMYSALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTLLLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLLATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY", + "protein_translation_length": 275, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009959" + ], + [ + "gene_synonym", + "ECK3024" + ], + [ + "gene_synonym", + "EcoGene:EG12185" + ], + [ + "gene_synonym", + "GI:16130929" + ], + [ + "gene_synonym", + "GeneID:947518" + ], + [ + "gene_synonym", + "JW3001" + ], + [ + "gene_synonym", + "NP_417505.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADU7" + ], + [ + "gene_synonym", + "b3033" + ], + [ + "gene_synonym", + "yqiB" + ], + [ + "gene_synonym", + "yzzH" + ] + ], + "dna_sequence": "ATGAAGCGTTACACACCTGACTTTCCTGAAATGATGCGCCTGTGCGAGATGAACTTTTCACAATTGCGCCGTTTGTTACCGCGCAATGACGCACCCGGCGAAACTGTAAGCTATCAGGTGGCAAACGCACAATATCGGCTGACGATTGTGGAATCGACCCGATACACTACCCTGGTGACAATAGAACAGACTGCGCCCGCGATCAGTTACTGGAGCCTTCCGTCAATGACGGTGCGTCTGTATCATGACGCGATGGTGGCTGAAGTGTGTTCAAGCCAGCAGATTTTTCGCTTCAAAGCGCGGTATGATTATCCTAATAAAAAGTTGCATCAACGCGACGAAAAGCATCAAATTAATCAGTTTTTAGCGGACTGGTTGCGATACTGTTTAGCACATGGAGCGATGGCGATTCCGGTTTATTAG", + "dna_sequence_length": 423, + "functions": [ + "DUF1249 protein YqiB" + ], + "id": "CDS_2983", + "location": [ + [ + "NC_000913", + 3177280, + "-", + 423 + ] + ], + "md5": "693b4b7ffc6d9366f65c4dfbfa2929da", + "parent_gene": "", + "protein_md5": "829ccc807bb107b78bc485e05956cfac", + "protein_translation": "MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009961" + ], + [ + "gene_synonym", + "ECK3025" + ], + [ + "gene_synonym", + "EcoGene:EG12184" + ], + [ + "gene_synonym", + "GI:16130930" + ], + [ + "gene_synonym", + "GeneID:947519" + ], + [ + "gene_synonym", + "JW3002" + ], + [ + "gene_synonym", + "NP_417506.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q93K97" + ], + [ + "gene_synonym", + "adpP" + ], + [ + "gene_synonym", + "aspP" + ], + [ + "gene_synonym", + "b3034" + ], + [ + "gene_synonym", + "nudF" + ], + [ + "gene_synonym", + "rdsA" + ], + [ + "gene_synonym", + "trgB" + ], + [ + "gene_synonym", + "yqiE" + ], + [ + "gene_synonym", + "yzzG" + ] + ], + "dna_sequence": "ATGCTTAAGCCAGACAACCTGCCCGTTACATTTGGCAAAAACGATGTAGAAATTATTGCACGAGAAACACTTTATCGCGGCTTTTTTTCATTAGATCTTTATAGATTTCGTCATCGTCTATTCAACGGGCAAATGAGTCATGAGGTGCGGCGGGAAATTTTTGAGCGCGGTCACGCCGCAGTCTTGCTACCCTTTGACCCAGTGCGTGATGAAGTTGTGCTGATTGAGCAGATTCGGATTGCCGCGTACGACACCAGCGAAACCCCTTGGCTACTGGAGATGGTTGCCGGGATGATTGAAGAGGGTGAAAGTGTGGAAGATGTTGCCCGTCGCGAAGCGATTGAAGAGGCGGGACTGATAGTCAAACGGACCAAACCGGTGTTAAGTTTCCTGGCAAGCCCGGGGGGCACCAGTGAGCGTTCGTCAATTATGGTGGGCGAAGTGGACGCCACGACCGCAAGCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACCAGTGGGTAGAAGAGGGGAAAATCGACAACGCAGCGTCGGTCATCGCTTTGCAATGGCTGCAGCTGCATCATCAAGCGTTAAAAAATGAGTGGGCATAA", + "dna_sequence_length": 630, + "functions": [ + "ADP-ribose pyrophosphatase" + ], + "id": "CDS_2984", + "location": [ + [ + "NC_000913", + 3177910, + "-", + 630 + ] + ], + "md5": "19bd253458afd46cd25ea0140c0d7983", + "parent_gene": "", + "protein_md5": "b18f416701102b3c46e36034fc406489", + "protein_translation": "MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009965" + ], + [ + "gene_synonym", + "ECK3026" + ], + [ + "gene_synonym", + "EcoGene:EG11009" + ], + [ + "gene_synonym", + "GI:90111528" + ], + [ + "gene_synonym", + "GeneID:947521" + ], + [ + "gene_synonym", + "JW5503" + ], + [ + "gene_synonym", + "NP_417507.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02930" + ], + [ + "gene_synonym", + "b3035" + ], + [ + "gene_synonym", + "colE1-i" + ], + [ + "gene_synonym", + "mtcB" + ], + [ + "gene_synonym", + "mukA" + ], + [ + "gene_synonym", + "refI" + ], + [ + "gene_synonym", + "toc" + ], + [ + "gene_synonym", + "tolC" + ], + [ + "gene_synonym", + "weeA" + ] + ], + "dna_sequence": "ATGAAGAAATTGCTCCCCATTCTTATCGGCCTGAGCCTTTCTGGGTTCAGTTCGTTGAGCCAGGCCGAGAACCTGATGCAAGTTTATCAGCAAGCACGCCTTAGTAACCCGGAATTGCGTAAGTCTGCCGCCGATCGTGATGCTGCCTTTGAAAAAATTAATGAAGCGCGCAGTCCATTACTGCCACAGCTAGGTTTAGGTGCAGATTACACCTATAGCAACGGCTACCGCGACGCGAACGGCATCAACTCTAACGCGACCAGTGCGTCCTTGCAGTTAACTCAATCCATTTTTGATATGTCGAAATGGCGTGCGTTAACGCTGCAGGAAAAAGCAGCAGGGATTCAGGACGTCACGTATCAGACCGATCAGCAAACCTTGATCCTCAACACCGCGACCGCTTATTTCAACGTGTTGAATGCTATTGACGTTCTTTCCTATACACAGGCACAAAAAGAAGCGATCTACCGTCAATTAGATCAAACCACCCAACGTTTTAACGTGGGCCTGGTAGCGATCACCGACGTGCAGAACGCCCGCGCACAGTACGATACCGTGCTGGCGAACGAAGTGACCGCACGTAATAACCTTGATAACGCGGTAGAGCAGCTGCGCCAGATCACCGGTAACTACTATCCGGAACTGGCTGCGCTGAATGTCGAAAACTTTAAAACCGACAAACCACAGCCGGTTAACGCGCTGCTGAAAGAAGCCGAAAAACGCAACCTGTCGCTGTTACAGGCACGCTTGAGCCAGGACCTGGCGCGCGAGCAAATTCGCCAGGCGCAGGATGGTCACTTACCGACTCTGGATTTAACGGCTTCTACCGGGATTTCTGACACCTCTTATAGCGGTTCGAAAACCCGTGGTGCCGCTGGTACCCAGTATGACGATAGCAATATGGGCCAGAACAAAGTTGGCCTGAGCTTCTCGCTGCCGATTTATCAGGGCGGAATGGTTAACTCGCAGGTGAAACAGGCACAGTACAACTTTGTCGGTGCCAGCGAGCAACTGGAAAGTGCCCATCGTAGCGTCGTGCAGACCGTGCGTTCCTCCTTCAACAACATTAATGCATCTATCAGTAGCATTAACGCCTACAAACAAGCCGTAGTTTCCGCTCAAAGCTCATTAGACGCGATGGAAGCGGGCTACTCGGTCGGTACGCGTACCATTGTTGATGTGTTGGATGCGACCACCACGTTGTACAACGCCAAGCAAGAGCTGGCGAATGCGCGTTATAACTACCTGATTAATCAGCTGAATATTAAGTCAGCTCTGGGTACGTTGAACGAGCAGGATCTGCTGGCACTGAACAATGCGCTGAGCAAACCGGTTTCCACTAATCCGGAAAACGTTGCACCGCAAACGCCGGAACAGAATGCTATTGCTGATGGTTATGCGCCTGATAGCCCGGCACCAGTCGTTCAGCAAACATCCGCACGCACTACCACCAGTAACGGTCATAACCCTTTCCGTAACTGA", + "dna_sequence_length": 1482, + "functions": [ + "transport channel" + ], + "id": "CDS_2985", + "location": [ + [ + "NC_000913", + 3178115, + "+", + 1482 + ] + ], + "md5": "a432ab613769bc8513e77bee7eeaf25c", + "parent_gene": "", + "protein_md5": "43c25df8e3937e9cf2d501de8338fc94", + "protein_translation": "MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN", + "protein_translation_length": 493, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009969" + ], + [ + "gene_synonym", + "ECK3028" + ], + [ + "gene_synonym", + "EcoGene:EG11164" + ], + [ + "gene_synonym", + "GI:145698308" + ], + [ + "gene_synonym", + "GeneID:945086" + ], + [ + "gene_synonym", + "JW5927" + ], + [ + "gene_synonym", + "NP_417509.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADT2" + ], + [ + "gene_synonym", + "b3037" + ], + [ + "gene_synonym", + "ygiB" + ] + ], + "dna_sequence": "ATGAAACGGACAAAATCCATACGCCACGCATCGTTCCGCAAAAACTGGAGCGCACGCCATCTGACACCAGTCGCTCTCGCGGTTGCCACTGTTTTTATGCTGGCTGGCTGTGAAAAGAGTGATGAAACAGTGTCTCTCTATCAAAATGCTGACGACTGTTCAGCTGCAAACCCAGGCAAAAGCGCCGAATGTACCACCGCGTACAACAATGCGCTGAAAGAAGCCGAACGTACTGCGCCGAAATACGCCACCCGTGAAGACTGTGTTGCTGAATTTGGTGAAGGTCAGTGCCAGCAGGCACCAGCCCAGGCTGGCATGGCACCAGAAAACCAGGCGCAGGCCCAGCAATCCAGCGGGAGTTTCTGGATGCCGCTGATGGCCGGTTACATGATGGGGCGTCTGATGGGCGGCGGCGCGGGATTTGCACAGCAGCCGCTGTTCTCCTCGAAAAACCCAGCCAGTCCGGCTTACGGTAAATATACCGACGCGACGGGTAAAAACTATGGCGCAGCCCAGCCAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTGA", + "dna_sequence_length": 672, + "functions": [ + "DUF1190 family protein" + ], + "id": "CDS_2986", + "location": [ + [ + "NC_000913", + 3179744, + "+", + 672 + ] + ], + "md5": "0ec38ac0b51734e98d87466060b50198", + "parent_gene": "", + "protein_md5": "1e5087778c85c4bd82c5db4cfe1124f6", + "protein_translation": "MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009971" + ], + [ + "gene_synonym", + "ECK3029" + ], + [ + "gene_synonym", + "EcoGene:EG11165" + ], + [ + "gene_synonym", + "GI:16130934" + ], + [ + "gene_synonym", + "GeneID:947249" + ], + [ + "gene_synonym", + "JW3006" + ], + [ + "gene_synonym", + "NP_417510.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADT5" + ], + [ + "gene_synonym", + "b3038" + ], + [ + "gene_synonym", + "ygiC" + ] + ], + "dna_sequence": "ATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTACTGGTGTGAAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGCCGATACGCCAACGTCACTATACGAGGCGGCGTTCTTTCAGTGGATCTGGCTGGAAGATCAGCTTAACGCCGGTAACTTGCCGGAGGGCAGCGACCAGTTTAACAGTCTGCAAGAAAAACTGATCGATCGCTTCGTTGAGCTGCGTGAACAGTATGGCTTCCAGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCTACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCAAACTGTATCCGTGGGAATTTATGTTGCGTGAGATGTTCTCAACCAAGCTGGAGGATGCAGGCGTACGCTGGCTGGAACCGGCGTGGAAGAGCATTATCTCCAACAAGGCACTTCTACCGCTACTGTGGGAGATGTTCCCGAATCACCCGAACCTGCTGCCCGCTTATTTTGCGGAAGATGATCATCCGCAAATGGAAAAATATGTGGTTAAACCGATCTTCTCCCGTGAAGGCGCAAACGTGTCGATCATTGAGAACGGCAAAACCATTGAAGCAGCGGAAGGTCCGTATGGCGAAGAAGGGATGATTGTTCAGCAATTCCACCCGTTACCGAAATTCGGCGACAGCTATATGCTGATTGGTAGCTGGCTGGTGAACGATCAACCCGCCGGAATTGGCATTCGTGAAGACCGTGCATTGATCACCCAGGATATGTCTCGGTTTTATCCACATATTTTTGTTGAATAA", + "dna_sequence_length": 1161, + "functions": [ + "ATP-Grasp family ATPase" + ], + "id": "CDS_2987", + "location": [ + [ + "NC_000913", + 3180421, + "+", + 1161 + ] + ], + "md5": "4fa4d380901af8a3a5bdb79323efe9ef", + "parent_gene": "", + "protein_md5": "57e0a11356ce3ca0dc086400937f1a7e", + "protein_translation": "MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE", + "protein_translation_length": 386, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009973" + ], + [ + "gene_synonym", + "ECK3030" + ], + [ + "gene_synonym", + "EcoGene:EG11166" + ], + [ + "gene_synonym", + "GI:226524747" + ], + [ + "gene_synonym", + "GeneID:946447" + ], + [ + "gene_synonym", + "JW3007" + ], + [ + "gene_synonym", + "NP_417511.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24197" + ], + [ + "gene_synonym", + "b3039" + ], + [ + "gene_synonym", + "ygiD" + ] + ], + "dna_sequence": "ATGTCTTCAACACGTATGCCAGCATTGTTTTTAGGTCACGGTAGTCCGATGAACGTGCTGGAAGATAATTTGTATACCCGCAGCTGGCAGAAGTTGGGGATGACATTGCCACGCCCGCAAGCGATTGTGGTGGTTTCGGCTCACTGGTTTACCCGTGGAACAGGAGTGACCGCGATGGAGACGCCGCCCACGATTCATGACTTTGGTGGCTTCCCGCAGGCGCTGTACGATACGCATTATCCTGCTCCGGGTTCGCCTGCGCTGGCACAGCGTCTGGTTGAGCTGTTAGCGCCGATCCCGGTGACGCTGGATAAAGAAGCCTGGGGCTTTGACCACGGCTCGTGGGGCGTGCTGATTAAGATGTATCCTGACGCTGATATCCCGATGGTGCAGTTGAGTATCGACAGTAGCAAACCTGCCGCCTGGCATTTCGAAATGGGGCGCAAACTGGCAGCGCTGCGAGATGAAGGAATAATGTTGGTCGCCAGCGGTAACGTGGTGCATAACCTGCGCACAGTGAAGTGGCACGGTGATAGTTCACCGTATCCGTGGGCGACGTCGTTTAATGAGTATGTGAAAGCGAATCTGACGTGGCAAGGGCCAGTGGAACAACATCCTCTGGTGAATTACCTCGACCATGAAGGTGGCACGTTATCGAACCCAACGCCAGAGCATTATTTGCCGTTGTTGTATGTGTTAGGTGCGTGGGATGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAA", + "dna_sequence_length": 789, + "functions": [ + "4,5- DOPA-extradiol-dioxygenase" + ], + "id": "CDS_2988", + "location": [ + [ + "NC_000913", + 3182407, + "-", + 789 + ] + ], + "md5": "492fa3d2dc934cb41d8463508ed77178", + "parent_gene": "", + "protein_md5": "21e1252d555f2c6f08dacd2c8440e7ea", + "protein_translation": "MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009977" + ], + [ + "gene_synonym", + "ECK3031" + ], + [ + "gene_synonym", + "EcoGene:EG11167" + ], + [ + "gene_synonym", + "GI:16130936" + ], + [ + "gene_synonym", + "GeneID:947035" + ], + [ + "gene_synonym", + "JW3008" + ], + [ + "gene_synonym", + "NP_417512.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8H3" + ], + [ + "gene_synonym", + "b3040" + ], + [ + "gene_synonym", + "ygiE" + ], + [ + "gene_synonym", + "zupT" + ] + ], + "dna_sequence": "ATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGCAAAAACCCTCGAACCGCTTACTGGCGTTTTCGCTAGGTTTTGCGGCGGGGATCATGTTGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCACATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGCGAGCAGCAACCTGGAGCTGGGATTTGGCATCGCACTGGCCGTCGCGTTGCACAATATCCCTGAAGGTCTGGCAGTGGCAGGCCCGGTTTATGCGGCAACGGGGTCTAAACGCACCGCGATTCTGTGGGCGGGGATTTCTGGACTAGCAGAAATTCTTGGTGGTGTGCTGGCGTGGTTAATCCTCGGTAGCATGATTTCCCCGGTGGTCATGGCGGCAATCATGGCGGCGGTTGCAGGAATTATGGTGGCGCTCTCGGTTGATGAATTAATGCCGCTCGCCAAAGAGATTGACCCTAATAATAACCCCAGCTATGGCGTACTATGTGGAATGTCAGTGATGGGATTCAGTTTAGTGCTGCTACAAACGGCGGGAATTGGTTAA", + "dna_sequence_length": 774, + "functions": [ + "zinc transporter" + ], + "id": "CDS_2989", + "location": [ + [ + "NC_000913", + 3182550, + "+", + 774 + ] + ], + "md5": "00b172f1effe56eb0cab75dafb0c8104", + "parent_gene": "", + "protein_md5": "265d0972bd15046d7555cfda792abe62", + "protein_translation": "MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009980" + ], + [ + "gene_synonym", + "ECK3032" + ], + [ + "gene_synonym", + "EcoGene:EG10465" + ], + [ + "gene_synonym", + "GI:16130937" + ], + [ + "gene_synonym", + "GeneID:947526" + ], + [ + "gene_synonym", + "JW3009" + ], + [ + "gene_synonym", + "NP_417513.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7J0" + ], + [ + "gene_synonym", + "b3041" + ], + [ + "gene_synonym", + "htrP" + ], + [ + "gene_synonym", + "luxH" + ], + [ + "gene_synonym", + "ribB" + ] + ], + "dna_sequence": "ATGAATCAGACGCTACTTTCCTCTTTTGGTACGCCTTTCGAACGTGTTGAAAATGCACTGGCTGCGCTGCGTGAAGGACGCGGTGTAATGGTGCTTGATGATGAAGACCGTGAAAACGAAGGTGATATGATCTTCCCGGCAGAAACCATGACTGTTGAGCAGATGGCGCTGACCATTCGCCACGGTAGCGGTATTGTTTGCCTGTGCATTACTGAAGATCGCCGTAAACAACTCGATCTGCCAATGATGGTAGAAAATAACACCAGCGCCTATGGCACCGGTTTTACCGTGACCATTGAAGCAGCTGAAGGTGTGACTACCGGTGTTTCTGCCGCTGACCGTATTACGACCGTTCGCGCAGCGATTGCCGATGGCGCAAAACCGTCAGATCTGAATCGTCCTGGCCACGTTTTCCCACTTCGCGCTCAGGCAGGTGGTGTACTGACGCGTGGCGGTCATACTGAAGCAACTATTGATCTGATGACGCTGGCAGGCTTTAAACCGGCTGGTGTACTGTGTGAGCTGACTAATGACGATGGCACGATGGCGCGTGCACCAGAGTGTATTGAGTTTGCCAATAAACACAATATGGCGCTCGTGACTATTGAAGACCTGGTGGCATACCGTCAGGCACATGAGCGTAAAGCCAGCTGA", + "dna_sequence_length": 654, + "functions": [ + "3,4-dihydroxy-2-butanone-4-phosphate synthase" + ], + "id": "CDS_2990", + "location": [ + [ + "NC_000913", + 3184466, + "-", + 654 + ] + ], + "md5": "f73d389af15351e5348880f6b4e267c2", + "parent_gene": "", + "protein_md5": "7a0ee251aebd17f34ee42e9d84f7869d", + "protein_translation": "MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009987" + ], + [ + "gene_synonym", + "ECK3033" + ], + [ + "gene_synonym", + "EcoGene:EG13031" + ], + [ + "gene_synonym", + "GI:90111530" + ], + [ + "gene_synonym", + "GeneID:947524" + ], + [ + "gene_synonym", + "JW5505" + ], + [ + "gene_synonym", + "NP_417514.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46868" + ], + [ + "gene_synonym", + "b3042" + ], + [ + "gene_synonym", + "yqiC" + ] + ], + "dna_sequence": "ATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAACGCTGTAA", + "dna_sequence_length": 291, + "functions": [ + "BMFP family putative fusogenic protein" + ], + "id": "CDS_2991", + "location": [ + [ + "NC_000913", + 3184840, + "+", + 291 + ] + ], + "md5": "ec83a0264257cd6cabaa299ec2e7eb59", + "parent_gene": "", + "protein_md5": "aa212907f314017af7197509ecdb308b", + "protein_translation": "MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRISELENRSTEIKKQPDPETLPPTL", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009992" + ], + [ + "gene_synonym", + "ECK3034" + ], + [ + "gene_synonym", + "EcoGene:EG12363" + ], + [ + "gene_synonym", + "GI:16130939" + ], + [ + "gene_synonym", + "GeneID:947522" + ], + [ + "gene_synonym", + "JW3011" + ], + [ + "gene_synonym", + "NP_417515.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39834" + ], + [ + "gene_synonym", + "b3043" + ], + [ + "gene_synonym", + "ygiL" + ] + ], + "dna_sequence": "ATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGTAAATCTGGGTGAAGTAGCAGATACCGTACTGAAAAGCGATCAGAAATCTTTGGCTGAACCTTTCACTATTCACCTGCAGGACTGCATGCTGAGTCAGGGTGGAACTACTTATTCAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAA", + "dna_sequence_length": 552, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2992", + "location": [ + [ + "NC_000913", + 3185414, + "+", + 552 + ] + ], + "md5": "7ad46f3a45d7d6b2c01ce7ea4e4cc0da", + "parent_gene": "", + "protein_md5": "22384031d28e470141f123b8f993dcd1", + "protein_translation": "MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010001" + ], + [ + "gene_synonym", + "ECK3035" + ], + [ + "gene_synonym", + "EcoGene:EG14228" + ], + [ + "gene_synonym", + "GeneID:947529" + ], + [ + "gene_synonym", + "JW5507" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76655" + ], + [ + "gene_synonym", + "b3046" + ], + [ + "gene_synonym", + "yqiG" + ] + ], + "dna_sequence": "TTGATTAAAAATATTTATTGTTCATTATCCGTTATCATCATTGGTTGTGCGTCAGCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGAATCCTCTATTTTCGACTCTTTCCATTTTTCTGGCATTTCGTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACTTGACGTCAAGGTTGAAGAAGAGGACGGACGCGTTACGCAATGGCAAGTTGCATCTAATAGTATTCCTTATCTGACGCGTAAAGGGCAGATTCGCTACACCACTGCTATGGGTAAACCGACCAGCGTTGGTGGTGATTCCTTACAACAACCCTTCTTCTGGACTGGTGAATTCTCATGGGGTTGGCTGAACAATGTATCCCTGTATGGTGGTTCAGTTTTAACAAACCGTGATTATCAATCTCTGGCTGCCGGCGTTGGTTTTAATCTTAACTCATTAGGTTCATTATCTTTTGATGTCACACGATCTGATGCTCAGTTGCATAATCAGGATAAAGAAACGGGTTATAGCTACCGCGCTAACTATTCAAAACGTTTTGAATCTACCGGTAGCCAGCTCACTTTCGCTGGTTACCGTTTCTCTGATAAAAACTTTGTGACAATGAATGAATATATCAATGACACTAACCATTACACGAATTATCAGAATGAAAAAGAGAGTTATATTGTCACGTTTAACCAGTATCTTGAATCATTAAGGTTAAATACATACGTAAGTTTGGCTCGTAATACTTACTGGGACGCCAGCAGTAATGTGAATTATTCATTATCACTTAGCCGCGATTTTGATATCGGGCCATTAAAAAACGTCTCCACTTCTCTAACATTTAGCCGAATAAACTGGGAAGAAGACAACCAGGATCAACTGTACCTAAATATTTCGATTCCCTGGGGAACTAGTAGAACATTGAGCTATGGTATGCAACGAAATCAGGATAATGAGATTTCGCATACTGCTTCGTGGTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGAAATCTGCCAGAAAATGTGGATATCGAAAACTCGGTTATCACCACCACCTTAACCGAGGGTGCTATTGGCTACGCCAAACTTGATACCCGCAAGGGCTACCAAATCATAGGGGTTATTCGCCTGGCAGATGGTAGTCATCCACCACTGGGGATTAGCGTAAAAGATGAAACCAGCCACAAAGAATTAGGACTGGTTGCTGATGGCGGCTTTGTATACCTCAACGGCATTCAGGATGATAACAAACTTGCTTTACGCTGGGGTGACAAATCTTGTTTTATTCAACCACCCAATAGCAGCAACTTAACCACCGGAACGGCTATTTTACCGTGTATTAGCCAAAATTAA", + "dna_sequence_length": 2469, + "id": "CDS_2993", + "location": [ + [ + "NC_000913", + 3186061, + "+", + 30 + ], + [ + "NC_000913", + 3187427, + "+", + 2439 + ] + ], + "md5": "71364628e1a126a2da81d4e026e48dcb", + "parent_gene": "", + "protein_md5": "1deb1d6e718281f41cb32ba52ff1fab3", + "protein_translation": "LIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHLDLQWVLIDNQTAVCVTPEQLTLLGFTDEFIEKTQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWNHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQATNLDFPRIYLFRPIPAMNAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDAQLHNQDKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEEDNQDQLYLNISIPWGTSRTLSYGMQRNQDNEISHTASWYDSSDRNNSWSVSASGDNDEFKDMKASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDADGTEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTRNLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIIGVIRLADGSHPPLGISVKDETSHKELGLVADGGFVYLNGIQDDNKLALRWGDKSCFIQPPNSSNLTTGTAILPCISQN", + "protein_translation_length": 822, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009997" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698309" + ], + [ + "gene_synonym", + "GeneID:947520" + ], + [ + "gene_synonym", + "NP_417516.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF44" + ], + [ + "gene_synonym", + "b3044" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_2994", + "location": [ + [ + "NC_000913", + 3186187, + "+", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009999" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16130941" + ], + [ + "gene_synonym", + "GeneID:947517" + ], + [ + "gene_synonym", + "NP_417517.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF57" + ], + [ + "gene_synonym", + "b3045" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_2995", + "location": [ + [ + "NC_000913", + 3186510, + "+", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010003" + ], + [ + "gene_synonym", + "ECK3036" + ], + [ + "gene_synonym", + "EcoGene:EG14229" + ], + [ + "gene_synonym", + "GI:90111532" + ], + [ + "gene_synonym", + "GeneID:947531" + ], + [ + "gene_synonym", + "JW5508" + ], + [ + "gene_synonym", + "NP_417519.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77616" + ], + [ + "gene_synonym", + "b3047" + ], + [ + "gene_synonym", + "yqiH" + ] + ], + "dna_sequence": "ATGCGCTACTTAAATACAAAGAATATCATTGCAGCAGGAGTATTACTCTCCTGTATGAGCAGCATTGCCTGGGGTGCCATCATCCCGGATCGTACCCGTATCATAATGAATGAGTCAGATAAAGGCGAAGCATTAAAACTTACTAATCAAAGTAAAAACCTGCCCTATCTGGCCCAAACATGGATAGAAGATACGAAAGGCAATAAATCGCGTGACTTTATTGTCACTGTTCCTCCAATGGTGCGTTTAAATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCATTGAATTAGAAGACGATGGGGTAATGACTTACGAAAAAGTTGAAATCATTCGTAGAAATGACGGTTCGATCCGCTTTAACAATAAGATGCCTTATCACGTTACGCTGGGTTATATCGGAACAAATGGGGTAACGATGTTACCACAAACGCAAAGCTTAATGGTAACCCCTTTTAGCTATGCAAATACGCAGTTTAAAAATGTTCCGTCAACTTTTCAGGTGGGTTATATCAATGACTTTGGTGGATTAAGTTTTTATGAAATAAACTGCCCTGTAGTAAATAACATTTGTAATATTTCTGTAGCCAACCGAGATCAATAA", + "dna_sequence_length": 750, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_2996", + "location": [ + [ + "NC_000913", + 3189881, + "+", + 750 + ] + ], + "md5": "9a8953a83c9f55570f83050b474c3c4c", + "parent_gene": "", + "protein_md5": "8930e1438de858b670ce6c356df16064", + "protein_translation": "MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSYANTQFKNVPSTFQVGYINDFGGLSFYEINCPVVNNICNISVANRDQ", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010005" + ], + [ + "gene_synonym", + "ECK3037" + ], + [ + "gene_synonym", + "EcoGene:EG14230" + ], + [ + "gene_synonym", + "GI:16130944" + ], + [ + "gene_synonym", + "GeneID:947535" + ], + [ + "gene_synonym", + "JW5509" + ], + [ + "gene_synonym", + "NP_417520.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76656" + ], + [ + "gene_synonym", + "b3048" + ], + [ + "gene_synonym", + "yqiI" + ] + ], + "dna_sequence": "ATGCGCTACTTGTTAATTGTTATTACTTTTTTTATGGGTTTTAGTTCATTACCTGCATGGGCAATGGACTGCTATGCTGAACATGAAGGTGGAAATACCGTTGTCATTGGTTACGTACCAAGAATCTCTATCCCCAGCGATGGTAAAAAAGGTGATAAAATCTGGCAAAGCAGTGAATATTTTATGAATGTTTTCTGTAATAATGCACTACCAGGCCCATCTCCAGGAGAAGAATACCCATCTGCATGGGCAAATATAATGATGTTGTTAGCATCAGGTCAAGACTTTTATAATCAAAACTCTTATACTTTCGGTGTAACTTATAATGGGGTTGATTATGATTCTACATCTCCACTACCTATTGCAGCACCTGTATGTATTGATATAAAGGGAGCCGGAACCTTCGGGAATGGCTACAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGTGCTATAGAAGTAGATAAAAATCTGACCTTCAGGATTCGCGGATTAAATAACATTCATGTCCTTGACTGCTTTGTTAATGTTGATCTGGAACCAGCTGATGGCGTTGTCGACTTTGGTAAAATAAATTCCCGAACAATTAAAAATACCAGCGTGAGTGAGACGTTTAGCGTAGTCATGACCAAAGATCCGGGTGCGGCCTGTACTGAGCAGTTTAATATTTTAGGGAGTTTTTTCACTACGGATATTTTGAGTGATTATAGCCATCTGGATATAGGTAATGGTCTGCTATTGAAGATATTTCATAACGATGGAACAGCAACGGAATTTAACCGCTTCTCACAATTTGCTTCTTTTTCATCGTCTAGTGCGCCTTCGGTCACCGCACCATTCAGGGCAGAACTGAGTGCGAACCCGGCAGAAACGGTTGTTGAGGGACCGTTTAGTAAAGACGTAATCCTGAAAATCACCTATAACTAG", + "dna_sequence_length": 1065, + "functions": [ + "fimbrial protein" + ], + "id": "CDS_2997", + "location": [ + [ + "NC_000913", + 3190632, + "+", + 1065 + ] + ], + "md5": "224e4b5474e3257d7a3650a1d06c87e1", + "parent_gene": "", + "protein_md5": "81225be9a54653003656bd9e22a4d586", + "protein_translation": "MRYLLIVITFFMGFSSLPAWAMDCYAEHEGGNTVVIGYVPRISIPSDGKKGDKIWQSSEYFMNVFCNNALPGPSPGEEYPSAWANIMMLLASGQDFYNQNSYTFGVTYNGVDYDSTSPLPIAAPVCIDIKGAGTFGNGYKKPAVCSGGPEPQLSVTFPVRVQLYIKLAKNANKVNKKLVLPDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLDCFVNVDLEPADGVVDFGKINSRTIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDIGNGLLLKIFHNDGTATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010007" + ], + [ + "gene_synonym", + "ECK3038" + ], + [ + "gene_synonym", + "EcoGene:EG11381" + ], + [ + "gene_synonym", + "GI:16130945" + ], + [ + "gene_synonym", + "GeneID:947533" + ], + [ + "gene_synonym", + "JW3021" + ], + [ + "gene_synonym", + "NP_417521.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26649" + ], + [ + "gene_synonym", + "b3049" + ], + [ + "gene_synonym", + "glgS" + ], + [ + "gene_synonym", + "scoR" + ] + ], + "dna_sequence": "ATGGATCATAGTCTTAATTCTTTAAATAATTTCGATTTCCTGGCGCGTAGTTTTGCCAGAATGCACGCAGAAGGTCGCCCGGTCGATATTCTGGCCGTTACTGGTAACATGGATGAAGAACATAGAACCTGGTTTTGCGCACGTTATGCCTGGTATTGTCAACAGATGATGCAGGCAAGAGAGCTGGAGTTAGAGCACTGA", + "dna_sequence_length": 201, + "functions": [ + "motility and biofilm regulator" + ], + "id": "CDS_2998", + "location": [ + [ + "NC_000913", + 3191939, + "-", + 201 + ] + ], + "md5": "2b556b910c4da380297735e0217c25b1", + "parent_gene": "", + "protein_md5": "28efdce60777854550935d65f4c0e5f5", + "protein_translation": "MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010011" + ], + [ + "gene_synonym", + "ECK3039" + ], + [ + "gene_synonym", + "EcoGene:EG14231" + ], + [ + "gene_synonym", + "GI:16130946" + ], + [ + "gene_synonym", + "GeneID:947530" + ], + [ + "gene_synonym", + "JW3022" + ], + [ + "gene_synonym", + "NP_417522.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76657" + ], + [ + "gene_synonym", + "b3050" + ], + [ + "gene_synonym", + "yqiJ" + ] + ], + "dna_sequence": "ATGATTTTATTCGCCGACTATAACACCCCTTATCTTTTCGCTATTTCCTTTGTACTGTTGATCGGCCTGTTAGAAATTTTTGCGCTTATCTGCGGTCACATGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGTTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTAAAATAGTTGCGCCCTGGATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACTACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAA", + "dna_sequence_length": 630, + "functions": [ + "DUF1449 family inner membrane protein" + ], + "id": "CDS_2999", + "location": [ + [ + "NC_000913", + 3192208, + "+", + 630 + ] + ], + "md5": "a594d889d768d3790d1bc2d1f246874d", + "parent_gene": "", + "protein_md5": "0087e1591cf4e7494fadfb8076c46772", + "protein_translation": "MILFADYNTPYLFAISFVLLIGLLEIFALICGHMLSGALDAHLDHYDSITTGHISQALHYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLFVVPVSLLFTIIAVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKIFTKGDKVLIICRLSATRYLAENNPWPQIL", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010013" + ], + [ + "gene_synonym", + "ECK3040" + ], + [ + "gene_synonym", + "EcoGene:EG14232" + ], + [ + "gene_synonym", + "GI:16130947" + ], + [ + "gene_synonym", + "GeneID:947537" + ], + [ + "gene_synonym", + "JW3023" + ], + [ + "gene_synonym", + "NP_417523.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77306" + ], + [ + "gene_synonym", + "b3051" + ], + [ + "gene_synonym", + "yqiK" + ] + ], + "dna_sequence": "ATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAGCTTTTGTTCGTACTGGTTTAGGTGGGCAAAAAGTGGTAATGAGCGGTGGCGCAATCGTGATGCCGATCTTTCATGAAATAATCCCCATCAATATGAATACTCTGAAGCTGGAAGTCAGCCGCTCAACCATTGATAGCCTGATTACGAAAGATCGTATGCGCGTCGATGTAGTAGTCGCTTTCTTTGTGCGGGTAAAACCTTCAGTAGAAGGGATTGCCACCGCTGCCCAGACGCTGGGGCAACGCACCCTGTCGCCTGAAGACTTACGTATGTTGGTTGAAGATAAATTTGTCGATGCCCTCCGTGCAACAGCTGCGCAAATGACCATGCATGAGTTACAGGATACCCGCGAGAACTTTGTGCAGGGGGTGCAAAATACAGTGGCAGAAGACCTGTCGAAAAACGGTCTGGAACTGGAGAGCGTTTCACTTACCAACTTTAACCAGACCTCGAAAGAACATTTCAATCCGAACAATGCCTTTGACGCCGAAGGTTTAACCAAACTGACTCAGGAAACAGAGCGCCGTCGCCGCGAACGTAACGAAGTTGAACAGGATGTAGAAGTTGCGGTGCGTGAAAAAAATCGCGATGCGCTATCGCGCAAGCTGGAGATTGAACAGCAAGAAGCGTTTATGACGCTTGAGCAGGAGCAGCAGGTTAAAACCCGTACTGCCGAACAGAATGCACGTATTGCGGCTTTTGAAGCTGAACGTCGTCGTGAAGCAGAGCAGACACGAATTCTGGCTGAACGACAGATTCAGGAAACAGAAATCGACCGCGAACAGGCCGTCCGCTCAAGAAAGGTTGAAGCTGAACGTGAAGTTCGCATTAAAGAGATCGAACAGCAGCAGGTCACCGAAATCGCTAACCAGACGAAATCGATCGCTATTGCCGCCAAATCGGAACAACAGTCCCAGGCAGAAGCGCGTGCTAATCTCGCACTTGCAGAAGCGGTAAGCGCCCAACAAAACGTAGAAACCACTCGCCAGACTGCCGAAGCCGATCGTGCTAAACAAGTTGCCCTAATCGCTGCCGCGCAGGATGCAGAAACCAAAGCGGTTGAACTGACCGTGCGGGCGAAAGCAGAAAAAGAAGCCGCAGAGATGCAGGCGGCGGCTATCGTTGAGTTAGCCGAAGCTACACGTAAAAAGGGTCTGGCGGAAGCAGAAGCACAACGTGCGCTGAACGATGCTATCAACGTACTTTCTGATGAACAAACCAGCCTTAAATTCAAACTGGCCTTGTTGCAGGCGCTGCCTGCGGTAATAGAGAAATCCGTTGAGCCGATGAAGTCAATCGACGGTATCAAGATTATTCAGGTCGATGGTCTGAATCGTGGCGGCGCTGCGGGTGATGCAAACACGGGTAATGTGGGGGGCGGAAACCTGGCGGAACAAGCATTATCAGCCGCTCTCTCTTACCGCACACAGGCACCGCTGATTGACTCCTTGCTCAATGAAATTGGCGTTTCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAA", + "dna_sequence_length": 1662, + "functions": [ + "PHB family membrane protein, function unknown" + ], + "id": "CDS_3000", + "location": [ + [ + "NC_000913", + 3192864, + "+", + 1662 + ] + ], + "md5": "c0919c4265a51269cf0bf0eace2a7705", + "parent_gene": "", + "protein_md5": "5b22fdb04c725f0c1ccf778d2343a6d0", + "protein_translation": "MDDIVNSVPSWMFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIDREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQVDGLNRGGAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTSPLTSTTPVEEKAE", + "protein_translation_length": 553, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4479" + ], + [ + "gene_synonym", + "EcoGene:EG14469" + ], + [ + "gene_synonym", + "GI:226524748" + ], + [ + "gene_synonym", + "GeneID:7751628" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P616" + ], + [ + "gene_synonym", + "YP_002791256.1" + ], + [ + "gene_synonym", + "b4664" + ], + [ + "gene_synonym", + "ibsD" + ] + ], + "dna_sequence": "ATGATGAAGCTCGTCATCATACTGATTGTGTTGTTACTCGTAAGTTTCGCAGCTTATTAA", + "dna_sequence_length": 60, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_3001", + "location": [ + [ + "NC_000913", + 3194766, + "+", + 60 + ] + ], + "md5": "bac993dd3e275bd0a51559420f863574", + "parent_gene": "", + "protein_md5": "37f29d5dbc728f9f12b58c85d6a433bd", + "protein_translation": "MMKLVIILIVLLLVSFAAY", + "protein_translation_length": 19, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4481" + ], + [ + "gene_synonym", + "EcoGene:EG14471" + ], + [ + "gene_synonym", + "GI:226524749" + ], + [ + "gene_synonym", + "GeneID:7751629" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P617" + ], + [ + "gene_synonym", + "YP_002791257.1" + ], + [ + "gene_synonym", + "b4666" + ], + [ + "gene_synonym", + "ibsE" + ] + ], + "dna_sequence": "ATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTAA", + "dna_sequence_length": 60, + "functions": [ + "toxic membrane protein" + ], + "id": "CDS_3002", + "location": [ + [ + "NC_000913", + 3195141, + "+", + 60 + ] + ], + "md5": "76c01877bd7842a1d6f34f535bc73cc2", + "parent_gene": "", + "protein_md5": "d6fe31d1d290860bc730efff7b068c24", + "protein_translation": "MMKLVIILVVLLLLSFPTY", + "protein_translation_length": 19, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010015" + ], + [ + "gene_synonym", + "ECK3042" + ], + [ + "gene_synonym", + "EcoGene:EG13416" + ], + [ + "gene_synonym", + "GI:16130948" + ], + [ + "gene_synonym", + "GeneID:947548" + ], + [ + "gene_synonym", + "JW3024" + ], + [ + "gene_synonym", + "NP_417524.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76658" + ], + [ + "gene_synonym", + "b3052" + ], + [ + "gene_synonym", + "gmhC" + ], + [ + "gene_synonym", + "hldE" + ], + [ + "gene_synonym", + "rfaE" + ], + [ + "gene_synonym", + "waaE" + ], + [ + "gene_synonym", + "yqiF" + ] + ], + "dna_sequence": "ATGAAAGTAACGCTGCCAGAGTTTGAACGTGCAGGAGTGATGGTGGTTGGTGATGTGATGCTGGATCGTTACTGGTACGGCCCCACCAGTCGTATCTCGCCGGAAGCGCCGGTGCCCGTGGTTAAAGTGAATACCATCGAAGAACGTCCGGGCGGCGCGGCTAACGTGGCGATGAATATCGCTTCTCTCGGTGCTAATGCACGCCTGGTCGGGTTGACGGGCATTGACGATGCAGCGCGCGCGCTGAGTAAATCTCTGGCCGACGTCAACGTCAAATGCGACTTCGTTTCTGTACCGACGCATCCGACCATTACCAAATTACGGGTACTTTCCCGCAACCAACAGCTGATCCGTCTGGATTTTGAAGAAGGTTTCGAAGGTGTTGATCCGCAGCCGCTGCACGAGCGGATTAATCAGGCGCTGAGTTCGATTGGCGCGCTGGTGCTTTCTGACTACGCCAAAGGTGCGCTGGCAAGCGTACAGCAGATGATCCAACTGGCGCGTAAAGCGGGTGTTCCGGTGCTGATTGATCCAAAAGGTACCGATTTTGAGCGCTACCGCGGCGCTACGCTGTTAACGCCGAATCTCTCGGAATTTGAAGCTGTTGTCGGTAAATGTAAGACCGAAGAAGAGATTGTTGAGCGCGGCATGAAACTGATTGCCGATTACGAACTCTCGGCTCTGTTAGTGACCCGTTCCGAACAGGGTATGTCGCTGCTGCAACCGGGTAAAGCGCCGCTGCATATGCCAACCCAAGCGCAGGAAGTGTATGACGTTACCGGTGCGGGCGACACGGTGATTGGCGTCCTGGCGGCAACGCTGGCAGCGGGTAATTCGCTGGAAGAAGCCTGCTTCTTTGCCAATGCGGCGGCTGGCGTGGTGGTCGGCAAACTGGGAACCTCCACGGTTTCGCCGATCGAGCTGGAAAATGCTGTACGTGGACGTGCAGATACAGGCTTTGGCGTGATGACCGAAGAGGAACTGAAGCTGGCCGTAGCGGCAGCGCGTAAACGTGGTGAAAAAGTGGTGATGACCAACGGTGTCTTTGACATCCTGCACGCCGGGCACGTCTCTTATCTGGCAAATGCCCGCAAGCTGGGTGACCGCTTGATTGTTGCCGTCAACAGCGATGCCTCCACCAAACGGCTGAAAGGGGATTCCCGCCCGGTAAACCCACTCGAACAGCGTATGATTGTGCTGGGCGCACTGGAAGCGGTCGACTGGGTAGTGTCGTTTGAAGAGGACACGCCGCAGCGCTTGATCGCCGGGATCTTGCCAGATCTGCTGGTGAAAGGCGGCGACTATAAACCAGAAGAGATTGCCGGGAGTAAAGAAGTCTGGGCCAACGGTGGCGAAGTGTTGGTGCTCAACTTTGAAGACGGTTGCTCGACGACCAACATCATCAAGAAGATCCAACAGGATAAAAAAGGCTAA", + "dna_sequence_length": 1434, + "functions": [ + "heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase" + ], + "id": "CDS_3003", + "location": [ + [ + "NC_000913", + 3196753, + "-", + 1434 + ] + ], + "md5": "366bc6b9cc1507fd8fe6b79cb9406f6f", + "parent_gene": "", + "protein_md5": "8c74d913e2fc37c6a6d92d97771b0e31", + "protein_translation": "MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVNTIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASVQQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMKLIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAAARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNFEDGCSTTNIIKKIQQDKKG", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010018" + ], + [ + "gene_synonym", + "ECK3043" + ], + [ + "gene_synonym", + "EcoGene:EG11602" + ], + [ + "gene_synonym", + "GI:16130949" + ], + [ + "gene_synonym", + "GeneID:947552" + ], + [ + "gene_synonym", + "JW3025" + ], + [ + "gene_synonym", + "NP_417525.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30870" + ], + [ + "gene_synonym", + "b3053" + ], + [ + "gene_synonym", + "glnE" + ] + ], + "dna_sequence": "ATGAAGCCGCTCTCTTCACCGTTACAGCAGTACTGGCAGACCGTTGTTGAGCGGCTGCCAGAGCCTTTAGCCGAGGAATCACTTAGCGCACAGGCGAAGTCAGTACTTACTTTTAGTGATTTTGTGCAGGACAGCGTGATTGCGCATCCAGAGTGGCTGACGGAACTGGAAAGCCAACCGCCGCAGGCCGACGAATGGCAGCATTACGCGGCATGGTTGCAGGAGGCGCTCTGTAATGTGAGTGACGAAGCCGGGTTAATGCGCGAGCTGCGGCTATTCCGGCGGCGCATTATGGTGCGCATCGCCTGGGCGCAAACGCTGGCACTGGTTACTGAAGAGAGCATATTGCAGCAGCTCAGCTATCTGGCGGAGACGCTGATTGTTGCGGCGCGTGACTGGCTGTATGACGCCTGCTGCCGCGAGTGGGGAACGCCGTGCAATGCGCAGGGCGAAGCGCAACCGCTGCTGATTTTAGGCATGGGTAAGCTGGGCGGTGGGGAGCTGAATTTCTCCTCTGATATCGATCTGATTTTTGCCTGGCCGGAACATGGTTGTACGCAGGGTGGACGCCGGGAACTGGATAACGCGCAGTTTTTTACCCGCATGGGGCAGCGGCTGATTAAAGTGCTGGATCAACCAACGCAGGATGGCTTCGTCTATCGCGTGGATATGCGGCTGCGTCCGTTTGGCGAAAGTGGCCCGCTGGTGCTGAGCTTTGCCGCGTTGGAAGATTATTACCAGGAGCAGGGGCGCGACTGGGAGCGTTACGCGATGGTCAAGGCGCGGATTATGGGCGATAGCGAAGGCGTCTATGCTAACGAGTTGCGTGCGATGCTGCGCCCGTTTGTTTTCCGTCGTTACATCGATTTCAGCGTGATTCAGTCGCTGCGCAACATGAAAGGGATGATTGCCCGTGAAGTGCGTCGACGTGGTTTGACCGACAATATCAAACTCGGCGCAGGCGGCATTCGCGAAATTGAATTTATCGTTCAGGTGTTCCAGCTCATTCGCGGCGGACGCGAACCGTCGCTGCAATCGCGCTCTTTACTGCCAACGCTCAGCGCCATTGCCGAGCTGCATCTGCTTTCTGAAAACGATGCTGAACAATTGCGAGTGGCGTATCTGTTCCTGCGGCGTCTGGAAAACCTGCTGCAAAGCATTAACGACGAACAAACCCAGACGCTTCCTTCTGATGAGCTTAATCGTGCGCGGCTGGCGTGGGCGATGGACTTTGCTGACTGGCCGCAACTGACCGGGGCGCTGACCGCACATATGACCAATGTGCGCCGGGTGTTTAATGAATTGATTGGCGACGATGAAAGTGAAACTCAGGAAGAGTCGCTGTCGGAACAGTGGCGTGAGCTGTGGCAGGATGCGTTGCAGGAAGATGACACTACGCCAGTGCTGGCGCATCTTAGCGAGGATGATCGCAAACAGGTGCTAACGCTGATTGCCGATTTCCGCAAAGAGCTGGATAAGCGCACCATCGGGCCGCGAGGACGTCAGGTGCTCGACCATCTGATGCCGCATCTGCTAAGTGATGTCTGTGCGCGTGAAGACGCTGCCGTTACGCTGTCGCGCATTACCGCCTTGCTGGTGGGGATTGTTACCCGCACCACCTATTTAGAATTGCTCAGTGAATTCCCCGCGGCGCTTAAACATTTGATTTCTCTGTGTGCCGCGTCGCCGATGATTGCCAGCCAGCTGGCGCGTTATCCATTATTGCTGGATGAATTGCTCGATCCAAACACCCTTTACCAGCCGACGGCGACCGATGCCTACCGCGATGAGTTGCGCCAGTATTTGCTGCGCGTGCCGGAAGATGACGAAGAGCAACAGCTTGAGGCGCTGCGTCAGTTCAAACAGGCGCAGCTGTTACGCATCGCCGCAGCGGATATCGCCGGTACGCTACCGGTGATGAAAGTGAGCGATCACTTAACCTGGCTGGCGGAAGCCATGATAGATGCCGTCGTTCAGCAGGCGTGGGTTCAAATGGTTGCCCGCTACGGTAAGCCGAATCACCTGAACGAACGCGAAGGGCGTGGTTTTGCGGTGGTCGGCTACGGCAAGCTGGGCGGCTGGGAGTTAGGCTACAGTTCCGATCTTGACCTTATCTTCCTCCATGATTGCCCAATGGATGCGATGACTGACGGTGAGCGGGAAATCGACGGGCGGCAGTTTTATCTGCGTCTGGCGCAACGCATTATGCATCTGTTCAGTACGCGTACCTCTTCCGGCATTTTGTATGAAGTGGATGCTCGACTGCGTCCGTCCGGGGCGGCGGGAATGCTGGTGACATCCGCAGAAGCATTTGCCGATTATCAGAAAAACGAGGCCTGGACGTGGGAACATCAGGCGCTGGTGCGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAACATCGCGATCGCTTTGATATCAAAGCTGATGAAGGGGGAATTACCGATATCGAATTTATTACCCAATATCTGGTGTTGCGCTACGCTCATGAAAAACCGAAGTTAACGCGCTGGTCAGACAACGTGCGTATTCTGGAACTACTGGCGCAAAACGACATTATGGAAGAGCAGGAAGCGATGGCGCTGACCCGTGCTTACACTACGCTTCGCGATGAACTTCATCATCTGGCATTACAGGAATTGCCGGGCCATGTGTCGGAGGATTGCTTCACCGCAGAGCGTGAACTGGTGCGGGCAAGCTGGCAGAAGTGGCTGGTGGAAGAATGA", + "dna_sequence_length": 2841, + "functions": [ + "fused deadenylyltransferase/adenylyltransferase for glutamine synthetase" + ], + "id": "CDS_3004", + "location": [ + [ + "NC_000913", + 3199641, + "-", + 2841 + ] + ], + "md5": "d42287ee5be714c811d38b3ed378f910", + "parent_gene": "", + "protein_md5": "0476e1bcd0784659ebabe04cc3102575", + "protein_translation": "MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQPPQADEWQHYAAWLQEALCNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERELVRASWQKWLVEE", + "protein_translation_length": 946, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010020" + ], + [ + "gene_synonym", + "ECK3044" + ], + [ + "gene_synonym", + "EcoGene:EG11603" + ], + [ + "gene_synonym", + "GI:16130950" + ], + [ + "gene_synonym", + "GeneID:947554" + ], + [ + "gene_synonym", + "JW3026" + ], + [ + "gene_synonym", + "NP_417526.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30871" + ], + [ + "gene_synonym", + "b3054" + ], + [ + "gene_synonym", + "ygiF" + ] + ], + "dna_sequence": "ATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCCGTTGAGGCGTTGCGTGACCATCTCAATACGCTGGGCGGCGAGCACCATGACCCCGTGCAGTTGCTGAATATTTACTACGAAACGCCGGATAACTGGCTGCGTGGGCACGATATGGGCTTACGTATTCGTGGCGAAAACGGTCGCTATGAGATGACCATGAAAGTTGCAGGAAGAGTGACAGGCGGCTTACATCAGCGCCCGGAATATAACGTGGCGTTGAGCGAACCGACGCTCGACCTGGCGCAGTTACCGACGGAAGTCTGGCCGAACGGCGAATTGCCCGCCGATCTCGCCTCCCGCGTGCAGCCGCTGTTCAGCACCGATTTTTATCGCGAAAAATGGCTGGTGGCGGTCGATGGTAGCCAAATTGAAATCGCCCTCGACCAGGGGGAAGTGAAAGCGGGTGAATTTGCTGAACCTATCTGTGAGCTGGAACTGGAACTGCTTAGCGGCGACACGCGCGCGGTGCTGAAACTGGCGAACCAACTGGTATCGCAAACCGGATTACGCCAGGGCAGCCTGAGCAAAGCGGCGCGTGGCTATCATCTGGCGCAGGGCAATCCGGCGCGTGAAATCAAACCGACCACCATTTTGCATGTTGCGGCAAAAGCCGATGTGGAACAGGGGCTGGAAGCGGCGCTCGAGCTGGCGTTAGCGCAATGGCAGTATCATGAAGAACTGTGGGTACGCGGCAACGATGCGGCGAAAGAACAGGTGCTGGCAGCCATTAGCCTGGTCCGTCATACGCTGATGCTGTTCGGTGGTATTGTGCCGCGTAAAGCGAGCACTCACTTACGTGATCTGCTGACTCAATGCGAGGCGACCATTGCTTCTGCGGTGTCTGCCGTGACGGCGGTCTACTCTACCGAAACGGCAATGGCGAAGCTGGCGTTGACCGAATGGTTGGTAAGCAAAGCATGGCAGCCATTTTTAGATGCCAAAGCGCAGGGCAAAATCAGCGACTCCTTCAAACGCTTTGCCGATATCCATCTTTCCCGCCATGCCGCTGAACTGAAAAGCGTTTTCTGCCAGCCGTTAGGCGATCGCTACCGTGACCAGTTGCCACGCCTGACGCGTGATATTGACTCAATACTGTTGCTGGCGGGTTACTATGATCCTGTCGTCGCGCAAGCCTGGCTGGAGAACTGGCAGGGGCTGCATCACGCTATTGCGACCGGGCAACGCATCGAAATTGAACATTTCCGTAATGAGGCAAACAATCAGGAACCGTTCTGGTTGCACAGCGGAAAACGTTAA", + "dna_sequence_length": 1302, + "functions": [ + "inorganic triphosphatase" + ], + "id": "CDS_3005", + "location": [ + [ + "NC_000913", + 3200965, + "-", + 1302 + ] + ], + "md5": "ddbc51b400e3dea4a493b8d3c83a2981", + "parent_gene": "", + "protein_md5": "9ee5e8cd4a58fd0545db42b085d37a2e", + "protein_translation": "MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR", + "protein_translation_length": 433, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010028" + ], + [ + "gene_synonym", + "ECK3045" + ], + [ + "gene_synonym", + "EcoGene:EG12434" + ], + [ + "gene_synonym", + "GI:16130951" + ], + [ + "gene_synonym", + "GeneID:947555" + ], + [ + "gene_synonym", + "JW3027" + ], + [ + "gene_synonym", + "NP_417527.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADT8" + ], + [ + "gene_synonym", + "b3055" + ], + [ + "gene_synonym", + "ecfG" + ], + [ + "gene_synonym", + "htrG" + ], + [ + "gene_synonym", + "ygiM" + ] + ], + "dna_sequence": "ATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCACCGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGATCAACGGGTTAAAAGAAGAAAATCAGAAACTGAAAAACGAGCTGATTGTCGCGCAGAAAAAGGTCGATGCCGCCAGCGTACAGCTGGATGACAAACAGCGCACCATCATCATGCAATGGTTTATGTATGGCGGTGGCGTGCTGGGGCTTGGCTTGCTGCTCGGTCTGGTACTGCCGCACCTGATCCCAAGCCGCAAACGCAAAGATCGCTGGATGAACTAA", + "dna_sequence_length": 621, + "functions": [ + "SH3 domain protein" + ], + "id": "CDS_3006", + "location": [ + [ + "NC_000913", + 3201207, + "+", + 621 + ] + ], + "md5": "713cb3fc228364fa75e4e19baf9779f6", + "parent_gene": "", + "protein_md5": "588547ef3c4d62c7c322e82d0e2fdbbf", + "protein_translation": "MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010031" + ], + [ + "gene_synonym", + "ECK3046" + ], + [ + "gene_synonym", + "EcoGene:EG10136" + ], + [ + "gene_synonym", + "GI:16130952" + ], + [ + "gene_synonym", + "GeneID:947553" + ], + [ + "gene_synonym", + "JW3028" + ], + [ + "gene_synonym", + "NP_417528.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06961" + ], + [ + "gene_synonym", + "b3056" + ], + [ + "gene_synonym", + "cca" + ] + ], + "dna_sequence": "GTGAAGATTTATCTGGTCGGTGGTGCTGTTCGGGATGCATTGTTAGGGCTACCGGTCAAAGACAGAGATTGGGTGGTGGTCGGCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGTATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAGATGATCTTAAGCGTCGCGATCTGACCATTAATGCGCTGGCCCAGGACGATAACGGCGAGATTATCGACCCGTACAACGGTCTGGGCGATCTGCAAAATCGTCTGTTGCGCCATGTTTCCCCCGCTTTTGGCGAAGATCCGTTACGCGTATTGCGCGTGGCGCGTTTTGCTGCGCGTTATGCCCACCTCGGTTTTCGTATTGCCGATGAAACTCTGGCGTTGATGCGCGAGATGACCCATGCGGGTGAACTGGAACACCTGACGCCTGAACGGGTATGGAAAGAGACGGAAAGCGCCCTCACCACCCGCAATCCACAGGTGTTCTTCCAGGTACTGCGCGATTGCGGCGCACTGCGCGTTTTATTCCCGGAAATTGACGCACTGTTTGGCGTTCCGGCCCCTGCCAAGTGGCATCCGGAAATCGATACGGGTATTCATACCTTAATGACGCTCTCAATGGCGGCGATGCTGAGTCCGCAGGTCGATGTCCGTTTCGCAACTTTATGCCACGATCTCGGTAAAGGGCTGACGCCGCCAGAACTCTGGCCGCGTCATCATGGTCATGGCCCGGCGGGTGTTAAGTTAGTGGAACAACTATGCCAGCGTCTGCGCGTGCCAAATGAAATTCGCGATTTAGCCAGACTGGTGGCTGAGTTTCACGATCTCATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGA", + "dna_sequence_length": 1239, + "functions": [ + "fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase" + ], + "id": "CDS_3007", + "location": [ + [ + "NC_000913", + 3201891, + "+", + 1239 + ] + ], + "md5": "e267eb85f017b9251d2a3bcfaf7d9f36", + "parent_gene": "", + "protein_md5": "4fa5e6dafafe9590ccd7798a2393337e", + "protein_translation": "MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010034" + ], + [ + "gene_synonym", + "ECK3047" + ], + [ + "gene_synonym", + "EcoGene:EG11665" + ], + [ + "gene_synonym", + "GI:16130953" + ], + [ + "gene_synonym", + "GeneID:947551" + ], + [ + "gene_synonym", + "JW3029" + ], + [ + "gene_synonym", + "NP_417529.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60932" + ], + [ + "gene_synonym", + "b3057" + ], + [ + "gene_synonym", + "bacA" + ], + [ + "gene_synonym", + "uppP" + ] + ], + "dna_sequence": "ATGAGCGATATGCACTCGCTGCTGATAGCGGCAATATTGGGTGTGGTCGAAGGATTGACAGAATTTCTGCCGGTATCCAGCACGGGCCATATGATTATTGTCGGTCACTTGTTGGGGTTTGAGGGCGACACGGCGAAAACCTTTGAAGTTGTGATCCAGTTAGGATCAATTCTGGCGGTAGTAGTGATGTTCTGGCGGCGTCTGTTTGGCCTGATTGGCATCCACTTTGGCCGCCCGTTGCAGCACGAAGGTGAAAGCAAAGGTCGTTTAACGCTGATCCACATTTTGCTGGGGATGATTCCGGCGGTGGTATTGGGGCTGTTGTTCCACGACACGATTAAGTCATTGTTTAACCCGATAAATGTGATGTATGCGCTGGTCGTTGGCGGTTTGTTGCTGATTGCCGCCGAATGCCTGAAGCCGAAAGAGCCGCGTGCGCCGGGTCTTGATGATATGACCTATCGTCAGGCATTTATGATTGGCTGTTTCCAGTGTCTGGCGCTGTGGCCGGGTTTCTCCCGTTCCGGGGCGACCATTTCAGGTGGGATGCTGATGGGGGTGAGCCGTTACGCTGCTTCCGAGTTTTCGTTCCTGCTGGCGGTGCCGATGATGATGGGCGCAACGGCGCTCGATCTCTACAAAAGCTGGGGCTTCCTGACAAGCGGCGATATCCCGATGTTTGCCGTTGGGTTTATCACCGCTTTTGTGGTGGCGCTGATAGCGATTAAAACCTTCCTGCAATTGATTAAGCGCATTTCGTTTATCCCGTTCGCCATTTATCGCTTTATTGTGGCGGCTGCGGTGTATGTCGTGTTCTTTTAA", + "dna_sequence_length": 822, + "functions": [ + "undecaprenyl pyrophosphate phosphatase" + ], + "id": "CDS_3008", + "location": [ + [ + "NC_000913", + 3204131, + "-", + 822 + ] + ], + "md5": "cb6e2de58b869a3fafa584362ef63b17", + "parent_gene": "", + "protein_md5": "dd97227bd7ad36ee520e9c6be1a2ffcf", + "protein_translation": "MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTSGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010036" + ], + [ + "gene_synonym", + "ECK3048" + ], + [ + "gene_synonym", + "EcoGene:EG11673" + ], + [ + "gene_synonym", + "GI:90111533" + ], + [ + "gene_synonym", + "GeneID:947544" + ], + [ + "gene_synonym", + "JW3030" + ], + [ + "gene_synonym", + "NP_417530.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC16" + ], + [ + "gene_synonym", + "b3058" + ], + [ + "gene_synonym", + "folB" + ], + [ + "gene_synonym", + "ygiG" + ] + ], + "dna_sequence": "ATGGATATTGTATTTATAGAGCAACTTTCGGTAATCACCACTATTGGTGTTTACGACTGGGAACAGACCATCGAACAGAAGTTAGTGTTCGATATCGAAATGGCGTGGGATAACCGTAAAGCGGCGAAAAGTGATGATGTGGCGGATTGCCTCAGTTACGCTGACATTGCAGAAACGGTGGTCAGCCACGTCGAGGGGGCGCGTTTTGCGCTGGTGGAACGCGTGGCTGAAGAGGTGGCGGAGCTGCTGTTAGCACGCTTCAACTCGCCGTGGGTGCGTATCAAACTCAGCAAGCCAGGCGCAGTGGCGCGGGCGGCGAATGTTGGCGTAATCATTGAGCGTGGCAATAATCTGAAAGAAAATAATTAA", + "dna_sequence_length": 369, + "functions": [ + "dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase" + ], + "id": "CDS_3009", + "location": [ + [ + "NC_000913", + 3204589, + "-", + 369 + ] + ], + "md5": "22c24b1636da58eda324075ad2540700", + "parent_gene": "", + "protein_md5": "e933f38c54e844615df09466b8372c27", + "protein_translation": "MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERGNNLKENN", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010042" + ], + [ + "gene_synonym", + "ECK3049" + ], + [ + "gene_synonym", + "EcoGene:EG11674" + ], + [ + "gene_synonym", + "GI:16130955" + ], + [ + "gene_synonym", + "GeneID:947561" + ], + [ + "gene_synonym", + "JW3031" + ], + [ + "gene_synonym", + "NP_417531.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60782" + ], + [ + "gene_synonym", + "b3059" + ], + [ + "gene_synonym", + "plsY" + ], + [ + "gene_synonym", + "ygiH" + ] + ], + "dna_sequence": "ATGAGTGCAATCGCGCCTGGAATGATCCTCATCGCGTACCTCTGCGGCTCCATTTCCAGTGCCATTCTGGTTTGCCGCTTGTGTGGGCTGCCCGATCCGCGAACCAGCGGCTCCGGCAATCCAGGCGCAACCAATGTGTTACGTATCGGTGGCAAGGGAGCAGCCGTAGCAGTACTGATTTTCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAGTAATGGCGGGAACCTGGTTACTGACCGTGCTATTGAGCGGATACTCGTCGCTGGGAGCGATTGTCAGTGCACTGATTGCTCCGTTTTATGTCTGGTGGTTTAAGCCACAATTCACCTTCCCGGTTTCGATGCTCTCTTGCCTGATCCTGCTGCGTCATCATGACAACATCCAACGTCTGTGGCGTCGTCAGGAGACAAAAATCTGGACGAAATTCAAAAGAAAGCGCGAAAAGGATCCCGAGTGA", + "dna_sequence_length": 618, + "functions": [ + "putative glycerol-3-phosphate acyltransferase" + ], + "id": "CDS_3010", + "location": [ + [ + "NC_000913", + 3204694, + "+", + 618 + ] + ], + "md5": "4a2cae528058f4a71ee0af4459e1556c", + "parent_gene": "", + "protein_md5": "6eef03657d134c52e9725ddeea8523f6", + "protein_translation": "MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010045" + ], + [ + "gene_synonym", + "ECK3050" + ], + [ + "gene_synonym", + "EcoGene:EG12694" + ], + [ + "gene_synonym", + "GI:16130956" + ], + [ + "gene_synonym", + "GeneID:947562" + ], + [ + "gene_synonym", + "JW3032" + ], + [ + "gene_synonym", + "NP_417532.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45463" + ], + [ + "gene_synonym", + "b3060" + ], + [ + "gene_synonym", + "dan" + ], + [ + "gene_synonym", + "ttdR" + ], + [ + "gene_synonym", + "ygiP" + ] + ], + "dna_sequence": "ATGCTGAATAGCTGGCCTTTAGCCAAAGACTTGCAGGTACTGGTAGAAATCGTTCACAGCGGGAGTTTTAGCGCCGCAGCGGCGACGCTTGGGCAGACGCCTGCATTTGTCACCAAGCGGATCCAAATCCTTGAAAATACGCTGGCAACAACGCTGCTGAACCGCTCCGCTCGCGGCGTGGCGCTGACTGAAAGTGGCCAACGTTGTTACGAACATGCGTTGGAAATCCTCACCCAATATCAGCGACTGGTCGATGACGTCACGCAAATCAAAACGCGCCCGGAGGGGATGATTCGTATTGGTTGCAGTTTTGGTTTTGGGCGCAGCCATATTGCGCCAGCTATTACCGAACTGATGCGCAATTATCCTGAGTTACAGGTGCATTTTGAATTGTTCGATCGGCAAATTGATTTAGTGCAGGATAATATTGATCTGGATATTCGTATTAATGACGAAATTCCTGATTATTATATTGCGCATCTTTTGACAAAAAATAAAAGAATATTATGCGCAGCACCTGAGTATCTGCAAAAATATCCGCAGCCACAATCCCTACAGGAATTAAGTCGTCATGACTGTCTGGTGACCAAAGAGCGCGATATGACCCATGGAATATGGGAGTTGGGGAACGGTCAGGAGAAAAAATCGGTGAAGGTAAGCGGGCATCTTTCCTCCAATAGCGGCGAGATTGTGCTGCAATGGGCGCTGGAGGGCAAAGGGATTATGCTGCGTTCCGAGTGGGATGTGTTGCCGTTTCTGGAGAGTGGCAAACTGGTGCAAGTATTGCCAGAGTATGCACAAAGCGCCAATATCTGGGCTGTTTACCGGGAGCCGCTCTATCGCAGCATGAAATTACGTGTCTGCGTGGAATTTCTGGCGGCATGGTGCCAGCAACGGCTGGGCAAGCCCGATGAAGGCTATCAGGTCATGTAG", + "dna_sequence_length": 933, + "functions": [ + "transcriptional activator of ttdABT" + ], + "id": "CDS_3011", + "location": [ + [ + "NC_000913", + 3206256, + "-", + 933 + ] + ], + "md5": "f22bb33d1d28eddb51c92d08da3142cd", + "parent_gene": "", + "protein_md5": "aee953e190201272e2f2d1894dd83040", + "protein_translation": "MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010050" + ], + [ + "gene_synonym", + "ECK3051" + ], + [ + "gene_synonym", + "EcoGene:EG11168" + ], + [ + "gene_synonym", + "GI:16130957" + ], + [ + "gene_synonym", + "GeneID:947565" + ], + [ + "gene_synonym", + "JW3033" + ], + [ + "gene_synonym", + "NP_417533.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05847" + ], + [ + "gene_synonym", + "b3061" + ], + [ + "gene_synonym", + "ttdA" + ], + [ + "gene_synonym", + "ygjA" + ] + ], + "dna_sequence": "ATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATACTCAAACAAGCCGTGGAAGAGGCAACCGTCAAAGCGCCACTACGTCACAATGCGGTAGAAATTTTTGACGAAGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCGTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCATTTTGCGCCCGATTGGCAGCCGCCATCCCAATCCAAAAGCGGCAGAACTGGAGCTACGCCTGGAAGAAGGACTCAACCGTCTGGGGATTGGTCCACAAGGGCTGACCGGCAACAGTTCAGTGATGGGCGTACATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGA", + "dna_sequence_length": 912, + "functions": [ + "L-tartrate dehydratase, alpha subunit" + ], + "id": "CDS_3012", + "location": [ + [ + "NC_000913", + 3206463, + "+", + 912 + ] + ], + "md5": "d70741558c2121847210a929ed2186c3", + "parent_gene": "", + "protein_md5": "be58a2688c8a38b639f154fb0e8f8dc5", + "protein_translation": "MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRSAL", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010052" + ], + [ + "gene_synonym", + "ECK3052" + ], + [ + "gene_synonym", + "EcoGene:EG11169" + ], + [ + "gene_synonym", + "GI:16130958" + ], + [ + "gene_synonym", + "GeneID:947568" + ], + [ + "gene_synonym", + "JW3034" + ], + [ + "gene_synonym", + "NP_417534.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC35" + ], + [ + "gene_synonym", + "b3062" + ], + [ + "gene_synonym", + "ttdB" + ], + [ + "gene_synonym", + "ygjB" + ] + ], + "dna_sequence": "ATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGGCGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGACAGAGCTCGGAATGCCGGAGTCACTGTGGGTCTGCCGGGTCAAAGAGTTCGGCCCGCTGATTGTCTCTATTGATACCCACGGCAACAACCTGATAGCCGAAAACAAAAAGCTGTTCGCCGAACGCCGCGATCCCATCGTGGAAGAGATCTGCGAGCACGTCCATTACATCAAATAA", + "dna_sequence_length": 606, + "functions": [ + "L-tartrate dehydratase, beta subunit" + ], + "id": "CDS_3013", + "location": [ + [ + "NC_000913", + 3207371, + "+", + 606 + ] + ], + "md5": "6cac1026a8c6bfe79774665546ae2ef1", + "parent_gene": "", + "protein_md5": "b9f58c8e73f48c10bddd1dac4690d710", + "protein_translation": "MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010056" + ], + [ + "gene_synonym", + "ECK3053" + ], + [ + "gene_synonym", + "EcoGene:EG12393" + ], + [ + "gene_synonym", + "GI:16130959" + ], + [ + "gene_synonym", + "GeneID:947576" + ], + [ + "gene_synonym", + "JW3035" + ], + [ + "gene_synonym", + "NP_417535.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39414" + ], + [ + "gene_synonym", + "b3063" + ], + [ + "gene_synonym", + "ttdT" + ], + [ + "gene_synonym", + "ygjC" + ], + [ + "gene_synonym", + "ygjE" + ] + ], + "dna_sequence": "ATGAAACCTTCCACTGAATGGTGGCGATATCTTGCGCCGCTGGCGGTCATCGCCATTATTGCTCTACTTCCGGTTCCCGCAGGGCTGGAGAACCATACCTGGCTCTACTTTGCCGTTTTTACTGGCGTGATCGTTGGACTGATCCTCGAACCCGTGCCGGGTGCCGTGGTGGCGATGGTGGGTATATCCATCATCGCCATACTCTCTCCCTGGCTGCTGTTCAGCCCGGAGCAGCTCGCTCAGCCAGGCTTTAAATTCACTGCAAAATCCCTCTCGTGGGCCGTTTCCGGTTTTTCTAATTCGGTTATCTGGCTGATTTTCGCCGCCTTTATGTTTGGCACAGGCTATGAAAAAACCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCGGGATGTTGCCGCTCAGCATTTTACTGGTTCTGCTGGTTCCCTGGCTGGCTTACGTGCTGTACCCGCCGGTACTGAAGTCTGGCGATCAGGTGCCGCGCTGGGCAGAGACGGAACTGCAGGCAATGGGCCCGCTCTGTTCGCGTGAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTCTGGCTGGCCTCGCTTATCACCCTCGCCACCGGACTCAACAACACCGGTTTTATTAGCTGGTTTGGCAAACTGTTAGCAGGCAGCTTAAGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAA", + "dna_sequence_length": 1464, + "functions": [ + "L-tartrate/succinate antiporte" + ], + "id": "CDS_3014", + "location": [ + [ + "NC_000913", + 3208024, + "+", + 1464 + ] + ], + "md5": "9327c03e24b27a37cf9f69c0c0eed33e", + "parent_gene": "", + "protein_md5": "941ca9aeac07a0f01c7a8d98afa84f8f", + "protein_translation": "MKPSTEWWRYLAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL", + "protein_translation_length": 487, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010058" + ], + [ + "gene_synonym", + "ECK3054" + ], + [ + "gene_synonym", + "EcoGene:EG11171" + ], + [ + "gene_synonym", + "GI:16130960" + ], + [ + "gene_synonym", + "GeneID:947578" + ], + [ + "gene_synonym", + "JW3036" + ], + [ + "gene_synonym", + "NP_417536.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05852" + ], + [ + "gene_synonym", + "b3064" + ], + [ + "gene_synonym", + "gcp" + ], + [ + "gene_synonym", + "tsaD" + ], + [ + "gene_synonym", + "ygjD" + ] + ], + "dna_sequence": "ATGCGTGTACTGGGTATTGAAACTTCCTGCGATGAAACCGGCATCGCCATTTACGACGATGAAAAAGGTTTGTTAGCCAACCAATTGTATAGTCAGGTGAAATTGCACGCTGACTACGGCGGCGTCGTGCCTGAACTGGCCTCCCGCGATCATGTGCGTAAAACCGTACCGTTGATCCAGGCGGCGCTAAAGGAGTCTGGTTTAACGGCAAAAGACATTGATGCTGTGGCCTATACCGCAGGCCCTGGATTAGTCGGCGCGCTACTGGTTGGCGCGACCGTGGGGCGTTCTCTGGCGTTTGCCTGGGACGTTCCGGCGATCCCTGTACACCATATGGAAGGGCATCTGTTAGCGCCGATGCTGGAAGATAACCCGCCGGAATTTCCGTTTGTTGCGCTGCTTGTTTCCGGCGGTCATACGCAGTTAATCAGCGTGACTGGCATTGGTCAGTACGAGCTGCTCGGCGAGTCTATCGATGATGCCGCCGGGGAAGCGTTTGATAAAACCGCGAAGCTGCTGGGGCTGGATTATCCTGGCGGGCCGTTACTGTCGAAAATGGCGGCTCAGGGTACTGCCGGGCGCTTTGTCTTCCCGCGTCCGATGACCGACCGTCCGGGGCTGGATTTCAGCTTCTCCGGCCTGAAAACCTTCGCGGCAAATACCATTCGTGACAACGGCACCGACGACCAGACGCGTGCTGATATCGCCCGCGCCTTTGAAGATGCGGTGGTCGATACGCTGATGATTAAGTGCAAGCGGGCGCTGGATCAGACGGGCTTTAAGCGACTGGTCATGGCGGGCGGCGTGAGTGCTAACCGTACGTTACGGGCGAAGCTGGCTGAAATGATGAAAAAACGCCGCGGCGAAGTGTTCTACGCGCGTCCGGAATTTTGTACTGATAACGGCGCGATGATCGCCTATGCCGGAATGGTGCGGTTTAAAGCAGGCGCGACGGCGGATCTCGGCGTTAGCGTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAA", + "dna_sequence_length": 1014, + "functions": [ + "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein", + "glycation binding protein" + ], + "id": "CDS_3015", + "location": [ + [ + "NC_000913", + 3210543, + "-", + 1014 + ] + ], + "md5": "feea18631b8e73408aa959816d3afb9e", + "parent_gene": "", + "protein_md5": "66e6ffda6e7d19a19beada717e5ad830", + "protein_translation": "MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPAA", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010063" + ], + [ + "gene_synonym", + "ECK3055" + ], + [ + "gene_synonym", + "EcoGene:EG10920" + ], + [ + "gene_synonym", + "GI:16130961" + ], + [ + "gene_synonym", + "GeneID:947577" + ], + [ + "gene_synonym", + "JW3037" + ], + [ + "gene_synonym", + "NP_417537.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68679" + ], + [ + "gene_synonym", + "b3065" + ], + [ + "gene_synonym", + "rpsU" + ] + ], + "dna_sequence": "ATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCGAAGAAACTGGCTCGCGAAAACGCACGCCGCACTCGTCTGTACTAA", + "dna_sequence_length": 216, + "functions": [ + "30S ribosomal subunit protein S21" + ], + "id": "CDS_3016", + "location": [ + [ + "NC_000913", + 3210781, + "+", + 216 + ] + ], + "md5": "bce532f52e802a7321862473ade6672e", + "parent_gene": "", + "protein_md5": "e0f63aa874b218a4c9d359851efe3e90", + "protein_translation": "MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY", + "protein_translation_length": 71, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010065" + ], + [ + "gene_synonym", + "ECK3056" + ], + [ + "gene_synonym", + "EcoGene:EG10239" + ], + [ + "gene_synonym", + "GI:16130962" + ], + [ + "gene_synonym", + "GeneID:947570" + ], + [ + "gene_synonym", + "JW3038" + ], + [ + "gene_synonym", + "NP_417538.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABS5" + ], + [ + "gene_synonym", + "b3066" + ], + [ + "gene_synonym", + "dnaG" + ], + [ + "gene_synonym", + "dnaP" + ], + [ + "gene_synonym", + "parB" + ], + [ + "gene_synonym", + "sdgA" + ] + ], + "dna_sequence": "ATGGCTGGACGAATCCCACGCGTATTCATTAATGATCTGCTGGCACGCACTGACATCGTCGATCTGATCGATGCCCGTGTGAAGCTGAAAAAGCAGGGCAAGAATTTCCACGCGTGTTGTCCATTCCACAACGAGAAAACCCCGTCCTTCACCGTTAACGGTGAGAAACAGTTTTACCACTGCTTTGGATGTGGCGCGCACGGCAACGCGATCGACTTCCTGATGAACTACGACAAGCTCGAGTTCGTCGAAACGGTCGAAGAGCTGGCAGCAATGCACAATCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCAAACGCTTTATCAGTTGATGGACGGTCTGAATACGTTTTACCAACAATCTTTACAACAACCTGTTGCCACGTCTGCGCGCCAGTATCTGGAAAAACGCGGATTAAGCCACGAGGTTATCGCTCGCTTTGCGATTGGTTTTGCGCCCCCCGGCTGGGACAACGTCCTGAAGCGGTTTGGCGGCAATCCAGAAAATCGCCAGTCATTGATTGATGCGGGGATGTTGGTCACTAACGATCAGGGACGCAGTTACGATCGTTTCCGCGAGCGGGTGATGTTCCCCATTCGCGATAAACGCGGTCGGGTGATTGGTTTTGGCGGGCGCGTGCTGGGCAACGATACCCCCAAATACCTGAACTCGCCGGAAACAGACATTTTCCATAAAGGCCGCCAGCTTTACGGTCTTTATGAAGCGCAGCAGGATAACGCTGAACCCAATCGTCTGCTTGTGGTCGAAGGCTATATGGACGTGGTGGCGCTGGCGCAATACGGCATTAATTACGCCGTTGCGTCGTTAGGTACGTCAACCACCGCCGATCACATACAACTGTTGTTCCGCGCGACCAACAATGTCATTTGCTGTTATGACGGCGACCGTGCAGGCCGCGATGCCGCCTGGCGAGCGCTGGAAACGGCGCTGCCTTACATGACAGACGGCCGTCAGCTACGCTTTATGTTTTTGCCTGATGGCGAAGACCCTGACACGCTAGTACGAAAAGAAGGTAAAGAAGCGTTTGAAGCGCGGATGGAGCAGGCGATGCCACTCTCCGCATTTCTGTTTAACAGTCTGATGCCGCAAGTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTTGATGACAGCCAGCTTGAACGATTAATGCCAAAAGCGGCAGAGAGCGGCGTTTCTCGCCCTGTTCCGCAGCTAAAACGCACGACCATGCGTATACTTATAGGGTTGCTGGTGCAAAATCCAGAATTAGCGACGTTGGTCCCGCCGCTTGAGAATCTGGATGAAAATAAGCTCCCTGGACTTGGCTTATTCAGAGAACTGGTCAACACTTGTCTCTCCCAGCCAGGTCTGACCACCGGGCAACTTTTAGAGCACTATCGTGGTACAAATAATGCTGCCACCCTTGAAAAACTGTCGATGTGGGACGATATAGCAGATAAGAATATTGCTGAGCAAACCTTCACCGACTCACTCAACCATATGTTTGATTCGCTGCTTGAACTGCGCCAGGAAGAGTTAATCGCTCGTGAGCGCACGCATGGTTTAAGCAACGAAGAACGCCTGGAGCTCTGGACATTAAACCAGGAGCTGGCGAAAAAGTGA", + "dna_sequence_length": 1746, + "functions": [ + "DNA primase" + ], + "id": "CDS_3017", + "location": [ + [ + "NC_000913", + 3211107, + "+", + 1746 + ] + ], + "md5": "5e69f7ec9e6d39e945a8d6ee3b1e031f", + "parent_gene": "", + "protein_md5": "8166426a347df465adb7d98c38e84e0a", + "protein_translation": "MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK", + "protein_translation_length": 581, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010070" + ], + [ + "gene_synonym", + "ECK3057" + ], + [ + "gene_synonym", + "EcoGene:EG10896" + ], + [ + "gene_synonym", + "GI:16130963" + ], + [ + "gene_synonym", + "GeneID:947567" + ], + [ + "gene_synonym", + "JW3039" + ], + [ + "gene_synonym", + "NP_417539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00579" + ], + [ + "gene_synonym", + "alt" + ], + [ + "gene_synonym", + "b3067" + ], + [ + "gene_synonym", + "rpoD" + ] + ], + "dna_sequence": "ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTGCTGAATATCCGGAAGCGATCACCTATCTGCTGGAACAGTACGATCGTGTTGAAGCAGAAGAAGCGCGTCTGTCCGATCTGATCACCGGCTTTGTTGACCCGAACGCAGAAGAAGATCTGGCACCTACCGCCACTCACGTCGGTTCTGAGCTTTCCCAGGAAGATCTGGACGATGACGAAGATGAAGACGAAGAAGATGGCGATGACGACAGCGCCGATGATGACAACAGCATCGACCCGGAACTGGCTCGCGAAAAATTTGCGGAACTACGCGCTCAGTACGTTGTAACGCGTGACACCATCAAAGCGAAAGGTCGCAGTCACGCTACCGCTCAGGAAGAGATCCTGAAACTGTCTGAAGTATTCAAACAGTTCCGCCTGGTGCCGAAGCAGTTTGACTACCTGGTCAACAGCATGCGCGTCATGATGGACCGCGTTCGTACGCAAGAACGTCTGATCATGAAGCTCTGCGTTGAGCAGTGCAAAATGCCGAAGAAAAACTTCATTACCCTGTTTACCGGCAACGAAACCAGCGATACCTGGTTCAACGCGGCAATTGCGATGAACAAGCCGTGGTCGGAAAAACTGCACGATGTCTCTGAAGAAGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGTATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATACACCAACCGTGGCTTGCAGTTCCTTGACCTGATTCAGGAAGGCAACATCGGTCTGATGAAAGCGGTTGATAAATTCGAATACCGCCGTGGTTACAAGTTCTCCACCTACGCAACCTGGTGGATCCGTCAGGCGATCACCCGCTCTATCGCGGATCAGGCGCGCACCATCCGTATTCCGGTGCATATGATTGAGACCATCAACAAGCTCAACCGTATTTCTCGCCAGATGCTGCAAGAGATGGGCCGTGAACCGACGCCGGAAGAACTGGCTGAACGTATGCTGATGCCGGAAGACAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAA", + "dna_sequence_length": 1842, + "functions": [ + "RNA polymerase, sigma 70 (sigma D) factor" + ], + "id": "CDS_3018", + "location": [ + [ + "NC_000913", + 3213047, + "+", + 1842 + ] + ], + "md5": "164eec255f18ce097c7563b8d6039d7d", + "parent_gene": "", + "protein_md5": "76c71bc8c46d1acced17d1ca3625783a", + "protein_translation": "MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD", + "protein_translation_length": 613, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010073" + ], + [ + "gene_synonym", + "ECK3058" + ], + [ + "gene_synonym", + "EcoGene:EG12717" + ], + [ + "gene_synonym", + "GI:16130964" + ], + [ + "gene_synonym", + "GeneID:947560" + ], + [ + "gene_synonym", + "JW3040" + ], + [ + "gene_synonym", + "NP_417540.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9H1" + ], + [ + "gene_synonym", + "b3068" + ], + [ + "gene_synonym", + "dug" + ], + [ + "gene_synonym", + "mug" + ], + [ + "gene_synonym", + "ygjF" + ] + ], + "dna_sequence": "ATGGTTGAGGATATTTTGGCTCCAGGGTTACGGGTCGTGTTTTGCGGTATCAACCCTGGGCTTTCATCCGCCGGGACTGGTTTTCCCTTTGCTCATCCGGCAAATCGCTTCTGGAAGGTGATATATCAGGCCGGGTTTACCGACCGTCAGTTGAAGCCGCAGGAGGCACAGCATCTGCTGGATTATCGTTGTGGCGTCACCAAACTGGTAGACCGTCCAACGGTGCAAGCCAATGAAGTTTCAAAGCAGGAGCTACACGCAGGCGGGCGTAAGCTGATTGAAAAAATTGAAGATTATCAGCCGCAGGCGTTGGCGATTCTGGGCAAACAAGCATATGAACAGGGATTCAGCCAGCGCGGTGCACAGTGGGGGAAACAAACGCTCACCATTGGTTCGACGCAGATTTGGGTGCTGCCAAATCCCAGCGGTTTAAGTCGCGTTTCACTGGAGAAACTGGTTGAAGCGTATCGCGAGCTGGACCAGGCGCTGGTAGTGCGTGGGCGATAA", + "dna_sequence_length": 507, + "functions": [ + "G/U mismatch-specific DNA glycosylase", + "xanthine DNA glycosylase" + ], + "id": "CDS_3019", + "location": [ + [ + "NC_000913", + 3215473, + "-", + 507 + ] + ], + "md5": "d8f02ce49f67c02829375eb6606c6e5d", + "parent_gene": "", + "protein_md5": "75f1ddc04ebf9d5bc247ed264936c742", + "protein_translation": "MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR", + "protein_translation_length": 168, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010079" + ], + [ + "gene_synonym", + "ECK3060" + ], + [ + "gene_synonym", + "EcoGene:EG12953" + ], + [ + "gene_synonym", + "GI:16130965" + ], + [ + "gene_synonym", + "GeneID:947582" + ], + [ + "gene_synonym", + "JW3041" + ], + [ + "gene_synonym", + "NP_417541.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46871" + ], + [ + "gene_synonym", + "b3070" + ], + [ + "gene_synonym", + "yqjH" + ] + ], + "dna_sequence": "ATGAATAACACCCCCCGCTACCCGCAGCGCGTTCGCAATGATCTGCGCTTCCGTGAACTGACTGTGTTACGCGTTGAGCGCATCAGCGCCGGTTTTCAGCGCATTGTCCTCGGCGGCGAGGCGCTGGACGGTTTTACATCGCGTGGCTTTGACGATCACAGCAAACTCTTCTTTCCTCAACCTGACGCTCACTTTGTGCCGCCAACGGTAACGGAAGAGGGCATCGTCTGGCCGGAAGGACCACGCCCACCGTCGCGTGACTATACGCCGCTGTATGACGAACTACGCCATGAACTGGCGATTGATTTCTTTATTCACGACGGTGGGGTCGCCAGCGGCTGGGCGATGCAGGCGCAACCGGGCGATAAACTTACGGTGGCAGGTCCGCGCGGTTCGCTGGTGGTGCCGGAAGATTACGCGTATCAGCTGTATGTCTGCGATGAATCCGGAATGCCTGCATTGCGCCGCCGCCTGGAAACGTTGAGCAAACTTGCCGTTAAACCGCAAGTTAGTGCGCTGGTTAGCGTGCGGGATAACGCCTGTCAGGATTATCTCGCGCACCTTGATGGTTTTAATATCGAATGGCTGGCACATGATGAGCAGGCGGTAGATGCGCGTCTGGCGCAGATGCAAATCCCTGCCGATGATTACTTCATCTGGATAACCGGCGAAGGTAAAGTCGTTAAGAATTTAAGCCGCCGCTTTGAAGCGGAACAGTATGACCCACAGCGGGTACGTGCAGCGGCTTACTGGCACGCAAAGTAA", + "dna_sequence_length": 765, + "functions": [ + "putative siderophore interacting protein" + ], + "id": "CDS_3020", + "location": [ + [ + "NC_000913", + 3216491, + "-", + 765 + ] + ], + "md5": "5788610d52e232e532b2860046b9d024", + "parent_gene": "", + "protein_md5": "89743da0e8d34386567f46ec472079d8", + "protein_translation": "MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010084" + ], + [ + "gene_synonym", + "ECK3061" + ], + [ + "gene_synonym", + "EcoGene:EG12954" + ], + [ + "gene_synonym", + "GI:16130966" + ], + [ + "gene_synonym", + "GeneID:947584" + ], + [ + "gene_synonym", + "JW3042" + ], + [ + "gene_synonym", + "NP_417542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64588" + ], + [ + "gene_synonym", + "b3071" + ], + [ + "gene_synonym", + "yqjI" + ] + ], + "dna_sequence": "ATGAGCCATCATCACGAAGGGTGTTGTAAACATGAAGGCCAGCCACGCCATGAGGGCTGCTGCAAAGGTGAGAAGTCAGAACACGAGCACTGCGGACACGGTCACCAGCATGAACACGGTCAATGCTGCGGTGGTCGCCACGGTCGCGGCGGCGGTCGTCGGCAACGTTTCTTTGGTCACGGTGAATTACGTCTGGTGATTCTGGATATTCTCTCGCGCGATGACAGCCACGGTTACGAATTGATTAAAGCGATTGAGAATCTAACCCAGGGGAATTACACCCCAAGCCCGGGCGTCATCTACCCAACGCTGGATTTTCTGCAGGAGCAGTCGCTGATTACCATCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAA", + "dna_sequence_length": 624, + "functions": [ + "PadR family putative transcriptional regulator" + ], + "id": "CDS_3021", + "location": [ + [ + "NC_000913", + 3216779, + "+", + 624 + ] + ], + "md5": "8f7953f9fac78d5b8c45dbd5eb6a33b0", + "parent_gene": "", + "protein_md5": "9e7b731c1405f719730bee5ea85424e0", + "protein_translation": "MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010087" + ], + [ + "gene_synonym", + "ECK3062" + ], + [ + "gene_synonym", + "EcoGene:EG12955" + ], + [ + "gene_synonym", + "GI:16130967" + ], + [ + "gene_synonym", + "GeneID:945301" + ], + [ + "gene_synonym", + "JW3043" + ], + [ + "gene_synonym", + "NP_417543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P50466" + ], + [ + "gene_synonym", + "aer" + ], + [ + "gene_synonym", + "air" + ], + [ + "gene_synonym", + "b3072" + ], + [ + "gene_synonym", + "yqjJ" + ] + ], + "dna_sequence": "ATGTCTTCTCATCCGTATGTCACCCAGCAAAATACCCCGCTGGCGGACGATACCACTCTGATGTCCACTACCGATCTGCAAAGCTATATCACTCATGCTAATGACACTTTTGTGCAGGTGAGCGGCTATACCTTGCAAGAGTTACAAGGGCAGCCGCACAACATGGTGCGTCACCCGGATATGCCAAAAGCGGCGTTTGCGGATATGTGGTTCACCCTGAAAAAAGGGGAGCCCTGGAGCGGCATCGTGAAAAATCGCCGCAAAAATGGTGACCATTATTGGGTGCGGGCCAATGCGGTACCGATGGTGCGCGAGGGAAAAATCAGTGGCTATATGTCGATTCGTACCCGGGCGACGGATGAAGAGATCGCGGCGGTGGAGCCGCTGTACAAAGCGTTGAACGCCGGACGTACCAGTAAGCGTATTCATAAAGGCCTGGTGGTGCGTAAAGGCTGGCTGGGTAAACTGCCTTCATTACCGCTTCGCTGGCGGGCGCGTGGAGTGATGACCCTGATGTTTATCTTGCTGGCGGCCATGCTTTGGTTTGTTGCTGCCCCGGTGGTGACGTATATCCTCTGTGCGTTAGTGGTATTGTTGGCAAGCGCCTGTTTTGAATGGCAGATTGTGCGCCCGATAGAAAATGTTGCCCATCAGGCACTGAAGGTGGCGACCGGAGAACGTAATAGTGTTGAGCATCTGAATCGCAGCGATGAGCTGGGGCTGACATTACGTGCGGTAGGGCAACTTGGCCTGATGTGCCGTTGGCTAATTAACGATGTCTCAAGCCAGGTGTCCAGTGTCAGAAATGGCAGTGAGACGCTGGCGAAAGGCACCGATGAACTGAACGAACATACCCAGCAGACAGTTGATAACGTTCAGCAAACGGTGGCGACCATGAACCAAATGGCGGCGTCGGTGAAACAGAACTCTGCCACGGCGTCGGCTGCCGATAAACTGTCAATCACTGCCAGTAATGCGGCAGTGCAGGGTGGGGAGGCGATGACCACGGTGATCAAGACAATGGACGATATCGCCGACAGTACCCAGCGCATTGGCACCATTACTTCGCTGATTAACGATATTGCGTTTCAGACCAATATTCTGGCCCTGAATGCGGCGGTGGAAGCGGCGCGTGCCGGCGAACAGGGCAAAGGTTTTGCAGTGGTGGCAGGGGAAGTGCGTCATTTAGCCAGCCGCAGCGCTAATGCTGCCAACGATATTCGCAAGCTGATTGATGCCAGTGCTGATAAGGTGCAATCCGGTTCGCAGCAGGTACACGCCGCCGGACGGACGATGGAAGATATTGTGGCACAGGTGAAAAACGTCACCCAGTTGATCGCCCAGATTAGCCATTCAACGCTGGAACAGGCCGATGGGCTTTCCAGCCTGACCCGTGCAGTGGATGAGCTTAACCTGATCACCCAGAAAAATGCCGAGCTGGTGGAAGAGAGTGCGCAGGTGTCGGCGATGGTGAAACACCGCGCCAGCCGACTGGAAGACGCGGTGACGGTACTGCATTAA", + "dna_sequence_length": 1521, + "functions": [ + "fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component" + ], + "id": "CDS_3022", + "location": [ + [ + "NC_000913", + 3219076, + "-", + 1521 + ] + ], + "md5": "c385adbe00a0a0e414fdb0dd3f906fcd", + "parent_gene": "", + "protein_md5": "30e4d3df452f39f6eb787eefa47371f1", + "protein_translation": "MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAMLWFVAAPVVTYILCALVVLLASACFEWQIVRPIENVAHQALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010092" + ], + [ + "gene_synonym", + "ECK3063" + ], + [ + "gene_synonym", + "EcoGene:EG12718" + ], + [ + "gene_synonym", + "GI:145698310" + ], + [ + "gene_synonym", + "GeneID:947120" + ], + [ + "gene_synonym", + "JW5510" + ], + [ + "gene_synonym", + "NP_417544.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42588" + ], + [ + "gene_synonym", + "b3073" + ], + [ + "gene_synonym", + "patA" + ], + [ + "gene_synonym", + "ygjG" + ] + ], + "dna_sequence": "TTGAACAGGTTACCTTCGAGCGCATCGGCTTTAGCGTGCAGCGCCCACGCCCTGAATCTCATTGAGAAGCGAACGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAAAGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAAGCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAACCGCTGCACAGCCAGGAGCTGCTCGATCCGTTACGGGCGATGTTGGCGAAAACCCTTGCTGCGCTAACGCCCGGTAAACTGAAATACAGCTTCTTCTGTAATAGCGGCACCGAGTCCGTTGAAGCAGCGCTGAAGCTGGCGAAAGCTTACCAGTCACCGCGCGGCAAGTTTACTTTTATTGCCACCAGCGGCGCGTTCCACGGTAAATCACTTGGCGCGCTGTCGGCCACGGCGAAATCGACCTTCCGCAAACCGTTTATGCCGTTACTGCCGGGCTTCCGTCATGTGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGGGCTATCTCACCGCCGTACGTAAGCTATGCGATGAGTTCGGCGCACTGATGATCCTCGATGAAGTACAAACGGGCATGGGGCGCACGGGCAAGATGTTCGCCTGCGAGCATGAGAACGTACAGCCGGATATCCTCTGCCTTGCCAAAGCGCTCGGCGGCGGCGTGATGCCGATTGGCGCGACCATCGCCACTGAAGAGGTGTTTTCAGTTCTGTTCGACAACCCATTCCTGCATACCACCACCTTTGGCGGCAACCCGCTGGCCTGTGCGGCGGCGCTGGCGACCATCAATGTGTTGCTGGAGCAGAACTTACCGGCTCAGGCTGAGCAAAAAGGCGATATGTTGCTGGACGGTTTCCGTCAACTGGCGCGGGAATATCCCGATCTGGTACAGGAAGCGCGTGGTAAAGGGATGTTGATGGCGATTGAGTTTGTTGATAACGAAATCGGCTATAACTTTGCCAGCGAGATGTTCCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAA", + "dna_sequence_length": 1380, + "functions": [ + "putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent" + ], + "id": "CDS_3023", + "location": [ + [ + "NC_000913", + 3219494, + "+", + 1380 + ] + ], + "md5": "02cccfbe9ca8186762f19b791ee2854b", + "parent_gene": "", + "protein_md5": "9cc7fea250614a449e1972be0e294ae7", + "protein_translation": "MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA", + "protein_translation_length": 459, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010094" + ], + [ + "gene_synonym", + "ECK3064" + ], + [ + "gene_synonym", + "EcoGene:EG12719" + ], + [ + "gene_synonym", + "GI:16130969" + ], + [ + "gene_synonym", + "GeneID:946251" + ], + [ + "gene_synonym", + "JW3045" + ], + [ + "gene_synonym", + "NP_417545.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42589" + ], + [ + "gene_synonym", + "b3074" + ], + [ + "gene_synonym", + "ygjH" + ] + ], + "dna_sequence": "ATGGAAACCGTGGCTTACGCTGATTTTGCACGTCTGGAAATGCGCGTCGGAAAGATTGTGGAAGTGAAACGCCATGAAAACGCCGACAAGCTGTACATCGTACAGGTTGATGTGGGGCAAAAAACGCTGCAAACCGTGACCAGCCTGGTGCCGTACTACAGCGAAGAAGAGCTGATGGGGAAAACGGTGGTGGTCTTATGCAATCTGCAAAAAGCGAAAATGCGTGGTGAAACGTCGGAATGCATGCTGTTGTGTGCGGAAACCGATGACGGCAGTGAAAGCGTGCTGTTAACGCCGGAGCGGATGATGCCTGCGGGCGTACGCGTCGTATAA", + "dna_sequence_length": 333, + "functions": [ + "putative tRNA binding protein", + "putative tRNA corner chaperone" + ], + "id": "CDS_3024", + "location": [ + [ + "NC_000913", + 3221247, + "-", + 333 + ] + ], + "md5": "382450f5690beced4389c3a161e7a9f8", + "parent_gene": "", + "protein_md5": "3b1620e059d8bad80a31586fb0dc07aa", + "protein_translation": "METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010099" + ], + [ + "gene_synonym", + "ECK3065" + ], + [ + "gene_synonym", + "EcoGene:EG10254" + ], + [ + "gene_synonym", + "GI:16130970" + ], + [ + "gene_synonym", + "GeneID:947586" + ], + [ + "gene_synonym", + "JW3046" + ], + [ + "gene_synonym", + "NP_417546.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06846" + ], + [ + "gene_synonym", + "b3075" + ], + [ + "gene_synonym", + "ebgR" + ] + ], + "dna_sequence": "ATGGCAACACTAAAAGACATCGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCCCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTGGGCATCGAGCTCACCAACTGTTATGAACACAGCGGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTGGCAAGGCGGATATTCGTGAGGTCGCCTTTGCGGAATATGGCCGACTGAAACAAGTGGTACGCGAAGAGGATATCTGGCGCGGCGGTTTTTCCAGTTCGTCGGGTTATGAACTGGCAAAACAAATGCTGGCGCGGGAAGACTATCCGAAGGCACTGTTTGTTGCTTCCGATTCCATTGCTATCGGCGTACTGCGGGCAATTCATGAACGAGGCCTGAACATCCCACAGGATATTTCGCTTATCAGCGTTAACGATATCCCCACCGCGCGATTTACCTTTCCGCCGCTCTCCACCGTGCGCATCCATTCCGAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAA", + "dna_sequence_length": 984, + "functions": [ + "transcriptional repressor" + ], + "id": "CDS_3025", + "location": [ + [ + "NC_000913", + 3221466, + "+", + 984 + ] + ], + "md5": "8515deae7bb86e322ac631666427de65", + "parent_gene": "", + "protein_md5": "f3727352e1569bc404d406943a74ceb2", + "protein_translation": "MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010104" + ], + [ + "gene_synonym", + "ECK3066" + ], + [ + "gene_synonym", + "EcoGene:EG10252" + ], + [ + "gene_synonym", + "GI:49176308" + ], + [ + "gene_synonym", + "GeneID:947583" + ], + [ + "gene_synonym", + "JW5511" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06864" + ], + [ + "gene_synonym", + "YP_026199.1" + ], + [ + "gene_synonym", + "b3076" + ], + [ + "gene_synonym", + "ebgA" + ] + ], + "dna_sequence": "ATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTGCGCAAGCGCGTACCTTTGCCCGCGAAACCAGCAGCCTGTTTCTGCCCTTAAGCGGTCAGTGGAATTTCCACTTTTTTGACCATCCGCTGCAAGTACCAGAAGCCTTCACCTCTGAGTTAATGGCTGACTGGGGGCATATTACCGTCCCCGCCATGTGGCAAATGGAAGGTCACGGCAAACTGCAATATACCGACGAAGGTTTTCCGTTCCCCATCGATGTGCCGTTTGTCCCCAGCGATAACCCAACCGGTGCCTATCAACGTATTTTCACCCTCAGCGACGGCTGGCAGGGTAAACAGACGCTGATTAAATTTGACGGCGTCGAAACCTATTTTGAAGTCTATGTTAACGGTCAGTATGTGGGTTTCAGCAAGGGCAGTCGCCTGACCGCAGAGTTTGACATCAGCGCGATGGTTAAAACCGGCGACAACCTGTTGTGTGTGCGCGTGATGCAGTGGGCGGACTCTACCTACGTGGAAGACCAGGATATGTGGTGGTCAGCGGGGATCTTCCGCGATGTTTATCTGGTCGGAAAACACCTAACGCATATTAACGATTTCACTGTGCGTACCGACTTTGACGAAGCCTATTGCGATGCCACGCTTTCCTGCGAAGTGGTGCTGGAAAATCTCGCCGCCTCCCCTGTCGTCACGACGCTGGAATATACCCTGTTTGATGGCGAACGCGTGGTGCACAGCAGCGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATGGTCAGCAGAATCCCCTTATCTTTACCATCTGGTCATGACGCTGAAAGACGCCAACGGCAACGTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCTGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAAGCAGCACAATATCAACTCCGTGCGTACCGCTCACTACCCGAACGATCCGCGTTTTTACGAACTGTGTGATATCTACGGCCTGTTTGTGATGGCGGAAACCGACGTCGAATCGCACGGCTTTGCTAATGTCGGCGATATTAGCCGTATTACCGACGATCCGCAGTGGGAAAAAGTCTACGTCGAGCGCATTGTTCGCCATATCCACGCGCAGAAAAACCATCCGTCGATCATCATCTGGTCGCTGGGCAATGAATCCGGCTATGGCTGTAACATCCGCGCGATGTACCATGCGGCGAAAGCGCTGGATGACACGCGACTGGTGCATTACGAAGAAGATCGCGATGCTGAAGTGGTCGATATTATTTCCACCATGTACACCCGCGTGCCGCTGATGAATGAGTTTGGTGAATACCCGCATCCGAAGCCGCGCATCATCTGTGAATATGCTCATGCGATGGGGAACGGACCGGGCGGGCTGACGGAGTACCAGAACGTCTTCTATAAGCACGATTGCATTCAGGGTCATTATGTCTGGGAGTGGTGCGACCACGGGATCCAGGCACAGGACGACCACGGCAATGTCTGGTATAAATTCGGCGGCGACTACGGCGACTATCCCAACAACTATAACTTCTGTCTTGATGGTTTGATCTATTCCGATCAGACGCCGGGACCGGGCCTGAAAGAGTACAAACAGGTTATCGCGCCGGTAAAAATCCACGCGCGGGATCTGACTCGCGGCGAGTTGAAAGTCGAAAATAAACTGTGGTTTACCACGCTTGATGACTACACCCTGCACGCAGAGGTGCGCGCCGAAGGTGAAACGCTCGCGACGCAGCAGATTAAACTGCGCGACGTTGCGCCGAACAGCGAAGCCCCCTTGCAGATCACGCTGCCGCAGCTGGACGCCCGCGAAGCGTTCCTCAACATTACGGTGACCAAAGATTCCCGCACCCGCTACAGCGAAGCCGGACACCCTATCGCCACTTATCAGTTCCCGCTGAAGGAAAACACCGCGCAGCCAGTGCCTTTCGCACCAAATAATGCGCGTCCGCTGACGCTGGAAGACGATCGTTTGAGCTGCACCGTTCGCGGCTACAACTTCGCGATCACCTTCTCAAAAATGAGTGGCAAACCGACATCCTGGCAGGTGAATGGCGAATCGCTGCTGACTCGCGAGCCAAAGATCAACTTCTTCAAGCCGATGATCGACAACCACAAGCAGGAGTACGAAGGGCTGTGGCAACCGAATCATTTGCAGATCATGCAGGAACATCTGCGCGACTTTGCCGTAGAACAGAGCGATGGTGAAGTGCTGATCATCAGCCGCACAGTTATTGCCCCGCCGGTGTTTGACTTCGGGATGCGCTGCACCTACATCTGGCGCATCGCTGCCGATGGCCAGGTTAACGTGGCGCTTTCCGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTAACGGTCTGCTGGTGGTTCCGCAGCGCCCAATTAACTTCAGCGCCTGGCACTATACCCAGGAAAACATCCACGCTGCCCAGCACTGTAACGAGCTGCAGCGCAGTGATGACATCACCCTGAACCTCGATCACCAGCTGCTTGGCCTCGGCTCCAACTCCTGGGGCAGCGAGGTGCTGGACTCCTGGCGCGTCTGGTTCCGTGACTTCAGCTACGGCTTTACGTTGCTGCCGGTTTCTGGCGGAGAAGCTACCGCGCAAAGCCTGGCGTCGTATGAGTTCGGCGCAGGGTTCTTTTCCACGAATTTGCACAGCGAGAATAAGCAATGA", + "dna_sequence_length": 3093, + "functions": [ + "evolved beta-D-galactosidase, alpha subunit" + ], + "id": "CDS_3026", + "location": [ + [ + "NC_000913", + 3222633, + "+", + 3093 + ] + ], + "md5": "1c38e7efec4698c146c5c1e69824b090", + "parent_gene": "", + "protein_md5": "695d885ee329a60de897093ae234fd15", + "protein_translation": "MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTTLDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHPIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ", + "protein_translation_length": 1030, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010106" + ], + [ + "gene_synonym", + "ECK3067" + ], + [ + "gene_synonym", + "EcoGene:EG10253" + ], + [ + "gene_synonym", + "GI:16130972" + ], + [ + "gene_synonym", + "GeneID:947581" + ], + [ + "gene_synonym", + "JW3048" + ], + [ + "gene_synonym", + "NP_417548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC73" + ], + [ + "gene_synonym", + "b3077" + ], + [ + "gene_synonym", + "ebgC" + ] + ], + "dna_sequence": "ATGAGGATCATCGATAACTTAGAACAGTTCCGCCAGATTTACGCCTCTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAA", + "dna_sequence_length": 450, + "functions": [ + "evolved beta-D-galactosidase, beta subunit", + "cupin superfamily" + ], + "id": "CDS_3027", + "location": [ + [ + "NC_000913", + 3225722, + "+", + 450 + ] + ], + "md5": "4c407aabc67f37752277fa062169fe75", + "parent_gene": "", + "protein_md5": "a66343ae1ae0ed0862055ecd995a3a4f", + "protein_translation": "MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010110" + ], + [ + "gene_synonym", + "ECK3068" + ], + [ + "gene_synonym", + "EcoGene:EG12720" + ], + [ + "gene_synonym", + "GI:49176309" + ], + [ + "gene_synonym", + "GeneID:947579" + ], + [ + "gene_synonym", + "JW5512" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42590" + ], + [ + "gene_synonym", + "YP_026200.1" + ], + [ + "gene_synonym", + "b3078" + ], + [ + "gene_synonym", + "ebgB" + ], + [ + "gene_synonym", + "ygjI" + ] + ], + "dna_sequence": "ATGTCTGATACCAAACGTAATACAATCGGCAAATTCGGCTTGCTCTCGCTGACTTTTGCCGCCGTTTACAGCTTTAACAACGTTATCAATAATAATATTGAGCTTGGACTGGCCTCGGCACCGATGTTTTTCCTCGCGACGATTTTTTATTTTATTCCCTTCTGTCTGATCATCGCAGAATTTGTTTCGTTAAATAAAAACTCAGAAGCCGGTGTCTACGCGTGGGTAAAAAGTTCGCTGGGCGGACGTTGGGCATTTATTACTGCCTATACCTACTGGTTCGTAAACCTGTTCTTTTTCACCTCACTGTTGCCGCGCGTTATTGCTTATGCTTCGTATGCCTTCCTCGGATACGAATATATTATGACGCCGGTTGCCACCACCATTATCAGTATGGTGCTGTTCGCCTTCTCCACCTGGGTTTCCACCAACGGGGCGAAAATGTTGGGGCCAATTACCTCCGTCACTTCAACGCTGATGCTGCTGTTAACGCTCTCCTACATTTTACTGGCAGGTACGGCGCTGGTTGGCGGCGTACAGCCTGCTGACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCGGCGTATTTTGGTCTACCGGAAGCGTTGATGAATCGCTTTGTCGGTCTGGTGTCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTTACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAA", + "dna_sequence_length": 1434, + "functions": [ + "putative transporter" + ], + "id": "CDS_3028", + "location": [ + [ + "NC_000913", + 3226234, + "+", + 1434 + ] + ], + "md5": "2019b27769838883faa5909863e1f95d", + "parent_gene": "", + "protein_md5": "a2eb5d385ad3a165afe233ad8a00166e", + "protein_translation": "MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLMLLLTLSYILLAGTALVGGVQPADAITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAYFGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLDHLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIEATPASNVD", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010115" + ], + [ + "gene_synonym", + "ECK3069" + ], + [ + "gene_synonym", + "EcoGene:EG12721" + ], + [ + "gene_synonym", + "GI:16130974" + ], + [ + "gene_synonym", + "GeneID:947597" + ], + [ + "gene_synonym", + "JW3050" + ], + [ + "gene_synonym", + "NP_417550.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42591" + ], + [ + "gene_synonym", + "b3079" + ], + [ + "gene_synonym", + "ygjJ" + ] + ], + "dna_sequence": "ATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCACGACGGCAATGCCTGGGTGCCAGACCATAGCTGGGGTGGTTTCGAGGGCGGAATTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAATGATGAACGGTTACATCCAGTATGACCTTGCCGAAGGCATCACCTGGATGAACGGTCTGGAAATCACCGACGGCACAGGACAGCTCTATCTCACGGGCCTGCTAACTCCTAACTTTGCCGCTCGCGCCTGGCACCATACCGGACGCGCCGACGGGCTGGACGTACCGGGAAGTGAAAGTGGGATGATGGTGAGCGCCATGTATGAAGCGTTAAAGGGCGTTTATCTCTCCACCGCTTACACCTACGCCAAACATCGCCCTGACCACGCTGACGATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAA", + "dna_sequence_length": 1071, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_3029", + "location": [ + [ + "NC_000913", + 3227801, + "+", + 1071 + ] + ], + "md5": "10c4a84b592c30afbe00bfb698bbd9cc", + "parent_gene": "", + "protein_md5": "1578375503ad9ce17119c810896a5e38", + "protein_translation": "MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQIFLMQYFYW", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010118" + ], + [ + "gene_synonym", + "ECK3070" + ], + [ + "gene_synonym", + "EcoGene:EG12722" + ], + [ + "gene_synonym", + "GI:16130975" + ], + [ + "gene_synonym", + "GeneID:947596" + ], + [ + "gene_synonym", + "JW3051" + ], + [ + "gene_synonym", + "NP_417551.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42592" + ], + [ + "gene_synonym", + "b3080" + ], + [ + "gene_synonym", + "ygjK" + ] + ], + "dna_sequence": "ATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAACGTGATTAACCGTACTGGCGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATCCGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCTAACACCATGGGCGGCTTTCCGGGCGTTGCGCTGCTGACGGAAGAGTACATCAACTTTATGGCCAGCAATTTCGACCGCCTGACCGTCTGGCAGGACGGCAAGAAAGTCGACTTTACGCTGGAGGCATACAGTATTCCCGGTGCGCTGGTGCAAAAACTGACAGCAAAAGATGTGCAAGTCGAAATGACTCTGCGCTTCGCCACGCCGCGCACGTCACTACTGGAAACCAAAATCACCAGCAATAAACCGCTGGATCTGGTGTGGGACGGCGAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTATCAGCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCGGCGAATCGGAATATCAGGTGCATAAATCCCTGCCGGTGCAGACTGAAATCAACGGTAATCGCTTTACCAGTAAGGCGCATATCAACGGTTCGACCACGCTCTACACCACCTATTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGATCCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTGGCGATAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAACCTTAGCCCCGAGCGTGGTGGCGATGGCGGCAACTGGAACGAACGTAATACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTATAACGTCACCCAAGATAAAACCTGGGTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCGATCACAACGGCAACGGCGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACTGAGAGCGGCGAGATGCTGTTTACGGTGAAAAAAGGCGATAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGACAGTCTGGAAATTCCGGCACAGGTTGCTGCATCGTGGGAATCGGGGCGTGATGATGCCGCCGTCTTTGGGTTTATCGACAAAGAACAGTTGGATAAATATGTCGCTAATGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAAAACCGCAGTCAGGACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCTGGCGGAGATGGCAACCATCCTCGGTAAGCCAGAAGAGGCCAAACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAACACCTTTGTCCCGCTGGGAACGGCGGCGTTAACCAATCCGGCTTTTGGCGCTGATATCTACTGGCGTGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAGCGTTACGGTTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAA", + "dna_sequence_length": 2352, + "functions": [ + "alpha-glucosidase" + ], + "id": "CDS_3030", + "location": [ + [ + "NC_000913", + 3228888, + "+", + 2352 + ] + ], + "md5": "fd04c236c6a69a6ab77b5a7a22d1c45e", + "parent_gene": "", + "protein_md5": "22accb0a546c5e0ec3b89f972819ea13", + "protein_translation": "MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ", + "protein_translation_length": 783, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010124" + ], + [ + "gene_synonym", + "ECK3071" + ], + [ + "gene_synonym", + "EcoGene:EG12723" + ], + [ + "gene_synonym", + "GI:16130976" + ], + [ + "gene_synonym", + "GeneID:947594" + ], + [ + "gene_synonym", + "JW3052" + ], + [ + "gene_synonym", + "NP_417552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42593" + ], + [ + "gene_synonym", + "b3081" + ], + [ + "gene_synonym", + "fadH" + ], + [ + "gene_synonym", + "ygjL" + ] + ], + "dna_sequence": "ATGAGCTACCCGTCGCTGTTCGCCCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGTGGCGCTGATTGTCAGCGGCGGCATTGCACCAGATTTAACAGGCGTTGGCATGGAAGGTGGCGCAATGCTCAACGACGCCAGCCAGATCCCACACCATCGCACCATTACCGAAGCGGTACATCAGGAAGGCGGCAAAATAGCCCTGCAAATTTTGCATACCGGGCGCTACAGCTACCAACCGCATCTGGTCGCCCCGTCCGCATTGCAGGCCCCCATCAACCGTTTCGTGCCCCATGAGTTAAGCCATGAAGAGATCCTGCAACTGATCGACAATTTCGCCCGCTGCGCGCAACTGGCGCGGGAGGCAGGATACGACGGTGTAGAGGTGATGGGTTCCGAAGGGTATTTGATCAACGAATTTCTGACGCTGCGCACCAATCAGCGTAGTGACCAGTGGGGCGGCGATTACCGCAACCGGATGCGATTTGCCGTAGAAGTAGTGCGTGCGGTGCGCGAACGCGTCGGCAACGACTTCATTATTATCTACCGACTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACCATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGATATGGTATCGATGGCGCGACCGTTTCTTGCTGATGCGGAGCTGCTGTCAAAAGCGCAATCGGGACGAGCCGATGAGATCAACACTTGTATTGGCTGCAATCAGGCCTGTCTCGATCAAATCTTCGTTGGCAAAGTCACCTCGTGCCTGGTGAATCCTCGCGCCTGCCACGAAACCAAAATGCCAATCCTTCCCGCCGTGCAGAAAAAAAATCTGGCGGTGGTCGGTGCGGGACCTGCTGGGCTGGCGTTTGCCATTAACGCGGCGGCGCGTGGGCATCAGGTAACATTGTTTGACGCTCATAGCGAGATTGGCGGGCAGTTTAATATCGCCAAACAGATCCCCGGCAAAGAGGAGTTTTACGAAACGCTGCGCTATTACCGCCGGATGATCGAAGTGACGGGCGTGACGCTAAAACTCAATCACACCGTGACGGCGGATCAGTTACAGGCTTTCGATGAAACGATCCTCGCCAGTGGGATCGTGCCGCGCACTCCGCCCATCGACGGGATCGATCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTTCTGTAATGAATGGGGGATCGACAGTAGCCTACAACAGGCTGGTGGCTTAAGCCCGCAGGGAATGCAGATCCCCCGTAGCCCACGGCAGATTGTGATGCTCCAGCGCAAAGCCAGCAAACCAGGACAGGGGTTAGGCAAAACCACCGGCTGGATCCATCGCACCACCCTGCTCTCGCGGGGTGTGAAAATGATCCCAGGCGTAAGTTATCAGAAGATTGACGATGACGGGCTGCATGTGGTGATCAACGGCGAAACGCAGGTATTAGCAGTGGACAATGTGGTGATCTGCGCAGGGCAAGAGCCAAACCGCGCGCTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAA", + "dna_sequence_length": 2019, + "functions": [ + "2,4-dienoyl-CoA reductase, NADH and FMN-linked" + ], + "id": "CDS_3031", + "location": [ + [ + "NC_000913", + 3231665, + "+", + 2019 + ] + ], + "md5": "dcb4c0ca731c9b5ee8e57a73ba7d2e8c", + "parent_gene": "", + "protein_md5": "2afeca3cbb17b27e3b293646b2d8ece8", + "protein_translation": "MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI", + "protein_translation_length": 672, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010126" + ], + [ + "gene_synonym", + "ECK3072" + ], + [ + "gene_synonym", + "EcoGene:EG12724" + ], + [ + "gene_synonym", + "GI:16130977" + ], + [ + "gene_synonym", + "GeneID:947593" + ], + [ + "gene_synonym", + "JW3053" + ], + [ + "gene_synonym", + "NP_417553.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67701" + ], + [ + "gene_synonym", + "b3082" + ], + [ + "gene_synonym", + "higA" + ], + [ + "gene_synonym", + "ygjM" + ] + ], + "dna_sequence": "ATGATTGCGATTGCCGACATCTTGCAAGCAGGAGAAAAGCTAACTGCTGTGGCACCTTTTCTGGCGGGTATTCAGAACGAGGAACAATACACCCAGGCGCTGGAACTGGTAGATCATCTGCTGCTCAACGATCCTGAAAACCCCTTGCTGGATCTGGTGTGTGCCAAAATAACCGCGTGGGAAGAATCAGCGCCCGAATTTGCGGAATTTAATGCCATGGCTCAAGCCATGCCTGGCGGTATAGCCGTGATTCGTACCCTTATGGATCAATATGGTTTAACCCTTTCCGATCTGCCGGAAATTGGCAGTAAATCTATGGTGTCACGCGTTTTGAGCGGGAAGAGGAAATTAACGCTGGAACACGCTAAAAAATTGGCAACGCGATTCGGCATTTCTCCCGCCTTGTTTATTGATTAA", + "dna_sequence_length": 417, + "functions": [ + "antitoxinof the HigB-HigA toxin-antitoxin system" + ], + "id": "CDS_3032", + "location": [ + [ + "NC_000913", + 3234144, + "-", + 417 + ] + ], + "md5": "81181b6e21249909808f2b55be2d54a6", + "parent_gene": "", + "protein_md5": "46394d8005da3d75cb3a9c4665a02bdc", + "protein_translation": "MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010128" + ], + [ + "gene_synonym", + "ECK3073" + ], + [ + "gene_synonym", + "EcoGene:EG12725" + ], + [ + "gene_synonym", + "GI:16130978" + ], + [ + "gene_synonym", + "GeneID:947591" + ], + [ + "gene_synonym", + "JW3054" + ], + [ + "gene_synonym", + "NP_417554.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64578" + ], + [ + "gene_synonym", + "b3083" + ], + [ + "gene_synonym", + "higB" + ], + [ + "gene_synonym", + "ygjN" + ] + ], + "dna_sequence": "ATGCACCTGATAACTCAAAAAGCATTGAAAGATGCTGCGGAAAAATACCCGCAACATAAAACGGAGTTGGTGGCTCTGGGGAACACGATTGCTAAGGGATATTTCAAAAAACCTGAGTCATTAAAAGCAGTATTCCCATCTCTGGATAACTTCAAATATCTGGATAAGCATTATGTTTTCAATGTTGGGGGCAATGAATTACGTGTTGTAGCAATGGTCTTTTTTGAATCGCAAAAGTGCTACATACGTGAAGTTATGACGCATAAAGAATACGATTTCTTTACCGCTGTTCATCGTACTAAGGGGAAAAAATGA", + "dna_sequence_length": 315, + "functions": [ + "mRNA interferase toxin of the HigB-HigA toxin-antitoxin system" + ], + "id": "CDS_3033", + "location": [ + [ + "NC_000913", + 3234455, + "-", + 315 + ] + ], + "md5": "8c04f8d4db1125f5100972a8c2fe27fb", + "parent_gene": "", + "protein_md5": "29c05b8702cd93fa00920db899d0db99", + "protein_translation": "MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010133" + ], + [ + "gene_synonym", + "ECK3074" + ], + [ + "gene_synonym", + "EcoGene:EG12726" + ], + [ + "gene_synonym", + "GI:90111535" + ], + [ + "gene_synonym", + "GeneID:947589" + ], + [ + "gene_synonym", + "JW5513" + ], + [ + "gene_synonym", + "NP_417555.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42596" + ], + [ + "gene_synonym", + "b3084" + ], + [ + "gene_synonym", + "rlmG" + ], + [ + "gene_synonym", + "rsmD" + ], + [ + "gene_synonym", + "ygjO" + ] + ], + "dna_sequence": "ATGAGCCACTTAGACAACGGTTTCCGTTCACTGACACTACAACGTTTTCCGGCGACGGATGACGTTAACCCGCTACAGGCGTGGGAAGCGGCGGATGAATATTTGCTGCAACAGTTGGACGACACAGAAATCCGCGGCCCGGTGTTGATCCTGAATGATGCCTTTGGTGCGTTAAGCTGCGCACTGGCGGAACATAAGCCGTACAGCATTGGCGACTCATACATCAGTGAACTGGCGACGCGCGAGAATTTACGCCTCAACGGGATTGATGAGTCGAGCGTGAAGTTTCTCGACAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGATCAAAGTGCCGAAAACACTGGCATTGCTGGAACAGCAACTGCGTGCGCTGCGCAAAGTGGTCACGTCGGATACACGTATTATTGCCGGTGCCAAGGCCCGTGACATTCACACTTCCACGCTGGAACTGTTCGAAAAAGTGCTCGGCCCAACCACCACCACGCTGGCATGGAAAAAAGCGCGCCTGATTAATTGCACTTTCAATGAACCGCAGCTGGCCGATGCGCCGCAGACCGTTAGCTGGAAGCTGGAAGGTACTGACTGGACTATCCACAACCATGCGAATGTCTTCTCCCGCACCGGGCTTGATATCGGCGCGCGCTTCTTTATGCAACATCTGCCAGAGAATCTCGAAGGGGAGATTGTCGATCTCGGTTGCGGTAATGGCGTTATTGGTCTGACGCTGCTTGATAAAAACCCGCAGGCGAAAGTGGTGTTTGTCGATGAATCGCCGATGGCGGTTGCTTCCAGCCGTTTGAACGTTGAAACCAACATGCCAGAGGCGTTGGATCGCTGCGAGTTTATGATCAACAACGCGCTCTCCGGCGTGGAGCCTTTCCGCTTTAATGCTGTGCTCTGCAACCCGCCGTTTCACCAACAACATGCGCTGACCGATAACGTCGCCTGGGAGATGTTCCACCACGCCCGCCGCTGCCTGAAAATCAACGGCGAGCTGTATATCGTTGCCAACCGTCACCTGGATTACTTCCATAAACTGAAGAAGATTTTCGGCAACTGCACCACTATTGCGACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAA", + "dna_sequence_length": 1137, + "functions": [ + "23S rRNA m(2)G1835 methyltransferase, SAM-dependent" + ], + "id": "CDS_3034", + "location": [ + [ + "NC_000913", + 3235875, + "-", + 1137 + ] + ], + "md5": "e253abf0c9bb2cb09ab21692f9fe69ff", + "parent_gene": "", + "protein_md5": "4b7adc514f3ad659020561040ab198f2", + "protein_translation": "MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010138" + ], + [ + "gene_synonym", + "ECK3075" + ], + [ + "gene_synonym", + "EcoGene:EG12727" + ], + [ + "gene_synonym", + "GI:90111536" + ], + [ + "gene_synonym", + "GeneID:947650" + ], + [ + "gene_synonym", + "JW5514" + ], + [ + "gene_synonym", + "NP_417556.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42597" + ], + [ + "gene_synonym", + "b3085" + ], + [ + "gene_synonym", + "ygjP" + ] + ], + "dna_sequence": "ATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCGAACACTGATTAACGAACAGCGTCTGGGCGATGTGCTGGCAAAACGCTATCCGGGAACACACGACTACGCCACCGATAAAGCCCTCTGGCAATATACTCAGGATCTGAAAAATCAGTTTCTGCGTAATGCCCCGCCGATCAATAAAGTGATGTATGACAATAAGATCCATGTGCTAAAAAACGCGCTCGGGTTACATACCGCTGTTTCTCGTGTGCAGGGCGGCAAGCTGAAAGCAAAGGTGGAGATCCGCGTCGCTACCGTGTTTCGCAACGCGCCGGAACCGTTTTTGCGCATGATCGTGGTGCACGAGCTGGCGCACCTGAAGGAGAAAGAGCATAACAAAGCGTTTTACCAGTTGTGTTGTCATATGGAACCCCAGTACCACCAGCTTGAGTTCGACACCCGACTGTGGCTAACGCAGTTGTCGCTTGGGCAGAACAAAATCTGA", + "dna_sequence_length": 504, + "functions": [ + "putative metal dependent hydrolase" + ], + "id": "CDS_3035", + "location": [ + [ + "NC_000913", + 3235960, + "+", + 504 + ] + ], + "md5": "6442f65522780605ee768afadbb715cb", + "parent_gene": "", + "protein_md5": "e11ec548a79753999e550101197c400f", + "protein_translation": "MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQNKI", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010142" + ], + [ + "gene_synonym", + "ECK3076" + ], + [ + "gene_synonym", + "EcoGene:EG12728" + ], + [ + "gene_synonym", + "GI:16130981" + ], + [ + "gene_synonym", + "GeneID:947598" + ], + [ + "gene_synonym", + "JW3057" + ], + [ + "gene_synonym", + "NP_417557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42598" + ], + [ + "gene_synonym", + "b3086" + ], + [ + "gene_synonym", + "ygjQ" + ] + ], + "dna_sequence": "ATGCTGCGCGCATTTGCCCGCCTTCTTCTCCGTATTTGTTTTTCTCGCCGGACTCTAAAGATTGCCTGCTTACTGTTACTTGTGGCAGGAGCGACCATCCTTATCGCCGATCGCGTAATGGTCAACGCCAGCAAACAGCTGACCTGGAGCGATGTCAACGCCGTTCCGGCGCGTAACGTGGGTTTATTGCTGGGGGCGAGGCCGGGTAATCGCTACTTTACCCGACGTATTGATACCGCAGCAGCGTTGTACCACGCCGGAAAAGTGAAATGGCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTGCCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAA", + "dna_sequence_length": 693, + "functions": [ + "DUF218 superfamily protein" + ], + "id": "CDS_3036", + "location": [ + [ + "NC_000913", + 3236540, + "+", + 693 + ] + ], + "md5": "166aaa4b54e8be0df769456c50f15a7c", + "parent_gene": "", + "protein_md5": "04c481f17b924655e766588a3afcc79c", + "protein_translation": "MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010148" + ], + [ + "gene_synonym", + "ECK3077" + ], + [ + "gene_synonym", + "EcoGene:EG12729" + ], + [ + "gene_synonym", + "GI:145698311" + ], + [ + "gene_synonym", + "GeneID:947600" + ], + [ + "gene_synonym", + "JW3058" + ], + [ + "gene_synonym", + "NP_417558.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42599" + ], + [ + "gene_synonym", + "b3087" + ], + [ + "gene_synonym", + "ygjR" + ] + ], + "dna_sequence": "ATGATACGTTTCGCTGTGATTGGTACGAACTGGATCACTCGCCAGTTCGTCGAGGCCGCCCATGAGAGCGGTAAATACAAGTTAACCGCCGTATATTCCCGCAGCCTTGAACAGGCCCAGCACTTCGCCAATGATTTTTCTGTCGAGCATCTGTTTACCTCGCTGGAAGCGATGGCGGAAAGCGATGCCATTGACGCGGTGTATATTGCCAGCCCGAATTCCCTGCATTTTTCCCAGACACAACTTTTCCTTAGCCATAAAATTAATGTGATTTGCGAGAAACCGCTGGCGTCGAATCTGGCGGAAGTGGATGCCGCCATTGCCTGTGCGCGGGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACCGCCTGCCTGCCGAACTTTCATTTGTTGCGCCAGGCGCTGCCGAAAGTCGGCAAACTGCGGAAAGTCTTTTTCAACTATTGCCAGTATTCCTCGCGGTATCAACGTTACCTGGATGGTGAGAATCCCAACACCTTTAATCCGGCATTCTCTAACGGTTCAATTATGGATATCGGTTTTTACTGTCTGGCGTCGGCGGTGGCGTTATTTGGTGAGCCGAAAAGCGTGCAGGCAACCGCCAGTTTGCTGGCAAGCGGCGTTGACGCCCAGGGCGTGGTGGTGATGGATTACGGTGATTTCAGCGTCACCTTGCAGCACTCAAAAGTCAGTGATTCTGTCCTGGCGAGCGAGATTCAGGGCGAAGCAGGATCGCTGGTGATTGAAAAACTGTCTGAATGCCAGAAAGTGTGCTTCGTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAA", + "dna_sequence_length": 987, + "functions": [ + "putative NAD(P)-dependent dehydrogenase" + ], + "id": "CDS_3037", + "location": [ + [ + "NC_000913", + 3237311, + "+", + 987 + ] + ], + "md5": "1ac6b74706e8a9cba02ac096f9fa40ff", + "parent_gene": "", + "protein_md5": "25aacea418fe48b72817a73403749874", + "protein_translation": "MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010151" + ], + [ + "gene_synonym", + "ECK3079" + ], + [ + "gene_synonym", + "EcoGene:EG12731" + ], + [ + "gene_synonym", + "GI:49176311" + ], + [ + "gene_synonym", + "GeneID:947607" + ], + [ + "gene_synonym", + "JW5515" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42601" + ], + [ + "gene_synonym", + "YP_026201.1" + ], + [ + "gene_synonym", + "alx" + ], + [ + "gene_synonym", + "b3088" + ], + [ + "gene_synonym", + "ygjT" + ] + ], + "dna_sequence": "ATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACCATGAAACAGGCTGCGGCCTGGTCGCTGGTCTGGGTGACGCTGTCGTTACTGTTTAACGCCGCTTTCTGGTGGTATCTGGTGCAAACCGAAGGTCGCGCCGTTGCCGATCCACAGGCACTGGCCTTTCTCACAGGTTATCTGATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGATTCTGGTGGAATTGAGCGACGTGATTTTCGCCGTGGATAGCATTCCGGCTATCTTCGCCGTGACCACTGACCCGTTCATTGTGCTGACCTCAAACCTGTTTGCGATCCTCGGCCTGCGTGCGATGTATTTCCTGCTGGCGGGCGTAGCAGAGCGTTTCTCGATGCTCAAATATGGCCTGGCGGTGATTCTGGTGTTTATCGGTATCAAGATGCTGATTGTCGACTTCTACCATATTCCAATCGCCGTCTCGCTGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAA", + "dna_sequence_length": 966, + "functions": [ + "putative membrane-bound redox modulator" + ], + "id": "CDS_3038", + "location": [ + [ + "NC_000913", + 3238580, + "+", + 966 + ] + ], + "md5": "6c0192b099ba0ca95032d900dc4a0ce8", + "parent_gene": "", + "protein_md5": "24c4f8cab04028b26f3c946b6acbbb3d", + "protein_translation": "MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010159" + ], + [ + "gene_synonym", + "ECK3080" + ], + [ + "gene_synonym", + "EcoGene:EG12732" + ], + [ + "gene_synonym", + "GI:16130984" + ], + [ + "gene_synonym", + "GeneID:947605" + ], + [ + "gene_synonym", + "JW3060" + ], + [ + "gene_synonym", + "NP_417560.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE4" + ], + [ + "gene_synonym", + "b3089" + ], + [ + "gene_synonym", + "sstT" + ], + [ + "gene_synonym", + "ygjU" + ] + ], + "dna_sequence": "ATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCCGCGGCGGAAGCTGTTGGTCTGTTAGGTACTTTGTTCGTCGGCGCACTGAAAGCCGTTGCCCCCATCCTGGTGTTGATGCTGGTGATGGCATCTATTGCTAACCACCAGCACGGGCAGAAAACCAATATCCGCCCTATTTTGTTCCTCTATCTACTGGGCACCTTCTCTGCTGCTCTGGCCGCAGTAGTCTTCAGCTTTGCCTTCCCTTCTACCCTGCATTTATCCAGTAGCGCGGGTGATATTTCGCCGCCGTCAGGCATTGTCGAAGTGATGCGCGGGCTGGTAATGAGCATGGTTTCCAACCCCATCGACGCGCTGCTGAAAGGTAACTACATCGGGATTCTGGTGTGGGCGATCGGCCTCGGCTTCGCACTGCGTCACGGTAACGAGACCACCAAAAACCTGGTTAACGATATGTCGAATGCCGTTACCTTTATGGTGAAACTGGTCATTCGCTTCGCACCGATTGGTATTTTTGGGCTGGTTTCTTCTACCCTGGCAACCACCGGTTTCTCCACACTGTGGGGCTACGCGCAACTGCTGGTCGTGCTGGTTGGCTGTATGTTACTGGTGGCGCTGGTGGTTAACCCATTGCTGGTGTGGTGGAAAATTCGTCGTAACCCGTTCCCGCTGGTGCTGCTGTGCCTGCGCGAAAGCGGTGTGTATGCCTTCTTCACCCGCAGCTCTGCAGCGAACATTCCGGTGAATATGGCGCTGTGTGAAAAGCTGAATCTGGATCGCGATACCTATTCCGTTTCTATTCCGCTGGGAGCCACCATCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAA", + "dna_sequence_length": 1245, + "functions": [ + "sodium:serine/threonine symporter" + ], + "id": "CDS_3039", + "location": [ + [ + "NC_000913", + 3239944, + "+", + 1245 + ] + ], + "md5": "83a44e1f7e401655c5696e6197a73a71", + "parent_gene": "", + "protein_md5": "efe214b8057415f7acec0db41016c74e", + "protein_translation": "MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN", + "protein_translation_length": 414, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010161" + ], + [ + "gene_synonym", + "ECK3081" + ], + [ + "gene_synonym", + "EcoGene:EG12733" + ], + [ + "gene_synonym", + "GI:16130985" + ], + [ + "gene_synonym", + "GeneID:947604" + ], + [ + "gene_synonym", + "JW3061" + ], + [ + "gene_synonym", + "NP_417561.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42603" + ], + [ + "gene_synonym", + "b3090" + ], + [ + "gene_synonym", + "ygjV" + ] + ], + "dna_sequence": "ATGACCGCGTATTGGCTGGCCCAGGGCGTGGGTGTCATCGCCTTTCTGATTGGTATCACAACATTTTTCAATCGTGACGAACGTCGCTTCAAAAAGCAGCTTTCGGTCTATAGCGCCGTTATTGGCGTACATTTTTTTCTTCTGGGCACCTATCCCGCTGGTGCCAGTGCCATCCTTAATGCCATTCGTACATTGATTACCTTACGCACGCGCAGCTTATGGGTAATGGCGATTTTTATTGTGCTGACTGGCGGAATTGGCCTCGCGAAGTTCCATCATCCTGTCGAACTATTGCCGGTTATCGGCACGATTGTCAGTACCTGGGCGCTATTCTGCTGTAAAGGGCTGACCATGCGCTGCGTAATGTGGTTTTCAACGTGTTGCTGGGTGATTCACAACTTCTGGGCGGGGTCGATAGGCGGCACGATGATTGAGGGTAGTTTTCTGCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTAA", + "dna_sequence_length": 552, + "functions": [ + "Imp-YgjV family inner membrane protein" + ], + "id": "CDS_3040", + "location": [ + [ + "NC_000913", + 3241744, + "-", + 552 + ] + ], + "md5": "e6879ba45c58ca299763f01ac8d54871", + "parent_gene": "", + "protein_md5": "bf0a6dad265624be60176502562e7cfe", + "protein_translation": "MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVHFFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIGTIVSTWALFCCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFWRMQKRGIDPFKVEKTPSAVDERG", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010164" + ], + [ + "gene_synonym", + "ECK3082" + ], + [ + "gene_synonym", + "EcoGene:EG12734" + ], + [ + "gene_synonym", + "GI:16130986" + ], + [ + "gene_synonym", + "GeneID:947603" + ], + [ + "gene_synonym", + "JW3062" + ], + [ + "gene_synonym", + "NP_417562.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42604" + ], + [ + "gene_synonym", + "b3091" + ], + [ + "gene_synonym", + "uxaA" + ], + [ + "gene_synonym", + "ygjW" + ] + ], + "dna_sequence": "ATGCAATACATCAAGATCCATGCGCTGGATAACGTCGCGGTCGCTTTAGCAGATTTGGCTGAAGGCACAGAAGTCAGTGTCGATAACCAGACTGTTACGCTGCGCCAGGATGTTGCTCGTGGACATAAATTTGCGTTAACGGATATCGCAAAAGGGGCCAATGTCATCAAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATCGTGAAGTGCAGATCTATCGTCGCGCTAACGGCGATGTCGGGGTGCGTAATGAGCTGTGGATCCTGCCAACCGTGGGCTGTGTCAACGGCATCGCGCGGCAGATCCAGAACCGTTTTCTGAAAGAGACCAACAACGCCGAAGGTACTGACGGCGTGTTCCTCTTCAGCCACACCTACGGCTGCTCACAGCTGGGCGACGATCACATTAATACCCGCACCATGCTGCAAAACATGGTGCGCCACCCGAACGCAGGCGCAGTGCTGGTGATTGGTCTGGGCTGTGAAAACAACCAGGTTGCCGCATTCCGTGAAACGCTGGGCGATATCGATCCTGAACGCGTTCATTTCATGATCTGCCAACAGCAGGATGATGAGATCGAAGCCGGAATCGAGCATTTGCATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGGAGTGCGGTGGTTCTGACGGTCTTTCTGGTATTACTGCTAACCCGATGCTGGGGCGTTTCTCTGACTACGTGATTGCTAACGGCGGTACTACCGTACTGACCGAAGTGCCGGAGATGTTTGGCGCAGAGCAGTTGCTGATGGACCATTGCCGCGACGAAGCAACGTTTGAAAAACTGGTCACCATGGTCAACGACTTCAAACAGTACTTTATTGCCCATGATCAGCCGATCTATGAAAACCCATCGCCGGGGAACAAAGCGGGCGGTATCACCACGCTGGAAGACAAATCACTTGGCTGTACCCAGAAAGCGGGTTCCAGCGTCGTGGTTGACGTGCTGCGTTACGGCGAGCGTCTGAAAACGCCAGGGCTGAACTTGTTAAGTGCGCCGGGTAACGATGCCGTAGCGACCAGCGCCCTGGCGGGTGCGGGCTGCCATATGGTGCTGTTCAGTACTGGTCGTGGCACGCCGTATGGTGGATTTGTGCCGACGGTGAAAATCGCCACCAACAGTGAACTGGCGGCGAAGAAAAAACACTGGATCGACTTTGACGCGGGTCAGTTGATCCACGGTAAAGCGATGCCGCAGTTGCTGGAAGAATTTATCGACACCATCGTTGAGTTTGCCAACGGTAAGCAAACCTGTAACGAGCGTAACGACTTCCGCGAACTGGCGATCTTCAAAAGCGGCGTAACGCTATAA", + "dna_sequence_length": 1488, + "functions": [ + "altronate hydrolase" + ], + "id": "CDS_3041", + "location": [ + [ + "NC_000913", + 3243314, + "-", + 1488 + ] + ], + "md5": "b076962fa126cfe040d7d522f45dd382", + "parent_gene": "", + "protein_md5": "cc63ccb0cace0874f345f5025aa13d41", + "protein_translation": "MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGLPIGYALADIAAGVHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010167" + ], + [ + "gene_synonym", + "ECK3083" + ], + [ + "gene_synonym", + "EcoGene:EG12737" + ], + [ + "gene_synonym", + "GI:16130987" + ], + [ + "gene_synonym", + "GeneID:947599" + ], + [ + "gene_synonym", + "JW3063" + ], + [ + "gene_synonym", + "NP_417563.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8G3" + ], + [ + "gene_synonym", + "b3092" + ], + [ + "gene_synonym", + "uxaC" + ], + [ + "gene_synonym", + "ygjX" + ], + [ + "gene_synonym", + "ygjY" + ], + [ + "gene_synonym", + "ygjZ" + ] + ], + "dna_sequence": "ATGACTCCGTTTATGACTGAAGATTTCCTGTTAGATACCGAATTTGCCCGCCGTCTGTATCACGACTACGCAAAAGACCAGCCGATTTTCGATTACCATTGCCATTTGCCGCCGCAGCAGATTGCGGAAGACTATCGTTTTAAAAACCTGTATGACATCTGGCTGAAAGGCGATCACTACAAATGGCGCGCTATGCGTACCAACGGTGTGGCCGAGCGTCTGTGTACCGGTGATGCGTCTGACCGTGAAAAATTTGACGCCTGGGCGGCGACTGTTCCGCACACTATCGGCAACCCGTTATACCACTGGACGCACCTCGAACTGCGCCGTCCGTTTGGTATCACTGGCAAATTGCTTTCTCCGTCAACTGCCGATGAAATCTGGAACGAATGTAACGAACTGCTGGCGCAGGATAACTTCTCCGCGCGCGGCATCATGCAGCAGATGAACGTGAAAATGGTCGGCACCACCGATGACCCGATCGATTCTCTGGAGCATCACGCAGAGATCGCCAAAGACGGCTCTTTCACCATCAAAGTGCTGCCGAGCTGGCGTCCGGACAAAGCCTTCAACATCGAACAGGCGACCTTTAACGACTACATGGCGAAGCTGGGCGAAGTTTCCGATACCGACATTCGCCGCTTTGCTGACCTGCAAACTGCCCTGACCAAACGTCTGGATCACTTCGCCGCTCACGGCTGTAAAGTGTCTGACCACGCGCTGGATGTGGTGATGTTTGCTGAAGCGAACGAAGCGGAACTGGACAGCATTCTGGCGCGCCGTCTGGCTGGCGAAACCCTGAGCGAGCACGAAGTGGCGCAGTTCAAAACTGCGGTACTGGTGTTCCTTGGTGCCGAATATGCACGTCGCGGCTGGGTACAGCAGTACCACATTGGCGCGCTGCGTAATAACAACCTGCGTCAGTTCAAACTGCTGGGGCCGGATGTAGGCTTTGACTCCATCAACGACCGTCCGATGGCGGAAGAGCTGTCTAAGTTGCTGAGCAAGCAGAATGAAGAAAACCTGCTGCCGAAAACCATTCTGTACTGCCTGAACCCGCGCGATAACGAAGTGCTGGGCACCATGATCGGTAACTTCCAGGGCGAAGGTATGCCGGGCAAAATGCAGTTCGGTTCCGGCTGGTGGTTTAACGATCAGAAAGACGGTATGGAACGTCAGATGACCCAACTGGCGCAGCTCGGTCTGCTGAGCCGCTTTGTCGGTATGCTGACTGACAGCCGTAGCTTCCTGTCATACACCCGTCACGAATACTTCCGCCGCATTCTGTGCCAGATGATCGGTCGCTGGGTGGAAGCGGGCGAAGCACCGGCGGACATCAACCTGCTGGGCGAGATGGTGAAAAATATTTGCTTTAACAATGCGCGTGACTACTTCGCCATTGAACTGAACTAA", + "dna_sequence_length": 1413, + "functions": [ + "uronate isomerase" + ], + "id": "CDS_3042", + "location": [ + [ + "NC_000913", + 3244741, + "-", + 1413 + ] + ], + "md5": "70a88496742c0a662cecc35123d23acc", + "parent_gene": "", + "protein_md5": "362ca19ec97b6ac525bd34a13e2a82da", + "protein_translation": "MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010171" + ], + [ + "gene_synonym", + "ECK3084" + ], + [ + "gene_synonym", + "EcoGene:EG12738" + ], + [ + "gene_synonym", + "GI:674842734" + ], + [ + "gene_synonym", + "GeneID:947601" + ], + [ + "gene_synonym", + "JW3064" + ], + [ + "gene_synonym", + "NP_417564.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA78" + ], + [ + "gene_synonym", + "b3093" + ], + [ + "gene_synonym", + "exuT" + ] + ], + "dna_sequence": "ATGCGTAAAATTAAAGGGTTACGTTGGTATATGATCGCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACGAAAATCGGTTATGCAATGTTTGCTGTGCTGTGGGCCGTGTTCTGTGGTGCAACCGCGCTGGCAGGTAGCTGGGGTGGCCTGGCTGTTGCTCGTGGTGCGGTCGGTGCCGCGGAAGCAGCGATGATCCCGGCGGGTCTGAAAGCCAGCTCCGAATGGTTCCCGGCGAAAGAGCGTTCCATCGCAGTAGGCTACTTTAACGTAGGTTCTTCGATTGGTGCGATGATTGCGCCGCCGCTGGTGGTATGGGCAATCGTAATGCACAGCTGGCAGATGGCATTTATCATCTCCGGTGCATTGAGCTTTATCTGGGCGATGGCATGGCTGATTTTCTATAAACATCCGCGCGACCAGAAGCATCTGACCGATGAAGAACGCGACTATATTATTAATGGTCAGGAAGCCCAGCACCAGGTGAGCACGGCGAAGAAAATGTCCGTTGGTCAGATCCTGCGTAACCGTCAGTTCTGGGGTATCGCGCTGCCGCGTTTCCTGGCAGAACCGGCCTGGGGTACTTTTAACGCGTGGATCCCGCTGTTCATGTTTAAAGTTTACGGCTTTAACCTGAAAGAGATCGCGATGTTCGCCTGGATGCCGATGCTGTTTGCTGACCTCGGTTGTATCCTCGGTGGTTACCTGCCGCCGCTGTTCCAGCGTTGGTTTGGTGTGAACCTGATCGTTTCCCGTAAGATGGTCGTAACGCTGGGTGCAGTGCTGATGATTGGCCCGGGTATGATCGGCCTGTTCACCAACCCGTATGTCGCAATTATGCTGCTGTGTATCGGTGGTTTTGCCCACCAGGCACTGTCTGGCGCGCTGATTACGCTCTCTTCCGATGTGTTTGGTCGTAACGAAGTGGCAACGGCAAACGGTTTAACCGGGATGTCCGCATGGCTGGCAAGTACGCTGTTTGCGCTGGTTGTCGGTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTGTTCGACCTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAA", + "dna_sequence_length": 1299, + "functions": [ + "hexuronate transporter" + ], + "id": "CDS_3043", + "location": [ + [ + "NC_000913", + 3245224, + "+", + 1299 + ] + ], + "md5": "7fe78101208ba56a0cc9f1e929d6d261", + "parent_gene": "", + "protein_md5": "90c1c4f93ae3ffca3ccee675ac6758e0", + "protein_translation": "MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAVARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEVAQETHNDPAPQH", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010176" + ], + [ + "gene_synonym", + "ECK3085" + ], + [ + "gene_synonym", + "EcoGene:EG12739" + ], + [ + "gene_synonym", + "GI:90111537" + ], + [ + "gene_synonym", + "GeneID:947602" + ], + [ + "gene_synonym", + "JW3065" + ], + [ + "gene_synonym", + "NP_417565.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACL2" + ], + [ + "gene_synonym", + "b3094" + ], + [ + "gene_synonym", + "exuR" + ] + ], + "dna_sequence": "ATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAATATTGCCGAATTCGCGGCAACTCAGGTAACGAAACAGGACATCATGAAACTGATGGCCATTCAGGAACAGGCGCGCGGCGAACAATGCTTCCGTGATTCCGAGTGGGATTTGCAGTTCCACATTCAGGTCGCTCTGGCGACGCAGAACTCCGCCCTGGCGGCTATCGTGGAAAAAATGTGGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAAGCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGA", + "dna_sequence_length": 777, + "functions": [ + "hexuronate regulon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_3044", + "location": [ + [ + "NC_000913", + 3246652, + "+", + 777 + ] + ], + "md5": "e0109bfec5f9cbb9a61215a7ef9f850c", + "parent_gene": "", + "protein_md5": "022fb3f73dae00ef40aaa4e42ab852b8", + "protein_translation": "MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQLIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010181" + ], + [ + "gene_synonym", + "ECK3086" + ], + [ + "gene_synonym", + "EcoGene:EG12740" + ], + [ + "gene_synonym", + "GI:16130990" + ], + [ + "gene_synonym", + "GeneID:947643" + ], + [ + "gene_synonym", + "JW3066" + ], + [ + "gene_synonym", + "NP_417566.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA63" + ], + [ + "gene_synonym", + "b3095" + ], + [ + "gene_synonym", + "ecfL" + ], + [ + "gene_synonym", + "yqjA" + ] + ], + "dna_sequence": "ATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCGGGTTATCAGGGCTGAATAACGCGCGCTTTCAGTTTTTCAACTGGATGAGCGGTCTGCTGTGGGTATTGATCCTGACAACTCTGGGTTACATGCTCGGCAAAACGCCGGTATTTTTAAAGTACGAGGACCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGTAA", + "dna_sequence_length": 663, + "functions": [ + "general envelope maintenance protein", + "DedA family inner membrane protein", + "putative multidrug efflux transporter" + ], + "id": "CDS_3045", + "location": [ + [ + "NC_000913", + 3247773, + "+", + 663 + ] + ], + "md5": "7002d05aa732fe8f5e547dbc51fface3", + "parent_gene": "", + "protein_md5": "c73ca6950ef645f2f22a23b5c138d8f4", + "protein_translation": "MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLPAAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGNRG", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010183" + ], + [ + "gene_synonym", + "ECK3087" + ], + [ + "gene_synonym", + "EcoGene:EG12741" + ], + [ + "gene_synonym", + "GI:16130991" + ], + [ + "gene_synonym", + "GeneID:947619" + ], + [ + "gene_synonym", + "JW3067" + ], + [ + "gene_synonym", + "NP_417567.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42615" + ], + [ + "gene_synonym", + "b3096" + ], + [ + "gene_synonym", + "ecfM" + ], + [ + "gene_synonym", + "mzrA" + ], + [ + "gene_synonym", + "yqjB" + ] + ], + "dna_sequence": "ATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCATCACCTTGACGCTCATGGCATTCCTTTCAAAAGTATCACCCCCAAAAACGACACTCTGTTAATTACATTTGACTCCAGCGACCAGAGCGCCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGGCTATGCAGTGGCTGACCCGGTTACGGGATAACTCTCATCGCTTCGGATAA", + "dna_sequence_length": 384, + "functions": [ + "modulator of EnvZ/OmpR regulon" + ], + "id": "CDS_3046", + "location": [ + [ + "NC_000913", + 3248439, + "+", + 384 + ] + ], + "md5": "393e3fddd2ea5cc69b7bba02963311f9", + "parent_gene": "", + "protein_md5": "a13c3466ab65d56408638a9d2649c78a", + "protein_translation": "MQIPRMSLRQLAWSGAVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010188" + ], + [ + "gene_synonym", + "ECK3088" + ], + [ + "gene_synonym", + "EcoGene:EG12742" + ], + [ + "gene_synonym", + "GI:90111538" + ], + [ + "gene_synonym", + "GeneID:947622" + ], + [ + "gene_synonym", + "JW5516" + ], + [ + "gene_synonym", + "NP_417568.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42616" + ], + [ + "gene_synonym", + "b3097" + ], + [ + "gene_synonym", + "yqjC" + ] + ], + "dna_sequence": "ATGAAATACCGCATCGCTTTAGCTGTTTCTCTCTTTGCTCTTAGTGCCGGTAGTTATGCCACTACCCTGTGTCAGGAAAAGGAGCAAAATATCCTTAAGGAGATCAGCTATGCCGAAAAACACCAAAACCAGAATCGTATTGACGGTCTGAATAAAGCCCTGAGTGAAGTCCGGGCCAACTGTTCAGATAGCCAGCTGCGTGCCGATCATCAGAAGAAAATCGCAAAGCAGAAAGATGAGGTGGCGGAACGCCAGCAAGATTTAGCCGAGGCGAAGCAAAAAGGCGATGCCGATAAGATTGCCAAACGCGAACGGAAACTGGCAGAAGCGCAGGAAGAGCTGAAAAAGCTGGAAGCGCGCGACTACTAA", + "dna_sequence_length": 369, + "functions": [ + "DUF1090 family putative periplasmic protein" + ], + "id": "CDS_3047", + "location": [ + [ + "NC_000913", + 3248969, + "+", + 369 + ] + ], + "md5": "c2cf26581efb6cca65357e2a4e63d02b", + "parent_gene": "", + "protein_md5": "06d0c04686cf093876a7be5f2128f8f0", + "protein_translation": "MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEARDY", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010192" + ], + [ + "gene_synonym", + "ECK3089" + ], + [ + "gene_synonym", + "EcoGene:EG12743" + ], + [ + "gene_synonym", + "GI:16130993" + ], + [ + "gene_synonym", + "GeneID:947614" + ], + [ + "gene_synonym", + "JW3069" + ], + [ + "gene_synonym", + "NP_417569.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64581" + ], + [ + "gene_synonym", + "b3098" + ], + [ + "gene_synonym", + "yqjD" + ] + ], + "dna_sequence": "ATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGAAACCGGTGATGCCATTGCCAAACAAACCCGTGTCGCGGCGGCGCGTGCCGATGAGTATGTGCGCGAAAATCCGTGGACGGGCGTGGGCATTGGCGCTGCAATCGGTGTAGTGCTCGGCGTTCTGCTGTCGCGTCGTTAA", + "dna_sequence_length": 306, + "functions": [ + "membrane-anchored ribosome-binding protein" + ], + "id": "CDS_3048", + "location": [ + [ + "NC_000913", + 3249375, + "+", + 306 + ] + ], + "md5": "9ab1672e9e9e962155e6f2fc98389df1", + "parent_gene": "", + "protein_md5": "fa1a4201301f9503dd5d51aa06fb8a10", + "protein_translation": "MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010195" + ], + [ + "gene_synonym", + "ECK3090" + ], + [ + "gene_synonym", + "EcoGene:EG12744" + ], + [ + "gene_synonym", + "GI:16130994" + ], + [ + "gene_synonym", + "GeneID:947611" + ], + [ + "gene_synonym", + "JW3070" + ], + [ + "gene_synonym", + "NP_417570.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64585" + ], + [ + "gene_synonym", + "b3099" + ], + [ + "gene_synonym", + "yqjE" + ] + ], + "dna_sequence": "ATGGCGGACACTCATCACGCACAAGGGCCCGGTAAAAGCGTTCTGGGCATCGGGCAGCGAATTGTTTCTATCATGGTTGAAATGGTAGAGACACGTCTGCGGCTGGCGGTGGTGGAGCTGGAAGAGGAAAAAGCGAATCTCTTTCAACTTTTACTGATGCTGGGCCTGACGATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAA", + "dna_sequence_length": 405, + "functions": [ + "DUF1469 family inner membrane protein" + ], + "id": "CDS_3049", + "location": [ + [ + "NC_000913", + 3249683, + "+", + 405 + ] + ], + "md5": "b94e4e56048e1eae2f2b28fb22845a17", + "parent_gene": "", + "protein_md5": "3fa7e8669f303c3b972b1d59e67a7154", + "protein_translation": "MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010197" + ], + [ + "gene_synonym", + "ECK3091" + ], + [ + "gene_synonym", + "EcoGene:EG14314" + ], + [ + "gene_synonym", + "GI:16130995" + ], + [ + "gene_synonym", + "GeneID:947610" + ], + [ + "gene_synonym", + "JW3071" + ], + [ + "gene_synonym", + "NP_417571.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47710" + ], + [ + "gene_synonym", + "b3100" + ], + [ + "gene_synonym", + "yqjK" + ] + ], + "dna_sequence": "GTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGGAGACAACAGGCGCTTACGATCGTCGCTGGAATATGCTGCTAAGTCTGCGCTCCTGGGCGCTGGTTGGCAGTAGCGTGATGGCGATCTGGACGATTCGCCATCCTAATATGCTGGTCCGCTGGGCCAGACGCGGTTTTGGCGTATGGAGCGCCTGGCGTCTGGTTAAAACGACCCTCAAGCAGCAACAGCTTCGCGGTTAA", + "dna_sequence_length": 300, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3050", + "location": [ + [ + "NC_000913", + 3250077, + "+", + 300 + ] + ], + "md5": "65432858f6ba02443aacd294bdcfeb08", + "parent_gene": "", + "protein_md5": "676460489b514e5a61eeabe12a970d3c", + "protein_translation": "MSSKVERERRKAQLLSQIQQQRLDLSASRREWLETTGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010200" + ], + [ + "gene_synonym", + "ECK3092" + ], + [ + "gene_synonym", + "EcoGene:EG12745" + ], + [ + "gene_synonym", + "GI:90111539" + ], + [ + "gene_synonym", + "GeneID:947608" + ], + [ + "gene_synonym", + "JW5850" + ], + [ + "gene_synonym", + "NP_417572.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42619" + ], + [ + "gene_synonym", + "b3101" + ], + [ + "gene_synonym", + "yqjF" + ] + ], + "dna_sequence": "ATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCGCGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCGGGTTTTATGCTGCCACTGGTGATTCTGCTTGAGTTTGGTGGTGGTCTGGCAATCCTGTTCGGTTTCCTGACTCGCACCACAGCCCTGTTTACTGCGGGCTTTACGCTGCTGACGGCATTTTTATTTCACAGCAACTTTGCTGAAGGCGTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAA", + "dna_sequence_length": 393, + "functions": [ + "putative quinol oxidase subunit" + ], + "id": "CDS_3051", + "location": [ + [ + "NC_000913", + 3250562, + "+", + 393 + ] + ], + "md5": "f502d05cf9fd25eeb8014f868cd361a7", + "parent_gene": "", + "protein_md5": "57cdfd3896ab8ea7ca2141046ebb7fba", + "protein_translation": "MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010203" + ], + [ + "gene_synonym", + "ECK3093" + ], + [ + "gene_synonym", + "EcoGene:EG12746" + ], + [ + "gene_synonym", + "GI:16130997" + ], + [ + "gene_synonym", + "GeneID:947615" + ], + [ + "gene_synonym", + "JW3073" + ], + [ + "gene_synonym", + "NP_417573.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42620" + ], + [ + "gene_synonym", + "b3102" + ], + [ + "gene_synonym", + "yqjG" + ] + ], + "dna_sequence": "ATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCGATCCACACTACAGCGGACGAGTTACTGTTCCCGTGCTGTGGGACAAAAAGAACCACACCATCGTCAGCAACGAATCAGCAGAAATCATCCGCATGTTCAATACCGCGTTTGATGCGCTGGGCGCGAAAGCGGGTGATTACTACCCTCCAGCCCTGCAAACAAAAATTGACGAACTTAACGGCTGGATTTATGACACCGTTAACAACGGCGTGTATAAAGCTGGTTTTGCCACCAGCCAGGAAGCTTACGACGAGGCGGTGGCGAAAGTGTTTGAATCGCTGGCACGACTGGAGCAGATTTTAGGCCAGCATCGTTACCTGACCGGCAACCAGCTAACCGAAGCCGATATTCGCCTGTGGACTACGCTGGTGCGTTTTGATCCGGTGTATGTGACCCACTTCAAGTGTGATAAGCACCGCATCAGCGATTACCTGAATCTGTACGGTTTTCTGCGCGATATCTACCAGATGCCGGGGATCGCCGAAACAGTCAATTTCGATCATATCCGTAATCATTACTTCCGCAGCCATAAGACCATCAACCCTACGGGGATTATTTCAATTGGTCCGTGGCAGGATCTCGATGAACCGCATGGACGAGATGTTCGCTTCGGTTAA", + "dna_sequence_length": 987, + "functions": [ + "putative S-transferase" + ], + "id": "CDS_3052", + "location": [ + [ + "NC_000913", + 3251024, + "+", + 987 + ] + ], + "md5": "ab8834f37eb9c306343cb3feba897ab4", + "parent_gene": "", + "protein_md5": "33859abd93ad005a839c1c145e0e2e4a", + "protein_translation": "MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010207" + ], + [ + "gene_synonym", + "ECK3094" + ], + [ + "gene_synonym", + "EcoGene:EG12747" + ], + [ + "gene_synonym", + "GI:16130998" + ], + [ + "gene_synonym", + "GeneID:947617" + ], + [ + "gene_synonym", + "JW3074" + ], + [ + "gene_synonym", + "NP_417574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64590" + ], + [ + "gene_synonym", + "b3103" + ], + [ + "gene_synonym", + "yhaH" + ] + ], + "dna_sequence": "ATGGACTGGTATCTGAAAGTACTAAAAAATTATGTCGGTTTCCGGGGTCGTGCGCGGCGCAAAGAGTACTGGATGTTTATTCTGGTCAACATCATCTTTACGTTCGTGCTGGGGCTGCTGGATAAAATGTTAGGCTGGCAACGCGCTGGTGGCGAAGGCATCCTGACGACAATCTACGGTATTCTGGTGTTTTTACCGTGGTGGGCGGTTCAGTTCCGCCGCCTGCACGACACCGACCGCTCGGCGTGGTGGGCACTGCTATTCTTAATCCCGTTTATCGGCTGGCTTATTATCATCGTCTTTAACTGCCAGGCGGGTACGCCAGGCGAAAACCGCTTTGGACCAGATCCAAAACTGGAACCTTAA", + "dna_sequence_length": 366, + "functions": [ + "DUF805 family inner membrane protein" + ], + "id": "CDS_3053", + "location": [ + [ + "NC_000913", + 3252304, + "+", + 366 + ] + ], + "md5": "740278f4935b5feed8606917206b5abc", + "parent_gene": "", + "protein_md5": "5ff29563b74530a50780d9f4bebaa4b5", + "protein_translation": "MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010211" + ], + [ + "gene_synonym", + "ECK3095" + ], + [ + "gene_synonym", + "EcoGene:EG12748" + ], + [ + "gene_synonym", + "GI:16130999" + ], + [ + "gene_synonym", + "GeneID:947612" + ], + [ + "gene_synonym", + "JW3075" + ], + [ + "gene_synonym", + "NP_417575.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64592" + ], + [ + "gene_synonym", + "b3104" + ], + [ + "gene_synonym", + "yhaI" + ] + ], + "dna_sequence": "ATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAA", + "dna_sequence_length": 357, + "functions": [ + "DUF805 family inner membrane protein" + ], + "id": "CDS_3054", + "location": [ + [ + "NC_000913", + 3252911, + "+", + 357 + ] + ], + "md5": "4d71d9cc7e357d0a1343f3cc7ad00faa", + "parent_gene": "", + "protein_md5": "5457883fbb5e31e291642c74cdd194af", + "protein_translation": "MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010213" + ], + [ + "gene_synonym", + "ECK3096" + ], + [ + "gene_synonym", + "EcoGene:EG12749" + ], + [ + "gene_synonym", + "GI:16131000" + ], + [ + "gene_synonym", + "GeneID:947621" + ], + [ + "gene_synonym", + "JW3076" + ], + [ + "gene_synonym", + "NP_417576.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67660" + ], + [ + "gene_synonym", + "b3105" + ], + [ + "gene_synonym", + "yhaJ" + ] + ], + "dna_sequence": "ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGCCGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTACACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGTACCAAATTCACCAATGTCGGGAGGATGTTGTTGGAGCGAGGGCGCGTTTTGCTGGAAGCCGCAGATAAACTGACTACTGATGCGGAAGCTCTCGCGCGCGGTTGGGAAACGCATCTCACCATTGTGACCGAAGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCGGCAAAAGCCAATACCCAACTGGCAATCATCACAGAAGTGCTGGCGGGGGCGTGGGAACGGCTGGAGCAGGGGCGGGCGGATATTGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCGGAGATCAACTCGCGCAAGCTCTATACGTTAATGAACGTCTACGTTGCCGCGCCTGATCACCCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGTGTGAAATATCGTGGAATTGCGGTGGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAGCCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGCGTGGCGACGATGCCGTATCCTATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTCGTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATGGGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAACGGAAAATAA", + "dna_sequence_length": 897, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_3055", + "location": [ + [ + "NC_000913", + 3254214, + "-", + 897 + ] + ], + "md5": "d1e9e6f7e958678871a1108237018c12", + "parent_gene": "", + "protein_md5": "8a7deadc384129ada73c4d1e22f3408e", + "protein_translation": "MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010217" + ], + [ + "gene_synonym", + "ECK3097" + ], + [ + "gene_synonym", + "EcoGene:EG12750" + ], + [ + "gene_synonym", + "GI:16131001" + ], + [ + "gene_synonym", + "GeneID:947620" + ], + [ + "gene_synonym", + "JW3077" + ], + [ + "gene_synonym", + "NP_417577.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42624" + ], + [ + "gene_synonym", + "b3106" + ], + [ + "gene_synonym", + "yhaK" + ] + ], + "dna_sequence": "ATGATTACTACCCGAACTGCCAGGCAGTGTGGACAAGCAGACTACGGATGGTTGCAGGCCCGGTATACTTTTTCCTTTGGACACTACTTCGACCCGAAATTGTTAGGCTATGCCTCCCTGCGTGTGCTTAACCAGGAAGTGCTGGCCCCAGGTGCCGCCTTTCAGCCGCGAACCTATCCCAAAGTCGATATTTTAAATGTGATTCTGGATGGAGAAGCAGAGTATCGCGATAGCGAAGGCAATCATGTTCAGGCCAGCGCCGGAGAGGCGTTGCTGCTCTCTACCCAGCCGGGTGTCAGCTATAGCGAACACAATCTCAGCAAAGACAAACCGTTAACGCGAATGCAGCTTTGGCTGGACGCCTGCCCGCAGCGAGAGAATCCGCTGATTCAAAAGCTGGCGCTTAATATGGGCAAGCAGCAATTAATCGCCTCGCCAGAGGGTGCGATGGGAAGCCTGCAATTACGCCAGCAAGTGTGGCTGCACCATATCGTGCTCGACAAAGGCGAAAGTGCGAATTTCCAGTTGCATGGGCCACGCGCGTATTTGCAATCGATTCACGGGAAATTTCATGCGCTTACGCATCATGAAGAGAAAGCGGCGCTGACCTGCGGTGATGGGGCGTTTATTCGTGACGAGGCTAACATTACGCTGGTTGCCGATTCCCCACTGCGCGCTTTGCTGATAGATTTGCCTGTCTAG", + "dna_sequence_length": 702, + "functions": [ + "redox-sensitive bicupin" + ], + "id": "CDS_3056", + "location": [ + [ + "NC_000913", + 3254319, + "+", + 702 + ] + ], + "md5": "13f7b0dd822994fe99fead9e9e2898ca", + "parent_gene": "", + "protein_md5": "354a65fd7743ec916ea2b186331682d9", + "protein_translation": "MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010219" + ], + [ + "gene_synonym", + "ECK3098" + ], + [ + "gene_synonym", + "EcoGene:EG12751" + ], + [ + "gene_synonym", + "GI:90111540" + ], + [ + "gene_synonym", + "GeneID:947618" + ], + [ + "gene_synonym", + "JW5517" + ], + [ + "gene_synonym", + "NP_417578.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42625" + ], + [ + "gene_synonym", + "b3107" + ], + [ + "gene_synonym", + "yhaL" + ] + ], + "dna_sequence": "ATGAGTAAAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAA", + "dna_sequence_length": 165, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3057", + "location": [ + [ + "NC_000913", + 3255043, + "+", + 165 + ] + ], + "md5": "559b6a8a7ef6dafff77fb9a97f5a913a", + "parent_gene": "", + "protein_md5": "97ee3b0adf2f0e29085f45bb89bc3b92", + "protein_translation": "MSKKLAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174100" + ], + [ + "gene_synonym", + "ECK3099" + ], + [ + "gene_synonym", + "EcoGene:EG12752" + ], + [ + "gene_synonym", + "GI:49176312" + ], + [ + "gene_synonym", + "GeneID:2847723" + ], + [ + "gene_synonym", + "JW5518" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42626" + ], + [ + "gene_synonym", + "YP_026202.1" + ], + [ + "gene_synonym", + "b4470" + ], + [ + "gene_synonym", + "yhaM" + ], + [ + "gene_synonym", + "yhaN" + ] + ], + "dna_sequence": "ATGTTTGATTCGACTTTAAATCCGTTATGGCAGCGTTACATCCTCGCCGTTCAGGAGGAAGTAAAACCGGCGCTGGGATGTACTGAACCGATTTCACTGGCGCTGGCGGCGGCGGTTGCTGCGGCAGAACTGGAAGGTCCGGTTGAACGTGTAGAAGCCTGGGTTTCGCCAAATCTGATGAAGAACGGTCTGGGCGTCACCGTTCCCGGCACGGGAATGGTGGGGCTGCCGATTGCGGCGGCGCTGGGGGCGTTAGGTGGAAATGCCAACGCCGGGCTGGAAGTGCTGAAAGACGCAACAGCGCAGGCAATTGCCGATGCCAAAGCACTGCTGGCGGCGGGGAAAGTCTCCGTTAAGATCCAGGAACCTTGCGATGAAATCCTCTTCTCACGCGCCAAAGTCTGGAACGGTGAGAAGTGGGCGTGTGTCACCATCGTCGGCGGGCATACCAACATTGTGCATATCGAGACGCACGATGGTGTGGTGTTTACCCAGCAGGCGTGTGTGGCAGAGGGCGAGCAAGAGTCTCCGCTGACGGTGCTTTCCAGAACGACGCTGGCTGAGATCCTGAAGTTCGTCAATGAAGTCCCGTTTGCGGCGATCCGCTTTATTCTCGATTCCGCGAAGCTAAATTGTGCGTTATCGCAGGAAGGTTTGAGCGGTAAGTGGGGGCTGCATATTGGCGCGACGCTGGAAAAACAGTGCGAGCGCGGTTTGCTGGCGAAAGATCTCTCTTCATCCATTGTGATTCGTACCAGCGCGGCATCCGATGCGCGTATGGGCGGCGCTACGCTTCCGGCTATGAGTAACTCCGGCTCGGGTAACCAGGGGATTACCGCAACAATGCCTGTGGTGGTGGTAGCAGAACACTTCGGAGCGGATGATGAACGGCTGGCGCGTGCGCTGATGCTTTCGCATTTGAGCGCAATTTACATCCATAACCAGTTACCGCGTTTGTCTGCGCTGTGTGCCGCAACGACCGCAGCAATGGGGGCCGCCGCCGGGATGGCATGGCTGGTGGATGGGCGTTATGAAACCATCTCGATGGCGATCAGCAGTATGATCGGCGATGTCAGCGGCATGATTTGCGATGGTGCGTCGAACAGCTGCGCGATGAAGGTTTCGACCAGTGCTTCGGCTGCGTGGAAAGCGGTGTTAATGGCGCTGGATGATACCGCCGTGACCGGCAATGAAGGGATTGTGGCGCATGATGTTGAGCAGTCGATTGCCAACCTGTGTGCGTTAGCAAGCCATTCGATGCAGCAAACGGATCGGCAGATTATCGAGATTATGGCGAGCAAGGCCAGATAA", + "dna_sequence_length": 1311, + "functions": [ + "putative L-serine dehydratase alpha chain" + ], + "id": "CDS_3058", + "location": [ + [ + "NC_000913", + 3256651, + "-", + 1311 + ] + ], + "md5": "e10b9acafb77f2e8b22cc9c38e0a6e4e", + "parent_gene": "", + "protein_md5": "d2c3a295c16faf3cb069b40d540c0c00", + "protein_translation": "MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCDEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHDGVVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR", + "protein_translation_length": 436, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010228" + ], + [ + "gene_synonym", + "ECK3100" + ], + [ + "gene_synonym", + "EcoGene:EG12754" + ], + [ + "gene_synonym", + "GI:145698312" + ], + [ + "gene_synonym", + "GeneID:947628" + ], + [ + "gene_synonym", + "JW5519" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42628" + ], + [ + "gene_synonym", + "YP_026203.3" + ], + [ + "gene_synonym", + "b3110" + ], + [ + "gene_synonym", + "yhaO" + ] + ], + "dna_sequence": "ATGGAAATTGCATCGAATAAAGGCGTCATTGCAGACGCTTCGACCCCGGCGGGTCGTGCTGGAATGAGTGAGAGCGAGTGGCGAGAAGCGATCAAATTCGACAGTACTGACACCGGCTGGGTGATTATGAGTATCGGGATGGCGATTGGCGCGGGGATTGTTTTTCTCCCGGTGCAGGTCGGTTTGATGGGATTGTGGGTATTTTTGCTCTCATCGGTGATTGGTTACCCGGCAATGTATCTGTTTCAGCGATTGTTTATTAATACGCTGGCAGAATCACCAGAATGTAAAGATTACCCGAGCGTCATTAGCGGTTATTTAGGTAAAAACTGGGGCATCCTGTTAGGTGCGCTCTATTTCGTAATGCTGGTGATTTGGATGTTCGTCTATTCCACCGCCATCACCAACGATAGTGCTTCCTACCTGCATACCTTCGGCGTGACGGAAGGGTTGCTGTCAGACAGTCCCTTTTATGGTCTGGTACTGATTTGCATTCTGGTGGCGATCTCCTCACGCGGCGAGAAATTGTTATTCAAAATTTCGACCGGCATGGTGCTGACCAAGCTGCTGGTGGTCGCGGCGCTGGGCGTGTCGATGGTGGGAATGTGGCATCTGTATAACGTCGGTTCGCTACCGCCGCTGGGGCTGCTGGTGAAAAACGCCATTATTACGCTGCCGTTTACCCTGACGTCGATTCTGTTTATCCAGACGTTAAGTCCGATGGTGATCTCTTATCGCTCGCGGGAAAAATCAATTGAAGTGGCGCGGCATAAAGCATTGCGGGCAATGAATATCGCGTTTGGCATTTTGTTTGTCACCGTCTTTTTCTACGCCGTGTCGTTCACGCTGGCGATGGGACATGACGAAGCGGTAAAAGCCTATGAGCAGAATATTTCCGCGCTGGCGATTGCCGCACAGTTTATTAGCGGTGACGGCGCAGCGTGGGTGAAAGTGGTCAGCGTCATTCTCAATATCTTTGCTGTCATGACTGCATTCTTTGGCGTCTATTTAGGCTTTCGCGAAGCAACGCAAGGGATCGTAATGAACATCCTGCGTCGCAAGATGCCTGCCGAGAAGATTAACGAAAATCTCGTTCAGCGCGGCATCATGATTTTCGCCATTTTGCTGGCCTGGAGCGCCATCGTACTGAACGCACCGGTGTTGAGCTTCACCTCTATCTGTAGCCCGATTTTCGGCATGGTAGGGTGCCTGATCCCGGCGTGGCTGGTTTACAAAGTACCAGCATTGCACAAATACAAAGGGATGTCTCTGTACCTGATTATCGTCACTGGTTTGTTGCTGTGTGTTTCTCCGTTCCTGGCATTTTCTTGA", + "dna_sequence_length": 1332, + "functions": [ + "putative transporter" + ], + "id": "CDS_3059", + "location": [ + [ + "NC_000913", + 3258010, + "-", + 1332 + ] + ], + "md5": "bb728211de7adf600f369e77a6ba779a", + "parent_gene": "", + "protein_md5": "a33e6b3bc0e4babe7abbd6b9d416d229", + "protein_translation": "MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174101" + ], + [ + "gene_synonym", + "ECK3101" + ], + [ + "gene_synonym", + "EcoGene:EG12756" + ], + [ + "gene_synonym", + "GI:49176314" + ], + [ + "gene_synonym", + "GeneID:2847724" + ], + [ + "gene_synonym", + "JW5520" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42630" + ], + [ + "gene_synonym", + "YP_026204.1" + ], + [ + "gene_synonym", + "b4471" + ], + [ + "gene_synonym", + "tdcG" + ], + [ + "gene_synonym", + "yhaP" + ], + [ + "gene_synonym", + "yhaQ" + ] + ], + "dna_sequence": "ATGATTAGTGCATTCGATATTTTCAAAATTGGGATTGGTCCCTCCAGTTCGCATACCGTGGGGCCAATGAATGCCGGAAAAAGTTTTATTGATCGGCTGGAAAGTAGCGGCTTATTAACCGCGACGAGCCATATTGTGGTCGATCTGTACGGGTCGTTGTCACTGACGGGCAAAGGCCATGCCACGGATGTCGCCATCATCATGGGACTGGCAGGAAACAGTCCGCAGGATGTTGTCATTGATGAGATCCCTGCATTTATAGAGTTAGTAACGCGCAGCGGGCGGCTGCCAGTGGCATCTGGTGCGCATATTGTTGATTTTCCTGTAGCAAAGAACATTATCTTCCATCCCGAAATGTTGCCTCGCCATGAGAACGGAATGCGGATCACTGCCTGGAAGGGACAGGAAGAGCTATTAAGTAAAACCTATTACTCTGTCGGCGGCGGGTTTATTGTCGAAGAAGAACACTTCGGCCTGTCGCACGATGTCGAAACGTCCGTACCTTACGATTTCCACTCAGCAGGTGAACTGCTGAAAATGTGTGATTACAACGGCCTGTCTATATCTGGTCTGATGATGCACAACGAGCTAGCGCTGCGCAGCAAAGCGGAAATTGACGCCGGTTTTGCCCGTATCTGGCAAGTGATGCATGACGGTATTGAACGTGGGATGAACACTGAAGGCGTGCTGCCTGGTCCGCTCAATGTGCCGCGCCGTGCCGTAGCGCTGCGTCGTCAGCTGGTTTCCAGCGATAACATCTCTAACGATCCGATGAATGTCATCGACTGGATCAACATGTACGCGCTGGCGGTTAGTGAAGAAAACGCAGCTGGCGGGCGCGTGGTAACGGCACCGACTAACGGTGCGTGCGGCATTATTCCGGCAGTACTGGCTTATTACGATAAGTTCCGTCGTCCGGTAAACGAGCGGTCAATTGCCCGCTATTTTCTGGCCGCGGGGGCTATTGGCGCGCTGTATAAAATGAACGCCTCCATCTCTGGCGCGGAAGTCGGCTGTCAGGGGGAGATTGGCGTGGCCTGTTCAATGGCGGCGGCAGGGTTAACTGAACTACTGGGCGGCAGTCCGGCGCAGGTATGCAATGCGGCGGAAATCGCGATGGAGCATAACCTTGGGCTGACCTGCGATCCGGTTGCCGGACAGGTACAAATCCCGTGCATTGAACGTAATGCCATTAATGCCGTGAAAGCAGTAAACGCCGCGCGGATGGCGATGCGCCGCACCTCGGCACCGCGTGTTTCACTCGATAAAGTGATCGAGACGATGTATGAAACCGGCAAAGATATGAACGATAAATACCGCGAAACATCACGCGGAGGACTGGCCATTAAAGTGGTCTGCGGCTGA", + "dna_sequence_length": 1365, + "functions": [ + "L-serine dehydratase 3, anaerobic" + ], + "id": "CDS_3060", + "location": [ + [ + "NC_000913", + 3259649, + "-", + 1365 + ] + ], + "md5": "2bc7c5edde47841258f29620937121ba", + "parent_gene": "", + "protein_md5": "ad3dcde116d7f4700f753f2ada40f229", + "protein_translation": "MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010240" + ], + [ + "gene_synonym", + "ECK3102" + ], + [ + "gene_synonym", + "EcoGene:EG12757" + ], + [ + "gene_synonym", + "GI:90111542" + ], + [ + "gene_synonym", + "GeneID:947624" + ], + [ + "gene_synonym", + "JW5521" + ], + [ + "gene_synonym", + "NP_417583.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGL2" + ], + [ + "gene_synonym", + "b3113" + ], + [ + "gene_synonym", + "tdcF" + ], + [ + "gene_synonym", + "yhaR" + ] + ], + "dna_sequence": "ATGAAAAAGATTATCGAAACGCAACGTGCCCCAGGCGCAATCGGCCCTTATGTTCAGGGCGTTGATTTAGGCAGCATGGTCTTCACCTCCGGGCAAATACCGGTTTGCCCACAGACCGGTGAGATCCCGGCTGATGTGCAAGATCAGGCGCGTTTAAGCCTCGAAAACGTCAAAGCGATCGTGGTTGCTGCCGGGCTGAGCGTGGGCGATATCATCAAGATGACCGTGTTTATCACCGATCTGAATGATTTTGCCACCATCAACGAAGTCTATAAGCAGTTCTTCGATGAGCATCAGGCGACCTATCCGACCCGGAGCTGTGTGCAGGTCGCGCGTTTGCCGAAAGATGTGAAGCTGGAAATTGAAGCCATCGCAGTACGTAGTGCGTAA", + "dna_sequence_length": 390, + "functions": [ + "putative reactive intermediate deaminase" + ], + "id": "CDS_3061", + "location": [ + [ + "NC_000913", + 3260110, + "-", + 390 + ] + ], + "md5": "93c83ad1545ab3ccbedff787eef8c2c1", + "parent_gene": "", + "protein_md5": "806d23732eecf3a07d4a5478b9c46f34", + "protein_translation": "MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010242" + ], + [ + "gene_synonym", + "ECK3103" + ], + [ + "gene_synonym", + "EcoGene:EG12758" + ], + [ + "gene_synonym", + "GI:49176316" + ], + [ + "gene_synonym", + "GeneID:947623" + ], + [ + "gene_synonym", + "JW5522" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42632" + ], + [ + "gene_synonym", + "YP_026205.1" + ], + [ + "gene_synonym", + "b3114" + ], + [ + "gene_synonym", + "tdcE" + ], + [ + "gene_synonym", + "yhaS" + ] + ], + "dna_sequence": "ATGAAGGTAGATATTGATACCAGCGATAAGCTGTACGCCGACGCATGGCTTGGCTTTAAAGGTACGGACTGGAAAAACGAAATTAATGTCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACCAATATTGCCACCACAATTACCGCTCATGATGCGGGATATATTAACCAGCCGCTGGAAAAAATTGTTGGCCTGCAAACGGATGCGCCGTTGAAACGTGCGCTACACCCGTTCGGTGGCATTAATATGATTAAAAGTTCATTCCACGCCTATGGCCGAGAAATGGACAGTGAATTTGAATATCTGTTTACCGATCTGCGTAAAACCCATAACCAGGGCGTATTTGATGTTTACTCACCGGATATGCTGCGCTGCCGTAAATCTGGCGTGCTGACCGGTTTACCAGATGGCTATGGCCGTGGGCGCATTATCGGTGACTATCGCCGCGTAGCGCTGTATGGCATCAGTTATCTGGTACGTGAACGCGAACTGCAATTTGCCGATCTCCAGTCTCGTCTGGAAAAAGGCGAGGATCTGGAAGCCACCATCCGTCTGCGTGAGGAGCTGGCAGAGCATCGTCATGCGCTGTTGCAGATTCAGGAAATGGCGGCGAAATATGGCTTTGATATCTCTCGCCCGGCGCAGAATGCGCAGGAAGCGGTGCAGTGGCTCTACTTCGCTTATCTGGCGGCAGTGAAATCGCAAAATGGCGGCGCGATGTCGCTGGGCCGCACGGCATCGTTCCTCGATATCTACATTGAGCGCGACTTTAAAGCTGGCGTACTCAATGAGCAGCAGGCACAGGAACTGATCGATCACTTCATCATGAAGATCCGTATGGTACGCTTCCTGCGTACACCGGAATTTGATTCGCTGTTCTCCGGCGACCCAATCTGGGCGACGGAAGTGATCGGCGGGATGGGGCTGGACGGTCGTACGCTGGTGACCAAAAACTCCTTCCGCTATTTGCACACCCTGCACACTATGGGGCCGGCACCGGAACCTAACCTGACCATTCTTTGGTCGGAAGAATTACCGATTGCCTTCAAAAAATATGCCGCGCAGGTGTCGATCGTCACCTCTTCCTTGCAGTATGAAAATGACGATCTGATGCGTACTGACTTCAACAGCGACGATTACGCGATTGCCTGCTGCGTCAGCCCAATGGTGATTGGTAAGCAAATGCAGTTCTTTGGTGCACGCGCTAACCTGGCGAAAACGCTGCTCTACGCAATTAACGGCGGGGTGGACGAGAAGCTGAAGATTCAGGTCGGGCCGAAAACAGCACCGCTGATGGACGACGTGCTGGATTACGACAAAGTGATGGACAGCCTCGATCACTTCATGGACTGGCTGGCGGTGCAGTACATCAGCGCGCTGAATATCATTCACTACATGCACGACAAGTACAGCTACGAAGCTTCGCTGATGGCGCTGCACGATCGTGATGTCTATCGCACTATGGCATGCGGCATCGCGGGCCTGTCGGTGGCGACGGACTCCCTGTCTGCCATCAAATATGCCCGCGTGAAACCAATCCGTGACGAAAACGGCCTGGCGGTGGACTTTGAAATCGACGGTGAATATCCGCAGTACGGCAACAACGACGAGCGCGTAGACAGCATTGCCTGCGACCTGGTTGAACGCTTTATGAAGAAAATTAAAGCGCTGCCAACCTATCGCAACGCCGTCCCTACCCAGTCGATTCTGACTATCACTTCTAACGTGGTGTACGGCCAGAAAACCGGTAATACGCCGGACGGTCGTCGCGCCGGAACACCGTTCGCGCCGGGCGCTAACCCGATGCATGGTCGTGACCGCAAAGGTGCCGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCACGAAGCGGATGTCGAAGGCGGTCAACACCTCAACGTCAACGTAATGAATCGGGAAATGCTGCTGGATGCCATCGAGCACCCGGAAAAATATCCTAACCTGACAATCCGTGTCTCTGGCTACGCCGTGCGCTTCAACGCACTGACCCGTGAACAGCAACAGGATGTTATTTCACGTACCTTTACCCAGGCGCTCTGA", + "dna_sequence_length": 2295, + "functions": [ + "pyruvate formate-lyase 4/2-ketobutyrate formate-lyase" + ], + "id": "CDS_3062", + "location": [ + [ + "NC_000913", + 3262418, + "-", + 2295 + ] + ], + "md5": "3465fcb2a7f97ae8fd45f151796f302e", + "parent_gene": "", + "protein_md5": "24875adb4d2550b6da24948f620f7f72", + "protein_translation": "MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL", + "protein_translation_length": 764, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010245" + ], + [ + "gene_synonym", + "ECK3104" + ], + [ + "gene_synonym", + "EcoGene:EG11172" + ], + [ + "gene_synonym", + "GI:145698313" + ], + [ + "gene_synonym", + "GeneID:947635" + ], + [ + "gene_synonym", + "JW5806" + ], + [ + "gene_synonym", + "NP_417585.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11868" + ], + [ + "gene_synonym", + "b3115" + ], + [ + "gene_synonym", + "tdcD" + ], + [ + "gene_synonym", + "yhaA" + ] + ], + "dna_sequence": "ATGAATGAATTTCCGGTTGTTTTGGTTATTAACTGTGGTTCGTCTTCGATTAAGTTTTCCGTGCTCGATGCCAGCGACTGTGAAGTATTAATGTCAGGTATTGCCGACGGTATTAACTCGGAAAATGCATTCTTATCCGTAAATGGGGGAGAGCCAGCACCGCTGGCTCACCACAGCTACGAAGGTGCATTGAAGGCAATTGCATTTGAACTGGAAAAACGGAATTTAAATGACAGTGTGGCCTTAATTGGCCACCGCATCGCTCACGGCGGCAGTATTTTTACCGAGTCCGCCATTATTACCGATGAAGTCATTGATAATATCCGTCGCGTTTCTCCACTGGCACCCCTGCATAATTACGCCAATTTAAGTGGTATTGAATCGGCGCAGCAATTATTTCCGGGCGTAACTCAGGTGGCGGTATTTGATACCAGTTTCCACCAGACGATGGCTCCGGAAGCTTATTTATACGGCCTGCCGTGGAAATATTATGAAGAGTTAGGTGTACGCCGTTATGGTTTCCACGGCACGTCGCACCGCTATGTTTCCCAGCGCGCACATTCGCTGCTGAATCTGGCGGAAGATGACTCCGGCCTGGTTGTGGCGCATCTTGGCAATGGCGCGTCAATCTGCGCGGTTCGCAACGGTCAGAGTGTTGATACCTCAATGGGAATGACGCCGCTGGAAGGCTTGATGATGGGTACCCGCAGTGGCGATGTCGACTTTGGTGCGATGTCCTGGGTCGCCAGCCAAACCAACCAGAGCCTGGGTGACCTGGAACGCGTAGTGAATAAAGAGTCGGGATTATTAGGTATTTCCGGTCTTTCTTCGGATTTACGTGTTCTGGAAAAAGCCTGGCATGAAGGTCACGAACGCGCGCAACTGGCAATTAAAACCTTTGTTCACCGAATTGCCCGTCATATTGCCGGACACGCAGCTTCATTACGTCGCCTGGATGGAATTATATTCACCGGCGGAATAGGAGAGAATTCAAGCTTAATTCGTCGTCTGGTCATGGAACATTTGGCTGTATTAGGCTTAGAGATTGATACAGAAATGAATAATCGCTCTAACTCCTGTGGTGAGCGAATTGTTTCCAGTGAAAATGCGCGTGTCATTTGTGCCGTTATTCCGACTAACGAAGAAAAAATGATTGCTTTGGATGCCATTCATTTAGGCAAAGTTAACGCGCCCGCAGAATTTGCATAA", + "dna_sequence_length": 1209, + "functions": [ + "propionate kinase/acetate kinase C, anaerobic" + ], + "id": "CDS_3063", + "location": [ + [ + "NC_000913", + 3263660, + "-", + 1209 + ] + ], + "md5": "3b6195b508586bb8f334a77c0986329b", + "parent_gene": "", + "protein_md5": "d962ca2e62e2633b629c9e0722a22b09", + "protein_translation": "MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGLEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010247" + ], + [ + "gene_synonym", + "ECK3105" + ], + [ + "gene_synonym", + "EcoGene:EG10991" + ], + [ + "gene_synonym", + "GI:16131009" + ], + [ + "gene_synonym", + "GeneID:947629" + ], + [ + "gene_synonym", + "JW3087" + ], + [ + "gene_synonym", + "NP_417586.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAD8" + ], + [ + "gene_synonym", + "b3116" + ], + [ + "gene_synonym", + "tdcC" + ] + ], + "dna_sequence": "ATGAGTACTTCAGATAGCATTGTATCCAGCCAGACAAAACAATCGTCCTGGCGTAAATCAGATACCACATGGACGTTAGGCTTGTTTGGTACGGCAATCGGCGCCGGGGTGCTGTTCTTCCCTATCCGCGCAGGTTTTGGCGGACTGATCCCGATTCTTCTGATGTTGGTATTGGCATACCCCATCGCGTTTTATTGCCACCGGGCGCTGGCGCGTCTGTGTCTTTCTGGCTCTAACCCTTCCGGCAACATTACGGAAACGGTGGAAGAGCATTTTGGTAAAACTGGCGGCGTGGTTATCACGTTCCTGTACTTCTTCGCGATTTGCCCACTGCTGTGGATTTATGGCGTTACTATTACCAATACCTTTATGACGTTCTGGGAAAACCAGCTCGGCTTTGCACCGCTGAATCGCGGCTTTGTGGCGCTGTTCCTGTTGCTGCTGATGGCTTTCGTCATCTGGTTTGGTAAGGATCTGATGGTTAAAGTGATGAGCTACCTGGTATGGCCGTTTATCGCCAGCCTGGTGCTGATTTCTTTGTCGCTGATCCCTTACTGGAACTCTGCAGTTATCGACCAGGTTGACCTCGGTTCGCTGTCGTTAACCGGTCATGACGGTATCCTGATCACTGTCTGGCTGGGGATTTCCATCATGGTTTTCTCCTTTAACTTCTCGCCAATCGTCTCTTCCTTCGTGGTTTCTAAGCGTGAAGAGTATGAGAAAGACTTCGGTCGCGACTTCACCGAACGTAAATGTTCCCAAATCATTTCTCGTGCCAGCATGCTGATGGTTGCAGTGGTGATGTTCTTTGCCTTTAGCTGCCTGTTTACTCTGTCTCCGGCCAACATGGCGGAAGCCAAAGCGCAGAATATTCCAGTGCTTTCTTATCTGGCTAACCACTTTGCGTCCATGACCGGTACCAAAACAACGTTCGCGATTACACTGGAATATGCGGCTTCCATCATCGCACTCGTGGCTATCTTCAAATCTTTCTTCGGTCACTATCTGGGAACGCTGGAAGGTCTGAATGGCCTGGTCCTGAAGTTTGGTTATAAAGGCGACAAAACTAAAGTGTCGCTGGGTAAACTGAACACTATCAGCATGATCTTCATCATGGGCTCCACCTGGGTTGTTGCCTACGCCAACCCGAACATCCTTGACCTGATTGAAGCCATGGGCGCACCGATTATCGCATCCCTGCTGTGCCTGTTGCCGATGTATGCCATCCGTAAAGCGCCGTCTCTGGCGAAATACCGTGGTCGTCTGGATAACGTGTTTGTTACCGTGATTGGTCTGCTGACCATCCTGAACATCGTATACAAACTGTTTTAA", + "dna_sequence_length": 1332, + "functions": [ + "L-threonine/L-serine transporter" + ], + "id": "CDS_3064", + "location": [ + [ + "NC_000913", + 3265017, + "-", + 1332 + ] + ], + "md5": "6355f89856db38701385e44ca2bc4156", + "parent_gene": "", + "protein_md5": "a330b1b5749d3a06929053f127e08624", + "protein_translation": "MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010249" + ], + [ + "gene_synonym", + "ECK3106" + ], + [ + "gene_synonym", + "EcoGene:EG10990" + ], + [ + "gene_synonym", + "GI:16131010" + ], + [ + "gene_synonym", + "GeneID:947633" + ], + [ + "gene_synonym", + "JW3088" + ], + [ + "gene_synonym", + "NP_417587.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGF6" + ], + [ + "gene_synonym", + "b3117" + ], + [ + "gene_synonym", + "tdcB" + ] + ], + "dna_sequence": "ATGCATATTACATACGATCTGCCGGTTGCTATTGATGACATTATTGAAGCGAAACAACGACTGGCTGGGCGAATTTATAAAACAGGCATGCCTCGCTCCAACTATTTTAGTGAACGTTGCAAAGGTGAAATATTCCTGAAGTTTGAAAATATGCAGCGTACGGGTTCATTTAAAATTCGTGGCGCATTTAATAAATTAAGTTCACTGACCGATGCGGAAAAACGCAAAGGCGTGGTGGCCTGTTCTGCGGGCAACCATGCGCAAGGGGTTTCCCTCTCCTGCGCGATGCTGGGTATCGACGGTAAAGTGGTGATGCCAAAAGGTGCGCCAAAATCCAAAGTAGCGGCAACGTGCGACTACTCCGCAGAAGTCGTTCTGCATGGTGATAACTTCAACGACACTATCGCTAAAGTGAGCGAAATTGTCGAAATGGAAGGCCGTATTTTTATCCCACCTTACGATGATCCGAAAGTGATTGCTGGCCAGGGAACGATTGGTCTGGAAATTATGGAAGATCTCTATGATGTCGATAACGTGATTGTGCCAATTGGTGGTGGCGGTTTAATTGCTGGTATTGCGGTGGCAATTAAATCTATTAACCCGACCATTCGTGTTATTGGCGTACAGTCTGAAAACGTTCACGGCATGGCGGCTTCTTTCCACTCCGGAGAAATAACCACGCACCGAACTACCGGCACCCTGGCGGATGGTTGTGATGTCTCCCGCCCGGGTAATTTAACTTACGAAATCGTTCGTGAATTAGTCGATGACATCGTGCTGGTCAGCGAAGACGAAATCAGAAACAGTATGATTGCCTTAATTCAGCGCAATAAAGTCGTCACCGAAGGCGCAGGCGCTCTGGCATGTGCTGCATTATTAAGCGGTAAATTAGACCAATATATTCAAAACAGAAAAACCGTCAGTATTATTTCCGGCGGCAATATCGATCTTTCTCGCGTCTCTCAAATCACCGGTTTCGTTGACGCTTAA", + "dna_sequence_length": 990, + "functions": [ + "L-threonine dehydratase, catabolic" + ], + "id": "CDS_3065", + "location": [ + [ + "NC_000913", + 3266028, + "-", + 990 + ] + ], + "md5": "01f209a409357d17f9ef64a82ac0e6aa", + "parent_gene": "", + "protein_md5": "994df575ca9a00e2f723808a842887e5", + "protein_translation": "MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010252" + ], + [ + "gene_synonym", + "ECK3107" + ], + [ + "gene_synonym", + "EcoGene:EG10989" + ], + [ + "gene_synonym", + "GI:16131011" + ], + [ + "gene_synonym", + "GeneID:947494" + ], + [ + "gene_synonym", + "JW3089" + ], + [ + "gene_synonym", + "NP_417588.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACQ7" + ], + [ + "gene_synonym", + "b3118" + ], + [ + "gene_synonym", + "tdcA" + ] + ], + "dna_sequence": "ATGAGCACTATTCTTCTTCCGAAAACGCAGCACCTGGTAGTCTTTCAGGAAGTCATTAGAAGTGGTTCTATCGGCTCGGCTGCAAAAGAATTAGGGTTAACTCAACCGGCCGTCAGTAAAATCATTAACGATATTGAAGATTATTTTGGTGTGGAATTAGTGGTGCGGAAAAATACCGGTGTAACATTAACACCTGCCGGTCAATTGTTACTCTCCCGTTCCGAATCCATTACCCGTGAAATGAAAAATATGGTTAATGAGATAAGCGGTATGTCTTCTGAGGCGGTGGTGGAAGTCTCATTTGGTTTTCCTTCATTGATTGGTTTTACTTTTATGTCAGGGATGATCAACAAGTTCAAAGAGGTGTTCCCGAAAGCGCAGGTTTCTATGTATGAAGCGCAACTGTCTTCGTTCTTACCGGCAATCCGCGACGGTCGACTGGATTTTGCGATTGGTACGTTAAGTGCAGAAATGAAGCTTCAGGATTTACATGTTGAGCCGCTGTTCGAGTCCGAGTTTGTGCTGGTAGCCAGTAAGTCCCGAACATGCACCGGCACCACCACGCTGGAGTCGTTGAAGAACGAACAGTGGGTGTTGCCACAAACTAATATGGGGTACTACAGCGAACTGCTTACTACGTTACAAAGAAATGGCATCAGTATTGAAAACATCGTTAAAACCGACTCAGTCGTGACAATTTATAATCTTGTTCTCAATGCTGATTTCTTAACTGTAATTCCTTGTGATATGACGTCACCTTTTGGTTCTAATCAATTTATTACTATTCCGGTTGAAGAAACATTACCTGTGGCACAATATGCCGCGGTATGGTCGAAAAATTATCGTATTAAAAAAGCAGCATCGGTTTTGGTGGAATTAGCCAAAGAGTATTCATCTTATAATGGGTGTAGACGAAGGCAATTAATAGAAGTTGGTTAG", + "dna_sequence_length": 939, + "functions": [ + "tdc operon transcriptional activator" + ], + "id": "CDS_3066", + "location": [ + [ + "NC_000913", + 3267065, + "-", + 939 + ] + ], + "md5": "9e61b8a359d086fde4511305804ee2b0", + "parent_gene": "", + "protein_md5": "1a6ccd40122dc3fb213c88d147319706", + "protein_translation": "MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010255" + ], + [ + "gene_synonym", + "ECK3108" + ], + [ + "gene_synonym", + "EcoGene:EG10992" + ], + [ + "gene_synonym", + "GI:162135908" + ], + [ + "gene_synonym", + "GeneID:944907" + ], + [ + "gene_synonym", + "JW5525" + ], + [ + "gene_synonym", + "NP_417589.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11866" + ], + [ + "gene_synonym", + "b3119" + ], + [ + "gene_synonym", + "tdcR" + ] + ], + "dna_sequence": "ATGAGCAAGTTCTCAAATTTTATTATAAATAAACCATTTTCAGTGATAAATAATGCGGCATGTCACATTTTTTCACGCTATTTGTTGGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAA", + "dna_sequence_length": 219, + "functions": [ + "L-threonine dehydratase operon activator protein" + ], + "id": "CDS_3067", + "location": [ + [ + "NC_000913", + 3267380, + "+", + 219 + ] + ], + "md5": "0d16ffeac2773569f0dbbaae402f5b33", + "parent_gene": "", + "protein_md5": "63b248a800619c52826c0f4d9ea830e3", + "protein_translation": "MSKFSNFIINKPFSVINNAACHIFSRYLLENKHLFYQYFKISNTCIDHLEQLINVNFFSSDRTSFCECNRFP", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010261" + ], + [ + "gene_synonym", + "ECK3109" + ], + [ + "gene_synonym", + "EcoGene:EG11173" + ], + [ + "gene_synonym", + "GI:90111544" + ], + [ + "gene_synonym", + "GeneID:947705" + ], + [ + "gene_synonym", + "JW3091" + ], + [ + "gene_synonym", + "NP_417590.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11865" + ], + [ + "gene_synonym", + "b3120" + ], + [ + "gene_synonym", + "yhaB" + ] + ], + "dna_sequence": "ATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCAATCCCGCCAATGCACGCAGTGGTTAACAATCACAATAGAAATATTGATTATTGGACGGTAAAAAGAAAGTTTGCAGAAATTGTCTCCACCAATGACGTTAATAAAATTTACAGTATAAGTAATGAACTGCGGAGAGTATTATCTGCAATAACTGCATTGAATTTCTATCATGGCGATGTTCCTTCTGTCATGATCCGAATCCAACCGGAAAATATGAGTCCATTCATTATAGATATTTCTACAGGAGAACATGATGATTATATCATACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGA", + "dna_sequence_length": 540, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3068", + "location": [ + [ + "NC_000913", + 3267854, + "+", + 540 + ] + ], + "md5": "3adf1003c46653fe307dbe0f381c4744", + "parent_gene": "", + "protein_md5": "1bd6f061a4480e50acdf6f79fcdf1b5d", + "protein_translation": "MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010263" + ], + [ + "gene_synonym", + "ECK3110" + ], + [ + "gene_synonym", + "EcoGene:EG11174" + ], + [ + "gene_synonym", + "GI:16131014" + ], + [ + "gene_synonym", + "GeneID:947557" + ], + [ + "gene_synonym", + "JW3092" + ], + [ + "gene_synonym", + "NP_417591.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11864" + ], + [ + "gene_synonym", + "b3121" + ], + [ + "gene_synonym", + "yhaC" + ] + ], + "dna_sequence": "ATGTTCCCTGTTTCATCAATTGGTAATGATATTAGTAGTGATTTAGTCCGTCGAAAAATGAATGACCTTCCTGAAAGCCCAACAGGAAATAACCTCGAAGCACTAGCACCAGGTATAGAAAAACTAAAACAGACCTCTATTGAAATGGTCACTTTACTTAACACGTTACAACCTGGTGGAAAATGCATTATCACTGGTGATTTTCAAAAAGAATTAGCGTACTTACAAAATGTAATTCTTTATAATGTCTCGTCTCTTCGTCTGGATTTTTTAGGTTATAACGCCCAAATTATTCAACGATCGGACAATACTTGTGAACTTACCATTAATGAACCGTTAAAAAACCAGGAAATATCCACAGGTAATATCAATATTAATTGCCCATTAAAAGATATTTACAATGAAATCAGGAGGTTAAACGTAATTTTTAGTTGTGGGACTGGAGATATCGTTGATCTATCCTCTCTGGACTTACGTAATGTCGATTTAGATTATTATGATTTCACAGATAAACATATGGCTAATACTATTTTAAATCCTTTTAAATTGAATTCAACAAATTTTACTAATGCCAACATGTTTCAGGTTAATTTTGTTAGTTCAACACAAAACGCCACAATCTCCTGGGATTATTTACTAAAAATAACGCCTGTTTTAATAAGCATTAGCGATATGTATTCTGAAGAAAAAATCAAGTTTGTCGAAAGTTGTTTAAATGAGCCTGGAGACATTACCGAAGAACAATTAAAAATTATGAGATTTGCAATTATAAAATCTATACCAAGGGCAACTCTTACAGATAAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGAAGCATATAACTCAGAGAAGCAATATTTTACCAGAGAGGACTATACGTATGATTACGACCTTTTAAATGCAATATAG", + "dna_sequence_length": 1188, + "functions": [ + "pentapetide repeats-related protein" + ], + "id": "CDS_3069", + "location": [ + [ + "NC_000913", + 3268415, + "+", + 1188 + ] + ], + "md5": "bcb291b8619709b124ae5f2fc9638c37", + "parent_gene": "", + "protein_md5": "2ef88107c6f256199a64c83629f3e781", + "protein_translation": "MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI", + "protein_translation_length": 395, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010271" + ], + [ + "gene_synonym", + "ECK3112" + ], + [ + "gene_synonym", + "EcoGene:EG11175" + ], + [ + "gene_synonym", + "GI:145698314" + ], + [ + "gene_synonym", + "GeneID:947632" + ], + [ + "gene_synonym", + "JW3093" + ], + [ + "gene_synonym", + "NP_417593.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23524" + ], + [ + "gene_synonym", + "b3124" + ], + [ + "gene_synonym", + "garK" + ], + [ + "gene_synonym", + "yhaD" + ] + ], + "dna_sequence": "ATGAAAATCGTAATCGCCCCAGACTCTTATAAAGAAAGTTTATCTGCCAGCGAGGTTGCGCAGGCGATAGAAAAAGGATTTCGGGAAATTTTTCCTGATGCACAGTACGTTTCTGTTCCGGTTGCCGACGGTGGCGAAGGAACGGTGGAAGCGATGATTGCAGCCACCCAGGGGGCTGAACGTCACGCCTGGGTTACAGGGCCGCTGGGCGAGAAAGTGAATGCCAGTTGGGGGATCTCCGGCGATGGCAAAACCGCGTTTATTGAAATGGCGGCGGCCAGTGGGCTGGAGCTGGTACCTGCGGAAAAACGCGATCCACTCGTGACCACTTCACGCGGCACAGGCGAGTTAATCCTGCAGGCGCTGGAGAGCGGTGCGACAAACATTATTATCGGCATTGGCGGCAGCGCTACAAATGATGGCGGCGCAGGCATGGTACAGGCGCTGGGGGCGAAATTATGCGACGCCAACGGCAATGAAATTGGTTTTGGCGGCGGTAGTCTTAATACTCTGAATGATATTGATATTTCCGGCCTCGATCCGCGCTTAAAAGATTGCGTCATTCGCGTCGCTTGTGATGTCACCAATCCGCTGGTGGGCGATAACGGCGCATCGCGCATCTTTGGCCCACAAAAGGGAGCCAGTGAAGCGATGATTGTTGAGCTGGACAATAACCTCTCTCACTATGCCGAGGTCATTAAAAAAGCGCTGCATGTTGATGTGAAAGATGTCCCCGGTGCAGGAGCTGCGGGTGGTATGGGCGCGGCGCTAATGGCGTTTCTTGGTGCGGAACTGAAAAGTGGTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGATTGGCATTGCGGGTAGCCTGACCGATGATGTTGGCGTTGTACATCAGCATGGCATTGATGCGGTCTTCAGCGTATTGACCAGCATAGGTACGTTGGACGAAGCATTCCGCGGGGCTTATGACAATATCTGCCGTGCTTCACGTAATATCGCCGCGACACTGGCGATTGGAATGCGCAACGCGGGGTGA", + "dna_sequence_length": 1146, + "functions": [ + "glycerate kinase I" + ], + "id": "CDS_3070", + "location": [ + [ + "NC_000913", + 3271770, + "-", + 1146 + ] + ], + "md5": "165cf802398437dbbd60f3be4229be34", + "parent_gene": "", + "protein_md5": "de7a1fa4cd3bfc3bb4937718ed6cfe88", + "protein_translation": "MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGAERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAMIVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010273" + ], + [ + "gene_synonym", + "ECK3113" + ], + [ + "gene_synonym", + "EcoGene:EG11176" + ], + [ + "gene_synonym", + "GI:145698315" + ], + [ + "gene_synonym", + "GeneID:947631" + ], + [ + "gene_synonym", + "JW5526" + ], + [ + "gene_synonym", + "NP_417594.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABQ2" + ], + [ + "gene_synonym", + "b3125" + ], + [ + "gene_synonym", + "garR" + ], + [ + "gene_synonym", + "yhaE" + ] + ], + "dna_sequence": "ATGAAAGTTGGTTTTATTGGCCTGGGGATTATGGGTAAACCAATGAGTAAAAACCTTCTGAAAGCAGGTTACTCGCTGGTGGTTGCTGACCGTAACCCAGAAGCTATTGCTGACGTGATTGCTGCAGGTGCAGAAACAGCGTCTACGGCTAAAGCGATCGCTGAACAGTGCGACGTCATCATAACCATGCTGCCAAACTCCCCTCATGTGAAAGAGGTGGCGCTGGGTGAGAATGGCATTATTGAAGGCGCGAAGCCAGGTACGGTATTGATCGATATGAGTTCTATCGCACCGCTGGCAAGCCGTGAAATCAGCGAAGCGCTGAAAGCGAAAGGCATTGATATGCTGGATGCTCCGGTGAGCGGCGGTGAACCGAAAGCCATCGACGGTACGCTGTCAGTGATGGTGGGCGGCGACAAGGCTATTTTCGACAAATACTATGATTTGATGAAAGCGATGGCGGGTTCCGTGGTGCATACCGGGGAAATCGGTGCAGGTAACGTCACCAAACTGGCAAATCAGGTCATTGTGGCGCTGAATATTGCCGCGATGTCAGAAGCGTTAACGCTGGCAACTAAAGCGGGCGTTAACCCGGACCTGGTTTATCAGGCAATTCGCGGTGGACTGGCGGGCAGTACCGTGCTGGATGCCAAAGCGCCGATGGTGATGGACCGCAACTTCAAGCCGGGCTTCCGTATTGATCTGCATATTAAGGATCTGGCGAATGCGCTGGATACTTCTCACGGCGTCGGCGCACAACTGCCGCTCACAGCTGCGGTTATGGAGATGATGCAGGCACTGCGAGCAGATGGTTTAGGAACGGCGGATCATAGCGCCCTGGCGTGCTACTACGAAAAACTGGCGAAAGTCGAAGTTACTCGTTAA", + "dna_sequence_length": 885, + "functions": [ + "tartronate semialdehyde reductase" + ], + "id": "CDS_3071", + "location": [ + [ + "NC_000913", + 3272751, + "-", + 885 + ] + ], + "md5": "9575b72c63c643c71fe1c680c204fe3f", + "parent_gene": "", + "protein_md5": "328fc96a37dfb45d815016e902fc921c", + "protein_translation": "MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010276" + ], + [ + "gene_synonym", + "ECK3114" + ], + [ + "gene_synonym", + "EcoGene:EG10016" + ], + [ + "gene_synonym", + "GI:16131018" + ], + [ + "gene_synonym", + "GeneID:947630" + ], + [ + "gene_synonym", + "JW3095" + ], + [ + "gene_synonym", + "NP_417595.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23522" + ], + [ + "gene_synonym", + "b3126" + ], + [ + "gene_synonym", + "garL" + ], + [ + "gene_synonym", + "yhaF" + ] + ], + "dna_sequence": "ATGAATAACGATGTTTTCCCGAATAAATTCAAAGCCGCACTGGCTGCGAAACAGGTACAAATTGGTTGCTGGTCAGCACTCTCTAACCCGATTAGCACTGAAGTTCTTGGTTTGGCTGGGTTTGACTGGCTGGTGCTGGATGGCGAACATGCGCCAAACGATATCTCCACGTTTATTCCGCAGTTAATGGCCTTGAAAGGCAGCGCCAGCGCGCCAGTAGTGCGAGTGCCGACCAACGAGCCGGTAATTATTAAGCGTCTTCTGGATATCGGTTTCTATAACTTCCTGATTCCTTTTGTAGAAACAAAAGAGGAAGCAGAGCTGGCGGTGGCATCAACCCGTTACCCACCGGAAGGCATTCGCGGCGTCTCCGTTTCTCACCGCGCCAATATGTTTGGCACCGTGGCGGATTATTTCGCTCAGTCGAACAAGAACATCACTATTCTGGTCCAGATAGAAAGTCAGCAGGGCGTAGATAACGTCGATGCCATTGCCGCTACCGAAGGCGTAGACGGCATCTTCGTCGGCCCCAGCGATCTGGCCGCGGCATTAGGCCATCTCGGCAATGCATCACACCCGGATGTACAAAAAGCAATTCAGCACATTTTTAACCGTGCCAGCGCGCACGGCAAACCCAGCGGTATCCTCGCGCCGGTCGAAGCCGATGCGCGTCGTTATCTGGAATGGGGCGCGACGTTTGTGGCTGTCGGCAGCGATCTCGGCGTCTTCCGCTCTGCCACTCAGAAACTGGCTGATACCTTTAAAAAATAA", + "dna_sequence_length": 771, + "functions": [ + "alpha-dehydro-beta-deoxy-D-glucarate aldolase" + ], + "id": "CDS_3072", + "location": [ + [ + "NC_000913", + 3273557, + "-", + 771 + ] + ], + "md5": "f457d4712d606e693989461a0aabf876", + "parent_gene": "", + "protein_md5": "638f804e06ce31fe602a43c2d4c5e6b4", + "protein_translation": "MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010279" + ], + [ + "gene_synonym", + "ECK3115" + ], + [ + "gene_synonym", + "EcoGene:EG12760" + ], + [ + "gene_synonym", + "GI:16131019" + ], + [ + "gene_synonym", + "GeneID:947642" + ], + [ + "gene_synonym", + "JW3096" + ], + [ + "gene_synonym", + "NP_417596.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA80" + ], + [ + "gene_synonym", + "b3127" + ], + [ + "gene_synonym", + "garP" + ], + [ + "gene_synonym", + "yhaU" + ] + ], + "dna_sequence": "ATGATTCTGGACACCGTTGACGAAAAAAAGAAAGGCGTGCATACCCGCTATTTAATATTACTGATTATTTTTATTGTTACCGCCGTTAACTACGCCGATCGTGCAACGCTGTCTATTGCTGGTACCGAAGTGGCAAAAGAGTTGCAGTTAAGTGCGGTTTCGATGGGTTACATCTTCTCCGCTTTTGGCTGGGCCTACTTGCTGATGCAAATCCCCGGCGGCTGGCTGCTTGATAAGTTTGGCTCGAAAAAAGTTTACACCTACAGCCTCTTTTTCTGGTCGCTATTCACCTTCCTGCAAGGCTTTGTTGATATGTTCCCGCTGGCCTGGGCAGGGATCTCCATGTTCTTTATGCGCTTTATGCTCGGCTTCTCGGAAGCGCCATCATTCCCGGCGAACGCCCGAATTGTCGCCGCCTGGTTCCCGACGAAAGAACGTGGTACTGCCTCCGCCATCTTTAACTCGGCGCAATATTTCTCGCTGGCGCTCTTTTCGCCGCTGCTTGGCTGGCTGACTTTCGCCTGGGGCTGGGAGCACGTCTTTACCGTTATGGGGGTGATTGGTTTTGTGCTGACGGCGCTGTGGATCAAGTTGATTCATAACCCGACAGATCACCCACGTATGTCTGCGGAAGAGCTGAAGTTTATCTCTGAAAATGGCGCGGTGGTCGATATGGACCACAAAAAGCCGGGCAGTGCGGCAGCAAGCGGACCCAAACTGCATTACATCAAGCAATTGCTCTCTAACCGCATGATGCTGGGCGTATTTTTCGGACAATATTTTATCAACACCATCACCTGGTTCTTCCTCACCTGGTTCCCGATTTATCTGGTGCAGGAAAAAGGCATGTCGATTCTGAAAGTGGGTCTGGTCGCCTCGATTCCAGCACTGTGTGGTTTTGCGGGCGGCGTGCTGGGAGGTGTCTTCTCGGATTATCTGATCAAACGCGGTTTATCCCTGACCCTGGCACGTAAGCTACCGATTGTGCTGGGAATGTTGCTGGCTTCCACCATCATCTTATGTAACTACACCAACAACACCACGCTGGTGGTCATGCTGATGGCGCTGGCTTTCTTTGGCAAAGGATTTGGTGCGCTGGGCTGGCCGGTGATTTCTGACACCGCGCCGAAAGAGATTGTTGGCCTCTGCGGCGGCGTCTTTAACGTCTTTGGCAATGTTGCCTCCATTGTCACTCCACTGGTGATTGGCTACCTGGTAAGTGAACTGCACTCCTTCAATGCAGCACTGGTTTTCGTGGGATGTTCAGCGCTGATGGCGATGGTCTGCTACCTCTTCGTAGTTGGCGACATTAAACGTATGGAATTGCAGAAATAA", + "dna_sequence_length": 1335, + "functions": [ + "putative (D)-galactarate transporter" + ], + "id": "CDS_3073", + "location": [ + [ + "NC_000913", + 3274907, + "-", + 1335 + ] + ], + "md5": "8917a0296d0a74f6c07f11ec90195e59", + "parent_gene": "", + "protein_md5": "a9f67a7b71d1debd4fa3d6551bd8d009", + "protein_translation": "MILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK", + "protein_translation_length": 444, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010284" + ], + [ + "gene_synonym", + "ECK3116" + ], + [ + "gene_synonym", + "EcoGene:EG12522" + ], + [ + "gene_synonym", + "GI:16131020" + ], + [ + "gene_synonym", + "GeneID:947641" + ], + [ + "gene_synonym", + "JW3097" + ], + [ + "gene_synonym", + "NP_417597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39829" + ], + [ + "gene_synonym", + "b3128" + ], + [ + "gene_synonym", + "garD" + ], + [ + "gene_synonym", + "yhaG" + ] + ], + "dna_sequence": "ATGGCCAACATCGAAATCAGACAAGAAACGCCAACTGCGTTTTATATAAAAGTTCACGACACAGATAATGTGGCAATTATTGTTAATGATAATGGCCTGAAAGCAGGAACGCGTTTTCCGGATGGGCTGGAATTAATTGAACATATTCCCCAGGGGCATAAAGTCGCATTGCTGGACATTCCGGCTAATGGTGAAATTATTCGTTATGGCGAAGTGATTGGTTACGCCGTGCGTGCAATCCCACGCGGAAGCTGGATCGACGAATCAATGGTTGTACTACCGGAAGCGCCGCCGTTACACACGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATACCCGAACGTCGATGGCGTGGTGGGGCTGAATCATTTGTACGGTTGTGGCGTGGCGATTAACGCACCGGCGGCAGTTGTACCTATCCGTACCATTCACAATATTTCGCTGAATCCTAACTTTGGCGGCGAAGTAATGGTGATTGGCCTGGGTTGTGAAAAGTTGCAGCCTGAGCGCCTGCTGACTGGAACGGATGATGTGCAAGCTATTCCAGTAGAAAGCGCCAGCATTGTCAGTTTGCAGGATGAAAAGCATGTCGGTTTTCAGTCCATGGTCGAGGATATTTTGCAGATCGCCGAACGCCATCTACAAAAACTGAATCAACGGCAGCGAGAAACCTGCCCGGCTTCAGAACTGGTCGTTGGTATGCAGTGCGGTGGCAGCGATGCGTTTTCTGGTGTAACGGCAAACCCGGCGGTTGGCTATGCGTCTGATCTACTGGTGCGCTGCGGCGCAACGGTGATGTTTTCAGAAGTAACGGAAGTGCGTGACGCGATCCATCTGCTGACACCACGCGCAGTGAACGAAGAGGTCGGCAAACGGCTGCTGGAGGAGATGGAGTGGTACGATAACTATCTCAATATGGGAAAAACCGACCGCAGCGCCAACCCTTCGCCGGGCAACAAGAAAGGCGGTCTGGCAAACGTGGTAGAGAAGGCACTCGGCTCCATTGCTAAATCGGGTAAAAGCGCAATTGTTGAAGTGCTGTCGCCCGGTCAACGCCCGACTAAACGCGGATTAATTTACGCCGCGACGCCAGCCAGCGATTTTGTCTGTGGCACGCAACAGGTGGCTTCGGGTATCACAGTGCAAGTGTTTACGACCGGTCGTGGTACGCCGTACGGCCTGATGGCGGTACCCGTCATTAAAATGGCAACCCGCACCGAGCTGGCGAACCGCTGGTTTGATTTAATGGATATTAATGCGGGCACCATCGCTACCGGCGAAGAAACTATTGAAGAGGTGGGCTGGAAGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGA", + "dna_sequence_length": 1572, + "functions": [ + "D-galactarate dehydrogenase" + ], + "id": "CDS_3074", + "location": [ + [ + "NC_000913", + 3275282, + "+", + 1572 + ] + ], + "md5": "cfb80eb1999b03bb7920edfa32a54e29", + "parent_gene": "", + "protein_md5": "78261d16ff6656ac479f4550b2ddd7e2", + "protein_translation": "MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT", + "protein_translation_length": 523, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010287" + ], + [ + "gene_synonym", + "ECK3117" + ], + [ + "gene_synonym", + "EcoGene:EG10955" + ], + [ + "gene_synonym", + "GI:16131021" + ], + [ + "gene_synonym", + "GeneID:947639" + ], + [ + "gene_synonym", + "JW3098" + ], + [ + "gene_synonym", + "NP_417598.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15373" + ], + [ + "gene_synonym", + "b3129" + ], + [ + "gene_synonym", + "prlF" + ], + [ + "gene_synonym", + "sohA" + ] + ], + "dna_sequence": "ATGCCCGCTAATGCTCGCTCTCACGCTGTACTGACCACTGAATCAAAGGTCACGATACGCGGACAAACAACTATCCCCGCGCCAGTGCGTGAGGCCTTAAAACTGAAGCCAGGCCAGGACAGCATTCATTACGAAATTCTGCCTGGTGGGCAAGTATTTATGTGCCGACTGGGAGATGAACAGGAGGATCATACTATGAATGCATTTTTGCGTTTTCTGGATGCAGATATCCAGAACAACCCGCAAAAAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAA", + "dna_sequence_length": 336, + "functions": [ + "antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system" + ], + "id": "CDS_3075", + "location": [ + [ + "NC_000913", + 3277002, + "+", + 336 + ] + ], + "md5": "192506492e52120d883bdf01976d1d3b", + "parent_gene": "", + "protein_md5": "cf28abc88718dd7facf01872314fd648", + "protein_translation": "MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010289" + ], + [ + "gene_synonym", + "ECK3118" + ], + [ + "gene_synonym", + "EcoGene:EG12761" + ], + [ + "gene_synonym", + "GI:16131022" + ], + [ + "gene_synonym", + "GeneID:947638" + ], + [ + "gene_synonym", + "JW3099" + ], + [ + "gene_synonym", + "NP_417599.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64594" + ], + [ + "gene_synonym", + "b3130" + ], + [ + "gene_synonym", + "yhaV" + ] + ], + "dna_sequence": "ATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGA", + "dna_sequence_length": 465, + "functions": [ + "toxin of the SohB(PrlF)-YhaV toxin-antitoxin system" + ], + "id": "CDS_3076", + "location": [ + [ + "NC_000913", + 3277337, + "+", + 465 + ] + ], + "md5": "430c0d7541ac158144695b0f6d6f8374", + "parent_gene": "", + "protein_md5": "3b82fd43f53b87a7714a44c33bdddfb9", + "protein_translation": "MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010291" + ], + [ + "gene_synonym", + "ECK3119" + ], + [ + "gene_synonym", + "EcoGene:EG12762" + ], + [ + "gene_synonym", + "GI:16131023" + ], + [ + "gene_synonym", + "GeneID:947636" + ], + [ + "gene_synonym", + "JW3100" + ], + [ + "gene_synonym", + "NP_417600.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACK2" + ], + [ + "gene_synonym", + "agaR" + ], + [ + "gene_synonym", + "b3131" + ], + [ + "gene_synonym", + "yhaW" + ] + ], + "dna_sequence": "ATGAGTAATACCGACGCTTCAGGTGAGAAGCGAGTGACTGGCACCAGCGAGCGACGAGAACAGATCATTCAGCGTCTGCGACAGCAAGGGAGTGTGCAGGTTAACGATCTGTCGGCATTGTATGGCGTATCTACTGTGACGATCCGCAACGATCTGGCGTTTCTGGAAAAGCAGGGGATCGCTGTGCGTGCCTATGGTGGCGCGTTGATCTGCGATAGCACGACGCCGTCAGTCGAGCCATCAGTGGAAGATAAAAGCGCACTGAACACCGCGATGAAACGCAGCGTTGCGAAAGCTGCCGTTGAGTTGATTCAGCCAGGTCATCGGGTTATCCTCGATTCCGGGACCACCACTTTTGAGATTGCTCGTCTGATGCGCAAGCACACTGACGTAATTGCGATGACCAACGGTATGAACGTGGCTAATGCGTTGCTGGAAGCGGAAGGCGTTGAGCTGCTGATGACCGGCGGGCATTTGCGCCGTCAGTCGCAATCTTTTTACGGCGATCAGGCTGAGCAATCGCTGCAAAATTACCACTTCGATATGCTGTTTCTTGGTGTAGATGCGATCGATCTGGAGCGCGGCGTCAGCACACATAATGAAGATGAAGCTCGTTTAAACCGTCGGATGTGCGAAGTTGCGGAACGGATCATCGTGGTCACCGATTCCAGTAAGTTCAATCGTTCCAGTTTACATAAGATCATTGATACTCAACGTATCGACATGATCATTGTTGATGAAGGCATTCCTGCGGATAGCCTGGAAGGACTGCGAAAGGCTGGGGTTGAAGTGATTCTGGTCGGGGAGTGA", + "dna_sequence_length": 810, + "functions": [ + "transcriptional repressor of the aga regulon" + ], + "id": "CDS_3077", + "location": [ + [ + "NC_000913", + 3278665, + "-", + 810 + ] + ], + "md5": "ef65273affa13515bb25ae07ecd2e7c6", + "parent_gene": "", + "protein_md5": "ee2d2e7a80323569820151d9dbb37af8", + "protein_translation": "MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGE", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010295" + ], + [ + "gene_synonym", + "ECK3120" + ], + [ + "gene_synonym", + "EcoGene:EG12763" + ], + [ + "gene_synonym", + "GI:16131024" + ], + [ + "gene_synonym", + "GeneID:947637" + ], + [ + "gene_synonym", + "JW3101" + ], + [ + "gene_synonym", + "NP_417601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C8K0" + ], + [ + "gene_synonym", + "agaZ" + ], + [ + "gene_synonym", + "b3132" + ], + [ + "gene_synonym", + "kbaZ" + ], + [ + "gene_synonym", + "yhaX" + ] + ], + "dna_sequence": "GTGAAACATCTGACAGAAATGGTGAGACAGCACAAAGCGGGCAAAACAAATGGAATTTATGCCGTTTGTTCCGCACATCCGCTGGTGCTGGAAGCTGCAATCCGCTACGCCAGTGCAAACCAAACGCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAATGACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGATTATCAGCCCGCCAAAGCGAGCGCCTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGCTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAACGCCACGGGAACTCATTATCAACCATATTCAGGACATCCTGGCGCAGTACCACACAGCCTGTGAAGGCCAATAA", + "dna_sequence_length": 1281, + "functions": [ + "tagatose 6-phosphate aldolase 1, kbaZ subunit" + ], + "id": "CDS_3078", + "location": [ + [ + "NC_000913", + 3278914, + "+", + 1281 + ] + ], + "md5": "a2e390a7eb6a52ee129ab65c83f55e59", + "parent_gene": "", + "protein_md5": "8a74a634d70fa406820de29609a8a770", + "protein_translation": "MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPAAQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCLEHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTNVIDYQPAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSHYHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQYVKVRSGELQPTPRELIINHIQDILAQYHTACEGQ", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010297" + ], + [ + "gene_synonym", + "ECK3121" + ], + [ + "gene_synonym", + "EcoGene:EG12764" + ], + [ + "gene_synonym", + "GI:90111546" + ], + [ + "gene_synonym", + "GeneID:947648" + ], + [ + "gene_synonym", + "JW3102" + ], + [ + "gene_synonym", + "NP_417602.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42904" + ], + [ + "gene_synonym", + "agaV" + ], + [ + "gene_synonym", + "b3133" + ], + [ + "gene_synonym", + "yhaY" + ] + ], + "dna_sequence": "ATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGTCGGCGTTCAATGGGTCGGATTTGCGGGGGCAAATCTGGTGCTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTCATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGACAGAGCCTGCTGTGGACCTCTTTAAATTACTTTGA", + "dna_sequence_length": 474, + "functions": [ + "N-acetylgalactosamine-specific enzyme IIB component of PTS" + ], + "id": "CDS_3079", + "location": [ + [ + "NC_000913", + 3280217, + "+", + 474 + ] + ], + "md5": "32d9b17b4fd711eb5e297b1f07537da6", + "parent_gene": "", + "protein_md5": "42840e144b6695d5704ba5494f470c33", + "protein_translation": "MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKTAGVECFVQGVPTEPAVDLFKLL", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010299" + ], + [ + "gene_synonym", + "ECK3122" + ], + [ + "gene_synonym", + "EcoGene:EG12765" + ], + [ + "gene_synonym", + "GeneID:947647" + ], + [ + "gene_synonym", + "JW3103" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42905" + ], + [ + "gene_synonym", + "agaW" + ], + [ + "gene_synonym", + "b3134" + ], + [ + "gene_synonym", + "yhaZ" + ] + ], + "dna_sequence": "ATGGAAATCAGCCTGTTGCAGGCATTTGCGTTGGGCATTATCGCCTTTATCGCTGGCCTGGATATGTTTAACGGCCTAACCCATATGCACCGCCCGGTGGTCCTCGGCCCGTTGGTCGGGCTGGTACTTGGCGATCTGCATACCGGAATTTTAACCGGCGGTACGCTGGAACTGGTGTGGATGGGGCTGGCCCCGCTGGCGGGCGCACAGCCGCCTAACGTGATTATCGGTACTATCGTCGGCACGGCGTTTGCCATTACTACTGGCGTGAAACCCGATGTCGCAGTAGGTGTCGCCGTACCTTTCGCTGTCGCAGTACAGATGGGGATTACCTTCCTGTTCTCGGTGATGTCCGGCGTGATGTCTCGCTGCGAC", + "dna_sequence_length": 375, + "id": "CDS_3080", + "location": [ + [ + "NC_000913", + 3280701, + "+", + 375 + ] + ], + "md5": "744ca4e88843509140c7d333d9cd205f", + "parent_gene": "", + "protein_md5": "546dba07108dfc34bef8de5d2968d827", + "protein_translation": "MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVWMGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGVMSRCD", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010302" + ], + [ + "gene_synonym", + "ECK3123" + ], + [ + "gene_synonym", + "EcoGene:EG12766" + ], + [ + "gene_synonym", + "GeneID:947646" + ], + [ + "gene_synonym", + "JW5527" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42906" + ], + [ + "gene_synonym", + "agaA" + ], + [ + "gene_synonym", + "b3135" + ], + [ + "gene_synonym", + "yraA" + ] + ], + "dna_sequence": "GCGACCTGGCAACAAACCCGCGCCGCATTTGATGCTGGTGCCGACGGCCTGGTGCATTGCTATAACGGGATGACAGGTTTACATCACCGCGAACCGGGAATGGTTGGCGCGGGATTAACGGACAAGCGCGCCTGGCTGGAACTGATAGCCGATGGTCATCATGTGCATCCGGCGGCAATGTCGCTGTGTTGTTGCTGTGCGAAAGAGAGAATCGTACTGATCACCGACGCGATGCAGGCAGCTGGGATGCCGGATGGTCGCTATACGTTATGTGGTGAAGAAGTGCAGATGCACGGTGGCGTTGTCCGTACCGCGTCTGGTGGGCTGGCGGGCAGTACGCTGTCTGTTGATGCGGCAGTGCGCAATATGGTCGAGTTGACGGGCGTAACGCCTGCGGAAGCCATCCATATGGCGTCGCTGCATCCGGCGCGAATGCTGGGTGTTGATGGTGTTCTGGGATCGCTTAAACCGGGCAAACGCGCCAGCGTCGTTGCGCTGGATAGCGGGCTACATGTGCAACAAATCTGGATTCAGGGTCAATTAGCTTCGTTTTGA", + "dna_sequence_length": 555, + "id": "CDS_3081", + "location": [ + [ + "NC_000913", + 3281071, + "+", + 555 + ] + ], + "md5": "78ff2119c38cb649f6a1b1b7c15c932b", + "parent_gene": "", + "protein_md5": "b9571decaafecfd325f3dc9aeb822941", + "protein_translation": "ATWQQTRAAFDAGADGLVHCYNGMTGLHHREPGMVGAGLTDKRAWLELIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGRYTLCGEEVQMHGGVVRTASGGLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASVVALDSGLHVQQIWIQGQLASF", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010305" + ], + [ + "gene_synonym", + "ECK3124" + ], + [ + "gene_synonym", + "EcoGene:EG12767" + ], + [ + "gene_synonym", + "GI:16131028" + ], + [ + "gene_synonym", + "GeneID:947645" + ], + [ + "gene_synonym", + "JW3105" + ], + [ + "gene_synonym", + "NP_417605.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42907" + ], + [ + "gene_synonym", + "agaS" + ], + [ + "gene_synonym", + "b3136" + ], + [ + "gene_synonym", + "yraB" + ] + ], + "dna_sequence": "ATGCCAGAAAATTACACCCCTGCTGCCGCCGCAACCGGTACATGGACTGAAGAAGAGATCCGCCATCAGCCTCGCGCATGGATCCGTTCACTCACCAACATCGACGCGCTACGTTCCGCGCTCAATAACTTCCTTGAACCGTTACTGCGCAAAGAGAATCTGCGGATCATCCTGACCGGAGCCGGAACGTCGGCATTTATCGGTGACATCATCGCGCCGTGGCTCGCCAGCCATACCGGTAAAAACTTCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACGAAACGCTGGTGGTGGTATTTGTCTCCAGCCACCCTTACACCCGTCAGTATGATCTTGATCTGCTGGCTGAACTTCGCCGTGACAACCAGGCAATGCGTGTAATCGCCATCGCCGCGGAAAGCAGCGACATCGTCGCTGCCGGTCCACATATCATCCTGCCACCGTCACGTCACTTTATCGACGTTGAGCAGGCATTTTGCTTCCTGATGTACGCCCAGACGTTTGCACTGATGCAGTCGCTGCACATGGGCAATACGCCGGATACCCCATCAGCCAGTGGCACCGTTAACCGCGTGGTGCAAGGCGTAATCATTCATCCGTGGCAGGCATAA", + "dna_sequence_length": 1155, + "functions": [ + "tagatose-6-phosphate ketose/aldose isomerase" + ], + "id": "CDS_3082", + "location": [ + [ + "NC_000913", + 3281976, + "+", + 1155 + ] + ], + "md5": "202c9662b221ecb4e72a72494d5fe80a", + "parent_gene": "", + "protein_md5": "48597c0a2b3cc20f9a6fc6a41c67c758", + "protein_translation": "MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA", + "protein_translation_length": 384, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010307" + ], + [ + "gene_synonym", + "ECK3125" + ], + [ + "gene_synonym", + "EcoGene:EG12768" + ], + [ + "gene_synonym", + "GI:16131029" + ], + [ + "gene_synonym", + "GeneID:947644" + ], + [ + "gene_synonym", + "JW3106" + ], + [ + "gene_synonym", + "NP_417606.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB74" + ], + [ + "gene_synonym", + "agaY" + ], + [ + "gene_synonym", + "b3137" + ], + [ + "gene_synonym", + "kba" + ], + [ + "gene_synonym", + "kbaY" + ], + [ + "gene_synonym", + "yraC" + ] + ], + "dna_sequence": "ATGAGCATTATCTCCACTAAATATCTGTTACAGGACGCCCAGGCCAATGGCTACGCGGTGCCTGCTTTTAACATTCATAACGCCGAGACGATCCAAGCGATCCTCGAAGTGTGCAGTGAAATGCGATCGCCGGTGATCCTCGCCGGAACGCCGGGGACCTTTAAACACATCGCGCTGGAAGAGATCTACGCCCTGTGTAGCGCCTATTCCACAACCTACAACATGCCACTGGCGCTGCATCTCGACCACCACGAATCGCTGGATGATATTCGCCGTAAAGTCCACGCAGGTGTGCGCAGTGCGATGATCGACGGCAGCCACTTCCCGTTTGCCGAGAACGTGAAGCTGGTGAAATCGGTTGTTGACTTCTGCCACTCACAAGATTGCAGCGTGGAAGCAGAACTGGGCCGCCTGGGCGGTGTTGAAGATGACATGAGCGTTGACGCCGAAAGTGCATTCCTGACCGATCCACAAGAAGCTAAACGCTTTGTCGAACTGACTGGCGTCGACAGCCTGGCGGTAGCGATTGGTACGGCGCACGGCTTATACAGCAAAACGCCGAAGATTGATTTCCAGCGGCTGGCGGAAATTCGTGAAGTGGTGGATGTTCCTCTGGTGCTGCATGGTGCCAGCGATGTTCCGGATGAATTTGTCCGTCGCACTATTGAACTTGGCGTCACAAAAGTGAACGTTGCCACAGAATTAAAAATAGCCTTCGCTGGCGCGGTTAAAGCCTGGTTTGCGGAAAATCCGCAGGGTAATGATCCTCGTTATTATATGCGCGTCGGAATGGATGCGATGAAAGAAGTTGTCAGAAATAAAATTAATGTCTGTGGTTCAGCGAATCGAATTTCAGCATAA", + "dna_sequence_length": 861, + "functions": [ + "tagatose 6-phosphate aldolase 1, kbaY subunit" + ], + "id": "CDS_3083", + "location": [ + [ + "NC_000913", + 3283143, + "+", + 861 + ] + ], + "md5": "0bdd36c5c1b07581019e67ee13128a86", + "parent_gene": "", + "protein_md5": "a514fa9e4b4a12f2acbee366f3c2ef85", + "protein_translation": "MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010310" + ], + [ + "gene_synonym", + "ECK3126" + ], + [ + "gene_synonym", + "EcoGene:EG12769" + ], + [ + "gene_synonym", + "GI:16131030" + ], + [ + "gene_synonym", + "GeneID:947653" + ], + [ + "gene_synonym", + "JW3107" + ], + [ + "gene_synonym", + "NP_417607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42909" + ], + [ + "gene_synonym", + "agaB" + ], + [ + "gene_synonym", + "b3138" + ], + [ + "gene_synonym", + "yraD" + ] + ], + "dna_sequence": "ATGACCAGTCCAAATATTCTCTTAACCCGTATTGATAACCGTCTGGTTCACGGTCAGGTTGGCGTGACCTGGACATCCACCATCGGTGCAAATCTGCTGGTAGTCGTGGATGATGTTGTCGCTAACGATGATATTCAACAGAAATTAATGGGTATTACCGCGGAAACCTACGGCTTTGGCATTCGTTTCTTTACTATCGAAAAAACCATTAACGTCATCGGCAAAGCTGCACCACATCAGAAGATCTTCCTGATTTGCCGTACGCCACAAACGGTACGTAAATTGGTAGAAGGTGGTATTGACCTGAAAGATGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATCAGCAGTAAAGTTTATGTCGATGACCAGGATCTCACGGACTTACGTTTTATTAAACAACGTGGCGTGAATGTTTTCATTCAGGACGTCCCTGGCGATCAAAAAGAACAAATCCCTGACTAA", + "dna_sequence_length": 477, + "functions": [ + "N-acetylgalactosamine-specific enzyme IIB component of PTS" + ], + "id": "CDS_3084", + "location": [ + [ + "NC_000913", + 3284170, + "+", + 477 + ] + ], + "md5": "fd38514c74db0907e8799d53f3edce59", + "parent_gene": "", + "protein_md5": "f099bffd72d19c88f44a6c676ea178bf", + "protein_translation": "MTSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQRGVNVFIQDVPGDQKEQIPD", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010312" + ], + [ + "gene_synonym", + "ECK3127" + ], + [ + "gene_synonym", + "EcoGene:EG12770" + ], + [ + "gene_synonym", + "GI:16131031" + ], + [ + "gene_synonym", + "GeneID:947652" + ], + [ + "gene_synonym", + "JW3108" + ], + [ + "gene_synonym", + "NP_417608.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42910" + ], + [ + "gene_synonym", + "agaC" + ], + [ + "gene_synonym", + "b3139" + ], + [ + "gene_synonym", + "yraE" + ] + ], + "dna_sequence": "ATGCATGAAATAACCCTACTTCAGGGATTATCCCTGGCGGCGTTAGTTTTTGTTCTGGGGATTGATTTTTGGCTGGAAGCCTTATTTTTATTCCGCCCGATAATCGTTTGTACCCTAACTGGCGCTATTCTCGGTGATATTCAGACTGGCTTAATTACCGGTGGTCTGACAGAGTTGGCTTTCGCCGGATTAACCCCTGCAGGTGGTGTTCAGCCGCCCAACCCGATTATGGCGGGTCTGATGACCACCGTCATTGCATGGTCTACGGGCGTTGATGCCAAAACAGCAATTGGTCTTGGCCTGCCGTTTAGTTTGTTAATGCAGTACGTCATTCTGTTCTTCTATTCCGCTTTCTCATTATTTATGACCAAAGCCGATAAATGCGCGAAAGAGGCGGATACGGCAGCGTTTTCCCGGCTTAACTGGACAACGATGCTCATCGTCGCTTCAGCGTATGCGGTGATTGCTTTCCTCTGTACTTACCTGGCACAGGGGGCGATGCAGGCGCTGGTGAAAGCGATGCCCGCCTGGCTGACCCACGGCTTTGAAGTGGCTGGCGGTATTCTGCCTGCCGTTGGTTTTGGCTTGCTGCTGCGCGTAATGTTCAAAGCGCAATATATCCCTTACCTGATCGCCGGTTTCCTGTTTGTTTGCTACATCCAGGTCAGCAACCTGTTGCCGGTTGCCGTACTGGGCGCAGGCTTTGCGGTGTATGAGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATGAAGAAGAGGACTACAGCAATGGGATCTGA", + "dna_sequence_length": 804, + "functions": [ + "N-acetylgalactosamine-specific enzyme IIC component of PTS" + ], + "id": "CDS_3085", + "location": [ + [ + "NC_000913", + 3284685, + "+", + 804 + ] + ], + "md5": "e9909eb162ba65ff1c792c20947a833f", + "parent_gene": "", + "protein_md5": "135508bea4e52908ac79bdb356013219", + "protein_translation": "MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELAFAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010314" + ], + [ + "gene_synonym", + "ECK3128" + ], + [ + "gene_synonym", + "EcoGene:EG12771" + ], + [ + "gene_synonym", + "GI:16131032" + ], + [ + "gene_synonym", + "GeneID:947649" + ], + [ + "gene_synonym", + "JW3109" + ], + [ + "gene_synonym", + "NP_417609.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42911" + ], + [ + "gene_synonym", + "agaD" + ], + [ + "gene_synonym", + "b3140" + ], + [ + "gene_synonym", + "yraF" + ] + ], + "dna_sequence": "ATGGGATCTGAAATCAGTAAAAAAGATATCACCCGTCTGGGCTTTCGTTCGTCGCTGCTGCAAGCGAGCTTTAACTACGAAAGGATGCAGGCGGGCGGTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCTTAAGCGCGGCGATGAAAGATAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGCTGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATACCCACAGCGTTGCGCTGCAGCAGGATTTCTTCGATAAAGTCTTCCCGAACATTTTACCGATGGCCTACACCCTGCTGATGTATTACTTCCTGCGGGTGAAAAAAGCGCATCCGGTGCTGTTAATCGGCGTGACTTTTGTGCTCTCTATTGTTTGTTCCGCATTCGGCATTTTGTAA", + "dna_sequence_length": 792, + "functions": [ + "N-acetylgalactosamine-specific enzyme IID component of PTS" + ], + "id": "CDS_3086", + "location": [ + [ + "NC_000913", + 3285478, + "+", + 792 + ] + ], + "md5": "d9d9037dd7794b23b14b7dcd4859eb5e", + "parent_gene": "", + "protein_md5": "744096e9045c70e0d5fdee473cde6033", + "protein_translation": "MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDNTHSVALQQDFFDKVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010317" + ], + [ + "gene_synonym", + "ECK3129" + ], + [ + "gene_synonym", + "EcoGene:EG12772" + ], + [ + "gene_synonym", + "GI:16131033" + ], + [ + "gene_synonym", + "GeneID:947985" + ], + [ + "gene_synonym", + "JW3110" + ], + [ + "gene_synonym", + "NP_417610.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42912" + ], + [ + "gene_synonym", + "agaI" + ], + [ + "gene_synonym", + "b3141" + ], + [ + "gene_synonym", + "yraG" + ] + ], + "dna_sequence": "ATGGAACGAGGCACTGCGTCTGGTGGTGCCTCTTTACTTAAGGAATTTCATCCTGTGCAAACCCTTCAGCAAGTTGAAAACTATACGGCGTTAAGTGAACGTGCCAGCGAATATTTATTGGCCGTGATCCGTAGCAAACCGAATGCCGTGATTTGCCTGGCGACCGGAGCCACGCCATTACTGACGTATCATTATCTGGTAGAAAAAATCCACCAGCAGCAGGTTGATGTCAGCCAGCTCACCTTCGTGAAGCTCGACGAATGGGTGGATCTGCCATTAACGATGCCAGGCACCTGCGAAACTTTCCTGCAACAGCATATCGTGCAGCCGCTGGGGCTACGTGAAGACCAGCTCATCAGCTTTCGCTCCGAAGAGATAAATGAGACAGAGTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCCCGTGACTCGTGGGATCACCTTAGGCCTGAAGGATATTCTCAATGCCCGCGAAGTTTTGTTACTGGTGACTGGCGAAGGAAAGCAGGATGCGACAGATCGTTTTCTCACGGCTAAAGTCTCTACCGCTATCCCGGCTTCATTTTTATGGCTGCACAGTAACTTTATTTGTTTAATTAACACCTAA", + "dna_sequence_length": 756, + "functions": [ + "galactosamine-6-phosphate isomerase" + ], + "id": "CDS_3087", + "location": [ + [ + "NC_000913", + 3286270, + "+", + 756 + ] + ], + "md5": "f896088ae3ec993f93589328710a6708", + "parent_gene": "", + "protein_md5": "c946773f9b258681724ad4434bc73d20", + "protein_translation": "MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIRSKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATDRFLTAKVSTAIPASFLWLHSNFICLINT", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010325" + ], + [ + "gene_synonym", + "ECK3130" + ], + [ + "gene_synonym", + "EcoGene:EG12773" + ], + [ + "gene_synonym", + "GI:16131034" + ], + [ + "gene_synonym", + "GeneID:947658" + ], + [ + "gene_synonym", + "JW3111" + ], + [ + "gene_synonym", + "NP_417611.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42913" + ], + [ + "gene_synonym", + "b3142" + ], + [ + "gene_synonym", + "yraH" + ] + ], + "dna_sequence": "ATGAATAAAGTTACAAAAACAGCTATTGCGGGCTTACTTGCGCTTTTCGCAGGTAATGCCGCTGCAACCGATGGTGAAATAGTTTTTGATGGCGAGATTTTAAAATCCGCTTGTGAAATCAATGACTCTGATAAGAAAATTGAAGTTGCTCTTGGTCACTATAATGCCGAACAGTTTCGTAATATTGGCGAGCGTAGCCCAAAAATTCCATTCACTATTCCTTTAGTTAACTGCCCAATGACTGGGTGGGAGCACGATAACGGCAACGTTGAAGCGTCTTTCCGTCTATGGCTGGAAACGCGAGATAATGGCACCGTCCCTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTGGGTATCCGTATTGACGATGCGGAAAGCGGAAACATTATGCCACTGAATGCTATGGGCAATGATAACACGGTTTATCAGATCCCGGCGGAATCCAATGGTATTGTCAATGTTGACCTCATCGCTTACTACGTATCAACCGTAGTTCCATCAGAAATCACCCCAGGGGAAGCAGACGCTATCGTTAACGTAACGCTGGATTACCGTTAA", + "dna_sequence_length": 585, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_3088", + "location": [ + [ + "NC_000913", + 3287426, + "+", + 585 + ] + ], + "md5": "1216d033eb1c7aebd856c0b2203373bd", + "parent_gene": "", + "protein_md5": "2ddd5d3ced6bd1964b5de3e768fb55dc", + "protein_translation": "MNKVTKTAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRNIGERSPKIPFTIPLVNCPMTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPAESNGIVNVDLIAYYVSTVVPSEITPGEADAIVNVTLDYR", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010331" + ], + [ + "gene_synonym", + "ECK3131" + ], + [ + "gene_synonym", + "EcoGene:EG12774" + ], + [ + "gene_synonym", + "GI:16131035" + ], + [ + "gene_synonym", + "GeneID:947657" + ], + [ + "gene_synonym", + "JW3112" + ], + [ + "gene_synonym", + "NP_417612.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42914" + ], + [ + "gene_synonym", + "b3143" + ], + [ + "gene_synonym", + "yraI" + ] + ], + "dna_sequence": "ATGTCAAAACGAACATTCGCGGTGATATTAACCTTGTTGTGTAGCTTCTGTATTGGCCAGGCGCTTGCAGGAGGAATCGTTTTACAGCGAACGCGAGTGATCTATGATGCCAGCCGCAAAGAGGCTGCGTTACCTGTCGCAAACAAAGGCGCAGAAACGCCTTATTTACTGCAATCATGGGTAGATAATATAGATGGTAAAAGCCGTGCCCCATTTATTATAACCCCACCGCTATTTCGTCTTGAGGCTGGCGATGACTCATCACTGCGAATTATTAAAACAGCTGATAACCTGCCTGAAAATAAAGAGTCGCTGTTCTACATTAATGTTCGTGCCATTCCAGCAAAGAAAAAATCAGATGATGTTAATGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCCAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGATCAATGATTATGGCGGCAGTTCCGGGACAGAAACTCGTCCACTGCAATAA", + "dna_sequence_length": 696, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_3089", + "location": [ + [ + "NC_000913", + 3288090, + "+", + 696 + ] + ], + "md5": "3f4a478b0e592947acf24fd8d5be3817", + "parent_gene": "", + "protein_md5": "42f411ca14278794ea5de37c9f2580c2", + "protein_translation": "MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010333" + ], + [ + "gene_synonym", + "ECK3132" + ], + [ + "gene_synonym", + "EcoGene:EG12775" + ], + [ + "gene_synonym", + "GI:16131036" + ], + [ + "gene_synonym", + "GeneID:947656" + ], + [ + "gene_synonym", + "JW3113" + ], + [ + "gene_synonym", + "NP_417613.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42915" + ], + [ + "gene_synonym", + "b3144" + ], + [ + "gene_synonym", + "yraJ" + ] + ], + "dna_sequence": "ATGCCACAACGACACCACCAGGGACATAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAAGAGGTTACGTCTCCCCTTCTCGTTGGGACGATGGTATACCAACGCTGTTTACCAACTACTCGTTTACAGGTTCTGATAACCGTTACCGCCAGGGCAATCGTAGCCAACGACAGTACCTGAATATGCAAAATGGTGCTAATTTTGGCCCCTGGCGATTACGCAACTATTCCACATGGACACGCAACGATCAGACATCAAGCTGGAATACCATCAGTAGTTATTTACAACGTGATATCAAGGCGTTGAAGTCTCAGTTGCTTCTGGGAGAAAGCGCCACCAGCGGCAGTATTTTTTCCAGCTACACCTTTACTGGCGTGCAACTCGCTTCCGACGATAATATGTTGCCAAACAGCCAGCGCGGATTTGCCCCAACGGTACGCGGTATCGCAAACAGTAGTGCAATCGTGACTATCAGGCAAAATGGTTATGTGATCTATCAAAGCAACGTGTCAGCGGGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGATCGGTATCGGCGGCACACTTGGCGCACTGGGCGCGTTGTCGATGGATATCAACAGAGCTGACACCCAATTCGATAACCAGCACTCTTTTCATGGCTATCAATGGCGTACGCAGTACATCAAAGATATCCCGGAAACCAACACCAATATCGCTGTCAGCTACTATCGCTATACCAACGATGGCTATTTTAGTTTTAATGAAGCCAATACCCGCAATTGGGACTATAACAGTCGCCAAAAAAGTGAAATTCAATTCAACATCAGCCAGACAATATTTGATGGGGTAAGTCTGTATGCCTCCGGTTCGCAGCAAGACTATTGGGGCAATAACGATAAAAACAGGAATATCTCTGTTGGGGTTTCCGGCCAGCAATGGGGAGTTGGTTACAGCCTGAATTATCAATACAGCCGCTACACTGATCAAAATAATGACCGCGCACTCTCTTTGAATCTCAGTATTCCGTTAGAACGCTGGTTACCGCGTAGCCGGGTTTCCTATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTGGTGCCCAACAGAGGTGCAATGGTAGCGGCGCGTTTCAACGCCAATATCGGTTATCGCGTACTTGTTACAGTCAGCGATCGCAACGGTAAACCGTTGCCCTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAA", + "dna_sequence_length": 2517, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_3090", + "location": [ + [ + "NC_000913", + 3288814, + "+", + 2517 + ] + ], + "md5": "db7224e306848654dcc990da32a40547", + "parent_gene": "", + "protein_md5": "88e23865e756e26a93d203bfb46001d7", + "protein_translation": "MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH", + "protein_translation_length": 838, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010335" + ], + [ + "gene_synonym", + "ECK3133" + ], + [ + "gene_synonym", + "EcoGene:EG12776" + ], + [ + "gene_synonym", + "GI:16131037" + ], + [ + "gene_synonym", + "GeneID:947654" + ], + [ + "gene_synonym", + "JW3114" + ], + [ + "gene_synonym", + "NP_417614.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43319" + ], + [ + "gene_synonym", + "b3145" + ], + [ + "gene_synonym", + "yraK" + ] + ], + "dna_sequence": "ATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGATGTTATTAAGGTTAATTTTGGATTCATCAATGGTCAGAAGTTTACCACCCGCAATGCCATGCCAGACGGTTTTACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCAGAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAA", + "dna_sequence_length": 1092, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_3091", + "location": [ + [ + "NC_000913", + 3291341, + "+", + 1092 + ] + ], + "md5": "c42b41fa73cd0c41152964838d3b987d", + "parent_gene": "", + "protein_md5": "ec519397f90fedbe20f6c18a5ec78168", + "protein_translation": "MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR", + "protein_translation_length": 363, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010337" + ], + [ + "gene_synonym", + "ECK3134" + ], + [ + "gene_synonym", + "EcoGene:EG12777" + ], + [ + "gene_synonym", + "GI:16131038" + ], + [ + "gene_synonym", + "GeneID:947664" + ], + [ + "gene_synonym", + "JW3115" + ], + [ + "gene_synonym", + "NP_417615.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67087" + ], + [ + "gene_synonym", + "b3146" + ], + [ + "gene_synonym", + "rsmI" + ], + [ + "gene_synonym", + "yraL" + ] + ], + "dna_sequence": "ATGAAACAACACCAATCGGCGGATAATTCTCAGGGCCAGCTTTACATTGTACCGACGCCAATCGGCAATCTGGCGGATATCACCCAGCGTGCGTTAGAGGTATTACAGGCCGTTGATCTGATTGCCGCCGAGGATACTCGTCACACCGGTTTATTGCTGCAACATTTTGGGATTAATGCCCGGTTGTTTGCGCTGCACGACCATAACGAACAACAAAAAGCTGAAACGCTGCTGGCGAAGCTGCAAGAGGGGCAAAACATTGCGCTGGTTTCCGATGCCGGAACGCCGCTAATTAACGATCCTGGCTACCATCTGGTGCGTACCTGCCGTGAAGCGGGGATCCGCGTGGTGCCGCTACCCGGGCCGTGTGCTGCTATCACTGCGTTAAGCGCAGCGGGTTTACCCTCTGACCGTTTCTGTTACGAAGGCTTTTTACCTGCCAAATCAAAAGGCCGCCGTGATGCGCTAAAAGCCATTGAAGCGGAGCCGCGCACGCTGATTTTTTATGAATCTACCCACCGTCTGTTAGATAGCCTGGAAGATATCGTTGCGGTATTAGGCGAATCCCGCTACGTGGTTCTGGCGCGTGAGCTGACCAAAACCTGGGAAACCATTCACGGCGCGCCCGTTGGCGAGCTGCTGGCGTGGGTAAAGGAAGATGAAAACCGTCGCAAAGGCGAAATGGTGCTGATTGTCGAAGGTCATAAAGCACAGGAAGAAGACTTACCCGCCGATGCCCTGCGCACGCTGGCGCTGCTACAGGCAGAACTGCCGCTGAAAAAAGCGGCGGCGCTGGCCGCAGAAATTCACGGCGTGAAGAAAAATGCGCTGTATAAGTATGCGCTGGAGCAGCAGGGGTAA", + "dna_sequence_length": 861, + "functions": [ + "16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent" + ], + "id": "CDS_3092", + "location": [ + [ + "NC_000913", + 3293335, + "-", + 861 + ] + ], + "md5": "dc39b2f14babac4f785e84becd9b79b0", + "parent_gene": "", + "protein_md5": "455e664b1c8fe97fa200485a1d5a212b", + "protein_translation": "MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010343" + ], + [ + "gene_synonym", + "ECK3135" + ], + [ + "gene_synonym", + "EcoGene:EG12778" + ], + [ + "gene_synonym", + "GI:16131039" + ], + [ + "gene_synonym", + "GeneID:947663" + ], + [ + "gene_synonym", + "JW3116" + ], + [ + "gene_synonym", + "NP_417616.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45464" + ], + [ + "gene_synonym", + "b3147" + ], + [ + "gene_synonym", + "lpoA" + ], + [ + "gene_synonym", + "yraM" + ] + ], + "dna_sequence": "ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTGTGGCACCCATACTCCCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGAGATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACCAGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCTCAGGAACCGCTGCTTGGCGCGAAAGAAAAACAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGAACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATAACCGTAACGATCCCGACATGATGAAAGCCGGGATCGCCGACTGGCAGAAACGTTATCCGAACAATCCGGGCGCGAAAATGCTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCACTGAATGGCCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCAGCTCAGGTAGCTGCCGCACCTGCCGCAGACGTAGCTGAACAACCTCAGCCGCAAACCGTGGATGGCGTTGCCAGCCCGGCACAAGCCTCGGTTAGCGATCTGACCGGTGAACAGCCTGCAGCCCAGCCGGTGCCTGTAAGCGCCCCGGCGACAAGCACCGCAGCGGTAAGCGCACCCGCAAATCCATCCGCAGAGCTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCCAGGTTCAGCAGGATGGCGCGAGTATTGTGGTCGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTGAAGAGCAACACTCCGCTGAACGTACTGGCACTGAACCAGCCGGAGAATATCGAAAATCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGAAGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCATTGGGCGATCGCGTAGCCAATGCGTTTGCGCAAGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGTTCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATTGCTTTAACGGGTAGCCCGATTACTCTCAGAGCGACAACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTTCAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCTAACCCGGATTGCGTGATTAACAGGAACTTATCATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAA", + "dna_sequence_length": 2037, + "functions": [ + "OM lipoprotein stimulator of MrcA transpeptidase" + ], + "id": "CDS_3093", + "location": [ + [ + "NC_000913", + 3293400, + "+", + 2037 + ] + ], + "md5": "f57338928a6b32ab98013cbdd62424cd", + "parent_gene": "", + "protein_md5": "d121d690f3a9d11994e53d9c566f1663", + "protein_translation": "MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS", + "protein_translation_length": 678, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010346" + ], + [ + "gene_synonym", + "ECK3136" + ], + [ + "gene_synonym", + "EcoGene:EG12779" + ], + [ + "gene_synonym", + "GI:16131040" + ], + [ + "gene_synonym", + "GeneID:947662" + ], + [ + "gene_synonym", + "JW3117" + ], + [ + "gene_synonym", + "NP_417617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45465" + ], + [ + "gene_synonym", + "b3148" + ], + [ + "gene_synonym", + "yraN" + ] + ], + "dna_sequence": "ATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGGTTTATCGCCGCTAACGTGAACGAGCGTGGCGGCGAGATCGATCTGATAATGCGTGAAGGCCGGACCACCATTTTTGTCGAGGTACGCTATCGCCGCTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTGACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGCTCGCGCGTCATAATGGGAGTTTTGATACTGTGGATTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGGATTAAGGATGCCTTTAATGACCACTCATAA", + "dna_sequence_length": 396, + "functions": [ + "UPF0102 family protein" + ], + "id": "CDS_3094", + "location": [ + [ + "NC_000913", + 3295394, + "+", + 396 + ] + ], + "md5": "6d07582173b77b57a1cd8b5fbbb585f1", + "parent_gene": "", + "protein_md5": "e61d6c47f0c413069058deb6dcf035d8", + "protein_translation": "MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010348" + ], + [ + "gene_synonym", + "ECK3137" + ], + [ + "gene_synonym", + "EcoGene:EG12780" + ], + [ + "gene_synonym", + "GI:16131041" + ], + [ + "gene_synonym", + "GeneID:947661" + ], + [ + "gene_synonym", + "JW3118" + ], + [ + "gene_synonym", + "NP_417618.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66817" + ], + [ + "gene_synonym", + "b3149" + ], + [ + "gene_synonym", + "diaA" + ], + [ + "gene_synonym", + "yraO" + ] + ], + "dna_sequence": "GTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAACAAAATCCTCTGTTGTGGTAATGGAACTTCCGCTGCCAATGCACAGCATTTTGCTGCCAGCATGATCAACCGTTTCGAAACGGAGCGGCCCAGCTTACCTGCCATTGCACTAAATACTGATAATGTTGTCTTAACGGCGATTGCCAACGATCGCTTACATGATGAAGTGTATGCAAAACAGGTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCAGGATGATTAA", + "dna_sequence_length": 591, + "functions": [ + "DnaA initiator-associating factor for replication initiation" + ], + "id": "CDS_3095", + "location": [ + [ + "NC_000913", + 3295809, + "+", + 591 + ] + ], + "md5": "e377f296f4e07015b7a6f0d550925c4e", + "parent_gene": "", + "protein_md5": "13a4d98c5cb15799c01ed76a12ca229e", + "protein_translation": "MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010350" + ], + [ + "gene_synonym", + "ECK3138" + ], + [ + "gene_synonym", + "EcoGene:EG12781" + ], + [ + "gene_synonym", + "GI:16131042" + ], + [ + "gene_synonym", + "GeneID:947659" + ], + [ + "gene_synonym", + "JW3119" + ], + [ + "gene_synonym", + "NP_417619.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64596" + ], + [ + "gene_synonym", + "b3150" + ], + [ + "gene_synonym", + "ecfH" + ], + [ + "gene_synonym", + "yraP" + ] + ], + "dna_sequence": "ATGAAGGCATTATCGCCAATCGCAGTCCTTATTTCCGCGCTGCTGTTGCAAGGTTGTGTTGCCGCTGCCGTAGTGGGTACCGCTGCTGTGGGTACCAAAGCCGCAACTGACCCACGCAGTGTCGGCACCCAGGTGGACGATGGTACCCTGGAAGTGCGCGTGAACAGCGCATTGTCGAAAGACGAACAGATTAAGAAAGAAGCGCGCATTAATGTAACGGCCTATCAGGGCAAAGTGCTGCTGGTTGGGCAGTCACCAAATGCTGAACTTTCGGCTCGCGCCAAACAGATTGCTATGGGCGTAGACGGTGCCAACGAAGTGTATAACGAGATTCGTCAGGGCCAGCCGATTGGTCTGGGCGAAGCATCTAACGATACGTGGATCACCACCAAAGTGCGTTCGCAGCTCTTAACCAGCGACCTGGTGAAATCGTCCAACGTGAAAGTGACCACCGAAAACGGTGAAGTGTTCCTGATGGGGCTGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAG", + "dna_sequence_length": 576, + "functions": [ + "outer membrane lipoprotein" + ], + "id": "CDS_3096", + "location": [ + [ + "NC_000913", + 3296409, + "+", + 576 + ] + ], + "md5": "276a8d5d39d2e43f7f5947a9fa35ba13", + "parent_gene": "", + "protein_md5": "3182b332d3bf53110c047a967d45302d", + "protein_translation": "MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFIK", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010353" + ], + [ + "gene_synonym", + "ECK3139" + ], + [ + "gene_synonym", + "EcoGene:EG12782" + ], + [ + "gene_synonym", + "GI:16131043" + ], + [ + "gene_synonym", + "GeneID:947668" + ], + [ + "gene_synonym", + "JW3120" + ], + [ + "gene_synonym", + "NP_417620.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45468" + ], + [ + "gene_synonym", + "b3151" + ], + [ + "gene_synonym", + "yraQ" + ] + ], + "dna_sequence": "ATGACTGGTCAGTCTTCATCTCAGGCGGCAACGCCCATTCAGTGGTGGAAACCCGCGCTTTTCTTTCTCGTTGTCATTGCCGGTCTCTGGTATGTGAAATGGGAACCTTACTACGGCAAAGCGTTTACTGCTGCCGAAACCCACAGTATCGGTAAATCTATCCTTGCGCAGGCGGATGCTAACCCATGGCAGGCGGCGTTGGATTACGCGATGATCTATTTCCTCGCGGTATGGAAAGCGGCGGTGCTGGGGGTGATCCTCGGTTCGTTGATTCAGGTGCTGATCCCGCGTGACTGGTTGTTGCGTACGCTTGGGCAATCGCGCTTTCGCGGCACGCTGCTGGGAACGCTGTTTTCGTTGCCGGGCATGATGTGTACCTGCTGTGCGGCTCCGGTCGCGGCGGGAATGCGTCGCCAACAGGTGTCGATGGGCGGTGCGCTGGCATTCTGGATGGGCAATCCGGTGTTAAACCCGGCGACGCTGGTGTTTATGGGCTTTGTCCTCGGCTGGGGTTTTGCGGCGATTCGTCTGGTGGCCGGGCTGGTGATGGTGTTGCTGATTGCGACGCTGGTGCAAAAATGGGTGCGTGAAACACCGCAAACGCAGGCACCGGTCGAAATTGACATACCGGAAGCACAGGGCGGGTTTTTTAGCCGCTGGGGCAGGGCGCTATGGACGCTTTTCTGGAGTACGATCCCGGTTTACATCCTTGCAGTACTGGTGTTGGGTGCCGCTCGCGTCTGGTTATTCCCCCATGCCGATGGTGCTGTCGATAACAGCCTGATGTGGGTGGTGGCGATGGCGGTAGCAGGATGCTTGTTTGTCATTCCCACGGCAGCAGAAATTCCGATTGTACAAACGATGATGCTGGCAGGTATGGGAACCGCTCCGGCGCTGGCATTGTTGATGACGCTCCCGGCAGTGAGTTTGCCGTCACTGATTATGCTGCGCAAAGCGTTCCCGGCGAAAGCCTTATGGCTGACAGGGGCGATGGTGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGA", + "dna_sequence_length": 1041, + "functions": [ + "putative inner membrane permease" + ], + "id": "CDS_3097", + "location": [ + [ + "NC_000913", + 3298138, + "-", + 1041 + ] + ], + "md5": "8ff658278f45d8ca7bae2764076da3d3", + "parent_gene": "", + "protein_md5": "ed5d89bf2347e407b119f5df4193209b", + "protein_translation": "MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010356" + ], + [ + "gene_synonym", + "ECK3140" + ], + [ + "gene_synonym", + "EcoGene:EG12783" + ], + [ + "gene_synonym", + "GI:90111547" + ], + [ + "gene_synonym", + "GeneID:947667" + ], + [ + "gene_synonym", + "JW5528" + ], + [ + "gene_synonym", + "NP_417621.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45469" + ], + [ + "gene_synonym", + "b3152" + ], + [ + "gene_synonym", + "yraR" + ] + ], + "dna_sequence": "ATGAGTCAGGTACTGATTACAGGCGCAACGGGGCTGGTGGGCGGTCACCTGCTGCGGATGTTGATTAACGAACCGAAAGTTAACGCCATTGCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGAGGCGTTTATTCATGCCGATTACACGCTGGTAGTGGATACCGCATTAACCGGGCGGCGACTGGGCGCGCAGCATATGTTGGTAGTCAGTGCGATGGGTGCCAATGCCCACTCGCCGTTTTTCTATAACCGCGTCAAAGGGGAGATGGAAGAAGCATTAATCGCCCAGAACTGGCCGAAATTGACCATTGCTCGCCCGTCGATGTTACTGGGCGATCGTAGCAAACAGCGGATGAACGAAACGCTTTTTGCGCCGCTGTTCCGTTTGTTACCAGGTAACTGGAAATCCATTGATGCGAGAGACGTGGCGCGGGTCATGCTGGCAGAGTCGATGCGGCCTGAGCATGAAGGCGTGACGATTTTAAGCTCTTCAGAATTACGCAAAAGAGCTGAATAA", + "dna_sequence_length": 636, + "functions": [ + "putative nucleoside-diphosphate-sugar epimerase" + ], + "id": "CDS_3098", + "location": [ + [ + "NC_000913", + 3298846, + "-", + 636 + ] + ], + "md5": "506f45336a023863370725a059b32a93", + "parent_gene": "", + "protein_md5": "5f6ff897400e90b230e3132fadc227a3", + "protein_translation": "MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010361" + ], + [ + "gene_synonym", + "ECK3141" + ], + [ + "gene_synonym", + "EcoGene:EG12784" + ], + [ + "gene_synonym", + "GI:90111548" + ], + [ + "gene_synonym", + "GeneID:947666" + ], + [ + "gene_synonym", + "JW5529" + ], + [ + "gene_synonym", + "NP_417622.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45470" + ], + [ + "gene_synonym", + "b3153" + ], + [ + "gene_synonym", + "yhbO" + ] + ], + "dna_sequence": "ATGAGTAAGAAAATTGCCGTTTTAATCACTGATGAATTTGAGGATTCAGAATTTACTTCACCCGCAGACGAGTTCCGTAAAGCCGGACACGAAGTGATTACCATTGAAAAACAAGCGGGTAAAACGGTGAAAGGCAAAAAAGGAGAAGCCAGCGTGACCATCGATAAATCCATCGATGAAGTGACGCCTGCGGAGTTTGATGCCCTGCTGCTACCGGGCGGCCATTCACCGGATTATCTGCGTGGGGACAACCGTTTTGTCACCTTTACCCGTGATTTTGTGAATAGTGGCAAACCGGTGTTTGCCATCTGTCACGGCCCGCAGTTGCTGATCAGCGCCGATGTGATTCGGGGGCGCAAACTGACCGCAGTTAAACCGATCATTATTGATGTTAAAAATGCGGGCGCGGAATTTTACGATCAGGAAGTCGTGGTTGATAAAGATCAGCTGGTTACCAGCCGGACACCGGACGATCTGCCAGCGTTTAACCGCGAGGCGTTACGCCTGCTCGGTGCCTGA", + "dna_sequence_length": 519, + "functions": [ + "stress-resistance protein" + ], + "id": "CDS_3099", + "location": [ + [ + "NC_000913", + 3298974, + "+", + 519 + ] + ], + "md5": "952ba3a07bdf283346261e9d20e672fa", + "parent_gene": "", + "protein_md5": "9aa82d4890c709acd158573fb5dcfc10", + "protein_translation": "MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA", + "protein_translation_length": 172, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010363" + ], + [ + "gene_synonym", + "ECK3142" + ], + [ + "gene_synonym", + "EcoGene:EG12785" + ], + [ + "gene_synonym", + "GI:16131046" + ], + [ + "gene_synonym", + "GeneID:947665" + ], + [ + "gene_synonym", + "JW3123" + ], + [ + "gene_synonym", + "NP_417623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67762" + ], + [ + "gene_synonym", + "b3154" + ], + [ + "gene_synonym", + "yhbP" + ] + ], + "dna_sequence": "ATGGAAACACTCATCGCCATCAGCCGTTGGCTGGCAAAACAACATGTTGTCACTTGGTGTGTGCAGCAGGAAGGGGAACTCTGGTGCGCTAATGCCTTTTATCTTTTTGATGCGCAGAAAGTCGCCTTCTACATTTTGACGGAAGAAAAAACGCGCCACGCGCAGATGAGTGGGCCGCAGGCTGCGGTTGCCGGAACGGTAAACGGTCAGCCGAAAACGGTAGCGTTAATTCGCGGTGTGCAGTTTAAAGGTGAGATCCGCAGGCTGGAAGGTGAGGAAAGCGACCTCGCGCGCAAGGCGTACAATCGTCGCTTTCCGGTTGCCAGAATGCTGTCGGCCCCGGTGTGGGAAATCCGGCTCGATGAAATCAAATTCACCGACAACACGCTGGGCTTTGGTAAAAAAATGATTTGGCTACGCGACTCAGGCACCGAGCAGGCGTAA", + "dna_sequence_length": 444, + "functions": [ + "UPF0306 family protein" + ], + "id": "CDS_3100", + "location": [ + [ + "NC_000913", + 3299915, + "-", + 444 + ] + ], + "md5": "6e96d2afadf4385618a71979185a0ea5", + "parent_gene": "", + "protein_md5": "0275d594d49c1f6c3d8cdb5b1e06f89f", + "protein_translation": "METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010370" + ], + [ + "gene_synonym", + "ECK3143" + ], + [ + "gene_synonym", + "EcoGene:EG12786" + ], + [ + "gene_synonym", + "GI:16131047" + ], + [ + "gene_synonym", + "GeneID:947671" + ], + [ + "gene_synonym", + "JW3124" + ], + [ + "gene_synonym", + "NP_417624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45472" + ], + [ + "gene_synonym", + "b3155" + ], + [ + "gene_synonym", + "yhbQ" + ] + ], + "dna_sequence": "ATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGCGATCGTTCGCTGGCGTTACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGA", + "dna_sequence_length": 303, + "functions": [ + "GIY-YIG nuclease superfamily protein" + ], + "id": "CDS_3101", + "location": [ + [ + "NC_000913", + 3299966, + "+", + 303 + ] + ], + "md5": "34cf58ff781e65605a897064b8f90d8f", + "parent_gene": "", + "protein_md5": "7b94eebf779c750e05e2ca5fdba4a318", + "protein_translation": "MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD", + "protein_translation_length": 100, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010373" + ], + [ + "gene_synonym", + "ECK3144" + ], + [ + "gene_synonym", + "EcoGene:EG12788" + ], + [ + "gene_synonym", + "GI:16131048" + ], + [ + "gene_synonym", + "GeneID:947670" + ], + [ + "gene_synonym", + "JW3125" + ], + [ + "gene_synonym", + "NP_417625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63417" + ], + [ + "gene_synonym", + "b3156" + ], + [ + "gene_synonym", + "yhbS" + ] + ], + "dna_sequence": "ATGCTAATTCGAGTAGAAATTCCCATTGATGCGCCGGGTATTGATGCCCTGCTGCGTCGCTCATTCGAAAGTGATGCGGAAGCGAAGCTGGTTCACGATCTGCGTGAAGATGGCTTTCTGACGCTGGGGCTGGTGGCGACAGATGACGAAGGTCAGGTCATTGGCTATGTGGCATTTAGTCCGGTTGATGTGCAGGGCGAAGACCTGCAATGGGTCGGCATGGCACCGTTGGCGGTTGATGAAAAATACCGTGGACAGGGGCTGGCACGCCAACTGGTCTATGAAGGACTCGATTCGCTTAATGAGTTCGGCTATGCCGCAGTGGTGACGCTGGGCGATCCGGCGCTGTACAGTCGTTTCGGCTTTGAACTGGCGGCGCATCACGATCTGCGTTGCCGCTGGCCGGGCACTGAAAGCGCCTTCCAGGTACATCGTTTAGCGGATGACGCGCTGAATGGCGTTACCGGCCTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAA", + "dna_sequence_length": 504, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_3102", + "location": [ + [ + "NC_000913", + 3300758, + "-", + 504 + ] + ], + "md5": "0f887ab2095e788328c1e60db8ce0ea4", + "parent_gene": "", + "protein_md5": "d1085cd555e31f30dc7869b9c267bdd5", + "protein_translation": "MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010375" + ], + [ + "gene_synonym", + "ECK3145" + ], + [ + "gene_synonym", + "EcoGene:EG12789" + ], + [ + "gene_synonym", + "GI:16131049" + ], + [ + "gene_synonym", + "GeneID:947669" + ], + [ + "gene_synonym", + "JW3126" + ], + [ + "gene_synonym", + "NP_417626.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64599" + ], + [ + "gene_synonym", + "b3157" + ], + [ + "gene_synonym", + "yhbT" + ] + ], + "dna_sequence": "GTGTTGGATAAACTGCGTTCCCGTATTGTGCATTTGGGGCCATCTCTGTTGAGTGTACCGGTAAAACTGACGCCATTTGCGCTAAAACGCCAGGTTCTTGAGCAGGTCTTAAGCTGGCAATTCCGCCAGGCGCTGGATGATGGCGAGCTGGAGTTTCTTGAAGGCCGCTGGTTAAGTATTCATGTGCGTGATATTGACCTGCAATGGTTTACCTCGGTGGTGAATGGCAAACTGGTCGTTAGCCAGAACGCGCAAGCTGATGTGAGTTTTAGTGCCGACGCCAGCGATCTGCTGATGATTGCGGCGCGTAAACAAGATCCGGATACGCTCTTCTTCCAGCGTCGGCTGGTGATTGAAGGCGATACGGAGCTGGGGCTGTATGTGAAAAACCTGATGGACGCCATTGAACTGGAGCAAATGCCGAAAGCCTTACGCATGATGCTGCTGCAACTGGCGGATTTTGTTGAGGCGGGAATGAAAACCGCGCCTGAAACCAAACAGACATCGGTAGGTGAACCATGCTAA", + "dna_sequence_length": 525, + "functions": [ + "SCP-2 sterol transfer family protein" + ], + "id": "CDS_3103", + "location": [ + [ + "NC_000913", + 3301276, + "-", + 525 + ] + ], + "md5": "3ac522c6bd5e9542ce6d5cb0eaa7a154", + "parent_gene": "", + "protein_md5": "bdc871d35f047f4d5a492616cdd0619b", + "protein_translation": "MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC", + "protein_translation_length": 174, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010380" + ], + [ + "gene_synonym", + "ECK3146" + ], + [ + "gene_synonym", + "EcoGene:EG12790" + ], + [ + "gene_synonym", + "GI:16131050" + ], + [ + "gene_synonym", + "GeneID:949115" + ], + [ + "gene_synonym", + "JW3127" + ], + [ + "gene_synonym", + "NP_417627.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45527" + ], + [ + "gene_synonym", + "b3158" + ], + [ + "gene_synonym", + "yhbU" + ] + ], + "dna_sequence": "ATGGAGCTGCTCTGCCCTGCCGGAAATCTCCCGGCGCTTAAGGCGGCCATCGAAAACGGCGCAGATGCTGTTTATATCGGGCTAAAAGATGATACCAATGCCCGTCACTTCGCCGGCCTTAACTTTACCGAGAAAAAATTGCAGGAAGCGGTGAGTTTTGTCCATCAACATCGCCGCAAACTTCACATCGCGATTAACACTTTTGCGCATCCGGACGGTTACGCCCGTTGGCAGCGCGCCGTGGATATGGCGGCGCAGCTGGGTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAAACAACTGGCACGGGTCACACCTGTACCACTGGAAGTCTTTGCTTTCGGCAGCCTGTGCATTATGTCGGAAGGTCGTTGCTATCTGTCGTCGTATCTGACGGGTGAGTCGCCCAACACCATAGGCGCGTGTTCTCCGGCCCGTTTCGTGCGCTGGCAACAAACGCCGCAGGGGCTGGAATCCCGCCTGAACGAAGTGCTGATCGACCGTTATCAGGACGGCGAAAACGCAGGTTATCCGACGCTATGTAAAGGGCGTTATCTGGTGGACGGCGAGCGCTATCACGCGCTGGAAGAACCAACCAGTCTCAATACCCTGGAACTGCTGCCGGAGTTAATGGCGGCGAATATTGCTTCGGTGAAAATTGAAGGCCGCCAGCGTAGCCCGGCGTATGTCAGCCAGGTGGCGAAAGTCTGGCGTCAGGCTATCGACCGTTGTAAGGCCGATCCGCAAAACTTTGTACCGCAAAGCGCGTGGATGGAGACGCTCGGGTCGATGTCCGAAGGCACGCAAACCACTCTTGGCGCATATCACCGTAAATGGCAGTGA", + "dna_sequence_length": 996, + "functions": [ + "U32 peptidase family protein" + ], + "id": "CDS_3104", + "location": [ + [ + "NC_000913", + 3301485, + "+", + 996 + ] + ], + "md5": "23174741634b406f429f1515aba8f17d", + "parent_gene": "", + "protein_md5": "30844d0ca2d145cc22b6da2c023ad8fc", + "protein_translation": "MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010382" + ], + [ + "gene_synonym", + "ECK3147" + ], + [ + "gene_synonym", + "EcoGene:EG12791" + ], + [ + "gene_synonym", + "GI:90111549" + ], + [ + "gene_synonym", + "GeneID:949117" + ], + [ + "gene_synonym", + "JW5530" + ], + [ + "gene_synonym", + "NP_417628.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45475" + ], + [ + "gene_synonym", + "b3159" + ], + [ + "gene_synonym", + "yhbV" + ] + ], + "dna_sequence": "ATGAAATATTCCTTAGGGCCAGTGCTGTGGTACTGGCCAAAAGAGACGCTGGAAGAATTTTATCAGCAGGCCGCCACCAGCAGCGCCGACGTGATTTATCTTGGTGAAGCGGTATGCAGCAAGCGTCGGGCAACCAAAGTTGGCGACTGGCTGGAGATGGCAAAATCGCTCGCCGGGAGTGGTAAGCAGATTGTGCTCTCCACGCTGGCGCTGGTGCAGGCATCATCTGAACTGGGCGAACTGAAACGCTATGTTGAGAACGGTGAGTTTCTGATTGAAGCCAGCGATCTCGGCGTGGTGAATATGTGCGCTGAACGCAAACTGCCGTTCGTCGCCGGGCACGCGCTGAACTGCTACAACGCGGTGACACTGAAAATATTGCTCAAACAGGGCATGATGCGCTGGTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCTGCATTAAGTATCCGAACGGGCGCAACGTGCTGTCGCAGGAAAACCAACAAGTGTTTGTACTCAATGGCATTCAGACCATGAGCGGCTACGTTTACAACCTCGGTAACGAGCTGGCATCCATGCAGGGCCTGGTTGATGTGGTCCGCCTGTCACCGCAGGGTACTGACACTTTCGCGATGCTCGACGCCTTCCGCGCTAATGAAAATGGCGCTGCACCACTGCCGTTGACGGCGAACAGCGACTGTAACGGCTACTGGCGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAA", + "dna_sequence_length": 879, + "functions": [ + "U32 peptidase family protein" + ], + "id": "CDS_3105", + "location": [ + [ + "NC_000913", + 3302489, + "+", + 879 + ] + ], + "md5": "513fa61ae41ea66938b0bf083189e95a", + "parent_gene": "", + "protein_md5": "e5b7ec13fe4fb6f2d6a310f11b24c6ac", + "protein_translation": "MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010385" + ], + [ + "gene_synonym", + "ECK3148" + ], + [ + "gene_synonym", + "EcoGene:EG12792" + ], + [ + "gene_synonym", + "GI:16131052" + ], + [ + "gene_synonym", + "GeneID:947677" + ], + [ + "gene_synonym", + "JW3129" + ], + [ + "gene_synonym", + "NP_417629.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV5" + ], + [ + "gene_synonym", + "b3160" + ], + [ + "gene_synonym", + "yhbW" + ] + ], + "dna_sequence": "ATGACTGATAAAACCATTGCGTTTTCGCTACTCGATCTGGCCCCCATTCCCGAAGGTTCTTCAGCGCGAGAAGCATTCTCCCACTCTCTCGATCTCGCCCGTCTGGCTGAAAAGCGCGGCTATCATCGCTACTGGCTGGCAGAACACCACAATATGACTGGCATTGCCAGTGCTGCCACGTCGGTATTGATCGGCTATCTGGCGGCGAATACCACCACGCTGCATCTGGGGTCTGGCGGCGTGATGTTGCCTAACCACTCACCGTTGGTCATTGCAGAACAGTTCGGCACGCTTAATACACTCTATCCGGGGCGAATCGATTTGGGGCTGGGTCGTGCTCCGGGTAGTGACCAACGGACAATGATGGCGCTACGTCGTCATATGAGCGGCGATATTGATAATTTCCCCCGCGATGTGGCGGAGCTGGTGGACTGGTTTGACGCCCGCGATCCCAATCCGCATGTGCGCCCGGTACCAGGCTATGGCGAGAAAATCCCCGTGTGGTTGTTAGGCTCCAGCCTTTACAGCGCGCAACTGGCGGCGCAGCTTGGTCTGCCGTTTGCGTTTGCCTCACACTTCGCGCCGGATATGCTGTTCCAGGCGCTGCATCTTTATCGCAGCAACTTCAAACCGTCAGCACGGCTGGAAAAACCATACGCGATGGTGTGCATCAATATTATCGCCGCCGACAGCAACCGCGACGCTGAATTTCTGTTTACCTCAATGCAGCAAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAG", + "dna_sequence_length": 1008, + "functions": [ + "putative luciferase-like monooxygenase" + ], + "id": "CDS_3106", + "location": [ + [ + "NC_000913", + 3303448, + "+", + 1008 + ] + ], + "md5": "0c623cd708e778ffa482e3f2df76a8e7", + "parent_gene": "", + "protein_md5": "6547a4edb113747cab8e6e6e19a4fd73", + "protein_translation": "MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG", + "protein_translation_length": 335, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010387" + ], + [ + "gene_synonym", + "ECK3149" + ], + [ + "gene_synonym", + "EcoGene:EG10617" + ], + [ + "gene_synonym", + "GI:16131053" + ], + [ + "gene_synonym", + "GeneID:947675" + ], + [ + "gene_synonym", + "JW3130" + ], + [ + "gene_synonym", + "NP_417630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAD2" + ], + [ + "gene_synonym", + "b3161" + ], + [ + "gene_synonym", + "mtr" + ] + ], + "dna_sequence": "ATGGCAACACTAACCACCACCCAAACGTCACCGTCGCTGCTTGGCGGCGTGGTGATTATCGGCGGCACCATTATTGGCGCAGGGATGTTTTCTCTGCCAGTGGTCATGTCCGGGGCGTGGTTTTTCTGGTCAATGGCGGCGCTGATCTTTACCTGGTTCTGTATGCTGCATTCCGGCTTGATGATTCTGGAAGCTAACCTGAATTACAGAATCGGTTCGAGTTTTGACACCATCACCAAAGATTTGCTGGGCAAAGGCTGGAACGTGGTCAACGGCATTTCCATTGCCTTTGTGCTCTATATCCTGACCTATGCCTATATTTCTGCCAGTGGTTCGATTCTGCATCACACCTTCGCAGAGATGTCACTAAACGTCCCGGCACGGGCGGCGGGTTTTGGTTTTGCATTGCTGGTAGCGTTTGTGGTGTGGTTGAGCACTAAAGCCGTCAGTCGCATGACAGCGATTGTGCTGGGGGCGAAAGTCATTACCTTCTTCCTCACCTTTGGTAGCCTGCTGGGGCATGTGCAGCCTGCGACATTGTTCAACGTCGCCGAAAGCAATGCGTCTTATGCACCGTATCTGTTGATGACCCTGCCGTTCTGTCTGGCATCGTTTGGTTATCACGGTAACGTGCCAAGCCTGATGAAGTATTACGGCAAAGATCCGAAAACCATCGTGAAATGTCTGGTGTACGGTACGCTGATGGCGCTGGCGCTGTATACCATCTGGTTGCTGGCGACGATGGGTAACATCCCGCGTCCGGAGTTTATCGGTATTGCAGAGAAGGGCGGTAATATTGATGTGCTGGTACAGGCGTTAAGCGGCGTACTGAACAGCCGTAGTCTGGATCTGCTGCTGGTCGTGTTCTCAAACTTTGCGGTAGCGAGTTCGTTCCTCGGCGTAACGCTGGGTTTGTTTGACTATCTGGCAGATCTGTTTGGTTTCGACGACTCGGCTGTGGGCCGCTTGAAAACGGCATTGCTGACCTTTGCCCCGCCAGTTGTGGGGGGGCTGTTGTTCCCGAACGGATTCCTGTACGCCATTGGTTATGCTGGTTTAGCGGCTACCATCTGGGCGGCAATTGTTCCGGCGCTGTTAGCCCGTGCATCGCGTAAACGCTTTGGCAGCCCGAAATTCCGCGTCTGGGGTGGCAAGCCGATGATTGCGCTGATTCTGGTGTTTGGCGTCGGCAACGCACTGGTGCATATTTTATCGAGCTTTAATTTACTGCCGGTGTATCAGTAA", + "dna_sequence_length": 1245, + "functions": [ + "tryptophan transporter of high affinity" + ], + "id": "CDS_3107", + "location": [ + [ + "NC_000913", + 3305817, + "-", + 1245 + ] + ], + "md5": "d4163134d977166721728f20543bf6a6", + "parent_gene": "", + "protein_md5": "ed254db07239fc87bd36c45a42b89b8d", + "protein_translation": "MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAVGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMIALILVFGVGNALVHILSSFNLLPVYQ", + "protein_translation_length": 414, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010392" + ], + [ + "gene_synonym", + "ECK3150" + ], + [ + "gene_synonym", + "EcoGene:EG10215" + ], + [ + "gene_synonym", + "GI:90111550" + ], + [ + "gene_synonym", + "GeneID:947674" + ], + [ + "gene_synonym", + "JW5531" + ], + [ + "gene_synonym", + "NP_417631.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9P6" + ], + [ + "gene_synonym", + "b3162" + ], + [ + "gene_synonym", + "csdA" + ], + [ + "gene_synonym", + "deaD" + ], + [ + "gene_synonym", + "mssB" + ], + [ + "gene_synonym", + "rhlD" + ] + ], + "dna_sequence": "ATGGCTGAATTCGAAACCACTTTTGCAGATCTGGGCCTGAAGGCTCCTATCCTTGAAGCCCTTAACGATCTGGGTTACGAAAAACCATCTCCAATTCAGGCAGAGTGTATTCCACATCTGCTGAATGGCCGCGACGTTCTGGGTATGGCCCAGACGGGGAGCGGAAAAACTGCAGCATTCTCTTTACCTCTGTTGCAGAATCTTGATCCTGAGCTGAAAGCACCACAGATTCTGGTGCTGGCACCGACCCGCGAACTGGCGGTACAGGTTGCTGAAGCAATGACGGATTTCTCTAAACACATGCGCGGCGTAAATGTGGTTGCTCTGTACGGCGGCCAGCGTTATGACGTGCAATTACGCGCCCTGCGTCAGGGGCCGCAGATCGTTGTCGGTACTCCGGGCCGTCTGCTGGACCACCTGAAACGTGGCACTCTGGACCTCTCTAAACTGAGCGGTCTGGTTCTGGATGAAGCTGACGAAATGCTGCGCATGGGCTTCATCGAAGACGTTGAAACCATTATGGCGCAGATCCCGGAAGGTCATCAGACCGCTCTGTTCTCTGCAACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCTGGGGTATGCGCAAAAACGAAGCACTGGTACGTTTCCTGGAAGCGGAAGATTTTGATGCGGCGATTATCTTCGTTCGTACCAAAAACGCGACTCTGGAAGTGGCTGAAGCTCTTGAGCGTAACGGCTACAACAGCGCCGCGCTGAACGGTGACATGAACCAGGCGCTGCGTGAACAGACACTGGAACGCCTGAAAGATGGTCGTCTGGACATCCTGATTGCGACCGACGTTGCAGCCCGTGGCCTGGACGTTGAGCGTATCAGCCTGGTAGTTAACTACGATATCCCGATGGATTCTGAGTCTTACGTTCACCGTATCGGTCGTACCGGTCGTGCGGGTCGTGCTGGCCGCGCGCTGCTGTTCGTTGAGAACCGCGAGCGTCGTCTGCTGCGCAACATTGAACGTACTATGAAGCTGACTATTCCGGAAGTAGAACTGCCGAACGCAGAACTGCTAGGCAAACGCCGTCTGGAAAAATTCGCCGCTAAAGTACAGCAGCAGCTGGAAAGCAGCGATCTGGATCAATACCGCGCACTGCTGAGCAAAATTCAGCCGACTGCTGAAGGTGAAGAGCTGGATCTCGAAACTCTGGCTGCGGCACTGCTGAAAATGGCACAGGGTGAACGTACTCTGATCGTACCGCCAGATGCGCCGATGCGTCCGAAACGTGAATTCCGTGACCGTGATGACCGTGGTCCGCGCGATCGTAACGACCGTGGCCCGCGTGGTGACCGTGAAGATCGTCCGCGTCGTGAACGTCGTGATGTTGGCGATATGCAGCTGTACCGCATTGAAGTGGGCCGCGATGATGGTGTTGAAGTTCGTCATATCGTTGGTGCGATTGCTAACGAAGGCGACATCAGCAGCCGTTACATTGGTAACATCAAGCTGTTTGCTTCTCACTCCACCATCGAACTGCCGAAAGGTATGCCGGGTGAAGTGCTGCAACACTTTACGCGCACTCGCATTCTCAACAAGCCGATGAACATGCAGTTACTGGGCGATGCACAGCCGCATACTGGCGGTGAGCGTCGTGGCGGTGGTCGTGGTTTCGGTGGCGAACGTCGTGAAGGCGGTCGTAACTTCAGCGGTGAACGCCGTGAAGGTGGCCGTGGTGATGGTCGTCGTTTTAGCGGCGAACGTCGTGAAGGCCGCGCTCCGCGTCGTGATGATTCTACCGGTCGTCGTCGTTTCGGTGGTGATGCGTAA", + "dna_sequence_length": 1890, + "functions": [ + "ATP-dependent RNA helicase" + ], + "id": "CDS_3108", + "location": [ + [ + "NC_000913", + 3307860, + "-", + 1890 + ] + ], + "md5": "8ce19456c4ff8d393d6c1f334a5696b9", + "parent_gene": "", + "protein_md5": "63ab99fd94e9336d61e988e8a8953030", + "protein_translation": "MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA", + "protein_translation_length": 629, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4500" + ], + [ + "gene_synonym", + "EcoGene:EG14490" + ], + [ + "gene_synonym", + "GI:226524750" + ], + [ + "gene_synonym", + "GeneID:7751619" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P618" + ], + [ + "gene_synonym", + "YP_002791258.1" + ], + [ + "gene_synonym", + "b4685" + ], + [ + "gene_synonym", + "yrbN" + ] + ], + "dna_sequence": "ATGAAAATTGCTGATCAATTTCATGATGAGTTATGTAGACTGGCCGCCATTAATTTTGAGGCACACGTACTACATGGCTGA", + "dna_sequence_length": 81, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3109", + "location": [ + [ + "NC_000913", + 3307933, + "-", + 81 + ] + ], + "md5": "9070402bb42e54e46262b5c879c712ac", + "parent_gene": "", + "protein_md5": "c8ec2c77c6bf99c1b43150229a9fe1ad", + "protein_translation": "MKIADQFHDELCRLAAINFEAHVLHG", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010395" + ], + [ + "gene_synonym", + "ECK3151" + ], + [ + "gene_synonym", + "EcoGene:EG12371" + ], + [ + "gene_synonym", + "GI:16131055" + ], + [ + "gene_synonym", + "GeneID:947673" + ], + [ + "gene_synonym", + "JW3132" + ], + [ + "gene_synonym", + "NP_417632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB1" + ], + [ + "gene_synonym", + "b3163" + ], + [ + "gene_synonym", + "nlpI" + ], + [ + "gene_synonym", + "yhbM" + ] + ], + "dna_sequence": "ATGAAGCCTTTTTTGCGCTGGTGTTTCGTTGCGACAGCACTTACGCTTGCAGGATGCAGTAATACTTCCTGGCGTAAAAGTGAAGTCCTCGCGGTACCATTGCAACCGACTTTACAGCAGGAAGTGATTCTGGCACGTATGGAACAAATCCTTGCCAGTCGGGCTTTAACCGATGACGAACGCGCACAGCTTTTATATGAGCGCGGAGTGTTGTATGATAGTCTCGGTCTGAGGGCATTAGCGCGTAACGATTTTTCGCAAGCGCTGGCAATCCGACCGGATATGCCTGAAGTATTCAATTACTTAGGCATATATTTAACGCAGGCAGGCAATTTTGATGCTGCCTATGAAGCGTTTGATTCTGTACTTGAGCTTGATCCAACTTACAACTACGCGCACTTGAATCGCGGGATCGCATTATATTACGGCGGTCGTGACAAGTTAGCGCAAGATGATCTGCTGGCGTTTTATCAAGACGATCCCAATGATCCTTTCCGTAGTCTGTGGCTTTATCTCGCCGAGCAGAAGCTCGATGAGAAGCAGGCTAAAGAAGTGTTGAAACAGCACTTCGAAAAATCGGATAAGGAACAGTGGGGATGGAACATTGTCGAGTTCTACCTGGGCAACATTAGCGAACAAACGTTAATGGAAAGGCTCAAGGCGGACGCAACGGATAACACCTCGCTCGCTGAGCATCTCAGTGAAACCAACTTCTATTTAGGTAAGTACTACCTAAGTCTGGGGGATTTGGACAGCGCCACGGCACTGTTCAAACTGGCGGTTGCCAACAACGTTCATAACTTTGTTGAGCACCGATACGCATTGTTGGAATTATCGCTCCTGGGCCAGGACCAAGATGACCTGGCAGAATCGGACCAGCAATAG", + "dna_sequence_length": 885, + "functions": [ + "lipoprotein involved in osmotic sensitivity and filamentation" + ], + "id": "CDS_3110", + "location": [ + [ + "NC_000913", + 3308924, + "-", + 885 + ] + ], + "md5": "dcec89d966e6b4ff7ff0050a4ebe7146", + "parent_gene": "", + "protein_md5": "2ce92cf2f06fc5a6d101faab7303c360", + "protein_translation": "MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010397" + ], + [ + "gene_synonym", + "ECK3152" + ], + [ + "gene_synonym", + "EcoGene:EG10743" + ], + [ + "gene_synonym", + "GI:145698316" + ], + [ + "gene_synonym", + "GeneID:947672" + ], + [ + "gene_synonym", + "JW5851" + ], + [ + "gene_synonym", + "NP_417633.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05055" + ], + [ + "gene_synonym", + "b3164" + ], + [ + "gene_synonym", + "bfl" + ], + [ + "gene_synonym", + "pnp" + ] + ], + "dna_sequence": "TTGCTTAATCCGATCGTTCGTAAATTCCAGTACGGCCAACACACCGTGACTCTGGAAACCGGCATGATGGCTCGTCAGGCTACTGCCGCTGTTATGGTTAGCATGGATGACACCGCGGTATTCGTTACCGTTGTTGGCCAGAAAAAAGCCAAACCAGGTCAGGACTTCTTCCCACTGACCGTTAACTATCAGGAGCGTACCTACGCTGCTGGTCGTATCCCGGGTAGCTTCTTCCGTCGTGAAGGCCGCCCAAGCGAAGGCGAAACCCTGATCGCGCGTCTGATTGACCGCCCGATTCGCCCGCTGTTCCCGGAAGGCTTCGTCAACGAAGTTCAGGTTATCGCCACCGTGGTTTCTGTTAACCCGCAAGTTAACCCGGATATCGTCGCGATGATTGGTGCTTCCGCAGCGCTGTCTCTGTCTGGTATTCCGTTCAATGGCCCGATTGGTGCTGCCCGCGTAGGTTACATCAATGACCAGTACGTACTGAACCCGACTCAGGACGAGCTGAAAGAGAGCAAACTGGATCTGGTTGTTGCCGGTACTGAAGCCGCTGTACTGATGGTTGAATCTGAAGCTCAACTGCTGAGCGAAGACCAGATGCTGGGCGCAGTAGTGTTCGGTCATGAACAACAGCAGGTTGTTATTCAGAACATCAATGAACTGGTGAAAGAAGCCGGTAAACCGCGTTGGGACTGGCAGCCGGAGCCGGTAAACGAAGCGCTAAACGCGCGCGTTGCTGCACTGGCTGAAGCTCGCCTGAGCGATGCTTACCGCATCACCGACAAACAAGAGCGTTATGCGCAGGTTGATGTCATCAAATCTGAAACCATCGCGACGCTGCTTGCTGAAGACGAAACCCTGGACGAAAACGAACTGGGTGAAATTCTGCACGCGATCGAGAAAAACGTTGTTCGTAGCCGCGTACTGGCAGGCGAACCGCGTATCGACGGTCGTGAAAAAGATATGATCCGTGGTCTGGATGTGCGTACTGGCGTGCTGCCGCGTACTCACGGTTCTGCGCTGTTCACCCGTGGTGAAACGCAGGCGCTGGTTACCGCAACGCTGGGTACTGCTCGTGACGCGCAGGTTCTTGATGAACTGATGGGCGAACGTACCGATACCTTCCTGTTCCACTACAACTTCCCTCCGTACTCCGTAGGCGAAACCGGCATGGTCGGTTCTCCGAAGCGTCGTGAAATTGGTCACGGTCGTCTGGCGAAGCGCGGCGTGCTGGCAGTCATGCCGGATATGGACAAATTCCCGTACACCGTACGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTGTGCGGCGCGTCTCTGGCGCTGATGGACGCAGGTGTGCCGATCAAAGCTGCCGTTGCGGGTATCGCAATGGGTCTGGTGAAAGAAGGCGACAACTACGTTGTACTGTCTGACATTTTGGGCGACGAAGATCACCTGGGCGATATGGACTTCAAAGTTGCAGGTTCCCGCGACGGTATCTCTGCACTGCAGATGGATATCAAAATTGAAGGTATCACCAAAGAGATCATGCAGGTTGCGCTGAACCAGGCTAAAGGTGCGCGTCTGCATATCCTGGGCGTAATGGAACAGGCGATCAACGCGCCGCGTGGCGATATCTCTGAGTTCGCACCGCGTATCCATACCATCAAGATCAACCCGGACAAGATCAAAGATGTTATCGGTAAAGGCGGTTCTGTAATCCGTGCTCTGACCGAAGAAACTGGCACCACCATCGAAATCGAAGATGACGGTACTGTGAAGATTGCAGCGACCGACGGCGAGAAAGCGAAACATGCTATTCGTCGTATCGAAGAGATCACTGCAGAAATCGAAGTGGGCCGCGTCTACACTGGTAAAGTGACCCGTATCGTTGACTTTGGCGCATTTGTTGCCATCGGCGGCGGTAAAGAAGGTCTGGTCCACATCTCTCAAATCGCTGACAAACGCGTTGAGAAAGTGACCGATTACCTGCAGATGGGTCAGGAAGTACCGGTGAAAGTTCTGGAAGTTGATCGCCAGGGCCGTATCCGTCTGAGCATTAAAGAAGCGACTGAGCAGTCTCAACCTGCTGCAGCACCGGAAGCTCCGGCTGCTGAACAGGGCGAGTAA", + "dna_sequence_length": 2136, + "functions": [ + "polynucleotide phosphorylase/polyadenylase" + ], + "id": "CDS_3111", + "location": [ + [ + "NC_000913", + 3311168, + "-", + 2136 + ] + ], + "md5": "8f579845760a991ca9898f4280e192e6", + "parent_gene": "", + "protein_md5": "82023d760233f9ac07264b5f659b2e18", + "protein_translation": "MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE", + "protein_translation_length": 711, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010401" + ], + [ + "gene_synonym", + "ECK3154" + ], + [ + "gene_synonym", + "EcoGene:EG10914" + ], + [ + "gene_synonym", + "GI:16131057" + ], + [ + "gene_synonym", + "GeneID:947686" + ], + [ + "gene_synonym", + "JW3134" + ], + [ + "gene_synonym", + "NP_417634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADZ4" + ], + [ + "gene_synonym", + "b3165" + ], + [ + "gene_synonym", + "rpsO" + ], + [ + "gene_synonym", + "secC" + ] + ], + "dna_sequence": "ATGTCTCTAAGTACTGAAGCAACAGCTAAAATCGTTTCTGAGTTTGGTCGTGACGCAAACGACACCGGTTCTACCGAAGTTCAGGTAGCACTGCTGACTGCACAGATCAACCACCTGCAGGGCCACTTTGCAGAGCACAAAAAAGATCACCACAGCCGTCGTGGTCTGCTGCGCATGGTTTCTCAGCGTCGTAAACTGCTCGACTACCTGAAACGTAAAGACGTAGCACGTTACACCCAGCTCATCGAGCGCCTGGGTCTGCGTCGCTAA", + "dna_sequence_length": 270, + "functions": [ + "30S ribosomal subunit protein S15" + ], + "id": "CDS_3112", + "location": [ + [ + "NC_000913", + 3311684, + "-", + 270 + ] + ], + "md5": "a8e3b9c7ace2e3d4fbb261d2fcbbfd9b", + "parent_gene": "", + "protein_md5": "85d82584bc67014d3c63ee6ceabd5751", + "protein_translation": "MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010404" + ], + [ + "gene_synonym", + "ECK3155" + ], + [ + "gene_synonym", + "EcoGene:EG11177" + ], + [ + "gene_synonym", + "GI:16131058" + ], + [ + "gene_synonym", + "GeneID:947687" + ], + [ + "gene_synonym", + "JW3135" + ], + [ + "gene_synonym", + "NP_417635.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60340" + ], + [ + "gene_synonym", + "b3166" + ], + [ + "gene_synonym", + "truB" + ], + [ + "gene_synonym", + "yhbA" + ] + ], + "dna_sequence": "ATGAGTCGTCCTCGTCGTCGCGGTCGCGACATTAACGGCGTTTTGTTGCTGGATAAACCTCAGGGTATGTCCAGCAACGATGCGCTGCAAAAAGTGAAACGTATATATAACGCCAACCGTGCCGGGCATACCGGTGCGCTGGACCCGCTGGCGACCGGCATGTTGCCGATTTGCCTCGGGGAAGCGACGAAGTTTTCCCAGTATCTGCTGGACTCCGACAAACGCTATCGGGTCATTGCGCGTCTTGGACAGCGTACCGATACTTCTGATGCCGACGGACAGATCGTTGAAGAACGTCCGGTAACCTTTAGCGCAGAGCAGCTGGCAGCGGCACTGGATACTTTCCGTGGCGATATCGAACAGATCCCTTCGATGTATTCAGCACTGAAATATCAGGGCAAAAAACTGTACGAATATGCGCGTCAGGGCATTGAAGTTCCGCGTGAAGCGCGTCCGATTACCGTTTATGAATTGCTGTTTATTCGCCATGAAGGCAATGAGCTGGAGCTGGAAATTCACTGCTCAAAAGGCACTTATATCCGCACCATCATTGATGACCTGGGTGAAAAACTCGGCTGTGGCGCGCATGTTATTTACCTGCGCCGTCTGGCGGTAAGTAAATATCCGGTTGAACGGATGGTGACCCTGGAGCACCTGCGTGAACTTGTTGAGCAAGCTGAACAGCAGGATATTCCAGCCGCGGAGTTACTTGATCCATTACTGATGCCAATGGACAGTCCAGCTTCGGACTATCCGGTGGTGAATCTTCCGTTAACGTCTTCTGTTTACTTCAAAAATGGTAACCCGGTTCGTACATCTGGTGCGCCACTGGAAGGACTGGTTCGCGTCACGGAAGGTGAGAACGGCAAATTTATCGGTATGGGCGAAATTGACGATGAAGGCCGCGTTGCGCCTCGTCGCCTGGTGGTTGAATACCCGGCGTAA", + "dna_sequence_length": 945, + "functions": [ + "tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase" + ], + "id": "CDS_3113", + "location": [ + [ + "NC_000913", + 3312777, + "-", + 945 + ] + ], + "md5": "c5eb8d0ed7feb28f325a3f198ab653df", + "parent_gene": "", + "protein_md5": "a877afa6369bea0714b17ebf98c3e804", + "protein_translation": "MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010406" + ], + [ + "gene_synonym", + "ECK3156" + ], + [ + "gene_synonym", + "EcoGene:EG11178" + ], + [ + "gene_synonym", + "GI:16131059" + ], + [ + "gene_synonym", + "GeneID:947685" + ], + [ + "gene_synonym", + "JW3136" + ], + [ + "gene_synonym", + "NP_417636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7G2" + ], + [ + "gene_synonym", + "b3167" + ], + [ + "gene_synonym", + "rbfA" + ], + [ + "gene_synonym", + "sdr-43" + ], + [ + "gene_synonym", + "yhbB" + ] + ], + "dna_sequence": "ATGGCGAAAGAATTTGGTCGCCCGCAGCGCGTAGCGCAGGAAATGCAAAAAGAGATCGCTCTCATCCTGCAGCGTGAAATTAAAGATCCTCGCCTGGGCATGATGACCACCGTTTCCGGTGTCGAAATGTCTCGCGACCTGGCGTATGCCAAAGTATATGTGACGTTCCTCAACGACAAAGATGAAGACGCGGTTAAAGCGGGCATCAAAGCGTTGCAAGAAGCTTCTGGTTTCATCCGCAGCCTGCTGGGGAAAGCGATGCGCCTGCGTATCGTGCCGGAACTGACCTTCTTCTACGACAACTCTCTGGTTGAAGGGATGCGCATGTCAAACCTGGTGACCAGCGTGGTCAAACATGACGAAGAACGTCGTGTTAACCCGGACGACAGCAAGGAGGACTAA", + "dna_sequence_length": 402, + "functions": [ + "30s ribosome binding factor" + ], + "id": "CDS_3114", + "location": [ + [ + "NC_000913", + 3313178, + "-", + 402 + ] + ], + "md5": "ad6a56f02b3e0232703247a97744e487", + "parent_gene": "", + "protein_md5": "3bd4474276d81e34a5f41940e5023c8f", + "protein_translation": "MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010410" + ], + [ + "gene_synonym", + "ECK3157" + ], + [ + "gene_synonym", + "EcoGene:EG10505" + ], + [ + "gene_synonym", + "GI:16131060" + ], + [ + "gene_synonym", + "GeneID:947684" + ], + [ + "gene_synonym", + "JW3137" + ], + [ + "gene_synonym", + "NP_417637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A705" + ], + [ + "gene_synonym", + "b3168" + ], + [ + "gene_synonym", + "gicD" + ], + [ + "gene_synonym", + "infB" + ], + [ + "gene_synonym", + "ssyG" + ] + ], + "dna_sequence": "ATGACAGATGTAACGATTAAAACGCTGGCCGCAGAGCGACAGACCTCCGTGGAACGCCTGGTACAGCAATTTGCTGATGCAGGTATCCGGAAGTCTGCTGACGACTCTGTGTCTGCACAAGAGAAACAGACTTTGATTGACCACCTGAATCAGAAAAATTCAGGCCCGGACAAATTGACGCTGCAACGTAAAACACGCAGCACCCTTAACATTCCTGGTACCGGTGGAAAAAGCAAATCGGTACAAATCGAAGTCCGCAAGAAACGCACCTTTGTGAAACGCGATCCGCAAGAGGCTGAACGCCTTGCAGCGGAAGAGCAAGCGCAGCGTGAAGCGGAAGAGCAAGCCCGTCGTGAGGCAGAAGAATCGGCTAAACGCGAGGCGCAACAAAAAGCTGAACGTGAGGCCGCAGAACAAGCTAAGCGTGAAGCTGCTGAACAAGCGAAACGTGAAGCTGCGGAAAAAGACAAAGTGAGCAATCAACAAGACGATATGACTAAAAACGCCCAGGCTGAAAAAGCCCGCCGTGAGCAGGAAGCTGCAGAGCTCAAGCGTAAAGCTGAAGAAGAAGCGCGTCGTAAACTCGAAGAAGAAGCACGTCGCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTCCAGCGATTATCACGTCACTACTTCTCAACATGCTCGCCAGGCAGAAGACGAAAGCGATCGTGAAGTCGAAGGCGGCCGTGGCCGTGGTCGTAACGCGAAAGCAGCGCGTCCGAAGAAAGGCAACAAACACGCTGAATCAAAAGCTGATCGTGAAGAAGCACGCGCAGCAGTACGTGGCGGTAAAGGCGGAAAACGTAAAGGTTCTTCGCTGCAGCAAGGCTTCCAGAAGCCTGCTCAGGCCGTTAACCGTGACGTTGTGATCGGCGAAACTATCACCGTTGGCGAACTGGCGAACAAGATGGCGGTTAAAGGCTCTCAGGTCATCAAAGCGATGATGAAACTGGGCGCAATGGCAACCATCAACCAGGTTATCGATCAGGAAACCGCACAGCTGGTTGCTGAAGAGATGGGCCATAAAGTTATCCTGCGTCGTGAAAACGAGCTGGAAGAGGCGGTAATGAGCGACCGTGACACGGGTGCTGCGGCTGAACCGCGCGCGCCGGTTGTGACCATCATGGGTCACGTTGACCACGGTAAAACCTCTCTGCTGGACTACATTCGTTCAACGAAAGTGGCCTCTGGCGAAGCGGGCGGCATTACCCAGCACATTGGTGCATACCACGTTGAAACTGAAAACGGCATGATCACCTTCCTGGACACCCCGGGGCACGCCGCGTTTACTTCAATGCGTGCTCGTGGTGCGCAGGCAACGGACATCGTAGTCCTGGTTGTTGCTGCCGACGACGGTGTGATGCCGCAGACCATCGAAGCAATCCAGCACGCGAAAGCGGCGCAGGTACCGGTGGTGGTTGCAGTGAACAAGATCGATAAACCAGAAGCTGATCCGGATCGCGTTAAGAACGAACTCTCCCAGTACGGCATCCTGCCGGAAGAGTGGGGCGGTGAAAGCCAGTTCGTACACGTATCTGCGAAAGCGGGTACCGGTATCGATGAACTGCTGGACGCTATCCTGCTGCAGGCGGAAGTTCTGGAGCTGAAAGCGGTACGTAAAGGTATGGCGAGCGGTGCGGTTATCGAATCCTTCCTCGATAAAGGTCGTGGTCCGGTTGCTACCGTTCTGGTACGTGAAGGTACTCTGCACAAGGGCGATATCGTTCTGTGTGGCTTCGAATACGGTCGTGTTCGTGCGATGCGTAACGAACTGGGTCAGGAAGTGCTGGAAGCGGGTCCGTCCATTCCGGTGGAAATCCTCGGCCTGTCCGGCGTACCGGCTGCGGGTGATGAAGTTACCGTTGTACGTGACGAGAAGAAAGCGCGTGAAGTTGCACTCTATCGTCAGGGTAAATTCCGCGAAGTTAAACTGGCGCGTCAGCAGAAATCTAAACTCGAGAACATGTTCGCCAACATGACCGAAGGCGAAGTTCACGAAGTGAATATCGTCCTGAAGGCAGACGTACAGGGTTCTGTCGAAGCGATCTCCGACTCCTTGCTGAAACTGTCTACTGACGAAGTTAAAGTGAAGATCATCGGTTCTGGCGTAGGTGGTATCACCGAAACCGACGCCACCCTGGCTGCGGCGTCCAACGCCATCCTGGTTGGCTTTAACGTACGTGCTGATGCCTCTGCACGTAAAGTGATTGAAGCGGAAAGCCTGGATCTGCGTTACTACTCCGTCATCTATAACCTGATTGACGAAGTGAAAGCGGCGATGAGCGGTATGCTGTCTCCGGAACTGAAACAGCAGATTATCGGTCTGGCGGAAGTTCGTGACGTGTTCAAATCGCCGAAATTTGGTGCCATCGCAGGCTGTATGGTTACCGAAGGTGTGGTTAAACGTCACAACCCGATCCGCGTTCTGCGTGACAACGTGGTTATCTACGAAGGCGAGCTGGAGTCCCTGCGCCGCTTCAAAGATGACGTTAACGAAGTCCGTAACGGTATGGAATGTGGTATCGGCGTTAAGAACTACAACGACGTCCGCACTGGCGATGTGATCGAAGTATTCGAAATCATCGAGATCCAACGTACCATTGCTTAA", + "dna_sequence_length": 2673, + "functions": [ + "translation initiation factor IF-2" + ], + "id": "CDS_3115", + "location": [ + [ + "NC_000913", + 3316014, + "-", + 2673 + ] + ], + "md5": "5532978c0f8641e5ca4aa1e7e1e1ed0a", + "parent_gene": "", + "protein_md5": "bf16af9c81402c4ccf167b4d9487a2d0", + "protein_translation": "MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010413" + ], + [ + "gene_synonym", + "ECK3158" + ], + [ + "gene_synonym", + "EcoGene:EG10665" + ], + [ + "gene_synonym", + "GI:16131061" + ], + [ + "gene_synonym", + "GeneID:947682" + ], + [ + "gene_synonym", + "JW3138" + ], + [ + "gene_synonym", + "NP_417638.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF6" + ], + [ + "gene_synonym", + "b3169" + ], + [ + "gene_synonym", + "nusA" + ] + ], + "dna_sequence": "ATGAACAAAGAAATTTTGGCTGTAGTTGAAGCCGTATCCAATGAAAAGGCGCTACCTCGCGAGAAGATTTTCGAAGCATTGGAAAGCGCGCTGGCGACAGCAACAAAGAAAAAATATGAACAAGAGATCGACGTCCGCGTACAGATCGATCGCAAAAGCGGTGATTTTGACACTTTCCGTCGCTGGTTAGTTGTTGATGAAGTCACCCAGCCGACCAAGGAAATCACCCTTGAAGCCGCACGTTATGAAGATGAAAGCCTGAACCTGGGCGATTACGTTGAAGATCAGATTGAGTCTGTTACCTTTGACCGTATCACTACCCAGACGGCAAAACAGGTTATCGTGCAGAAAGTGCGTGAAGCCGAACGTGCGATGGTGGTTGATCAGTTCCGTGAACACGAAGGTGAAATCATCACCGGCGTGGTGAAAAAAGTAAACCGCGACAACATCTCTCTGGATCTGGGCAACAACGCTGAAGCCGTGATCCTGCGCGAAGATATGCTGCCGCGTGAAAACTTCCGCCCTGGCGACCGCGTTCGTGGCGTGCTCTATTCCGTTCGCCCGGAAGCGCGTGGCGCGCAACTGTTCGTCACTCGTTCCAAGCCGGAAATGCTGATCGAACTGTTCCGTATTGAAGTGCCAGAAATCGGCGAAGAAGTGATTGAAATTAAAGCAGCGGCTCGCGATCCGGGTTCTCGTGCGAAAATCGCGGTGAAAACCAACGATAAACGTATCGATCCGGTAGGTGCTTGCGTAGGTATGCGTGGCGCGCGTGTTCAGGCGGTGTCTACTGAACTGGGTGGCGAGCGTATCGATATCGTCCTGTGGGATGATAACCCGGCGCAGTTCGTGATTAACGCAATGGCACCGGCAGACGTTGCTTCTATCGTGGTGGATGAAGATAAACACACCATGGATATCGCCGTTGAAGCCGGTAACCTGGCGCAGGCGATTGGCCGTAACGGTCAGAACGTGCGTCTGGCTTCGCAGCTGAGCGGTTGGGAACTCAACGTGATGACCGTTGACGACCTGCAGGCTAAGCATCAGGCGGAAGCGCACGCAGCGATCGACACCTTCACCAAATATCTCGACATCGACGAAGACTTCGCGACTGTTCTGGTAGAAGAAGGCTTCTCGACGCTGGAAGAATTGGCCTATGTGCCGATGAAAGAGCTGTTGGAAATCGAAGGCCTTGATGAGCCGACCGTTGAAGCACTGCGCGAGCGTGCTAAAAATGCACTGGCCACCATTGCACAGGCCCAGGAAGAAAGCCTCGGTGATAACAAACCGGCTGACGATCTGCTGAACCTTGAAGGGGTAGATCGTGATTTGGCATTCAAACTGGCCGCCCGTGGCGTTTGTACGCTGGAAGATCTCGCCGAACAGGGCATTGATGATCTGGCTGATATCGAAGGGTTGACCGACGAAAAAGCCGGAGCACTGATTATGGCTGCCCGTAATATTTGCTGGTTCGGTGACGAAGCGTAA", + "dna_sequence_length": 1488, + "functions": [ + "transcription termination/antitermination L factor" + ], + "id": "CDS_3116", + "location": [ + [ + "NC_000913", + 3317526, + "-", + 1488 + ] + ], + "md5": "d230d03b06b585bd80f0ae69dd3f90f8", + "parent_gene": "", + "protein_md5": "3e03ed8d35ddb858f919fa9b04e5a497", + "protein_translation": "MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA", + "protein_translation_length": 495, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010417" + ], + [ + "gene_synonym", + "ECK3159" + ], + [ + "gene_synonym", + "EcoGene:EG11179" + ], + [ + "gene_synonym", + "GI:226524751" + ], + [ + "gene_synonym", + "GeneID:947680" + ], + [ + "gene_synonym", + "JW5533" + ], + [ + "gene_synonym", + "NP_417639.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A8" + ], + [ + "gene_synonym", + "b3170" + ], + [ + "gene_synonym", + "rimP" + ], + [ + "gene_synonym", + "yhbC" + ] + ], + "dna_sequence": "TTGTCCACATTAGAGCAAAAATTAACAGAGATGATTACTGCGCCAGTTGAGGCCCTGGGTTTTGAACTGGTTGGCATCGAATTTATTCGCGGTCGCACATCCACACTGCGCATCTATATTGATAGTGAAGATGGCATCAATGTTGATGATTGTGCTGATGTGAGCCACCAGGTAAGTGCTGTGCTGGATGTTGAAGATCCCATCACCGTTGCTTATAACCTGGAAGTCTCCTCACCGGGTCTCGATCGCCCACTGTTCACGGCTGAACACTACGCCCGTTTTGTCGGAGAAGAGGTGACTCTGGTTCTCCGTATGGCGGTACAAAACCGTCGTAAATGGCAGGGCGTTATCAAAGCGGTAGACGGTGAAATGATCACAGTTACCGTCGAAGGTAAAGATGAAGTGTTCGCGCTGAGTAATATCCAGAAGGCGAACCTGGTTCCCCACTTTTAA", + "dna_sequence_length": 453, + "functions": [ + "ribosome maturation factor for 30S subunits" + ], + "id": "CDS_3117", + "location": [ + [ + "NC_000913", + 3318006, + "-", + 453 + ] + ], + "md5": "7a8bb91b82285bc3b9ad3bd784e03399", + "parent_gene": "", + "protein_md5": "e5fe4d5ca622d49d8545d7262eedb937", + "protein_translation": "MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010428" + ], + [ + "gene_synonym", + "Arg6" + ], + [ + "gene_synonym", + "ECK3161" + ], + [ + "gene_synonym", + "EcoGene:EG10068" + ], + [ + "gene_synonym", + "GI:16131063" + ], + [ + "gene_synonym", + "GeneID:947590" + ], + [ + "gene_synonym", + "JW3140" + ], + [ + "gene_synonym", + "NP_417640.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6E4" + ], + [ + "gene_synonym", + "argE" + ], + [ + "gene_synonym", + "argG" + ], + [ + "gene_synonym", + "b3172" + ] + ], + "dna_sequence": "ATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAACCGTGGCTTGATACTGACTTTATTGATGAACTGGGCGGCCGTCATGAGATGTCTGAATTTATGATTGCCTGCGGTTTCGACTACAAAATGTCTGTCGAAAAAGCCTACTCCACAGACTCCAACATGCTTGGTGCAACGCATGAAGCGAAGGATCTGGAATACCTCAACTCCAGCGTCAAAATCGTCAACCCGATTATGGGCGTGAAATTCTGGGATGAGAGCGTGAAGATCCCGGCAGAAGAAGTCACAGTACGCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGTCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAA", + "dna_sequence_length": 1344, + "functions": [ + "argininosuccinate synthetase" + ], + "id": "CDS_3118", + "location": [ + [ + "NC_000913", + 3318637, + "+", + 1344 + ] + ], + "md5": "5246c585071addcefe9c267a448f4846", + "parent_gene": "", + "protein_md5": "a14eee6a28425349b6d6e22e2d36112d", + "protein_translation": "MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSAASGVPQVENLENKGQ", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010430" + ], + [ + "gene_synonym", + "ECK3162" + ], + [ + "gene_synonym", + "EcoGene:EG12793" + ], + [ + "gene_synonym", + "GI:90111552" + ], + [ + "gene_synonym", + "GeneID:947711" + ], + [ + "gene_synonym", + "JW5534" + ], + [ + "gene_synonym", + "NP_417641.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42640" + ], + [ + "gene_synonym", + "b3173" + ], + [ + "gene_synonym", + "yhbX" + ] + ], + "dna_sequence": "ATGACAGTATTCAACAAATTTGCTAGAACTTTTAAATCTCATTGGTTGTTGTATCTTTGTGTTATTGTTTTTGGTATTACGAACTTAGTCGCTTCTTCCGGAGCGCATATGGTTCAGCGCTTGCTGTTCTTCGTTCTGACCATCCTGGTTGTAAAACGTATATCATCCCTTCCGCTTCGCCTGCTTGTTGCCGCACCATTTGTGTTACTGACTGCGGCAGACATGAGTATTAGCCTCTATTCATGGTGTACCTTTGGTACAACTTTCAATGATGGATTTGCGATTAGTGTGCTCCAGAGTGATCCGGATGAAGTTGTCAAAATGCTGGGGATGTATATCCCTTATCTATGTGCCTTTGCTTTTTTATCCCTTCTTTTTTTGGCAGTAATAATAAAATATGATGTTTCCTTGCCGACAAAAAAAGTGACAGGAATATTATTGCTGATTGTCATTTCGGGCAGTTTATTTTCCGCTTGTCAATTTGCTTATAAAGATGCAAAAAATAAAAAAGCGTTCAGTCCATATATACTAGCGTCGCGATTTGCTACCTATACGCCGTTTTTCAATCTCAACTATTTTGCTTTAGCAGCGAAAGAGCATCAAAGATTACTCTCAATTGCAAACACGGTGCCGTATTTTCAATTATCAGTCAGGGATACAGGTATTGATACCTACGTGTTGATTGTGGGGGAGTCTGTACGTGTCGACAATATGTCTTTGTATGGATATACACGCTCTACGACACCGCAAGTTGAAGCACAAAGAAAACAGATCAAACTGTTTAATCAAGCAATAAGCGGCGCACCTTACACTGCGCTGTCGGTTCCCCTTTCTTTAACTGCTGATTCTGTTTTGAGTCATGACATTCATAATTACCCCGACAACATTATTAATATGGCTAATCAAGCAGGATTTCAGACTTTCTGGCTAAGCTCGCAATCCGCTTTTCGGCAGAATGGTACAGCAGTTACCAGTATCGCCATGCGCGCCATGGAAACAGTTTATGTCAGAGGATTTGATGAATTGTTGTTGCCGCATTTATCGCAAGCATTACAGCAAAATACGCAGCAAAAGAAACTGATTGTTCTTCATTTAAATGGAAGCCATGAACCGGCTTGTAGCGCCTATCCGCAATCCAGCGCCGTGTTTCAACCGCAGGACGATCAGGATGCCTGCTATGACAACTCCATTCATTACACAGATAGTTTGCTAGGTCAGGTTTTTGAATTATTAAAAGATCGCCGCGCCTCGGTCATGTATTTTGCCGACCACGGCCTGGAACGTGACCCTACGAAGAAGAACGTCTATTTTCATGGAGGCAGGGAGGCTAGCCAGCAGGCATATCATGTCCCGATGTTTATCTGGTATAGCCCCGTTCTTGGGGATGGCGTGGATCGCACAACGGAAAACAACATCTTTTCGACAGCTTACAATAATTACCTTATTAATGCGTGGATGGGGGTAACAAAGCCGGAACAGCCGCAAACGCTTGAGGAAGTGATTGCACACTATAAAGGAGACTCACGGGTTGTGGATGCAAACCATGATGTTTTCGATTATGTGATGCTCAGAAAGGAGTTTACAGAGGATAAGCAAGGTAACCCCACCCCTGAAGGGCAGGGTTGA", + "dna_sequence_length": 1626, + "functions": [ + "putative EptAB family phosphoethanolamine transferase, inner membrane protein" + ], + "id": "CDS_3119", + "location": [ + [ + "NC_000913", + 3321613, + "-", + 1626 + ] + ], + "md5": "c7f44e04208957dc03e967b5abe0a091", + "parent_gene": "", + "protein_md5": "4e77b0e09b19dc2f23a44de1f80f2dfa", + "protein_translation": "MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG", + "protein_translation_length": 541, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010436" + ], + [ + "gene_synonym", + "ECK3164" + ], + [ + "gene_synonym", + "EcoGene:EG12095" + ], + [ + "gene_synonym", + "GI:16131065" + ], + [ + "gene_synonym", + "GeneID:947720" + ], + [ + "gene_synonym", + "JW3142" + ], + [ + "gene_synonym", + "NP_417642.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG99" + ], + [ + "gene_synonym", + "b3175" + ], + [ + "gene_synonym", + "prlH" + ], + [ + "gene_synonym", + "secG" + ] + ], + "dna_sequence": "ATGTATGAAGCTCTTTTAGTAGTTTTCCTTATTGTGGCAATTGGCCTTGTTGGTCTGATCATGCTGCAGCAAGGTAAAGGCGCTGATATGGGAGCCTCCTTCGGAGCAGGCGCTTCCGCTACGCTGTTTGGTTCAAGTGGTTCTGGTAACTTCATGACCCGCATGACGGCGCTGCTGGCAACGTTATTCTTCATCATCAGTCTGGTGCTGGGTAACATCAATAGCAACAAAACCAATAAAGGTAGCGAATGGGAAAATCTGAGTGCACCGGCGAAAACCGAACAAACTCAGCCAGCTGCTCCGGCTAAGCCGACCAGCGATATCCCGAACTAA", + "dna_sequence_length": 333, + "functions": [ + "preprotein translocase membrane subunit" + ], + "id": "CDS_3120", + "location": [ + [ + "NC_000913", + 3322505, + "-", + 333 + ] + ], + "md5": "a9ecc1d4e5c3039bb43ce0935a9dfa90", + "parent_gene": "", + "protein_md5": "c9d64c9174aefb2a599ee9a9f81fde03", + "protein_translation": "MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010439" + ], + [ + "gene_synonym", + "ECK3165" + ], + [ + "gene_synonym", + "EcoGene:EG11553" + ], + [ + "gene_synonym", + "GI:16131066" + ], + [ + "gene_synonym", + "GeneID:947692" + ], + [ + "gene_synonym", + "JW3143" + ], + [ + "gene_synonym", + "NP_417643.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31120" + ], + [ + "gene_synonym", + "b3176" + ], + [ + "gene_synonym", + "glmM" + ], + [ + "gene_synonym", + "mrsA" + ], + [ + "gene_synonym", + "yhbF" + ] + ], + "dna_sequence": "ATGAGTAATCGTAAATATTTCGGTACCGATGGGATTCGTGGTCGTGTAGGGGATGCGCCGATCACACCTGATTTTGTGCTTAAGCTGGGTTGGGCCGCGGGTAAAGTGCTGGCGCGCCACGGCTCCCGTAAGATTATTATTGGTAAAGACACGCGTATTTCTGGCTATATGCTGGAGTCAGCACTGGAAGCGGGTCTGGCGGCAGCGGGCCTTTCCGCACTCTTCACTGGCCCGATGCCAACACCGGCCGTGGCTTATCTGACGCGTACCTTCCGCGCAGAGGCCGGAATTGTGATATCTGCATCGCATAACCCGTTCTACGATAATGGCATTAAATTCTTCTCTATCGACGGCACCAAACTGCCGGATGCGGTAGAAGAGGCCATCGAAGCGGAAATGGAAAAGGAGATCAGCTGCGTTGATTCGGCAGAACTGGGTAAAGCCAGCCGTATCGTTGATGCCGCGGGTCGCTATATCGAGTTTTGCAAAGCCACGTTCCCGAACGAACTTAGCCTCAGTGAACTGAAGATTGTGGTGGATTGTGCAAACGGTGCGACTTATCACATCGCGCCGAACGTGCTGCGCGAACTGGGGGCGAACGTTATCGCTATCGGTTGTGAGCCAAACGGTGTAAACATCAATGCCGAAGTGGGGGCTACCGACGTTCGCGCGCTCCAGGCTCGTGTGCTGGCTGAAAAAGCGGATCTCGGTATTGCCTTCGACGGCGATGGCGATCGCGTGATTATGGTTGACCATGAAGGCAATAAAGTCGATGGCGATCAGATCATGTATATCATCGCGCGTGAAGGTCTTCGTCAGGGCCAGCTGCGTGGTGGCGCTGTGGGTACATTGATGAGCAACATGGGGCTTGAACTGGCGCTGAAACAGTTAGGAATTCCATTTGCGCGCGCGAAAGTGGGTGACCGCTACGTACTGGAAAAAATGCAGGAGAAAGGCTGGCGTATCGGTGCAGAGAATTCCGGTCATGTGATCCTGCTGGATAAAACTACTACCGGTGACGGCATCGTTGCTGGCTTGCAGGTGCTGGCGGCGATGGCACGTAACCATATGAGCCTGCACGACCTTTGCAGCGGCATGAAAATGTTCCCGCAGATTCTGGTTAACGTACGTTACACCGCAGGTAGCGGCGATCCACTTGAGCATGAGTCAGTTAAAGCCGTGACCGCAGAGGTTGAAGCTGCGCTGGGCAACCGTGGACGCGTGTTGCTGCGTAAATCCGGCACCGAACCGTTAATTCGCGTGATGGTGGAAGGCGAAGACGAAGCGCAGGTGACTGAATTTGCACACCGCATCGCCGATGCAGTAAAAGCCGTTTAA", + "dna_sequence_length": 1338, + "functions": [ + "phosphoglucosamine mutase" + ], + "id": "CDS_3121", + "location": [ + [ + "NC_000913", + 3324070, + "-", + 1338 + ] + ], + "md5": "471b7e1e6a206efb7be94e87bee953f8", + "parent_gene": "", + "protein_md5": "a48afbb2e862540610188d89fb0f7d0e", + "protein_translation": "MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010441" + ], + [ + "gene_synonym", + "ECK3166" + ], + [ + "gene_synonym", + "EcoGene:EG50011" + ], + [ + "gene_synonym", + "GI:90111553" + ], + [ + "gene_synonym", + "GeneID:947691" + ], + [ + "gene_synonym", + "JW3144" + ], + [ + "gene_synonym", + "NP_417644.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC13" + ], + [ + "gene_synonym", + "b3177" + ], + [ + "gene_synonym", + "dhpS" + ], + [ + "gene_synonym", + "folP" + ] + ], + "dna_sequence": "ATGAAACTCTTTGCCCAGGGTACTTCACTGGACCTTAGCCATCCTCACGTAATGGGGATCCTCAACGTCACGCCTGATTCCTTTTCGGATGGTGGCACGCATAACTCGCTGATAGATGCGGTGAAACATGCGAATCTGATGATCAACGCTGGCGCGACGATCATTGACGTTGGTGGCGAGTCCACGCGCCCAGGGGCGGCGGAAGTTAGCGTTGAAGAAGAGTTGCAACGTGTTATTCCTGTGGTTGAGGCAATTGCTCAACGCTTCGAAGTCTGGATCTCAGTCGATACATCCAAACCAGAAGTCATCCGTGAGTCAGCGAAAGTTGGCGCTCACATTATTAATGATATCCGCTCCCTTTCCGAACCTGGCGCTCTGGAGGCGGCTGCAGAAACCGGTTTACCGGTTTGTCTGATGCATATGCAGGGAAATCCAAAAACCATGCAGGAAGCTCCGAAGTATGACGATGTCTTTGCAGAAGTGAATCGCTACTTTATTGAGCAAATAGCACGTTGCGAGCAGGCGGGTATCGCAAAAGAGAAATTGTTGCTCGACCCCGGATTCGGTTTCGGTAAAAATCTCTCCCATAACTATTCATTACTGGCGCGCCTGGCTGAATTTCACCATTTCAACCTGCCGCTGTTGGTGGGTATGTCACGAAAATCGATGATTGGGCAGCTGCTGAACGTGGGGCCGTCCGAGCGCCTGAGCGGTAGTCTGGCCTGTGCGGTCATTGCCGCAATGCAAGGCGCGCACATCATTCGTGTTCATGACGTCAAAGAAACCGTAGAAGCGATGCGGGTGGTGGAAGCCACTCTGTCTGCAAAGGAAAACAAACGCTATGAGTAA", + "dna_sequence_length": 849, + "functions": [ + "7,8-dihydropteroate synthase" + ], + "id": "CDS_3122", + "location": [ + [ + "NC_000913", + 3324911, + "-", + 849 + ] + ], + "md5": "e9a40b6318df99c73ea9b8b6a09e43aa", + "parent_gene": "", + "protein_md5": "3e5a1611818dc3e68ad57f45d999d7a6", + "protein_translation": "MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010444" + ], + [ + "gene_synonym", + "ECK3167" + ], + [ + "gene_synonym", + "EcoGene:EG11506" + ], + [ + "gene_synonym", + "GI:16131068" + ], + [ + "gene_synonym", + "GeneID:947690" + ], + [ + "gene_synonym", + "JW3145" + ], + [ + "gene_synonym", + "NP_417645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAI3" + ], + [ + "gene_synonym", + "b3178" + ], + [ + "gene_synonym", + "ftsH" + ], + [ + "gene_synonym", + "hflB" + ], + [ + "gene_synonym", + "mrsC" + ], + [ + "gene_synonym", + "std" + ], + [ + "gene_synonym", + "tolZ" + ] + ], + "dna_sequence": "ATGGCGAAAAACCTAATACTCTGGCTGGTCATTGCCGTTGTGCTGATGTCAGTATTCCAGAGCTTTGGGCCCAGCGAGTCTAATGGCCGTAAGGTGGATTACTCTACCTTCCTACAAGAGGTCAATAACGACCAGGTTCGTGAAGCGCGTATCAACGGACGTGAAATCAACGTTACCAAGAAAGATAGTAACCGTTATACCACTTACATTCCGGTTCAGGATCCGAAATTACTGGATAACCTGTTGACCAAGAACGTCAAGGTTGTCGGTGAACCGCCTGAAGAACCAAGCCTGCTGGCTTCTATCTTCATCTCCTGGTTCCCGATGCTGTTGCTGATTGGTGTCTGGATCTTCTTCATGCGTCAAATGCAGGGCGGCGGTGGCAAAGGTGCCATGTCGTTTGGTAAGAGCAAAGCGCGCATGCTGACGGAAGATCAGATCAAAACGACCTTTGCTGACGTTGCGGGCTGCGACGAAGCAAAAGAAGAAGTTGCTGAACTGGTTGAGTATCTGCGCGAGCCGAGCCGCTTCCAGAAACTCGGCGGTAAGATCCCGAAAGGCGTCTTGATGGTCGGTCCTCCGGGTACCGGTAAAACGCTGCTGGCGAAAGCGATTGCAGGCGAAGCGAAAGTTCCGTTCTTTACTATCTCCGGTTCTGACTTCGTAGAAATGTTCGTCGGTGTGGGTGCATCCCGTGTTCGTGACATGTTCGAACAGGCGAAGAAAGCGGCACCGTGCATCATCTTTATCGATGAAATCGACGCCGTAGGCCGCCAGCGTGGCGCTGGTCTGGGCGGTGGTCACGATGAACGTGAACAGACTCTGAACCAGATGCTGGTTGAGATGGATGGCTTCGAAGGTAACGAAGGTATCATCGTTATCGCCGCGACTAACCGTCCGGACGTTCTCGACCCGGCCCTGCTGCGTCCTGGCCGTTTCGACCGTCAGGTTGTGGTCGGCTTGCCAGATGTTCGCGGTCGTGAGCAGATCCTGAAAGTTCACATGCGTCGCGTACCATTGGCACCCGATATCGACGCGGCAATCATTGCCCGTGGTACTCCTGGTTTCTCCGGTGCTGACCTGGCGAACCTGGTGAACGAAGCGGCACTGTTCGCTGCTCGTGGCAACAAACGCGTTGTGTCGATGGTTGAGTTCGAGAAAGCGAAAGACAAAATCATGATGGGTGCGGAACGTCGCTCCATGGTGATGACGGAAGCGCAGAAAGAATCGACGGCTTACCACGAAGCGGGTCATGCGATTATCGGTCGCCTGGTGCCGGAACACGATCCGGTGCACAAAGTGACGATTATCCCACGCGGTCGTGCGCTGGGTGTGACTTTCTTCTTGCCTGAGGGCGACGCAATCAGCGCCAGCCGTCAGAAACTGGAAAGCCAGATTTCTACGCTGTACGGTGGTCGTCTGGCAGAAGAGATCATCTACGGGCCGGAACATGTATCTACCGGTGCGTCCAACGATATTAAAGTTGCGACCAACCTGGCACGTAACATGGTGACTCAGTGGGGCTTCTCTGAGAAATTGGGTCCACTGCTGTACGCGGAAGAAGAAGGTGAAGTGTTCCTCGGCCGTAGCGTAGCGAAAGCGAAACATATGTCCGATGAAACTGCACGTATCATCGACCAGGAAGTGAAAGCACTGATTGAGCGTAACTATAATCGTGCGCGTCAGCTTCTGACCGACAATATGGATATTCTGCATGCGATGAAAGATGCTCTCATGAAATATGAGACTATCGACGCACCGCAGATTGATGACCTGATGGCACGTCGCGATGTACGTCCGCCAGCGGGCTGGGAAGAACCAGGCGCTTCTAACAATTCTGGCGACAATGGTAGTCCAAAGGCTCCTCGTCCGGTTGATGAACCGCGTACGCCGAACCCGGGTAACACCATGTCAGAGCAGTTAGGCGACAAGTAA", + "dna_sequence_length": 1935, + "functions": [ + "protease, ATP-dependent zinc-metallo" + ], + "id": "CDS_3123", + "location": [ + [ + "NC_000913", + 3326935, + "-", + 1935 + ] + ], + "md5": "85c865503dc29c19b9b2727c18c29c76", + "parent_gene": "", + "protein_md5": "be9a89b705d157b2d7358a7f019fb0f8", + "protein_translation": "MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK", + "protein_translation_length": 644, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010447" + ], + [ + "gene_synonym", + "ECK3168" + ], + [ + "gene_synonym", + "EcoGene:EG11507" + ], + [ + "gene_synonym", + "GI:16131069" + ], + [ + "gene_synonym", + "GeneID:947689" + ], + [ + "gene_synonym", + "JW3146" + ], + [ + "gene_synonym", + "NP_417646.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0R7" + ], + [ + "gene_synonym", + "b3179" + ], + [ + "gene_synonym", + "ftsJ" + ], + [ + "gene_synonym", + "mrsF" + ], + [ + "gene_synonym", + "rlmE" + ], + [ + "gene_synonym", + "rrmJ" + ] + ], + "dna_sequence": "ATGACAGGTAAGAAGCGTTCTGCCAGCTCCAGCCGCTGGCTTCAGGAACACTTTAGCGATAAATATGTTCAACAGGCACAGAAAAAGGGGTTACGTTCCCGTGCCTGGTTTAAACTTGATGAAATACAGCAAAGTGACAAACTCTTTAAACCGGGAATGACGGTTGTCGACCTTGGTGCTGCTCCGGGTGGTTGGTCACAATATGTGGTCACCCAAATTGGCGGCAAAGGCCGCATCATCGCTTGCGATCTTTTACCTATGGATCCTATCGTTGGTGTGGACTTTCTTCAGGGCGATTTTCGTGATGAACTGGTGATGAAAGCACTGCTGGAGCGCGTTGGCGACAGCAAAGTCCAGGTTGTCATGTCCGATATGGCACCAAACATGAGCGGAACACCGGCGGTGGATATCCCCCGTGCCATGTATCTGGTGGAACTGGCGCTAGAAATGTGTCGTGATGTATTAGCGCCAGGTGGCAGTTTTGTAGTGAAGGTGTTCCAGGGCGAAGGTTTCGATGAGTATCTAAGGGAAATTCGCTCCCTGTTTACGAAGGTCAAAGTTCGTAAGCCGGACTCTTCTCGTGCACGTTCGCGGGAAGTGTATATTGTAGCGACCGGGCGTAAACCCTAA", + "dna_sequence_length": 630, + "functions": [ + "23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent" + ], + "id": "CDS_3124", + "location": [ + [ + "NC_000913", + 3327664, + "-", + 630 + ] + ], + "md5": "991f53c8ee287dd9061c88c911205b6c", + "parent_gene": "", + "protein_md5": "a04f362abdb231dcff8b802527688b2f", + "protein_translation": "MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010452" + ], + [ + "gene_synonym", + "ECK3169" + ], + [ + "gene_synonym", + "EcoGene:EG12794" + ], + [ + "gene_synonym", + "GI:16131070" + ], + [ + "gene_synonym", + "GeneID:947688" + ], + [ + "gene_synonym", + "JW3147" + ], + [ + "gene_synonym", + "NP_417647.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGK4" + ], + [ + "gene_synonym", + "b3180" + ], + [ + "gene_synonym", + "yhbY" + ] + ], + "dna_sequence": "ATGAATCTGAGTACTAAACAAAAACAGCACCTGAAAGGTCTGGCACATCCGCTCAAGCCAGTTGTTCTGCTTGGCAGTAATGGTTTGACCGAAGGGGTGCTGGCCGAGATTGAACAAGCGTTAGAGCACCATGAACTCATCAAGGTGAAAATCGCCACCGAAGATCGCGAAACTAAAACCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAA", + "dna_sequence_length": 294, + "functions": [ + "RNA binding protein associated with pre-50S ribosomal subunits" + ], + "id": "CDS_3125", + "location": [ + [ + "NC_000913", + 3327790, + "+", + 294 + ] + ], + "md5": "520424889322bed688a9546a494bc9fe", + "parent_gene": "", + "protein_md5": "6430a14f5b78b1e75288bbc6f448e0c5", + "protein_translation": "MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010454" + ], + [ + "gene_synonym", + "ECK3170" + ], + [ + "gene_synonym", + "EcoGene:EG10415" + ], + [ + "gene_synonym", + "GI:90111554" + ], + [ + "gene_synonym", + "GeneID:947696" + ], + [ + "gene_synonym", + "JW3148" + ], + [ + "gene_synonym", + "NP_417648.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W5" + ], + [ + "gene_synonym", + "b3181" + ], + [ + "gene_synonym", + "greA" + ] + ], + "dna_sequence": "ATGCAAGCTATTCCGATGACCTTACGCGGCGCTGAAAAATTACGCGAAGAGCTGGATTTTCTGAAATCTGTGCGCCGTCCTGAAATCATTGCTGCTATCGCGGAAGCGCGTGAGCATGGCGACCTGAAAGAAAACGCCGAATACCACGCAGCTCGTGAACAGCAGGGTTTCTGCGAAGGCCGTATTAAAGACATCGAAGCCAAGCTGTCGAACGCGCAGGTGATTGATGTCACCAAAATGCCCAACAATGGGCGCGTTATTTTTGGTGCTACCGTAACGGTGCTGAATCTGGATTCTGACGAAGAACAGACTTATCGCATCGTTGGCGATGACGAAGCTGACTTTAAACAAAACCTGATTTCTGTAAACTCGCCTATTGCTCGTGGCCTGATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAA", + "dna_sequence_length": 477, + "functions": [ + "transcript cleavage factor" + ], + "id": "CDS_3126", + "location": [ + [ + "NC_000913", + 3328715, + "-", + 477 + ] + ], + "md5": "7f9ce8d7b0931eb05f817cfc7b3903ee", + "parent_gene": "", + "protein_md5": "f95204fe2fc7c5121ae469e673ef6f03", + "protein_translation": "MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010458" + ], + [ + "gene_synonym", + "ECK3171" + ], + [ + "gene_synonym", + "EcoGene:EG10202" + ], + [ + "gene_synonym", + "GI:16131072" + ], + [ + "gene_synonym", + "GeneID:947693" + ], + [ + "gene_synonym", + "JW3149" + ], + [ + "gene_synonym", + "NP_417649.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24228" + ], + [ + "gene_synonym", + "b3182" + ], + [ + "gene_synonym", + "dacB" + ] + ], + "dna_sequence": "ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCAAATGTTGATGAGTACATTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCTGCCAGTACCCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTACAGTGCCCCAAAGCCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACGGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGAGCCAGCTATGCCGGTGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCCCAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGAAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTGCAATATCTTTCTGGCTATGCAGTAGAACCTGCGGATCAGCGTAATCGCCGTATTCCGTTAGTGCGTTTTGAAAGCCGTTTGTATAAAGATATTTATCAGAACAATTAG", + "dna_sequence_length": 1434, + "functions": [ + "D-alanyl-D-alanine carboxypeptidase" + ], + "id": "CDS_3127", + "location": [ + [ + "NC_000913", + 3328963, + "+", + 1434 + ] + ], + "md5": "988774a732aaffb8616b9d26620cf8a7", + "parent_gene": "", + "protein_md5": "859c13d4bf76a7de02832a5f905d1f92", + "protein_translation": "MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010462" + ], + [ + "gene_synonym", + "ECK3172" + ], + [ + "gene_synonym", + "EcoGene:EG12795" + ], + [ + "gene_synonym", + "GI:16131073" + ], + [ + "gene_synonym", + "GeneID:947694" + ], + [ + "gene_synonym", + "JW3150" + ], + [ + "gene_synonym", + "NP_417650.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42641" + ], + [ + "gene_synonym", + "b3183" + ], + [ + "gene_synonym", + "cgtA" + ], + [ + "gene_synonym", + "obg" + ], + [ + "gene_synonym", + "obgE" + ], + [ + "gene_synonym", + "yhbZ" + ] + ], + "dna_sequence": "ATGAAGTTTGTTGATGAAGCATCGATTCTGGTCGTTGCAGGTGATGGCGGTAATGGTTGCGTGAGCTTCCGCCGCGAAAAGTATATTCCGAAAGGCGGCCCGGATGGCGGCGACGGCGGTGATGGTGGTGACGTATGGATGGAAGCCGACGAGAACCTGAACACGCTTATCGATTATCGTTTTGAAAAATCTTTCCGTGCAGAGCGCGGTCAGAATGGCGCAAGCCGCGACTGTACCGGTAAGCGCGGTAAAGACGTGACGATTAAAGTGCCGGTAGGTACGCGTGTAATCGACCAGGGTACTGGTGAAACCATGGGCGATATGACCAAACACGGTCAGCGTCTGCTGGTTGCTAAGGGCGGCTGGCACGGTCTGGGCAATACCCGTTTCAAATCGTCCGTTAACCGTACACCGCGGCAGAAAACCAACGGCACGCCGGGCGATAAGCGCGAGCTGCTGCTGGAGCTGATGCTGCTGGCTGACGTCGGTATGTTGGGGATGCCAAACGCGGGTAAATCGACCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAATGGACAACGAAAAGAGCTTCGTTGTTGCCGATATTCCAGGACTGATTGAAGGCGCTGCGGAAGGCGCAGGTCTGGGCATTCGCTTCCTGAAGCACCTGGAACGTTGCCGCGTCCTGTTGCACCTCATCGATATCGATCCGATTGACGGCACCGATCCGGTTGAAAACGCGCGTATTATTATCAGCGAGCTGGAAAAATACAGCCAGGATCTGGCGACGAAACCGCGTTGGTTAGTGTTCAACAAGATCGATCTGCTGGATAAGGTAGAAGCCGAAGAGAAAGCGAAAGCGATCGCTGAGGCGCTGGGCTGGGAAGATAAATATTATCTGATCTCTGCGGCGAGTGGACTGGGCGTGAAAGATCTCTGCTGGGATGTGATGACCTTTATCATTGAAAACCCGGTCGTGCAGGCTGAAGAAGCGAAACAGCCAGAGAAAGTCGAATTCATGTGGGATGATTATCATCGCCAGCAGCTTGAAGAGATTGCTGAAGAGGATGATGAAGACTGGGATGACGACTGGGACGAAGACGACGAAGAAGGCGTTGAGTTCATTTACAAGCGTTAA", + "dna_sequence_length": 1173, + "functions": [ + "GTPase involved in cell partioning and DNA repair" + ], + "id": "CDS_3128", + "location": [ + [ + "NC_000913", + 3331754, + "-", + 1173 + ] + ], + "md5": "ab2ca42b535632f6d07da70f8eabf85b", + "parent_gene": "", + "protein_md5": "eed02db95ce28bb7c37465a5fac24899", + "protein_translation": "MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR", + "protein_translation_length": 390, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010464" + ], + [ + "gene_synonym", + "ECK3173" + ], + [ + "gene_synonym", + "EcoGene:EG11499" + ], + [ + "gene_synonym", + "GI:16131074" + ], + [ + "gene_synonym", + "GeneID:947699" + ], + [ + "gene_synonym", + "JW3151" + ], + [ + "gene_synonym", + "NP_417651.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA73" + ], + [ + "gene_synonym", + "b3184" + ], + [ + "gene_synonym", + "yhbE" + ] + ], + "dna_sequence": "ATGAAGCAGCAGGCAGGCATTGGCATTCTTTTGGCGCTCACCACAGCAATTTGCTGGGGGGCGTTGCCAATCGCAATGAAGCAGGTGCTGGAGGTGATGGAACCTCCGACAATCGTGTTTTACCGTTTCTTGATGGCGAGTATTGGCCTGGGTGCCATTCTTGCGGTGAAGAAGAGGTTGCCGCCATTACGCGTGTTTCGTAAGCCACGCTGGTTGATTTTGTTGGCAGTGGCGACCGCCGGGCTGTTTGGGAACTTCATCCTGTTCAGCTCATCCTTGCAATACCTGAGTCCGACCGCTTCGCAGGTGATTGGGCAACTCTCGCCAGTTGGCATGATGGTTGCCAGCGTATTTATCCTCAAAGAGAAAATGCGCAGCACTCAGGTTGTAGGGGCATTGATGCTCCTGAGCGGCCTGGTGATGTTTTTTAACACCAGTCTGGTCGAGATATTTACAAAGCTCACCGATTACACCTGGGGAGTTATCTTTGGGGTCGGTGCGGCGACGGTTTGGGTGAGTTATGGCGTGGCGCAAAAGGTTTTATTGCGTCGGCTGGCCTCACCGCAGATCCTGTTTTTACTGTACACTTTATGTACAATTGCGCTCTTCCCTCTGGCAAAGCCTGGAGTGATAGCGCAGCTTAGCCACTGGCAGCTCGCATGTTTAATTTTTTGCGGACTGAATACCTTGGTAGGATATGGCGCCCTGGCGGAAGCGATGGCTCGCTGGCAGGCAGCGCAGGTGAGCGCGATCATCACGCTCACCCCACTGTTTACGCTGTTTTTTTCAGATCTTTTATCACTGGCCTGGCCCGATTTCTTCGCCAGACCGATGTTAAACCTTTTAGGTTATCTCGGTGCGTTTGTCGTGGTTGCGGGCGCGATGTATTCCGCCATTGGTCATCGTATTTGGGGCGGATTACGTAAGCATACAACGGTGGTATCGCAACCCCGCGCAGGCGAATGA", + "dna_sequence_length": 966, + "functions": [ + "EamA family inner membrane putative transporter" + ], + "id": "CDS_3129", + "location": [ + [ + "NC_000913", + 3332735, + "-", + 966 + ] + ], + "md5": "41cdce2202ea5942a94c800e14eb484c", + "parent_gene": "", + "protein_md5": "902bb28bbb38b20e4282f307603bca62", + "protein_translation": "MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010468" + ], + [ + "gene_synonym", + "ECK3174" + ], + [ + "gene_synonym", + "EcoGene:EG50002" + ], + [ + "gene_synonym", + "GI:16131075" + ], + [ + "gene_synonym", + "GeneID:945190" + ], + [ + "gene_synonym", + "JW3152" + ], + [ + "gene_synonym", + "NP_417652.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7L8" + ], + [ + "gene_synonym", + "b3185" + ], + [ + "gene_synonym", + "rpmA" + ], + [ + "gene_synonym", + "rpz" + ] + ], + "dna_sequence": "ATGGCACATAAAAAGGCTGGCGGCTCCACACGTAACGGTCGCGATTCAGAAGCTAAACGCCTGGGCGTTAAGCGTTTCGGTGGCGAATCCGTTCTGGCGGGTAGCATCATCGTTCGTCAACGTGGTACCAAATTCCACGCTGGCGCTAACGTAGGTTGCGGTCGTGACCACACTCTGTTTGCTAAAGCAGACGGTAAAGTGAAATTCGAAGTTAAAGGCCCGAAAAACCGTAAATTTATCAGCATCGAAGCTGAATAA", + "dna_sequence_length": 258, + "functions": [ + "50S ribosomal subunit protein L27" + ], + "id": "CDS_3130", + "location": [ + [ + "NC_000913", + 3333119, + "-", + 258 + ] + ], + "md5": "d8d1944c957096ee3ecc4d3a9d9f998e", + "parent_gene": "", + "protein_md5": "f2a48cf62f93cb72e86a7a3f4e4c92ad", + "protein_translation": "MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010470" + ], + [ + "gene_synonym", + "ECK3175" + ], + [ + "gene_synonym", + "EcoGene:EG50001" + ], + [ + "gene_synonym", + "GI:16131076" + ], + [ + "gene_synonym", + "GeneID:949057" + ], + [ + "gene_synonym", + "JW3153" + ], + [ + "gene_synonym", + "NP_417653.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG48" + ], + [ + "gene_synonym", + "b3186" + ], + [ + "gene_synonym", + "rplU" + ] + ], + "dna_sequence": "ATGTACGCGGTTTTCCAAAGTGGTGGTAAACAACACCGAGTAAGCGAAGGTCAGACCGTTCGCCTGGAAAAGCTGGACATCGCAACTGGCGAAACTGTTGAGTTCGCTGAAGTGCTGATGATCGCAAACGGTGAAGAAGTCAAAATCGGCGTTCCTTTCGTTGATGGCGGCGTAATCAAAGCTGAAGTTGTTGCTCACGGTCGTGGCGAGAAAGTTAAAATCGTTAAGTTTCGTCGTCGTAAACACTATCGTAAGCAGCAGGGCCATCGTCAGTGGTTCACTGATGTGAAAATTACTGGCATCAGCGCCTAA", + "dna_sequence_length": 312, + "functions": [ + "50S ribosomal subunit protein L21" + ], + "id": "CDS_3131", + "location": [ + [ + "NC_000913", + 3333451, + "-", + 312 + ] + ], + "md5": "c17ead76e05db0632d19f0dbac2ca6b5", + "parent_gene": "", + "protein_md5": "3a22854b60f2d397294992484f1a8b31", + "protein_translation": "MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010474" + ], + [ + "gene_synonym", + "ECK3176" + ], + [ + "gene_synonym", + "EcoGene:EG10017" + ], + [ + "gene_synonym", + "GI:16131077" + ], + [ + "gene_synonym", + "GeneID:947364" + ], + [ + "gene_synonym", + "JW3154" + ], + [ + "gene_synonym", + "NP_417654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD57" + ], + [ + "gene_synonym", + "b3187" + ], + [ + "gene_synonym", + "cel" + ], + [ + "gene_synonym", + "ispB" + ], + [ + "gene_synonym", + "yhbD" + ] + ], + "dna_sequence": "ATGAATTTAGAAAAAATCAATGAGTTAACCGCGCAAGATATGGCGGGTGTTAATGCGGCAATCCTTGAGCAGCTTAATTCCGACGTCCAACTGATCAATCAGTTAGGCTATTACATCGTCAGCGGCGGCGGTAAACGTATTCGTCCGATGATTGCTGTACTGGCTGCACGAGCTGTTGGCTATGAGGGAAATGCGCATGTCACCATTGCTGCCCTGATCGAGTTTATCCACACGGCGACTCTGCTACACGACGACGTTGTGGATGAATCAGATATGCGCAGGGGTAAAGCTACCGCCAACGCCGCATTTGGCAATGCCGCCAGCGTGCTGGTAGGCGATTTTATTTATACCCGCGCTTTCCAGATGATGACCAGCCTCGGTTCGCTCAAAGTGCTGGAAGTCATGTCAGAAGCCGTAAACGTCATCGCAGAAGGTGAAGTTCTGCAACTGATGAACGTTAACGATCCGGACATCACTGAAGAAAACTACATGCGCGTTATCTATAGCAAAACCGCGCGTCTGTTTGAGGCTGCCGCGCAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCAGAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAA", + "dna_sequence_length": 972, + "functions": [ + "octaprenyl diphosphate synthase" + ], + "id": "CDS_3132", + "location": [ + [ + "NC_000913", + 3333710, + "+", + 972 + ] + ], + "md5": "4b4e3a40e37a3b6ada2563ab7d71f493", + "parent_gene": "", + "protein_md5": "336b4f05a160e5cc79e6d8ece23f9828", + "protein_translation": "MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR", + "protein_translation_length": 323, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010477" + ], + [ + "gene_synonym", + "ECK3177" + ], + [ + "gene_synonym", + "EcoGene:EG10656" + ], + [ + "gene_synonym", + "GI:16131078" + ], + [ + "gene_synonym", + "GeneID:947960" + ], + [ + "gene_synonym", + "JW3155" + ], + [ + "gene_synonym", + "NP_417655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACH1" + ], + [ + "gene_synonym", + "b3188" + ], + [ + "gene_synonym", + "nlp" + ], + [ + "gene_synonym", + "sfs7" + ], + [ + "gene_synonym", + "sfsB" + ] + ], + "dna_sequence": "ATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGCCCTGGGAACTGACCCCTGGGTTATCTGGCCATCACGCTACCATGATCCGCAGACCCATGAGTTTATCGACAGAACGCAGTTGATGCGTAGCTACACTAAACCGAAAAAATGA", + "dna_sequence_length": 279, + "functions": [ + "malPQ operon transcriptional activator" + ], + "id": "CDS_3133", + "location": [ + [ + "NC_000913", + 3334909, + "+", + 279 + ] + ], + "md5": "ea79174334c1d1ae24c1689fd529e9ab", + "parent_gene": "", + "protein_md5": "8e9fca70277051eb4b503c63b7d1e731", + "protein_translation": "MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010479" + ], + [ + "gene_synonym", + "ECK3178" + ], + [ + "gene_synonym", + "EcoGene:EG11358" + ], + [ + "gene_synonym", + "GI:16131079" + ], + [ + "gene_synonym", + "GeneID:947703" + ], + [ + "gene_synonym", + "JW3156" + ], + [ + "gene_synonym", + "NP_417656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A749" + ], + [ + "gene_synonym", + "b3189" + ], + [ + "gene_synonym", + "mrbA" + ], + [ + "gene_synonym", + "murA" + ], + [ + "gene_synonym", + "murZ" + ] + ], + "dna_sequence": "ATGGATAAATTTCGTGTTCAGGGGCCAACGAAGCTCCAGGGCGAAGTCACAATTTCCGGCGCTAAAAATGCTGCTCTGCCTATCCTTTTTGCCGCACTACTGGCGGAAGAACCGGTAGAGATCCAGAACGTCCCGAAACTGAAAGACGTCGATACATCAATGAAGCTGCTAAGCCAGCTGGGTGCGAAAGTAGAACGTAATGGTTCTGTGCATATTGATGCCCGCGACGTTAATGTATTCTGCGCACCTTACGATCTGGTTAAAACCATGCGTGCTTCTATCTGGGCGCTGGGGCCGCTGGTAGCGCGCTTTGGTCAGGGGCAAGTTTCACTACCTGGCGGTTGTACGATCGGTGCGCGTCCGGTTGATCTACACATTTCTGGCCTCGAACAATTAGGCGCGACCATCAAACTGGAAGAAGGTTACGTTAAAGCTTCCGTCGATGGTCGTTTGAAAGGTGCACATATCGTGATGGATAAAGTCAGCGTTGGCGCAACGGTGACCATCATGTGTGCTGCAACCCTGGCGGAAGGCACCACGATTATTGAAAACGCAGCGCGTGAACCGGAAATCGTCGATACCGCGAACTTCCTGATTACGCTGGGTGCGAAAATTAGCGGTCAGGGCACCGATCGTATCGTCATCGAAGGTGTGGAACGTTTAGGCGGCGGTGTCTATCGCGTTCTGCCGGATCGTATCGAAACCGGTACTTTCCTGGTGGCGGCGGCGATTTCTCGCGGCAAAATTATCTGCCGTAACGCGCAGCCAGATACTCTCGACGCCGTGCTGGCGAAACTGCGTGACGCTGGAGCGGACATCGAAGTCGGCGAAGACTGGATTAGCCTGGATATGCATGGCAAACGTCCGAAGGCTGTTAACGTACGTACCGCGCCGCATCCGGCATTCCCGACCGATATGCAGGCCCAGTTCACGCTGTTGAACCTGGTGGCAGAAGGGACCGGGTTTATCACCGAAACGGTCTTTGAAAACCGCTTTATGCATGTGCCAGAGCTGAGCCGTATGGGCGCGCACGCCGAAATCGAAAGCAATACCGTTATTTGTCACGGTGTTGAAAAACTTTCTGGCGCACAGGTTATGGCAACCGATCTGCGTGCATCAGCAAGCCTGGTGCTGGCTGGCTGTATTGCGGAAGGGACGACGGTGGTTGATCGTATTTATCACATCGATCGTGGCTACGAACGCATTGAAGACAAACTGCGCGCTTTAGGTGCAAATATTGAGCGTGTGAAAGGCGAATAA", + "dna_sequence_length": 1260, + "functions": [ + "UDP-N-acetylglucosamine 1-carboxyvinyltransferase" + ], + "id": "CDS_3134", + "location": [ + [ + "NC_000913", + 3336494, + "-", + 1260 + ] + ], + "md5": "57172033ae69b45f2caee7516ebe96b9", + "parent_gene": "", + "protein_md5": "da252a2c9269b079bc15906d45923c9b", + "protein_translation": "MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010481" + ], + [ + "gene_synonym", + "ECK3179" + ], + [ + "gene_synonym", + "EcoGene:EG12796" + ], + [ + "gene_synonym", + "GI:90111555" + ], + [ + "gene_synonym", + "GeneID:947958" + ], + [ + "gene_synonym", + "JW3157" + ], + [ + "gene_synonym", + "NP_417657.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9W6" + ], + [ + "gene_synonym", + "b3190" + ], + [ + "gene_synonym", + "ibaG" + ], + [ + "gene_synonym", + "yrbA" + ] + ], + "dna_sequence": "ATGGAAAATAATGAAATTCAGAGCGTGTTGATGAACGCTCTCTCCCTCCAGGAAGTCCACGTTTCCGGCGATGGCAGCCACTTTCAGGTTATTGCCGTGGGTGAGTTGTTTGACGGCATGAGTCGGGTTAAAAAACAGCAGACGGTCTATGGTCCGCTGATGGAATATATTGCGGATAACCGCATTCATGCTGTGTCGATCAAAGCGTATACCCCTGCGGAGTGGGCGCGCGATCGCAAACTGAACGGCTTTTGA", + "dna_sequence_length": 255, + "functions": [ + "acid stress protein", + "putative BolA family transcriptional regulator" + ], + "id": "CDS_3135", + "location": [ + [ + "NC_000913", + 3336803, + "-", + 255 + ] + ], + "md5": "c6c11f0b991e30fd59e2a7f8aa9ccd42", + "parent_gene": "", + "protein_md5": "17762f76e0f81ac376f47293595200a3", + "protein_translation": "MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010487" + ], + [ + "gene_synonym", + "ECK3180" + ], + [ + "gene_synonym", + "EcoGene:EG12797" + ], + [ + "gene_synonym", + "GI:90111556" + ], + [ + "gene_synonym", + "GeneID:947954" + ], + [ + "gene_synonym", + "JW5535" + ], + [ + "gene_synonym", + "NP_417658.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64602" + ], + [ + "gene_synonym", + "b3191" + ], + [ + "gene_synonym", + "mlaB" + ], + [ + "gene_synonym", + "yrbB" + ] + ], + "dna_sequence": "ATGAGCGAGTCACTGAGCTGGATGCAGACGGGTGACACGCTGGCGTTATCCGGAGAGCTGGATCAGGACGTTTTGCTACCGCTTTGGGAAATGCGTGAGGAAGCGGTGAAGGGGATTACCTGCATCGATCTTAGCCGTGTCTCCCGCGTGGATACGGGGGGACTGGCACTGCTGCTCCATCTTATCGATCTGGCGAAAAAGCAGGGCAACAATGTGACGCTTCAGGGGGTAAACGACAAAGTGTATACCCTGGCGAAATTGTATAATTTGCCTGCTGATGTTCTGCCTCGTTAA", + "dna_sequence_length": 294, + "functions": [ + "ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component" + ], + "id": "CDS_3136", + "location": [ + [ + "NC_000913", + 3337256, + "-", + 294 + ] + ], + "md5": "6986a1a9b40fe8c3fdfc64d9e2875fc1", + "parent_gene": "", + "protein_md5": "1d548dd9d8568695e9de75257f23917a", + "protein_translation": "MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDLSRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010489" + ], + [ + "gene_synonym", + "ECK3181" + ], + [ + "gene_synonym", + "EcoGene:EG12798" + ], + [ + "gene_synonym", + "GI:16131082" + ], + [ + "gene_synonym", + "GeneID:947710" + ], + [ + "gene_synonym", + "JW3159" + ], + [ + "gene_synonym", + "NP_417659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV7" + ], + [ + "gene_synonym", + "b3192" + ], + [ + "gene_synonym", + "mlaC" + ], + [ + "gene_synonym", + "yrbC" + ] + ], + "dna_sequence": "ATGTTTAAACGTTTAATGATGGTCGCTTTGCTGGTGATTGCACCTCTGAGTGCGGCAACCGCGGCAGACCAGACCAATCCGTATAAGCTGATGGACGAGGCGGCGCAGAAAACGTTCGATCGCCTGAAGAATGAGCAACCGCAAATTCGGGCCAACCCGGATTATCTGCGTACCATTGTTGATCAGGAACTGCTGCCATACGTACAGGTGAAATACGCCGGTGCGCTGGTGCTGGGCCAGTATTACAAGAGTGCGACCCCTGCTCAACGTGAAGCCTACTTTGCCGCTTTCCGTGAGTACCTGAAGCAGGCTTACGGTCAGGCGCTGGCGATGTATCACGGTCAAACCTATCAGATTGCGCCAGAACAGCCGCTGGGCGATAAAACCATTGTGCCTATTCGCGTTACCATTATTGACCCGAATGGCCGTCCGCCGGTGCGTCTGGACTTCCAGTGGCGTAAAAACTCCCAGACGGGCAATTGGCAGGCTTACGACATGATTGCTGAAGGCGTCAGTATGATCACCACCAAACAAAACGAGTGGGGAACGCTGCTGCGTACCAAAGGTATCGACGGCCTGACTGCGCAACTGAAATCGATTTCTCAACAGAAAATCACTCTGGAAGAGAAAAAATAA", + "dna_sequence_length": 636, + "functions": [ + "ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein" + ], + "id": "CDS_3137", + "location": [ + [ + "NC_000913", + 3337891, + "-", + 636 + ] + ], + "md5": "88cd247eed2b5c86bf109327656f0773", + "parent_gene": "", + "protein_md5": "f9202d3d2ddea3d73ae6e3b73b4adb52", + "protein_translation": "MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010493" + ], + [ + "gene_synonym", + "ECK3182" + ], + [ + "gene_synonym", + "EcoGene:EG12799" + ], + [ + "gene_synonym", + "GI:16131083" + ], + [ + "gene_synonym", + "GeneID:947712" + ], + [ + "gene_synonym", + "JW3160" + ], + [ + "gene_synonym", + "NP_417660.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64604" + ], + [ + "gene_synonym", + "b3193" + ], + [ + "gene_synonym", + "mlaD" + ], + [ + "gene_synonym", + "vpsC" + ], + [ + "gene_synonym", + "yrbD" + ] + ], + "dna_sequence": "ATGCAAACGAAAAAAAATGAAATTTGGGTGGGTATCTTTTTATTAGCAGCACTGCTGGCGGCGCTGTTTGTTTGCCTGAAGGCGGCGAACGTGACGTCCATACGTACTGAACCGACCTACACGCTTTATGCGACGTTCGATAACATTGGCGGCCTGAAAGCGCGCTCTCCGGTCAGTATTGGTGGCGTTGTTGTGGGTCGGGTGGCGGATATTACGCTGGACCCGAAAACCTATCTGCCGCGCGTAACGCTGGAAATTGAACAACGTTATAACCACATTCCAGATACCAGTTCGCTGAGCATTCGTACTTCCGGCCTGCTGGGGGAACAATATCTGGCATTAAACGTCGGTTTTGAAGACCCGGAACTGGGGACTGCTATCCTGAAGGATGGCGATACAATTCAGGACACTAAGTCTGCGATGGTGCTGGAAGATCTCATTGGTCAGTTCCTTTACGGTAGTAAAGGCGATGACAATAAGAATAGTGGCGATGCGCCAGCTGCTGCGCCAGGTAATAATGAAACCACTGAACCTGTGGGTACAACGAAATAA", + "dna_sequence_length": 552, + "functions": [ + "OM lipid asymmetry maintenance protein", + "membrane-anchored ABC family periplasmic binding protein" + ], + "id": "CDS_3138", + "location": [ + [ + "NC_000913", + 3338461, + "-", + 552 + ] + ], + "md5": "23a1030ff899cdfc363aec60bec416f2", + "parent_gene": "", + "protein_md5": "e49f79e31d9df52e18a789af3b13a1f3", + "protein_translation": "MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010495" + ], + [ + "gene_synonym", + "ECK3183" + ], + [ + "gene_synonym", + "EcoGene:EG12800" + ], + [ + "gene_synonym", + "GI:16131084" + ], + [ + "gene_synonym", + "GeneID:947732" + ], + [ + "gene_synonym", + "JW3161" + ], + [ + "gene_synonym", + "NP_417661.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64606" + ], + [ + "gene_synonym", + "b3194" + ], + [ + "gene_synonym", + "mlaE" + ], + [ + "gene_synonym", + "vpsB" + ], + [ + "gene_synonym", + "yrbE" + ] + ], + "dna_sequence": "ATGCTGTTAAATGCGCTGGCGTCGCTCGGACATAAAGGGATTAAAACCCTGAGAACGTTCGGGCGGGCCGGGTTAATGTTATTCAATGCGCTGGTCGGCAAACCGGAATTTCGCAAACATGCGCCGCTGCTGGTGCGCCAGCTCTATAATGTCGGCGTCCTGTCGATGCTGATTATTGTGGTTTCTGGCGTGTTCATCGGAATGGTGTTGGGGCTGCAAGGTTATCTGGTTCTGACCACTTATAGTGCGGAAACCAGTCTGGGTATGCTGGTGGCGTTATCGCTACTGCGTGAACTGGGGCCGGTGGTTGCCGCGTTGTTGTTTGCCGGGCGTGCTGGTTCGGCGCTAACCGCAGAAATCGGCCTGATGCGCGCTACAGAGCAACTCTCCAGTATGGAGATGATGGCGGTGGATCCGCTGCGTCGGGTTATTTCTCCCCGTTTCTGGGCTGGGGTTATTTCATTACCACTGTTGACGGTTATTTTCGTCGCCGTGGGGATCTGGGGCGGATCTCTGGTCGGCGTCAGTTGGAAAGGCATTGATAGCGGGTTCTTCTGGTCGGCAATGCAAAATGCCGTCGACTGGCGTATGGATCTGGTCAACTGTCTGATTAAGAGCGTGGTGTTCGCCATCACGGTGACGTGGATTTCGTTGTTTAACGGCTACGACGCCATCCCGACGTCTGCCGGGATTAGCCGGGCAACCACTCGCACCGTTGTCCACTCGTCTCTGGCTGTTCTGGGGCTGGATTTTGTGCTGACCGCATTGATGTTTGGGAATTGA", + "dna_sequence_length": 783, + "functions": [ + "ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein" + ], + "id": "CDS_3139", + "location": [ + [ + "NC_000913", + 3339248, + "-", + 783 + ] + ], + "md5": "ca4ee5cdc41d8858e624b49c28d8e3a3", + "parent_gene": "", + "protein_md5": "8f27ec0d780bfc7bb9f01b24673b9a1a", + "protein_translation": "MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010498" + ], + [ + "gene_synonym", + "ECK3184" + ], + [ + "gene_synonym", + "EcoGene:EG12801" + ], + [ + "gene_synonym", + "GI:16131085" + ], + [ + "gene_synonym", + "GeneID:947729" + ], + [ + "gene_synonym", + "JW3162" + ], + [ + "gene_synonym", + "NP_417662.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63386" + ], + [ + "gene_synonym", + "b3195" + ], + [ + "gene_synonym", + "mlaF" + ], + [ + "gene_synonym", + "vpsA" + ], + [ + "gene_synonym", + "yrbF" + ] + ], + "dna_sequence": "ATGGAGCAGTCTGTGGCGAATTTAGTCGATATGCGCGATGTCAGTTTTACGCGTGGCAATCGCTGCATCTTCGATAATATTTCCCTGACCGTGCCGCGAGGGAAGATCACGGCGATCATGGGGCCATCGGGCATCGGTAAAACGACGCTACTCCGTCTGATTGGCGGGCAAATCGCACCAGATCATGGTGAGATCCTTTTCGATGGTGAGAATATTCCGGCGATGTCTCGTTCGCGCCTGTATACAGTGCGCAAACGGATGAGCATGTTATTTCAGTCCGGGGCGTTGTTCACTGATATGAACGTATTTGACAACGTCGCCTATCCACTGCGCGAACATACCCAACTTCCCGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGCGTGACTTGTGTGGTGGTTTCTCACGATGTGCCGGAAGTGTTAAGTATTGCGGATCACGCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGATCTTTTACCAGGGAGTTAA", + "dna_sequence_length": 810, + "functions": [ + "ABC transporter maintaining OM lipid asymmetry, ATP-binding protein" + ], + "id": "CDS_3140", + "location": [ + [ + "NC_000913", + 3340065, + "-", + 810 + ] + ], + "md5": "1cdd4c58354e9744d6ccf5f0ff22f506", + "parent_gene": "", + "protein_md5": "c64901c38cc419fd95efac45ef8a5b3e", + "protein_translation": "MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010502" + ], + [ + "gene_synonym", + "ECK3185" + ], + [ + "gene_synonym", + "EcoGene:EG12802" + ], + [ + "gene_synonym", + "GI:16131086" + ], + [ + "gene_synonym", + "GeneID:947730" + ], + [ + "gene_synonym", + "JW3163" + ], + [ + "gene_synonym", + "NP_417663.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45394" + ], + [ + "gene_synonym", + "b3196" + ], + [ + "gene_synonym", + "yrbG" + ] + ], + "dna_sequence": "ATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTACCAGAAGTCATCGTCTCGCTTGCCGCGTCTCTGCACGAACAACGCGATTTAGCCGTTGGTACAGCCCTCGGCTCAAACATTATCAATATATTGCTGATCCTCGGTCTGGCTGCGCTGGTTCGTCCTTTTACCGTCCATTCTGATGTTCTACGCCGTGAATTACCCTTAATGTTGTTGGTCAGCGTGGTGGCCGGTTCCGTACTCTATGACGGACAACTTAGTCGCAGCGATGGTATCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGTTTTTATGGCTCGGCATTGCGCTTATCATCATGCCAGTGGCCACGCGGATGGTGGTTGATAACGCCACGGTGCTGGCGAATTACTTTGCCATCAGCGAGTTGACGATGGGTCTGACGGCAATTGCTATCGGAACCAGCCTGCCGGAACTGGCAACCGCAATAGCGGGGGTTCGCAAAGGTGAAAACGACATTGCTGTCGGAAATATCATTGGCGCAAACATTTTTAATATTGTCATCGTGTTGGGTTTACCCGCGCTGATAACGCCAGGAGAGATTGATCCACTGGCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGCTCCCCGCAACCGGGCCGTGGTGTAGGGGTATTATTAACTGGCGGATTTATCGTATGGCTGGCGATGTTGTACTGGTTATCGCCAATACTCGTTGAATAA", + "dna_sequence_length": 978, + "functions": [ + "putative calcium/sodium:proton antiporter" + ], + "id": "CDS_3141", + "location": [ + [ + "NC_000913", + 3340275, + "+", + 978 + ] + ], + "md5": "67b4f9bb85000247eb0c78db4ecca08a", + "parent_gene": "", + "protein_md5": "451703c97611612e1cca3fb94f78bc98", + "protein_translation": "MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTREQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010504" + ], + [ + "gene_synonym", + "ECK3186" + ], + [ + "gene_synonym", + "EcoGene:EG12803" + ], + [ + "gene_synonym", + "GI:16131087" + ], + [ + "gene_synonym", + "GeneID:947734" + ], + [ + "gene_synonym", + "JW3164" + ], + [ + "gene_synonym", + "NP_417664.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45395" + ], + [ + "gene_synonym", + "b3197" + ], + [ + "gene_synonym", + "kdsD" + ], + [ + "gene_synonym", + "yrbH" + ] + ], + "dna_sequence": "ATGTCGCACGTAGAGTTACAACCGGGTTTTGACTTTCAGCAAGCAGGTAAAGAAGTCCTGGCGATTGAACGTGAATGCCTGGCGGAGCTTGATCAATACATCAATCAGAATTTCACGCTTGCCTGTGAAAAGATGTTCTGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACACCTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCCCGGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTGCTGCGCGTAAACGATATTATGCATACGGGCGATGAGATCCCGCATGTTAAGAAAACGGCCAGTCTGCGTGACGCGTTGCTGGAAGTTACCCGCAAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAA", + "dna_sequence_length": 987, + "functions": [ + "D-arabinose 5-phosphate isomerase" + ], + "id": "CDS_3142", + "location": [ + [ + "NC_000913", + 3341266, + "+", + 987 + ] + ], + "md5": "c05c34c5e978a851a466d172a4589c8a", + "parent_gene": "", + "protein_md5": "6f1a50071c3b526adab8384d2f3d4af5", + "protein_translation": "MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010506" + ], + [ + "gene_synonym", + "ECK3187" + ], + [ + "gene_synonym", + "EcoGene:EG12804" + ], + [ + "gene_synonym", + "GI:16131088" + ], + [ + "gene_synonym", + "GeneID:947717" + ], + [ + "gene_synonym", + "JW3165" + ], + [ + "gene_synonym", + "NP_417665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABZ4" + ], + [ + "gene_synonym", + "b3198" + ], + [ + "gene_synonym", + "kdsC" + ], + [ + "gene_synonym", + "yrbI" + ], + [ + "gene_synonym", + "yrbJ" + ] + ], + "dna_sequence": "ATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTTCGTGACGGTTATGGCATTCGTTGTGCGCTCACCTCTGATATTGAAGTCGCTATCATTACCGGGCGAAAGGCTAAACTGGTAGAAGATCGTTGTGCCACATTGGGGATCACTCACTTGTATCAGGGGCAGTCAAACAAACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGA", + "dna_sequence_length": 567, + "functions": [ + "3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" + ], + "id": "CDS_3143", + "location": [ + [ + "NC_000913", + 3342273, + "+", + 567 + ] + ], + "md5": "b96c2c848591770e7834829262e4a25f", + "parent_gene": "", + "protein_md5": "f4baa5ce636807ed5876dbd3f737e4c6", + "protein_translation": "MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKLDEAKGQSI", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010508" + ], + [ + "gene_synonym", + "ECK3188" + ], + [ + "gene_synonym", + "EcoGene:EG12806" + ], + [ + "gene_synonym", + "GI:16131089" + ], + [ + "gene_synonym", + "GeneID:947722" + ], + [ + "gene_synonym", + "JW3166" + ], + [ + "gene_synonym", + "NP_417666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV9" + ], + [ + "gene_synonym", + "b3199" + ], + [ + "gene_synonym", + "lptC" + ], + [ + "gene_synonym", + "yrbK" + ] + ], + "dna_sequence": "ATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGATGATCGGCATTAATATGGCCGAAAAAGACGATACCGCCCAGGTGGTCGTCAACAACAATGATCCCACCTATAAAAGCGAGCATACGGACACGCTCGTCTATAACCCAGAAGGGGCACTAAGCTATCGATTGATTGCTCAACACGTTGAATATTATTCCGATCAGGCCGTTTCGTGGTTTACGCAGCCGGTACTTACCACGTTTGATAAGGATAAAATCCCGACATGGTCCGTAAAAGCAGATAAAGCCAAGCTGACCAATGACCGGATGCTCTATTTATATGGACACGTTGAAGTCAACGCACTTGTGCCAGACTCTCAACTTCGCAGAATCACGACGGATAACGCGCAGATCAATCTGGTGACGCAGGATGTTACCTCTGAAGACCTCGTCACGTTATACGGAACAACATTTAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACATCCTATGAAATTCAAAACAAACAAACTCAGCCTTAA", + "dna_sequence_length": 576, + "functions": [ + "periplasmic membrane-anchored LPS-binding protein", + "LPS export protein" + ], + "id": "CDS_3144", + "location": [ + [ + "NC_000913", + 3342836, + "+", + 576 + ] + ], + "md5": "6e6513915def6d56b81a5dc4ce8f88ee", + "parent_gene": "", + "protein_md5": "e7b335ee1a6eca37cc7ce70d47aeab74", + "protein_translation": "MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010510" + ], + [ + "gene_synonym", + "ECK3189" + ], + [ + "gene_synonym", + "EcoGene:EG12618" + ], + [ + "gene_synonym", + "GI:16131090" + ], + [ + "gene_synonym", + "GeneID:947920" + ], + [ + "gene_synonym", + "JW3167" + ], + [ + "gene_synonym", + "NP_417667.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV1" + ], + [ + "gene_synonym", + "b3200" + ], + [ + "gene_synonym", + "lptA" + ], + [ + "gene_synonym", + "yhbN" + ] + ], + "dna_sequence": "ATGAAATTCAAAACAAACAAACTCAGCCTTAATCTTGTGCTTGCCAGCTCACTTCTGGCCGCCAGCATTCCGGCATTTGCCGTAACCGGAGACACTGATCAGCCGATCCACATTGAATCGGACCAGCAATCTCTTGATATGCAAGGCAACGTGGTTACCTTTACCGGTAATGTCATCGTCACCCAGGGCACCATCAAAATTAATGCCGACAAAGTGGTCGTTACCCGTCCGGGCGGCGAACAAGGTAAAGAAGTGATTGACGGCTACGGTAAACCGGCAACGTTCTACCAGATGCAGGACAACGGTAAACCCGTTGAAGGTCACGCTTCCCAGATGCACTACGAACTGGCAAAAGATTTTGTCGTTCTGACGGGTAATGCTTATCTGCAGCAGGTCGATAGCAACATTAAGGGCGATAAGATCACTTACCTGGTGAAAGAGCAGAAAATGCAGGCTTTCAGCGACAAAGGCAAGCGCGTAACAACCGTTCTGGTGCCGTCGCAGCTGCAGGACAAAAACAACAAAGGCCAGACCCCGGCACAGAAGAAGGGTAATTAA", + "dna_sequence_length": 558, + "functions": [ + "lipopolysaccharide export ABC transporter periplasmic binding protein", + "Lipid A binding protein", + "LPS export and assembly protein" + ], + "id": "CDS_3145", + "location": [ + [ + "NC_000913", + 3343380, + "+", + 558 + ] + ], + "md5": "6dc11a40bb909355adaf02d8dc6e57bf", + "parent_gene": "", + "protein_md5": "9e16eff5a04c7b0ce378fdc814bd2127", + "protein_translation": "MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPAQKKGN", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010512" + ], + [ + "gene_synonym", + "ECK3190" + ], + [ + "gene_synonym", + "EcoGene:EG11680" + ], + [ + "gene_synonym", + "GI:16131091" + ], + [ + "gene_synonym", + "GeneID:947725" + ], + [ + "gene_synonym", + "JW3168" + ], + [ + "gene_synonym", + "NP_417668.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9V1" + ], + [ + "gene_synonym", + "b3201" + ], + [ + "gene_synonym", + "lptB" + ], + [ + "gene_synonym", + "yhbG" + ] + ], + "dna_sequence": "ATGGCAACATTAACTGCAAAGAACCTTGCAAAAGCCTATAAAGGCCGTCGCGTGGTAGAAGACGTCAGCCTGACCGTCAACTCCGGGGAAATTGTCGGTCTGCTGGGGCCAAACGGTGCCGGTAAGACCACCACTTTCTACATGGTTGTAGGCATTGTGCCGCGCGATGCGGGCAACATCATTATTGATGATGACGATATCAGTCTGCTGCCTCTGCATGCACGCGCGCGCCGCGGTATCGGCTATCTGCCACAGGAAGCCTCCATTTTCCGTCGCCTCAGCGTTTACGATAACCTGATGGCGGTACTGCAAATTCGTGACGACTTGTCTGCTGAACAACGTGAAGACCGCGCGAACGAGCTGATGGAAGAGTTTCACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAAATCTTACAAGACGAACACGTTAAGCGTGTATACCTTGGGGAAGACTTCAGACTCTGA", + "dna_sequence_length": 726, + "functions": [ + "lipopolysaccharide export ABC transporter ATPase" + ], + "id": "CDS_3146", + "location": [ + [ + "NC_000913", + 3343944, + "+", + 726 + ] + ], + "md5": "fc9e8123db886ef89678d4c4bd24e216", + "parent_gene": "", + "protein_md5": "5b94fca7e3e7cf91dbf3e34e22a4c66b", + "protein_translation": "MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFRL", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010514" + ], + [ + "gene_synonym", + "ECK3191" + ], + [ + "gene_synonym", + "EcoGene:EG10898" + ], + [ + "gene_synonym", + "GI:16131092" + ], + [ + "gene_synonym", + "GeneID:947714" + ], + [ + "gene_synonym", + "JW3169" + ], + [ + "gene_synonym", + "NP_417669.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24255" + ], + [ + "gene_synonym", + "b3202" + ], + [ + "gene_synonym", + "glnF" + ], + [ + "gene_synonym", + "ntrA" + ], + [ + "gene_synonym", + "rpoN" + ] + ], + "dna_sequence": "ATGAAGCAAGGTTTGCAACTCAGGCTTAGCCAACAACTGGCGATGACGCCACAGCTCCAACAGGCAATTCGTCTGTTGCAGTTGTCGACGCTGGAACTTCAGCAGGAGCTACAGCAGGCGCTGGAGAGTAATCCGCTGCTTGAGCAAATCGACACTCATGAAGAAATCGACACCCGCGAAACGCAAGACAGTGAAACGCTGGACACCGCCGACGCGCTCGAACAAAAAGAGATGCCGGAAGAGCTGCCGCTCGATGCCAGTTGGGACACCATTTACACCGCTGGTACACCATCCGGCACCAGCGGTGACTACATTGACGACGAGCTGCCGGTCTACCAGGGCGAAACGACGCAGACCTTGCAGGATTACCTGATGTGGCAGGTTGAGCTGACACCGTTTTCCGACACTGACCGCGCTATTGCTACCTCTATCGTCGATGCCGTTGATGAAACCGGTTATCTGACTGTCCCGCTGGAAGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCTTAAGCGGATCCAACGGTTTGATCCGGTCGGTGTGGCGGCAAAAGATCTGCGTGACTGTCTGCTGATCCAACTCTCCCAATTCGATAAGACCACGCCGTGGCTGGAAGAGGCCAGACTGATCATTAGCGATCATCTCGATCTGTTAGCCAATCACGACTTCCGCACTTTAATGCGCGTCACGCGTCTGAAAGAAGATGTGCTGAAAGAAGCCGTCAATCTGATCCAGTCGCTCGATCCGCGCCCCGGGCAGTCGATCCAGACTGGCGAACCTGAGTATGTCATTCCAGATGTGCTGGTGCGTAAGCATAACGGTCACTGGACGGTAGAACTCAACAGTGACAGCATTCCGCGTCTGCAAATCAACCAGCACTACGCCTCGATGTGCAATAACGCGCGCAACGATGGTGACAGCCAGTTTATCCGCAGCAATCTGCAGGATGCCAAATGGTTGATCAAGAGTCTGGAAAGCCGTAACGATACGCTACTGCGCGTGAGTCGCTGTATCGTTGAACAGCAGCAAGCCTTCTTTGAGCAAGGTGAAGAATATATGAAACCGATGGTACTGGCCGATATCGCCCAGGCTGTCGAAATGCATGAATCGACGATATCTCGCGTGACCACGCAAAAATACCTGCATAGTCCACGAGGCATTTTTGAACTGAAGTATTTCTTTTCCAGTCACGTCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTATCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGA", + "dna_sequence_length": 1434, + "functions": [ + "RNA polymerase, sigma 54 (sigma N) factor" + ], + "id": "CDS_3147", + "location": [ + [ + "NC_000913", + 3344717, + "+", + 1434 + ] + ], + "md5": "da12759cf891e1e17204f32a56da2ff7", + "parent_gene": "", + "protein_md5": "cd22b32ea00575d7ed99e863217ced58", + "protein_translation": "MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVPLEDILESIGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010516" + ], + [ + "gene_synonym", + "ECK3192" + ], + [ + "gene_synonym", + "EcoGene:EG11681" + ], + [ + "gene_synonym", + "GI:16131093" + ], + [ + "gene_synonym", + "GeneID:947718" + ], + [ + "gene_synonym", + "JW3170" + ], + [ + "gene_synonym", + "NP_417670.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFX0" + ], + [ + "gene_synonym", + "b3203" + ], + [ + "gene_synonym", + "hpf" + ], + [ + "gene_synonym", + "yhbH" + ] + ], + "dna_sequence": "ATGCAGCTCAACATTACCGGAAATAACGTCGAGATCACCGAGGCACTGCGCGAATTTGTTACAGCCAAATTTGCCAAACTTGAGCAATATTTTGACCGAATCAACCAGGTCTATGTTGTTCTGAAAGTGGAGAAAGTCACCCACACCTCAGATGCAACACTGCATGTAAACGGTGGTGAAATTCATGCCAGCGCGGAAGGTCAGGACATGTACGCTGCCATTGATGGCTTAATTGATAAGCTGGCACGCCAGTTGACCAAACATAAAGATAAACTGAAACAACACTAA", + "dna_sequence_length": 288, + "functions": [ + "ribosome hibernation promoting factor HPF", + "stabilizes 100S dimers" + ], + "id": "CDS_3148", + "location": [ + [ + "NC_000913", + 3346173, + "+", + 288 + ] + ], + "md5": "60f0eb3314ce47ced67405b5a7aa8733", + "parent_gene": "", + "protein_md5": "261ff6da90a7a3f692be0c00dde3dae7", + "protein_translation": "MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010520" + ], + [ + "gene_synonym", + "ECK3193" + ], + [ + "gene_synonym", + "EcoGene:EG11682" + ], + [ + "gene_synonym", + "GI:16131094" + ], + [ + "gene_synonym", + "GeneID:947721" + ], + [ + "gene_synonym", + "JW3171" + ], + [ + "gene_synonym", + "NP_417671.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69829" + ], + [ + "gene_synonym", + "b3204" + ], + [ + "gene_synonym", + "ptsN" + ], + [ + "gene_synonym", + "rpoP" + ], + [ + "gene_synonym", + "yhbI" + ] + ], + "dna_sequence": "ATGACAAATAATGATACAACTCTACAGCTTAGCAGTGTTCTTAACAGGGAATGTACGCGAAGCCGCGTCCACTGTCAGAGCAAAAAACGCGCCCTGGAAATCATCAGCGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTGAAGCTATCCTGACGCGGGAAAAAATGGGCAGTACCGGTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGCGTTTTCGTTCAGCTCGAAACGCCTATAGCTTTCGATGCCATCGACAACCAACCGGTGGACTTACTTTTTGCCCTGCTGGTGCCGGCAGACCAAACTAAAACGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAG", + "dna_sequence_length": 492, + "functions": [ + "sugar-specific enzyme IIA component of PTS" + ], + "id": "CDS_3149", + "location": [ + [ + "NC_000913", + 3346578, + "+", + 492 + ] + ], + "md5": "9728da9510651fa3c9f8c1829d15c3a3", + "parent_gene": "", + "protein_md5": "f8eabdac91826090bfcf6a2066a5dd80", + "protein_translation": "MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTPDEA", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010522" + ], + [ + "gene_synonym", + "ECK3194" + ], + [ + "gene_synonym", + "EcoGene:EG12146" + ], + [ + "gene_synonym", + "GI:16131095" + ], + [ + "gene_synonym", + "GeneID:947727" + ], + [ + "gene_synonym", + "JW3172" + ], + [ + "gene_synonym", + "NP_417672.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A894" + ], + [ + "gene_synonym", + "b3205" + ], + [ + "gene_synonym", + "rapZ" + ], + [ + "gene_synonym", + "yhbJ" + ] + ], + "dna_sequence": "ATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGATAACCTTCCCGTAGTGTTGTTACCCGATCTGGCTCGAACCCTGGCCGATCGCGAGATTTCTGCCGCCGTCAGCATTGATGTTCGTAATATGCCGGAGTCACCAGAAATATTCGAACAGGCGATGAGTAACCTGCCTGACGCTTTCTCACCGCAACTCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTACCTATGCTGGAAACCAACAACCGTAGCTACTTGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGTCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGA", + "dna_sequence_length": 855, + "functions": [ + "adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated", + "NTPase" + ], + "id": "CDS_3150", + "location": [ + [ + "NC_000913", + 3347115, + "+", + 855 + ] + ], + "md5": "ac7bf62edd590a4f63afd09b617ab845", + "parent_gene": "", + "protein_md5": "5bb437dfbbabba6e96122e3e5bd18614", + "protein_translation": "MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010524" + ], + [ + "gene_synonym", + "ECK3195" + ], + [ + "gene_synonym", + "EcoGene:EG12147" + ], + [ + "gene_synonym", + "GI:16131096" + ], + [ + "gene_synonym", + "GeneID:947914" + ], + [ + "gene_synonym", + "JW3173" + ], + [ + "gene_synonym", + "NP_417673.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N0" + ], + [ + "gene_synonym", + "b3206" + ], + [ + "gene_synonym", + "npr" + ], + [ + "gene_synonym", + "ptsO" + ], + [ + "gene_synonym", + "rpoR" + ], + [ + "gene_synonym", + "yhbK" + ] + ], + "dna_sequence": "ATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAA", + "dna_sequence_length": 273, + "functions": [ + "phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)" + ], + "id": "CDS_3151", + "location": [ + [ + "NC_000913", + 3347966, + "+", + 273 + ] + ], + "md5": "4a8f22d932946ab25790121594d2b2ae", + "parent_gene": "", + "protein_md5": "f957fc3f45621e04f1c53152aea9a048", + "protein_translation": "MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010528" + ], + [ + "gene_synonym", + "ECK3196" + ], + [ + "gene_synonym", + "EcoGene:EG12807" + ], + [ + "gene_synonym", + "GI:16131097" + ], + [ + "gene_synonym", + "GeneID:947910" + ], + [ + "gene_synonym", + "JW3174" + ], + [ + "gene_synonym", + "NP_417674.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64610" + ], + [ + "gene_synonym", + "b3207" + ], + [ + "gene_synonym", + "yrbL" + ] + ], + "dna_sequence": "ATGATTCGCTTATCTGAACAAAGTCCCCTGGGCACCGGAAGACATCGGAAATGTTATGCGCATCCGGAAGATGCCCAACGCTGTATCAAGATTGTCTACCATCGTGGCGATGGTGGCGATAAAGAGATCCGCCGTGAGTTAAAGTACTACGCGCATCTTGGTCGCCGGTTAAAAGACTGGAGTGGAATACCGCGCTATCACGGTACCGTTGAGACGGATTGCGGAACCGGTTATGTCTACGATGTGATTGCAGATTTTGACGGCAAGCCTTCCATTACGCTGACCGAATTTGCTGAACAATGCCGTTACGAAGAAGACATTGCACAACTGCGCCAGCTACTGAAACAGCTGAAGCGTTATTTGCAGGATAACCGTATCGTGACGATGTCGCTGAAGCCGCAGAATATCCTCTGTCACCGCATCAGTGAGTCAGAGGTTATCCCGGTCGTCTGCGACAACATTGGTGAAAGCACATTGATTCCACTGGCGACCTGGTCGAAGTGGTGTTGTCTGCGTAAGCAAGAGCGGTTATGGAAACGATTTATCGCCCAACCGGCGCTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAA", + "dna_sequence_length": 633, + "functions": [ + "Mg(2+)-starvation-stimulated protein" + ], + "id": "CDS_3152", + "location": [ + [ + "NC_000913", + 3348452, + "+", + 633 + ] + ], + "md5": "cad854afc87e6bf90698db722767958d", + "parent_gene": "", + "protein_md5": "6aa8c3f6bc3d4c9b66bfec303e76f0f9", + "protein_translation": "MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010530" + ], + [ + "gene_synonym", + "ECK3197" + ], + [ + "gene_synonym", + "EcoGene:EG12808" + ], + [ + "gene_synonym", + "GI:16131098" + ], + [ + "gene_synonym", + "GeneID:947728" + ], + [ + "gene_synonym", + "JW3175" + ], + [ + "gene_synonym", + "NP_417675.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46022" + ], + [ + "gene_synonym", + "b3208" + ], + [ + "gene_synonym", + "mgt" + ], + [ + "gene_synonym", + "mtgA" + ], + [ + "gene_synonym", + "yrbM" + ] + ], + "dna_sequence": "ATGAGTAAAAGCCGCTTAACGGTGTTTAGTTTCGTTCGCCGTTTTCTTTTGCGGTTAATGGTTGTCCTCGCCGTTTTCTGGGGCGGGGGCATCGCGTTGTTTAGCGTTGCGCCTGTTCCCTTCTCAGCGGTAATGGTCGAGCGACAGGTCAGCGCCTGGCTGCATGGCAATTTTCGTTACGTGGCACATTCTGACTGGGTCAGTATGGATCAAATCTCGCCGTGGATGGGACTGGCGGTGATTGCCGCAGAAGATCAGAAATTTCCTGAGCACTGGGGCTTTGATGTCGCTTCCATTGAGAAAGCCCTGGCGCACAACGAGCGCAATGAAAACCGTATTCGCGGTGCTTCAACGATTTCTCAACAGACAGCCAAAAATCTCTTTTTATGGGATGGGCGTAGCTGGGTTCGAAAAGGGCTGGAAGCCGGATTAACGCTGGGGATAGAAACGGTCTGGAGCAAAAAGCGTATCCTGACGGTTTACCTGAATATCGCCGAATTTGGCGACGGTGTGTTTGGCGTCGAAGCTGCGGCACAACGTTATTTCCACAAACCCGCGAGCAAACTTACCCGGTCGGAAGCTGCATTACTGGCAGCTGTATTACCTAATCCACTTCGTTTCAAAGTCTCCTCGCCATCGGGCTACGTGCGTAGCCGTCAGGCGTGGATTTTACGGCAGATGTATCAGTTAGGCGGTGAGCCGTTTATGCAACAACACCAGCTGGATTAA", + "dna_sequence_length": 729, + "functions": [ + "biosynthetic peptidoglycan transglycosylase" + ], + "id": "CDS_3153", + "location": [ + [ + "NC_000913", + 3349809, + "-", + 729 + ] + ], + "md5": "df4caeb59347982a0483242d0ddc4e6a", + "parent_gene": "", + "protein_md5": "58e1f9af0b98ce4caf583eb75bababe8", + "protein_translation": "MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAVMVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEKALAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTVYLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRSRQAWILRQMYQLGGEPFMQQHQLD", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010532" + ], + [ + "gene_synonym", + "ECK3198" + ], + [ + "gene_synonym", + "EcoGene:EG11383" + ], + [ + "gene_synonym", + "GI:90111557" + ], + [ + "gene_synonym", + "GeneID:947903" + ], + [ + "gene_synonym", + "JW3176" + ], + [ + "gene_synonym", + "NP_417676.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU5" + ], + [ + "gene_synonym", + "b3209" + ], + [ + "gene_synonym", + "elb2" + ], + [ + "gene_synonym", + "elbB" + ], + [ + "gene_synonym", + "yhbL" + ], + [ + "gene_synonym", + "yzzB" + ] + ], + "dna_sequence": "ATGAAGAAAATTGGCGTAATTCTGAGCGGATGCGGCGTCTATGACGGTTCTGAAATTCATGAAGCGGTGTTGACGTTGTTAGCTATTTCACGCAGCGGTGCGCAGGCGGTCTGCTTTGCACCGGATAAGCAGCAGGTTGATGTTATCAACCATTTAACTGGCGAAGCGATGACGGAAACGCGCAATGTGCTGATTGAAGCGGCACGAATAACGCGCGGTGAAATCCGTCCTCTGGCCCAGGCCGATGCCGCTGAACTGGATGCGTTGATTGTGCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATTTTGCCAGTCTTGGTAGCGAATGCACCGTTGACCGTGAATTAAAGGCGCTGGCACAAGCGATGCATCAGGCCGGAAAACCGCTTGGTTTTATGTGTATTGCCCCGGCGATGCTGCCGAAAATTTTCGATTTCCCGCTGCGTTTGACCATCGGTACTGATATCGATACCGCAGAAGTGCTGGAAGAGATGGGCGCGGAGCATGTGCCGTGTCCTGTCGATGATATCGTGGTTGATGAAGACAATAAGATTGTCACCACCCCAGCATATATGCTGGCGCAGAACATTGCAGAAGCGGCGAGCGGCATTGATAAGCTGGTTTCCCGCGTGCTGGTTCTGGCTGAATGA", + "dna_sequence_length": 654, + "functions": [ + "isoprenoid biosynthesis protein with amidotransferase-like domain" + ], + "id": "CDS_3154", + "location": [ + [ + "NC_000913", + 3350459, + "-", + 654 + ] + ], + "md5": "e640d70ed592e8e10bb96b3267303a64", + "parent_gene": "", + "protein_md5": "0b0d87592956d7cb8c345679bc86a9ec", + "protein_translation": "MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010537" + ], + [ + "gene_synonym", + "ECK3200" + ], + [ + "gene_synonym", + "EcoGene:EG10062" + ], + [ + "gene_synonym", + "GI:49176326" + ], + [ + "gene_synonym", + "GeneID:947887" + ], + [ + "gene_synonym", + "JW5536" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC3" + ], + [ + "gene_synonym", + "YP_026207.1" + ], + [ + "gene_synonym", + "arcB" + ], + [ + "gene_synonym", + "b3210" + ] + ], + "dna_sequence": "ATGAAGCAAATTCGTCTGCTGGCGCAGTATTATGTTGACCTGATGATGAAGTTAGGTCTGGTGCGCTTCTCAATGTTGCTGGCGCTGGCCCTCGTCGTTCTTGCCATTGTGGTACAAATGGCGGTAACCATGGTGCTGCATGGTCAGGTCGAAAGCATTGATGTTATTCGTTCTATCTTCTTTGGTTTGCTGATTACGCCGTGGGCGGTCTACTTTCTATCGGTGGTCGTCGAGCAACTGGAGGAGTCACGACAACGTCTGTCACGGCTGGTGCAAAAACTGGAGGAGATGCGCGAGCGCGATTTGAGCCTCAACGTTCAGTTAAAAGATAATATTGCCCAGCTAAATCAGGAAATTGCCGTTCGTGAAAAAGCGGAAGCAGAACTGCAGGAAACCTTCGGCCAACTGAAAATTGAAATCAAAGAGCGCGAAGAGACACAAATTCAGCTCGAGCAGCAATCCTCATTCTTACGTTCCTTCCTTGATGCTTCACCCGACCTGGTTTTTTATCGTAACGAAGATAAAGAGTTTTCCGGCTGTAACCGCGCGATGGAGCTGCTGACCGGAAAAAGCGAAAAACAACTGGTTCACCTGAAACCTGCTGATGTTTACTCACCGGAAGCCGCCGCAAAAGTCATTGAAACCGATGAAAAAGTGTTCCGTCATAATGTGTCACTGACCTATGAACAGTGGCTGGATTACCCGGACGGGCGCAAAGCCTGCTTTGAAATCCGTAAAGTGCCGTACTACGACCGCGTGGGTAAACGTCACGGTTTGATGGGCTTTGGTCGCGACATTACCGAGCGTAAGCGGTATCAGGATGCGCTTGAACGGGCCAGCCGCGACAAAACGACGTTTATCTCCACCATCAGTCACGAATTGCGTACACCGCTGAACGGTATCGTCGGTCTGAGCCGCATTCTGCTGGATACCGAACTCACCGCCGAGCAGGAAAAATATCTCAAGACCATCCATGTTTCGGCCGTCACGCTGGGGAATATCTTTAACGATATTATCGACATGGATAAGATGGAACGGCGCAAGGTCCAGCTTGATAATCAACCGGTTGATTTCACCAGCTTCCTTGCCGATCTGGAAAATCTCTCCGCATTGCAGGCGCAACAAAAAGGATTGCGCTTTAACCTGGAGCCGACGCTGCCATTACCGCATCAGGTCATTACCGACGGGACGCGTTTACGGCAGATCCTGTGGAACCTCATCAGTAACGCCGTCAAATTCACCCAGCAAGGCCAGGTTACCGTGCGCGTGCGCTACGATGAAGGCGATATGCTGCATTTTGAAGTGGAAGACTCTGGTATCGGCATTCCGCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACAGGGCAAAGGTTCAACCTTTACGTTGACGATCCACGCACCGTCGGTAGCAGAAGAGGTCGATGATGCGTTTGATGAAGACGATATGCCTTTACCGGCGCTGAATGTGCTGCTGGTGGAAGACATTGAACTGAACGTGATTGTTGCGCGTTCTGTGCTGGAAAAATTAGGTAACAGCGTTGATGTCGCCATGACCGGCAAGGCGGCGCTGGAGATGTTTAAACCGGGCGAATACGACCTGGTGTTGCTGGATATTCAGTTGCCAGATATGACCGGGCTGGATATCTCTCGTGAACTGACGAAACGTTATCCGCGCGAGGATTTACCGCCGCTGGTGGCCTTAACCGCTAACGTGCTGAAAGACAAACAAGAGTACCTCAATGCTGGAATGGATGATGTGCTGAGTAAGCCGCTTTCTGTTCCGGCGCTAACCGCGATGATCAAGAAATTCTGGGATACCCAGGATGATGAGGAGAGTACGGTGACGACAGAAGAGAACAGTAAATCAGAAGCATTGCTCGATATTCCCATGCTGGAACAGTATCTCGAACTTGTAGGACCGAAGCTGATCACCGACGGGTTAGCGGTGTTTGAGAAGATGATGCCGGGCTATGTCAGCGTGCTGGAGTCGAATCTGACGGCGCAGGATAAAAAAGGCATTGTTGAGGAAGGACATAAAATTAAAGGTGCGGCGGGGTCAGTGGGGTTACGCCATCTGCAACAGCTGGGTCAGCAAATTCAGTCTCCTGACCTTCCGGCCTGGGAAGATAACGTCGGTGAATGGATTGAAGAGATGAAAGAAGAGTGGCGTCACGACGTAGAAGTGCTGAAAGCGTGGGTGGCAAAAGCCACTAAAAAATGA", + "dna_sequence_length": 2337, + "functions": [ + "aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB" + ], + "id": "CDS_3155", + "location": [ + [ + "NC_000913", + 3353025, + "-", + 2337 + ] + ], + "md5": "580de0e851745add42432604aa17c9f8", + "parent_gene": "", + "protein_md5": "194ab80cc2a4c255030c3792403ba6b2", + "protein_translation": "MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK", + "protein_translation_length": 778, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010540" + ], + [ + "gene_synonym", + "ECK3201" + ], + [ + "gene_synonym", + "EcoGene:EG12809" + ], + [ + "gene_synonym", + "GI:16131101" + ], + [ + "gene_synonym", + "GeneID:947733" + ], + [ + "gene_synonym", + "JW3178" + ], + [ + "gene_synonym", + "NP_417678.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADW6" + ], + [ + "gene_synonym", + "b3211" + ], + [ + "gene_synonym", + "yhcC" + ] + ], + "dna_sequence": "ATGCAGTTACAGAAATTAGTCAATATGTTTGGTGGTGATCTCACCCGTCGTTATGGGCAAAAGGTGCATAAGCTGACGCTGCACGGCGGTTTTAGCTGCCCTAACCGTGACGGTACCATCGGGCGTGGTGGCTGCACATTCTGTAATGTTGCCTCGTTTGCCGATGAAGCGCAGCAGCATCGTTCCATTGCCGAGCAACTGGCGCACCAGGCGAATTTAGTTAACCGCGCTAAACGCTATCTGGCCTACTTTCAGGCGTATACCAGCACCTTTGCGGAAGTTCAGGTGCTGCGTTCTATGTATCAGCAGGCGGTGAGCCAGGCCAATATTGTCGGTTTGTGTGTGGGTACCCGCCCGGACTGCGTGCCGGATGCGGTGCTGGATCTGCTTTGCGAATATAAGGACCAGGGTTACGAAGTGTGGCTGGAGCTGGGGCTACAAACCGCCCACGACAAAACACTGCATCGCATCAACCGCGGCCATGATTTTGCCTGTTATCAGCGTACAACCCAGCTGGCACGTCAGCGCGGGCTGAAGGTGTGTTCCCACTTAATTGTCGGCCTGCCTGGCGAAGGGCAGGCTGAATGTTTGCAAACGCTGGAGCGAGTGGTTGAAACCGGCGTGGACGGCATAAAGCTGCATCCGCTGCATATTGTGAAAGGCAGCATTATGGCGAAAGCCTGGGAAGCGGGGCGTTTGAACGGTATTGAACTGGAGGATTACACGCTCACTGCCGGAGAAATGATTCGCCATACGCCACCGGAAGTGATCTACCACCGCATTTCCGCCAGCGCCCGTCGCCCGACGCTGCTTGCTCCGCTGTGGTGCGAAAATCGATGGACGGGAATGGTCGAGCTGGATCGCTATCTGAATGAACATGGCGTACAGGGATCGGCGCTGGGACGTCCGTGGCTACCTCCAACGGAGTAG", + "dna_sequence_length": 930, + "functions": [ + "putative Fe-S oxidoreductase, Radical SAM superfamily protein" + ], + "id": "CDS_3156", + "location": [ + [ + "NC_000913", + 3354050, + "-", + 930 + ] + ], + "md5": "e287e19d6d711d3f93f4bdadd400f14b", + "parent_gene": "", + "protein_md5": "386e027e457f0b95276ef25a571eff4e", + "protein_translation": "MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010545" + ], + [ + "gene_synonym", + "ECK3202" + ], + [ + "gene_synonym", + "EcoGene:EG10403" + ], + [ + "gene_synonym", + "GI:308209621" + ], + [ + "gene_synonym", + "GeneID:947724" + ], + [ + "gene_synonym", + "JW3179" + ], + [ + "gene_synonym", + "NP_417679.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09831" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "b3212" + ], + [ + "gene_synonym", + "gltB" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "psiQ" + ] + ], + "dna_sequence": "ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGATGGTAAAACCGGCGACGGTTGCGGCTTGCTGTTACAAAAACCGGATCGCTTTTTTCGCATCGTTGCGCAGGAGCGCGGCTGGCGTTTAGCAAAAAACTACGCTGTCGGGATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAATCGCCCTCTCCTCTCTGCCACGCATTGAGCAAATTTTTGTGAACGCCCCGGCAGGCTGGCGTCCACGCGATATGGAGCGCCGTCTGTTTATCGCCCGCCGCCGCATTGAAAAGCGTCTCGAAGCCGACAAAGACTTCTACGTCTGTAGCCTGTCGAATCTGGTGAACATCTATAAAGGTCTGTGTATGCCGACGGATCTGCCGCGCTTTTATCTGGATCTTGCGGACCTGCGTCTGGAATCGGCCATTTGCCTGTTCCACCAGCGCTTCTCCACTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGGTAACCGCCAATGGGCGCGTGCGCGTACTTATAAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCCCGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCATCACCAAAGATAAGCTCATCACCTGCGCCTCTGAAGTCGGTATCTGGGATTACCAGCCTGACGAAGTGGTCGAAAAAGGCCGCGTCGGGCCAGGCGAACTGATGGTTATCGACACCCGCAGTGGGCGTATTCTGCACTCGGCAGAAACCGATGACGATCTGAAAAGCCGCCATCCATATAAAGAGTGGATGGAGAAAAACGTCCGCCGACTGGTACCGTTTGAAGATCTGCCCGATGAAGAAGTGGGTAGCCGCGAACTGGACGACGACACGCTTGCCAGCTACCAGAAACAGTTTAACTACAGCGCGGAAGAGCTGGACTCCGTAATTCGCGTACTGGGCGAAAACGGTCAGGAAGCGGTCGGTTCGATGGGCGATGATACCCCATTCGCCGTGCTCTCCAGTCAGCCGCGCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGATTTCAAACAGCTCACGACGATGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGAAACCGCCAGCGCCCGCGATCCGCACCACTTCGCCGTGTTGCTGGGCTTCGGCGCGACGGCTATTTATCCATACCTTGCCTATGAAACGCTGGGCCGCCTGGTAGACACCCATGCGATTGCCAAAGATTATCGTACCGTGATGCTCAACTACCGTAACGGCATCAACAAAGGCTTGTACAAAATCATGTCCAAAATGGGCATCTCCACCATCGCCTCTTACCGCTGCTCGAAACTGTTTGAAGCGGTCGGTCTACACGATGATGTAGTGGGCCTGTGCTTCCAGGGGGCGGTCAGCCGCATTGGTGGAGCAAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTGCCTGGCTGGCGCGTAAGCCCATCAGCCAGGGCGGTCTGCTGAAATACGTCCACGGCGGCGAATACCACGCCTACAACCCGGACGTGGTGCGCACGCTGCAACAAGCGGTACAAAGCGGCGAGTACAGCGACTATCAGGAATACGCGAAGCTGGTTAATGAGCGTCCGGCAACCACGCTGCGCGATCTGCTGGCAATTACGCCGGGTGAAAACGCGGTCAACATTGCTGATGTTGAACCGGCAAGCGAACTGTTTAAACGCTTTGATACCGCCGCGATGTCTATCGGCGCGTTAAGCCCGGAAGCCCACGAGGCGCTGGCGGAAGCGATGAACAGCATCGGCGGTAATTCGAACTCCGGTGAAGGCGGCGAAGACCCGGCGCGCTACGGCACCAACAAAGTGTCGCGCATCAAGCAGGTGGCTTCCGGTCGCTTTGGGGTTACTCCGGCGTATCTGGTCAATGCCGACGTCATTCAGATTAAAGTCGCCCAGGGCGCGAAGCCAGGCGAAGGCGGTCAGTTGCCGGGTGATAAAGTCACGCCTTACATCGCCAAACTGCGCTATTCGGTGCCCGGAGTGACGCTGATCTCCCCGCCGCCGCACCACGATATCTACTCTATCGAGGACTTAGCGCAGCTCATTTTCGACCTCAAGCAGGTTAACCCGAAAGCGATGATCTCCGTGAAGCTGGTTTCCGAACCGGGAGTAGGCACCATCGCGACTGGCGTGGCAAAAGCTTATGCGGACTTGATCACCATCGCAGGCTATGACGGCGGCACCGGCGCAAGTCCGCTTTCATCGGTGAAATACGCAGGCTGTCCGTGGGAGCTGGGGCTTGTTGAAACCCAGCAGGCGCTGGTTGCTAACGGCTTGCGTCACAAGATCCGTTTGCAGGTCGATGGCGGCCTGAAAACGGGTGTCGATATCATCAAGGCGGCGATTCTCGGCGCAGAAAGCTTCGGCTTCGGCACTGGCCCGATGGTGGCGCTCGGCTGTAAATATCTACGTATTTGCCATCTGAACAACTGCGCAACGGGTGTAGCAACTCAGGATGACAAACTGCGTAAGAACCACTATCACGGCCTGCCATTCAAGGTGACGAATTACTTTGAGTTTATCGCCCGTGAAACCCGCGAGCTGATGGCACAGCTTGGCGTAACACGTCTGGTGGATCTGATTGGTCGCACCGACCTGCTGAAAGAGCTGGACGGTTTCACCGCCAAACAGCAGAAGCTGGCGCTGTCGAAGCTGCTGGAGACTGCCGAACCGCATCCAGGTAAGGCACTCTACTGCACCGAAAACAACCCGCCGTTTGATAACGGCCTGCTGAACGCGCAGTTGCTGCAACAGGCGAAACCGTTTGTCGATGAGCGCCAGAGCAAAACCTTCTGGTTCGATATTCGCAACACCGACCGTTCTGTCGGCGCGTCGCTTTCAGGCTATATCGCCCAGACGCACGGCGATCAGGGGCTGGCAGCCGATCCTATCAAAGCGTACTTCAACGGCACCGCAGGCCAGAGCTTCGGCGTGTGGAACGCGGGCGGCGTGGAACTGTACCTGACCGGTGATGCCAACGACTATGTCGGTAAAGGCATGGCGGGCGGCTTAATCGCCATTCGTCCTCCGGTTGGTTCCGCCTTCCGCAGCCATGAAGCAAGCATTATCGGCAACACCTGCCTGTATGGCGCGACCGGTGGTCGTCTGTATGCCGCAGGCCGCGCGGGTGAACGTTTCGGCGTGCGTAACTCCGGTGCTATCACCGTGGTAGAAGGCATTGGCGACAACGGTTGTGAATATATGACGGGTGGTATCGTCTGCATTCTGGGTAAAACCGGCGTTAACTTCGGTGCGGGCATGACCGGCGGTTTCGCTTACGTTCTCGATGAAAGCGGCGATTTCCGCAAACGCGTTAACCCGGAACTGGTCGAGGTCTTAAGCGTTGACGCTCTGGCGATCCATGAAGAGCATCTGCGTGGTCTTATCACCGAGCATGTGCAGCATACCGGCTCTCAGCGCGGTGAAGAGATTCTGGCGAACTGGTCAACCTTCGCCACTAAATTTGCGCTGGTTAAACCGAAGTCCAGTGATGTAAAAGCACTGCTGGGTCACCGTAGTCGTAGCGCAGCTGAGTTGCGCGTGCAGGCGCAGTAA", + "dna_sequence_length": 4461, + "functions": [ + "glutamate synthase, large subunit" + ], + "id": "CDS_3157", + "location": [ + [ + "NC_000913", + 3354725, + "+", + 4461 + ] + ], + "md5": "48bd98579663fa1bf1c3d08907bb8c13", + "parent_gene": "", + "protein_md5": "8d3ca885fcf8569e84aca6864ab563a1", + "protein_translation": "MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPTDLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ", + "protein_translation_length": 1486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010547" + ], + [ + "gene_synonym", + "ECK3203" + ], + [ + "gene_synonym", + "EcoGene:EG10404" + ], + [ + "gene_synonym", + "GI:16131103" + ], + [ + "gene_synonym", + "GeneID:947723" + ], + [ + "gene_synonym", + "JW3180" + ], + [ + "gene_synonym", + "NP_417680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09832" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "b3213" + ], + [ + "gene_synonym", + "gltD" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "psiQ" + ] + ], + "dna_sequence": "ATGAGTCAGAATGTTTATCAATTTATCGACCTGCAGCGCGTTGATCCGCCAAAGAAACCGCTGAAGATCCGCAAAATTGAGTTTGTTGAAATTTACGAGCCGTTTTCCGAAGGCCAGGCCAAAGCGCAGGCTGACCGCTGCCTGTCGTGCGGCAACCCATACTGCGAGTGGAAATGCCCGGTACACAACTACATCCCGAACTGGCTGAAGCTCGCCAACGAGGGGCGTATTTTTGAAGCGGCGGAACTGTCGCACCAGACCAACACCCTGCCGGAAGTTTGCGGACGAGTCTGCCCGCAAGACCGTCTGTGCGAAGGTTCCTGCACTCTGAACGATGAGTTTGGCGCGGTGACCATCGGCAACATTGAGCGCTATATCAACGATAAAGCGTTCGAGATGGGCTGGCGTCCGGATATGTCTGGTGTGAAACAGACCGGTAAAAAAGTGGCGATTATCGGCGCAGGCCCGGCAGGTCTGGCGTGTGCGGATGTCCTGACGCGTAACGGCGTAAAAGCCGTTGTCTTCGACCGTCATCCAGAAATTGGCGGGCTGCTGACCTTCGGTATTCCGGCCTTCAAGCTGGAAAAAGAGGTAATGACGCGTCGCCGTGAAATCTTCACCGGCATGGGTATTGAATTCAAACTCAATACCGAAGTGGGCCGCGACGTACAGCTGGACGATCTGCTGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAACACCAAACAGTTAATGGGCTTTGGTGAAACCCGCGACGAACCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTCCCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGCAGATGCGGTGATCATGGCGTTTGGTTTCCGTCCACACAACATGGAATGGCTGGCAAAACACAGCGTCGAGCTGGATTCACAAGGCCGCATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAA", + "dna_sequence_length": 1419, + "functions": [ + "glutamate synthase, 4Fe-4S protein, small subunit" + ], + "id": "CDS_3158", + "location": [ + [ + "NC_000913", + 3359198, + "+", + 1419 + ] + ], + "md5": "5178d8de129ea7afd33463e01e01811b", + "parent_gene": "", + "protein_md5": "5af2fdc9ce6e4da36f79f1557c99fa94", + "protein_translation": "MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWLEV", + "protein_translation_length": 472, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010549" + ], + [ + "gene_synonym", + "ECK3204" + ], + [ + "gene_synonym", + "EcoGene:EG11514" + ], + [ + "gene_synonym", + "GI:16131104" + ], + [ + "gene_synonym", + "GeneID:947746" + ], + [ + "gene_synonym", + "JW3181" + ], + [ + "gene_synonym", + "NP_417681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28721" + ], + [ + "gene_synonym", + "b3214" + ], + [ + "gene_synonym", + "gltF" + ], + [ + "gene_synonym", + "ossB" + ] + ], + "dna_sequence": "ATGTTTTTCAAAAAGAACCTCACAACAGCTGCTATTTGTGCAGCACTTTCTGTTGCAGCATTCAGTGCCATGGCAACAGATTCAACTGATACAGAATTAACTATCATCGGCGAGTATACCCCTGGTGCATGTACCCCAGTTGTTACGGGCGGCGGCATTGTTGACTATGGGAAACATCATAACAGTGCGCTGAATCCGACCGGTAAAAGTAATAAACTGGTTCAACTGGGCCGCAAAAACAGCACATTAAATATAACCTGCACAGCACCAACGCTAATTGCTGTAACCTCCAAGGATAACCGTCAGTCGACCATTGTAGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAA", + "dna_sequence_length": 765, + "functions": [ + "periplasmic protein" + ], + "id": "CDS_3159", + "location": [ + [ + "NC_000913", + 3361176, + "+", + 765 + ] + ], + "md5": "3d8aa7f6aa795816fe3d55c16d3e820d", + "parent_gene": "", + "protein_md5": "8ac83ad509ec54e5dc677b8bdc2e6c61", + "protein_translation": "MFFKKNLTTAAICAALSVAAFSAMATDSTDTELTIIGEYTPGACTPVVTGGGIVDYGKHHNSALNPTGKSNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAYDTLVDMKGTKNAFGLGSAPNGQKIGAASIGIDRSNGGIHAADDTGEIPVDLIQTDHWSAATPTWKASSNGAFCSLTSCSAIERGYSVAKTGELTPVAITAVTFPLLIDAAVNDNTILGSDETIKLDGNVTISVQYL", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010552" + ], + [ + "gene_synonym", + "ECK3205" + ], + [ + "gene_synonym", + "EcoGene:EG11515" + ], + [ + "gene_synonym", + "GI:16131105" + ], + [ + "gene_synonym", + "GeneID:947741" + ], + [ + "gene_synonym", + "JW3182" + ], + [ + "gene_synonym", + "NP_417682.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28722" + ], + [ + "gene_synonym", + "b3215" + ], + [ + "gene_synonym", + "yhcA" + ] + ], + "dna_sequence": "ATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGTTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACACCACCATTGTTGATTTGCCTGAAAGCAATAAATCAATTCGTTTAATCCCGACTCAGCCCGTTATTCGTGTTGAAGCCGGTCAAGTACAACAGGTTCGATTTTTACTTCAGGCGACTGTTCCTCTGCAATCAGAAGAGCTGAAACGCGTAACGTTCGAAGGTATTCCACCAAAAGATGACAAGAGCAGCAGAGTTACTGTTTCAATTCGTCAGGATCTACCTGTACTGATCCACCCGGCTTCCCTGCCGGAAGAGCGAGAGACCTGGAAATTCCTGGAATGGCGTAAAAATGGCGACCAAATTGAGATTAGCAACCCCAGTAATTATGTCGTTCGTATGACCTTACAATTTAAAACGCTCCCTTCAGGAAAAACGGGGGCTATAAATAAGACCTATTTTCTACCACACACCAGTACAACTACTGCATTAACAAACGCTACGGATACAAAAGTCGAGTTTTACCCAGCCAGCCGATATGGTTATCGCGGTAATAAATATGTCACTGACTTAAAATAA", + "dna_sequence_length": 675, + "functions": [ + "putative periplasmic chaperone protein" + ], + "id": "CDS_3160", + "location": [ + [ + "NC_000913", + 3362112, + "+", + 675 + ] + ], + "md5": "006f58693708927fb98112d89a4c2ae8", + "parent_gene": "", + "protein_md5": "71a933af378f94e33fadd2a9289bd6e0", + "protein_translation": "MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010554" + ], + [ + "gene_synonym", + "ECK3206" + ], + [ + "gene_synonym", + "EcoGene:EG12810" + ], + [ + "gene_synonym", + "GI:16131106" + ], + [ + "gene_synonym", + "GeneID:947738" + ], + [ + "gene_synonym", + "JW3183" + ], + [ + "gene_synonym", + "NP_417683.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45420" + ], + [ + "gene_synonym", + "b3216" + ], + [ + "gene_synonym", + "yhcD" + ] + ], + "dna_sequence": "ATGTTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTGCGCTGCTAAACTACTCTCTGATGAGCAGCCGTGCAGAATTTTCTAATGGGAGTTCGGACTACTCCCAGGCTGCACTTGAAGGCGGGATTAATATTAATGACTGGATGTTACGCAGCCATCAGTTCCTTACACAAACAAATGGCACATTCAGTAACCAGAACTCGTCAACCTACCTTCAACGTACCTTTACAGATCTTAAAACACTCATGCGAGCAGGTGAAGTTAACCTCAATAATAGCGTGTTGGAAGGAGCCAGTATTTACGGTATCGAAATCGCACCGGACAACGCATTGCAAACCAGCGGCAGTGGTGTGCAAGTTACTGGTATAGCCAACACCTCTCAGGCTCGTGTCGAGATTCGTCAACAAGGAGTTTTAATTCATTCCATTCTGGTTCCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCCGGTCGAGTCTGGTTCCCCTGCCCGATTTAACAGTGAGCAGCCAAATTAGTACATCGCAGGATACGAAAGACTCACTGCAAGGACAGAAATATCGTCTTGACGCGAACTACAATCTCCCATTTTCACTTGGGCTAACAACCAGCCTCACTCGATCTGATCGCCATTATCGCGAACTGTCTGAAGCGATTGATGATGATTATACCGATCCGACTAAAAGCACTTATGCGCTTGGTTTAAACTGGTCTAACTCCATTCTGGGTGGTTTCAACATCAGTGGCTATAAAACATATAGTTACGACGGTGACAATGACTCAAGCAACCTTAATATTAACTGGAACAAAGCGTTCAAACACGCCACGGTTTCCGTCAACTGGCAGCATCAACTTAGTGCTTCAGAAAATAATGAAGACGATGGTGATCTGTTCTACGTCAACATCAGTATTCCATTTGGCAGATCAAACACCGCCACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGA", + "dna_sequence_length": 2382, + "functions": [ + "putative outer membrane fimbrial subunit usher protein" + ], + "id": "CDS_3161", + "location": [ + [ + "NC_000913", + 3362807, + "+", + 2382 + ] + ], + "md5": "db7d97cbb54ea0be79e8db6c77a19965", + "parent_gene": "", + "protein_md5": "842aef92aa45d076900102c61261a51e", + "protein_translation": "MLKKTLLAYTIGFAFSPPANADGIEIAAVDFDRETLKSLGVDPNISHYFSRSARFLPGEYSLIVSVNGEKKGNIATRFDENGDICLDQAFLQQAGLKIPSEEKNGCYDYILSYPGTTITPLPNQEALDIIVSPQAIIPIGLDLTNAATGGTAALLNYSLMSSRAEFSNGSSDYSQAALEGGININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDLKTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQGVLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGYRFAIGRVDDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPDLTVSSQISTSQDTKDSLQGQKYRLDANYNLPFSLGLTTSLTRSDRHYRELSEAIDDDYTDPTKSTYALGLNWSNSILGGFNISGYKTYSYDGDNDSSNLNINWNKAFKHATVSVNWQHQLSASENNEDDGDLFYVNISIPFGRSNTATLYTRHDDHKTHYGTGVMGVVSDEMSYYVNAERDHDERETSLNGSISSNLHYTQVSLAAGASGSDSRTYNGTMSGGIAVHDQGVTFSPWTINDTFAIAKMDNNIAGVRITSQAGPVWTDFRGNAVIPSIQPWRTSGVEIDTASLPKNVDIGNGTKMIKQGRGAVGKVGFSAITQRRALLNITLSDGKKLPRGVAIEDSEGNYLTTSVDDGVVFLNNIKPDMVLDIKDEQQSCRIHLTFPEDAPKDVFYETATGECQ", + "protein_translation_length": 793, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010556" + ], + [ + "gene_synonym", + "ASAP:ABE-0285070" + ], + [ + "gene_synonym", + "ASAP:ABE-0285102" + ], + [ + "gene_synonym", + "ECK3207" + ], + [ + "gene_synonym", + "EcoGene:EG12811" + ], + [ + "gene_synonym", + "GeneID:4056032" + ], + [ + "gene_synonym", + "JW3184" + ], + [ + "gene_synonym", + "JW3187" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45421" + ], + [ + "gene_synonym", + "b4569" + ], + [ + "gene_synonym", + "yhcE" + ] + ], + "dna_sequence": "ATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAATGGTTCATTAAATCTGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGTACTTCCCCCAATAATTGGCTGGTGTTTATGCAAAATGGTCAAGAAGTGGTAATTGATAGCGGTAAAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGA", + "dna_sequence_length": 546, + "id": "CDS_3162", + "location": [ + [ + "NC_000913", + 3365185, + "+", + 367 + ], + [ + "NC_000913", + 3366751, + "+", + 179 + ] + ], + "md5": "5e13755129c14a0d526d212f62aea93a", + "parent_gene": "", + "protein_md5": "f0556894c4199c1157e8714f49ff9eb1", + "protein_translation": "MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010559" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16131108" + ], + [ + "gene_synonym", + "GeneID:947743" + ], + [ + "gene_synonym", + "NP_417685.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE57" + ], + [ + "gene_synonym", + "b3218" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_3163", + "location": [ + [ + "NC_000913", + 3366718, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010564" + ], + [ + "gene_synonym", + "ECK3208" + ], + [ + "gene_synonym", + "EcoGene:EG12812" + ], + [ + "gene_synonym", + "GI:16131109" + ], + [ + "gene_synonym", + "GeneID:947735" + ], + [ + "gene_synonym", + "JW3188" + ], + [ + "gene_synonym", + "NP_417686.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45422" + ], + [ + "gene_synonym", + "b3219" + ], + [ + "gene_synonym", + "yhcF" + ] + ], + "dna_sequence": "ATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACAACGCGCTTATTCGGCTTAGGGAAAACAAAAGATAATAAAAATATCGGTAGTTATGCCGTGTTAATTGATAGCAACAACATTAGTGCCAGCAATGGTAGCCAGACGTTAGCTGTATCAATAGCAGGTGCAGATGCCGTCATAACAGGGCAAAAAAGAGCATGGCAAACGCTCACCGCTTATCCGCTTGCAGTCGATCAAAGCTATTATTACACCTTTGTAAAACCAGGTGAAACAACCCCAACTCCTGTAACGAACGCCATTATACCGCTTCAGGTGAGCGCATCTATCGCGAATGATTTAGGCGGTTCAGAAAAAATCGAACTTGATGGGAAAGCTGTGATAAGCGTAGTCTACTTGTGA", + "dna_sequence_length": 717, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_3164", + "location": [ + [ + "NC_000913", + 3366926, + "+", + 717 + ] + ], + "md5": "efc18809f1c59dd791d3a0ef061a1d8f", + "parent_gene": "", + "protein_md5": "9d227e91f40487aec287306f3218866a", + "protein_translation": "MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010567" + ], + [ + "gene_synonym", + "ECK3209" + ], + [ + "gene_synonym", + "EcoGene:EG12813" + ], + [ + "gene_synonym", + "GI:16131110" + ], + [ + "gene_synonym", + "GeneID:947739" + ], + [ + "gene_synonym", + "JW3189" + ], + [ + "gene_synonym", + "NP_417687.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45423" + ], + [ + "gene_synonym", + "b3220" + ], + [ + "gene_synonym", + "yhcG" + ] + ], + "dna_sequence": "ATGGAATCGCTCTCAGAAGGAACCACAGCAGGCTACCAGCAAATCCACGACGGTATTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGACGCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTTAAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAATCCGATTTTGAGGAGGCGCTGATCAACCACCTGATGGATTTCATGCTGGAACTTGGGGATGATTTTGCCTTTGTTGGTCGGCAGCGAAGGTTACGCATTGATGACAACTGGTTTCGTGTCGATCTGCTGTTTTTCCACCGCCGTTTACGCTGCCTGCTAATCGTCGATCTAAAAGTGGGCAAATTCAGCTATAGCGATGCCGGACAGATGAATATGTATCTCAACTACGCCAAAGAGCACTGGACGCTACCGGATGAAAATCCGCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAA", + "dna_sequence_length": 1128, + "functions": [ + "DUF1016 family protein in the PD-(D/E)XK nuclease superfamily" + ], + "id": "CDS_3165", + "location": [ + [ + "NC_000913", + 3367827, + "+", + 1128 + ] + ], + "md5": "62e56f038b49787db0d8e786cc68e6d4", + "parent_gene": "", + "protein_md5": "99bf9f3bbf46967ca87141c987dc3cb2", + "protein_translation": "MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010569" + ], + [ + "gene_synonym", + "ECK3210" + ], + [ + "gene_synonym", + "EcoGene:EG12814" + ], + [ + "gene_synonym", + "GI:16131111" + ], + [ + "gene_synonym", + "GeneID:947750" + ], + [ + "gene_synonym", + "JW3190" + ], + [ + "gene_synonym", + "NP_417688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45424" + ], + [ + "gene_synonym", + "b3221" + ], + [ + "gene_synonym", + "yhcH" + ] + ], + "dna_sequence": "ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCTGGGTTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGCTGCCAGACCGCAAGAAAAAGCGCCGGGTCGTTACGAATTACAGGGCGACAATATCTTTATGAATGTCATGACGTTTAACACTCAATCGCCCGTCGAGAAAAAAGCGGAATTGCACGAGCAATACATTGATATCCAGCTGTTATTAAACGGTGAGGAACGGATTCTGTTTGGCATGGCAGGCACTGCGCGTCAGTGTGAAGAGTTCCACCATGAGGATGATTATCAGCTTTGCAGCACCATTGATAACGAGCAAGCCATCATCTTAAAACCGGGAATGTTCGCCGTGTTTATGCCAGGTGAACCGCATAAACCAGGATGCGTTGTCGGCGAGCCTGGAGAGATTAAAAAGGTTGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA", + "dna_sequence_length": 465, + "functions": [ + "DUF386 family protein, cupin superfamily" + ], + "id": "CDS_3166", + "location": [ + [ + "NC_000913", + 3369478, + "-", + 465 + ] + ], + "md5": "4ae1c041e48b15fbca90b37636728d10", + "parent_gene": "", + "protein_md5": "67388c685c9907204af0f852b1362933", + "protein_translation": "MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010571" + ], + [ + "gene_synonym", + "ECK3211" + ], + [ + "gene_synonym", + "EcoGene:EG12815" + ], + [ + "gene_synonym", + "GI:90111558" + ], + [ + "gene_synonym", + "GeneID:947757" + ], + [ + "gene_synonym", + "JW5538" + ], + [ + "gene_synonym", + "NP_417689.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45425" + ], + [ + "gene_synonym", + "b3222" + ], + [ + "gene_synonym", + "nanK" + ], + [ + "gene_synonym", + "yhcI" + ] + ], + "dna_sequence": "ATGACCACACTGGCGATTGATATCGGCGGTACTAAACTTGCCGCCGCGCTGATTGGCGCTGACGGGCAGATCCGCGATCGTCGTGAACTTCCTACGCCAGCCAGCCAGACACCAGAAGCCTTGCGTGATGCCTTATCCGCATTAGTCTCTCCGTTGCAAGCTCATGCGCAGCGGGTTGCCATCGCTTCGACCGGGATAATCCGTGACGGCAGCTTGCTGGCGCTTAATCCGCATAATCTTGGTGGATTGCTACACTTTCCGTTAGTCAAAACGCTGGAACAACTTACCAATTTGCCGACCATTGCCATTAACGACGCGCAGGCCGCAGCATGGGCGGAGTTTCAGGCGCTGGATGGCGATATAACCGATATGGTCTTTATCACCGTTTCCACCGGCGTTGGCGGCGGTGTAGTGAGCGGCTGCAAACTGCTTACCGGCCCTGGCGGTCTGGCGGGGCATATCGGGCATACGCTTGCCGATCCACACGGCCCAGTCTGCGGCTGTGGACGCACAGGTTGCGTGGAAGCGATTGCTTCTGGTCGCGGCATTGCAGCGGCAGCGCAGGGGGAGTTGGCTGGCGCGGATGCGAAAACTATTTTCACGCGCGCCGGGCAGGGTGACGAGCAGGCGCAGCAGCTGATTCACCGCTCCGCACGTACGCTTGCAAGGCTGATCGCTGATATTAAAGCCACAACTGATTGCCAGTGCGTGGTGGTCGGTGGCAGCGTTGGTCTGGCAGAAGGGTATCTGGCGCTGGTGGAAACGTATCTGGCGCAGGAGCCAGCGGCATTTCATGTTGATTTACTGGCGGCGCATTACCGCCATGATGCAGGTTTACTTGGGGCTGCGCTGTTGGCCCAGGGAGAAAAATTATGA", + "dna_sequence_length": 876, + "functions": [ + "N-acetylmannosamine kinase" + ], + "id": "CDS_3167", + "location": [ + [ + "NC_000913", + 3370350, + "-", + 876 + ] + ], + "md5": "2b3fda4755b24ae0def24e4635fa6fb7", + "parent_gene": "", + "protein_md5": "e53821ca4ede87a7a00588cae24a337d", + "protein_translation": "MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010575" + ], + [ + "gene_synonym", + "ECK3212" + ], + [ + "gene_synonym", + "EcoGene:EG12816" + ], + [ + "gene_synonym", + "GI:16131113" + ], + [ + "gene_synonym", + "GeneID:947745" + ], + [ + "gene_synonym", + "JW3192" + ], + [ + "gene_synonym", + "NP_417690.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A761" + ], + [ + "gene_synonym", + "b3223" + ], + [ + "gene_synonym", + "nanE" + ], + [ + "gene_synonym", + "yhcJ" + ] + ], + "dna_sequence": "ATGTCGTTACTTGCACAACTGGATCAAAAAATCGCTGCTAACGGTGGCCTGATTGTCTCCTGCCAGCCGGTTCCGGACAGCCCGCTCGATAAACCCGAAATCGTCGCCGCCATGGCATTAGCGGCAGAACAGGCGGGCGCGGTTGCCATTCGCATTGAAGGTGTGGCAAATCTGCAAGCCACGCGTGCGGTGGTGAGCGTGCCGATTATTGGAATTGTGAAACGCGATCTGGAGGATTCTCCGGTACGCATCACGGCCTATATTGAAGATGTTGATGCGCTGGCGCAGGCGGGCGCGGACATTATCGCCATTGACGGCACCGACCGCCCGCGTCCGGTGCCTGTTGAAACGCTGCTGGCACGTATTCACCATCACGGTTTACTGGCGATGACCGACTGCTCAACGCCGGAAGACGGCCTGGCATGCCAAAAGCTGGGAGCCGAAATTATTGGCACTACGCTTTCTGGCTATACCACGCCTGAAACGCCAGAAGAGCCGGATCTGGCGCTGGTGAAAACGTTGAGCGACGCCGGATGTCGGGTGATTGCCGAAGGGCGTTACAACACGCCTGCTCAGGCGGCGGATGCGATGCGCCACGGCGCGTGGGCGGTGACGGTCGGTTCTGCAATCACGCGTCTTGAGCACATTTGTCAGTGGTACAACACAGCGATGAAAAAGGCGGTGCTATGA", + "dna_sequence_length": 690, + "functions": [ + "putative N-acetylmannosamine-6-P epimerase" + ], + "id": "CDS_3168", + "location": [ + [ + "NC_000913", + 3371036, + "-", + 690 + ] + ], + "md5": "09f7173484a2af133d50f076e5475345", + "parent_gene": "", + "protein_md5": "6d009ab9d5f35a3f58241b7a35cf21ac", + "protein_translation": "MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010577" + ], + [ + "gene_synonym", + "ECK3213" + ], + [ + "gene_synonym", + "EcoGene:EG20145" + ], + [ + "gene_synonym", + "GI:90111559" + ], + [ + "gene_synonym", + "GeneID:947740" + ], + [ + "gene_synonym", + "JW3193" + ], + [ + "gene_synonym", + "NP_417691.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41036" + ], + [ + "gene_synonym", + "b3224" + ], + [ + "gene_synonym", + "nanT" + ] + ], + "dna_sequence": "ATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTGCACAATGGCGCGCATTTTCCGCTGCCTGGTTGGGATATCTGCTTGACGGTTTTGATTTCGTTTTAATCGCCCTGGTACTCACCGAAGTACAAGGTGAATTCGGGCTGACGACGGTGCAGGCGGCAAGTCTGATCTCTGCAGCCTTTATCTCTCGCTGGTTCGGCGGCCTGATGCTCGGCGCTATGGGTGACCGCTACGGGCGTCGTCTGGCAATGGTCACCAGCATCGTTCTCTTCTCGGCCGGGACGCTGGCCTGCGGCTTTGCGCCAGGCTACATCACCATGTTTATCGCTCGTCTGGTCATCGGCATGGGGATGGCGGGTGAATACGGTTCCAGCGCCACCTATGTCATTGAAAGCTGGCCAAAACATCTGCGTAACAAAGCCAGTGGTTTTTTGATTTCAGGCTTCTCTGTGGGGGCCGTCGTTGCCGCTCAGGTCTATAGCCTGGTGGTTCCGGTCTGGGGCTGGCGTGCGCTGTTCTTTATCGGCATTTTGCCAATCATCTTTGCTCTCTGGCTGCGTAAAAACATCCCGGAAGCGGAAGACTGGAAAGAGAAACACGCAGGTAAAGCACCAGTACGCACAATGGTGGATATTCTCTACCGTGGTGAACATCGCATTGCCAATATCGTAATGACACTGGCGGCGGCTACTGCGCTGTGGTTCTGCTTCGCCGGTAACCTGCAAAATGCCGCGATCGTCGCTGTTCTTGGGCTGTTATGCGCCGCAATCTTTATCAGCTTTATGGTGCAGAGTGCAGGCAAACGCTGGCCAACGGGCGTAATGCTGATGGTGGTCGTGTTGTTTGCTTTCCTCTACTCATGGCCGATTCAGGCGCTGCTGCCAACGTATCTGAAAACCGATCTGGCTTATAACCCGCATACTGTAGCCAATGTGCTGTTCTTTAGTGGCTTTGGCGCGGCGGTGGGATGCTGCGTAGGTGGCTTCCTCGGTGACTGGCTGGGAACCCGCAAAGCGTACGTTTGTAGCCTGCTGGCCTCGCAGCTGCTGATTATTCCGGTATTTGCGATTGGCGGCGCAAACGTCTGGGTGCTCGGTCTGTTACTGTTCTTCCAGCAAATGCTTGGACAAGGGATCGCCGGGATCTTACCAAAACTGATTGGCGGTTATTTCGATACCGACCAGCGTGCAGCGGGCCTGGGCTTTACCTACAACGTTGGCGCATTGGGCGGTGCACTGGCCCCAATCATCGGCGCGTTGATCGCTCAACGTCTGGATCTGGGTACTGCGCTGGCATCGCTCTCGTTCAGTCTGACGTTCGTGGTGATCCTGCTGATTGGGCTGGATATGCCTTCTCGCGTTCAGCGTTGGTTGCGCCCGGAAGCGTTGCGTACTCATGACGCTATCGACGGTAAACCATTCAGCGGTGCCGTGCCGTTTGGCAGCGCCAAAAACGATTTAGTCAAAACCAAAAGTTAA", + "dna_sequence_length": 1491, + "functions": [ + "sialic acid transporter" + ], + "id": "CDS_3169", + "location": [ + [ + "NC_000913", + 3372574, + "-", + 1491 + ] + ], + "md5": "c9690d348d439491f2a87e6456e99d0c", + "parent_gene": "", + "protein_md5": "41a833559634f29dc05fe8bf01d37bdf", + "protein_translation": "MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLTEVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLACGFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILYRGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSAGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS", + "protein_translation_length": 496, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010579" + ], + [ + "gene_synonym", + "ECK3214" + ], + [ + "gene_synonym", + "EcoGene:EG10637" + ], + [ + "gene_synonym", + "GI:16131115" + ], + [ + "gene_synonym", + "GeneID:947742" + ], + [ + "gene_synonym", + "JW3194" + ], + [ + "gene_synonym", + "NP_417692.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6L4" + ], + [ + "gene_synonym", + "b3225" + ], + [ + "gene_synonym", + "nanA" + ], + [ + "gene_synonym", + "npl" + ] + ], + "dna_sequence": "ATGGCAACGAATTTACGTGGCGTAATGGCTGCACTCCTGACTCCTTTTGACCAACAACAAGCACTGGATAAAGCGAGTCTGCGTCGCCTGGTTCAGTTCAATATTCAGCAGGGCATCGACGGTTTATACGTGGGTGGTTCGACCGGCGAGGCCTTTGTACAAAGCCTTTCCGAGCGTGAACAGGTACTGGAAATCGTCGCCGAAGAGGCGAAAGGTAAGATTAAACTCATCGCCCACGTCGGTTGCGTCAGCACCGCCGAAAGCCAACAACTTGCGGCATCGGCTAAACGTTATGGCTTCGATGCCGTCTCCGCCGTCACGCCGTTCTACTATCCTTTCAGCTTTGAAGAACACTGCGATCACTATCGGGCAATTATTGATTCGGCGGATGGTTTGCCGATGGTGGTGTACAACATTCCAGCCCTGAGTGGGGTAAAACTGACCCTGGATCAGATCAACACACTTGTTACATTGCCTGGCGTAGGTGCGCTGAAACAGACCTCTGGCGATCTCTATCAGATGGAGCAGATCCGTCGTGAACATCCTGATCTTGTGCTCTATAACGGTTACGACGAAATCTTCGCCTCTGGTCTGCTGGCGGGCGCTGATGGTGGTATCGGCAGTACCTACAACATCATGGGCTGGCGCTATCAGGGGATCGTTAAGGCGCTGAAAGAAGGCGATATCCAGACCGCGCAGAAACTGCAAACTGAATGCAATAAAGTCATTGATTTACTGATCAAAACGGGCGTATTCCGCGGCCTGAAAACTGTCCTCCATTATATGGATGTCGTTTCTGTGCCGCTGTGCCGCAAACCGTTTGGACCGGTAGATGAAAAATATCTGCCAGAACTGAAGGCGCTGGCCCAGCAGTTGATGCAAGAGCGCGGGTGA", + "dna_sequence_length": 894, + "functions": [ + "N-acetylneuraminate lyase" + ], + "id": "CDS_3170", + "location": [ + [ + "NC_000913", + 3373576, + "-", + 894 + ] + ], + "md5": "09dc1c889d681b9cc6ee6e78621ac469", + "parent_gene": "", + "protein_md5": "8c6264609850a1927d3dae67989bc9cb", + "protein_translation": "MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010584" + ], + [ + "gene_synonym", + "ECK3215" + ], + [ + "gene_synonym", + "EcoGene:EG12817" + ], + [ + "gene_synonym", + "GI:49176329" + ], + [ + "gene_synonym", + "GeneID:945468" + ], + [ + "gene_synonym", + "JW3195" + ], + [ + "gene_synonym", + "NP_417693.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8W0" + ], + [ + "gene_synonym", + "b3226" + ], + [ + "gene_synonym", + "nanR" + ], + [ + "gene_synonym", + "yhcK" + ] + ], + "dna_sequence": "ATGGGCCTTATGAACGCATTTGATTCGCAAACCGAAGATTCTTCACCTGCAATTGGTCGCAACTTGCGTAGCCGCCCGCTGGCGCGTAAAAAACTCTCCGAAATGGTGGAAGAAGAGCTGGAACAGATGATCCGCCGTCGTGAATTTGGCGAAGGTGAACAATTACCGTCTGAACGCGAACTGATGGCGTTCTTTAACGTCGGGCGTCCTTCGGTGCGTGAAGCGCTGGCAGCGTTAAAACGCAAAGGTCTGGTGCAAATAAACAACGGCGAACGCGCTCGCGTCTCGCGTCCTTCTGCGGACACTATCATCGGTGAGCTTTCCGGCATGGCGAAAGATTTCCTTTCTCATCCCGGTGGGATTGCCCATTTCGAACAATTACGTCTGTTCTTTGAATCCAGTCTGGTGCGCTATGCGGCTGAACATGCCACCGATGAGCAAATCGATTTGCTGGCAAAAGCACTGGAAATCAACAGTCAGTCGCTGGATAACAACGCGGCATTCATTCGTTCAGACGTTGATTTCCACCGCGTGCTGGCGGAGATCCCCGGTAACCCAATCTTCATGGCGATCCACGTTGCCCTGCTCGACTGGCTTATTGCCGCACGCCCAACGGTTACCGATCAGGCACTGCACGAACATAACAACGTTAGTTATCAACAGCATATTGCGATCGTTGATGCGATCCGCCGTCATGATCCTGACGAAGCCGATCGTGCGTTGCAATCGCATCTCAACAGCGTCTCTGCTACCTGGCACGCTTTCGGTCAGACCACCAACAAAAAGAAATAA", + "dna_sequence_length": 792, + "functions": [ + "sialic acid-inducible nan operon repressor" + ], + "id": "CDS_3171", + "location": [ + [ + "NC_000913", + 3374489, + "-", + 792 + ] + ], + "md5": "a785ba7b773fbac26219011e02c91221", + "parent_gene": "", + "protein_md5": "f045ac8532b007ba5d1d09a74fe1186e", + "protein_translation": "MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010589" + ], + [ + "gene_synonym", + "ECK3216" + ], + [ + "gene_synonym", + "EcoGene:EG12818" + ], + [ + "gene_synonym", + "GI:16131117" + ], + [ + "gene_synonym", + "GeneID:946575" + ], + [ + "gene_synonym", + "JW3196" + ], + [ + "gene_synonym", + "NP_417694.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45428" + ], + [ + "gene_synonym", + "b3227" + ], + [ + "gene_synonym", + "dcuD" + ], + [ + "gene_synonym", + "yhcL" + ] + ], + "dna_sequence": "ATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGATATTTATAATGAAATCCTGCGCATGCTGTCCAACCGCATTGCCGGATTGGGGCTGTCGATTATGGCGGTGGGCGGTTATGCCCGCTACATGGAGCGCATAGGGGCCAGTCGCGCGATGGTGAGCTTGTTAAGCCGCCCGTTAAAACTCATTCGCTCGCCGTATATTATTCTGTCGGCAACTTACGTCATCGGCCAAATCATGGCGCAGTTTATTACCAGCGCCTCCGGTCTGGGTATGTTGCTGATGGTCACCTTATTTCCGACGCTGGTGAGTCTGGGAGTAAGTCGTCTCTCTGCGGTGGCAGTTATCGCAACCACGATGTCCATTGAGTGGGGGATTCTGGAAACGAACTCCATTTTTGCTGCCCAGGTAGCGGGAATGAAAATTGCCACATACTTCTTCCACTACCAGCTTCCGGTCGCCTCTTGCGTCATTATCTCGGTGGCGATCTCCCACTTTTTCGTGCAACGCGCTTTTGACAAAAAAGATAAAAATATCAATCACGAACAGGCAGAGCAAAAAGCTCTCGATAATGTCCCGCCGCTCTATTACGCCATTTTACCTGTGATGCCGTTAATCCTGATGCTCGGCTCGCTGTTCCTCGCCCACGTCGGGCTGATGCAGTCAGAACTGCATCTGGTGGTGGTGATGTTACTGAGTTTGACTGTGACGATGTTTGTTGAGTTCTTCCGCAAGCATAACTTGCGCGAAACAATGGACGATGTGCAGGCGTTTTTTGACGGCATGGGTACGCAGTTTGCCAACGTGGTAACGCTGGTGGTCGCGGGTGAAATATTTGCGAAAGGCTTAACGACGATTGGCACTGTCGATGCGGTTATCAGGGGGGCGGAGCATTCTGGTCTGGGCGGTATTGGCGTGATGATTATTATGGCGCTGGTCATTGCCATTTGTGCCATTGTGATGGGCTCTGGCAATGCGCCGTTTATGTCATTTGCCAGTCTTATTCCGAATATCGCAGCCGGACTACATGTACCAGCGGTTGTAATGATTATGCCGATGCATTTTGCCACGACGCTAGCGCGCGCGGTTTCGCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAA", + "dna_sequence_length": 1368, + "functions": [ + "putative transporter" + ], + "id": "CDS_3172", + "location": [ + [ + "NC_000913", + 3374869, + "+", + 1368 + ] + ], + "md5": "ff72d95fe992357f86ee0460afb06ca3", + "parent_gene": "", + "protein_md5": "39097d4807df3d2ffc8cced7a0aea629", + "protein_translation": "MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMDDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVTSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY", + "protein_translation_length": 455, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010591" + ], + [ + "gene_synonym", + "ECK3217" + ], + [ + "gene_synonym", + "EcoGene:EG10978" + ], + [ + "gene_synonym", + "GI:16131118" + ], + [ + "gene_synonym", + "GeneID:944774" + ], + [ + "gene_synonym", + "JW3197" + ], + [ + "gene_synonym", + "NP_417695.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFZ3" + ], + [ + "gene_synonym", + "b3228" + ], + [ + "gene_synonym", + "sspB" + ] + ], + "dna_sequence": "ATGGATTTGTCACAGCTAACACCACGTCGTCCCTATCTGCTGCGTGCATTCTATGAGTGGTTGCTGGATAACCAGCTCACGCCGCACCTGGTGGTGGATGTGACGCTCCCTGGCGTGCAGGTTCCTATGGAATATGCGCGTGACGGGCAAATCGTACTCAACATTGCGCCGCGTGCTGTCGGCAATCTGGAACTGGCGAATGATGAGGTGCGCTTTAACGCGCGCTTTGGTGGCATTCCGCGTCAGGTTTCTGTGCCGCTGGCTGCCGTGCTGGCTATCTACGCCCGTGAAAATGGCGCAGGCACGATGTTTGAGCCTGAAGCTGCCTACGATGAAGATACCAGCATCATGAATGATGAAGAGGCATCGGCAGACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAA", + "dna_sequence_length": 498, + "functions": [ + "ClpXP protease specificity enhancing factor" + ], + "id": "CDS_3173", + "location": [ + [ + "NC_000913", + 3376776, + "-", + 498 + ] + ], + "md5": "061ec03ab6550a3a415c82ce9d026c79", + "parent_gene": "", + "protein_md5": "0344807a9a3d95e3bb0f87f63128f377", + "protein_translation": "MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPALRVVK", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010594" + ], + [ + "gene_synonym", + "ECK3218" + ], + [ + "gene_synonym", + "EcoGene:EG10977" + ], + [ + "gene_synonym", + "GI:16131119" + ], + [ + "gene_synonym", + "GeneID:944744" + ], + [ + "gene_synonym", + "JW3198" + ], + [ + "gene_synonym", + "NP_417696.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACA3" + ], + [ + "gene_synonym", + "b3229" + ], + [ + "gene_synonym", + "pog" + ], + [ + "gene_synonym", + "ssp" + ], + [ + "gene_synonym", + "sspA" + ] + ], + "dna_sequence": "ATGGCTGTCGCTGCCAACAAACGTTCGGTAATGACGCTGTTTTCCGGTCCTACTGACATCTATAGCCATCAGGTCCGCATTGTGCTGGCTGAGAAAGGTGTAAGTTTCGAGATCGAACACGTGGAAAAGGACAATCCGCCTCAGGATCTGATTGACCTCAACCCGAATCAGAGCGTTCCGACCCTGGTGGATCGTGAGCTGACCCTGTGGGAATCTCGCATCATTATGGAATATCTGGATGAGCGTTTCCCGCATCCGCCACTGATGCCTGTTTACCCGGTAGCTCGCGGTGAAAGCCGTCTGTACATGCATCGCATCGAAAAAGACTGGTACACGCTGATGAACACCATCATCAACGGTTCAGCTTCTGAAGCAGATGCCGCACGTAAGCAACTGCGCGAAGAACTGCTGGCGATTGCGCCGGTCTTCGGTCAGAAGCCGTACTTCCTGAGCGATGAGTTCAGCCTGGTCGATTGCTATCTTGCTCCGCTGCTGTGGCGTCTGCCGCAACTGGGCATCGAGTTCAGCGGCCCGGGTGCGAAAGAGCTGAAAGGCTATATGACCCGCGTCTTTGAGCGTGACTCTTTCCTTGCTTCTTTAACTGAAGCAGAACGTGAAATGCGTCTGGGCCGGAGTTAA", + "dna_sequence_length": 639, + "functions": [ + "stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog" + ], + "id": "CDS_3174", + "location": [ + [ + "NC_000913", + 3377420, + "-", + 639 + ] + ], + "md5": "0cfc02d80d6c8ebbba590ea5b86b0b02", + "parent_gene": "", + "protein_md5": "b07f5eb7a050c52d00c36de294a6ba3f", + "protein_translation": "MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010597" + ], + [ + "gene_synonym", + "ECK3219" + ], + [ + "gene_synonym", + "EcoGene:EG10908" + ], + [ + "gene_synonym", + "GI:16131120" + ], + [ + "gene_synonym", + "GeneID:949000" + ], + [ + "gene_synonym", + "JW3199" + ], + [ + "gene_synonym", + "NP_417697.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7X3" + ], + [ + "gene_synonym", + "b3230" + ], + [ + "gene_synonym", + "rpsI" + ] + ], + "dna_sequence": "ATGGCTGAAAATCAATACTACGGCACTGGTCGCCGCAAAAGTTCCGCAGCTCGCGTTTTCATCAAACCGGGCAACGGTAAAATCGTAATCAACCAACGTTCTCTGGAACAGTACTTCGGTCGTGAAACTGCCCGCATGGTAGTTCGTCAGCCGCTGGAACTGGTCGACATGGTTGAGAAACTGGACCTGTACATCACCGTTAAAGGTGGTGGTATCTCTGGTCAGGCTGGTGCGATCCGTCACGGTATCACCCGCGCTCTGATGGAATACGACGAGTCCCTGCGTTCTGAACTGCGTAAAGCTGGCTTCGTTACTCGTGACGCTCGTCAGGTTGAACGTAAGAAAGTCGGTCTGCGTAAAGCACGTCGTCGTCCGCAGTTCTCCAAACGTTAA", + "dna_sequence_length": 393, + "functions": [ + "30S ribosomal subunit protein S9" + ], + "id": "CDS_3175", + "location": [ + [ + "NC_000913", + 3378207, + "-", + 393 + ] + ], + "md5": "a42fa8756ef9bd6064788b92fefc71dd", + "parent_gene": "", + "protein_md5": "7e83a2f8447b1a959eb026f7a47d4917", + "protein_translation": "MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010599" + ], + [ + "gene_synonym", + "ECK3220" + ], + [ + "gene_synonym", + "EcoGene:EG10874" + ], + [ + "gene_synonym", + "GI:16131121" + ], + [ + "gene_synonym", + "GeneID:947828" + ], + [ + "gene_synonym", + "JW3200" + ], + [ + "gene_synonym", + "NP_417698.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA10" + ], + [ + "gene_synonym", + "b3231" + ], + [ + "gene_synonym", + "rplM" + ] + ], + "dna_sequence": "ATGAAAACTTTTACAGCTAAACCAGAAACCGTAAAACGCGACTGGTATGTTGTTGACGCGACCGGTAAAACTCTGGGCCGTCTGGCTACTGAACTGGCTCGTCGCCTGCGCGGTAAGCACAAAGCGGAATACACTCCGCACGTAGATACCGGTGATTACATCATCGTTCTGAACGCTGACAAAGTTGCTGTAACCGGCAACAAGCGTACTGACAAAGTGTACTATCACCACACCGGCCACATCGGTGGTATCAAACAAGCGACCTTTGAAGAGATGATTGCTCGCCGTCCTGAGCGTGTGATTGAAATCGCGGTTAAAGGCATGTTGCCAAAAGGCCCGCTGGGTCGTGCTATGTTCCGTAAACTGAAAGTTTACGCGGGTAACGAGCACAACCACGCGGCACAGCAACCGCAAGTTCTTGACATCTAA", + "dna_sequence_length": 429, + "functions": [ + "50S ribosomal subunit protein L13" + ], + "id": "CDS_3176", + "location": [ + [ + "NC_000913", + 3378651, + "-", + 429 + ] + ], + "md5": "037e55f28ec9eeaf23257fa36a8d5cfc", + "parent_gene": "", + "protein_md5": "33e7dc7d11d7b539319895ea6c933e23", + "protein_translation": "MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010602" + ], + [ + "gene_synonym", + "ECK3221" + ], + [ + "gene_synonym", + "EcoGene:EG12819" + ], + [ + "gene_synonym", + "GI:16131122" + ], + [ + "gene_synonym", + "GeneID:947821" + ], + [ + "gene_synonym", + "JW3201" + ], + [ + "gene_synonym", + "NP_417699.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64612" + ], + [ + "gene_synonym", + "b3232" + ], + [ + "gene_synonym", + "yhcM" + ], + [ + "gene_synonym", + "zapE" + ] + ], + "dna_sequence": "ATGCAAAGCGTTACCCCAACATCGCAATACCTGAAGGCGCTTAATGAAGGCAGCCATCAACCCGACGACGTTCAAAAAGAGGCCGTCAGCCGCCTGGAAATTATTTATCAGGAACTCATCAATAGCACGCCACCAGCCCCCAGGACGAGTGGGCTAATGGCGCGGGTCGGTAAGCTGTGGGGTAAACGCGAAGACACAAAGCATACGCCAGTGCGTGGCTTATATATGTGGGGCGGTGTAGGACGCGGGAAAACCTGGCTGATGGACCTTTTCTATCAAAGCCTGCCGGGAGAGCGGAAACAGCGCCTGCACTTTCACCGTTTTATGCTGCGGGTGCATGAAGAGCTAACTGCCTTACAGGGGCAGACCGATCCGCTGGAAATTATTGCCGATCGCTTTAAAGCCGAAACTGACGTGCTCTGTTTTGACGAATTTTTTGTTTCTGATATTACCGATGCCATGCTACTTGGCGGTCTGATGAAAGCCCTGTTCGCTCGCGGTATTACCCTGGTAGCGACGTCAAATATTCCGCCGGATGAACTTTATCGAAATGGCCTGCAACGTGCGCGTTTTCTGCCTGCAATCGATGCCATTAAACAGCATTGTGATGTAATGAACGTGGACGCTGGTGTTGATTATCGTCTGCGTACACTCACTCAGGCGCATCTGTGGCTTTCGCCACTTCACGATGAAACCCGGGCGCAAATGGATAAACTATGGTTGGCGCTGGCGGGGGGGAAACGAGAAAATTCACCGACGTTAGAAATCAACCATCGGCCATTAGCAACAATGGGCGTCGAGAACCAGACGCTGGCGGTCTCTTTTACTACGCTGTGCGTCGACGCCCGCAGTCAGCATGACTATATTGCGCTCTCACGTCTCTTTCATACGGTCATGTTGTTTGATGTACCAGTTATGACGCGGTTGATGGAGAGCGAAGCGCGGCGCTTTATTGCGCTGGTGGATGAGTTTTACGAGCGCCATGTCAAATTAGTGGTGAGTGCAGAAGTGCCGCTGTATGAAATTTATCAGGGCGATCGGCTGAAGTTTGAGTTCCAGCGTTGCCTGTCACGTCTGCAAGAGATGCAAAGCGAAGAGTATCTGAAGCGCGAGCATTTGGCGGGTTAA", + "dna_sequence_length": 1128, + "functions": [ + "divisome ATPase" + ], + "id": "CDS_3177", + "location": [ + [ + "NC_000913", + 3379997, + "-", + 1128 + ] + ], + "md5": "87b1f03f1660785b3eafcbacc222ce10", + "parent_gene": "", + "protein_md5": "1dcea8291547c6a54a40baf28d6dee89", + "protein_translation": "MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALAGGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG", + "protein_translation_length": 375, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010606" + ], + [ + "gene_synonym", + "ECK3222" + ], + [ + "gene_synonym", + "EcoGene:EG12614" + ], + [ + "gene_synonym", + "GI:90111560" + ], + [ + "gene_synonym", + "GeneID:947815" + ], + [ + "gene_synonym", + "JW5539" + ], + [ + "gene_synonym", + "NP_417700.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADW3" + ], + [ + "gene_synonym", + "b3233" + ], + [ + "gene_synonym", + "yhcB" + ] + ], + "dna_sequence": "ATGACCTGGGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAGCAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAA", + "dna_sequence_length": 399, + "functions": [ + "DUF1043 family inner membrane-anchored protein" + ], + "id": "CDS_3178", + "location": [ + [ + "NC_000913", + 3380191, + "+", + 399 + ] + ], + "md5": "eae448ea721d8aabf19b9ff460fbeab2", + "parent_gene": "", + "protein_md5": "0d552860d03d7427ddfb58c6c723f3b7", + "protein_translation": "MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRTGAKRD", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010609" + ], + [ + "gene_synonym", + "ECK3223" + ], + [ + "gene_synonym", + "EcoGene:EG12612" + ], + [ + "gene_synonym", + "GI:16131124" + ], + [ + "gene_synonym", + "GeneID:947812" + ], + [ + "gene_synonym", + "JW3203" + ], + [ + "gene_synonym", + "NP_417701.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39099" + ], + [ + "gene_synonym", + "b3234" + ], + [ + "gene_synonym", + "degQ" + ], + [ + "gene_synonym", + "hhoA" + ] + ], + "dna_sequence": "ATGAAAAAACAAACCCAGCTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGGCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGTCATCATCAACGCCAGTAAAGGCTATGTGCTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACTTTATCCAGACAGATGCTTCCATTAACCGCGGTAACTCCGGCGGTGCACTATTAAACCTTAACGGTGAGTTAATTGGCATCAACACTGCAATCCTTGCGCCTGGCGGCGGGAGCGTCGGGATTGGATTTGCCATCCCCAGTAATATGGCGCGAACACTGGCGCAGCAGCTTATCGACTTTGGTGAAATCAAACGCGGTTTGTTAGGCATCAAAGGCACCGAGATGAGTGCCGATATCGCCAAAGCCTTCAACCTTGACGTGCAGCGTGGCGCGTTTGTCAGCGAAGTGTTGCCAGGTTCTGGCTCGGCAAAAGCGGGCGTCAAAGCGGGCGATATTATTACCAGCCTCAACGGCAAACCGCTGAATAGCTTTGCTGAGTTGCGCTCTCGTATCGCGACCACCGAGCCGGGCACGAAAGTGAAGCTTGGCCTGCTGCGTAACGGCAAACCACTGGAAGTAGAAGTGACGCTCGATACCAGCACCTCTTCGTCGGCCAGCGCTGAAATGATCACGCCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGTGAACTCGATTGCTGAAATGCGTAAAGTGCTGGCGGCAAAACCGGCCATCATCGCCCTGCAAATTGTACGCGGCAATGAAAGCATCTATCTGCTGATGCGTTAA", + "dna_sequence_length": 1368, + "functions": [ + "serine endoprotease, periplasmic" + ], + "id": "CDS_3179", + "location": [ + [ + "NC_000913", + 3380743, + "+", + 1368 + ] + ], + "md5": "16b7de83121d1afa25e4a001717066fc", + "parent_gene": "", + "protein_md5": "6c89d1124e197cfdfd2b3ffa959812e4", + "protein_translation": "MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESIYLLMR", + "protein_translation_length": 455, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010611" + ], + [ + "gene_synonym", + "ECK3224" + ], + [ + "gene_synonym", + "EcoGene:EG11652" + ], + [ + "gene_synonym", + "GI:16131125" + ], + [ + "gene_synonym", + "GeneID:947865" + ], + [ + "gene_synonym", + "JW3204" + ], + [ + "gene_synonym", + "NP_417702.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEE3" + ], + [ + "gene_synonym", + "b3235" + ], + [ + "gene_synonym", + "degS" + ], + [ + "gene_synonym", + "hhoB" + ], + [ + "gene_synonym", + "htrH" + ] + ], + "dna_sequence": "ATGTTTGTGAAGCTCTTACGTTCCGTTGCGATTGGATTAATTGTCGGCGCTATTCTGCTGGTTGCCATGCCTTCGCTGCGCAGCCTTAACCCGCTTTCCACTCCGCAATTTGACAGTACCGATGAGACGCCTGCCAGCTATAATCTGGCGGTTCGCCGCGCCGCGCCAGCGGTGGTTAACGTTTACAACCGTGGTTTGAACACCAACTCTCACAACCAGCTTGAGATCCGCACCCTGGGATCCGGTGTAATCATGGATCAACGCGGTTATATCATCACCAATAAACACGTCATCAACGACGCCGATCAGATCATCGTCGCCTTACAGGATGGACGTGTATTTGAAGCATTGCTGGTGGGATCTGACTCTCTAACCGATCTGGCGGTACTTAAAATTAATGCCACTGGCGGTTTACCTACCATTCCAATTAATGCACGTCGCGTACCGCACATTGGCGACGTAGTACTGGCGATCGGTAACCCGTACAACCTCGGGCAGACCATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAACTTCCTCCAAACCGATGCTTCCATTAACCACGGTAACTCTGGCGGCGCGCTGGTGAACTCGCTGGGCGAACTGATGGGCATTAATACGCTGTCGTTTGATAAGAGTAACGATGGCGAAACGCCGGAAGGTATCGGCTTTGCGATTCCTTTCCAGTTAGCAACCAAAATTATGGATAAGCTGATCCGCGATGGTCGCGTGATCCGCGGCTACATTGGTATCGGCGGACGTGAGATCGCACCACTGCACGCGCAGGGCGGTGGTATAGATCAACTGCAAGGGATCGTGGTTAATGAAGTGTCACCTGACGGCCCGGCGGCGAATGCGGGTATTCAGGTCAACGATCTGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAA", + "dna_sequence_length": 1068, + "functions": [ + "serine endoprotease, periplasmic" + ], + "id": "CDS_3180", + "location": [ + [ + "NC_000913", + 3382200, + "+", + 1068 + ] + ], + "md5": "7be8ebbb659d094b9964e1a6fcbe0ba3", + "parent_gene": "", + "protein_md5": "d93ed33f63ae8ebec2b3f08782629cbc", + "protein_translation": "MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010613" + ], + [ + "gene_synonym", + "ECK3225" + ], + [ + "gene_synonym", + "EcoGene:EG10576" + ], + [ + "gene_synonym", + "GI:16131126" + ], + [ + "gene_synonym", + "GeneID:947854" + ], + [ + "gene_synonym", + "JW3205" + ], + [ + "gene_synonym", + "NP_417703.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61889" + ], + [ + "gene_synonym", + "b3236" + ], + [ + "gene_synonym", + "mdh" + ] + ], + "dna_sequence": "ATGAAAGTCGCAGTCCTCGGCGCTGCTGGCGGTATTGGCCAGGCGCTTGCACTACTGTTAAAAACCCAACTGCCTTCAGGTTCAGAACTCTCTCTGTATGATATCGCTCCAGTGACTCCCGGTGTGGCTGTCGATCTGAGCCATATCCCTACTGCTGTGAAAATCAAAGGTTTTTCTGGTGAAGATGCGACTCCGGCGCTGGAAGGCGCAGATGTCGTTCTTATCTCTGCAGGCGTAGCGCGTAAACCGGGTATGGATCGTTCCGACCTGTTTAACGTTAACGCCGGCATCGTGAAAAACCTGGTACAGCAAGTTGCGAAAACCTGCCCGAAAGCGTGCATTGGTATTATCACTAACCCGGTTAACACCACAGTTGCAATTGCTGCTGAAGTGCTGAAAAAAGCCGGTGTTTATGACAAAAACAAACTGTTCGGCGTTACCACGCTGGATATCATTCGTTCCAACACCTTTGTTGCGGAACTGAAAGGCAAACAGCCAGGCGAAGTTGAAGTGCCGGTTATTGGCGGTCACTCTGGTGTTACCATTCTGCCGCTGCTGTCACAGGTTCCTGGCGTTAGTTTTACCGAGCAGGAAGTGGCTGATCTGACCAAACGCATCCAGAACGCGGGTACTGAAGTGGTTGAAGCGAAGGCCGGTGGCGGGTCTGCAACCCTGTCTATGGGCCAGGCAGCTGCACGTTTTGGTCTGTCTCTGGTTCGTGCACTGCAGGGCGAACAAGGCGTTGTCGAATGTGCCTACGTTGAAGGCGACGGTCAGTACGCCCGTTTCTTCTCTCAACCGCTGCTGCTGGGTAAAAACGGCGTGGAAGAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAA", + "dna_sequence_length": 939, + "functions": [ + "malate dehydrogenase, NAD(P)-binding" + ], + "id": "CDS_3181", + "location": [ + [ + "NC_000913", + 3384268, + "-", + 939 + ] + ], + "md5": "72346576e32720b274cc72c9b0afc089", + "parent_gene": "", + "protein_md5": "e900d4236746abfdd6436dab2615ca4b", + "protein_translation": "MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010620" + ], + [ + "gene_synonym", + "ECK3226" + ], + [ + "gene_synonym", + "EcoGene:EG10070" + ], + [ + "gene_synonym", + "GI:16131127" + ], + [ + "gene_synonym", + "GeneID:947861" + ], + [ + "gene_synonym", + "JW3206" + ], + [ + "gene_synonym", + "NP_417704.1" + ], + [ + "gene_synonym", + "Rarg" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6D0" + ], + [ + "gene_synonym", + "argR" + ], + [ + "gene_synonym", + "b3237" + ], + [ + "gene_synonym", + "xerA" + ] + ], + "dna_sequence": "ATGCGAAGCTCGGCTAAGCAAGAAGAACTAGTTAAAGCATTTAAAGCATTACTTAAAGAAGAGAAATTTAGCTCCCAGGGCGAAATCGTCGCCGCGTTGCAGGAGCAAGGCTTTGACAATATTAATCAGTCTAAAGTCTCGCGGATGTTGACCAAGTTTGGTGCTGTACGTACACGCAATGCCAAAATGGAAATGGTTTACTGCCTGCCAGCTGAACTGGGTGTACCAACCACCTCCAGTCCATTGAAGAATCTGGTGCTGGATATCGACTACAACGATGCAGTTGTCGTGATTCATACCAGCCCTGGCGCGGCGCAGTTAATTGCTCGCCTGCTGGACTCACTGGGCAAAGCAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAA", + "dna_sequence_length": 471, + "functions": [ + "l-arginine-responsive arginine metabolism regulon transcriptional regulator" + ], + "id": "CDS_3182", + "location": [ + [ + "NC_000913", + 3384703, + "+", + 471 + ] + ], + "md5": "616b1511d78b0991e88c913bf320f24d", + "parent_gene": "", + "protein_md5": "91d0535ec00ce932aac0c98e8a6bf9df", + "protein_translation": "MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010623" + ], + [ + "gene_synonym", + "ECK3227" + ], + [ + "gene_synonym", + "EcoGene:EG12820" + ], + [ + "gene_synonym", + "GI:90111561" + ], + [ + "gene_synonym", + "GeneID:947835" + ], + [ + "gene_synonym", + "JW5540" + ], + [ + "gene_synonym", + "NP_417705.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64614" + ], + [ + "gene_synonym", + "b3238" + ], + [ + "gene_synonym", + "yhcN" + ] + ], + "dna_sequence": "ATGAAAATCAAAACCACTGTTGCTGCATTAAGCGTACTTTCTGTTCTCTCTTTCGGTGCATTCGCTGCCGACTCCATTGATGCTGCACAAGCACAAAATCGTGAAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAA", + "dna_sequence_length": 264, + "functions": [ + "cadmium and peroxide resistance protein, stress-induced" + ], + "id": "CDS_3183", + "location": [ + [ + "NC_000913", + 3385538, + "+", + 264 + ] + ], + "md5": "c56040199fd240ddabbfc3345bb223b4", + "parent_gene": "", + "protein_md5": "1e53a06f337176a1b4bd9e96a8ebbd36", + "protein_translation": "MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010625" + ], + [ + "gene_synonym", + "ECK3228" + ], + [ + "gene_synonym", + "EcoGene:EG12821" + ], + [ + "gene_synonym", + "GI:16131129" + ], + [ + "gene_synonym", + "GeneID:947830" + ], + [ + "gene_synonym", + "JW3208" + ], + [ + "gene_synonym", + "NP_417706.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64616" + ], + [ + "gene_synonym", + "b3239" + ], + [ + "gene_synonym", + "yhcO" + ] + ], + "dna_sequence": "ATGAATATTTATACCTTTGATTTTGATGAGATTGAGAGTCAGGAGGATTTTTATCGTGACTTTAGCCAAACCTTTGGTCTGGCGAAAGATAAGGTACGCGATCTCGACTCACTATGGGATGTGTTAATGAACGATGTCCTGCCGCTACCACTTGAGATTGAATTTGTTCATCTGGGAGAGAAAACGCGTCGCCGTTTTGGCGCGTTAATATTGCTGTTTGATGAGGCAGAGGAAGAGCTGGAAGGGCATTTGCGTTTTAATGTTCGTCATTAG", + "dna_sequence_length": 273, + "functions": [ + "putative barnase inhibitor" + ], + "id": "CDS_3184", + "location": [ + [ + "NC_000913", + 3386129, + "-", + 273 + ] + ], + "md5": "5e323afff5d208b2fa9ad3fd59fdac8b", + "parent_gene": "", + "protein_md5": "1062621ed99d416d9d264916ad240b05", + "protein_translation": "MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010629" + ], + [ + "gene_synonym", + "ECK3229" + ], + [ + "gene_synonym", + "EcoGene:EG12822" + ], + [ + "gene_synonym", + "GI:16131130" + ], + [ + "gene_synonym", + "GeneID:947747" + ], + [ + "gene_synonym", + "JW3209" + ], + [ + "gene_synonym", + "NP_417707.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46481" + ], + [ + "gene_synonym", + "aaeB" + ], + [ + "gene_synonym", + "b3240" + ], + [ + "gene_synonym", + "yhcP" + ] + ], + "dna_sequence": "ATGGGTATTTTCTCCATTGCTAACCAACATATTCGCTTTGCGGTAAAACTGGCGACCGCCATTGTACTGGCGCTGTTTGTTGGCTTTCACTTCCAGCTGGAAACGCCACGCTGGGCGGTACTGACAGCGGCGATTGTTGCCGCCGGTACGGCCTTTGCTGCGGGAGGTGAACCGTATTCTGGCGCTATTCGCTATCGTGGCTTTTTGCGCATCATCGGCACATTTATTGGCTGTATTGCCGGACTGGTGATCATCATTGCGATGATCCGCGCACCATTATTGATGATTCTGGTGTGCTGTATCTGGGCCGGTTTTTGTACCTGGATATCCTCGCTGGTACGAATAGAAAACTCGTATGCGTGGGGGCTGGCCGGTTATACCGCGCTGATCATTGTGATCACCATTCAGCCGGAACCATTGCTTACGCCGCAGTTTGCCGTCGAACGTTGTAGCGAGATCGTTATCGGTATTGTGTGTGCGATTATGGCGGATTTGCTCTTTTCTCCGCGATCGATCAAACAAGAAGTGGATCGAGAGCTGGAAAGTTTGCTGGTCGCGCAATATCAATTAATGCAACTCTGTATCAAGCATGGCGATGGTGAAGTTGTCGATAAAGCCTGGGGCGACCTGGTGCGACGCACCACGGCGCTACAAGGCATGCGCAGCAACCTGAATATGGAATCTTCCCGCTGGGCGCGGGCCAATCGACGTTTAAAAGCGATCAATACGCTATCGCTGACGCTGATTACCCAATCCTGCGAAACTTATCTTATTCAGAATACGCGCCCGGAATTGATCACTGATACTTTCCGCGAATTTTTTGACACGCCGGTAGAAACCGCGCAGGACGTCCACAAGCAGCTCAAACGCCTGCGGAGAGTTATCGCCTGGACCGGGGAACGGGAAACGCCTGTCACCATTTATAGCTGGGTCGCGGCGGCAACGCGTTATCAGCTTCTCAAGCGCGGCGTTATCAGTAACACAAAAATCAACGCCACCGAAGAAGAGATCCTGCAAGGCGAACCGGAAGTAAAAGTAGAGTCAGCCGAACGTCATCATGCAATGGTTAACTTCTGGCGAACCACACTTTCCTGCATTCTGGGCACGCTTTTCTGGCTGTGGACGGGCTGGACTTCCGGCAGTGGTGCAATGGTGATGATTGCGGTAGTGACGTCACTGGCAATGCGTTTGCCGAATCCACGCATGGTGGCGATCGACTTTATCTACGGGACGCTGGCCGCGCTGCCGTTAGGGCTGCTCTACTTTTTGGTGATTATCCCTAATACCCAACAGAGCATGTTGCTGCTGTGCATTAGCCTGGCAGTGCTGGGATTCTTCCTCGGTATAGAAGTACAGAAACGGCGACTGGGCTCGATGGGGGCACTGGCCAGCACCATAAATATTATCGTGCTGGATAACCCGATGACTTTCCATTTCAGTCAGTTTCTCGACAGCGCATTAGGGCAAATCGTCGGCTGTGTGCTCGCGTTCACCGTTATTTTGCTGGTGCGGGATAAATCGCGCGACAGGACCGGACGTGTACTGCTTAATCAGTTTGTTTCTGCCGCTGTTTCCGCGATGACTACCAATGTGGCACGTCGTAAAGAGAACCACCTCCCGGCACTTTATCAGCAGCTGTTTTTGCTGATGAATAAGTTCCCAGGGGATTTGCCGAAATTTCGCCTGGCGCTGACGATGATTATCGCGCACCAGCGCCTGCGTGATGCACCGATCCCGGTTAACGAGGATTTATCGGCGTTTCACCGACAAATGCGCCGCACAGCAGACCATGTGATATCTGCCCGTAGCGATGATAAACGTCGTCGGTACTTTGGCCAGTTGCTGGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAA", + "dna_sequence_length": 1968, + "functions": [ + "p-hydroxybenzoic acid efflux system component" + ], + "id": "CDS_3185", + "location": [ + [ + "NC_000913", + 3388188, + "-", + 1968 + ] + ], + "md5": "d1ed3d3828521faa8edb78735e1d9d34", + "parent_gene": "", + "protein_md5": "2276b485008814da85936b2a43417bf6", + "protein_translation": "MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCAIMADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVNRLAGMLHKYQHALTDS", + "protein_translation_length": 655, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010631" + ], + [ + "gene_synonym", + "ECK3230" + ], + [ + "gene_synonym", + "EcoGene:EG12823" + ], + [ + "gene_synonym", + "GI:16131131" + ], + [ + "gene_synonym", + "GeneID:947748" + ], + [ + "gene_synonym", + "JW3210" + ], + [ + "gene_synonym", + "NP_417708.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46482" + ], + [ + "gene_synonym", + "aaeA" + ], + [ + "gene_synonym", + "b3241" + ], + [ + "gene_synonym", + "yhcQ" + ] + ], + "dna_sequence": "GTGAAAACACTAATAAGAAAATTCTCCCGTACGGCCATCACGGTCGTATTAGTCATTCTGGCCTTCATCGCAATTTTTAATGCCTGGGTCTATTACACCGAATCCCCCTGGACGCGTGACGCGCGCTTTAGCGCTGACGTCGTTGCGATCGCGCCGGACGTTTCTGGACTCATTACCCAGGTGAATGTTCATGATAACCAGCTGGTGAAAAAAGGACAGATACTGTTCACCATCGACCAGCCGCGCTATCAAAAGGCGCTTGAGGAAGCGCAAGCCGATGTTGCTTATTATCAGGTACTGGCACAGGAGAAACGCCAGGAGGCCGGACGTCGTAACCGTCTCGGTGTGCAGGCGATGTCTCGCGAAGAGATCGACCAGGCCAACAACGTACTACAAACGGTTCTGCATCAGTTAGCGAAAGCGCAGGCGACCCGCGATCTGGCAAAACTGGATCTTGAACGCACGGTGATCCGCGCGCCAGCAGATGGCTGGGTGACCAACCTCAACGTCTATACCGGTGAGTTTATTACTCGAGGATCAACGGCGGTTGCGCTGGTGAAACAGAACTCCTTCTATGTACTGGCCTATATGGAAGAAACTAAGCTGGAAGGGGTGCGTCCGGGGTATCGTGCAGAGATCACGCCGCTTGGCAGTAACAAAGTGCTGAAAGGGACTGTTGATAGTGTTGCCGCAGGGGTCACCAACGCCAGCAGCACGCGTGACGACAAAGGGATGGCGACTATAGACTCTAACCTTGAATGGGTGCGTCTTGCGCAACGTGTTCCGGTTCGTATTCGTCTCGACAACCAGCAAGAGAACATCTGGCCTGCGGGCACCACTGCTACAGTGGTGGTCACTGGCAAACAAGATCGCGACGAAAGCCAGGATTCGTTCTTCCGTAAAATGGCCCATCGCCTGCGTGAGTTTGGTTAA", + "dna_sequence_length": 933, + "functions": [ + "p-hydroxybenzoic acid efflux system component" + ], + "id": "CDS_3186", + "location": [ + [ + "NC_000913", + 3389126, + "-", + 933 + ] + ], + "md5": "5bf05869247504daaefee677bd4d1fed", + "parent_gene": "", + "protein_md5": "e7594110cb9a59b8d0ba2ce9763c8fcd", + "protein_translation": "MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010636" + ], + [ + "gene_synonym", + "ECK3231" + ], + [ + "gene_synonym", + "EcoGene:EG12824" + ], + [ + "gene_synonym", + "GI:90111562" + ], + [ + "gene_synonym", + "GeneID:947751" + ], + [ + "gene_synonym", + "JW5541" + ], + [ + "gene_synonym", + "NP_417709.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46478" + ], + [ + "gene_synonym", + "aaeX" + ], + [ + "gene_synonym", + "b3242" + ], + [ + "gene_synonym", + "yhcR" + ] + ], + "dna_sequence": "ATGAGTCTGTTTCCCGTTATCGTGGTGTTTGGGCTGTCCTTCCCACCGATATTTTTTGAATTGCTTTTATCACTGGCGATTTTCTGGCTGGTGCGCCGGGTACTTGTGCCAACAGGTATCTACGACTTTGTCTGGCATCCGGCGTTGTTCAACACCGCGCTCTATTGCTGCTTGTTTTATTTGATATCGCGACTGTTCGTTTGA", + "dna_sequence_length": 204, + "functions": [ + "DUF1656 family putative inner membrane efflux pump associated protein" + ], + "id": "CDS_3187", + "location": [ + [ + "NC_000913", + 3389337, + "-", + 204 + ] + ], + "md5": "c0d22ec17f10f8c1a9a1c971015ed7ed", + "parent_gene": "", + "protein_md5": "e6807ec5cc83f681ac62c68c1bc8ef12", + "protein_translation": "MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010639" + ], + [ + "gene_synonym", + "ECK3232" + ], + [ + "gene_synonym", + "EcoGene:EG12825" + ], + [ + "gene_synonym", + "GI:16131133" + ], + [ + "gene_synonym", + "GeneID:947760" + ], + [ + "gene_synonym", + "JW3212" + ], + [ + "gene_synonym", + "NP_417710.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67662" + ], + [ + "gene_synonym", + "aaeR" + ], + [ + "gene_synonym", + "b3243" + ], + [ + "gene_synonym", + "qseA" + ], + [ + "gene_synonym", + "yhcS" + ] + ], + "dna_sequence": "ATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGTAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCAGGTAAAGCTGTTAAACCGTAGCACACGCAGCATTGGCCTGACCGAAGCCGGTAGAATTTACTACCAGGGCTGCCGTCGTATGCTTCATGAAGTGCAGGATGTTCATGAGCAACTGTATGCCTTCAATAACACCCCCATCGGGACGCTACGCATTGGCTGTTCTTCAACTATGGCACAAAATGTTCTCGCCGGGCTGACAGCCAAAATGCTGAAAGAATACCCAGGTTTGAGCGTCAATCTGGTTACCGGAATTCCAGCCCCCGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCGCTGGCTGACGGCGGGTGCCGGGATCGCCTACGTGCCGCTGATGTGGGTGATCAACGAGATCAATCGTGGGGAGCTGGAGATCCTGCTGCCGCGTTACCAGTCAGATCCACGCCCGGTTTATGCGTTATATACCGAAAAAGATAAGCTGCCGCTGAAGGTACAGGTCGTGATCAACTCGCTGACGGATTATTTTGTTGAGGTCGGTAAATTGTTTCAGGAGATGCACGGGCGCGGGAAAGAGAAGTAA", + "dna_sequence_length": 930, + "functions": [ + "transcriptional regulator for aaeXAB operon" + ], + "id": "CDS_3188", + "location": [ + [ + "NC_000913", + 3389520, + "+", + 930 + ] + ], + "md5": "b2c3f716805ddadbb924e37e86bc280b", + "parent_gene": "", + "protein_md5": "da89535fcc37ea69c1a9f736e4b9291c", + "protein_translation": "MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010642" + ], + [ + "gene_synonym", + "ECK3233" + ], + [ + "gene_synonym", + "EcoGene:EG12826" + ], + [ + "gene_synonym", + "GI:16131134" + ], + [ + "gene_synonym", + "GeneID:947749" + ], + [ + "gene_synonym", + "JW3213" + ], + [ + "gene_synonym", + "NP_417711.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGG8" + ], + [ + "gene_synonym", + "b3244" + ], + [ + "gene_synonym", + "tldD" + ], + [ + "gene_synonym", + "yhdO" + ] + ], + "dna_sequence": "ATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCTGAAACATCAGGACTTGTTCGCGATCCTCGGTCAACTGGCCGAACGTCGCCTTGATTATGGCGATCTCTATTTTCAGTCGAGCTATCACGAATCCTGGGTTTTAGAAGACCGCATTATTAAAGATGGTTCTTACAACATCGATCAGGGCGTTGGTGTGCGTGCAATCAGCGGTGAAAAAACCGGATTTGCTTACGCTGACCAAATCAGCCTGCTGGCGCTGGAACAGAGTGCGCAAGCGGCGCGCACCATCGTCCGTGATAGTGGTGATGGTAAAGTACAGACGCTGGGCGCGGTAGAGCATAGCCCGTTGTATACCTCGGTAGATCCGCTGCAAAGCATGAGCCGTGAAGAGAAGCTGGATATCCTGCGTCGCGTCGATAAGGTTGCCCGCGAAGCGGACAAGCGCGTACAGGAAGTGACTGCCAGCCTCAGTGGTGTCTATGAATTAATTTTGGTTGCGGCCACCGACGGCACGCTAGCGGCGGATGTCCGTCCGCTGGTGCGTCTTTCCGTGAGCGTTCTCGTCGAAGAAGATGGCAAACGCGAACGCGGTGCCAGTGGCGGCGGCGGTCGTTTTGGTTATGAATTCTTCCTTGCCGATCTCGACGGCGAAGTCCGTGCGGATGCATGGGCAAAAGAAGCAGTGCGTATGGCGCTGGTCAATCTTTCTGCCGTTGCTGCACCAGCGGGCACCATGCCGGTAGTACTTGGCGCAGGTTGGCCGGGCGTGCTGTTGCATGAAGCGGTTGGTCACGGTCTGGAAGGCGACTTCAACCGCCGTGGCACTTCAGTATTTAGTGGACAGGTCGGGGAGCTGGTGGCTTCAGAACTGTGTACCGTGGTTGATGATGGCACGATGGTCGATCGCCGAGGTTCGGTGGCGATTGATGACGAAGGTACGCCAGGCCAGTACAACGTGCTGATTGAGAACGGCATTCTGAAAGGCTACATGCAGGATAAACTCAACGCGCGTTTGATGGGGATGACGCCGACTGGCAACGGTCGCCGTGAATCCTACGCCCATCTGCCCATGCCGCGTATGACCAACACCTATATGCTGCCGGGTAAATCGACCCCGCAGGAAATTATTGAATCCGTTGAGTACGGTATCTATGCACCGAACTTTGGTGGCGGTCAGGTGGATATCACCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAACGTTGAAAGTCGATAACCTGACTGTTGGCGGTACTGCGTAA", + "dna_sequence_length": 1446, + "functions": [ + "putative peptidase" + ], + "id": "CDS_3189", + "location": [ + [ + "NC_000913", + 3392028, + "-", + 1446 + ] + ], + "md5": "93715e517e3ee4770bccd97dad433aba", + "parent_gene": "", + "protein_md5": "c638711cbdded3bee890efdd9a8123be", + "protein_translation": "MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA", + "protein_translation_length": 481, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174102" + ], + [ + "gene_synonym", + "ECK3234" + ], + [ + "gene_synonym", + "EcoGene:EG12827" + ], + [ + "gene_synonym", + "GI:49176330" + ], + [ + "gene_synonym", + "GeneID:2847740" + ], + [ + "gene_synonym", + "JW5542" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46474" + ], + [ + "gene_synonym", + "YP_026208.1" + ], + [ + "gene_synonym", + "b4472" + ], + [ + "gene_synonym", + "yhdP" + ], + [ + "gene_synonym", + "yhdQ" + ], + [ + "gene_synonym", + "yhdR" + ] + ], + "dna_sequence": "GTGAGGCGATTGCCGGGGATTTTACTGCTTACTGGAGCCGCGCTCGTTGTGATCGCTGCCCTGCTGGTTAGCGGCCTGCGTATTGCTTTACCGCATCTTGACGCCTGGCGTCCGGAAATCCTCAACAAAATAGAATCCGCGACTGGCATGCCGGTAGAAGCCAGTCAGCTCTCAGCCAGCTGGCAGAATTTTGGCCCGACGCTTGAAGCACACGACATCCGTGCAGAACTAAAAGATGGCGGCGAATTTTCGGTTAAACGCGTTACTCTGGCGCTGGATGTCTGGCAGAGCCTGTTACATATGCGCTGGCAGTTTCGCGACCTCACTTTCTGGCAGCTGCGCTTTCGCACCAACACTCCTATCACCAGCGGTGGTAGTGATGACAGTCTGGAAGCCAGTCACATCAGCGATCTGTTTCTTCGTCAATTTGACCATTTCGATCTTCGCGACAGTGAAGTCAGTTTCCTGACGCCATCCGGTCAGCGCGCCGAGCTGGCGATCCCACAACTCACCTGGCTGAACGATCCACGTCGACACCGTGCGGAAGGCCTGGTAAGCCTCTCCAGCCTTACCGGACAGCACGGCGTGATGCAGGTGCGCATGGATTTGCGCGATGATGAGGGGTTGTTAAGCAATGGTCGCGTCTGGCTCCAGGCGGATGACATCGACCTGAAGCCGTGGCTCGGTAAATGGATGCAGGACAATATTGCGCTGGAAACGGCACAGTTCTCCCTTGAAGGCTGGATGACGATCGACAAAGGCGATGTAACCGGCGGTGACGTCTGGCTGAAACAGGGCGGTGCCAGCTGGTTGGGCGAGAAGCAAACGCATACGCTGTCGGTGGATAATCTGACCGCGCATATTACGCGTGAAAATCCGGGCTGGCAGTTCTCTATTCCCGATACACGGATCACGATGGACGGCAAACCCTGGCCGAGCGGAGCATTGACGCTGGCCTGGATACCGGAACAGGACGTTGGCGGCAAAGACAATAAACGCAGTGACGAACTCCGGATTCGCGCCAGTAATCTGGAGCTGGCAGGCCTGGAGGGCATACGCCCGCTGGCCGCGAAACTTTCACCTGCACTGGGTGATGTTTGGCGCTCCACACAACCGAGCGGCAAGATTAACACTCTGGCGCTGGATATCCCGCTTCAGGCGGCAGACAAGACCCGTTTTCAGGCATCGTGGAGCGATCTGGCCTGGAAGCAATGGAAATTATTACCGGGTGCGGAACACTTCTCCGGGACGCTTTCCGGCAGCGTTGAAAATGGTTTGCTTACCGCGTCGATGAAGCAGGCAAAGATGCCTTACGAAACGGTATTCCGTGCGCCACTAGAAATCGCCGACGGCCAGGCAACTATAAGCTGGCTGAACAATAACAAAGGTTTCCAGCTGGATGGGCGTAATATTGACGTTAAAGCCAAAGCCGTCCATGCGCGCGGCGGTTTTCGTTACCTGCAACCTGCTAACGATGAACCCTGGCTGGGTATTCTGGCTGGCATCAGTACCGATGATGGTTCACAAGCCTGGCGCTATTTCCCGGAAAACTTGATGGGTAAAGACCTGGTTGATTACTTAAGTGGCGCGATTCAGGGCGGTGAAGCGGATAACGCGACGCTGGTTTATGGTGGCAATCCGCAACTCTTCCCCTATAAACACAACGAAGGTCAGTTTGAAGTGCTGGTGCCGCTGCGCAACGCGAAGTTTGCCTTCCAGCCGGACTGGCCTGCATTAACTAACCTTGATATTGAACTGGACTTTATTAACGACGGTTTATGGATGAAAACCGATGGCGTTAATCTGGGCGGCGTGCGCGCGAGTAATCTTACCGCAGTGATCCCTGACTACTCAAAAGAAAAACTGCTGATTGACGCTGACATTAAAGGTCCGGGTAAAGCCGTTGGCCCTTACTTTGATGAGACACCGCTGAAAGATTCTCTGGGTGCGACCCTGCAAGAACTCCAGCTCGACGGCGATGTGAATGCTCGCTTACATCTTGATATCCCGCTGAACGGCGAACTGGTAACCGCGAAAGGTGAAGTGACGCTGCGTAATAACAGTCTGTTTATCAAACCACTCGACAGCACCCTGAAAAATTTGAGCGGTAAATTCAGCTTTATCAATAGCGATCTGCAAAGTGAACCACTGACAGCAAGCTGGTTTAATCAGCCGTTGAACGTGGATTTTTCCACCAAAGAAGGGGCAAAAGCCTACCAGGTAGCGGTAAACCTCAACGGTAACTGGCAACCGGCGAAAACCGGCGTTCTGCCTGAAGCGGTGAACGAAGCATTGAGTGGCAGCGTGGCGTGGGATGGTAAAGTGGGCATTGATCTGCCTTATCATGCTGGTGCGACCTATAACATAGAGCTGAACGGCGATCTAAAGAATGTGAGCAGTCACTTACCTTCACCGTTAGCCAAACCTGCGGGTGAACCACTAGCGGTAAACGTTAAGGTTGATGGCAATCTCAACAGCTTTGAATTAACCGGACAGGCTGGTGCGGATAATCATTTCAATAGCCGCTGGTTGCTCGGTCAAAAGCTGACGCTCGATCGTGCTATTTGGGCGGCAGACAGTAAAACGCTCCCGCCGTTGCCGGAACAAAGTGGCGTTGAACTCAATATGCCGCCGATGAATGGTGCCGAGTGGCTGGCCCTGTTCCAGAAAGGCGCTGCGGAGAGTGTCGGTGGTGCAGCGAGTTTCCCACAACACATAACGTTACGTACGCCTATGTTGTCACTGGGAAATCAGCAATGGAATAACCTGAGTATTGTTTCGCAACCGACGGCAAATGGCACCCTGGTTGAAGCGCAAGGGCGTGAAATCAACGCCACGCTAGCGATGCGTAATAACGCGCCGTGGCTGGCGAATATCAAATATCTTTATTACAACCCGAGCGTGGCGAAAACTCGTGGTGATTCAACGCCGTCATCACCTTTCCCGACAACGGAGCGCATTAACTTCCGTGGCTGGCCGGACGCCCAAATACGATGCACAGAGTGCTGGTTCTGGGGGCAAAAATTCGGTCGCATTGACAGTGATATCACCATTTCTGGCGATACGTTAACGCTGACCAATGGACTGATTGATACTGGTTTCTCGCGGCTTACTGCCGATGGTGAATGGGTTAATAATCCGGGGAATGAACGTACCTCGCTGAAAGGAAAACTGCGCGGGCAGAAAATTGATGCCGCCGCAGAATTTTTTGGTGTCACGACGCCCATACGCCAGTCGTCATTTAATGTGGATTACGATTTACACTGGCGCAAAGCACCCTGGCAGCCAGATGAAGCGACGTTGAATGGCATCATTCATACTCAACTGGGTAAAGGCGAAATTACCGAAATCAATACCGGACATGCCGGGCAATTGCTGCGCTTATTGAGCGTAGATGCCCTGATGCGTAAGCTGCGTTTTGATTTCAGAGACACTTTTGGCGAAGGGTTCTATTTTGACTCCATTCGCAGCACCGCGTGGATTAAAGACGGCGTTATGCACACCGACGACACGCTGGTGGATGGCCTGGAGGCGGATATCGCCATGAAAGGGTCGGTAAATCTGGTACGTCGCGACCTGAATATGGAAGCGGTTGTCGCACCAGAGATTTCTGCGACGGTGGGCGTGGCTGCGGCTTTTGCGGTTAACCCCATTGTTGGCGCGGCAGTGTTTGCCGCCAGTAAAGTGCTGGGGCCGCTGTGGAGCAAAGTCTCCATTTTGCGCTATCACATTTCGGGTCCGCTGGACGATCCGCAAATCAACGAAGTGTTGCGCCAACCGCGTAAAGAAAAAGCGCAATGA", + "dna_sequence_length": 3801, + "functions": [ + "DUF3971-AsmA2 domains protein" + ], + "id": "CDS_3190", + "location": [ + [ + "NC_000913", + 3396258, + "-", + 3801 + ] + ], + "md5": "dfd350653ca0031d987f51e445713b69", + "parent_gene": "", + "protein_md5": "3376b5391c3e7f8dd5f2fa792ff910f6", + "protein_translation": "MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNNKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTASWFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNIELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRKEKAQ", + "protein_translation_length": 1266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010651" + ], + [ + "gene_synonym", + "ECK3235" + ], + [ + "gene_synonym", + "EcoGene:EG11299" + ], + [ + "gene_synonym", + "GI:90111563" + ], + [ + "gene_synonym", + "GeneID:947744" + ], + [ + "gene_synonym", + "JW3216" + ], + [ + "gene_synonym", + "NP_417713.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J0" + ], + [ + "gene_synonym", + "adhR" + ], + [ + "gene_synonym", + "b3247" + ], + [ + "gene_synonym", + "cafA" + ], + [ + "gene_synonym", + "rng" + ], + [ + "gene_synonym", + "yhdF" + ] + ], + "dna_sequence": "ATGACGGCTGAATTGTTAGTAAACGTAACGCCTTCGGAAACGCGAGTGGCGTATATTGATGGCGGTATTCTGCAGGAAATTCATATTGAACGTGAGGCGCGACGCGGAATAGTAGGCAATATCTACAAGGGTCGTGTAAGTCGTGTACTTCCGGGTATGCAGGCGGCTTTTGTAGATATTGGGCTGGATAAAGCCGCGTTTCTTCATGCATCCGACATCATGCCGCACACCGAATGTGTGGCGGGTGAAGAACAAAAGCAATTCACGGTGCGCGACATCTCGGAACTGGTTCGTCAGGGGCAAGATCTGATGGTGCAGGTGGTGAAAGATCCGCTTGGCACTAAAGGTGCGCGCCTGACCACCGATATCACGCTCCCTTCTCGCTATCTGGTGTTTATGCCAGGGGCTTCTCACGTTGGGGTTTCCCAACGTATTGAAAGCGAATCAGAACGTGAACGCCTGAAAAAAGTGGTCGCAGAGTATTGCGACGAGCAGGGCGGGTTTATCATCCGTACCGCAGCGGAAGGGGTTGGCGAGGCTGAACTGGCCTCCGATGCCGCTTATCTGAAACGCGTCTGGACCAAAGTTATGGAGCGTAAAAAACGCCCGCAGACCCGTTATCAGCTGTACGGCGAACTGGCGCTGGCGCAGCGTGTTCTGCGTGATTTCGCCGATGCCGAACTGGACCGCATTCGCGTTGACTCACGCCTGACTTACGAAGCGTTACTTGAGTTCACCTCGGAGTACATTCCCGAGATGACAAGCAAGCTGGAGCATTACACAGGACGCCAGCCGATTTTCGATCTCTTTGATGTCGAAAACGAAATCCAGCGAGCGCTGGAACGCAAAGTAGAACTGAAATCCGGTGGTTATCTCATTATCGACCAGACCGAAGCGATGACCACCGTGGACATCAATACCGGAGCGTTTGTCGGTCATCGCAATCTGGACGACACCATTTTCAATACCAATATTGAAGCGACGCAGGCTATCGCTCGCCAGTTACGGTTGCGTAATCTGGGCGGGATTATCATTATTGATTTCATCGATATGAATAATGAAGATCACCGCCGCCGAGTGCTGCACTCGCTGGAGCAGGCGTTGAGCAAAGACCGGGTGAAAACCAGCGTTAATGGTTTTTCGGCGCTGGGGCTGGTGGAGATGACGCGTAAACGCACCCGCGAAAGCATTGAGCACGTACTGTGTAACGAATGCCCAACCTGCCACGGTCGCGGAACGGTGAAAACCGTGGAAACGGTATGCTATGAAATCATGCGCGAGATTGTTCGTGTCCACCATGCTTACGACTCCGACCGTTTCCTGGTCTATGCTTCTCCGGCAGTAGCTGAAGCCTTGAAAGGCGAAGAGTCACACTCGCTGGCGGAAGTGGAAATTTTCGTTGGCAAACAGGTTAAAGTACAAATTGAACCGCTCTATAACCAGGAGCAGTTTGACGTCGTAATGATGTAA", + "dna_sequence_length": 1470, + "functions": [ + "ribonuclease G" + ], + "id": "CDS_3191", + "location": [ + [ + "NC_000913", + 3397795, + "-", + 1470 + ] + ], + "md5": "97d56193fc077b8b4a2354b1494090f8", + "parent_gene": "", + "protein_md5": "2d10212c414dea72e3a8a92fa95b0c70", + "protein_translation": "MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM", + "protein_translation_length": 489, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010653" + ], + [ + "gene_synonym", + "ECK3236" + ], + [ + "gene_synonym", + "EcoGene:EG11298" + ], + [ + "gene_synonym", + "GI:16131136" + ], + [ + "gene_synonym", + "GeneID:947753" + ], + [ + "gene_synonym", + "JW3217" + ], + [ + "gene_synonym", + "NP_417714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25536" + ], + [ + "gene_synonym", + "b3248" + ], + [ + "gene_synonym", + "maf" + ], + [ + "gene_synonym", + "yhdE" + ] + ], + "dna_sequence": "ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTATTGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCGCGCGAGAAAGCACGGGCAGGTGTCGCGCAAACGGCGAAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAACGGAGAAGTGCTGGAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACAGCAGTGGCGTTGGCCGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACATCGCGGGCTATGTCGCCAGCGATGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTCAGGAAGATAAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGCACTGCGTGAGAAAAGGGATAAACATGACGGCTGA", + "dna_sequence_length": 594, + "functions": [ + "dTTP/UTP pyrophosphatase", + "m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase" + ], + "id": "CDS_3192", + "location": [ + [ + "NC_000913", + 3398378, + "-", + 594 + ] + ], + "md5": "9dbcf58615b6aaf64cd154f04a10254a", + "parent_gene": "", + "protein_md5": "388c1f1c8f32ff750b138a39fd86c3d7", + "protein_translation": "MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010656" + ], + [ + "gene_synonym", + "ECK3237" + ], + [ + "gene_synonym", + "EcoGene:EG10610" + ], + [ + "gene_synonym", + "GI:16131137" + ], + [ + "gene_synonym", + "GeneID:947756" + ], + [ + "gene_synonym", + "JW3218" + ], + [ + "gene_synonym", + "NP_417715.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH4" + ], + [ + "gene_synonym", + "b3249" + ], + [ + "gene_synonym", + "mreD" + ] + ], + "dna_sequence": "GTGGCGAGCTATCGTAGCCAGGGACGCTGGGTAATCTGGCTCTCTTTCCTCATTGCGCTGTTGCTGCAAATCATGCCCTGGCCGGATAACCTGATTGTTTTCCGGCCAAACTGGGTGTTACTCATCTTGTTGTATTGGATCCTGGCCTTGCCTCATCGCGTAAATGTGGGCACAGGTTTTGTGATGGGTGCCATACTGGATCTGATCAGCGGCTCGACGCTTGGCGTACGCGTATTGGCGATGAGCATCATTGCTTACCTGGTGGCGCTGAAATACCAGCTTTTCCGCAACCTCGCATTATGGCAGCAGGCGCTGGTCGTCATGTTGCTTTCGCTGGTGGTGGATATTATTGTTTTCTGGGCAGAGTTTTTAGTGATTAACGTCTCTTTCAGACCGGAAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGCAAAGTCCGTCAGCAGTTTGCAGTGCAATAA", + "dna_sequence_length": 489, + "functions": [ + "cell wall structural complex MreBCD transmembrane component MreD" + ], + "id": "CDS_3193", + "location": [ + [ + "NC_000913", + 3398875, + "-", + 489 + ] + ], + "md5": "b8482cc7f0788c87474d4990e72d8a05", + "parent_gene": "", + "protein_md5": "80e07c188c1bb10742350560cbb3a770", + "protein_translation": "MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010658" + ], + [ + "gene_synonym", + "ECK3238" + ], + [ + "gene_synonym", + "EcoGene:EG10609" + ], + [ + "gene_synonym", + "GI:16131138" + ], + [ + "gene_synonym", + "GeneID:947655" + ], + [ + "gene_synonym", + "JW3219" + ], + [ + "gene_synonym", + "NP_417716.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16926" + ], + [ + "gene_synonym", + "b3250" + ], + [ + "gene_synonym", + "mreC" + ] + ], + "dna_sequence": "ATGAAGCCAATTTTTAGCCGTGGCCCGTCGCTACAGATTCGCCTTATTCTGGCGGTGCTGGTGGCGCTCGGCATTATTATTGCCGACAGCCGCCTGGGGACGTTCAGTCAAATCCGTACTTATATGGATACCGCCGTCAGTCCTTTCTACTTTGTTTCCAATGCTCCTCGTGAATTGCTGGATGGCGTATCGCAGACGCTGGCCTCGCGTGACCAATTAGAACTTGAAAACCGGGCGTTACGTCAGGAACTGTTGCTGAAAAACAGTGAACTGCTGATGCTTGGACAATACAAACAGGAGAACGCGCGTCTGCGCGAGCTGCTGGGTTCCCCGCTGCGTCAGGATGAGCAGAAAATGGTGACTCAGGTTATCTCCACGGTTAACGATCCTTATAGCGATCAAGTTGTTATCGATAAAGGTAGCGTTAATGGCGTTTATGAAGGCCAGCCGGTCATCAGCGACAAAGGTGTTGTTGGTCAGGTGGTGGCCGTCGCTAAACTGACCAGTCGCGTGCTGCTGATTTGTGATGCGACCCACGCGCTGCCAATCCAGGTGCTGCGCAACGATATCCGCGTAATTGCAGCCGGTAACGGTTGTACGGATGATTTGCAGCTTGAGCATCTGCCGGCGAATACGGATATTCGTGTTGGTGATGTGCTGGTGACTTCCGGTCTGGGCGGTCGTTTCCCGGAAGGCTATCCGGTCGCGGTTGTCTCTTCCGTAAAACTCGATACCCAGCGCGCTTATACTGTGATTCAGGCGCGTCCGACTGCAGGGCTGCAACGTTTGCGTTATCTGCTGCTGCTGTGGGGGGCAGATCGTAACGGCGCTAACCCGATGACGCCGGAAGAGGTGCATCGTGTTGCTAATGAACGTCTGATGCAGATGATGCCGCAGGTATTGCCTTCGCCAGACGCGATGGGGCCAAAGTTACCTGAACCGGCAACGGGGATCGCTCAGCCGACTCCGCAGCAACCGGCGACAGGAAATGCAGCTACTGCGCCTGCTGCGCCGACACAGCCTGCTGCTAATCGCTCTCCACAAAGGGCTACGCCGCCGCAAAGTGGTGCTCAACCGCCTGCGCGTGCGCCGGGAGGGCAATAG", + "dna_sequence_length": 1104, + "functions": [ + "cell wall structural complex MreBCD transmembrane component MreC" + ], + "id": "CDS_3194", + "location": [ + [ + "NC_000913", + 3399978, + "-", + 1104 + ] + ], + "md5": "39c275cd3a1980c22443d019141871dd", + "parent_gene": "", + "protein_md5": "8cc445bae9769447a19025001577e868", + "protein_translation": "MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPATGIAQPTPQQPATGNAATAPAAPTQPAANRSPQRATPPQSGAQPPARAPGGQ", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010661" + ], + [ + "gene_synonym", + "ECK3239" + ], + [ + "gene_synonym", + "EcoGene:EG10608" + ], + [ + "gene_synonym", + "GI:90111564" + ], + [ + "gene_synonym", + "GeneID:948588" + ], + [ + "gene_synonym", + "JW3220" + ], + [ + "gene_synonym", + "NP_417717.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9X4" + ], + [ + "gene_synonym", + "b3251" + ], + [ + "gene_synonym", + "envB" + ], + [ + "gene_synonym", + "mon" + ], + [ + "gene_synonym", + "mreB" + ], + [ + "gene_synonym", + "rodY" + ] + ], + "dna_sequence": "ATGTTGAAAAAATTTCGTGGCATGTTTTCCAATGACTTGTCCATTGACCTGGGTACTGCGAATACCCTCATTTATGTAAAAGGACAAGGCATCGTATTGAATGAGCCTTCCGTGGTGGCCATTCGTCAGGATCGTGCCGGTTCACCGAAAAGCGTAGCTGCAGTAGGTCATGACGCGAAGCAGATGCTGGGCCGTACGCCGGGCAATATTGCTGCCATTCGCCCAATGAAAGACGGCGTTATCGCCGACTTCTTCGTGACTGAAAAAATGCTCCAGCACTTCATCAAACAAGTGCACAGCAACAGCTTTATGCGTCCAAGCCCGCGCGTTCTGGTTTGTGTGCCGGTTGGCGCGACCCAGGTTGAACGCCGCGCAATTCGTGAATCCGCGCAGGGCGCTGGTGCCCGTGAAGTCTTCCTGATTGAAGAACCGATGGCTGCCGCAATTGGTGCTGGCCTGCCGGTTTCTGAAGCGACCGGTTCTATGGTGGTTGATATCGGTGGTGGTACCACTGAAGTTGCTGTTATCTCCTTGAACGGTGTGGTTTACTCCTCTTCTGTGCGCATTGGTGGTGACCGTTTCGACGAAGCTATCATCAACTATGTGCGTCGTAATTACGGTTCTCTGATCGGTGAAGCCACCGCAGAACGTATCAAGCACGAAATCGGTTCGGCTTATCCGGGCGATGAAGTCCGTGAAATCGAAGTTCGTGGCCGTAACCTGGCAGAAGGTGTTCCACGCGGTTTTACCCTGAACTCCAATGAAATCCTCGAAGCACTGCAGGAACCGCTGACCGGTATTGTGAGCGCGGTAATGGTTGCACTGGAACAGTGCCCGCCGGAACTGGCTTCCGACATCTCCGAGCGCGGCATGGTGCTCACCGGTGGTGGCGCACTGCTGCGTAACCTTGACCGTTTGTTAATGGAAGAAACCGGCATTCCAGTCGTTGTTGCTGAAGACCCGCTGACCTGTGTGGCGCGCGGTGGCGGCAAAGCGCTGGAAATGATCGACATGCACGGCGGCGACCTGTTCAGCGAAGAGTAA", + "dna_sequence_length": 1044, + "functions": [ + "cell wall structural complex MreBCD, actin-like component MreB" + ], + "id": "CDS_3195", + "location": [ + [ + "NC_000913", + 3401087, + "-", + 1044 + ] + ], + "md5": "0c294bc295119cd94c001771a0308486", + "parent_gene": "", + "protein_md5": "73d2ba4e5d849d4bc6ef9989dcc9beba", + "protein_translation": "MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE", + "protein_translation_length": 347, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010663" + ], + [ + "gene_synonym", + "ECK3240" + ], + [ + "gene_synonym", + "EcoGene:EG10018" + ], + [ + "gene_synonym", + "GI:16131140" + ], + [ + "gene_synonym", + "GeneID:947702" + ], + [ + "gene_synonym", + "JW3221" + ], + [ + "gene_synonym", + "NP_417718.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13518" + ], + [ + "gene_synonym", + "b3252" + ], + [ + "gene_synonym", + "csrD" + ], + [ + "gene_synonym", + "yhdA" + ] + ], + "dna_sequence": "ATGAGATTAACGACGAAATTTTCGGCCTTTGTTACGCTGCTCACCGGGTTAACAATTTTTGTGACTTTGCTGGGCTGTTCGCTAAGTTTCTACAACGCCATTCAGTATAAGTTTAGTCATCGCGTTCAGGCGGTGGCGACGGCGATTGATACCCACCTTGTGTCGAATGACTTCAGCGTATTAAGGCCACAAATTACCGAATTAATGATGTCGGCAGATATCGTTCGTGTAGACCTGCTCCATGGTGATAAACAGGTTTATACCCTGGCCAGAAATGGTAGTTATCGTCCAGTTGGCTCCAGCGATCTGTTTCGCGAACTGAGCGTTCCGTTGATAAAGCATCCGGGGATGTCGTTGCGTCTGGTTTATCAGGATCCGATGGGCAACTATTTCCATTCGTTGATGACCACCGCGCCGCTCACGGGGGCGATTGGCTTTATCATTGTTATGCTCTTCCTGGCGGTACGCTGGTTACAACGGCAACTTGCCGGGCAAGAATTGCTGGAAACCCGGGCTACTCGTATCTTAAACGGTGAGCGTGGCTCTAATGTGTTGGGAACCATCTATGAATGGCCGCCCAGAACCAGCAGTGCGCTGGATACGCTGCTTCGTGAAATTCAGAACGCACGCGAACAACACAGCCGTCTTGATACGCTGATCCGCTCTTATGCCGCCCAGGACGTGAAAACCGGCCTCAATAACCGACTCTTTTTCGATAATCAGTTAGCAACGTTACTGGAAGATCAGGAGAAAGTAGGTACCCACGGGATCGTGATGATGATTCGTCTGCCGGATTTCAATATGTTGAGCGATACCTGGGGGCACAGCCAGGTTGAAGAACAGTTCTTCACTCTGACGAATCTGCTGTCGACATTTATGATGCGCTACCCTGGCGCACTGCTGGCGCGTTACCACCGCAGTGATTTTGCTGCGCTGTTACCGCACCGGACGTTAAAAGAGGCAGAGAGCATCGCCGGTCAGTTAATCAAAGCCGTTGATACCTTGCCGAACAATAAAATGCTCGATCGCGACGATATGATCCACATTGGTATCTGCGCCTGGCGTAGTGGTCAGGATACCGAGCAGGTAATGGAACATGCAGAGTCTGCCACGCGTAATGCGGGATTGCAGGGCGGCAATAGCTGGGCTATTTACGATGACTCGTTGCCTGAAAAAGGACGCGGTAATGTTCGCTGGCGTACGCTTATCGAGCAAATGCTCAGTCGCGGCGGCCCGCGCCTTTATCAAAAACCGGCGGTTACTCGCGAAGGTCAGGTTCATCATCGCGAACTCATGTGCCGCATCTTCGATGGTAATGAAGAGGTTAGCTCGGCGGAGTATATGCCGATGGTCTTGCAGTTTGGCTTATCGGAAGAGTATGACCGTCTGCAAATCAGCCGTCTTATTCCACTATTGCGTTACTGGCCAGAGGAAAATCTGGCGATTCAGGTTACCGTTGAGTCGCTGATTCGCCCGCGTTTTCAGCGTTGGCTGCGCGATACGTTAATGCAATGTGAAAAATCACAACGAAAACGCATAATTATTGAACTTGCAGAGGCCGATGTAGGTCAACATATCAGTCGTTTACAACCTGTTATTCGTTTAGTGAATGCTTTAGGGGTACGGGTAGCCGTCAACCAGGCTGGTTTGACGCTGGTAAGTACCAGTTGGATCAAAGAACTTAATGTTGAGTTACTCAAGCTCCATCCGGGGCTGGTCAGAAACATTGAGAAGCGAACGGAGAACCAGCTGCTGGTTCAAAGCCTGGTGGAAGCCTGCTCCGGGACCAGCACCCAGGTTTACGCCACCGGCGTGCGTTCGCGAAGCGAGTGGCAGACCCTGATTCAGCGCGGTGTTACAGGCGGGCAAGGGGATTTTTTCGCGTCCTCACAGCCACTTGATACTAACGTGAAAAAATATTCACAAAGATACTCGGTTTAA", + "dna_sequence_length": 1941, + "functions": [ + "targeting factor for csrBC sRNA degradation" + ], + "id": "CDS_3196", + "location": [ + [ + "NC_000913", + 3403332, + "-", + 1941 + ] + ], + "md5": "92e6a81ef3145ef98ca9797de0ad0dfd", + "parent_gene": "", + "protein_md5": "5f0729a801c84209f14f33e4a3e340f8", + "protein_translation": "MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFSVLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV", + "protein_translation_length": 646, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010667" + ], + [ + "gene_synonym", + "ECK3241" + ], + [ + "gene_synonym", + "EcoGene:EG11315" + ], + [ + "gene_synonym", + "GI:16131141" + ], + [ + "gene_synonym", + "GeneID:947848" + ], + [ + "gene_synonym", + "JW3222" + ], + [ + "gene_synonym", + "NP_417719.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26646" + ], + [ + "gene_synonym", + "acuI" + ], + [ + "gene_synonym", + "b3253" + ], + [ + "gene_synonym", + "yhdH" + ] + ], + "dna_sequence": "ATGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAAGATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCGTGACGGGTGCCAGTGGTGGCGTCGGCAGTACCGCCGTGGCGCTGCTGCATAAGTTGGGTTATCAGGTCGTTGCCGTTTCCGGTCGCGAAAGTACCCATGAATATCTGAAAAGTTTAGGTGCTAGCCGTGTTCTCCCTCGTGATGAGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACTCTGCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATCATTCTATACCCAGGCGGCAAAAGAGATATCTCTGTCAGAGGCACCGAACTTTGCCGAGGCCATCATTAATAACCAGATCCAGGGTCGCACGCTGGTGAAGGTTAACTAA", + "dna_sequence_length": 975, + "functions": [ + "putative acryloyl-CoA reductase" + ], + "id": "CDS_3197", + "location": [ + [ + "NC_000913", + 3403484, + "+", + 975 + ] + ], + "md5": "b423e4df8b0d1774e9839da395aa8f71", + "parent_gene": "", + "protein_md5": "62169f87c02bc4c162ea1adb1fec4587", + "protein_translation": "MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4509" + ], + [ + "gene_synonym", + "EcoGene:EG14497" + ], + [ + "gene_synonym", + "GeneID:7751640" + ], + [ + "gene_synonym", + "b4697" + ], + [ + "gene_synonym", + "yrdF" + ] + ], + "dna_sequence": "TTGAAATCATTATTCAATCGGTTAACGGGAAAAGCGGTTAGCCGGACAGCTTTCGTCGAACACCTTGGTCAGGAAGTTATACAACATCATCCAAACTGGAAAGTCATGATTTCGACTGACCACAAATTGATGCGCATTGATAC", + "dna_sequence_length": 143, + "id": "CDS_3198", + "location": [ + [ + "NC_000913", + 3404495, + "+", + 143 + ] + ], + "md5": "aa445098c55eb082966f24e56bc9abf2", + "parent_gene": "", + "protein_md5": "8b2488951a8fecb16ffbc2a8a660b049", + "protein_translation": "LKSLFNRLTGKAVSRTAFVEHLGQEVIQHHPNWKVMISTDHKLMRID", + "protein_translation_length": 47, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285243" + ], + [ + "gene_synonym", + "ECK4442" + ], + [ + "gene_synonym", + "EcoGene:EG14352" + ], + [ + "gene_synonym", + "GeneID:5625572" + ], + [ + "gene_synonym", + "b4646" + ], + [ + "gene_synonym", + "yrdE" + ] + ], + "dna_sequence": "TCCACTAAACAGCTATTATTGATACGCCTCCGTCGCCTGTTAGGTTTATGTTGCTTTGCCTGGGCGACGCTACGCTTAGCCCCTTACTTATTTCTGTGGTACCATGGGGTGAATAATCTGATTTTGTTTGACTACAAATTAATCACTCGAACCTATTTAATGCTGAGCATTGTCAATCGGTTAATTTTGCGTGCTTTAGCATTCACATCTATCCAGACGATGCAGTGAAAATTGGGTAATCCCCAGCAACCGCTGCGTAATGTCGTCTATCTTGTCGCGATCCTGGCATCCCTACATTATTTGTGGTCTGTGAAGATTATCTCATTGCAGCCCCTCATCTTCGCAGGGCTGGCTTTTCAGCTTTTCACCTTACGTTATAAGAAGTTCCGTCGATGA", + "dna_sequence_length": 396, + "id": "CDS_3199", + "location": [ + [ + "NC_000913", + 3404638, + "+", + 96 + ], + [ + "NC_000913", + 3404732, + "+", + 300 + ] + ], + "md5": "a38b65f316557a4ac0f02cdc687c930c", + "parent_gene": "", + "protein_md5": "67c87fde2a747af0256f0d8ecd57fcfb", + "protein_translation": "STKQLLLIRLRRLLGLCCFAWATLRLAPYLFLWYHGVNNLILFDYKLITRTYLMLSIVNRLILRALAFTSIQTMQ", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010675" + ], + [ + "gene_synonym", + "ECK3242" + ], + [ + "gene_synonym", + "EcoGene:EG10275" + ], + [ + "gene_synonym", + "GI:16131143" + ], + [ + "gene_synonym", + "GeneID:947758" + ], + [ + "gene_synonym", + "JW3223" + ], + [ + "gene_synonym", + "NP_417721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD8" + ], + [ + "gene_synonym", + "accB" + ], + [ + "gene_synonym", + "b3255" + ], + [ + "gene_synonym", + "fabE" + ] + ], + "dna_sequence": "ATGGATATTCGTAAGATTAAAAAACTGATCGAGCTGGTTGAAGAATCAGGCATCTCCGAACTGGAAATTTCTGAAGGCGAAGAGTCAGTACGCATTAGCCGTGCAGCTCCTGCCGCAAGTTTCCCTGTGATGCAACAAGCTTACGCTGCACCAATGATGCAGCAGCCAGCTCAATCTAACGCAGCCGCTCCGGCGACCGTTCCTTCCATGGAAGCGCCAGCAGCAGCGGAAATCAGTGGTCACATCGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAACCGGTAGAATTTGACGAGCCGCTGGTCGTCATCGAGTAA", + "dna_sequence_length": 471, + "functions": [ + "acetyl CoA carboxylase, BCCP subunit" + ], + "id": "CDS_3200", + "location": [ + [ + "NC_000913", + 3405436, + "+", + 471 + ] + ], + "md5": "28da7a424bb82ef71d3043cfb1c622b0", + "parent_gene": "", + "protein_md5": "36871dcfe1571efa43dd6a24b6f8caf0", + "protein_translation": "MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010677" + ], + [ + "gene_synonym", + "ECK3243" + ], + [ + "gene_synonym", + "EcoGene:EG10276" + ], + [ + "gene_synonym", + "GI:16131144" + ], + [ + "gene_synonym", + "GeneID:947761" + ], + [ + "gene_synonym", + "JW3224" + ], + [ + "gene_synonym", + "NP_417722.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24182" + ], + [ + "gene_synonym", + "accC" + ], + [ + "gene_synonym", + "b3256" + ], + [ + "gene_synonym", + "fabG" + ] + ], + "dna_sequence": "ATGCTGGATAAAATTGTTATTGCCAACCGCGGCGAGATTGCATTGCGTATTCTTCGTGCCTGTAAAGAACTGGGCATCAAGACTGTCGCTGTGCACTCCAGCGCGGATCGCGATCTAAAACACGTATTACTGGCAGATGAAACGGTCTGTATTGGCCCTGCTCCGTCAGTAAAAAGTTATCTGAACATCCCGGCAATCATCAGCGCCGCTGAAATCACCGGCGCAGTAGCAATCCATCCGGGTTACGGCTTCCTCTCCGAGAACGCCAACTTTGCCGAGCAGGTTGAACGCTCCGGCTTTATCTTCATTGGCCCGAAAGCAGAAACCATTCGCCTGATGGGCGACAAAGTATCCGCAATCGCGGCGATGAAAAAAGCGGGCGTCCCTTGCGTACCGGGTTCTGACGGCCCGCTGGGCGACGATATGGATAAAAACCGTGCCATTGCTAAACGCATTGGTTATCCGGTGATTATCAAAGCCTCCGGCGGCGGCGGCGGTCGCGGTATGCGCGTAGTGCGCGGCGACGCTGAACTGGCACAATCCATCTCCATGACCCGTGCGGAAGCGAAAGCTGCTTTCAGCAACGATATGGTTTACATGGAGAAATACCTGGAAAATCCTCGCCACGTCGAGATTCAGGTACTGGCTGACGGTCAGGGCAACGCTATCTATCTGGCGGAACGTGACTGCTCCATGCAACGCCGCCACCAGAAAGTGGTCGAAGAAGCGCCAGCACCGGGCATTACCCCGGAACTGCGTCGCTACATCGGCGAACGTTGCGCTAAAGCGTGTGTTGATATCGGCTATCGCGGTGCAGGTACTTTCGAGTTCCTGTTCGAAAACGGCGAGTTCTATTTCATCGAAATGAACACCCGTATTCAGGTAGAACACCCGGTTACAGAAATGATCACCGGCGTTGACCTGATCAAAGAACAGCTGCGTATCGCTGCCGGTCAACCGCTGTCGATCAAGCAAGAAGAAGTTCACGTTCGCGGCCATGCGGTGGAATGTCGTATCAACGCCGAAGATCCGAACACCTTCCTGCCAAGTCCGGGCAAAATCACCCGTTTCCACGCACCTGGCGGTTTTGGCGTACGTTGGGAGTCTCATATCTACGCGGGCTACACCGTACCGCCGTACTATGACTCAATGATCGGTAAGCTGATTTGCTACGGTGAAAACCGTGACGTGGCGATTGCCCGCATGAAGAATGCGCTGCAGGAGCTGATCATCGACGGTATCAAAACCAACGTTGATCTGCAGATCCGCATCATGAATGACGAGAACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAA", + "dna_sequence_length": 1350, + "functions": [ + "acetyl-CoA carboxylase, biotin carboxylase subunit" + ], + "id": "CDS_3201", + "location": [ + [ + "NC_000913", + 3405917, + "+", + 1350 + ] + ], + "md5": "a526fecca959be73cce3532075783749", + "parent_gene": "", + "protein_md5": "41dd90eee557d2a8128cce90ddaca9a8", + "protein_translation": "MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK", + "protein_translation_length": 449, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010690" + ], + [ + "gene_synonym", + "ECK3244" + ], + [ + "gene_synonym", + "EcoGene:EG12831" + ], + [ + "gene_synonym", + "GI:16131145" + ], + [ + "gene_synonym", + "GeneID:947762" + ], + [ + "gene_synonym", + "JW3225" + ], + [ + "gene_synonym", + "NP_417723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45566" + ], + [ + "gene_synonym", + "b3257" + ], + [ + "gene_synonym", + "yhdT" + ] + ], + "dna_sequence": "ATGGACACTCGTTTTGTTCAGGCCCATAAAGAGGCGCGCTGGGCGCTGGGGCTGACCCTTTTGTATCTGGCAGTTTGGTTAGTAGCCGCTTACTTATCTGGCGTTGCCCCCGGTTTTACCGGCTTTCCGCGCTGGTTTGAGATGGCCTGCATCCTGACGCCGCTGCTGTTTATTGGACTGTGCTGGGCGATGGTGAAATTTATCTATCGCGATATCCCACTGGAGGATGACGATGCAGCTTGA", + "dna_sequence_length": 243, + "functions": [ + "DUF997 family putative inner membrane protein" + ], + "id": "CDS_3202", + "location": [ + [ + "NC_000913", + 3407375, + "+", + 243 + ] + ], + "md5": "498e2802303775c1fbe7e1ac4f49c1a5", + "parent_gene": "", + "protein_md5": "345eb4fa521090ef985ca04cddd5ea81", + "protein_translation": "MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010695" + ], + [ + "gene_synonym", + "ECK3245" + ], + [ + "gene_synonym", + "EcoGene:EG10685" + ], + [ + "gene_synonym", + "GI:90111565" + ], + [ + "gene_synonym", + "GeneID:947752" + ], + [ + "gene_synonym", + "JW3226" + ], + [ + "gene_synonym", + "NP_417724.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16256" + ], + [ + "gene_synonym", + "b3258" + ], + [ + "gene_synonym", + "panF" + ] + ], + "dna_sequence": "ATGCAGCTTGAAGTAATTCTACCGCTGGTCGCCTATCTGGTGGTGGTGTTCGGTATCTCGGTTTATGCGATGCGTAAACGGAGCACCGGCACCTTCCTTAATGAGTATTTCCTCGGCAGCCGCTCTATGGGCGGTATTGTGCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCTGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGCGCCGCTACAATGCAGTGACGCTGAACGATATGCTGTTTGCCCGCTACCAGAGTCGTCTTCTGGTGTGGCTGGCGAGTTTGAGTTTGCTGGTTGCGTTCGTTGGTGCGATGACCGTGCAGTTTATCGGCGGTGCGCGCCTGCTGGAAACCGCGGCGGGTATTCCTTATGAAACCGGGCTGCTGATTTTTGGTATCAGCATTGCGTTATATACCGCCTTTGGTGGCTTTCGCGCCAGCGTGCTGAACGACACCATGCAAGGGCTTGTGATGCTGATTGGCACCGTTGTGCTGCTTATTGGCGTAGTACATGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTATCTCTTATAAAGACAGCAAAGCCGTACATCGGGGGATCATCATCGGTACGATTGTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCACCGTTTGCTGCCGGGATCTTCCTGGCTGCACCGATGGCTGCGATCATGTCGACAATTAACGCCCAACTGCTGCAAAGTTCCGCTACGATCATTAAAGATCTCTATCTGAATATCCGTCCGGATCAAATGCAAAACGAGACGCGTCTGAAGCGGATGTCGGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGACGCTGAATATTCAGTACCTGGGCTTCCACCCTATCGTGCCCTCGTTACTACTAAGTTTGCTGGCTTTCCTGGTCGGAAACCGTTTCGGTACATCCGTCCCGCAAGCTACCGTTTTGACTACTGATAAATAA", + "dna_sequence_length": 1452, + "functions": [ + "pantothenate:sodium symporter" + ], + "id": "CDS_3203", + "location": [ + [ + "NC_000913", + 3407607, + "+", + 1452 + ] + ], + "md5": "91862d562d50201345caac932f5a3014", + "parent_gene": "", + "protein_md5": "a787f761458c17db19fb243118344707", + "protein_translation": "MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010697" + ], + [ + "gene_synonym", + "ECK3246" + ], + [ + "gene_synonym", + "EcoGene:EG11497" + ], + [ + "gene_synonym", + "GI:16131147" + ], + [ + "gene_synonym", + "GeneID:947708" + ], + [ + "gene_synonym", + "JW3227" + ], + [ + "gene_synonym", + "NP_417725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8T1" + ], + [ + "gene_synonym", + "b3259" + ], + [ + "gene_synonym", + "prm-1" + ], + [ + "gene_synonym", + "prmA" + ], + [ + "gene_synonym", + "yhdI" + ] + ], + "dna_sequence": "ATGCCTTGGATCCAACTGAAACTGAACACCACCGGCGCGAACGCGGAAGATCTTAGCGATGCGCTGATGGAAGCGGGTGCCGTTTCTATCACTTTTCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTGGGGCGACACCGATGTGATTGGTCTGTTCGACGCTGAAACCGATATGAACGACGTGGTGGCGATTCTGGAAAACCATCCGCTGCTCGGCGCAGGCTTCGCGCATAAAATCGAACAACTAGAAGATAAAGACTGGGAGCGCGAATGGATGGATAATTTCCACCCGATGCGCTTTGGTGAACGACTGTGGATCTGCCCTAGCTGGCGTGATGTGCCGGACGAAAACGCCGTCAACGTGATGTTAGATCCAGGGCTGGCGTTTGGTACGGGTACCCATCCAACCACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTTCTGACCGTCTGGAACTCTACTTACCGAAAGATCAGCCAGAAGAAATGAAAGCCGACGTGGTGGTCGCTAACATCCTTGCAGGCCCATTACGTGAACTGGCACCGTTAATCAGCGTCCTGCCGGTTTCAGGCGGTTTGCTGGGCCTTTCCGGTATTCTGGCAAGCCAGGCAGAGAGCGTTTGTGAAGCTTATGCCGATAGCTTCGCACTGGACCCGGTCGTGGAAAAAGAAGAGTGGTGCCGTATTACCGGTCGTAAGAATTAA", + "dna_sequence_length": 882, + "functions": [ + "methyltransferase for 50S ribosomal subunit protein L11" + ], + "id": "CDS_3204", + "location": [ + [ + "NC_000913", + 3409070, + "+", + 882 + ] + ], + "md5": "e90f2a2e7907ba938637ba53439875c7", + "parent_gene": "", + "protein_md5": "1a5b4cfd7c254375c6ea0f23a4f8d07d", + "protein_translation": "MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010700" + ], + [ + "gene_synonym", + "ECK3247" + ], + [ + "gene_synonym", + "EcoGene:EG11311" + ], + [ + "gene_synonym", + "GI:16131148" + ], + [ + "gene_synonym", + "GeneID:947707" + ], + [ + "gene_synonym", + "JW3228" + ], + [ + "gene_synonym", + "NP_417726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABT5" + ], + [ + "gene_synonym", + "b3260" + ], + [ + "gene_synonym", + "dusB" + ], + [ + "gene_synonym", + "yhdG" + ] + ], + "dna_sequence": "ATGCGCATCGGACAATATCAGCTCAGAAATCGCCTGATCGCAGCGCCCATGGCTGGCATTACAGACAGACCTTTTCGGACGTTGTGCTACGAGATGGGAGCCGGATTGACAGTATCCGAGATGATGTCTTCTAACCCACAGGTTTGGGAAAGCGACAAATCTCGTTTACGGATGGTGCACATTGATGAACCCGGTATTCGCACCGTGCAAATTGCTGGTAGCGATCCGAAAGAAATGGCAGATGCAGCACGTATTAACGTGGAAAGCGGTGCCCAGATTATTGATATCAATATGGGTTGCCCGGCTAAAAAAGTGAATCGCAAGCTCGCAGGTTCAGCCCTCTTGCAGTACCCGGATGTCGTTAAATCGATCCTTACCGAGGTCGTCAATGCAGTGGACGTTCCTGTTACCCTGAAGATTCGCACCGGCTGGGCACCGGAACACCGTAACTGCGAAGAGATTGCCCAACTGGCTGAAGACTGTGGCATTCAGGCTCTGACCATTCATGGCCGTACACGCGCCTGTTTGTTCAATGGAGAAGCTGAGTACGACAGTATTCGGGCAGTTAAGCAGAAAGTTTCCATTCCGGTTATCGCGAATGGCGACATTACTGACCCGCTTAAAGCCAGAGCTGTGCTCGACTATACAGGGGCGGATGCCCTGATGATAGGCCGCGCAGCTCAGGGAAGACCCTGGATCTTTCGGGAAATCCAGCATTATCTGGACACTGGGGAGTTGCTGCCCCCGCTGCCTTTGGCAGAGGTTAAGCGCTTGCTTTGCGCGCACGTTCGGGAACTGCATGACTTTTATGGTCCGGCAAAAGGGTACCGAATTGCACGTAAACACGTTTCCTGGTATCTCCAGGAACACGCTCCAAATGACCAGTTTCGGCGCACATTCAACGCCATTGAGGATGCCAGCGAACAGCTGGAGGCGTTGGAGGCATACTTCGAAAATTTTGCGTAA", + "dna_sequence_length": 966, + "functions": [ + "tRNA-dihydrouridine synthase B" + ], + "id": "CDS_3205", + "location": [ + [ + "NC_000913", + 3410280, + "+", + 966 + ] + ], + "md5": "24871a556dc47fb208c40faae7ed2d3f", + "parent_gene": "", + "protein_md5": "b4444db13d93a430c75b1f22d9459e45", + "protein_translation": "MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010703" + ], + [ + "gene_synonym", + "ECK3248" + ], + [ + "gene_synonym", + "EcoGene:EG10317" + ], + [ + "gene_synonym", + "GI:16131149" + ], + [ + "gene_synonym", + "GeneID:947697" + ], + [ + "gene_synonym", + "JW3229" + ], + [ + "gene_synonym", + "NP_417727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6R3" + ], + [ + "gene_synonym", + "b3261" + ], + [ + "gene_synonym", + "fis" + ], + [ + "gene_synonym", + "nbp" + ] + ], + "dna_sequence": "ATGTTCGAACAACGCGTAAATTCTGACGTACTGACCGTTTCTACCGTTAACTCTCAGGATCAGGTAACCCAAAAACCCCTGCGTGACTCGGTTAAACAGGCACTGAAGAACTATTTTGCTCAACTGAATGGTCAGGATGTGAATGACCTCTATGAGCTGGTACTGGCTGAAGTAGAACAGCCCCTGTTGGACATGGTGATGCAATACACCCGTGGTAACCAGACCCGTGCTGCGCTGATGATGGGCATCAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAA", + "dna_sequence_length": 297, + "functions": [ + "global DNA-binding transcriptional dual regulator" + ], + "id": "CDS_3206", + "location": [ + [ + "NC_000913", + 3411271, + "+", + 297 + ] + ], + "md5": "9fae3a25ba8e985ccd9e0c150a58ab70", + "parent_gene": "", + "protein_md5": "e9ff87b2f6cbc07850e519f60813e1f6", + "protein_translation": "MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010706" + ], + [ + "gene_synonym", + "ECK3249" + ], + [ + "gene_synonym", + "EcoGene:EG11498" + ], + [ + "gene_synonym", + "GI:90111566" + ], + [ + "gene_synonym", + "GeneID:947695" + ], + [ + "gene_synonym", + "JW5543" + ], + [ + "gene_synonym", + "NP_417728.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28638" + ], + [ + "gene_synonym", + "b3262" + ], + [ + "gene_synonym", + "ccrM" + ], + [ + "gene_synonym", + "yhdJ" + ] + ], + "dna_sequence": "ATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCACGGTGATGCGCTTGCCGAACTTAAAAAGATCCCCGCCGAAAGTGTCGATCTGATCTTTGCCGACCCACCATATAACATCGGTAAAAATTTTGATGGTCTGATCGAAGCCTGGAAAGAAGATCTGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGGCAGCATGTACATCATGAACAGTACGGAAAACATGCCCTTTATCGATCTCCAGTGCCGCAAGCTTTTTACCATCAAAAGTCGCATCGTCTGGTCATATGACAGTTCTGGAGTGCAGGCGAAAAAACACTACGGCTCCATGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCACAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCTTCCAACCCAGGCGATATCGTTCTCGACCCGTTTGCTGGTAGCTTTACTACCGGTGCCGTAGCCATCGCCAGCGGACGAAAATTCATTGGTATTGAGATCAACAGCGAGTACATCAAAATGGGGCTTCGACGGCTGGATGTCGCGTCGCATTACTCTGCGGAAGAACTGGCGAAAGTGAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAA", + "dna_sequence_length": 885, + "functions": [ + "DNA adenine methyltransferase, SAM-dependent" + ], + "id": "CDS_3207", + "location": [ + [ + "NC_000913", + 3411653, + "+", + 885 + ] + ], + "md5": "c1ba2f9484dd9083474458719d15485c", + "parent_gene": "", + "protein_md5": "b9a42086d8fdb357e6d916201ff8c92d", + "protein_translation": "MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYNIGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLFTIKSRIVWSYDSSGVQAKKHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALIDYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIVLDPFAGSFTTGAVAIASGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTGNLSKRSRLSEVDPDLITK", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010710" + ], + [ + "gene_synonym", + "ECK3250" + ], + [ + "gene_synonym", + "EcoGene:EG12832" + ], + [ + "gene_synonym", + "GI:16131151" + ], + [ + "gene_synonym", + "GeneID:947700" + ], + [ + "gene_synonym", + "JW3231" + ], + [ + "gene_synonym", + "NP_417729.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64619" + ], + [ + "gene_synonym", + "b3263" + ], + [ + "gene_synonym", + "yhdU" + ] + ], + "dna_sequence": "ATGATTCGCAAGTATTGGTGGCTCGTCGTTTTCGCTGTCTTCGTTTTTCTGTTTGATACTTTACTGATGCAGTGGATTGAACTGCTGGCAACAGAAACAGACAAATGCCGCAATATGAACTCAGTTAATCCACTAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGA", + "dna_sequence_length": 180, + "functions": [ + "putative membrane protein" + ], + "id": "CDS_3208", + "location": [ + [ + "NC_000913", + 3412621, + "+", + 180 + ] + ], + "md5": "fc526b1de70a2e512cf07ad773f3d867", + "parent_gene": "", + "protein_md5": "105503ec0a857ae7f390413c9c7c874c", + "protein_translation": "MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM", + "protein_translation_length": 59, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010712" + ], + [ + "gene_synonym", + "ECK3251" + ], + [ + "gene_synonym", + "EcoGene:EG11741" + ], + [ + "gene_synonym", + "GI:16131152" + ], + [ + "gene_synonym", + "GeneID:947704" + ], + [ + "gene_synonym", + "JW3232" + ], + [ + "gene_synonym", + "NP_417730.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACT2" + ], + [ + "gene_synonym", + "acrS" + ], + [ + "gene_synonym", + "b3264" + ], + [ + "gene_synonym", + "envR" + ], + [ + "gene_synonym", + "yhdK" + ] + ], + "dna_sequence": "ATGGCAAAAAGAACCAAAGCCGAAGCTCTGAAGACCCGGCAAGAACTGATTGAAACTGCCATCGCCCAGTTTGCGCAGCATGGCGTAAGCAAGACGACGCTCAACGACATTGCCGACGCCGCTAACGTTACGCGTGGCGCTATCTACTGGCACTTCGAAAACAAGACTCAACTGTTTAATGAGATGTGGTTGCAACAGCCTTCATTGCGGGAGTTAATCCAGGAACACTTGACGGCTGGATTAGAGCATGACCCGTTTCAACAATTGCGTGAAAAATTGATTGTCGGCTTGCAATATATTGCCAAAATTCCCCGCCAGCAGGCGTTGCTGAAAATCTTATATCACAAATGTGAATTTAATGATGAGATGCTGGCCGAGGGAGTGATACGCGAAAAGATGGGCTTTAATCCGCAGACTCTCCGCGAAGTATTGCAGGCGTGTCAGCAACAAGGTTGTGTAGCAAATAACCTCGATTTAGATGTTGTGATGATTATTATTGATGGTGCCTTCAGCGGAATTGTTCAAAACTGGTTAATGAATATGGCGGGTTATGATCTTTATAAACAAGCCCCCGCTCTGGTCGATAACGTATTAAGAATGTTCATGCCAGATGAAAACATAACGAAATTAATTCATCAAACGAATGAATTAAGTGTCATGTAA", + "dna_sequence_length": 663, + "functions": [ + "acrAB operon transcriptional repressor" + ], + "id": "CDS_3209", + "location": [ + [ + "NC_000913", + 3413465, + "-", + 663 + ] + ], + "md5": "e258c6c4a2422b407135e9240e95e1ca", + "parent_gene": "", + "protein_md5": "955dd71932630ce6c7f65e0defb3d306", + "protein_translation": "MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010722" + ], + [ + "gene_synonym", + "ECK3252" + ], + [ + "gene_synonym", + "EcoGene:EG10266" + ], + [ + "gene_synonym", + "GI:16131153" + ], + [ + "gene_synonym", + "GeneID:947706" + ], + [ + "gene_synonym", + "JW3233" + ], + [ + "gene_synonym", + "NP_417731.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24180" + ], + [ + "gene_synonym", + "acrE" + ], + [ + "gene_synonym", + "b3265" + ], + [ + "gene_synonym", + "envC" + ] + ], + "dna_sequence": "ATGACGAAACATGCCAGGTTTTTCCTCCTGCCCTCCTTTATTCTGATCTCCGCGGCTTTAATCGCCGGTTGTAACGATAAGGGAGAAGAGAAAGCTCACGTCGGTGAACCGCAGGTTACCGTTCATATTGTAAAAACGGCCCCGTTAGAAGTTAAGACTGAATTACCAGGCCGCACCAATGCTTATCGTATAGCCGAAGTTCGCCCACAGGTTAGCGGGATCGTACTGAATCGCAATTTCACTGAAGGCAGCGATGTGCAAGCAGGCCAGTCCCTGTACCAGATCGATCCCGCGACCTATCAGGCAAATTATGACAGCGCGAAAGGCGAACTGGCGAAAAGTGAAGCCGCCGCCGCCATCGCGCATTTGACGGTAAAACGTTACGTTCCGCTCGTGGGTACGAAATACATCAGCCAGCAGGAGTACGACCAGGCCATTGCTGATGCTCGTCAGGCCGATGCCGCCGTGATTGCCGCAAAAGCCACAGTCGAAAGCGCTCGCATCAATCTTGCTTATACCAAAGTCACTGCGCCAATTAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAGAGTTGGTCATGGAAAACGGTCAAACCTATCCCCTGAAAGGTACGCTGCAATTCTCCGATGTGACCGTTGATGAAAGCACCGGCTCCATAACCCTACGTGCTGTCTTCCCTAACCCGCAACATACGCTTTTGCCGGGTATGTTTGTGCGTGCACGGATTGATGAAGGCGTCCAACCTGACGCCATTCTTATCCCGCAACAAGGCGTTAGCCGCACACCGCGTGGTGATGCAACCGTGCTGATTGTTAACGATAAAAGTCAGGTTGAAGCGCGCCCTGTCGTTGCCAGTCAGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAA", + "dna_sequence_length": 1158, + "functions": [ + "cytoplasmic membrane lipoprotein" + ], + "id": "CDS_3210", + "location": [ + [ + "NC_000913", + 3413864, + "+", + 1158 + ] + ], + "md5": "03dde278326822c02a0bb742cf0a839f", + "parent_gene": "", + "protein_md5": "01051bed14d6f4398c6990af584e887e", + "protein_translation": "MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010724" + ], + [ + "gene_synonym", + "ECK3253" + ], + [ + "gene_synonym", + "EcoGene:EG10267" + ], + [ + "gene_synonym", + "GI:16131154" + ], + [ + "gene_synonym", + "GeneID:947768" + ], + [ + "gene_synonym", + "JW3234" + ], + [ + "gene_synonym", + "NP_417732.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24181" + ], + [ + "gene_synonym", + "acrF" + ], + [ + "gene_synonym", + "b3266" + ], + [ + "gene_synonym", + "envD" + ] + ], + "dna_sequence": "ATGGCAAACTTTTTTATTCGACGACCGATATTTGCATGGGTGCTGGCCATTATTCTGATGATGGCGGGCGCACTGGCGATCCTACAATTGCCCGTCGCTCAGTATCCAACAATTGCACCGCCTGCGGTTTCTGTTTCAGCAAACTATCCGGGCGCTGATGCGCAGACCGTGCAGGATACGGTGACGCAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTATATGTCCTCCACCAGCGATTCCGCCGGTAGCGTGACAATTACCCTTACCTTCCAGTCCGGGACCGATCCTGATATCGCGCAAGTGCAGGTGCAGAACAAACTCCAGCTCGCCACGCCGTTGCTGCCGCAGGAGGTTCAGCAGCAGGGGATCAGTGTTGAAAAGTCCAGTAGCAGCTATTTGATGGTGGCGGGCTTTGTCTCTGATAACCCAGGCACCACACAGGACGATATCTCGGACTATGTGGCCTCTAACGTTAAAGATACGCTTAGCCGTCTGAATGGCGTCGGTGACGTACAGCTTTTCGGCGCACAGTATGCGATGCGTATCTGGCTGGATGCCGATCTGCTAAACAAATATAAACTGACACCGGTTGATGTGATTAACCAGTTGAAGGTACAGAACGATCAGATCGCTGCCGGACAGTTGGGCGGAACGCCAGCGTTACCAGGGCAACAATTGAACGCCTCGATTATTGCTCAGACGCGGTTTAAAAATCCGGAAGAATTCGGCAAAGTGACCCTGCGCGTAAACAGTGACGGCTCGGTGGTACGCCTGAAAGATGTCGCACGGGTTGAACTTGGCGGTGAAAACTATAACGTTATCGCTCGTATCAACGGAAAACCGGCGGCGGGCCTGGGGATTAAGCTGGCAACCGGCGCGAATGCTCTCGATACCGCGAAAGCCATTAAGGCAAAACTGGCGGAATTACAGCCATTCTTCCCGCAGGGAATGAAGGTTCTCTACCCTTATGACACCACGCCATTCGTCCAGCTTTCTATTCACGAAGTGGTAAAAACGCTGTTCGAAGCCATTATGCTGGTGTTCCTGGTGATGTATCTGTTCTTGCAGAATATGCGAGCAACGCTGATCCCCACCATTGCGGTACCCGTGGTGTTGTTAGGGACGTTTGCCATCCTCGCCGCTTTTGGTTACTCCATCAACACACTAACGATGTTCGGGATGGTGCTTGCCATCGGGCTGCTCGTCGATGATGCGATAGTGGTGGTGGAGAACGTCGAGCGCGTGATGATGGAGGATAAGCTCCCGCCAAAAGAAGCGACGGAAAAATCGATGTCGCAAATTCAGGGCGCACTGGTGGGTATCGCGATGGTGCTGTCAGCGGTATTTATTCCGATGGCATTCTTCGGCGGTTCTACTGGGGCAATTTATCGCCAGTTCTCTATCACCATCGTTTCGGCAATGGCGCTTTCTGTTCTGGTGGCATTGATTCTTACCCCTGCGTTATGTGCAACGCTGCTTAAACCCGTCTCTGCTGAGCATCACGAAAATAAGGGCGGTTTCTTCGGTTGGTTTAATACCACCTTCGATCATAGCGTTAACCACTACACCAACAGCGTCGGCAAAATCCTCGGATCCACAGGACGATATTTACTGATCTATGCGCTGATTGTTGCAGGAATGGTGGTGTTGTTTTTACGTCTTCCGTCTTCCTTCTTACCTGAAGAGGATCAGGGTGTCTTTCTGACCATGATTCAGTTACCCGCTGGCGCGACGCAAGAGCGGACGCAAAAAGTGTTGGATCAAGTTACGGATTACTATCTGAAGAACGAGAAAGCGAACGTTGAAAGTGTCTTTACGGTTAACGGCTTTAGCTTCAGCGGCCAGGCACAAAACGCCGGTATGGCCTTCGTCAGTCTGAAACCGTGGGAAGAGCGTAATGGTGACGAAAACAGTGCGGAAGCGGTAATCCATCGTGCCAAAATGGAATTGGGCAAGATCCGCGACGGTTTTGTCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCGCGCAGTTTAAACTGGAAGTTGACCAGGAAAAGGCGCAGGCATTAGGTGTTTCACTTTCTGACATCAATCAGACCATTTCAACGGCGCTGGGTGGGACTTACGTTAACGACTTCATCGACCGTGGCCGCGTGAAAAAGTTGTATGTTCAGGCGGATGCCAAATTCCGTATGCTGCCAGAAGATGTCGATAAACTTTATGTCCGCAGCGCCAACGGCGAAATGGTGCCATTCTCGGCCTTTACCACTTCACATTGGGTGTATGGCTCTCCGCGACTGGAACGCTACAACGGTCTGCCGTCAATGGAGATTCAGGGGGAAGCCGCGCCAGGAACCAGTTCCGGCGATGCCATGGCGTTGATGGAAAACCTTGCGTCAAAATTACCTGCGGGCATTGGTTATGACTGGACGGGTATGTCGTATCAGGAACGCTTATCGGGAAACCAGGCTCCCGCTCTGGTAGCAATTTCCTTTGTGGTTGTTTTCCTGTGCCTTGCTGCACTCTATGAAAGCTGGTCAATTCCTGTCTCGGTTATGTTGGTAGTGCCGTTAGGGATTGTCGGCGTGCTGCTGGCGGCGACACTCTTTAATCAAAAAAATGACGTCTACTTTATGGTGGGCTTGCTAACGACAATTGGCTTGTCGGCCAAAAACGCTATTTTGATCGTTGAGTTCGCTAAAGATCTCATGGAGAAAGAGGGTAAAGGTGTTGTTGAAGCGACACTGATGGCAGTACGTATGCGTCTGCGTCCTATCCTGATGACCTCTCTCGCCTTTATTCTCGGCGTATTACCGCTAGCTATCAGTAACGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAA", + "dna_sequence_length": 3105, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_3211", + "location": [ + [ + "NC_000913", + 3415033, + "+", + 3105 + ] + ], + "md5": "5d629896f78627284f4fd8383e5eed78", + "parent_gene": "", + "protein_md5": "f5fa0d339f2f184eefd443a5e880232a", + "protein_translation": "MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRFKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKLYVQADAKFRMLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRRCFKG", + "protein_translation_length": 1034, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010728" + ], + [ + "gene_synonym", + "ECK3254" + ], + [ + "gene_synonym", + "EcoGene:EG12833" + ], + [ + "gene_synonym", + "GI:16131155" + ], + [ + "gene_synonym", + "GeneID:947767" + ], + [ + "gene_synonym", + "JW3235" + ], + [ + "gene_synonym", + "NP_417733.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64622" + ], + [ + "gene_synonym", + "b3267" + ], + [ + "gene_synonym", + "yhdV" + ] + ], + "dna_sequence": "ATGAAAAGATTAATTCCTGTGGCATTGCTCACCGCATTGCTGGCGGGCTGTGCTCACGATTCGCCCTGCGTTCCGGTTTATGACGATCAGGGTCGTCTGGTTCACACCAATACCTGTATGAAAGGCACGACTCAGGATAACTGGGAAACGGCTGGGGCTATTGCCGGCGGGGCAGCTGCTGTTGCTGGCCTGACGATGGGGATCATCGCTCTATCGAAATAA", + "dna_sequence_length": 222, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_3212", + "location": [ + [ + "NC_000913", + 3418390, + "+", + 222 + ] + ], + "md5": "c6894cafa9068f849b58b01a946840a4", + "parent_gene": "", + "protein_md5": "8a1c0a537e4d96325b599a8f31971dc6", + "protein_translation": "MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010731" + ], + [ + "gene_synonym", + "ECK3255" + ], + [ + "gene_synonym", + "EcoGene:EG12834" + ], + [ + "gene_synonym", + "GeneID:947766" + ], + [ + "gene_synonym", + "JW3236" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45766" + ], + [ + "gene_synonym", + "b3268" + ], + [ + "gene_synonym", + "yhdW" + ] + ], + "dna_sequence": "ATGAAAAAGATGATGATAGCCACACTGGCTGCCGCCAGCGTGCTGCTTGCCGTTGCAAATCAGGCGGCTGCTGGCGCGACGCTTGATGCCGTTCAGAAAAAAGGTTTTGTGCAATGCGGGATCAGTGATGGATTACCTGGGTTCTCTTATGCCGATGCTGACGGTAAGTTTTCAGGTATTGATGTTGATATTTGTCGTGGTGTTGCCGCTGCTGTATTTGGTGACGACACGAAAGTGAAATATACCCCGCTCACTGCAAAAGAACGCTTCACCGCTTTACAGTCAGGGGAGGTGGATTTGCTCTCCCGTAATACGACCTGGACTTCATCTCGCGATGCCGGGATGGGAATGGCATTTACCGGCGTCACTTATTACGACGGCATTGGCTTCCTGACGCACGATAAAGCGGGGCTAAAAAGCGCGAAAGAACTGGATGGCGCTACCGTCTGTATTCAGGCGGGTACTGATACCGAACTCAACGTCGCCGACTACTTCAAGGCAAACAATATGAAGTACACACCGGTGACTTTCGATCGCTCTGACGAATCAGCGAAGGCACTGGAATCTGGTCGCTGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAA", + "dna_sequence_length": 1026, + "id": "CDS_3213", + "location": [ + [ + "NC_000913", + 3419042, + "+", + 66 + ], + [ + "NC_000913", + 3419107, + "+", + 960 + ] + ], + "md5": "7d641a9d0fe4360ee224f5968090587a", + "parent_gene": "", + "protein_md5": "3417c2ed076970fa0b84ae9d3b83cb68", + "protein_translation": "MKKMMIATLAAASVLLAVANQAAAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010733" + ], + [ + "gene_synonym", + "ECK3256" + ], + [ + "gene_synonym", + "EcoGene:EG12835" + ], + [ + "gene_synonym", + "GI:49176333" + ], + [ + "gene_synonym", + "GeneID:947765" + ], + [ + "gene_synonym", + "JW5544" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45767" + ], + [ + "gene_synonym", + "YP_026209.1" + ], + [ + "gene_synonym", + "b3269" + ], + [ + "gene_synonym", + "yhdX" + ] + ], + "dna_sequence": "ATGTCTCATCGCCGCTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGTTCGCGCCTGGTTATTCCAGATCCTTGCCGTTGTTGCTGTTGTCGGCATTGTTGGTTGGTTATTTCACAACACTGTAACGAATCTCAATAATCGTGGCATTACTTCAGGTTTTGCCTTTCTGGATCGCGGCGCTGGCTTCGGTATTGTCCAGCATTTGATCGATTACCAGCAGGGCGACACCTACGGACGCGTTTTTATTGTCGGCTTACTCAATACGCTACTGGTTTCTGCATTGTGTATTGTGTTCGCTTCTGTTTTGGGCTTCTTTATCGGTCTGGCGAGACTTTCGGATAACTGGCTGCTACGAAAGCTTTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTGGGAGACGGATTTATTGCGTTTATCCTGGCTGTTGTTATGGCTATAGTCCTTTCTGTTGGGCTATTCCGCTTTAATAAAACATACCAGATAAAGACCGGACAACTGCGCCGCACCTGGCCGATCGCCGCAGTGTTGATCATTGGTTTGCCTTTACTGGCGCAATGGCTTTTTGGCGCAGCACTACACTGGGATGTCCCAGCCCTACGAGGCTTTAACTTCCGCGGCGGGATGGTTTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCGGGTGATTATTCCACCGTTAACCAGCCAGTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATCGCGATCGTTGAACGCTAA", + "dna_sequence_length": 1182, + "functions": [ + "putative amino acid ABC transporter permease" + ], + "id": "CDS_3214", + "location": [ + [ + "NC_000913", + 3420134, + "+", + 1182 + ] + ], + "md5": "5cfa1d7eace7b8b3a3ab09428c010c3b", + "parent_gene": "", + "protein_md5": "d5fcfc167d949c2649ded980735916c2", + "protein_translation": "MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010736" + ], + [ + "gene_synonym", + "ECK3257" + ], + [ + "gene_synonym", + "EcoGene:EG12836" + ], + [ + "gene_synonym", + "GI:90111567" + ], + [ + "gene_synonym", + "GeneID:947764" + ], + [ + "gene_synonym", + "JW5545" + ], + [ + "gene_synonym", + "NP_417736.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45768" + ], + [ + "gene_synonym", + "b3270" + ], + [ + "gene_synonym", + "yhdY" + ] + ], + "dna_sequence": "ATGACAAAAGTATTGCTGTCTCATCCCCCGCGCCCGGCGAGCCATAACTCAAGCCGCGCGATGGTGTGGGTGCGAAAAAATCTGTTCTCCAGCTGGAGCAATAGCCTGCTGACTATTGGCTGCATATGGTTGATGTGGGAACTGATCCCACCGTTGCTGAACTGGGCATTTTTGCAGGCTAACTGGGTTGGCTCAACGCGTGCCGACTGCACAAAAGCCGGTGCCTGTTGGGTCTTCATCCACGAACGATTTGGTCAGTTTATGTATGGGCTTTACCCACACGACCAACGCTGGCGAATTAACCTCGCATTACTGATTGGGCTTGTGTCGATCGCACCAATGTTCTGGAAAATACTCCCGCATCGCGGTCGCTATATTGCGGCCTGGGCGGTGATTTACCCACTGATTGTCTGGTGGCTGATGTATGGCGGTTTTTTTGCTCTTGAGCGGGTTGAAACCCGGCAATGGGGCGGGCTGACGCTAACTTTAATTATTGCATCAGTTGGGATTGCGGGGGCGCTACCGTGGGGGATCTTACTGGCGTTAGGTCGCCGCTCCCATATGCCGATTGTGCGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCACAGGCGTTGAAGCTGGTAATTCCTGGGCTGGTAAATACCATCATCGCACTCTTCAAAGATACCAGCCTGGTGATCATTATCGGGTTGTTCGATCTTTTCAGTAGCGTTCAGCAGGCAACCGTTGATCCCGCCTGGTTGGGTATGTCGACGGAAGGGTATGTTTTCGCCGCGCTGATCTACTGGATCTTCTGTTTCAGCATGTCGCGCTATAGCCAGTATCTGGAAAAACGTTTTAACACCGGGCGTACACCGCATTGA", + "dna_sequence_length": 1104, + "functions": [ + "putative amino acid ABC transporter permease" + ], + "id": "CDS_3215", + "location": [ + [ + "NC_000913", + 3421325, + "+", + 1104 + ] + ], + "md5": "e9e75744dd18091bdd7914b968442a1c", + "parent_gene": "", + "protein_md5": "de5bdeed68994facad6ccc8ba26eacd1", + "protein_translation": "MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010738" + ], + [ + "gene_synonym", + "ECK3258" + ], + [ + "gene_synonym", + "EcoGene:EG12837" + ], + [ + "gene_synonym", + "GI:16131159" + ], + [ + "gene_synonym", + "GeneID:947763" + ], + [ + "gene_synonym", + "JW3239" + ], + [ + "gene_synonym", + "NP_417737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45769" + ], + [ + "gene_synonym", + "b3271" + ], + [ + "gene_synonym", + "yhdZ" + ] + ], + "dna_sequence": "ATGAGCCAAATTTTACTGCAACCTGCTAACGCGATGATTACGCTGGAAAACGTCAATAAATGGTATGGACAATTCCATGTTTTGAAAAATATAAATTTAACCGTGCAACCGGGAGAACGGATCGTTCTGTGTGGCCCTTCAGGTTCCGGTAAATCGACAACCATTCGTTGTATTAATCATCTGGAAGAACATCAACAGGGACGGATCGTGGTAGATGGCATCGAACTTAATGAAGATATCCGCAATATTGAGCGCGTCAGGCAGGAAGTGGGAATGGTCTTTCAGCATTTCAATCTCTTCCCTCATCTGACCGTTTTACAGAACTGTACCCTGGCACCGATTTGGGTACGCAAGATGCCTAAGAAAGAGGCTGAAGATCTGGCGGTGCATTACCTAGAGCGGGTGAGAATTGCCGAACATGCGCATAAGTTTCCCGGACAGATTTCAGGTGGTCAGCAGCAACGCGTTGCCATTGCGCGTTCGCTGTGTATGAAGCCGAAAATTATGTTGTTTGATGAGCCAACGTCGGCGCTCGATCCTGAGATGGTGAAAGAGGTGCTGGATACGATGATTGGGCTGGCGCAGTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAA", + "dna_sequence_length": 759, + "functions": [ + "putative amino acid ABC transporter ATPase" + ], + "id": "CDS_3216", + "location": [ + [ + "NC_000913", + 3422436, + "+", + 759 + ] + ], + "md5": "f47e7134a5a96e1e30a44aa1e2d0db98", + "parent_gene": "", + "protein_md5": "ad63e3236acfbfa00af77ac3b4b38c45", + "protein_translation": "MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRAFLSQVIH", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010759" + ], + [ + "gene_synonym", + "ECK3266" + ], + [ + "gene_synonym", + "EcoGene:EG12838" + ], + [ + "gene_synonym", + "GI:90111568" + ], + [ + "gene_synonym", + "GeneID:947775" + ], + [ + "gene_synonym", + "JW5710" + ], + [ + "gene_synonym", + "NP_417738.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9W9" + ], + [ + "gene_synonym", + "b3279" + ], + [ + "gene_synonym", + "yrdA" + ] + ], + "dna_sequence": "ATGTCTGATGTTTTACGCCCATACCGCGATCTTTTTCCACAAATCGGTCAGCGCGTAATGATCGACGATAGCAGTGTCGTGATTGGTGACGTTCGTCTGGCTGATGATGTGGGGATCTGGCCGCTCGTTGTGATTCGTGGAGATGTACATTATGTACAGATCGGAGCACGCACCAATATCCAGGATGGCAGTATGTTGCATGTCACTCATAAATCCTCGTACAACCCAGATGGCAACCCATTAACCATTGGCGAAGATGTCACTGTTGGTCACAAGGTGATGCTCCACGGCTGCACCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTTACGCTATTCCGCGAATAATTACGTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGA", + "dna_sequence_length": 555, + "functions": [ + "bacterial transferase hexapeptide domain protein" + ], + "id": "CDS_3217", + "location": [ + [ + "NC_000913", + 3429236, + "+", + 555 + ] + ], + "md5": "208214c58b3ce26d2c2df7902a589d2a", + "parent_gene": "", + "protein_md5": "7a67a861e23485adf7cdf01e617b1dfa", + "protein_translation": "MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010761" + ], + [ + "gene_synonym", + "ECK3267" + ], + [ + "gene_synonym", + "EcoGene:EG12839" + ], + [ + "gene_synonym", + "GI:16131161" + ], + [ + "gene_synonym", + "GeneID:947774" + ], + [ + "gene_synonym", + "JW3241" + ], + [ + "gene_synonym", + "NP_417739.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45795" + ], + [ + "gene_synonym", + "b3280" + ], + [ + "gene_synonym", + "yrdB" + ] + ], + "dna_sequence": "GTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGAAGAAGAAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGA", + "dna_sequence_length": 258, + "functions": [ + "DUF1488 family protein" + ], + "id": "CDS_3218", + "location": [ + [ + "NC_000913", + 3430023, + "-", + 258 + ] + ], + "md5": "c040cb381e3e4d15876616a6c7db9bf8", + "parent_gene": "", + "protein_md5": "a4cace8ccd1970b7fd2f6065f3c8780b", + "protein_translation": "MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010763" + ], + [ + "gene_synonym", + "ECK3268" + ], + [ + "gene_synonym", + "EcoGene:EG10077" + ], + [ + "gene_synonym", + "GI:16131162" + ], + [ + "gene_synonym", + "GeneID:947776" + ], + [ + "gene_synonym", + "JW3242" + ], + [ + "gene_synonym", + "NP_417740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15770" + ], + [ + "gene_synonym", + "aroE" + ], + [ + "gene_synonym", + "b3281" + ] + ], + "dna_sequence": "ATGGAAACCTATGCTGTTTTTGGTAATCCGATAGCCCACAGCAAATCGCCATTCATTCATCAGCAATTTGCTCAGCAACTGAATATTGAACATCCCTATGGGCGCGTGTTGGCACCCATCAATGATTTCATCAACACACTGAACGCTTTCTTTAGTGCTGGTGGTAAAGGTGCGAATGTGACGGTGCCTTTTAAAGAAGAGGCTTTTGCCAGAGCGGATGAGCTTACTGAACGGGCAGCGTTGGCTGGTGCTGTTAATACCCTCATGCGGTTAGAAGATGGACGCCTGCTGGGTGACAATACCGATGGTGTAGGCTTGTTAAGCGATCTGGAACGTCTGTCTTTTATCCGCCCTGGTTTACGTATTCTGCTTATCGGCGCTGGTGGAGCATCTCGCGGCGTACTACTGCCACTCCTTTCCCTGGACTGTGCGGTGACAATAACTAATCGGACGGTATCCCGCGCGGAAGAGTTGGCTAAATTGTTTGCGCACACTGGCAGTATTCAGGCGTTGAGTATGGACGAACTGGAAGGTCATGAGTTTGATCTCATTATTAATGCAACATCCAGTGGCATCAGTGGTGATATTCCGGCGATCCCGTCATCGCTCATTCATCCAGGCATTTATTGCTATGACATGTTCTATCAGAAAGGAAAAACTCCTTTTCTGGCATGGTGTGAGCAGCGAGGCTCAAAGCGTAATGCTGATGGTTTAGGAATGCTGGTGGCACAGGCGGCTCATGCCTTTCTTCTCTGGCACGGTGTTCTGCCTGACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGA", + "dna_sequence_length": 819, + "functions": [ + "dehydroshikimate reductase, NAD(P)-binding" + ], + "id": "CDS_3219", + "location": [ + [ + "NC_000913", + 3430838, + "-", + 819 + ] + ], + "md5": "53ff7256441cb875571b9663be9dc74d", + "parent_gene": "", + "protein_md5": "21789729ea9a46ac1229042bf1736709", + "protein_translation": "METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010766" + ], + [ + "gene_synonym", + "ECK3269" + ], + [ + "gene_synonym", + "EcoGene:EG12840" + ], + [ + "gene_synonym", + "GI:16131163" + ], + [ + "gene_synonym", + "GeneID:947783" + ], + [ + "gene_synonym", + "JW3243" + ], + [ + "gene_synonym", + "NP_417741.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45748" + ], + [ + "gene_synonym", + "b3282" + ], + [ + "gene_synonym", + "rimN" + ], + [ + "gene_synonym", + "tsaC" + ], + [ + "gene_synonym", + "yrdC" + ] + ], + "dna_sequence": "GTGAATAATAACCTGCAAAGAGACGCTATCGCAGCTGCGATAGATGTTCTCAATGAAGAACGTGTCATCGCCTATCCAACGGAAGCCGTTTTCGGTGTTGGGTGCGATCCTGATAGCGAAACAGCAGTGATGCGACTGTTGGAGTTAAAACAGCGTCCGGTTGATAAGGGGCTGATTTTAATCGCAGCAAATTACGAGCAGCTTAAACCCTATATTGATGACACCATGTTGACTGACGTGCAGCGTGAAACCATTTTTTCCCGCTGGCCAGGTCCTGTCACCTTTGTCTTTCCCGCGCCTGCGACAACACCGCGCTGGTTGACGGGCCGCTTTGATTCGCTTGCTGTACGAGTCACCGACCATCCGTTGGTGGTTGCTTTGTGCCAGGCTTATGGTAAACCGCTGGTTTCTACCAGTGCCAACTTGAGTGGATTGCCACCTTGTCGAACAGTAGACGAAGTTCGCGCACAATTTGGCGCGGCGTTCCCGGTTGTGCCTGGTGAAACGGGGGGGCGTTTAAATCCTTCAGAAATCCGCGATGCCCTGACGGGTGAACTGTTTCGACAGGGGTAA", + "dna_sequence_length": 573, + "functions": [ + "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase" + ], + "id": "CDS_3220", + "location": [ + [ + "NC_000913", + 3431415, + "-", + 573 + ] + ], + "md5": "5ceb6f3f05c11bba06dad03c0acbb288", + "parent_gene": "", + "protein_md5": "c77abacf02d2fb3134205727daa19224", + "protein_translation": "MNNNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRDALTGELFRQG", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010768" + ], + [ + "gene_synonym", + "ECK3270" + ], + [ + "gene_synonym", + "EcoGene:EG12841" + ], + [ + "gene_synonym", + "GI:49176335" + ], + [ + "gene_synonym", + "GeneID:947782" + ], + [ + "gene_synonym", + "JW5949" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45771" + ], + [ + "gene_synonym", + "YP_026210.1" + ], + [ + "gene_synonym", + "b3283" + ], + [ + "gene_synonym", + "yrdD" + ] + ], + "dna_sequence": "ATGGCGAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGTGCGGGGCTGAACTGGTTATTCGATCCGGGAAACACGGTCCGTTTCTTGGATGCTCACAGTATCCGGCGTGTGACTACGTCCGTCCTCTGAAATCTTCAGCGGATGGACATATCGTCAAAGTTCTGGAGGGGCAGGTTTGCCCTGCATGTGGCGCAAATCTGGTATTACGCCAGGGACGCTTTGGTATGTTTATTGGTTGCATTAACTACCCTGAATGCGAACATACCGAACTTATCGATAAACCGGACGAAACAGCAATTACATGCCCCCAATGTCGGACGGGCCATCTGGTCCAGCGCCGCTCCCGTTATGGCAAAACATTTCACTCTTGTGATCGCTACCCGGAGTGTCAATTTGCCATTAACTTCAAACCCATAGCTGGAGAATGCCCTGAGTGTCATTATCCGCTACTCATCGAAAAGAAAACCGCGCAGGGTGTAAAACACTTTTGTGCCAGTAAACAATGTGGAAAGCCGGTTTCGGCGGAATAA", + "dna_sequence_length": 543, + "functions": [ + "ssDNA-binding protein, function unknown" + ], + "id": "CDS_3221", + "location": [ + [ + "NC_000913", + 3431962, + "-", + 543 + ] + ], + "md5": "9e6cb955daf74403dd49d8337cfc912c", + "parent_gene": "", + "protein_md5": "061f2c854f71fb2933858f32bac9bd55", + "protein_translation": "MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDETAITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010770" + ], + [ + "gene_synonym", + "ECK3271" + ], + [ + "gene_synonym", + "EcoGene:EG11605" + ], + [ + "gene_synonym", + "GI:16131165" + ], + [ + "gene_synonym", + "GeneID:947781" + ], + [ + "gene_synonym", + "JW3245" + ], + [ + "gene_synonym", + "NP_417743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A828" + ], + [ + "gene_synonym", + "b3284" + ], + [ + "gene_synonym", + "smg" + ] + ], + "dna_sequence": "ATGTTCGACGTACTAATGTATTTGTTTGAAACCTATATTCACACAGAAGCTGAGTTGCGTGTGGATCAAGACAAACTTGAACAGGATCTTACCGACGCAGGTTTTGAGCGAGAAGATATCTACAATGCCCTGCTATGGCTGGAAAAACTTGCTGATTATCAGGAAGGGTTGGCAGAACCGATGCAACTGGCCTCGGATCCTCTCTCCATGCGTATTTATACACCGGAAGAGTGTGAACGACTGGATGCCAGCTGCCGTGGGTTTCTGCTTTTCCTTGAGCAGATTCAGGTGCTCAACCTTGAAACTCGTGAAATGGTGATAGAGCGAGTGCTCGCGCTGGATAACGCAGAGTTCGAACTGGATGATCTGAAATGGGTGATCCTGATGGTGTTGTTCAATATTCCGGGCTGCGAAAATGCGTACCAGCAAATGGAAGAATTACTCTTTGAAGTGAATGAAGGTATGCTGCATTAA", + "dna_sequence_length": 474, + "functions": [ + "DUF494 family putative periplasmic protein" + ], + "id": "CDS_3222", + "location": [ + [ + "NC_000913", + 3432464, + "-", + 474 + ] + ], + "md5": "3ef7b1d6e7c36e0f98f9e693553b699b", + "parent_gene": "", + "protein_md5": "b04c6c392fe494e9a01eddae341e7995", + "protein_translation": "MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174103" + ], + [ + "gene_synonym", + "ECK3272" + ], + [ + "gene_synonym", + "EcoGene:EG11604" + ], + [ + "gene_synonym", + "GI:49176336" + ], + [ + "gene_synonym", + "GeneID:2847708" + ], + [ + "gene_synonym", + "JW5708" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30852" + ], + [ + "gene_synonym", + "YP_026211.1" + ], + [ + "gene_synonym", + "b4473" + ], + [ + "gene_synonym", + "smf" + ] + ], + "dna_sequence": "ATGGTCGATACAGAAATTTGGCTGCGTTTAATGAGTATCAGCAGCTTGTACGGCGATGATATGGTCCGTATCGCTCACTGGGTGGCAAAACAGTCGCATATTGATGCGGTTGTATTGCAGCAAACAGGGCTTACATTGCGGCAGGCACAACGCTTTCTTTCATTTCCACGAAAGAGTATCGAAAGCTCACTTTGTTGGTTGGAGCAACCCAACCATCATTTAATTCCTGCGGACAGCGAATTTTATCCTCCTCAACTTCTGGCGACGACAGATTACCCCGGCGCACTGTTTGTTGAAGGAGAACTGCACGCGCTGCATTCATTTCAGCTTGCCGTAGTGGGGAGTCGGGCGCATTCATGGTATGGCGAGCGATGGGGACGATTATTTTGCGAAACTCTGGCGACGCGTGGAGTGACAATTACGAGTGGACTGGCGCGTGGAATCGATGGTGTAGCGCATAAAGCAGCCTTACAGGTAAATGGCGTCAGCATTGCTGTATTGGGGAATGGACTTAATACCATTCATCCCCGCCGTCATGCCCGACTGGCTGCCAGTCTGCTTGAACAGGGGGGCGCTCTCGTCTCGGAATTTCCCCTCGATGTTCCACCCCTTGCTTACAATTTCCCACGAAGAAATCGCATTATCAGTGGTCTAAGTAAAGGTGTACTGGTGGTGGAAGCGGCTTTGCGTAGTGGTTCGCTGGTGACAGCACGTTGTGCGCTTGAGCAGGGGCGAGAAGTTTTTGCCTTGCCAGGTCCAATAGGGAATCCGGGAAGCGAAGGGCCTCACTGGTTAATAAAACAAGGTGCGATTCTTGTGACGGAACCGGAAGAAATTCTGGAAAACTTGCAATTTGGATTGCACTGGTTGCCAGACGCCCCTGAAAATTCATTTTATTCACCAGATCAGCAAGACGTGGCATTGCCATTTCCTGAGCTCCTGGCTAACGTAGGAGATGAGGTAACACCTGTTGACGTCGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTGAGGAGGGCATGCCATGTTCGACGTACTAATGTATTTGTTTGA", + "dna_sequence_length": 1125, + "functions": [ + "DNA recombination-mediator A family protein" + ], + "id": "CDS_3223", + "location": [ + [ + "NC_000913", + 3433560, + "-", + 1125 + ] + ], + "md5": "2a637c030923146d5d39c29742c7877f", + "parent_gene": "", + "protein_md5": "f0b6512bf4269ac381617b10726fec38", + "protein_translation": "MVDTEIWLRLMSISSLYGDDMVRIAHWVAKQSHIDAVVLQQTGLTLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV", + "protein_translation_length": 374, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010779" + ], + [ + "gene_synonym", + "ECK3273" + ], + [ + "gene_synonym", + "EcoGene:EG11440" + ], + [ + "gene_synonym", + "GI:16131166" + ], + [ + "gene_synonym", + "GeneID:947780" + ], + [ + "gene_synonym", + "JW3248" + ], + [ + "gene_synonym", + "NP_417745.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6K3" + ], + [ + "gene_synonym", + "b3287" + ], + [ + "gene_synonym", + "def" + ], + [ + "gene_synonym", + "fms" + ] + ], + "dna_sequence": "ATGTCAGTTTTGCAAGTGTTACATATTCCGGACGAGCGGCTTCGCAAAGTTGCTAAACCGGTAGAAGAAGTGAATGCAGAAATTCAGCGTATCGTCGATGATATGTTCGAGACGATGTACGCAGAAGAAGGTATTGGCCTGGCGGCAACCCAGGTTGATATCCATCAACGTATCATTGTTATTGATGTTTCGGAAAACCGTGACGAACGGCTAGTGTTAATCAATCCAGAGCTTTTAGAAAAAAGCGGCGAAACAGGCATTGAAGAAGGTTGCCTGTCGATCCCTGAACAACGTGCTTTAGTGCCGCGCGCAGAGAAAGTTAAAATTCGCGCCCTTGACCGCGACGGTAAACCATTTGAACTGGAAGCAGACGGTCTGTTAGCCATCTGTATTCAGCATGAGATGGATCACCTGGTCGGCAAACTGTTTATGGATTATCTGTCACCGCTGAAACAACAACGTATTCGTCAGAAAGTTGAAAAACTGGATCGTCTGAAAGCCCGGGCTTAA", + "dna_sequence_length": 510, + "functions": [ + "peptide deformylase" + ], + "id": "CDS_3224", + "location": [ + [ + "NC_000913", + 3433690, + "+", + 510 + ] + ], + "md5": "cd0f41c439f42713866e18f9c364a00c", + "parent_gene": "", + "protein_md5": "6edaccfd0cf997a74924ac8da9f6b01f", + "protein_translation": "MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010781" + ], + [ + "gene_synonym", + "ECK3274" + ], + [ + "gene_synonym", + "EcoGene:EG11268" + ], + [ + "gene_synonym", + "GI:16131167" + ], + [ + "gene_synonym", + "GeneID:947779" + ], + [ + "gene_synonym", + "JW3249" + ], + [ + "gene_synonym", + "NP_417746.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23882" + ], + [ + "gene_synonym", + "b3288" + ], + [ + "gene_synonym", + "fmt" + ], + [ + "gene_synonym", + "yhdD" + ] + ], + "dna_sequence": "GTGTCAGAATCACTACGTATTATTTTTGCGGGTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTCTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAGTGCTGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCGGTGCTGCACCAATCCAACGCTCACTATGGGCGGGTGATGCAGAAACTGGTGTGACCATTATGCAAATGGATGTCGGTTTAGACACCGGTGATATGCTCTATAAGCTCTCCTGCCCGATTACTGCAGAAGATACCAGTGGTACGCTGTACGACAAGCTGGCAGAGCTTGGCCCACAAGGGCTTATCACCACGTTGAAACAACTGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCTGGAAATTGAAGGACAGCCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACAAACAAGGCATTCAGGTTGCGACTGGTGATGGCATCCTGAACCTGCTCTCGTTACAACCTGCGGGTAAGAAAGCGATGAGCGCGCAAGACCTCCTGAACTCTCGTCGGGAATGGTTTGTTCCGGGCAACCGTCTGGTCTGA", + "dna_sequence_length": 948, + "functions": [ + "10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase" + ], + "id": "CDS_3225", + "location": [ + [ + "NC_000913", + 3434214, + "+", + 948 + ] + ], + "md5": "f40d306846d2428880566f87627108f2", + "parent_gene": "", + "protein_md5": "9e9ed0b171c702bc32b87b9fa84028bb", + "protein_translation": "MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010785" + ], + [ + "gene_synonym", + "ECK3275" + ], + [ + "gene_synonym", + "EcoGene:EG12163" + ], + [ + "gene_synonym", + "GI:16131168" + ], + [ + "gene_synonym", + "GeneID:947789" + ], + [ + "gene_synonym", + "JW3250" + ], + [ + "gene_synonym", + "NP_417747.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36929" + ], + [ + "gene_synonym", + "b3289" + ], + [ + "gene_synonym", + "fmu" + ], + [ + "gene_synonym", + "fmv" + ], + [ + "gene_synonym", + "rrmB" + ], + [ + "gene_synonym", + "rsmB" + ], + [ + "gene_synonym", + "sun" + ], + [ + "gene_synonym", + "yhdB" + ] + ], + "dna_sequence": "ATGAAAAAACAACGTAATTTACGTAGCATGGCGGCCCAGGCCGTTGAACAAGTCGTCGAGCAAGGGCAATCATTAAGCAACATTCTGCCACCGCTCCAGCAAAAAGTTTCCGATAAAGACAAAGCACTTCTTCAAGAGTTGTGCTTTGGCGTACTGCGTACGCTTTCGCAGTTAGACTGGCTGATTAATAAGTTAATGGCCCGTCCGATGACCGGCAAACAGCGGACCGTGCATTACCTGATTATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGTCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGATGCACGTTATCTGCATCCTTCCTGGTTGCTGAAGCGTCTGCAAAAAGCGTATCCAGAGCAGTGGCAATCCATCGTCGAAGCCAATAACCAGCGTCCGCCAATGTGGCTGCGTATTAATCGTACGCATCATTCCCGCGACAGCTGGCTTGCATTGCTGGATGAAGCAGGAATGAAAGGTTTCCCGCATGCGGATTACCCTGATGCTGTACGTCTGGAAACACCTGCACCTGTTCATGCGCTACCTGGTTTTGAAGACGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCAGAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCAACAGTTTGATCGCATTTTATTAGATGCGCCTTGTTCAGCAACCGGTGTGATTCGTCGCCATCCAGATATTAAATGGTTACGTCGCGATCGCGATATCCCGGAACTCGCGCAATTGCAGTCTGAAATTCTCGACGCCATTTGGCCGCATTTAAAAACCGGTGGAACTCTGGTCTATGCCACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGA", + "dna_sequence_length": 1290, + "functions": [ + "16S rRNA m(5)C967 methyltransferase, SAM-dependent" + ], + "id": "CDS_3226", + "location": [ + [ + "NC_000913", + 3435207, + "+", + 1290 + ] + ], + "md5": "0f1f6349f491daf18b60234d56f08eb5", + "parent_gene": "", + "protein_md5": "8b7a837eef5a8ef62c5f207f8acd54c0", + "protein_translation": "MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010787" + ], + [ + "gene_synonym", + "ECK3276" + ], + [ + "gene_synonym", + "EcoGene:EG11019" + ], + [ + "gene_synonym", + "GI:16131169" + ], + [ + "gene_synonym", + "GeneID:947788" + ], + [ + "gene_synonym", + "JW3251" + ], + [ + "gene_synonym", + "NP_417748.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI8" + ], + [ + "gene_synonym", + "b3290" + ], + [ + "gene_synonym", + "sapG" + ], + [ + "gene_synonym", + "trkA" + ] + ], + "dna_sequence": "ATGAAAATTATCATTCTGGGTGCCGGCCAGGTTGGCGGCACACTGGCGGAAAACCTGGTTGGCGAGAACAACGATATTACTGTTGTCGATACCAACGGTGAGCGTCTGCGGACCTTACAGGATAAATTTGACCTGCGGGTCGTGCAGGGGCATGGCTCTCATCCACGCGTATTGCGGGAGGCAGGTGCCGACGACGCCGATATGCTGGTTGCTGTAACCAGTTCAGATGAAACCAATATGGTTGCCTGCCAGGTAGCCTACTCACTTTTCAACACCCCTAATCGCATCGCTCGTATCCGCTCACCAGACTACGTGCGCGATGCCGATAAGCTATTTCATTCAGATGCTGTGCCGATTGATCATCTGATCGCACCAGAGCAGTTGGTTATCGATAATATTTACCGACTGATTGAGTATCCCGGCGCATTGCAGGTGGTGAACTTCGCTGAGGGTAAAGTCAGCCTGGCTGTGGTTAAAGCCTATTATGGCGGCCCGCTGATTGGTAATGCACTTTCGACCATGCGCGAACATATGCCACATATCGATACTCGTGTGGCAGCAATTTTCCGCCACGATCGCCCCATTCGTCCGCAAGGTTCGACCATTGTTGAAGCTGGTGATGAAGTGTTCTTTATTGCCGCTTCACAGCATATCCGCGCGGTGATGAGTGAATTACAGCGACTGGAAAAACCGTATAAGCGGATCATGCTGGTTGGTGGCGGTAATATCGGTGCAGGGCTGGCGCGTCGTCTGGAAAAAGATTACAGCGTTAAACTCATCGAACGTAATCAGCAGCGCGCTGCCGAACTGGCGGAAAAGTTACAGAATACGATCGTCTTTTTTGGTGATGCGTCGGATCAAGAACTACTGGCCGAAGAACATATCGATCAAGTTGATCTGTTTATTGCCGTCACCAACGATGACGAGGCCAATATCATGTCCGCCATGCTTGCCAAACGTATGGGTGCGAAAAAGGTGATGGTATTGATCCAGCGTCGCGCTTATGTGGATCTGGTTCAGGGGAGCGTTATCGATATTGCGATTTCACCACAACAAGCAACTATTTCTGCGTTGCTTAGCCATGTGCGAAAAGCAGATATTGTTGGTGTTTCCTCATTGCGCCGCGGCGTAGCAGAAGCTATTGAAGCCGTTGCTCACGGTGATGAAAGCACCTCACGCGTTGTCGGCAGAGTCATTGACGAAATCAAGCTACCGCCAGGAACGATTATTGGAGCGGTGGTACGTGGAAACGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAA", + "dna_sequence_length": 1377, + "functions": [ + "NAD-binding component of TrK potassium transporter" + ], + "id": "CDS_3227", + "location": [ + [ + "NC_000913", + 3436518, + "+", + 1377 + ] + ], + "md5": "0c2cfb19ced6ac85d0a07ecf105d8c80", + "parent_gene": "", + "protein_md5": "14ae9bf094d37bed1c647b85d7a70d2d", + "protein_translation": "MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFDLRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSPDYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQNTIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTSRVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERLFQPSPFFL", + "protein_translation_length": 458, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010790" + ], + [ + "gene_synonym", + "ECK3277" + ], + [ + "gene_synonym", + "EcoGene:EG11180" + ], + [ + "gene_synonym", + "GI:16131170" + ], + [ + "gene_synonym", + "GeneID:947787" + ], + [ + "gene_synonym", + "JW3252" + ], + [ + "gene_synonym", + "NP_417749.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A742" + ], + [ + "gene_synonym", + "b3291" + ], + [ + "gene_synonym", + "mscL" + ], + [ + "gene_synonym", + "stkA" + ], + [ + "gene_synonym", + "yhdC" + ] + ], + "dna_sequence": "ATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGCGCGGGAACGTGGTGGATTTGGCGGTGGGTGTCATTATCGGTGCGGCATTCGGGAAGATTGTCTCTTCACTGGTTGCCGATATCATCATGCCTCCTCTGGGCTTATTAATTGGCGGGATCGATTTTAAACAGTTTGCTGTCACGCTACGCGATGCGCAGGGGGATATCCCTGCTGTTGTGATGCATTACGGTGTCTTCATTCAAAACGTCTTTGATTTTCTGATTGTGGCCTTTGCCATCTTTATGGCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAA", + "dna_sequence_length": 411, + "functions": [ + "mechanosensitive channel protein, high conductance" + ], + "id": "CDS_3228", + "location": [ + [ + "NC_000913", + 3438024, + "+", + 411 + ] + ], + "md5": "f56713f4ec5032acd55d5177e0e3b3d4", + "parent_gene": "", + "protein_md5": "9a0b9a6c80c111b01765f49bf696bf99", + "protein_translation": "MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEVLLTEIRDLLKEQNNRS", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285071" + ], + [ + "gene_synonym", + "ECK3278" + ], + [ + "gene_synonym", + "EcoGene:EG11968" + ], + [ + "gene_synonym", + "GI:94541124" + ], + [ + "gene_synonym", + "GeneID:1450289" + ], + [ + "gene_synonym", + "JW3253" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36675" + ], + [ + "gene_synonym", + "YP_588467.1" + ], + [ + "gene_synonym", + "arfA" + ], + [ + "gene_synonym", + "b4550" + ], + [ + "gene_synonym", + "yhdL" + ] + ], + "dna_sequence": "ATGAGTCGATATCAGCATACTAAAGGGCAGATAAAGGATAATGCGATAGAAGCATTACTACATGATCCCTTATTCCGACAGCGCGTAGAGAAAAATAAGAAGGGGAAAGGCAGTTACATGCGAAAAGGAAAACATGGCAATCGGGGGAACTGGGAGGCCAGTGGCAAGAAAGTAAATCACTTTTTTACCACTGGTCTTCTGCTTTCAGGCGCTTGTTAA", + "dna_sequence_length": 219, + "functions": [ + "alternate ribosome-rescue factor A" + ], + "id": "CDS_3229", + "location": [ + [ + "NC_000913", + 3438649, + "-", + 219 + ] + ], + "md5": "e7e2af34c56ac8c9b7c39041247d65d4", + "parent_gene": "", + "protein_md5": "042540b999f41ce72ccf06399fb32492", + "protein_translation": "MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNHFFTTGLLLSGAC", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010793" + ], + [ + "gene_synonym", + "ECK3279" + ], + [ + "gene_synonym", + "EcoGene:EG11969" + ], + [ + "gene_synonym", + "GI:16131171" + ], + [ + "gene_synonym", + "GeneID:947786" + ], + [ + "gene_synonym", + "JW3254" + ], + [ + "gene_synonym", + "NP_417751.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS5" + ], + [ + "gene_synonym", + "b3292" + ], + [ + "gene_synonym", + "yhdM" + ], + [ + "gene_synonym", + "zntR" + ] + ], + "dna_sequence": "ATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAACAGCAGATGATGGAGCATGAAGTGCGTACTGAAGGTGGGTTTCGCCTATATACCGAAAGCGATCTCCAGCGATTGAAATTTATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAGCCGAGTTGCAGAGTATGCAGCGTTCCTTGCAACGCCTTAACGATGCCTGTTGTGGGACTGCTCATAGCAGTGTTTATTGTTCGATTCTTGAAGCTCTTGAACAAGGGGCGAGTGGCGTTAAGAGTGGTTGTTGA", + "dna_sequence_length": 426, + "functions": [ + "zntA gene transcriptional activator" + ], + "id": "CDS_3230", + "location": [ + [ + "NC_000913", + 3439130, + "-", + 426 + ] + ], + "md5": "a9fb85f8e2c444b6881329fcb303ab96", + "parent_gene": "", + "protein_md5": "e97ebe0750cea743d147d9f5f771bfc2", + "protein_translation": "MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010795" + ], + [ + "gene_synonym", + "ECK3280" + ], + [ + "gene_synonym", + "EcoGene:EG11970" + ], + [ + "gene_synonym", + "GI:16131172" + ], + [ + "gene_synonym", + "GeneID:947785" + ], + [ + "gene_synonym", + "JW3255" + ], + [ + "gene_synonym", + "NP_417752.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36677" + ], + [ + "gene_synonym", + "b3293" + ], + [ + "gene_synonym", + "yhdN" + ] + ], + "dna_sequence": "ATGTGGTTACTTGACCAGTGGGCAGAGCGCCATATAGCAGAAGCGCAAGCGAAAGGTGAGTTTGATAACCTGGCAGGTAGCGGCGAACCATTGATACTGGATGATGATTCTCACGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCCGGTTGCTTACCGCCAGAACTTGAGCAACGGAGAGAAGCAATTCAGCTTCTGGATATTCTCAAAGGTATCCGTCACGATGATCCGCAATATCAAGAGGTTAGCCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTTACGCGGCGATTATGCTGACAAGTTGTTGGACAAAATCAACGATAACTAG", + "dna_sequence_length": 369, + "functions": [ + "DUF1992 family protein" + ], + "id": "CDS_3231", + "location": [ + [ + "NC_000913", + 3439509, + "-", + 369 + ] + ], + "md5": "1949cd584003ff90ecdb9709ee058d90", + "parent_gene": "", + "protein_md5": "1d203ab277962fd871b609851310cbe3", + "protein_translation": "MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010799" + ], + [ + "gene_synonym", + "ECK3281" + ], + [ + "gene_synonym", + "EcoGene:EG10878" + ], + [ + "gene_synonym", + "GI:16131173" + ], + [ + "gene_synonym", + "GeneID:947784" + ], + [ + "gene_synonym", + "JW3256" + ], + [ + "gene_synonym", + "NP_417753.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG44" + ], + [ + "gene_synonym", + "b3294" + ], + [ + "gene_synonym", + "rplQ" + ] + ], + "dna_sequence": "ATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTACTCTTGCCAAGACTGATAGCGTTGCTAATCGTCGTCTGGCATTCGCCCGTACTCGTGATAACGAGATCGTGGCAAAACTGTTTAACGAACTGGGCCCGCGTTTCGCGAGCCGTGCCGGTGGTTACACTCGTATTCTGAAGTGTGGCTTCCGTGCAGGCGACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAA", + "dna_sequence_length": 384, + "functions": [ + "50S ribosomal subunit protein L17" + ], + "id": "CDS_3232", + "location": [ + [ + "NC_000913", + 3439999, + "-", + 384 + ] + ], + "md5": "a42316f7477db498de4703362f4333f9", + "parent_gene": "", + "protein_md5": "4363326f335edc2987d8e609b33aa633", + "protein_translation": "MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAAAE", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010802" + ], + [ + "gene_synonym", + "ECK3282" + ], + [ + "gene_synonym", + "EcoGene:EG10893" + ], + [ + "gene_synonym", + "GI:16131174" + ], + [ + "gene_synonym", + "GeneID:947794" + ], + [ + "gene_synonym", + "JW3257" + ], + [ + "gene_synonym", + "NP_417754.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Z4" + ], + [ + "gene_synonym", + "b3295" + ], + [ + "gene_synonym", + "pez" + ], + [ + "gene_synonym", + "phs" + ], + [ + "gene_synonym", + "rpoA" + ], + [ + "gene_synonym", + "sez" + ] + ], + "dna_sequence": "ATGCAGGGTTCTGTGACAGAGTTTCTAAAACCGCGCCTGGTTGATATCGAGCAAGTGAGTTCGACGCACGCCAAGGTGACCCTTGAGCCTTTAGAGCGTGGCTTTGGCCATACTCTGGGTAACGCACTGCGCCGTATTCTGCTCTCATCGATGCCGGGTTGCGCGGTGACCGAGGTTGAGATTGATGGTGTACTACATGAGTACAGCACCAAAGAAGGCGTTCAGGAAGATATCCTGGAAATCCTGCTCAACCTGAAAGGGCTGGCGGTGAGAGTTCAGGGCAAAGATGAAGTTATTCTTACCTTGAATAAATCTGGCATTGGCCCTGTGACTGCAGCCGATATCACCCACGACGGTGATGTCGAAATCGTCAAGCCGCAGCACGTGATCTGCCACCTGACCGATGAGAACGCGTCTATTAGCATGCGTATCAAAGTTCAGCGCGGTCGTGGTTATGTGCCGGCTTCTACCCGAATTCATTCGGAAGAAGATGAGCGCCCAATCGGCCGTCTGCTGGTCGACGCATGCTACAGCCCTGTGGAGCGTATTGCCTACAATGTTGAAGCAGCGCGTGTAGAACAGCGTACCGACCTGGACAAGCTGGTCATCGAAATGGAAACCAACGGCACAATCGATCCTGAAGAGGCGATTCGTCGTGCGGCAACCATTCTGGCTGAACAACTGGAAGCTTTCGTTGACTTACGTGATGTACGTCAGCCTGAAGTGAAAGAAGAGAAACCAGAGTTCGATCCGATCCTGCTGCGCCCTGTTGACGATCTGGAATTGACTGTCCGCTCTGCTAACTGCCTTAAAGCAGAAGCTATCCACTATATCGGTGATCTGGTACAGCGTACCGAGGTTGAGCTCCTTAAAACGCCTAACCTTGGTAAAAAATCTCTTACTGAGATTAAAGACGTGCTGGCTTCCCGTGGACTGTCTCTGGGCATGCGCCTGGAAAACTGGCCACCGGCAAGCATCGCTGACGAGTAA", + "dna_sequence_length": 990, + "functions": [ + "RNA polymerase, alpha subunit" + ], + "id": "CDS_3233", + "location": [ + [ + "NC_000913", + 3441029, + "-", + 990 + ] + ], + "md5": "ce65d17775a2dc5ba31635be921f2dc0", + "parent_gene": "", + "protein_md5": "456bfd9236c5cfd90803aed14a8ec2d0", + "protein_translation": "MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010805" + ], + [ + "gene_synonym", + "ECK3283" + ], + [ + "gene_synonym", + "EcoGene:EG10903" + ], + [ + "gene_synonym", + "GI:16131175" + ], + [ + "gene_synonym", + "GeneID:947793" + ], + [ + "gene_synonym", + "JW3258" + ], + [ + "gene_synonym", + "NP_417755.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7V8" + ], + [ + "gene_synonym", + "b3296" + ], + [ + "gene_synonym", + "ramA" + ], + [ + "gene_synonym", + "rpsD" + ], + [ + "gene_synonym", + "sud" + ] + ], + "dna_sequence": "ATGGCAAGATATTTGGGTCCTAAGCTCAAGCTGAGCCGTCGTGAGGGCACCGACTTATTCCTTAAGTCTGGCGTTCGCGCGATCGATACCAAGTGTAAAATTGAACAAGCTCCTGGCCAGCACGGTGCGCGTAAACCGCGTCTGTCTGACTATGGTGTGCAGTTGCGTGAAAAGCAAAAAGTTCGCCGTATCTATGGTGTGCTGGAGCGTCAGTTCCGTAACTACTACAAAGAAGCAGCACGTCTGAAAGGCAACACCGGTGAAAACCTGTTGGCTCTGCTGGAAGGTCGTCTGGACAACGTTGTATACCGTATGGGCTTCGGTGCCACTCGTGCAGAAGCACGTCAGCTGGTTAGCCATAAAGCAATTATGGTAAACGGTCGTGTTGTTAACATCGCTTCTTATCAGGTTAGTCCGAATGACGTTGTAAGCATTCGTGAGAAAGCGAAGAAGCAGTCTCGCGTGAAAGCCGCTCTGGAGCTGGCTGAGCAGCGTGAAAAGCCAACCTGGCTGGAAGTTGATGCTGGCAAGATGGAAGGTACGTTTAAGCGTAAGCCGGAGCGTTCTGATCTGTCTGCGGACATTAACGAACACCTGATCGTCGAGCTTTACTCCAAGTAA", + "dna_sequence_length": 621, + "functions": [ + "30S ribosomal subunit protein S4" + ], + "id": "CDS_3234", + "location": [ + [ + "NC_000913", + 3441675, + "-", + 621 + ] + ], + "md5": "8c5b22afedae0f333845f3fd7293ccc2", + "parent_gene": "", + "protein_md5": "21ff7290df0255854c7a7e36a8c2ec66", + "protein_translation": "MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010807" + ], + [ + "gene_synonym", + "ECK3284" + ], + [ + "gene_synonym", + "EcoGene:EG10910" + ], + [ + "gene_synonym", + "GI:16131176" + ], + [ + "gene_synonym", + "GeneID:947792" + ], + [ + "gene_synonym", + "JW3259" + ], + [ + "gene_synonym", + "NP_417756.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7R9" + ], + [ + "gene_synonym", + "b3297" + ], + [ + "gene_synonym", + "rpsK" + ] + ], + "dna_sequence": "ATGGCAAAGGCACCAATTCGTGCACGTAAACGTGTAAGAAAACAAGTCTCTGACGGCGTGGCTCATATCCATGCTTCTTTCAACAACACCATCGTGACTATCACTGATCGTCAGGGTAACGCGTTGGGTTGGGCAACAGCCGGTGGTTCCGGTTTCCGTGGTTCTCGCAAATCCACTCCGTTTGCAGCTCAGGTTGCAGCAGAGCGTTGCGCTGACGCCGTGAAAGAATACGGCATCAAGAATCTGGAAGTTATGGTTAAAGGTCCGGGTCCAGGCCGCGAATCTACTATTCGTGCTCTGAACGCCGCAGGTTTCCGCATCACTAACATTACTGATGTGACTCCGATCCCTCATAACGGTTGTCGTCCGCCGAAAAAACGTCGCGTATAA", + "dna_sequence_length": 390, + "functions": [ + "30S ribosomal subunit protein S11" + ], + "id": "CDS_3235", + "location": [ + [ + "NC_000913", + 3442098, + "-", + 390 + ] + ], + "md5": "5cdfa4ae3de67d3216d79fb5c11a5ca8", + "parent_gene": "", + "protein_md5": "b3f2d60e9479262be013fc0afb0be596", + "protein_translation": "MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010809" + ], + [ + "gene_synonym", + "ECK3285" + ], + [ + "gene_synonym", + "EcoGene:EG10912" + ], + [ + "gene_synonym", + "GI:16131177" + ], + [ + "gene_synonym", + "GeneID:947791" + ], + [ + "gene_synonym", + "JW3260" + ], + [ + "gene_synonym", + "NP_417757.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7S9" + ], + [ + "gene_synonym", + "b3298" + ], + [ + "gene_synonym", + "rpsM" + ] + ], + "dna_sequence": "GTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGCCATCCTGGCTGCAGCGGGTATCGCTGAAGATGTTAAGATCAGTGAGCTGTCTGAAGGACAAATCGACACGCTGCGTGACGAAGTTGCCAAATTTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGATCAAGAAATAA", + "dna_sequence_length": 357, + "functions": [ + "30S ribosomal subunit protein S13" + ], + "id": "CDS_3236", + "location": [ + [ + "NC_000913", + 3442471, + "-", + 357 + ] + ], + "md5": "ce4e7f56375739e0ad6494db9e855211", + "parent_gene": "", + "protein_md5": "d6e069e7f59d1a6e5d5ccea42b8ae93a", + "protein_translation": "MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010812" + ], + [ + "gene_synonym", + "ECK3286" + ], + [ + "gene_synonym", + "EcoGene:EG11232" + ], + [ + "gene_synonym", + "GI:16131178" + ], + [ + "gene_synonym", + "GeneID:947805" + ], + [ + "gene_synonym", + "JW3261" + ], + [ + "gene_synonym", + "NP_417758.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Q6" + ], + [ + "gene_synonym", + "b3299" + ], + [ + "gene_synonym", + "rpmJ" + ], + [ + "gene_synonym", + "secX" + ] + ], + "dna_sequence": "ATGAAAGTTCGTGCTTCCGTCAAGAAATTATGCCGTAACTGCAAAATCGTTAAGCGTGATGGTGTCATCCGTGTGATTTGCAGTGCCGAGCCGAAGCATAAACAGCGCCAAGGCTGA", + "dna_sequence_length": 117, + "functions": [ + "50S ribosomal subunit protein L36" + ], + "id": "CDS_3237", + "location": [ + [ + "NC_000913", + 3442734, + "-", + 117 + ] + ], + "md5": "b3e734790f750ba1749d9d80b3d4c05c", + "parent_gene": "", + "protein_md5": "1d39cb39316a9c2998ec292730c96ef2", + "protein_translation": "MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG", + "protein_translation_length": 38, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010814" + ], + [ + "gene_synonym", + "ECK3287" + ], + [ + "gene_synonym", + "EcoGene:EG10766" + ], + [ + "gene_synonym", + "GI:16131179" + ], + [ + "gene_synonym", + "GeneID:947799" + ], + [ + "gene_synonym", + "JW3262" + ], + [ + "gene_synonym", + "NP_417759.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGA2" + ], + [ + "gene_synonym", + "b3300" + ], + [ + "gene_synonym", + "prlA" + ], + [ + "gene_synonym", + "secY" + ] + ], + "dna_sequence": "ATGGCTAAACAACCGGGATTAGATTTTCAAAGTGCCAAAGGTGGCTTAGGCGAGCTGAAACGCAGACTGCTGTTTGTTATCGGTGCGCTGATTGTGTTCCGTATTGGCTCTTTTATTCCGATCCCTGGTATTGATGCCGCTGTACTTGCCAAACTGCTTGAGCAACAGCGAGGCACCATCATTGAGATGTTTAACATGTTCTCTGGTGGTGCTCTCAGCCGTGCTTCTATCTTTGCTCTGGGGATCATGCCGTATATTTCGGCGTCGATCATTATCCAGCTGCTGACGGTGGTTCACCCAACGTTGGCAGAAATTAAGAAAGAAGGGGAGTCTGGTCGTCGTAAGATCAGCCAGTACACCCGCTACGGTACTCTGGTGCTGGCAATATTCCAGTCGATCGGTATTGCTACCGGTCTGCCGAATATGCCTGGTATGCAAGGCCTGGTGATTAACCCGGGCTTTGCATTCTACTTCACCGCTGTTGTAAGTCTGGTCACAGGAACCATGTTCCTGATGTGGTTGGGCGAACAGATTACTGAACGAGGTATCGGCAACGGTATTTCAATCATTATCTTCGCCGGTATTGTCGCGGGACTCCCGCCAGCCATTGCCCATACTATCGAGCAAGCGCGTCAAGGCGACCTGCACTTCCTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACGCCGCATTGTGGTAAACTACGCGAAACGTCAGCAAGGTCGTCGTGTCTATGCTGCACAGAGCACACATTTACCGCTGAAAGTGAATATGGCGGGGGTAATCCCGGCAATCTTCGCTTCCAGTATTATTCTGTTCCCGGCGACCATCGCGTCATGGTTCGGGGGCGGTACTGGTTGGAACTGGCTGACAACAATTTCGCTGTATTTGCAGCCTGGGCAACCGCTTTATGTGTTACTCTATGCGTCTGCAATCATCTTCTTCTGTTTCTTCTACACGGCGTTGGTTTTCAACCCGCGTGAAACAGCAGATAACCTGAAGAAGTCCGGTGCATTTGTACCAGGAATTCGTCCGGGAGAGCAAACGGCGAAGTATATCGATAAAGTAATGACCCGCCTGACCCTGGTTGGTGCGCTGTATATTACCTTTATCTGCCTGATCCCGGAGTTCATGCGTGATGCAATGAAAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTCAAGTGCAAACTCTGATGATGTCCAGTCAGTATGAGTCTGCATTGAAGAAGGCGAACCTGAAAGGCTACGGCCGATAA", + "dna_sequence_length": 1332, + "functions": [ + "preprotein translocase membrane subunit" + ], + "id": "CDS_3238", + "location": [ + [ + "NC_000913", + 3444097, + "-", + 1332 + ] + ], + "md5": "59906aeb00e4a0fa3976f62708d10963", + "parent_gene": "", + "protein_md5": "4cd214bd2268cc5ab7f4398b9cbc6ce0", + "protein_translation": "MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010819" + ], + [ + "gene_synonym", + "ECK3288" + ], + [ + "gene_synonym", + "EcoGene:EG10876" + ], + [ + "gene_synonym", + "GI:16131180" + ], + [ + "gene_synonym", + "GeneID:947798" + ], + [ + "gene_synonym", + "JW3263" + ], + [ + "gene_synonym", + "NP_417760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02413" + ], + [ + "gene_synonym", + "b3301" + ], + [ + "gene_synonym", + "rplO" + ] + ], + "dna_sequence": "ATGCGTTTAAATACTCTGTCTCCGGCCGAAGGCTCCAAAAAGGCGGGTAAACGCCTGGGTCGTGGTATCGGTTCTGGCCTCGGTAAAACCGGTGGTCGTGGTCACAAAGGTCAGAAGTCTCGTTCTGGCGGTGGCGTACGTCGCGGTTTCGAGGGTGGTCAGATGCCTCTGTACCGTCGTCTGCCGAAATTCGGCTTCACTTCTCGTAAAGCAGCGATTACAGCCGAAATTCGTCTGTCTGACCTGGCTAAAGTAGAAGGCGGTGTAGTAGACCTGAACACGCTGAAAGCGGCTAACATTATCGGTATCCAGATCGAGTTCGCGAAAGTGATCCTGGCTGGCGAAGTAACGACTCCGGTAACTGTTCGTGGCCTGCGTGTTACTAAAGGCGCTCGTGCTGCTATCGAAGCTGCTGGCGGTAAAATCGAGGAATAA", + "dna_sequence_length": 435, + "functions": [ + "50S ribosomal subunit protein L15" + ], + "id": "CDS_3239", + "location": [ + [ + "NC_000913", + 3444539, + "-", + 435 + ] + ], + "md5": "00bb6233a330a55387427543d3bdd1c9", + "parent_gene": "", + "protein_md5": "dbe6bebee8554c803fd1f9fd03723cdc", + "protein_translation": "MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010821" + ], + [ + "gene_synonym", + "ECK3289" + ], + [ + "gene_synonym", + "EcoGene:EG10888" + ], + [ + "gene_synonym", + "GI:16131181" + ], + [ + "gene_synonym", + "GeneID:947797" + ], + [ + "gene_synonym", + "JW3264" + ], + [ + "gene_synonym", + "NP_417761.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG51" + ], + [ + "gene_synonym", + "b3302" + ], + [ + "gene_synonym", + "rpmD" + ] + ], + "dna_sequence": "ATGGCAAAGACTATTAAAATTACTCAAACCCGCAGTGCAATCGGTCGTCTGCCGAAACACAAGGCAACGCTGCTTGGCCTGGGTCTGCGTCGTATTGGTCACACCGTAGAGCGCGAGGATACTCCTGCTATTCGCGGTATGATCAACGCGGTTTCCTTCATGGTTAAAGTTGAGGAGTAA", + "dna_sequence_length": 180, + "functions": [ + "50S ribosomal subunit protein L30" + ], + "id": "CDS_3240", + "location": [ + [ + "NC_000913", + 3444722, + "-", + 180 + ] + ], + "md5": "1c9ccb162d82cc7821d505bb50b080e8", + "parent_gene": "", + "protein_md5": "f3f9af9f0f3baa9ec3319b1573a90dfc", + "protein_translation": "MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE", + "protein_translation_length": 59, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010823" + ], + [ + "gene_synonym", + "ECK3290" + ], + [ + "gene_synonym", + "EcoGene:EG10904" + ], + [ + "gene_synonym", + "GI:16131182" + ], + [ + "gene_synonym", + "GeneID:947795" + ], + [ + "gene_synonym", + "JW3265" + ], + [ + "gene_synonym", + "NP_417762.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7W1" + ], + [ + "gene_synonym", + "b3303" + ], + [ + "gene_synonym", + "eps" + ], + [ + "gene_synonym", + "rpsE" + ], + [ + "gene_synonym", + "spc" + ], + [ + "gene_synonym", + "spcA" + ] + ], + "dna_sequence": "ATGGCTCACATCGAAAAACAAGCTGGCGAACTGCAGGAAAAGCTGATCGCGGTAAACCGCGTATCTAAAACCGTTAAAGGTGGTCGTATTTTCTCCTTCACAGCTCTGACTGTAGTTGGCGATGGTAACGGTCGCGTTGGTTTTGGTTACGGTAAAGCGCGTGAAGTTCCAGCAGCGATCCAGAAAGCGATGGAAAAAGCCCGTCGCAATATGATTAACGTCGCGCTGAATAACGGCACTCTGCAACACCCTGTTAAAGGTGTTCACACGGGTTCTCGCGTATTCATGCAGCCGGCTTCCGAAGGTACCGGTATCATCGCCGGTGGTGCAATGCGCGCCGTTCTGGAAGTCGCTGGGGTTCATAACGTTCTGGCTAAAGCCTATGGTTCCACCAACCCGATCAACGTGGTTCGTGCAACTATTGATGGCCTGGAAAATATGAATTCTCCAGAAATGGTCGCTGCCAAGCGTGGTAAATCCGTTGAAGAAATTCTGGGGAAATAA", + "dna_sequence_length": 504, + "functions": [ + "30S ribosomal subunit protein S5" + ], + "id": "CDS_3241", + "location": [ + [ + "NC_000913", + 3445229, + "-", + 504 + ] + ], + "md5": "1108c02ba1f562b362d1c47916347aa6", + "parent_gene": "", + "protein_md5": "5e26b9261841fedfc3f886e196ad600b", + "protein_translation": "MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010825" + ], + [ + "gene_synonym", + "ECK3291" + ], + [ + "gene_synonym", + "EcoGene:EG10879" + ], + [ + "gene_synonym", + "GI:16131183" + ], + [ + "gene_synonym", + "GeneID:947804" + ], + [ + "gene_synonym", + "JW3266" + ], + [ + "gene_synonym", + "NP_417763.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C018" + ], + [ + "gene_synonym", + "b3304" + ], + [ + "gene_synonym", + "rplR" + ] + ], + "dna_sequence": "ATGGATAAGAAATCTGCTCGTATCCGTCGTGCGACCCGCGCACGCCGCAAGCTCCAGGAGCTGGGCGCAACTCGCCTGGTGGTACATCGTACCCCGCGTCACATTTACGCACAGGTAATTGCACCGAACGGTTCTGAAGTTCTGGTAGCTGCTTCTACTGTAGAAAAAGCTATCGCTGAACAACTGAAGTACACCGGTAACAAAGACGCGGCTGCAGCTGTGGGTAAAGCTGTCGCTGAACGCGCTCTGGAAAAAGGCATCAAAGATGTATCCTTTGACCGTTCCGGGTTCCAATATCATGGTCGTGTCCAGGCACTGGCAGATGCTGCCCGTGAAGCTGGCCTTCAGTTCTAA", + "dna_sequence_length": 354, + "functions": [ + "50S ribosomal subunit protein L18" + ], + "id": "CDS_3242", + "location": [ + [ + "NC_000913", + 3445597, + "-", + 354 + ] + ], + "md5": "d7d1ebb69eebee8be64b59f59f002e97", + "parent_gene": "", + "protein_md5": "56aa23d4e137982cf428a6ee5372d2cc", + "protein_translation": "MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010827" + ], + [ + "gene_synonym", + "ECK3292" + ], + [ + "gene_synonym", + "EcoGene:EG10869" + ], + [ + "gene_synonym", + "GI:16131184" + ], + [ + "gene_synonym", + "GeneID:947803" + ], + [ + "gene_synonym", + "JW3267" + ], + [ + "gene_synonym", + "NP_417764.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG55" + ], + [ + "gene_synonym", + "b3305" + ], + [ + "gene_synonym", + "rplF" + ] + ], + "dna_sequence": "ATGTCTCGTGTTGCTAAAGCACCGGTCGTTGTTCCTGCCGGCGTTGACGTAAAAATCAACGGTCAGGTTATTACGATCAAAGGTAAAAACGGCGAGCTGACTCGTACTCTCAACGATGCTGTTGAAGTTAAACATGCAGATAATACCCTGACCTTCGGTCCGCGTGATGGTTACGCAGACGGTTGGGCACAGGCTGGTACCGCGCGTGCCCTGCTGAACTCAATGGTTATCGGTGTTACCGAAGGCTTCACTAAGAAGCTGCAGCTGGTTGGTGTAGGTTACCGTGCAGCGGTTAAAGGCAATGTGATTAACCTGTCTCTGGGTTTCTCTCATCCTGTTGACCATCAGCTGCCTGCGGGTATCACTGCTGAATGTCCGACTCAGACTGAAATCGTGCTGAAAGGCGCTGATAAGCAGGTGATCGGCCAGGTTGCAGCGGATCTGCGCGCCTACCGTCGTCCTGAGCCTTATAAAGGCAAGGGTGTTCGTTACGCCGACGAAGTCGTGCGTACCAAAGAGGCTAAGAAGAAGTAA", + "dna_sequence_length": 534, + "functions": [ + "50S ribosomal subunit protein L6" + ], + "id": "CDS_3243", + "location": [ + [ + "NC_000913", + 3446140, + "-", + 534 + ] + ], + "md5": "c346388739fb20934a94c2202a9a3508", + "parent_gene": "", + "protein_md5": "fca3d6d18d398b02d8ecfea1adc85eee", + "protein_translation": "MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK", + "protein_translation_length": 177, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010829" + ], + [ + "gene_synonym", + "ECK3293" + ], + [ + "gene_synonym", + "EcoGene:EG10907" + ], + [ + "gene_synonym", + "GI:16131185" + ], + [ + "gene_synonym", + "GeneID:947802" + ], + [ + "gene_synonym", + "JW3268" + ], + [ + "gene_synonym", + "NP_417765.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7W7" + ], + [ + "gene_synonym", + "b3306" + ], + [ + "gene_synonym", + "rpsH" + ] + ], + "dna_sequence": "ATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAGAAGGTTTTATTGAAGATTTTAAAGTTGAAGGCGACACCAAGCCTGAACTGGAACTTACTCTGAAGTATTTCCAGGGCAAAGCTGTTGTAGAAAGCATTCAGCGTGTCAGCCGCCCAGGTCTGCGCATCTATAAACGTAAAGATGAGCTGCCGAAAGTTATGGCGGGTCTGGGTATCGCAGTTGTTTCTACCTCTAAAGGTGTTATGACTGATCGTGCAGCGCGCCAGGCTGGTCTTGGTGGCGAAATTATCTGCTACGTAGCCTAA", + "dna_sequence_length": 393, + "functions": [ + "30S ribosomal subunit protein S8" + ], + "id": "CDS_3244", + "location": [ + [ + "NC_000913", + 3446545, + "-", + 393 + ] + ], + "md5": "c1aae242b2cde493649ffb4fbc82f729", + "parent_gene": "", + "protein_md5": "98f615537815942b22a86925403a8f47", + "protein_translation": "MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010831" + ], + [ + "gene_synonym", + "ECK3294" + ], + [ + "gene_synonym", + "EcoGene:EG10913" + ], + [ + "gene_synonym", + "GI:16131186" + ], + [ + "gene_synonym", + "GeneID:947801" + ], + [ + "gene_synonym", + "JW3269" + ], + [ + "gene_synonym", + "NP_417766.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG59" + ], + [ + "gene_synonym", + "b3307" + ], + [ + "gene_synonym", + "rpsN" + ] + ], + "dna_sequence": "ATGGCTAAGCAATCAATGAAAGCACGCGAAGTAAAACGCGTAGCTTTAGCTGATAAATACTTCGCGAAACGCGCTGAACTGAAAGCGATCATCTCTGATGTGAACGCTTCCGACGAAGATCGTTGGAACGCTGTTCTCAAGCTGCAGACTCTGCCGCGTGATTCCAGCCCGTCTCGTCAGCGTAACCGCTGCCGTCAAACAGGTCGTCCGCATGGTTTCCTGCGGAAGTTCGGGTTGAGCCGTATTAAGGTCCGTGAAGCCGCTATGCGCGGTGAAATCCCGGGTCTGAAAAAGGCTAGCTGGTAA", + "dna_sequence_length": 306, + "functions": [ + "30S ribosomal subunit protein S14" + ], + "id": "CDS_3245", + "location": [ + [ + "NC_000913", + 3446884, + "-", + 306 + ] + ], + "md5": "c6968d3cdecb6fa7ddfc86ef7372c7c9", + "parent_gene": "", + "protein_md5": "7db5f0a9ed08d687fd023064e70bb876", + "protein_translation": "MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010833" + ], + [ + "gene_synonym", + "ECK3295" + ], + [ + "gene_synonym", + "EcoGene:EG10868" + ], + [ + "gene_synonym", + "GI:16131187" + ], + [ + "gene_synonym", + "GeneID:947800" + ], + [ + "gene_synonym", + "JW3270" + ], + [ + "gene_synonym", + "NP_417767.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62399" + ], + [ + "gene_synonym", + "b3308" + ], + [ + "gene_synonym", + "rplE" + ] + ], + "dna_sequence": "ATGGCGAAACTGCATGATTACTACAAAGACGAAGTAGTTAAAAAACTCATGACTGAGTTTAACTACAATTCTGTCATGCAAGTCCCTCGGGTCGAGAAGATCACCCTGAACATGGGTGTTGGTGAAGCGATCGCTGACAAAAAACTGCTGGATAACGCAGCAGCAGACCTGGCAGCAATCTCCGGTCAAAAACCGCTGATCACCAAAGCACGCAAATCTGTTGCAGGCTTCAAAATCCGTCAGGGCTATCCGATCGGCTGTAAAGTAACTCTGCGTGGCGAACGCATGTGGGAGTTCTTTGAGCGCCTGATCACTATTGCTGTACCTCGTATCCGTGACTTCCGTGGCCTGTCCGCTAAGTCTTTCGACGGTCGTGGTAACTACAGCATGGGTGTCCGTGAGCAGATCATCTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGATATTACCATTACCACTACTGCGAAATCTGACGAAGAAGGCCGCGCTCTGCTGGCTGCCTTTGACTTCCCGTTCCGCAAGTAA", + "dna_sequence_length": 540, + "functions": [ + "50S ribosomal subunit protein L5" + ], + "id": "CDS_3246", + "location": [ + [ + "NC_000913", + 3447438, + "-", + 540 + ] + ], + "md5": "724484d563441e7b8b6ed725a2ee8549", + "parent_gene": "", + "protein_md5": "1a6377b3ef5b5fc6796affa39279224a", + "protein_translation": "MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010835" + ], + [ + "gene_synonym", + "ECK3296" + ], + [ + "gene_synonym", + "EcoGene:EG10884" + ], + [ + "gene_synonym", + "GI:16131188" + ], + [ + "gene_synonym", + "GeneID:947810" + ], + [ + "gene_synonym", + "JW3271" + ], + [ + "gene_synonym", + "NP_417768.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60624" + ], + [ + "gene_synonym", + "b3309" + ], + [ + "gene_synonym", + "rplX" + ] + ], + "dna_sequence": "ATGGCAGCGAAAATCCGTCGTGATGACGAAGTTATCGTGTTAACCGGTAAAGATAAAGGTAAACGCGGTAAAGTTAAGAATGTCCTGTCTTCCGGCAAGGTCATTGTTGAAGGTATCAACCTGGTTAAGAAACATCAGAAGCCGGTTCCGGCCCTGAACCAACCGGGTGGCATCGTTGAAAAAGAAGCCGCTATTCAGGTTTCCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAGTCCGTTTCTTCAAGTCTAACAGCGAAACTATCAAGTAA", + "dna_sequence_length": 315, + "functions": [ + "50S ribosomal subunit protein L24" + ], + "id": "CDS_3247", + "location": [ + [ + "NC_000913", + 3447767, + "-", + 315 + ] + ], + "md5": "d716bcb77e0fa34484c4dd121a2af762", + "parent_gene": "", + "protein_md5": "17619cacd8795734f1e7bcc936a920d2", + "protein_translation": "MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010837" + ], + [ + "gene_synonym", + "ECK3297" + ], + [ + "gene_synonym", + "EcoGene:EG10875" + ], + [ + "gene_synonym", + "GI:16131189" + ], + [ + "gene_synonym", + "GeneID:947809" + ], + [ + "gene_synonym", + "JW3272" + ], + [ + "gene_synonym", + "NP_417769.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADY3" + ], + [ + "gene_synonym", + "b3310" + ], + [ + "gene_synonym", + "rplN" + ] + ], + "dna_sequence": "ATGATCCAAGAACAGACTATGCTGAACGTCGCCGACAACTCCGGTGCACGTCGCGTAATGTGTATCAAGGTTCTGGGTGGCTCGCACCGTCGCTACGCAGGCGTAGGCGACATCATCAAGATCACCATCAAAGAAGCAATTCCGCGTGGTAAGGTCAAAAAAGGTGATGTGCTGAAGGCGGTAGTGGTGCGCACCAAGAAGGGTGTTCGTCGCCCGGACGGTTCTGTCATTCGCTTCGATGGTAATGCTTGTGTTCTTCTGAACAACAACAGCGAGCAGCCTATCGGTACGCGTATTTTTGGGCCGGTAACTCGTGAGCTTCGTAGTGAGAAGTTCATGAAAATTATCTCTCTGGCACCAGAAGTACTCTAA", + "dna_sequence_length": 372, + "functions": [ + "50S ribosomal subunit protein L14" + ], + "id": "CDS_3248", + "location": [ + [ + "NC_000913", + 3448149, + "-", + 372 + ] + ], + "md5": "11ca4d229743f60993bb17f6c7aecdd9", + "parent_gene": "", + "protein_md5": "88dcf3c63abf6783733af222cd11271c", + "protein_translation": "MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL", + "protein_translation_length": 123, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010840" + ], + [ + "gene_synonym", + "ECK3298" + ], + [ + "gene_synonym", + "EcoGene:EG10916" + ], + [ + "gene_synonym", + "GI:16131190" + ], + [ + "gene_synonym", + "GeneID:947808" + ], + [ + "gene_synonym", + "JW3273" + ], + [ + "gene_synonym", + "NP_417770.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG63" + ], + [ + "gene_synonym", + "b3311" + ], + [ + "gene_synonym", + "neaA" + ], + [ + "gene_synonym", + "rpsQ" + ] + ], + "dna_sequence": "ATGACCGATAAAATCCGTACTCTGCAAGGTCGCGTTGTTAGCGACAAAATGGAGAAATCCATTGTTGTTGCTATCGAACGTTTTGTGAAACACCCGATCTACGGTAAATTCATCAAGCGTACGACCAAACTGCACGTACATGACGAGAACAACGAATGCGGTATCGGTGACGTGGTTGAAATCCGCGAATGCCGTCCGCTGTCCAAGACTAAATCCTGGACGCTGGTTCGCGTTGTAGAGAAAGCGGTTCTGTAA", + "dna_sequence_length": 255, + "functions": [ + "30S ribosomal subunit protein S17" + ], + "id": "CDS_3249", + "location": [ + [ + "NC_000913", + 3448568, + "-", + 255 + ] + ], + "md5": "c10b20d7fc727993b5c0ba649a0c98a5", + "parent_gene": "", + "protein_md5": "269efc68924760e54d96bb26e1d8210a", + "protein_translation": "MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010842" + ], + [ + "gene_synonym", + "ECK3299" + ], + [ + "gene_synonym", + "EcoGene:EG10887" + ], + [ + "gene_synonym", + "GI:16131191" + ], + [ + "gene_synonym", + "GeneID:947807" + ], + [ + "gene_synonym", + "JW3274" + ], + [ + "gene_synonym", + "NP_417771.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7M6" + ], + [ + "gene_synonym", + "b3312" + ], + [ + "gene_synonym", + "rpmC" + ] + ], + "dna_sequence": "ATGAAAGCAAAAGAGCTGCGTGAGAAGAGCGTTGAAGAGCTGAACACCGAGCTGCTGAACCTGCTGCGTGAGCAGTTCAACCTGCGTATGCAGGCTGCAAGTGGCCAGCTGCAACAGTCTCACCTGTTGAAGCAAGTGCGTCGCGATGTCGCACGCGTTAAGACTTTACTGAACGAGAAGGCGGGTGCGTAA", + "dna_sequence_length": 192, + "functions": [ + "50S ribosomal subunit protein L29" + ], + "id": "CDS_3250", + "location": [ + [ + "NC_000913", + 3448759, + "-", + 192 + ] + ], + "md5": "2408f6d046d8b0b3efd41773856ce91b", + "parent_gene": "", + "protein_md5": "a7d6f728c27ff151616ca9b508e75108", + "protein_translation": "MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010846" + ], + [ + "gene_synonym", + "ECK3300" + ], + [ + "gene_synonym", + "EcoGene:EG10877" + ], + [ + "gene_synonym", + "GI:16131192" + ], + [ + "gene_synonym", + "GeneID:947806" + ], + [ + "gene_synonym", + "JW3275" + ], + [ + "gene_synonym", + "NP_417772.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADY7" + ], + [ + "gene_synonym", + "b3313" + ], + [ + "gene_synonym", + "rplP" + ] + ], + "dna_sequence": "ATGTTACAACCAAAGCGTACAAAATTCCGTAAAATGCACAAAGGCCGTAACCGCGGTCTGGCGCAGGGTACGGATGTTAGCTTCGGCAGCTTCGGTCTGAAAGCTGTTGGCCGTGGTCGTCTGACTGCCCGTCAGATCGAAGCAGCACGTCGTGCTATGACCCGTGCAGTTAAGCGTCAAGGTAAGATCTGGATCCGTGTGTTCCCGGACAAACCGATCACTGAAAAGCCGCTGGCAGTGCGTATGGGTAAAGGTAAAGGTAACGTGGAGTATTGGGTTGCCTTGATTCAGCCGGGTAAAGTCCTGTATGAAATGGACGGTGTTCCGGAAGAGCTGGCCCGTGAAGCATTCAAGCTGGCAGCAGCGAAACTGCCGATTAAAACCACCTTTGTAACTAAGACGGTGATGTAA", + "dna_sequence_length": 411, + "functions": [ + "50S ribosomal subunit protein L16" + ], + "id": "CDS_3251", + "location": [ + [ + "NC_000913", + 3449169, + "-", + 411 + ] + ], + "md5": "609f566d9580bd0618e508cfd930f0ca", + "parent_gene": "", + "protein_md5": "159e6ede332e7763b3b56f0b925339f5", + "protein_translation": "MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010848" + ], + [ + "gene_synonym", + "ECK3301" + ], + [ + "gene_synonym", + "EcoGene:EG10902" + ], + [ + "gene_synonym", + "GI:16131193" + ], + [ + "gene_synonym", + "GeneID:947814" + ], + [ + "gene_synonym", + "JW3276" + ], + [ + "gene_synonym", + "NP_417773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7V3" + ], + [ + "gene_synonym", + "b3314" + ], + [ + "gene_synonym", + "rpsC" + ] + ], + "dna_sequence": "ATGGGTCAGAAAGTACATCCTAATGGTATTCGCCTGGGTATTGTAAAACCATGGAACTCTACCTGGTTTGCGAACACCAAAGAATTCGCTGACAACCTGGACAGCGATTTTAAAGTACGTCAGTACCTGACTAAGGAACTGGCTAAAGCGTCCGTATCTCGTATCGTTATCGAGCGTCCGGCTAAGAGCATCCGTGTAACCATTCACACTGCTCGCCCGGGTATCGTTATCGGTAAAAAAGGTGAAGACGTAGAAAAACTGCGTAAGGTCGTAGCGGACATCGCTGGCGTTCCTGCACAGATCAACATCGCCGAAGTTCGTAAGCCTGAACTGGACGCAAAACTGGTTGCTGACAGCATCACTTCTCAGCTGGAACGTCGCGTTATGTTCCGTCGTGCTATGAAGCGTGCTGTACAGAACGCAATGCGTCTGGGCGCTAAAGGTATTAAAGTTGAAGTTAGCGGCCGTCTGGGCGGCGCGGAAATCGCACGTACCGAATGGTACCGCGAAGGTCGCGTACCGCTGCACACTCTGCGTGCTGACATCGACTACAACACCTCTGAAGCGCACACCACTTACGGTGTAATCGGCGTTAAAGTGTGGATCTTCAAAGGCGAGATCCTGGGTGGTATGGCTGCTGTTGAACAACCGGAAAAACCGGCTGCTCAGCCTAAAAAGCAGCAGCGTAAAGGCCGTAAATAA", + "dna_sequence_length": 702, + "functions": [ + "30S ribosomal subunit protein S3" + ], + "id": "CDS_3252", + "location": [ + [ + "NC_000913", + 3449883, + "-", + 702 + ] + ], + "md5": "49b7d928e57e8a9ff17e085eda72bfe6", + "parent_gene": "", + "protein_md5": "015d00c9b7f7f2897a9ebd700c9a9d69", + "protein_translation": "MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010850" + ], + [ + "gene_synonym", + "ECK3302" + ], + [ + "gene_synonym", + "EcoGene:EG10882" + ], + [ + "gene_synonym", + "GI:16131194" + ], + [ + "gene_synonym", + "GeneID:947813" + ], + [ + "gene_synonym", + "JW3277" + ], + [ + "gene_synonym", + "NP_417774.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61175" + ], + [ + "gene_synonym", + "b3315" + ], + [ + "gene_synonym", + "eryB" + ], + [ + "gene_synonym", + "rplV" + ] + ], + "dna_sequence": "ATGGAAACTATCGCTAAACATCGCCATGCTCGTTCTTCTGCTCAGAAGGTTCGCCTTGTTGCTGACCTGATTCGCGGTAAGAAAGTGTCGCAGGCTCTGGATATTTTGACCTACACCAACAAGAAAGCGGCTGTACTGGTCAAGAAAGTTCTGGAATCTGCCATTGCTAACGCTGAACACAACGATGGCGCTGACATTGACGATCTGAAAGTTACGAAAATTTTCGTAGACGAAGGCCCGAGCATGAAGCGCATTATGCCGCGTGCAAAAGGTCGTGCAGATCGCATCCTGAAGCGCACCAGCCACATCACTGTGGTTGTGTCCGATCGCTGA", + "dna_sequence_length": 333, + "functions": [ + "50S ribosomal subunit protein L22" + ], + "id": "CDS_3253", + "location": [ + [ + "NC_000913", + 3450233, + "-", + 333 + ] + ], + "md5": "88b5f3dac5278253a6d88026245262d3", + "parent_gene": "", + "protein_md5": "d44845a02f8ee59d1e9b327b0534f8f6", + "protein_translation": "METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010852" + ], + [ + "gene_synonym", + "ECK3303" + ], + [ + "gene_synonym", + "EcoGene:EG10918" + ], + [ + "gene_synonym", + "GI:16131195" + ], + [ + "gene_synonym", + "GeneID:947811" + ], + [ + "gene_synonym", + "JW3278" + ], + [ + "gene_synonym", + "NP_417775.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7U3" + ], + [ + "gene_synonym", + "b3316" + ], + [ + "gene_synonym", + "rpsS" + ] + ], + "dna_sequence": "ATGCCACGTTCTCTCAAGAAAGGTCCTTTTATTGACCTGCACTTGCTGAAGAAGGTAGAGAAAGCGGTGGAAAGCGGAGACAAGAAGCCCCTGCGCACTTGGTCCCGTCGTTCAACGATCTTTCCTAACATGATCGGTTTGACCATCGCTGTCCATAATGGTCGTCAGCACGTTCCGGTATTTGTAACCGACGAAATGGTTGGTCACAAACTGGGTGAATTCGCACCGACTCGTACTTATCGCGGCCACGCTGCTGATAAAAAAGCGAAGAAGAAATAA", + "dna_sequence_length": 279, + "functions": [ + "30S ribosomal subunit protein S19" + ], + "id": "CDS_3254", + "location": [ + [ + "NC_000913", + 3450526, + "-", + 279 + ] + ], + "md5": "983b20ae350f5ef5a1a948833eb99b3e", + "parent_gene": "", + "protein_md5": "75dc389130382ce3a8c6078ff4f868d1", + "protein_translation": "MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010854" + ], + [ + "gene_synonym", + "ECK3304" + ], + [ + "gene_synonym", + "EcoGene:EG10865" + ], + [ + "gene_synonym", + "GI:16131196" + ], + [ + "gene_synonym", + "GeneID:947820" + ], + [ + "gene_synonym", + "JW3279" + ], + [ + "gene_synonym", + "NP_417776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60422" + ], + [ + "gene_synonym", + "b3317" + ], + [ + "gene_synonym", + "rplB" + ] + ], + "dna_sequence": "ATGGCAGTTGTTAAATGTAAACCGACATCTCCGGGTCGTCGCCACGTAGTTAAAGTGGTTAACCCTGAGCTGCACAAGGGCAAACCTTTTGCTCCGTTGCTGGAAAAAAACAGCAAATCCGGTGGTCGTAACAACAATGGCCGTATCACCACTCGTCATATCGGTGGTGGCCACAAGCAGGCTTACCGTATTGTTGACTTCAAACGCAACAAAGACGGTATCCCGGCAGTTGTTGAACGTCTTGAGTACGATCCGAACCGTTCCGCGAACATCGCGCTGGTTCTGTACAAAGACGGTGAACGCCGTTACATCCTGGCCCCTAAAGGCCTGAAAGCTGGCGACCAGATTCAGTCTGGCGTTGATGCTGCAATCAAACCAGGTAACACCCTGCCGATGCGCAACATCCCGGTTGGTTCTACTGTTCATAACGTAGAAATGAAACCAGGTAAAGGCGGTCAGCTGGCACGTTCCGCTGGTACTTACGTTCAGATCGTTGCTCGTGATGGTGCTTATGTCACCCTGCGTCTGCGTTCTGGTGAAATGCGTAAAGTAGAAGCAGACTGCCGTGCAACTCTGGGCGAAGTTGGCAATGCTGAGCATATGCTGCGCGTTCTGGGTAAAGCAGGTGCTGCACGCTGGCGTGGTGTTCGTCCGACCGTTCGCGGTACCGCGATGAACCCGGTAGACCACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCAGCAACAAGCGTACTGATAAATTCATCGTACGTCGCCGTAGCAAATAA", + "dna_sequence_length": 822, + "functions": [ + "50S ribosomal subunit protein L2" + ], + "id": "CDS_3255", + "location": [ + [ + "NC_000913", + 3451364, + "-", + 822 + ] + ], + "md5": "3ab1d3f4770a511c0c8d648d007fd115", + "parent_gene": "", + "protein_md5": "b8dda3d5223018c567ea5f3ca22e9fbc", + "protein_translation": "MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010856" + ], + [ + "gene_synonym", + "ECK3305" + ], + [ + "gene_synonym", + "EcoGene:EG10883" + ], + [ + "gene_synonym", + "GI:16131197" + ], + [ + "gene_synonym", + "GeneID:947819" + ], + [ + "gene_synonym", + "JW3280" + ], + [ + "gene_synonym", + "NP_417777.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADZ0" + ], + [ + "gene_synonym", + "b3318" + ], + [ + "gene_synonym", + "rplW" + ] + ], + "dna_sequence": "ATGATTCGTGAAGAACGTCTGCTGAAGGTGCTGCGTGCACCGCACGTTTCTGAAAAAGCGTCTACTGCGATGGAAAAATCCAACACCATCGTACTCAAAGTTGCTAAAGACGCGACCAAAGCAGAAATCAAAGCTGCTGTGCAGAAACTGTTTGAAGTCGAAGTCGAAGTCGTTAACACCCTGGTAGTTAAAGGGAAAGTTAAACGTCACGGACAGCGTATCGGTCGTCGTAGCGACTGGAAAAAAGCTTACGTCACCCTGAAAGAAGGCCAGAATCTGGACTTCGTTGGCGGCGCTGAGTAA", + "dna_sequence_length": 303, + "functions": [ + "50S ribosomal subunit protein L23" + ], + "id": "CDS_3256", + "location": [ + [ + "NC_000913", + 3451684, + "-", + 303 + ] + ], + "md5": "dc629749dce53edc9302a34708a8e2d1", + "parent_gene": "", + "protein_md5": "a9eb05a116a704d31881e542cf92b1be", + "protein_translation": "MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE", + "protein_translation_length": 100, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010858" + ], + [ + "gene_synonym", + "ECK3306" + ], + [ + "gene_synonym", + "EcoGene:EG10867" + ], + [ + "gene_synonym", + "GI:16131198" + ], + [ + "gene_synonym", + "GeneID:947818" + ], + [ + "gene_synonym", + "JW3281" + ], + [ + "gene_synonym", + "NP_417778.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60723" + ], + [ + "gene_synonym", + "b3319" + ], + [ + "gene_synonym", + "eryA" + ], + [ + "gene_synonym", + "rplD" + ] + ], + "dna_sequence": "ATGGAATTAGTATTGAAAGACGCGCAGAGCGCGCTGACTGTTTCCGAAACTACCTTCGGTCGTGATTTCAACGAAGCGCTGGTTCACCAGGTTGTTGTTGCTTATGCAGCTGGTGCTCGTCAGGGTACTCGTGCTCAGAAGACTCGTGCTGAAGTAACTGGTTCCGGTAAAAAACCGTGGCGCCAGAAAGGCACCGGCCGTGCGCGTTCTGGTTCTATCAAGAGCCCGATCTGGCGTTCTGGTGGCGTGACCTTTGCTGCTCGTCCGCAGGACCACAGTCAAAAAGTTAACAAGAAGATGTACCGCGGCGCGCTGAAAAGCATCCTGTCCGAACTGGTACGTCAGGATCGTCTGATCGTTGTCGAGAAGTTCTCTGTAGAAGCGCCGAAAACTAAGCTGCTGGCACAGAAACTGAAAGACATGGCTCTGGAAGATGTGCTGATCATCACCGGTGAGCTGGACGAAAACCTGTTCCTGGCTGCGCGCAACCTGCACAAGGTTGACGTACGCGATGCAACTGGTATCGACCCGGTTAGCCTGATCGCCTTCGACAAAGTCGTAATGACTGCTGATGCTGTTAAGCAAGTTGAGGAGATGCTGGCATGA", + "dna_sequence_length": 606, + "functions": [ + "50S ribosomal subunit protein L4" + ], + "id": "CDS_3257", + "location": [ + [ + "NC_000913", + 3452286, + "-", + 606 + ] + ], + "md5": "3415db91209c9cee9e3ea62e4771f244", + "parent_gene": "", + "protein_md5": "af999efcbd0a2375432bf21906bd585c", + "protein_translation": "MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010860" + ], + [ + "gene_synonym", + "ECK3307" + ], + [ + "gene_synonym", + "EcoGene:EG10866" + ], + [ + "gene_synonym", + "GI:16131199" + ], + [ + "gene_synonym", + "GeneID:947817" + ], + [ + "gene_synonym", + "JW3282" + ], + [ + "gene_synonym", + "NP_417779.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60438" + ], + [ + "gene_synonym", + "b3320" + ], + [ + "gene_synonym", + "rplC" + ] + ], + "dna_sequence": "ATGATTGGTTTAGTCGGTAAAAAAGTGGGTATGACCCGTATCTTCACAGAAGACGGCGTTTCTATCCCAGTAACCGTAATCGAAGTTGAAGCAAACCGCGTTACTCAGGTTAAAGACCTGGCTAACGATGGCTACCGTGCTATTCAGGTGACCACCGGTGCTAAAAAAGCTAACCGTGTGACCAAGCCTGAAGCTGGCCACTTCGCTAAAGCTGGCGTAGAAGCTGGCCGTGGTCTGTGGGAATTCCGCCTGGCTGAAGGCGAAGAGTTCACTGTAGGTCAGAGCATTAGCGTTGAACTGTTTGCTGACGTTAAAAAAGTTGACGTAACTGGCACCTCTAAAGGTAAAGGTTTCGCAGGTACCGTTAAGCGCTGGAACTTCCGTACCCAGGACGCTACTCACGGTAACTCCTTGTCTCACCGCGTTCCGGGTTCTATCGGTCAGAACCAGACTCCGGGCAAAGTGTTCAAAGGCAAGAAAATGGCAGGTCAGATGGGTAACGAACGTGTAACCGTTCAGAGCCTTGACGTAGTACGCGTTGACGCTGAGCGCAACCTGCTGCTGGTTAAAGGTGCTGTCCCGGGTGCAACCGGTAGCGACCTGATCGTTAAACCAGCTGTGAAGGCGTAA", + "dna_sequence_length": 630, + "functions": [ + "50S ribosomal subunit protein L3" + ], + "id": "CDS_3258", + "location": [ + [ + "NC_000913", + 3452926, + "-", + 630 + ] + ], + "md5": "659c411d3df825e0bbbdd2bc2216ba7b", + "parent_gene": "", + "protein_md5": "4c31ca787dff2e8979a12d5731b91705", + "protein_translation": "MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010862" + ], + [ + "gene_synonym", + "ECK3308" + ], + [ + "gene_synonym", + "EcoGene:EG10909" + ], + [ + "gene_synonym", + "GI:16131200" + ], + [ + "gene_synonym", + "GeneID:947816" + ], + [ + "gene_synonym", + "JW3283" + ], + [ + "gene_synonym", + "NP_417780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7R5" + ], + [ + "gene_synonym", + "b3321" + ], + [ + "gene_synonym", + "nusE" + ], + [ + "gene_synonym", + "rpsJ" + ] + ], + "dna_sequence": "ATGCAGAACCAAAGAATCCGTATCCGCCTGAAAGCGTTTGATCATCGTCTGATCGATCAAGCAACCGCGGAAATCGTCGAGACTGCCAAGCGCACTGGTGCGCAGGTCCGTGGTCCGATCCCGCTGCCGACACGCAAAGAGCGCTTCACTGTTCTGATCTCCCCGCACGTCAACAAAGACGCGCGCGATCAGTACGAAATCCGTACTCACTTGCGTCTGGTTGACATCGTTGAGCCAACCGAGAAAACCGTTGATGCTCTGATGCGTCTGGATCTGGCTGCCGGTGTAGACGTGCAGATCAGCCTGGGTTAA", + "dna_sequence_length": 312, + "functions": [ + "30S ribosomal subunit protein S10" + ], + "id": "CDS_3259", + "location": [ + [ + "NC_000913", + 3453270, + "-", + 312 + ] + ], + "md5": "9c0e9f924b5b95e95d43f2eddb4bb67b", + "parent_gene": "", + "protein_md5": "9d6129626f9f807a8ce60eb3fa40b527", + "protein_translation": "MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010865" + ], + [ + "gene_synonym", + "ECK3309" + ], + [ + "gene_synonym", + "EcoGene:EG11263" + ], + [ + "gene_synonym", + "GI:16131201" + ], + [ + "gene_synonym", + "GeneID:947826" + ], + [ + "gene_synonym", + "JW3284" + ], + [ + "gene_synonym", + "NP_417781.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03825" + ], + [ + "gene_synonym", + "b3322" + ], + [ + "gene_synonym", + "gspB" + ], + [ + "gene_synonym", + "pinO" + ], + [ + "gene_synonym", + "pioO" + ] + ], + "dna_sequence": "ATGTTTGAATTCTATATCGCCGCGCGTGAGCAGAAAGAAACAGGTCACCCTGGTATCTTCTCCCGACAAAAACACAGCACCATAATATATGTAATTTGTTTATTACTGATTTGCCTGTGGTTTGCAGGAATGGTGCTGGTTGGTGGGTATGCCAGGCAGCTATGGGTGCTTTGGATAGTAAAAGCCGAAGTCACTGTAGAGGCTGAAACGCCCGCTTTTAAACAATCAACACAACACTATTTCTTCAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTCGCGGTTGAGAATGCCCCCTCTTCTTCTGAAGACGAAGAAAATACTGTGGAAGAAAGCGAAGAGAAAGCCGGTTTAAGAGAGCGTGTCAAAAATGCACTGAACGAACTTGAGAGATAA", + "dna_sequence_length": 420, + "functions": [ + "part of gsp divergon involved in type II protein secretion" + ], + "id": "CDS_3260", + "location": [ + [ + "NC_000913", + 3453927, + "-", + 420 + ] + ], + "md5": "2427fa926b1ea8d625f1f3117e0d9721", + "parent_gene": "", + "protein_md5": "b6987b79a52b79d39ea0a6d578485e58", + "protein_translation": "MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGMVLVGGYARQLWVLWIVKAEVTVEAETPAFKQSTQHYFFKKQPLPVVESVEEEDDPGVAVENAPSSSEDEENTVEESEEKAGLRERVKNALNELER", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010867" + ], + [ + "gene_synonym", + "ECK3310" + ], + [ + "gene_synonym", + "EcoGene:EG12888" + ], + [ + "gene_synonym", + "GI:16131202" + ], + [ + "gene_synonym", + "GeneID:947825" + ], + [ + "gene_synonym", + "JW3285" + ], + [ + "gene_synonym", + "NP_417782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45756" + ], + [ + "gene_synonym", + "b3323" + ], + [ + "gene_synonym", + "gspA" + ], + [ + "gene_synonym", + "yheD" + ] + ], + "dna_sequence": "ATGTCTACGAGAAGAGAAGTTATTCTTTCCTGGTTGTGTGAGAAACGTCAAACCTGGCGTCTATGCTATTTGTTGGGTGAGGCTGGAAGTGGAAAAACCTGGCTGGCGCAGCAACTGCAAAAAGATAAACATCGCCGTGTGATTACTTTAAGCCTCGTTGTTTCCTGGCAAGGTAAGGCCGCATGGATCGTTACCGACGATAACGCGGCTGAACAGGGCTGCCGTGACAGCGCCTGGACGCGAGATGAGATGGCGGGGCAATTACTGCATGCGCTTCATCGAACTGATAGTCGCTGCCCTCTTATTATTATTGAAAATGCTCACCTGAATCACCGCCGCATACTTGATGATCTCCAACGCGCAATATCTCTTATTCCTGACGGTCAATTTTTGCTGATCGGCAGACCCGATCGAAAAGTCGAACGTGATTTTAAAAAACAGGGCATTGAACTTGTCTCGATAGGACGTCTGACGGAGCACGAACTTAAGGCAAGCATCCTTGAAGGTCAGAATATTGACCAACCCGATCTCCTTTTAACCGCCAGAGTTCTGAAACGGATAGCTTTATTATGTCGGGGCGATCGCAGAAAGCTGGCGCTTGCCGGCGAAACAATTCGCTTATTACAGCAAGCCGAGCAGACCAGCGTTTTCACAGCAAAACAATGGCGAATGATTTACCGCATATTGGGTGATAACCGCCCCCGGAAAATGCAGCTTGCCGTGGTGATGAGTGGAACCATTATCGCTCTTACCTGTGGTTGGCTACTGCTGTCCTCTTTTACAGCTACGTTACCCGTTCCTGCGTGGCTGATACCCGTAACGCCAGTAGTTAAACAAGATATGACTAAGGATATTGCTCATGTGGTGATGCGCGATAGTGAGGCGCTAAGCGTGTTATACGGCGTATGGGGGTACGAGGTCCCAGCTGATTCGGCCTGGTGCGATCAGGCAGTAAGAGCGGGGCTGGCATGTAAAAGTGGGAATGCTTCTTTACAAACATTGGTAGATCAGAATTTGCCCTGGATCGCATCGCTTAAAGTCGGGGACAAAAAATTGCCTGTTGTGGTCGTTCGCGTCGGTGAGGCTAGCGTTGATGTCCTCGTAGGTCAGCAAACGTGGACGCTGACACATAAATGGTTTGAGTCGGTATGGACGGGTGATTATCTTCTGTTGTGGAAAATGTCGCCGGAAGGGGAGAGTACCATTACGCGTGATAGCAGCGAGGAAGAGATTCTCTGGCTGGAAACGATGTTAAACCGCGCATTGCATATTTCGACAGAACCTTCGGCGGAGTGGCGTCCCTTGTTGGTAGAAAAAATAAAGCAATTTCAAAAAAGCCACCACTTGAAAACTGACGGTGTTGTTGGCTTTTCAACGTTAGTACATCTCTGGCAGGTGGCAGGGGAGAGTGCCTACTTATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGA", + "dna_sequence_length": 1470, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3261", + "location": [ + [ + "NC_000913", + 3455398, + "-", + 1470 + ] + ], + "md5": "b9e00e308a75a729c7caf4298a227f52", + "parent_gene": "", + "protein_md5": "4debf81d3296fd0f9a89452fce84c603", + "protein_translation": "MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK", + "protein_translation_length": 489, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010877" + ], + [ + "gene_synonym", + "ECK3311" + ], + [ + "gene_synonym", + "EcoGene:EG12889" + ], + [ + "gene_synonym", + "GI:16131203" + ], + [ + "gene_synonym", + "GeneID:947824" + ], + [ + "gene_synonym", + "JW3286" + ], + [ + "gene_synonym", + "NP_417783.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45757" + ], + [ + "gene_synonym", + "b3324" + ], + [ + "gene_synonym", + "gspC" + ], + [ + "gene_synonym", + "yheE" + ] + ], + "dna_sequence": "GTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGCCGCTTTATGGCGTAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTGGCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGTCTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGCGCCGGGAACGTTTATTAGAAAAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATCATCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGGGGAACTTACAGGAATGAATGGACTGCGTCATGAAAGGACTCAATAA", + "dna_sequence_length": 816, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3262", + "location": [ + [ + "NC_000913", + 3455578, + "+", + 816 + ] + ], + "md5": "cee22b4ab9bf5625d7bdacf91710938d", + "parent_gene": "", + "protein_md5": "42162f0c84c57dcfcf08fa7fe1e0dfd8", + "protein_translation": "MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010879" + ], + [ + "gene_synonym", + "ECK3312" + ], + [ + "gene_synonym", + "EcoGene:EG12890" + ], + [ + "gene_synonym", + "GI:90111569" + ], + [ + "gene_synonym", + "GeneID:947822" + ], + [ + "gene_synonym", + "JW5707" + ], + [ + "gene_synonym", + "NP_417784.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45758" + ], + [ + "gene_synonym", + "b3325" + ], + [ + "gene_synonym", + "gspD" + ], + [ + "gene_synonym", + "yheF" + ] + ], + "dna_sequence": "ATGAAAGGACTCAATAAAATCACCTGCTGCTTGCTGGCAGCACTACTCATGCCTTGTGCAGGACACGCTGAGAACGAACAATACGGCGCGAACTTCAATAACGCCGATATCCGCCAGTTCGTGGAAATAGTGGGTCAGCATCTTGGCAAAACGATCCTGATCGACCCTTCGGTACAGGGAACCATTTCCGTACGCAGTAATGATACGTTTAGCCAACAGGAGTACTACCAGTTCTTTTTAAGTATTCTTGATCTTTACGGTTATTCCGTGATCACGCTGGACAATGGTTTTCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTGGCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCCGAGATTCTTAATCAATTAATCAGCGAAAGCCACGGTAAAAGCCAGATGCCAGCCCTCCTCTCCGCGAAGATTGTGGCGGATAAGCGAACCAACTCTCTTATCATCAGTGGACCGGAAAAAGCACGCCAGCGCATCACTTCATTACTGAAAAGCCTTGATGTCGAAGAGAGCGAGGAAGGAAATACCCGGGTTTATTACCTGAAATATGCTAAAGCCACGAATCTGGTGGAAGTGCTAACCGGTGTTTCCGAAAAGCTGAAAGATGAAAAAGGGAATGCGCGTAAGCCCTCCTCTTCTGGCGCGATGGATAACGTCGCCATTACCGCCGATGAACAGACTAACTCTCTGGTCATTACCGCTGACCAGTCCGTCCAGGAAAAACTCGCCACGGTAATTGCGCGTCTGGACATTCGCCGTGCACAGGTGCTGGTTGAGGCAATCATCGTTGAAGTTCAGGATGGAAATGGACTAAACCTCGGCGTGCAATGGGCGAATAAAAACGTTGGCGCACAGCAATTTACCAATACCGGATTACCGATTTTTAACGCTGCGCAAGGTGTGGCTGATTATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCTTCAACGTGGGGCAGGATGTGCCGGTGCTATCCGGGTCACAGACCACTTCAGGGGATAACGTCTTTAATACCGTCGAACGCAAAACGGTGGGGACAAAACTCAAAGTTACTCCGCAGGTCAATGAAGGCGACGCGGTGTTGCTCGAAATAGAGCAGGAAGTCTCCAGCGTTGACTCTTCCTCTAACTCGACGCTCGGCCCGACGTTTAATACCCGTACTATTCAAAACGCCGTGCTGGTCAAAACCGGTGAAACGGTGGTCCTGGGCGGATTGCTGGATGATTTTTCTAAAGAGCAAGTGTCAAAGGTTCCTCTGCTTGGCGATATTCCTTTAGTGGGGCAACTCTTCCGCTATACCTCCACCGAGCGCGCTAAACGCAACCTGATGGTATTTATCCGTCCGACGATTATCCGTGACGATGATGTTTATCGCTCACTGTCAAAAGAGAAATACACCCGTTACCGTCAGGAGCAACAACAGCGGATCGACGGGAAATCAAAAGCGCTGGTTGGCTCGGAAGATTTGCCGGTGCTGGATGAAAACACGTTCAACAGTCACGCCCCTGCGCCATCGTCACGGTGA", + "dna_sequence_length": 1953, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3263", + "location": [ + [ + "NC_000913", + 3456377, + "+", + 1953 + ] + ], + "md5": "7047f313d519665c8b644059bc3db1f6", + "parent_gene": "", + "protein_md5": "fd03502796e8b79ee67e23e732b70b25", + "protein_translation": "MKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDPSVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADSSRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINKLIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRTNSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEKGNARKPSSSGAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKNVGAQQFTNTGLPIFNAAQGVADYKKNGGITSANPAWDMFSAYNGMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGDNVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDDDVYRSLSKEKYTRYRQEQQQRIDGKSKALVGSEDLPVLDENTFNSHAPAPSSR", + "protein_translation_length": 650, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010881" + ], + [ + "gene_synonym", + "ECK3313" + ], + [ + "gene_synonym", + "EcoGene:EG12891" + ], + [ + "gene_synonym", + "GI:16131205" + ], + [ + "gene_synonym", + "GeneID:947823" + ], + [ + "gene_synonym", + "JW3288" + ], + [ + "gene_synonym", + "NP_417785.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45759" + ], + [ + "gene_synonym", + "b3326" + ], + [ + "gene_synonym", + "gspE" + ], + [ + "gene_synonym", + "yheG" + ] + ], + "dna_sequence": "ATGAGAATTCACTCACCGTACCCCGCCAGTTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTGAGTCGCAACAGATTGCGCAGGATATCGATCAATCCGTCGATCTTCTCTCGCTTTCGGAAGAGATGCCCGCAAATGAAGATCTCCTGAATGAAGATTCAGCGGCACCGGTTATCCGCTTGATCAATGCGATTTTGAGTGAGGCCATCAAAGAAACCGCCTCTGATATCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCGCATCGACGGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGGCGGCACTGCTTATCTCCCGAATTAAGGTCATGGCTCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGTTTGCGTATCGGGCGACGTAACATAGATGTCCGCGTATCCACACTGCCGTCCATCTATGGTGAACGCGCCGTACTCCGCCTGCTGGATAAAAACAGCCTCCAGCTTTCATTGAACAACCTGGGGATGACGGCAGCGGATAAGCAGGATTTAGAAAATCTCATTCAGCTTCCGCACGGTATTATCCTGGTGACAGGGCCGACAGGCTCCGGTAAAAGCACCACGCTCTACGCCATCCTTTCGGCGCTGAATACTCCCGGCCGCAATATTCTGACGGTAGAAGATCCCGTGGAATATGAGCTGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCATCAGGCGCAGTGACCCGGCTCCGCGACATGGGCGTCGAATCATTCCTGCTTTCGTCTTCCCTGGCAGGGATTATCGCGCAACGTCTGGTTCGTCGCCTGTGTCCGCAATGCCGACAATTCACGCCCGTATCACCCCAACAAGCGCAGATGTTTAAATATCATCAGCTCGCGGTGACAACAATTGGCACTCCCGTAGGCTGCCCTCATTGCCATCAATCCGGCTATCAGGGGCGCATGGCGATCCACGAAATGATGGTGGTGACGCCGGAATTACGGGCCGCTATTCATGAAAATGTGGATGAACAAGCACTGGAGCGACTAGTCCGGCAACAACACAAGGCCTTAATCAAAAATGGCCTGCAAAAAGTGATAAGCGGTGACACCTCCTGGGATGAGGTTATGCGCGTCGCCAGTGCCACGCTGGAGAGCGAAGCATGA", + "dna_sequence_length": 1482, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3264", + "location": [ + [ + "NC_000913", + 3458339, + "+", + 1482 + ] + ], + "md5": "5b2594d876f6e2a880eb00a1c4f6dbed", + "parent_gene": "", + "protein_md5": "c25c5cdc75b23e024b013a0adda4365b", + "protein_translation": "MRIHSPYPASWALAQRIGYLYSEGEIIYLADTPFERLLDIQRQVGQCQTMTSLSQADFEARLEAVFHQNTGESQQIAQDIDQSVDLLSLSEEMPANEDLLNEDSAAPVIRLINAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLDIAEKRIPQDGRISLRIGRRNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAADKQDLENLIQLPHGIILVTGPTGSGKSTTLYAILSALNTPGRNILTVEDPVEYELEGIGQTQVNTRVDMSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTNSASGAVTRLRDMGVESFLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFKYHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQALERLVRQQHKALIKNGLQKVISGDTSWDEVMRVASATLESEA", + "protein_translation_length": 493, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010883" + ], + [ + "gene_synonym", + "ECK3314" + ], + [ + "gene_synonym", + "EcoGene:EG12885" + ], + [ + "gene_synonym", + "GI:16131206" + ], + [ + "gene_synonym", + "GeneID:947829" + ], + [ + "gene_synonym", + "JW3289" + ], + [ + "gene_synonym", + "NP_417786.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41441" + ], + [ + "gene_synonym", + "b3327" + ], + [ + "gene_synonym", + "gspF" + ], + [ + "gene_synonym", + "hofF" + ], + [ + "gene_synonym", + "hopF" + ] + ], + "dna_sequence": "ATGAATTATCGCTATCGCGCCATGACCCAGGATGGTCAAAAATTGCAAGGGATCATTGATGCTAACGATGAACGTCAGGCACGACTGCGGCTGCGTGAAGAAGGGCTTTTCCTGCTGGATATTCGCCCCCAAAAAAGTTCGGGAGTAAAAACACGTCGCCCGAGGATCAGCCATAGTGAACTGACGCTTTTCACCCGGCAGTTGGCAACCTTAAGCGCAGCGGCATTACCCCTGGAAGAGAGCCTTGCCGTAATCGGTCAACAAAGCAGTAATAAACGACTGGGTGACGTGTTAAATCAGGTACGCAGCGCCATCCTTGAAGGGCATCCCCTTTCCGATGCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGCGACACGTTGCAACGTACCGGCCCGACATTATTAGCGACAGTGTTTATTGTCGCTGTAGGTTTCTGGCTCTGGTTAAAACGCGGCAATAACCGCCACCGTTTTCATGCCATGTTGCTGCGCGTTGCGCTCATCGGCCCGCTGATTTGCGCCATTAACAGCGCACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCTGCTGGATGGGATGAATTTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGGTAACAGCATTCATCTTTCGCTGGAACAAACCGCAATTTTCCCGCCGATGATGCTCTACATGGTGGCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAA", + "dna_sequence_length": 1197, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3265", + "location": [ + [ + "NC_000913", + 3459817, + "+", + 1197 + ] + ], + "md5": "9cded691a74d245c6c48e47807c515da", + "parent_gene": "", + "protein_md5": "4cee4712a4c52a881886d4ad48ab1cde", + "protein_translation": "MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEESLAVIGQQSSNKRLGDVLNQVRSAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIGVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGNNRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010885" + ], + [ + "gene_synonym", + "ECK3315" + ], + [ + "gene_synonym", + "EcoGene:EG12886" + ], + [ + "gene_synonym", + "GI:16131207" + ], + [ + "gene_synonym", + "GeneID:947827" + ], + [ + "gene_synonym", + "JW3290" + ], + [ + "gene_synonym", + "NP_417787.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41442" + ], + [ + "gene_synonym", + "b3328" + ], + [ + "gene_synonym", + "gspG" + ], + [ + "gene_synonym", + "hofG" + ], + [ + "gene_synonym", + "hopG" + ] + ], + "dna_sequence": "ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTGATCGTCATTATCGGCGTACTTGCCAGCCTGGTGGTTCCTAACCTAATGGGCAATAAAGAAAAGGCGGATAAGCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTATGTCCTCGTTAATCCTGGTGAACATGGTGCATACGATCTGCTTTCAGCAGGGCCCGATGGTGAAATGGGAACCGAGGACGACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA", + "dna_sequence_length": 438, + "functions": [ + "pseudopilin, cryptic, general secretion pathway" + ], + "id": "CDS_3266", + "location": [ + [ + "NC_000913", + 3461023, + "+", + 438 + ] + ], + "md5": "f00201e29f9197dbc3190e012c90cd43", + "parent_gene": "", + "protein_md5": "c23d95a028b95cb251542d6b0d4378e5", + "protein_translation": "MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010888" + ], + [ + "gene_synonym", + "ECK3316" + ], + [ + "gene_synonym", + "EcoGene:EG12887" + ], + [ + "gene_synonym", + "GI:16131208" + ], + [ + "gene_synonym", + "GeneID:947834" + ], + [ + "gene_synonym", + "JW3291" + ], + [ + "gene_synonym", + "NP_417788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41443" + ], + [ + "gene_synonym", + "b3329" + ], + [ + "gene_synonym", + "gspH" + ], + [ + "gene_synonym", + "hofH" + ], + [ + "gene_synonym", + "hopH" + ] + ], + "dna_sequence": "ATGAATCAGCAACGCGGGTTTACCCTGCTGGAGATGATGCTGGTGCTGGCGCTGGTCGCTATCACGGCAAGCGTGGTGCTCTTCACATATGGCCGGGAGGATGTCGCCAGCACTCGTGCGCGCGAAACAGCGGCGCGGTTTACCGCTGCACTTGAATTAGCCATCGACCGCGCCACGCTCAGTGGTCAGCCTGTCGGTATCCATTTCTCTGATTCAGCATGGCGCATTATGGTACCGGGCAAAACACCATCAGCCTGGCGCTGGGTTCCATTACAAGAAGATGCCGCAGACGAGAGCCAAAATGACTGGGATGAAGAACTCTCAATTCATCTTCAGCCATTTAAACCTGATGACAGCAACCAGCCACAGGTTGTGATTCTGGCCGACGGACAAATCACGCCCTTCTCTTTGTTGATGGCTAACGCCGGGACCGGTGAGCCGCTCCTGACGTTAGTCTGTTCAGGCTCATGGCCCCTGGATCAAACGCTCGCCAGAGATACCCGCCCATGA", + "dna_sequence_length": 510, + "functions": [ + "putative general secretory pathway component, cryptic" + ], + "id": "CDS_3267", + "location": [ + [ + "NC_000913", + 3461468, + "+", + 510 + ] + ], + "md5": "fc18a75e1f3abab8fc77d0f1b1e41ef6", + "parent_gene": "", + "protein_md5": "268043c9390086e3cf73d8f78f697432", + "protein_translation": "MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010890" + ], + [ + "gene_synonym", + "ECK3317" + ], + [ + "gene_synonym", + "EcoGene:EG12892" + ], + [ + "gene_synonym", + "GI:90111570" + ], + [ + "gene_synonym", + "GeneID:947833" + ], + [ + "gene_synonym", + "JW5706" + ], + [ + "gene_synonym", + "NP_417789.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45760" + ], + [ + "gene_synonym", + "b3330" + ], + [ + "gene_synonym", + "gspI" + ], + [ + "gene_synonym", + "yheH" + ] + ], + "dna_sequence": "ATGAACAAACAATCAGGGATGACACTGCTTGAAGTCTTACTGGCGATGAGTATTTTCACCGCTGTTGCTCTGACTTTAATGAGCAGTATGCAAGGGCAACGAAATGCCATCGAGCGAATGCGTAACGAGACGCTGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAA", + "dna_sequence_length": 378, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3268", + "location": [ + [ + "NC_000913", + 3461974, + "+", + 378 + ] + ], + "md5": "89e946505c7da8e24833a0167e4e2def", + "parent_gene": "", + "protein_md5": "cf609f9af98bf77b57a32eda6a2cb6ec", + "protein_translation": "MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD", + "protein_translation_length": 125, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010892" + ], + [ + "gene_synonym", + "ECK3318" + ], + [ + "gene_synonym", + "EcoGene:EG12893" + ], + [ + "gene_synonym", + "GI:16131210" + ], + [ + "gene_synonym", + "GeneID:947832" + ], + [ + "gene_synonym", + "JW3293" + ], + [ + "gene_synonym", + "NP_417790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45761" + ], + [ + "gene_synonym", + "b3331" + ], + [ + "gene_synonym", + "gspJ" + ], + [ + "gene_synonym", + "yheI" + ] + ], + "dna_sequence": "ATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCACCATCACCATTCTTGATAACGATCTCCTGCAACTGGTCGCCCGGAGGAATCGGAGTACGGACAAAATCATGGTGTTGGGTGAAGAAGCTATTTTTACCACGCAAAGTCGCGATCCGCTGGCTCCTCTCAGTGAAGCACAAACCTTACTCACTGTTCACTGGTATCTGCGAAATCATACGCTCTACCGTGCTGTTCGTACTTCTGTGGATGGCAGGAAGGATCAACCCGCCCAGGCGATGCTGGAACATGTCGAGAGCTTTCTTCTGGAAAGTAACAGCGGGGAAAGCCAGGAACTTCCTCTCTCAGTCACGTTACATCTGCAGACTCAGCAATATGGGGGGTTACAGCGCCGTTTTGCATTACCTGAGCAGTTAGCGAGAGAAGAGTCGCCAGCTCAGACGCAGGCCGGGAATAATAACCATGAATAA", + "dna_sequence_length": 588, + "functions": [ + "putative general secretory pathway component, cryptic" + ], + "id": "CDS_3269", + "location": [ + [ + "NC_000913", + 3462344, + "+", + 588 + ] + ], + "md5": "66c252201038ef3067a2c34a47338479", + "parent_gene": "", + "protein_md5": "a2ec8e0d0f617aaedd14a57a2e74a2af", + "protein_translation": "MINRQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQLVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDGRKDQPAQAMLEHVESFLLESNSGESQELPLSVTLHLQTQQYGGLQRRFALPEQLAREESPAQTQAGNNNHE", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010894" + ], + [ + "gene_synonym", + "ECK3319" + ], + [ + "gene_synonym", + "EcoGene:EG12894" + ], + [ + "gene_synonym", + "GI:16131211" + ], + [ + "gene_synonym", + "GeneID:947831" + ], + [ + "gene_synonym", + "JW3294" + ], + [ + "gene_synonym", + "NP_417791.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45762" + ], + [ + "gene_synonym", + "b3332" + ], + [ + "gene_synonym", + "gspK" + ], + [ + "gene_synonym", + "yheJ" + ] + ], + "dna_sequence": "ATGAATAATGAACAACGCGGCGTCGCGCTGCTCATTGTACTCATGTTACTGGCGCTCATGGCTGCTCTGGCAGCAGACATGACGCTCAGTTTTCACAGCCAGCTTCAGCGAACCCGCCAGGTAAACCATCATCTGCAACGGCAATATGATATTGAACTGGCGGAGAAACTTGCGCTTGCCAGCCTCACCCAGGACGTTAAAGATAACGACAGACAGACCACGTTGCAGCAGTACTGGGCACAGCCACAACAGTTGCAGCTGGAAGATGGCAATACAGTGAAGTGGCAGTTACGCGATGCCCAGCACTGTTTTAATCTCAATGCGTTAGCAAAAATCTCTGACGACCCGCTGGCTTCCCCTGATTTCCCCGCCCAGGTATTCAGTGCGCTGCTGATTAACGCCGGTATCGATCGCGGAAACACCGATGAGATCGTGCAATCAATCGCTGACTATATTGATGTCGATGACTCACCACGCTTTCACGGCGCAGAAGATAGCTTTTACCAAAGCCAGACGCCGCCCCGGCATAGTGCCAATCAGATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAGGTGAAAAGGCATCTCTTTCCCTATAGCCGCTATTTTACGCTGAGTACGGAAAGTATCAGCGACGAACAATCCCAGGGATGGCAAAGCCATATTTTTTTCAACCGTAAACAGCAGAGCGCCCAAATCTATCGGCGTACGCTGCAACTCTACTAA", + "dna_sequence_length": 984, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3270", + "location": [ + [ + "NC_000913", + 3462924, + "+", + 984 + ] + ], + "md5": "a83bb5d7a8ba2d40d0fda5b761789d4d", + "parent_gene": "", + "protein_md5": "37ea5be6c58fc9d5adc2e50992d58182", + "protein_translation": "MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010896" + ], + [ + "gene_synonym", + "ECK3320" + ], + [ + "gene_synonym", + "EcoGene:EG12895" + ], + [ + "gene_synonym", + "GI:90111571" + ], + [ + "gene_synonym", + "GeneID:947842" + ], + [ + "gene_synonym", + "JW5705" + ], + [ + "gene_synonym", + "NP_417792.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45763" + ], + [ + "gene_synonym", + "b3333" + ], + [ + "gene_synonym", + "gspL" + ], + [ + "gene_synonym", + "yheK" + ] + ], + "dna_sequence": "ATGCCTGAATCGTTGATGGTCATACGTTCTTCCTCGACGCTGCGTAAGCATTGGGAATGGATGACGTTCTCCGCAGATAGCGTATCTTCGGTACATACGCTCACGGACGATCTTCCGCTGGAGTCGCTGGCCGATCAGCCCGGTGCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTTCTCGCCATTCTTTCTTTTGTTGGCAGCCGGAGCATCGCGCTCTGGCATACGCTTAAGATTGAAGATCAACTTCAGCAACAACAGCAAGAAACCTGGCAACGTTATTTCCCGCAGATCAAACGCACCCACAATTTTCGTTTTTACTTTAAGCAGCAACTCGCTCAGCAATATCCTGAAGCTGTGCCGTTGCTCTATCATTTACAAACACTTCTGCTGGAACACCCTGAACTGCAGTTAATGGAGGCGAACTATAGCCAGAAGCAAAAGTCGCTGACCTTAAAAATGAGTGCTAAGAGTGAAGCTAATATCGATCGTTTCTGTGAGTTAACACAGTCCTGGCTTCCGATGGAAAAAACAGAAAAAGATCCGGTCAGTGGTGTATGGACAGTAAGGAACTCAGGGAAATGA", + "dna_sequence_length": 1164, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3271", + "location": [ + [ + "NC_000913", + 3463922, + "+", + 1164 + ] + ], + "md5": "774d693824fc33515d647a66e5b95ca8", + "parent_gene": "", + "protein_md5": "bc63cb993d4fc125cf0565bfe89f0a2e", + "protein_translation": "MPESLMVIRSSSTLRKHWEWMTFSADSVSSVHTLTDDLPLESLADQPGAGNVHLLIPPEGLLYRSLTLPNAKYKLTAQTLQWLAEETLPDNTQDWHWTVVDKQNESVEVIGIQSEKLSRYLERLHTAGLNVTRVLPDGCYLPWEVDSWTLVNQQTSWLIRSAAHAFNELDEHWLQHLAAQFPPENMLCYGVVPHGVAAANPLIQHPEIPSLSLYSADIAFQRYDMLHGIFRKQKTVSKSGKWLARLAVSCLVLAILSFVGSRSIALWHTLKIEDQLQQQQQETWQRYFPQIKRTHNFRFYFKQQLAQQYPEAVPLLYHLQTLLLEHPELQLMEANYSQKQKSLTLKMSAKSEANIDRFCELTQSWLPMEKTEKDPVSGVWTVRNSGK", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010898" + ], + [ + "gene_synonym", + "ECK3321" + ], + [ + "gene_synonym", + "EcoGene:EG12173" + ], + [ + "gene_synonym", + "GI:90111572" + ], + [ + "gene_synonym", + "GeneID:947841" + ], + [ + "gene_synonym", + "JW5704" + ], + [ + "gene_synonym", + "NP_417793.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36678" + ], + [ + "gene_synonym", + "b3334" + ], + [ + "gene_synonym", + "gspM" + ], + [ + "gene_synonym", + "hopZ" + ], + [ + "gene_synonym", + "pshM" + ] + ], + "dna_sequence": "ATGATTAAATCATGGTGGGCAGAAAAATCCACATCGGAAAAACAGATCGTTGCGGCACTGGCGGTTCTCTCGCTCGGCGTTTTTTGTTGGCTTGGGGTGATAAAACCGATAGATACCTACATTGCAGAGCATCAGTCCCACGCGCAAAAAATTAAGAAGGACATCAAATGGATGCAGGATCAAGCGAGCACCCATGGTTTACTCGGTCATCCTGCGCTTACGCAGCCCATCAAAAATATCCTTCTCGAGGAAGCAAAACGTGAGAATTTGGCTATCACGCTGGAAAACGGCCCGGACAATACTCTGACAATTCATCCTGTCACAGCTCCCCTCGAAAACGTCTCCCGCTGGCTCACTACGGCACAGGTAACATACGGTATTGTTATTGAAGACCTTCAGTTTACTCTTGCCGGAAACGAAGAGATCACCCTCAGGCATTTGTCCTTCAGGGAGCAACAATAA", + "dna_sequence_length": 462, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3272", + "location": [ + [ + "NC_000913", + 3465082, + "+", + 462 + ] + ], + "md5": "c4c097985c226b1641f6d8a26fed678e", + "parent_gene": "", + "protein_md5": "e0cfeb5e390632c70f5684527b5f0475", + "protein_translation": "MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLGVIKPIDTYIAEHQSHAQKIKKDIKWMQDQASTHGLLGHPALTQPIKNILLEEAKRENLAITLENGPDNTLTIHPVTAPLENVSRWLTTAQVTYGIVIEDLQFTLAGNEEITLRHLSFREQQ", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010901" + ], + [ + "gene_synonym", + "ECK3322" + ], + [ + "gene_synonym", + "EcoGene:EG11359" + ], + [ + "gene_synonym", + "GI:16131214" + ], + [ + "gene_synonym", + "GeneID:947840" + ], + [ + "gene_synonym", + "JW3297" + ], + [ + "gene_synonym", + "NP_417794.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25960" + ], + [ + "gene_synonym", + "b3335" + ], + [ + "gene_synonym", + "gspO" + ], + [ + "gene_synonym", + "hofD" + ], + [ + "gene_synonym", + "hopD" + ], + [ + "gene_synonym", + "hopO" + ], + [ + "gene_synonym", + "yheC" + ] + ], + "dna_sequence": "ATGACAATGCTACTGCCGCTCTTCATTCTGGTTGGTTTTATTGCAGATTATTTTGTTAATGCCATCGCCTATCACCTCTCGCCGTTGGAGGATAAAACGGCGTTAACGTTTCGCCAGGTATTGGTTCATTTCAGGCAAAAAAAATATGCCTGGCATGATACAGTGCCCCTGATACTTTGTGTTGCTGCTGCTATCGCCTGCGCCCTGGCACCTTTCACGCCCATCGTGACTGGCGCACTCTTTCTCTATTTCTGTTTCGTACTCACGCTCAGTGTTATTGATTTTCGCACTCAGCTCCTGCCCGACAAACTCACCTTACCGCTGCTCTGGCTTGGCTTGGTATTTAATGCGCAGTATGGATTAATTGATTTACATGATGCGGTTTACGGCGCGGTAGCGGGCTATGGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAACGCCGGACTATAACCACTATCGCATTCGGCCCGTGGCTTGCGCTCGGCAGCATGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAA", + "dna_sequence_length": 678, + "functions": [ + "bifunctional prepilin leader peptidase/ methylase" + ], + "id": "CDS_3273", + "location": [ + [ + "NC_000913", + 3465543, + "+", + 678 + ] + ], + "md5": "403fcc3b8ceda2226144cb549a53494f", + "parent_gene": "", + "protein_md5": "160cb216dbef65beca93c87be384bc60", + "protein_translation": "MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010903" + ], + [ + "gene_synonym", + "ECK3323" + ], + [ + "gene_synonym", + "EcoGene:EG10113" + ], + [ + "gene_synonym", + "GI:16131215" + ], + [ + "gene_synonym", + "GeneID:947839" + ], + [ + "gene_synonym", + "JW3298" + ], + [ + "gene_synonym", + "NP_417795.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD3" + ], + [ + "gene_synonym", + "b3336" + ], + [ + "gene_synonym", + "bfr" + ] + ], + "dna_sequence": "ATGAAAGGTGATACTAAAGTTATAAATTATCTCAACAAACTGTTGGGAAATGAGCTTGTCGCAATCAATCAGTACTTTCTCCATGCCCGAATGTTTAAAAACTGGGGTCTCAAACGTCTCAATGATGTGGAGTATCATGAATCCATTGATGAGATGAAACACGCCGATCGTTATATTGAGCGCATTCTTTTTCTGGAAGGTCTTCCAAACTTACAGGACCTGGGCAAACTGAACATTGGTGAAGATGTTGAGGAAATGCTGCGTTCTGATCTGGCACTTGAGCTGGATGGCGCGAAGAATTTGCGTGAGGCAATTGGTTATGCCGATAGCGTTCATGATTACGTCAGCCGCGATATGATGATAGAAATTTTGCGTGATGAAGAAGGCCATATCGACTGGCTGGAAACGGAACTTGATCTGATTCAGAAGATGGGCCTGCAAAATTATCTGCAAGCACAGATCCGCGAAGAAGGTTGA", + "dna_sequence_length": 477, + "functions": [ + "bacterioferritin, iron storage and detoxification protein" + ], + "id": "CDS_3274", + "location": [ + [ + "NC_000913", + 3466725, + "-", + 477 + ] + ], + "md5": "b6840aca2665190a8f38b652b7becf0a", + "parent_gene": "", + "protein_md5": "41794e2f15274aa8e594ce47f97a857d", + "protein_translation": "MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010906" + ], + [ + "gene_synonym", + "ECK3324" + ], + [ + "gene_synonym", + "EcoGene:EG11181" + ], + [ + "gene_synonym", + "GI:16131216" + ], + [ + "gene_synonym", + "GeneID:947836" + ], + [ + "gene_synonym", + "JW3299" + ], + [ + "gene_synonym", + "NP_417796.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE56" + ], + [ + "gene_synonym", + "b3337" + ], + [ + "gene_synonym", + "bfd" + ], + [ + "gene_synonym", + "yheA" + ] + ], + "dna_sequence": "ATGTACGTTTGTCTTTGTAATGGTATCAGCGATAAAAAAATTCGTCAGGCTGTGCGCCAGTTTTCCCCTCACTCGTTCCAGCAATTAAAAAAATTTATTCCGGTCGGCAATCAGTGCGGTAAATGTGTCCGGGCCGCGCGTGAAGTGATGGAGGATGAATTAATGCAGCTGCCGGAGTTTAAGGAGTCCGCATAA", + "dna_sequence_length": 195, + "functions": [ + "bacterioferritin-associated ferredoxin" + ], + "id": "CDS_3275", + "location": [ + [ + "NC_000913", + 3466991, + "-", + 195 + ] + ], + "md5": "541f02820c779ec2f478fe185cacd1b0", + "parent_gene": "", + "protein_md5": "f7eedf512dcd2ecef19d0652fbafd476", + "protein_translation": "MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVRAAREVMEDELMQLPEFKESA", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010909" + ], + [ + "gene_synonym", + "ECK3325" + ], + [ + "gene_synonym", + "EcoGene:EG11237" + ], + [ + "gene_synonym", + "GI:16131217" + ], + [ + "gene_synonym", + "GeneID:947837" + ], + [ + "gene_synonym", + "JW3300" + ], + [ + "gene_synonym", + "NP_417797.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13656" + ], + [ + "gene_synonym", + "b3338" + ], + [ + "gene_synonym", + "chiA" + ], + [ + "gene_synonym", + "yheB" + ] + ], + "dna_sequence": "ATGAAATTAAATATATTTACTAAATCTATGATTGGTATGGGGCTGGTGTGTTCCGCTCTGCCAGCATTGGCAATGGAAGCATGGAATAACCAACAAGGTGGTAATAAATATCAGGTTATTTTCGATGGCAAAATTTATGAAAATGCCTGGTGGGTTTCTTCTACAAATTGCCCGGGAAAAGCGAAAGCAAATGATGCAACTAACCCGTGGCGTTTAAAGCGTACCGCAACAGCTGCTGAAATTAGTCAGTTTGGCAATACACTTTCCTGCGAAAAGAGCGGCAGCTCATCTTCTTCAAATTCAAATACGCCTGCATCCAATACGCCGGCTAATGGCGGTTCGGCTACACCAGCACAGGGCACTGTTCCGTCTAATTCTTCTGTAGTTGCCTGGAATAAACAGCAGGGCGGTCAGACCTGGTATGTCGTCTTTAATGGTGCGGTATATAAAAATGCCTGGTGGGTAGCCTCTTCTAACTGTCCGGGTGATGCGAAAAGCAATGATGCCAGCAACCCATGGCGTTATGTTCGTGCCGCTACGGCAACGGAAATCTCAGAAACCAGTAATCCACAGTCCTGTACTTCAGCACCACAGCCTTCACCGGATGTGAAACCGGCACCGGACGTTAAACCGGCTCCTGATGTTCAGCCAGCCCCAGCTGATAAGTCAAACGACAACTATGCTGTAGTAGCCTGGAAAGGTCAGGAAGGTTCTTCTACATGGTACGTTATCTATAACGGCGGCATTTATAAGAACGCCTGGTGGGTAGGCGCGGCAAATTGCCCAGGCGATGCGAAAGAAAACGATGCCAGTAACCCATGGCGTTATGTTCGCGCGGCAACGGCAACAGAAATCAGCCAGTATGGTAACCCTGGCTCCTGTTCCGTTAAGCCGGATAATAATGGCGGTGCTGTGACTCCGGTTGATCCAACTCCGGAAACACCGGTGACCCCAACTCCGGATAACAGCGAGCCATCAACACCAGCGGATAGCGTTAACGATTACTCATTGCAAGCGTGGAGCGGCCAGGAAGGTAGCGAAATTTACCATGTTATTTTCAATGGTAATGTTTACAAGAACGCCTGGTGGGTTGGGTCTAAAGATTGCCCACGGGGTACCAGCGCTGAAAACTCCAATAACCCATGGCGTCTCGAGCGTACAGCTACCGCTGCGGAATTGAGTCAGTACGGTAACCCGACTACCTGTGAAATTGATAACGGCGGCGTCATTGTTGCGGATGGTTTCCAGGCCAGCAAAGCGTACAGCGCGGACAGCATCGTAGATTATAACGATGCACATTATAAAACTTCTGTCGATCAAGACGCATGGGGCTTTGTCCCGGGCGGCGATAACCCGTGGAAGAAATACGAACCGGCGAAAGCATGGTCCGCATCCACTGTGTACGTGAAAGGTGATCGCGTTGTTGTTGATGGGCAGGCTTATGAAGCGCTGTTCTGGACGCAAAGTGACAACCCTGCTCTGGTGGCGAACCAAAACGCCACCGGTAGCAATAGCCGCCCGTGGAAGCCGTTAGGTAAGGCTCAGAGCTATAGCAACGAAGAGCTGAATAATGCGCCGCAGTTTAATCCAGAAACGCTTTATGCCAGCGATACGCTGATTCGCTTTAACGGTGTGAACTACATTTCTCAGAGTAAAGTGCAGAAAGTTTCTCCTTCTGACAGCAACCCGTGGCGTGTTTTTGTTGACTGGACCGGAACCAAAGAGCGCGTAGGTACGCCGAAGAAAGCGTGGCCGAAACACGTTTATGCACCGTATGTCGACTTTACGCTGAATACGATCCCGGATCTGGCTGCGCTGGCTAAGAATCATAACGTCAACCACTTCACGCTGGCGTTTGTGGTGAGTAAAGATGCGAACACCTGTCTGCCGACATGGGGTACCGCTTACGGTATGCAGAATTACGCTCAGTACAGCAAAATCAAAGCTCTGCGTGAGGCTGGCGGCGATGTGATGCTGTCTATCGGTGGTGCTAACAACGCTCCGCTGGCTGCTTCCTGTAAGAACGTAGACGATCTGATGCAGCATTATTATGACATCGTTGATAACCTGAACCTCAAAGTCCTGGACTTCGATATCGAAGGCACCTGGGTTGCGGATCAGGCATCTATTGAACGTCGTAACCTTGCTGTGAAGAAAGTGCAGGATAAATGGAAGTCAGAAGGCAAAGATATTGCTATCTGGTACACCTTGCCAATTCTGCCGACTGGCCTGACGCCGGAAGGGATGAATGTCCTGAGCGATGCCAAAGCGAAAGGTGTTGAGCTGGCGGGTGTGAACGTGATGACAATGGACTACGGTAACGCGATTTGTCAGTCTGCAAATACCGAAGGCCAGAACATTCACGGTAAGTGTGCAACGTCTGCGATTGCCAACCTGCATTCACAATTGAAAGGCCTCCATCCCAATAAGAGCGATGCAGAAATTGACGCTATGATGGGTACCACGCCGATGGTTGGCGTGAACGACGTTCAGGGCGAGGTGTTCTATCTCTCTGATGCTCGTCTGGTCATGCAGGATGCGCAGAAGCGTAATCTCGGTATGGTTGGTATCTGGTCAATCGCGCGCGACCTGCCGGGCGGCACTAACCTGTCTCCGGAATTCCACGGCCTGACTAAAGAACAGGCACCGAAGTACGCATTTAGCGAAATCTTCGCGCCGTTTACTAAGCAATAA", + "dna_sequence_length": 2694, + "functions": [ + "periplasmic endochitinase" + ], + "id": "CDS_3276", + "location": [ + [ + "NC_000913", + 3469853, + "-", + 2694 + ] + ], + "md5": "7aaca0980c6e9410caac7a927c5ccf43", + "parent_gene": "", + "protein_md5": "f70fafe912a9c7b1d8b014bc14d588e1", + "protein_translation": "MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNCPGDAKSNDASNPWRYVRAATATEISETSNPQSCTSAPQPSPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSSTWYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTPDNSEPSTPADSVNDYSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPTTCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQAYEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLKVLDFDIEGTWVADQASIERRNLAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ", + "protein_translation_length": 897, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010912" + ], + [ + "gene_synonym", + "ECK3326" + ], + [ + "gene_synonym", + "EcoGene:EG11036" + ], + [ + "gene_synonym", + "GI:16131218" + ], + [ + "gene_synonym", + "GeneID:947838" + ], + [ + "gene_synonym", + "JW3301" + ], + [ + "gene_synonym", + "NP_417798.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE47" + ], + [ + "gene_synonym", + "b3339" + ], + [ + "gene_synonym", + "kirT" + ], + [ + "gene_synonym", + "pulT" + ], + [ + "gene_synonym", + "tufA" + ] + ], + "dna_sequence": "GTGTCTAAAGAAAAATTTGAACGTACAAAACCGCACGTTAACGTTGGTACTATCGGCCACGTTGACCACGGTAAAACTACTCTGACCGCTGCAATCACCACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACATGGTTGATGACGAAGAGCTGCTGGAACTGGTTGAAATGGAAGTTCGTGAACTTCTGTCTCAGTACGACTTCCCGGGCGACGACACTCCGATCGTTCGTGGTTCTGCTCTGAAAGCGCTGGAAGGCGACGCAGAGTGGGAAGCGAAAATCCTGGAACTGGCTGGCTTCCTGGATTCTTATATTCCGGAACCAGAGCGTGCGATTGACAAGCCGTTCCTGCTGCCGATCGAAGACGTATTCTCCATCTCCGGTCGTGGTACCGTTGTTACCGGTCGTGTAGAACGCGGTATCATCAAAGTTGGTGAAGAAGTTGAAATCGTTGGTATCAAAGAGACTCAGAAGTCTACCTGTACTGGCGTTGAAATGTTCCGCAAACTGCTGGACGAAGGCCGTGCTGGTGAGAACGTAGGTGTTCTGCTGCGTGGTATCAAACGTGAAGAAATCGAACGTGGTCAGGTACTGGCTAAGCCGGGCACCATCAAGCCGCACACCAAGTTCGAATCTGAAGTGTACATTCTGTCCAAAGATGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGATCGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTTGCTAAAGTTCTGGGCTAA", + "dna_sequence_length": 1185, + "functions": [ + "translation elongation factor EF-Tu 1" + ], + "id": "CDS_3277", + "location": [ + [ + "NC_000913", + 3471329, + "-", + 1185 + ] + ], + "md5": "296ef1f3173b8a9b4bd2000d0802352f", + "parent_gene": "", + "protein_md5": "3ba5ec971eda5dc5f5c1c093a5df4e11", + "protein_translation": "MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010914" + ], + [ + "gene_synonym", + "ECK3327" + ], + [ + "gene_synonym", + "EcoGene:EG10360" + ], + [ + "gene_synonym", + "GI:16131219" + ], + [ + "gene_synonym", + "GeneID:947847" + ], + [ + "gene_synonym", + "JW3302" + ], + [ + "gene_synonym", + "NP_417799.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6M8" + ], + [ + "gene_synonym", + "b3340" + ], + [ + "gene_synonym", + "far" + ], + [ + "gene_synonym", + "fus" + ], + [ + "gene_synonym", + "fusA" + ] + ], + "dna_sequence": "ATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCTGTTCTACACCGGTGTAAACCATAAAATCGGTGAAGTTCATGACGGCGCTGCAACCATGGACTGGATGGAGCAGGAGCAGGAACGTGGTATTACCATCACTTCCGCTGCGACTACTGCATTCTGGTCTGGTATGGCTAAGCAGTATGAGCCGCATCGCATCAACATCATCGACACCCCGGGGCACGTTGACTTCACAATCGAAGTAGAACGTTCCATGCGTGTTCTCGATGGTGCGGTAATGGTTTACTGCGCAGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAGGCAAACAAATATAAAGTTCCGCGCATTGCGTTCGTTAACAAAATGGACCGCATGGGTGCGAACTTCCTGAAAGTTGTTAACCAGATCAAAACCCGTCTGGGCGCGAACCCGGTTCCGCTGCAGCTGGCGATTGGTGCTGAAGAACATTTCACCGGTGTTGTTGACCTGGTGAAAATGAAAGCTATCAACTGGAACGACGCTGACCAGGGCGTAACCTTCGAATACGAAGATATCCCGGCAGACATGGTTGAACTGGCTAACGAATGGCACCAGAACCTGATCGAATCCGCAGCTGAAGCTTCTGAAGAGCTGATGGAAAAATACCTGGGTGGTGAAGAACTGACTGAAGCAGAAATCAAAGGTGCTCTGCGTCAGCGCGTTCTGAACAACGAAATCATCCTGGTAACCTGTGGTTCTGCGTTCAAGAACAAAGGTGTTCAGGCGATGCTGGATGCGGTAATTGATTACCTGCCATCCCCGGTTGACGTACCTGCGATCAACGGTATCCTGGACGACGGTAAAGACACTCCGGCTGAACGTCACGCAAGTGATGACGAGCCGTTCTCTGCACTGGCGTTCAAAATCGCTACCGACCCGTTTGTTGGTAACCTGACCTTCTTCCGTGTTTACTCCGGTGTGGTTAACTCTGGTGATACCGTACTGAACTCCGTGAAAGCTGCACGTGAGCGTTTCGGTCGTATCGTTCAGATGCACGCTAACAAACGTGAAGAGATCAAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGGTGGTCGTGGTCAGTATGGTCATGTTGTTATCGACATGTACCCGCTGGAGCCGGGTTCAAACCCGAAAGGCTACGAGTTCATCAACGACATTAAAGGTGGTGTAATCCCTGGCGAATACATCCCGGCCGTTGATAAAGGTATCCAGGAACAGCTGAAAGCAGGTCCGCTGGCAGGCTACCCGGTAGTAGACATGGGTATTCGTCTGCACTTCGGTTCTTACCATGACGTTGACTCCTCTGAACTGGCGTTTAAACTGGCTGCTTCTATCGCCTTTAAAGAAGGCTTTAAGAAAGCGAAACCAGTTCTGCTTGAGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACCGGTGACGTTATCGGTGACTTGAGCCGTCGTCGTGGTATGCTCAAAGGTCAGGAATCTGAAGTTACTGGCGTTAAGATCCACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTGGTAAATAA", + "dna_sequence_length": 2115, + "functions": [ + "protein chain elongation factor EF-G, GTP-binding" + ], + "id": "CDS_3278", + "location": [ + [ + "NC_000913", + 3473514, + "-", + 2115 + ] + ], + "md5": "2f459b9066ba4e69be780d9a41b2d368", + "parent_gene": "", + "protein_md5": "5ed92216217cffcadf103a2d101359d4", + "protein_translation": "MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK", + "protein_translation_length": 704, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010917" + ], + [ + "gene_synonym", + "ECK3328" + ], + [ + "gene_synonym", + "EcoGene:EG10906" + ], + [ + "gene_synonym", + "GI:16131220" + ], + [ + "gene_synonym", + "GeneID:947846" + ], + [ + "gene_synonym", + "JW3303" + ], + [ + "gene_synonym", + "NP_417800.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02359" + ], + [ + "gene_synonym", + "b3341" + ], + [ + "gene_synonym", + "rpsG" + ] + ], + "dna_sequence": "ATGCCACGTCGTCGCGTCATTGGTCAGCGTAAAATTCTGCCGGATCCGAAGTTCGGATCAGAACTGCTGGCTAAATTTGTAAATATCCTGATGGTAGATGGTAAAAAATCTACTGCTGAATCTATCGTATACAGCGCGCTGGAGACCCTGGCTCAGCGCTCTGGTAAATCTGAACTGGAAGCATTCGAAGTAGCTCTCGAAAACGTGCGCCCGACTGTAGAAGTTAAGTCTCGCCGCGTTGGTGGTTCTACTTATCAGGTACCAGTTGAAGTCCGTCCGGTTCGTCGTAATGCTCTGGCAATGCGTTGGATCGTTGAAGCTGCTCGTAAACGCGGTGATAAATCCATGGCTCTGCGCCTGGCGAACGAACTTTCTGATGCTGCAGAAAACAAAGGTACTGCAGTTAAGAAACGTGAAGACGTTCACCGTATGGCCGAAGCCAACAAGGCGTTCGCACACTACCGTTGGTTATCCCTTCGGAGTTTTAGTCACCAGGCGGGCGCTTCCAGTAAGCAGCCCGCTTTGGGCTACTTAAATTGA", + "dna_sequence_length": 540, + "functions": [ + "30S ribosomal subunit protein S7" + ], + "id": "CDS_3279", + "location": [ + [ + "NC_000913", + 3474081, + "-", + 540 + ] + ], + "md5": "50f324d9a9b2096853f52b067a66a9d8", + "parent_gene": "", + "protein_md5": "e6c4cdddb12f6fb632e0d7a24acabdd7", + "protein_translation": "MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRSFSHQAGASSKQPALGYLN", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010919" + ], + [ + "gene_synonym", + "ECK3329" + ], + [ + "gene_synonym", + "EcoGene:EG10911" + ], + [ + "gene_synonym", + "GI:16131221" + ], + [ + "gene_synonym", + "GeneID:947845" + ], + [ + "gene_synonym", + "JW3304" + ], + [ + "gene_synonym", + "NP_417801.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7S3" + ], + [ + "gene_synonym", + "asuB" + ], + [ + "gene_synonym", + "b3342" + ], + [ + "gene_synonym", + "rpsL" + ], + [ + "gene_synonym", + "strA" + ] + ], + "dna_sequence": "ATGGCAACAGTTAACCAGCTGGTACGCAAACCACGTGCTCGCAAAGTTGCGAAAAGCAACGTGCCTGCGCTGGAAGCATGCCCGCAAAAACGTGGCGTATGTACTCGTGTATATACTACCACTCCTAAAAAACCGAACTCCGCGCTGCGTAAAGTATGCCGTGTTCGTCTGACTAACGGTTTCGAAGTGACTTCCTACATCGGTGGTGAAGGTCACAACCTGCAGGAGCACTCCGTGATCCTGATCCGTGGCGGTCGTGTTAAAGACCTCCCGGGTGTTCGTTACCACACCGTACGTGGTGCGCTTGACTGCTCCGGCGTTAAAGACCGTAAGCAGGCTCGTTCCAAGTATGGCGTGAAGCGTCCTAAGGCTTAA", + "dna_sequence_length": 375, + "functions": [ + "30S ribosomal subunit protein S12" + ], + "id": "CDS_3280", + "location": [ + [ + "NC_000913", + 3474552, + "-", + 375 + ] + ], + "md5": "2aa2ce4796cec2aed2290a51ccd84e07", + "parent_gene": "", + "protein_md5": "29495e0d2573e3eb61572cc610d4e48b", + "protein_translation": "MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010922" + ], + [ + "gene_synonym", + "ECK3330" + ], + [ + "gene_synonym", + "EcoGene:EG12896" + ], + [ + "gene_synonym", + "GI:16131222" + ], + [ + "gene_synonym", + "GeneID:947844" + ], + [ + "gene_synonym", + "JW3305" + ], + [ + "gene_synonym", + "NP_417802.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45530" + ], + [ + "gene_synonym", + "b3343" + ], + [ + "gene_synonym", + "tusB" + ], + [ + "gene_synonym", + "yheL" + ] + ], + "dna_sequence": "ATGCTGCACACATTACATCGCTCACCCTGGCTGACGGATTTTGCTGCGCTGCTGCGTCTGCTCAGTGAAGGAGACGAACTGCTATTATTGCAAGATGGCGTAACTGCCGCAGTTGACGGTAACCGCTACCTTGAAAGTCTGCGTAATGCCCCCATTAAGGTCTATGCCCTGAACGAAGACCTTATTGCCCGCGGTTTGACTGGTCAAATTTCGAACGACATCATTCTCATTGACTATACTGATTTCGTCAGACTTACGGTTAAGCACCCCAGCCAGATGGCCTGGTGA", + "dna_sequence_length": 288, + "functions": [ + "mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" + ], + "id": "CDS_3281", + "location": [ + [ + "NC_000913", + 3474965, + "-", + 288 + ] + ], + "md5": "3cfbf995b4538e7192244868811243a3", + "parent_gene": "", + "protein_md5": "8d6026b6d86adee3567a335247e6539d", + "protein_translation": "MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYLESLRNAPIKVYALNEDLIARGLTGQISNDIILIDYTDFVRLTVKHPSQMAW", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010928" + ], + [ + "gene_synonym", + "ECK3331" + ], + [ + "gene_synonym", + "EcoGene:EG12897" + ], + [ + "gene_synonym", + "GI:16131223" + ], + [ + "gene_synonym", + "GeneID:947853" + ], + [ + "gene_synonym", + "JW3306" + ], + [ + "gene_synonym", + "NP_417803.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45531" + ], + [ + "gene_synonym", + "b3344" + ], + [ + "gene_synonym", + "tusC" + ], + [ + "gene_synonym", + "yheM" + ] + ], + "dna_sequence": "ATGAAACGAATTGCGTTTGTTTTTTCTACTGCACCTCATGGTACAGCCGCAGGCCGGGAAGGTTTAGATGCTTTACTGGCAACTTCCGCATTAACTGACGATCTGGCTGTCTTCTTTATAGCTGATGGCGTTTTTCAGCTGCTGCCAGGACAAAAGCCCGATGCAGTGCTGGCGCGTGATTACATTGCCACTTTTAAATTGTTGGGTCTGTACGACATTGAACAGTGCTGGGTTTGTGCGGCTTCACTGCGCGAACGCGGGTTAGATCCGCAGACACCCTTTGTTGTCGAAGCCACGCCGCTCGAAGCAGATGCCTTACGCCGCGAACTCGCCAACTACGATGTTATTTTGAGGTTTTGA", + "dna_sequence_length": 360, + "functions": [ + "mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" + ], + "id": "CDS_3282", + "location": [ + [ + "NC_000913", + 3475332, + "-", + 360 + ] + ], + "md5": "eac6e9c813a3508329d2e5db80208a57", + "parent_gene": "", + "protein_md5": "b9e7f5387777af7bb242027636c4dd41", + "protein_translation": "MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010933" + ], + [ + "gene_synonym", + "ECK3332" + ], + [ + "gene_synonym", + "EcoGene:EG12898" + ], + [ + "gene_synonym", + "GI:16131224" + ], + [ + "gene_synonym", + "GeneID:947852" + ], + [ + "gene_synonym", + "JW3307" + ], + [ + "gene_synonym", + "NP_417804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45532" + ], + [ + "gene_synonym", + "b3345" + ], + [ + "gene_synonym", + "tusD" + ], + [ + "gene_synonym", + "yheN" + ] + ], + "dna_sequence": "ATGCGTTTTGCCATCGTGGTGACCGGGCCAGCATACGGTACGCAACAGGCGAGTAGTGCTTTTCAGTTTGCGCAGGCGCTGATAGCAGATGGCCATGAGTTAAGCAGCGTCTTTTTCTATCGGGAAGGGGTCTATAACGCTAACCAATTGACCTCTCCGGCAAGTGACGAATTTGACCTCGTACGGGCCTGGCAACAACTGAATGCGCAACATGGTGTGGCGCTGAATATCTGCGTAGCGGCAGCATTACGCCGTGGCGTTGTTGATGAAACGGAGGCCGGAAGACTGGGGCTGGCTTCGTCAAACCTTCAGCAGGGATTTACCTTAAGCGGACTTGGGGCGCTGGCGGAAGCCTCGCTGACCTGTGACAGGGTGGTACAGTTCTGA", + "dna_sequence_length": 387, + "functions": [ + "sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis" + ], + "id": "CDS_3283", + "location": [ + [ + "NC_000913", + 3475718, + "-", + 387 + ] + ], + "md5": "f35d205b78cf12ff6aba1ec2f0a7366a", + "parent_gene": "", + "protein_md5": "832ff651a910cda1590a0fc26ef4aba5", + "protein_translation": "MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTLSGLGALAEASLTCDRVVQF", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010936" + ], + [ + "gene_synonym", + "ECK3333" + ], + [ + "gene_synonym", + "EcoGene:EG12899" + ], + [ + "gene_synonym", + "GI:90111573" + ], + [ + "gene_synonym", + "GeneID:947851" + ], + [ + "gene_synonym", + "JW5703" + ], + [ + "gene_synonym", + "NP_417805.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64624" + ], + [ + "gene_synonym", + "b3346" + ], + [ + "gene_synonym", + "yheO" + ] + ], + "dna_sequence": "ATGTCCAGGTCGCTTTTAACCAACGAAACCAGTGAGTTGGATTTACTGGATCAACGTCCTTTCGACCAGACCGATTTTGATATTCTGAAATCCTACGAAGCGGTGGTGGACGGGTTAGCGATGCTTATTGGCTCCCACTGTGAAATCGTTTTGCACTCTTTGCAGGATCTAAAATGTTCAGCCATTCGCATTGCTAACGGTGAACATACAGGCCGGAAGATTGGTTCGCCAATTACTGACCTGGCGCTACGTATGCTGCACGATATGACGGGAGCGGATAGCAGCGTTTCTAAATGCTACTTTACTCGCGCCAAAAGCGGCGTATTAATGAAGTCCCTGACTATCGCGATTCGTAACCGCGAACAGCGTGTAATTGGTCTGCTGTGCATCAATATGAATCTTGATGTTCCCTTCTCGCAGATTATGAGCACCTTTGTGCCGCCAGAAACCCCGGATGTCGGTTCAAGCGTCAACTTTGCCTCTTCTGTTGAAGATCTGGTTACCCAAACGCTGGAGTTCACCATCGAAGAAGTGAATGCCGATCGCAATGTTTCTAATAACGCCAAAAATCGTCAGATCGTGCTGAATCTCTACGAGAAAGGGATCTTCGATATTAAAGATGCGATCAACCAGGTTGCTGACCGCCTGAACATCTCCAAACACACTGTCTATCTCTACATCCGCCAGTTCAAGAGCGGTGATTTCCAGGGGCAAGATAAGTAA", + "dna_sequence_length": 723, + "functions": [ + "putative PAS domain-containing DNA-binding transcriptional regulator" + ], + "id": "CDS_3284", + "location": [ + [ + "NC_000913", + 3476440, + "-", + 723 + ] + ], + "md5": "2fc905f490aa545561a6ea2e74b3fad2", + "parent_gene": "", + "protein_md5": "ef1fc8010739057d521c2c08f6fa32f9", + "protein_translation": "MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010938" + ], + [ + "gene_synonym", + "ECK3334" + ], + [ + "gene_synonym", + "EcoGene:EG12900" + ], + [ + "gene_synonym", + "GI:16131226" + ], + [ + "gene_synonym", + "GeneID:947850" + ], + [ + "gene_synonym", + "JW3309" + ], + [ + "gene_synonym", + "NP_417806.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45523" + ], + [ + "gene_synonym", + "b3347" + ], + [ + "gene_synonym", + "fkpA" + ], + [ + "gene_synonym", + "yzzS" + ] + ], + "dna_sequence": "ATGAAATCACTGTTTAAAGTAACGCTGCTGGCGACCACAATGGCCGTTGCCCTGCATGCACCAATCACTTTTGCTGCTGAAGCTGCAAAACCTGCTACAGCTGCTGACAGCAAAGCAGCGTTCAAAAATGACGATCAGAAATCAGCTTATGCACTGGGTGCCTCGCTGGGTCGTTACATGGAAAACTCTCTAAAAGAACAAGAAAAACTGGGCATCAAACTGGATAAAGATCAGCTGATCGCTGGTGTTCAGGATGCATTTGCTGATAAGAGCAAACTCTCCGACCAAGAGATCGAACAGACTCTACAAGCATTCGAAGCTCGCGTGAAGTCTTCTGCTCAGGCGAAGATGGAAAAAGACGCGGCTGATAACGAAGCAAAAGGTAAAGAGTACCGCGAGAAATTTGCCAAAGAGAAAGGTGTGAAAACCTCTTCAACTGGTCTGGTTTATCAGGTAGTAGAAGCCGGTAAAGGCGAAGCACCGAAAGACAGCGATACTGTTGTAGTGAACTACAAAGGTACGCTGATCGACGGTAAAGAGTTCGACAACTCTTACACCCGTGGTGAACCGCTTTCTTTCCGTCTGGACGGTGTTATCCCGGGTTGGACAGAAGGTCTGAAGAACATCAAGAAAGGCGGTAAGATCAAACTGGTTATTCCACCAGAACTGGCTTACGGCAAAGCGGGTGTTCCGGGGATCCCACCGAATTCTACCCTGGTGTTTGACGTAGAGCTGCTGGATGTGAAACCAGCGCCGAAGGCTGATGCAAAGCCGGAAGCTGATGCGAAAGCCGCAGATTCTGCTAAAAAATAA", + "dna_sequence_length": 813, + "functions": [ + "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" + ], + "id": "CDS_3285", + "location": [ + [ + "NC_000913", + 3477419, + "-", + 813 + ] + ], + "md5": "d759cf9123b3a0b8f6b7495860fc5601", + "parent_gene": "", + "protein_md5": "806279ae507c35c6fffa477f138c7919", + "protein_translation": "MKSLFKVTLLATTMAVALHAPITFAAEAAKPATAADSKAAFKNDDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010944" + ], + [ + "gene_synonym", + "ECK3335" + ], + [ + "gene_synonym", + "EcoGene:EG11664" + ], + [ + "gene_synonym", + "GI:16131227" + ], + [ + "gene_synonym", + "GeneID:947849" + ], + [ + "gene_synonym", + "JW3310" + ], + [ + "gene_synonym", + "NP_417807.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8R4" + ], + [ + "gene_synonym", + "b3348" + ], + [ + "gene_synonym", + "slyX" + ] + ], + "dna_sequence": "ATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGA", + "dna_sequence_length": 219, + "functions": [ + "phi X174 lysis protein" + ], + "id": "CDS_3286", + "location": [ + [ + "NC_000913", + 3477640, + "+", + 219 + ] + ], + "md5": "fc566ba541025f2ce5f086d0e80e89e1", + "parent_gene": "", + "protein_md5": "00bc8ba7a63c1b8b0b2f031a6c496b49", + "protein_translation": "MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKLKASQPSNIASQAEETPPPHY", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010946" + ], + [ + "gene_synonym", + "ECK3336" + ], + [ + "gene_synonym", + "EcoGene:EG11663" + ], + [ + "gene_synonym", + "GI:16131228" + ], + [ + "gene_synonym", + "GeneID:947859" + ], + [ + "gene_synonym", + "JW3311" + ], + [ + "gene_synonym", + "NP_417808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K9" + ], + [ + "gene_synonym", + "b3349" + ], + [ + "gene_synonym", + "slyD" + ] + ], + "dna_sequence": "ATGAAAGTAGCAAAAGACCTGGTGGTCAGCCTGGCCTATCAGGTACGTACAGAAGACGGTGTGTTGGTTGATGAGTCTCCGGTGAGTGCGCCGCTGGACTACCTGCATGGTCACGGTTCCCTGATCTCTGGCCTGGAAACGGCGCTGGAAGGTCATGAAGTTGGCGACAAATTTGATGTCGCTGTTGGCGCGAACGACGCTTACGGTCAGTACGACGAAAACCTGGTGCAACGTGTTCCTAAAGACGTATTTATGGGCGTTGATGAACTGCAGGTAGGTATGCGTTTCCTGGCTGAAACCGACCAGGGTCCGGTACCGGTTGAAATCACTGCGGTTGAAGACGATCACGTCGTGGTTGATGGTAACCACATGCTGGCCGGTCAGAACCTGAAATTCAACGTTGAAGTTGTGGCGATTCGCGAAGCGACTGAAGAAGAACTGGCTCATGGTCACGTTCACGGCGCGCACGATCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACACGGTGGCGAAGGCTGCTGTGGCGGTAAAGGCAACGGCGGTTGCGGTTGCCACTAA", + "dna_sequence_length": 591, + "functions": [ + "FKBP-type peptidyl prolyl cis-trans isomerase (rotamase)" + ], + "id": "CDS_3287", + "location": [ + [ + "NC_000913", + 3478497, + "-", + 591 + ] + ], + "md5": "fe7006a5cc0faf16547666459c61223e", + "parent_gene": "", + "protein_md5": "d846b3446c74769630da84764ee91886", + "protein_translation": "MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285072" + ], + [ + "gene_synonym", + "ECK3337" + ], + [ + "gene_synonym", + "EcoGene:EG14364" + ], + [ + "gene_synonym", + "GI:94541125" + ], + [ + "gene_synonym", + "GeneID:1450290" + ], + [ + "gene_synonym", + "JW3312" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADW8" + ], + [ + "gene_synonym", + "YP_588468.1" + ], + [ + "gene_synonym", + "b4551" + ], + [ + "gene_synonym", + "yheV" + ] + ], + "dna_sequence": "ATGGCAATCCGAAAACGTTTTATTGCGGGCGCAAAATGCCCGGCCTGTCAGGCGCAGGATTCAATGGCGATGTGGCGCGAAAATAATATTGATATTGTTGAATGTGTTAAGTGCGGACATCAGATGCGAGAAGCAGACAAAGAAGCCCGCGATCACGTTCGCAAAGATGAGCAAGTGATCGGGATTTTTCATCCGGACTAG", + "dna_sequence_length": 201, + "functions": [ + "DUF2387 family putative metal-binding protein" + ], + "id": "CDS_3288", + "location": [ + [ + "NC_000913", + 3478792, + "-", + 201 + ] + ], + "md5": "815126b1228be48692d6f9228bb19c9d", + "parent_gene": "", + "protein_md5": "04826ee02de2e8ea82315341ca3f5b4e", + "protein_translation": "MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010949" + ], + [ + "gene_synonym", + "ECK3338" + ], + [ + "gene_synonym", + "EcoGene:EG20110" + ], + [ + "gene_synonym", + "GI:16131229" + ], + [ + "gene_synonym", + "GeneID:947858" + ], + [ + "gene_synonym", + "JW3313" + ], + [ + "gene_synonym", + "NP_417809.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45522" + ], + [ + "gene_synonym", + "b3350" + ], + [ + "gene_synonym", + "kefB" + ], + [ + "gene_synonym", + "trkB" + ] + ], + "dna_sequence": "ATGGAAGGTTCCGATTTTTTACTCGCAGGAGTGCTGTTTCTCTTCGCGGCGGTGGCTGCGGTGCCGCTGGCATCGCGGCTGGGTATTGGCGCTGTGTTGGGATATTTGCTGGCAGGGATTGCAATTGGCCCGTGGGGGCTGGGGTTTATTAGCGACGTCGATGAGATCCTCCACTTTTCGGAACTCGGCGTGGTATTCCTGATGTTTATCATCGGCCTTGAGTTGAATCCCTCCAAACTTTGGCAACTGCGGCGTTCGATTTTTGGCGTAGGCGCGGCACAGGTGCTGTTAAGCGCGGCGTTGCTGGCGGGATTATTGATGCTGACGGATTTCGCCTGGCAGGCGGCGGTGGTCGGTGGCATTGGCCTTGCGATGTCTTCAACTGCAATGGCGTTGCAATTGATGCGTGAGAAAGGGATGAATCGCAGCGAATCCGGCCAGCTCGGGTTTTCGGTTCTGCTGTTTCAGGATCTGGCAGTAATCCCAGCACTGGCGTTAGTGCCGTTGTTGGCGGGGTCGGCAGACGAACATTTCGACTGGATGAAGGTCGGCATGAAGGTGCTGGCGTTTGTCGGCATGCTGATTGGTGGGCGCTATTTACTGCGTCCGGTATTCCGCTTTATTGCAGCTTCTGGCGTGCGGGAAGTGTTCACCGCCGCGACGCTGCTGCTGGTGTTGGGTTCCGCATTGTTTATGGATGCGCTGGGGCTGTCGATGGCGCTCGGTACATTTATTGCGGGCGTGCTGCTGGCGGAAAGTGAATATCGCCATGAACTGGAAACGGCTATCGATCCCTTCAAAGGCTTGCTGCTCGGTTTGTTCTTTATCTCTGTCGGCATGTCACTCAACCTCGGGGTGCTTTATACCCATCTGTTGTGGGTAGTGATAAGCGTGGTTGTGCTGGTGGCGGTGAAAATTCTCGTGCTGTATCTGCTGGCGCGATTGTATGGCGTGCGTAGCTCAGAGCGGATGCAGTTTGCTGGCGTGTTGAGTCAGGGTGGTGAGTTTGCCTTTGTCCTCTTTTCTACCGCTTCTTCACAACGCTTATTCCAGGGCGACCAGATGGCGTTGTTGCTGGTGACGGTGACGCTTTCCATGATGACCACGCCGTTGCTGATGAAGCTGGTGGATAAATGGCTATCCCGCCAGTTTAACGGACCGGAAGAAGAAGACGAAAAACCGTGGGTCAACGATGATAAACCCCAGGTCATTGTCGTGGGCTTCGGGCGTTTTGGTCAGGTGATTGGTCGTTTGCTGATGGCAAATAAAATGCGCATTACCGTGCTGGAGCGGGATATCAGCGCCGTTAACCTGATGCGTAAATACGGCTACAAAGTTTATTACGGCGACGCCACGCAGGTCGATCTTTTACGTTCTGCGGGTGCAGAGGCCGCTGAGTCTATCGTCATTACCTGTAACGAGCCGGAAGACACCATGAAGCTGGTGGAAATATGCCAACAGCACTTTCCGCATTTGCATATTCTTGCGCGAGCGCGCGGACGTGTGGAAGCGCATGAGTTATTACAGGCAGGGGTGACGCAGTTTTCCCGTGAAACATTCTCCAGTGCGTTAGAGCTGGGGCGCAAGACGCTGGTCACGCTTGGCATGCATCCGCATCAGGCACAGCGAGCGCAACTGCATTTTCGCCGCCTGGATATGCGGATGCTGCGAGAGCTCATCCCAATGCATGCCGATACCGTACAAATTTCTCGCGCCAGGGAAGCCCGACGCGAACTGGAAGAGATTTTCCAGCGTGAAATGCAACAAGAACGACGCCAGCTGGACGGCTGGGATGAATTTGAGTAG", + "dna_sequence_length": 1806, + "functions": [ + "potassium:proton antiporter" + ], + "id": "CDS_3289", + "location": [ + [ + "NC_000913", + 3480607, + "-", + 1806 + ] + ], + "md5": "1f671571864e11a93fe1be8b92023713", + "parent_gene": "", + "protein_md5": "32748b567785b5ea6d93880ce1dcba04", + "protein_translation": "MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALLAGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDWMKVGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGGEFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDGWDEFE", + "protein_translation_length": 601, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010951" + ], + [ + "gene_synonym", + "ECK3339" + ], + [ + "gene_synonym", + "EcoGene:EG12902" + ], + [ + "gene_synonym", + "GI:16131230" + ], + [ + "gene_synonym", + "GeneID:947857" + ], + [ + "gene_synonym", + "JW3314" + ], + [ + "gene_synonym", + "NP_417810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A756" + ], + [ + "gene_synonym", + "b3351" + ], + [ + "gene_synonym", + "kefG" + ], + [ + "gene_synonym", + "yheR" + ] + ], + "dna_sequence": "ATGATGTCTCAGCCAGCGAAAGTTTTGCTGCTGTATGCCCATCCGGAATCTCAGGACTCGGTGGCAAACCGGGTACTGCTTAAACCGGCCACGCAGCTCAGCAATGTTACCGTGCACGACCTTTACGCGCACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAGGTGATTGTCTTTCAGCATCCTCTTTATACCTATAGCTGCCCGGCGCTACTGAAAGAGTGGCTGGACCGGGTATTAAGTCGTGGTTTTGCCAGCGGGCCGGGAGGAAACCAACTGGCGGGAAAGTACTGGCGTAGCGTGATTACCACCGGCGAGCCGGAAAGTGCTTACCGTTATGACGCGCTGAATCGCTACCCGATGAGCGATGTGCTGCGCCCCTTTGAACTGGCGGCGGGCATGTGCCGGATGCATTGGTTAAGTCCCATCATTATTTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGCCTACGGTGACTGGCTGGCAAATCCGCTGTCTCCAGGAGGCCGCTGA", + "dna_sequence_length": 555, + "functions": [ + "potassium-efflux system ancillary protein for KefB, glutathione-regulated" + ], + "id": "CDS_3290", + "location": [ + [ + "NC_000913", + 3481161, + "-", + 555 + ] + ], + "md5": "65989c0e39d9ca269910540b8c3b0ea7", + "parent_gene": "", + "protein_md5": "62ab7da6ee5eada79ce79cadab54074f", + "protein_translation": "MMSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSPGGR", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010955" + ], + [ + "gene_synonym", + "ECK3340" + ], + [ + "gene_synonym", + "EcoGene:EG12903" + ], + [ + "gene_synonym", + "GI:16131231" + ], + [ + "gene_synonym", + "GeneID:947856" + ], + [ + "gene_synonym", + "JW3315" + ], + [ + "gene_synonym", + "NP_417811.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63389" + ], + [ + "gene_synonym", + "b3352" + ], + [ + "gene_synonym", + "yheS" + ] + ], + "dna_sequence": "ATGATTGTTTTCTCCTCGTTACAAATTCGTCGCGGCGTGCGCGTCCTGCTGGATAATGCCACCGCCACCATCAACCCTGGGCAGAAAGTCGGCCTGGTGGGTAAAAACGGCTGTGGTAAATCTACCCTGCTGGCATTGCTGAAAAATGAAATCAGCGCCGACGGCGGCAGCTACACCTTTCCGGGAAGCTGGCAACTGGCGTGGGTGAATCAGGAAACGCCGGCGTTACCGCAAGCGGCGCTGGAATATGTCATTGACGGCGACCGTGAATATCGTCAACTAGAAGCGCAGCTACACGACGCCAACGAACGTAACGACGGGCACGCCATTGCGACCATTCATGGCAAGCTGGATGCTATTGACGCATGGAGTATTCGCTCCCGTGCTGCCAGCCTGCTGCACGGCCTCGGTTTCAGCAATGAACAACTGGAGCGCCCGGTAAGTGATTTTTCCGGGGGCTGGCGTATGCGTCTTAACCTTGCCCAGGCGCTGATTTGCCGTTCAGACTTGCTGCTGCTCGACGAACCGACTAACCACCTCGATCTCGATGCCGTTATCTGGCTGGAAAAATGGCTGAAGAGCTATCAGGGCACGCTGATCCTGATCTCTCACGACCGCGACTTCCTCGATCCGATCGTCGATAAAATTATTCATATCGAACAACAAAGCATGTTCGAGTACACCGGCAACTACAGTTCGTTTGAAGTACAGCGCGCCACCCGTCTGGCGCAGCAACAAGCGATGTACGAAAGCCAGCAGGAACGCGTAGCGCATCTGCAAAGTTATATCGACCGTTTCCGTGCCAAAGCCACCAAAGCGAAGCAGGCCCAGAGCCGCATTAAGATGCTCGAGCGTATGGAGCTAATTGCCCCCGCGCACGTCGACAACCCGTTCCGCTTTAGCTTCCGCGCGCCGGAAAGCCTGCCAAATCCGTTACTGAAGATGGAAAAAGTCAGCGCGGGCTATGGCGATCGCATTATTCTCGACTCGATTAAACTGAACCTGGTGCCCGGCTCGCGTATTGGTCTGTTAGGCCGCAATGGCGCGGGTAAATCGACATTAATCAAACTGTTAGCCGGTGAACTTGCGCCAGTCAGCGGTGAAATTGGTCTGGCGAAAGGGATCAAACTCGGCTACTTCGCCCAGCATCAACTTGAATACCTGCGCGCCGACGAATCACCTATTCAACATCTGGCACGTTTAGCGCCGCAGGAGCTGGAACAAAAACTGCGTGACTACCTCGGCGGCTTTGGTTTCCAGGGCGATAAAGTAACCGAAGAAACGCGCCGCTTCTCCGGTGGGGAAAAAGCCCGCCTGGTGCTGGCATTAATTGTCTGGCAGCGGCCGAATCTGCTGCTGCTCGACGAACCGACTAACCACCTTGACCTCGACATGCGTCAGGCACTCACCGAAGCATTAATCGAGTTTGAAGGCGCGCTGGTTGTCGTTTCGCACGACCGTCATTTGCTGCGTTCCACCACTGACGATCTCTACCTGGTTCACGATCGTAAAGTCGAACCGTTCGACGGCGATCTGGAAGATTATCAACAGTGGTTGAGCGACGTACAAAAGCAGGAAAACCAGACCGACGAAGCGCCAAAAGAGAATGCGAACAGCGCCCAGGCACGTAAAGATCAGAAGCGTCGGGAAGCTGAGCTGCGTGCGCAAACCCAGCCACTGCGTAAAGAGATTGCCCGTCTGGAAAAAGAGATGGAGAAGCTGAACGCGCAACTGGCGCAGGCGGAAGAGAAACTCGGCGACAGCGAACTGTATGACCAGAGCCGTAAAGCGGAGTTGACCGCCTGCCTGCAACAGCAAGCCAGCGCCAAATCCGGCCTGGAAGAGTGCGAAATGGCATGGCTGGAAGCCCAGGAGCAGCTTGAGCAGATGCTGCTGGAAGGCCAAAGCAACTGA", + "dna_sequence_length": 1914, + "functions": [ + "ABC-F family protein predicted regulatory ATPase" + ], + "id": "CDS_3291", + "location": [ + [ + "NC_000913", + 3481289, + "+", + 1914 + ] + ], + "md5": "18f8300c6208c9bc20cb25cfb0a36b56", + "parent_gene": "", + "protein_md5": "ba5c462cef0b296fac2ec3a842557184", + "protein_translation": "MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN", + "protein_translation_length": 637, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010957" + ], + [ + "gene_synonym", + "ECK3341" + ], + [ + "gene_synonym", + "EcoGene:EG12904" + ], + [ + "gene_synonym", + "GI:16131232" + ], + [ + "gene_synonym", + "GeneID:947855" + ], + [ + "gene_synonym", + "JW3316" + ], + [ + "gene_synonym", + "NP_417812.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45524" + ], + [ + "gene_synonym", + "b3353" + ], + [ + "gene_synonym", + "yheT" + ] + ], + "dna_sequence": "ATGGCGCAGATAACGACGACCGATGCCAATGAATTCAGCAGCAGTGCTGAATTCATCCCCATGCGCGGCTTTAGCAATTGTCATCTGCAAACCATGCTGCCGCGTCTGTTTCGTCGTCAGGTGAAATTCACCCCGTACTGGCAGCGGCTGGAGTTGCCCGACGGCGATTTTGTCGATCTTGCGTGGAGTGAAAACCCTGCACAGGCGCAACATAAACCTCGTCTGGTGGTGTTTCACGGGCTGGAAGGCAGTCTCAACAGCCCTTACGCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCGGCTGGCTGGGCGTGGTGATGCATTTTCGCGGATGCAGCGGTGAACCAAACCGTATGCACCGCATTTACCATTCGGGCGAAACCGAAGACGCCAGTTGGTTTTTACGCTGGCTGCAACGCGAATTTGGTCATGCGCCAACGGCTGCCGTCGGCTATTCGCTCGGCGGTAATATGCTGGCCTGTTTGCTGGCAAAGGAAGGCAATGATCTCCCGGTTGATGCGGCGGTGATTGTCTCTGCGCCGTTTATGCTGGAAGCCTGTAGCTATCATATGGAAAAGGGCTTTTCCCGCGTTTATCAGCGTTACTTGCTGAACCTGTTAAAAGCCAATGCCGCGCGCAAGCTGGCAGCCTACCCCGGAACGCTGCCGATTAATCTCGCGCAGTTAAAATCGGTACGTCGCATCCGTGAATTTGACGATCTCATCACCGCCAGAATTCACGGCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTCCCCCCGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGCGGTACATTACTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAATCATGTTGA", + "dna_sequence_length": 1023, + "functions": [ + "UPF0017 family putative hydrolase" + ], + "id": "CDS_3292", + "location": [ + [ + "NC_000913", + 3483202, + "+", + 1023 + ] + ], + "md5": "747fb18231d2b31a2e17f9f326da6d8d", + "parent_gene": "", + "protein_md5": "4e07c56169587996d0a84a2c24141d5d", + "protein_translation": "MAQITTTDANEFSSSAEFIPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEAKSC", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010959" + ], + [ + "gene_synonym", + "ECK3342" + ], + [ + "gene_synonym", + "EcoGene:EG12905" + ], + [ + "gene_synonym", + "GI:16131233" + ], + [ + "gene_synonym", + "GeneID:947863" + ], + [ + "gene_synonym", + "JW3317" + ], + [ + "gene_synonym", + "NP_417813.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67624" + ], + [ + "gene_synonym", + "b3354" + ], + [ + "gene_synonym", + "yheU" + ] + ], + "dna_sequence": "ATGTTGATTCCGTGGCAAGACCTCTCCCCCGAAACGCTGGAAAATTTAATTGAAAGCTTTGTGTTACGTGAAGGCACCGATTATGGTGAACATGAGCGTACACTTGAACAGAAAGTCGCCGACGTCAAACGCCAGCTACAGTGCGGAGAAGCGGTGCTGGTATGGTCGGAGCTGCACGAAACGGTCAATATTATGCCGCGCAGTCAGTTTCGCGAATAA", + "dna_sequence_length": 219, + "functions": [ + "UPF0270 family protein" + ], + "id": "CDS_3293", + "location": [ + [ + "NC_000913", + 3484218, + "+", + 219 + ] + ], + "md5": "9991114176eb0b596f658a38208156ca", + "parent_gene": "", + "protein_md5": "7033524c6835105f1e9a884500a6b723", + "protein_translation": "MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKRQLQCGEAVLVWSELHETVNIMPRSQFRE", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010962" + ], + [ + "gene_synonym", + "ECK3343" + ], + [ + "gene_synonym", + "EcoGene:EG12365" + ], + [ + "gene_synonym", + "GI:16131234" + ], + [ + "gene_synonym", + "GeneID:947862" + ], + [ + "gene_synonym", + "JW3318" + ], + [ + "gene_synonym", + "NP_417814.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX5" + ], + [ + "gene_synonym", + "b3355" + ], + [ + "gene_synonym", + "prk?" + ], + [ + "gene_synonym", + "prkB" + ], + [ + "gene_synonym", + "yhfF" + ] + ], + "dna_sequence": "ATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGGGCGGCATATCAGCTACTTCGGCCCCGAGGCTAACGACTTCGGCCTGCTGGAACAAACCTTCATTGAATACGGTCAGAGCGGCAAAGGGAAATCTCGCAAATATCTGCATACCTACGACGAAGCCGTACCGTGGAATCAGGTACCGGGGACATTCACCCCCTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGTGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTCCAGCGCGTTCCCACCGTCGACACTTCAAACCCGTTCGCGGCAAAAGGTATCCCGTCGCTCGATGAAAGCTTTGTGGTGATCCATTTTCGTAATCTGGAAGGGATCGATTTCCCCTGGCTGCTGGCGATGTTGCAAGGCTCATTCATTTCCCACATCAATACGTTAGTGGTACCGGGCGGCAAAATGGGTCTGGCAATGGAATTAATTATGCTGCCGCTGGTGCAACGATTGATGGAAGGAAAGAAAATCGAGTAA", + "dna_sequence_length": 870, + "functions": [ + "putative phosphoribulokinase" + ], + "id": "CDS_3294", + "location": [ + [ + "NC_000913", + 3484490, + "+", + 870 + ] + ], + "md5": "833f9e8959db6d6609956785b15edbdd", + "parent_gene": "", + "protein_md5": "d96b7e35e3d96f59c5fb9bfa13343bdb", + "protein_translation": "MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010964" + ], + [ + "gene_synonym", + "ECK3344" + ], + [ + "gene_synonym", + "EcoGene:EG11182" + ], + [ + "gene_synonym", + "GI:16131235" + ], + [ + "gene_synonym", + "GeneID:947860" + ], + [ + "gene_synonym", + "JW3319" + ], + [ + "gene_synonym", + "NP_417815.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADX1" + ], + [ + "gene_synonym", + "b3356" + ], + [ + "gene_synonym", + "yhfA" + ] + ], + "dna_sequence": "ATGCAAGCGCGAGTGAAGTGGGTCGAAGGGTTAACTTTTCTGGGCGAATCCGCCTCTGGTCATCAGATTTTAATGGACGGCAACTCAGGCGATAAAGCACCAAGTCCGATGGAAATGGTGTTGATGGCGGCGGGTGGTTGCAGTGCCATCGATGTGGTTTCGATCCTGCAAAAAGGGCGTCAGGATGTGGTCGATTGTGAAGTAAAATTGACCTCTGAACGCCGCGAAGAGGCACCACGCCTGTTTACGCACATTAATCTGCATTTTATCGTCACCGGTCGCGACCTGAAAGACGCAGCGGTTGCGCGTGCGGTTGATCTCTCTGCCGAGAAATATTGTTCAGTGGCGTTGATGCTGGAAAAAGCGGTGAATATTACTCACTCGTATGAAGTGGTTGCCGCGTGA", + "dna_sequence_length": 405, + "functions": [ + "OsmC family protein" + ], + "id": "CDS_3295", + "location": [ + [ + "NC_000913", + 3485818, + "-", + 405 + ] + ], + "md5": "8dda6a4ba62daa4d08f824aa57f32e54", + "parent_gene": "", + "protein_md5": "6dec421aecff53c08f79dd15432e59cb", + "protein_translation": "MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010970" + ], + [ + "gene_synonym", + "ECK3345" + ], + [ + "gene_synonym", + "EcoGene:EG10164" + ], + [ + "gene_synonym", + "GI:16131236" + ], + [ + "gene_synonym", + "GeneID:947867" + ], + [ + "gene_synonym", + "JW5702" + ], + [ + "gene_synonym", + "NP_417816.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACJ8" + ], + [ + "gene_synonym", + "b3357" + ], + [ + "gene_synonym", + "cap" + ], + [ + "gene_synonym", + "crp" + ], + [ + "gene_synonym", + "csm" + ] + ], + "dna_sequence": "ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA", + "dna_sequence_length": 633, + "functions": [ + "cAMP-activated global transcription factor, mediator of catabolite repression" + ], + "id": "CDS_3296", + "location": [ + [ + "NC_000913", + 3486120, + "+", + 633 + ] + ], + "md5": "4b0a7b92e9ef21c8818d12acc3644f22", + "parent_gene": "", + "protein_md5": "9a58754a5c561c0784b75360a962f090", + "protein_translation": "MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010974" + ], + [ + "gene_synonym", + "ECK3346" + ], + [ + "gene_synonym", + "EcoGene:EG12906" + ], + [ + "gene_synonym", + "GI:90111574" + ], + [ + "gene_synonym", + "GeneID:947866" + ], + [ + "gene_synonym", + "JW5701" + ], + [ + "gene_synonym", + "NP_417817.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45537" + ], + [ + "gene_synonym", + "b3358" + ], + [ + "gene_synonym", + "yhfK" + ] + ], + "dna_sequence": "TTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGCCGTTGGGTTAATGCTTGGCGAATTACGATTCGGTCTGCTCTTCTCCCTCGTTCCTGCCTGTTGCAATATTGCGGGCCTTGATACGCCTCATAAACGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCGTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGTACGGATTGTTTAACTGGTTTTGGTTCTGGATCTGGCGCGAACAACCGCTGCGCGAGTCACTAAGTCTGCTGTACCGTGAACTGGCAGATTATTGTGAAGCCAAATACAGCCTGCTTACCCAGCACACCGACCCTGAAAAAGCGCTGCCGCCGCTGCTGGTGCGCCAGCAAAAAGCGGTCGATCTAATTACCCAGTGCTATCAGCAAATGCATATGCTTTCCGCGCAAAATAATACTGACTACAAGCGGATGCTGCGTATTTTCCAGGAGGCGCTGGATTTACAGGAACATATTTCGGTCAGTTTGCATCAGCCGGAAGAGGTGCAAAAGCTGGTCGAGCGTAGCCATGCGGAAGAAGTTATCCGCTGGAATGCGCAAACCGTCGCCGCTCGCCTGCGCGTGCTGGCTGATGACATTCTTTACCATCGCCTGCCAACGCGTTTTACGATGGAAAAGCAAATTGGCGCACTGGAAAAAATCGCCCGCCAGCATCCGGATAATCCGGTTGGGCAATTCTGCTACTGGCATTTCAGCCGCATCGCCCGCGTGCTGCGCACCCAAAAACCGCTCTATGCCCGTGACTTACTGGCCGATAAACAGCGGCGAATGCCATTACTTCCGGCGCTGAAAAGTTATCTGTCACTAAAGTCTCCGGCGCTACGCAATGCCGGACGACTCAGTGTGATGTTAAGCGTTGCCAGCCTGATGGGCACCGCGCTGCATCTGCCGAAGTCGTACTGGATCCTGATGACGGTATTGCTGGTGACACAAAATGGCTATGGCGCAACCCGTCTGAGGATTGTGAATCGCTCCGTGGGAACCGTGGTCGGGTTAATCATTGCGGGCGTGGCGCTGCACTTTAAAATTCCCGAAGGTTACACCCTGACGTTGATGCTGATTACCACCCTCGCCAGCTACCTGATATTGCGCAAAAACTACGGCTGGGCGACGGTCGGTTTTACTATTACCGCAGTGTATACCCTGCAACTATTGTGGTTGAACGGCGAGCAATACATCCTTCCGCGTCTTATCGATACCATTATTGGTTGTTTAATTGCTTTCGGCGGTACTGTCTGGCTGTGGCCGCAGTGGCAGAGCGGGTTATTGCGTAAAAACGCCCATGATGCTTTAGAAGCCTATCAGGAAGCGATTCGCTTGATTCTTAGCGAGGATCCGCAACCTACGCCACTGGCCTGGCAGCGAATGCGGGTAAATCAGGCACATAACACTCTGTATAACTCATTGAATCAGGCGATGCAGGAACCGGCGTTTAACAGCCATTATCTGGCAGATATGAAACTGTGGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGATGGCATGGCGTCAGCGACCGCATCACGGGATTTGGCTGAGTCGCAAGTTGCGGGATTCGAAGGCGTAA", + "dna_sequence_length": 2103, + "functions": [ + "putative transporter, FUSC superfamily inner membrane protein" + ], + "id": "CDS_3297", + "location": [ + [ + "NC_000913", + 3486791, + "+", + 2103 + ] + ], + "md5": "9918ad4bb4cd721d82a724bd455d21d2", + "parent_gene": "", + "protein_md5": "7ddcc29f365670d810d9c59a9135a73e", + "protein_translation": "MFPPMWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTAELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA", + "protein_translation_length": 700, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010976" + ], + [ + "gene_synonym", + "Arg1" + ], + [ + "gene_synonym", + "ECK3347" + ], + [ + "gene_synonym", + "EcoGene:EG10066" + ], + [ + "gene_synonym", + "GI:16131238" + ], + [ + "gene_synonym", + "GeneID:947864" + ], + [ + "gene_synonym", + "JW3322" + ], + [ + "gene_synonym", + "NP_417818.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18335" + ], + [ + "gene_synonym", + "alaB" + ], + [ + "gene_synonym", + "argD" + ], + [ + "gene_synonym", + "argG" + ], + [ + "gene_synonym", + "b3359" + ], + [ + "gene_synonym", + "dapC" + ], + [ + "gene_synonym", + "dtu" + ] + ], + "dna_sequence": "ATGGCAATTGAACAAACAGCAATTACACGCGCGACTTTCGATGAAGTGATCCTGCCGATTTATGCTCCGGCAGAGTTTATTCCGGTAAAAGGTCAGGGCAGCCGAATCTGGGATCAGCAAGGCAAGGAGTATGTCGATTTCGCGGGTGGCATTGCAGTTACGGCGTTGGGCCATTGCCATCCTGCGCTGGTGAACGCGTTAAAAACCCAGGGCGAAACTCTGTGGCATATCAGTAACGTTTTCACCAATGAACCGGCGCTGCGTCTTGGGCGTAAACTGATTGAGGCAACGTTTGCCGAACGCGTGGTGTTTATGAACTCCGGCACGGAAGCTAACGAAACCGCCTTTAAACTGGCACGCCATTACGCCTGTGTGCGTCATAGCCCGTTCAAAACCAAAATTATTGCCTTCCATAACGCTTTTCATGGTCGCTCGCTGTTTACCGTTTCGGTGGGTGGGCAGCCAAAATATTCCGACGGCTTTGGGCCGAAACCGGCAGACATCATCCACGTTCCCTTTAACGATCTCCATGCAGTGAAAGCGGTGATGGATGATCACACCTGTGCGGTGGTGGTTGAGCCGATCCAGGGCGAGGGCGGTGTGACGGCAGCGACGCCAGAGTTTTTGCAGGGCTTGCGCGAGCTGTGCGATCAACATCAGGCATTATTGGTGTTTGATGAAGTGCAGTGCGGGATGGGGCGGACCGGCGATTTGTTTGCTTACATGCACTACGGCGTTACGCCGGATATTCTGACCTCTGCGAAAGCGTTAGGCGGCGGCTTCCCGATTAGCGCCATGCTGACCACGGCGGAAATTGCTTCTGCGTTTCATCCTGGTTCTCACGGTTCCACCTACGGCGGTAATCCTCTGGCCTGTGCAGTAGCGGGGGCGGCGTTTGATATCATCAATACCCCTGAAGTGCTGGAAGGCATTCAGGCGAAACGCCAGCGTTTTGTTGACCATCTGCAGAAGATCGATCAGCAGTACGATGTATTTAGCGATATTCGCGGTATGGGGCTGTTGATTGGCGCAGAGCTGAAACCACAGTACAAAGGTCGGGCGCGTGATTTCCTGTATGCGGGCGCAGAGGCTGGCGTAATGGTGCTGAATGCCGGACCGGATGTGATGCGTTTTGCACCGTCGCTGGTGGTGGAAGATGCGGATATCGATGAAGGGATGCAACGTTTCGCCCACGCGGTGGCGAAGGTGGTTGGGGCGTAA", + "dna_sequence_length": 1221, + "functions": [ + "bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase" + ], + "id": "CDS_3298", + "location": [ + [ + "NC_000913", + 3490180, + "-", + 1221 + ] + ], + "md5": "7f8bfc2bacdcdcda8fd05d40cf9a98f7", + "parent_gene": "", + "protein_md5": "08b0189e5531375beafa9740e633c217", + "protein_translation": "MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKVVGA", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010983" + ], + [ + "gene_synonym", + "ECK3348" + ], + [ + "gene_synonym", + "EcoGene:EG10682" + ], + [ + "gene_synonym", + "GI:16131239" + ], + [ + "gene_synonym", + "GeneID:947873" + ], + [ + "gene_synonym", + "JW3323" + ], + [ + "gene_synonym", + "NP_417819.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00903" + ], + [ + "gene_synonym", + "b3360" + ], + [ + "gene_synonym", + "pabA" + ] + ], + "dna_sequence": "ATGATCCTGCTTATAGATAACTACGATTCTTTTACCTGGAACCTCTACCAGTACTTTTGTGAACTGGGGGCGGATGTGCTGGTTAAGCGCAACGATGCGTTGACGCTGGCGGATATCGACGCCCTTAAACCACAAAAAATTGTCATCTCACCTGGCCCCTGTACGCCAGATGAAGCCGGGATCTCCCTTGACGTTATTCGCCACTATGCCGGGCGCTTGCCGATTCTTGGCGTCTGCCTCGGTCATCAGGCAATGGCGCAGGCATTTGGCGGTAAAGTTGTGCGCGCCGCAAAGGTCATGCACGGCAAAACCTCGCCGATTACACATAACGGTGAGGGCGTATTTCGGGGGCTGGCAAATCCACTTACCGTGACACGCTACCATTCGCTGGTGGTGGAACCTGACTCATTACCAGCGTGCTTTGACGTGACGGCCTGGAGCGAAACCCGAGAGATTATGGGGATTCGCCATCGCCAGTGGGATCTGGAAGGTGTGCAGTTCCATCCAGAAAGTATTCTTAGCGAACAAGGACATCAACTGCTGGCTAATTTCCTGCATCGCTGA", + "dna_sequence_length": 564, + "functions": [ + "aminodeoxychorismate synthase, subunit II" + ], + "id": "CDS_3299", + "location": [ + [ + "NC_000913", + 3490829, + "-", + 564 + ] + ], + "md5": "e0d1a814c761c5c1c1a4bd3b5aa79433", + "parent_gene": "", + "protein_md5": "561642d7f46dcb3b4b9a787724e0baaa", + "protein_translation": "MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010987" + ], + [ + "gene_synonym", + "ECK3349" + ], + [ + "gene_synonym", + "EcoGene:EG10307" + ], + [ + "gene_synonym", + "GI:16131240" + ], + [ + "gene_synonym", + "GeneID:947872" + ], + [ + "gene_synonym", + "JW3324" + ], + [ + "gene_synonym", + "NP_417820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P20605" + ], + [ + "gene_synonym", + "b3361" + ], + [ + "gene_synonym", + "fic" + ], + [ + "gene_synonym", + "vhpT" + ] + ], + "dna_sequence": "ATGAGCGATAAATTCGGCGAAGGGCGCGATCCGTATCTTTATCCAGGCCTTGATATCATGCGTAACCGGCTGAACATCCGCCAGCAGCAGCGGCTGGAACAGGCCGCTTACGAAATGACGGCGCTGCGTGCTGCGACCATTGAGCTTGGTCCGCTGGTGCGCGGTTTACCGCATTTGCGAACTATCCATCGCCAGCTGTATCAGGATATTTTCGACTGGGCAGGGCAACTGCGTGAAGTTGATATTTATCAGGGTGATACGCCGTTCTGCCACTTTGCTTATATCGAAAAAGAGGGCAATGCCCTGATGCAGGATCTGGAGGAAGAAGGTTATCTGGTTGGCCTGGAGAAAGCGAAGTTCGTCGAGCGGCTGGCGCATTACTATTGTGAAATCAACGTGCTGCATCCCTTCCGGGTGGGAAGTGGTCTGGCACAGCGGATCTTCTTCGAGCAACTGGCGATTCATGCCGGATATCAACTGAGCTGGCAGGGTATCGAAAAAGAGGCCTGGAATCAGGCAAATCAGAGTGGGGCAATGGGGGATCTCACCGCACTGCAGATGATATTTAGCAAAGTGGTAAGCGAAGCCGGGGAATCTGAGTAA", + "dna_sequence_length": 603, + "functions": [ + "stationary phase-induced protein, putative toxin" + ], + "id": "CDS_3300", + "location": [ + [ + "NC_000913", + 3491463, + "-", + 603 + ] + ], + "md5": "49fbed09e39a8fdaa083ed0a07a390b9", + "parent_gene": "", + "protein_md5": "aee8e5d8a562867c6ef59667b804c2ed", + "protein_translation": "MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRAATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNALMQDLEEEGYLVGLEKAKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010989" + ], + [ + "gene_synonym", + "ECK3350" + ], + [ + "gene_synonym", + "EcoGene:EG12374" + ], + [ + "gene_synonym", + "GI:16131241" + ], + [ + "gene_synonym", + "GeneID:947871" + ], + [ + "gene_synonym", + "JW3325" + ], + [ + "gene_synonym", + "NP_417821.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADX5" + ], + [ + "gene_synonym", + "b3362" + ], + [ + "gene_synonym", + "vhpA" + ], + [ + "gene_synonym", + "yhfG" + ] + ], + "dna_sequence": "GTGAAGAAACTCACCGATAAGCAAAAGTCCCGTCTCTGGGAGCTTCAGCGTAATCGTAATTTTCAGGCCAGTCGCCGTCTTGAAGGCGTCGAGATGCCTTTAGTCACTCTTACTGCCGCAGAGGCTTTAGCGCGCCTTGAAGAGCTGAGGAGTCACTATGAGCGATAA", + "dna_sequence_length": 168, + "functions": [ + "putative antitoxin for Fic" + ], + "id": "CDS_3301", + "location": [ + [ + "NC_000913", + 3491620, + "-", + 168 + ] + ], + "md5": "68e533fcc9d85c286caf82ec6050ee8a", + "parent_gene": "", + "protein_md5": "6aa8dfa0cc24636775eed62d25a0028f", + "protein_translation": "MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEELRSHYER", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010992" + ], + [ + "gene_synonym", + "ECK3351" + ], + [ + "gene_synonym", + "EcoGene:EG10757" + ], + [ + "gene_synonym", + "GI:16131242" + ], + [ + "gene_synonym", + "GeneID:947870" + ], + [ + "gene_synonym", + "JW3326" + ], + [ + "gene_synonym", + "NP_417822.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL3" + ], + [ + "gene_synonym", + "b3363" + ], + [ + "gene_synonym", + "ppiA" + ], + [ + "gene_synonym", + "rot" + ], + [ + "gene_synonym", + "rotA" + ] + ], + "dna_sequence": "ATGTTCAAATCGACCCTGGCGGCGATGGCTGCTGTTTTCGCTCTTTCTGCTCTTTCTCCCGCAGCAATGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAGCTGGATAAACAAAAAGCGCCAGTGTCTGTGCAAAACTTTGTCGATTATGTGAACAGCGGTTTTTATAACAACACTACCTTTCACCGCGTCATTCCTGGCTTTATGATTCAGGGCGGCGGTTTCACCGAGCAGATGCAGCAGAAAAAACCAAACCCGCCAATCAAAAATGAAGCCGATAACGGCCTGCGCAACACGCGTGGCACCATCGCGATGGCACGTACCGCTGACAAAGACAGCGCCACCAGCCAGTTCTTTATCAACGTTGCCGATAACGCCTTCCTTGACCATGGTCAGCGTGATTTCGGTTACGCGGTATTTGGTAAAGTGGTGAAAGGCATGGACGTTGCCGATAAGATTTCCCAGGTGCCGACTCATGACGTTGGTCCGTACCAGAATGTGCCGTCAAAACCGGTAGTTATCCTTTCCGCTAAAGTCCTGCCGTAA", + "dna_sequence_length": 573, + "functions": [ + "peptidyl-prolyl cis-trans isomerase A (rotamase A)" + ], + "id": "CDS_3302", + "location": [ + [ + "NC_000913", + 3492297, + "-", + 573 + ] + ], + "md5": "6ec746748b84990811ce73bb650a33ac", + "parent_gene": "", + "protein_md5": "6ed557e63f9430a407a0ba7bc8dff3e8", + "protein_translation": "MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSAKVLP", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010997" + ], + [ + "gene_synonym", + "ECK3352" + ], + [ + "gene_synonym", + "EcoGene:EG11262" + ], + [ + "gene_synonym", + "GI:16131243" + ], + [ + "gene_synonym", + "GeneID:947869" + ], + [ + "gene_synonym", + "JW3327" + ], + [ + "gene_synonym", + "NP_417823.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60778" + ], + [ + "gene_synonym", + "b3364" + ], + [ + "gene_synonym", + "gutS" + ], + [ + "gene_synonym", + "tsgA" + ], + [ + "gene_synonym", + "yhfC" + ], + [ + "gene_synonym", + "yhfH" + ] + ], + "dna_sequence": "ATGACTAACAGCAATCGCATCAAGCTCACATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTGCCGGTTTGATGTTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCATCACCATGTCGATTGGTACATTCCTGGTAACACAAATGTATGAAGGGCGTCAGCGCGGTTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGCCTGCATCGGGCTGGTGTATGTCGCTATTTTTATTCTGACCTTCGGCTGTGAGTTCCCGGCGCTGGGCAAACATGCGCCAAAAACGGATGCTCCGGTAGAGAAAGAAAAGTGGGGGATCGGCGTACTGTTTCTCTCTGTTGCGGCGTTGTGCTACATCCTCGGTCAGTTAGGTTTTATCTCCTGGGTGCCTGAGTATGCCAAAGGCCTGGGCATGAGCCTGAACGACGCGGGCACGCTGGTGAGTAACTTCTGGATGTCATACATGGTCGGCATGTGGGCGTTCAGCTTTATTCTTCGCTTCTTTGATTTGCAACGCATTCTGACCGTACTGGCTGGTCTGGCTGCGATTCTGATGTACGTCTTTAACACCGGAACACCAGCACATATGGCGTGGTCAATTCTCGCTCTGGGCTTCTTCTCCAGCGCGATCTATACCACCATCATCACCCTGGGTTCACAGCAGACCAAAGTACCGTCGCCAAAACTGGTTAACTTTGTCCTGACCTGCGGAACCATCGGTACTATGTTGACCTTTGTGGTTACCGGCCCGATCGTTGAACATAGCGGTCCGCAGGCGGCACTGCTTACAGCAAACGGTCTGTACGCTGTCGTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAA", + "dna_sequence_length": 1182, + "functions": [ + "putative transporter" + ], + "id": "CDS_3303", + "location": [ + [ + "NC_000913", + 3492568, + "+", + 1182 + ] + ], + "md5": "31f1092b9f8343cd8e88e6fd35cd1cd6", + "parent_gene": "", + "protein_md5": "03f58a7009ebbdd8f41b157d962431a9", + "protein_translation": "MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFLVTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011003" + ], + [ + "gene_synonym", + "ECK3353" + ], + [ + "gene_synonym", + "EcoGene:EG10653" + ], + [ + "gene_synonym", + "GI:16131244" + ], + [ + "gene_synonym", + "GeneID:947868" + ], + [ + "gene_synonym", + "JW3328" + ], + [ + "gene_synonym", + "NP_417824.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08201" + ], + [ + "gene_synonym", + "b3365" + ], + [ + "gene_synonym", + "nirB" + ] + ], + "dna_sequence": "ATGAGCAAAGTCAGACTCGCAATTATCGGTAACGGTATGGTCGGCCATCGCTTTATCGAAGATCTTCTTGATAAATCTGATGCGGCCAACTTTGATATTACCGTTTTCTGTGAAGAACCGCGCATCGCTTATGACCGCGTACACCTCTCGTCTTACTTCTCTCACCACACCGCCGAAGAGCTGTCGCTGGTGCGCGAAGGCTTCTACGAGAAACACGGCATCAAAGTTCTGGTCGGCGAACGCGCTATCACCATCAACCGTCAGGAGAAGGTGATTCACTCCAGCGCCGGACGTACCGTTTTTTATGACAAGCTGATCATGGCAACCGGTTCCTACCCGTGGATCCCGCCAATCAAAGGTTCTGATACTCAGGACTGCTTTGTCTATCGCACTATTGAAGACCTCAACGCCATTGAATCCTGCGCCCGTCGCAGCAAACGCGGTGCCGTTGTTGGTGGCGGCCTGTTAGGTCTGGAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTATCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGCAACTGGTGCTGAACGCTATCGAACTGCCGGAAAACCCGGATTCCCTGATCCTGCCAGCACACTCGGGTAGCGGCAAGCCGTCTATCGGTGTTGATAAACTGCCGGACAGCGCGCAAATCTGCTCCTGCTTCGACGTCACCAAAGGTGATCTGATTGCTGCCATCAACAAAGGCTGCCACACAGTTGCGGCGCTGAAAGCTGAAACCAAAGCGGGTACTGGCTGCGGTGGCTGTATCCCGCTGGTCACTCAGGTACTGAACGCGGAACTGGCGAAACAGGGCATCGAAGTTAACAACAACCTGTGCGAACACTTTGCTTATTCGCGTCAGGAACTGTTCCATTTGATCCGCGTTGAAGGCATTAAAACCTTCGAAGAACTGCTGGCGAAACACGGCAAAGGCTACGGTTGTGAAGTTTGTAAACCAACCGTCGGTTCGCTGCTGGCCTCCTGCTGGAACGAATACATTCTGAAGCCGGAACATACTCCGCTGCAGGATTCTAACGACAACTTCCTCGCTAACATCCAGAAAGACGGCACCTACTCGGTGATCCCGCGTTCTCCGGGCGGTGAAATCACCCCGGAAGGGCTGATGGCGGTAGGTCGTATCGCGCGTGAATTTAATCTCTACACCAAGATCACTGGCTCCCAGCGTCTGGCGATGTTTGGCGCACAGAAAGACGATCTGCCGGAGATCTGGCGTCAGCTGATTGAAGCCGGCTTCGAAACCGGTCATGCCTATGCGAAAGCACTGCGTATGGCGAAAACCTGCGTGGGTAGCACCTGGTGCCGCTACGGCGTTGGCGACAGCGTCGGCCTCGGCGTGGAACTGGAAAACCGCTACAAAGGCATCCGTACGCCGCACAAAATGAAGTTCGGTGTCTCCGGCTGTACCCGTGAATGTTCAGAAGCTCAGGGTAAAGACGTGGGTATTATCGCCACTGAAAAAGGCTGGAACCTGTATGTTTGCGGTAACGGCGGCATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGA", + "dna_sequence_length": 2544, + "functions": [ + "nitrite reductase, large subunit, NAD(P)H-binding" + ], + "id": "CDS_3304", + "location": [ + [ + "NC_000913", + 3494011, + "+", + 2544 + ] + ], + "md5": "9615e3ed5aaa8b3a6e23f105f69bb60a", + "parent_gene": "", + "protein_md5": "629424812b09b0544699744b7968ce01", + "protein_translation": "MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA", + "protein_translation_length": 847, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011005" + ], + [ + "gene_synonym", + "ECK3354" + ], + [ + "gene_synonym", + "EcoGene:EG10655" + ], + [ + "gene_synonym", + "GI:16131245" + ], + [ + "gene_synonym", + "GeneID:947881" + ], + [ + "gene_synonym", + "JW3329" + ], + [ + "gene_synonym", + "NP_417825.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I8" + ], + [ + "gene_synonym", + "b3366" + ], + [ + "gene_synonym", + "nirD" + ] + ], + "dna_sequence": "ATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGCGGAACACCAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAA", + "dna_sequence_length": 327, + "functions": [ + "nitrite reductase (NADH) small subunit" + ], + "id": "CDS_3305", + "location": [ + [ + "NC_000913", + 3496551, + "+", + 327 + ] + ], + "md5": "5172060a19fabfc08c62a31b735ba292", + "parent_gene": "", + "protein_md5": "29e426187f3b2d75f464f93349cae78b", + "protein_translation": "MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011008" + ], + [ + "gene_synonym", + "ECK3355" + ], + [ + "gene_synonym", + "EcoGene:EG10654" + ], + [ + "gene_synonym", + "GI:90111575" + ], + [ + "gene_synonym", + "GeneID:2847757" + ], + [ + "gene_synonym", + "JW3330" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC26" + ], + [ + "gene_synonym", + "YP_026212.2" + ], + [ + "gene_synonym", + "b3367" + ], + [ + "gene_synonym", + "nirC" + ] + ], + "dna_sequence": "ATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGTATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACCTGGCTGGGTAACCTGGTCGGTTCCGTCTTCGTTGCCATGCTCTATAGCTGGGGCGGCGGTAGCCTGCTGCCGGTAGATACCAGCATCGTTCACTCCGTCGCGCTGGCTAAAACCACTGCACCGGCAATGGTACTCTTCTTCAAAGGTGCATTGTGTAACTGGCTGGTTTGCCTGGCAATCTGGATGGCGCTGCGCACTGAAGGGGCGGCGAAATTTATCGCTATCTGGTGGTGTCTGCTGGCATTTATCGCGTCCGGCTACGAGCACTCTATCGCTAACATGACGCTGTTCGCGCTCTCCTGGTTCGGCAACCACAGCGAAGCCTACACGCTGGCGGGTATTGGTCATAACCTGCTGTGGGTGACGCTGGGTAATACTTTATCAGGTGCCGTATTCATGGGATTGGGTTATTGGTATGCTACGCCGAAAGCGAATCGTCCGGTTGCGGACAAATTTAATCAAACTGAAACGGCTGCCGGTTAA", + "dna_sequence_length": 807, + "functions": [ + "nitrite transporter" + ], + "id": "CDS_3306", + "location": [ + [ + "NC_000913", + 3497003, + "+", + 807 + ] + ], + "md5": "e41a37acae5d687764b3d0d0df815ad1", + "parent_gene": "", + "protein_md5": "60cc16d3867fddc59ceac02648228f66", + "protein_translation": "MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011010" + ], + [ + "gene_synonym", + "ECK3356" + ], + [ + "gene_synonym", + "EcoGene:EG10188" + ], + [ + "gene_synonym", + "GI:16131246" + ], + [ + "gene_synonym", + "GeneID:947880" + ], + [ + "gene_synonym", + "JW3331" + ], + [ + "gene_synonym", + "NP_417827.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEA8" + ], + [ + "gene_synonym", + "b3368" + ], + [ + "gene_synonym", + "cysG" + ] + ], + "dna_sequence": "GTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCGCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGACGGATGATGACGCGCTTAACCAGCGCGTCAGCGAAGCCGCTGAAGCTCGTCGCATCTTCTGTAACGTGGTCGATGCGCCGAAAGCCGCCAGCTTTATTATGCCGTCGATTATTGACCGCTCACCGCTCATGGTAGCGGTCTCCTCTGGCGGCACCTCTCCGGTTCTGGCACGCCTGTTGCGCGAAAAACTTGAATCACTGCTGCCGTTACATCTGGGCCAGGTAGCGAAATACGCCGGGCAATTACGCGGGCGAGTGAAACAACAGTTCGCCACGATGGGTGAGCGTCGCCGTTTCTGGGAGAAATTGTTCGTTAACGACCGCCTGGCGCAGTCGCTGGCAAACAACGATCAGAAAGCCATTACTGAAACGACCGAACAGTTAATCAACGAACCGCTCGACCATCGCGGTGAAGTGGTGCTGGTTGGTGCAGGTCCGGGCGATGCCGGGCTGCTGACACTGAAAGGACTGCAACAAATTCAGCAGGCAGATGTGGTGGTCTACGACCGTCTGGTTTCTGACGATATTATGAATCTGGTACGCCGCGATGCGGACCGTGTTTTCGTCGGCAAACGCGCGGGATACCACTGCGTACCCCAGGAAGAGATTAACCAGATCCTGCTGCGGGAAGCGCAAAAAGGCAAACGCGTGGTGCGGCTGAAAGGTGGCGATCCGTTTATTTTTGGCCGTGGTGGCGAAGAGCTGGAAACACTGTGCAACGCGGGTATTCCGTTCTCGGTGGTTCCGGGTATTACCGCAGCTTCTGGTTGCTCTGCCTATTCGGGTATTCCACTCACGCATCGCGATTATGCCCAGAGCGTACGCTTAATTACCGGACACTTAAAAACCGGTGGCGAGCTGGACTGGGAAAACCTGGCGGCAGAAAAACAGACGCTGGTGTTCTATATGGGGTTGAATCAGGCCGCGACTATTCAGCAAAAGCTGATTGAACACGGAATGCCAGGCGAAATGCCGGTGGCAATTGTCGAAAACGGTACGGCAGTCACGCAGCGCGTGATTGACGGTACGCTCACACAGCTGGGAGAACTGGCGCAGCAAATGAACAGTCCATCGCTAATTATTATTGGTCGGGTTGTTGGCCTGCGCGATAAACTGAACTGGTTCTCCAACCATTAA", + "dna_sequence_length": 1374, + "functions": [ + "fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase" + ], + "id": "CDS_3307", + "location": [ + [ + "NC_000913", + 3497828, + "+", + 1374 + ] + ], + "md5": "811c6e422ab9ff98407fa918fa31e909", + "parent_gene": "", + "protein_md5": "bcb8e161f48f6e3676da4c08055496db", + "protein_translation": "MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMGERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011016" + ], + [ + "gene_synonym", + "ECK3357" + ], + [ + "gene_synonym", + "EcoGene:EG12907" + ], + [ + "gene_synonym", + "GI:16131247" + ], + [ + "gene_synonym", + "GeneID:947879" + ], + [ + "gene_synonym", + "JW3332" + ], + [ + "gene_synonym", + "NP_417828.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64627" + ], + [ + "gene_synonym", + "b3369" + ], + [ + "gene_synonym", + "yhfL" + ] + ], + "dna_sequence": "ATGAACAAATTTATTAAAGTTGCACTGGTAGGTGCAGTACTGGCTACGTTAACTGCATGTACTGGTCATATTGAAAACCGTGATAAGAACTGCTCTTACGACTACCTGCTGCACCCGGCAATTTCTATTTCTAAAATCATTGGCGGTTGCGGTCCTACTGCACAGTAA", + "dna_sequence_length": 168, + "functions": [ + "small lipoprotein" + ], + "id": "CDS_3308", + "location": [ + [ + "NC_000913", + 3499448, + "+", + 168 + ] + ], + "md5": "a09c0db006cf2bf786abe001a55f0b44", + "parent_gene": "", + "protein_md5": "76ba5d1213b18a531b417abd1f61de8f", + "protein_translation": "MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011019" + ], + [ + "gene_synonym", + "ECK3358" + ], + [ + "gene_synonym", + "EcoGene:EG12908" + ], + [ + "gene_synonym", + "GI:90111576" + ], + [ + "gene_synonym", + "GeneID:947878" + ], + [ + "gene_synonym", + "JW3333" + ], + [ + "gene_synonym", + "NP_417829.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45539" + ], + [ + "gene_synonym", + "b3370" + ], + [ + "gene_synonym", + "frlA" + ], + [ + "gene_synonym", + "yhfM" + ] + ], + "dna_sequence": "ATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGGTTAATTGTGATCCCGCAAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATGGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTAATTACCATCGCCAAAATTATCCCGTTCACTATCGTCATTGGCCTTGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATCTCTGCCACCAGTTGGTCGTATACCGGCATGGCCTCTATCTGTTATATGACCGGCGAAATTAAAAACCCCGGAAAAACCATGCCACGAGCGCTGATTGGTTCCTGTCTGCTGGTTCTGGTGCTCTACACCCTGCTGGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGTACCAGCCGCGGCTGGAATACGCGATGGCGAAAGACAACCTGTTCTTTAAATGCTTCGGCCATGTGCATCCGAAATACAACACGCCGGATGTCTCCATCATCCTGCAAGGGGCGCTGGGGATCTTCTTCATCTTCGTTTCCGATCTCACCAGCCTGCTGGGTTATTTCACCCTGGTGATGTGTTTCAAAAATACCCTCACCTTCGGCTCCATCATCTGGTGTCGTAAACGCGACGATTACAAACCGCTGTGGCGTACTCCGGCTTTCGGGCTGATGACCACCCTCGCCATTGCGTCAAGCCTCATTCTGGTCGCCTCAACCTTTGTCTGGGCACCGATTCCCGGCCTTATCTGCGCCGTCATCGTTATTGCTACTGGTCTGCCTGCTTACGCCTTCTGGGCGAAGCGTAGCCGCCAGCTCAACGCTTTGTCGTAA", + "dna_sequence_length": 1338, + "functions": [ + "putative fructoselysine transporter" + ], + "id": "CDS_3309", + "location": [ + [ + "NC_000913", + 3499910, + "+", + 1338 + ] + ], + "md5": "c2b61afa66ab1b63fd408b16f302d593", + "parent_gene": "", + "protein_md5": "821cb6f8ab1ad95db1f740e57c0d4cc3", + "protein_translation": "MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011021" + ], + [ + "gene_synonym", + "ECK3359" + ], + [ + "gene_synonym", + "EcoGene:EG12909" + ], + [ + "gene_synonym", + "GI:162135909" + ], + [ + "gene_synonym", + "GeneID:947875" + ], + [ + "gene_synonym", + "JW5700" + ], + [ + "gene_synonym", + "NP_417830.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC00" + ], + [ + "gene_synonym", + "b3371" + ], + [ + "gene_synonym", + "frlB" + ], + [ + "gene_synonym", + "yhfN" + ] + ], + "dna_sequence": "ATGTTGGATATTGATAAAAGCACCGTGGACTTTCTGGTCACCGAAAATATGGTTCAGGAAGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAATTTAGCATTGATTATCAGGCCGACTGTATCTGGGAAATTCACCTGCTGCTCTGCTACAGCGTGGTGCTGGAGATGATCACCCGCCTCGCGCCGAACGCGGAAATCGGCAAGATCAAAAACGATCTCAAGCAGTTGCCGAATGCGCTCGGTCATCTGGTACGCACCTGGGAAGAAAAAGGCCGCCAGCTTGGTGAACTGGCCAGCCAGTGGCCGATGATTTATACCGTTGCTGCGGGTCCGCTGCGTCCGCTGGGTTACAAAGAAGGCATTGTAACGCTGATGGAATTTACCTGGACGCACGGCTGCGTGATTGAGAGCGGAGAGTTCCGCCATGGCCCGCTGGAGATTGTCGAACCGGGCGTTCCGTTCCTGTTCCTGCTCGGCAATGATGAAAGTCGCCACACCACCGAACGCGCCATTAACTTTGTTAAACAGCGTACTGACAACGTGATCGTCATCGATTACGCCGAAATTTCGCAAGGGCTGCACCCGTGGCTGGCACCGTTCCTGATGTTCGTGCCAATGGAGTGGCTCTGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAA", + "dna_sequence_length": 1023, + "functions": [ + "fructoselysine-6-P-deglycase" + ], + "id": "CDS_3310", + "location": [ + [ + "NC_000913", + 3501268, + "+", + 1023 + ] + ], + "md5": "fd6d4009bde197ab186b316e54c70afe", + "parent_gene": "", + "protein_md5": "ea34d666ba0a071439a52dc6006a78a9", + "protein_translation": "MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDIDRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDYGKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVVLEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGPLRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTERAINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYYGGLVEY", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174114" + ], + [ + "gene_synonym", + "ECK3360" + ], + [ + "gene_synonym", + "EcoGene:EG12910" + ], + [ + "gene_synonym", + "GI:49176341" + ], + [ + "gene_synonym", + "GeneID:2847758" + ], + [ + "gene_synonym", + "JW5699" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45541" + ], + [ + "gene_synonym", + "YP_026213.1" + ], + [ + "gene_synonym", + "b4474" + ], + [ + "gene_synonym", + "frlC" + ], + [ + "gene_synonym", + "yhfO" + ], + [ + "gene_synonym", + "yhfP" + ] + ], + "dna_sequence": "ATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGGCTATCCGTATAACATGATGCTGGGCGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCGTTAACGCCGTATGAATCGAACGTCGTGTGTAATGCTAATGATGTGCTTCATGCGCTGGCGCTGGTGCCTTCGCCGCGCCTGTTCAGCATGGTCGACATTTGCGCGCCGTATGTCCAGGCGGAACCGGTGATGAGTTATTTCGACAAACTGGGCGATAAATTACGTCATCTGCATATTGTCGACAGCGACGGGGCCAGCGACACGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGA", + "dna_sequence_length": 831, + "functions": [ + "fructoselysine 3-epimerase" + ], + "id": "CDS_3311", + "location": [ + [ + "NC_000913", + 3502340, + "+", + 831 + ] + ], + "md5": "c0510bd599fe42533799a7a2c0372119", + "parent_gene": "", + "protein_md5": "530cdc602134d988bdb3b09cabeab7ba", + "protein_translation": "MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011029" + ], + [ + "gene_synonym", + "ECK3361" + ], + [ + "gene_synonym", + "EcoGene:EG12912" + ], + [ + "gene_synonym", + "GI:16131252" + ], + [ + "gene_synonym", + "GeneID:947886" + ], + [ + "gene_synonym", + "JW3337" + ], + [ + "gene_synonym", + "NP_417833.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45543" + ], + [ + "gene_synonym", + "b3374" + ], + [ + "gene_synonym", + "frlD" + ], + [ + "gene_synonym", + "yhfQ" + ] + ], + "dna_sequence": "ATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATACAGCCGGGATGCATTACCTGGGTGGGTGACGATGACTACGGCACAAAGCTGAAGCAGGATCTCGCCCGCATGGGCGTCGATATCAGCCATGTCCATACGAAACACGGCGTTACCGCACAAACTCAGGTGGAACTGCACGACAATGATCGCGTTTTTGGCGACTACACCGAAGGCGTGATGGCCGACTTTGCCCTGAGTGAAGAGGATTACGCCTGGCTGGCGCAGTATGACATTGTGCACGCGGCAATCTGGGGACATGCGGAAGACGCATTCCCACAGCTGCACGCTGCGGGCAAACTTACCGCTTTCGACTTCTCCGACAAGTGGGACAGCCCGCTCTGGCAGACACTGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGGATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAG", + "dna_sequence_length": 786, + "functions": [ + "fructoselysine 6-kinase" + ], + "id": "CDS_3312", + "location": [ + [ + "NC_000913", + 3503167, + "+", + 786 + ] + ], + "md5": "eae05a568e4ccd6746bb18e67da3a783", + "parent_gene": "", + "protein_md5": "5f5d0186ba0c998b0b1dc84397271212", + "protein_translation": "MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVIDTMGAGDSFIAGFLCGWSAGMTLPQAIAQGTACAAKTIQYHGAW", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011031" + ], + [ + "gene_synonym", + "ECK3362" + ], + [ + "gene_synonym", + "EcoGene:EG12913" + ], + [ + "gene_synonym", + "GI:162135910" + ], + [ + "gene_synonym", + "GeneID:947885" + ], + [ + "gene_synonym", + "JW5698" + ], + [ + "gene_synonym", + "NP_417834.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45544" + ], + [ + "gene_synonym", + "b3375" + ], + [ + "gene_synonym", + "frlR" + ], + [ + "gene_synonym", + "yhfR" + ] + ], + "dna_sequence": "ATGTCAGCTACGGACCGCTACTCTCATCAACTCCTCTACGCTACCGTCCGCCAGCGACTGCTGGATGATATCGCGCAGGGGGTTTACCAGGCCGGGCAACAGATCCCTACCGAAAACGAGCTTTGTACACAATATAACGTCAGCCGCATTACCATTCGCAAAGCCATCAGCGACTTAGTGGCAGACGGCGTACTGATCCGCTGGCAGGGAAAAGGCACCTTTGTACAAAGCCAGAAAGTTGAAAACGCCCTGCTTACTGTCAGTGGTTTTACCGATTTTGGCGTCTCACAAGGCAAGGCGACGAAAGAGAAAGTGATCGAACAGGAACGGGTCAGCGCCGCGCCGTTTTGCGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACGTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGAACCGTTGTTTCGCATCAGCAAAATCGCCTTTGATCAGAATGACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAA", + "dna_sequence_length": 732, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3313", + "location": [ + [ + "NC_000913", + 3504052, + "+", + 732 + ] + ], + "md5": "bd550da243ad1f4c8bc24280fd8afb6d", + "parent_gene": "", + "protein_md5": "d12522e698b144b338e9a7eb3c211fed", + "protein_translation": "MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITLTIDNKRH", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011035" + ], + [ + "gene_synonym", + "ECK3363" + ], + [ + "gene_synonym", + "EcoGene:EG12914" + ], + [ + "gene_synonym", + "GI:16131254" + ], + [ + "gene_synonym", + "GeneID:947884" + ], + [ + "gene_synonym", + "JW3339" + ], + [ + "gene_synonym", + "NP_417835.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45545" + ], + [ + "gene_synonym", + "b3376" + ], + [ + "gene_synonym", + "yhfS" + ] + ], + "dna_sequence": "ATGAAGACGTTTCCTCTGCAAAGCCTGACGATTATTGAGGCGCAGCAAAAGCAGTTTGCGCTGGTGGATAGCATTTGTCGCCATTTCCCCGGCAGCGAGTTTCTTACTGGCGGTGATTTAGGCTTAACGCCAGGACTGAATCAACCGCGCGTTACCCAGCGTGTGGAACAGGTGCTGGCTGATGCATTTCACGCACAGGCTGCGGCGCTGGTGCAGGGCGCGGGGACTGGCGCGATTCGCGCCGGGCTGGCGGCTTTGCTCAAACCGGGGCAGCGTCTTCTGGTGCATGACGCGCCTGTTTACCCGACGACACGGGTTATTATTGAGCAGATGGGGCTGACGCTTATTACTGTTGATTTCAATGACCTGTCGGCACTGAAGCAGGTCGTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCAACGTTGCGCGCGGCAGGTGTTCCAGCGTTAACCGATGACAACTATGCGGTGATGAAGGTGGCTCGAATCGGCTGTGAATGCGGCGCGAATGTCTCGACATTTTCCTGCTTCAAGCTATTTGGGCCAGAGGGTGTTGGTGCAGTGGTCGGCGATGCTGATGTTATCAACCGTATTCGCGCCACGCTTTACTCCGGCGGTAGCCAGATCCAGGGCGCACAGGCGCTGGAAGTATTGCGTGGTCTGGTGTTTGCGCCAGTGATGCACGCGGTGCAGGCAGGGGTATCTGAACGGTTGCTGGCTTTGCTTAACGGTGGTGCGGTGCCGGAAGTGAAAAGCGCGGTGATTGCTAATGCGCAGTCGAAGGTGTTGATTGTCGAGTTTCATCAGCCGATTGCCGCCAGAGTGCTGGAAGAGGCGCAAAAGCGCGGTGCCTTGCCTTACCCGGTGGGTGCAGAGTCGAAATATGAAATCCCGCCGCTCTTTTATCGCCTTTCCGGAACGTTTCGCCAGGCGAATCCACAATCAGAACATTGTGCGATTCGCATTAACCCGAATCGCAGCGGTGAAGAGACGGTGCTGCGGATTTTGCGTGAGAGTATTGCCAGTATTTAA", + "dna_sequence_length": 1086, + "functions": [ + "FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein" + ], + "id": "CDS_3314", + "location": [ + [ + "NC_000913", + 3506020, + "-", + 1086 + ] + ], + "md5": "cee3610f981eaa1f9c7213afea56fd56", + "parent_gene": "", + "protein_md5": "74e62bf8366611b8b60fe56671f7a114", + "protein_translation": "MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLVFAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIASI", + "protein_translation_length": 361, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011037" + ], + [ + "gene_synonym", + "ECK3364" + ], + [ + "gene_synonym", + "EcoGene:EG12915" + ], + [ + "gene_synonym", + "GI:16131255" + ], + [ + "gene_synonym", + "GeneID:947883" + ], + [ + "gene_synonym", + "JW3340" + ], + [ + "gene_synonym", + "NP_417836.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45546" + ], + [ + "gene_synonym", + "b3377" + ], + [ + "gene_synonym", + "yhfT" + ] + ], + "dna_sequence": "ATGGATCTGTATATTCAGATTATCGTGGTGGCGTGCCTGACGGGTATGACATCGCTTCTGGCGCATCGCTCGGCGGCTGTTTTTCATGACGGCATCCGCCCGATCCTGCCGCAACTGATTGAAGGCTATATGAACCGTCGCGAGGCGGGGAGTATCGCTTTTGGTCTGAGCATTGGTTTTGTGGCCTCGGTGGGGATCTCTTTTACCCTGAAAACCGGGCTGCTCAACGCATGGTTACTCTTTCTTCCTACCGATATCCTCGGCGTCCTGGCGATAAACAGCCTGATGGCGTTTGGTCTTGGCGCTATCTGGGGCGTGTTGATCCTTACTTGCCTGTTGCCAGTAAACCAGCTGCTGACCGCGCTGCCGGTGGATGTATTAGGTAGCCTGGGGGAATTAAGCTCGCCGGTGGTTTCAGCTTTTGCACTGTTCCCGCTGGTGGCGATTTTCTACCAGTTTGGCTGGAAGCAAAGTCTGATCGCCGCCGTGGTGGTACTGATGACCCGTGTGGTAGTCGTGCGCTATTTCCCACATCTTAACCCTGAATCCATCGAAATCTTTATTGGCATGGTGATGCTGCTGGGGATCGCGATAACTCACGACCTGCGTCATCGTGATGAAAATGACATTGATGCCAGCGGGCTTTCGGTGTTTGAAGAACGCACGTCACGGATTATCAAAAACTTACCCTATATCGCCATCGTGGGAGCATTGATTGCCGCCGTTGCCAGCATGAAGATTTTTGCTGGCAGTGAAGTGTCGATCTTCACACTGGAGAAAGCATATTCCGCAGGCGTAACGCCGGAACAATCGCAAACGCTGATTAATCAGGCGGCTCTGGCAGAATTTATGCGCGGACTGGGGTTTGTGCCGTTGATTGCCACCACCGCGTTAGCAACGGGTGTGTATGCAGTTGCGGGCTTTACCTTTGTTTATGCGGTGGACTATCTCTCGCCGAATCCGATGGTTGCAGCGGTATTAGGCGCAGTGGTTATTTCGGCGGAAGTCTTGCTGCTTCGTTCGATCGGCAAATGGCTGGGACGCTACCCGTCGGTGCGTAATGCGTCGGATAACATCCGTAACGCCATGAATATGCTGATGGAAGTGGCGCTGCTGGTCGGTTCGATTTTCGCAGCAATTAAGATGGCGGGTTATACCGGATTCTCTATCGCGGTTGCCATTTACTTCCTCAACGAATCCCTGGGCCGTCCGGTACAGAAAATGGCGGCACCGGTCGTGGCAGTAATGATCACCGGTATTCTGCTGAATGTTCTTTACTGGCTTGGCCTGTTCGTTCCGGCTTAA", + "dna_sequence_length": 1305, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_3315", + "location": [ + [ + "NC_000913", + 3507336, + "-", + 1305 + ] + ], + "md5": "f5c4da93e857551912b7e8ee3d2b43f9", + "parent_gene": "", + "protein_md5": "b9e8ce3771e4cd3d3122371a39c6e97f", + "protein_translation": "MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011041" + ], + [ + "gene_synonym", + "ECK3365" + ], + [ + "gene_synonym", + "EcoGene:EG12916" + ], + [ + "gene_synonym", + "GI:90111579" + ], + [ + "gene_synonym", + "GeneID:947892" + ], + [ + "gene_synonym", + "JW5697" + ], + [ + "gene_synonym", + "NP_417837.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64631" + ], + [ + "gene_synonym", + "b3378" + ], + [ + "gene_synonym", + "yhfU" + ] + ], + "dna_sequence": "ATGAAAAAGATTGGCGTTGCAGGCTTACAGCGTGAGCAGATTAAAAAAACTATTGAAGCGACGGCTCCTGGCTGTTTTGAAGTTTTCATTCACAACGACATGGAAGCGGCAATGAAGGTGAAATCCGGGCAACTGGATTATTACATCGGCGCGTGTAATACCGGTGCGGGCGCGGCATTGTCGATTGCCATCGCGGTGATAGGCTATAACAAAAGTTGCACCATTGCCAAACCAGGCATTAAAGCGAAAGACGAGCATATCGCCAAAATGATCGCTGAAGGAAAAGTGGCGTTTGGCCTTTCCGTTGAGCACGTCGAACACGCGATTCCGATGCTGATTAACCATCTGAAATAA", + "dna_sequence_length": 354, + "functions": [ + "DUF2620 family protein" + ], + "id": "CDS_3316", + "location": [ + [ + "NC_000913", + 3507701, + "-", + 354 + ] + ], + "md5": "adf29542b3abb31e5f69988bfbd81fb2", + "parent_gene": "", + "protein_md5": "1e11ef72011f96bc70cbc16ae9f712a8", + "protein_translation": "MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011044" + ], + [ + "gene_synonym", + "ECK3366" + ], + [ + "gene_synonym", + "EcoGene:EG12917" + ], + [ + "gene_synonym", + "GI:16131257" + ], + [ + "gene_synonym", + "GeneID:947891" + ], + [ + "gene_synonym", + "JW3342" + ], + [ + "gene_synonym", + "NP_417838.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45548" + ], + [ + "gene_synonym", + "b3379" + ], + [ + "gene_synonym", + "php" + ], + [ + "gene_synonym", + "yhfV" + ] + ], + "dna_sequence": "ATGAGTTTTGATCCGACGGGTTACACCCTCGCCCATGAGCATCTGCATATTGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGGCGCAATGCGCAATTTATGCTTGATGTAATGCGCGAGACGGGGATCAACGTGGTGGCCTGTACCGGTTATTACCAGGACGCGTTTTTCCCGGAACATGTGGCGACCCGCAGCGTGCAGGAACTGGCGCAGGAGATGGTCGATGAAATTGAACAGGGTATCGATGGCACGGAGCTGAAAGCCGGGATCATCGCGGAGATCGGCACCAGCGAAGGAAAGATTACGCCGCTGGAAGAGAAGGTATTTATTGCCGCTGCGCTGGCGCATAACCAGACCGGACGCCCGATCTCCACGCATACGTCGTTCAGCACGATGGGGCTGGAGCAACTGGCGTTGCTACAAGCCCACGGGGTTGATCTTTCGCGCGTCACCGTTGGTCACTGCGATCTGAAAGACAACCTCGACAACATTTTGAAGATGATCGATCTCGGCGCGTACGTGCAGTTCGACACCATCGGCAAGAACAGTTACTACCCGGACGAAAAGCGTATTGCGATGCTTCATGCGCTACGCGACCGTGGGTTGCTGAACCGCGTCATGCTGTCGATGGATATTACGCGCCGCTCCCATTTAAAAGCCAACGGTGGTTATGGCTATGACTATTTACTAACCACCTTTATTCCGCAATTGCGCCAGTCAGGATTCAGTCAGGCCGATGTGGATGTGATGTTACGTGAAAATCCCTCTCAATTTTTCCAATAA", + "dna_sequence_length": 879, + "functions": [ + "phosphotriesterase homology protein" + ], + "id": "CDS_3317", + "location": [ + [ + "NC_000913", + 3508590, + "-", + 879 + ] + ], + "md5": "a308bd2341eb356a5970d248dd36579b", + "parent_gene": "", + "protein_md5": "a8ef44a29f44685332f14f72e4cdc24b", + "protein_translation": "MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011046" + ], + [ + "gene_synonym", + "ECK3367" + ], + [ + "gene_synonym", + "EcoGene:EG12918" + ], + [ + "gene_synonym", + "GI:16131258" + ], + [ + "gene_synonym", + "GeneID:947890" + ], + [ + "gene_synonym", + "JW3343" + ], + [ + "gene_synonym", + "NP_417839.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45549" + ], + [ + "gene_synonym", + "b3380" + ], + [ + "gene_synonym", + "yhfW" + ] + ], + "dna_sequence": "ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGCTGGTGCGTCCGCAAGATGCGGGAGCGAATACATGTGGTCACATCCTGAGCCAGTTGCCGCATTTGCAGCTACCAACGCTGGAGACGCTGGGGCTAATCAACGCATTGGGTTATGCGCCAGGCGATATGCAGCCGTCAGATTCCGCAACCTGGGGCGTGGCAGAGCTGCAACATGAAGGTGGCGATACCTTTATGGGGCATCAGGAAATTTTAGGCACGCGCCCGTTACCGCCGCTGCGGATGCCTTTTCGCGATGTGATTGACCGTGTTGAGCAGGCATTAGTTTCCGCTGGCTGGCAGGTGGAGCGCCGTGGCGATGATCTGCAATTTCTGTGGGTCAATCAGGCGGTTGCGATTGGCGATAATCTCGAGGCGGATTTAGGCCAGGTCTATAACATTACCGCCAATCTCTCTGTGATCTCTTTTGACGACGCAATCAAAATTGGTCGTATCGTGCGTGAGCAGGTACAGGTCGGTCGGGTCATTACATTTGGTGGCCTGTTAACCGACAGTCAACGCATTCTCGATGCCGCAGAAAGCAAAGAAGGGCGCTTTATTGGTATCAATGCGCCGCGTTCTGGCGCTTATGACAACGGTTTCCAGGTCGTGCATATGGGCTATGGCGTCGATGAAAAAGTGCAGGTGCCACAAAAACTGTATGAAGCAGGCGTGCCAACCGTGCTGGTGGGTAAGGTGGCAGATATCGTCAACAATCCTTATGGCGTGAGCTGGCAAAATCTGGTGGATAGCCAGCGGATTATGGATATCACCCTCAACGAATTTAACACCCATCCGACGGCGTTTATTTGCACCAACATTCAGGAAACCGACCTCGCTGGTCATGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTTGCCCGGCTTGTTGAGGCGATGCAGCCAGATGATTGCCTGGTCGTGATGGCGGATCACGGCAACGATCCGACCATTGGTCACAGCCACCATACCCGCGAAGTGGTGCCAGTGCTGGTTTATCAGCAAGGGATGATCGCTACGCAGCTCGGTGTGCGCACCACGCTTTCTGATGTGGGGGCTACCGTGTGTGAATTTTTCCGCGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTCCCTCCGGTTTGCAGGAGACACCCTATGA", + "dna_sequence_length": 1227, + "functions": [ + "phosphopentomutase-related metalloenzyme superfamily protein" + ], + "id": "CDS_3318", + "location": [ + [ + "NC_000913", + 3509813, + "-", + 1227 + ] + ], + "md5": "38546a3bcaecd2606a1f5d50ae3ab5d6", + "parent_gene": "", + "protein_md5": "7e7747d1b67a6c3ab2239cc864517c55", + "protein_translation": "MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011048" + ], + [ + "gene_synonym", + "ECK3368" + ], + [ + "gene_synonym", + "EcoGene:EG12919" + ], + [ + "gene_synonym", + "GI:16131259" + ], + [ + "gene_synonym", + "GeneID:947889" + ], + [ + "gene_synonym", + "JW3344" + ], + [ + "gene_synonym", + "NP_417840.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45550" + ], + [ + "gene_synonym", + "b3381" + ], + [ + "gene_synonym", + "yhfX" + ] + ], + "dna_sequence": "ATGTTTGTAGAAGCATTGAAACGCCAGAACCCGGCGCTGATTTCCGCCGCACTAAGCCTGTGGCAGCAGGGCAAGATCGCCCCGGACAGCTGGGTGATCGACGTGGATCAGATACTGGAAAACGGTAAGCGGCTGATTGAGACGGCGCGGCTTTACGGCATTGAACTGTATCTGATGACCAAGCAGTTTGGTCGTAATCCGTGGCTGGCGGAAAAATTGCTGGCATTAGGCTACAGCGGCATTGTGGCGGTGGATTACAAAGAGGCGCGAGTCATGCGCCGCGCTGGTTTGCCTGTGGCGCATCAGGGGCATCTGGTACAAATCCCTTGTCATCAGGTTGCTGACGCCGTTGAACAGGGCACCGACGTCATCACCGTGTTTACTCTCGACAAAGCGCGGGAAGTTTCTGCGGCGGCGGTGAAGGCCGGGCGAATCCAGTCTGTGCTGCTTAAAGTTTATAGCGACGATGATTTTCTTTATCCGGGCCAGGAGAGCGGTTTTGCCCTCAAGGTGTTGCCGGAGATTGTCGCCGAAATCCAGAATCTGCCAGGGCTGCATTTAGCCGGACTTACCCATTTCCCTTGCCTGCTTTGGGATGAGGCTGTCGGAAAAGTTTTGCCGACACCGAATCTTCACACGCTGATACAGGCACGGGATCAACTGGCGAAATCTGGTATTGCACTTGAGCAACTGAACGCGCCTTCAGCGACCAGCTGCACTTCGCTGCCATTACTGGCGCAATACGGTGTGACTCATGCCGAACCCGGTCATGCGCTGACGGGCACTATTCCGGCAAACCAGCAGGGCGATCAGCCTGAACGTATCGCGATGCTCTGGTTAAGTGAAATCTCCCATCATTTCCGTGGCGACAGCTACTGCTACGGCGGCGGTTACTATCGTCGTGGTCATGCGCAACATGCGTTGGTGTTTACGCCAGAAAATCAAAAGATTACTGAAACCAATCTCAAAACTGTGGATGACAGCAGTATCGACTACACCCTGCCGCTGGCAGGCGAGTTTCCGGTAAGCAGTGCAGTGGTGCTCTGTTTTCGCACGCAGATTTTTGTCACCCGTAGCGATGTGGTGCTGGTGTCCGGTATTCATCGTGGCGAACCGGAAATCGTCGGTCGTTATGACAGTCTTGGAAACTCTCTGGGGGCGTAA", + "dna_sequence_length": 1164, + "functions": [ + "putative pyridoxal 5'-phosphate binding protein" + ], + "id": "CDS_3319", + "location": [ + [ + "NC_000913", + 3510976, + "-", + 1164 + ] + ], + "md5": "d04c4faf1f2d484ff03daa10cbebc40a", + "parent_gene": "", + "protein_md5": "44274bafa774968da5ecadb8fefff603", + "protein_translation": "MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011050" + ], + [ + "gene_synonym", + "ECK3369" + ], + [ + "gene_synonym", + "EcoGene:EG12920" + ], + [ + "gene_synonym", + "GI:90111580" + ], + [ + "gene_synonym", + "GeneID:947888" + ], + [ + "gene_synonym", + "JW5696" + ], + [ + "gene_synonym", + "NP_417841.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45551" + ], + [ + "gene_synonym", + "b3382" + ], + [ + "gene_synonym", + "yhfY" + ] + ], + "dna_sequence": "ATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGATGCAGGTCGTCAACGTACTGGAAACAGAGTGCCATCTGCCGGTGCGCAGTGAGCAAGGAACGATGGCGATGACACATATGGCGAGTGCACTGATGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAGTTGCTGGCAGAACTGGCGCAATCCAGCCACTGGCAAGCCGTTGTGCAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAACCCGTGTGAAGAAGGCTATTTGCTGGCCAACCTTTATGGATTATGGATGGCTGCTAACGAAGAGGTTTGA", + "dna_sequence_length": 363, + "functions": [ + "PRD domain protein" + ], + "id": "CDS_3320", + "location": [ + [ + "NC_000913", + 3511422, + "-", + 363 + ] + ], + "md5": "2f76b63ba6ea59a3af36e3d4bda6eccf", + "parent_gene": "", + "protein_md5": "6a08bdde1ce1a7aea4f29bc619d2f285", + "protein_translation": "METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011052" + ], + [ + "gene_synonym", + "ECK3370" + ], + [ + "gene_synonym", + "EcoGene:EG12921" + ], + [ + "gene_synonym", + "GI:49176343" + ], + [ + "gene_synonym", + "GeneID:947897" + ], + [ + "gene_synonym", + "JW5948" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45552" + ], + [ + "gene_synonym", + "YP_026214.1" + ], + [ + "gene_synonym", + "b3383" + ], + [ + "gene_synonym", + "yhfZ" + ] + ], + "dna_sequence": "ATGCGTCGAACGTTTATCAAAAAAGAAGGCGTCGTCATCACGACGCTGGCCCGTTATTTGTTGGGTGAAAAGTGCGGTAATCGATTGAAAACCATAGATGAGCTGGCAAATGAATGCCGTTCATCCGTTGGCCTGACGCAGGCCGCGTTGAAAACGCTGGAATCAAGCGGAGCGATACGGATTGAACGCCGTGGGCGCAATGGCAGTTATCTGGTCGAGATGGATAACAAAGCATTGCTGACTCATGTGGATATCAACAACGTGGTATGTGCAATGCCCTTGCCCTATACCCGTTTGTACGAAGGCCTGGCGAGCGGATTGAAAGCCCAGTTTGATGGCATTCCTTTTTACTATGCGCACATGCGTGGCGCGGATATTCGCGTGGAGTGTCTGCTTAATGGCGTGTATGACATGGCGGTGGTTTCGCGACTAGCGGCGGAAAGTTATCTCACGCAAAAAGGCTTATGCCTCGCGCTGGAGTTGGGGCCGCACACCTACGTTGGCGAGCACCAGTTGATTTGCCGTAAAGGCGAGTCCGCAAACGTGAAGCGCGTGGGGCTGGATAACCGTTCGGCGGATCAGAAAATCATGACCGATGTTTTTTTTGGCGGTAGTGATGTGGAACGAGTCGATCTCTCTTATCACGAGAGTTTACAACGCATTGTTAAAGGCGATGTCGATGCGGTGATCTGGAACGTGGTGGCGGAAAACGAACTGACCATGCTGGGATTAGAGGCGACGCCGCTCACAGACGATCCGCGATTTTTACAGGCCACCGAAGCCGTGGTCCTGACGCGAGTCGATGATTACCCAATGCAACAACTGCTGCGTGCCGTTGTAGATAAACACGCCCTGCTCGCCCATCAACAACGGGTAGTGAGTGGGGAACAGGAACCGAGTTATTAA", + "dna_sequence_length": 906, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3321", + "location": [ + [ + "NC_000913", + 3512344, + "-", + 906 + ] + ], + "md5": "7ee76cf279ea8d4eb34de9dd7f6dc9f2", + "parent_gene": "", + "protein_md5": "f4f0bd0fc18755dfb4b9f1720de8b0b1", + "protein_translation": "MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELANECRSSVGLTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLTHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALELGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPSY", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011056" + ], + [ + "gene_synonym", + "ECK3371" + ], + [ + "gene_synonym", + "EcoGene:EG11030" + ], + [ + "gene_synonym", + "GI:16131262" + ], + [ + "gene_synonym", + "GeneID:947894" + ], + [ + "gene_synonym", + "JW3347" + ], + [ + "gene_synonym", + "NP_417843.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00954" + ], + [ + "gene_synonym", + "b3384" + ], + [ + "gene_synonym", + "trpS" + ] + ], + "dna_sequence": "ATGACTAAGCCCATCGTTTTTAGTGGCGCACAGCCCTCAGGTGAATTGACCATTGGTAACTACATGGGTGCGCTGCGTCAGTGGGTAAACATGCAGGATGACTACCATTGCATTTACTGTATCGTTGACCAACACGCGATCACCGTGCGCCAGGATGCACAGAAGCTGCGTAAAGCGACGCTGGATACGCTGGCCTTGTATCTGGCTTGTGGTATCGATCCTGAGAAAAGCACCATTTTTGTTCAGTCCCACGTGCCGGAACATGCACAGTTAGGCTGGGCACTGAACTGCTATACCTACTTCGGCGAACTGAGTCGCATGACGCAGTTTAAAGATAAATCTGCGCGTTATGCCGAGAACATCAACGCTGGTCTGTTTGACTATCCGGTGCTGATGGCAGCGGACATCCTGCTGTATCAAACTAATCTGGTACCGGTGGGTGAAGACCAGAAACAGCACCTCGAACTGAGCCGCGATATTGCCCAGCGTTTCAACGCGCTGTATGGCGAGATCTTTAAGGTGCCGGAGCCGTTTATTCCGAAATCTGGCGCGCGCGTAATGTCGCTGCTGGAGCCGACCAAGAAGATGTCCAAGTCTGACGATAATCGCAATAACGTTATCGGCCTGCTGGAAGATCCGAAATCGGTAGTGAAGAAAATCAAACGTGCGGTCACTGACTCCGACGAGCCGCCGGTAGTTCGCTACGATGTGCAGAACAAAGCGGGCGTTTCCAACCTGTTGGATATCCTTTCAGCGGTAACGGGCCAGAGCATCCCAGAACTGGAAAAACAGTTCGAAGGCAAGATGTATGGTCATCTGAAAGGTGAAGTGGCTGATGCCGTTTCCGGTATGCTGACTGAATTGCAGGAACGCTATCACCGTTTCCGCAACGATGAAGCCTTCCTGCAACAGGTGATGAAAGATGGCGCGGAAAAAGCCAGCGCGCACGCTTCCCGTACGCTAAAAGCGGTGTACGAAGCGATTGGTTTTGTGGCGAAGCCGTAA", + "dna_sequence_length": 1005, + "functions": [ + "tryptophanyl-tRNA synthetase" + ], + "id": "CDS_3322", + "location": [ + [ + "NC_000913", + 3513638, + "-", + 1005 + ] + ], + "md5": "6deb3ddf48e86c11a5be29bbea920c8a", + "parent_gene": "", + "protein_md5": "96efecbb175fa71e17b4badca3f602a9", + "protein_translation": "MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011058" + ], + [ + "gene_synonym", + "ECK3372" + ], + [ + "gene_synonym", + "EcoGene:EG11871" + ], + [ + "gene_synonym", + "GI:16131263" + ], + [ + "gene_synonym", + "GeneID:947895" + ], + [ + "gene_synonym", + "JW3348" + ], + [ + "gene_synonym", + "NP_417844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32662" + ], + [ + "gene_synonym", + "b3385" + ], + [ + "gene_synonym", + "gph" + ], + [ + "gene_synonym", + "yhfE" + ] + ], + "dna_sequence": "ATGAATAAGTTTGAAGATATTCGCGGCGTCGCTTTTGATCTTGATGGTACGCTGGTCGACAGTGCTCCTGGTCTTGCTGCTGCGGTAGATATGGCGCTGTATGCGCTGGAGTTGCCCGTCGCAGGTGAAGAACGCGTTATTACCTGGATTGGTAACGGCGCAGATGTTCTGATGGAGCGCGCATTGACCTGGGCGCGTCAGGAACGTGCGACTCAGCGTAAAACAATGGGTAAACCGCCCGTTGATGACGACATTCCGGCAGAAGAACAGGTACGTATTCTGCGTAAACTGTTCGATCGCTACTATGGCGAGGTTGCCGAAGAGGGGACGTTTTTGTTCCCGCACGTTGCCGATACGTTGGGCGCGTTGCAGGCTAAAGGCCTGCCGCTAGGCCTGGTCACCAACAAACCGACGCCGTTCGTCGCGCCGCTGCTCGAAGCCTTAGATATCGCCAAATACTTCAGCGTGGTGATTGGTGGTGATGATGTGCAAAACAAAAAACCGCATCCGGACCCGCTGTTACTGGTGGCTGAGCGGATGGGAATTGCCCCACAACAGATGCTGTTTGTCGGCGACTCACGCAATGATATTCAGGCGGCAAAAGCGGCAGGTTGCCCATCAGTTGGCTTAACCTACGGATATAACTACGGCGAGGCTATCGATCTCAGCCAGCCTGATGTAATTTATCAGTCTATAAATGACCTTCTGCCCGCATTAGGGCTTCCGCATAGCGAAAATCAGGAATCGAAAAATGACTAA", + "dna_sequence_length": 759, + "functions": [ + "phosphoglycolate phosphatase" + ], + "id": "CDS_3323", + "location": [ + [ + "NC_000913", + 3514389, + "-", + 759 + ] + ], + "md5": "915f157a0db9b01d07cc68ca4d1b08ee", + "parent_gene": "", + "protein_md5": "ef67ea99c525d497a3fe15ec7457e0af", + "protein_translation": "MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011061" + ], + [ + "gene_synonym", + "ECK3373" + ], + [ + "gene_synonym", + "EcoGene:EG11960" + ], + [ + "gene_synonym", + "GI:16131264" + ], + [ + "gene_synonym", + "GeneID:947896" + ], + [ + "gene_synonym", + "JW3349" + ], + [ + "gene_synonym", + "NP_417845.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG07" + ], + [ + "gene_synonym", + "b3386" + ], + [ + "gene_synonym", + "dod" + ], + [ + "gene_synonym", + "rpe" + ], + [ + "gene_synonym", + "yhfD" + ] + ], + "dna_sequence": "ATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCGCCTGGGTGAAGATACCGCAAAAGCCCTGGCAGCTGGCGCTGATGTCGTGCATTTTGACGTCATGGATAACCACTATGTTCCCAATCTGACGATTGGGCCAATGGTGCTGAAATCCTTGCGTAACTATGGCATTACCGCCCCTATCGACGTACACCTGATGGTGAAACCCGTCGATCGCATTGTGCCTGATTTCGCTGCCGCTGGTGCCAGCATCATTACCTTTCATCCAGAAGCCTCCGAGCATGTTGACCGCACGCTGCAACTGATTAAAGAAAATGGCTGTAAAGCGGGTCTGGTATTTAACCCGGCGACACCTCTGAGCTATCTGGATTACGTGATGGATAAGCTGGATGTGATCCTGCTGATGTCCGTCAACCCTGGTTTCGGCGGTCAGTCTTTCATTCCTCAAACACTGGATAAACTGCGCGAAGTACGTCGCCGTATCGACGAGTCTGGCTTTGACATTCGACTAGAAGTGGACGGTGGCGTGAAGGTGAACAACATTGGCGAAATCGCTGCGGCGGGCGCGGATATGTTCGTCGCCGGTTCGGCAATCTTCGACCAGCCAGACTACAAAAAAGTCATTGATGAAATGCGCAGTGAACTGGCAAAGGTAAGTCATGAATAA", + "dna_sequence_length": 678, + "functions": [ + "D-ribulose-5-phosphate 3-epimerase" + ], + "id": "CDS_3324", + "location": [ + [ + "NC_000913", + 3515059, + "-", + 678 + ] + ], + "md5": "9a9e1e17fbf2f0a7c4386e12c58c3716", + "parent_gene": "", + "protein_md5": "ad64cec4eb7f19a532f05cb4e3f501d8", + "protein_translation": "MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011063" + ], + [ + "gene_synonym", + "ECK3374" + ], + [ + "gene_synonym", + "EcoGene:EG10204" + ], + [ + "gene_synonym", + "GI:16131265" + ], + [ + "gene_synonym", + "GeneID:947893" + ], + [ + "gene_synonym", + "JW3350" + ], + [ + "gene_synonym", + "NP_417846.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEE8" + ], + [ + "gene_synonym", + "b3387" + ], + [ + "gene_synonym", + "dam" + ] + ], + "dna_sequence": "ATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGGCATTTGCCCAAGGGCGAATGTCTGGTTGAGCCTTTTGTAGGTGCCGGGTCGGTGTTTCTCAACACCGACTTTTCTCGTTATATCCTTGCCGATATCAATAGCGACCTGATCAGTCTCTATAACATTGTGAAGATGCGTACTGATGAGTACGTACAGGCCGCACGCGAGCTGTTTGTTCCCGAAACAAATTGCGCCGAGGTTTACTATCAGTTCCGCGAAGAGTTCAACAAAAGCCAGGATCCGTTCCGTCGGGCGGTACTGTTTTTATATTTGAACCGCTACGGTTACAACGGCCTGTGTCGTTACAATCTGCGCGGTGAGTTTAACGTGCCGTTCGGCCGCTACAAAAAACCCTATTTCCCGGAAGCAGAGTTGTATCACTTCGCTGAAAAAGCGCAGAATGCCTTTTTCTATTGTGAGTCTTACGCCGATAGCATGGCGCGCGCAGATGATGCATCCGTCGTCTATTGCGATCCGCCTTATGCACCGCTGTCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGATCTCCAATCACGATACGATGTTAACGCGTGAGTGGTATCAGCGCGCAAAATTGCATGTCGTCAAAGTTCGACGCAGTATAAGCAGCAACGGCGGCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAA", + "dna_sequence_length": 837, + "functions": [ + "DNA adenine methyltransferase" + ], + "id": "CDS_3325", + "location": [ + [ + "NC_000913", + 3515913, + "-", + 837 + ] + ], + "md5": "7cf6f8730736011e765cb1032bc7caff", + "parent_gene": "", + "protein_md5": "9d29e4d27cde298dc7ac3ca3090bf9f1", + "protein_translation": "MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011065" + ], + [ + "gene_synonym", + "ECK3375" + ], + [ + "gene_synonym", + "EcoGene:EG11183" + ], + [ + "gene_synonym", + "GI:16131266" + ], + [ + "gene_synonym", + "GeneID:947930" + ], + [ + "gene_synonym", + "JW3351" + ], + [ + "gene_synonym", + "NP_417847.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11557" + ], + [ + "gene_synonym", + "b3388" + ], + [ + "gene_synonym", + "damX" + ], + [ + "gene_synonym", + "yhfB" + ] + ], + "dna_sequence": "ATGGATGAATTCAAACCAGAAGACGAGCTGAAACCCGATCCCAGCGATCGTCGTACTGGTCGTTCTCGTCAATCTTCTGAACGTTCTGAGCGTACTGAACGTGGCGAACCGCAGATCAATTTTGATGATATTGAACTTGATGACACTGACGATCGCCGTCCGACTCGTGCGCAAAAAGAGCGCAATGAGGAACCGGAAATCGAAGAAGAAATTGACGAATCCGAAGATGAAACCGTGGATGAAGAGCGCGTAGAGCGTCGTCCGCGTAAGCGCAAAAAAGCAGCCAGTAAACCCGCTTCTCGTCAGTATATGATGATGGGCGTCGGCATTCTGGTTCTACTGCTGTTGATCATCGGTATCGGTTCTGCGCTAAAAGCCCCCTCGACCACTTCCAGCGATCAAACCGCGTCTGGCGAGAAGAGTATTGATCTTGCTGGCAATGCGACCGATCAGGCGAATGGCGTGCAGCCAGCGCCGGGAACCACGTCTGCGGAAAATACTCAGCAGGATGTTTCTCTGCCACCGATCTCTTCTACGCCGACTCAAGGGCAAACCCCGGTGGCAACGGATGGTCAACAACGTGTTGAAGTGCAGGGTGACCTGAACAATGCGCTGACCCAGCCACAAAATCAGCAACAGCTGAACAATGTGGCGGTCAATTCCACGTTGCCGACTGAACCCGCAACGGTTGCGCCTGTTCGCAATGGCAATGCATCGCGTGACACGGCGAAAACGCAAACCGCTGAACGTCCGTCCACTACGCGCCCAGCTCGTCAGCAGGCGGTGATTGAACCGAAAAAACCGCAAGCAACCGTGAAAACGGAGCCGAAGCCGGTAGCACAGACGCCGAAGCGTACTGAACCAGCTGCCCCTGTGGCGAGCACGAAGGCACCGGCTGCGACTTCTACGCCAGCACCAAAAGAGACGGCGACTACGGCTCCAGTACAGACGGCATCCCCGGCGCAAACCACAGCAACACCCGCTGCTGGGGCGAAGACCGCAGGTAATGTTGGTTCGTTGAAATCGGCACCGTCCAGCCATTACACTCTGCAGCTGAGCAGTTCCTCTAACTACGACAACCTGAACGGTTGGGCGAAGAAAGAGAATCTGAAAAACTACGTTGTCTATGAAACGACGCGTAATGGTCAGCCGTGGTATGTCCTGGTTTCTGGCGTGTACGCTTCGAAAGAAGAGGCGAAAAAAGCGGTATCTACATTGCCAGCAGATGTCCAGGCCAAAAACCCGTGGGCGAAACCGCTGCGTCAGGTACAGGCCGATCTGAAGTAA", + "dna_sequence_length": 1287, + "functions": [ + "cell division protein that binds to the septal ring" + ], + "id": "CDS_3326", + "location": [ + [ + "NC_000913", + 3517306, + "-", + 1287 + ] + ], + "md5": "a8f406492b51dd02c1fb60718b786360", + "parent_gene": "", + "protein_md5": "b4e24f47ea8dd6b1589dddecec02e9b2", + "protein_translation": "MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011067" + ], + [ + "gene_synonym", + "ECK3376" + ], + [ + "gene_synonym", + "EcoGene:EG10074" + ], + [ + "gene_synonym", + "GI:16131267" + ], + [ + "gene_synonym", + "GeneID:947927" + ], + [ + "gene_synonym", + "JW3352" + ], + [ + "gene_synonym", + "NP_417848.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07639" + ], + [ + "gene_synonym", + "aroB" + ], + [ + "gene_synonym", + "b3389" + ] + ], + "dna_sequence": "ATGGAGAGGATTGTCGTTACTCTCGGGGAACGTAGTTACCCAATTACCATCGCATCTGGTTTGTTTAATGAACCAGCTTCATTCTTACCGCTGAAATCGGGCGAGCAGGTCATGTTGGTCACCAACGAAACCCTGGCTCCTCTGTATCTCGATAAGGTCCGCGGCGTACTTGAACAGGCGGGTGTTAACGTCGATAGCGTTATCCTCCCTGACGGCGAGCAGTATAAAAGCCTGGCTGTACTCGATACCGTCTTTACGGCGTTGTTACAAAAACCGCATGGTCGCGATACTACGCTGGTGGCGCTTGGCGGCGGCGTAGTGGGCGATCTGACCGGCTTCGCGGCGGCGAGTTATCAGCGCGGTGTCCGTTTCATTCAAGTCCCGACGACGTTACTGTCGCAGGTCGATTCCTCCGTTGGCGGCAAAACTGCGGTCAACCATCCCCTCGGTAAAAACATGATTGGCGCGTTCTACCAACCTGCTTCAGTGGTGGTGGATCTCGACTGTCTGAAAACGCTTCCCCCGCGTGAGTTAGCGTCGGGGCTGGCAGAAGTCATCAAATACGGCATTATTCTTGACGGTGCGTTTTTTAACTGGCTGGAAGAGAATCTGGATGCGTTGTTGCGTCTGGACGGTCCGGCAATGGCGTACTGTATTCGCCGTTGTTGTGAACTGAAGGCAGAAGTTGTCGCCGCCGACGAGCGCGAAACCGGGTTACGTGCTTTACTGAATCTGGGACACACCTTTGGTCATGCCATTGAAGCTGAAATGGGGTATGGCAATTGGTTACATGGTGAAGCGGTCGCTGCGGGTATGGTGATGGCGGCGCGGACGTCGGAACGTCTCGGGCAGTTTAGTTCTGCCGAAACGCAGCGTATTATAACCCTGCTCAAGCGGGCTGGGTTACCGGTCAATGGGCCGCGCGAAATGTCCGCGCAGGCGTATTTACCGCATATGCTGCGTGACAAGAAAGTCCTTGCGGGAGAGATGCGCTTAATTCTTCCGTTGGCAATTGGTAAGAGTGAAGTTCGCAGCGGCGTTTCGCACGAGCTTGTTCTTAACGCCATTGCCGATTGTCAATCAGCGTAA", + "dna_sequence_length": 1089, + "functions": [ + "3-dehydroquinate synthase" + ], + "id": "CDS_3327", + "location": [ + [ + "NC_000913", + 3518486, + "-", + 1089 + ] + ], + "md5": "493560571773d2cc25c1e7a94bc72e67", + "parent_gene": "", + "protein_md5": "ef90ba8d7bb1086d2c406e3764fb4b2d", + "protein_translation": "MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLILPLAIGKSEVRSGVSHELVLNAIADCQSA", + "protein_translation_length": 362, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011069" + ], + [ + "gene_synonym", + "ECK3377" + ], + [ + "gene_synonym", + "EcoGene:EG10081" + ], + [ + "gene_synonym", + "GI:90111581" + ], + [ + "gene_synonym", + "GeneID:2847759" + ], + [ + "gene_synonym", + "JW5947" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6D7" + ], + [ + "gene_synonym", + "YP_026215.2" + ], + [ + "gene_synonym", + "aroK" + ], + [ + "gene_synonym", + "b3390" + ] + ], + "dna_sequence": "ATGGCAGAGAAACGCAATATCTTTCTGGTTGGGCCTATGGGTGCCGGAAAAAGCACTATTGGGCGCCAGTTAGCTCAACAACTCAATATGGAATTTTACGATTCCGATCAAGAGATTGAGAAACGAACCGGAGCTGATGTGGGCTGGGTTTTCGATTTAGAAGGCGAAGAAGGCTTCCGCGATCGCGAAGAAAAGGTCATCAATGAGTTGACCGAGAAACAGGGTATTGTGCTGGCTACTGGCGGCGGCTCTGTGAAATCCCGTGAAACGCGTAACCGTCTTTCCGCTCGTGGCGTTGTCGTTTATCTTGAAACGACCATCGAAAAGCAACTTGCACGCACGCAGCGTGATAAAAAACGCCCGTTGCTGCACGTTGAAACACCGCCGCGTGAAGTTCTGGAAGCGTTGGCCAATGAACGCAATCCGCTGTATGAAGAGATTGCCGACGTGACCATTCGTACTGATGATCAAAGCGCTAAAGTGGTTGCAAACCAGATTATTCACATGCTGGAAAGCAACTAA", + "dna_sequence_length": 522, + "functions": [ + "shikimate kinase I" + ], + "id": "CDS_3328", + "location": [ + [ + "NC_000913", + 3519064, + "-", + 522 + ] + ], + "md5": "2f02e69c196caeac668f77a56135ac5e", + "parent_gene": "", + "protein_md5": "dee49c32c984d17a3904a2dc6dbfef34", + "protein_translation": "MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011071" + ], + [ + "gene_synonym", + "ECK3378" + ], + [ + "gene_synonym", + "EcoGene:EG12113" + ], + [ + "gene_synonym", + "GI:16131268" + ], + [ + "gene_synonym", + "GeneID:947901" + ], + [ + "gene_synonym", + "JW3354" + ], + [ + "gene_synonym", + "NP_417850.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P34749" + ], + [ + "gene_synonym", + "b3391" + ], + [ + "gene_synonym", + "hofQ" + ], + [ + "gene_synonym", + "hopQ" + ] + ], + "dna_sequence": "ATGAAGCAATGGATAGCCGCACTACTGTTGATGCTGATACCCGGCGTACAGGCGGCAAAGCCGCAAAAAGTGACGCTGATGGTGGATGACGTTCCGGTAGCTCAGGTGTTGCAGGCGCTGGCTGAACAGGAGAAGTTGAACCTGGTCGTGTCGCCAGACGTCAGCGGTACGGTGTCGTTACATCTAACAGATGTTCCCTGGAAGCAGGCACTACAAACTGTAGTGAAAAGCGCCGGACTGATAACGCGGCAGGAAGGCAACATTCTCTCAGTGCATTCCATTGCCTGGCAGAATAACAATATCGCCCGCCAGGAGGCGGAGCAGGCGCGGGCGCAGGCAAATCTGCCGCTGGAAAATCGCAGTATAACCCTGCAATACGCCGACGCGGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTATGACCGTCGATAAACGCACCAATCGCCTTTTGCTACGAGATAACAAAACGGCGTTAAGCGCGCTTGAACAGTGGGTAGCGCAAATGGATCTGCCGGTCGGGCAGGTTGAGCTGTCGGCGCATATTGTCACCATTAATGAAAAAAGTTTGCGTGAGTTAGGCGTGAAATGGACGCTGGCCGATGCGCAACACGCTGGTGGCGTTGGGCAAGTCACCACGCTTGGTAGCGACCTCTCCGTAGCGACGGCGACAACGCATGTCGGTTTTAACATTGGGCGCATCAACGGACGCTTGCTGGATCTTGAGCTTTCCGCGCTCGAACAAAAACAGCAGCTGGATATTATCGCCAGTCCGCGTCTGCTGGCCTCACATCTTCAGCCTGCCAGCATTAAACAGGGGAGCGAAATTCCATATCAGGTTTCCAGCGGGGAAAGTGGCGCGACGTCGGTGGAATTTAAAGAGGCCGTCCTGGGGATGGAGGTCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCGGGGCAGGTGCTACAGCAGGCCGATGGCGAAGTGCTGGCGATTGATAAGCAGGAGATCGAAACGCAGGTCGAGGTCAAAAGCGGAGAAACGTTGGCGCTGGGCGGCATTTTTACCCGTAAAAATAAATCGGGTCAGGATAGCGTACCGTTGCTTGGCGACATTCCCTGGTTCGGGCAATTATTTCGTCATGACGGAAAAGAAGATGAACGACGCGAGTTAGTGGTGTTTATCACGCCACGACTGGTTTCCAGTGAGTAA", + "dna_sequence_length": 1239, + "functions": [ + "DNA catabolic putative fimbrial transporter" + ], + "id": "CDS_3329", + "location": [ + [ + "NC_000913", + 3520703, + "-", + 1239 + ] + ], + "md5": "e4332994f24ae736f7c67d14a47554f4", + "parent_gene": "", + "protein_md5": "017f000777a7dd995b34803290a407ec", + "protein_translation": "MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE", + "protein_translation_length": 412, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011073" + ], + [ + "gene_synonym", + "ECK3379" + ], + [ + "gene_synonym", + "EcoGene:EG12922" + ], + [ + "gene_synonym", + "GI:90111582" + ], + [ + "gene_synonym", + "GeneID:947900" + ], + [ + "gene_synonym", + "JW5694" + ], + [ + "gene_synonym", + "NP_417851.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45750" + ], + [ + "gene_synonym", + "b3392" + ], + [ + "gene_synonym", + "hofP" + ], + [ + "gene_synonym", + "yrfA" + ] + ], + "dna_sequence": "ATGAGGGTTAAACGCTGGTTGTTGGCAGGTATTGCATTGTGCCTTTTAACCGGTATGCGTGACCCTTTTAAACCGCCGGAAGATCTATGCCGGATTAGCGAACTTAGCCAGTGGCGCTATCAGGGGATGGTAGGGCGAGGCGAGCGCATCATCGGTGTAATAAAAGACGGGCAAAAGAAATGGCGACGGGTGCAGCAAAACGATGTGCTGGAAAACGGCTGGACAATTTTACAGCTGACGCCAGACGTACTAACGCTGGGTACCGGGACAAACTGCGAACCGCCACAATGGTTGTGGCAACGGCAAGGAGATACAAATGAAGCAATGGATAGCCGCACTACTGTTGATGCTGATACCCGGCGTACAGGCGGCAAAGCCGCAAAAAGTGACGCTGATGGTGGATGA", + "dna_sequence_length": 405, + "functions": [ + "DNA catabolic protein" + ], + "id": "CDS_3330", + "location": [ + [ + "NC_000913", + 3521019, + "-", + 405 + ] + ], + "md5": "4b8044aba2c0d96277861463d74d506c", + "parent_gene": "", + "protein_md5": "86f73b1fba638fb86a227b2c13d9130b", + "protein_translation": "MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTRRTGGKAAKSDADGG", + "protein_translation_length": 134, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011075" + ], + [ + "gene_synonym", + "ECK3380" + ], + [ + "gene_synonym", + "EcoGene:EG12923" + ], + [ + "gene_synonym", + "GI:16131270" + ], + [ + "gene_synonym", + "GeneID:947899" + ], + [ + "gene_synonym", + "JW3356" + ], + [ + "gene_synonym", + "NP_417852.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45751" + ], + [ + "gene_synonym", + "b3393" + ], + [ + "gene_synonym", + "hofO" + ], + [ + "gene_synonym", + "yrfB" + ] + ], + "dna_sequence": "ATGAACATGTTCTTTGACTGGTGGTTCGCCACATCACCCCGCCTCCGCCAGCTTTGCTGGGCATTCTGGTTGCTGATGTTAGTTACGCTCATTTTTCTGTCATCGACACACCATGAAGAGCGCGACGCATTAATTCGACTACGGGCAAGTCATCACCAGCAGTGGGCCGCACTGTATCGCCTGGTAGACACCGCTCCCTTCAGCGAGGAAAAAACGCTGCCCTTTTCGCCACTGGATTTTCAGTTATCCGGCGCGCAACTGGTTTCCTGGCATCCATCCGCGCAGGGAGGCGAGTTGGCGTTGAAAACGCTGTGGGAAGCAGTGCCGTCGGCATTTACACGGCTGGCAGAGCGCAACGTCAGCGTGAGCCGTTTTTCGTTAAGCGTGGAAGGTGATGATCTTTTGTTCACGCTACAACTGGAGACGCCGCATGAGGGTTAA", + "dna_sequence_length": 441, + "functions": [ + "DNA catabolic protein" + ], + "id": "CDS_3331", + "location": [ + [ + "NC_000913", + 3521449, + "-", + 441 + ] + ], + "md5": "c9c27e412c09b4176ce13b5acf2d976b", + "parent_gene": "", + "protein_md5": "e96dd3d4a0a611128fc1f6167f9b8534", + "protein_translation": "MNMFFDWWFATSPRLRQLCWAFWLLMLVTLIFLSSTHHEERDALIRLRASHHQQWAALYRLVDTAPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011077" + ], + [ + "gene_synonym", + "ECK3381" + ], + [ + "gene_synonym", + "EcoGene:EG12924" + ], + [ + "gene_synonym", + "GI:16131271" + ], + [ + "gene_synonym", + "GeneID:947898" + ], + [ + "gene_synonym", + "JW3357" + ], + [ + "gene_synonym", + "NP_417853.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64634" + ], + [ + "gene_synonym", + "b3394" + ], + [ + "gene_synonym", + "hofN" + ], + [ + "gene_synonym", + "yrfC" + ] + ], + "dna_sequence": "ATGAACCCGCCAATTAATTTTTTGCCCTGGCGACAGCAACGCCGGACCGCTTTTCTGCGTTTCTGGTTGCTGATGTTCGTTGCGCCTCTGCTGCTGGCCGTCGGGATAACGCTAATACTGCGTCTGACAGGCAGCGCCGAAGCGCGCATAGACGCAGTTTTGCTTCAGGCGGAACAACAACTCGCCCGCAGCTTACAGATAACGAAGCCACGTTTGCTGGAGCAACAGCAGTTACGCGAACAGCGTTCGCAACGGCAGCGCCAGCGACAATTTACCCGCGACTGGCAATCTGCGCTGGAAGCACTGGCGGCGCTTTTACCCGAGCACGCCTGGCTGACAACGATAAGCTGGCAGCAGGGAACGCTGGAGATCAAGGGGCTGACAACAAGCATTACCGCGTTAAACGCACTAGAAACGTCACTCCGCCAGGATGCATCTTTTCATCTCAATCAGCGGGGAGCCACGCAGCAGGATGCGCAGGGACGCTGGCAATTTGAGTATCAGTTAACAAGGAAGGTTAGCGATGAACATGTTCTTTGA", + "dna_sequence_length": 540, + "functions": [ + "DNA catabolic putative fimbrial assembly protein" + ], + "id": "CDS_3332", + "location": [ + [ + "NC_000913", + 3521972, + "-", + 540 + ] + ], + "md5": "789467581f6a47f540d4d1fbf159fd2a", + "parent_gene": "", + "protein_md5": "15cdced7c289825b0288cd8854133daf", + "protein_translation": "MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTGSAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011079" + ], + [ + "gene_synonym", + "ECK3382" + ], + [ + "gene_synonym", + "EcoGene:EG12925" + ], + [ + "gene_synonym", + "GI:90111583" + ], + [ + "gene_synonym", + "GeneID:947908" + ], + [ + "gene_synonym", + "JW5693" + ], + [ + "gene_synonym", + "NP_417854.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45753" + ], + [ + "gene_synonym", + "b3395" + ], + [ + "gene_synonym", + "hofM" + ], + [ + "gene_synonym", + "yrfD" + ] + ], + "dna_sequence": "ATGGCATTTAAGATCTGGCAAATTGGTTTGCATTTACAACAGCAAGAAGCGGTAGCGGTTGCGATCGTGCGGGGCGCAAAAGAATGCTTTTTGCAACGCTGGTGGCGGTTGCCGCTGGAGAACGACATTATCAAAGATGGGCGGATTGTTGATGCGCAGCAGCTGGCTAAAACGTTGTTACCGTGGAGTCGCGAACTGCCGCAGCGTCATCACATTATGTTGGCGTTTCCCGCCAGTCGCACATTACAGCGGTCATTTCCGCGCCCGTCGATGTCCCTTGGTGAGCGGGAGCAAACGGCCTGGCTGTCAGGGACGATGGCCCGCGAGCTGGATATGGATCCGGACTCCCTGCGCTTCGATTACAGCGAAGACTCACTCAGTCCCGCCTATAACGTGACTGCCGCGCAAAGCAAAGAGCTGGCAACGCTGCTTACTCTGGCAGAAAGGTTGCGTGTTCATGTGAGCGCGATCACCCCGGATGCCAGTGCATTACAGCGATTCCTGCCTTTTTTACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGCGACGCGCTATAGCTGGGGGCGCAAACTGGCGGTGGGGATGACTAGCGCGAAGGAGCTGGCGGCAGCGTTATCCGTTGATCCCGAAAGCGTCGCGATATGTGGCGAAGGCGGATTTGATCCCTGGGAGGCCGTTTCTGTTCGTCAGCCGCCGCTACCGCCGCCAGGTGGAGACTTTGCCATCGCGCTGGGGCTGGCGCTTGGGAAGGCGTACTGA", + "dna_sequence_length": 780, + "functions": [ + "DNA catabolic putative pilus assembly protein" + ], + "id": "CDS_3333", + "location": [ + [ + "NC_000913", + 3522751, + "-", + 780 + ] + ], + "md5": "9ae456c9e036ae1a2ceea2dcafefe2d8", + "parent_gene": "", + "protein_md5": "97f5eef863ffe960d3e1542d8ec96b7f", + "protein_translation": "MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011082" + ], + [ + "gene_synonym", + "ECK3383" + ], + [ + "gene_synonym", + "EcoGene:EG10748" + ], + [ + "gene_synonym", + "GI:162135911" + ], + [ + "gene_synonym", + "GeneID:947907" + ], + [ + "gene_synonym", + "JW3359" + ], + [ + "gene_synonym", + "NP_417855.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02918" + ], + [ + "gene_synonym", + "b3396" + ], + [ + "gene_synonym", + "mrcA" + ], + [ + "gene_synonym", + "ponA" + ] + ], + "dna_sequence": "GTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCTGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGATTGCTCAATACGGTGAGAAACGTCGTATTCCGGTTACGTTGGATCAAATCCCACCGGAGATGGTGAAAGCCTTTATCGCGACAGAAGACAGCCGCTTCTACGAGCATCACGGCGTTGACCCGGTGGGGATCTTCCGTGCAGCAAGCGTGGCGCTGTTCTCCGGTCACGCGTCACAAGGGGCAAGTACCATTACCCAGCAGCTGGCGAGAAACTTCTTCCTCAGTCCAGAACGCACGCTGATGCGTAAGATTAAGGAAGTCTTCCTCGCGATTCGCATTGAACAGCTGCTGACGAAAGACGAGATCCTCGAGCTTTATCTGAACAAGATTTACCTTGGTTACCGCGCCTATGGTGTCGGTGCTGCGGCACAAGTCTATTTCGGAAAAACGGTCGACCAACTGACGCTGAACGAAATGGCGGTGATAGCCGGGCTGCCGAAAGCGCCTTCCACCTTCAACCCGCTCTACTCGATGGATCGTGCCGTCGCGCGGCGTAACGTCGTGCTGTCGCGGATGCTGGATGAAGGGTATATCACCCAACAACAGTTCGATCAGACACGCACTGAGGCGATTAACGCTAACTATCACGCGCCGGAGATTGCTTTCTCTGCGCCGTACCTGAGCGAAATGGTGCGCCAGGAGATGTATAACCGTTATGGCGAAAGTGCCTATGAAGACGGTTATCGCATTTACACCACCATCACCCGCAAAGTGCAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGCAAGTTTAACCGCGCCACCCAGGCACTGCGTCAGGTGGGTTCCAACATCAAACCGTTCCTCTACACCGCGGCGATGGATAAAGGTCTGACGCTGGCAAGTATGTTGAACGATGTGCCAATTTCTCGCTGGGATGCAAGTGCCGGTTCTGACTGGCAGCCGAAGAACTCACCACCGCAGTATGCTGGTCCAATTCGCTTACGTCAGGGGCTGGGTCAGTCGAAAAACGTGGTGATGGTACGCGCAATGCGGGCGATGGGCGTCGACTACGCTGCAGAATATCTGCAACGCTTCGGCTTCCCGGCACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGAATGCGATATTCCGGTGATTTACGGTGATACGCAGAAATCGAACGTGCTGGAAAATAACGATGTTGAAGATGTCGCTATCTCCCGCGAGCAGCAGAATGTTTCTGTACCAATGCCGCAGCTGGAGCAGGCAAATCAGGCGTTAGTGGCGAAGACTGGCGCGCAGGAGTACGCACCGCACGTCATCAACACTCCGCTGGCATTCCTGATTAAGAGTGCTTTGAACACCAATATCTTTGGTGAGCCAGGCTGGCAGGGTACTGGCTGGCGTGCAGGTCGTGATTTGCAGCGTCGCGATATCGGCGGGAAAACCGGGACCACTAACAGTTCGAAAGATGCGTGGTTCTCGGGTTACGGTCCGGGCGTTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACCGGGTATTGTGACGGTGAATATCGATCGCAGCACCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGA", + "dna_sequence_length": 2553, + "functions": [ + "penicillin-binding protein 1a, murein transglycosylase and transpeptidase" + ], + "id": "CDS_3334", + "location": [ + [ + "NC_000913", + 3522871, + "+", + 2553 + ] + ], + "md5": "1dd5b1c34f40d59faf3d9e26c1717edb", + "parent_gene": "", + "protein_md5": "c192d328f22f9a1df0f1b929534e2cd4", + "protein_translation": "MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDASAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF", + "protein_translation_length": 850, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011086" + ], + [ + "gene_synonym", + "ECK3384" + ], + [ + "gene_synonym", + "EcoGene:EG12926" + ], + [ + "gene_synonym", + "GI:16131274" + ], + [ + "gene_synonym", + "GeneID:947906" + ], + [ + "gene_synonym", + "JW3360" + ], + [ + "gene_synonym", + "NP_417856.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45799" + ], + [ + "gene_synonym", + "b3397" + ], + [ + "gene_synonym", + "nudE" + ], + [ + "gene_synonym", + "yrfE" + ] + ], + "dna_sequence": "ATGAGCAAATCATTACAAAAACCCACCATTCTGAATGTTGAAACTGTAGCCCGTTCCCGACTGTTTACCGTCGAGAGCGTGGATCTGGAGTTCAGCAATGGCGTGCGGCGTGTTTATGAACGAATGCGTCCAACCAACCGGGAAGCAGTGATGATTGTGCCGATTGTGGACGATCACCTGATCCTGATCCGCGAATACGCAGTGGGAACTGAATCCTACGAATTAGGTTTTTCGAAAGGATTAATTGATCCGGGTGAAAGCGTCTACGAAGCCGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTGAAGAAGCTCAGCATGGCACCGTCTTACTTTTCCAGCAAAATGAATATCGTGGTAGCGCAAGATCTCTACCCGGAATCACTGGAAGGCGATGAGCCAGAGCCGCTACCACAGGTGCGCTGGCCGCTGGCGCATATGATGGATTTGCTGGAAGACCCTGACTTCAATGAAGCGCGCAATGTCAGTGCGCTGTTCCTCGTGCGCGAATGGTTGAAAGGGCAGGGGCGAGTGTAA", + "dna_sequence_length": 561, + "functions": [ + "adenosine nucleotide hydrolase", + "Ap3A/Ap2A/ADP-ribose/NADH hydrolase" + ], + "id": "CDS_3335", + "location": [ + [ + "NC_000913", + 3526149, + "-", + 561 + ] + ], + "md5": "6e7910aac7c79d97f1f117ae5b1b5bb7", + "parent_gene": "", + "protein_md5": "f7085bdf5fd53b4058ad6dee28a70a29", + "protein_translation": "MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSALFLVREWLKGQGRV", + "protein_translation_length": 186, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011090" + ], + [ + "gene_synonym", + "ECK3385" + ], + [ + "gene_synonym", + "EcoGene:EG12927" + ], + [ + "gene_synonym", + "GI:16131275" + ], + [ + "gene_synonym", + "GeneID:947905" + ], + [ + "gene_synonym", + "JW3361" + ], + [ + "gene_synonym", + "NP_417857.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45800" + ], + [ + "gene_synonym", + "b3398" + ], + [ + "gene_synonym", + "igaA" + ], + [ + "gene_synonym", + "mucM" + ], + [ + "gene_synonym", + "umoB" + ], + [ + "gene_synonym", + "yrfF" + ] + ], + "dna_sequence": "ATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAACGCGTAAACTCACACCTGAAGAACGTAGCGCCGTTGAAAATTATCTTGAGAGCCTGACGCAGGTATTACAGGTGCCTGGCCCAACGGGAGCCAGCGCGGCACCGATCTCTCTGGCGCTGAATGCCGAAAGCAACAACGTCATGATGCTGACACACGCTATCACGCGTTACGGCATCTCTACCGACGATCCGAATAAATGGCGTTACTACCTCGATTCGGTAGAAGTCCACCTGCCCCCTTTCTGGGAACAGTACATCAACGATGAGAATACCGTTGAACTGATTCATACCGATTCGCTGCCGCTGGTTATTTCACTCAACGGTCATACGCTGCAGGAGTACATGCAGGAAACTCGCAGCTATGCCTTGCAACCTGTTCCGTCAACGCAGGCGTCGATTCGCGGGGAAGAGAGTGAGCAAATCGAGCTACTCAATATTCGCAAAGAAACGCATGAAGAATATGCGCTGAGTCGTCCGCGCGGGCTGCGTGAAGCGTTGCTGATCGTCGCCTCCTTCCTGATGTTCTTTTTCTGCCTGATTACCCCGGATGTATTTGTTCCGTGGCTGGCAGGCGGCGCGTTACTGCTGCTGGGCGCAGGTCTGTGGGGGCTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCAGAATCTGAACTGGTCAACAAAGCGACGGCATTGACTGAAGCAGTTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGGATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCATATTGGCCTTCATCCGATCCCGGATCGTTCCGGCCTGTGGCGCTATCTCAGCACCACATTGCTGCTACTGACGATGCTGGGTAGCGCCATTTACAATGGCGTACAGGCCTGGCGTCGTTACCAGCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAA", + "dna_sequence_length": 2136, + "functions": [ + "putative RcsCDB-response attenuator, inner membrane protein" + ], + "id": "CDS_3336", + "location": [ + [ + "NC_000913", + 3526469, + "+", + 2136 + ] + ], + "md5": "9cd1731256e8ad3da1ca0aab36ac9228", + "parent_gene": "", + "protein_md5": "142cced7a3ce81f0daee60d91f4ebcfc", + "protein_translation": "MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE", + "protein_translation_length": 711, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011092" + ], + [ + "gene_synonym", + "ECK3386" + ], + [ + "gene_synonym", + "EcoGene:EG12928" + ], + [ + "gene_synonym", + "GI:90111585" + ], + [ + "gene_synonym", + "GeneID:947904" + ], + [ + "gene_synonym", + "JW5865" + ], + [ + "gene_synonym", + "NP_417858.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64636" + ], + [ + "gene_synonym", + "b3399" + ], + [ + "gene_synonym", + "yrfG" + ] + ], + "dna_sequence": "ATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGCCACAGGAAGCGATGGAATATATGCGCCAGCAATATCACGACGTACAGCATACGCTAAACTGGTACTGTCTTGATTACTGGAGTGAGCAACTGGGTCTGGATATCTGTGCGATGACCACCGAGATGGGACCGCGTGCCGTACTGCGTGAAGATACCATTCCGTTTCTTGAGGCACTGAAAGCCAGCGGTAAGCAGCGAATTTTGCTCACCAATGCGCATCCGCACAACCTGGCGGTAAAACTTGAGCATACCGGTCTGGACGCACACCTTGATTTATTACTTTCCACCCACACATTTGGTTATCCGAAAGAGGATCAGCGGTTATGGCATGCGGTGGCCGAAGCTACGGGTCTGAAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGA", + "dna_sequence_length": 669, + "functions": [ + "GMP/IMP nucleotidase" + ], + "id": "CDS_3337", + "location": [ + [ + "NC_000913", + 3528669, + "+", + 669 + ] + ], + "md5": "eccf7d742af96426acd0b467e1abc711", + "parent_gene": "", + "protein_md5": "50de4a9acc2a2c50cf28b01e4ddd6a12", + "protein_translation": "MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011094" + ], + [ + "gene_synonym", + "ECK3387" + ], + [ + "gene_synonym", + "EcoGene:EG12929" + ], + [ + "gene_synonym", + "GI:16131277" + ], + [ + "gene_synonym", + "GeneID:947912" + ], + [ + "gene_synonym", + "JW3363" + ], + [ + "gene_synonym", + "NP_417859.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACG8" + ], + [ + "gene_synonym", + "b3400" + ], + [ + "gene_synonym", + "hslR" + ], + [ + "gene_synonym", + "yrfH" + ] + ], + "dna_sequence": "ATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACTTAATGCCTTAACCATGCCGCACCCGGACCGACGCCCGGACAAAAAAGAGCGCCGCGACCTGTTACGATTTAAACACGGCGACAGTGAATAA", + "dna_sequence_length": 402, + "functions": [ + "ribosome-associated heat shock protein Hsp15" + ], + "id": "CDS_3338", + "location": [ + [ + "NC_000913", + 3529348, + "+", + 402 + ] + ], + "md5": "0f8cc28ed1d04fbbe2675ae3a5129820", + "parent_gene": "", + "protein_md5": "ffd3ae488feb0a7b0ad90f4f5fa81c8d", + "protein_translation": "MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011096" + ], + [ + "gene_synonym", + "ECK3388" + ], + [ + "gene_synonym", + "EcoGene:EG12930" + ], + [ + "gene_synonym", + "GI:90111586" + ], + [ + "gene_synonym", + "GeneID:947178" + ], + [ + "gene_synonym", + "JW5692" + ], + [ + "gene_synonym", + "NP_417860.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Y5" + ], + [ + "gene_synonym", + "b3401" + ], + [ + "gene_synonym", + "hslO" + ], + [ + "gene_synonym", + "yrfI" + ] + ], + "dna_sequence": "ATGCCGCAACATGACCAATTACATCGCTATCTGTTTGAAAACTTTGCCGTGCGCGGCGAACTGGTAACCGTTTCGGAAACCCTGCAACAGATCCTTGAGAACCACGATTATCCGCAGCCCGTTAAAAACGTGCTGGCAGAACTGCTGGTTGCGACCAGCCTGTTAACCGCTACGCTGAAGTTTGATGGTGATATCACCGTACAGCTGCAGGGCGACGGTCCGATGAATCTGGCGGTTATTAACGGTAACAATAACCAGCAGATGCGCGGTGTGGCGCGCGTGCAGGGCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGGACGACTTTGACCACCTGGCGACGCTAACCGAAACCATCAAAACCGAAGAACTGCTGACCTTACCGGCAAACGAAGTGTTGTGGCGTTTGTATCACGAAGAAGAGGTGACGGTTTACGATCCGCAGGATGTGGAGTTCAAATGCACCTGCTCGCGTGAACGTTGCGCCGATGCGCTGAAAACGCTGCCTGATGAAGAAGTTGATAGCATCCTGGCGGAAGATGGCGAAATTGACATGCATTGTGATTACTGCGGTAACCACTATCTGTTCAATGCGATGGATATTGCTGAAATCCGCAACAACGCGTCTCCGGCAGATCCGCAAGTTCATTAA", + "dna_sequence_length": 879, + "functions": [ + "heat shock protein Hsp33" + ], + "id": "CDS_3339", + "location": [ + [ + "NC_000913", + 3529774, + "+", + 879 + ] + ], + "md5": "cd79d387189aaf86c483f2717bfaa923", + "parent_gene": "", + "protein_md5": "318d18d3118b6b44e1aed873603a898a", + "protein_translation": "MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011098" + ], + [ + "gene_synonym", + "ECK3389" + ], + [ + "gene_synonym", + "EcoGene:EG12931" + ], + [ + "gene_synonym", + "GI:16131279" + ], + [ + "gene_synonym", + "GeneID:947651" + ], + [ + "gene_synonym", + "JW3365" + ], + [ + "gene_synonym", + "NP_417861.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45804" + ], + [ + "gene_synonym", + "b3402" + ], + [ + "gene_synonym", + "yhgE" + ] + ], + "dna_sequence": "ATGGATAACGTTGAACTTTCACCCGCAACACGCTGGGGGATGATTGCTACCGGATTACTTCAGGGTCTGGTTTGCTACCTGCTGATCGCCTGGCTTTCCGGAAAAAATCACAGTTGGATTGTTTATGGCGTGCCTGCGACCGTCGCGTTTTCATCCGTTTTACTCTTCTCCGTGATCTCTTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTAGTGTTTATTGCCACGCTGGGGATGAGCGGCTGGCTGAAGTGGCAAACTGATGGCATGAACCCCTGGAGAGCTGAAAAGGCGCTTTGGGATTTTGGTTGCTATCTGCTGTTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGCATCCGCAATGACAGTAGCCGCTATCGCTATTTTTACCAGTCAGTATGGCATAACGTACTTATATTACTGGTGATTTTTCTCGCCAATGGCTTGACGTGGCTGGTGCTTTTACTGTGGAGTGAGTTGTTTAAACTTGTTGGCATCACGTTTTTCAATACGCTCTTTTTTGCAACCGACTGGTTTATTTATCTCACGTTAGGTCTGGTTACCGCGCTGGCGGTGATCCTCGCGCGAACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGTTCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATCATCACCCTGCCGTTTACGGGCCTGAGCGCGATTTCTCGCCACATCTCCGCCGCCGGGTTGCTGTTGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGGTGCTGGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTCAGCATCGTCTGGCGTAAAGGGCAAAATCCCGTTGTTCTTCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATGGACGTGCTGCGCTTGAGTCGCTGAAAAGCGATGCCGGGTTTATGAAAGACCCGAAACGCGCGCGGGATCTGCTGATGGCGTTAGATGGAGAGCAACATCTTCAGCAACAGGTATCGGAAAAAGTATTAGCCGATAATGTGTTAATTGCCCCTGGTTCTGTTAAACCTGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTATAACGTGATGACCTGTATTGAAAAAGACGCCTGCGTCCTGGTCGAGCAAGATCTGAATAGTGATGGTCAGGCGGAGCGGATCCTGTTTGCTTTTAATGATGACAGAGTCATTGTCTATGGCTTTGACTCAGACAGAAAAGAATGGGACGCGCTTGATATGAGTTTACTTCCGAACGAAATAACGAAAGAAAAATTACTCACAGCTGCGAAGGATGGAAAACTGGGGACGAAGCCTAAAGCGTGGCGCGATCTTGTAGTGGATGGTGAAAGGCTGAATGTGAATCTGAATGAGTGA", + "dna_sequence_length": 1725, + "functions": [ + "DUF4153 family putative inner membrane protein" + ], + "id": "CDS_3340", + "location": [ + [ + "NC_000913", + 3532439, + "-", + 1725 + ] + ], + "md5": "d18045dd0d374d28aa610533fffe4956", + "parent_gene": "", + "protein_md5": "beb23963219af59bac4b87ad9427731d", + "protein_translation": "MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE", + "protein_translation_length": 574, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011106" + ], + [ + "gene_synonym", + "ECK3390" + ], + [ + "gene_synonym", + "EcoGene:EG10688" + ], + [ + "gene_synonym", + "GI:16131280" + ], + [ + "gene_synonym", + "GeneID:945667" + ], + [ + "gene_synonym", + "JW3366" + ], + [ + "gene_synonym", + "NP_417862.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22259" + ], + [ + "gene_synonym", + "b3403" + ], + [ + "gene_synonym", + "pck" + ], + [ + "gene_synonym", + "pckA" + ] + ], + "dna_sequence": "ATGCGCGTTAACAATGGTTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCCGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGAAACCTGGCAGCATCTGAAAGGCCTGGTGACCAGGCAGCTTTCCGGCAAACGTCTGTTCGTTGTCGACGCTTTCTGTGGTGCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCTGAAAGGTATCGCTTCTATGCACTGCTCCGCCAACGTTGGTGAGAAAGGCGATGTTGCGGTGTTCTTCGGCCTTTCCGGCACCGGTAAAACCACCCTTTCCACCGACCCGAAACGTCGCCTGATTGGCGATGACGAACACGGCTGGGACGATGACGGCGTGTTTAACTTCGAAGGCGGCTGCTACGCAAAAACTATCAAGCTGTCGAAAGAAGCGGAACCTGAAATCTACAACGCTATCCGTCGTGATGCGTTGCTGGAAAACGTCACCGTGCGTGAAGATGGCACTATCGACTTTGATGATGGTTCAAAAACCGAGAACACCCGCGTTTCTTATCCGATCTATCACATCGATAACATTGTTAAGCCGGTTTCCAAAGCGGGCCACGCGACTAAGGTTATCTTCCTGACTGCTGATGCTTTCGGCGTGTTGCCGCCGGTTTCTCGCCTGACTGCCGATCAAACCCAGTATCACTTCCTCTCTGGCTTCACCGCCAAACTGGCCGGTACTGAGCGTGGCATCACCGAACCGACGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAA", + "dna_sequence_length": 1623, + "functions": [ + "phosphoenolpyruvate carboxykinase [ATP]" + ], + "id": "CDS_3341", + "location": [ + [ + "NC_000913", + 3532818, + "+", + 1623 + ] + ], + "md5": "18ac2d96b4a75c3457fbbe6303f427fa", + "parent_gene": "", + "protein_md5": "67322d9efd747328ae1f0f9c34caf12f", + "protein_translation": "MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETWQHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTDTPAGAALVAAGPKL", + "protein_translation_length": 540, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011108" + ], + [ + "gene_synonym", + "ECK3391" + ], + [ + "gene_synonym", + "EcoGene:EG10269" + ], + [ + "gene_synonym", + "GI:16131281" + ], + [ + "gene_synonym", + "GeneID:947272" + ], + [ + "gene_synonym", + "JW3367" + ], + [ + "gene_synonym", + "NP_417863.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEJ4" + ], + [ + "gene_synonym", + "b3404" + ], + [ + "gene_synonym", + "cpr" + ], + [ + "gene_synonym", + "envZ" + ], + [ + "gene_synonym", + "ompB" + ], + [ + "gene_synonym", + "perA" + ], + [ + "gene_synonym", + "tpo" + ] + ], + "dna_sequence": "ATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTGCCCGTACGTTATTGCTCATCGTCACCTTGCTGTTCGCCAGCCTGGTGACGACTTATCTGGTGGTGCTGAACTTCGCGATTTTGCCGAGCCTCCAGCAGTTTAATAAAGTCCTCGCGTACGAAGTGCGTATGTTGATGACCGACAAACTGCAACTGGAGGACGGCACGCAGTTGGTTGTGCCTCCCGCTTTCCGTCGGGAGATCTACCGTGAGCTGGGGATCTCTCTCTACTCCAACGAGGCTGCCGAAGAGGCAGGTCTGCGTTGGGCGCAACACTATGAATTCTTAAGCCATCAGATGGCGCAGCAACTGGGCGGCCCGACGGAAGTGCGCGTTGAGGTCAACAAAAGTTCGCCTGTCGTCTGGCTGAAAACCTGGCTGTCGCCCAATATCTGGGTACGCGTGCCGCTGACCGAAATTCATCAGGGCGATTTCTCTCCGCTGTTCCGCTATACGCTGGCGATTATGCTATTGGCGATAGGCGGGGCGTGGCTGTTTATTCGTATCCAGAACCGACCGTTGGTCGATCTCGAACACGCAGCCTTGCAGGTTGGTAAAGGGATTATTCCGCCGCCGCTGCGTGAGTATGGCGCTTCGGAGGTGCGTTCCGTTACCCGTGCCTTTAACCATATGGCGGCTGGTGTTAAGCAACTGGCGGATGACCGCACGCTGCTGATGGCGGGGGTAAGTCACGACTTGCGCACGCCGCTGACGCGTATTCGCCTGGCGACTGAGATGATGAGCGAGCAGGATGGCTATCTGGCAGAATCGATCAATAAAGATATCGAAGAGTGCAACGCCATCATTGAGCAGTTTATCGACTACCTGCGCACCGGGCAGGAGATGCCGATGGAAATGGCGGATCTTAATGCAGTACTCGGTGAGGTGATTGCTGCCGAAAGTGGCTATGAGCGGGAAATTGAAACCGCGCTTTACCCCGGCAGCATTGAAGTGAAAATGCACCCGCTGTCGATCAAACGCGCGGTGGCGAATATGGTGGTCAACGCCGCCCGTTATGGCAATGGCTGGATCAAAGTCAGCAGCGGAACGGAGCCGAATCGCGCCTGGTTCCAGGTGGAAGATGACGGTCCGGGAATTGCGCCGGAACAACGTAAGCACCTGTTCCAGCCGTTTGTCCGCGGCGACAGTGCGCGCACCATTAGCGGCACGGGATTAGGGCTGGCAATTGTGCAGCGTATCGTGGATAACCATAACGGGATGCTGGAGCTTGGCACCAGCGAGCGGGGCGGGCTTTCCATTCGCGCCTGGCTGCCAGTGCCGGTAACGCGGGCGCAGGGCACGACAAAAGAAGGGTAA", + "dna_sequence_length": 1353, + "functions": [ + "sensory histidine kinase in two-component regulatory system with OmpR" + ], + "id": "CDS_3342", + "location": [ + [ + "NC_000913", + 3535868, + "-", + 1353 + ] + ], + "md5": "1d922e8c4c4c4b53de77be2967a39165", + "parent_gene": "", + "protein_md5": "c031d0acd4f2e15d990bf4ae754a41c9", + "protein_translation": "MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011110" + ], + [ + "gene_synonym", + "ECK3392" + ], + [ + "gene_synonym", + "EcoGene:EG10672" + ], + [ + "gene_synonym", + "GI:16131282" + ], + [ + "gene_synonym", + "GeneID:947913" + ], + [ + "gene_synonym", + "JW3368" + ], + [ + "gene_synonym", + "NP_417864.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA16" + ], + [ + "gene_synonym", + "b3405" + ], + [ + "gene_synonym", + "kmt" + ], + [ + "gene_synonym", + "ompB" + ], + [ + "gene_synonym", + "ompR" + ] + ], + "dna_sequence": "ATGCAAGAGAACTACAAGATTCTGGTGGTCGATGACGACATGCGCCTGCGTGCGCTGCTGGAACGTTATCTCACCGAACAAGGCTTCCAGGTTCGAAGCGTCGCTAATGCAGAACAGATGGATCGCCTGCTGACTCGTGAATCTTTCCATCTTATGGTACTGGATTTAATGTTACCTGGTGAAGATGGCTTGTCGATTTGCCGACGTCTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCCGCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACAGGAAGAGGCGGTAATTGCTTTCGGTAAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCGTCTGGGGTCTGGGCTACGTCTTTGTACCGGACGGCTCTAAAGCATGA", + "dna_sequence_length": 720, + "functions": [ + "response regulator in two-component regulatory system with EnvZ" + ], + "id": "CDS_3343", + "location": [ + [ + "NC_000913", + 3536584, + "-", + 720 + ] + ], + "md5": "d6750888682a41dfa4f1eba4bdc6a5ce", + "parent_gene": "", + "protein_md5": "d8521a76d5088ea0467c0daab9e28465", + "protein_translation": "MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011117" + ], + [ + "gene_synonym", + "ECK3393" + ], + [ + "gene_synonym", + "EcoGene:EG11578" + ], + [ + "gene_synonym", + "GI:90111587" + ], + [ + "gene_synonym", + "GeneID:2847706" + ], + [ + "gene_synonym", + "JW3369" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30128" + ], + [ + "gene_synonym", + "YP_026216.2" + ], + [ + "gene_synonym", + "b3406" + ], + [ + "gene_synonym", + "greB" + ] + ], + "dna_sequence": "ATGAAAACGCCCCTGGTTACCCGGGAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGCGTCTGCGTGAAATCGACCGTCGCGTGCGCTATCTCACTAAATGCCTGGAAAATCTCAAAATCGTCGATTACTCCCCTCAGCAGGAAGGCAAAGTCTTTTTTGGCGCGTGGGTGGAGATTGAAAACGACGATGGCGTGACTCACCGTTTCCGTATTGTCGGCTACGATGAAATTTTTGGCCGTAAAGATTACATCTCTATCGATTCCCCGATGGCCCGCGCATTGCTGAAAAAAGAAGTCGGCGATCTGGCGGTGGTGAATACCCCTGCCGGGGAAGCGAGCTGGTATGTTAATGCTATCGAGTACGTGAAACCGTAA", + "dna_sequence_length": 477, + "functions": [ + "transcript cleavage factor" + ], + "id": "CDS_3344", + "location": [ + [ + "NC_000913", + 3536812, + "+", + 477 + ] + ], + "md5": "0d011deb95ad7bc8c8c623d385f5d211", + "parent_gene": "", + "protein_md5": "cbd1e46fcee8c2b1fdf04f2ed9e3dcd9", + "protein_translation": "MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011120" + ], + [ + "gene_synonym", + "ECK3394" + ], + [ + "gene_synonym", + "EcoGene:EG12932" + ], + [ + "gene_synonym", + "GI:90111588" + ], + [ + "gene_synonym", + "GeneID:947911" + ], + [ + "gene_synonym", + "JW3370" + ], + [ + "gene_synonym", + "NP_417866.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46837" + ], + [ + "gene_synonym", + "b3407" + ], + [ + "gene_synonym", + "tex" + ], + [ + "gene_synonym", + "yhgF" + ] + ], + "dna_sequence": "ATGATGAATGATTCGTTCTGCCGCATTATTGCGGGTGAAATTCAGGCGCGCCCGGAACAGGTTGACGCTGCCGTTCGCCTGCTTGACGAAGGGAATACCGTGCCGTTTATCGCACGTTATCGTAAGGAAATCACCGGCGGTCTGGATGACACGCAGCTGCGTAATCTGGAAACGCGTCTGAGCTATCTGCGCGAGCTGGAAGAGAGACGTCAGGCGATCCTCAAGTCCATTTCCGAGCAAGGCAAACTCACCGATGATCTGGCGAAGGCCATCAACGCCACCCTAAGCAAAACCGAACTCGAAGACCTCTACCTGCCCTACAAACCTAAACGCCGCACCCGCGGGCAAATCGCCATTGAAGCAGGGCTTGAGCCGTTGGCTGACCTGCTGTGGAGCGATCCGTCACACACGCCAGAAGTCGCCGCTGCACAATATGTTTATGCCGATAAAGGCGTGGCAGATACCAAAGCCGCGCTGGATGGCGCGCGCTATATCCTGATGGAACGGTTTGCCGAAGATGCCGCGCTGCTGGCGAAAGTGCGTGATTATCTGTGGAAGAACGCGCATTTGGTTTCTACGGTGGTGAGCGGTAAAGAAGAGGAAGGGGCGAAATTCCGCGACTATTTCGATCATCACGAACCGTTGTCCACGGTGCCTTCTCACCGCGCGCTGGCGATGTTCCGTGGGCGTAACGAAGGCGTACTTCAGCTTTCGCTGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGTGGCGCATCAAGGTGCTGATGCATCTGGAAACCGAACTGATGGGCACCGTGCGCGAACGTGCGGAAGATGAAGCAATCAACGTCTTTGCCCGTAACCTGCACGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATCCGGGTCTGCGTACTGGGGTAAAAGTGGCGGTGGTCGATGCCACTGGCAAACTGGTGGCGACCGACACCATTTACCCGCACACCGGACAGGCCGCAAAAGCAGCGATGACCGTTGCTGCGCTGTGTGAAAAACATAACGTTGAACTGGTAGCGATCGGTAACGGTACAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGCAGTAGTAGAAGACTGCGTAAACGCCGTTGGCGTCGATCTCAACACTGCTTCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACTGCGTAACCTGAAAGCGTCTGACTTTACTGATGAGAAATTCGGTGTGCCGACGGTAACCGACATCATCAAAGAGCTGGAAAAACCGGGTCGCGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGCAGCCTGGCGAAACCAACGCTCGTCGCGGCGGCGGTAATGAACGCCCGCAAAACAACCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAA", + "dna_sequence_length": 2322, + "functions": [ + "putative transcriptional accessory protein" + ], + "id": "CDS_3345", + "location": [ + [ + "NC_000913", + 3537385, + "+", + 2322 + ] + ], + "md5": "8920659bb1c054f9a453cdc336a5d4e6", + "parent_gene": "", + "protein_md5": "e9187cf056d5ab1098f30dcbda30cccc", + "protein_translation": "MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR", + "protein_translation_length": 773, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011124" + ], + [ + "gene_synonym", + "ECK3395" + ], + [ + "gene_synonym", + "EcoGene:EG12101" + ], + [ + "gene_synonym", + "GI:16131284" + ], + [ + "gene_synonym", + "GeneID:947909" + ], + [ + "gene_synonym", + "JW3371" + ], + [ + "gene_synonym", + "NP_417867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEL3" + ], + [ + "gene_synonym", + "b3408" + ], + [ + "gene_synonym", + "feoA" + ] + ], + "dna_sequence": "ATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAA", + "dna_sequence_length": 228, + "functions": [ + "ferrous iron transporter, protein A" + ], + "id": "CDS_3346", + "location": [ + [ + "NC_000913", + 3540163, + "+", + 228 + ] + ], + "md5": "61ceaa21629e14a1c6d3e738e80f3a2b", + "parent_gene": "", + "protein_md5": "b994f7e159789c2d72f9d9ecfbe6ddb1", + "protein_translation": "MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVLRKKDLALLEVEAVSC", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011126" + ], + [ + "gene_synonym", + "ECK3396" + ], + [ + "gene_synonym", + "EcoGene:EG12102" + ], + [ + "gene_synonym", + "GI:16131285" + ], + [ + "gene_synonym", + "GeneID:947919" + ], + [ + "gene_synonym", + "JW3372" + ], + [ + "gene_synonym", + "NP_417868.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33650" + ], + [ + "gene_synonym", + "b3409" + ], + [ + "gene_synonym", + "feoB" + ] + ], + "dna_sequence": "ATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGGCAAGACAACGTTATTTAACCAGCTCACTGGCTCACGTCAGCGTGTAGGTAACTGGGCTGGCGTTACCGTCGAACGTAAAGAAGGGCAATTCTCCACCACCGATCATCAGGTCACGCTGGTGGACCTGCCCGGCACCTATTCTCTGACCACCATCTCATCGCAGACCTCGCTCGATGAGCAAATCGCCTGTCACTACATTTTGAGTGGCGACGCCGACCTGCTGATTAACGTGGTGGATGCGTCTAACCTTGAGCGTAACCTGTACCTGACGCTACAACTGCTGGAACTCGGCATTCCCTGCATTGTGGCACTGAACATGCTCGACATTGCCGAGAAGCAAAATATTCGTATTGAAATTGATGCTCTGTCGGCGCGTCTGGGCTGTCCGGTGATCCCGCTGGTTTCAACCCGTGGTCGCGGTATTGAAGCGCTCAAGCTGGCGATTGATCGCTATAAAGCTAACGAGAATGTGGAACTGGTGCATTACGCACAGCCGCTGCTCAACGAAGCAGATTCACTGGCAAAAGTGATGCCTTCCGACATCCCGCTGAAACAACGTCGCTGGCTGGGCCTGCAAATGCTGGAAGGCGATATCTACAGCCGCGCCTACGCCGGTGAAGCGTCGCAGCATCTGGATGCCGCCCTCGCCCGTCTGCGTAATGAGATGGACGATCCGGCGCTGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGACTATCTTCCTCGCCCAGGGCCTGGGTGGCGGCATTAACACCGTGCTGCCACTGGTGCCGCAGATTGGCATGATGTACCTGTTCCTCTCCTTCCTTGAGGACTCCGGGTATATGGCGCGTGCGGCGTTTGTGATGGACCGTCTGATGCAGGCGCTGGGCTTGCCGGGGAAATCCTTTGTGCCGCTGATCGTCGGTTTCGGTTGTAACGTACCGTCGGTAATGGGTGCACGTACGCTTGATGCACCGCGTGAACGTCTGATGACCATCATGATGGCACCGTTTATGTCCTGCGGCGCGCGTCTGGCTATCTTCGCAGTATTCGCGGCTGCCTTCTTCGGGCAGAACGGTGCGCTGGCGGTCTTCTCGCTGTATATGCTGGGTATTGTGATGGCGGTGCTGACTGGCCTGATGCTCAAGTACACCATCATGCGCGGTGAAGCGACGCCGTTTGTCATGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGATCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAACCTCGGTGAAGAGCTGTTCAGTGCGATAGATGAAACCTGGCAGAGCCTGAAAGACACCTTCAGCCTTAGCGTACTGATGAACCCCATTGAAGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGGGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGTGTGCATTCTGGCGGTTATCCTGTTTAACATCGTGGTTATCGGTCTGCTGCGCCGCGCGCGTAGCCGGGTGGATATCGAACTGCTGGCAACCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCACCACCGGTGATTGCCATTAA", + "dna_sequence_length": 2322, + "functions": [ + "ferrous iron transporter protein B and GTP-binding protein", + "membrane protein" + ], + "id": "CDS_3347", + "location": [ + [ + "NC_000913", + 3540407, + "+", + 2322 + ] + ], + "md5": "1a8d679f5758fccf07a4a866ef817bb4", + "parent_gene": "", + "protein_md5": "b447c2fc523cbb2a620c8d461afbc07b", + "protein_translation": "MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSLKDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH", + "protein_translation_length": 773, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011130" + ], + [ + "gene_synonym", + "ECK3397" + ], + [ + "gene_synonym", + "EcoGene:EG12933" + ], + [ + "gene_synonym", + "GI:16131286" + ], + [ + "gene_synonym", + "GeneID:947918" + ], + [ + "gene_synonym", + "JW3373" + ], + [ + "gene_synonym", + "NP_417869.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64638" + ], + [ + "gene_synonym", + "b3410" + ], + [ + "gene_synonym", + "feoC" + ], + [ + "gene_synonym", + "yhgG" + ] + ], + "dna_sequence": "ATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAA", + "dna_sequence_length": 237, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3348", + "location": [ + [ + "NC_000913", + 3542728, + "+", + 237 + ] + ], + "md5": "5b324f74f8e3f04be2d4649c1551f588", + "parent_gene": "", + "protein_md5": "a92cc032b8a01cb91bacd45a79b194b6", + "protein_translation": "MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011134" + ], + [ + "gene_synonym", + "ECK3398" + ], + [ + "gene_synonym", + "EcoGene:EG11750" + ], + [ + "gene_synonym", + "GI:16131287" + ], + [ + "gene_synonym", + "GeneID:947917" + ], + [ + "gene_synonym", + "JW3374" + ], + [ + "gene_synonym", + "NP_417870.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31667" + ], + [ + "gene_synonym", + "b3411" + ], + [ + "gene_synonym", + "yhgA" + ] + ], + "dna_sequence": "ATGAGCAAAAAGCAGAGTTCCACCCCACACGATGCGCTGTTCAAACTCTTTTTACGCCAACCGGACACGGCTCGTGATTTTCTTGCGTTTCATTTACCGGCACCCATTCACGCGCTTTGTGATATGAAAACCCTCAAGCTGGAGTCGAGCAGCTTTATTGATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTCGGTGAAAACGGAACAAGGACCAGGATACATCTATTGTCTGATTGAACATCAAAGCACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTATCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCGCTGCTGGAGTTAATTCAAAAACATATTCGTCAACGCGACCTGATGGGGCTGGTAGAGCAAATGGCCTGCTTATTAAGTAGTGGATACGCTAATGACAGACAAATCAAAGGGCTGTTTAATTACATACTGCAAACTGGCGACGCTGTACGTTTTAACGATTTTATCGACGGCGTTGCCGAACGTTCACCGAAACACAAGGAGAGTTTAATGACTATTGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCATATAGCCAAAATAATGCTTGAATCCGGAGTTCCTCTTGCAGACATCATGCGCTTTACCGGGCTGTCAGAAGAAGAGTTGGCTGCGGCGAGTCAGTAA", + "dna_sequence_length": 879, + "functions": [ + "transposase_31 family protein" + ], + "id": "CDS_3349", + "location": [ + [ + "NC_000913", + 3543167, + "+", + 879 + ] + ], + "md5": "185c45c44d9df840f739dd37d0d2179a", + "parent_gene": "", + "protein_md5": "19b24c4eff6b087a6b23c2cc6f8a3767", + "protein_translation": "MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLADIMRFTGLSEEELAAASQ", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011136" + ], + [ + "gene_synonym", + "ECK3399" + ], + [ + "gene_synonym", + "EcoGene:EG10122" + ], + [ + "gene_synonym", + "GI:16131288" + ], + [ + "gene_synonym", + "GeneID:947916" + ], + [ + "gene_synonym", + "JW3375" + ], + [ + "gene_synonym", + "NP_417871.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13001" + ], + [ + "gene_synonym", + "b3412" + ], + [ + "gene_synonym", + "bioB" + ], + [ + "gene_synonym", + "bioH" + ] + ], + "dna_sequence": "ATGAATAACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGCTGCTGCACGGATGGGGACTGAATGCCGAAGTGTGGCGTTGCATTGACGAGGAACTTAGCTCGCATTTTACGCTGCACCTTGTTGACCTGCCCGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAGCGTGTTCAGGCGCTGGTCACCGTGGCGTCGTCACCTTGTTTTAGTGCTCGTGACGAGTGGCCGGGGATAAAACCGGACGTGCTGGCGGGATTTCAGCAGCAACTCAGTGATGATTTTCAGCGTACAGTGGAGCGGTTCCTGGCGTTACAAACCATGGGGACTGAAACGGCGCGCCAGGATGCGCGGGCGTTGAAGAAAACCGTTCTGGCGTTACCGATGCCGGAGGTTGACGTGCTTAATGGCGGGCTGGAAATCCTGAAAACGGTCGATCTCCGTCAGCCGCTGCAAAACGTGTCCATGCCGTTTTTGCGATTGTATGGCTATCTCGACGGTCTGGTGCCGCGCAAAGTGGTGCCGATGCTGGATAAACTTTGGCCTCACAGCGAATCATATATCTTCGCCAAAGCGGCCCATGCGCCATTTATTTCGCATCCGGCCGAGTTTTGTCACCTGCTGGTGGCGTTGAAGCAGAGGGTGTAG", + "dna_sequence_length": 771, + "functions": [ + "pimeloyl-ACP methyl ester carboxylesterase" + ], + "id": "CDS_3350", + "location": [ + [ + "NC_000913", + 3544844, + "-", + 771 + ] + ], + "md5": "b047c392388baec770ef32d7217012e8", + "parent_gene": "", + "protein_md5": "90dd4e3546b019c08092479057c66d2b", + "protein_translation": "MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011139" + ], + [ + "gene_synonym", + "ECK3400" + ], + [ + "gene_synonym", + "EcoGene:EG12934" + ], + [ + "gene_synonym", + "GI:90111589" + ], + [ + "gene_synonym", + "GeneID:947915" + ], + [ + "gene_synonym", + "JW5691" + ], + [ + "gene_synonym", + "NP_417872.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46846" + ], + [ + "gene_synonym", + "b3413" + ], + [ + "gene_synonym", + "gntX" + ], + [ + "gene_synonym", + "yhgH" + ] + ], + "dna_sequence": "ATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTATGGCAGCGGCGTCACTGGCGTCGGGGATTTAATCAGAGCGATTTGCTGTGTCAGCCGTTATCACGCTGGTTGCACTGCCAATGGGATAGCGAAGCCGTCACACGTACACGGGCCACTGCGACCCAGCATTTTCTCAGTGCCCGGCTGCGCAAGCGCAACCTGAAAAATGCCTTTCGTCTTGAATTGCCCGTGCAAGGTCGCCATATGGTGATTGTGGATGATGTCGTTACCACCGGAAGTACCGTCGCAGAGATTGCGCAGTTGCTTTTACGCAATGGTGCGGCGGCTGTCCAGGTCTGGTGCCTTTGTCGAACCTTGTAG", + "dna_sequence_length": 684, + "functions": [ + "DNA catabolic protein" + ], + "id": "CDS_3351", + "location": [ + [ + "NC_000913", + 3544882, + "+", + 684 + ] + ], + "md5": "5ea1039fae95a21f975898514fb91f29", + "parent_gene": "", + "protein_md5": "7701cee638126aa337a3aabdb089aac5", + "protein_translation": "MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL", + "protein_translation_length": 227, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011144" + ], + [ + "gene_synonym", + "ECK3401" + ], + [ + "gene_synonym", + "EcoGene:EG12935" + ], + [ + "gene_synonym", + "GI:16131290" + ], + [ + "gene_synonym", + "GeneID:947925" + ], + [ + "gene_synonym", + "JW3377" + ], + [ + "gene_synonym", + "NP_417873.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63020" + ], + [ + "gene_synonym", + "b3414" + ], + [ + "gene_synonym", + "gntY" + ], + [ + "gene_synonym", + "nfuA" + ], + [ + "gene_synonym", + "yhgI" + ] + ], + "dna_sequence": "ATGATCCGTATTTCCGATGCTGCACAAGCGCACTTTGCCAAACTGCTGGCAAATCAGGAAGAAGGGACACAAATCCGCGTATTTGTGATTAACCCTGGCACGCCTAACGCTGAATGTGGCGTTTCTTATTGTCCGCCGGACGCTGTGGAAGCCACCGACACAGCCCTGAAATTTGACCTGCTGACCGCGTATGTTGATGAGTTAAGCGCACCATACCTGGAAGATGCAGAGATCGATTTTGTTACCGACCAGTTGGGTTCCCAGTTAACGCTGAAAGCCCCGAACGCCAAAATGCGTAAAGTGGCAGACGATGCACCGCTGATGGAGCGCGTGGAGTATATGCTGCAGTCGCAGATCAACCCACAGCTTGCTGGTCACGGTGGTCGCGTTTCGCTGATGGAAATCACCGAAGACGGTTACGCCATTCTGCAATTTGGCGGCGGCTGTAACGGTTGTTCCATGGTCGATGTGACGCTGAAAGAAGGGATCGAGAAGCAGCTGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAA", + "dna_sequence_length": 576, + "functions": [ + "Fe/S biogenesis protein, putative scaffold/chaperone protein" + ], + "id": "CDS_3352", + "location": [ + [ + "NC_000913", + 3545624, + "+", + 576 + ] + ], + "md5": "fa52aa866c9d4aa37f54d0f85b2305b2", + "parent_gene": "", + "protein_md5": "8924b747df2ef2fc99fc59d93ddb35c8", + "protein_translation": "MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDLTEHQRGEHSYY", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011148" + ], + [ + "gene_synonym", + "ECK3402" + ], + [ + "gene_synonym", + "EcoGene:EG12380" + ], + [ + "gene_synonym", + "GI:49176350" + ], + [ + "gene_synonym", + "GeneID:947924" + ], + [ + "gene_synonym", + "JW5690" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39835" + ], + [ + "gene_synonym", + "YP_026217.1" + ], + [ + "gene_synonym", + "b3415" + ], + [ + "gene_synonym", + "gntM" + ], + [ + "gene_synonym", + "gntT" + ], + [ + "gene_synonym", + "gntTalpha" + ], + [ + "gene_synonym", + "usgA" + ], + [ + "gene_synonym", + "yhgC" + ] + ], + "dna_sequence": "ATGCCATTAGTCATTGTTGCTATCGGTGTAATCTTGTTGTTGCTCCTGATGATCCGCTTCAAAATGAACGGCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAACGTATCGCCACCACGCTGATTGCCAAATTTGGTAAAAAACACATCCAGTGGGCGGTGGTACTGACCGGTTTTACCGTTGGTTTTGCCCTGTTCTATGAAGTGGGCTTTGTGCTGATGCTGCCGCTGGTGTTTACCATCGCGGCTTCTGCGAATATTCCACTGCTGTATGTTGGTGTACCAATGGCGGCTGCACTGTCTGTGACCCACGGCTTCCTGCCACCGCATCCGGGTCCGACTGCGATTGCCACCATTTTCAATGCCGATATGGGTAAAACCCTGCTGTACGGTACTATTCTGGCAATCCCGACCGTGATTCTCGCCGGTCCGGTTTACGCTCGCGTGTTGAAAGGTATCGATAAGCCAATTCCGGAAGGTCTCTACAGCGCGAAAACCTTCAGCGAAGAAGAGATGCCGAGCTTTGGCGTCAGCGTCTGGACCTCTCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACACGCTGGTTTCTTCCATCAAAATCATTGCGATGATGCTGTTGATCATCGGTGGTGGCGGTGCGTTCAAGCAGGTGCTGGTAGACAGCGGCGTGGACAAATACATTGCTTCCATGATGCACGAAACCAACATTTCTCCGCTGCTGATGGCCTGGTCGATTGCTGCCGTACTGCGTATCGCGCTGGGTTCCGCAACCGTTGCGGCAATCACTGCGGGTGGTATCGCGGCACCGCTGATTGCAACGACGGGTGTTAGCCCGGAGCTGATGGTTATTGCGGTTGGTTCCGGTAGTGTGATTTTCTCTCATGTGAACGATCCGGGCTTCTGGCTGTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGA", + "dna_sequence_length": 1317, + "functions": [ + "gluconate transporter, high-affinity GNT I system" + ], + "id": "CDS_3353", + "location": [ + [ + "NC_000913", + 3546559, + "+", + 1317 + ] + ], + "md5": "19077a8738dc0a6bd443b6464c9ff890", + "parent_gene": "", + "protein_md5": "fc45ab32822cf6d6aa81bfa278b69369", + "protein_translation": "MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI", + "protein_translation_length": 438, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011151" + ], + [ + "gene_synonym", + "ECK3403" + ], + [ + "gene_synonym", + "EcoGene:EG10561" + ], + [ + "gene_synonym", + "GI:16131292" + ], + [ + "gene_synonym", + "GeneID:947923" + ], + [ + "gene_synonym", + "JW3379" + ], + [ + "gene_synonym", + "NP_417875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15977" + ], + [ + "gene_synonym", + "b3416" + ], + [ + "gene_synonym", + "malA" + ], + [ + "gene_synonym", + "malQ" + ] + ], + "dna_sequence": "ATGGAAAGCAAACGTCTGGATAATGCCGCGCTGGCGGCGGGGATTAGCCCCAATTACATCAATGCCCACGGTAAACCGCAGTCGATTAGCGCCGAAACCAAACGGCGTTTGCTTGACGCGATGCATCAACGTACCGCCACGAAAGTGGCGGTAACGCCAGTCCCGAATGTCATGGTTTATACCAGCGGCAAAAAAATGCCGATGGTGGTGGAGGGCAGCGGCGAATATAGCTGGCTGCTGACCACCGAAGAAGGAACGCAGTACAAAGGCCATGTAACGGGGGGCAAAGCGTTCAATCTACCGACGAAGCTGCCGGAAGGTTATCACACGCTGACACTCACCCAGGACGACCAGCGCGCGCATTGCCGGGTGATTGTCGCCCCGAAACGCTGTTACGAACCGCAGGCGTTGCTGAATAAACAAAAGCTGTGGGGTGCCTGCGTTCAGCTTTATACGCTGCGATCGGAAAAAAACTGGGGTATTGGGGATTTTGGCGATCTCAAAGCGATGCTGGTGGATGTGGCAAAACGTGGCGGGTCGTTCATTGGCCTGAACCCGATTCATGCGCTCTATCCGGCAAATCCGGAGAGCGCCAGCCCATACAGCCCGTCTTCTCGCCGTTGGCTGAATGTGATTTATATCGACGTTAACGCCGTTGAAGATTTCCATCTTAGCGAAGAGGCTCAGGCCTGGTGGCAGTTGCCGACCACGCAACAGACGCTGCAACAGGCGCGCGATGCCGACTGGGTCGATTACTCCACGGTTACCGCCCTAAAAATGACAGCATTACGAATGGCGTGGAAAGGTTTCGCGCAACGTGATGATGAGCAGATGGCCGCGTTTCGCCAGTTTGTTGCAGAGCAGGGCGACAGCCTGTTCTGGCAGGCAGCCTTTGATGCGCTACATGCCCAGCAAGTGAAAGAGGACGAAATGCGCTGGGGCTGGCCTGCATGGCCAGAGATGTATCAGAACGTGGATTCACCAGAAGTGCGTCAGTTCTGCGAAGAACATCGTGATGACGTCGATTTTTATCTCTGGTTGCAGTGGCTGGCTTACAGCCAGTTTGCCGCCTGCTGGGAGATAAGCCAGGGCTATGAAATGCCGATTGGCTTGTATCGTGATCTGGCGGTTGGCGTAGCGGAAGGTGGGGCGGAAACCTGGTGTGACCGTGAACTATATTGCCTGAAAGCATCGGTTGGCGCGCCGCCGGATATCCTCGGCCCGTTGGGGCAGAACTGGGGATTACCGCCAATGGACCCGCATATCATCACCGCGCGTGCCTATGAACCGTTTATCGAGCTGTTGCGTGCCAATATGCAAAACTGCGGCGCATTACGAATTGACCATGTGATGTCGATGCTGCGTTTGTGGTGGATACCGTATGGCGAGACGGCAGATCAGGGCGCGTATGTTCACTATCCGGTGGATGATCTGCTCTCGATTCTGGCACTCGAAAGTAAACGTCATCGCTGTATGGTGATTGGTGAAGATCTCGGTACCGTACCGGTAGAGATTGTCGGTAAGCTGCGCAGCAGCGGTGTGTACTCTTACAAAGTGCTCTATTTCGAAAACGACCACGAGAAGACGTTCCGTGCACCGAAAGCGTATCCGGAGCAGTCGATGGCGGTTGCGGCGACACATGACCTGCCAACGCTGCGCGGTTACTGGGAGTGCGGGGATCTAACGCTGGGCAAAACCCTGGGGCTGTATCCGGATGAAGTGGTACTGCGCGGTCTGTATCAGGATCGCGAACTGGCGAAGCAAGGGCTGCTGGATGCACTGCATAAATATGGTTGTCTGCCGAAACGTGCCGGGCATAAGGCATCGTTGATGTCGATGACGCCGACGCTGAACCGTGGTTTGCAGCGCTACATTGCCGACAGTAACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGGATATGGCCGAACCGGTGAATATTCCTGGCACCAGTTACCAGTATAAAAACTGGCGACGCAAGCTTTCCGCAACGCTTGAGTCGATGTTTGCCGATGATGGCGTGAACAAGTTGCTGAAGGATTTGGACAGACGGCGCAGAGCTGCAGCGAAGAAGAAGTAG", + "dna_sequence_length": 2085, + "functions": [ + "4-alpha-glucanotransferase (amylomaltase)" + ], + "id": "CDS_3354", + "location": [ + [ + "NC_000913", + 3550070, + "-", + 2085 + ] + ], + "md5": "6ee19bc485c917c0a57ff6f8d310de19", + "parent_gene": "", + "protein_md5": "025bf6e9366b9f117e0e43629e06cb0c", + "protein_translation": "MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWECGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKDLDRRRRAAAKKK", + "protein_translation_length": 694, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011154" + ], + [ + "gene_synonym", + "ECK3404" + ], + [ + "gene_synonym", + "EcoGene:EG10560" + ], + [ + "gene_synonym", + "GI:49176351" + ], + [ + "gene_synonym", + "GeneID:947922" + ], + [ + "gene_synonym", + "JW5689" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00490" + ], + [ + "gene_synonym", + "YP_026218.1" + ], + [ + "gene_synonym", + "b3417" + ], + [ + "gene_synonym", + "blu" + ], + [ + "gene_synonym", + "malA" + ], + [ + "gene_synonym", + "malP" + ] + ], + "dna_sequence": "ATGTCACAACCTATTTTTAACGATAAGCAATTTCAGGAAGCGCTTTCACGTCAGTGGCAGCGTTATGGCTTAAATTCTGCGGCTGAAATGACTCCTCGCCAGTGGTGGCTAGCAGTGAGTGAAGCACTGGCCGAAATGCTGCGTGCTCAGCCATTCGCCAAGCCGGTGGCGAATCAGCGACATGTTAACTACATCTCAATGGAGTTTTTGATTGGTCGCCTGACGGGCAACAACCTGTTGAATCTCGGCTGGTATCAGGATGTACAGGATTCGTTGAAGGCTTATGACATCAATCTGACGGACCTGCTGGAAGAAGAGATCGACCCGGCGCTGGGTAACGGTGGTCTGGGACGTCTGGCGGCGTGCTTCCTCGACTCAATGGCAACTGTCGGTCAGTCTGCGACGGGTTACGGTCTGAACTATCAATATGGTTTGTTCCGCCAGTCTTTTGTCGATGGCAAACAGGTTGAAGCGCCGGATGACTGGCATCGCAGTAACTACCCGTGGTTCCGCCACAACGAAGCACTGGATGTGCAGGTAGGGATTGGCGGTAAAGTGACGAAAGACGGACGCTGGGAGCCGGAGTTTACCATTACCGGTCAAGCGTGGGATCTCCCCGTTGTCGGCTATCGTAATGGCGTGGCGCAGCCGCTGCGTCTGTGGCAGGCGACGCACGCGCATCCGTTTGATCTGACTAAATTTAACGACGGTGATTTCTTGCGTGCCGAACAGCAGGGCATCAATGCGGAAAAACTGACCAAAGTTCTCTATCCAAACGACAACCATACTGCCGGTAAAAAGCTGCGCCTGATGCAGCAATACTTCCAGTGTGCCTGTTCGGTAGCGGATATTTTGCGTCGCCATCATCTGGCGGGGCGTAAACTGCACGAACTGGCGGATTACGAAGTTATTCAGCTGAACGATACCCACCCAACTATCGCGATTCCAGAACTGCTGCGCGTGCTGATCGATGAGCACCAGATGAGCTGGGATGACGCCTGGGCCATTACCAGCAAAACTTTCGCTTACACCAACCATACCCTGATGCCAGAAGCGCTGGAACGCTGGGATGTGAAACTGGTGAAAGGCTTACTGCCGCGCCACATGCAGATTATTAACGAAATTAATACTCGCTTTAAAACGCTGGTAGAGAAAACCTGGCCGGGCGATGAAAAAGTGTGGGCCAAACTGGCGGTGGTGCACGACAAACAAGTGCATATGGCGAACCTGTGTGTGGTTGGCGGTTTCGCGGTGAACGGTGTTGCGGCGCTGCACTCGGATCTGGTGGTGAAAGATCTGTTCCCGGAATATCACCAGCTATGGCCGAACAAATTCCATAACGTCACCAACGGTATTACCCCACGTCGCTGGATCAAACAGTGCAACCCGGCACTGGCGGCTCTGTTGGATAAATCACTGCAAAAAGAGTGGGCTAACGATCTCGATCAGCTGATCAATCTGGAAAAATTCGCTGATGATGCGAAATTCCGTCAGCAATATCGCGAGATCAAGCAGGCGAATAAAGTCCGTCTGGCGGAGTTTGTGAAAGTTCGTACCGGTATTGAGATCAATCCACAGGCGATTTTCGATATTCAGATCAAACGTTTGCATGAGTACAAACGCCAGCACCTGAATCTGCTGCATATTCTGGCGTTGTACAAAGAAATTCGTGAAAACCCGCAGGCTGATCGCGTACCGCGCGTCTTCCTCTTCGGCGCGAAAGCGGCACCGGGCTACTACCTGGCGAAGAATATTATCTTTGCGATCAACAAAGTGGCTGACGTGATCAACAACGATCCGCTGGTTGGCGATAAGTTGAAGGTGGTGTTCCTGCCGGATTATTGCGTTTCGGCGGCGGAAAAACTGATCCCGGCGGCGGATATCTCCGAACAAATTTCGACTGCAGGTAAAGAAGCTTCCGGTACCGGCAATATGAAACTGGCGCTCAATGGTGCGCTTACTGTCGGTACGCTGGATGGGGCGAACGTTGAAATCGCCGAGAAAGTCGGTGAAGAAAATATCTTTATTTTTGGTCATACCGTGGAACAAGTGAAGGCAATTCTGGCCAAAGGCTACGACCCGGTGAAATGGCGGAAGAAAGATAAGGTGCTGGACGCAGTATTGAAAGAGCTGGAAAGCGGTAAATACAGCGACGGCGATAAGCATGCCTTCGACCAGATGCTGCACAGTATCGGCAAACAGGGCGGCGATCCGTATCTGGTGATGGCGGATTTCGCAGCCTATGTAGAGGCACAAAAGCAGGTGGATGTGCTGTACCGCGACCAGGAGGCCTGGACTCGCGCGGCGATCCTCAATACCGCCCGCTGCGGTATGTTTAGCTCGGATCGCTCTATTCGCGATTATCAGGCTCGTATCTGGCAGGCAAAACGCTAA", + "dna_sequence_length": 2394, + "functions": [ + "maltodextrin phosphorylase" + ], + "id": "CDS_3355", + "location": [ + [ + "NC_000913", + 3552473, + "-", + 2394 + ] + ], + "md5": "cfdf238a74279c4a179b44eff28eb0d0", + "parent_gene": "", + "protein_md5": "73f9cc844db1d636d0c25f1a7990353e", + "protein_translation": "MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR", + "protein_translation_length": 797, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011162" + ], + [ + "gene_synonym", + "ECK3405" + ], + [ + "gene_synonym", + "EcoGene:EG10562" + ], + [ + "gene_synonym", + "GI:16131294" + ], + [ + "gene_synonym", + "GeneID:947921" + ], + [ + "gene_synonym", + "JW3381" + ], + [ + "gene_synonym", + "NP_417877.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06993" + ], + [ + "gene_synonym", + "b3418" + ], + [ + "gene_synonym", + "malA" + ], + [ + "gene_synonym", + "malT" + ] + ], + "dna_sequence": "ATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAAAAACGATATCGGCTGGTACTCGCTGGATGAAGGTGATAACCAGCAAGAGCGTTTCGCCAGCTATCTCATTGCCGCCGTGCAGCAGGCAACCAACGGTCACTGTGCGATATGTGAGACGATGGCGCAAAAACGGCAATATGCCAGCCTGACGTCACTCTTCGCCCAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCCCTCATCACCCGTGTGACCGGCGAAGAAAACGGGCAAATGCGCCTCGAAGAGATTGAGCGTCAGGGGCTGTTTTTACAGCGGATGGATGATACCGGCGAGTGGTTCTGCTATCACCCGCTGTTTGGTAACTTCCTGCGCCAGCGCTGCCAGTGGGAACTGGCGGCGGAGCTGCCGGAAATCCACCGTGCCGCCGCAGAAAGCTGGATGGCCCAGGGATTTCCCAGCGAAGCAATTCATCATGCGCTGGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCGCGCCCAGGTGGCGATTAACGATGGTAATCCGGATGAAGCGGAACGGCTGGCAAAACTGGCACTGGAAGAGCTGCCGCCGGGCTGGTTCTATAGCCGCATTGTGGCAACCTCGGTGCTGGGTGAAGTGCTGCACTGCAAAGGCGAATTGACCCGCTCACTGGCGCTAATGCAGCAAACCGAACAGATGGCACGCCAGCACGATGTCTGGCACTACGCTTTGTGGAGTTTAATCCAGCAAAGTGAAATTCTGTTTGCCCAAGGGTTCCTGCAAACCGCGTGGGAAACGCAGGAAAAAGCATTCCAGCTGATCAACGAGCAGCATCTGGAACAGCTGCCAATGCATGAGTTTCTGGTGCGCATTCGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAATCAACTGTACTGGCAGGCCGGACGTAAAAGTGACGCCCAGCGCGTGTTGCTGGACGCATTAAAACTGGCGAATCGCACCGGATTTATCAGCCATTTTGTCATCGAAGGCGAAGCGATGGCGCAACAACTGCGTCAGCTGATTCAGCTTAATACGCTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAA", + "dna_sequence_length": 2706, + "functions": [ + "mal regulon transcriptional activator" + ], + "id": "CDS_3356", + "location": [ + [ + "NC_000913", + 3553085, + "+", + 2706 + ] + ], + "md5": "bfba302a0dda4eb32cab2c288034a7e0", + "parent_gene": "", + "protein_md5": "56b536cd02ed8a727acb9142344361a3", + "protein_translation": "MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV", + "protein_translation_length": 901, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174104" + ], + [ + "gene_synonym", + "ECK3406" + ], + [ + "gene_synonym", + "EcoGene:EG12938" + ], + [ + "gene_synonym", + "GI:49176352" + ], + [ + "gene_synonym", + "GeneID:2847707" + ], + [ + "gene_synonym", + "JW5688" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46849" + ], + [ + "gene_synonym", + "YP_026219.1" + ], + [ + "gene_synonym", + "b4475" + ], + [ + "gene_synonym", + "rtcA" + ], + [ + "gene_synonym", + "yhgJ" + ], + [ + "gene_synonym", + "yhgK" + ] + ], + "dna_sequence": "ATGAAAAGGATGATTGCGCTGGATGGCGCACAGGGCGAAGGTGGCGGGCAGATCCTGCGCTCGGCGCTGAGCCTGTCGATGATAACCGGCCAGCCATTTACCATCACCAGCATTCGTGCCGGGCGGGCGAAACCGGGGCTGTTGCGCCAGCATCTGACCGCGGTAAAGGCGGCGACGGAAATTTGCGGAGCAACCGTGGAAGGCGCGGAGCTGGGGTCGCAGCGTCTGCTCTTCCGGCCCGGCACCGTGCGCGGCGGCGATTACCGCTTTGCTATCGGTAGCGCCGGAAGTTGTACGCTGGTGCTGCAAACGGTGCTGCCCGCGCTGTGGTTTGCCGATGGACCTTCGCGTGTTGAAGTGAGCGGCGGCACCGATAACCCGTCGGCGCCGCCTGCGGATTTTATCCGCCGGGTGCTGGAGCCGCTGCTGGCGAAAATAGGAATTCATCAGCAAACCACGCTGTTACGCCACGGTTTTTACCCTGCCGGAGGCGGTGTGGTGGCAACGGAAGTCTCGCCCGTGGCATCGTTTAACACCTTGCAACTTGGCGAGCGCGGGAACATTGTGCAGATGCGTGGAGAAGTTCTATTAGCTGGTGTGCCGCGCCATGTTGCTGAGCGTGAAATCGCTACACTGGCGGGGAGTTTTTCCCTGCATGAACAGAATATTCATAACCTGCCGCGCGACCAGGGGCCGGGTAATACCGTCTCGCTTGAAGTCGAAAGTGAAAATATCACCGAACGCTTTTTTGTCGTCGGTGAAAAGCGCGTCAGTGCCGAGGTGGTTGCGGCACAGTTGGTGAAAGAGGTGAAACGCTACCTGGCAAGCACGGCGGCGGTGGGGGAATATCTTGCTGACCAACTGGTGCTACCGATGGCGCTGGCGGGCGCGGGGGAATTTACGGTCGCCCATCCCTCATGCCATCTGCTGACCAATATCGCGGTGGTGGAGCGTTTCTTGCCGGTGCGGTTTAGTTTGATAGAAACAGATGGCGTAACGCGGGTGAGCATTGAATGA", + "dna_sequence_length": 1017, + "functions": [ + "RNA 3'-terminal phosphate cyclase" + ], + "id": "CDS_3357", + "location": [ + [ + "NC_000913", + 3556849, + "-", + 1017 + ] + ], + "md5": "d250a328eb6f29cd4bf7b9ca2efcca85", + "parent_gene": "", + "protein_md5": "0022a6fb53681a7580a4d825014021f4", + "protein_translation": "MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011170" + ], + [ + "gene_synonym", + "ECK3407" + ], + [ + "gene_synonym", + "EcoGene:EG12939" + ], + [ + "gene_synonym", + "GI:16131295" + ], + [ + "gene_synonym", + "GeneID:947929" + ], + [ + "gene_synonym", + "JW3384" + ], + [ + "gene_synonym", + "NP_417879.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46850" + ], + [ + "gene_synonym", + "b3421" + ], + [ + "gene_synonym", + "rtcB" + ], + [ + "gene_synonym", + "yhgL" + ] + ], + "dna_sequence": "ATGAATTACGAATTACTGACCACTGAAAATGCCCCGGTAAAAATGTGGACCAAAGGCGTGCCGGTAGAGGCCGATGCGCGTCAGCAACTTATTAATACGGCGAAGATGCCGTTTATTTTCAAACATATTGCGGTAATGCCTGATGTACACCTGGGTAAAGGTTCCACCATTGGTAGCGTGATCCCGACCAAAGGGGCGATTATTCCGGCGGCGGTGGGCGTGGATATTGGCTGTGGAATGAACGCGCTGCGTACCGCGTTAACGGCGGAAGACCTGCCTGAAAACCTGGCAGAGCTGCGTCAGGCGATTGAAACGGCCGTGCCGCACGGGCGTACCACTGGCCGTTGTAAACGTGATAAAGGTGCCTGGGAAAATCCACCTGTTAACGTCGATGCTAAATGGGCTGAGCTTGAAGCCGGTTATCAGTGGTTAACGCAAAAATATCCCCGTTTCCTGAATACCAATAACTATAAACACCTGGGAACGCTGGGAACCGGTAACCACTTTATTGAAATCTGCCTTGATGAGTCGGACCAGGTGTGGATTATGCTGCACTCCGGTTCACGCGGAATTGGTAACGCCATCGGGACTTACTTTATCGATCTGGCACAAAAAGAGATGCAGGAAACGCTTGAGACGTTGCCGTCGCGTGATCTGGCGTACTTTATGGAAGGTACGGAATACTTTGATGATTACCTGAAAGCCGTGGCCTGGGCGCAGCTTTTTGCCAGCCTTAACCGCGATGCGATGATGGAAAACGTGGTAACGGCATTGCAGAGCATTACGCAGAAAACGGTCAGACAGCCACAAACGCTGGCGATGGAAGAGATCAACTGTCACCACAACTATGTGCAAAAAGAACAGCACTTTGGTGAAGAGATCTACGTGACGCGTAAAGGCGCGGTGTCTGCGCGTGCTGGTCAATATGGAATTATTCCCGGTTCGATGGGAGCAAAAAGCTTTATCGTCCGTGGGCTGGGAAATGAAGAGTCGTTCTGTTCGTGCAGCCACGGTGCCGGGCGGGTAATGAGCCGAACTAAAGCGAAAAAACTGTTCAGCGTGGAAGATCAAATTCGTGCCACCGCGCATGTGGAATGCCGTAAAGATGCCGAAGTGATCGACGAAATCCCGATGGCGTATAAAGATATTGATGCGGTGATGGCGGCACAAAGCGATCTGGTGGAAGTTATCTATACCCTGCGTCAGGTGGTGTGCGTAAAAGGATAA", + "dna_sequence_length": 1227, + "functions": [ + "RNA-splicing ligase" + ], + "id": "CDS_3358", + "location": [ + [ + "NC_000913", + 3558079, + "-", + 1227 + ] + ], + "md5": "6c67854dc9ab00fc4df4a83704af23eb", + "parent_gene": "", + "protein_md5": "8520236d05a6afc2774df1b44cc8a47f", + "protein_translation": "MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011174" + ], + [ + "gene_synonym", + "ECK3408" + ], + [ + "gene_synonym", + "EcoGene:EG12356" + ], + [ + "gene_synonym", + "GI:16131296" + ], + [ + "gene_synonym", + "GeneID:947928" + ], + [ + "gene_synonym", + "JW3385" + ], + [ + "gene_synonym", + "NP_417880.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38035" + ], + [ + "gene_synonym", + "b3422" + ], + [ + "gene_synonym", + "rtcR" + ], + [ + "gene_synonym", + "yhgB" + ] + ], + "dna_sequence": "ATGCGTAAAACAGTGGCTTTTGGCTTTGTCGGTACCGTACTGGATTATGCCGGGCGCGGCAGTCAGCGCTGGTCAAAATGGCGTCCGACACTCTGTTTATGCCAGCAAGAATCGTTGGTCATCGATCGACTGGAATTGTTGCACGACGCCCGCTCGCGCTCGCTATTTGAAACGCTTAAACGCGATATCGCCAGCGTTTCGCCAGAAACAGAAGTGGTGAGCGTTGAGATTGAACTGCATAACCCGTGGGATTTCGAAGAGGTCTACGCCTGCCTGCATGATTTCGCCCGTGGTTACGAGTTTCAGCCAGAAAAAGAAGACTATTTAATTCACATCACCACCGGTACCCACGTCGCGCAGATTTGCTGGTTTCTGCTGGCAGAAGCGCGTTACCTGCCCGCCCGGCTGATACAATCTTCACCTCCGCGCAAAAAAGAACAGCCGCGCGGCCCAGGTGAAGTAACGATTATCGATCTCGATTTAAGCCGTTATAACGCCATCGCCAGCCGCTTTGCCGAGGAACGCCAGCAAACGCTTGATTTTCTTAAGTCCGGCATTGCCACGCGTAACCCCCACTTCAACCGCATGATTGAGCAGATCGAAAAAGTGGCGATCAAATCCCGCGCGCCGATTCTGCTTAACGGTCCAACCGGCGCGGGCAAGTCATTTCTGGCGCGACGCATCTTAGAGTTAAAACAGGCGCGGCATCAGTTTAGCGGCGCGTTTGTGGAAGTGAACTGCGCCACCCTGCGCGGCGATACCGCCATGTCGACGCTGTTTGGTCATGTAAAAGGCGCGTTTACCGGGGCGCGGGAATCTCGTGAAGGTTTATTACGCAGCGCCAACGGCGGAATGTTGTTTCTTGATGAGATTGGCGAACTGGGCGCAGACGAACAGGCAATGCTGCTGAAAGCCATTGAAGAGAAAACCTTTTACCCGTTTGGCAGCGATCGCCAGGTGAGCAGTGATTTTCAGCTTATCGCCGGAACGGTGCGCGATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCGCGCCTGGTTGGCTTTTGCGACCTCTCCCCAGGCAACATGGCGCGGTAACTTTCGCGAACTTTCTGCCAGCGTCACGCGGATGGCCACCTTTGCCACTAGCGGACGCATCACTCTGGACGTGGTTGAAGATGAGATAAACCGTCTGCGCTATAACTGGCAGGAGAGCCGCCCCTCCGCGCTTACGGCGTTGCTGGGCGCAGAGGCAGAAAACATCGATCTCTTCGACCGTATGCAACTGGAACACGTTATCGCTATCTGCCGCCAGGCAAAGTCGCTTTCCGCAGCCGGACGCCAGCTTTTTGACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTGGGAAGCCGTGCAGGATCAGCACAGCTCCAGTTGA", + "dna_sequence_length": 1599, + "functions": [ + "sigma 54-dependent transcriptional regulator of rtcBA expression" + ], + "id": "CDS_3359", + "location": [ + [ + "NC_000913", + 3558268, + "+", + 1599 + ] + ], + "md5": "10d3b76d2e130806b3e2c80b2a495e07", + "parent_gene": "", + "protein_md5": "fe2173d336f7a3424ce24c1189e1e031", + "protein_translation": "MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLKRDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRGPGEVTIIDLDLSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS", + "protein_translation_length": 532, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011176" + ], + [ + "gene_synonym", + "ECK3409" + ], + [ + "gene_synonym", + "EcoGene:EG10400" + ], + [ + "gene_synonym", + "GeneID:947926" + ], + [ + "gene_synonym", + "JW3386" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACL0" + ], + [ + "gene_synonym", + "b3423" + ], + [ + "gene_synonym", + "glpR" + ] + ], + "dna_sequence": "ATGAAACAAACACAACGTCACAACGGTATTATCGAACTGGTTAAACAGCAGGGTTATGTCAGTACCGAAGAGCTGGTAGAGCATTTCTCCGTCAGCCCGCAGACTATTCGCCGCGACCTCAATGAGCTGGCGGAGCAAAACCTGATCCTGCATCATGGCGGTGCGGCGCTGCCTTCCAGTTCGGTTAACACGCCGTGGCACGATCGCAAGGCCACCCAGACCGAAGAAAAAGAGCGCATCGCCCGCAAAGTGGCGGAGCAAATCCCCAATGGCTCGACGCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGGGATAAGCGGCATCGATAGCGACGGCTCGCTGCTGGAGTTCGATTACCACGAAGTTCGCACCAAACGCGCCATTATTGAGAACTCGCGCCACGTTATGCTGGTTGTCGATCACTCGAAATTTGGCCGTAACGCGATGGTCAATATGGGCAGCATCAGCATGGTAGATGCCGTCTACACCGACGCCCCGCCGCCAGTAAGCGTGATGCAGGTGCTGACGGACCACCATATTCAACTGGAGCTGTGCTGA", + "dna_sequence_length": 756, + "id": "CDS_3360", + "location": [ + [ + "NC_000913", + 3560605, + "-", + 150 + ], + [ + "NC_000913", + 3560453, + "-", + 606 + ] + ], + "md5": "1bc7573643b062180c838927ba8bc930", + "parent_gene": "", + "protein_md5": "b38c65d9713896d041c2ad3c1cc3b8c0", + "protein_translation": "MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011179" + ], + [ + "gene_synonym", + "ECK3410" + ], + [ + "gene_synonym", + "EcoGene:EG10397" + ], + [ + "gene_synonym", + "GI:49176353" + ], + [ + "gene_synonym", + "GeneID:947936" + ], + [ + "gene_synonym", + "JW5687" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09391" + ], + [ + "gene_synonym", + "YP_026220.1" + ], + [ + "gene_synonym", + "b3424" + ], + [ + "gene_synonym", + "glpG" + ] + ], + "dna_sequence": "ATGTTGATGATTACCTCTTTTGCTAACCCCCGCGTGGCGCAGGCGTTTGTTGATTACATGGCGACGCAGGGTGTTATCCTCACGATTCAACAACATAACCAAAGCGATGTCTGGCTGGCGGATGAGTCCCAGGCCGAGCGCGTACGGGCGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGATCGCCTGCGTGGTGGTGTTTATTGCCATGCAAATTCTCGGCGATCAGGAAGTGATGTTATGGCTGGCCTGGCCATTCGATCCAACACTGAAATTTGAGTTCTGGCGTTACTTCACCCACGCGTTAATGCACTTCTCGCTGATGCATATCCTCTTTAACCTGCTCTGGTGGTGGTATCTCGGCGGTGCGGTGGAAAAACGCCTCGGTAGCGGTAAGCTAATTGTCATTACGCTTATCAGCGCCCTGTTAAGCGGCTATGTGCAGCAAAAATTCAGCGGGCCGTGGTTTGGCGGGCTTTCTGGCGTGGTGTATGCGCTGATGGGCTACGTCTGGCTACGTGGCGAACGCGATCCGCAAAGTGGCATTTACCTGCAACGTGGGTTAATTATCTTTGCGCTGATCTGGATTGTCGCCGGATGGTTTGATTTGTTTGGGATGTCGATGGCGAACGGAGCACACATCGCCGGGTTAGCCGTGGGTTTAGCGATGGCTTTTGTTGATTCGCTCAATGCGCGAAAACGAAAATAA", + "dna_sequence_length": 831, + "functions": [ + "rhomboid intramembrane serine protease" + ], + "id": "CDS_3361", + "location": [ + [ + "NC_000913", + 3561452, + "-", + 831 + ] + ], + "md5": "d6f547e7b538a5435324e52627ea7f23", + "parent_gene": "", + "protein_md5": "520074778e96358cf1772adade6b56c2", + "protein_translation": "MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011182" + ], + [ + "gene_synonym", + "ECK3411" + ], + [ + "gene_synonym", + "EcoGene:EG10395" + ], + [ + "gene_synonym", + "GI:16131299" + ], + [ + "gene_synonym", + "GeneID:947935" + ], + [ + "gene_synonym", + "JW3388" + ], + [ + "gene_synonym", + "NP_417883.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6V5" + ], + [ + "gene_synonym", + "b3425" + ], + [ + "gene_synonym", + "glpE" + ] + ], + "dna_sequence": "ATGGATCAGTTCGAATGTATTAACGTTGCCGACGCGCACCAGAAGTTGCAGGAAAAAGAGGCGGTGCTGGTCGATATTCGCGATCCACAGAGTTTCGCAATGGGACATGCGGTGCAGGCTTTCCATTTAACCAACGACACGCTGGGCGCTTTTATGCGTGATAACGACTTTGACACTCCGGTGATGGTGATGTGTTATCACGGCAATAGCAGCAAAGGCGCGGCGCAGTATCTGCTGCAACAGGGCTACGATGTGGTCTATAGCATTGACGGCGGCTTTGAAGCCTGGCAACGTCAGTTTCCCGCAGAGGTGGCGTACGGCGCGTAA", + "dna_sequence_length": 327, + "functions": [ + "thiosulfate:cyanide sulfurtransferase (rhodanese)" + ], + "id": "CDS_3362", + "location": [ + [ + "NC_000913", + 3561823, + "-", + 327 + ] + ], + "md5": "c5419d561b9baf7b46ff92adaf1c0ad5", + "parent_gene": "", + "protein_md5": "63e1eaf319be5966e65f1807faa39795", + "protein_translation": "MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011191" + ], + [ + "gene_synonym", + "ECK3412" + ], + [ + "gene_synonym", + "EcoGene:EG10394" + ], + [ + "gene_synonym", + "GI:16131300" + ], + [ + "gene_synonym", + "GeneID:947934" + ], + [ + "gene_synonym", + "JW3389" + ], + [ + "gene_synonym", + "NP_417884.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13035" + ], + [ + "gene_synonym", + "b3426" + ], + [ + "gene_synonym", + "glpD" + ], + [ + "gene_synonym", + "glyD" + ] + ], + "dna_sequence": "ATGGAAACCAAAGATCTGATTGTGATAGGGGGCGGCATCAATGGTGCTGGTATCGCGGCAGACGCCGCTGGACGCGGTTTATCCGTGCTGATGCTGGAGGCGCAGGATCTCGCTTGCGCGACCTCTTCCGCCAGTTCAAAACTCATTCACGGTGGCCTGCGCTACCTTGAGCACTATGAATTCCGCCTGGTCAGCGAGGCGCTGGCTGAACGTGAAGTGCTGCTGAAAATGGCCCCGCATATCGCCTTCCCGATGCGTTTTCGCCTGCCACATCGTCCGCATCTGCGCCCGGCGTGGATGATTCGCATTGGTCTGTTTATGTACGATCATCTGGGTAAACGCACCAGCTTGCCGGGATCAACTGGTTTGCGTTTTGGCGCAAATTCAGTGTTAAAACCGGAAATTAAGCGCGGATTCGAATATTCTGACTGTTGGGTAGACGACGCCCGTCTGGTACTCGCCAACGCCCAGATGGTGGTGCGTAAAGGCGGCGAAGTGCTTACTCGGACTCGCGCCACCTCTGCTCGCCGCGAAAACGGCCTGTGGATTGTGGAAGCGGAAGATATCGATACCGGCAAAAAATATAGCTGGCAAGCGCGCGGCTTGGTTAACGCCACCGGCCCGTGGGTGAAACAGTTCTTCGACGACGGGATGCATCTGCCTTCGCCTTATGGCATTCGCCTGATCAAAGGCAGCCATATTGTGGTGCCGCGCGTGCATACCCAGAAGCAAGCCTACATTCTGCAAAACGAAGATAAACGTATTGTGTTCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCTGGACCTACTCCGGTGTGCGTCCGCTGTGTGATGATGAGTCCGACTCGCCGCAGGCTATTACCCGTGATTACACCCTTGATATTCATGATGAAAATGGCAAAGCACCGCTGCTGTCGGTATTCGGCGGTAAGCTGACCACCTACCGAAAACTGGCGGAACATGCGCTGGAAAAACTAACGCCGTATTATCAGGGTATTGGCCCGGCATGGACGAAAGAGAGTGTGCTACCGGGTGGCGCCATTGAAGGCGACCGCGACGATTATGCCGCTCGCCTGCGCCGCCGCTATCCGTTCCTGACTGAATCGCTGGCGCGTCATTACGCTCGCACTTACGGCAGCAACAGCGAGCTGCTGCTCGGCAATGCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAA", + "dna_sequence_length": 1506, + "functions": [ + "sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding" + ], + "id": "CDS_3363", + "location": [ + [ + "NC_000913", + 3562013, + "+", + 1506 + ] + ], + "md5": "31f0321c3f1b3899574b0781c3f62ee9", + "parent_gene": "", + "protein_md5": "2fb29250ca463e57e91ca70040b47bb5", + "protein_translation": "METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS", + "protein_translation_length": 501, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011194" + ], + [ + "gene_synonym", + "ECK3413" + ], + [ + "gene_synonym", + "EcoGene:EG14434" + ], + [ + "gene_synonym", + "GeneID:947933" + ], + [ + "gene_synonym", + "JW3390" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76692" + ], + [ + "gene_synonym", + "b3427" + ], + [ + "gene_synonym", + "yzgL" + ] + ], + "dna_sequence": "ATGCAAAACAGAAAATGGATTTTGACCTCGCTGGTAATGACTTTTTTCGGCATCCCCATACTGGCGCAATTTTTGGCGGTGGTTATTGCCATGCTGGGTGTCGGACTTGCCGGTATTATTGAAGTTTGTAATATCCTTATCACGCCAACAATTTACCTTCTGCTCAAAATTTTTATGCTGGCGCTGGGCGCATTAATGCTATTTTTCTCGGGGCGAGTG", + "dna_sequence_length": 219, + "id": "CDS_3364", + "location": [ + [ + "NC_000913", + 3564005, + "-", + 219 + ] + ], + "md5": "68920371a37481a404dd03b233e55152", + "parent_gene": "", + "protein_md5": "3453b5d15210162f10ce19d01f779367", + "protein_translation": "MQNRKWILTSLVMTFFGIPILAQFLAVVIAMLGVGLAGIIEVCNILITPTIYLLLKIFMLALGALMLFFSGRV", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011198" + ], + [ + "gene_synonym", + "ECK3414" + ], + [ + "gene_synonym", + "EcoGene:EG10380" + ], + [ + "gene_synonym", + "GI:16131302" + ], + [ + "gene_synonym", + "GeneID:947931" + ], + [ + "gene_synonym", + "JW3391" + ], + [ + "gene_synonym", + "NP_417886.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC86" + ], + [ + "gene_synonym", + "b3428" + ], + [ + "gene_synonym", + "glgP" + ], + [ + "gene_synonym", + "glgY" + ] + ], + "dna_sequence": "ATGAATGCTCCGTTTACATATTCATCGCCCACGCTTAGCGTAGAAGCTCTTAAGCACTCTATCGCTTACAAGCTGATGTTTACGATTGGAAAGGACCCGGTCGTCGCCAATAAACATGAATGGCTGAACGCAACGTTATTTGCTGTGCGCGATCGTCTCGTGGAGCGCTGGTTACGTTCAAACCGTGCCCAGTTGTCGCAAGAAACTCGTCAGGTTTACTACCTGTCGATGGAGTTTTTGATTGGCCGTACGCTCTCCAACGCCATGTTGTCGCTAGGAATTTACGAAGATGTACAGGGCGCACTGGAAGCGATGGGGTTAAATCTCGAAGAGCTGATTGATGAAGAAAATGACCCAGGCCTCGGTAACGGTGGCCTGGGACGTCTGGCGGCTTGCTTCCTTGATTCTCTGGCGACGTTAGGGTTGCCGGGGCGCGGTTACGGCATCCGCTATGACTACGGTATGTTCAAGCAGAACATCGTTAACGGTAGCCAGAAAGAGTCGCCAGACTACTGGCTGGAATACGGTAACCCGTGGGAATTCAAACGCCACAACACGCGCTATAAAGTCCGTTTTGGCGGTCGCATTCAGCAGGAAGGTAAAAAAACGCGCTGGATTGAAACCGAAGAGATTCTGGGAGTCGCTTACGATCAGATAATCCCTGGTTACGACACCGACGCGACCAACACGCTGCGTTTGTGGAGTGCGCAAGCCAGTAGCGAAATTAACCTCGGTAAATTCAACCAGGGTGACTACTTCGCGGCAGTGGAAGATAAAAACCACTCCGAGAACGTATCTCGCGTACTGTATCCGGATGACTCCACCTACTCCGGGCGTGAGCTGCGCCTGCGTCAGGAATACTTCCTGGTTTCCTCGACCATTCAGGACATTTTAAGCCGCCATTATCAGTTGCATAAAACCTACGATAACCTGGCGGATAAAATCGCGATTCATCTCAATGATACCCATCCGGTACTGTCGATTCCTGAGATGATGCGTCTGCTGATCGATGAGCACCAATTTAGCTGGGACGACGCGTTTGAGGTGTGTTGTCAGGTCTTCTCCTACACTAACCACACGCTGATGAGCGAGGCGCTGGAAACCTGGCCGGTTGATATGCTGGGTAAAATTCTGCCGCGTCACCTGCAGATCATCTTTGAAATCAACGACTATTTCCTGAAAACCTTGCAGGAACAGTATCCGAACGATACCGATCTGCTGGGACGGGCGTCGATCATTGATGAATCCAACGGTCGTCGTGTGCGTATGGCCTGGCTGGCGGTTGTTGTGAGCCACAAAGTTAACGGTGTATCGGAACTGCACTCTAATCTGATGGTGCAATCGTTGTTTGCCGACTTTGCGAAAATCTTCCCGGGTCGTTTCACCAACGTCACCAACGGTGTGACGCCGCGTCGCTGGCTGGCGGTAGCGAACCCATCGCTTTCAGCCGTGCTGGACGAACACCTGGGCCGTAACTGGCGCACCGACCTTAGCCTGCTTAATGAGCTGCAACAACACTGTGATTTCCCAATGGTTAATCACGCTGTGCATCAGGCGAAGCTGGAGAACAAAAAGCGTCTGGCAGAGTATATCGCCCAGCAGCTGAATGTGGTGGTGAATCCAAAGGCGTTGTTCGATGTACAAATCAAACGTATTCACGAATACAAACGTCAATTGATGAATGTGTTGCATGTGATTACCCGCTATAACCGCATCAAGGCCGACCCGGATGCGAAGTGGGTACCGCGCGTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCATTTGATCAATGACGTAGCGAAAGTGATCAACAACGATCCGCAGATTGGCGATAAGCTGAAAGTCGTGTTCATCCCGAACTACAGCGTTAGCCTGGCGCAGTTGATCATTCCGGCGGCAGATCTGTCTGAACAGATTTCGCTGGCAGGGACGGAAGCTTCCGGCACCAGTAACATGAAGTTTGCGCTTAACGGTGCGCTGACTATCGGTACGTTGGACGGTGCGAATGTCGAGATGCTGGATCATGTCGGTGCTGACAATATCTTTATTTTTGGTAACACAGCGGAAGAAGTGGAAGAACTGCGTCGTCAGGGCTACAAACCGCGTGAATACTACGAGAAAGATGAGGAGCTGCATCAGGTGCTGACGCAAATCGGCAGCGGTGTATTCAGTCCGGAAGATCCGGGTCGCTATCGCGATCTGGTTGATTCGCTGATCAACTTCGGCGATCACTACCAGGTACTGGCGGATTATCGCAGCTATGTCGATTGTCAGGATAAAGTCGATGAACTCTACGAGCTTCAGGAAGAGTGGACCGCAAAAGCGATGCTGAACATTGCCAATATGGGCTACTTCTCTTCTGACCGTACTATCAAAGAGTACGCCGATCATATCTGGCATATCGATCCGGTGAGATTGTAA", + "dna_sequence_length": 2448, + "functions": [ + "glycogen phosphorylase" + ], + "id": "CDS_3365", + "location": [ + [ + "NC_000913", + 3566581, + "-", + 2448 + ] + ], + "md5": "bbb22aeaabf2d40cf5251b242b62825c", + "parent_gene": "", + "protein_md5": "7db619436cc0d6bd65e97e46e4f5de58", + "protein_translation": "MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGALEAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL", + "protein_translation_length": 815, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011200" + ], + [ + "gene_synonym", + "ECK3415" + ], + [ + "gene_synonym", + "EcoGene:EG10377" + ], + [ + "gene_synonym", + "GI:16131303" + ], + [ + "gene_synonym", + "GeneID:947932" + ], + [ + "gene_synonym", + "JW3392" + ], + [ + "gene_synonym", + "NP_417887.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U8" + ], + [ + "gene_synonym", + "b3429" + ], + [ + "gene_synonym", + "glgA" + ] + ], + "dna_sequence": "ATGCAGGTTTTACATGTATGTTCAGAGATGTTCCCGCTGCTTAAAACCGGCGGTCTGGCTGATGTTATTGGGGCATTACCCGCAGCACAAATCGCAGACGGCGTTGACGCTCGCGTACTGTTGCCTGCATTTCCCGATATTCGCCGTGGCGTGACCGATGCGCAGGTAGTATCCCGTCGTGATACCTTCGCCGGACATATCACGCTGTTGTTCGGTCATTACAACGGGGTTGGCATTTACCTGATTGACGCGCCGCATCTCTATGATCGTCCGGGAAGCCCGTATCACGATACCAACTTATTTGCCTATACCGACAACGTATTGCGTTTTGCGCTGCTGGGGTGGGTTGGGGCAGAAATGGCCAGCGGGCTTGACCCATTCTGGCGTCCTGATGTGGTGCATGCGCACGACTGGCATGCAGGCCTTGCGCCTGCGTATCTGGCGGCGCGCGGGCGTCCGGCGAAGTCGGTGTTTACTGTGCACAACCTGGCCTATCAAGGCATGTTTTATGCACATCACATGAATGACATCCAATTGCCATGGTCATTCTTTAATATTCATGGGCTGGAATTCAACGGACAAATCTCTTTCCTGAAGGCCGGTCTGTACTATGCCGATCACATTACGGCGGTCAGTCCAACCTACGCTCGCGAGATCACCGAACCGCAGTTTGCCTACGGTATGGAAGGTCTGTTGCAACAGCGTCACCGTGAAGGGCGTCTTTCCGGCGTACTGAACGGCGTGGACGAGAAAATCTGGAGTCCAGAGACGGACTTACTGTTGGCCTCGCGTTACACCCGCGATACGTTGGAAGATAAAGCGGAAAATAAGCGCCAGTTACAAATCGCAATGGGGCTTAAGGTTGACGATAAAGTGCCGCTTTTTGCAGTGGTGAGCCGTCTGACCAGCCAGAAAGGTCTCGACCTGGTGCTGGAAGCCTTACCGGGTCTTCTGGAGCAGGGCGGGCAGCTGGCGCTACTCGGCGCGGGCGATCCGGTGCTGCAGGAAGGTTTCCTTGCGGCGGCAGCGGAATACCCCGGTCAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCTGGTGCCCAGCCGTTTTGAACCGTGCGGCTTAACGCAACTTTATGGATTGAAGTACGGTACGCTGCCGTTAGTGCGGCGCACCGGTGGGCTTGCTGATACGGTTTCTGACTGTTCTCTTGAGAACCTTGCAGATGGCGTCGCCAGTGGGTTTGTCTTTGAAGATAGTAATGCCTGGTCGCTGTTACGGGCTATTCGACGTGCTTTTGTACTGTGGTCCCGTCCTTCACTGTGGCGGTTTGTGCAACGTCAGGCTATGGCAATGGATTTTAGCTGGCAGGTCGCGGCGAAGTCGTACCGTGAGCTTTACTATCGCTTGAAATAG", + "dna_sequence_length": 1434, + "functions": [ + "glycogen synthase" + ], + "id": "CDS_3366", + "location": [ + [ + "NC_000913", + 3568033, + "-", + 1434 + ] + ], + "md5": "d338653046b3873bccaacb7f289fc00b", + "parent_gene": "", + "protein_md5": "838205352281ee3792f39070eaba1e18", + "protein_translation": "MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK", + "protein_translation_length": 477, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011204" + ], + [ + "gene_synonym", + "ECK3416" + ], + [ + "gene_synonym", + "EcoGene:EG10379" + ], + [ + "gene_synonym", + "GI:16131304" + ], + [ + "gene_synonym", + "GeneID:947942" + ], + [ + "gene_synonym", + "JW3393" + ], + [ + "gene_synonym", + "NP_417888.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6V1" + ], + [ + "gene_synonym", + "b3430" + ], + [ + "gene_synonym", + "glgC" + ] + ], + "dna_sequence": "ATGGTTAGTTTAGAGAAGAACGATCACTTAATGTTGGCGCGCCAGCTGCCATTGAAATCTGTTGCCCTGATACTGGCGGGAGGACGTGGTACCCGCCTGAAGGATTTAACCAATAAGCGAGCAAAACCGGCCGTACACTTCGGCGGTAAGTTCCGCATTATCGACTTTGCGCTGTCTAACTGCATCAACTCCGGGATCCGTCGTATGGGCGTGATCACCCAGTACCAGTCCCACACTCTGGTGCAGCACATTCAGCGCGGCTGGTCATTCTTCAATGAAGAAATGAACGAGTTTGTCGATCTGCTGCCAGCACAGCAGAGAATGAAAGGGGAAAACTGGTATCGCGGCACCGCAGATGCGGTCACCCAAAACCTCGACATTATCCGCCGTTATAAAGCGGAATACGTGGTGATCCTGGCGGGCGACCATATCTACAAGCAAGACTACTCGCGTATGCTTATCGATCACGTCGAAAAAGGCGCACGTTGCACCGTTGCTTGTATGCCAGTACCGATTGAAGAAGCCTCCGCATTTGGCGTTATGGCGGTTGATGAGAACGATAAAATTATCGAATTCGTTGAAAAACCTGCTAACCCGCCGTCAATGCCGAACGATCCGAGCAAATCTCTGGCGAGTATGGGTATCTACGTCTTTGACGCCGACTATCTGTATGAACTGCTGGAAGAAGACGATCGCGATGAGAACTCCAGCCACGACTTTGGCAAAGATTTGATTCCCAAGATCACCGAAGCCGGTCTGGCCTATGCGCACCCGTTCCCGCTCTCTTGCGTACAATCCGACCCGGATGCCGAGCCGTACTGGCGCGATGTGGGTACGCTGGAAGCTTACTGGAAAGCGAACCTCGATCTGGCCTCTGTGGTGCCGGAACTGGATATGTACGATCGCAATTGGCCAATTCGCACCTACAATGAATCATTACCGCCAGCGAAATTCGTGCAGGATCGCTCCGGTAGCCACGGGATGACCCTTAACTCACTGGTTTCCGGCGGTTGTGTGATCTCCGGTTCGGTGGTGGTGCAGTCCGTTCTGTTCTCGCGCGTTCGCGTGAATTCATTCTGCAACATTGATTCCGCCGTATTGTTACCGGAAGTATGGGTAGGTCGCTCGTGCCGTCTGCGCCGCTGCGTCATCGATCGTGCTTGTGTTATTCCGGAAGGCATGGTGATTGGTGAAAACGCAGAGGAAGATGCACGTCGTTTCTATCGTTCAGAAGAAGGCATCGTGCTGGTAACGCGCGAAATGCTACGGAAGTTAGGGCATAAACAGGAGCGATAA", + "dna_sequence_length": 1296, + "functions": [ + "glucose-1-phosphate adenylyltransferase" + ], + "id": "CDS_3367", + "location": [ + [ + "NC_000913", + 3569328, + "-", + 1296 + ] + ], + "md5": "a4f3862ec353572ac032e39e9d722da1", + "parent_gene": "", + "protein_md5": "f1dee98dc68e3f06069a54029dbd5aa2", + "protein_translation": "MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER", + "protein_translation_length": 431, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011206" + ], + [ + "gene_synonym", + "ECK3417" + ], + [ + "gene_synonym", + "EcoGene:EG10381" + ], + [ + "gene_synonym", + "GI:16131305" + ], + [ + "gene_synonym", + "GeneID:947941" + ], + [ + "gene_synonym", + "JW3394" + ], + [ + "gene_synonym", + "NP_417889.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15067" + ], + [ + "gene_synonym", + "b3431" + ], + [ + "gene_synonym", + "glgX" + ] + ], + "dna_sequence": "ATGACACAACTCGCCATTGGCAAACCCGCTCCCCTCGGCGCGCATTACGACGGTCAGGGCGTCAACTTCACACTTTTCTCCGCTCATGCCGAGCGGGTAGAACTGTGTGTCTTTGACGCCAATGGCCAGGAACATCGCTATGACTTGCCAGGGCACAGTGGCGACATTTGGCACGGTTATCTGCCGGATGCGCGCCCGGGTTTGCGTTATGGTTATCGCGTTCATGGCCCCTGGCAACCCGCCGAGGGGCATCGCTTTAACCCGGCGAAGTTGTTGATTGATCCTTGCGCGCGGCAAATTGACGGGGAGTTTAAAGATAACCCGCTGCTGCACGCCGGTCATAATGAACCTGACTATCGCGACAACGCCGCCATTGCGCCGAAATGCGTAGTGGTGGTTGATCACTATGACTGGGAAGATGATGCCCCGCCGCGCACGCCGTGGGGCAGCACCATCATTTATGAAGCCCATGTCAAAGGATTAACGTACTTGCACCCGGAGATCCCGGTCGAGATCCGTGGCACTTATAAAGCCCTCGGGCATCCGGTGATGATCAACTATTTGAAACAATTGGGCATTACCGCGCTGGAACTGCTGCCAGTGGCGCAGTTTGCCAGTGAACCACGTCTGCAACGCATGGGGCTAAGTAACTACTGGGGTTACAACCCGGTGGCGATGTTTGCGCTGCATCCGGCGTATGCCTGCTCGCCAGAAACGGCGCTGGATGAGTTTCGCGATGCAATCAAAGCACTGCATAAAGCGGGTATCGAAGTCATTCTTGATATCGTGCTCAACCATAGTGCGGAACTGGACCTCGACGGCCCGTTATTCTCGCTGCGTGGGATCGATAACCGTAGCTATTATTGGATAAGAGAAGACGGCGATTATCACAACTGGACCGGTTGCGGCAACACGCTCAATTTGAGTCATCCGGCGGTGGTGGATTATGCCAGCGCCTGCCTGCGTTATTGGGTAGAAACCTGCCACGTCGATGGTTTCCGCTTTGATCTGGCGGCAGTCATGGGCCGTACGCCAGAGTTCCGTCAGGATGCGCCGTTGTTTACCGCTATCCAGAACTGCCCGGTGCTCTCGCAGGTGAAGTTAATTGCTGAACCGTGGGATATCGCTCCTGGTGGTTATCAGGTGGGAAATTTCCCGCCGCTGTTTGCCGAGTGGAACGATCATTTCCGCGATGCTGCCCGTCGTTTCTGGCTACATTATGATTTGCCTCTGGGGGCGTTTGCCGGGCGTTTTGCTGCCTCCAGCGATGTTTTTAAACGTAATGGTCGTCTGCCGAGTGCCGCGATTAATCTCGTCACCGCGCATGACGGTTTTACGCTTCGCGACTGCGTTTGCTTCAACCATAAACACAATGAAGCAAACGGAGAAGAAAATCGCGACGGGACCAACAACAATTACAGTAACAATCATGGTAAAGAAGGGTTAGGCGGTTCTCTTGACCTGGTTGAACGGCGGCGCGACAGCATTCACGCCCTGTTAACAACGTTGTTGCTCTCCCAGGGTACGCCGATGTTACTGGCCGGTGACGAACATGGTCACAGCCAGCATGGCAATAACAATGCCTACTGTCAGGATAACCAATTAACCTGGTTGGACTGGTCGCAGGCAAGCAGTGGTTTAACCGCATTTACCGCCGCGTTAATCCATCTGCGCAAGCGCATTCCCGCTTTGGTGGAGAATCGCTGGTGGGAAGAAGGCGACGGCAATGTCCGTTGGCTAAATCGATATGCTCAACCTTTAAGCACGGATGAGTGGCAAAACGGGCCGAAACAGCTGCAAATTCTGCTCTCGGATCGCTTTTTGATCGCAATTAACGCCACGCTTGAGGTAACAGAGATTGTTTTACCTGCTGGGGAGTGGCACGCCATTCCCCCATTCGCTGGAGAGGATAACCCAGTGATTACGGCTGTCTGGCAGGGACCTGCACACGGATTGTGTGTGTTCCAGAGATGA", + "dna_sequence_length": 1974, + "functions": [ + "glycogen debranching enzyme" + ], + "id": "CDS_3368", + "location": [ + [ + "NC_000913", + 3571319, + "-", + 1974 + ] + ], + "md5": "4e984e6ac8d9b3f7874d20767cd45ead", + "parent_gene": "", + "protein_md5": "9200a015191de23ab4a1a9692e141366", + "protein_translation": "MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR", + "protein_translation_length": 657, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011209" + ], + [ + "gene_synonym", + "ECK3418" + ], + [ + "gene_synonym", + "EcoGene:EG10378" + ], + [ + "gene_synonym", + "GI:16131306" + ], + [ + "gene_synonym", + "GeneID:947940" + ], + [ + "gene_synonym", + "JW3395" + ], + [ + "gene_synonym", + "NP_417890.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07762" + ], + [ + "gene_synonym", + "b3432" + ], + [ + "gene_synonym", + "glgB" + ] + ], + "dna_sequence": "ATGTCCGATCGTATCGATAGAGACGTGATTAACGCGCTAATTGCAGGCCATTTTGCGGATCCTTTTTCCGTACTGGGAATGCATAAAACCACCGCGGGACTGGAAGTCCGTGCCCTTTTACCCGACGCTACCGATGTGTGGGTGATTGAACCGAAAACCGGGCGCAAACTCGCAAAACTGGAGTGTCTCGACTCACGGGGATTCTTTAGCGGCGTCATTCCGCGACGTAAGAATTTTTTCCGCTATCAGTTGGCTGTTGTCTGGCATGGTCAGCAAAACCTGATTGATGATCCTTACCGTTTTGGTCCGCTAATCCAGGAAATGGATGCCTGGCTATTATCTGAAGGTACTCACCTGCGCCCGTATGAAACCTTAGGCGCGCATGCAGATACTATGGATGGCGTCACAGGTACGCGTTTCTCTGTCTGGGCTCCAAACGCCCGTCGGGTCTCGGTGGTTGGGCAATTCAACTACTGGGACGGTCGCCGTCACCCGATGCGCCTGCGTAAAGAGAGCGGCATCTGGGAACTGTTTATCCCTGGGGCGCATAACGGTCAGCTCTATAAATACGAGATGATTGATGCCAATGGCAACTTGCGTCTGAAGTCCGACCCTTATGCCTTTGAAGCGCAAATGCGCCCGGAAACCGCGTCTCTTATTTGCGGGCTGCCGGAAAAGGTTGTACAGACTGAAGAGCGCAAAAAAGCGAATCAGTTTGATGCGCCAATCTCTATTTATGAAGTTCACCTGGGTTCCTGGCGTCGCCACACCGACAACAATTTCTGGTTGAGCTACCGCGAGCTGGCCGATCAACTGGTGCCTTATGCTAAATGGATGGGCTTTACCCACCTCGAACTACTGCCCATTAACGAGCATCCCTTCGATGGCAGTTGGGGTTATCAGCCAACCGGCCTGTATGCGCCAACCCGCCGTTTTGGTACTCGCGACGACTTCCGTTATTTCATTGATGCCGCACACGCAGCTGGTCTGAACGTGATTCTCGACTGGGTGCCAGGCCACTTCCCGACTGATGACTTTGCGCTTGCCGAATTTGATGGCACGAACTTGTATGAACACAGCGATCCGCGTGAAGGCTATCATCAGGACTGGAACACGCTGATCTACAACTATGGTCGCCGTGAAGTCAGTAACTTCCTCGTCGGTAACGCGCTTTACTGGATTGAACGTTTTGGTATTGATGCGCTGCGCGTCGATGCGGTGGCGTCAATGATTTATCGCGACTACAGCCGTAAAGAGGGGGAGTGGATCCCGAACGAATTTGGCGGGCGCGAGAATCTTGAAGCGATTGAATTCTTGCGTAATACCAACCGTATTCTTGGTGAGCAGGTTTCCGGTGCGGTGACAATGGCTGAGGAGTCTACCGATTTCCCTGGCGTTTCTCGTCCGCAGGATATGGGCGGTCTGGGCTTCTGGTACAAGTGGAACCTCGGCTGGATGCATGACACCCTGGACTACATGAAGCTCGACCCGGTTTATCGTCAGTATCATCACGATAAACTGACCTTCGGGATTCTCTACAACTACACTGAAAACTTCGTCCTGCCGTTGTCGCATGATGAAGTGGTCCACGGTAAAAAATCGATTCTCGACCGCATGCCGGGCGACGCATGGCAGAAATTCGCGAACCTGCGCGCCTACTATGGCTGGATGTGGGCATTCCCGGGCAAGAAACTACTGTTCATGGGTAACGAATTTGCCCAGGGCCGCGAGTGGAACCATGACGCCAGCCTCGACTGGCATCTGTTGGAAGGCGGCGATAACTGGCACCACGGTGTCCAGCGTCTGGTGCGCGATCTGAACCTCACCTACCGCCACCATAAAGCAATGCATGAACTGGATTTTGACCCGTACGGCTTTGAATGGCTGGTGGTGGATGACAAAGAACGCTCGGTGCTGATCTTTGTGCGTCGCGATAAAGAGGGTAACGAAATCATCGTTGCCAGTAACTTTACGCCGGTACCGCGTCATGATTATCGCTTCGGCATAAACCAGCCGGGCAAATGGCGTGAAATCCTCAATACCGATTCCATGCACTATCACGGCAGTAATGCAGGCAATGGCGGCACGGTACACAGCGATGAGATTGCCAGCCACGGTCGTCAGCATTCACTAAGCCTGACGCTACCACCGCTGGCCACTATCTGGCTGGTTCGGGAGGCAGAATGA", + "dna_sequence_length": 2187, + "functions": [ + "1,4-alpha-glucan branching enzyme" + ], + "id": "CDS_3369", + "location": [ + [ + "NC_000913", + 3573502, + "-", + 2187 + ] + ], + "md5": "59c5a3c967b2976ba897e034ae0ab43d", + "parent_gene": "", + "protein_md5": "e4686fc466af9047d254e77709e9fcd6", + "protein_translation": "MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE", + "protein_translation_length": 728, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011211" + ], + [ + "gene_synonym", + "ECK3419" + ], + [ + "gene_synonym", + "EcoGene:EG10088" + ], + [ + "gene_synonym", + "GI:16131307" + ], + [ + "gene_synonym", + "GeneID:947939" + ], + [ + "gene_synonym", + "JW3396" + ], + [ + "gene_synonym", + "NP_417891.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Q9" + ], + [ + "gene_synonym", + "asd" + ], + [ + "gene_synonym", + "b3433" + ], + [ + "gene_synonym", + "dap" + ], + [ + "gene_synonym", + "hom" + ] + ], + "dna_sequence": "ATGAAAAATGTTGGTTTTATCGGCTGGCGCGGTATGGTCGGCTCCGTTCTCATGCAACGCATGGTTGAAGAGCGCGACTTCGACGCCATTCGCCCTGTCTTCTTTTCTACTTCTCAGCTTGGCCAGGCTGCGCCGTCTTTTGGCGGAACCACTGGCACACTTCAGGATGCCTTTGATCTGGAGGCGCTAAAGGCCCTCGATATCATTGTGACCTGTCAGGGCGGCGATTATACCAACGAAATCTATCCAAAGCTTCGTGAAAGCGGATGGCAAGGTTACTGGATTGACGCAGCATCGTCTCTGCGCATGAAAGATGACGCCATCATCATTCTTGACCCCGTCAATCAGGACGTCATTACCGACGGATTAAATAATGGCATCAGGACTTTTGTTGGCGGTAACTGTACCGTAAGCCTGATGTTGATGTCGTTGGGTGGTTTATTCGCCAATGATCTTGTTGATTGGGTGTCCGTTGCAACCTACCAGGCCGCTTCCGGCGGTGGTGCGCGACATATGCGTGAGTTATTAACCCAGATGGGCCATCTGTATGGCCATGTGGCAGATGAACTCGCGACCCCGTCCTCTGCTATTCTCGATATCGAACGCAAAGTCACAACCTTAACCCGTAGCGGTGAGCTGCCGGTGGATAACTTTGGCGTGCCGCTGGCGGGTAGCCTGATTCCGTGGATCGACAAACAGCTCGATAACGGTCAGAGCCGCGAAGAGTGGAAAGGGCAGGCGGAAACCAACAAGATCCTCAACACATCTTCCGTAATTCCGGTAGATGGTTTATGTGTGCGTGTCGGGGCATTGCGCTGCCACAGCCAGGCATTCACTATTAAATTGAAAAAAGATGTGTCTATTCCGACCGTGGAAGAACTGCTGGCTGCGCACAATCCGTGGGCGAAAGTCGTTCCGAACGATCGGGAAATCACTATGCGTGAGCTAACCCCAGCTGCCGTTACCGGCACGCTGACCACGCCGGTAGGCCGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAA", + "dna_sequence_length": 1104, + "functions": [ + "aspartate-semialdehyde dehydrogenase, NAD(P)-binding" + ], + "id": "CDS_3370", + "location": [ + [ + "NC_000913", + 3574878, + "-", + 1104 + ] + ], + "md5": "b3c2d7fe23eca6bf0c5db2c724ea7753", + "parent_gene": "", + "protein_md5": "6214d45ce9b8a0c398874acaee29688e", + "protein_translation": "MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011216" + ], + [ + "gene_synonym", + "ECK3420" + ], + [ + "gene_synonym", + "EcoGene:EG12941" + ], + [ + "gene_synonym", + "GI:16131308" + ], + [ + "gene_synonym", + "GeneID:947938" + ], + [ + "gene_synonym", + "JW3397" + ], + [ + "gene_synonym", + "NP_417892.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67143" + ], + [ + "gene_synonym", + "b3434" + ], + [ + "gene_synonym", + "yhgN" + ] + ], + "dna_sequence": "ATGAATGAAATCATTTCTGCAGCAGTTTTATTGATCCTGATTATGGATCCGCTCGGAAACCTACCTATTTTCATGTCCGTACTGAAACATACTGAACCGAAAAGACGGCGGGCAATCATGGTGCGAGAGTTGCTTATTGCTCTCCTGGTGATGCTGGTGTTCCTGTTTGCGGGTGAGAAAATTCTGGCATTTCTTAGCCTACGAGCAGAAACCGTCTCCATTTCTGGCGGCATCATTCTGTTTCTGATCGCCATTAAAATGATTTTCCCCAGCGCTTCAGGAAATAGCAGCGGGCTTCCGGCAGGTGAAGAGCCATTTATCGTGCCGTTGGCAATTCCGTTAGTCGCCGGGCCGACTATTCTCGCCACGCTGATGTTGTTGTCTCATCAGTACCCGAATCAGATGGGGCATCTGGTGATTGCTCTGCTGCTGGCCTGGGGCGGCACCTTTGTCATCCTGCTACAGTCTTCGCTATTTTTACGTCTGCTGGGCGAGAAAGGGGTGAACGCACTTGAACGCCTGATGGGATTGATTCTGGTGATGATGGCAACCCAGATGTTCCTCGACGGCATTCGAATGTGGATGAAGGGGTAA", + "dna_sequence_length": 594, + "functions": [ + "UPF0056 family inner membrane protein" + ], + "id": "CDS_3371", + "location": [ + [ + "NC_000913", + 3575071, + "+", + 594 + ] + ], + "md5": "6f483b01c63cf4291e03531ceb7d1963", + "parent_gene": "", + "protein_md5": "ebb53170606a348b7e6b3f6c96c87a3b", + "protein_translation": "MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174105" + ], + [ + "gene_synonym", + "ECK3421" + ], + [ + "gene_synonym", + "EcoGene:EG12631" + ], + [ + "gene_synonym", + "GI:49176355" + ], + [ + "gene_synonym", + "GeneID:2847760" + ], + [ + "gene_synonym", + "JW5686" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC96" + ], + [ + "gene_synonym", + "YP_026221.1" + ], + [ + "gene_synonym", + "b4476" + ], + [ + "gene_synonym", + "gntU" + ] + ], + "dna_sequence": "GTGACTACATTAACGCTTGTTTTAACAGCAGTAGGGTCTGTTTTACTGCTGCTGTTTTTAGTCATGAAGGCGCGTATGCACGCTTTCCTGGCTTTAATGGTGGTGTCCATGGGGGCTGGCCTTTTTTCTGGTATGCCGCTCGATAAAATCGCAGCGACGATGGAAAAAGGGATGGGAGGCACCCTCGGCTTCCTGGCGGTGGTTGTCGCCCTGGGAGCTATGTTTGGCAAGATCTTACATGAAACCGGCGCAGTCGATCAGATTGCCGTCAAAATGCTCAAATCCTTCGGTCACAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTTGCAGGCGTGGCGGCAGCGGCGGCATTTCTGGTGCCTGGACCAGCGCCGATGCTGCTGGCATCGCAGATGAATGCCGACTTTGGCTGGATGATCCTGATTGGCCTGTGTGCGGCAATTCCGGGAATGATTATTGCCGGGCCGCTGTGGGGTAACTTCATCAGCCGTTACGTTGAGCTGCATATTCCTGACGACATCAGCGAACCGCATCTCGGCGAAGGCAAAATGCCATCTTTCGGATTCAGCCTGTCGCTGATCCTGCTGCCGCTGGTGCTGGTAGGGCTGAAAACCATTGCCGCGCGTTTTGTGCCGGAAGGATCAACTGCTTACGAATGGTTTGAGTTTATCGGTCATCCGTTTACCGCGATTCTGGTTGCTTGTCTGGTGGCGATTTACGGTCTGGCAATGCGTCAGGGCATGCCAAAAGACAAAGTGATGGAGATTTGCGGTCACGCGCTGCAACCGGCGGGGATCATTCTGCTGGTGATTGGTGCGGGCGGCGTGTTCAAACAGGTGCTGGTTGACTCTGGCGTAGGTCCGGCACTGGGCGAAGCGTTAACCGGCATGGGCCTGCCGATTGCTATCACCTGCTTCGTGCTGGCAGCTGCAGTGCGCATCATTCAGGGTTCTGCCACCGTAGCCTGTTTAACGGCGGTAGGACTGGTGATGCCGGTTATTGAACAACTGAACTACTCCGGTGCGCAAATGGCGGCGCTGTCGATTTGTATCGCTGGTGGTTCGATTGTTGTCAGCCACGTTAACGACGCCGGTTTCTGGTTGTTCGGTAAATTTACCGGCGCGACCGAAGCCGAAACGCTGAAAACCTGGACCATGATGGAAACCATCCTCGGCACTGTCGGTGCCATCGTTGGGATGATTGCGTTCCAGCTGTTGAGTTAA", + "dna_sequence_length": 1341, + "functions": [ + "gluconate transporter, low affinity GNT 1 system" + ], + "id": "CDS_3372", + "location": [ + [ + "NC_000913", + 3577061, + "-", + 1341 + ] + ], + "md5": "f7a75fee18bc2200fe704526bdc17971", + "parent_gene": "", + "protein_md5": "782dcc17f9410baf1c03624374d31c94", + "protein_translation": "MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011224" + ], + [ + "gene_synonym", + "ECK3422" + ], + [ + "gene_synonym", + "EcoGene:EG12629" + ], + [ + "gene_synonym", + "GI:90111591" + ], + [ + "gene_synonym", + "GeneID:947937" + ], + [ + "gene_synonym", + "JW3400" + ], + [ + "gene_synonym", + "NP_417894.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46859" + ], + [ + "gene_synonym", + "b3437" + ], + [ + "gene_synonym", + "gntK" + ] + ], + "dna_sequence": "TTGAGCACGACTAACCATGATCACCACATTTACGTCTTGATGGGCGTATCGGGCAGCGGCAAATCTGCGGTCGCCAGTGAAGTGGCGCATCAACTTCATGCCGCGTTTCTTGATGGCGATTTCCTCCATCCACGGCGCAATATCGAAAAAATGGCGTCTGGCGAACCACTGAATGACGACGATCGCAAACCGTGGTTGCAGGCGCTGAACGACGCCGCGTTTGCTATGCAGCGCACTAATAAAGTGTCGCTGATCGTCTGTTCTGCATTGAAAAAACACTATCGCGACTTGCTGCGTGAAGGTAATCCGAATCTCTCTTTCATCTATTTGAAAGGCGATTTTGATGTGATTGAAAGCCGCCTGAAAGCGCGCAAAGGCCATTTCTTTAAAACCCAAATGTTGGTGACGCAGTTTGAAACGCTGCAGGAGCCGGGTGCGGACGAAACCGATGTACTGGTGGTGGATATCGATCAACCGCTGGAAGGTGTTGTGGCAAGCACCATTGAGGTTATTAAAAAAGGCAAATAA", + "dna_sequence_length": 528, + "functions": [ + "gluconate kinase 2" + ], + "id": "CDS_3373", + "location": [ + [ + "NC_000913", + 3577592, + "-", + 528 + ] + ], + "md5": "300c6777c15068b05b61eed62ef35da9", + "parent_gene": "", + "protein_md5": "e927716d011bc5440f5b1c440190fd30", + "protein_translation": "MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKKGK", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011226" + ], + [ + "gene_synonym", + "ECK3423" + ], + [ + "gene_synonym", + "EcoGene:EG12630" + ], + [ + "gene_synonym", + "GI:49176356" + ], + [ + "gene_synonym", + "GeneID:947946" + ], + [ + "gene_synonym", + "JW5946" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACP5" + ], + [ + "gene_synonym", + "YP_026222.1" + ], + [ + "gene_synonym", + "b3438" + ], + [ + "gene_synonym", + "gntR" + ] + ], + "dna_sequence": "ATGAAAAAGAAAAGACCCGTACTTCAGGATGTGGCTGACCGTGTAGGCGTGACCAAAATGACGGTCAGCCGTTTTTTACGCAACCCGGAGCAGGTTTCCGTCGCTCTACGCGGCAAGATTGCCGCGGCTCTTGATGAACTGGGCTATATTCCCAATCGTGCGCCCGATATCCTCTCTAACGCCACCAGCCGGGCGATTGGCGTCCTGTTACCTTCTCTCACCAACCAGGTTTTCGCGGAAGTATTACGCGGAATCGAAAGCGTCACCGACGCGCACGGTTATCAGACCATGCTGGCGCACTACGGTTATAAACCGGAAATGGAGCAAGAACGCCTCGAATCCATGCTCTCCTGGAATATCGACGGCCTGATCCTCACCGAACGTACCCACACGCCGCGCACCTTAAAGATGATTGAAGTGGCGGGTATTCCCGTGGTGGAACTGATGGACAGCAAGTCGCCATGCCTTGATATCGCCGTCGGTTTTGATAACTTTGAAGCAGCACGCCAGATGACCACTGCCATTATTGCTCGCGGGCATCGCCACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGGCGATGCTGGATGCAGGCCTGGTGCCATATAGCGTGATGGTTGAGCAATCTTCTTCTTACTCTTCCGGTATTGAACTGATTCGCCAGGCGCGGCGGGAATATCCGCAGCTGGATGGCGTGTTCTGTACGAATGATGACCTGGCGGTCGGCGCGGCGTTTGAATGTCAGCGTCTGGGGTTAAAAGTTCCTGACGATATGGCGATTGCCGGTTTCCACGGTCATGACATTGGTCAGGTGATGGAGCCACGACTTGCGAGCGTGCTGACGCCGCGTGAGCGGATGGGCAGTATTGGCGCTGAACGCCTGCTGGCGCGTATTCGTGGCGAATCTGTGACACCGAAAATGTTAGATTTAGGTTTCACCTTGTCACCGGGCGGATCTATTTAA", + "dna_sequence_length": 996, + "functions": [ + "d-gluconate inducible gluconate regulon transcriptional repressor" + ], + "id": "CDS_3374", + "location": [ + [ + "NC_000913", + 3578726, + "-", + 996 + ] + ], + "md5": "64edee9b7929fc70d25f19d5cab42456", + "parent_gene": "", + "protein_md5": "3bc30c6e0efeb551e706ffa51cd07ed6", + "protein_translation": "MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011228" + ], + [ + "gene_synonym", + "ECK3424" + ], + [ + "gene_synonym", + "EcoGene:EG12943" + ], + [ + "gene_synonym", + "GI:16131311" + ], + [ + "gene_synonym", + "GeneID:947945" + ], + [ + "gene_synonym", + "JW3402" + ], + [ + "gene_synonym", + "NP_417896.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46852" + ], + [ + "gene_synonym", + "b3439" + ], + [ + "gene_synonym", + "yhhW" + ] + ], + "dna_sequence": "ATGATCTACTTACGCAAAGCAAATGAACGTGGTCATGCAAATCATGGCTGGCTGGACTCCTGGCATACTTTCTCTTTTGCCAACTATTACGATCCGAACTTTATGGGCTTCTCCGCGCTGCGCGTGATTAACGACGACGTGATTGAAGCAGGGCAGGGCTTCGGCACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGGTGAGTTCCAGATTATGAGTGCTGGTACGGGTATTCGTCACTCAGAGTACAACCCAAGCAGCACCGAGCGTCTGCATCTGTATCAGATCTGGATCATGCCTGAAGAAAACGGTATTACGCCGCGTTATGAACAGCGTCGCTTCGATGCCGTACAGGGCAAACAGCTGGTGCTCTCGCCGGATGCGCGAGATGGTTCATTGAAAGTGCATCAGGATATGGAACTGTACCGCTGGGCGTTGCTGAAAGATGAGCAGTCGGTGCATCAGATTGCCGCTGAACGCCGCGTCTGGATCCAGGTGGTGAAAGGCAATGTCACCATTAACGGCGTGAAAGCCTCGACCAGCGATGGTCTGGCAATCTGGGATGAGCAGGCAATCTCCATCCATGCGGATAGCGACAGCGAAGTGTTACTGTTCGATCTGCCGCCGGTTTAA", + "dna_sequence_length": 696, + "functions": [ + "quercetinase activity in vitro" + ], + "id": "CDS_3375", + "location": [ + [ + "NC_000913", + 3579645, + "-", + 696 + ] + ], + "md5": "e1d98b4f006a5f9f766142bc5b84ec51", + "parent_gene": "", + "protein_md5": "3f062636bed0cf06fa22e81645b5893b", + "protein_translation": "MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011232" + ], + [ + "gene_synonym", + "ECK3425" + ], + [ + "gene_synonym", + "EcoGene:EG12944" + ], + [ + "gene_synonym", + "GI:16131312" + ], + [ + "gene_synonym", + "GeneID:947944" + ], + [ + "gene_synonym", + "JW3403" + ], + [ + "gene_synonym", + "NP_417897.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46853" + ], + [ + "gene_synonym", + "b3440" + ], + [ + "gene_synonym", + "yhhX" + ] + ], + "dna_sequence": "ATGGTCATCAACTGCGCCTTTATTGGCTTCGGCAAAAGCACCACCCGTTACCATCTGCCGTATGTACTTAACCGCAAGGATAGCTGGCATGTCGCGCATATTTTTCGTCGCCATGCGAAGCCGGAAGAACAGGCTCCCATTTATTCCCATATCCATTTCACCAGCGATCTCGACGAAGTACTAAACGATCCCGATGTTAAGCTGGTTGTTGTCTGCACCCACGCGGACAGCCATTTCGAGTACGCGAAACGCGCGCTGGAAGCCGGGAAAAATGTGCTGGTCGAAAAACCGTTCACTCCGACACTTGCGCAGGCGAAAGAGCTGTTTGCGTTGGCGAAAAGCAAAGGGCTGACCGTCACGCCGTATCAGAATCGTCGCTTTGACTCCTGCTTCCTGACAGCGAAAAAAGCGATTGAAAGTGGCAAGTTGGGAGAGATTGTTGAAGTGGAAAGCCATTTTGACTATTACCGCCCGGTGGCAGAAACCAAACCTGGGCTGCCGCAGGATGGCGCGTTTTATGGCCTTGGTGTGCATACGATGGACCAGATTATTTCTCTGTTCGGTCGCCCGGATCACGTCGCTTATGACATCCGCAGCCTGCGTAATAAAGCCAATCCTGACGACACCTTTGAAGCGCAACTGTTTTATGGCGACCTGAAAGCCATCGTCAAAACCAGCCATCTGGTGAAAATCGATTATCCGAAATTTATCGTTCACGGTAAGAAAGGTTCGTTTATTAAATACGGTATCGACCAGCAGGAAACCAGCCTGAAGGCTAATATTATGCCGGGCGAACCGGGATTCGCAGCGGATGATTCGGTCGGTGTGCTGGAGTATGTCAATGACGAGGGCGTGACGGTCAGAGAAGAGATGAAGCCGGAGATGGGCGATTACGGGCGCGTTTATGATGCGTTGTATCAAACCATCACCCACGGTGCGCCAAATTACGTCAAGGAATCTGAAGTTCTTACCAATCTGGAAATCCTTGAACGCGGATTTGAGCAAGCCTCTCCCTCCACAGTAACTCTCGCTAAGTAA", + "dna_sequence_length": 1038, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_3376", + "location": [ + [ + "NC_000913", + 3580805, + "-", + 1038 + ] + ], + "md5": "d5a2a130bed2cbae4da6466b6bf2047e", + "parent_gene": "", + "protein_md5": "4a37b1205d96b07b9f0e47e33b8e4e86", + "protein_translation": "MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTLAK", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011240" + ], + [ + "gene_synonym", + "ECK3427" + ], + [ + "gene_synonym", + "EcoGene:EG12945" + ], + [ + "gene_synonym", + "GI:16131313" + ], + [ + "gene_synonym", + "GeneID:947943" + ], + [ + "gene_synonym", + "JW3405" + ], + [ + "gene_synonym", + "NP_417898.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46854" + ], + [ + "gene_synonym", + "b3441" + ], + [ + "gene_synonym", + "yhhY" + ] + ], + "dna_sequence": "ATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCAGATTCACGCCCAGCCGGAGGTGTATTGCAACACACTACAGGTGCCTCATCCTTCCGATCATATGTGGCAGGAGCGACTCGCCGATCGTCCCGGCATCAAGCAACTCGTCGCCTGTATTGATGGAGACGTCGTGGGCCATCTCACCATTGACGTGCAACAGCGCCCACGCCGCAGTCATGTTGCCGATTTTGGTATCTGTGTCGACTCTCGTTGGAAGAACCGCGGCGTCGCCAGCGCCCTGATGCGAGAGATGATTGAAATGTGCGACAACTGGTTGCGGGTAGATCGCATTGAACTAACCGTGTTTGTCGATAACGCCCCGGCAATTAAGGTCTATAAAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATTATATGGCGCGGGTGAAGTAA", + "dna_sequence_length": 489, + "functions": [ + "aminoacyl nucleotide detoxifying acetyltransferase" + ], + "id": "CDS_3377", + "location": [ + [ + "NC_000913", + 3581138, + "+", + 489 + ] + ], + "md5": "3b179446f75b42c9b4b3f3cbaaf9cb02", + "parent_gene": "", + "protein_md5": "5d8fd3de559e92be1c9ef0c239fa637b", + "protein_translation": "MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011244" + ], + [ + "gene_synonym", + "ECK3428" + ], + [ + "gene_synonym", + "EcoGene:EG12946" + ], + [ + "gene_synonym", + "GI:16131314" + ], + [ + "gene_synonym", + "GeneID:947952" + ], + [ + "gene_synonym", + "JW3406" + ], + [ + "gene_synonym", + "NP_417899.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46855" + ], + [ + "gene_synonym", + "b3442" + ], + [ + "gene_synonym", + "yhhZ" + ] + ], + "dna_sequence": "ATGAGTAATATTGTTTACCTGACAGTAACGGGAGAACAACAAGGAAGCATCTCCGCAGGTTGTGGGACTTCTGAGTCTACAGGTAATCGTTGGCAGAGCGGGCATGAGGATGAAATATTTACATTCTCACTCTTAAATAATATTAATAATACGGGGCTTGGTTCACAGTTCCATGGTATAACATTTTGTAAATTAATTGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCTATTTGGCACTCCCTGAAAATTATAACCGTTTGTTTTTACCAAATTCAAAAAACCAAACAAATAATCGTTTCAAAACGTTAAACAGCAAAGCTATTGGCAGGCTACTTGCTGCTGGTGGCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTAAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAGTTACTTAGGCAAACTTAGAGGTCAACAAAAACTTCTTGATGGTATAGACATAATAGAAATAATATACATTAAGAGACCTTCAAAAGACTTAGCTAACTTACGAAAGGAGTTTAATAAAACTGTAAGAAAAAATTTTCTTATCAAACTTGCAAAAACCTCCGAAGCATCTGGAAGATTCAACGCCGAAGACCTTTTAAGAATGAGAAAGGGCAATGTTCCTCTAAATTATAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAAAACGAACCATATCATAAAGTTTTTACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGA", + "dna_sequence_length": 1179, + "functions": [ + "putative Hcp1 family polymorphic toxin protein", + "putative colicin-like DNase/tRNase activity" + ], + "id": "CDS_3378", + "location": [ + [ + "NC_000913", + 3581863, + "+", + 1179 + ] + ], + "md5": "460b349627b4e7c87be167ec449c0cf1", + "parent_gene": "", + "protein_md5": "2bbfd6cee16862bbce7d6cebf7225f77", + "protein_translation": "MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011246" + ], + [ + "gene_synonym", + "ECK3429" + ], + [ + "gene_synonym", + "EcoGene:EG12947" + ], + [ + "gene_synonym", + "GeneID:947951" + ], + [ + "gene_synonym", + "JW5864" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46856" + ], + [ + "gene_synonym", + "b3443" + ], + [ + "gene_synonym", + "yrhA" + ] + ], + "dna_sequence": "ATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGCACCGCTCAAGGAATCATTTATTGAAAGTATAATCCAAATAGAATTTAATTCTAATTCAACTAATTGCCTGGAGAAGTTATGTAATGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAA", + "dna_sequence_length": 495, + "id": "CDS_3379", + "location": [ + [ + "NC_000913", + 3583038, + "+", + 381 + ], + [ + "NC_000913", + 3584196, + "+", + 114 + ] + ], + "md5": "c5dc8b4b71e39c50242f276299604fdf", + "parent_gene": "", + "protein_md5": "58b0706f0cc20753f64c12a0daff17a6", + "protein_translation": "MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSISIFTYDIKSNFFEIRDNIGTENIFSSFSDFSSFLNEIMDSCS", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011249" + ], + [ + "gene_synonym", + "ECK4556" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16131316" + ], + [ + "gene_synonym", + "GeneID:947950" + ], + [ + "gene_synonym", + "NP_417901.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF11" + ], + [ + "gene_synonym", + "b3444" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_3380", + "location": [ + [ + "NC_000913", + 3583483, + "+", + 276 + ] + ], + "md5": "db0d756792984c1e534a2dad9bfdde5f", + "parent_gene": "", + "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011251" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16131317" + ], + [ + "gene_synonym", + "GeneID:947949" + ], + [ + "gene_synonym", + "NP_417902.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF28" + ], + [ + "gene_synonym", + "b3445" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_3381", + "location": [ + [ + "NC_000913", + 3583677, + "+", + 504 + ] + ], + "md5": "9b3b0a523236fbbb94e9a150e2349e7c", + "parent_gene": "", + "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", + "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011255" + ], + [ + "gene_synonym", + "ECK3430" + ], + [ + "gene_synonym", + "EcoGene:EG12948" + ], + [ + "gene_synonym", + "GI:16131318" + ], + [ + "gene_synonym", + "GeneID:947948" + ], + [ + "gene_synonym", + "JW3411" + ], + [ + "gene_synonym", + "NP_417903.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46857" + ], + [ + "gene_synonym", + "b3446" + ], + [ + "gene_synonym", + "yrhB" + ] + ], + "dna_sequence": "ATGATTACTTATCACGACGCATTCGCGAAAGCGAACCATTACCTTGATGATGCAGATCTCCCGGTCGTCATTACTCTACATGGACGCTTTAGCCAGGGCTGGTATTTCTGTTTCGAAGCACGAGAATTTCTCGAAACTGGAGATGAGGCCGCGCGCTTAGCTGGTAACGCACCTTTTATTATTGATAAAGACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGA", + "dna_sequence_length": 285, + "functions": [ + "stable heat shock chaperone" + ], + "id": "CDS_3382", + "location": [ + [ + "NC_000913", + 3584759, + "+", + 285 + ] + ], + "md5": "84eef6c154ca3e1064bde7eccc7bc5f4", + "parent_gene": "", + "protein_md5": "32dda504b11ad96e8f1f2b64f9169ddd", + "protein_translation": "MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAGNAPFIIDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP", + "protein_translation_length": 94, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011257" + ], + [ + "gene_synonym", + "ECK3431" + ], + [ + "gene_synonym", + "EcoGene:EG10374" + ], + [ + "gene_synonym", + "GI:16131319" + ], + [ + "gene_synonym", + "GeneID:947947" + ], + [ + "gene_synonym", + "JW3412" + ], + [ + "gene_synonym", + "NP_417904.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18956" + ], + [ + "gene_synonym", + "b3447" + ], + [ + "gene_synonym", + "ggt" + ] + ], + "dna_sequence": "ATGATAAAACCGACGTTTTTACGCCGGGTGGCCATTGCTGCTCTGCTCTCAGGAAGTTGTTTTAGCGCCGCCGCCGCGCCTCCTGCGCCGCCCGTCTCGTATGGTGTGGAGGAAGATGTCTTCCACCCGGTACGCGCGAAACAGGGAATGGTAGCGTCTGTGGACGCCACTGCCACTCAGGTGGGGGTGGATATTCTCAAGGAGGGCGGGAATGCCGTTGATGCCGCCGTGGCGGTGGGCTACGCGCTGGCGGTAACGCATCCGCAGGCAGGGAATCTGGGCGGTGGTGGTTTTATGTTAATCCGCTCGAAAAATGGCAATACCACGGCTATCGATTTCCGCGAAATGGCACCCGCCAAAGCGACCCGCGATATGTTCCTCGATGATCAGGGCAACCCGGACAGCAAAAAATCACTCACTTCGCATCTGGCTTCCGGCACACCGGGTACGGTAGCAGGTTTCTCGCTGGCGCTGGATAAATACGGCACCATGCCGCTGAACAAAGTCGTGCAGCCCGCGTTTAAACTGGCACGCGATGGTTTTATCGTTAACGACGCGCTGGCTGACGATCTCAAAACCTACGGTAGCGAAGTGTTGCCGAATCACGAAAACAGTAAAGCTATCTTCTGGAAAGAGGGCGAGCCGCTGAAAAAGGGCGACACGCTGGTGCAGGCGAACCTGGCAAAGAGCCTGGAGATGATTGCTGAAAACGGCCCGGACGAATTCTATAAAGGCACGATTGCGGAACAGATCGCCCAGGAGATGCAGAAAAACGGTGGCTTGATCACTAAAGAAGATTTAGCAGCCTATAAAGCGGTCGAACGCACTCCGATAAGCGGCGATTATCGCGGGTATCAGGTTTACTCCATGCCACCGCCATCCTCCGGCGGGATCCATATCGTACAAATCCTCAATATTCTGGAAAACTTCGATATGAAGAAATACGGCTTTGGCAGCGCCGATGCGATGCAAATCATGGCAGAAGCGGAGAAATACGCCTACGCCGACCGCTCGGAATATCTTGGCGACCCGGATTTTGTCAAAGTACCGTGGCAGGCGCTGACCAATAAAGCCTATGCCAAATCTATTGCCGATCAAATTGATATCAATAAAGCGAAGCCATCCAGCGAAATTCGCCCCGGCAAGCTTGCGCCTTATGAGAGTAATCAAACTACCCATTACTCAGTGGTGGATAAAGATGGTAACGCGGTGGCGGTGACCTATACGCTGAACACCACCTTCGGTACGGGCATTGTCGCGGGCGAGAGCGGTATTCTGCTTAATAACCAGATGGATGATTTCTCCGCCAAACCGGGCGTACCGAACGTTTACGGGCTGGTGGGCGGTGATGCCAACGCCGTCGGGCCGAACAAACGCCCGCTGTCGTCGATGTCGCCGACCATTGTGGTGAAAGACGGTAAAACCTGGCTGGTTACCGGTAGCCCAGGCGGTAGCCGGATCATCACTACAGTGCTGCAAATGGTGGTGAATAGCATCGATTATGGCTTGAACGTCGCCGAAGCGACCAATGCGCCGCGTTTCCACCATCAGTGGTTGCCGGACGAGCTGCGTGTCGAAAAAGGGTTTAGCCCGGATACGCTCAAGCTGCTGGAAGCAAAAGGTCAGAAAGTGGCGCTGAAAGAGGCGATGGGCAGTACACAAAGCATTATGGTTGGGCCGGACGGTGAGTTGTACGGCGCATCCGACCCGCGCTCGGTGGATGATTTAACGGCGGGGTACTAA", + "dna_sequence_length": 1743, + "functions": [ + "gamma-glutamyltranspeptidase" + ], + "id": "CDS_3383", + "location": [ + [ + "NC_000913", + 3586823, + "-", + 1743 + ] + ], + "md5": "22972e59fde22ae4863c1d902d160a33", + "parent_gene": "", + "protein_md5": "40e647b1949eab55361ef659527913a0", + "protein_translation": "MIKPTFLRRVAIAALLSGSCFSAAAAPPAPPVSYGVEEDVFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYGASDPRSVDDLTAGY", + "protein_translation_length": 580, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011262" + ], + [ + "gene_synonym", + "ECK3432" + ], + [ + "gene_synonym", + "EcoGene:EG11184" + ], + [ + "gene_synonym", + "GI:16131320" + ], + [ + "gene_synonym", + "GeneID:947956" + ], + [ + "gene_synonym", + "JW3413" + ], + [ + "gene_synonym", + "NP_417905.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADX7" + ], + [ + "gene_synonym", + "b3448" + ], + [ + "gene_synonym", + "yhhA" + ] + ], + "dna_sequence": "ATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCATTTAGAAAACCAGATAAACAATAATTCTCAGCGGGTGTTGCAGTCACAGCCGGGGGAGCGAAATCCCGCCCGGCAGCAAATGCTGCCCAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAA", + "dna_sequence_length": 441, + "functions": [ + "DUF2756 family protein" + ], + "id": "CDS_3384", + "location": [ + [ + "NC_000913", + 3586943, + "+", + 441 + ] + ], + "md5": "5f0165b8935689af6abfcb291bdf2e05", + "parent_gene": "", + "protein_md5": "73cf2129d481318202345c58426cbd8b", + "protein_translation": "MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011264" + ], + [ + "gene_synonym", + "ECK3433" + ], + [ + "gene_synonym", + "EcoGene:EG11050" + ], + [ + "gene_synonym", + "GI:16131321" + ], + [ + "gene_synonym", + "GeneID:947955" + ], + [ + "gene_synonym", + "JW3414" + ], + [ + "gene_synonym", + "NP_417906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10908" + ], + [ + "gene_synonym", + "b3449" + ], + [ + "gene_synonym", + "ugpQ" + ] + ], + "dna_sequence": "ATGAGTAACTGGCCTTATCCCCGCATCGTCGCTCATCGTGGCGGCGGTAAGCTGGCCCCGGAAAACACCCTGGCGTCAATCGACGTCGGGGCAAAATACGGTCATAAGATGATCGAATTTGACGCGAAGTTATCGAAAGATGGCGAGATCTTCCTGCTCCATGACGACAATCTCGAACGTACCAGCAACGGCTGGGGCGTCGCGGGTGAACTGAACTGGCAGGATTTACTGCGCGTGGATGCGGGCAGTTGGTACAGCAAAATGTTTAAAGGTGAGCCGCTACCGTTGCTTTCGCAGGTGGCGGAACGTTGCCGCGAACACGGGATGATGGCGAATATCGAAATCAAACCCACCACCGGCACCGGGCCATTAACGGGCAAAATGGTGGCGCTGGCGGCACGCGAGCTGTGGGCCGGTATGACGCCGCCGCTGCTGTCATCGTTTGAGATTGATGCTTTAGAAGCTGCACAACAGGCGGCACCGGAACTGCCGCGCGGTTTGTTGCTGGATGAGTGGCGCGACGACTGGCGCGAACTGACCGCGCGGCTGGGCTGCGTCTCTATTCATCTCAATCATAAGTTACTCAATAAAGCGCGAGTGATGCAGTTGAAAGACGCCGGACTGCGGATTCTGGTTTATACCGTCAATAAACCCCAGCGCGCAGCAGAGTTGCTGCGCTGGGGTGTGGATTGCATCTGTACCGATGCGATTGACGTGATTGGTCCGAACTTTACGGCCCAATAG", + "dna_sequence_length": 744, + "functions": [ + "glycerophosphodiester phosphodiesterase, cytosolic" + ], + "id": "CDS_3385", + "location": [ + [ + "NC_000913", + 3588113, + "-", + 744 + ] + ], + "md5": "272005e04c1548f83cbb95f66f70a967", + "parent_gene": "", + "protein_md5": "176e7c3c071d87d4579f9055e91b7f23", + "protein_translation": "MSNWPYPRIVAHRGGGKLAPENTLASIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKMFKGEPLPLLSQVAERCREHGMMANIEIKPTTGTGPLTGKMVALAARELWAGMTPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLNKARVMQLKDAGLRILVYTVNKPQRAAELLRWGVDCICTDAIDVIGPNFTAQ", + "protein_translation_length": 247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011266" + ], + [ + "gene_synonym", + "ECK3434" + ], + [ + "gene_synonym", + "EcoGene:EG11048" + ], + [ + "gene_synonym", + "GI:90111593" + ], + [ + "gene_synonym", + "GeneID:947953" + ], + [ + "gene_synonym", + "JW3415" + ], + [ + "gene_synonym", + "NP_417907.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10907" + ], + [ + "gene_synonym", + "b3450" + ], + [ + "gene_synonym", + "ugpC" + ] + ], + "dna_sequence": "ATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCTGGCTGCGGGAAATCGACGCTGCTGCGCATGGTTGCCGGGCTGGAGCGGGTGACAGAAGGCGATATCTGGATCAACGACCAGCGCGTGACTGAAATGGAGCCAAAAGATCGCGGGATTGCGATGGTGTTCCAGAACTACGCGCTTTATCCGCATATGAGTGTCGAAGAAAACATGGCGTGGGGGCTGAAAATTCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTGCGCGTGCAGATGCGTCTTGAACTGCAACAGTTGCACCGTCGCCTGAAAACGACTTCACTCTACGTTACTCACGATCAGGTTGAAGCGATGACGCTCGCCCAGCGAGTAATGGTGATGAACGGCGGTGTTGCCGAACAGATTGGCACACCAGTTGAAGTCTACGAAAAGCCCGCCAGCCTGTTTGTAGCGAGTTTTATCGGCAGTCCGGCGATGAACCTGCTGACAGGCCGCGTGAATAACGAAGGCACGCATTTCGAACTGGACGGCGGTATTGAGCTGCCGCTAAACGGTGGCTACCGTCAGTATGCCGGGCGTAAAATGACTCTCGGCATTCGCCCGGAACATATTGCGCTAAGCTCGCAGGCAGAAGGCGGCGTACCGATGGTGATGGACACGCTGGAGATCCTCGGCGCAGATAACCTGGCGCACGGACGCTGGGGCGAGCAGAAGCTGGTGGTGCGACTGGCGCATCAGGAGCGCCCGACGGCAGGCAGCACGCTGTGGCTGCATCTGGCGGAAAATCAGCTGCATCTTTTTGATGGTGAAACAGGACAACGAGTATGA", + "dna_sequence_length": 1071, + "functions": [ + "sn-glycerol-3-phosphate ABC transporter ATPase" + ], + "id": "CDS_3386", + "location": [ + [ + "NC_000913", + 3589180, + "-", + 1071 + ] + ], + "md5": "0eff025bd5d427312d38a5cf1988c982", + "parent_gene": "", + "protein_md5": "c6e38e40dae5d159123b4a50d9ee7e15", + "protein_translation": "MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGRKMTLGIRPEHIALSSQAEGGVPMVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFDGETGQRV", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011270" + ], + [ + "gene_synonym", + "ECK3435" + ], + [ + "gene_synonym", + "EcoGene:EG11049" + ], + [ + "gene_synonym", + "GI:16131323" + ], + [ + "gene_synonym", + "GeneID:947959" + ], + [ + "gene_synonym", + "JW3416" + ], + [ + "gene_synonym", + "NP_417908.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10906" + ], + [ + "gene_synonym", + "b3451" + ], + [ + "gene_synonym", + "ugpE" + ] + ], + "dna_sequence": "ATGATTGAGAACCGTCCGTGGCTGACGATATTCAGCCATACCATGCTGATCCTCGGGATCGCGGTGATCCTCTTCCCGCTGTACGTGGCGTTTGTCGCGGCGACGCTGGATAAACAGGCCGTCTATGCCGCGCCGATGACGCTCATCCCCGGCACACATCTGCTGGAAAACATCCACAACATCTGGGTGAACGGGGTAGGCACGAATAGCGCGCCGTTCTGGCGGATGTTGCTTAACAGCTTTGTGATGGCGTTCAGCATTACGCTCGGCAAAATTACCGTCTCGATGCTCTCGGCATTTGCCATTGTCTGGTTTCGTTTTCCGCTACGTAACCTCTTCTTCTGGATGATTTTTATCACCCTGATGCTGCCGGTTGAAGTACGTATCTTCCCGACGGTGGAAGTCATCGCCAACCTGCAGATGCTCGACAGCTACGCCGGTTTAACGCTGCCGCTGATGGCCTCGGCGACCGCTACTTTCCTGTTCCGCCAGTTCTTTATGACGCTGCCGGATGAGCTGGTGGAAGCCGCGCGGATCGACGGCGCATCGCCAATGCGCTTCTTTTGCGACATCGTTTTTCCGCTCTCCAAAACTAATCTGGCGGCGCTGTTTGTGATCACCTTTATCTACGGCTGGAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGATTGTTTTAGTGATGCAGCGTGCCTTCGTGCGCGGCCTGGTCGATAGTGAGAAATAA", + "dna_sequence_length": 846, + "functions": [ + "sn-glycerol-3-phosphate ABC transporter permease" + ], + "id": "CDS_3387", + "location": [ + [ + "NC_000913", + 3590027, + "-", + 846 + ] + ], + "md5": "7ffd9c2283553a0b97bbdc2d7f9114fe", + "parent_gene": "", + "protein_md5": "62251455de77a373c872739252af0cd6", + "protein_translation": "MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAAPMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMVAMLLTLIPPVVIVLVMQRAFVRGLVDSEK", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011272" + ], + [ + "gene_synonym", + "ECK3436" + ], + [ + "gene_synonym", + "EcoGene:EG11046" + ], + [ + "gene_synonym", + "GI:16131324" + ], + [ + "gene_synonym", + "GeneID:947957" + ], + [ + "gene_synonym", + "JW3417" + ], + [ + "gene_synonym", + "NP_417909.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10905" + ], + [ + "gene_synonym", + "b3452" + ], + [ + "gene_synonym", + "psiB" + ], + [ + "gene_synonym", + "psiC" + ], + [ + "gene_synonym", + "ugpA" + ] + ], + "dna_sequence": "ATGTCATCATCCCGTCCGGTGTTCCGCTCGCGCTGGCTGCCTTATCTGCTGGTCGCGCCGCAGCTCATCATCACCGTTATCTTTTTTATCTGGCCTGCGGGCGAAGCGTTGTGGTACTCGCTACAAAGCGTCGATCCGTTTGGTTTCTCCAGCCAGTTTGTCGGCCTGGATAACTTCGTCACGCTGTTCCATGACAGCTACTATCTCGACTCCTTCTGGACGACGATAAAATTCAGCACCTTTGTCACCGTCAGCGGTTTGCTGGTATCGCTGTTCTTTGCGGCGCTGGTGGAGTACATCGTGCGCGGCAGCCGTTTCTATCAAACCTTAATGTTGCTGCCTTACGCCGTGGCTCCCGCCGTTGCCGCCGTATTGTGGATCTTCCTGTTTAACCCCGGTCGCGGGCTGATCACCCATTTTCTCGCGGAGTTCGGCTACGACTGGAACCACGCGCAAAACAGCGGTCAGGCAATGTTTCTGGTGGTGTTTGCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGTTGATCGAAGCCGCAGCCATCGACGGTGCAGGGCCGATTCGCCGCTTCTTTAAGATTGCGCTGCCGCTTATCGCCCCGGTGAGTTTCTTCCTGCTGGTAGTGAACCTGGTGTATGCCTTCTTCGACACCTTCCCGGTGATCGACGCCGCCACGTCCGGCGGGCCGGTTCAGGCCACCACGACGCTGATTTATAAGATCTACCGCGAAGGTTTTACCGGACTGGATCTGGCTTCGTCTGCCGCACAGTCGGTGGTGTTGATGTTCCTCGTCATCGTGCTGACGGTGGTGCAGTTCCGCTATGTTGAAAGCAAGGTGCGTTACCAATGA", + "dna_sequence_length": 888, + "functions": [ + "sn-glycerol-3-phosphate ABC transporter permease" + ], + "id": "CDS_3388", + "location": [ + [ + "NC_000913", + 3590911, + "-", + 888 + ] + ], + "md5": "593e6b6dfdd4de4583a849ddfe2dee01", + "parent_gene": "", + "protein_md5": "ae4852e74e0ff9f9e525468243dc365b", + "protein_translation": "MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011274" + ], + [ + "gene_synonym", + "ECK3437" + ], + [ + "gene_synonym", + "EcoGene:EG11047" + ], + [ + "gene_synonym", + "GI:16131325" + ], + [ + "gene_synonym", + "GeneID:947962" + ], + [ + "gene_synonym", + "JW3418" + ], + [ + "gene_synonym", + "NP_417910.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG80" + ], + [ + "gene_synonym", + "b3453" + ], + [ + "gene_synonym", + "psiB" + ], + [ + "gene_synonym", + "psiC" + ], + [ + "gene_synonym", + "ugpB" + ] + ], + "dna_sequence": "ATGAAACCGTTACATTATACAGCTTCAGCACTGGCGCTCGGACTGGCGTTAATGGGGAATGCACAGGCAGTGACGACCATTCCGTTCTGGCATTCTATGGAAGGGGAACTGGGTAAAGAGGTGGATTCTCTGGCCCAACGTTTTAACGCCGAAAACCCGGATTACAAAATTGTACCGACCTATAAAGGCAACTACGAACAGAATTTAAGCGCGGGGATTGCCGCATTTCGTACCGGCAACGCGCCGGCTATTTTGCAGGTTTATGAAGTTGGCACCGCCACCATGATGGCGTCGAAAGCCATTAAACCGGTGTATGACGTGTTTAAAGAGGCAGGGATTCAGTTCGATGAGTCGCAGTTTGTGCCGACGGTTTCAGGTTACTACTCCGACAGCAAAACGGGCCACTTACTCTCCCAGCCATTCAACAGCTCGACCCCCGTTCTCTATTACAACAAAGACGCCTTCAAGAAAGCAGGATTAGACCCGGAACAGCCGCCGAAAACCTGGCAGGATCTGGCGGACTATGCCGCGAAACTGAAAGCCTCCGGCATGAAGTGCGGCTACGCCAGCGGCTGGCAGGGCTGGATCCAACTGGAAAACTTTAGCGCCTGGAACGGTCTGCCGTTTGCCAGCAAAAACAACGGCTTTGACGGCACGGACGCGGTGCTGGAGTTCAATAAGCCGGAGCAGGTGAAACACATCGCCATGCTCGAGGAGATGAACAAGAAGGGCGACTTCAGCTACGTCGGTCGTAAGGATGAATCCACCGAGAAGTTCTATAACGGTGATTGCGCGATGACCACCGCCTCTTCCGGTTCTCTTGCCAACATTCGCGAGTACGCCAAATTTAACTACGGCGTAGGCATGATGCCTTACGACGCCGATGCGAAAGATGCGCCACAAAACGCCATTATCGGCGGAGCCAGCCTGTGGGTGATGCAGGGTAAAGATAAAGAAACGTATACCGGTGTGGCGAAGTTCCTCGATTTCCTCGCGAAGCCAGAAAACGCTGCCGAGTGGCATCAGAAAACCGGTTATCTGCCAATCACCAAAGCAGCGTATGACCTGACCCGTGAGCAGGGCTTTTATGAGAAAAACCCAGGGGCGGATACCGCGACGCGTCAGATGCTGAATAAGCCGCCGTTGCCGTTCACCAAAGGGCTGCGTCTGGGCAACATGCCGCAGATCCGCGTGATTGTGGATGAAGAGCTGGAGAGCGTGTGGACCGGTAAGAAGACACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAA", + "dna_sequence_length": 1317, + "functions": [ + "sn-glycerol-3-phosphate ABC transporter periplasmic binding protein" + ], + "id": "CDS_3389", + "location": [ + [ + "NC_000913", + 3592325, + "-", + 1317 + ] + ], + "md5": "fda312b5ed7e1c0761e0c32f4727ab27", + "parent_gene": "", + "protein_md5": "c5814737bb4fe183c9ad6a7ea8e039b1", + "protein_translation": "MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS", + "protein_translation_length": 438, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011282" + ], + [ + "gene_synonym", + "ECK3438" + ], + [ + "gene_synonym", + "EcoGene:EG10536" + ], + [ + "gene_synonym", + "GI:90111594" + ], + [ + "gene_synonym", + "GeneID:947961" + ], + [ + "gene_synonym", + "JW3419" + ], + [ + "gene_synonym", + "NP_417911.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22731" + ], + [ + "gene_synonym", + "b3454" + ], + [ + "gene_synonym", + "livF" + ] + ], + "dna_sequence": "ATGGAAAAAGTCATGTTGTCCTTTGACAAAGTCAGCGCCCACTACGGCAAAATCCAGGCGCTGCATGAGGTGAGCCTGCATATCAATCAGGGCGAGATTGTCACGCTGATTGGCGCGAACGGGGCGGGGAAAACCACCTTGCTCGGCACGTTATGCGGCGATCCGCGTGCCACCAGCGGGCGAATTGTGTTTGATGATAAAGACATTACCGACTGGCAGACAGCGAAAATCATGCGCGAAGCGGTGGCGATTGTCCCGGAAGGGCGTCGCGTCTTCTCGCGGATGACGGTGGAAGAGAACCTGGCGATGGGCGGTTTTTTTGCTGAACGCGACCAGTTCCAGGAGCGCATAAAGTGGGTGTATGAGCTGTTTCCACGTCTGCATGAGCGCCGTATTCAGCGGGCGGGCACCATGTCCGGCGGTGAACAGCAGATGCTGGCGATTGGTCGTGCGCTGATGAGCAACCCGCGTTTGCTACTGCTTGATGAGCCATCGCTCGGTCTTGCGCCGATTATCATCCAGCAAATTTTCGACACCATCGAGCAGCTGCGCGAGCAGGGGATGACTATCTTTCTCGTCGAGCAGAACGCCAACCAGGCGCTAAAGCTGGCGGATCGCGGCTACGTGCTGGAAAACGGCCATGTAGTGCTTTCCGATACTGGTGATGCGCTGCTGGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAA", + "dna_sequence_length": 714, + "functions": [ + "branched-chain amino acid ABC transporter ATPase" + ], + "id": "CDS_3390", + "location": [ + [ + "NC_000913", + 3593437, + "-", + 714 + ] + ], + "md5": "e534b9573947b33efa51c60b5385ff6d", + "parent_gene": "", + "protein_md5": "a75bb78a32959f18e323d79b169ab321", + "protein_translation": "MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011284" + ], + [ + "gene_synonym", + "ECK3439" + ], + [ + "gene_synonym", + "EcoGene:EG10537" + ], + [ + "gene_synonym", + "GI:16131327" + ], + [ + "gene_synonym", + "GeneID:947967" + ], + [ + "gene_synonym", + "JW3420" + ], + [ + "gene_synonym", + "NP_417912.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S7" + ], + [ + "gene_synonym", + "b3455" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + "hrbC" + ], + [ + "gene_synonym", + "hrbD" + ], + [ + "gene_synonym", + "livG" + ] + ], + "dna_sequence": "ATGAGTCAGCCATTATTATCTGTTAACGGCCTGATGATGCGCTTCGGCGGCCTGCTGGCGGTGAACAACGTCAATCTTGAACTGTACCCGCAGGAGATCGTCTCGTTAATCGGCCCTAACGGTGCCGGAAAAACCACGGTTTTTAACTGTCTGACCGGATTCTACAAACCCACCGGCGGCACCATTTTACTGCGCGATCAGCACCTGGAAGGTTTACCGGGGCAGCAAATTGCCCGCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGGTGGCGCAGCATCAGCAACTGAAAACCGGGCTGTTCTCTGGCCTGTTGAAAACGCCATCCTTCCGTCGCGCCCAGAGCGAAGCGCTCGACCGCGCCGCGACCTGGCTTGAGCGCATTGGTTTGCTGGAACACGCCAACCGTCAGGCGAGTAACCTGGCCTATGGTGACCAGCGCCGTCTTGAGATTGCCCGCTGCATGGTGACGCAGCCGGAGATTTTAATGCTCGACGAACCTGCGGCAGGTCTTAACCCGAAAGAGACGAAAGAGCTGGATGAGCTGATTGCCGAACTGCGCAATCATCACAACACCACTATCTTGTTGATTGAACACGATATGAAGCTGGTGATGGGAATTTCGGACCGAATTTACGTGGTCAATCAGGGGACGCCGCTGGCAAACGGTACGCCGGAGCAGATCCGTAATAACCCGGACGTGATCCGTGCCTATTTAGGTGAGGCATAA", + "dna_sequence_length": 768, + "functions": [ + "branched-chain amino acid ABC transporter ATPase" + ], + "id": "CDS_3391", + "location": [ + [ + "NC_000913", + 3594206, + "-", + 768 + ] + ], + "md5": "1adcaeec36cb140178f2da84e2b49360", + "parent_gene": "", + "protein_md5": "5ae0816c961f60a72196781e72d7205e", + "protein_translation": "MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011287" + ], + [ + "gene_synonym", + "ECK3440" + ], + [ + "gene_synonym", + "EcoGene:EG10541" + ], + [ + "gene_synonym", + "GI:16131328" + ], + [ + "gene_synonym", + "GeneID:947966" + ], + [ + "gene_synonym", + "JW3421" + ], + [ + "gene_synonym", + "NP_417913.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22729" + ], + [ + "gene_synonym", + "b3456" + ], + [ + "gene_synonym", + "livM" + ] + ], + "dna_sequence": "ATGAAACCGATGCATATTGCAATGGCGCTGCTCTCTGCCGCGATGTTCTTTGTGCTGGCGGGCGTCTTTATGGGCGTGCAACTGGAGCTGGATGGCACCAAACTGGTGGTCGACACGGCTTCGGATGTCCGTTGGCAGTGGGTGTTTATCGGCACGGCGGTGGTCTTTTTCTTCCAGCTTTTGCGACCGGCTTTCCAGAAAGGGTTGAAAAGCGTTTCCGGACCGAAGTTTATTCTGCCCGCCATTGATGGCTCCACGGTGAAGCAGAAACTGTTCCTCGTGGCGCTGTTGGTGCTTGCGGTGGCGTGGCCGTTTATGGTTTCACGCGGGACGGTGGATATTGCCACCCTGACCATGATCTACATTATCCTCGGTCTCGGGCTGAACGTGGTTGTTGGTCTTTCTGGTCTGCTGGTGCTGGGGTACGGCGGTTTTTACGCCATCGGCGCTTACACTTTTGCGCTGCTCAATCACTATTACGGCTTGGGCTTCTGGACCTGCCTGCCGATTGCTGGATTAATGGCAGCGGCGGCGGGCTTCCTGCTCGGTTTTCCGGTGCTGCGTTTGCGCGGTGACTATCTGGCGATCGTTACCCTCGGTTTCGGCGAAATTGTGCGCATATTGCTGCTCAATAACACCGAAATTACCGGCGGCCCGAACGGAATCAGTCAGATCCCGAAACCGACACTCTTCGGACTCGAGTTCAGCCGTACCGCTCGTGAAGGCGGCTGGGACACGTTCAGTAATTTCTTTGGCCTGAAATACGATCCCTCCGATCGTGTCATCTTCCTCTACCTGGTGGCGTTGCTGCTGGTGGTGCTAAGCCTGTTTGTCATTAACCGCCTGCTGCGGATGCCGCTGGGGCGTGCGTGGGAAGCGTTGCGTGAAGATGAAATCGCCTGCCGTTCGCTGGGCTTAAGCCCGCGTCGTATCAAGCTGACTGCCTTTACCATAAGTGCCGCGTTTGCCGGTTTTGCCGGAACGCTGTTTGCGGCGCGTCAGGGCTTTGTCAGCCCGGAATCCTTCACCTTTGCCGAATCGGCGTTTGTGCTGGCGATAGTGGTGCTCGGCGGTATGGGCTCGCAATTTGCGGTGATTCTGGCGGCAATTTTGCTGGTGGTGTCGCGCGAGTTGATGCGTGATTTCAACGAATACAGCATGTTAATGCTCGGTGGTTTGATGGTGCTGATGATGATCTGGCGTCCGCAGGGCTTGCTGCCCATGACGCGCCCGCAACTGAAGCTGAAAAACGGCGCAGCGAAAGGAGAGCAGGCATGA", + "dna_sequence_length": 1278, + "functions": [ + "branched-chain amino acid ABC transporter permease" + ], + "id": "CDS_3392", + "location": [ + [ + "NC_000913", + 3595480, + "-", + 1278 + ] + ], + "md5": "024844d11c27d19f4d7d33eda2fc9128", + "parent_gene": "", + "protein_md5": "7d13e3f23851d016af581d6dfed098b4", + "protein_translation": "MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDVRWQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011290" + ], + [ + "gene_synonym", + "ECK3441" + ], + [ + "gene_synonym", + "EcoGene:EG10538" + ], + [ + "gene_synonym", + "GI:16131329" + ], + [ + "gene_synonym", + "GeneID:947965" + ], + [ + "gene_synonym", + "JW3422" + ], + [ + "gene_synonym", + "NP_417914.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX7" + ], + [ + "gene_synonym", + "b3457" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + "hrbC" + ], + [ + "gene_synonym", + "hrbD" + ], + [ + "gene_synonym", + "livH" + ] + ], + "dna_sequence": "ATGTCTGAGCAGTTTTTGTATTTCTTGCAGCAGATGTTTAACGGCGTCACGCTGGGCAGTACCTACGCGCTGATAGCCATCGGCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCGCCCGGTGCGTAACTCTAAGCGCCTGATTGCACTCATCTCTGCAATCGGTATGTCCATCTTCCTGCAAAACTACGTCAGCCTGACCGAAGGTTCGCGCGACGTGGCGCTGCCGAGCCTGTTTAACGGTCAGTGGGTGGTGGGGCATAGCGAAAACTTCTCTGCCTCTATTACCACCATGCAGGCGGTGATCTGGATTGTTACCTTCCTCGCCATGCTGGCGCTGACGATTTTCATTCGCTATTCCCGCATGGGTCGCGCGTGTCGTGCCTGCGCGGAAGATCTGAAAATGGCGAGTCTGCTTGGCATTAACACCGACCGGGTGATTGCGCTGACCTTTGTGATTGGCGCGGCGATGGCGGCGGTGGCGGGTGTGCTGCTCGGTCAGTTCTACGGCGTCATTAACCCCTACATCGGCTTTATGGCCGGGATGAAAGCCTTTACCGCGGCGGTGCTCGGTGGGATTGGCAGCATTCCGGGAGCGATGATTGGCGGCCTGATTCTGGGGATTGCGGAGGCGCTCTCTTCTGCCTATCTGAGTACGGAATATAAAGATGTGGTCTCATTCGCCCTGCTGATTCTGGTGCTGCTGGTGATGCCGACCGGTATTCTGGGTCGCCCGGAGGTAGAGAAAGTATGA", + "dna_sequence_length": 927, + "functions": [ + "branched-chain amino acid ABC transporter permease" + ], + "id": "CDS_3393", + "location": [ + [ + "NC_000913", + 3596403, + "-", + 927 + ] + ], + "md5": "810adac079d457a5883b3ff53e7f40b6", + "parent_gene": "", + "protein_md5": "f3b3126d27a413d02b5c6fee54c114c0", + "protein_translation": "MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011292" + ], + [ + "gene_synonym", + "ECK3442" + ], + [ + "gene_synonym", + "EcoGene:EG10540" + ], + [ + "gene_synonym", + "GI:16131330" + ], + [ + "gene_synonym", + "GeneID:947964" + ], + [ + "gene_synonym", + "JW3423" + ], + [ + "gene_synonym", + "NP_417915.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04816" + ], + [ + "gene_synonym", + "b3458" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + "hrbC" + ], + [ + "gene_synonym", + "hrbD" + ], + [ + "gene_synonym", + "livK" + ] + ], + "dna_sequence": "ATGAAACGGAATGCGAAAACTATCATCGCAGGGATGATTGCACTGGCAATTTCACACACCGCTATGGCTGACGATATTAAAGTCGCCGTTGTCGGCGCGATGTCCGGCCCGATTGCCCAGTGGGGCGATATGGAATTTAACGGCGCGCGTCAGGCAATTAAAGACATTAATGCCAAAGGGGGAATTAAGGGCGATAAACTGGTTGGCGTGGAATATGACGACGCATGCGACCCGAAACAAGCCGTTGCGGTCGCCAACAAAATCGTTAATGACGGCATTAAATACGTTATTGGTCATCTGTGTTCTTCTTCTACCCAGCCTGCGTCAGATATCTATGAAGACGAAGGTATTCTGATGATCTCGCCGGGAGCGACCAACCCGGAGCTGACCCAACGCGGTTATCAACACATTATGCGTACTGCCGGGCTGGACTCTTCCCAGGGGCCAACGGCGGCAAAATACATTCTTGAGACGGTGAAGCCCCAGCGCATCGCCATCATTCACGACAAACAACAGTATGGCGAAGGGCTGGCGCGTTCGGTGCAGGACGGGCTGAAAGCGGCTAACGCCAACGTCGTCTTCTTCGACGGTATTACCGCCGGGGAGAAAGATTTCTCCGCGCTGATCGCCCGCCTGAAAAAAGAAAACATCGACTTCGTTTACTACGGCGGTTACTACCCGGAAATGGGGCAGATGCTGCGCCAGGCCCGTTCCGTTGGCCTGAAAACCCAGTTTATGGGGCCGGAAGGTGTGGGTAATGCGTCGTTGTCGAACATTGCCGGTGATGCCGCCGAAGGCATGTTGGTCACTATGCCAAAACGCTATGACCAGGATCCGGCAAACCAGGGCATCGTTGATGCGCTGAAAGCAGACAAGAAAGATCCGTCCGGGCCTTATGTCTGGATCACCTACGCGGCGGTGCAATCTCTGGCGACTGCCCTTGAGCGTACCGGCAGCGATGAGCCGCTGGCGCTGGTGAAAGATTTAAAAGCTAACGGTGCAAACACCGTGATTGGGCCGCTGAACTGGGATGAAAAAGGCGATCTTAAGGGATTTGATTTTGGTGTCTTCCAGTGGCACGCCGACGGTTCATCCACGGCAGCCAAGTGA", + "dna_sequence_length": 1110, + "functions": [ + "leucine transporter subunit" + ], + "id": "CDS_3394", + "location": [ + [ + "NC_000913", + 3597560, + "-", + 1110 + ] + ], + "md5": "20c7ae2e15a3f3632795dfa629f5e6d9", + "parent_gene": "", + "protein_md5": "282fe335fbf6ed4a93ac54316d4aedd5", + "protein_translation": "MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK", + "protein_translation_length": 369, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011296" + ], + [ + "gene_synonym", + "ECK3443" + ], + [ + "gene_synonym", + "EcoGene:EG12211" + ], + [ + "gene_synonym", + "GI:16131331" + ], + [ + "gene_synonym", + "GeneID:947963" + ], + [ + "gene_synonym", + "JW3424" + ], + [ + "gene_synonym", + "NP_417916.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37613" + ], + [ + "gene_synonym", + "b3459" + ], + [ + "gene_synonym", + "livL" + ], + [ + "gene_synonym", + "panM" + ], + [ + "gene_synonym", + "panZ" + ], + [ + "gene_synonym", + "yhhK" + ] + ], + "dna_sequence": "ATGAAGCTGACCATCATTCGATTAGAAAAATTTAGCGACCAAGACCGGATTGACCTGCAAAAGATCTGGCCGGAGTATTCCCCTTCCTCGTTACAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGAGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATCCTGGCGTTTCATGCTGGTGGATGGCGGATGCAGGCGTGGAAGATCGCGGTGTGATGACGGCGTTTATGCAGGCGCTGGGGTTTACGGCACAACAGGGCGGCTGGGAGAAGTGTTAA", + "dna_sequence_length": 384, + "functions": [ + "PanD autocleavage accelerator, panothenate synthesis" + ], + "id": "CDS_3395", + "location": [ + [ + "NC_000913", + 3597984, + "+", + 384 + ] + ], + "md5": "57c6611f3b186cc61c60e92e2fe19c60", + "parent_gene": "", + "protein_md5": "c6182ce9fafa6ca12a98731074ee9a10", + "protein_translation": "MKLTIIRLEKFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQQGGWEKC", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011299" + ], + [ + "gene_synonym", + "ECK3444" + ], + [ + "gene_synonym", + "EcoGene:EG10539" + ], + [ + "gene_synonym", + "GI:49176358" + ], + [ + "gene_synonym", + "GeneID:947971" + ], + [ + "gene_synonym", + "JW3425" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD96" + ], + [ + "gene_synonym", + "YP_026223.1" + ], + [ + "gene_synonym", + "b3460" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + "hrbC" + ], + [ + "gene_synonym", + "hrbD" + ], + [ + "gene_synonym", + "livJ" + ] + ], + "dna_sequence": "ATGAACATAAAGGGTAAAGCGTTACTGGCAGGATGTATCGCGCTGGCATTCAGCAATATGGCTCTGGCAGAAGATATTAAAGTCGCGGTCGTGGGCGCAATGTCCGGTCCGGTTGCGCAGTACGGTGACCAGGAGTTTACCGGCGCAGAGCAGGCGGTTGCGGATATCAACGCTAAAGGCGGCATTAAAGGCAACAAACTGCAAATCGTAAAATATGACGATGCCTGTGACCCGAAACAGGCGGTTGCGGTGGCGAACAAAGTCGTTAACGACGGCATTAAATATGTGATTGGTCACCTCTGTTCTTCATCAACGCAGCCTGCGTCTGACATCTACGAAGACGAAGGCATTTTAATGATCACCCCAGCGGCAACCGCGCCGGAGCTGACCGCCCGTGGCTATCAGCTGATCCTGCGCACCACCGGCCTGGACTCCGACCAGGGGCCGACGGCGGCGAAATATATTCTTGAGAAAGTGAAACCGCAGCGTATTGCTATCGTTCACGACAAACAGCAATACGGCGAAGGTCTGGCGCGAGCGGTGCAGGACGGCCTGAAGAAAGGCAATGCAAACGTGGTGTTCTTTGATGGCATCACCGCCGGGGAAAAAGATTTCTCAACGCTGGTGGCGCGTCTGAAAAAAGAGAATATCGACTTCGTTTACTACGGCGGTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCAGTTTATGGGGCCGGAAGGTGTGGCTAACGTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAACTACGATCAGGTTCCGGCGAACAAACCCATTGTTGACGCGATCAAAGCGAAAAAACAGGACCCAAGTGGCGCATTCGTTTGGACCACCTACGCCGCGCTGCAATCTTTGCAGGCGGGCCTGAATCAGTCTGACGATCCGGCTGAAATCGCCAAATACCTGAAAGCGAACTCCGTGGATACCGTAATGGGACCGCTGACCTGGGATGAGAAAGGCGATCTGAAAGGCTTTGAGTTCGGCGTATTTGACTGGCACGCCAACGGCACGGCGACCGATGCGAAGTAA", + "dna_sequence_length": 1104, + "functions": [ + "branched-chain amino acid ABC transporter periplasmic binding protein" + ], + "id": "CDS_3396", + "location": [ + [ + "NC_000913", + 3599658, + "-", + 1104 + ] + ], + "md5": "5d09ebfe7353c3343285c6030bbc9d13", + "parent_gene": "", + "protein_md5": "b99a60772bf9223a6f0ecb9591b86c36", + "protein_translation": "MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011303" + ], + [ + "gene_synonym", + "ECK3445" + ], + [ + "gene_synonym", + "EcoGene:EG10897" + ], + [ + "gene_synonym", + "GI:16131333" + ], + [ + "gene_synonym", + "GeneID:947970" + ], + [ + "gene_synonym", + "JW3426" + ], + [ + "gene_synonym", + "NP_417918.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGB3" + ], + [ + "gene_synonym", + "b3461" + ], + [ + "gene_synonym", + "fam" + ], + [ + "gene_synonym", + "hin" + ], + [ + "gene_synonym", + "htpR" + ], + [ + "gene_synonym", + "rpoH" + ] + ], + "dna_sequence": "ATGACTGACAAAATGCAAAGTTTAGCTTTAGCCCCAGTTGGCAACCTGGATTCCTACATCCGGGCAGCTAACGCGTGGCCGATGTTGTCGGCTGACGAGGAGCGGGCGCTGGCTGAAAAGCTGCATTACCATGGCGATCTGGAAGCAGCTAAAACGCTGATCCTGTCTCACCTGCGGTTTGTTGTTCATATTGCTCGTAATTATGCGGGCTATGGCCTGCCACAGGCGGATTTGATTCAGGAAGGTAACATCGGCCTGATGAAAGCAGTGCGCCGTTTCAACCCGGAAGTGGGTGTGCGCCTGGTCTCCTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGTCAAAGTTGCGACCACCAAAGCGCAGCGCAAACTGTTCTTCAACCTGCGTAAAACCAAGCAGCGTCTGGGCTGGTTTAACCAGGATGAAGTCGAAATGGTGGCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGCACAGGACATGACCTTTGACCTGTCTTCCGACGACGATTCCGACAGCCAGCCGATGGCTCCGGTGCTCTATCTGCAGGATAAATCATCTAACTTTGCCGACGGCATTGAAGATGATAACTGGGAAGAGCAGGCGGCAAACCGTCTGACCGACGCGATGCAGGGTCTGGACGAACGCAGCCAGGACATCATCCGTGCGCGCTGGCTGGACGAAGACAACAAGTCCACGTTGCAGGAACTGGCTGACCGTTACGGCGTTTCCGCTGAGCGTGTACGCCAGCTGGAAAAGAACGCGATGAAAAAATTGCGTGCTGCCATTGAAGCGTAA", + "dna_sequence_length": 855, + "functions": [ + "RNA polymerase, sigma 32 (sigma H) factor" + ], + "id": "CDS_3397", + "location": [ + [ + "NC_000913", + 3600783, + "-", + 855 + ] + ], + "md5": "f9e2da343c7b895ace8f5cd90c54df37", + "parent_gene": "", + "protein_md5": "80fc84758c6f971322646c5516b8915f", + "protein_translation": "MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011311" + ], + [ + "gene_synonym", + "ECK3446" + ], + [ + "gene_synonym", + "EcoGene:EG10345" + ], + [ + "gene_synonym", + "GI:16131334" + ], + [ + "gene_synonym", + "GeneID:947969" + ], + [ + "gene_synonym", + "JW3427" + ], + [ + "gene_synonym", + "NP_417919.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC30" + ], + [ + "gene_synonym", + "b3462" + ], + [ + "gene_synonym", + "ftsS" + ], + [ + "gene_synonym", + "ftsX" + ] + ], + "dna_sequence": "ATGAATAAGCGCGATGCAATCAATCATATTCGGCAGTTTGGCGGGCGTCTTGATCGCTTCCGTAAATCGGTCGGCGGCTCAGGCGACGGCGGTCGTAACGCACCAAAACGCGCGAAATCCTCGCCAAAACCGGTAAATCGCAAAACCAACGTTTTCAACGAACAGGTGCGCTATGCCTTCCACGGCGCATTGCAGGATCTGAAAAGCAAACCGTTCGCCACGTTTTTAACGGTGATGGTTATCGCCATTTCTCTGACGCTGCCCAGCGTCTGTTATATGGTGTACAAAAACGTTAACCAGGCGGCGACGCAGTATTATCCGTCACCGCAAATCACTGTTTATCTGCAAAAAACGCTGGACGATGACGCTGCTGCGGGCGTGGTGGCACAGTTGCAGGCCGAGCAAGGCGTGGAGAAAGTGAACTATCTTTCTCGTGAAGACGCACTGGGTGAGTTCCGTAACTGGTCTGGTTTTGGTGGTGCGCTGGATATGCTGGAAGAAAACCCGCTTCCGGCAGTGGCGGTGGTGATCCCGAAACTCGATTTCCAGGGGACGGAATCACTGAATACGCTGCGTGATCGTATCACGCAGATTAACGGCATTGACGAAGTGCGGATGGATGACAGCTGGTTTGCCCGTCTGGCGGCGTTGACCGGGCTGGTCGGGCGCGTTTCGGCGATGATCGGCGTGTTGATGGTGGCGGCCGTGTTCCTCGTCATCGGTAACAGTGTGCGTCTGAGTATCTTTGCTCGCCGTGACTCCATTAACGTACAGAAACTGATTGGTGCGACAGATGGATTCATCCTGCGCCCGTTCCTGTATGGTGGCGCACTGCTGGGATTTTCTGGCGCATTGTTGTCATTAATTTTGTCAGAAATTCTGGTGCTGCGATTGTCATCGGCGGTTGCGGAAGTGGCACAGGTTTTCGGAACGAAGTTTGATATCAATGGCTTATCATTCGATGAATGCCTGCTATTGCTGCTGGTATGCTCGATGATTGGCTGGGTGGCAGCGTGGCTTGCCACGGTACAACATTTACGCCACTTTACGCCTGAATAA", + "dna_sequence_length": 1059, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_3398", + "location": [ + [ + "NC_000913", + 3602086, + "-", + 1059 + ] + ], + "md5": "f58a0a4d132571aae9273d2f091a6998", + "parent_gene": "", + "protein_md5": "3ed844d1b49fbe63afcfc819444fda72", + "protein_translation": "MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKPVNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAATQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGGALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPE", + "protein_translation_length": 352, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011313" + ], + [ + "gene_synonym", + "ECK3447" + ], + [ + "gene_synonym", + "EcoGene:EG10340" + ], + [ + "gene_synonym", + "GI:16131335" + ], + [ + "gene_synonym", + "GeneID:947968" + ], + [ + "gene_synonym", + "JW3428" + ], + [ + "gene_synonym", + "NP_417920.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9R7" + ], + [ + "gene_synonym", + "b3463" + ], + [ + "gene_synonym", + "ftsE" + ] + ], + "dna_sequence": "ATGATTCGCTTTGAACATGTCAGCAAGGCTTATCTCGGTGGGAGACAGGCGCTGCAGGGCGTTACGTTCCATATGCAGCCGGGTGAGATGGCGTTTCTGACCGGTCATTCCGGCGCAGGGAAAAGTACCCTCCTGAAGCTGATCTGTGGGATTGAGCGGCCCAGCGCCGGGAAAATCTGGTTTAGCGGCCATGACATCACGCGTCTGAAAAACCGTGAAGTTCCGTTTCTGCGCCGCCAGATTGGCATGATTTTCCAGGATCACCATCTACTGATGGACCGTACTGTCTACGATAACGTGGCGATCCCGCTGATTATCGCCGGTGCCAGCGGTGACGATATTCGTCGCCGGGTGTCGGCGGCGCTGGATAAAGTCGGGCTACTGGACAAAGCGAAGAACTTCCCTATTCAGCTTTCGGGCGGTGAACAACAGCGTGTTGGCATTGCCCGCGCGGTGGTGAACAAGCCCGCGGTACTGCTGGCGGACGAACCGACTGGTAACCTGGACGACGCGCTGTCGGAAGGCATTTTACGTCTGTTTGAAGAGTTTAACCGCGTTGGGGTAACCGTATTGATGGCAACGCACGACATCAACCTGATCTCGCGGCGTTCCTATCGCATGCTCACCCTGAGCGATGGTCACTTGCATGGAGGCGTGGGCCATGAATAA", + "dna_sequence_length": 669, + "functions": [ + "cell division ATP-binding protein" + ], + "id": "CDS_3399", + "location": [ + [ + "NC_000913", + 3602747, + "-", + 669 + ] + ], + "md5": "f30b90a7dfc10676884a11c1b46c6c82", + "parent_gene": "", + "protein_md5": "37921dab3e2edc0b45927b528e3c125e", + "protein_translation": "MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGGVGHE", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011318" + ], + [ + "gene_synonym", + "ECK3448" + ], + [ + "gene_synonym", + "EcoGene:EG10346" + ], + [ + "gene_synonym", + "GI:16131336" + ], + [ + "gene_synonym", + "GeneID:947978" + ], + [ + "gene_synonym", + "JW3429" + ], + [ + "gene_synonym", + "NP_417921.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10121" + ], + [ + "gene_synonym", + "b3464" + ], + [ + "gene_synonym", + "ftsY" + ] + ], + "dna_sequence": "ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGGCTTTGGTCAAAAAGAGCAGACCCCGGAAAAAGAGACAGAAGTTCAGAATGAACAACCGGTTGTAGAAGAAATCGTTCAGGCGCAAGAGCCTGTGAAGGCCTCTGAACAAGCCGTTGAAGAGCAGCCGCAAGCGCATACTGAAGCCGAGGCGGAAACTTTTGCTGCCGACGTTGTGGAAGTCACTGAACAGGTTGCTGAAAGTGAAAAAGCGCAGCCTGAAGCGGAAGTCGTTGCACAGCCGGAACCGGTCGTAGAAGAAACGCCGGAGCCAGTGGCTATCGAACGTGAAGAGCTGCCGTTGCCGGAAGACGTCAACGCCGAAGCGGTTTCGCCAGAAGAGTGGCAGGCTGAAGCGGAAACCGTAGAGATTGTCGAAGCGGCGGAAGAAGAAGCGGCTAAAGAAGAAATTACCGACGAAGAGCTGGAAACGGCGCTGGCTGCCGAAGCGGCAGAAGAGGCGGTGATGGTGGTTCCTCCGGCAGAAGAAGAGCAGCCGGTGGAAGAAATCGCTCAGGAGCAGGAAAAACCGACCAAAGAAGGTTTTTTCGCGCGCCTGAAACGCAGCCTGTTAAAAACCAAAGAAAATCTCGGTTCCGGATTTATCAGCCTGTTCCGCGGTAAAAAAATCGACGATGATCTGTTTGAGGAGCTGGAAGAGCAGCTTTTGATCGCCGATGTGGGTGTGGAAACCACACGTAAAATTATCACCAATCTGACGGAAGGCGCATCCCGCAAGCAGCTTCGTGACGCCGAGGCGCTCTATGGCCTGCTGAAAGAAGAGATGGGCGAGATTCTGGCGAAAGTCGATGAGCCGCTGAATGTTGAAGGCAAAGCGCCGTTTGTGATCCTGATGGTGGGCGTCAACGGTGTGGGTAAAACCACGACGATTGGTAAGCTGGCGCGTCAGTTTGAGCAGCAGGGTAAATCGGTGATGCTGGCGGCGGGTGATACTTTCCGTGCAGCTGCGGTTGAACAGCTTCAGGTCTGGGGTCAGCGCAACAATATTCCGGTGATTGCCCAGCATACCGGGGCGGATTCCGCCTCTGTTATCTTCGACGCCATTCAGGCAGCTAAAGCGCGTAATATCGACGTCCTGATTGCCGATACAGCCGGACGCCTGCAGAACAAATCGCACCTGATGGAAGAGTTGAAGAAAATCGTCCGCGTGATGAAGAAACTCGACGTTGAAGCGCCGCATGAAGTTATGCTGACTATTGATGCCAGCACCGGGCAGAACGCGGTAAGCCAGGCCAAACTGTTCCATGAAGCCGTTGGCTTAACCGGCATCACGCTAACGAAACTGGACGGCACGGCGAAAGGCGGGGTAATTTTCTCGGTGGCTGACCAGTTTGGTATCCCTATCCGCTACATTGGTGTCGGCGAACGTATTGAGGATTTGCGTCCGTTTAAGGCGGACGACTTTATAGAGGCACTTTTTGCCCGAGAGGATTAA", + "dna_sequence_length": 1494, + "functions": [ + "Signal Recognition Particle (SRP) receptor" + ], + "id": "CDS_3400", + "location": [ + [ + "NC_000913", + 3604243, + "-", + 1494 + ] + ], + "md5": "2eaffa6dca19e4de1b69fa00b970a51a", + "parent_gene": "", + "protein_md5": "233bc2755a82238e8bb6ecca7feb7762", + "protein_translation": "MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEPVKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETPEPVAIEREELPLPEDVNAEAVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELETALAAEAAEEAVMVVPPAEEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED", + "protein_translation_length": 497, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011321" + ], + [ + "gene_synonym", + "ECK3449" + ], + [ + "gene_synonym", + "EcoGene:EG10343" + ], + [ + "gene_synonym", + "GI:16131337" + ], + [ + "gene_synonym", + "GeneID:947977" + ], + [ + "gene_synonym", + "JW3430" + ], + [ + "gene_synonym", + "NP_417922.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADX9" + ], + [ + "gene_synonym", + "b3465" + ], + [ + "gene_synonym", + "rsmD" + ], + [ + "gene_synonym", + "yhhF" + ] + ], + "dna_sequence": "ATGAAAAAACCGAATCATTCCGGCAGCGGCCAAATCCGCATTATTGGCGGGCAGTGGCGAGGCCGTAAACTCCCGGTTCCTGATAGCCCAGGTCTGCGCCCCACCACCGACCGCGTACGCGAAACGTTGTTTAACTGGCTGGCTCCGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCAACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACAGCAACGCGATGTCATTCCTGGCGCAAAAAGGTACACCGCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCTGCCCACTGTTCCAGCAAACTGGTCATTACATCGGGAAAAAGTGGCGGGTCAGGTGGCTTATCGGCTGTATCAACGCGAAGCACAAGGAGAAAGTGATGCTGATTAA", + "dna_sequence_length": 597, + "functions": [ + "16S rRNA m(2)G966 methyltransferase, SAM-dependent" + ], + "id": "CDS_3401", + "location": [ + [ + "NC_000913", + 3604393, + "+", + 597 + ] + ], + "md5": "517a025e21efb079e8af9cd37d3ebd4b", + "parent_gene": "", + "protein_md5": "6b217f4d5af8d85ecdd645e88f396cda", + "protein_translation": "MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011323" + ], + [ + "gene_synonym", + "ECK3450" + ], + [ + "gene_synonym", + "EcoGene:EG12212" + ], + [ + "gene_synonym", + "GI:16131338" + ], + [ + "gene_synonym", + "GeneID:947976" + ], + [ + "gene_synonym", + "JW5683" + ], + [ + "gene_synonym", + "NP_417923.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37614" + ], + [ + "gene_synonym", + "b3466" + ], + [ + "gene_synonym", + "yhhL" + ] + ], + "dna_sequence": "ATGCTGATTAATATTGGTCGTTTGTTAATGCTCTGCGTTTGGGGATTTTTAATCCTCAACCTGGTGCATCCCTTCCCACGCCCGCTGAATATCTTCGTTAACGTGGCGCTGATTTTTACCGTGCTGATGCATGGTATGCAGCTGGCGCTATTGAAATCCACTTTACCGAAAGATGGCCCGCAGATGACCACCGCCGAAAAGGTACGGATTTTCCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAA", + "dna_sequence_length": 270, + "functions": [ + "DUF1145 family protein" + ], + "id": "CDS_3402", + "location": [ + [ + "NC_000913", + 3604979, + "+", + 270 + ] + ], + "md5": "01f5ac36241306c23f25291211f3478a", + "parent_gene": "", + "protein_md5": "731798065aac5c810116fb4002e87f6c", + "protein_translation": "MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLAWQKKFKVKK", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011325" + ], + [ + "gene_synonym", + "ECK3451" + ], + [ + "gene_synonym", + "EcoGene:EG12213" + ], + [ + "gene_synonym", + "GI:16131339" + ], + [ + "gene_synonym", + "GeneID:947975" + ], + [ + "gene_synonym", + "JW3432" + ], + [ + "gene_synonym", + "NP_417924.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37615" + ], + [ + "gene_synonym", + "b3467" + ], + [ + "gene_synonym", + "yhhM" + ] + ], + "dna_sequence": "ATGAGCAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATTGTCGTCGCCGCATCGTTTCGTTTTATGCAACAGCGACGGGAAAAAGCTGATAATGATATGGCTCCGCTCCAGCAAAAGCTGGTGGTGGTGAGCAACAAGCGGGAAAAACCGATTAACGATCGCCGTTCGCGCCAGCAGGAAGTGACTCCGGCAGGCACCAGTATACGCTATGAGGCAAGCTTCAAACCGCAAAGCGGAGGAATGGAGCAGACGTTTCGCCTCGACGCCCAGCAGTACCACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAAGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAA", + "dna_sequence_length": 360, + "functions": [ + "DUF2500 family protein" + ], + "id": "CDS_3403", + "location": [ + [ + "NC_000913", + 3605610, + "-", + 360 + ] + ], + "md5": "ffec33194d417a6b44c7f1be9eae336c", + "parent_gene": "", + "protein_md5": "7cee527f7c119ddd36f97f62295d0fcb", + "protein_translation": "MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSIRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011329" + ], + [ + "gene_synonym", + "ECK3452" + ], + [ + "gene_synonym", + "EcoGene:EG12214" + ], + [ + "gene_synonym", + "GI:16131340" + ], + [ + "gene_synonym", + "GeneID:947973" + ], + [ + "gene_synonym", + "JW3433" + ], + [ + "gene_synonym", + "NP_417925.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI9" + ], + [ + "gene_synonym", + "b3468" + ], + [ + "gene_synonym", + "yhhN" + ] + ], + "dna_sequence": "ATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCATGGCTATCTGTGGATGCATCGTATCGTGGGCCAACCTGGCAACGCTGGGTGTTTAAACCGTTAACCCTTCTTCTCCTGCTGTTACTGGCCTGGCAAGCGCCGATGTTCGACGCCATTAGCTATCTGGTGCTGGCAGGGCTGTGCGCCTCACTGCTGGGCGATGCGCTAACCCTGTTGCCACGTCAACGTCTGATGTACGCCATCGGCGCGTTTTTCCTCTCGCACCTGCTGTACACCATCTATTTCGCCAGTCAGATGACGCTCTCTTTCTTCTGGCCTCTACCACTGGTGCTGCTGGTTCTGGGTGCGCTGTTACTGGCGATTATCTGGACGCGCCTGGAAGAGTACCGTTGGCCTATCTGCACGTTTATCGGCATGACGCTGGTGATGGTGTGGCTGGCAGGTGAACTGTGGTTCTTCCGTCCGACCGCTCCGGCGCTCTCTGCGTTTGTTGGCGCTTCGTTGCTGTTTATCAGTAACTTTGTCTGGCTGGGGAGCCACTATCGCCGACGCTTCCGTGCGGATAACGCGATTGCTGCGGCCTGCTACTTTGCCGGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGA", + "dna_sequence_length": 627, + "functions": [ + "TMEM86 family putative inner membrane protein" + ], + "id": "CDS_3404", + "location": [ + [ + "NC_000913", + 3605751, + "+", + 627 + ] + ], + "md5": "fe39fac51b1de72e616f48cb93540b2e", + "parent_gene": "", + "protein_md5": "5f7576ae25377f28389d220901852c51", + "protein_translation": "MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011332" + ], + [ + "gene_synonym", + "ECK3453" + ], + [ + "gene_synonym", + "EcoGene:EG12215" + ], + [ + "gene_synonym", + "GI:16131341" + ], + [ + "gene_synonym", + "GeneID:947972" + ], + [ + "gene_synonym", + "JW3434" + ], + [ + "gene_synonym", + "NP_417926.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37617" + ], + [ + "gene_synonym", + "b3469" + ], + [ + "gene_synonym", + "yhhO" + ], + [ + "gene_synonym", + "zntA" + ] + ], + "dna_sequence": "ATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCACGCCAACTCTCTCTGAAAACGTCTCCGGCACCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTGCGCGCAAGGTAGAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTTGCTGCTGTTTTTGATTGGTGAACGACTGGAAGGCTGGGCCGCCAGCCGCGCGCGTCAGGGCGTTAGCGCGTTAATGGCGCTGAAACCAGAAACCGCCACGCGCCTGCGTAAGGGTGAGCGGGAAGAGGTGGCGATTAACAGCCTGCGCCCTGGCGATGTGATTGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGCCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGTGACGCTGGTGCCACCGCTGCTGTTTGCCGCCAGCTGGCAGGAGTGGATTTATAAAGGGCTGACGCTGCTGCTGATTGGCTGCCCGTGTGCGTTAGTTATCTCAACGCCTGCGGCGATTACCTCCGGGCTGGCGGCGGCAGCGCGTCGTGGGGCGTTGATTAAAGGCGGAGCGGCGCTGGAACAGCTGGGTCGTGTTACTCAGGTGGCGTTTGATAAAACCGGTACGCTGACCGTCGGTAAACCGCGCGTTACCGCGATTCATCCGGCAACGGGTATTAGTGAATCTGAACTGCTGACACTGGCGGCGGCGGTCGAGCAAGGCGCGACGCATCCACTGGCGCAAGCCATCGTACGCGAAGCACAGGTTGCTGAACTCGCCATTCCCACCGCCGAATCACAGCGGGCGCTGGTCGGGTCTGGCATTGAAGCGCAGGTTAACGGTGAGCGCGTATTGATTTGCGCTGCCGGGAAACATCCCGCTGATGCATTTACTGGTTTAATTAACGAACTGGAAAGCGCCGGGCAAACGGTAGTGCTGGTAGTACGTAACGATGACGTGCTTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAGTCAAAGCGGTGACCGAGCTGAATCAACATGCGCCGCTGGCGATGGTCGGTGACGGTATTAACGACGCGCCAGCGATGAAAGCTGCCGCCATCGGGATTGCAATGGGTAGCGGCACAGACGTGGCGCTGGAAACCGCCGACGCAGCATTAACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA", + "dna_sequence_length": 2199, + "functions": [ + "zinc, cobalt and lead efflux system" + ], + "id": "CDS_3405", + "location": [ + [ + "NC_000913", + 3606451, + "+", + 2199 + ] + ], + "md5": "000b3e6647cae8e546dddf5b2636d439", + "parent_gene": "", + "protein_md5": "2aa0ef679f09628a20f90c8c936d0899", + "protein_translation": "MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSTPTLSENVSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQAAEEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETATRLRKGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEAQVNGERVLICAAGKHPADAFTGLINELESAGQTVVLVVRNDDVLGVIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR", + "protein_translation_length": 732, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011336" + ], + [ + "gene_synonym", + "ECK3454" + ], + [ + "gene_synonym", + "EcoGene:EG12216" + ], + [ + "gene_synonym", + "GI:16131342" + ], + [ + "gene_synonym", + "GeneID:947974" + ], + [ + "gene_synonym", + "JW3435" + ], + [ + "gene_synonym", + "NP_417927.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A890" + ], + [ + "gene_synonym", + "b3470" + ], + [ + "gene_synonym", + "sirA" + ], + [ + "gene_synonym", + "tusA" + ], + [ + "gene_synonym", + "yhhP" + ] + ], + "dna_sequence": "ATGACCGATCTCTTTTCCAGCCCTGACCACACACTCGACGCGCTTGGCCTGCGCTGCCCGGAACCGGTGATGATGGTGCGCAAAACCGTGCGCAATATGCAGCCTGGCGAAACGTTGCTGATTATCGCCGACGATCCGGCCACTACCCGCGATATTCCTGGGTTTTGTACCTTTATGGAACACGAACTGGTTGCTAAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGA", + "dna_sequence_length": 246, + "functions": [ + "mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase" + ], + "id": "CDS_3406", + "location": [ + [ + "NC_000913", + 3608996, + "-", + 246 + ] + ], + "md5": "224df1f627c6f2345b61fd5b299e7875", + "parent_gene": "", + "protein_md5": "5a422db384aafff6e9de57f0759b81fb", + "protein_translation": "MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011340" + ], + [ + "gene_synonym", + "ECK3455" + ], + [ + "gene_synonym", + "EcoGene:EG12217" + ], + [ + "gene_synonym", + "GI:16131343" + ], + [ + "gene_synonym", + "GeneID:947984" + ], + [ + "gene_synonym", + "JW3436" + ], + [ + "gene_synonym", + "NP_417928.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37619" + ], + [ + "gene_synonym", + "b3471" + ], + [ + "gene_synonym", + "yhhQ" + ] + ], + "dna_sequence": "ATGAACGTTTTCTCGCAAACTCAACGCTATAAGGCGTTGTTCTGGTTATCGTTATTTCATCTGCTGGTGATCACCTCCAGTAACTATCTGGTTCAGCTTCCCGTCTCCATTTTGGGTTTCCATACCACCTGGGGCGCGTTTAGCTTTCCGTTTATTTTTCTTGCTACCGACCTGACCGTGCGTATTTTTGGCGCACCGCTGGCCCGACGCATTATCTTCGCGGTAATGATCCCTGCGTTATTAATCTCCTACGTCATCTCGTCGCTATTCTATATGGGTTCCTGGCAGGGATTCGGCGCACTCGCCCACTTCAACCTGTTTGTCGCCCGTATCGCCACCGCCAGTTTCATGGCCTACGCGCTGGGGCAAATCCTCGACGTGCACGTTTTTAACCGCCTGCGTCAGAGTCGCCGCTGGTGGCTGGCACCGACAGCGTCCACACTGTTCGGTAACGTCAGCGACACGCTGGCCTTTTTCTTCATTGCCTTCTGGCGTAGCCCGGATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAA", + "dna_sequence_length": 666, + "functions": [ + "DUF165 family inner membrane protein" + ], + "id": "CDS_3407", + "location": [ + [ + "NC_000913", + 3609217, + "+", + 666 + ] + ], + "md5": "b54047159a53072a81c7d0d62ecb4fcd", + "parent_gene": "", + "protein_md5": "1b834039054126a30266a06018e5a481", + "protein_translation": "MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011342" + ], + [ + "gene_synonym", + "ECK3456" + ], + [ + "gene_synonym", + "EcoGene:EG12218" + ], + [ + "gene_synonym", + "GI:90111595" + ], + [ + "gene_synonym", + "GeneID:947983" + ], + [ + "gene_synonym", + "JW5682" + ], + [ + "gene_synonym", + "NP_417929.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEE1" + ], + [ + "gene_synonym", + "b3472" + ], + [ + "gene_synonym", + "dcrB" + ], + [ + "gene_synonym", + "yhhR" + ] + ], + "dna_sequence": "ATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTACGGCGCAGGGTTCGGTCGCGGAAAGTAACGCTACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATGATCCGAAAGAAGATCTGGCGGTGCTGGCGAAGCGTCTGGAAGATCAGCAACGTAGCCGCGATCCGCAGCTGCAAGTGGTAACCAATAAAGCCATTGAGCTGAAAGGTCACAAAATGCAGCAGTTAGACAGTATTATCTCCGCGAAAGGCCAGACGGCGTACTCTTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAA", + "dna_sequence_length": 558, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_3408", + "location": [ + [ + "NC_000913", + 3609955, + "+", + 558 + ] + ], + "md5": "d57a7cabb18a2fd74fc6e0da98f658f6", + "parent_gene": "", + "protein_md5": "2177f81e6b305ed683dc7fe8a2b8e1d5", + "protein_translation": "MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIINTLVIQ", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011344" + ], + [ + "gene_synonym", + "ECK3457" + ], + [ + "gene_synonym", + "EcoGene:EG12219" + ], + [ + "gene_synonym", + "GI:90111596" + ], + [ + "gene_synonym", + "GeneID:947982" + ], + [ + "gene_synonym", + "JW5945" + ], + [ + "gene_synonym", + "NP_417930.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37621" + ], + [ + "gene_synonym", + "b3473" + ], + [ + "gene_synonym", + "yhhS" + ] + ], + "dna_sequence": "ATGCCCGAACCCGTAGCCGAACCCGCGCTAAACGGATTGCGCCTGAATTTGCGCATTGTCTCTATAGTCATGTTTAACTTCGCCAGCTACCTCACCATCGGGTTGCCGCTCGCTGTATTACCGGGCTATGTCCATGATGTGATGGGCTTTAGCGCCTTCTGGGCAGGATTGGTTATCAGCCTGCAATATTTCGCCACCTTGCTGAGCCGCCCTCATGCCGGACGTTACGCCGATTCGCTGGGACCCAAAAAGATTGTCGTCTTCGGTTTATGCGGCTGCTTTTTGAGCGGTCTGGGGTATCTGACGGCAGGATTAACCGCCAGTCTGCCTGTCATCAGCCTGTTATTACTTTGCCTGGGGCGCGTCATCCTTGGGATTGGGCAAAGTTTTGCCGGAACGGGATCGACCCTATGGGGCGTTGGCGTGGTTGGCTCGCTGCATATCGGGCGGGTGATTTCGTGGAACGGCATTGTCACTTACGGGGCGATGGCGATGGGTGCGCCGTTAGGCGTCGTGTTTTATCACTGGGGCGGCTTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCCGCGTCCGACGGTAAAAGCCAGTAAAGGCAAACCGCTGCCGTTTCGCGCGGTGCTTGGGCGCGTCTGGCTGTACGGTATGGCGCTGGCACTGGCTTCCGCCGGATTTGGCGTCATCGCCACCTTTATCACGCTGTTTTATGACGCTAAAGGTTGGGACGGTGCGGCTTTCGCGCTGACGCTGTTTAGCTGTGCGTTTGTCGGTACGCGTTTGTTATTCCCTAACGGCATTAACCGTATCGGTGGCTTAAACGTAGCGATGATTTGCTTTAGCGTTGAGATAATCGGCCTGCTACTGGTTGGCGTGGCGACTATGCCGTGGATGGCGAAAATCGGCGTCTTACTGGCGGGGGCCGGGTTTTCGCTGGTGTTCCCGGCATTGGGTGTAGTGGCGGTAAAAGCGGTTCCGCAGCAAAATCAGGGGGCGGCGCTGGCAACTTACACCGTATTTATGGATTTATCGCTTGGCGTGACTGGACCACTGGCTGGGCTGGTGATGAGCTGGGCGGGCGTACCGGTGATTTATCTGGCGGCGGCGGGACTGGTCGCAATCGCGTTATTACTGACGTGGCGATTAAAAAAACGGCCTCCGGAACACGTCCCTGAGGCCGCCTCATCATCTTAA", + "dna_sequence_length": 1218, + "functions": [ + "putative arabinose efflux transporter" + ], + "id": "CDS_3409", + "location": [ + [ + "NC_000913", + 3611733, + "-", + 1218 + ] + ], + "md5": "ee1491cce203a813d27697835efeb990", + "parent_gene": "", + "protein_md5": "0175a85ab238152866d13e1086a5a17d", + "protein_translation": "MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADSLGPKKIVVFGLCGCFLSGLGYLTAGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKKRPPEHVPEAASSS", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011347" + ], + [ + "gene_synonym", + "ECK3458" + ], + [ + "gene_synonym", + "EcoGene:EG12220" + ], + [ + "gene_synonym", + "GI:90111597" + ], + [ + "gene_synonym", + "GeneID:947980" + ], + [ + "gene_synonym", + "JW5680" + ], + [ + "gene_synonym", + "NP_417931.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM0" + ], + [ + "gene_synonym", + "b3474" + ], + [ + "gene_synonym", + "yhhT" + ] + ], + "dna_sequence": "ATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCAGCGGCAGATATCATTGTGCAGCTGTTACTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTAGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTTAATAAGGAGCTGACGCGCAAACTTTTTAAATTGCAGGAGATGTTGCCTTTTCTTAATTTGCATATGTCGCCGGAGCGAATGCTGCAGCGGATGGACTCGGAAAAAGTGGTTACCTTCACCACAGCGCTAATGACCGGGCTTTCCGGGGCAATGGCGAGCGTGCTTTTGCTGGTGATGACCGTAGTTTTTATGCTGTTTGAAGTGCGCCACGTCCCTTACAAAATGCGTTTTGCGCTGAATAATCCACAGATTCACATCGCGGGATTACACCGCGCACTTAAAGGCGTTTCGCACTATCTTGCATTGAAGACGCTACTCAGTTTATGGACAGGTGTCATCGTCTGGCTGGGGCTGGAGCTGATGGGGGTGCAGTTTGCGCTGATGTGGGCAGTACTGGCGTTTTTGCTCAACTACGTGCCCAATATCGGCGCGGTAATTTCCGCCGTACCGCCAATGATTCAGGTGCTGCTGTTTAATGGTGTTTACGAATGTATTCTGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGATGGAAACCACCAAAGGCGGTAGCAAACTGGCGATTTTACTGGGGCCGGGCAGACCGAAAAGTCGGTTACCGGGATGA", + "dna_sequence_length": 1050, + "functions": [ + "UPF0118 family putative transporter" + ], + "id": "CDS_3410", + "location": [ + [ + "NC_000913", + 3611865, + "+", + 1050 + ] + ], + "md5": "42b9bf9ab5a5eec020d8dfa6a127896b", + "parent_gene": "", + "protein_md5": "8331c8df7ca3a6355b182e261c86154c", + "protein_translation": "METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011351" + ], + [ + "gene_synonym", + "ECK3459" + ], + [ + "gene_synonym", + "EcoGene:EG12221" + ], + [ + "gene_synonym", + "GI:16131347" + ], + [ + "gene_synonym", + "GeneID:947979" + ], + [ + "gene_synonym", + "JW3440" + ], + [ + "gene_synonym", + "NP_417932.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37623" + ], + [ + "gene_synonym", + "acpT" + ], + [ + "gene_synonym", + "b3475" + ], + [ + "gene_synonym", + "yhhU" + ] + ], + "dna_sequence": "ATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCGGAGATCATCTATGGCGAACAAGGCAAACCTGCATTTGCGCCGGAAATGCCGCTATGGTTCAACTTAAGCCATAGCGGTGACGATATCGCCCTGCTGTTGAGTGATGAAGGCGAAGTCGGCTGCGATATCGAAGTGATTCGCCCGCGCGCCAACTGGCGCTGGCTGGCGAACGCCGTATTCAGCCTCGGGGAACACGCTGAGATGGACGCCGTGCATCCTGATCAGCAACTGGAAATGTTCTGGCGCATCTGGACGCGCAAAGAAGCCATCGTTAAACAGCGTGGCGGCAGCGCCTGGCAAATCGTCAGCGTAGACAGCACCTATCACTCCTCGCTGTCAGTCAGCCATTGTCAGCTTGAAAATTTAAGCCTTGCGATCTGCACCCCTACTCCCTTTACGCTCACCGCCGACAGTGTGCAATGGATCGATTCAGTTAACTGA", + "dna_sequence_length": 588, + "functions": [ + "4'-phosphopantetheinyl transferase" + ], + "id": "CDS_3411", + "location": [ + [ + "NC_000913", + 3612969, + "+", + 588 + ] + ], + "md5": "053550baf0c52dadf86d84a853cb6641", + "parent_gene": "", + "protein_md5": "bf988953eba496afa2b4fe4ebd3ae75c", + "protein_translation": "MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPAFAPEMPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011354" + ], + [ + "gene_synonym", + "ECK3460" + ], + [ + "gene_synonym", + "EcoGene:EG12075" + ], + [ + "gene_synonym", + "GI:16131348" + ], + [ + "gene_synonym", + "GeneID:947981" + ], + [ + "gene_synonym", + "JW3441" + ], + [ + "gene_synonym", + "NP_417933.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33590" + ], + [ + "gene_synonym", + "b3476" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "nikA" + ] + ], + "dna_sequence": "ATGCTCTCCACACTCCGCCGCACTCTATTTGCGCTGCTGGCTTGTGCGTCTTTTATCGTCCATGCCGCTGCACCAGATGAAATCACCACCGCCTGGCCGGTGAATGTCGGGCCACTAAACCCGCACCTTTACACGCCTAACCAGATGTTCGCCCAGAGCATGGTTTATGAACCATTGGTGAAATATCAGGCAGACGGTTCGGTGATCCCGTGGCTGGCAAAAAGCTGGACTCATTCAGAAGATGGTAAAACCTGGACCTTCACCCTGCGTGATGACGTGAAATTCTCCAACGGTGAACCGTTCGATGCCGAGGCGGCGGCAGAAAACTTCCGCGCAGTGCTCGATAACCGTCAACGTCACGCCTGGCTGGAGCTGGCAAACCAGATTGTTGATGTTAAAGCACTCAGTAAAACAGAGCTGCAAATTACCCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCTCCCTCGCAGTTTAAAAACCATGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGACCGTGGATTTTGCAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCAGCGATTAAAAAGATCACCTTTAACGTCATCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAACTGGCGATATCGACCTGCTGTACGGAAACGAAGGGTTATTACCGCTCGATACCTTCGCCCGCTTTAGCCAGAATCCGGCTTACCACACCCAACTGTCACAGCCGATCGAAACCGTGATGCTGGCGCTCAATACCGCCAAAGCCCCCACCAACGAGCTGGCAGTACGTGAAGCTCTTAATTACGCGGTAAACAAAAAATCGCTGATTGATAACGCGTTGTATGGCACCCAGCAGGTCGCCGACACCCTGTTTGCCCCTTCTGTGCCCTACGCCAACCTCGGCCTGAAACCGAGCCAGTACGATCCGCAAAAAGCGAAAGCGTTGCTGGAAAAAGCCGGTTGGACGCTGCCTGCGGGCAAAGACATCCGCGAGAAAAATGGTCAGCCGCTGCGCATTGAACTTTCGTTCATCGGCACCGATGCGTTAAGCAAATCGATGGCGGAAATCATTCAGGCTGATATGCGCCAGATTGGCGCAGATGTCTCGCTGATTGGCGAAGAAGAGAGCAGTATCTATGCTCGTCAGCGCGACGGTCGTTTTGGCATGATTTTCCACCGCACCTGGGGCGCGCCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCGACCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCTACGCGCCGATCGCCACCGAAATTCCGTTCGAACAGATTAAACCGGTGAAACCTTAA", + "dna_sequence_length": 1575, + "functions": [ + "nickel/heme ABC transporter periplasmic binding protein" + ], + "id": "CDS_3412", + "location": [ + [ + "NC_000913", + 3613667, + "+", + 1575 + ] + ], + "md5": "60ea2c028caf05dee5ced30be1a127d2", + "parent_gene": "", + "protein_md5": "b46dc9d776715839552090d863e67590", + "protein_translation": "MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP", + "protein_translation_length": 524, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011356" + ], + [ + "gene_synonym", + "ECK3461" + ], + [ + "gene_synonym", + "EcoGene:EG12076" + ], + [ + "gene_synonym", + "GI:16131349" + ], + [ + "gene_synonym", + "GeneID:947986" + ], + [ + "gene_synonym", + "JW3442" + ], + [ + "gene_synonym", + "NP_417934.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33591" + ], + [ + "gene_synonym", + "b3477" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "nikB" + ] + ], + "dna_sequence": "ATGTTGCGTTACGTATTACGCCGCTTTCTGCTGCTGATCCCGATGGTGCTCGCCGCCTCGGTGATCATTTTTCTGATGCTGCGCCTCGGTACCGGCGACCCGGCGCTCGATTATTTGCGTCTGTCTAACCTGCCGCCGACGCCGGAGATGCTGGCCTCTACCCGCACCATGCTGGGACTGGATCAGCCGCTGTACGTCCAGTACGGCACCTGGTTGTGGAAGGCGCTGCATCTTGACTTTGGTATCTCATTCGCCAGCCAACGCCCGGTACTGGACGATATGCTGAACTTCCTGCCCGCCACGCTGGAACTTGCAGGTGCGGCGCTGGTATTAATTCTGCTCACTTCCGTACCGCTCGGTATCTGGGCGGCGCGCCATCGCGACCGTCTGCCGGATTTCGCCGTACGTTTCATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACATCCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGATTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCTGATGATGGTGGTGGTTTTTGTGGTCTGTAATTTGATTGTCGATTTGCTCAACGCCGCGCTGGACCCGCGCATTCGTCGTCATGAAGGAGCGCACGCGTGA", + "dna_sequence_length": 945, + "functions": [ + "nickel ABC transporter permease" + ], + "id": "CDS_3413", + "location": [ + [ + "NC_000913", + 3615241, + "+", + 945 + ] + ], + "md5": "9567141b38c288924dd0bebd57dc0498", + "parent_gene": "", + "protein_md5": "35e173d071fe7b3a1f9fcc71f85b73bd", + "protein_translation": "MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011358" + ], + [ + "gene_synonym", + "ECK3462" + ], + [ + "gene_synonym", + "EcoGene:EG12077" + ], + [ + "gene_synonym", + "GI:16131350" + ], + [ + "gene_synonym", + "GeneID:947990" + ], + [ + "gene_synonym", + "JW3443" + ], + [ + "gene_synonym", + "NP_417935.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA9" + ], + [ + "gene_synonym", + "b3478" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "nikC" + ] + ], + "dna_sequence": "GTGAACTTTTTCCTCTCTTCCCGCTGGTCGGTACGCCTGGCGCTGATCATTATCGCCCTGCTGGCGCTGATTGCGCTCACCAGCCAGTGGTGGCTGCCGTATGACCCACAGGCGATTGATTTGCCGTCGCGCCTGCTTTCGCCGGATGCGCAGCACTGGCTGGGCACCGATCACTTAGGTCGCGATATTTTCTCGCGGCTGATGGCAGCGACCCGCGTGTCGCTCGGTTCGGTAATGGCCTGCCTGCTGCTGGTGCTGACATTAGGGCTGGTTATTGGCGGCAGCGCCGGGTTGATTGGCGGGCGCGTTGATCAGGCCACCATGCGCGTCGCCGATATGTTTATGACCTTCCCGACCTCGATTCTGTCGTTCTTTATGGTTGGCGTGCTCGGCACCGGGCTGACCAACGTAATTATCGCCATCGCCCTGTCGCACTGGGCGTGGTATGCACGCATGGTGCGCAGCCTGGTGATTTCACTACGCCAACGCGAGTTTGTGCTGGCGTCACGGCTTTCCGGTGCGGGCCATGTGCGGGTGTTTGTCGATCATCTGGCAGGCGCGGTGATCCCTTCGCTGCTGGTGCTGGCAACGCTGGATATCGGCCATATGATGCTGCACGTCGCGGGGATGTCTTTCCTTGGCCTCGGTGTGACCGCGCCGACCGCCGAATGGGGCGTGATGATTAACGACGCGCGCCAGTATATCTGGACCCAGCCGCTGCAAATGTTCTGGCCGGGGCTGGCGCTGTTTATCAGCGTGATGGCCTTTAACCTGGTGGGTGACGCACTGCGCGATCATCTGGACCCTCATCTGGTGACGGAGCACGCACACTAA", + "dna_sequence_length": 834, + "functions": [ + "nickel ABC transporter permease" + ], + "id": "CDS_3414", + "location": [ + [ + "NC_000913", + 3616182, + "+", + 834 + ] + ], + "md5": "6f6d4e61e730699aae4cfff2fcf5e3e5", + "parent_gene": "", + "protein_md5": "a83ef7fa5029f22dd900045c96542cdd", + "protein_translation": "MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011360" + ], + [ + "gene_synonym", + "ECK3463" + ], + [ + "gene_synonym", + "EcoGene:EG12078" + ], + [ + "gene_synonym", + "GI:16131351" + ], + [ + "gene_synonym", + "GeneID:947989" + ], + [ + "gene_synonym", + "JW3444" + ], + [ + "gene_synonym", + "NP_417936.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33593" + ], + [ + "gene_synonym", + "b3479" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "nikD" + ] + ], + "dna_sequence": "ATGCCGCAACAGATTGAACTACGTAATATCGCGCTACAGGCCGCGCAGCCGCTGGTACACGGTGTATCGTTAACCCTGCAACGCGGGCGCGTGCTGGCGTTAGTCGGCGGTAGCGGCAGCGGGAAATCATTAACCTGCGCCGCAACGCTGGGCATTTTGCCCGCTGGCGTTCGCCAGACGGCGGGGGAAATTTTAGCCGATGGCAAACCGGTTTCGCCTTGCGCCCTGCGCGGCATCAAAATTGCCACCATCATGCAGAACCCGCGCAGCGCCTTTAATCCACTGCACACCATGCACACCCACGCGCGGGAAACCTGCCTGGCGTTAGGGAAACCCGCCGATGACGCTACGCTTACCGCTGCCATAGAAGCGGTGGGGCTGGAAAACGCCGCGCGCGTGCTGAAGCTGTACCCGTTCGAGATGAGCGGCGGCATGTTGCAGCGCATGATGATTGCGATGGCGGTGCTGTGTGAATCACCGTTTATCATCGCCGATGAACCGACCACCGACCTTGACGTGGTAGCACAGGCGCGCATCCTCGATCTGCTGGAAAGCATTATGCAAAAACAAGCGCCGGGAATGCTGCTGGTGACCCATGATATGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGA", + "dna_sequence_length": 765, + "functions": [ + "nickel ABC transporter ATPase" + ], + "id": "CDS_3415", + "location": [ + [ + "NC_000913", + 3617015, + "+", + 765 + ] + ], + "md5": "9ac607ed72bc8c80afb44920f743ed3b", + "parent_gene": "", + "protein_md5": "de7db2d0f9ab1a946d51bc7ec8d5ac64", + "protein_translation": "MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011362" + ], + [ + "gene_synonym", + "ECK3464" + ], + [ + "gene_synonym", + "EcoGene:EG12079" + ], + [ + "gene_synonym", + "GI:16131352" + ], + [ + "gene_synonym", + "GeneID:947987" + ], + [ + "gene_synonym", + "JW3445" + ], + [ + "gene_synonym", + "NP_417937.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33594" + ], + [ + "gene_synonym", + "b3480" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "nikE" + ] + ], + "dna_sequence": "ATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTCCCTGACCCTGAAAAGCGGCGAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAGCGAAATGCTGAAGGCGGTCGATCTCGATGACAGCGTTCTCGACAAACGCCCACCGCAGTTAAGCGGCGGCCAGCTCCAGCGCGTCTGCCTGGCTCGCGCGCTGGCGGTCGAACCGAAACTACTGATTCTGGATGAAGCCGTTTCTAACCTTGATCTCGTGTTACAGGCGGGTGTCATTCGCCTGCTGAAAAAGCTACAACAACAGTTTGGCACCGCCTGCCTGTTCATCACCCACGACTTACGCCTGGTAGAACGCTTTTGCCAGCGGGTAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAA", + "dna_sequence_length": 807, + "functions": [ + "nickel ABC transporter ATPase" + ], + "id": "CDS_3416", + "location": [ + [ + "NC_000913", + 3617776, + "+", + 807 + ] + ], + "md5": "76ce30475e96e4e611a3a662600ed543", + "parent_gene": "", + "protein_md5": "757c84b5cc916734d4a91092224de0ca", + "protein_translation": "MTLLNISGLSHHYAHGGFNGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPAQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGEKLTFSSDAGRVLQNAVLPAFPVRRRTTEKV", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011366" + ], + [ + "gene_synonym", + "ECK3465" + ], + [ + "gene_synonym", + "EcoGene:EG11519" + ], + [ + "gene_synonym", + "GI:16131353" + ], + [ + "gene_synonym", + "GeneID:947995" + ], + [ + "gene_synonym", + "JW3446" + ], + [ + "gene_synonym", + "NP_417938.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6Z6" + ], + [ + "gene_synonym", + "b3481" + ], + [ + "gene_synonym", + "nikR" + ], + [ + "gene_synonym", + "yhhG" + ] + ], + "dna_sequence": "ATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGA", + "dna_sequence_length": 402, + "functions": [ + "transcriptional repressor, Ni-binding" + ], + "id": "CDS_3417", + "location": [ + [ + "NC_000913", + 3618588, + "+", + 402 + ] + ], + "md5": "574d5c784aa00ce013ee9bc26529e69a", + "parent_gene": "", + "protein_md5": "6d977bb96b25187abc5348661bf9f009", + "protein_translation": "MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011371" + ], + [ + "gene_synonym", + "ECK3466" + ], + [ + "gene_synonym", + "EcoGene:EG10847" + ], + [ + "gene_synonym", + "GI:49176361" + ], + [ + "gene_synonym", + "GeneID:947994" + ], + [ + "gene_synonym", + "JW5679" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16917" + ], + [ + "gene_synonym", + "YP_026224.1" + ], + [ + "gene_synonym", + "b3482" + ], + [ + "gene_synonym", + "rhsB" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGATATCAATTGAATCCGATATCAGACATCGACCCCCTGGGTTTATCTATGTGGGAGGATGCAAAATCGGGGGCATGTACTAATGGTCTTTGCGGCACACTATCCGCTATGATAGGTCCAGATAAATTTGATTCTATAGATAGCACCGCATATGACGCCTTAAATAAAATAAATAGCCAATCTATTTGCGAAGATAAAGAGTTCGCTGGTTTAATATGTAAGGATAATAGTGGCAGATATTTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGTCATTTTATTTAGGTACGCCCAGTGGTAATTTTAAAGCAATAGATAACCACGGGAAGGAAATAACAAACAGAAAAGGATTACCTAATGTCTGCAGAGTTCATGGTAATATGTAA", + "dna_sequence_length": 4236, + "functions": [ + "Rhs protein with DUF4329 family putative toxin domain", + "putative neighboring cell growth inhibitor" + ], + "id": "CDS_3418", + "location": [ + [ + "NC_000913", + 3619192, + "+", + 4236 + ] + ], + "md5": "e9bf47a72d6bf7468527eb17166648c0", + "parent_gene": "", + "protein_md5": "bb5349775b7aec8e396cc1219579c09f", + "protein_translation": "MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGLCGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKDNSGRYFSTAPNRGERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYLGTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM", + "protein_translation_length": 1411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011373" + ], + [ + "gene_synonym", + "ECK3467" + ], + [ + "gene_synonym", + "EcoGene:EG11520" + ], + [ + "gene_synonym", + "GI:90111598" + ], + [ + "gene_synonym", + "GeneID:947993" + ], + [ + "gene_synonym", + "JW3449" + ], + [ + "gene_synonym", + "NP_417940.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28911" + ], + [ + "gene_synonym", + "b3483" + ], + [ + "gene_synonym", + "yhhH" + ] + ], + "dna_sequence": "ATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGTAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAA", + "dna_sequence_length": 384, + "functions": [ + "putative NTF2 fold immunity protein for polymorphic toxin RhsB" + ], + "id": "CDS_3419", + "location": [ + [ + "NC_000913", + 3623399, + "+", + 384 + ] + ], + "md5": "179df13dcd005e7c330e8ef91b38e675", + "parent_gene": "", + "protein_md5": "b63fb11714ba2af00abcadccf55dc08f", + "protein_translation": "MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285073" + ], + [ + "gene_synonym", + "ECK3468" + ], + [ + "gene_synonym", + "EcoGene:EG14369" + ], + [ + "gene_synonym", + "GeneID:1450291" + ], + [ + "gene_synonym", + "JW5678" + ], + [ + "gene_synonym", + "b4552" + ], + [ + "gene_synonym", + "yrhC" + ] + ], + "dna_sequence": "ATGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTGCACTGACAAAAATTATATCCGTAGAGATATCGGAGCATTTATACTCGGGCAAATATAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGTGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCCAGG", + "dna_sequence_length": 351, + "id": "CDS_3420", + "location": [ + [ + "NC_000913", + 3623887, + "+", + 351 + ] + ], + "md5": "372f0882ee733a544abe87c35679f387", + "parent_gene": "", + "protein_md5": "6c702897ef8c9556ac210c1b8b619da7", + "protein_translation": "MSNTYQKRKASKEYGLYNKCKKLNDDELFRLLDDRNSLKRISSARVLQLRGGQDAVRLAIEFCTDKNYIRRDIGAFILGQI", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011377" + ], + [ + "gene_synonym", + "ECK3469" + ], + [ + "gene_synonym", + "EcoGene:EG11525" + ], + [ + "gene_synonym", + "GI:16131356" + ], + [ + "gene_synonym", + "GeneID:947992" + ], + [ + "gene_synonym", + "JW3451" + ], + [ + "gene_synonym", + "NP_417941.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28912" + ], + [ + "gene_synonym", + "b3484" + ], + [ + "gene_synonym", + "yhhI" + ] + ], + "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATGAGATTACAGCTATCCCAGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCGGTAAAAGGAACCCAGGGGCGGCTAAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATCAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAA", + "dna_sequence_length": 1137, + "functions": [ + "putative transposase" + ], + "id": "CDS_3421", + "location": [ + [ + "NC_000913", + 3624378, + "+", + 1137 + ] + ], + "md5": "6c188688fc3d21c45160dd8dc5bc1536", + "parent_gene": "", + "protein_md5": "a86d0c1ed049aa788670d814e60237c6", + "protein_translation": "MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011379" + ], + [ + "gene_synonym", + "ECK3470" + ], + [ + "gene_synonym", + "EcoGene:EG11767" + ], + [ + "gene_synonym", + "GI:226524752" + ], + [ + "gene_synonym", + "GeneID:947991" + ], + [ + "gene_synonym", + "JW5677" + ], + [ + "gene_synonym", + "NP_417942.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGH1" + ], + [ + "gene_synonym", + "b3485" + ], + [ + "gene_synonym", + "yhhJ" + ] + ], + "dna_sequence": "ATGCGCCATTTACGCAATATTTTTAATCTGGGTATCAAAGAGTTGCGCAGTCTGCTCGGTGATAAAGCGATGCTGACGCTGATTGTCTTCTCGTTTACGGTGTCGGTGTATTCGTCAGCGACCGTTACGCCAGGATCGTTGAACCTCGCGCCGATCGCCATTGCCGATATGGATCAATCGCAGTTATCGAACCGGATCGTTAACAGCTTCTATCGTCCGTGGTTTTTGCCACCGGAGATGATCACCGCCGATGAGATGGATGCCGGACTGGACGCCGGACGCTATACCTTCGCGATAAATATTCCGCCTAATTTTCAGCGTGATGTCCTCGCCGGACGCCAGCCGGATATTCAGGTGAACGTCGATGCCACGCGCATGAGCCAGGCATTTACCGGCAATGGGTATATCCAGAATATTATCAACGGTGAAGTGAACAGCTTTGTCGCGCGCTACCGTGATAACAGCGAACCGTTGGTATCGCTGGAAACCCGGATGCGCTTTAACCCGAACCTCGATCCCGCGTGGTTTGGCGGGGTGATGGCGATCATCAACAACATTACCATGCTGGCGATTGTATTGACCGGATCGGCGCTGATCCGCGAGCGTGAACACGGCACGGTGGAACACTTACTGGTGATGCCGATAACGCCGTTTGAGATCATGATGGCGAAGATCTGGTCGATGGGGCTGGTGGTGCTGGTGGTATCGGGATTATCGCTGGTGCTGATGGTGAAAGGTGTACTGGGCGTACCGATTGAAGGCTCGATCCCGCTGTTTATGCTGGGCGTGGCGCTCAGTCTGTTTGCCACCACGTCAATCGGCATTTTTATGGGGACGATAGCGCGTTCAATGCCGCAACTGGGGCTGCTGGTGATTCTGGTGCTGCTGCCGCTGCAAATGCTTTCCGGTGGTTCCACGCCGCGCGAAAGTATGCCGCAGATGGTGCAGGACATTATGCTGACCATGCCGACGACACACTTTGTTAGCCTCGCGCAGGCCATCCTCTACCGGGGTGCCGGATTCGAAATCGTCTGGCCGCAGTTTCTGACGCTGATGGCAATTGGCGGCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAA", + "dna_sequence_length": 1125, + "functions": [ + "putative ABC transporter permease" + ], + "id": "CDS_3422", + "location": [ + [ + "NC_000913", + 3626803, + "-", + 1125 + ] + ], + "md5": "fc50bc0ff0c7b2814c262035781d262f", + "parent_gene": "", + "protein_md5": "1c91ed2264018ff0eebbbf36e224c475", + "protein_translation": "MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA", + "protein_translation_length": 374, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011381" + ], + [ + "gene_synonym", + "ECK3471" + ], + [ + "gene_synonym", + "EcoGene:EG12223" + ], + [ + "gene_synonym", + "GI:49176363" + ], + [ + "gene_synonym", + "GeneID:947998" + ], + [ + "gene_synonym", + "JW5676" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37624" + ], + [ + "gene_synonym", + "YP_026225.1" + ], + [ + "gene_synonym", + "b3486" + ], + [ + "gene_synonym", + "rbbA" + ], + [ + "gene_synonym", + "yhiG" + ], + [ + "gene_synonym", + "yhiH" + ] + ], + "dna_sequence": "ATGACGCATCTGGAACTGGTTCCCGTCCCGCCTGTCGCGCAACTGGCGGGCGTGAGCCAGCATTATGGAAAAACCGTTGCGCTGAACAATATCACTCTCGATATTCCGGCCCGCTGTATGGTCGGGCTGATTGGCCCGGACGGCGTCGGGAAGTCGAGCTTGTTGTCGTTGATTTCCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCGACGTCTGCCCGCGCATCGCCTGGATGCCGCAGGGGCTGGGCAAAAACCTCTACCACACCTTGTCGGTGTATGAAAACGTCGATTTTTTCGCTCGCCTGTTCGGTCACGACAAAGCGGAGCGGGAAGTGCGAATCAATGAGCTGCTGACCAGCACCGGGTTAGCACCGTTTCGCGATCGTCCGGCAGGGAAACTCTCCGGCGGGATGAAGCAAAAACTTGGGCTGTGCTGCGCGTTAATCCACGACCCGGAACTGTTGATCCTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTCGACTGGCTGGTAGCGATGAATGCCGGAGAAGTGCTGGCAACTGGCAGCGCCGAAGAGCTACGGCAGCAAACGCAAAGCGCTACGCTGGAAGAAGCATTTATAAATCTGTTACCGCAAGCGCAACGCCAGGCGCATCAGGCGGTAGTGATCCCACCGTATCAACCTGAAAACGCAGAGATTGCCATCGAAGCGCGCGATCTGACCATGCGTTTTGGTTCCTTCGTTGCCGTTGATCACGTTAATTTCCGCATTCCACGCGGGGAGATTTTTGGTTTTCTTGGTTCGAACGGCTGCGGTAAATCCACCACCATGAAAATGCTCACCGGACTGCTGCCCGCCAGCGAAGGTGAGGCGTGGCTGTTCGGGCAACCGGTTGATCCAAAAGATATCGATACCCGCCGTCGGGTGGGCTATATGTCGCAGGCGTTTTCGCTCTATAACGAACTCACCGTGCGGCAAAACCTTGAGTTACATGCCCGTTTGTTTCACATCCCGGAAGCGGAAATTCCCGCAAGAGTGGCTGAAATGAGCGAGCGTTTTAAGCTCAACGACGTTGAAGATATTCTGCCGGAGTCATTGCCGCTCGGCATTCGCCAGCGGCTTTCGCTGGCGGTGGCGGTGATTCATCGCCCGGAGATGTTAATCCTCGATGAGCCTACTTCTGGTGTCGATCCGGTGGCGAGGGATATGTTCTGGCAGTTGATGGTCGATCTCTCGCGCCAGGACAAAGTGACTATCTTCATCTCCACCCACTTTATGAACGAAGCGGAACGTTGCGACCGCATCTCACTGATGCACGCCGGAAAAGTGCTTGCCAGCGGTACACCGCAGGAACTGGTTGAGAAACGCGGAGCCGCCAGTCTGGAAGAGGCATTTATCGCCTATTTGCAGGAAGCGGCAGGGCAGAGCAACGAAGCCGAAGCGCCGCCCGTGGTACACGACACCACCCACGCGCCGCGTCAGGGATTTAGCCTGCGCCGTCTGTTTAGCTACAGCCGCCGCGAAGCGCTGGAACTGCGACGCGATCCAGTACGTTCGACGCTGGCGCTGATGGGAACGGTGATCCTGATGCTGATAATGGGTTACGGCATCAGTATGGATGTGGAAAACCTGCGCTTTGCGGTGCTCGACCGCGACCAGACCGTCAGTAGCCAGGCGTGGACACTCAACCTCTCCGGTTCCCGTTACTTTATCGAACAGCCGCCGCTCACCAGTTATGACGAGCTTGATCGTCGGATGCGTGCGGGCGATATCACGGTGGCGATTGAGATCCCGCCCAATTTCGGGCGCGATATCGCGCGTGGTACGCCTGTGGAACTCGGCGTCTGGATCGACGGAGCGATGCCGAGCCGTGCTGAAACGGTAAAAGGTTACGTGCAGGCCATGCACCAGAGCTGGTTACAGGATGTGGCGAGCCGACAATCGACACCCGCCAGCCAAAGCGGGCTGATGAATATTGAGACGCGCTATCGCTATAACCCGGACGTAAAAAGCCTGCCAGCGATTGTTCCGGCGGTGATCCCGCTTCTGCTGATGATGATCCCGTCAATGCTAAGCGCCCTTAGCGTGGTGCGGGAAAAAGAGCTTGGGTCGATTATCAACCTTTACGTGACCCCCACCACGCGTAGTGAATTTTTGCTTGGTAAACAGTTGCCATACATCGCGCTGGGGATGCTGAACTTTTTCCTGCTCTGCGGCCTGTCGGTGTTTGTGTTTGGCGTACCGCATAAAGGCAGTTTCCTGACGCTCACCCTGGCGGCGCTGCTGTATATCATCATTGCCACCGGAATGGGGCTGCTGATCTCCACCTTTATGAAAAGCCAGATTGCCGCCATTTTCGGAACGGCGATTATCACGTTGATCCCGGCGACACAGTTTTCCGGGATGATCGATCCGGTAGCTTCGCTGGAAGGGCCTGGACGTTGGATCGGCGAGGTTTACCCGACCAGTCATTTTCTGACTATCGCCCGCGGGACGTTCTCGAAAGCGCTGGATCTGACTGATTTGTGGCAACTTTTTATCCCGTTACTGATAGCCATCCCGCTGGTGATGGGCTTAAGTATCCTGCTGCTGAAAAAACAGGAGGGATGA", + "dna_sequence_length": 2736, + "functions": [ + "ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein" + ], + "id": "CDS_3423", + "location": [ + [ + "NC_000913", + 3629538, + "-", + 2736 + ] + ], + "md5": "b275fc9b5ac49a948a1f7a4120752dfe", + "parent_gene": "", + "protein_md5": "132f1ca6f631dd106ff535914a7e7db0", + "protein_translation": "MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG", + "protein_translation_length": 911, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011385" + ], + [ + "gene_synonym", + "ECK3472" + ], + [ + "gene_synonym", + "EcoGene:EG12224" + ], + [ + "gene_synonym", + "GI:16131359" + ], + [ + "gene_synonym", + "GeneID:948003" + ], + [ + "gene_synonym", + "JW3454" + ], + [ + "gene_synonym", + "NP_417944.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37626" + ], + [ + "gene_synonym", + "b3487" + ], + [ + "gene_synonym", + "yhiI" + ] + ], + "dna_sequence": "ATGGATAAGAGTAAGCGCCATCTGGCGTGGTGGGTTGTCGGGTTACTGGCGGTGGCGGCTATCGTGGCGTGGTGGCTGTTGCGCCCGGCAGGTGTGCCGGAAGGCTTTGCTGTCAGTAATGGGCGCATTGAAGCGACGGAAGTGGATATTGCCAGCAAAATTGCCGGGCGTATCGACACCATTCTGGTGAAAGAAGGCAAGTTTGTTCGCGAAGGTGAAGTGCTGGCGAAGATGGATACTCGCGTGTTGCAGGAACAGCGACTGGAAGCCATCGCGCAAATCAAAGAGGCACAAAGCGCCGTTGCTGCCGCGCAGGCTTTGCTGGAGCAACGACAAAGCGAAACTCGTGCCGCACAGTCGCTGGTTAATCAACGCCAGGCAGAACTGGACTCCGTAGCAAAACGTCATACGCGTTCCCGTTCACTGGCCCAACGAGGGGCTATTTCTGCGCAACAGCTGGATGACGATCGCGCCGCCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCGGCTATAGAAGCGGCACGCACCAATATCATTCAGGCGCAAACCCGCGTCGAAGCGGCACAAGCCACTGAACGGCGCATTGCCGCAGATATCGATGACAGCGAACTGAAAGCCCCGCGTGACGGACGCGTGCAGTATCGGGTTGCCGAGCCAGGCGAAGTGCTGGCGGCAGGCGGTCGGGTGCTGAATATGGTCGATCTCAGCGACGTCTATATGACTTTCTTCCTGCCAACCGAACAGGCGGGCACGCTGAAACTGGGCGGTGAAGCCCGGCTGATCCTCGATGCCGCGCCAGATCTGCGTATTCCTGCAACCATCAGTTTTGTCGCCAGTGTCGCCCAGTTCACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAGGTTGCCGCAATGA", + "dna_sequence_length": 1068, + "functions": [ + "putative membrane fusion protein (MFP) of efflux pump" + ], + "id": "CDS_3424", + "location": [ + [ + "NC_000913", + 3630602, + "-", + 1068 + ] + ], + "md5": "537508ca7f4883420c2528de158dae2e", + "parent_gene": "", + "protein_md5": "82153059ab63f9337b8d2ec8e11a0775", + "protein_translation": "MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011387" + ], + [ + "gene_synonym", + "ECK3473" + ], + [ + "gene_synonym", + "EcoGene:EG12225" + ], + [ + "gene_synonym", + "GI:16131360" + ], + [ + "gene_synonym", + "GeneID:948001" + ], + [ + "gene_synonym", + "JW3455" + ], + [ + "gene_synonym", + "NP_417945.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37627" + ], + [ + "gene_synonym", + "b3488" + ], + [ + "gene_synonym", + "yhiJ" + ] + ], + "dna_sequence": "ATGAAAATTGGAACTGTGGCAGGCACTAACGACAGTACAACGACAATCGCAACAAATGATATGGTGCAAGAGCATGTTACCAACTTCACTAAAGAACTGTTTGGGTATATTGCAAATGGTATAGGTGATGATATATCAAGTATTGCCAGGACAATGCTCGGTGAGGTTGTGGAAAAAATAGATGATTGGCAAATAGAACGGTTCCAACAATCTATTCAAGATGACAAAATTTCATTTACCATACAAACGGATCATTCAGAAAAATATAGTATGCTATCGGGCATGCGTGCTCATATTCTACGTAGGAATAATAATTATCAGTTTATTGTGACAATTAATAGCAAAAATTACGGTTGCTCTCTTGATAATACCGATATTAATTGGTGCAGTATTGTTTATTTACTTAATAATATGACAGTAAATGATAATGCTAATGATGTTGCAGTTACTGAGTCGTACAAACCCATCTGGAACTGGAAAATATCGCAATATAATGTATCTGATATTAAATTCGAAACAATGATAAAACCCCAGTTCGCTGACAGAATCTATTTCTCCAATTGTTTACCCGTTGATCCCACAAGTACCAGACCAACCTATTTTGGTGATACCGATGGCTCAGTCGGTGCAGTTTTGTTCGCGCTTTTCGCAACGGGACATTTGGGAATCATGGCTGAAGGAGAAAATTTCCTTAGCCAGTTGCTTAATATAGAAGATGAAGTTCTCAACGTATTGCTAAGGGAGAACTTTAATGAGCAACTTAACACTAATGTTAATACAATAATCAGTATCCTGAACAGAAGAGACATTATTTTAGAAAGTCTTCAGCCTTATTTAGTTATTAATAAAGACGCTGTGACGCCATGTACGTTTCTGGGCGACCAAACCGGCGATCGATTTAGCAATATCTGTGGTGATCAATTTATCATCGATTTGTTAAAACGCATAATGAGTATCAATGAAAATGTTCATGTATTAGCTGGAAATCATGAAACGAATTGCAATGGTAACTATATGCAGAACTTCACGCGTATGAAACCACTCGATGAGGATACCTACTCTGGGATAAAAGATTATCCTGTATGTTTCTATGACCCCAAATACAAAATAATGGCAAATCATCATGGGATAACTTTTGATGATCAGCGAAAACGTTACATTATAGGACCGATAACAGTCTCTATTGATGAAATGACCAATGCTCTCGATCCGGTCGAATTAGCGGCAATTATCAATAAAAAGCATCATGCTATAATTAATGGCAAAAAGTTTAAAACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACATGCTGGAAGAATGTTCAGCATGCATAATTGCCAAATTAACCCTGGTGCAGGGCCTGAGATAACCACTCCCTGGAAGTCTTACCAGCATGAAAAAAACAGAAATGGACTTATGCCTTTGATTAGAAGGCGCACAATGTTACAGCTCTGA", + "dna_sequence_length": 1623, + "functions": [ + "DUF4049 family protein" + ], + "id": "CDS_3425", + "location": [ + [ + "NC_000913", + 3632590, + "-", + 1623 + ] + ], + "md5": "9a6d557c3d69dfef9b35bdf10361f0a0", + "parent_gene": "", + "protein_md5": "aaf88a9e5ade16162b329639890e0f17", + "protein_translation": "MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRNNNYQFIVTINSKNYGCSLDNTDINWCSIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETMIKPQFADRIYFSNCLPVDPTSTRPTYFGDTDGSVGAVLFALFATGHLGIMAEGENFLSQLLNIEDEVLNVLLRENFNEQLNTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYSGIKDYPVCFYDPKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIINGKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGETGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL", + "protein_translation_length": 540, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011391" + ], + [ + "gene_synonym", + "ASAP:ABE-0011393" + ], + [ + "gene_synonym", + "ECK3475" + ], + [ + "gene_synonym", + "EcoGene:EG12227" + ], + [ + "gene_synonym", + "GeneID:947999" + ], + [ + "gene_synonym", + "JW5674" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37629" + ], + [ + "gene_synonym", + "b4660" + ], + [ + "gene_synonym", + "yhiK" + ], + [ + "gene_synonym", + "yhiL" + ] + ], + "dna_sequence": "ATGAAAGCAATTGACAATCAGATTAGAAACATCTCTTCAAGCCATCAAGATAAGCATTCAGATAAAGTTAACAGTCATCAACACCATGGCAAGGTTGATAAAACACATCGTGCAAAGATAGTTGAATTTGATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAAGGTAAATGATCGTAGTCACCAGATGGAGAAAGTATGGTTTTATAATAGTGAACCTTCTATAGATATTCAAGAATATAATAGATTCGCCGACAATACTACTGATACGTTTATCTTTACAATTATACCAGACAATAACCATGTGTTAAAATTATCGTCTCCCATTACCGTTACTGTTGAGTGTAAGGGCGGTTATTATTTTATTAATTCCTCTGGAGATAAATCAGATATAATTTATAAAGTTGATGGGCTTTCTATCATAGCGAGAAATTTCTTTACTCTTCTTAGTGGTAATTTCAAACCTGACTGGCGTTGGGATGTCTCTAAAGAGACGTTTACTAAGGAAAAGTTTGATAGCTATGTTAAATCTGTGTTTTCAAAAATAGACTTCTATAAACAGTGTGGTGTGATTAACCCACAAAATGCCAACACGGCTTATTTTGGCGATACAGATGGAAGAGTAGGCGCTGTACTTTATGCATTGCTCGTTTCAGGGCATATAGGCATCAGGGAAAAGGGTTGGAGTTTATTATGTGAATTATTAAAACACGAAGAGATGGCTTCATCTGCATACAAACATAAAAATAATAAAGTGCTCTACGATTTATTAAATACGAGAGACATGATCTTGAATGAGTTGCATCAACATGTTTTTTTAAAGGACGATGCGATAACCCCTTGTATCTTCCTTGGGGATCATACAGGCGATAGATTTAGTACTATTTTTGGTGATAAATATATCCTTACTTTGCTAAATTCTATGCGAAATATGGAGGGTAATAAAGATAGCCGTATTAATAAAAATGTCGTCGTTCTGGCTGGAAATCATGAAATCAATTTTAATGGTAACTATACTGCACGACTAGCAAATCATAAACTCTCTGCCGGTGATACGTATAACTTAATTAAAACGCTCGATGTTTGTAATTATGACTCAGAAAGGCAAGTTTTAACCAGTCATCACGGAATAATAAGAGATGAAGAAAAAAAATGTTATTGTCTCGGTGCTTTGCAGGTTCCATTTAATCAGATGAAAAATCCTACTGATCCTGAGGAATTAGCCAATATTTTTAATAAAAAACATAAAGAACACATGGATGATCCTCTATTCCATCTAATCCGAAGCAATACTTTGAAACCCACACCTGTATATGCTAATTATTTTGATAACACTACTGATTTCAGACCAGCACGTGAACGTATCTTCATATGTGGGGAGACACTCAAAGGTGAAGACCCCAGCAAATACATTAGACAAAAATATGGGCATCATGGGCCCGGGGTAGATCATAATCAACAATTTGATAATGGTATTATGGGGCTAAATTCCCTGAAGGAAGCACGTGATAAAAATAATAAAATAATTTATTCCTCAGGGCTTAGTTGTTTTCAACTACATTAA", + "dna_sequence_length": 1608, + "id": "CDS_3426", + "location": [ + [ + "NC_000913", + 3634458, + "-", + 1194 + ], + [ + "NC_000913", + 3633265, + "-", + 414 + ] + ], + "md5": "ae0d3024e3bafa29991c62e9f528c66f", + "parent_gene": "", + "protein_md5": "653d7bb047457f4eb3cf6097384379c2", + "protein_translation": "MKAIDNQIRNISSSHQDKHSDKVNSHQHHGKVDKTHRAKIVEFDKLDNDSQIDNDFGLHIIYFLQHGHWKVNDRSHQMEKVWFYNSEPSIDIQEYNRFADNTTDTFIFTIIPDNNHVLKLSSPITVTVECKGGYYFINSSGDKSDIIYKVDGLSIIARNFFTLLSGNFKPDWRWDVSKETFTKEKFDSYVKSVFSKIDFYKQCGVINPQNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKNNKVLYDLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLKPTPVYANYFDNTTDFRPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIMGLNSLKEARDKNNKIIYSSGLSCFQLH", + "protein_translation_length": 535, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011400" + ], + [ + "gene_synonym", + "ECK3476" + ], + [ + "gene_synonym", + "EcoGene:EG12228" + ], + [ + "gene_synonym", + "GI:226524753" + ], + [ + "gene_synonym", + "GeneID:947997" + ], + [ + "gene_synonym", + "JW5944" + ], + [ + "gene_synonym", + "NP_417948.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37630" + ], + [ + "gene_synonym", + "b3491" + ], + [ + "gene_synonym", + "yhiM" + ] + ], + "dna_sequence": "GTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCATTAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTACGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCTGTCTAATTGGCCTTGTTGCCACAATTGTCCATCAAACACGTAATACGTTTTCAACTAAAGAACACTGGCTGTGGTGTTATTGGGTTATTTTTCTCGGCTCAATCACGGTACTGCAGGGGATATACGTCTTAGTCAGTTCCGATGCAAGCGCCCGACTGGCTCCCGGCATTATTCTTATTTGCCTCGGAATGATCTGTTACAGCATATTCTCAAAAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGCCTTTTCCTGGCATCGTTTCTTGCGGAAATGGCGCAGACCGACATGGGATATTTTATTCCTTCGCGAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAA", + "dna_sequence_length": 1053, + "functions": [ + "acid resistance protein, inner membrane" + ], + "id": "CDS_3427", + "location": [ + [ + "NC_000913", + 3634841, + "+", + 1053 + ] + ], + "md5": "5b717dff3f4ecb87175eeacdd02ced85", + "parent_gene": "", + "protein_md5": "060ec27a8983fb9df2fcb8faaf761b41", + "protein_translation": "MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLISLAAICLALFTTAFIIISQLTRGVNTFYNTLFPIIGYAGSIITMIWGWALLAGNDVMADEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLIAVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAPGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011402" + ], + [ + "gene_synonym", + "ECK3477" + ], + [ + "gene_synonym", + "EcoGene:EG12229" + ], + [ + "gene_synonym", + "GI:16131364" + ], + [ + "gene_synonym", + "GeneID:947996" + ], + [ + "gene_synonym", + "JW3459" + ], + [ + "gene_synonym", + "NP_417949.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37631" + ], + [ + "gene_synonym", + "b3492" + ], + [ + "gene_synonym", + "yhiN" + ] + ], + "dna_sequence": "GTGGAAAGGTTTGATGCCATTATTATAGGCGCTGGTGCGGCGGGTATGTTCTGTTCTGCGCTGGCAGGTCAGGCAGGACGCCGGGTTCTGCTGATCGATAATGGTAAAAAACCAGGGCGCAAAATCCTTATGTCTGGCGGTGGGCGCTGCAACTTTACCAACCTTTATGTCGAACCAGGCGCTTATCTGAGCCAGAATCCGCATTTTTGTAAGTCTGCACTCGCACGTTTTACCCAGTGGGATTTCATTGATCTGGTCAATAAACACGGCATCGCCTGGCACGAGAAAACGTTAGGGCAACTCTTCTGCGATGACTCCGCGCAGCAGATTGTCGACATGCTGGTGGATGAGTGCGAGAAGGGCAATGTGACCTTCAGATTGCGTAGCGAAGTGCTGAGTGTGGCGAAGGATGAAACAGGCTTCACGCTTGATCTGAACGGCATGACTGTCGGTTGCGAAAAGCTGGTCATCGCGACTGGTGGGCTGTCAATGCCGGGGCTGGGCGCGTCGCCGTTTGGTTATAAGATTGCCGAACAATTTGGCCTCAACGTGCTGCCGACCCGCGCGGGTCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTGGCGGGCGTGGCGGTGCCTTCCGTGATTACCGCTGAAAACGGCACCGTTTTCCGTGAGAACTTACTCTTCACCCACCGCGGCTTGTCTGGACCGGCGGTGTTGCAGATTTCAAGCTACTGGCAACCGGGGGAATTTGTCAGCATCAATCTGCTACCGGATGTGGACCTCGAAACCTTCCTGAATGAGCAGCGTAACGCACATCCGAATCAAAGCCTGAAAAACACACTGGCGGTTCATCTACCGAAGCGGTTGGTTGAACGCTTACAGCAACTCGGGCAAATCCCGGATGTTTCGCTAAAACAGCTCAACGTGCGTGACCAACAGGCACTGATTAGCACATTGACCGACTGGCGCGTACAACCCAACGGCACTGAAGGCTATCGCACTGCCGAAGTGACGCTCGGCGGCGTGGACACCAACGAACTCTCTTCACGGACGATGGAAGCGCGCAAAGTGCCTGGGCTGTACTTCATCGGCGAAGTGATGGACGTCACCGGCTGGCTGGGGGGCTATAACTTCCAGTGGGCGTGGTCGAGTGCGTGGGCTTGTGCGCAGGATTTGATTGCAGCAAAGTCGTCCTGA", + "dna_sequence_length": 1203, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_3428", + "location": [ + [ + "NC_000913", + 3637410, + "-", + 1203 + ] + ], + "md5": "c5c91d2f08ec65a08b3f42c31cafc742", + "parent_gene": "", + "protein_md5": "4540c32d5ff8d502bb271f3a96f8c5d5", + "protein_translation": "MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS", + "protein_translation_length": 400, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011407" + ], + [ + "gene_synonym", + "ECK3478" + ], + [ + "gene_synonym", + "EcoGene:EG12230" + ], + [ + "gene_synonym", + "GI:16131365" + ], + [ + "gene_synonym", + "GeneID:948009" + ], + [ + "gene_synonym", + "JW3460" + ], + [ + "gene_synonym", + "NP_417950.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ7" + ], + [ + "gene_synonym", + "b3493" + ], + [ + "gene_synonym", + "pit" + ], + [ + "gene_synonym", + "pitA" + ] + ], + "dna_sequence": "ATGCTACATTTGTTTGCTGGCCTGGATTTGCATACCGGGCTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGTATTCAACTTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGGCGGCGATTATCTGGAACCTGGGTACCTGGTACTTTGGTTTACCTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACAAGCTGTCGCTTGATCAACGTAGCCAGATGCGCCGCATTATGCTGTGCGTTTCTGACACTATCGACAAAGTGGTGAAGATGCCTGGCGTGAGTGCTGACGATCAGCGCCTGTTGAAGAAACTGAAGTCCGACATGCTTAGCACCATCGAGTATGCACCGGTGTGGATCATCATGGCGGTCGCGCTGGCGTTAGGTATCGGTACGATGATTGGCTGGCGCCGTGTGGCAACGACTATCGGTGAGAAAATCGGTAAGAAAGGCATGACCTACGCTCAGGGGATGTCTGCCCAGATGACGGCGGCAGTGTCTATCGGCCTGGCGAGTTATACCGGGATGCCGGTTTCCACTACTCACGTACTCTCCTCTTCTGTCGCGGGGACGATGGTGGTAGATGGTGGCGGCTTACAGCGTAAAACCGTGACCAGCATTCTGATGGCCTGGGTGTTTACCCTTCCGGCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAA", + "dna_sequence_length": 1500, + "functions": [ + "phosphate transporter, low-affinity", + "tellurite importer" + ], + "id": "CDS_3429", + "location": [ + [ + "NC_000913", + 3637642, + "+", + 1500 + ] + ], + "md5": "9361ece1680e0637b5909130c6764c2a", + "parent_gene": "", + "protein_md5": "14cfe6a3d3e68d767bd41c320f32a9b9", + "protein_translation": "MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL", + "protein_translation_length": 499, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011410" + ], + [ + "gene_synonym", + "ECK3479" + ], + [ + "gene_synonym", + "EcoGene:EG12231" + ], + [ + "gene_synonym", + "GI:16131366" + ], + [ + "gene_synonym", + "GeneID:948008" + ], + [ + "gene_synonym", + "JW3461" + ], + [ + "gene_synonym", + "NP_417951.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8S5" + ], + [ + "gene_synonym", + "b3494" + ], + [ + "gene_synonym", + "uspB" + ], + [ + "gene_synonym", + "yhiO" + ] + ], + "dna_sequence": "ATGATAAGCACCGTCGCATTATTTTGGGCTTTATGTGTCGTTTGCATTGTTAACATGGCGCGCTATTTCTCATCACTACGCGCGTTGTTAGTGGTACTGCGTAACTGCGATCCATTGCTCTATCAATATGTTGATGGAGGGGGCTTTTTTACCTCACATGGCCAACCCAACAAACAGGTGCGTCTCGTTTGGTATATCTATGCCCAACGTTATCGCGATCATCACGATGATGAATTTATTCGCCGCTGTGAGCGGGTGCGTCGGCAGTTTATTCTGACCAGCGCATTGTGTGGTCTGGTGGTGGTCAGCCTGATTGCATTGATGATTTGGCATTAA", + "dna_sequence_length": 336, + "functions": [ + "universal stress (ethanol tolerance) protein B" + ], + "id": "CDS_3430", + "location": [ + [ + "NC_000913", + 3639720, + "-", + 336 + ] + ], + "md5": "ec0719f1175f3664cd4623645bc5baff", + "parent_gene": "", + "protein_md5": "c2a2a507453813d4db15fd2112a4401d", + "protein_translation": "MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVVSLIALMIWH", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011414" + ], + [ + "gene_synonym", + "ECK3480" + ], + [ + "gene_synonym", + "EcoGene:EG11390" + ], + [ + "gene_synonym", + "GI:16131367" + ], + [ + "gene_synonym", + "GeneID:948007" + ], + [ + "gene_synonym", + "JW3462" + ], + [ + "gene_synonym", + "NP_417952.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AED0" + ], + [ + "gene_synonym", + "b3495" + ], + [ + "gene_synonym", + "uspA" + ] + ], + "dna_sequence": "ATGGCTTATAAACACATTCTCATCGCGGTCGACCTCTCCCCGGAAAGCAAAGTTCTGGTAGAGAAAGCAGTCTCTATGGCTCGCCCCTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATCAAGAAATACGATATGGATTTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCACGTCAGCTGATCAACACCGTTCACGTTGATATGCTGATTGTTCCGCTGCGCGACGAAGAAGAATAA", + "dna_sequence_length": 435, + "functions": [ + "universal stress global response regulator" + ], + "id": "CDS_3431", + "location": [ + [ + "NC_000913", + 3640111, + "+", + 435 + ] + ], + "md5": "508f777f8dbce9851a47bbe7d9eecffa", + "parent_gene": "", + "protein_md5": "5c3e9984919757f7cc69deb288ba224a", + "protein_translation": "MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011417" + ], + [ + "gene_synonym", + "ECK3481" + ], + [ + "gene_synonym", + "EcoGene:EG12232" + ], + [ + "gene_synonym", + "GI:16131368" + ], + [ + "gene_synonym", + "GeneID:948006" + ], + [ + "gene_synonym", + "JW3463" + ], + [ + "gene_synonym", + "NP_417953.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36837" + ], + [ + "gene_synonym", + "b3496" + ], + [ + "gene_synonym", + "dtpB" + ], + [ + "gene_synonym", + "yhiP" + ] + ], + "dna_sequence": "ATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTACTTCATGACCGGCATGTCGCTACTTAAGCCTGACCTGATTTTCATCGCCCTGGGGACTATCGCTGTCGGTAACGGCCTGTTTAAAGCTAACCCAGCCAGCTTGCTTTCGAAGTGCTATCCGCCGAAAGATCCGCGGCTTGATGGCGCATTCACCCTGTTCTATATGTCGATCAACATCGGCTCGTTGATAGCGTTATCGCTGGCCCCTGTGATCGCTGATAGATTCGGTTATTCAGTCACCTACAACCTGTGCGGGGCGGGGTTAATTATCGCATTACTGGTTTACATCGCCTGTCGTGGAATGGTGAAAGACATTGGTTCTGAACCCGACTTCCGGCCAATGAGCTTCAGCAAACTGTTGTACGTGTTACTTGGCAGCGTGGTGATGATCTTCGTATGCGCATGGCTGATGCACAACGTAGAAGTCGCCAATCTGGTGCTGATTGTTCTCTCCATCGTCGTCACCATCATCTTCTTTCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCTCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGCTTCCAGGCGCTTAACCCGTTCTGGGTGGTACTCGCCAGCCCAATACTGGCAGGCATTTACACGCATCTGGGTAACAAAGGCAAAGACCTCTCGATGCCGATGAAATTTACTCTCGGCATGTTTATGTGCTCACTGGGCTTTTTGACGGCGGCAGCTGCGGGAATGTGGTTTGCGGATGCACAAGGGCTGACATCGCCATGGTTTATCGTGCTGGTGTACTTATTCCAGAGCTTAGGTGAACTGTTTATTAGCGCCCTTGGCCTGGCGATGATTGCTGCCCTGGTGCCGCAGCATTTGATGGGCTTTATTCTCGGGATGTGGTTCCTGACGCAGGCTGCCGCGTTCTTGCTGGGCGGCTATGTGGCAACATTTACCGCGGTGCCGGACAACATTACCGATCCGCTTGAGACGTTGCCCGTCTATACCAACGTGTTTGGTAAGATTGGTCTGGTCACGCTGGGCGTTGCAGTAGTGATGCTGTTGATGGTGCCGTGGCTGAAACGCATGATTGCGACGCCGGAAAGCCATTAA", + "dna_sequence_length": 1470, + "functions": [ + "dipeptide and tripeptide permease B" + ], + "id": "CDS_3432", + "location": [ + [ + "NC_000913", + 3640862, + "+", + 1470 + ] + ], + "md5": "56841cac3d7df65d7f262843727624fa", + "parent_gene": "", + "protein_md5": "d21f567ec6a15c020f7adcc23a64e978", + "protein_translation": "MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIALSLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH", + "protein_translation_length": 489, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011419" + ], + [ + "gene_synonym", + "ECK3482" + ], + [ + "gene_synonym", + "EcoGene:EG12233" + ], + [ + "gene_synonym", + "GI:16131369" + ], + [ + "gene_synonym", + "GeneID:948005" + ], + [ + "gene_synonym", + "JW5672" + ], + [ + "gene_synonym", + "NP_417954.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68567" + ], + [ + "gene_synonym", + "b3497" + ], + [ + "gene_synonym", + "rsmJ" + ], + [ + "gene_synonym", + "yhiQ" + ] + ], + "dna_sequence": "GTGAAAATCTGCTTAATTGATGAAACAGGCACCGGAGACGGTGCCTTATCTGTTCTGGCGGCCCGCTGGGGGCTGGAGCACGATGAAGACAACCTGATGGCGCTGGTGTTAACGCCGGAACATCTGGAATTGCGCAAGCGTGATGAGCCAAAACTTGGCGGCATCTTTGTTGATTTTGTTGGCGGAGCGATGGCGCACCGACGCAAATTCGGCGGTGGTCGCGGTGAGGCGGTGGCGAAAGCGGTGGGCATTAAAGGCGATTATTTGCCGGATGTGGTGGATGCCACTGCAGGACTTGGGCGCGATGCCTTTGTACTGGCTTCAGTCGGCTGCCGCGTGCGGATGCTGGAGCGTAATCCAGTGGTTGCCGCGCTACTCGACGACGGCCTGGCGCGTGGTTATGCGGATGCGGAAATCGGCGGCTGGTTGCAGGAGCGGTTGCAGTTAATTCACGCCTCCAGCCTGACGGCGCTGACTGATATTACCCCGCGCCCGCAGGTGGTTTATCTCGACCCGATGTTCCCGCATAAGCAGAAAAGCGCGCTAGTGAAAAAAGAGATGCGTGTCTTTCAGTCGCTGGTGGGACCGGATCTTGATGCCGATGGATTACTGGAGCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA", + "dna_sequence_length": 753, + "functions": [ + "16S rRNA m(2)G1516 methyltransferase, SAM-dependent" + ], + "id": "CDS_3433", + "location": [ + [ + "NC_000913", + 3643132, + "-", + 753 + ] + ], + "md5": "316c9a07b0e57568b6a725414a03ca69", + "parent_gene": "", + "protein_md5": "9d09691ceae35d2290c48298e959323d", + "protein_translation": "MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011421" + ], + [ + "gene_synonym", + "ECK3483" + ], + [ + "gene_synonym", + "EcoGene:EG11441" + ], + [ + "gene_synonym", + "GI:16131370" + ], + [ + "gene_synonym", + "GeneID:948016" + ], + [ + "gene_synonym", + "JW3465" + ], + [ + "gene_synonym", + "NP_417955.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27298" + ], + [ + "gene_synonym", + "b3498" + ], + [ + "gene_synonym", + "opdA" + ], + [ + "gene_synonym", + "prlC" + ] + ], + "dna_sequence": "ATGACGAATCCGTTACTGACTCCCTTTGAATTGCCTCCGTTTTCTAAAATTCTCCCGGAACATGTCGTTCCAGCCGTGACTAAGGCATTGAACGACTGCCGCGAAAACGTGGAGCGCGTAGTAGCGCAAGGGGCACCGTACACCTGGGAAAATCTCTGCCAGCCGCTGGCGGAAGTGGACGATGTGTTGGGGCGTATCTTCTCCCCGGTCAGCCACCTGAACTCGGTGAAAAATAGCCCGGAACTGCGTGAAGCCTACGAACAAACCCTGCCGCTGCTGTCGGAATACAGCACCTGGGTAGGGCAACATGAAGGGCTGTATAAAGCGTATCGCGACCTGCGCGATGGCGATCATTACGCCACGCTGAACACGGCGCAGAAGAAAGCGGTTGATAACGCACTGCGCGACTTTGAACTCTCTGGCATAGGTCTGCCGAAAGAGAAACAGCAGCGTTACGGCGAAATTGCGACCCGTCTTTCTGAACTGGGCAACCAGTACAGCAACAACGTCCTCGATGCGACAATGGGCTGGACCAAACTCGTTACCGACGAAGCGGAGCTGGCGGGGATGCCAGAAAGCGCGCTGGCTGCGGCAAAAGCCCAGGCCGAAGCGAAAGAGCTGGAAGGTTATTTGCTGACGCTGGATATCCCAAGCTACTTGCCGGTAATGACCTACTGCGACAACCAGGCTCTGCGTGAAGAGATGTATCGCGCTTACAGCACCCGCGCCTCCGATCAAGGCCCAAACGCCGGTAAATGGGATAACAGCAAGGTGATGGAAGAGATCCTCGCGCTGCGTCACGAACTGGCGCAACTGCTGGGCTTTGAAAACTACGCCTTTAAATCCCTTGCCACTAAAATGGCAGAAAACCCGCAGCAGGTGCTGGATTTCTTAACCGATCTGGCAAAACGCGCGCGTCCACAAGGCGAAAAAGAGCTGGCGCAATTGCGTGCCTTTGCCAAAGCCGAATTTGGCGTCGATGAGTTGCAGCCGTGGGATATCGCTTACTACAGCGAAAAACAAAAACAGCACCTCTACAGCATCAGTGACGAACAGCTGCGTCCGTACTTCCCGGAAAACAAAGCGGTTAACGGCCTGTTTGAAGTGGTTAAGCGTATTTACGGCATCACCGCTAAAGAGCGTAAAGATGTTGATGTCTGGCATCCGGATGTACGTTTCTTCGAACTGTATGACGAAAATAACGAACTGCGCGGTAGCTTCTACCTCGATCTGTATGCCCGTGAAAACAAGCGCGGCGGGGCGTGGATGGATGACTGCGTAGGCCAGATGCGTAAAGCTGATGGTTCTTTGCAAAAACCGGTCGCGTATTTGACTTGTAACTTCAACCGCCCGGTAAATGGTAAACCGGCGCTGTTCACTCACGACGAAGTGATCACCCTCTTCCACGAGTTCGGTCACGGCCTGCACCATATGCTGACCCGCATCGAAACCGCTGGTGTTTCCGGTATCAGCGGTGTGCCGTGGGATGCGGTCGAACTGCCGAGTCAGTTTATGGAAAACTGGTGCTGGGAGCCGGAGGCGCTGGCGTTTATCTCTGGTCACTATGAAACCGGCGAACCGCTGCCGAAAGAGTTGCTGGATAAAATGCTGGCGGCGAAGAACTACCAGGCGGCGCTGTTTATTCTGCGTCAGCTGGAGTTCGGCCTGTTTGATTTCCGCCTTCATGCCGAGTTCCGCCCGGATCAGGGGGCAAAAATCCTCGAAACTCTGGCAGAAATCAAGAAACTGGTTGCCGTGGTGCCATCTCCGTCCTGGGGCCGTTTCCCGCACGCTTTCAGCCATATTTTCGCCGGTGGTTATGCCGCAGGTTACTACAGCTACCTGTGGGCTGACGTACTGGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGACAACATTCTGAGCCGTGGCGGTTCAGAAGAGCCGATGGATCTGTTCAAACGCTTCCGTGGTCGTGAACCGCAGCTGGATGCGATGCTGGAGCATTACGGCATTAAGGGCTGA", + "dna_sequence_length": 2043, + "functions": [ + "oligopeptidase A" + ], + "id": "CDS_3434", + "location": [ + [ + "NC_000913", + 3645182, + "-", + 2043 + ] + ], + "md5": "260c409e7998cf9833311151d64495fd", + "parent_gene": "", + "protein_md5": "5a887edb44abee1a78c5115a9fa91f79", + "protein_translation": "MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG", + "protein_translation_length": 680, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011428" + ], + [ + "gene_synonym", + "ECK3484" + ], + [ + "gene_synonym", + "EcoGene:EG12234" + ], + [ + "gene_synonym", + "GI:16131371" + ], + [ + "gene_synonym", + "GeneID:948012" + ], + [ + "gene_synonym", + "JW3466" + ], + [ + "gene_synonym", + "NP_417956.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37634" + ], + [ + "gene_synonym", + "b3499" + ], + [ + "gene_synonym", + "rlmJ" + ], + [ + "gene_synonym", + "yhiR" + ] + ], + "dna_sequence": "ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATCATCGAGTCGCTGAAAGAGAAAGATAAACCGTTTCTCTATCTCGACACCCACGCAGGGGCCGGGCGTTATCAGTTAGGCAGCGAACATGCCGAGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCGTACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGCCTGCTACTGCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGGTTTCCAGCAGCTTAAGGCCAAACTGCCGCCGGTTTCCCGCCGTGGTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATTAAGCGCATGATCCACGATCTGGAAGCGACCGGTATTCGCAAAATTCTGCAAATTGAACTGGCGGTACTGCCAGACAGCGATCGCCGTGGCATGACCGCTTCCGGCATGATTGTGATTAACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAA", + "dna_sequence_length": 843, + "functions": [ + "23S rRNA m(6)A2030 methyltransferase, SAM-dependent" + ], + "id": "CDS_3435", + "location": [ + [ + "NC_000913", + 3645385, + "+", + 843 + ] + ], + "md5": "2ca8f7677ea091a9d41701abb2c81896", + "parent_gene": "", + "protein_md5": "84a56d8720671ad41ff950ee3ffc42e6", + "protein_translation": "MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011432" + ], + [ + "gene_synonym", + "ECK3485" + ], + [ + "gene_synonym", + "EcoGene:EG10412" + ], + [ + "gene_synonym", + "GI:16131372" + ], + [ + "gene_synonym", + "GeneID:948014" + ], + [ + "gene_synonym", + "JW3467" + ], + [ + "gene_synonym", + "NP_417957.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06715" + ], + [ + "gene_synonym", + "b3500" + ], + [ + "gene_synonym", + "gor" + ], + [ + "gene_synonym", + "gorA" + ] + ], + "dna_sequence": "ATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGTATTTACGCGGTGGGCGATAACACGGGTGCAGTGGAGCTGACACCGGTGGCAGTTGCAGCGGGTCGCCGTCTCTCTGAACGCCTGTTTAATAACAAGCCGGATGAGCATCTGGATTACAGCAACATTCCGACCGTGGTCTTCAGCCATCCGCCGATTGGTACTGTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAA", + "dna_sequence_length": 1353, + "functions": [ + "glutathione oxidoreductase" + ], + "id": "CDS_3436", + "location": [ + [ + "NC_000913", + 3646299, + "+", + 1353 + ] + ], + "md5": "19cb6208cc69855bc675047db5f33cb5", + "parent_gene": "", + "protein_md5": "89ded29143484f8dbe4356e42b9311d0", + "protein_translation": "MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4422" + ], + [ + "gene_synonym", + "EcoGene:EG14431" + ], + [ + "gene_synonym", + "GI:635341466" + ], + [ + "gene_synonym", + "GeneID:5061522" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A624" + ], + [ + "gene_synonym", + "YP_001165328.2" + ], + [ + "gene_synonym", + "b4613" + ], + [ + "gene_synonym", + "dinQ" + ] + ], + "dna_sequence": "GTGATTGATAAAGCAATCATCGTTCTAGGGGCGTTAATTGCGCTGCTGGAACTGATCCGCTTTCTGCTTCAGCTTCTGAACTGA", + "dna_sequence_length": 84, + "functions": [ + "UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system" + ], + "id": "CDS_3437", + "location": [ + [ + "NC_000913", + 3647788, + "-", + 84 + ] + ], + "md5": "ffaaaf77873c183f6a1d5a1f13ceb8ae", + "parent_gene": "", + "protein_md5": "c6655d86ee13e6d8fd2bd0b0b54aef9d", + "protein_translation": "MIDKAIIVLGALIALLELIRFLLQLLN", + "protein_translation_length": 27, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011435" + ], + [ + "gene_synonym", + "ECK3486" + ], + [ + "gene_synonym", + "EcoGene:EG12235" + ], + [ + "gene_synonym", + "GI:16131373" + ], + [ + "gene_synonym", + "GeneID:948013" + ], + [ + "gene_synonym", + "JW3468" + ], + [ + "gene_synonym", + "NP_417958.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37309" + ], + [ + "gene_synonym", + "arsE" + ], + [ + "gene_synonym", + "arsR" + ], + [ + "gene_synonym", + "b3501" + ] + ], + "dna_sequence": "ATGTCATTTCTGTTACCCATCCAATTGTTCAAAATTCTTGCTGATGAAACCCGTCTGGGCATCGTTTTACTGCTCAGCGAACTGGGAGAGTTATGCGTCTGCGATCTCTGCACTGCTCTCGACCAGTCGCAGCCCAAGATCTCCCGCCACCTGGCATTGCTGCGTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAA", + "dna_sequence_length": 354, + "functions": [ + "arsenical resistance operon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_3438", + "location": [ + [ + "NC_000913", + 3648528, + "+", + 354 + ] + ], + "md5": "d68b457349c1336f485c57ccadb55966", + "parent_gene": "", + "protein_md5": "5476ba71ab630fd81d8d88f6bc00a531", + "protein_translation": "MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRNLARQNCSGDSKNICS", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011437" + ], + [ + "gene_synonym", + "ECK3487" + ], + [ + "gene_synonym", + "EcoGene:EG12236" + ], + [ + "gene_synonym", + "GI:90111602" + ], + [ + "gene_synonym", + "GeneID:948011" + ], + [ + "gene_synonym", + "JW3469" + ], + [ + "gene_synonym", + "NP_417959.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB93" + ], + [ + "gene_synonym", + "arsB" + ], + [ + "gene_synonym", + "arsF" + ], + [ + "gene_synonym", + "b3502" + ] + ], + "dna_sequence": "ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTGATATTCCGGTGGTGTGGAATATCGTCTGGAACGCGACGGCTGCGTTTATCGCCGTCATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCGCTGCACGTCTCACGCTGGGGTAATGGTCGTGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGCCCTGTTTGCCAATGATGGCGCGGCGCTTATTTTGACACCGATTGTCATCGCCATGCTGCTGGCTTTAGGGTTCAGTAAAGGCACTACGCTGGCGTTCGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACCTGGTGAATATCGTTTCCGCTGATTTCTTTGGCCTCGGCTTTCGCGAATACGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGATTGTTGCCACGCTGGTGATGTTACATCTCTATTTTCGCAAAGATATTCCGCAGAACTACGATATGGCGCTGCTGAAATCTCCCGCAGAAGCGATCAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTCCTGGAACCGCTCGGCATTCCGGTGAGCGCCATTGCAGCTGTGGGCGCGCTGATATTATTTGTCGTCGCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAATGTGATTGGCTGCGATTTGGGACCGAAAATTACCCCAATTGGTAGCCTGGCTACGCTACTCTGGCTGCACGTACTTTCGCAGAAGAATATGACTATCAGCTGGGGATATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTTCACTTTGTAA", + "dna_sequence_length": 1290, + "functions": [ + "arsenite/antimonite transporter" + ], + "id": "CDS_3439", + "location": [ + [ + "NC_000913", + 3648935, + "+", + 1290 + ] + ], + "md5": "590d922f86e2921e4f8262134060367a", + "parent_gene": "", + "protein_md5": "e0c8c878f166338d72ff6cbc60ef55cb", + "protein_translation": "MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011439" + ], + [ + "gene_synonym", + "ECK3488" + ], + [ + "gene_synonym", + "EcoGene:EG12237" + ], + [ + "gene_synonym", + "GI:16131375" + ], + [ + "gene_synonym", + "GeneID:948018" + ], + [ + "gene_synonym", + "JW3470" + ], + [ + "gene_synonym", + "NP_417960.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB96" + ], + [ + "gene_synonym", + "arsC" + ], + [ + "gene_synonym", + "arsG" + ], + [ + "gene_synonym", + "b3503" + ] + ], + "dna_sequence": "ATGAGCAACATTACCATTTATCACAACCCGGCCTGCGGCACGTCGCGTAATACGCTGGAGATGATCCGCAACAGCGGCACAGAACCGACTATTATCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCTGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCAGCACCCGATTCTGATTAATCGCCCGATTGTGGTGACGCCGCTGGGAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAA", + "dna_sequence_length": 426, + "functions": [ + "arsenate reductase" + ], + "id": "CDS_3440", + "location": [ + [ + "NC_000913", + 3650237, + "+", + 426 + ] + ], + "md5": "8710eb2ef46ea7771918edff7e67d853", + "parent_gene": "", + "protein_md5": "3b0fb4d862f55919da7d85a871902311", + "protein_translation": "MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011443" + ], + [ + "gene_synonym", + "ECK3489" + ], + [ + "gene_synonym", + "EcoGene:EG12238" + ], + [ + "gene_synonym", + "GeneID:948017" + ], + [ + "gene_synonym", + "JW3471" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37635" + ], + [ + "gene_synonym", + "b3504" + ], + [ + "gene_synonym", + "yhiS" + ] + ], + "dna_sequence": "ATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAGGATATATCTCTGATCAATATGATTTAGCGCAACACCAACTTCAACAAATTAATGCGTGCCACACGAACACTACATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTAACCTTGTCAAGGTTTTATTTCGAAGATCTACTTAATATAAATTTCACTGACGCAAATTTAGGTGACACTATTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGCGGAAATTGCTTCGACAATAATTAAATTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAATGTCACACACGCCTTATTTAAAGAGGCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAA", + "dna_sequence_length": 1224, + "id": "CDS_3441", + "location": [ + [ + "NC_000913", + 3651291, + "+", + 741 + ], + [ + "NC_000913", + 3653231, + "+", + 483 + ] + ], + "md5": "a99182368a0636384ee9e8c39d93c07c", + "parent_gene": "", + "protein_md5": "6fedb4f136c0de8802b0b833b46fbf4f", + "protein_translation": "MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGDTIFLHKEHPTPKLYKDGQYLDKQIEGLFSTLLTINDNLLRAKAEIASTIIKFLEARITNLSYNDILKYQQEFQRQCYKQVKAFTTLSRYNKIQTWAEMSEYQFEVFQYETLNPKKMSHTPYLKRPLPNEKDINYGVEIEIPSGKRIRLSNHYQNIIP", + "protein_translation_length": 407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011446" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16131377" + ], + [ + "gene_synonym", + "GeneID:948015" + ], + [ + "gene_synonym", + "NP_417962.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE58" + ], + [ + "gene_synonym", + "b3505" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", + "dna_sequence_length": 1017, + "functions": [ + "IS5 transposase and trans-activator" + ], + "id": "CDS_3442", + "location": [ + [ + "NC_000913", + 3653198, + "-", + 1017 + ] + ], + "md5": "59571096a52db4971db033e04651ef59", + "parent_gene": "", + "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", + "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011451" + ], + [ + "gene_synonym", + "ECK3490" + ], + [ + "gene_synonym", + "EcoGene:EG11890" + ], + [ + "gene_synonym", + "GI:90111603" + ], + [ + "gene_synonym", + "GeneID:948022" + ], + [ + "gene_synonym", + "JW3474" + ], + [ + "gene_synonym", + "NP_417963.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37194" + ], + [ + "gene_synonym", + "b3506" + ], + [ + "gene_synonym", + "slp" + ] + ], + "dna_sequence": "ATGAACATGACAAAAGGTGCACTCATCCTCAGCCTTTCATTTTTGCTTGCCGCATGTAGTTCAATTCCGCAAAATATCAAAGGCAATAACCAACCTGATATTCAAAAAAGTTTTGTTGCTGTTCATAACCAGCCGGGGTTATATGTTGGTCAACAAGCGCGCTTTGGTGGGAAGGTTATCAACGTTATCAATGGCAAAACGGATACGTTGTTAGAAATCTCTGTATTACCGTTGGATAGCTATGCGAAGCCTGATATTGAAGCCAACTATCAGGGCCGACTGCTCGCCAGACAAAGCGGCTTCCTTGATCCAGTGAACTATCGTAATCACTTTGTTACCATCCTCGGCACCATTCAGGGTGAACAACCTGGCTTTATCAATAAAGTCCCGTATAACTTCCTGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGATTACGGCTATGGTGCATTCTGGCCGGAACCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAA", + "dna_sequence_length": 567, + "functions": [ + "outer membrane lipoprotein" + ], + "id": "CDS_3443", + "location": [ + [ + "NC_000913", + 3653961, + "+", + 567 + ] + ], + "md5": "53411361fa2112f127a8c2334a9a0ecc", + "parent_gene": "", + "protein_md5": "a195423a3a12493155dafa2d60d0a3ab", + "protein_translation": "MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVINVINGKTDTLLEISVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVSQVTPELVK", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011454" + ], + [ + "gene_synonym", + "ECK3491" + ], + [ + "gene_synonym", + "EcoGene:EG11889" + ], + [ + "gene_synonym", + "GI:16131379" + ], + [ + "gene_synonym", + "GeneID:948021" + ], + [ + "gene_synonym", + "JW3475" + ], + [ + "gene_synonym", + "NP_417964.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37195" + ], + [ + "gene_synonym", + "b3507" + ], + [ + "gene_synonym", + "dctR" + ], + [ + "gene_synonym", + "yhiF" + ] + ], + "dna_sequence": "ATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTGAGTAAAGGTAATGTCGTTCATATACAGAACGAAGAAGAGATCGACGTAATGTTGCATCAGAATGCCTTCGTCATTATTGATACATTAATGAATAATGTATTTCATTCTAATTTTCTCACTCAAATTGAACGATTAAAACCTGTCCATGTCATTATTTTCTCCCCCTTTAATATTAAACGCTGCCTGGGGAAAGTGCCGGTGACCTTTGTTCCGCGGACTATCACTATCATTGATTTTGTCGCACTCATCAATGGCAGTTACTGCTCTGTGCCTGAAGCGGCTGTGTCACTTTCGCGCAAGCAACATCAGGTTCTGAGCTGCATTGCGAATCAAATGACAACGGAAGATATTCTGGAGAAACTGAAAATATCGCTAAAAACGTTCTACTGCCATAAACACAATATCATGATGATCCTCAATCTTAAGCGGATCAATGAGCTGGTACGCCATCAGCATATTGATTATCTGGTGTGA", + "dna_sequence_length": 531, + "functions": [ + "Putative LuxR family repressor for dicarboxylate transport" + ], + "id": "CDS_3444", + "location": [ + [ + "NC_000913", + 3654683, + "+", + 531 + ] + ], + "md5": "60b69e2db7f852d0ff29ff51d53a3621", + "parent_gene": "", + "protein_md5": "789c1488e68dfefde0f2caf41c3e34bd", + "protein_translation": "MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011456" + ], + [ + "gene_synonym", + "ECK3492" + ], + [ + "gene_synonym", + "EcoGene:EG11400" + ], + [ + "gene_synonym", + "GI:16131380" + ], + [ + "gene_synonym", + "GeneID:948019" + ], + [ + "gene_synonym", + "JW5670" + ], + [ + "gene_synonym", + "NP_417965.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFV2" + ], + [ + "gene_synonym", + "b3508" + ], + [ + "gene_synonym", + "yhhE" + ], + [ + "gene_synonym", + "yhiD" + ] + ], + "dna_sequence": "ATGACAGCAGAATTTATTATACGTCTTATACTCGCGGCAATTGCCTGTGGCGCTATTGGCATGGAAAGGCAAATGCGCGGCAAAGGAGCAGGGTTACGCACACATGTATTAATTGGCATGGGAAGCGCCCTGTTTATGATTGTTTCGAAATATGGTTTTGCTGACGTGCTGTCTTTAGATCACGTCGGACTCGACCCCAGCCGTATTGCTGCTCAGGTGGTGACGGGCGTCGGGTTTATCGGTGCAGGTAACATTCTCGTTCGTAACCAAAATATTGTAGGTCTGACGACGGCAGCGGATATCTGGGTGACCGCCGCCATAGGTATGGTTATTGGCAGCGGTATGTACGAACTGGGTATTTATGGTTCAGTGATGACCTTGTTGGTGCTGGAAGTCTTCCATCAATTAACCTTCCGCCTGATGAACAAAAATTACCATTTACAGCTGACATTAGTGAACGGTAATACGGTATCAATGCTCGACTGGTTTAAGCAGCAAAAAATAAAAACTGATTTAGTTTCGTTGCAGGAAAATGAAGATCATGAAGTGGTCGCCATTGATATCCAGCTTCATGCCACAACGTCGATAGAAGACCTGTTGCGATTATTAAAAGGTATGGCAGGGGTGAAAGGCGTTTCAATTAGCTAA", + "dna_sequence_length": 648, + "functions": [ + "putative Mg(2+) transport ATPase, inner membrane protein" + ], + "id": "CDS_3445", + "location": [ + [ + "NC_000913", + 3655902, + "-", + 648 + ] + ], + "md5": "be2da3ad494f8f909ef4f92a77526588", + "parent_gene": "", + "protein_md5": "61db44ead7d92cfa989ac478e06fc1d5", + "protein_translation": "MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011458" + ], + [ + "gene_synonym", + "ECK3493" + ], + [ + "gene_synonym", + "EcoGene:EG11399" + ], + [ + "gene_synonym", + "GI:162135912" + ], + [ + "gene_synonym", + "GeneID:948026" + ], + [ + "gene_synonym", + "JW5669" + ], + [ + "gene_synonym", + "NP_417966.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AET2" + ], + [ + "gene_synonym", + "b3509" + ], + [ + "gene_synonym", + "hdeB" + ], + [ + "gene_synonym", + "yhhD" + ], + [ + "gene_synonym", + "yhiC" + ] + ], + "dna_sequence": "ATGAATATTTCATCTCTCCGTAAAGCGTTTATTTTTATGGGCGCTGTAGCGGCTTTGTCACTGGTGAACGCACAATCTGCGTTGGCAGCCAATGAATCCGCTAAAGATATGACCTGCCAGGAATTTATTGATCTGAATCCAAAAGCAATGACCCCGGTTGCATGGTGGATGCTGCATGAAGAAACAGTATATAAAGGTGGCGATACCGTTACTTTAAATGAAACCGATCTCACTCAAATTCCTAAAGTGATCGAATACTGTAAGAAAAACCCGCAGAAAAATTTGTATACCTTCAAAAATCAAGCATCTAATGACTTGCCGAATTAA", + "dna_sequence_length": 327, + "functions": [ + "acid-resistance protein" + ], + "id": "CDS_3446", + "location": [ + [ + "NC_000913", + 3656292, + "-", + 327 + ] + ], + "md5": "26b7e6f969840011d4ebae553f30286c", + "parent_gene": "", + "protein_md5": "d2a66d40466d5cd7424eb1c172bed1e1", + "protein_translation": "MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011464" + ], + [ + "gene_synonym", + "ECK3494" + ], + [ + "gene_synonym", + "EcoGene:EG11398" + ], + [ + "gene_synonym", + "GI:16131382" + ], + [ + "gene_synonym", + "GeneID:948025" + ], + [ + "gene_synonym", + "JW3478" + ], + [ + "gene_synonym", + "NP_417967.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES9" + ], + [ + "gene_synonym", + "b3510" + ], + [ + "gene_synonym", + "hdeA" + ], + [ + "gene_synonym", + "yhhC" + ], + [ + "gene_synonym", + "yhiB" + ] + ], + "dna_sequence": "ATGAAAAAAGTATTAGGCGTTATTCTTGGTGGTCTGCTTCTTCTGCCAGTTGTGAGCAATGCAGCGGATGCGCAAAAAGCAGCTGATAACAAAAAACCGGTCAACTCCTGGACCTGTGAAGATTTCCTGGCTGTGGACGAATCCTTCCAGCCAACTGCAGTTGGTTTTGCTGAAGCGCTGAACAACAAAGATAAACCAGAAGATGCGGTTTTAGATGTTCAGGGTATTGCAACCGTAACCCCAGCTATCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAA", + "dna_sequence_length": 333, + "functions": [ + "stress response protein acid-resistance protein" + ], + "id": "CDS_3447", + "location": [ + [ + "NC_000913", + 3656740, + "-", + 333 + ] + ], + "md5": "475e1e4ff8374ebd65fd9e05843b9eb7", + "parent_gene": "", + "protein_md5": "3ebfa9baa4ef7004cb2d24c105fbd7db", + "protein_translation": "MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011467" + ], + [ + "gene_synonym", + "ECK3495" + ], + [ + "gene_synonym", + "EcoGene:EG11495" + ], + [ + "gene_synonym", + "GI:16131383" + ], + [ + "gene_synonym", + "GeneID:948024" + ], + [ + "gene_synonym", + "JW3479" + ], + [ + "gene_synonym", + "NP_417968.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AET5" + ], + [ + "gene_synonym", + "b3511" + ], + [ + "gene_synonym", + "hdeD" + ], + [ + "gene_synonym", + "yhiA" + ] + ], + "dna_sequence": "ATGTTATATATAGATAAGGCAACAATTTTGAAGTTTGATCTGGAGATGCTTAAAAAACATCGCAGAGCAATCCAGTTTATTGCCGTGCTGCTGTTTATCGTCGGGTTGCTGTGTATCAGTTTCCCGTTCGTCTCTGGCGATATTTTAAGCACAGTAGTGGGTGCATTATTAATCTGCTCGGGTATTGCGCTTATTGTCGGGTTATTCAGCAACCGCAGTCATAATTTCTGGCCGGTATTATCCGGTTTCCTCGTCGCAGTCGCCTATTTATTGATCGGCTATTTCTTCATCCGCGCACCGGAGCTGGGCATTTTTGCCATTGCGGCATTTATTGCCGGTTTGTTCTGTGTTGCAGGGGTTATTCGCCTGATGAGTTGGTATCGTCAGCGTTCAATGAAAGGCAGCTGGCTACAGCTCGTTATTGGTGTGCTGGATATCGTCATTGCCTGGATATTCCTTGGTGCAACGCCGATGGTGTCTGTAACGCTGGTTTCCACACTGGTGGGAATTGAACTGATATTTAGCGCCGCCAGCCTGTTCAGCTTCGCCAGTTTGTTCGTTAAGCAGCAATAA", + "dna_sequence_length": 573, + "functions": [ + "acid-resistance membrane protein" + ], + "id": "CDS_3448", + "location": [ + [ + "NC_000913", + 3656995, + "+", + 573 + ] + ], + "md5": "7a077e5f1fe83ba4bf55f38937655bee", + "parent_gene": "", + "protein_md5": "67a5dda29807a1312cc7bc73846e624e", + "protein_translation": "MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011475" + ], + [ + "gene_synonym", + "ECK3496" + ], + [ + "gene_synonym", + "EcoGene:EG11544" + ], + [ + "gene_synonym", + "GI:16131384" + ], + [ + "gene_synonym", + "GeneID:948023" + ], + [ + "gene_synonym", + "JW3480" + ], + [ + "gene_synonym", + "NP_417969.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63204" + ], + [ + "gene_synonym", + "b3512" + ], + [ + "gene_synonym", + "gadE" + ], + [ + "gene_synonym", + "yhiE" + ], + [ + "gene_synonym", + "yhiT" + ] + ], + "dna_sequence": "ATGATTTTTCTCATGACGAAAGATTCTTTTCTTTTACAGGGCTTTTGGCAGTTGAAAGATAATCACGAAATGATAAAAATCAATTCCCTGTCAGAGATCAAAAAAGTAGGCAATAAACCCTTCAAGGTTATCATTGATACCTATCACAATCATATCCTTGATGAAGAAGCGATTAAATTTCTGGAGAAATTAGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAG", + "dna_sequence_length": 528, + "functions": [ + "gad regulon transcriptional activator" + ], + "id": "CDS_3449", + "location": [ + [ + "NC_000913", + 3658366, + "+", + 528 + ] + ], + "md5": "edff17cc7cd3b5e55ffb66cad3248e7a", + "parent_gene": "", + "protein_md5": "df9b74708cc1a3803391984b0597a232", + "protein_translation": "MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011478" + ], + [ + "gene_synonym", + "ECK3497" + ], + [ + "gene_synonym", + "EcoGene:EG12240" + ], + [ + "gene_synonym", + "GI:16131385" + ], + [ + "gene_synonym", + "GeneID:948031" + ], + [ + "gene_synonym", + "JW3481" + ], + [ + "gene_synonym", + "NP_417970.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37636" + ], + [ + "gene_synonym", + "b3513" + ], + [ + "gene_synonym", + "mdtE" + ], + [ + "gene_synonym", + "yhiU" + ] + ], + "dna_sequence": "ATGAACAGAAGAAGAAAGCTGTTAATACCGTTGTTATTCTGCGGCGCGATGCTCACCGCCTGCGATGACAAATCGGCGGAAAACGCCGCCGCCATGACGCCTGAGGTCGGTGTCGTCACACTCTCCCCCGGTTCGGTCAATGTGTTGAGCGAATTGCCCGGTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCCAAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCGTCAGCGGGAAATCGTCGGTGACCGTCGGCGCACTCGTTACCGCTAATCAGGCAGATTCGCTGGTTACCGTACAACGTCTGGACCCGATTTATGTCGATCTCACGCAGTCGGTGCAAGATTTCTTACGCATGAAAGAAGAGGTCGCCAGTGGGCAAATCAAACAGGTTCAGGGCAGTACGCCAGTACAGCTCAATCTGGAAAATGGTAAACGCTACAGCCAGACCGGCACGCTGAAATTCTCCGACCCGACAGTGGATGAAACCACGGGCTCCGTGACGTTACGGGCGATTTTCCCCAACCCAAATGGTGACTTGCTGCCTGGCATGTACGTCACGGCATTAGTGGATGAAGGTAGCCGCCAGAATGTATTACTGGTGCCGCAGGAAGGCGTCACCCACAACGCCCAGGGTAAAGCAACGGCGCTCATTCTGGATAAAGACGATGTCGTGCAGCTACGCGAAATTGAAGCCAGCAAAGCCATCGGCGACCAGTGGGTCGTCACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAA", + "dna_sequence_length": 1158, + "functions": [ + "anaerobic multidrug efflux transporter, ArcA-regulated" + ], + "id": "CDS_3450", + "location": [ + [ + "NC_000913", + 3659232, + "+", + 1158 + ] + ], + "md5": "e410fa905b504efac3f77a368fd840bd", + "parent_gene": "", + "protein_md5": "a250519128938876abacc9363e2705cc", + "protein_translation": "MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIEASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011480" + ], + [ + "gene_synonym", + "ECK3498" + ], + [ + "gene_synonym", + "EcoGene:EG12241" + ], + [ + "gene_synonym", + "GI:16131386" + ], + [ + "gene_synonym", + "GeneID:948030" + ], + [ + "gene_synonym", + "JW3482" + ], + [ + "gene_synonym", + "NP_417971.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37637" + ], + [ + "gene_synonym", + "b3514" + ], + [ + "gene_synonym", + "mdtF" + ], + [ + "gene_synonym", + "yhiV" + ] + ], + "dna_sequence": "ATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTACCTATCCAGGTGCCGATGCGCAAACGGTAGAAGACTCGGTCACTCAGGTGATTGAGCAAAATATGAATGGGCTTGATGGCCTGATGTACATGTCTTCAACCAGTGATGCGGCGGGCAATGCCTCTATCACTCTGACCTTCGAGACTGGGACATCTCCTGATATCGCACAGGTTCAAGTGCAAAATAAACTGCAACTCGCTATGCCTTCATTACCTGAAGCAGTGCAGCAGCAGGGGATTAGCGTCGATAAGTCGAGCAGTAATATCCTGATGGTAGCGGCGTTTATTTCTGATAACGGCAGCCTCAACCAGTACGATATCGCGGACTATGTAGCGTCTAATATCAAAGACCCGCTAAGCCGTACCGCGGGCGTTGGTAGCGTACAACTCTTTGGTTCCGAGTATGCCATGCGTATCTGGCTGGACCCGCAAAAACTCAATAAATATAACCTGGTACCTTCCGATGTTATTTCCCAGATTAAGGTGCAAAACAACCAGATTTCCGGTGGTCAACTGGGTGGCATGCCACAGGCGGCAGACCAGCAGCTAAACGCCTCGATCATTGTGCAGACGCGTCTGCAAACGCCGGAAGAATTTGGCAAAATCCTGTTGAAAGTTCAGCAAGATGGTTCGCAAGTGCTGCTGCGTGATGTCGCTCGCGTCGAACTTGGGGCGGAAGATTATTCCACCGTGGCACGCTATAACGGCAAACCTGCTGCCGGGATCGCCATCAAACTGGCTGCCGGAGCAAACGCCCTGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGTTTTTGCAGAATTTCCGTGCCACAATCATCCCGACGATTGCCGTACCGGTGGTTATTCTCGGGACGTTTGCGATCTTGTCGGCGGTCGGTTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGTGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTCCGCAGTGTTTATGCCGATGGCCTTTATGAGCGGTGCAACCGGGGAGATCTACCGCCAGTTCTCCATCACGCTGATCTCCTCCATGCTGCTTTCAGTATTTGTGGCAATGAGCCTGACCCCTGCCCTGTGCGCCACCATTCTGAAAGCCGCGCCGGAAGGCGGTCACAAACCTAACGCCCTGTTCGCACGCTTCAACACGCTGTTTGAAAAATCAACTCAACACTATACCGATAGCACCCGCTCGCTGTTGCGTTGTACCGGTCGCTACATGGTGGTCTACCTGCTGATTTGCGCCGGGATGGCGGTGCTGTTCCTGCGCACGCCGACCTCTTTCTTACCAGAAGAGGATCAGGGGGTATTTATGACCACCGCGCAGTTACCTTCCGGTGCCACCATGGTTAACACCACGAAAGTGCTGCAACAGGTGACGGATTATTATCTGACTAAAGAGAAAGATAATGTCCAGTCGGTGTTTACCGTTGGCGGCTTTGGCTTCAGCGGTCAGGGGCAAAACAACGGCCTGGCGTTTATCAGTCTCAAGCCGTGGTCTGAACGTGTCGGTGAGGAAAACTCGGTTACCGCGATCATTCAGCGGGCAATGATTGCGTTAAGCAGTATCAATAAAGCCGTCGTCTTCCCGTTCAACTTACCCGCGGTGGCTGAACTGGGTACCGCGTCAGGTTTTGATATGGAACTGCTGGACAACGGTAACCTGGGGCACGAAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTCTGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAATTTATGGCAGACCTGGTCGCTAAACTTCCGGCAGGCGTCGGCTACTCATGGACCGGACTATCGTATCAGGAAGCGTTATCCTCAAATCAGGCTCCTGCGCTGTATGCGATTTCACTGGTCGTGGTGTTCCTCGCCCTCGCCGCACTCTATGAGAGCTGGTCAATTCCGTTCTCGGTGATGTTGGTTGTTCCGTTAGGCGTCGTTGGCGCATTACTGGCCACCGATCTGCGCGGCTTAAGTAATGACGTCTACTTCCAGGTTGGTTTGCTGACCACCATCGGGCTTTCCGCCAAAAACGCCATCCTGATTGTCGAATTTGCCGTTGAGATGATGCAGAAAGAAGGGAAAACGCCGATAGAGGCAATCATCGAAGCGGCGCGGATGCGTTTACGCCCAATCCTGATGACCTCTCTGGCCTTTATTCTCGGCGTGCTGCCGCTGGTTATCAGTCATGGTGCCGGTTCTGGCGCGCAAAACGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAACATCTCTTTGCCCGCTTTAAAAAAGCGTAA", + "dna_sequence_length": 3114, + "functions": [ + "anaerobic multidrug efflux transporter, ArcA-regulated" + ], + "id": "CDS_3451", + "location": [ + [ + "NC_000913", + 3660414, + "+", + 3114 + ] + ], + "md5": "8c4b2389201d9ad7dec63c36956bc859", + "parent_gene": "", + "protein_md5": "e5d2cfe417caffa915a0fa6a830e5037", + "protein_translation": "MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLAAGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPNQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHLFARFKKA", + "protein_translation_length": 1037, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011482" + ], + [ + "gene_synonym", + "ECK3499" + ], + [ + "gene_synonym", + "EcoGene:EG12242" + ], + [ + "gene_synonym", + "GI:16131387" + ], + [ + "gene_synonym", + "GeneID:948029" + ], + [ + "gene_synonym", + "JW3483" + ], + [ + "gene_synonym", + "NP_417972.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63201" + ], + [ + "gene_synonym", + "b3515" + ], + [ + "gene_synonym", + "gadW" + ], + [ + "gene_synonym", + "yhiW" + ] + ], + "dna_sequence": "ATGACTCATGTCTGCTCGGTGATCCTCATTCGTCGTTCATTCGATATTTATCATGAACAGCAAAAAATATCGCTGCATAACGAGAGTATTCTGCTGCTGGAGAAAAATTTGGCAGACGATTTTGCGTTTTGTTCACCGGATACGCGACGACTGGATATCGATGAGCTGACAGTTTGCCATTACTTACAAAATATTCGTCAGCTACCACGCAATTTAGGGTTACACAGCAAAGACCGTTTGTTAATTAACCAGTCACCCCCCATGCCGCTGGTGACGGCGATTTTTGATAGCTTCAATGAATCCGGGGTAAATTCACCGATACTGAGCAATATGCTCTACCTTTCCTGTTTATCGATGTTTTCTCATAAGAAAGAACTGATCCCCTTACTTTTCAATAGCATCAGCACTGTTTCAGGAAAAGTTGAACGCCTTATTAGCTTTGATATCGCCAAACGTTGGTATCTGCGCGATATCGCGGAAAGAATGTATACCAGCGAGAGTCTAATCAAAAAAAAGTTGCAGGATGAAAATACCTGTTTCAGTAAAATATTACTCGCCTCCAGGATGTCGATGGCCAGACGATTACTCGAGTTACGTCAAATTCCTCTGCATACTATTGCGGAAAAATGTGGCTATAGCAGTACATCGTACTTTATAAACACATTTCGACAATATTATGGTGTAACGCCACATCAGTTTGCGCAACATTCGCCAGGTACCTTTTCCTGA", + "dna_sequence_length": 729, + "functions": [ + "transcriptional activator of gadA and gadBC", + "repressor of gadX" + ], + "id": "CDS_3452", + "location": [ + [ + "NC_000913", + 3664618, + "-", + 729 + ] + ], + "md5": "4aa9fd4a7f23066e91bf6aa512e0f0d0", + "parent_gene": "", + "protein_md5": "2d0584b36a0ac81361ae76d80a82fcf4", + "protein_translation": "MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011487" + ], + [ + "gene_synonym", + "ECK3501" + ], + [ + "gene_synonym", + "EcoGene:EG12243" + ], + [ + "gene_synonym", + "GI:16131388" + ], + [ + "gene_synonym", + "GeneID:948028" + ], + [ + "gene_synonym", + "JW3484" + ], + [ + "gene_synonym", + "NP_417973.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37639" + ], + [ + "gene_synonym", + "b3516" + ], + [ + "gene_synonym", + "gadX" + ], + [ + "gene_synonym", + "yhiX" + ] + ], + "dna_sequence": "ATGCAATCACTACATGGGAATTGTCTAATTGCGTATGCAAGACATAAATATATTCTCACCATGGTTAATGGTGAATATCGCTATTTTAATGGCGGTGACCTGGTTTTTGCGGATGCAAGCCAAATTCGAGTAGATAAGTGTGTTGAAAATTTTGTATTCGTGTCAAGGGACACGCTTTCATTATTTCTCCCGATGCTCAAGGAGGAGGCATTAAATCTTCATGCACATAAAAAAGTTTCTTCATTACTCGTTCATCACTGTAGTAGAGATATTCCTGTTTTTCAGGAAGTTGCGCAACTATCGCAGAATAAGAATCTTCGCTATGCAGAAATGCTACGTAAAAGAGCATTAATCTTTGCGTTGTTATCTGTTTTTCTTGAGGATGAGCACTTTATACCGCTGCTTCTGAACGTTTTACAACCGAACATGCGAACACGAGTTTGTACGGTTATCAATAATAATATCGCCCATGAGTGGACACTAGCCCGAATCGCCAGCGAGCTGTTGATGAGTCCAAGTCTGTTAAAGAAAAAATTGCGCGAAGAAGAGACATCATATTCACAGTTGCTTACTGAGTGTAGAATGCAACGTGCTTTGCAACTTATTGTTATACATGGTTTTTCAATTAAGCGAGTTGCAGTATCCTGTGGATATCACAGCGTGTCGTATTTCATTTACGTCTTTCGAAATTATTATGGGATGACGCCCACAGAGTATCAGGAGCGATCGGCGCAGAGATTGTCGAACCGTGACTCGGCGGCAAGTATTGTTGCGCAAGGGAATTTTTACGGCACTGACCGTTCTGCGGAAGGAATAAGATTATAG", + "dna_sequence_length": 825, + "functions": [ + "acid resistance regulon transcriptional activator", + "autoactivator" + ], + "id": "CDS_3453", + "location": [ + [ + "NC_000913", + 3665810, + "-", + 825 + ] + ], + "md5": "17641557eb2755f182f461cef847e618", + "parent_gene": "", + "protein_md5": "231dd8666a5a46d071509482027df3cd", + "protein_translation": "MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011490" + ], + [ + "gene_synonym", + "ECK3502" + ], + [ + "gene_synonym", + "EcoGene:EG50009" + ], + [ + "gene_synonym", + "GI:16131389" + ], + [ + "gene_synonym", + "GeneID:948027" + ], + [ + "gene_synonym", + "JW3485" + ], + [ + "gene_synonym", + "NP_417974.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69908" + ], + [ + "gene_synonym", + "b3517" + ], + [ + "gene_synonym", + "gadA" + ], + [ + "gene_synonym", + "gadS" + ] + ], + "dna_sequence": "ATGGACCAGAAGCTGTTAACGGATTTCCGCTCAGAACTACTCGATTCACGTTTTGGCGCAAAGGCCATTTCTACTATCGCGGAGTCAAAACGATTTCCGCTGCACGAAATGCGCGATGATGTCGCATTTCAGATTATCAATGATGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAACGTCCATAAATTGATGGATTTGTCGATCAATAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACCGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGACACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTACGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAGCAGAACAGCTTTAAACACACCTGA", + "dna_sequence_length": 1401, + "functions": [ + "glutamate decarboxylase A, PLP-dependent" + ], + "id": "CDS_3454", + "location": [ + [ + "NC_000913", + 3667580, + "-", + 1401 + ] + ], + "md5": "7bf65bf9be53f1737044cc9194bf7831", + "parent_gene": "", + "protein_md5": "2b4f5dc375d165b36bcd059ce2986a5b", + "protein_translation": "MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011493" + ], + [ + "gene_synonym", + "ECK3503" + ], + [ + "gene_synonym", + "EcoGene:EG12244" + ], + [ + "gene_synonym", + "GI:16131390" + ], + [ + "gene_synonym", + "GeneID:948038" + ], + [ + "gene_synonym", + "JW3486" + ], + [ + "gene_synonym", + "NP_417975.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37197" + ], + [ + "gene_synonym", + "b3518" + ], + [ + "gene_synonym", + "yhjA" + ] + ], + "dna_sequence": "ATGAAAATGGTCTCACGTATTACCGCGATCGGCCTGGCTGGCGTCGCGATTTGCTATTTAGGGTTATCTGGTTATGTGTGGTACCACGATAATAAACGCAGTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAGGATGCGACTATTGCCACACGCCTTCGGCAGAATTACCCGCCTATTATTATATTCCTGGCGCGAAACAGTTGATGGATTACGACATTAAGCTTGGATATAAATCTTTTAACCTTGAGGCCGTGCGTGCGGCACTGCTGGCTGATAAACCCGTTTCGCAAAGCGATTTGAATAAGATTGAATGGGTGATGCAGTATGAAACTATGCCACCAACGCGTTATACCGCGCTACACTGGGCGGGTAAGGTGAGTGATGAAGAGCGGGCGGAAATACTGGCCTGGATTGCAAAACAGCGCGCGGAATATTACGCCAGCAATGATACTGCTCCGGAACATCGCAATGAACCGGTGCAGCCCATCCCGCAAAAACTGCCTACCGATGCGCAAAAAGTGGCGTTGGGTTTTGCGCTGTATCACGATCCCCGTTTATCGGCTGATAGCACCATTTCATGCGCTCATTGCCATGCGTTGAATGCGGGGGGCGTCGATGGCAGAAAAACATCGATTGGTGTTGGTGGCGCAGTTGGGCCGATTAACGCGCCGACGGTATTTAACTCAGTATTTAACGTTGAGCAGTTCTGGGATGGTCGTGCGGCAACATTGCAGGATCAGGCTGGTGGACCGCCGTTGAACCCGATTGAAATGGCGTCGAAATCCTGGGACGAAATTATTGCTAAGCTGGAAAAAGATCCGCAGCTTAAAACGCAGTTCCTCGAAGTCTATCCGCAAGGTTTCAGTGGCGAAAATATTACTGATGCCATTGCTGAATTTGAGAAAACATTAATTACGCCGGATTCCCCATTTGATAAATGGTTGCGCGGAGATGAAAATGCGCTGACGGCGCAACAGAAAAAAGGCTATCAATTATTTAAAGATAATAAATGTGCAACTTGTCATGGTGGTATTATTCTCGGCGGACGTTCCTTTGAACCGTTGGGGCTGAAAAAAGACTTTAACTTTGGGGAAATTACGGCGGCGGATATTGGTCGTATGAATGTGACTAAAGAAGAGCGTGATAAATTGCGTCAGAAAGTACCCGGTTTACGTAACGTTGCTTTAACGGCACCGTACTTCCATCGCGGTGACGTGCCGACGCTGGACGGGGCGGTGAAACTGATGCTGCGCTATCAGGTAGGCAAAGAGCTGCCGCAGGAGGATGTGGATGATATCGTAGCTTTCCTGCACAGTCTGAACGGGGTGTACACGCCGTATATGCAGGATAAACAATAA", + "dna_sequence_length": 1398, + "functions": [ + "putative cytochrome C peroxidase" + ], + "id": "CDS_3455", + "location": [ + [ + "NC_000913", + 3669188, + "-", + 1398 + ] + ], + "md5": "fd659a9947c5c2107d20b6353fae23f9", + "parent_gene": "", + "protein_md5": "95804d582c3fa91c2361e84073f42252", + "protein_translation": "MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011497" + ], + [ + "gene_synonym", + "ECK3504" + ], + [ + "gene_synonym", + "EcoGene:EG12245" + ], + [ + "gene_synonym", + "GI:16131391" + ], + [ + "gene_synonym", + "GeneID:948037" + ], + [ + "gene_synonym", + "JW3487" + ], + [ + "gene_synonym", + "NP_417976.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62601" + ], + [ + "gene_synonym", + "b3519" + ], + [ + "gene_synonym", + "treF" + ] + ], + "dna_sequence": "ATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGATCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTTTGTTGAAAACCACTTCTGGCTGCCGGAGGTCTACTCCAGCGAGTATGTATCGGACCCGCAAAATTCCCTGAAAGAGCATATCGACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCCAACGGCAACCGCACCTATTATTTGAGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTACCACCCAGTTCATCCCCATCGATCTGAATGCCTTCCTGTTTAAACTGGAGAGCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTGGGCACCGTTACAATGGATGGCGATTCAGGGATTTAAAATGTACGGCGATGACCTTCTGGGTGATGAAATCGCGCGAAGCTGGCTGAAGACGGTGAATCAGTTCTATCTGGAACAGCACAAACTGATCGAAAAATACCATATTGCCGATGGTGTTCCCCGCGAAGGCGGCGGTGGCGAGTATCCGTTGCAGGATGGGTTTGGCTGGACTAACGGTGTGGTACGCCGTTTAATTGGTTTGTACGGCGAACCATAA", + "dna_sequence_length": 1650, + "functions": [ + "cytoplasmic trehalase" + ], + "id": "CDS_3456", + "location": [ + [ + "NC_000913", + 3669592, + "+", + 1650 + ] + ], + "md5": "b4ed2f3936847f9b7a156e0267ce4f9e", + "parent_gene": "", + "protein_md5": "9f913760ae5fc270b0bcfd6304847fad", + "protein_translation": "MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMIEGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP", + "protein_translation_length": 549, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011499" + ], + [ + "gene_synonym", + "ECK3505" + ], + [ + "gene_synonym", + "EcoGene:EG12246" + ], + [ + "gene_synonym", + "GI:16131392" + ], + [ + "gene_synonym", + "GeneID:948036" + ], + [ + "gene_synonym", + "JW3488" + ], + [ + "gene_synonym", + "NP_417977.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37640" + ], + [ + "gene_synonym", + "b3520" + ], + [ + "gene_synonym", + "yhjB" + ] + ], + "dna_sequence": "ATGCAAATAGTCATGTTTGACAGGCAGTCAATATTTATTCATGGAATGAAAATCAGTTTACAGCAGCGTATTCCAGGAGTGAGTATTCAGGGGGCCAGTCAGGCAGACGAGTTATGGCAAAAGCTGGAAAGTTACCCTGAAGCCTTAGTTATGCTCGATGGCGATCAGGATGGTGAGTTTTGCTACTGGTTGCTGCAAAAAACCGTGGTGCAATTTCCTGAGGTTAAGGTGTTAATTACGGCGACGGATTGCAATAAACGGTGGTTACAGGAAGTTATCCATTTTAATGTGCTGGCCATTGTGCCTCGTGATTCAACCGTCGAGACATTTGCGTTGGCGGTAAATAGTGCGGCGATGGGGATGATGTTTCTGCCTGGAGACTGGCGGACGACGCCGGAAAAGGACATTAAAGATCTCAAATCGTTAAGCGCCCGCCAGCGGGAGATTTTAACCATGTTAGCGGCGGGCGAATCAAATAAGGAGATCGGCAGAGCGCTGAATATCAGTACCGGAACGGTAAAAGCGCATCTGGAATCCCTGTATCGCCGTCTGGAAGTGAAAAATCGCACCCAGGCGGCAATGATGTTAAATATCTCCTCCTGA", + "dna_sequence_length": 603, + "functions": [ + "putative DNA-binding transcriptional response regulator" + ], + "id": "CDS_3457", + "location": [ + [ + "NC_000913", + 3671894, + "-", + 603 + ] + ], + "md5": "44e5cdd5bb601a107b9de8d4ea0e1b83", + "parent_gene": "", + "protein_md5": "ac797bbc1012fe9e3a1d90be39c0f000", + "protein_translation": "MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011503" + ], + [ + "gene_synonym", + "ECK3506" + ], + [ + "gene_synonym", + "EcoGene:EG12247" + ], + [ + "gene_synonym", + "GI:145698322" + ], + [ + "gene_synonym", + "GeneID:948035" + ], + [ + "gene_synonym", + "JW3489" + ], + [ + "gene_synonym", + "NP_417978.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37641" + ], + [ + "gene_synonym", + "b3521" + ], + [ + "gene_synonym", + "yhjC" + ] + ], + "dna_sequence": "ATGGATAAAATTCACGCAATGCAGTTGTTCATCAAAGTCGCGGAGCTGGAAAGTTTTTCCCGCGCAGCGGATTTCTTTGCTTTGCCAAAGGGAAGTGTTTCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCATCGACATCCCGCCAGGAATCGCGAAAAGCCTGTTACTGCCGCGCCTGTCGGAATTTCTCTATCTGCATCCGGGAATTGAGCTGGAACTGAGTAGCCATGACCGTCCGGTAGATATTCTTCATGATGGTTTTGATTGCGTGATACGCACTGGCGCGTTACCGGAAGATGGCGTTATCGCCCGTCCCCTCGGCAAACTGACCATGGTCAACTGTGCCAGTCCGCACTATCTGACGCGCTTTGGTTATCCGCAAAGCCCCGATGATCTGACTTCACACGCAATAGTGCGTTATACACCGCACCTGGGTGTACATCCGTTAGGTTTTGAGGTTGCCAGCGTTAATGGCGTCCAGTGGTTTAAGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGA", + "dna_sequence_length": 900, + "functions": [ + "LysR family putative transcriptional regulator" + ], + "id": "CDS_3458", + "location": [ + [ + "NC_000913", + 3672414, + "+", + 900 + ] + ], + "md5": "96717ecb53670c877b71a7cd0aacb3f1", + "parent_gene": "", + "protein_md5": "665b1496a8dda2ff4cab136ee69e47cd", + "protein_translation": "MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEYLD", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011505" + ], + [ + "gene_synonym", + "ECK3507" + ], + [ + "gene_synonym", + "EcoGene:EG12248" + ], + [ + "gene_synonym", + "GI:16131394" + ], + [ + "gene_synonym", + "GeneID:948033" + ], + [ + "gene_synonym", + "JW3490" + ], + [ + "gene_synonym", + "NP_417979.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37642" + ], + [ + "gene_synonym", + "b3522" + ], + [ + "gene_synonym", + "yhjD" + ] + ], + "dna_sequence": "ATGACGCAGGAAAACGAGATCAAACGTCCCATCCAGGATCTGGAGCACGAGCCGATTAAGCCGTTGGATAATAGCGAGAAAGGCAGCAAAGTTAGCCAGGCGCTGGAAACCGTCACCACCACTGCCGAAAAAGTCCAACGCCAACCGGTTATTGCGCACCTGATTCGCGCGACAGAACGCTTTAACGATCGGCTGGGTAACCAGTTTGGTGCGGCTATCACCTATTTCTCATTTTTGTCGATGATACCAATTTTGATGGTGTCGTTTGCCGCAGGGGGCTTTGTGCTGGCCTCCCATCCGATGTTGCTACAGGATATCTTCGACAAAATTCTGCAAAACATCAGCGATCCGACGCTAGCCGCCACGTTGAAAAACACCATCAACACCGCCGTTCAGCAGCGTACGACTGTAGGGCTTGTCGGCCTGGCGGTGGCACTTTATTCCGGCATCAACTGGATGGGTAACCTGCGTGAAGCGATTCGTGCCCAGTCGCGCGATGTCTGGGAACGCTCGCCGCAAGATCAGGAGAAGTTCTGGGTAAAATATCTGCGAGATTTTATTTCGCTGATTGGTTTGTTGATTGCGCTGATTGTGACGCTTTCGATCACCTCGGTTGCCGGTTCGGCGCAGCAAATGATTATTAGCGCCCTGCACCTGAACAGCATTGAGTGGCTGAAACCGACGTGGCGATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAA", + "dna_sequence_length": 1014, + "functions": [ + "inner membrane putative BrbK family alternate lipid exporter" + ], + "id": "CDS_3459", + "location": [ + [ + "NC_000913", + 3673362, + "+", + 1014 + ] + ], + "md5": "1331679e905ce2d1f1d82f8a2d48de47", + "parent_gene": "", + "protein_md5": "3e1737b4d0fa1a6a841588f94205858e", + "protein_translation": "MTQENEIKRPIQDLEHEPIKPLDNSEKGSKVSQALETVTTTAEKVQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP", + "protein_translation_length": 337, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011509" + ], + [ + "gene_synonym", + "ECK3508" + ], + [ + "gene_synonym", + "EcoGene:EG12249" + ], + [ + "gene_synonym", + "GI:16131395" + ], + [ + "gene_synonym", + "GeneID:948032" + ], + [ + "gene_synonym", + "JW3491" + ], + [ + "gene_synonym", + "NP_417980.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37643" + ], + [ + "gene_synonym", + "b3523" + ], + [ + "gene_synonym", + "yhjE" + ] + ], + "dna_sequence": "ATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGTTCTTCGACTTTTACATTTACGCCACTGCGGCCGTTATTGTGTTTCCGCATATCTTCTTCCCGCAGGGCGATCCTACGGCAGCAACGCTACAGTCGCTCGCCACCTTCGCCATCGCCTTCGTCGCGCGCCCCATTGGCTCTGCCGTTTTTGGTCATTTTGGCGATCGCGTTGGGCGTAAAGCGACGCTGGTCGCCTCGTTGCTAACGATGGGGATTTCGACCGTGGTGATTGGTCTGCTGCCGGGCTATGCCACGATTGGTATTTTCGCCCCGCTGCTGCTGGCGCTGGCTCGATTTGGTCAGGGTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTATCGGCCTGTATGTTCGCGTGTCGCTGCATGAGTCGCCGGTGTTTGAGAAAGTCGCTAAAGCGAAAAAACAGGTGAAGATCCCGCTGGGTACGCTGCTGACCAAACATGTTCGCGTAACCGTACTGGGTACGTTCATTATGCTGGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGTGTTGTGGATGTTGATGATGGCAGTTATTGGTTTTGGCGTGATGGTGCCAGTCGCTGGATTACTGGCTGATGCCTTTGGTCGCCGTAAAAGCATGGTAATCATCACCACGCTGATCATCCTGTTCGCGCTGTTCGCCTTTAACCCACTGCTCGGTTCTGGCAACCCGATTCTGGTTTTTGCCTTCCTGCTGCTGGGGTTAAGTCTGATGGGTCTGACCTTCGGGCCAATGGGTGCGCTGTTACCAGAGCTGTTTCCGACAGAAGTGCGTTACACCGGAGCATCGTTCTCTTACAACGTAGCGTCGATTCTCGGGGCTTCCGTTGCGCCATATATCGCAGCCTGGTTGCAGACTAACTACGGGCTAGGTGCGGTGGGGTTATATCTGGCGGCGATGGCTGGCTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAA", + "dna_sequence_length": 1323, + "functions": [ + "putative MFS transporter", + "membrane protein" + ], + "id": "CDS_3460", + "location": [ + [ + "NC_000913", + 3674786, + "+", + 1323 + ] + ], + "md5": "94341cd9633a2471a5ffdfaa2f5e2bb8", + "parent_gene": "", + "protein_md5": "21e767f9db07c80048f10d7a0187a4b3", + "protein_translation": "MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVASILGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011512" + ], + [ + "gene_synonym", + "ECK3509" + ], + [ + "gene_synonym", + "EcoGene:EG12251" + ], + [ + "gene_synonym", + "GI:226524754" + ], + [ + "gene_synonym", + "GeneID:948043" + ], + [ + "gene_synonym", + "JW3492" + ], + [ + "gene_synonym", + "NP_417981.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37645" + ], + [ + "gene_synonym", + "b3524" + ], + [ + "gene_synonym", + "yhjF" + ], + [ + "gene_synonym", + "yhjG" + ] + ], + "dna_sequence": "ATGAGCAAGGCAGGCAAAATAACCGCTGCGATTTCAGGGGCTTTCTTGTTGTTGATTGTCGTGGCGATCATTTTGATTGCAACTTTTGACTGGAATCGACTCAAACCGACTATCAACCAGAAAGTCTCTGCGGAGTTGAATCGTCCGTTCGCTATCCGTGGCGATCTGGGCGTGGTGTGGGAGCGGCAAAAACAAGAAACTGGCTGGCGCAGCTGGGTGCCGTGGCCCCATGTACACGCGGAAGACATCATTCTTGGCAATCCACCGGATATTCCCGAAGTCACGATGGTGCATTTGCCACGCGTAGAGGCAACGCTGGCCCCGCTGGCGCTGCTGACCAAAACGGTCTGGCTGCCGTGGATCAAGCTCGAAAAGCCCGACGCGCGCCTGATTCGCCTCTCTGAAAAGAACAATAACTGGACGTTTAATCTTGCCAACGATGATAACAAAGACGCGAATGCAAAGCCGTCGGCATGGTCGTTTCGGCTGGATAATATTCTTTTCGATCAAGGGCGGATCGCCATTGATGACAAAGTAAGCAAAGCGGATCTGGAGATTTTTGTTGATCCCTTAGGCAAGCCGCTGCCGTTCAGCGAAGTTACTGGATCGAAAGGTAAAGCGGATAAAGAAAAGGTGGGCGATTACGTTTTTGGCCTGAAGGCGCAGGGACGATATAACGGTGAACCGCTCACGGGTACGGGAAAAATAGGCGGTATGCTGGCGCTGCGTGGCGAAGGGACGCCGTTTCCGGTACAGGCTGATTTCCGCTCTGGTAACACCCGTGTTGCTTTTGATGGCGTCGTGAATGACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTCGGTCTTTGATTATCGCGGTTTTAATGGGCGAATTGGTGATAGCGATATCCACGGTTCTCTGGTCTACACCACCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGGCTGGCGGACCTGGGACCGTTGATTGGCGTTGATTCCGGGAAAGGGGCAGAAAAGTCGAAACGGTCTGAACAGAAGAAGGGCGAAAAAAGCGTTCAGCCTGCGGGCAAAGTGCTGCCTTATGACCGCTTCGAAACCGATAAATGGGACGTTATGGATGCCGATGTTCGCTTCAAAGGGCGGCGCATTGAGCATGGCAGTAGCCTGCCGATTAGCGATCTTTCTACTCATATCATCCTCAAAAATGCTGACCTGCGCCTGCAACCGCTGAAATTTGGCATGGCGGGCGGCAGCATTGCGGCGAATATTCATCTGGAAGGCGATAAAAAGCCGATGCAGGGGCGGGCAGATATTCAGGCTCGTCGACTGAAACTGAAAGAACTGATGCCCGATGTGGAACTGATGCAGAAGACGCTGGGGGAAATGAACGGTGACGCGGAACTACGCGGTAGCGGTAACTCGGTGGCGGCACTTTTAGGCAACAGTAACGGCAACCTGAAACTGTTGATGAATGACGGGCTGGTGAGCCGCAACCTGATGGAGATTGTTGGGCTGAATGTCGGCAACTACATTGTCGGTGCGATATTTGGTGATGATGAGGTGCGGGTGAACTGCGCGGCGGCGAATCTGAATATTGCCAACGGCGTGGCGCGCCCGCAGATTTTTGCTTTCGATACTGAGAACGCGTTGATTAATGTTACCGGCACGGCAAGTTTTGCTTCGGAACAGCTGGATTTGACTATTGATCCGGAGAGTAAAGGAATTCGGATTATCACACTGCGTTCGCCGCTGTATGTGCGGGGGACGTTTAAAAATCCGCAGGCTGGGGTGAAAGCCGGACCGCTGATTGCCCGTGGTGCTGTTGCTGCGGCACTGGCAACGCTGGTAACACCGGCGGCGGCGTTACTGGCACTGATCTCACCTTCCGAAGGGGAGGCTAATCAGTGTCGGACGATTTTGTCGCAGATGAAGAAGTGA", + "dna_sequence_length": 2061, + "functions": [ + "putative inner membrane-anchored periplasmic AsmA family protein" + ], + "id": "CDS_3461", + "location": [ + [ + "NC_000913", + 3678350, + "-", + 2061 + ] + ], + "md5": "1cf022e6287645d6bb39baa228d3395c", + "parent_gene": "", + "protein_md5": "4294920d88d2db92cb19badef5b2ded4", + "protein_translation": "MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK", + "protein_translation_length": 686, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011515" + ], + [ + "gene_synonym", + "ECK3510" + ], + [ + "gene_synonym", + "EcoGene:EG12252" + ], + [ + "gene_synonym", + "GI:90111605" + ], + [ + "gene_synonym", + "GeneID:948042" + ], + [ + "gene_synonym", + "JW3493" + ], + [ + "gene_synonym", + "NP_417982.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37646" + ], + [ + "gene_synonym", + "b3525" + ], + [ + "gene_synonym", + "yhjH" + ] + ], + "dna_sequence": "ATGATAAGGCAGGTTATCCAGCGAATAAGCAACCCTGAAGCAAGCATCGAGAGCTTGCAGGAACGGCGTTTTTGGTTGCAGTGTGAGCGTGCTTACACCTGGCAGCCGATCTATCAAACATGCGGGCGGTTAATGGCCGTGGAGCTATTAACGGTGGTCACGCATCCCTTGAACCCTTCGCAACGCCTGCCGCCGGATCGCTATTTTACTGAAATCACCGTCAGCCATCGGATGGAGGTTGTGAAAGAGCAGATTGATTTGCTGGCGCAAAAAGCCGACTTCTTTATAGAGCACGGCCTGCTGGCATCGGTCAATATTGATGGCCCTACGCTCATCGCCCTGCGTCAGCAACCAAAAATCCTGCGCCAGATTGAGCGTCTTCCCTGGCTGCGTTTCGAACTGGTGGAGCATATCCGTCTGCCGAAAGATTCAACCTTTGCCTCGATGTGTGAATTTGGCCCGCTGTGGCTGGATGATTTTGGTACCGGGATGGCAAATTTCTCTGCGCTAAGTGAAGTGCGTTATGACTACATCAAAATCGCGCGAGAACTGTTTGTGATGCTGCGTCAGTCGCCGGAAGGACGCACACTCTTTTCTCAGCTTTTACATCTAATGAATCGCTATTGTCGCGGGGTGATTGTCGAGGGCGTAGAAACGCCGGAAGAGTGGCGTGATGTTCAGAACTCGCCCGCATTCGCCGCACAAGGCTGGTTTCTTTCACGCCCGGCACCGATAGAAACGCTGAATACGGCGGTTCTGGCGCTATAA", + "dna_sequence_length": 768, + "functions": [ + "cyclic-di-GMP phosphodiesterase, FlhDC-regulated" + ], + "id": "CDS_3462", + "location": [ + [ + "NC_000913", + 3679187, + "-", + 768 + ] + ], + "md5": "4694dec07ce44ab998a0ffe2aa1a7ba6", + "parent_gene": "", + "protein_md5": "c38a51b02bc41e134984cdbaa5aa2a34", + "protein_translation": "MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011519" + ], + [ + "gene_synonym", + "ECK3511" + ], + [ + "gene_synonym", + "EcoGene:EG12253" + ], + [ + "gene_synonym", + "GI:90111606" + ], + [ + "gene_synonym", + "GeneID:948041" + ], + [ + "gene_synonym", + "JW5668" + ], + [ + "gene_synonym", + "NP_417983.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37647" + ], + [ + "gene_synonym", + "b3526" + ], + [ + "gene_synonym", + "kdgK" + ], + [ + "gene_synonym", + "yhjI" + ] + ], + "dna_sequence": "ATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAA", + "dna_sequence_length": 930, + "functions": [ + "2-dehydro-3-deoxygluconokinase" + ], + "id": "CDS_3463", + "location": [ + [ + "NC_000913", + 3679419, + "+", + 930 + ] + ], + "md5": "0617e06b8483f3d8b0e8889005ef3dff", + "parent_gene": "", + "protein_md5": "d1b9a14cf123ec8d34db0242ae100040", + "protein_translation": "MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAEDAAKRGHLTASTVIQYRGAIIPREAMPA", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011524" + ], + [ + "gene_synonym", + "ECK3512" + ], + [ + "gene_synonym", + "EcoGene:EG12254" + ], + [ + "gene_synonym", + "GI:16131399" + ], + [ + "gene_synonym", + "GeneID:948040" + ], + [ + "gene_synonym", + "JW3495" + ], + [ + "gene_synonym", + "NP_417984.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37648" + ], + [ + "gene_synonym", + "b3527" + ], + [ + "gene_synonym", + "yhjJ" + ] + ], + "dna_sequence": "ATGCAGGGCACAAAAATTCGACTTTTAGCGGGCGGTTTGCTGATGATGGCCACTGCTGGCTATGTGCAGGCAGATGCGCTCCAGCCTGATCCAGCATGGCAACAGGGGACGCTTTCCAACGGTTTACAGTGGCAAGTGCTGACCACCCCCCAGCGTCCCAGCGATCGTGTTGAAATTCGCCTGCTGGTTAATACCGGTTCGCTCGCCGAAAGTACACAACAGAGCGGTTACAGTCACGCCATCCCTCGTATTGCGCTAACGCAAAGCGGTGGCCTTGACGCAGCACAGGCGCGTTCATTGTGGCAGCAGGGGATCGACCCTAAACGCCCGATGCCGCCGGTAATTGTCTCTTATGACACCACGCTGTTTAATCTGAGTTTGCCCAATAACCGTAACGATTTGCTGAAAGAAGCGCTCTCTTATCTGGCAAATGCCACTGGCAAATTGACCATCACACCAGAAACCATCAACCACGCGCTGCAAAGTCAGGACATGGTGGCAACCTGGCCTGCCGATACTAAAGAGGGCTGGTGGCGCTATCGTCTGAAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGAAAAAATTAAAGATTTCTATCAGAAATGGTACACCCCGGATGCAATGACGCTACTGGTGGTGGGAAACGTGGATGCGCGCTCGGTTGTCGACCAAATAAACAAAACGTTTGGCGAACTGAAAGGCAAACGTGAAACGCCAGCTCCGGTGCCGACGCTTTCTCCGCTGCGTGCGGAAGCGGTGAGTATTATGACTGACGCGGTGCGTCAGGACCGGTTATCTATCATGTGGGATACGCCGTGGCAGCCGATTCGTGAATCAGCCGCACTGCTGCGCTACTGGCGTGCGGACCTGGCCCGCGAGGCGCTGTTCTGGCATGTTCAGCAAGCGTTAAGTGCCAGTAACAGCAAAGACATCGGTCTTGGATTTGACTGCCGTGTGCTGTATCTGCGTGCGCAGTGTGCCATCAACATCGAATCACCAAACGACAAGCTGAACAGCAACCTTAATCTGGTGGCGCGTGAACTGGCGAAGGTTCGCGATAAAGGTCTGCCGGAAGAAGAGTTCAATGCGTTAGTGGCGCAAAAGAAACTGGAGCTGCAGAAACTGTTTGCCGCCTATGCACGAGCTGATACCGATATTCTGATGGGTCAGCGGATGCGTTCGTTGCAAAATCAGGTTGTCGATATCGCGCCGGAGCAATATCAGAAACTGCGGCAGGATTTCCTTAATAGCCTGACGGTAGAGATGTTAAATCAGGATCTGCGTCAACAGTTGTCGAATGATATGGCGTTAATACTGCTGCAGCCGAAAGGCGAGCCGGAATTTAACATGAAAGCGTTGCAGGCGGTCTGGGATCAAATCATGGCCCCATCTACCGCCGCTGCGACCACCTCTGTCGCCACGGATGACGTACATCCTGAAGTGACGGATATTCCACCTGCACAGTAA", + "dna_sequence_length": 1497, + "functions": [ + "putative periplasmic M16 family chaperone" + ], + "id": "CDS_3464", + "location": [ + [ + "NC_000913", + 3681940, + "-", + 1497 + ] + ], + "md5": "fc42678586442665fbaba3b21f652760", + "parent_gene": "", + "protein_md5": "591b84a30cf87f265aca74e16f774d89", + "protein_translation": "MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ", + "protein_translation_length": 498, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011527" + ], + [ + "gene_synonym", + "ECK3513" + ], + [ + "gene_synonym", + "EcoGene:EG20044" + ], + [ + "gene_synonym", + "GI:16131400" + ], + [ + "gene_synonym", + "GeneID:948039" + ], + [ + "gene_synonym", + "JW3496" + ], + [ + "gene_synonym", + "NP_417985.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A830" + ], + [ + "gene_synonym", + "b3528" + ], + [ + "gene_synonym", + "dctA" + ], + [ + "gene_synonym", + "out" + ] + ], + "dna_sequence": "ATGAAAACCTCTCTGTTTAAAAGCCTTTACTTTCAGGTCCTGACAGCGATAGCCATTGGTATTCTCCTTGGCCATTTCTATCCTGAAATAGGCGAGCAAATGAAACCGCTTGGCGACGGCTTCGTTAAGCTCATTAAGATGATCATCGCTCCTGTCATCTTTTGTACCGTCGTAACGGGCATTGCGGGCATGGAAAGCATGAAGGCGGTCGGTCGTACCGGCGCAGTCGCACTGCTTTACTTTGAAATTGTCAGTACCATCGCGCTGATTATTGGTCTTATCATCGTTAACGTCGTGCAGCCTGGTGCCGGAATGAACGTCGATCCGGCAACGCTTGATGCGAAAGCGGTAGCGGTTTACGCCGATCAGGCGAAAGACCAGGGCATTGTCGCCTTCATTATGGATGTCATCCCGGCGAGCGTCATTGGCGCATTTGCCAGCGGTAACATTCTGCAGGTGCTGCTGTTTGCCGTACTGTTTGGTTTTGCGCTCCACCGTCTGGGCAGCAAAGGCCAACTGATTTTTAACGTCATCGAAAGTTTCTCGCAGGTCATCTTCGGCATCATCAATATGATCATGCGTCTGGCACCTATTGGTGCGTTCGGGGCAATGGCGTTTACCATCGGTAAATACGGCGTCGGCACACTGGTGCAACTGGGGCAGCTGATTATCTGTTTCTACATTACCTGTATCCTGTTTGTGGTGCTGGTATTGGGTTCAATCGCTAAAGCGACTGGTTTCAGTATCTTCAAATTTATCCGCTACATCCGTGAAGAACTGCTGATTGTACTGGGGACTTCATCTTCCGAGTCGGCGCTGCCGCGTATGCTCGACAAGATGGAGAAACTCGGCTGCCGTAAATCGGTGGTGGGGCTGGTCATCCCGACAGGCTACTCGTTTAACCTTGATGGCACATCGATATACCTGACAATGGCGGCGGTGTTTATCGCCCAGGCCACTAACAGTCAGATGGATATCGTCCACCAAATCACGCTGTTAATCGTGTTGCTGCTTTCTTCTAAAGGGGCGGCAGGGGTAACGGGTAGTGGCTTTATCGTGCTGGCGGCGACGCTCTCTGCGGTGGGCCATTTGCCGGTAGCGGGTCTGGCGCTGATCCTCGGTATCGACCGCTTTATGTCAGAAGCTCGTGCGCTGACTAACCTGGTCGGTAACGGCGTAGCGACCATTGTCGTTGCTAAGTGGGTGAAAGAACTGGACCACAAAAAACTGGACGATGTGCTGAATAATCGTGCGCCGGATGGCAAAACGCACGAATTATCCTCTTAA", + "dna_sequence_length": 1287, + "functions": [ + "C4-dicarboxylic acid, orotate and citrate transporter" + ], + "id": "CDS_3465", + "location": [ + [ + "NC_000913", + 3683447, + "-", + 1287 + ] + ], + "md5": "94d546909afbf89bc4ad52875b89dd65", + "parent_gene": "", + "protein_md5": "db885011d46d91b8651a954e01f487be", + "protein_translation": "MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011533" + ], + [ + "gene_synonym", + "ECK3514" + ], + [ + "gene_synonym", + "EcoGene:EG12256" + ], + [ + "gene_synonym", + "GI:226524755" + ], + [ + "gene_synonym", + "GeneID:948048" + ], + [ + "gene_synonym", + "JW5943" + ], + [ + "gene_synonym", + "NP_417986.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37649" + ], + [ + "gene_synonym", + "b3529" + ], + [ + "gene_synonym", + "yhjK" + ] + ], + "dna_sequence": "TTGCGCGTAAGTCGCTCGTTAACAATCAAGCAGATGGCAATGGTGGCAGCCGTTGTCCTGGTGTTCGTTTTTATTTTTTGCACCGTTTTGCTGTTCCATCTGGTCCAGCAGAATCGCTATAACACGGCTACGCAACTGGAAAGCATTGCTCGCTCTGTCCGCGAACCCTTATCTTCAGCTATTTTGAAAGGCGATATTCCCGAAGCGGAAGCTATTCTTGCCAGCATTAAACCGGCAGGCGTGGTCAGCCGTGCCGATGTAGTGCTGCCTAACCAGTTCCAGGCGCTGCGTAAAAGTTTTATTCCAGAGCGCCCGGTGCCGGTAATGGTTACTCGCCTGTTTGAGCTACCGGTTCAAATCTCGCTGGGCGTTTACTCGCTCGAACGTCCGGCAAACCCGCAGCCAATTGCCTATCTGGTACTACAGGCGGATTCCTTCCGTATGTATAAGTTCGTGATGAGCACCCTCTCAACGTTAGTGACCATTTACTTACTTTTGTCGCTTATCCTGACCGTCGCCATCAGCTGGTGCATTAACCGCCTGATTTTGCATCCGTTACGCAATATTGCTCGCGAACTTAACGCCATCCCAGCCAAGGAGCTTGTTGGTCACCAACTGGCATTACCGCGTCTGCATCAGGACGATGAAATCGGTATGTTGGTGCGCAGTTACAACCTCAACCAGCAATTGCTGCAGCGCCATTATGAAGAACAGAACGAAAATGCGATGCGCTTCCCGGTGTCGGATTTGCCGAACAAAGCCTTGCTGATGGAGATGCTGGAGCAGGTTGTCGCGCGTAAACAAACCACCGCGCTGATGATCATCACCTGTGAAACCCTGCGTGATACTGCGGGCGTGCTGAAAGAGGCGCAACGAGAAATTCTGCTGCTGACGCTGGTGGAAAAACTCAAATCGGTACTGTCGCCACGTATGATCCTCGCGCAGATTAGCGGTTATGACTTTGCTGTCATTGCCAACGGTGTACAGGAACCGTGGCACGCAATCACCTTAGGTCAGCAAGTGCTCACTATCATGAGCGAGCGCCTGCCGATTGAACGTATTCAACTCCGTCCGCACTGTAGCATTGGCGTGGCGATGTTCTACGGCGATCTCACCGCCGAACAGCTTTACAGTCGCGCTATTTCTGCGGCATTTACCGCTCGCCATAAAGGCAAGAATCAGATTCAGTTCTTTGATCCGCAGCAGATGGAAGCCGCCCAGAAGCGGTTGACGGAAGAGAGCGATATCCTTAATGCACTGGAAAATCATCAGTTTGCTATTTGGTTACAGCCACAGGTCGAGATGACCAGCGGTAAACTGGTCAGTGCGGAAGTGTTACTGCGTATCCAGCAACCGGATGGCAGTTGGGACCTGCCGGATGGCTTAATCGATCGCATTGAGTGCTGTGGGCTGATGGTTACCGTCGGTCACTGGGTGCTGGAAGAGTCCTGTCGATTGCTTGCAGCCTGGCAAGAGCGCGGCATTATGCTGCCCTTGTCGGTAAACCTCTCTGCGCTGCAACTGATGCACCCGAATATGGTGGCGGATATGCTGGAACTGTTAACCCGCTATCGCATTCAGCCGGGAACACTGATTCTGGAAGTGACAGAAAGCCGACGTATTGACGACCCTCATGCTGCGGTGGCAATCCTCCGTCCGCTGCGCAATGCCGGAGTTCGGGTGGCGCTGGATGATTTCGGCATGGGCTACGCAGGGCTGCGTCAGCTGCAGCATATGAAATCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGCACAACGCGACTGGCTGGCAAAAGCGGGCGTTGGTATTGCCCAGGGCTTCCTTTTTGCTCGCCCACTCCCTATTGAAATCTTCGAAGAGAGTTACCTGGAAGAAAAGTAG", + "dna_sequence_length": 1989, + "functions": [ + "cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_3466", + "location": [ + [ + "NC_000913", + 3685618, + "-", + 1989 + ] + ], + "md5": "4c85e1799f95c2b1c874124f3bcdca60", + "parent_gene": "", + "protein_md5": "f5656441168bce83484e9f284069b027", + "protein_translation": "MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK", + "protein_translation_length": 662, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011538" + ], + [ + "gene_synonym", + "ECK3515" + ], + [ + "gene_synonym", + "EcoGene:EG12257" + ], + [ + "gene_synonym", + "GI:226524756" + ], + [ + "gene_synonym", + "GeneID:948047" + ], + [ + "gene_synonym", + "JW5942" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37650" + ], + [ + "gene_synonym", + "YP_026226.4" + ], + [ + "gene_synonym", + "b3530" + ], + [ + "gene_synonym", + "bcsC" + ], + [ + "gene_synonym", + "yhjL" + ] + ], + "dna_sequence": "ATGCGCAAATTCACACTAAACATATTCACGCTTTCCCTCGGTCTGGCCGTCATGCCGATGGTCGAGGCAGCACCAACCGCTCAGCAACAGTTGCTGGAGCAAGTTCGGTTAGGCGAAGCGACCCATCGTGAAGATCTGGTGCAACAGTCGTTATATCGGCTGGAACTTATTGATCCGAATAACCCGGACGTCGTTGCCGCCCGTTTCCGTTCTTTGTTACGTCAGGGCGATATTGATGGCGCGCAAAAACAGCTCGATCGGCTGTCGCAGTTAGCGCCGAGTTCAAATGCGTATAAATCGTCGCGGACTACGATGCTACTTTCCACGCCGGATGGTCGTCAGGCACTGCAACAGGCACGATTGCAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATTAATCAGTTAAAACGCATCAATGCGGATGCACCGGGCAATACGGGCCTGCAAAACAATCTGGCGCTATTGCTGTTTAGTAGCGATCGCCGTGACGAAGGTTTTGCCGTCCTGGAACAGATGGCAAAATCGAACGCCGGGCGCGAAGGGGCCTCTAAAATCTGGTACGGGCAGATTAAAGACATGCCCGTCAGTGATGCCAGTGTGTCGGCGCTGAAAAAATATCTCTCGATCTTTAGTGATGGCGATAGCGTGGCGGCTGCGCAATCGCAACTGGCAGAACAGCAAAAACAGCTGGCCGATCCTGCTTTCCGCGCTCGTGCGCAAGGTTTAGCGGCGGTGGACTCTGGTATGGCGGGTAAAGCCATTCCCGAACTACAACAGGCGGTGCGGGCGAACCCGAAAGACAGTGAAGCTCTGGGGGCGCTGGGCCAGGCGTATTCTCAGAAAGGCGATCGCGCCAATGCAGTGGCGAATCTGGAAAAAGCCCTCGCACTGGACCCGCACAGCAGCAACAACGACAAATGGAACAGTCTGCTGAAAGTAAACCGCTACTGGCTGGCGATCCAGCAGGGCGATGCTGCGCTGAAAGCCAATAATCCTGACCGGGCAGAACGCCTGTTCCAGCAGGCGCGTAATGTCGATAACACCGACAGTTATGCAGTGCTGGGGCTGGGCGATGTGGCGATGGCGCGAAAAGATTATCCCGCCGCCGAACGTTATTATCAGCAGACCTTGCGTATGGACAGCGGCAACACTAACGCCGTGCGCGGGCTGGCAAATATTTACCGCCAGCAATCGCCAGAAAAAGCTGAAGCGTTTATCGCCTCGCTCTCTGCCAGTCAGCGGCGTAGCATTGATGATATCGAACGCAGCCTGCAAAACGACCGTCTGGCACAGCAGGCAGAGGCACTGGAAAACCAGGGCAAATGGGCGCAGGCGGCAGCACTTCAGCGGCAACGACTGGCGCTGGACCCCGGCAGCGTATGGATTACTTACCGACTTTCGCAGGATCTCTGGCAGGCCGGACAACGCAGCCAGGCCGATACGTTAATGCGCAATCTGGCGCAGCAGAAGTCGAACGACCCGGAGCAGGTTTACGCTTACGGGCTGTACCTCTCTGGTCATGACCAGGACAGAGCGGCGCTGGCGCATATCAATAGCCTGCCGCGTGCGCAGTGGAACAGCAATATTCAGGAGCTGGTTAATCGACTGCAAAGCGATCAGGTGCTGGAAACCGCTAACCGCCTGCGAGAAAGCGGCAAAGAGGCAGAAGCGGAAGCGATGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCGGCGCGTGGCGCTGGCACAGGCGCAGCTTGGCGATACCGCAGCAGCGCAGCGGACGTTTAATAAGTTGATCCCGCAGGCAAAATCTCAGCCACCGTCGATGGAAAGCGCGATGGTGCTGCGTGATGGTGCGAAGTTTGAAGCGCAGGCGGGCGATCCAACGCAGGCGCTGGAAACCTACAAAGACGCCATGGTCGCATCCGGTGTGACTACGACGCGTCCGCAGGATAACGACACCTTTACCCGACTGACCCGTAACGACGAGAAAGATGACTGGCTGAAACGTGGCGTGCGCAGCGATGCGGCGGACCTCTATCGCCAGCAGGATCTTAACGTCACCCTTGAGCACGATTACTGGGGTTCGAGCGGCACCGGTGGTTACTCCGATCTGAAAGCGCACACTACCATGTTGCAGGTGGATGCGCCGTATTCTGACGGGCGGATGTTCTTTCGCAGTGATTTCGTCAATATGAACGTCGGCAGTTTCTCCACTAATGCCGATGGCAAATGGGATGACAACTGGGGCACCTGTACATTACAGGACTGTAGCGGCAACCGCAGCCAGTCGGATTCCGGTGCCAGCGTGGCGGTCGGCTGGCGAAATGACGTCTGGAGCTGGGATATCGGTACCACGCCGATGGGCTTCAACGTGGTGGATGTGGTCGGCGGCATCAGTTACAGCGATGATATCGGGCCGCTGGGTTACACCGTTAACGCCCACCGTCGGCCCATCTCCAGTTCTTTGCTGGCCTTTGGTGGGCAAAAAGACTCCCCGAGCAATACCGGGAAAAAATGGGGTGGCGTACGTGCCGACGGTGTGGGGCTAAGTCTGAGCTACGATAAAGGTGAAGCAAACGGCGTCTGGGCATCGCTTAGTGGCGACCAGTTAACCGGTAAAAATGTCGAAGATAACTGGCGCGTGCGCTGGATGACGGGCTATTACTATAAGGTCATTAACCAGAACAATCGCCGCGTCACAATCGGCCTGAACAACATGATCTGGCATTACGACAAAGATCTGAGTGGCTACTCACTCGGTCAGGGCGGTTACTACAGTCCGCAGGAATACCTGTCGTTTGCCATACCGGTGATGTGGCGGGAGCGCACGGAAAACTGGTCGTGGGAGCTGGGTGCGTCTGGCTCGTGGTCGCATTCACGCACCAAAACCATGCCGCGTTATCCGCTGATGAATCTGATCCCGACCGACTGGCAGGAAGAAGCTGCGCGGCAATCCAACGATGGCGGCAGCAGTCAGGGCTTCGGCTACACGGCGCGGGCATTACTTGAACGACGTGTTACTTCCAACTGGTTTGTTGGCACGGCAATTGATATCCAGCAGGCGAAAGATTACGCACCCAGCCATTTCCTGCTCTACGTACGTTATTCCGCCGCCGGATGGCAGGGTGACATGGATTTACCGCCGCAGCCGCTGATACCTTACGCCGACTGGTAA", + "dna_sequence_length": 3474, + "functions": [ + "cellulose synthase subunit" + ], + "id": "CDS_3467", + "location": [ + [ + "NC_000913", + 3689173, + "-", + 3474 + ] + ], + "md5": "11c5590384eb8f5a83557ea0f00ff915", + "parent_gene": "", + "protein_md5": "a2cf4e51ab284c2df5700a6623076f93", + "protein_translation": "MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPNNPDVVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQARLQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADAPGNTGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSALKKYLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDPEQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKSQPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAMVASGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYRQQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDGGSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGDMDLPPQPLIPYADW", + "protein_translation_length": 1157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011541" + ], + [ + "gene_synonym", + "ECK3516" + ], + [ + "gene_synonym", + "EcoGene:EG12258" + ], + [ + "gene_synonym", + "GI:16131403" + ], + [ + "gene_synonym", + "GeneID:948046" + ], + [ + "gene_synonym", + "JW3499" + ], + [ + "gene_synonym", + "NP_417988.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37651" + ], + [ + "gene_synonym", + "b3531" + ], + [ + "gene_synonym", + "bcsC" + ], + [ + "gene_synonym", + "bcsZ" + ], + [ + "gene_synonym", + "yhjM" + ] + ], + "dna_sequence": "ATGAATGTGTTGCGTAGTGGAATCGTGACGATGCTGCTGCTGGCTGCCTTTAGTGTTCAGGCAGCCTGTACCTGGCCTGCCTGGGAGCAGTTTAAAAAGGATTACATCAGTCAGGAAGGGCGCGTCATCGACCCCAGCGACGCGCGCAAAATCACCACCTCCGAAGGGCAAAGTTACGGCATGTTCTCTGCCCTGGCGGCTAACGACCGTGCAGCTTTCGATAATATTCTCGACTGGACGCAGAACAATCTCGCTCAGGGTTCTTTAAAAGAACGTTTGCCCGCCTGGCTGTGGGGCAAGAAAGAGAACAGTAAGTGGGAAGTGCTGGACAGCAATTCGGCCTCCGATGGTGATGTCTGGATGGCCTGGTCGTTGCTGGAGGCGGGGCGTTTGTGGAAAGAGCAGCGTTATACCGACATCGGCAGCGCGTTGCTAAAACGTATCGCGCGGGAGGAAGTGGTGACGGTGCCTGGGCTGGGTTCCATGTTGTTACCGGGCAAAGTGGGTTTTGCTGAGGATAACAGCTGGCGTTTTAACCCCAGCTACCTGCCGCCGACGCTGGCGCAGTATTTCACCCGCTTTGGCGCGCCGTGGACCACGCTGCGCGAAACCAATCAACGTTTATTGCTGGAAACCGCCCCGAAAGGTTTTTCGCCAGACTGGGTGCGCTATGAGAAAGACAAAGGCTGGCAGCTAAAAGCCGAAAAAACATTGATCAGCAGCTACGACGCTATCCGCGTTTACATGTGGGTAGGCATGATGCCTGACAGCGATCCGCAAAAAGCGCGGATGCTCAACCGGTTTAAACCGATGGCGACATTCACTGAGAAAAACGGTTATCCGCCGGAAAAAGTGGATGTGGCTACGGGGAAAGCGCAGGGTAAAGGACCAGTCGGTTTTTCTGCCGCCATGCTGCCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCGTGGCCGATAACTTTCCCGGCAGCGATGCCTATTACAACTATGTGCTGACCCTGTTTGGACAAGGCTGGGATCAACACCGTTTCCGCTTCTCGACAAAAGGTGAGTTATTACCTGACTGGGGCCAGGAATGCGCAAATTCACACTAA", + "dna_sequence_length": 1107, + "functions": [ + "endo-1,4-D-glucanase" + ], + "id": "CDS_3468", + "location": [ + [ + "NC_000913", + 3690261, + "-", + 1107 + ] + ], + "md5": "d8793093ea7609ff15bf5f9476e9deec", + "parent_gene": "", + "protein_md5": "7eb98f05ae6512139ad72350ab25dbdf", + "protein_translation": "MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011545" + ], + [ + "gene_synonym", + "ECK3517" + ], + [ + "gene_synonym", + "EcoGene:EG12259" + ], + [ + "gene_synonym", + "GI:16131404" + ], + [ + "gene_synonym", + "GeneID:948045" + ], + [ + "gene_synonym", + "JW3500" + ], + [ + "gene_synonym", + "NP_417989.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37652" + ], + [ + "gene_synonym", + "b3532" + ], + [ + "gene_synonym", + "bcsB" + ], + [ + "gene_synonym", + "yhjN" + ] + ], + "dna_sequence": "ATGAAAAGAAAACTATTCTGGATTTGTGCAGTGGCTATGGGGATGAGTGCGTTCCCCTCTTTCATGACGCAGGCGACGCCAGCAACGCAACCACTGATCAATGCTGAGCCAGCTGTAGCCGCCCAGACGGAACAAAATCCGCAGGTGGGGCAAGTGATGCCGGGCGTGCAGGGCGCTGATGCGCCAGTCGTGGCGCAGAACGGTCCTTCGCGTGATGTGAAGCTGACCTTTGCGCAAATTGCACCGCCGCCGGGCAGCATGGTGCTACGTGGCATTAACCCGAACGGCAGCATTGAGTTTGGTATGCGCAGCGATGAAGTGGTGACGAAGGCGATGCTCAACCTCGAATACACCCCATCGCCATCGTTACTGCCTGTCCAGTCGCAGTTAAAGGTTTATCTCAATGATGAACTGATGGGCGTGCTGCCAGTGACCAAAGAACAGTTGGGTAAAAAAACGCTGGCGCAAATGCCCATTAACCCACTGTTTATTAGCGACTTCAACCGTGTACGGCTGGAGTTTGTCGGCCATTATCAGGACGTGTGCGAAAAACCGGCCAGCACCACGCTTTGGCTGGATGTTGGGCGGAGCAGTGGACTGGATCTGACCTATCAGACCCTGAATGTGAAGAATGACCTGTCACACTTCCCGGTGCCATTCTTTGACCCGAGCGATAACCGCACCAACACCTTGCCGATGGTCTTTGCGGGTGCGCCGGATGTTGGGCTGCAACAAGCCTCTGCCATTGTCGCCTCGTGGTTTGGTTCGCGTTCTGGCTGGCGTGGGCAGAACTTCCCGGTACTCTATAACCAACTGCCGGATCGCAATGCCATTGTCTTTGCAACCAACGACAAACGGCCGGACTTCCTGCGCGATCATCCGGCGGTAAAAGCCCCGGTGATTGAGATGATTAACCATCCGCAGAATCCTTACGTCAAACTGCTGGTGGTGTTTGGTCGTGACGACAAAGACCTGTTGCAGGCAGCGAAAGGTATCGCTCAGGGTAACATTCTGTTCCGTGGTGAAAGCGTGGTAGTGAATGAAGTGAAACCGCTGCTACCGCGTAAGCCGTACGATGCGCCGAACTGGGTACGTACCGATCGTCCGGTCACATTTGGCGAACTGAAAACCTATGAAGAACAGTTACAATCCAGCGGTCTTGAGCCAGCAGCGATTAACGTTTCGCTAAACCTGCCGCCGGATCTCTACCTGATGCGCAGTACCGGCATTGATATGGATATTAATTACCGCTACACCATGCCGCCGGTGAAAGACAGTTCGCGGATGGATATCAGCCTGAATAACCAGTTCCTGCAATCCTTCAACCTGAGCAGCAAACAGGAGGCGAACCGCCTGCTGCTGCGGATTCCGGTATTACAAGGTTTGCTGGATGGCAAAACAGATGTCTCTATTCCGGCGCTGAAACTGGGCGCGACCAACCAGCTGCGCTTCGACTTTGAGTATATGAACCCGATGCCGGGCGGTTCGGTGGATAACTGTATTACCTTCCAGCCGGTGCAGAATCATGTGGTGATTGGTGACGACTCCACCATCGACTTCTCGAAGTATTACCACTTCATCCCGATGCCGGATCTACGCGCCTTTGCTAACGCGGGCTTCCCATTCAGCCGGATGGCGGATCTGTCGCAAACCATCACCGTGATGCCGAAAGCGCCTAACGAAGCACAGATGGAAACGTTGCTGAATACTGTTGGTTTTATCGGCGCACAGACGGGCTTCCCGGCGATTAATCTGACGGTGACCGATGATGGCAGCACCATTCAGGGCAAAGATGCCGACATCATGATCATCGGTGGTATCCCGGACAAACTGAAAGACGATAAGCAGATCGACCTATTGGTGCAGGCGACCGAAAGCTGGGTGAAAACACCGATGCGCCAGACCCCGTTCCCCGGCATTGTGCCGGACGAGAGCGATCGCGCGGCAGAAACCCGGTCAACGCTGACCTCTTCCGGTGCGATGGCGGCGGTGATTGGCTTCCAGTCGCCGTATAACGACCAGCGCAGCGTGATTGCGCTGTTGGCAGATAGCCCACGCGGTTATGAAATGCTTAACGATGCGGTGAACGATAGCGGCAAACGCGCCACCATGTTCGGTTCGGTCGCGGTGATCCGCGAGTCCGGTATCAACAGCCTACGTGTTGGCGACGTTTATTACGTAGGTCATCTGCCGTGGTTCGAGCGCGTGTGGTATGCGCTGGCAAACCATCCGATTCTGCTGGCGGTGCTGGCGGCTATCAGTGTGATATTGCTGGCATGGGTACTGTGGCGTCTGCTGCGAATTATTAGTCGTCGTCGTCTTAACCCGGATAACGAGTAA", + "dna_sequence_length": 2340, + "functions": [ + "regulator of cellulose synthase, cyclic di-GMP binding" + ], + "id": "CDS_3469", + "location": [ + [ + "NC_000913", + 3692607, + "-", + 2340 + ] + ], + "md5": "1b75c0623039eefd1160a82e1de315b8", + "parent_gene": "", + "protein_md5": "f2a31ba4537d45216285d2c08005814a", + "protein_translation": "MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFISDFNRVRLEFVGHYQDVCEKPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPSDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE", + "protein_translation_length": 779, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011547" + ], + [ + "gene_synonym", + "ECK3518" + ], + [ + "gene_synonym", + "EcoGene:EG12260" + ], + [ + "gene_synonym", + "GI:90111609" + ], + [ + "gene_synonym", + "GeneID:948053" + ], + [ + "gene_synonym", + "JW5665" + ], + [ + "gene_synonym", + "NP_417990.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37653" + ], + [ + "gene_synonym", + "b3533" + ], + [ + "gene_synonym", + "bcsA" + ], + [ + "gene_synonym", + "yhjO" + ], + [ + "gene_synonym", + "yhjP" + ] + ], + "dna_sequence": "ATGAGTATCCTGACCCGGTGGTTGCTTATCCCGCCGGTCAACGCGCGGCTTATCGGGCGTTATCGCGATTATCGTCGTCACGGTGCGTCGGCTTTCAGCGCGACGCTCGGCTGTTTCTGGATGATCCTGGCCTGGATTTTTATTCCGCTGGAGCACCCGCGCTGGCAGCGTATTCGCGCAGAACATAAAAACCTGTATCCGCATATCAACGCCTCGCGTCCGCGTCCGCTGGACCCGGTCCGTTATCTCATTCAAACATGCTGGTTATTGATCGGTGCATCGCGCAAAGAAACGCCGAAACCGCGCAGGCGGGCATTTTCAGGTCTGCAAAATATTCGTGGACGTTACCATCAATGGATGAACGAGCTGCCTGAGCGCGTTAGCCATAAAACACAGCATCTGGATGAGAAAAAAGAGCTCGGTCATTTGAGTGCCGGGGCGCGGCGGTTGATCCTCGGTATCATCGTCACCTTCTCGCTGATTCTGGCGTTAATCTGCGTTACTCAGCCGTTTAACCCGCTGGCGCAGTTTATCTTCCTGATGCTGCTGTGGGGGGTAGCGCTGATCGTACGGCGGATGCCGGGGCGCTTCTCGGCGCTAATGTTGATTGTGCTGTCGCTGACCGTTTCTTGCCGTTATATCTGGTGGCGTTACACCTCTACGCTGAACTGGGACGATCCGGTCAGCCTGGTGTGCGGGCTTATTCTGCTCTTCGCTGAAACGTACGCGTGGATTGTGCTGGTGCTCGGCTACTTCCAGGTAGTATGGCCGCTGAATCGTCAGCCGGTGCCATTGCCGAAAGATATGTCGCTGTGGCCGTCGGTGGATATCTTTGTCCCGACTTACAACGAAGATCTCAACGTGGTGAAAAATACCATTTACGCCTCGCTGGGTATCGACTGGCCGAAAGATAAGCTGAATATCTGGATCCTTGATGACGGCGGCAGGGAAGAGTTTCGCCAGTTTGCGCAAAACGTGGGGGTGAAATATATCGCCCGCACCACTCATGAACATGCGAAAGCAGGCAACATCAACAATGCGCTGAAATATGCCAAAGGCGAGTTCGTGTCGATTTTCGACTGCGACCACGTACCAACGCGATCGTTCTTGCAAATGACCATGGGCTGGTTCCTGAAAGAAAAACAGCTGGCGATGATGCAGACGCCGCACCACTTCTTCTCACCGGACCCGTTTGAACGCAACCTGGGGCGTTTCCGTAAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGATGGCAACGATATGTGGGACGCCACTTTCTTCTGCGGTTCCTGTGCGGTGATTCGTCGTAAGCCGCTGGATGAAATTGGCGGCATTGCTGTCGAAACCGTGACTGAAGATGCGCATACTTCTCTGCGGTTGCACCGTCGTGGCTATACCTCCGCGTATATGCGTATTCCGCAGGCGGCGGGGCTGGCGACCGAAAGTCTGTCGGCGCATATCGGTCAGCGTATTCGCTGGGCGCGCGGGATGGTACAAATCTTCCGTCTCGATAACCCGCTCACCGGTAAAGGGCTGAAGTTTGCTCAGCGGCTATGTTACGTCAACGCCATGTTCCACTTCTTGTCGGGCATTCCACGGCTGATCTTCCTGACTGCGCCGCTGGCGTTCCTGCTGCTTCATGCCTACATCATCTATGCGCCAGCGTTGATGATCGCCCTATTCGTGCTGCCGCATATGATCCATGCCAGCCTGACCAACTCCAAGATCCAGGGCAAATATCGCCACTCTTTCTGGAGTGAAATCTACGAAACGGTGCTGGCGTGGTATATCGCACCACCGACGCTGGTGGCGCTGATTAACCCGCACAAAGGCAAATTTAACGTCACCGCCAAAGGTGGACTGGTGGAAGAAGAGTACGTCGACTGGGTGATCTCGCGGCCCTACATCTTCCTTGTCCTGCTCAACCTGGTGGGCGTTGCGGTAGGCATCTGGCGCTACTTCTATGGCCCGCCAACCGAGATGCTCACCGTGGTCGTCAGTATGGTGTGGGTGTTCTACAACCTGATTGTTCTTGGCGGCGCAGTTGCGGTATCGGTAGAAAGCAAACAGGTACGCCGATCGCACCGCGTGGAGATGACGATGCCCGCGGCAATTGCCCGCGAAGATGGTCACCTCTTCTCGTGTACCGTTCAGGATTTCTCCGACGGTGGTTTGGGGATCAAGATCAACGGTCAGGCGCAGATTCTGGAAGGGCAGAAAGTGAATCTGTTGCTTAAACGCGGTCAGCAGGAATACGTCTTCCCGACCCAGGTGGCGCGCGTGATGGGTAATGAAGTTGGGCTGAAATTAATGCCGCTCACCACCCAGCAACATATCGATTTTGTGCAGTGTACGTTTGCCCGTGCGGATACATGGGCGCTCTGGCAGGACAGCTACCCGGAAGATAAGCCGCTGGAAAGTCTGCTGGATATTCTGAAGCTCGGCTTCCGTGGCTACCGCCATCTGGCGGAGTTTGCGCCTTCTTCGGTGAAGGGCATATTCCGTGTGCTGACTTCTCTGGTTTCCTGGGTTGTATCGTTTATTCCGCGCCGCCCGGAGCGGAGCGAAACGGCACAACCATCGGATCAGGCTTTGGCTCAACAATGA", + "dna_sequence_length": 2619, + "functions": [ + "cellulose synthase, catalytic subunit" + ], + "id": "CDS_3470", + "location": [ + [ + "NC_000913", + 3695236, + "-", + 2619 + ] + ], + "md5": "838ddc2c43eb35e22461afb85eafee5c", + "parent_gene": "", + "protein_md5": "3a933a9a1983667b0c9aa7ab83f83c9b", + "protein_translation": "MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILAWIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPRRRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTHEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVLGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWALWQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFIPRRPERSETAQPSDQALAQQ", + "protein_translation_length": 872, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011549" + ], + [ + "gene_synonym", + "ECK3519" + ], + [ + "gene_synonym", + "EcoGene:EG12261" + ], + [ + "gene_synonym", + "GeneID:948052" + ], + [ + "gene_synonym", + "JW5941" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37655" + ], + [ + "gene_synonym", + "b3534" + ], + [ + "gene_synonym", + "bcsQ" + ], + [ + "gene_synonym", + "yhjQ" + ] + ], + "dna_sequence": "ATGGCCGTACTGGGATAGCAGGGGGTGCGGGGAGGCGTGGGGACAACAACCATCACCGCCGCATTAGCCTGGTCATTACAAATGTTGGGAGAAAATGTCCTGGTGGTCGATGCCTGCCCGGACAACTTGTTGCGCCTGTCATTTAATGTTGATTTTACCCACCGTCAGGGCTGGGCCAGAGCGATGCTGGATGGCCAGGACTGGCGTGACGCTGGGTTGCGCTACACCTCGCAGCTCGATTTGCTGCCTTTTGGTCAGTTATCCATTGAAGAACAAGAAAATCCACAGCACTGGCAAACCCGGCTGAGCGATATTTGCTCCGGCTTACAGCAACTAAAAGCCAGCGGGCGTTACCAGTGGATTTTAATCGACTTACCGCGTGATGCCTCGCAGATAACCCACCAGCTGCTGAGTTTGTGCGATCACTCGCTGGCAATCGTCAATGTGGATGCCAACTGCCATATCCGACTGCATCAGCAAGCGCTGCCGGATGGCGCACATATTTTGATTAATGACTTCCGTATTGGCAGTCAGGTTCAGGACGATATTTACCAGCTTTGGTTGCAAAGCCAGCGCCGATTACTGCCGATGCTCATTCATCGTGATGAAGCGATGGCTGAATGCCTGGCGGCTAAGCAACCAGTAGGTGAATATCGCAGTGATGCGCTGGCGGCTGAAGAGATACTGACGCTGGCGAACTGGTGCCTGTTGAACTACTCCGGGCTGAAAACGCCAGTCGGGAGTGCATCATGA", + "dna_sequence_length": 753, + "id": "CDS_3471", + "location": [ + [ + "NC_000913", + 3695985, + "-", + 753 + ] + ], + "md5": "4d04dd3d8567e2f48340336f6252dd32", + "parent_gene": "", + "protein_md5": "1d6bea9395764fe5347127a1d64541c2", + "protein_translation": "MAVLG", + "protein_translation_length": 5, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011551" + ], + [ + "gene_synonym", + "ECK3520" + ], + [ + "gene_synonym", + "EcoGene:EG12262" + ], + [ + "gene_synonym", + "GI:16131407" + ], + [ + "gene_synonym", + "GeneID:948051" + ], + [ + "gene_synonym", + "JW3503" + ], + [ + "gene_synonym", + "NP_417992.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADJ3" + ], + [ + "gene_synonym", + "b3535" + ], + [ + "gene_synonym", + "yhjR" + ] + ], + "dna_sequence": "ATGAATAACAATGAACCAGATACTCTGCCTGATCCCGCGATAGGCTATATCTTCCAGAATGATATTGTGGCGTTAAAGCAGGCATTTTCACTGCCTGATATTGATTATGCCGATATTTCCCAACGCGAACAGTTGGCCGCGGCATTAAAACGCTGGCCGTTGCTGGCAGAGTTTGCGCAACAAAAGTAG", + "dna_sequence_length": 189, + "functions": [ + "DUF2629 family protein" + ], + "id": "CDS_3472", + "location": [ + [ + "NC_000913", + 3696185, + "-", + 189 + ] + ], + "md5": "c41717518bb9ab73e04d18ccdf71af67", + "parent_gene": "", + "protein_md5": "3182779ec3aa941370f3cd412da99001", + "protein_translation": "MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQQK", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011554" + ], + [ + "gene_synonym", + "ECK3521" + ], + [ + "gene_synonym", + "EcoGene:EG12263" + ], + [ + "gene_synonym", + "GI:16131408" + ], + [ + "gene_synonym", + "GeneID:948050" + ], + [ + "gene_synonym", + "JW3504" + ], + [ + "gene_synonym", + "NP_417993.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37657" + ], + [ + "gene_synonym", + "b3536" + ], + [ + "gene_synonym", + "bcsE" + ], + [ + "gene_synonym", + "yhjS" + ] + ], + "dna_sequence": "ATGAGGGACATTGTGGACCCTGTATTCTCTATCGGTATCTCATCATTATGGGATGAGCTGCGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGGAAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCTTTTTATTCTTGTTTGCGCAAATAACGCATGGCAAAACATTCCTGCCGAGCGGCTTCGCTCATGGTTGGATAAAATGAATAAATGGAGCAGGTTAAACCATTGTTCGCTTTTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTGTTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGCCAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTTCTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGCAGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAAGCGAAGAGGCGGAGATCCAACCACGCAGCGACGAAAAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCGCTATCGGAACACTGGCAACTGTTCAACAATAACGAAGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGTCTTTTCTTTACAGCAAAATGCGCAAATCGAGCCACTGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGATGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTGCGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATGGTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCTGACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGTGCCGGAAGATATCACTACCTTGCTGTCAATGACCCAGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTAATGCCGTCAACAACATGATGAATAACCCTCTATTACCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCGGGTATCCGCGTTGAACAAGCCCTGACGCTGTGTCGCCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCTGGTGCTGTTTCTCTCATTCTGTCGGATTAACGATCTGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACATTTTCTCAAACCGTATGGTCTGGTTTGAAGATGATCAAATCAGTGCCGAGCTGGTGCAGATGCGCTTGCTTGCCCCAGAACAATGGGGCATGCCGCTGCCTTTAACGCAAAGTTCTAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACGAATACCAGAACCCATGCGACTGTTAGATGATGCTGTGGAGCGCTCATCATGA", + "dna_sequence_length": 1572, + "functions": [ + "cellulose production protein" + ], + "id": "CDS_3473", + "location": [ + [ + "NC_000913", + 3696458, + "+", + 1572 + ] + ], + "md5": "2c1073f3f04e1f33266c486ba23eb4c9", + "parent_gene": "", + "protein_md5": "e6e290341d850c93d35ca225f5dbd8b2", + "protein_translation": "MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS", + "protein_translation_length": 523, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011556" + ], + [ + "gene_synonym", + "ECK3522" + ], + [ + "gene_synonym", + "EcoGene:EG12264" + ], + [ + "gene_synonym", + "GI:90111610" + ], + [ + "gene_synonym", + "GeneID:948059" + ], + [ + "gene_synonym", + "JW5663" + ], + [ + "gene_synonym", + "NP_417994.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADJ5" + ], + [ + "gene_synonym", + "b3537" + ], + [ + "gene_synonym", + "bcsF" + ], + [ + "gene_synonym", + "yhjT" + ] + ], + "dna_sequence": "ATGATGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCTTTGCGACGCATTCGCGACACCTTACGTTTGTTCTTTGCTAAACCTCGTTATGTTAAACCGGCCGGGACGTTACGCCGCACGGAAAAAGCCAGGGCAACCAAAAAATGA", + "dna_sequence_length": 192, + "functions": [ + "DUF2636 family cellulose production small membrane protein" + ], + "id": "CDS_3474", + "location": [ + [ + "NC_000913", + 3698026, + "+", + 192 + ] + ], + "md5": "a58b47d10a58c9618e4195c7070d564d", + "parent_gene": "", + "protein_md5": "2e6477a5828faa4bb31e32492e007a94", + "protein_translation": "MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARATKK", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011558" + ], + [ + "gene_synonym", + "ECK3523" + ], + [ + "gene_synonym", + "EcoGene:EG12265" + ], + [ + "gene_synonym", + "GI:16131410" + ], + [ + "gene_synonym", + "GeneID:948058" + ], + [ + "gene_synonym", + "JW3506" + ], + [ + "gene_synonym", + "NP_417995.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37659" + ], + [ + "gene_synonym", + "b3538" + ], + [ + "gene_synonym", + "bcsG" + ], + [ + "gene_synonym", + "yhjU" + ] + ], + "dna_sequence": "ATGACTCAATTTACGCAAAATACCGCCATGCCTTCTTCCCTCTGGCAATACTGGCGCGGCCTTTCCGGCTGGAACTTCTATTTTCTGGTTAAGTTCGGCCTGTTGTGGGCGGGATATCTTAACTTCCATCCGCTCCTCAATTTGGTGTTTGCCGCGTTTCTGCTGATGCCCCTTCCGCGCTACAGCCTGCATCGCTTGCGCCACTGGATTGCCCTGCCGATCGGCTTTGCTTTGTTCTGGCATGACACCTGGTTGCCTGGCCCGGAAAGCATAATGAGCCAGGGTTCGCAGGTGGCGGGGTTCAGTACCGATTATTTAATCGACCTTGTCACACGCTTTATTAACTGGCAGATGATTGGGGCCATTTTTGTTTTATTAGTGGCCTGGTTATTCCTGTCACAATGGATTCGCATTACCGTTTTTGTGGTTGCCATACTGCTATGGCTGAACGTACTTACCCTGGCGGGACCAAGTTTCTCCTTGTGGCCAGCCGGACAACCGACGACCACTGTAACAACGACGGGTGGTAACGCAGCGGCAACCGTTGCGGCGACGGGTGGCGCACCGGTAGTGGGTGATATGCCCGCACAAACTGCACCGCCAACAACGGCGAACCTTAACGCCTGGCTGAATAATTTCTATAACGCGGAGGCGAAACGTAAATCGACCTTCCCGTCTTCGCTGCCCGCTGATGCTCAGCCATTTGAACTACTGGTGATTAACATCTGTTCGCTTTCCTGGTCGGATATAGAAGCCGCCGGGTTGATGTCGCATCCACTGTGGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAA", + "dna_sequence_length": 1680, + "functions": [ + "DUF3260 family cellulose production inner membrane protein" + ], + "id": "CDS_3475", + "location": [ + [ + "NC_000913", + 3698214, + "+", + 1680 + ] + ], + "md5": "369809cf1a3fe2476081de301f11e1c3", + "parent_gene": "", + "protein_md5": "3d8b03e439b3927ee39c8eee7feb29ea", + "protein_translation": "MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ", + "protein_translation_length": 559, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047284" + ], + [ + "gene_synonym", + "ECK3524" + ], + [ + "gene_synonym", + "EcoGene:EG14406" + ], + [ + "gene_synonym", + "GI:49176368" + ], + [ + "gene_synonym", + "GeneID:2847730" + ], + [ + "gene_synonym", + "JW5966" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF25" + ], + [ + "gene_synonym", + "YP_026227.1" + ], + [ + "gene_synonym", + "b4453" + ], + [ + "gene_synonym", + "ldrD" + ] + ], + "dna_sequence": "ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGATCGTGAACTGGCTGAACAAGCGGAAGTAA", + "dna_sequence_length": 108, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_3476", + "location": [ + [ + "NC_000913", + 3700087, + "-", + 108 + ] + ], + "md5": "38c3f12deb4a5718479ab485a05c30b2", + "parent_gene": "", + "protein_md5": "311aecf1c44bf620420d5934951323ee", + "protein_translation": "MTFAELGMAFWHDLAAPVIAGILASMIVNWLNKRK", + "protein_translation_length": 35, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011562" + ], + [ + "gene_synonym", + "ECK3526" + ], + [ + "gene_synonym", + "EcoGene:EG12266" + ], + [ + "gene_synonym", + "GI:16131411" + ], + [ + "gene_synonym", + "GeneID:948057" + ], + [ + "gene_synonym", + "JW3508" + ], + [ + "gene_synonym", + "NP_417996.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37660" + ], + [ + "gene_synonym", + "b3539" + ], + [ + "gene_synonym", + "yhjV" + ] + ], + "dna_sequence": "ATGCAGCACAACACACTATCGAAACACAATCAGAAATTGCCGTTTACACGCTACGACTTCGGCTGGGTTTTATTATGCATAGGCATGGCGATTGGTGCCGGAACCGTGCTGATGCCAGTACAAATTGGCTTGAAGGGAATTTGGGTATTTATTACCGCAGCGATCATTGCTTATCCTGCCACCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTACCTGAAAACCTTCGGTTTAACCGATGCCGATCTTTCACAATCTCTACTTTATAAAGTCGCTATTTTCGCCGTACTGGTGGCGATTGCGTCTGGTGGTGAACGATTACTGTTTAAGATTTCCGGGCCAATGGTGGTGGTCAAAGTAGGGATTATTGTCGTGTTCGGTTTTGCGATGATCCCGCACTGGAATTTCGCCAATATAACCGCCTTCCCGCAAGCCTCCGTCTTTTTCCGCGATGTCTTGCTTACCATTCCATTTTGCTTCTTTTCTGCAGTATTTATTCAGGTACTTAACCCAATGAATATTGCCTATCGTAAACGGGAAGCGGATAAAGTACTGGCAACCCGGCTCGCGCTGCGTACCCACCGAATTAGTTATATCACGCTCATCGCGGTGATCCTGTTTTTTGCCTTTTCGTTTACCTTCTCAATTAGCCACGAAGAAGCCGTTTCTGCCTTTGAACAAAATATCTCAGCACTGGCGCTGGCCGCGCAGGTGATCCCTGGGCATATCATTCATATCACCTCTACGGTGCTTAATATCTTTGCCGTACTGACCGCATTCTTTGGCATTTATCTCGGTTTCCACGAGGCCATTAAAGGCATTATTCTCAATCTGTTAAGCCGAATTATTGATACCAAGAAAATTAACTCACGCGTGCTGACTCTGGCGATCTGCGCTTTTATCGTCATTACGTTGACGATTTGGGTTTCGTTTCGTGTATCGGTGCTGGTGTTCTTTCAGTTGGGAAGCCCGTTATATGGTATTGTGTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAA", + "dna_sequence_length": 1272, + "functions": [ + "putative transporter" + ], + "id": "CDS_3477", + "location": [ + [ + "NC_000913", + 3700563, + "+", + 1272 + ] + ], + "md5": "34aacb7f2ca4c5dded6d3b20e4a6205b", + "parent_gene": "", + "protein_md5": "5156e2693333cb24f42b9d8757472f75", + "protein_translation": "MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRIIDTKKINSRVLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVAQLEKLRGFKAWLILLYGILLCLSPLLKLIE", + "protein_translation_length": 423, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011564" + ], + [ + "gene_synonym", + "ECK3527" + ], + [ + "gene_synonym", + "EcoGene:EG12628" + ], + [ + "gene_synonym", + "GI:16131412" + ], + [ + "gene_synonym", + "GeneID:948056" + ], + [ + "gene_synonym", + "JW3509" + ], + [ + "gene_synonym", + "NP_417997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37313" + ], + [ + "gene_synonym", + "b3540" + ], + [ + "gene_synonym", + "dppF" + ] + ], + "dna_sequence": "ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCTATCGACCTGAAAAAACATTATCCGGTGAAGAAAGGCATGTTCGCGCCGGAACGTCTGGTTAAAGCGCTGGATGGCGTTTCGTTTAACCTTGAACGTGGCAAAACGCTGGCAGTAGTGGGCGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGTTGCTGACGATGATTGAAATGCCCACCGGTGGCGAGCTGTATTACCAGGGGCAGGATCTGCTTAAGCACGATCCGCAGGCGCAGAAGCTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAACCCTTACGGTTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTTGAAGAGCCGCTGCTGATCAACACCAGCTTAAGCAAAGAACAGCGTCGGGAAAAAGCCCTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCACTATGACCGCTATCCGCATATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGAACCGGTTTCCGCGCTGGATGTTTCAGTGCGCGCGCAGGTGCTGAATCTGATGATGGATTTGCAGCAGGAGTTGGGGCTGTCTTATGTCTTTATCTCCCACGACCTGTCGGTGGTGGAGCACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGCGTGGAGAAGGGAACGAAAGACCAAATCTTCAATAACCCGCGCCATCCGTACACTCAGGCGCTACTTTCCGCGACGCCGCGCCTGAACCCGGACGATCGCCGCGAGCGCATCAAGCTCAGCGGTGAACTACCAAGCCCACTGAATCCACCGCCGGGTTGCGCCTTCAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACCCAGTTGCAGCCGCAGCTAAAAGACTACGGCGGTCAACTGGTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA", + "dna_sequence_length": 1005, + "functions": [ + "dipeptide/heme ABC transporter ATPas" + ], + "id": "CDS_3478", + "location": [ + [ + "NC_000913", + 3702868, + "-", + 1005 + ] + ], + "md5": "b9d5adab80063e63d93da4e68853dc64", + "parent_gene": "", + "protein_md5": "0c125115795bae7a1e6e7b32d8334b76", + "protein_translation": "MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011566" + ], + [ + "gene_synonym", + "ECK3528" + ], + [ + "gene_synonym", + "EcoGene:EG12627" + ], + [ + "gene_synonym", + "GI:16131413" + ], + [ + "gene_synonym", + "GeneID:948065" + ], + [ + "gene_synonym", + "JW3510" + ], + [ + "gene_synonym", + "NP_417998.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG0" + ], + [ + "gene_synonym", + "b3541" + ], + [ + "gene_synonym", + "dppD" + ] + ], + "dna_sequence": "ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAGCTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTATGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAAAAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACACCGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACCTGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAGCGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGACCATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACCTGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCCATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCTGGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCACTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGATGATGCCGGGAGGCCGACACTATGA", + "dna_sequence_length": 984, + "functions": [ + "dipeptide/heme ABC transporter ATPas" + ], + "id": "CDS_3479", + "location": [ + [ + "NC_000913", + 3703848, + "-", + 984 + ] + ], + "md5": "0e4d2201de5a676abeab048122f7e572", + "parent_gene": "", + "protein_md5": "d03839ac745ddbaf94d5a9a460a0aa79", + "protein_translation": "MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011570" + ], + [ + "gene_synonym", + "ECK3529" + ], + [ + "gene_synonym", + "EcoGene:EG12626" + ], + [ + "gene_synonym", + "GI:16131414" + ], + [ + "gene_synonym", + "GeneID:948064" + ], + [ + "gene_synonym", + "JW3511" + ], + [ + "gene_synonym", + "NP_417999.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEG1" + ], + [ + "gene_synonym", + "b3542" + ], + [ + "gene_synonym", + "dppC" + ] + ], + "dna_sequence": "ATGTCACAGGTTACTGAAAATAAAGTGATTAGCGCACCGGTGCCGATGACCCCGTTACAGGAGTTCTGGCACTATTTTAAACGCAACAAAGGCGCGGTCGTCGGGCTGGTTTACGTCGTCATCGTGCTGTTCATCGCGATCTTTGCCAACTGGATTGCACCCTATAACCCGGCGGAACAGTTCCGCGATGCACTGCTCGCCCCGCCAGCCTGGCAGGAAGGCGGCAGCATGGCGCACTTGCTGGGCACCGATGACGTAGGCCGTGATGTGCTGTCGCGCCTGATGTACGGTGCGCGCCTGTCGCTGCTGGTTGGCTGTCTGGTAGTTGTGTTATCGCTGATTATGGGCGTTATTCTCGGCCTGATCGCCGGTTACTTTGGCGGCCTGGTCGATAACATCATTATGCGCGTGGTCGATATCATGCTGGCGCTGCCAAGTCTGCTGCTGGCGCTGGTGCTGGTGGCAATTTTCGGCCCGTCGATTGGTAACGCCGCGCTGGCACTGACCTTCGTTGCCTTGCCGCACTATGTGCGCTTAACCCGCGCCGCCGTGCTGGTGGAAGTTAACCGCGATTACGTCACCGCGTCTCGCGTGGCGGGTGCCGGGGCGATGCGTCAGATGTTTATTAACATCTTCCCGAACTGCCTTGCGCCGCTGATTGTTCAGGCGTCGCTCGGTTTCTCTAACGCCATTCTCGATATGGCTGCTCTTGGTTTCCTCGGCATGGGGGCACAGCCGCCAACGCCTGAGTGGGGCACCATGCTCTCCGACGTGTTGCAGTTCGCGCAAAGCGCCTGGTGGGTCGTGACCTTCCCGGGTCTGGCGATCCTGCTGACGGTGCTGGCATTTAACCTGATGGGTGACGGTCTGCGTGACGCGCTCGATCCCAAACTGAAGCAGTAA", + "dna_sequence_length": 903, + "functions": [ + "dipeptide/heme ABC transporter permease" + ], + "id": "CDS_3480", + "location": [ + [ + "NC_000913", + 3704761, + "-", + 903 + ] + ], + "md5": "aa72038a7b3a1180d3360771b73d223b", + "parent_gene": "", + "protein_md5": "462381d1f9177a9af316dab6fb71b1f4", + "protein_translation": "MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011572" + ], + [ + "gene_synonym", + "ECK3530" + ], + [ + "gene_synonym", + "EcoGene:EG12625" + ], + [ + "gene_synonym", + "GI:16131415" + ], + [ + "gene_synonym", + "GeneID:948063" + ], + [ + "gene_synonym", + "JW3512" + ], + [ + "gene_synonym", + "NP_418000.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEF8" + ], + [ + "gene_synonym", + "b3543" + ], + [ + "gene_synonym", + "dppB" + ] + ], + "dna_sequence": "ATGTTGCAGTTTATTCTCCGACGTTTGGGACTCGTCATCCCCACGTTTATCGGTATTACCCTTCTCACATTTGCCTTTGTCCACATGATCCCGGGCGATCCGGTGATGATCATGGCGGGCGAACGTGGGATCTCCCCAGAGCGTCACGCGCAGCTGCTGGCTGAACTCGGCTTAGATAAACCGATGTGGCAGCAGTATCTCCATTACATTTGGGGCGTTATGCATGGCGATCTAGGCATTTCAATGAAAAGCCGCATCCCGGTTTGGGAAGAGTTCGTGCCGCGCTTCCAGGCCACGCTGGAACTTGGCGTCTGCGCGATGATTTTTGCTACGGCAGTCGGTATTCCGGTCGGCGTGCTGGCTGCGGTTAAACGCGGTTCCATTTTCGATCACACAGCGGTTGGCCTGGCGCTGACAGGTTATTCAATGCCTATCTTCTGGTGGGGCATGATGCTGATCATGCTGGTTTCGGTGCACTGGAACCTGACGCCCGTCTCCGGTCGCGTGAGCGATATGGTGTTCCTCGATGACTCCAATCCGTTAACCGGTTTTATGCTAATCGACACCGCCATCTGGGGTGAAGACGGCAACTTTATCGATGCCGTCGCCCATATGATCTTGCCTGCCATTGTGCTGGGTACTATTCCGCTGGCGGTCATTGTGCGTATGACACGCTCCTCGATGCTGGAAGTGCTGGGCGAGGATTACATCCGCACCGCGCGCGCCAAAGGGCTAACCCGCATGCGGGTGATTATCGTCCATGCGCTGCGTAACGCGATGCTGCCGGTGGTGACCGTTATCGGCCTGCAGGTGGGAACATTGCTGGCGGGGGCGATTCTGACCGAAACCATCTTCTCGTGGCCCGGTCTGGGACGCTGGTTGATTGACGCACTGCAACGCCGCGACTATCCGGTAGTGCAGGGCGGCGTATTGCTGGTGGCGACGATGATTATCCTCGTCAACTTGCTGGTCGATCTGCTGTACGGCGTGGTGAACCCGCGTATTCGTCATAAGAAGTAA", + "dna_sequence_length": 1020, + "functions": [ + "dipeptide/heme ABC transporter permease" + ], + "id": "CDS_3481", + "location": [ + [ + "NC_000913", + 3705790, + "-", + 1020 + ] + ], + "md5": "4670cdb04bb4502a929943ad4ab03bec", + "parent_gene": "", + "protein_md5": "5564ce4abd1598e41a94c30ac6f888ed", + "protein_translation": "MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011576" + ], + [ + "gene_synonym", + "ECK3531" + ], + [ + "gene_synonym", + "EcoGene:EG10248" + ], + [ + "gene_synonym", + "GI:16131416" + ], + [ + "gene_synonym", + "GeneID:948062" + ], + [ + "gene_synonym", + "JW3513" + ], + [ + "gene_synonym", + "NP_418001.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23847" + ], + [ + "gene_synonym", + "alu" + ], + [ + "gene_synonym", + "b3544" + ], + [ + "gene_synonym", + "dpp" + ], + [ + "gene_synonym", + "dppA" + ], + [ + "gene_synonym", + "fpp" + ] + ], + "dna_sequence": "ATGCGTATTTCCTTGAAAAAGTCAGGGATGCTGAAGCTTGGTCTCAGCCTGGTGGCTATGACCGTCGCAGCAAGTGTTCAGGCTAAAACTCTGGTTTATTGCTCAGAAGGATCTCCGGAAGGGTTTAACCCGCAGCTGTTTACCTCCGGCACCACCTATGACGCCTCTTCCGTCCCGCTTTATAACCGTCTGGTTGAATTTAAAATCGGCACCACCGAAGTGATCCCGGGCCTCGCTGAAAAGTGGGAAGTCAGCGAAGACGGTAAAACCTATACCTTCCATCTGCGTAAAGGTGTGAAGTGGCACGACAATAAAGAATTCAAACCGACGCGTGAACTGAACGCCGATGATGTGGTGTTCTCGTTCGATCGTCAGAAAAACGCGCAAAACCCGTACCATAAAGTTTCTGGCGGCAGCTACGAATACTTCGAAGGCATGGGCTTGCCAGAGCTGATCAGTGAAGTGAAAAAGGTGGACGACAACACCGTTCAGTTTGTGCTGACTCGCCCGGAAGCGCCGTTCCTCGCTGACCTGGCAATGGACTTCGCCTCTATTCTGTCAAAAGAATATGCTGATGCGATGATGAAAGCCGGTACACCGGAAAAACTGGACCTCAACCCAATCGGAACCGGTCCGTTCCAGTTACAGCAGTATCAAAAAGATTCCCGTATCCGCTACAAAGCGTTTGATGGCTACTGGGGCACCAAACCGCAGATCGATACGCTGGTTTTCTCTATTACCCCTGACGCTTCCGTGCGTTACGCGAAATTGCAGAAGAATGAATGCCAGGTGATGCCGTACCCGAACCCGGCAGATATCGCTCGCATGAAGCAGGATAAATCCATCAATCTGATGGAAATGCCGGGGCTGAACGTCGGTTATCTCTCGTATAACGTGCAGAAAAAACCACTCGATGACGTGAAAGTTCGCCAGGCTCTGACCTACGCGGTGAACAAAGACGCGATCATCAAAGCGGTTTATCAGGGCGCGGGCGTATCAGCGAAAAACCTGATCCCGCCAACCATGTGGGGCTATAACGACGACGTTCAGGACTACACCTACGATCCTGAAAAAGCGAAAGCCTTGCTGAAAGAAGCGGGTCTGGAAAAAGGTTTCTCCATCGACCTGTGGGCGATGCCGGTACAACGTCCGTATAACCCGAACGCTCGCCGCATGGCGGAGATGATTCAGGCAGACTGGGCGAAAGTCGGCGTGCAGGCCAAAATTGTCACCTACGAATGGGGTGAGTACCTCAAGCGTGCGAAAGATGGCGAGCACCAGACGGTAATGATGGGCTGGACTGGCGATAACGGGGATCCGGATAACTTCTTCGCCACCCTGTTCAGCTGCGCCGCCTCTGAACAAGGCTCCAACTACTCAAAATGGTGCTACAAACCGTTTGAAGATCTGATTCAACCGGCGCGTGCTACCGACGACCACAATAAACGCGTTGAACTGTACAAACAAGCGCAGGTGGTGATGCACGATCAGGCTCCGGCACTGATCATCGCTCACTCCACCGTGTTTGAACCGGTACGTAAAGAAGTTAAAGGCTATGTGGTTGATCCATTAGGCAAACATCACTTCGAAAACGTCTCTATCGAATAA", + "dna_sequence_length": 1608, + "functions": [ + "dipeptide/heme ABC transporter periplasmic binding protein", + "dipeptide chemotaxis receptor" + ], + "id": "CDS_3482", + "location": [ + [ + "NC_000913", + 3707705, + "-", + 1608 + ] + ], + "md5": "5b3f78837b5ea9759e10a1b6cf4b6d85", + "parent_gene": "", + "protein_md5": "d1cdacd5d00da33b7dba0df200229b25", + "protein_translation": "MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE", + "protein_translation_length": 535, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011581" + ], + [ + "gene_synonym", + "ECK3533" + ], + [ + "gene_synonym", + "EcoGene:EG12267" + ], + [ + "gene_synonym", + "GI:90111611" + ], + [ + "gene_synonym", + "GeneID:948068" + ], + [ + "gene_synonym", + "JW5660" + ], + [ + "gene_synonym", + "NP_418002.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37661" + ], + [ + "gene_synonym", + "b3546" + ], + [ + "gene_synonym", + "eptB" + ], + [ + "gene_synonym", + "pagC" + ], + [ + "gene_synonym", + "yhjW" + ] + ], + "dna_sequence": "ATGAGATACATCAAATCGATTACACAGCAGAAGCTGAGCTTTTTGCTTGCAATCTATATTGGCCTTTTTATGAATGGCGCGGTTTTTTACCGCCGCTTCGGCAGCTATGCGCACGATTTTACCGTCTGGAAAGGCATTTCTGCTGTTGTTGAACTGGCCGCCACCGTACTGGTGACCTTCTTTTTACTACGTCTTCTTTCGCTGTTTGGCCGCCGCAGCTGGCGTATTCTGGCATCGCTGGTGGTGCTCTTTTCCGCAGGTGCCAGCTATTACATGACCTTCCTTAATGTGGTCATTGGTTATGGCATCATCGCTTCCGTCATGACCACCGATATCGACCTGTCAAAAGAAGTTGTTGGTCTGAACTTTATTCTCTGGTTAATCGCCGTTAGTGCATTGCCTCTTATCCTTATCTGGAATAACCGCTGTCGCTACACCTTGCTCCGACAACTGCGAACCCCAGGGCAGCGTATTCGCAGCCTGGCGGTCGTCGTACTGGCGGGTATTATGGTTTGGGCACCGATTCGTTTGCTGGATATCCAGCAGAAGAAAGTGGAGAGGGCGACCGGCGTTGATTTGCCGAGTTATGGCGGTGTCGTAGCGAACTCTTATCTGCCATCAAACTGGCTTTCTGCGTTGGGGCTGTATGCCTGGGCGCGGGTCGATGAATCTTCCGATAATAATTCATTGCTTAATCCGGCGAAGAAATTCACTTATCAGGCACCGCAAAACGTTGATGACACTTATGTCGTGTTTATCATCGGTGAAACCACGCGTTGGGACCATATGGGTATTTTCGGCTATGAGCGTAATACCACGCCGAAACTGGCCCAGGAGAAAAATCTGGCGGCGTTCCGTGGTTACTCCTGTGATACCGCAACCAAACTCTCACTGCGTTGCATGTTTGTACGTCAGGGGGGCGCGGAAGATAATCCGCAGCGCACATTAAAAGAACAGAACATTTTCGCGGTTCTGAAGCAGTTAGGATTCAGTTCTGACCTCTACGCTATGCAGAGCGAAATGTGGTTCTACAGCAACACGATGGCGGACAACATTGCTTATCGTGAGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATGTTGCTGGTAGACGAAATGCAGCAATCGCTAGGGCGCAACCCGGATGGTAAGCATCTGATCATTCTGCATACCAAAGGTTCGCATTTTAACTACACCCAGCGTTATCCGCGTAGCTTCGCGCAGTGGAAGCCGGAATGTATTGGTGTTGATAGCGGCTGTACCAAAGCGCAGATGATCAACTCCTATGACAACTCGGTGACCTATGTGGATCACTTTATCTCCAGCGTGATTGATCAGGTTCGCGATAAGAAAGCGATTGTGTTCTACGCAGCTGACCACGGTGAGTCAATTAATGAACGCGAGCACCTGCACGGCACGCCGCGTGAACTGGCACCGCCGGAGCAGTTCCGCGTACCGATGATGGTCTGGATGTCAGATAAATATCTGGAAAATCCGGCCAATGCGCAGGCGTTTGCGCAGCTGAAAAAAGAAGCCGACATGAAAGTGCCACGCCGTCACGTAGAGCTGTACGATACCATCATGGGTTGTCTTGGCTATACTTCACCGGATGGTGGAATTAACGAAAACAACAACTGGTGTCACATCCCGCAGGCAAAAGAGGCAGCGGCTAACTAA", + "dna_sequence_length": 1692, + "functions": [ + "KDO phosphoethanolamine transferase, Ca(2+)-inducible" + ], + "id": "CDS_3483", + "location": [ + [ + "NC_000913", + 3710475, + "-", + 1692 + ] + ], + "md5": "c408715f35d31db017a012cf5c11baef", + "parent_gene": "", + "protein_md5": "df841a9ecb8bd49056c65c4ec0caa48d", + "protein_translation": "MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWKGISAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYGIIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRSLAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAWARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKLAQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQAFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN", + "protein_translation_length": 563, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011586" + ], + [ + "gene_synonym", + "ECK3534" + ], + [ + "gene_synonym", + "EcoGene:EG12268" + ], + [ + "gene_synonym", + "GI:16131418" + ], + [ + "gene_synonym", + "GeneID:948066" + ], + [ + "gene_synonym", + "JW3516" + ], + [ + "gene_synonym", + "NP_418003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37662" + ], + [ + "gene_synonym", + "b3547" + ], + [ + "gene_synonym", + "oxlT" + ], + [ + "gene_synonym", + "yhjX" + ] + ], + "dna_sequence": "ATGACACCTTCAAATTATCAGCGTACCCGCTGGCTGACACTCATCGGTACTATCATTACCCAGTTTGCGCTGGGGTCGGTTTATACCTGGAGCCTGTTTAATGGCGCGCTTTCCGCCAAGCTGGATGCGCCGGTAAGCCAGGTCGCTTTCTCTTTCGGCTTGTTAAGTCTGGGGCTGGCAATTTCGTCTTCTGTTGCGGGCAAATTACAGGAACGTTTTGGCGTTAAACGCGTCACCATGGCTTCCGGCATTTTGCTGGGATTAGGCTTCTTCCTGACAGCGCATTCTGACAACCTGATGATGCTGTGGTTAAGCGCCGGTGTGCTGGTGGGACTGGCAGATGGCGCGGGTTATCTGCTGACGCTCTCTAACTGTGTGAAGTGGTTCCCGGAGCGTAAAGGTCTGATCTCCGCGTTCGCTATCGGTTCTTATGGTCTGGGTAGCCTGGGTTTCAAATTTATCGACACGCAGCTGCTGGAAACGGTCGGTCTGGAAAAAACCTTTGTGATTTGGGGAGCGATTGCGCTGTTGATGATTGTTTTCGGCGCAACGTTAATGAAAGACGCACCAAAACAGGAAGTGAAAACCAGCAATGGTGTGGTGGAGAAAGATTACACGCTGGCAGAGTCGATGCGTAAACCGCAGTACTGGATGTTAGCGGTAATGTTCCTGACCGCCTGCATGAGCGGCCTGTACGTGATTGGGGTAGCGAAAGATATCGCCCAAAGTCTGGCACACCTTGATGTGGTTTCCGCAGCCAATGCAGTCACTGTTATTTCCATCGCCAACCTTTCAGGTCGTCTGGTGCTGGGTATTCTGTCTGACAAAATCGCCCGTATCCGTGTTATTACCATTGGTCAGGTGATATCGCTGGTGGGTATGGCGGCCCTGCTGTTTGCACCATTGAATGCAGTGACGTTCTTTGCAGCGATTGCCTGCGTGGCATTTAACTTTGGCGGCACTATTACCGTCTTTCCGTCACTGGTCAGTGAGTTCTTTGGCCTCAATAACCTGGCGAAAAACTACGGTGTGATTTATCTCGGTTTCGGTATCGGTAGCATTTGTGGTTCGATTATCGCCTCACTGTTTGGCGGCTTCTATGTGACCTTCTACGTGATTTTCGCCCTGCTGATTCTGTCATTGGCGCTTTCTACGACGATTCGTCAGCCAGAGCAGAAAATGTTGCGTGAGGCGCATGGCTCCCTTTAA", + "dna_sequence_length": 1209, + "functions": [ + "pyruvate-inducible inner membrane protein, putative transporter" + ], + "id": "CDS_3484", + "location": [ + [ + "NC_000913", + 3712007, + "-", + 1209 + ] + ], + "md5": "d8eff52f69ab19ff0b51f12c9dca0624", + "parent_gene": "", + "protein_md5": "29c6399dfa9cae69ed84165c8b924865", + "protein_translation": "MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL", + "protein_translation_length": 402, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011589" + ], + [ + "gene_synonym", + "ECK3535" + ], + [ + "gene_synonym", + "EcoGene:EG12269" + ], + [ + "gene_synonym", + "GI:90111612" + ], + [ + "gene_synonym", + "GeneID:948073" + ], + [ + "gene_synonym", + "JW5659" + ], + [ + "gene_synonym", + "NP_418004.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37663" + ], + [ + "gene_synonym", + "b3548" + ], + [ + "gene_synonym", + "yhjY" + ] + ], + "dna_sequence": "ATGATCATAAAAAAAAGCGGTGGTCGCTGGCAGCTAAGCCTGCTGGCGAGCGTGGTAATCAGTGCCTTTTTTCTCAACACAGCTTACGCCTGGCAACAAGAATATATCGTTGATACGCAACCCGGACTTTCCACAGAGCGTTACACCTGGGATAGTGATCATCAACCTGATTACAACGATATTTTGTCGCAACGTATTCAAAGTAGCCAAAGGGCGCTGGGACTGGAAGTCAATCTGGCGGAAGAAACCCCTGTGGATGTGACCAGCAGTATGAGTATGGGCTGGAATTTTCCTTTATATGAACAGGTTACAACCGGCCCGGTCGCGGCATTACATTACGATGGCACAACCACCTCGATGTATAACGAGTTTGGCGACAGTACTACCACGCTGACCGATCCGTTATGGCATGCCAGCGTGAGTACCTTAGGCTGGCGTGTTGACTCCCGGCTTGGCGATCTCCGACCCTGGGCGCAAATCAGCTATAACCAGCAATTTGGCGAGAATATCTGGAAGGCGCAATCAGGCCTGAGCCGGATGACGGCGACAAACCAGAACGGCAACTGGCTGGATGTCACCGTAGGCGCTGATATGTTGCTCAATCAAAATATTGCCGCCTATGCCGCGCTAACTCAGGCAGAAAATACCACTAATAATAGCGACTATCTGTATACGATGGGGGTTAGCGCCAGATTTTAA", + "dna_sequence_length": 699, + "functions": [ + "autotransporter beta-domain protein" + ], + "id": "CDS_3485", + "location": [ + [ + "NC_000913", + 3712934, + "-", + 699 + ] + ], + "md5": "cd0a510db5aadae20b424f2d4d80b46c", + "parent_gene": "", + "protein_md5": "e74491a9b73a717ef4239142260ad8a5", + "protein_translation": "MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011593" + ], + [ + "gene_synonym", + "ECK3536" + ], + [ + "gene_synonym", + "EcoGene:EG10986" + ], + [ + "gene_synonym", + "GI:16131420" + ], + [ + "gene_synonym", + "GeneID:947137" + ], + [ + "gene_synonym", + "JW3518" + ], + [ + "gene_synonym", + "NP_418005.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05100" + ], + [ + "gene_synonym", + "b3549" + ], + [ + "gene_synonym", + "tag" + ], + [ + "gene_synonym", + "tagA" + ] + ], + "dna_sequence": "ATGGAACGTTGCGGCTGGGTGAGTCAGGACCCGCTTTATATTGCCTACCATGATAATGAGTGGGGCGTGCCTGAAACTGACAGTAAAAAACTGTTCGAAATGATCTGCCTTGAAGGGCAGCAGGCTGGATTATCGTGGATCACCGTCCTCAAAAAACGCGAAAACTATCGCGCCTGCTTTCATCAGTTCGATCCGGTGAAGGTCGCAGCAATGCAGGAAGAGGATGTCGAAAGACTGGTACAGGACGCCGGGATTATCCGCCATCGAGGGAAAATTCAGGCAATTATTGGTAATGCGCGGGCGTACCTGCAAATGGAACAGAACGGCGAACCGTTTGTCGACTTTGTCTGGTCGTTTGTAAATCATCAGCCACAGGTGACACAAGCCACAACGTTGAGCGAAATTCCCACATCTACGTCCGCCTCCGACGCCCTATCTAAGGCACTGAAAAAACGTGGTTTTAAGTTTGTCGGCACCACAATCTGTTACTCCTTTATGCAGGCATGTGGGCTGGTGAATGATCATGTGGTTGGCTGCTGTTGCTATCCGGGAAATAAACCATGA", + "dna_sequence_length": 564, + "functions": [ + "3-methyl-adenine DNA glycosylase I, constitutive" + ], + "id": "CDS_3486", + "location": [ + [ + "NC_000913", + 3713092, + "+", + 564 + ] + ], + "md5": "bbdbd9176a5b4d0c5090f6536fc60387", + "parent_gene": "", + "protein_md5": "066f7bd100a8dcf0ad4f7e37517c0e12", + "protein_translation": "MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSFVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCYPGNKP", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011595" + ], + [ + "gene_synonym", + "ECK3537" + ], + [ + "gene_synonym", + "EcoGene:EG12270" + ], + [ + "gene_synonym", + "GI:16131421" + ], + [ + "gene_synonym", + "GeneID:946460" + ], + [ + "gene_synonym", + "JW3519" + ], + [ + "gene_synonym", + "NP_418006.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37664" + ], + [ + "gene_synonym", + "b3550" + ], + [ + "gene_synonym", + "yiaC" + ] + ], + "dna_sequence": "ATGATTCGGGAAGCGCAACGTTCAGAACTCCCCGCGATCCTCGAACTGTGGCTGGAAAGTACAACCTGGGGGCATCCCTTTATAAAAGCGAATTACTGGCGTGACTGCATTCCGCTGGTGCGGGATGCCTATCTTGCCAACGCGCAAAACTGGGTCTGGGAAGAAGACGGTAAGCTTCTCGGTTTTGTCAGCATTATGGAAGGCCGATTTCTGGCAGCGATGTTTGTCGCACCGAAGGCCGTCAGGCGCGGTATTGGTAAGGCGCTGATGCAGTATGTGCAGCAGCGCCATCCCCACCTGATGCTGGAGGTTTATCAAAAAAATCAACCGGCGATAAATTTTTACCAGGCACAGGGTTTTCACATTGTCGATTGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAA", + "dna_sequence_length": 441, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_3487", + "location": [ + [ + "NC_000913", + 3713652, + "+", + 441 + ] + ], + "md5": "3ad512f77e67dc5b1a86e2054e062179", + "parent_gene": "", + "protein_md5": "2c2f7ff8626da4cb8f627a99be8d0d61", + "protein_translation": "MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAYLANAQNWVWEEDGKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLMLEVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011597" + ], + [ + "gene_synonym", + "ECK3538" + ], + [ + "gene_synonym", + "EcoGene:EG10124" + ], + [ + "gene_synonym", + "GI:145698325" + ], + [ + "gene_synonym", + "GeneID:946915" + ], + [ + "gene_synonym", + "JW5940" + ], + [ + "gene_synonym", + "NP_418007.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P20099" + ], + [ + "gene_synonym", + "b3551" + ], + [ + "gene_synonym", + "bisC" + ] + ], + "dna_sequence": "TTGGCCAACTCATCCTCACGATATTCCGTTCTGACTGCCGCCCATTGGGGGCCCATGCTGGTTGAAACCGACGGCGAAACCGTGTTTAGCTCGCGTGGCGCGTTAGCCACAGGAATGGAAAACTCCTTGCAGAGCGCGGTTCGCGACCAGGTTCACAGCAATACGCGGGTACGATTTCCAATGGTGCGAAAAGGCTTTCTTGCGTCACCGGAAAACCCGCAAGGCATTCGTGGGCAGGATGAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGATCTTATTCACCAACAACATAAACGCATTCGTGAGGCTTATGGTCCGGCATCGATTTTTGCTGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAAGGCCTCGACATTATTACAACGCTATATGGCGCTGGCAGGCGGTTATACCGGGCATCTGGGGGATTATTCGACCGGCGCGGCACAGGCGATCATGCCGTATGTCGTGGGTGGTAGTGAAGTTTATCAACAGCAGACCAGTTGGCCGCTGGTGCTGGAACATAGCGATGTCGTGGTGCTGTGGAGTGCTAACCCACTCAATACGCTGAAAATTGCGTGGAATGCATCCGATGAGCAGGGGCTTTCTTACTTTTCTGCACTGCGTGACAGCGGGAAAAAGCTGATCTGCATTGATCCAATGCGATCGGAAACCGTCGATTTCTTTGGCGATAAAATGGAGTGGGTGGCACCGCACATGGGCACCGATGTTGCGCTGATGCTGGGGATCGCCCATACGCTGGTGGAAAATGGTTGGCACGACGAAGCGTTTCTGGCGCGTTGCACCACAGGTTATGCCGTCTTCGCCTCTTATTTGCTGGGCGAGAGTGACGGAATAGCGAAAACCGCCGAATGGGCAGCAGAGATTTGTGGTGTTGGCGCAGCGAAAATCCGCGAGCTGGCGGCTATTTTCCACCAAAATACCACCATGCTGATGGCAGGCTGGGGAATGCAGCGCCAACAGTTTGGTGAGCAAAAACACTGGATGATCGTCACGCTGGCAGCAATGTTGGGGCAAATCGGCACACCCGGCGGCGGTTTTGGTCTTTCTTACCATTTTGCCAATGGTGGTAACCCCACGCGGCGTTCTGCGGTGCTCTCTTCCATGCAGGGCAGCTTGCCGGGTGGCTGCGATGCGGTGGATAAAATCCCTGTTGCCCGCATTGTTGAAGCACTGGAAAACCCTGGTGGCGCATATCAACACAACGGTATGAACCGACATTTCCCGGATATTCGTTTTATCTGGTGGGCGGGCGGTGCCAACTTTACTCATCATCAGGATACCAATCGCCTGATCCGTGCCTGGCAAAAACCGGAGCTGGTGGTGATCTCTGAATGCTTCTGGACGGCGGCGGCAAAACACGCGGATATCGTTCTGCCTGCGACTACCTCTTTTGAGCGTAATGATCTCACCATGACCGGTGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTGCCGCCACGCTATGAAGCGCGTAATGATTTTGATGTTTTTGCCGAGTTAAGTGAACGCTGGGAGAAGGGCGGTTATGCACGTTTTACGGAAGGAAAAAGTGAGCTGCAATGGCTGGAAACGTTTTATAACGTTGCCCGACAGCGCGGGGCAAGCCAGCAGGTTGAATTGCCGCCATTTGCTGAGTTCTGGCAAGCCAACCAGTTAATTGAGATGCCGGAAAACCCGGACAGCGAGCGGTTTATTCGCTTCGCTGATTTTTGCCGCGATCCGCTGGCGCATCCGTTAAAAACCGCCAGCGGCAAGATTGAAATCTTCTCACAGCGTATTGCCGATTACGGTTACCCGGATTGCCCTGGGCATCCAATGTGGCTGGAGCCGGACGAATGGCAGGGCAATGCCGAACCAGAACAGTTGCAGGTACTTTCTGCCCATCCGGCGCACCGCCTGCACAGCCAGCTGAATTACAGTTCTCTGCGCGAATTGTACGCGGTGGCAAATCGTGAGCCTGTCACCATTCATCCTGACGATGCCCAGGAGCGCGGCATACAAGATGGCGATACTGTTCGGTTGTGGAACGCACGCGGGCAAATTCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGCATTCACGAAGGGGCATGGCCGGATCTGGATTTAACCGCTGACGGTATTTGTAAAAACGGCGCAGTGAACGTGCTGACCAAAGATCTCCCCAGCTCGCGGCTGGGGAATGGCTGTGCGGGTAATACGGCGCTGGCATGGCTGGAAAAATACAACGGTCCGGAACTGACACTTACAGCGTTTGAACCACCGGCCAGCTCATAA", + "dna_sequence_length": 2334, + "functions": [ + "biotin sulfoxide reductase" + ], + "id": "CDS_3488", + "location": [ + [ + "NC_000913", + 3716394, + "-", + 2334 + ] + ], + "md5": "3d20161af094109118abe8b1f6dea8d8", + "parent_gene": "", + "protein_md5": "f0ef4f72528b128ec1a34450cc801a67", + "protein_translation": "MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAEICGVGAAKIRELAAIFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERFIRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQERGIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS", + "protein_translation_length": 777, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011601" + ], + [ + "gene_synonym", + "ECK3539" + ], + [ + "gene_synonym", + "EcoGene:EG12271" + ], + [ + "gene_synonym", + "GI:49176370" + ], + [ + "gene_synonym", + "GeneID:948075" + ], + [ + "gene_synonym", + "JW5657" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37665" + ], + [ + "gene_synonym", + "YP_026228.1" + ], + [ + "gene_synonym", + "b3552" + ], + [ + "gene_synonym", + "yiaD" + ] + ], + "dna_sequence": "ATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAAAGATCGCGGTAAAGGCGCGCTGATTGGCGCAGCAGCAGGCGCAGCTCTGGGCGGCGGCGTTGGTTATTACATGGATGTGCAGGAAGCGAAGCTGCGCGACAAAATGCGCGGCACTGGTGTTAGCGTAACCCGCAGCGGGGATAACATTATCCTCAATATGCCGAACAATGTGACCTTCGACAGCAGCAGCGCGACCCTGAAACCGGCGGGCGCTAACACCCTGACCGGCGTGGCAATGGTACTGAAAGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGACGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAA", + "dna_sequence_length": 660, + "functions": [ + "multicopy suppressor of bamB", + "outer membrane lipoprotein" + ], + "id": "CDS_3489", + "location": [ + [ + "NC_000913", + 3716547, + "+", + 660 + ] + ], + "md5": "e83f1f1c5661a16e6b598ede438799a4", + "parent_gene": "", + "protein_md5": "73fda5c9064dcaf9e2ab74e80353758c", + "protein_translation": "MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011604" + ], + [ + "gene_synonym", + "ECK3540" + ], + [ + "gene_synonym", + "EcoGene:EG12272" + ], + [ + "gene_synonym", + "GI:90111614" + ], + [ + "gene_synonym", + "GeneID:948074" + ], + [ + "gene_synonym", + "JW5656" + ], + [ + "gene_synonym", + "NP_418009.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37666" + ], + [ + "gene_synonym", + "b3553" + ], + [ + "gene_synonym", + "ghrB" + ], + [ + "gene_synonym", + "tkrA" + ], + [ + "gene_synonym", + "yiaE" + ] + ], + "dna_sequence": "ATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCATTTCACCGTTCACCAGGTGGCAAACCTCAGCCCACAAACCGTCGAACAAAATGCAGCAATTTTTGCCGAAGCTGAAGGTTTACTGGGTTCAAACGAGAATGTAAATGCCGCATTGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCTTCAACATGCCCATCCTCTATAACGCGCGCCGCCACCATAAAGAAGCAGAAGAACGCTTCAACGCCCGCTACTGCGATTTGGATACTCTGTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAA", + "dna_sequence_length": 975, + "functions": [ + "glyoxylate/hydroxypyruvate reductase B" + ], + "id": "CDS_3490", + "location": [ + [ + "NC_000913", + 3717310, + "+", + 975 + ] + ], + "md5": "e1053fb7c4fae92779cbeb326d08d11e", + "parent_gene": "", + "protein_md5": "303b91569818b7792b63ca148d2df81d", + "protein_translation": "MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011606" + ], + [ + "gene_synonym", + "ECK3541" + ], + [ + "gene_synonym", + "EcoGene:EG12273" + ], + [ + "gene_synonym", + "GI:90111615" + ], + [ + "gene_synonym", + "GeneID:948072" + ], + [ + "gene_synonym", + "JW5655" + ], + [ + "gene_synonym", + "NP_418010.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADK0" + ], + [ + "gene_synonym", + "b3554" + ], + [ + "gene_synonym", + "yiaF" + ] + ], + "dna_sequence": "ATGGCGACAGGAAAGTCCTGCTCTCGCTGGTTTGCGCCTCTTGCGGCGTTATTAATGGTAGTTAGCCTGAGTGGGTGTTTTGATAAAGAAGGCGATCAGCGTAAAGCGTTTATCGACTTCCTGCAGAATACAGTGATGCGTAGCGGTGAACGTCTACCAACCCTGACTGCCGATCAGAAAAAACAGTTTGGTCCTTTTGTCTCTGATTACGCGATTCTGTATGGTTATTCTCAGCAGGTGAATCAGGCGATGGATTCCGGTCTGCGCCCGGTTGTAGACAGCGTTAACGCAATTCGCGTACCGCAGGATTACGTTACGCAAAGCGGTCCGCTGCGTGAAATGAACGGTTCGCTGGGTGTGCTGGCGCAACAACTGCAAAATGCGAAGTTGCAGGCCGATGCTGCGCACTCTGCGCTAAAACAGAGCGATGATTTGAAACCGGTCTTTGATCAGGCATTCACCAAAGTGGTAACGACGCCAGCTGATGCATTGCAACCGTTGATTCCGGCGGCACAAACTTTCACGCAACAACTGGTGATGGTTGGAGACTACATTGCTCAGCAAGGTACTCAGGTGAGCTTTGTCGCAAATGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCATTACCGGCACAGCATCAGGCGTTTAATCAGGCCTGGACTACAGCAGTTACTGCAACCCAATAA", + "dna_sequence_length": 711, + "functions": [ + "barrier effect co-colonization resistance factor", + "DUF3053 family lipoprotein" + ], + "id": "CDS_3491", + "location": [ + [ + "NC_000913", + 3719044, + "-", + 711 + ] + ], + "md5": "ec9ea7a65a33850d9d3b0a891cbd8207", + "parent_gene": "", + "protein_md5": "d7997edec107c0e6dafb6563581aac7f", + "protein_translation": "MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQSDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011612" + ], + [ + "gene_synonym", + "ECK3542" + ], + [ + "gene_synonym", + "EcoGene:EG12624" + ], + [ + "gene_synonym", + "GI:16131426" + ], + [ + "gene_synonym", + "GeneID:948071" + ], + [ + "gene_synonym", + "JW3524" + ], + [ + "gene_synonym", + "NP_418011.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9V5" + ], + [ + "gene_synonym", + "b3555" + ], + [ + "gene_synonym", + "yiaG" + ] + ], + "dna_sequence": "ATGGAATATAAAGATCCAATGCATGAGCTGTTGAGCAGCCTGGAACAGATTGTTTTTAAAGATGAAACGCAGAAAATTACCCTGACGCACAGAACAACGTCCTGTACCGAAATTGAGCAGTTACGAAAAGGGACAGGATTAAAAATCGATGATTTCGCCCGGGTTTTGGGCGTATCAGTCGCCATGGTAAAGGAATGGGAATCCAGACGCGTGAAGCCTTCAAGTGCCGAACTAAAATTGATGCGTTTGATTCAAGCCAACCCGGCATTAAGTAAGCAGTTGATGGAATAG", + "dna_sequence_length": 291, + "functions": [ + "HTH_CROC1 family putative transcriptional regulator" + ], + "id": "CDS_3492", + "location": [ + [ + "NC_000913", + 3719478, + "+", + 291 + ] + ], + "md5": "c335fbca49676583d146ca2e03caf2e8", + "parent_gene": "", + "protein_md5": "f482944325ae85c7e9a4624ec771d036", + "protein_translation": "MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011616" + ], + [ + "gene_synonym", + "ECK3543" + ], + [ + "gene_synonym", + "EcoGene:EG10166" + ], + [ + "gene_synonym", + "GI:16131427" + ], + [ + "gene_synonym", + "GeneID:948070" + ], + [ + "gene_synonym", + "JW3525" + ], + [ + "gene_synonym", + "NP_418012.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9X9" + ], + [ + "gene_synonym", + "b3556" + ], + [ + "gene_synonym", + "cspA" + ] + ], + "dna_sequence": "ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTCGGCTTCATCACTCCTGACGATGGCTCTAAAGATGTGTTCGTACACTTCTCTGCTATCCAGAACGATGGTTACAAATCTCTGGACGAAGGTCAGAAAGTGTCCTTCACCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGTAACGTAACCAGCCTGTAA", + "dna_sequence_length": 213, + "functions": [ + "RNA chaperone and antiterminator, cold-inducible" + ], + "id": "CDS_3493", + "location": [ + [ + "NC_000913", + 3720049, + "+", + 213 + ] + ], + "md5": "feb1dd1c0e17d9471041d15e82447327", + "parent_gene": "", + "protein_md5": "40785a8282413070fe126dfd41e458ff", + "protein_translation": "MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4448" + ], + [ + "gene_synonym", + "EcoGene:EG14436" + ], + [ + "gene_synonym", + "GeneID:5625573" + ], + [ + "gene_synonym", + "b4647" + ], + [ + "gene_synonym", + "mokA" + ] + ], + "dna_sequence": "TACTCGTTGGAAATCAACACAGGAGGCTGGGAATGCCGCAGAAATATAGATTACTTTCTTTAATAGTGATTTGTTTCACGCTTTTATTTTTCACCTGGATGATAAGAGATTCACTGTGTGAATTGCATATTAAACAGGAGAGTTATGAGCTGGCGGCGTTTTTAGCCTGCAAATTGAAAGAGTAA", + "dna_sequence_length": 185, + "id": "CDS_3494", + "location": [ + [ + "NC_000913", + 3720632, + "-", + 185 + ] + ], + "md5": "71bbb3a648f31e58c3f635bab578467c", + "parent_gene": "", + "protein_md5": "d12b8c3799576fa0f6882a3b264a3583", + "protein_translation": "YSLEINTGGWECRRNIDYFL", + "protein_translation_length": 20, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047285" + ], + [ + "gene_synonym", + "ECK3544" + ], + [ + "gene_synonym", + "EcoGene:EG12346" + ], + [ + "gene_synonym", + "GI:49176371" + ], + [ + "gene_synonym", + "GeneID:2847732" + ], + [ + "gene_synonym", + "JW3526" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37305" + ], + [ + "gene_synonym", + "YP_026229.1" + ], + [ + "gene_synonym", + "b4455" + ], + [ + "gene_synonym", + "hokA" + ], + [ + "gene_synonym", + "yiaZ" + ] + ], + "dna_sequence": "ATGCCGCAGAAATATAGATTACTTTCTTTAATAGTGATTTGTTTCACGCTTTTATTTTTCACCTGGATGATAAGAGATTCACTGTGTGAATTGCATATTAAACAGGAGAGTTATGAGCTGGCGGCGTTTTTAGCCTGCAAATTGAAAGAGTAA", + "dna_sequence_length": 153, + "functions": [ + "toxic polypeptide, small" + ], + "id": "CDS_3495", + "location": [ + [ + "NC_000913", + 3720600, + "-", + 153 + ] + ], + "md5": "37f179e0889cd15c7c9f7ca70c466c56", + "parent_gene": "", + "protein_md5": "675678ed15c3e500584ca420074d8870", + "protein_translation": "MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE", + "protein_translation_length": 50, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011620" + ], + [ + "gene_synonym", + "ECK3545" + ], + [ + "gene_synonym", + "EcoGene:EG40010" + ], + [ + "gene_synonym", + "GI:16131428" + ], + [ + "gene_synonym", + "GeneID:948082" + ], + [ + "gene_synonym", + "NP_418014.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19768" + ], + [ + "gene_synonym", + "b3557" + ], + [ + "gene_synonym", + "insJ" + ] + ], + "dna_sequence": "ATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGA", + "dna_sequence_length": 522, + "functions": [ + "IS150 transposase A" + ], + "id": "CDS_3496", + "location": [ + [ + "NC_000913", + 3720680, + "+", + 522 + ] + ], + "md5": "909f4d0ded7e31bcf20a657ad46ef4aa", + "parent_gene": "", + "protein_md5": "6b5dab8665664d9033bada6077f9f47a", + "protein_translation": "MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011622" + ], + [ + "gene_synonym", + "ECK3546" + ], + [ + "gene_synonym", + "EcoGene:EG40011" + ], + [ + "gene_synonym", + "GI:16131429" + ], + [ + "gene_synonym", + "GeneID:948081" + ], + [ + "gene_synonym", + "NP_418015.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19769" + ], + [ + "gene_synonym", + "b3558" + ], + [ + "gene_synonym", + "dinS" + ], + [ + "gene_synonym", + "insK" + ] + ], + "dna_sequence": "GTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGACAAGTATGCGGACGTTAAAAAGCGTATTAGTGAGATTTATCACGAGAATAGAGGCCGATACGGATACCGTAGGGTAACGCTGTCTCTTCATCGAGAAGGGAAACAGATTAACCATAAAGCTGTTCAGCGCCTGATGGGAACCCTCTCACTTAAAGCAGCGATTAAGGTCAAGCGATACCGCTCTTACAGAGGAGAGGTAGGGCAAACCGCCCCTAATGTTCTCCAAAGAGATTTCAAGGCTACGCGGCCAAACGAGAAGTGGGTTACCGATGTTACTGAATTTGCAGTCAATGGGCGCAAGCTGTATTTGTCTCCAGTAATAGATCTCTTCAACAACGAAGTTATTTCTTACAGCCTTTCGGAAAGACCAGTGATGAACATGGTTGAGAATATGCTCGATCAGGCATTCAAAAAGCTTAATCCTCACGAGCATCCTGTTCTGCACTCTGACCAGGGATGGCAGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAA", + "dna_sequence_length": 852, + "functions": [ + "IS150 transposase B" + ], + "id": "CDS_3497", + "location": [ + [ + "NC_000913", + 3721198, + "+", + 852 + ] + ], + "md5": "c902c3cab800012fc62b727383726630", + "parent_gene": "", + "protein_md5": "9578529d28e8fa506eb04349ac75f63f", + "protein_translation": "MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMPRV", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011624" + ], + [ + "gene_synonym", + "ECK3547" + ], + [ + "gene_synonym", + "EcoGene:EG10410" + ], + [ + "gene_synonym", + "GI:16131430" + ], + [ + "gene_synonym", + "GeneID:948080" + ], + [ + "gene_synonym", + "JW3530" + ], + [ + "gene_synonym", + "NP_418016.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00961" + ], + [ + "gene_synonym", + "b3559" + ], + [ + "gene_synonym", + "gly-act" + ], + [ + "gene_synonym", + "glyS" + ] + ], + "dna_sequence": "ATGTCTGAGAAAACTTTTCTGGTGGAAATCGGCACTGAAGAGCTGCCACCAAAAGCACTGCGCAGCCTGGCTGAGTCCTTTGCTGCGAACTTTACTGCGGAGCTGGATAACGCTGGCCTCGCACACGGCACCGTTCAATGGTTTGCTGCTCCGCGTCGTCTGGCGCTGAAAGTAGCTAACCTGGCGGAAGCGCAACCGGATCGTGAAATCGAAAAACGCGGCCCGGCGATTGCCCAGGCGTTCGACGCTGAAGGCAAACCGAGCAAAGCGGCAGAAGGTTGGGCGCGTGGTTGCGGTATTACCGTTGACCAGGCTGAGCGTCTGACTACCGATAAAGGCGAATGGCTGCTGTATCGCGCCCATGTGAAGGGCGAAAGCACCGAAGCACTGCTGCCGAATATGGTTGCGACTTCTCTGGCGAAACTGCCGATCCCGAAACTGATGCGTTGGGGCGCAAGCGACGTGCACTTCGTGCGTCCGGTGCACACCGTGACCCTGCTGCTGGGCGACAAAGTCATTCCGGCAACCATTCTGGGCATTCAGTCCGATCGCGTGATTCGCGGCCACCGCTTTATGGGCGAGCCGGAATTCACCATCGATAACGCCGATCAGTATCCGGAAATTCTGCGTGAGCGTGGGAAAGTCATCGCCGATTACGAAGAACGTAAGGCGAAGATTAAAGCCGATGCCGAAGAAGCAGCGCGTAAGATTGGCGGTAACGCTGACTTAAGCGAAAGCCTGCTGGAAGAAGTGGCTTCGCTGGTGGAGTGGCCGGTCGTTCTGACCGCAAAATTCGAAGAGAAATTCCTCGCGGTGCCGGCTGAAGCGCTGGTTTACACCATGAAAGGTGACCAGAAATACTTCCCGGTGTATGCGAACGACGGCAAACTGCTGCCGAACTTTATCTTCGTTGCCAACATCGAATCGAAAGATCCGCAGCAGATTATCTCCGGTAACGAGAAAGTCGTTCGTCCGCGTCTGGCGGATGCCGAGTTCTTCTTCAACACCGACCGTAAAAAACGTCTTGAAGATAACCTGCCGCGCCTGCAAACCGTGTTGTTCCAGCAACAGTTGGGGACGCTGCGCGACAAAACTGACCGCATCCAGGCGCTGGCTGGCTGGATTGCTGAACAGATTGGCGCTGACGTTAACCACGCTACCCGTGCGGGTCTGCTGTCTAAGTGCGACCTGATGACCAACATGGTCTTCGAGTTCACCGACACCCAGGGCGTTATGGGGATGCACTATGCGCGTCACGATGGCGAAGCGGAAGATGTCGCGGTGGCGCTGAATGAGCAGTATCAGCCGCGTTTTGCTGGTGATGACCTGCCGTCCAACCCAGTAGCTTGTGCGCTGGCGATTGCTGACAAGATGGATACCCTGGCGGGTATCTTCGGTATCGGTCAGCATCCGAAAGGCGACAAAGACCCGTTTGCGCTGCGTCGTGCCGCGCTTGGCGTGCTGCGAATTATCGTTGAGAAGAACCTCAACCTTGATCTGCAAACGCTGACCGAAGAAGCGGTGCGTCTGTATGGCGATAAGCTGACTAATGCCAACGTAGTTGATGATGTTATCGACTTTATGCTCGGTCGCTTCCGCGCCTGGTATCAGGACGAAGGTTATACCGTTGACACCATCCAGGCGGTACTGGCGCGTCGTCCGACTCGTCCGGCTGATTTCGATGCCCGTATGAAAGCGGTATCGCATTTCCGTACCCTGGATGCAGCTGCTGCACTGGCGGCGGCGAACAAACGTGTATCTAACATTCTGGCGAAATCTGACGAAGTGCTGAGCGACCGCGTGAATGCCTCTACCCTGAAAGAGCCGGAAGAAATTAAACTGGCGATGCAGGTTGTGGTGCTACGTGACAAGCTGGAGCCGTACTTTACGGAAGGTCGTTACCAGGATGCGCTGGTCGAACTGGCTGAGCTGCGTGAACCGGTTGATGCTTTCTTCGATAAAGTGATGGTCATGGTTGATGACAAAGAATTGCGTATCAACCGTCTGACCATGCTGGAGAAACTGCGCGAACTGTTCCTGCGCGTTGCGGATATTTCGCTGTTGCAATAA", + "dna_sequence_length": 2070, + "functions": [ + "glycine tRNA synthetase, beta subunit" + ], + "id": "CDS_3498", + "location": [ + [ + "NC_000913", + 3724397, + "-", + 2070 + ] + ], + "md5": "bdc590acbeac997e7dfe238b7cac1060", + "parent_gene": "", + "protein_md5": "2edc2c6fef1d85dd7c17edb06208498b", + "protein_translation": "MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ", + "protein_translation_length": 689, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011626" + ], + [ + "gene_synonym", + "ECK3548" + ], + [ + "gene_synonym", + "EcoGene:EG10409" + ], + [ + "gene_synonym", + "GI:16131431" + ], + [ + "gene_synonym", + "GeneID:948079" + ], + [ + "gene_synonym", + "JW3531" + ], + [ + "gene_synonym", + "NP_418017.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00960" + ], + [ + "gene_synonym", + "b3560" + ], + [ + "gene_synonym", + "cfcA" + ], + [ + "gene_synonym", + "glyQ" + ], + [ + "gene_synonym", + "glyS" + ] + ], + "dna_sequence": "ATGCAAAAGTTTGATACCAGGACCTTCCAGGGCTTGATCCTGACCTTACAGGATTACTGGGCTCGCCAGGGCTGCACCATTGTTCAACCATTGGACATGGAAGTCGGCGCGGGAACCTCTCACCCAATGACCTGTCTGCGCGAGCTGGGGCCAGAACCGATGGCGGCTGCTTATGTTCAGCCTTCTCGTCGCCCGACCGATGGTCGCTACGGCGAAAACCCCAACCGTTTACAGCACTACTATCAGTTCCAGGTGGTCATTAAGCCATCGCCGGACAATATTCAGGAGCTGTACCTCGGTTCTCTGAAAGAGCTGGGCATGGACCCGACTATTCACGACATCCGTTTCGTGGAAGATAACTGGGAAAACCCGACGCTGGGTGCCTGGGGACTGGGCTGGGAAGTGTGGCTGAACGGCATGGAAGTGACGCAGTTCACTTACTTCCAGCAGGTTGGTGGTCTGGAGTGTAAACCGGTTACCGGCGAGATCACCTACGGTCTGGAACGTCTGGCCATGTACATTCAGGGCGTAGACAGCGTTTACGACCTGGTCTGGAGCGACGGCCCGCTGGGTAAAACCACCTACGGCGACGTGTTCCATCAGAACGAAGTGGAGCAGTCCACTTACAACTTCGAATACGCGGATGTGGACTTCCTGTTCACCTGCTTCGAGCAGTACGAGAAAGAAGCGCAGCAGCTGCTGGCGCTGGAAAATCCGCTGCCGCTGCCAGCCTACGAGCGTATTCTGAAAGCCGCCCACAGCTTCAACCTGCTGGATGCGCGTAAAGCCATCTCCGTCACCGAGCGTCAGCGCTACATTCTGCGCATTCGCACCCTGACCAAAGCAGTGGCAGAAGCATACTACGCTTCCCGTGAAGCCCTCGGCTTCCCGATGTGCAACAAAGATAAGTAA", + "dna_sequence_length": 912, + "functions": [ + "glycine tRNA synthetase, alpha subunit" + ], + "id": "CDS_3499", + "location": [ + [ + "NC_000913", + 3725318, + "-", + 912 + ] + ], + "md5": "9d1976e1f8a0243d8dc6e99d6c831fb1", + "parent_gene": "", + "protein_md5": "4f3be65d3506acd42538ea72f62baa95", + "protein_translation": "MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285074" + ], + [ + "gene_synonym", + "ECK3549" + ], + [ + "gene_synonym", + "EcoGene:EG14400" + ], + [ + "gene_synonym", + "GI:94541126" + ], + [ + "gene_synonym", + "GeneID:1450292" + ], + [ + "gene_synonym", + "JW3532" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2M7M3" + ], + [ + "gene_synonym", + "YP_588469.1" + ], + [ + "gene_synonym", + "b4553" + ], + [ + "gene_synonym", + "ysaB" + ] + ], + "dna_sequence": "ATGATGATGAACGCTTTCTTTCCGGCAATGGCGCTTATGGTGCTAGTGGGTTGTTCTATACCGTCACCCGTGCAGAAAGCACAACGGGTAAAGGTTGATCCTCTGCGTTCGTTGAATATGGAAGCGTTATGCAAGGATCAGGCGGCAAAACGTTATAACACCGGCGAGCAAAAAATCGACGTCACCGCCTTCGAACAGTTCCAGGGAAGCTATGAAATGCGCGGTTATACCTTCCGTAAAGAGCAGTTTGTCTGTTCTTTTGACGCGGATGGCCATTTTTTGCATCTTTCCATGCGTTAA", + "dna_sequence_length": 300, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3500", + "location": [ + [ + "NC_000913", + 3725712, + "-", + 300 + ] + ], + "md5": "b937f1b2d0983c6c3743b82dde001903", + "parent_gene": "", + "protein_md5": "92010e6a65242879d952d15f1a9a47f3", + "protein_translation": "MMMNAFFPAMALMVLVGCSIPSPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011630" + ], + [ + "gene_synonym", + "ECK3550" + ], + [ + "gene_synonym", + "EcoGene:EG12274" + ], + [ + "gene_synonym", + "GI:16131432" + ], + [ + "gene_synonym", + "GeneID:948077" + ], + [ + "gene_synonym", + "JW3533" + ], + [ + "gene_synonym", + "NP_418018.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37669" + ], + [ + "gene_synonym", + "b3561" + ], + [ + "gene_synonym", + "wecH" + ], + [ + "gene_synonym", + "yiaH" + ] + ], + "dna_sequence": "ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCACACCACTACCTGGTATGTGACCAATGCTCATAGTGTTAGCCCCGTCACATGGGATATCGCCAATGTTCTGAATTCTGCCTCTCGTGTCAGCGTGCCGCTATTTTTCATGATTTCCGGCTATCTCTTTTTTGGCGAACGCAGCGCCCAGCCGCGCCATTTCTTGCGTATCGGCTTATGTCTGATTTTTTATAGCGCAATCGCACTGCTCTACATTGCGCTGTTTACCTCCATCAATATGGAGTTAGCGCTGAAAAACCTGCTGCAAAAGCCAGTGTTTTACCACTTGTGGTTTTTCTTCGCGATTGCGGTGATTTATCTGGTTTCACCGCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTGCTAATGGCGGTGATTGGCATTATCGCTAACCCAAACACAGTGCCGCAGAAAATTGACGGTTTTGAATGGCTGCCAATTAACTTATATATCAATGGCGATACTTTTTACTACATTCTGTATGGCATGTTGGGCCGCGCTATAGGGATGATGGACACACAGCATAAAGCACTGTCGTGGGTGAGCGCCGCGCTGTTTGCGACGGGGGTTTTTATTATCTCTCGCGGGACATTATATGAATTGCAGTGGCGCGGAAATTTTGCCGATACCTGGTATCTTTACTGTGGGCCGATGGTTTTTATCTGCGCAATCGCGCTATTGACTCTGGTTAAAAACACGCTGGATACGCGTACCATTCGCGGACTTGGCTTAATCTCCCGCCATTCATTGGGTATATACGGATTCCACGCCTTGATTATCCATGCGCTGCGCACCCGGGGAATTGAGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAA", + "dna_sequence_length": 996, + "functions": [ + "O-acetyltransferase for enterobacterial common antigen (ECA)" + ], + "id": "CDS_3501", + "location": [ + [ + "NC_000913", + 3725887, + "+", + 996 + ] + ], + "md5": "5105c868c49fd9244dd812fad5faeecd", + "parent_gene": "", + "protein_md5": "24a9a6f693fb27ea4dd299486ff6398b", + "protein_translation": "MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011632" + ], + [ + "gene_synonym", + "ECK3551" + ], + [ + "gene_synonym", + "EcoGene:EG11186" + ], + [ + "gene_synonym", + "GI:90111616" + ], + [ + "gene_synonym", + "GeneID:948078" + ], + [ + "gene_synonym", + "JW3534" + ], + [ + "gene_synonym", + "NP_418019.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADJ8" + ], + [ + "gene_synonym", + "b3562" + ], + [ + "gene_synonym", + "yiaA" + ] + ], + "dna_sequence": "ATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTATCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTTCTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGCCTGACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGCGAAAAAGGTTTTTATGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAAAATATTCGTGATGCCGGAATAAACCCACCAAAAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA", + "dna_sequence_length": 438, + "functions": [ + "YiaAB family inner membrane protein, tandem domains" + ], + "id": "CDS_3502", + "location": [ + [ + "NC_000913", + 3727361, + "-", + 438 + ] + ], + "md5": "7328da6b1107d9cd5ebf7780281923dd", + "parent_gene": "", + "protein_md5": "442cacac4b05bd9bbbd47ce5e97f840e", + "protein_translation": "MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011634" + ], + [ + "gene_synonym", + "ECK3552" + ], + [ + "gene_synonym", + "EcoGene:EG11267" + ], + [ + "gene_synonym", + "GI:90111617" + ], + [ + "gene_synonym", + "GeneID:948152" + ], + [ + "gene_synonym", + "JW5654" + ], + [ + "gene_synonym", + "NP_418020.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11286" + ], + [ + "gene_synonym", + "b3563" + ], + [ + "gene_synonym", + "yiaB" + ] + ], + "dna_sequence": "ATGAAAACCTCAAAGACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCTATGGATCTCATGCCCATTGTTAAGTGGAAAAGGCTATTTTCTTGGCGTGTTAATGACAGCAACTTTTGGCAACTATGCATATCTTCGCGCAGAAAAACTCGGGCAACTGGATGATTTTTTTACCCATATCTGCCAGTTAGTTGCGTTAATCACTATCGGTCTCTTGTTTATCGGTGTTTTAAACGCACCTATCAATACTTATGAAATGGTGATCTATCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGCATGA", + "dna_sequence_length": 342, + "functions": [ + "YiaAB family inner membrane protein" + ], + "id": "CDS_3503", + "location": [ + [ + "NC_000913", + 3727748, + "-", + 342 + ] + ], + "md5": "22f13afe33fa163db21807b9b80bec88", + "parent_gene": "", + "protein_md5": "b35b745ff72ec9fc3114a4af1c25c91f", + "protein_translation": "MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011637" + ], + [ + "gene_synonym", + "ECK3553" + ], + [ + "gene_synonym", + "EcoGene:EG11075" + ], + [ + "gene_synonym", + "GI:16131435" + ], + [ + "gene_synonym", + "GeneID:948133" + ], + [ + "gene_synonym", + "JW3536" + ], + [ + "gene_synonym", + "NP_418021.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09099" + ], + [ + "gene_synonym", + "b3564" + ], + [ + "gene_synonym", + "xylB" + ] + ], + "dna_sequence": "ATGTATATCGGGATAGATCTTGGCACCTCGGGCGTAAAAGTTATTTTGCTCAACGAGCAGGGTGAGGTGGTTGCTGCGCAAACGGAAAAGCTGACCGTTTCGCGCCCGCATCCACTCTGGTCGGAACAAGACCCGGAACAGTGGTGGCAGGCAACTGATCGCGCAATGAAAGCTCTGGGCGATCAGCATTCTCTGCAGGACGTTAAAGCATTGGGTATTGCCGGCCAGATGCACGGAGCAACCTTGCTGGATGCTCAGCAACGGGTGTTACGCCCTGCCATTTTGTGGAACGACGGGCGCTGTGCGCAAGAGTGCACTTTGCTGGAAGCGCGAGTTCCGCAATCGCGGGTGATTACCGGCAACCTGATGATGCCCGGATTTACTGCGCCTAAATTGCTATGGGTTCAGCGGCATGAGCCGGAGATATTCCGTCAAATCGACAAAGTATTATTACCGAAAGATTACTTGCGTCTGCGTATGACGGGGGAGTTTGCCAGCGATATGTCTGACGCAGCTGGCACCATGTGGCTGGATGTCGCAAAGCGTGACTGGAGTGACGTCATGCTGCAGGCTTGCGACTTATCTCGTGACCAGATGCCCGCATTATACGAAGGCAGCGAAATTACTGGTGCTTTGTTACCTGAAGTTGCGAAAGCGTGGGGTATGGCGACGGTGCCAGTTGTCGCAGGCGGTGGCGACAATGCAGCTGGTGCAGTTGGTGTGGGAATGGTTGATGCTAATCAGGCAATGTTATCGCTGGGGACGTCGGGGGTCTATTTTGCTGTCAGCGAAGGGTTCTTAAGCAAGCCAGAAAGCGCCGTACATAGCTTTTGCCATGCGCTACCGCAACGTTGGCATTTAATGTCTGTGATGCTGAGTGCAGCGTCGTGTCTGGATTGGGCCGCGAAATTAACCGGCCTGAGCAATGTCCCAGCTTTAATCGCTGCAGCTCAACAGGCTGATGAAAGTGCCGAGCCAGTTTGGTTTCTGCCTTATCTTTCCGGCGAGCGTACGCCACACAATAATCCCCAGGCGAAGGGGGTTTTCTTTGGTTTGACTCATCAACATGGCCCCAATGAACTGGCGCGAGCAGTGCTGGAAGGCGTGGGTTATGCGCTGGCAGATGGCATGGATGTCGTGCATGCCTGCGGTATTAAACCGCAAAGTGTTACGTTGATTGGGGGCGGGGCGCGTAGTGAGTACTGGCGTCAGATGCTGGCGGATATCAGCGGTCAGCAGCTCGATTACCGTACGGGGGGGGATGTGGGGCCAGCACTGGGCGCAGCAAGGCTGGCGCAGATCGCGGCGAATCCAGAGAAATCGCTCATTGAATTGTTGCCGCAACTACCGTTAGAACAGTCGCATCTACCAGATGCGCAGCGTTATGCCGCTTATCAGCCACGACGAGAAACGTTCCGTCGCCTCTATCAGCAACTTCTGCCATTAATGGCGTAA", + "dna_sequence_length": 1455, + "functions": [ + "xylulokinase" + ], + "id": "CDS_3504", + "location": [ + [ + "NC_000913", + 3729371, + "-", + 1455 + ] + ], + "md5": "3766c3ff7ef012185ec9e9b3b5717335", + "parent_gene": "", + "protein_md5": "4f9001d2fe0e53e02c47bc828b59a67f", + "protein_translation": "MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA", + "protein_translation_length": 484, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011639" + ], + [ + "gene_synonym", + "ECK3554" + ], + [ + "gene_synonym", + "EcoGene:EG11074" + ], + [ + "gene_synonym", + "GI:16131436" + ], + [ + "gene_synonym", + "GeneID:948141" + ], + [ + "gene_synonym", + "JW3537" + ], + [ + "gene_synonym", + "NP_418022.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00944" + ], + [ + "gene_synonym", + "b3565" + ], + [ + "gene_synonym", + "xylA" + ] + ], + "dna_sequence": "ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTACAATCCCGACGAACTGGTGTTGGGTAAGCGTATGGAAGAGCACTTGCGTTTTGCCGCCTGCTACTGGCACACCTTCTGCTGGAACGGGGCGGATATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAGCGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCCCCTGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTCCTGGCAGGCAAGCAAGAAGAGAGCGGCGTGAAGCTGCTGTGGGGAACGGCCAACTGCTTTACAAACCCTCGCTACGGCGCGGGTGCGGCGACGAACCCAGATCCTGAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGCGGTGAAAACTATGTCCTGTGGGGCGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGACTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGCAGATGGTGGTTGAGCATAAACATAAAATCGGTTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACCAAACATCAATATGATTACGATGCCGCGACGGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACATTGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTTCTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTGGTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTACTGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCACTGGCGCTGAAAATTGCAGCGCGCATGATTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAAGGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATCATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGAACAACTGGAAAATCTGGTAAACCATTATCTGTTCGACAAATAA", + "dna_sequence_length": 1323, + "functions": [ + "D-xylose isomerase" + ], + "id": "CDS_3505", + "location": [ + [ + "NC_000913", + 3730765, + "-", + 1323 + ] + ], + "md5": "8f792077f78fea52811e2cb619fcfd55", + "parent_gene": "", + "protein_md5": "547b8ae97de5f7bdf88ee5887850c66e", + "protein_translation": "MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHHLSPVHQSGRQEQLENLVNHYLFDK", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011646" + ], + [ + "gene_synonym", + "ECK3555" + ], + [ + "gene_synonym", + "EcoGene:EG20252" + ], + [ + "gene_synonym", + "GI:16131437" + ], + [ + "gene_synonym", + "GeneID:948090" + ], + [ + "gene_synonym", + "JW3538" + ], + [ + "gene_synonym", + "NP_418023.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37387" + ], + [ + "gene_synonym", + "b3566" + ], + [ + "gene_synonym", + "xylF" + ], + [ + "gene_synonym", + "xylT" + ] + ], + "dna_sequence": "ATGAAAATAAAGAACATTCTACTCACCCTTTGCACCTCACTCCTGCTTACCAACGTTGCTGCACACGCCAAAGAAGTCAAAATAGGTATGGCGATTGATGATCTCCGTCTTGAACGCTGGCAAAAAGATCGAGATATCTTTGTGAAAAAGGCAGAATCTCTCGGCGCGAAAGTATTTGTACAGTCTGCAAATGGCAATGAAGAAACACAAATGTCGCAGATTGAAAACATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATTCCGGAAAAATTAAAGTCGTTGGTGACCAATGGGTTGATGGCTGGTTACCGGAAAACGCATTGAAAATTATGGAAAACGCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAA", + "dna_sequence_length": 993, + "functions": [ + "D-xylose transporter subunit" + ], + "id": "CDS_3506", + "location": [ + [ + "NC_000913", + 3731131, + "+", + 993 + ] + ], + "md5": "18ba9bfeeee1c6131ebffb1277e7103d", + "parent_gene": "", + "protein_md5": "9e37d82f87e534925975eadfe2674218", + "protein_translation": "MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011648" + ], + [ + "gene_synonym", + "ECK3556" + ], + [ + "gene_synonym", + "EcoGene:EG12275" + ], + [ + "gene_synonym", + "GI:16131438" + ], + [ + "gene_synonym", + "GeneID:948127" + ], + [ + "gene_synonym", + "JW3539" + ], + [ + "gene_synonym", + "NP_418024.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37388" + ], + [ + "gene_synonym", + "b3567" + ], + [ + "gene_synonym", + "xylG" + ] + ], + "dna_sequence": "ATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTGTCAGAAGCTGCTCGCACAGGTCAGTTTATCCATTTCACCTGATACCCGCGTTGGCGATTTAGGGCTTGGGCAACAACAACTGGTTGAAATTGCCAAGGCACTTAATAAACAGGTGCGCTTGTTAATTCTCGATGAACCGACAGCCTCATTAACTGAGCAGGAAACGTCGATTTTACTGGATATTATTCGCGATCTACAACAGCACGGTATCGCCTGTATTTATATTTCGCACAAACTCAACGAAGTCAAAGCGATTTCCGATACGATTTGCGTTATTCGCGACGGACAGCACATTGGTACGCGTGATGCTGCCGGAATGAGTGAAGACGATATTATCACCATGATGGTCGGGCGAGAGTTAACCGCGCTTTACCCTAATGAACCACATACCACCGGAGATGAAATATTACGTATTGAACATCTGACGGCATGGCATCCGGTTAATCGTCATATTAAACGAGTTAATGATGTCTCGTTTTCCCTGAAACGTGGCGAAATATTGGGTATTGCCGGACTCGTTGGTGCCGGACGTACCGAGACCATTCAGTGCCTGTTTGGTGTGTGGCCCGGACAATGGGAAGGAAAAATTTATATTGATGGCAAACAGGTAGATATTCGTAACTGTCAGCAAGCCATCGCCCAGGGGATTGCGATGGTCCCCGAAGACAGAAAGCGCGACGGCATCGTTCCGGTAATGGCGGTTGGTAAAAATATTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATTGTCATCTCTTCCGAATTACCTGAAGTGCTCGGCCTTAGCGATCGTGTACTGGTGATGCATGAAGGGAAACTAAAAGCCAACCTGATAAATCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGA", + "dna_sequence_length": 1542, + "functions": [ + "D-xylose ABC transporter dual domain ATPase" + ], + "id": "CDS_3507", + "location": [ + [ + "NC_000913", + 3732201, + "+", + 1542 + ] + ], + "md5": "bd7d578ec7d3196fab88ab95cb0eec01", + "parent_gene": "", + "protein_md5": "6992519dd8bb5850146e8a3e96a2aba8", + "protein_translation": "MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHVEKQSV", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011650" + ], + [ + "gene_synonym", + "ECK3557" + ], + [ + "gene_synonym", + "EcoGene:EG12276" + ], + [ + "gene_synonym", + "GI:16131439" + ], + [ + "gene_synonym", + "GeneID:948083" + ], + [ + "gene_synonym", + "JW3540" + ], + [ + "gene_synonym", + "NP_418025.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI4" + ], + [ + "gene_synonym", + "b3568" + ], + [ + "gene_synonym", + "xylH" + ] + ], + "dna_sequence": "ATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGTACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGATGGTGGGTCGCGTACCGTAAAGTCCCTTCATTTATTGTCACCCTCGCGGGCATGTTGGCATTTCGCGGCATACTCATTGGCATCACCAACGGCACGACTGTATCCCCCACCAGCGCCGCGATGTCACAAATTGGGCAAAGCTATCTCCCCGCCAGTACCGGCTTCATCATTGGCGCGCTTGGCTTAATGGCTTTTGTTGGTTGGCAATGGCGCGGAAGAATGCGCCGTCAGGCTTTGGGTTTACAGTCTCCGGCCTCTACCGCAGTAGTCGGTCGCCAGGCTTTAACCGCTATCATCGTATTAGGCGCAATCTGGCTGTTGAATGATTACCGTGGCGTTCCCACTCCTGTTCTGCTGCTGACGTTGCTGTTACTCGGCGGAATGTTTATGGCAACGCGGACGGCATTTGGACGACGCATTTATGCCATCGGCGGCAATCTGGAAGCAGCACGTCTCTCCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGACGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGA", + "dna_sequence_length": 1182, + "functions": [ + "D-xylose ABC transporter permease" + ], + "id": "CDS_3508", + "location": [ + [ + "NC_000913", + 3733720, + "+", + 1182 + ] + ], + "md5": "d27999ce979f472c96091197173cfb50", + "parent_gene": "", + "protein_md5": "4f7ef4f0d7fc188abb5ab29c6fbe5bc0", + "protein_translation": "MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011652" + ], + [ + "gene_synonym", + "ECK3558" + ], + [ + "gene_synonym", + "EcoGene:EG20253" + ], + [ + "gene_synonym", + "GI:16131440" + ], + [ + "gene_synonym", + "GeneID:948086" + ], + [ + "gene_synonym", + "JW3541" + ], + [ + "gene_synonym", + "NP_418026.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACI3" + ], + [ + "gene_synonym", + "b3569" + ], + [ + "gene_synonym", + "xylR" + ] + ], + "dna_sequence": "ATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTACCACCGCAAACCGGGATTATTGCCGTTACTGACGCCCGAGCGCGGCATATTCTGCAAGTATGTGAACATCTACATATTCCCGTACCGGAAAAATTATGCGTGATTGGCATCGATAACGAAGAACTGACCCGCTATCTGTCGCGTGTCGCCCTTTCTTCGGTCGCTCAGGGCGCGCGGCAAATGGGCTATCAGGCGGCAAAACTGTTGCATCGATTATTAGATAAAGAAGAAATGCCGCTACAGCGAATTTTGGTCCCACCAGTTCGCGTCATTGAACGGCGCTCAACAGATTATCGCTCGCTGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTCGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACCATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGACACGACGCCAAAAGAGTATCGCGATGTAAATAGCGAGGTCATGTTGTAG", + "dna_sequence_length": 1179, + "functions": [ + "xylose divergent operon transcriptional activator" + ], + "id": "CDS_3509", + "location": [ + [ + "NC_000913", + 3734979, + "+", + 1179 + ] + ], + "md5": "f277b80ebe913826887a1015cdfcbaaf", + "parent_gene": "", + "protein_md5": "00a82d6c6e0d7f1ab456ff684a37cabf", + "protein_translation": "MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011655" + ], + [ + "gene_synonym", + "ECK3559" + ], + [ + "gene_synonym", + "EcoGene:EG11360" + ], + [ + "gene_synonym", + "GI:49176373" + ], + [ + "gene_synonym", + "GeneID:948089" + ], + [ + "gene_synonym", + "JW5653" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27297" + ], + [ + "gene_synonym", + "YP_026230.1" + ], + [ + "gene_synonym", + "b3570" + ], + [ + "gene_synonym", + "bax" + ] + ], + "dna_sequence": "ATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAAACAGGTAAGCAGTAAACAAGAGTATTCTCGCAATAGTGCAAAGAGTAGTTCACTTCCTGATTTGCGAAAATACCCTTCCGGAACACCAAGGAAAAAGGCGTTTCTCCGGACCGTAATGCCTTACATTACCAGCCAAAATGCGGCCATTACTGCGGAACGTAACTGGCTCATTTCAAAACAGTATCAGGGCCAATGGTCACCTGCTGAGCGTGCGCGTCTGAAAGACATCGCCAAACGCTACAAGGTGAAGTGGTCCGGTAATACGCGAAAAATCCCGTGGAATACCTTGCTTGAACGCGTAGACATTATCCCCACCAGTATGGTGGCGACGATGGCTGCAGCAGAAAGCGGTTGGGGAACGTCGAAGCTGGCGCGCAACAACAACAACCTGTTCGGCATGAAATGCATGAAAGGACGTTGTACCAATGCGCCAGGTAAAGTGAAAGGGTACTCACAGTTTAGTTCTGTCAAAGAATCGGTGAGCGCCTATGTCACTAACCTGAATACGCACCCGGCTTACTCTTCGTTCCGTAAATCGCGTGCGCAGCTGCGTAAAGCGGATCAGGAAGTGACTGCCACAGCGATGATTCACAAGCTGAAGGGCTACTCGACCAAAGGGAAGAGTTATAACAACTACCTGTTCGCAATGTACCAGGATAACCAACGGTTAATCGCGGCGCATATGTAA", + "dna_sequence_length": 825, + "functions": [ + "putative glucosaminidase" + ], + "id": "CDS_3510", + "location": [ + [ + "NC_000913", + 3737177, + "-", + 825 + ] + ], + "md5": "eb1f8dc2799f4e1f6b5db0fe06f31926", + "parent_gene": "", + "protein_md5": "569cf1feac98281f8232aeb1a75b1cc6", + "protein_translation": "MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011668" + ], + [ + "gene_synonym", + "ECK3560" + ], + [ + "gene_synonym", + "EcoGene:EG11316" + ], + [ + "gene_synonym", + "GI:16131442" + ], + [ + "gene_synonym", + "GeneID:948088" + ], + [ + "gene_synonym", + "JW3543" + ], + [ + "gene_synonym", + "NP_418028.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25718" + ], + [ + "gene_synonym", + "b3571" + ], + [ + "gene_synonym", + "malS" + ] + ], + "dna_sequence": "ATGAAACTCGCCGCCTGTTTTCTGACACTCCTTCCTGGCTTCGCCGTTGCCGCCAGCTGGACTTCTCCGGGGTTTCCCGCCTTTAGCGAACAGGGGACAGGAACATTTGTCAGCCACGCGCAGTTGCCCAAAGGTACGCGTCCACTAACGCTAAATTTTGACCAACAGTGCTGGCAGCCTGCGGATGCGATAAAACTCAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACCGCTCACAGTGGATGTCAGCGCCACTTTCCCGGAAGGAGCCGCCGTACGGGATTATTACAGCCAGCAAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGACGTCATAAAGACGGTATGGCGGAAATTGGCACTTTTCACGGCGGCGATTTACGCGGCCTGACCAACAAACTGGATTACCTCCAGCAGTTGGGCGTTAATGCTTTATGGATAAGCGCCCCATTTGAGCAAATTCACGGCTGGGTCGGCGGCGGTACAAAAGGCGATTTCCCGCATTATGCCTACCACGGTTATTACACACAGGACTGGACGAATCTTGATGCCAATATGGGCAACGAAGCCGATCTACGGACGCTGGTTGATAGCGCACATCAGCGCGGTATTCGTATTCTCTTTGATGTCGTGATGAACCACACCGGCTATGCCACGCTGGCGGATATGCAGGAGTATCAGTTTGGCGCGTTATATCTTTCTGGTGACGAAGTGAAAAAATCGCTGGGTGAACGCTGGAGCGACTGGAAACCTGCCGCCGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACTACTATCGCCACGGCTTCGATGCGATGATCAATTTCGATTATCAGGAGCAGGCGGCGAAAGCAGTCGACTGTCTGGCGCAGATGGATACGACCTGGCAGCAAATGGCGGAGAAATTGCAGGGTTTCAACGTGTTGAGCTACCTCTCGTCGCATGATACCCGCCTGTTCCGTGAAGGGGGCGACAAAGCAGCAGAGTTATTACTATTAGCGCCAGGCGCGGTACAAATCTTTTATGGTGATGAATCCTCGCGTCCGTTCGGTCCTACAGGTTCTGATCCGCTGCAAGGTACACGTTCGGATATGAACTGGCAGGATGTTAGCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAA", + "dna_sequence_length": 2031, + "functions": [ + "alpha-amylase" + ], + "id": "CDS_3511", + "location": [ + [ + "NC_000913", + 3737497, + "+", + 2031 + ] + ], + "md5": "26bf61f226fd6d477c902503731ae563", + "parent_gene": "", + "protein_md5": "84f8a9ad5a4078cb37492e738061879f", + "protein_translation": "MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ", + "protein_translation_length": 676, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011671" + ], + [ + "gene_synonym", + "ECK3561" + ], + [ + "gene_synonym", + "EcoGene:EG10107" + ], + [ + "gene_synonym", + "GI:49176374" + ], + [ + "gene_synonym", + "GeneID:948087" + ], + [ + "gene_synonym", + "JW5652" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09053" + ], + [ + "gene_synonym", + "YP_026231.1" + ], + [ + "gene_synonym", + "avtA" + ], + [ + "gene_synonym", + "b3572" + ] + ], + "dna_sequence": "ATGACATTCTCCCTTTTTGGTGACAAATTTACCCGCCACTCCGGCATTACGCTGTTGATGGAAGATCTGAACGACGGTTTACGCACGCCTGGCGCGATTATGCTCGGCGGCGGTAATCCGGCGCAGATCCCGGAAATGCAGGACTACTTCCAGACGCTACTGACCGACATGCTGGAAAGTGGCAAAGCGACTGATGCACTGTGTAACTACGACGGTCCACAGGGGAAAACGGAGCTACTCACACTGCTTGCCGGAATGCTGCGCGAGAAGTTGGGTTGGGATATCGAACCACAGAATATTGCACTAACAAACGGCAGCCAGAGCGCGTTTTTCTACTTATTTAACCTGTTTGCCGGACGCCGTGCCGATGGTCGGGTCAAAAAAGTGCTGTTCCCGCTTGCACCGGAATACATTGGCTATGCTGACGCCGGACTGGAAGAAGATCTGTTTGTCTCTGCGCGTCCGAATATTGAACTGCTGCCGGAAGGCCAGTTTAAATACCACGTCGATTTTGAGCATCTGCATATTGGCGAAGAAACCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGAATCCGAATATCGTGCTGTGCATGAGTCTTTCCAAGCTGGGTCTACCTGGCTCCCGCTGCGGCATTATCATCGCCAATGAAAAAATCATCACCGCCATCACCAATATGAACGGCATTATCAGCCTGGCACCTGGCGGTATTGGTCCGGCGATGATGTGTGAAATGATTAAGCGTAACGATCTGCTGCGCCTGTCTGAAACAGTCATCAAACCGTTTTACTACCAGCGTGTTCAGGAAACTATCGCCATCATTCGCCGCTATTTACCGGAAAATCGCTGCCTGATTCATAAACCGGAAGGAGCCATTTTCCTCTGGCTATGGTTTAAGGATTTGCCCATTACGACCAAGCAGCTCTATCAGCGCCTGAAAGCACGCGGCGTGCTGATGGTGCCGGGGCACAACTTCTTCCCAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAA", + "dna_sequence_length": 1254, + "functions": [ + "valine-pyruvate aminotransferase", + "transaminase C", + "alanine-valine transaminase" + ], + "id": "CDS_3512", + "location": [ + [ + "NC_000913", + 3739705, + "+", + 1254 + ] + ], + "md5": "d24444dd3832da79fd12084d1961f08e", + "parent_gene": "", + "protein_md5": "c95811e8027558cca647df885ac11204", + "protein_translation": "MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH", + "protein_translation_length": 417, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011674" + ], + [ + "gene_synonym", + "ECK3562" + ], + [ + "gene_synonym", + "EcoGene:EG14319" + ], + [ + "gene_synonym", + "GI:16131444" + ], + [ + "gene_synonym", + "GeneID:948085" + ], + [ + "gene_synonym", + "JW3545" + ], + [ + "gene_synonym", + "NP_418030.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56256" + ], + [ + "gene_synonym", + "b3573" + ], + [ + "gene_synonym", + "ysaA" + ] + ], + "dna_sequence": "ATGAACCGGTTTATTATTGCGGATGCGACGAAATGTATCGGTTGCCGTACCTGTGAAGTGGCTTGCGCAGTGTCGCATCATGAGAATCAGGATTGCGCTGCGTTGTCACCAGACGAGTTTATTTCCCGTATTCGTGTCATTAAAGACCACTGCTGGACCACGGCAGTAGCCTGTCATCAGTGTGAAGATGCACCGTGCGCGAATGTCTGCCCTGTTGACGCGATAAGCCGCGAACATGGGCATATTTTCGTTGAACAAACACGTTGCATTGGCTGTAAAAGCTGTATGCTGGCTTGCCCGTTTGGTGCGATGGAGGTCGTTTCTTCGCGCAAAAAGGCGAGGGCGATTAAGTGCGATCTGTGCTGGCATCGGGAGACGGGACCGGCCTGTGTTGAAGCCTGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGA", + "dna_sequence_length": 474, + "functions": [ + "putative hydrogenase, 4Fe-4S ferredoxin-type component" + ], + "id": "CDS_3513", + "location": [ + [ + "NC_000913", + 3741582, + "-", + 474 + ] + ], + "md5": "1fbdc7f3514979748fe30dfa7be36be8", + "parent_gene": "", + "protein_md5": "b21a15f1751161e95d1823853b8ce530", + "protein_translation": "MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011677" + ], + [ + "gene_synonym", + "ECK3563" + ], + [ + "gene_synonym", + "EcoGene:EG12278" + ], + [ + "gene_synonym", + "GI:16131445" + ], + [ + "gene_synonym", + "GeneID:948084" + ], + [ + "gene_synonym", + "JW3546" + ], + [ + "gene_synonym", + "NP_418031.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37671" + ], + [ + "gene_synonym", + "b3574" + ], + [ + "gene_synonym", + "yiaJ" + ] + ], + "dna_sequence": "ATGGGGAAAGAAGTGATGGGAAAAAAAGAGAACGAGATGGCGCAGGAAAAAGAGCGTCCAGCCGGAAGCCAGAGTCTGTTTCGCGGGTTGATGCTGATTGAGATTTTGAGCAACTATCCAAACGGTTGTCCGTTGGCGCATCTTTCGGAGCTGGCTGGTTTAAATAAGAGTACCGTCCATCGCTTATTGCAGGGATTACAGTCCTGCGGCTATGTGACCACCGCGCCTGCCGCAGGGAGTTATCGCCTGACCACCAAATTTATTGCCGTCGGGCAGAAGGCGCTGTCTTCGCTGAATATCATTCATATCGCCGCTCCGCATCTTGAGGCACTGAACATCGCCACTGGTGAAACCATTAACTTCTCCAGCCGCGAAGACGATCACGCTATTTTGATTTATAAGCTGGAACCCACAACCGGGATGCTGCGAACCCGTGCCTATATTGGCCAGCATATGCCGCTCTACTGTTCCGCAATGGGCAAGATCTACATGGCGTTTGGTCACCCGGACTACGTGAAGTCATACTGGGAAAGCCATCAGCATGAGATCCAGCCGTTAACCCGCAATACCATTACCGAGCTGCCCGCGATGTTCGACGAACTGGCGCACATTCGTGAAAGCGGAGCGGCGATGGACAGAGAAGAAAACGAACTCGGCGTCTCCTGTATTGCTGTTCCGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAA", + "dna_sequence_length": 849, + "functions": [ + "transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon" + ], + "id": "CDS_3514", + "location": [ + [ + "NC_000913", + 3742532, + "-", + 849 + ] + ], + "md5": "fddfcea9ac375994749a057c4305430d", + "parent_gene": "", + "protein_md5": "4f8e22a41df9a885a8f3de9ccf4c4266", + "protein_translation": "MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDLGAIT", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011682" + ], + [ + "gene_synonym", + "ECK3564" + ], + [ + "gene_synonym", + "EcoGene:EG12279" + ], + [ + "gene_synonym", + "GI:16131446" + ], + [ + "gene_synonym", + "GeneID:948096" + ], + [ + "gene_synonym", + "JW3547" + ], + [ + "gene_synonym", + "NP_418032.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37672" + ], + [ + "gene_synonym", + "b3575" + ], + [ + "gene_synonym", + "yiaK" + ] + ], + "dna_sequence": "ATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAATCGGGTCTTAATTTCACGCGGCGTTGACAGCGAAACGGCTGACGCCTGTGCAGAGATGTTCGCCCGCACCACCGAATCCGGCGTTTATTCTCACGGCGTTAATCGTTTCCCTCGTTTCATTCAACAACTGGAAAACGGCGATATCATTCCTGATGCCCAACCCAAACGTATAACCAGCCTCGGCGCAATTGAACAGTGGGACGCCCAGCGTTCGATCGGTAACCTGACAGCGAAAAAGATGATGGATCGCGCCATTGAACTGGCTGCCGATCACGGTATTGGTCTGGTGGCACTACGTAATGCCAACCACTGGATGCGCGGCGGCAGCTACGGCTGGCAGGCGGCGGAAAAAGGCTATATTGGCATTTGCTGGACCAACTCCATCGCCGTAATGCCGCCGTGGGGCGCAAAAGAGTGTCGCATAGGCACTAACCCGCTGATCGTCGCCATTCCTTCCACGCCGATCACCATGGTCGATATGTCGATGTCGATGTTCTCTTACGGCATGTTAGAAGTTAACCGTCTGGCAGGTCGTCAGCTCCCGGTCGATGGTGGCTTTGATGATGAGGGCAATTTGACCAAAGAACCTGGCGTTATCGAGAAGAATCGCCGCATTTTGCCGATGGGCTACTGGAAAGGTTCTGGCATGTCGATTGTGCTGGATATGATCGCTACTCTCCTTTCCGACGGCGCATCCGTTGCCGAAGTCACCCAGGACAACAGCGACGAATACGGCATTTCACAAATTTTTATTGCCATTGAAGTGGACAAGCTTATCGACGGTCCCACCCGCGATGCCAAGCTGCAACGCATCATGGATTACGTTACTAGTGCCGAGCGTGCTGACGAAAATCAGGCCATTCGCTTACCCGGCCATGAATTTACTACCCTGCTGGCCGAAAACCGCCGTAACGGCATCACTGTTGATGACAGCGTGTGGGCCAAAATCCAGGCGTTATGA", + "dna_sequence_length": 999, + "functions": [ + "2,3-diketo-L-gulonate reductase, NADH-dependent" + ], + "id": "CDS_3515", + "location": [ + [ + "NC_000913", + 3742733, + "+", + 999 + ] + ], + "md5": "b431dc2448215997052835f03620e818", + "parent_gene": "", + "protein_md5": "370d94848809cf71d304db4e5a11c8b3", + "protein_translation": "MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTSAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011684" + ], + [ + "gene_synonym", + "ECK3565" + ], + [ + "gene_synonym", + "EcoGene:EG12280" + ], + [ + "gene_synonym", + "GI:16131447" + ], + [ + "gene_synonym", + "GeneID:948094" + ], + [ + "gene_synonym", + "JW3548" + ], + [ + "gene_synonym", + "NP_418033.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37673" + ], + [ + "gene_synonym", + "b3576" + ], + [ + "gene_synonym", + "yiaL" + ] + ], + "dna_sequence": "ATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTATTGATACGGGAAATAATAAAGTCAGCGAATCACTATTAGAGCAGCGCAATATTATTTTTTATCACGACAGTGAACATGAATCATTTATAGAAATGATACCGGGCAGCTACGCAATTTTCTTTCCGCAGGATGTTCACCGACCAGGTTGTATTATGCAAACAGCCTCTGAGATACGAAAAATTGTGGTTAAAGTCGCATTAACGGCGCTGAATTAA", + "dna_sequence_length": 468, + "functions": [ + "DUF386 family protein" + ], + "id": "CDS_3516", + "location": [ + [ + "NC_000913", + 3743743, + "+", + 468 + ] + ], + "md5": "507fb93bff125ddf80cad7666c806c7a", + "parent_gene": "", + "protein_md5": "da354cf16538711e0089dc72b6ab149d", + "protein_translation": "MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVVEIDGKNIYTQIIDLTTREAVVNRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRNIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQTASEIRKIVVKVALTALN", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011690" + ], + [ + "gene_synonym", + "ECK3566" + ], + [ + "gene_synonym", + "EcoGene:EG12281" + ], + [ + "gene_synonym", + "GI:16131448" + ], + [ + "gene_synonym", + "GeneID:948093" + ], + [ + "gene_synonym", + "JW3549" + ], + [ + "gene_synonym", + "NP_418034.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37674" + ], + [ + "gene_synonym", + "b3577" + ], + [ + "gene_synonym", + "yiaM" + ] + ], + "dna_sequence": "ATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATGAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGTTACCCATTCCTTAATCTTATTTATTTGTGGCGCACTGGCCTGGGGCGCAACGCTAAAAACAATTCAGGACTGGAGCGATTATTCACCGATCCTCGGTTTACCCATCGGCCTGATGTATGCCGCTTGTCTGCCCACCAGCCTCGTTATCGCATTCTTTGAACTGCGTCATTTATATCAACTCATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAA", + "dna_sequence_length": 474, + "functions": [ + "2,3-diketo-L-gulonate TRAP transporter small permease protein" + ], + "id": "CDS_3517", + "location": [ + [ + "NC_000913", + 3744328, + "+", + 474 + ] + ], + "md5": "e31c4bfb5a3f53a03b6ef4e92f4a3f7d", + "parent_gene": "", + "protein_md5": "01f108b0405c572f66ecda6a8d48c448", + "protein_translation": "MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLKTIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011692" + ], + [ + "gene_synonym", + "ECK3567" + ], + [ + "gene_synonym", + "EcoGene:EG12282" + ], + [ + "gene_synonym", + "GI:49176375" + ], + [ + "gene_synonym", + "GeneID:948092" + ], + [ + "gene_synonym", + "JW5651" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37675" + ], + [ + "gene_synonym", + "YP_026232.1" + ], + [ + "gene_synonym", + "b3578" + ], + [ + "gene_synonym", + "yiaN" + ] + ], + "dna_sequence": "ATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTCAGTGGTTATGTTTCTGGTGGCCTCGGCACAAGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATGGATTTAACGCCGACGGTATTAATTCTTACCCCGGTATTAATGCCTTTAGTTAAAGAGGCAGGAATCGATCCGATTTATTTCGGTGTCATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAA", + "dna_sequence_length": 1278, + "functions": [ + "2,3-diketo-L-gulonate TRAP transporter large permease protein" + ], + "id": "CDS_3518", + "location": [ + [ + "NC_000913", + 3744804, + "+", + 1278 + ] + ], + "md5": "a3bd1565929e07292ad75b5f4194d780", + "parent_gene": "", + "protein_md5": "08e3e4efc07c62c5ce6f80dcb8837102", + "protein_translation": "MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011694" + ], + [ + "gene_synonym", + "ECK3568" + ], + [ + "gene_synonym", + "EcoGene:EG12283" + ], + [ + "gene_synonym", + "GI:16131450" + ], + [ + "gene_synonym", + "GeneID:948091" + ], + [ + "gene_synonym", + "JW3551" + ], + [ + "gene_synonym", + "NP_418036.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37676" + ], + [ + "gene_synonym", + "b3579" + ], + [ + "gene_synonym", + "yiaO" + ] + ], + "dna_sequence": "ATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACCAAAGGCGAGCTGAAATTAAAACTGTTCCCGGACAGCACTCTCGGTAACGCGCAGGCGATGATCAGCGGCGTACGTGGCGGCACCATCGATATGGAAATGTCCGGCTCGAATAACTTTGCCGGGTTATCACCAGTGATGAACTTGCTTGATGTCCCTTTCCTGTTCCGCGATACCGCTCACGCGCATAAAACGCTCGACGGCAAAGTCGGTGATGATCTGAAAGCCTCACTTGAAGGTAAAGGACTGAAAGTACTGGCCTACTGGGAAAACGGCTGGCGCGATGTCACCAACTCGCGCGCACCGGTTAAAACCCCCGCCGACCTGAAAGGGCTGAAAATCCGCACCAACAATAGCCCGATGAATATCGCCGCATTCAAAGTCTTTGGCGCTAACCCGATCCCGATGCCGTTTGCCGAAGTCTATACCGGGCTGGAAACCCGCACTATCGACGCTCAGGAACACCCGATCAACGTCGTCTGGTCAGCAAAATTTTTCGAAGTGCAGAAGTTCCTTTCTCTGACGCACCACGCCTATTCCCCGCTTCTGGTGGTGATCAACAAAGCGAAGTTTGATGGCTTAAGTCCGGAGTTCCAGCAGGCGCTAGTTTCATCTGCACAAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGGTGCAATAA", + "dna_sequence_length": 987, + "functions": [ + "2,3-diketo-L-gulonate-binding periplasmic protein" + ], + "id": "CDS_3519", + "location": [ + [ + "NC_000913", + 3746094, + "+", + 987 + ] + ], + "md5": "cf6efb40bc65ef05025eb5941c29f405", + "parent_gene": "", + "protein_md5": "1f5d91a0d4e75949debe411584efbf38", + "protein_translation": "MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011696" + ], + [ + "gene_synonym", + "ECK3569" + ], + [ + "gene_synonym", + "EcoGene:EG12284" + ], + [ + "gene_synonym", + "GI:16131451" + ], + [ + "gene_synonym", + "GeneID:948101" + ], + [ + "gene_synonym", + "JW3552" + ], + [ + "gene_synonym", + "NP_418037.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37677" + ], + [ + "gene_synonym", + "b3580" + ], + [ + "gene_synonym", + "lyx" + ], + [ + "gene_synonym", + "lyxK" + ], + [ + "gene_synonym", + "xylK" + ], + [ + "gene_synonym", + "yiaP" + ] + ], + "dna_sequence": "ATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGAAAGCCGGGCTGTATGACCGCGAAGGCCGGGAGGCAGGCGTGCAGCGCCTGCCGCTGTGCGCATTAAGCCCGCAGCCAGGCTGGGCAGAGCGCGATATGGCAGAACTGTGGCAATGCTGCATGGCTGTCATTCGCGCCCTGCTTACTCATTCTGGTGTTAGCGGGGAACAAATTGTCGGTATCGGCATCTCCGCACAGGGAAAGGGCTTGTTTTTGCTGGATAAAAACGACAAACCGCTCGGGAATGCTATTTTGTCCTCGGACCGCCGGGCGATGGAAATCGTTCGTCGCTGGCAGGAAGATGGCATCCCGGAAAAACTCTACCCGCTGACCCGACAAACCTTGTGGACCGGGCATCCGGTGTCGCTGTTACGCTGGCTGAAAGAGCACGAACCAGAACGCTACGCGCAAATTGGCTGCGTGATGATGACGCACGACTACCTGCGCTGGTGTTTAACTGGCGTCAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAAGCGGGTACGCCCGTTGTTGGCGGCCTGTTTGATGTGGTTTCCACCGCACTCTGCGCCGGGATCGAAGACGAATTTACCCTCAATGCGGTGATGGGGACCTGGGCGGTGACCAGCGGCATAACCCGCGGTTTACGTGACGGTGAAGCGCATCCGTATGTCTATGGTCGCTACGTTAACGATGGTGAATTTATCGTTCACGAAGCCAGCCCTACCTCTTCCGGCAACCTCGAATGGTTTACCGCACAGTGGGGAGAAATCTCGTTTGATGAGATCAATCAGGCCGTTGCCAGCTTGCCGAAGGCTGGGGGCGATCTCTTTTTCCTGCCGTTCCTGTACGGCAGCAACGCCGGACTCGAGATGACCAGTGGTTTCTACGGGATGCAGGCCATTCACACCCGCGCGCACCTGTTGCAGGCCATCTATGAAGGGGTGGTGTTCAGCCATATGACCCACCTCAACCGAATGCGCGAACGTTTTACTGATGTTCACACCCTACGCGTCACTGGCGGCCCGGCGCACTCCGATGTCTGGATGCAAATGCTGGCGGACGTCAGCGGTCTGCGTATCGAGCTGCCGCAGGTGGAAGAAACCGGCTGCTTTGGTGCGGCCCTTGCCGCCCGCGTCGGCACCGGGGTTTATCACAACTTCAGCGAAGCCCAACGTGACTTGCGACACCCGGTGCGCACCCTGCTGCCAGATATGACCGCCCATCAGCTTTACCAAAAAAAATATCAACGTTATCAGCATCTCATTGCCGCACTTCAGGGCTTTCACGCCCGCATTAAGGAGCACACATTATGA", + "dna_sequence_length": 1497, + "functions": [ + "L-xylulose kinase" + ], + "id": "CDS_3520", + "location": [ + [ + "NC_000913", + 3747084, + "+", + 1497 + ] + ], + "md5": "336d45e3e639496968ce46b8917ef2b9", + "parent_gene": "", + "protein_md5": "c48b8b9512cd6e0d8428e1a46bfbd151", + "protein_translation": "MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIRALLTHSGVSGEQIVGIGISAQGKGLFLLDKNDKPLGNAILSSDRRAMEIVRRWQEDGIPEKLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISESNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAALTGLKAGTPVVGGLFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEASPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQAIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPVRTLLPDMTAHQLYQKKYQRYQHLIAALQGFHARIKEHTL", + "protein_translation_length": 498, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011698" + ], + [ + "gene_synonym", + "ECK3570" + ], + [ + "gene_synonym", + "EcoGene:EG12285" + ], + [ + "gene_synonym", + "GI:16131452" + ], + [ + "gene_synonym", + "GeneID:948098" + ], + [ + "gene_synonym", + "JW3553" + ], + [ + "gene_synonym", + "NP_418038.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37678" + ], + [ + "gene_synonym", + "b3581" + ], + [ + "gene_synonym", + "sgbH" + ], + [ + "gene_synonym", + "yiaQ" + ] + ], + "dna_sequence": "ATGAGCCGACCACTTCTGCAACTGGCCCTCGACCACTCATCACTTGAAGCCGCGCAGCGCGACGTGACGCTGTTAAAAGACAGCGTCGATATCGTCGAAGCGGGCACCATTCTCTGTTTAAACGAAGGGCTTGGCGCGGTGAAAGCCTTGCGCGAACAGTGCCCGGACAAAATCATCGTTGCTGACTGGAAGGTCGCCGACGCTGGTGAAACGCTCGCGCAACAGGCGTTTGGCGCAGGCGCTAACTGGATGACCATCATCTGCGCCGCGCCGCTCGCGACGGTAGAAAAAGGCCACGCAATGGCACAACGCTGCGGGGGTGAAATTCAGATAGAGCTGTTCGGTAACTGGACGCTGGACGACGCCCGCGACTGGCATCGTATTGGCGTGCGGCAGGCCATTTATCATCGCGGTCGTGATGCACAGGCCAGCGGGCAACAGTGGGGCGAAGCCGATCTGGCACGCATGAAGGCGCTTTCAGATATCGGCCTTGAGCTTTCCATTACTGGCGGGATTACCCCTGCTGACCTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAA", + "dna_sequence_length": 663, + "functions": [ + "3-keto-L-gulonate 6-phosphate decarboxylase" + ], + "id": "CDS_3521", + "location": [ + [ + "NC_000913", + 3748577, + "+", + 663 + ] + ], + "md5": "066187abf791e3f002b9f17b7fbae4f3", + "parent_gene": "", + "protein_md5": "72dd56e2135778c01fe4d8bf7d090575", + "protein_translation": "MSRPLLQLALDHSSLEAAQRDVTLLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGAANPAQVAGDFHAQIDAIWGGARA", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011700" + ], + [ + "gene_synonym", + "ECK3571" + ], + [ + "gene_synonym", + "EcoGene:EG12286" + ], + [ + "gene_synonym", + "GI:90111618" + ], + [ + "gene_synonym", + "GeneID:948100" + ], + [ + "gene_synonym", + "JW5650" + ], + [ + "gene_synonym", + "NP_418039.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37679" + ], + [ + "gene_synonym", + "b3582" + ], + [ + "gene_synonym", + "sgbU" + ], + [ + "gene_synonym", + "yiaR" + ] + ], + "dna_sequence": "GTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCAGTCGAACAGGCGGCGGCATCACAAGTAATGCTGGCGGTGGAGATTATGGATACCGCGTTTATGAACTCCATCAGCAAATGGAAAAAATGGGACGAGATGCTCGCCTCACCGTGGTTCACCGTCTACCCGGACGTCGGCAACCTCAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGAGATTATTCAGGCGCGGCGTTGGATTGAAGCGCGTATGCAGGAGGCTGGATTTATATGTTAG", + "dna_sequence_length": 861, + "functions": [ + "putative L-xylulose 5-phosphate 3-epimerase" + ], + "id": "CDS_3522", + "location": [ + [ + "NC_000913", + 3749232, + "+", + 861 + ] + ], + "md5": "931588070e60a169ddc784c5dbcaefe6", + "parent_gene": "", + "protein_md5": "1964d352085c4e5813b05f1c3c40e387", + "protein_translation": "MRNHQLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGCVDFVGIFKTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011702" + ], + [ + "gene_synonym", + "ECK3572" + ], + [ + "gene_synonym", + "EcoGene:EG12287" + ], + [ + "gene_synonym", + "GI:16131454" + ], + [ + "gene_synonym", + "GeneID:948099" + ], + [ + "gene_synonym", + "JW3555" + ], + [ + "gene_synonym", + "NP_418040.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37680" + ], + [ + "gene_synonym", + "b3583" + ], + [ + "gene_synonym", + "sgbE" + ], + [ + "gene_synonym", + "yiaS" + ] + ], + "dna_sequence": "ATGTTAGAGCAACTGAAAGCCGACGTGCTGGCGGCGAATCTGGCGCTTCCCGCTCACCATCTGGTGACGTTCACCTGGGGCAATGTCAGCGCGGTAGACGAAACGCGGCAATGGATGGTAATCAAACCTTCCGGCGTCGAGTACGACGTGATGACCGCCGACGATATGGTGGTGGTTGAGATAGCCAGCGGTAAGGTGGTGGAAGGCAGCAAAAAACCCTCTTCCGATACACCAACGCATCTGGCGCTCTACCGTCGCTATGCCGAAATTGGCGGTATTGTGCATACCCACTCGCGCCACGCCACCATCTGGTCACAGGCCGGGCTGGATCTCCCCGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCTCACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAA", + "dna_sequence_length": 696, + "functions": [ + "L-ribulose-5-phosphate 4-epimerase" + ], + "id": "CDS_3523", + "location": [ + [ + "NC_000913", + 3750086, + "+", + 696 + ] + ], + "md5": "d7ca35c01cb5384601780326e0222500", + "parent_gene": "", + "protein_md5": "b5032ec5df07d240b23ec00a06d7d92f", + "protein_translation": "MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQWMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4459" + ], + [ + "gene_synonym", + "EcoGene:EG14455" + ], + [ + "gene_synonym", + "GeneID:5625574" + ], + [ + "gene_synonym", + "b4648" + ], + [ + "gene_synonym", + "ysaC" + ] + ], + "dna_sequence": "TTTAATGACGTTGGCTATTTCCGGCAGATTTTTCAGAAACATACTGGTTTAACGCCAGCAGCGTGGAAGCGGCGTTACAGCAAGGAACATATCAATTCGTAG", + "dna_sequence_length": 102, + "id": "CDS_3524", + "location": [ + [ + "NC_000913", + 3750914, + "-", + 102 + ] + ], + "md5": "273631981ae5f42d51a3648087f4230b", + "parent_gene": "", + "protein_md5": "d162917896972fa1b1b9127b68113a89", + "protein_translation": "FNDVGYFRQIFQKHTGLTPAAWKRRYSKEHINS", + "protein_translation_length": 33, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4460" + ], + [ + "gene_synonym", + "EcoGene:EG14456" + ], + [ + "gene_synonym", + "GeneID:5625575" + ], + [ + "gene_synonym", + "b4649" + ], + [ + "gene_synonym", + "ysaD" + ] + ], + "dna_sequence": "TATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGTTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCA", + "dna_sequence_length": 192, + "id": "CDS_3525", + "location": [ + [ + "NC_000913", + 3750918, + "+", + 192 + ] + ], + "md5": "2e0209278bdd0f7e98a59f807d630b72", + "parent_gene": "", + "protein_md5": "1488a64af633bd035cc2a2b56e1c8a16", + "protein_translation": "YCMEQADNVESLHNLLLPADAPFTTFEGKGLFSHKILIQTPGSRYEQSNPEQQPLWHYDGAPAA", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011704" + ], + [ + "gene_synonym", + "ECK3573" + ], + [ + "gene_synonym", + "EcoGene:EG12288" + ], + [ + "gene_synonym", + "GI:16131455" + ], + [ + "gene_synonym", + "GeneID:948097" + ], + [ + "gene_synonym", + "JW3556" + ], + [ + "gene_synonym", + "NP_418041.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37681" + ], + [ + "gene_synonym", + "b3584" + ], + [ + "gene_synonym", + "yiaT" + ] + ], + "dna_sequence": "ATGTTAATTAATCGCAATATTGTGGCGTTATTTGCGTTGCCTTTTATGGCAAGCGCAACTGCTTCTGAATTATCCATTGGTGCTGGTGCGGCTTATAATGAATCGCCTTATCGCGGTTATAATGAAAATACGAAGGCAATTCCGCTGATTAGTTATGAAGGTGATACTTTTTATGTTCGTCAGACCACGTTAGGTTTTATTCTGTCGCAAAGTGAAAAAAATGAACTTAGCCTGACCGCATCCTGGATGCCGCTGGAATTTGACCCTACCGATAATGACGATTATGCCATGCAACAGCTTGATAAGCGTGATAGTACGGCTATGGCGGGGGTTGCCTGGTATCACCACGAGCGTTGGGGAACCGTGAAAGCCTCTGCAGCTGCGGACGTTCTGGATAACAGCAACGGCTGGGTGGGGGAGCTATCGGTATTCCACAAAATGCAGATAGGTCGTCTGTCGCTGACACCTGCGCTGGGCGTTCTCTATTATGACGAGAATTTCAGTGACTATTACTATGGCATTTCAGAGAGTGAGTCCCGTCGTAGCGGTCTGGCAAGTTATTCCGCGCAGGATGCCTGGGTGCCCTATGTCAGCCTGACGGCAAAATACCCGATAGGAGAGCACGTCGTATTGATGGCGAGCGCAGGATACAGCGAGCTGCCGGAAGAGATTACCGACAGCCCGATGATTGATCGTAATGAGAGTTTTACCTTTGTCACCGGGGTGAGCTGGCGTTTTTAA", + "dna_sequence_length": 741, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_3526", + "location": [ + [ + "NC_000913", + 3751868, + "-", + 741 + ] + ], + "md5": "560611f2e857c42a4dba6fcc31dfe68d", + "parent_gene": "", + "protein_md5": "dc4bad519aca1386f55dcc159cc9739f", + "protein_translation": "MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011710" + ], + [ + "gene_synonym", + "ECK3574" + ], + [ + "gene_synonym", + "EcoGene:EG12289" + ], + [ + "gene_synonym", + "GI:16131456" + ], + [ + "gene_synonym", + "GeneID:948107" + ], + [ + "gene_synonym", + "JW3557" + ], + [ + "gene_synonym", + "NP_418042.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37682" + ], + [ + "gene_synonym", + "b3585" + ], + [ + "gene_synonym", + "yiaU" + ] + ], + "dna_sequence": "ATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGTACATCAACGACATGCTGGACAGAAACGAGCAACTTAATAATTTTATTGCAGATTATAAGCATGAGAAACGTGGTCGGGTCACCATCTACGCCCCAACCGGCATAATTACCTATTTATCCAAACATGTAATCGATAAAATTAAAGATATCGGTGATATCACCTTATCGCTAAAAACCTGCAATCTTGAGCGTAATGCCTTTTATGAAGGCGTCGAATTTCCTGATGATTGTGATGTTTTAATCAGCTACGCTCCACCAAAAGATGAATCGCTGGTTGCCAGTTTTATTACCCAATATGCCGTAACCGCTTATGCCAGCCAGCGCTATCTTGAGAAACATCCCATTAGCCGTCCTGACGAACTCGAACATCACTCCTGTATTTTGATCGACTCGATGATGATCGACGACGCGAATATCTGGCGCTTCAACGTCGCCGGGAGTAAAGAGGTGCGGGATTATCGCGTGAAGGGAAATTACGTTTGCGACAACACGCAATCTGCGCTGGAGCTGGCACGAAATCACCTGGGGATTGTGTTTGCGCCAGACAAAAGTGTGCAGAGCGACCTGCAAGACGGCACGCTGGTGCCCTGCTTTCAGCAACCCTATGAATGGTGGCTGGATCTGGTGGCTATCTTCCGTAAACGGGAATACCAGCCCTGGCGGGTCCAGTATGTGCTGGATGAAATGCTGCGTGAAATTCGCCACCAGCTTGCTCAGTCGCAGCAACTGCGGCCTGAACAAGCGGCGGAAAGCGAAGATTAA", + "dna_sequence_length": 975, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3527", + "location": [ + [ + "NC_000913", + 3751992, + "+", + 975 + ] + ], + "md5": "f21160d04a5bd2c569c1858b37cf327c", + "parent_gene": "", + "protein_md5": "7da09c1ecc2f77674543180e545c8ff4", + "protein_translation": "MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADFESKVGLKVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYAPTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDESLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALELARNHLGIVFAPDKSVQSDLQDGTLVPCFQQPYEWWLDLVAIFRKREYQPWRVQYVLDEMLREIRHQLAQSQQLRPEQAAESED", + "protein_translation_length": 324, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011712" + ], + [ + "gene_synonym", + "ECK3575" + ], + [ + "gene_synonym", + "EcoGene:EG12290" + ], + [ + "gene_synonym", + "GI:16131457" + ], + [ + "gene_synonym", + "GeneID:948106" + ], + [ + "gene_synonym", + "JW3558" + ], + [ + "gene_synonym", + "NP_418043.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37683" + ], + [ + "gene_synonym", + "b3586" + ], + [ + "gene_synonym", + "yiaV" + ] + ], + "dna_sequence": "ATGGATTTACTGATTATTTTGACCTATGTGGCTTTTGCATGGGCAATGTTTAAGATCTTCAAAATTCCCGTAAATAAATGGACCATTCCCACAGCGGCCCTGGGTGGAATATTTATTGTCAGCGGTCTAATTCTGTTAATGAACTATAACCATCCGTATACCTTTAAAGCGCAAAAAGCGGTTATTTCTATTCCTGTTGTCCCACAGGTGACTGGTGTGGTGATTGAAGTGACGGATAAGAAAAATACGCTGATTAAAAAAGGTGAGGTGCTATTTCGACTGGACCCGACGCGTTATCAGGCGCGGGTGGATCGGCTGATGGCGGATATCGTTACCGCAGAACATAAACAGCGGGCGTTGGGCGCAGAGTTAGATGAGATGGCGGCGAATACTCAGCAGGCAAAGGCCACGCGGGATAAATTCGCTAAAGAGTATCAGCGTTACGCACGTGGCAGCCAGGCGAAAGTAAACCCGTTTTCAGAACGCGATATCGATGTGGCGCGGCAAAATTATCTGGCGCAGGAAGCCTCCGTGAAGTCATCGGCGGCGGAACAAAAACAGATCCAGAGCCAGCTGGATAGCCTGGTGTTGGGTGAACATTCTCAAATCGCCAGCCTGAAAGCACAGCTCGCGGAAGCAAAATATAACCTTGAGCAGACGATAGTGCGTGCGCCGAGCGATGGTTATGTGACCCAGGTACTGATTCGTCCGGGTACCTATGCCGCGTCGCTGCCGCTACGTCCGGTGATGGTGTTTATACCCGATCAGAAACGACAAATCGTGGCGCAGTTCCGTCAGAACTCCTTGCTGCGACTGGCTCCTGGCGACGATGCGGAAGTGGTGTTTAATGCTCTGCCAGGTAAGGTATTCAGCGGTAAGCTGGCAGCCATTAGTCCAGCCGTTCCCGGCGGAGCTTATCAGTCGACCGGCACCTTACAGACGTTAAACACAGCGCCGGGTTCAGATGGCGTTATCGCGACCATTGAACTGGATGAGCACACTGATTTGAGCGCTTTACCAGACGGTATTTACGCCCAGGTGGCGGTTTACTCTGATCATTTCAGCCATGTCTCGGTGATGCGCAAAGTGCTATTACGCATGACCAGCTGGGTGCATTACCTTTATCTCGATCATTAA", + "dna_sequence_length": 1137, + "functions": [ + "signal-anchored membrane fusion protein (MFP) component of efflux pump" + ], + "id": "CDS_3528", + "location": [ + [ + "NC_000913", + 3754099, + "-", + 1137 + ] + ], + "md5": "f784dc7292699f92754c9b6fcab060eb", + "parent_gene": "", + "protein_md5": "06d242fabfd455565ac4dab156f5d047", + "protein_translation": "MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTAALGGIFIVSGLILLMNYNHPYTFKAQKAVISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIRPGTYAASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGDDAEVVFNALPGKVFSGKLAAISPAVPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHTDLSALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWVHYLYLDH", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011714" + ], + [ + "gene_synonym", + "ECK3576" + ], + [ + "gene_synonym", + "EcoGene:EG12291" + ], + [ + "gene_synonym", + "GI:16131458" + ], + [ + "gene_synonym", + "GeneID:948105" + ], + [ + "gene_synonym", + "JW3559" + ], + [ + "gene_synonym", + "NP_418044.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADK4" + ], + [ + "gene_synonym", + "b3587" + ], + [ + "gene_synonym", + "yiaW" + ] + ], + "dna_sequence": "ATGTTCCTGGACTATTTTGCACTGGGAGTGCTTATTTTTGTATTTCTGGTGATCTTCTATGGGATCATTATTTTACATGATATTCCCTACCTGATTGCCAAAAAACGTAATCATCCTCATGCCGACGCCATTCATGTTGCTGGTTGGGTGAGTCTTTTTACGTTACATGTTATCTGGCCGTTTTTGTGGATTTGGGCCACGCTTTACCGCCCGGAGCGGGGATGGGGAATGCAAAGCCATGATTCATCCGTTATGCAACTGCAACAGCGCATTGCCGGGCTGGAGAAACAGCTCGCCGACATCAAATCCTCTTCTGCCGAGTAA", + "dna_sequence_length": 324, + "functions": [ + "DUF3302 family inner membrane protein" + ], + "id": "CDS_3529", + "location": [ + [ + "NC_000913", + 3754428, + "-", + 324 + ] + ], + "md5": "e15b69769fcb91a8f21f07aec0059960", + "parent_gene": "", + "protein_md5": "03a5722e1ec4e7ab4e3ea0042c06e0fa", + "protein_translation": "MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAIHVAGWVSLFTLHVIWPFLWIWATLYRPERGWGMQSHDSSVMQLQQRIAGLEKQLADIKSSSAE", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011718" + ], + [ + "gene_synonym", + "ECK3577" + ], + [ + "gene_synonym", + "EcoGene:EG12292" + ], + [ + "gene_synonym", + "GI:90111619" + ], + [ + "gene_synonym", + "GeneID:948104" + ], + [ + "gene_synonym", + "JW3561" + ], + [ + "gene_synonym", + "NP_418045.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37685" + ], + [ + "gene_synonym", + "aldB" + ], + [ + "gene_synonym", + "b3588" + ], + [ + "gene_synonym", + "yiaX" + ] + ], + "dna_sequence": "ATGACCAATAATCCCCCTTCAGCACAGATTAAGCCCGGCGAGTATGGTTTCCCCCTCAAGTTAAAAGCCCGCTATGACAACTTTATTGGCGGCGAATGGGTAGCCCCTGCCGACGGCGAGTATTACCAGAATCTGACGCCGGTGACCGGGCAGCTGCTGTGCGAAGTGGCGTCTTCGGGCAAACGAGACATCGATCTGGCGCTGGATGCTGCGCACAAAGTGAAAGATAAATGGGCGCACACCTCGGTGCAGGATCGTGCGGCGATTCTGTTTAAGATTGCCGATCGAATGGAACAAAACCTCGAGCTGTTAGCGACAGCTGAAACCTGGGATAACGGCAAACCCATTCGCGAAACCAGTGCTGCGGATGTACCGCTGGCGATTGACCATTTCCGCTATTTCGCCTCGTGTATTCGGGCGCAGGAAGGTGGGATCAGTGAAGTTGATAGCGAAACCGTGGCCTATCATTTCCATGAACCGTTAGGCGTGGTGGGGCAGATTATCCCGTGGAACTTCCCGCTGCTGATGGCGAGCTGGAAAATGGCTCCCGCGCTGGCGGCGGGCAACTGTGTGGTGCTGAAACCCGCACGTCTTACCCCGCTTTCTGTACTGCTGCTAATGGAAATTGTCGGTGATTTACTGCCGCCGGGCGTGGTGAACGTGGTCAATGGCGCAGGTGGGGTAATTGGCGAATATCTGGCGACCTCGAAACGCATCGCCAAAGTGGCGTTTACCGGCTCAACGGAAGTGGGCCAACAAATTATGCAATACGCAACGCAAAACATTATTCCGGTGACGCTGGAGTTGGGCGGTAAGTCGCCAAATATCTTCTTTGCTGATGTGATGGATGAAGAAGATGCCTTTTTCGATAAAGCGCTGGAAGGCTTTGCACTGTTTGCCTTTAACCAGGGCGAAGTTTGCACCTGTCCGAGTCGTGCTTTAGTGCAGGAATCTATCTACGAACGCTTTATGGAACGCGCCATCCGCCGTGTCGAAAGCATTCGTAGCGGTAACCCGCTCGACAGCGTGACGCAAATGGGCGCGCAGGTTTCTCACGGGCAACTGGAAACCATCCTCAACTACATTGATATCGGTAAAAAAGAGGGCGCTGACGTGCTCACAGGCGGGCGGCGCAAGCTGCTGGAAGGTGAACTGAAAGACGGCTACTACCTCGAACCGACGATTCTGTTTGGTCAGAACAATATGCGGGTGTTCCAGGAGGAGATTTTTGGCCCGGTGCTGGCGGTGACCACCTTCAAAACGATGGAAGAAGCGCTGGAGCTGGCGAACGATACGCAATATGGCCTGGGCGCGGGCGTCTGGAGCCGCAACGGTAATCTGGCCTATAAGATGGGGCGCGGCATACAGGCTGGGCGCGTGTGGACCAACTGTTATCACGCTTACCCGGCACATGCGGCGTTTGGTGGCTACAAACAATCAGGTATCGGTCGCGAAACCCACAAGATGATGCTGGAGCATTACCAGCAAACCAAGTGCCTGCTGGTGAGCTACTCGGATAAACCGTTGGGGCTGTTCTGA", + "dna_sequence_length": 1539, + "functions": [ + "aldehyde dehydrogenase B" + ], + "id": "CDS_3530", + "location": [ + [ + "NC_000913", + 3756511, + "-", + 1539 + ] + ], + "md5": "6fe5ecfb71e6cad5a428c90ac7933080", + "parent_gene": "", + "protein_md5": "f322a8aeec9a39529737150d950df3d6", + "protein_translation": "MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011725" + ], + [ + "gene_synonym", + "ECK3578" + ], + [ + "gene_synonym", + "EcoGene:EG12293" + ], + [ + "gene_synonym", + "GI:49176377" + ], + [ + "gene_synonym", + "GeneID:948102" + ], + [ + "gene_synonym", + "JW5648" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37686" + ], + [ + "gene_synonym", + "YP_026233.1" + ], + [ + "gene_synonym", + "b3589" + ], + [ + "gene_synonym", + "yiaY" + ] + ], + "dna_sequence": "ATGGCAGCTTCAACGTTCTTTATTCCTTCTGTGAATGTCATCGGCGCTGATTCATTGACTGATGCAATGAATATGATGGCAGATTATGGATTTACCCGTACCTTAATTGTCACTGACAATATGTTAACGAAATTAGGTATGGCGGGCGATGTGCAAAAAGCACTGGAAGAACGCAATATTTTTAGCGTTATTTATGATGGCACCCAACCTAACCCCACCACGGAAAACGTCGCCGCAGGTTTGAAATTACTTAAAGAGAATAATTGCGATAGCGTGATCTCCTTAGGCGGTGGTTCTCCACACGACTGCGCAAAAGGTATTGCGCTGGTGGCAGCCAATGGCGGCGATATTCGCGATTACGAAGGCGTTGACCGCTCTGCAAAACCGCAGCTGCCGATGATCGCCATCAATACCACGGCGGGTACGGCCTCTGAAATGACCCGTTTCTGCATCATCACTGACGAAGCGCGTCATATCAAAATGGCGATTGTTGATAAACATGTCACTCCGCTGCTTTCTGTCAATGACTCCTCTCTGATGATTGGTATGCCGAAGTCACTGACCGCCGCAACGGGTATGGATGCCTTAACGCACGCTATCGAAGCATATGTTTCTATTGCCGCCACGCCGATCACTGACGCTTGTGCACTGAAAGCCGTGACCATGATTGCCGAAAACCTGCCGTTAGCCGTTGAAGATGGCAGTAATGCGAAAGCGCGTGAAGCAATGGCTTATGCCCAGTTCCTCGCCGGTATGGCGTTCAATAATGCTTCTCTGGGTTATGTTCATGCGATGGCGCACCAGCTGGGCGGTTTCTACAACCTGCCACACGGTGTATGTAACGCCGTTTTGCTGCCGCACGTTCAGGTATTCAACAGCAAAGTCGCCGCTGCACGTCTGCGTGACTGTGCCGCTGCAATGGGCGTGAACGTGACAGGTAAAAACGACGCGGAAGGTGCTGAAGCCTGCATTAACGCCATCCGTGAACTGGCGAAGAAAGTGGATATCCCGGCAGGCCTACGCGACCTGAACGTGAAAGAAGAAGATTTCGCGGTATTGGCGACTAATGCCCTGAAAGATGCCTGTGGCTTTACTAACCCGATCCAGGCAACTCACGAAGAAATTGTGGCGATTTATCGCGCAGCGATGTAA", + "dna_sequence_length": 1152, + "functions": [ + "L-threonine dehydrogenase" + ], + "id": "CDS_3531", + "location": [ + [ + "NC_000913", + 3757827, + "-", + 1152 + ] + ], + "md5": "8c53bf23b04260e1682b5222a028c0e9", + "parent_gene": "", + "protein_md5": "c5954c33b06d050367dfd04212fa7006", + "protein_translation": "MAASTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKMAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011729" + ], + [ + "gene_synonym", + "ECK3579" + ], + [ + "gene_synonym", + "EcoGene:EG10942" + ], + [ + "gene_synonym", + "GI:16131461" + ], + [ + "gene_synonym", + "GeneID:948103" + ], + [ + "gene_synonym", + "JW3563" + ], + [ + "gene_synonym", + "NP_418047.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14081" + ], + [ + "gene_synonym", + "b3590" + ], + [ + "gene_synonym", + "fdhA" + ], + [ + "gene_synonym", + "selB" + ] + ], + "dna_sequence": "ATGATTATTGCGACTGCCGGACACGTTGACCACGGCAAAACAACCTTATTGCAGGCGATTACTGGCGTAAATGCTGACCGTCTGCCGGAAGAAAAAAAGCGCGGCATGACCATCGATCTCGGCTATGCCTACTGGCCGCAGCCGGATGGTCGCGTGCCTGGTTTTATCGACGTTCCCGGTCATGAAAAGTTTCTTTCCAACATGCTGGCGGGCGTTGGTGGTATCGATCACGCGCTGTTGGTGGTGGCGTGCGATGACGGCGTGATGGCACAGACCCGTGAGCATCTGGCGATTTTGCAGCTGACCGGTAACCCGATGCTGACAGTGGCGCTGACCAAAGCCGATCGCGTGGACGAAGCGCGTGTTGATGAGGTTGAACGCCAGGTAAAGGAGGTTCTGCGGGAATACGGTTTTGCTGAGGCAAAACTGTTTATCACCGCAGCAACCGAAGGTCGGGGAATGGATGCCCTGCGCGAGCATCTGCTTCAGTTGCCGGAACGCGAGCACGCCAGCCAACATAGTTTCCGCCTCGCGATTGACCGCGCATTTACCGTAAAAGGTGCCGGGCTGGTCGTCACCGGTACGGCGTTAAGCGGGGAAGTGAAGGTAGGCGATTCACTCTGGCTGACTGGTGTAAATAAACCGATGCGTGTACGTGCGCTGCATGCGCAAAACCAGCCAACAGAAACCGCCAATGCCGGGCAGCGTATCGCGCTTAACATCGCGGGTGATGCGGAAAAAGAGCAGATTAACCGTGGCGACTGGCTGCTTGCCGATGTGCCGCCAGAGCCGTTCACACGGGTGATTGTCGAGCTTCAAACCCATACACCGCTGACCCAGTGGCAGCCGCTGCATATTCACCACGCCGCCAGCCACGTCACGGGACGCGTTTCACTGCTGGAAGATAACCTTGCTGAACTGGTCTTCGACACCCCGTTATGGCTGGCAGATAACGACCGCCTGGTATTGCGCGATATCTCTGCCCGCAACACGCTGGCCGGAGCGCGCGTCGTGATGCTTAACCCGCCGCGTCGCGGTAAACGTAAGCCGGAATATCTGCAATGGCTGGCGTCTCTTGCACGGGCGCAGAGCGATGCCGATGCGTTATCTGTTCATCTGGAACGCGGCGCGGTTAACCTTGCGGATTTCGCCTGGGCGCGCCAGCTCAACGGCGAAGGGATGCGCGAATTGCTGCAACAGCCTGGTTATATTCAGGCTGGTTATAGCTTGTTGAATGCGCCGGTTGCCGCCCGCTGGCAGCGGAAAATTCTCGACACATTAGCGACTTATCATGAGCAACATCGCGATGAACCTGGCCCTGGGCGCGAACGTCTGCGACGTATGGCGTTGCCAATGGAAGATGAAGCGCTGGTACTGTTGCTGATTGAAAAGATGCGCGAAAGCGGCGACATCCACAGCCATCACGGCTGGCTGCATCTGCCAGATCACAAAGCGGGCTTCAGCGAAGAGCAGCAGGCCATCTGGCAAAAAGCAGAGCCACTGTTTGGTGACGAACCGTGGTGGGTGCGTGACCTGGCAAAAGAGACGGGAACCGACGAGCAGGCAATGCGCCTGACTCTACGCCAGGCGGCGCAGCAAGGAATAATTACCGCGATCGTTAAAGATCGTTATTACCGTAACGATCGGATTGTCGAGTTTGCCAATATGATCCGCGATCTCGATCAGGAGTGTGGTTCAACCTGCGCGGCGGATTTCCGCGATCGCTTAGGCGTAGGCCGAAAGCTGGCAATTCAGATTCTGGAATATTTTGACCGCATTGGCTTTACGCGTCGTCGTGGAAATGATCATTTATTGCGCGACGCATTATTATTTCCGGAAAAATAA", + "dna_sequence_length": 1845, + "functions": [ + "selenocysteinyl-tRNA-specific translation factor" + ], + "id": "CDS_3532", + "location": [ + [ + "NC_000913", + 3759861, + "-", + 1845 + ] + ], + "md5": "8143b04930561228cdce017983b19bd8", + "parent_gene": "", + "protein_md5": "4b2fc7c4ace87fe8f692990849e0bbe4", + "protein_translation": "MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK", + "protein_translation_length": 614, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011731" + ], + [ + "gene_synonym", + "ECK3580" + ], + [ + "gene_synonym", + "EcoGene:EG10941" + ], + [ + "gene_synonym", + "GI:16131462" + ], + [ + "gene_synonym", + "GeneID:948124" + ], + [ + "gene_synonym", + "JW3564" + ], + [ + "gene_synonym", + "NP_418048.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A821" + ], + [ + "gene_synonym", + "b3591" + ], + [ + "gene_synonym", + "fdhA" + ], + [ + "gene_synonym", + "selA" + ] + ], + "dna_sequence": "ATGACAACCGAAACGCGTTCCCTCTATAGTCAACTTCCGGCTATTGATCGCTTATTGCGCGATAGCTCCTTCCTTTCTTTGCGTGATACTTATGGTCACACCCGCGTGGTGGAATTGTTGCGTCAGATGCTCGACGAAGCGCGAGAAGTGATTCGTGGCAGCCAGACGCTGCCTGCGTGGTGTGAAAACTGGGCGCAAGAAGTCGATGCCCGGTTGACGAAAGAAGCGCAGAGCGCGCTGCGTCCGGTGATCAACCTGACGGGAACCGTGCTGCATACCAACCTTGGGCGAGCTTTACAGGCGGAAGCCGCGGTGGAAGCCGTTGCGCAGGCTATGCGTTCGCCAGTGACCCTCGAGTATGATCTGGACGACGCCGGACGCGGACATCGCGATCGGGCGCTGGCGCAGCTGCTGTGCCGTATTACGGGGGCGGAAGATGCCTGTATCGTCAATAACAATGCGGCGGCGGTGTTATTGATGTTGGCGGCCACTGCCAGCGGAAAAGAGGTGGTGGTATCTCGCGGCGAACTGGTGGAGATTGGCGGCGCGTTTCGTATTCCCGATGTTATGCGTCAGGCAGGCTGCACCCTACACGAAGTAGGGACCACCAACCGCACGCACGCGAATGATTATCGTCAGGCGGTGAATGAAAATACCGCACTGTTGATGAAAGTACATACCAGTAACTACAGCATTCAGGGGTTCACCAAAGCGATAGATGAAGCGGAACTGGTGGCGCTCGGCAAAGAGCTGGATGTTCCCGTAGTGACTGATTTAGGCAGTGGCTCGCTGGTCGATCTTAGCCAGTACGGTTTGCCGAAAGAGCCAATGCCGCAGGAGTTGATTGCGGCGGGCGTCAGTCTGGTGAGTTTCTCCGGCGACAAGTTGTTAGGCGGGCCGCAGGCAGGAATTATTGTTGGTAAAAAAGAGATGATCGCCCGCCTGCAAAGCCACCCGCTGAAGCGTGCATTACGCGCGGATAAAATGACCCTCGCGGCGCTGGAAGCCACGTTGCGTCTTTATTTACACCCTGAAGCTCTGAGTGAAAAATTACCGACCCTGCGCCTGCTTACCCGCAGCGCAGAGGTCATTCAAATCCAGGCACAACGTTTACAGGCCCCCCTTGCCGCACATTACGGCGCGGAGTTTGCGGTACAGGTTATGCCATGTCTTTCGCAGATTGGCAGTGGTTCGCTGCCGGTTGATCGCCTGCCGAGCGCGGCATTAACGTTTACACCCCATGATGGACGCGGTAGCCACCTTGAGTCATTAGCCGCCCGCTGGCGTGAATTGCCAGTGCCGGTGATTGGTCGTATTTATGACGGACGATTGTGGCTGGATTTACGCTGCCTTGAAGATGAGCAACGGTTTTTGGAGATGTTGTTGAAATGA", + "dna_sequence_length": 1392, + "functions": [ + "selenocysteine synthase" + ], + "id": "CDS_3533", + "location": [ + [ + "NC_000913", + 3761249, + "-", + 1392 + ] + ], + "md5": "48a25442b99d7019836fa02b86c6084d", + "parent_gene": "", + "protein_md5": "46878df06908678544228c509871d19f", + "protein_translation": "MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK", + "protein_translation_length": 463, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011736" + ], + [ + "gene_synonym", + "ECK3581" + ], + [ + "gene_synonym", + "EcoGene:EG11762" + ], + [ + "gene_synonym", + "GI:16131463" + ], + [ + "gene_synonym", + "GeneID:948113" + ], + [ + "gene_synonym", + "JW3565" + ], + [ + "gene_synonym", + "NP_418049.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACA1" + ], + [ + "gene_synonym", + "b3592" + ], + [ + "gene_synonym", + "yibF" + ] + ], + "dna_sequence": "ATGAAACTCGTCGGTAGCTACACCAGCCCGTTTGTACGCAAACTTTCTATTCTGTTGTTAGAAAAGGGCATAACTTTCGAATTTATTAATGAACTGCCCTATAACGCGGACAACGGCGTGGCGCAATTTAACCCGTTAGGAAAAGTGCCGGTGCTGGTGACCGAAGAGGGCGAATGCTGGTTTGATTCGCCGATCATCGCTGAATATATTGAATTAATGAATGTCGCTCCGGCGATGTTGCCGCGCGATCCGCTGGAGTCGTTGCGGGTGCGCAAAATTGAGGCACTGGCGGATGGCATTATGGATGCCGGGCTGGTATCGGTGCGTGAACAGGCGCGTCCAGCGGCGCAGCAGTCTGAAGATGAATTGTTACGCCAGCGGGAGAAAATCAACCGCAGTCTGGATGTGCTGGAAGGATATCTGGTCGATGGCACACTCAAAACCGATACGGTCAATCTGGCGACTATCGCCATTGCCTGTGCCGTCGGATATCTCAATTTCCGCCGCGTTGCGCCAGGTTGGTGTGTCGACCGCCCACACTTAGTCAAACTGGTCGAAAACCTGTTTAGCCGCGAAAGTTTTGCTCGCACCGAACCGCCAAAGGCTTGA", + "dna_sequence_length": 609, + "functions": [ + "glutathione S-transferase homolog" + ], + "id": "CDS_3534", + "location": [ + [ + "NC_000913", + 3761955, + "-", + 609 + ] + ], + "md5": "92ac3e61822c340a23fec01503510701", + "parent_gene": "", + "protein_md5": "bdf43d94844e8e1113c69c49f67c0e25", + "protein_translation": "MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA", + "protein_translation_length": 202, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011742" + ], + [ + "gene_synonym", + "ECK3582" + ], + [ + "gene_synonym", + "EcoGene:EG10846" + ], + [ + "gene_synonym", + "GI:16131464" + ], + [ + "gene_synonym", + "GeneID:948120" + ], + [ + "gene_synonym", + "JW3566" + ], + [ + "gene_synonym", + "NP_418050.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16916" + ], + [ + "gene_synonym", + "b3593" + ], + [ + "gene_synonym", + "rhsA" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTAACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATTGTGGTGATATTAGTGCTAAAGATGCAAAAAGCACACAGAAAGCCTGGAATTGTCGTCACTCCAGACAGTCAAACGATAAAAAAAGATAG", + "dna_sequence_length": 4134, + "functions": [ + "Rhs protein with putative toxin 55 domain", + "putative polysaccharide synthesis/export protein", + "putative neighboring cell growth inhibitor" + ], + "id": "CDS_3535", + "location": [ + [ + "NC_000913", + 3762183, + "+", + 4134 + ] + ], + "md5": "a84b7ee47ac8c45d3bfb6ed88e5f960b", + "parent_gene": "", + "protein_md5": "3b8768179878175baeb9ee0184e024b6", + "protein_translation": "MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISKEGTTEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVTNTDPLGLEVFPRPFPLPIPWPKSPAQQQADDNAAKALTKWWNDTASQRIFDSLILNNPGLALDITMIASRGNVADTGITDRVNDIINDRFWSDGKKPDRCDVLQELIDCGDISAKDAKSTQKAWNCRHSRQSNDKKR", + "protein_translation_length": 1377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011744" + ], + [ + "gene_synonym", + "ECK3583" + ], + [ + "gene_synonym", + "EcoGene:EG11187" + ], + [ + "gene_synonym", + "GI:16131465" + ], + [ + "gene_synonym", + "GeneID:948108" + ], + [ + "gene_synonym", + "JW3568" + ], + [ + "gene_synonym", + "NP_418051.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADK6" + ], + [ + "gene_synonym", + "b3594" + ], + [ + "gene_synonym", + "yibA" + ] + ], + "dna_sequence": "ATGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATCAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCACAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGTGGGCAAGACGCTGTTAGATTGGCAATTGAGTTCTGCTCTGATAAAAATTATATCCGTAGAGATATCGGAGCATTTATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTTTTGATAAATCGACTAATGTCAGACGTGCTACAGCATTTGCTATTTCTGTTATCAATGATAAAGCAACAATTCCACTATTGATTAATCTGTTAAAAGATCCAAATGGAGATGTCAGAAACTGGGCCGCATTTGCAATAAATATCAATAAATATGATAATAGTGATATTAGGGATTGTTTTGTGGAGATGCTTCAGGATAAAAATGAGGAAGTCCGTATTGAAGCAATAATCGGACTTTCCTACAGAAAAGATAAAAGGGTTTTATCTGTTTTATGCGATGAGTTAAAAAAAAATACTGTTTATGATGATATCATTGAAGCTGCGGGTGAATTAGGTGATAAAACGCTACTTCCTGTTTTAGATACTATGTTGTACAAGTTTGATGACAATGAAATTATAACTTCCGCTATTGATAAGCTGAAGCGTTCATAG", + "dna_sequence_length": 843, + "functions": [ + "putative immunity protein for polymorphic toxin RhsA", + "HEAT-domain protein", + "lethality reduction protein" + ], + "id": "CDS_3536", + "location": [ + [ + "NC_000913", + 3766337, + "+", + 843 + ] + ], + "md5": "c6e61b277393c7908e3c9b126e0d208e", + "parent_gene": "", + "protein_md5": "d18afbf78dee68b5e81f6540cfe98193", + "protein_translation": "MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011746" + ], + [ + "gene_synonym", + "ECK3584" + ], + [ + "gene_synonym", + "EcoGene:EG11766" + ], + [ + "gene_synonym", + "GeneID:948112" + ], + [ + "gene_synonym", + "JW5647" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32109" + ], + [ + "gene_synonym", + "b3595" + ], + [ + "gene_synonym", + "rhsJ" + ], + [ + "gene_synonym", + "yibJ" + ] + ], + "dna_sequence": "GTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAAAGTGATCTTATCCATTCTGTAGCTGATGAGATTAATATCCCAGGCGTTTTCACAATCGGGGGGCATGGTACCCCCACATCTATTGAATCCGCAACGCGCAGTATCATGACAGCTAAAGATCTAGCATATCTAATTAAATTTGATGGGAATTATAAAGATGGGATGACAGTTTGGTTATTTTCTTGTAATACAGGTAAAGGACAAAATTCATTTGCTAGCTAATTAGCTAAAGAGTTACATACAAATGTAATAGGACCTGACACGCTATGGACGTGGTGGGGGCGAGGAACTAATGGTAAGTTAAAAATGGATACAGTGCTAACAGCACCAACGAACCTTAATTCAAATAAGGATCTAATGGCTATAACAACAAAAGACCTTGGTAATTGGATAACATATGGGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGATATAAGATAG", + "dna_sequence_length": 945, + "id": "CDS_3537", + "location": [ + [ + "NC_000913", + 3767221, + "+", + 945 + ] + ], + "md5": "205b98c071c2317744aba7fbebe7887a", + "parent_gene": "", + "protein_md5": "e8b865487f9e172870c79a95e7b4dce5", + "protein_translation": "VQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011750" + ], + [ + "gene_synonym", + "ECK3585" + ], + [ + "gene_synonym", + "EcoGene:EG11763" + ], + [ + "gene_synonym", + "GI:16131467" + ], + [ + "gene_synonym", + "GeneID:948111" + ], + [ + "gene_synonym", + "JW3570" + ], + [ + "gene_synonym", + "NP_418053.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32106" + ], + [ + "gene_synonym", + "b3596" + ], + [ + "gene_synonym", + "yibG" + ] + ], + "dna_sequence": "ATGAAAGCATGCTTGTTACTATTTTTTTATTTCTCTTTTATTTGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATTATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATGCAAAGAGCAAACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA", + "dna_sequence_length": 462, + "functions": [ + "TPR-like repeat protein" + ], + "id": "CDS_3538", + "location": [ + [ + "NC_000913", + 3768177, + "+", + 462 + ] + ], + "md5": "35dc9d1812b29c35ee8584dc436b5778", + "parent_gene": "", + "protein_md5": "30109b9477ccfa4741d9b7bd0fac24bd", + "protein_translation": "MKACLLLFFYFSFICQLHGADVKIKQNESMMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIYKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4440" + ], + [ + "gene_synonym", + "EcoGene:EG14348" + ], + [ + "gene_synonym", + "GeneID:5625576" + ], + [ + "gene_synonym", + "b4650" + ], + [ + "gene_synonym", + "yibS" + ] + ], + "dna_sequence": "AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTAACCGCAGCAGGGGCGGTATAACACTCAGGCTCCGATTGGGCTGGAAGGTAGGTGGAATTTTTATCAGTATCCGTTGAACCCGATTTCTGGAATCGATCCCCTTGGGATTAGCCACCTGTTTATACAGCATAACTTTAGGTATGCTTTCGTGTGTTTCAGATATACCATGTGA", + "dna_sequence_length": 252, + "id": "CDS_3539", + "location": [ + [ + "NC_000913", + 3768639, + "+", + 252 + ] + ], + "md5": "2cb15ea58b376dd04db37c3648c06771", + "parent_gene": "", + "protein_md5": "e7d06e530ab8792d58c0ebef4e0b36a4", + "protein_translation": "KQ", + "protein_translation_length": 2, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4450" + ], + [ + "gene_synonym", + "EcoGene:EG14439" + ], + [ + "gene_synonym", + "GeneID:5625577" + ], + [ + "gene_synonym", + "b4651" + ], + [ + "gene_synonym", + "yibW" + ] + ], + "dna_sequence": "GATAATTTTTATGATGTGCTTAGTATTCCAGTCGCTTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTAATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCAGAGCCAGATAGCACATTAACAGTTACGGACTAA", + "dna_sequence_length": 366, + "id": "CDS_3540", + "location": [ + [ + "NC_000913", + 3768892, + "+", + 84 + ], + [ + "NC_000913", + 3768975, + "+", + 282 + ] + ], + "md5": "b30524cea59e1f9a3a393571ea71c6de", + "parent_gene": "", + "protein_md5": "5194423c7420509391cd7c8759e7eca2", + "protein_translation": "DNFYDVLSIPVASGNNMQCKNNPRCTHLINRWPIPQGLWSWNVNDPGASNRKPDGIRLVPSVNTGTYNRNGFSIHSCLNAFGPSLGPRFCSEGCITGLSNDMQKLNELIFSEPDSTLTVTD", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4424" + ], + [ + "gene_synonym", + "EcoGene:EG14438" + ], + [ + "gene_synonym", + "GeneID:5061524" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A625" + ], + [ + "gene_synonym", + "b4615" + ], + [ + "gene_synonym", + "yibV" + ] + ], + "dna_sequence": "TTGGCAGACAAAGCAATATTATGGGCACTAATATCAGCCAGTACTAAAGAGGGACGAAAAGCGTGTTCACTAAGCTATTTTGCCTGTAAGGCCGCAGAGGCTGAACTCGGACTGGCATATATGGCTGCGAATGATAACAAGGAATTTCTCACATCCTTATCTAATATAATGAGGTACAAAATAGATGCTGGACTTTCCGAATCCTATACATGCTATTTATTAAGTAAGGGAAAGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGAGAGTTAATAGTACTATTATGGCCATTGATGATTCTATAAAGTGCATCGATGAATGA", + "dna_sequence_length": 438, + "id": "CDS_3541", + "location": [ + [ + "NC_000913", + 3769345, + "+", + 327 + ], + [ + "NC_000913", + 3769673, + "+", + 111 + ] + ], + "md5": "44f44016c461bb4f3f2cd412151ac46f", + "parent_gene": "", + "protein_md5": "00a5e0d1afca1498744384a0e97aa721", + "protein_translation": "LADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4449" + ], + [ + "gene_synonym", + "EcoGene:EG14437" + ], + [ + "gene_synonym", + "GeneID:5625578" + ], + [ + "gene_synonym", + "b4652" + ], + [ + "gene_synonym", + "yibU" + ] + ], + "dna_sequence": "GACTGTCATCCTTCAGATAATAAAGCCATCATCGCAATAGATGGAAAAGCACTCCTGCTCTTTTTTGATTAGAGCCGTCGCAGGAGGGGAACAACTCATATCATCATTGCGATCTCGACGATGTATAGTCTCATCCTGCGGCAGAACAAGACGGATAAAAAATCCAATGAGAGCACACTCATCCAGAACTTATTAACATAA", + "dna_sequence_length": 201, + "id": "CDS_3542", + "location": [ + [ + "NC_000913", + 3769948, + "+", + 87 + ], + [ + "NC_000913", + 3770033, + "+", + 114 + ] + ], + "md5": "2c04b9b800fc9b27a60626ad8838f6de", + "parent_gene": "", + "protein_md5": "9b0bbee01fd2cc2f2cb6c3447a493e14", + "protein_translation": "DCHPSDNKAIIAIDGKALLLFFD", + "protein_translation_length": 23, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011752" + ], + [ + "gene_synonym", + "ECK3586" + ], + [ + "gene_synonym", + "EcoGene:EG11764" + ], + [ + "gene_synonym", + "GI:16131468" + ], + [ + "gene_synonym", + "GeneID:948110" + ], + [ + "gene_synonym", + "JW3571" + ], + [ + "gene_synonym", + "NP_418054.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFV0" + ], + [ + "gene_synonym", + "b3597" + ], + [ + "gene_synonym", + "yibH" + ] + ], + "dna_sequence": "ATGGATCTATTGATTGTTTTAACTTACGTGGCGCTGGCGTGGGCGGTCTTTAAAATCTTCCGCATTCCGGTAAATCAGTGGACGCTGGCGACGGCGGCGCTGGGAGGCGTGTTTCTGGTGAGTGGTTTGATTTTGTTGATGAACTACAACCACCCTTACACTTTTACCGCGCAAAAGGCAGTGATAGCGATCCCTATCACGCCACAGGTGACGGGAATTGTTACTGAAGTCACTGACAAGAATAATCAGCTTATTCAAAAGGGCGAGGTGCTTTTTAAGCTCGACCCGGTTCGTTACCAGGCGCGAGTTGACAGACTTCAGGCTGACCTGATGACGGCGACGCATAATATAAAGACGCTGCGTGCGCAGCTCACTGAAGCGCAGGCCAACACCACCCAGGTTTCAGCGGAGCGCGACCGTCTGTTTAAAAATTATCAACGTTACTTGAAAGGCAGCCAGGCGGCGGTGAATCCGTTCTCGGAACGTGACATCGACGATGCGCGGCAAAATTTCCTCGCGCAGGATGCGCTGGTGAAAGGCTCGGTGGCGGAGCAGGCGCAGATCCAGAGCCAGCTCGACAGTATGGTTAACGGCGAGCAATCGCAGATTGTGAGCTTAAGAGCGCAACTTACTGAAGCAAAATATAACCTTGAGCAGACTGTCATTCGCGCGCCGAGCAATGGCTACGTTACTCAGGTACTGATCCGCCCAGGTACATACGCAGCTGCCTTGCCGCTGCGTCCGGTGATGGTCTTCATCCCCGAGCAAAAACGGCAAATTGTCGCCCAATTTCGGCAAAACTCGCTGTTACGTCTGAAACCTGGCGATGATGCGGAAGTGGTGTTTAACGCGCTACCTGGGCAGGTGTTTCACGGCAAACTGACTAGTATTTTACCTGTCGTGCCAGGCGGTTCTTATCAGGCGCAGGGGGTATTGCAATCATTAACGGTCGTGCCCGGCACGGACGGTGTGCTGGGAACCATTGAACTGGACCCTAACGATGATATCGATGCCTTACCCGACGGCATCTACGCCCAGGTGGCGGTTTACTCCGACCATTTCAGCCATGTTTCGGTGATGCGGAAAGTGCTGCTAAGAATGACCAGCTGGATGCATTATCTTTATTTGGATCATTGA", + "dna_sequence_length": 1137, + "functions": [ + "putative membrane fusion protein (MFP) component of efflux pump" + ], + "id": "CDS_3543", + "location": [ + [ + "NC_000913", + 3771379, + "-", + 1137 + ] + ], + "md5": "14e0b385a62526658453289f84935579", + "parent_gene": "", + "protein_md5": "139fc176d0f5ba99233b005d9e43b246", + "protein_translation": "MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011754" + ], + [ + "gene_synonym", + "ECK3587" + ], + [ + "gene_synonym", + "EcoGene:EG11765" + ], + [ + "gene_synonym", + "GI:16131469" + ], + [ + "gene_synonym", + "GeneID:948109" + ], + [ + "gene_synonym", + "JW3572" + ], + [ + "gene_synonym", + "NP_418055.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32108" + ], + [ + "gene_synonym", + "b3598" + ], + [ + "gene_synonym", + "yibI" + ] + ], + "dna_sequence": "ATGTTTCTAAACTATTTCGCGTTGGGAGTGCTGATCTTCGTCTTTCTGGTGATTTTTTATGGAATCATCGCGATACATGACATCCCTTATCTGATTGCCAAAAAGCGCAACCATCCCCATGCCGACGCTATTCATACGGCGGGCTGGGTGAGCCTGTTTACTCTGCATGTTATCTGGCCGTTTCTGTGGATCTGGGCGACGCTCTATCAACCGGAGCGTGGCTGGGGTATGCAGTCACATGTTGCGTCGCAGGAGAAAGCGACTGACCCGGAAATCGCCGCACTTTCTGACCGAATTTCCCGGCTGGAGCATCAACTCGCCGCCGAGAAAAAGACTGACTATTCCACGTTCCCGGAGATCTAA", + "dna_sequence_length": 363, + "functions": [ + "DUF3302 family inner membrane protein" + ], + "id": "CDS_3544", + "location": [ + [ + "NC_000913", + 3771744, + "-", + 363 + ] + ], + "md5": "6e643eea357a1441e6fb14c75c6e6e82", + "parent_gene": "", + "protein_md5": "76ef4b0973c993f7f7c8a2ef5491fffa", + "protein_translation": "MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIAALSDRISRLEHQLAAEKKTDYSTFPEI", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011761" + ], + [ + "gene_synonym", + "ECK3588" + ], + [ + "gene_synonym", + "EcoGene:EG10615" + ], + [ + "gene_synonym", + "GI:16131470" + ], + [ + "gene_synonym", + "GeneID:948118" + ], + [ + "gene_synonym", + "JW3573" + ], + [ + "gene_synonym", + "NP_418056.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00550" + ], + [ + "gene_synonym", + "b3599" + ], + [ + "gene_synonym", + "mtlA" + ], + [ + "gene_synonym", + "mtlC" + ] + ], + "dna_sequence": "ATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACCGGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTCGGTGCCATCACCACCATGGGCGTTATCGTCGGCGCAGACATGCCGATGTTCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAACCGGCGAAAATCCTGTTCCTCAACAACGCCATTAACCACGGTATCTTCTCGCCGCTGGGTATTCAGCAGTCCCATGAACTGGGTAAATCAATCTTCTTCCTGATTGAAGCTAACCCAGGTCCAGGTATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGGGTTCTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGCTATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAATCATCGTTGCCTGTGACGCCGGTATGGGTTCCAGTGCGATGGGCGCAGGCGTTCTGCGTAAGAAAATTCAGGATGCAGGTCTGTCGCAGATTTCTGTTACTAACAGCGCGATCAACAACCTGCCGCCAGATGTGGACCTCGTCATCACTCACCGTGACCTGACCGAACGCGCTATGCGCCAGGTTCCGCAGGCACAGCATATTTCGCTGACCAACTTCCTCGACAGCGGCCTGTACACCAGCCTGACCGAACGTCTGGTTGCTGCCCAACGCCACACGGCAAACGAAGAGAAAGTAAAAGACAGCCTGAAAGACAGCTTTGACGATTCCAGTGCTAACCTGTTCAAGCTAGGCGCGGAGAACATCTTCCTCGGTCGCAAAGCGGCAACCAAAGAAGAAGCGATTCGTTTTGCTGGCGAGCAGCTGGTGAAAGGCGGTTACGTTGAGCCGGAATACGTTCAGGCGATGCTGGATCGTGAAAAACTGACCCCGACTTATCTGGGTGAGTCTATCGCGGTGCCACACGGTACGGTTGAAGCGAAAGATCGCGTACTGAAAACGGGCGTCGTGTTCTGCCAGTACCCGGAAGGCGTGCGCTTCGGTGAAGAAGAAGATGACATTGCCCGTCTGGTGATTGGTATTGCTGCCCGTAACAACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAA", + "dna_sequence_length": 1914, + "functions": [ + "mannitol-specific PTS enzyme: IIA, IIB and IIC components" + ], + "id": "CDS_3545", + "location": [ + [ + "NC_000913", + 3772281, + "+", + 1914 + ] + ], + "md5": "23bd018fa9ac32d9f2a47ca930c7b679", + "parent_gene": "", + "protein_md5": "faf86e27ecec86d8f8ab8b449c1508cc", + "protein_translation": "MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKMLAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILLKTSKVKEEDDIEAATRRMQDMKAESKGASPLSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHTANEEKVKDSLKDSFDDSSANLFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGRK", + "protein_translation_length": 637, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011767" + ], + [ + "gene_synonym", + "ECK3589" + ], + [ + "gene_synonym", + "EcoGene:EG10616" + ], + [ + "gene_synonym", + "GI:16131471" + ], + [ + "gene_synonym", + "GeneID:948117" + ], + [ + "gene_synonym", + "JW3574" + ], + [ + "gene_synonym", + "NP_418057.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09424" + ], + [ + "gene_synonym", + "b3600" + ], + [ + "gene_synonym", + "mtlD" + ] + ], + "dna_sequence": "ATGAAAGCATTACATTTTGGCGCAGGTAATATCGGTCGTGGCTTTATCGGTAAACTGCTGGCAGACGCGGGTATCCAACTGACGTTTGCCGATGTCAATCAGGTGGTACTTGATGCCCTGAATGCCCGTCATAGCTATCAGGTACATGTGGTTGGTGAAACCGAGCAGGTAGATACCGTTTCCGGCGTCAATGCTGTCAGCAGCATTGGTGATGATGTCGTTGATCTGATTGCTCAGGTTGATTTAGTCACTACCGCCGTTGGCCCGGTTGTGCTGGAACGTATTGCTCCGGCAATCGCCAAAGGGCAGGTGAAACGTAAAGAACAAGGTAATGAATCCCCGCTGAACATCATCGCCTGTGAAAACATGGTACGCGGTACCACGCAGCTGAAAGGCCATGTGATGAACGCCCTGCCGGAAGACGCCAAAGCGTGGGTAGAAGAACACGTTGGCTTTGTCGATTCCGCCGTTGACCGCATCGTACCGCCTTCGGCTTCGGCAACTAACGATCCGCTGGAAGTGACGGTAGAAACCTTCAGCGAATGGATTGTCGATAAAACGCAGTTCAAAGGCGCACTGCCGAACATCCCAGGCATGGAGTTAACCGACAACCTGATGGCATTTGTCGAACGTAAACTCTTCACCCTGAACACGGGTCATGCTATAACCGCGTACCTCGGAAAACTGGCCGGTCATCAGACCATTCGTGACGCGATTCTCGACGAGAAAATCCGCGCGGTGGTAAAAGGTGCGATGGAAGAAAGTGGTGCAGTATTGATCAAGCGCTACGGCTTTGACGCTGACAAGCATGCGGCGTACATCCAGAAAATTCTCGGCCGTTTTGAGAACCCGTATCTGAAAGATGATGTAGAGCGCGTAGGCCGTCAGCCACTGCGTAAACTGAGTGCTGGCGACCGTCTGATCAAGCCACTGCTCGGTACGCTGGAATATGGTCTGCCACATAAAAACCTGATTGAAGGTATTGCCGCTGCAATGCACTTCCGCAGTGAAGATGATCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAA", + "dna_sequence_length": 1149, + "functions": [ + "mannitol-1-phosphate dehydrogenase, NAD-dependent" + ], + "id": "CDS_3546", + "location": [ + [ + "NC_000913", + 3774424, + "+", + 1149 + ] + ], + "md5": "e9555993fa91392dcc486677bc958ef8", + "parent_gene": "", + "protein_md5": "55adc234ce102909a3a204887fe6fa3b", + "protein_translation": "MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGQVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRIVPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYGLPHKNLIEGIAAAMHFRSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011769" + ], + [ + "gene_synonym", + "ECK3590" + ], + [ + "gene_synonym", + "EcoGene:EG11965" + ], + [ + "gene_synonym", + "GI:16131472" + ], + [ + "gene_synonym", + "GeneID:948116" + ], + [ + "gene_synonym", + "JW3575" + ], + [ + "gene_synonym", + "NP_418058.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF10" + ], + [ + "gene_synonym", + "b3601" + ], + [ + "gene_synonym", + "mtlR" + ] + ], + "dna_sequence": "ATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAACTGCTGATGGCATTGCGTGAAGAGCTAAATCACGACGGCAACGAGTACGCCTTTACCGACGACGAAATCCTTGGACCCTTTGGTGAACTGCACTGCGTGGCGGCGTTACCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAA", + "dna_sequence_length": 588, + "functions": [ + "mannitol operon repressor" + ], + "id": "CDS_3547", + "location": [ + [ + "NC_000913", + 3775572, + "+", + 588 + ] + ], + "md5": "eb3e96881fd453f78f855172940903c9", + "parent_gene": "", + "protein_md5": "c6deb7847a6f01c74734deeba375556a", + "protein_translation": "MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSLYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285075" + ], + [ + "gene_synonym", + "ECK3591" + ], + [ + "gene_synonym", + "EcoGene:EG14397" + ], + [ + "gene_synonym", + "GI:94541127" + ], + [ + "gene_synonym", + "GeneID:1450299" + ], + [ + "gene_synonym", + "JW3576" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2M7R5" + ], + [ + "gene_synonym", + "YP_588470.1" + ], + [ + "gene_synonym", + "b4554" + ], + [ + "gene_synonym", + "yibT" + ] + ], + "dna_sequence": "ATGGGCAAATTAGGTGAAAACGTTCCGCTTCTTATCGATAAAGCCGTAGATTTCATGGCATCAAGCCAGGCGTTCCGGGAGTATCTGAAAAAACTTCCTCCCCGTAACGCGATTCCGTCCGGAATACCCGATGAAAGCGTGCCGTTATATCTACAACGTCTGGAGTATTATCGTCGGCTTTATCGGCCGAAGCAGGTAGAGGGGCAGTAA", + "dna_sequence_length": 210, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3548", + "location": [ + [ + "NC_000913", + 3776380, + "-", + 210 + ] + ], + "md5": "947e70685996e539fe6fe97f99f9170f", + "parent_gene": "", + "protein_md5": "9e0251c1867e1ba3e9df366e7925c3bc", + "protein_translation": "MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYRRLYRPKQVEGQ", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011773" + ], + [ + "gene_synonym", + "ECK3592" + ], + [ + "gene_synonym", + "EcoGene:EG11964" + ], + [ + "gene_synonym", + "GI:16131473" + ], + [ + "gene_synonym", + "GeneID:948115" + ], + [ + "gene_synonym", + "JW3577" + ], + [ + "gene_synonym", + "NP_418059.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADK8" + ], + [ + "gene_synonym", + "b3602" + ], + [ + "gene_synonym", + "yibL" + ] + ], + "dna_sequence": "ATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGCCGCAGACAAATATGCCGAGCTGGAAAAAGAGAAAGCCACGCTGGAAGCAGAAATTGCTCGCCTGCGTGAAGTTCATAGCCAAAAACTGAGTAAAGAAGCACAGAAGCTGATGAAGATGCCATTCCAGCGCGCAATTACCAAAAAAGAGCAGGCTGATATGGGCAAGCTGAAGAAAAGTGTTCGCGGACTGGTCGTTGTGCACCCAATGACCGCACTGGGCCGCGAAATGGGCCTGCAGGAGATGACTGGGTTTTCAAAGACCGCGTTTTAA", + "dna_sequence_length": 363, + "functions": [ + "ribosome-associated DUF2810 family protein" + ], + "id": "CDS_3549", + "location": [ + [ + "NC_000913", + 3776665, + "+", + 363 + ] + ], + "md5": "a263ac032c2714cfb1909807c3a4af0d", + "parent_gene": "", + "protein_md5": "acf1c175b982a03ecd877fb3c8e5bb5b", + "protein_translation": "MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLQEMTGFSKTAF", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011777" + ], + [ + "gene_synonym", + "ECK3593" + ], + [ + "gene_synonym", + "EcoGene:EG11961" + ], + [ + "gene_synonym", + "GI:16131474" + ], + [ + "gene_synonym", + "GeneID:948114" + ], + [ + "gene_synonym", + "JW3578" + ], + [ + "gene_synonym", + "NP_418060.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33231" + ], + [ + "gene_synonym", + "b3603" + ], + [ + "gene_synonym", + "lct" + ], + [ + "gene_synonym", + "lctP" + ], + [ + "gene_synonym", + "lldP" + ] + ], + "dna_sequence": "ATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGACGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGACATCATTCGCTCGTCTATTCTTTCGATAACCCCTGACCAGCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGTGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGACCATTATCGTGCTGTTCTGGATCATGGCGATTATGGACGGCTGGCGCGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGGCAGCACGCTGAAAGAACTGGCTCTGCCCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCCGCGCTGCAAGCCACCGCAGCACAACAAATTGGCGTCTCTGATCTGTTGCTGGTTGCCGCCAATACCACCGGTGGCGTCACCGGTAAGATGATCTCCCCGCAATCTATCGCTATCGCCTGTGCGGCGGTAGGCCTGGTGGGCAAAGAGTCTGATTTGTTCCGCTTTACTGTCAAACACAGCCTGATCTTCACCTGTATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAA", + "dna_sequence_length": 1656, + "functions": [ + "L-lactate permease" + ], + "id": "CDS_3550", + "location": [ + [ + "NC_000913", + 3777399, + "+", + 1656 + ] + ], + "md5": "f4f83dc514087968ee526031550d996b", + "parent_gene": "", + "protein_md5": "a66101ab71808bb5be1ba9b7a1acbe27", + "protein_translation": "MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAASWTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLCLIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWRGIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFRFGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEWVINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPSDAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCIVGVITTLQAYVLTWMIP", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011782" + ], + [ + "gene_synonym", + "ECK3594" + ], + [ + "gene_synonym", + "EcoGene:EG11962" + ], + [ + "gene_synonym", + "GI:16131475" + ], + [ + "gene_synonym", + "GeneID:948122" + ], + [ + "gene_synonym", + "JW3579" + ], + [ + "gene_synonym", + "NP_418061.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACL7" + ], + [ + "gene_synonym", + "b3604" + ], + [ + "gene_synonym", + "lct" + ], + [ + "gene_synonym", + "lctR" + ], + [ + "gene_synonym", + "lldR" + ] + ], + "dna_sequence": "ATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACATCAGGCTGTCATTGACGCCATTTTTGCCGGTGATGCTGACGGGGCGCGTAAAGCAATGATGGCGCACCTTAGTTTTGTTCACACCACCATGAAACGATTCGATGAAGATCAGGCTCGCCACGCACGGATTACCCGCCTGCCCGGTGAGCATAATGAGCATTCGAGGGAGAAAAACGCATGA", + "dna_sequence_length": 777, + "functions": [ + "dual role activator/repressor for lldPRD operon" + ], + "id": "CDS_3551", + "location": [ + [ + "NC_000913", + 3779054, + "+", + 777 + ] + ], + "md5": "0f5dd1abced6cf342f53be3e849874b9", + "parent_gene": "", + "protein_md5": "ea9fc0943b77b21ed777b870e6597352", + "protein_translation": "MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011784" + ], + [ + "gene_synonym", + "ECK3595" + ], + [ + "gene_synonym", + "EcoGene:EG11963" + ], + [ + "gene_synonym", + "GI:16131476" + ], + [ + "gene_synonym", + "GeneID:948121" + ], + [ + "gene_synonym", + "JW3580" + ], + [ + "gene_synonym", + "NP_418062.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33232" + ], + [ + "gene_synonym", + "b3605" + ], + [ + "gene_synonym", + "lct" + ], + [ + "gene_synonym", + "lctD" + ], + [ + "gene_synonym", + "lldD" + ] + ], + "dna_sequence": "ATGATTATTTCCGCAGCCAGCGATTATCGCGCCGCAGCGCAACGCATTCTGCCGCCGTTCCTGTTCCACTATATGGATGGTGGTGCATATTCTGAATACACGCTGCGCCGCAACGTGGAAGATTTGTCAGAAGTGGCGCTGCGCCAGCGTATTCTGAAAAACATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTAACGCGCTGGAGCGAGCAAAAGCAGCGGGTTGTTCGACGCTGGTTTTCACCGTGGATATGCCGACACCGGGCGCACGCTACCGTGATGCGCATTCAGGTATGAGCGGCCCGAACGCGGCAATGCGCCGCTACTTGCAAGCGGTGACACATCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTCGGCAAACCGACCGGACTGGAAGATTACATCGGCTGGCTGGGGAATAACTTCGATCCGTCCATCTCATGGAAAGACCTTGAATGGATCCGCGATTTCTGGGATGGCCCGATGGTGATCAAAGGGATCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAG", + "dna_sequence_length": 1191, + "functions": [ + "L-lactate dehydrogenase, FMN-linked" + ], + "id": "CDS_3552", + "location": [ + [ + "NC_000913", + 3779827, + "+", + 1191 + ] + ], + "md5": "3111c75769d71f4305329bcc31dccadb", + "parent_gene": "", + "protein_md5": "3c610efa1616d180507e6fc253961e25", + "protein_translation": "MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011790" + ], + [ + "gene_synonym", + "ECK3596" + ], + [ + "gene_synonym", + "EcoGene:EG11888" + ], + [ + "gene_synonym", + "GI:16131477" + ], + [ + "gene_synonym", + "GeneID:948119" + ], + [ + "gene_synonym", + "JW3581" + ], + [ + "gene_synonym", + "NP_418063.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGJ7" + ], + [ + "gene_synonym", + "b3606" + ], + [ + "gene_synonym", + "trmL" + ], + [ + "gene_synonym", + "yibK" + ] + ], + "dna_sequence": "ATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGCTGGACTATCACGAGTTTACCGCCGTTACGCGTCATCATGACTATCGCGCGTTCCTCGAAGCAGAAAATCCCCAGCGCCTGTTCGCCCTCACCACGAAAGGTACACCTGCTCACAGCGCCGTAAGCTATCAGGATGGCGATTATCTGATGTTCGGCCCGGAAACACGCGGCCTGCCAGCGAGCATTCTTGATGCCCTGCCCGCTGAACAAAAAATTCGCATTCCGATGGTGCCGGACAGCCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAG", + "dna_sequence_length": 474, + "functions": [ + "tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent" + ], + "id": "CDS_3553", + "location": [ + [ + "NC_000913", + 3781215, + "+", + 474 + ] + ], + "md5": "04737e5628adc16042ead6aa532cf23c", + "parent_gene": "", + "protein_md5": "252fd291be7ca9643cd0014f9def70e3", + "protein_translation": "MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011793" + ], + [ + "gene_synonym", + "ECK3597" + ], + [ + "gene_synonym", + "EcoGene:EG10187" + ], + [ + "gene_synonym", + "GI:16131478" + ], + [ + "gene_synonym", + "GeneID:948126" + ], + [ + "gene_synonym", + "JW3582" + ], + [ + "gene_synonym", + "NP_418064.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9D4" + ], + [ + "gene_synonym", + "b3607" + ], + [ + "gene_synonym", + "cysE" + ] + ], + "dna_sequence": "ATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTACTCAAGCACGAAAACCTTGGCAGTGCACTGAGCTACATGCTGGCGAACAAGCTGTCATCGCCAATTATGCCTGCTATTGCTATCCGTGAAGTGGTGGAAGAAGCCTACGCCGCTGACCCGGAAATGATCGCCTCTGCGGCCTGTGATATTCAGGCGGTGCGTACCCGCGACCCGGCAGTCGATAAATACTCAACCCCGTTGTTATACCTGAAGGGTTTTCATGCCTTGCAGGCCTATCGCATCGGTCACTGGTTGTGGAATCAGGGGCGTCGCGCACTGGCAATCTTTCTGCAAAACCAGGTTTCTGTGACGTTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGACGCTTGGCGGTACGGGTAAATCTGGTGGTGACCGTCACCCGAAAATTCGTGAAGGTGTGATGATTGGCGCGGGCGCGAAAATCCTCGGCAATATTGAAGTTGGGCGCGGCGCGAAGATTGGCGCAGGTTCCGTGGTGCTGCAACCGGTGCCGCCGCATACCACCGCCGCTGGCGTTCCGGCTCGTATTGTCGGTAAACCAGACAGCGATAAGCCATCAATGGATATGGACCAGCATTTCAACGGTATTAACCATACATTTGAGTATGGGGATGGGATCTAA", + "dna_sequence_length": 822, + "functions": [ + "serine acetyltransferase" + ], + "id": "CDS_3554", + "location": [ + [ + "NC_000913", + 3782562, + "-", + 822 + ] + ], + "md5": "b6a8b1a9c595a01f41e73aafe036e7d6", + "parent_gene": "", + "protein_md5": "dbf5255db46feff6ef72b63754671791", + "protein_translation": "MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI", + "protein_translation_length": 273, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011795" + ], + [ + "gene_synonym", + "ECK3598" + ], + [ + "gene_synonym", + "EcoGene:EG20091" + ], + [ + "gene_synonym", + "GI:16131479" + ], + [ + "gene_synonym", + "GeneID:948125" + ], + [ + "gene_synonym", + "JW3583" + ], + [ + "gene_synonym", + "NP_418065.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6S7" + ], + [ + "gene_synonym", + "b3608" + ], + [ + "gene_synonym", + "gpsA" + ] + ], + "dna_sequence": "ATGAACCAACGTAATGCTTCAATGACTGTGATCGGTGCCGGCTCGTACGGCACCGCTCTTGCCATCACCCTGGCAAGAAATGGCCACGAGGTTGTCCTCTGGGGCCATGACCCTGAACATATCGCAACGCTTGAACGCGACCGCTGTAACGCCGCGTTTCTCCCCGATGTGCCTTTTCCCGATACGCTCCATCTTGAAAGCGATCTCGCCACTGCGCTGGCAGCCAGCCGTAATATTCTCGTCGTCGTACCCAGCCATGTCTTTGGTGAAGTGCTGCGCCAGATTAAACCACTGATGCGTCCTGATGCGCGTCTGGTGTGGGCGACCAAAGGGCTGGAAGCGGAAACCGGACGTCTGTTACAGGACGTGGCGCGTGAGGCCTTAGGCGATCAAATTCCGCTGGCGGTTATCTCTGGCCCAACGTTTGCGAAAGAACTGGCGGCAGGTTTACCGACAGCTATTTCGCTGGCCTCGACCGATCAGACCTTTGCCGATGATCTCCAGCAGCTGCTGCACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTATGGGCATGGCGGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCGCCGTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGACGAGCGCAGCAGCCACTAA", + "dna_sequence_length": 1020, + "functions": [ + "glycerol-3-phosphate dehydrogenase (NAD+)" + ], + "id": "CDS_3555", + "location": [ + [ + "NC_000913", + 3783661, + "-", + 1020 + ] + ], + "md5": "56ffc9f309382f063048e900c11e8f6a", + "parent_gene": "", + "protein_md5": "1a8711b9d137a136af7ca5a23ee78b64", + "protein_translation": "MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011798" + ], + [ + "gene_synonym", + "ECK3599" + ], + [ + "gene_synonym", + "EcoGene:EG10937" + ], + [ + "gene_synonym", + "GI:16131480" + ], + [ + "gene_synonym", + "GeneID:948123" + ], + [ + "gene_synonym", + "JW3584" + ], + [ + "gene_synonym", + "NP_418066.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG86" + ], + [ + "gene_synonym", + "b3609" + ], + [ + "gene_synonym", + "secB" + ] + ], + "dna_sequence": "ATGTCAGAACAAAACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTATACGAAGTGGTACTGCGTGTTACCGTAACGGCCTCTTTGGGCGAAGAAACCGCGTTCCTGTGTGAAGTTCAGCAGGGCGGTATTTTCTCCATCGCGGGTATCGAAGGCACCCAGATGGCGCATTGCCTGGGAGCATACTGCCCGAACATTCTGTTCCCGTATGCTCGTGAGTGCATCACCAGCATGGTATCCCGCGGTACATTCCCGCAACTGAACCTTGCGCCGGTTAACTTCGATGCGCTGTTCATGAACTATTTGCAGCAGCAGGCTGGCGAAGGTACTGAAGAACATCAGGATGCCTGA", + "dna_sequence_length": 468, + "functions": [ + "protein export chaperone" + ], + "id": "CDS_3556", + "location": [ + [ + "NC_000913", + 3784128, + "-", + 468 + ] + ], + "md5": "8f660245f910953dea96cda1c3d5d1a0", + "parent_gene": "", + "protein_md5": "cdf158db6f741adec4ab6e18b09bab2a", + "protein_translation": "MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011801" + ], + [ + "gene_synonym", + "ECK3600" + ], + [ + "gene_synonym", + "EcoGene:EG12294" + ], + [ + "gene_synonym", + "GI:16131481" + ], + [ + "gene_synonym", + "GeneID:948132" + ], + [ + "gene_synonym", + "JW3585" + ], + [ + "gene_synonym", + "NP_418067.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC62" + ], + [ + "gene_synonym", + "b3610" + ], + [ + "gene_synonym", + "grxC" + ], + [ + "gene_synonym", + "yibM" + ] + ], + "dna_sequence": "ATGGCCAATGTTGAAATCTATACCAAAGAAACCTGCCCGTATTGCCATCGTGCAAAAGCACTGCTGAGCAGCAAGGGCGTGAGTTTCCAGGAGCTGCCGATCGATGGCAACGCCGCCAAGCGTGAAGAGATGATCAAACGCAGCGGTCGCACCACGGTTCCCCAGATTTTTATTGACGCACAGCACATTGGCGGCTGTGATGACTTGTATGCATTGGATGCACGTGGTGGACTGGATCCCCTGCTGAAATAA", + "dna_sequence_length": 252, + "functions": [ + "glutaredoxin 3" + ], + "id": "CDS_3557", + "location": [ + [ + "NC_000913", + 3784442, + "-", + 252 + ] + ], + "md5": "65bc2eba99b5a27e5446e459f1c36ffc", + "parent_gene": "", + "protein_md5": "e8c576ae9b777b43591ed7dca04bcfd9", + "protein_translation": "MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011805" + ], + [ + "gene_synonym", + "ECK3601" + ], + [ + "gene_synonym", + "EcoGene:EG12295" + ], + [ + "gene_synonym", + "GI:16131482" + ], + [ + "gene_synonym", + "GeneID:948131" + ], + [ + "gene_synonym", + "JW3586" + ], + [ + "gene_synonym", + "NP_418068.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG27" + ], + [ + "gene_synonym", + "b3611" + ], + [ + "gene_synonym", + "yibN" + ] + ], + "dna_sequence": "ATGCAAGAAATTATGCAATTTGTTGGCCGTCATCCCATACTGAGTATCGCCTGGATCGCGTTACTGGTGGCGGTTCTTGTGACTACGTTTAAGAGCCTGACCTCGAAAGTGAAGGTGATTACTCGTGGTGAAGCTACGCGTCTGATCAACAAAGAAGACGCTGTGGTTGTGGATTTACGTCAGCGTGATGACTTCCGTAAAGGCCATATCGCAGGTTCTATTAATCTGTTGCCGAGCGAAATCAAAGCCAACAATGTTGGTGAGCTTGAGAAGCACAAAGACAAACCGGTTATCGTGGTAGACGGTTCTGGCATGCAGTGCCAGGAGCCTGCAAACGCACTGACGAAAGCTGGTTTTGCGCAAGTATTCGTGCTGAAAGAAGGCGTCGCTGGCTGGGCTGGCGAAAACTTGCCTTTGGTGCGCGGCAAATAA", + "dna_sequence_length": 432, + "functions": [ + "putative rhodanese-related sulfurtransferase" + ], + "id": "CDS_3558", + "location": [ + [ + "NC_000913", + 3785015, + "-", + 432 + ] + ], + "md5": "3585b942fee284102f9d8b39c68e8502", + "parent_gene": "", + "protein_md5": "f93f64fdf3f900b3f6a70f31ea436868", + "protein_translation": "MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK", + "protein_translation_length": 143, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011818" + ], + [ + "gene_synonym", + "ECK3602" + ], + [ + "gene_synonym", + "EcoGene:EG12296" + ], + [ + "gene_synonym", + "GI:16131483" + ], + [ + "gene_synonym", + "GeneID:948130" + ], + [ + "gene_synonym", + "JW3587" + ], + [ + "gene_synonym", + "NP_418069.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37689" + ], + [ + "gene_synonym", + "b3612" + ], + [ + "gene_synonym", + "gpmC" + ], + [ + "gene_synonym", + "gpmI" + ], + [ + "gene_synonym", + "gpmM" + ], + [ + "gene_synonym", + "pgmI" + ], + [ + "gene_synonym", + "yibO" + ] + ], + "dna_sequence": "ATGTTGGTTTCTAAAAAACCTATGGTACTGGTGATTCTGGATGGCTATGGCTATCGCGAAGAACAGCAGGATAACGCCATTTTTAGTGCTAAAACCCCGGTAATGGATGCACTGTGGGCCAATCGTCCGCATACCCTAATCGACGCTTCCGGTCTGGAAGTCGGTCTGCCTGACCGTCAGATGGGTAACTCCGAAGTAGGCCACGTTAACCTGGGTGCCGGCCGCATCGTGTATCAGGACCTGACTCGTCTGGACGTTGAAATCAAAGATCGCGCTTTCTTTGCTAATCCGGTGCTGACTGGCGCGGTAGATAAAGCGAAAAACGCAGGCAAAGCGGTACACATTATGGGTCTGCTCTCCGCAGGCGGCGTACACAGCCACGAAGATCACATCATGGCGATGGTAGAACTGGCAGCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTCGCGCGTAAGAAAGTGGTTAACGTCGATTTCGTGATGCTGACCGAATACGCCGCTGACATCAAAACTGCGGTTGCTTACCCACCCGCTTCCCTGGTTAACACCTTCGGCGAGTGGATGGCGAAAAACGACAAAACTCAGTTGCGTATTTCCGAAACCGAAAAATATGCCCACGTTACTTTCTTCTTCAACGGTGGCGTAGAAGAGTCGTTCAAAGGCGAAGATCGCATTCTGATCAACTCACCGAAAGTGGCTACCTACGATCTGCAACCGGAAATGAGCTCCGCAGAGCTGACCGAAAAACTGGTTGCGGCCATCAAGAGCGGCAAATACGACACCATCATCTGTAACTATCCGAACGGCGACATGGTAGGTCACACCGGGGTGATGGAAGCGGCGGTTAAAGCGGTTGAAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGTTGAAGGCGGCAAACTTTCTGACATCGCGCCGACCATGTTGTCGCTGATGGGTATGGAAATCCCGCAAGAGATGACTGGTAAGCCGCTGTTCATCGTGGAATAA", + "dna_sequence_length": 1545, + "functions": [ + "phosphoglycero mutase III, cofactor-independent" + ], + "id": "CDS_3559", + "location": [ + [ + "NC_000913", + 3785260, + "+", + 1545 + ] + ], + "md5": "6f9d065a6c8086e8bbd6d9bec1cfdb84", + "parent_gene": "", + "protein_md5": "18d9078823e96bd4617edbb417129a72", + "protein_translation": "MLVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE", + "protein_translation_length": 514, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011820" + ], + [ + "gene_synonym", + "ECK3603" + ], + [ + "gene_synonym", + "EcoGene:EG12297" + ], + [ + "gene_synonym", + "GI:162135913" + ], + [ + "gene_synonym", + "GeneID:948129" + ], + [ + "gene_synonym", + "JW5646" + ], + [ + "gene_synonym", + "NP_418070.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37690" + ], + [ + "gene_synonym", + "b3613" + ], + [ + "gene_synonym", + "envC" + ], + [ + "gene_synonym", + "slm11" + ], + [ + "gene_synonym", + "yibP" + ] + ], + "dna_sequence": "ATGACACGGGCCGTGAAACCGCGCAGGTTTGCAATCAGGCCCATCATCTACGCCAGCGTTCTTAGCGCTGGCGTATTGTTGTGCGCCTTTTCCGCCCACGCGGATGAGCGTGACCAACTCAAATCTATTCAGGCTGACATCGCCGCAAAAGAGCGCGCGGTACGCCAAAAGCAACAACAACGCGCAAGCCTGCTCGCACAATTGAAAAAGCAGGAAGAAGCGATCTCTGAAGCCACCCGTAAGCTGCGCGAAACGCAAAACACGCTCAATCAACTCAATAAACAGATTGATGAGATGAACGCGTCGATTGCCAAACTGGAGCAGCAAAAAGCCGCCCAGGAGCGCAGCCTCGCCGCACAACTGGATGCCGCATTCCGTCAGGGCGAGCATACCGGTATTCAGCTGATTCTCAGCGGTGAAGAAAGCCAGCGTGGACAGCGTTTACAGGCTTATTTCGGCTATCTCAACCAGGCGCGACAAGAAACCATTGCCCAGTTGAAGCAAACGCGTGAAGAAGTCGCCATGCAGCGTGCTGAACTGGAAGAGAAACAGAGCGAGCAACAAACGCTGTTATATGAGCAGCGCGCCCAACAGGCGAAACTGACTCAGGCGCTGAACGAGCGTAAAAAGACGCTGGCAGGGCTGGAGTCTTCCATCCAGCAAGGTCAGCAACAGTTGAGCGAGCTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCCGACGGTCGGGTGATTCTGGCTGACTGGCTGCAAGGCTACGGTCTGGTGGTGGTGGTTGAGCATGGTAAAGGCGACATGAGTCTTTACGGCTATAATCAGAGCGCACTGGTGAGCGTTGGTTCGCAGGTTCGCGCGGGCCAGCCGATTGCACTGGTGGGCAGCAGTGGCGGTCAGGGTCGGCCTTCACTCTATTTCGAAATTCGCCGCCAGGGTCAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAA", + "dna_sequence_length": 1260, + "functions": [ + "activator of AmiB,C murein hydrolases, septal ring factor" + ], + "id": "CDS_3560", + "location": [ + [ + "NC_000913", + 3786838, + "+", + 1260 + ] + ], + "md5": "ddd666ab573a0d18535f3000e7b72505", + "parent_gene": "", + "protein_md5": "17b0e09e68d23fd9b8cfcac95bda5fe2", + "protein_translation": "MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011824" + ], + [ + "gene_synonym", + "ECK3604" + ], + [ + "gene_synonym", + "EcoGene:EG12298" + ], + [ + "gene_synonym", + "GI:90111621" + ], + [ + "gene_synonym", + "GeneID:948128" + ], + [ + "gene_synonym", + "JW5645" + ], + [ + "gene_synonym", + "NP_418071.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37691" + ], + [ + "gene_synonym", + "b3614" + ], + [ + "gene_synonym", + "yibQ" + ] + ], + "dna_sequence": "TTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCTCCTCCCCCGTACTTGCTGGCAAACTTGCCATCGTCATTGATGATTTTGGGTATCGCCCGCACAACGAAAACCAGGTGCTGGCGATGCCTTCCGCTATCTCCGTCGCTGTATTACCCGATTCACCGCACGCCAGAGAGATGGCGACCAAAGCGCATAACAGCGGGCACGAAGTGTTGATTCATCTCCCGATGGCACCGTTGAGTAAACAGCCGCTGGAGAAAAATACGCTACGCCCGGAGATGAGCAGCGACGAAATTGAGCGCATTATTCGTAGTGCGGTCAATAACGTGCCCTATGCCGTGGGGATCAACAACCACATGGGCAGCAAGATGACCTCTAACCTGTTTGGTATGCAGAAAGTGATGCAGGCGCTGGAGCGTTACAATCTTTACTTCCTCGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGAAAGCATCAGCCAGAGCACGCTGATCGTTTACTTCCAGCATCAGTGGCAAGGCTGGGGCAAACAGCCCGAAGCGGCGAAGTTTAACGCTAGCGCAAATTAA", + "dna_sequence_length": 960, + "functions": [ + "putative polysaccharide deacetylase" + ], + "id": "CDS_3561", + "location": [ + [ + "NC_000913", + 3788101, + "+", + 960 + ] + ], + "md5": "0acf89485752989046b4ed298384c5b6", + "parent_gene": "", + "protein_md5": "f6b373a1f343429f4ab9a7b3b3e187a2", + "protein_translation": "MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011826" + ], + [ + "gene_synonym", + "ECK3605" + ], + [ + "gene_synonym", + "EcoGene:EG11266" + ], + [ + "gene_synonym", + "GI:16131486" + ], + [ + "gene_synonym", + "GeneID:948140" + ], + [ + "gene_synonym", + "JW3590" + ], + [ + "gene_synonym", + "NP_418072.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11290" + ], + [ + "gene_synonym", + "b3615" + ], + [ + "gene_synonym", + "waaH" + ], + [ + "gene_synonym", + "yibD" + ] + ], + "dna_sequence": "ATGATGAACAGCACCAATAAACTTAGTGTTATTATTCCGTTATATAATGCGGGCGATGATTTCCGCACTTGTATGGAATCTTTAATTACGCAAACCTGGACTGCTCTGGAAATCATTATTATTAACGATGGTTCAACGGATAATTCTGTTGAAATAGCAAAGTATTACGCAGAAAACTATCCGCACGTTCGTTTGTTGCATCAGGCGAATGCTGGCGCATCGGTGGCGCGTAATCGTGGGATTGAAGTGGCAACGGGCAAATATGTCGCTTTTGTCGATGCTGACGATGAAGTCTATCCCACCATGTACGAAACGCTGATGACCATGGCGTTAGAGGACGACCTCGACGTGGCGCAGTGCAACGCTGACTGGTGTTTTCGTGAAACGGGAGAAACCTGGCAATCCATCCCCACCGATCGCCTTCGCTCAACCGGCGTATTAACCGGCCCGGACTGGCTGCGGATGGGGCTTTCTTCGCGCCGTTGGACTCACGTTGTCTGGATGGGGGTTTATCGCCGTGATGTTATTGTTAAAAATAACATTAAATTTATTGCCGGATTACATCATCAGGATATTGTCTGGACAACAGAATTCATGTTTAACGCGCTGCGTGCGCGATATACCGAGCAATCATTATATAAATATTATCTGCATAATACGTCAGTGAGTCGGTTGCATAGACAAGGGAATAAAAACCTTAATTATCAACGTCACTATATTAAGATTACCCGCCTGCTGGAGAAATTAAATCGAAATTATGCCGACAAAATTATGATTTATCCGGAATTTCATCAGCAAATAACTTACGAGGCATTGCGTGTTTGCCATGCGGTGCGCAAAGAGCCGGATATTCTTACCCGCCAACGGATGATTGCCGAGATATTTACTTCCGGTATGTATAAGCGCCTGATTACCAATGTGCGCAGCGTGAAGGTCGGTTACCAGGCGTTACTGTGGTCTTTCCGCTTATGGCAATGGCGCGACAAAACGCGGTCGCACCATCGCATTACGCGTAGCGCCTTTAATTTGCGCTAG", + "dna_sequence_length": 1035, + "functions": [ + "LPS(HepIII)-glucuronic acid glycosyltransferase" + ], + "id": "CDS_3562", + "location": [ + [ + "NC_000913", + 3790081, + "-", + 1035 + ] + ], + "md5": "aef27157d810cec8d4f7cd714e718af0", + "parent_gene": "", + "protein_md5": "1e3e4c86db4c77c02d00ccbbb709a1de", + "protein_translation": "MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKYYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQCNADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKIMIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011830" + ], + [ + "gene_synonym", + "ECK3606" + ], + [ + "gene_synonym", + "EcoGene:EG10993" + ], + [ + "gene_synonym", + "GI:16131487" + ], + [ + "gene_synonym", + "GeneID:948139" + ], + [ + "gene_synonym", + "JW3591" + ], + [ + "gene_synonym", + "NP_418073.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07913" + ], + [ + "gene_synonym", + "b3616" + ], + [ + "gene_synonym", + "tdh" + ] + ], + "dna_sequence": "ATGAAAGCGTTATCCAAACTGAAAGCGGAAGAGGGCATCTGGATGACCGACGTTCCTGTACCGGAACTCGGGCATAACGATCTGCTGATTAAAATCCGTAAAACAGCCATCTGCGGGACTGACGTTCACATCTATAACTGGGATGAGTGGTCGCAAAAAACCATCCCGGTGCCGATGGTCGTGGGCCATGAATATGTCGGTGAAGTGGTAGGTATTGGTCAGGAAGTGAAAGGCTTCAAGATCGGCGATCGCGTTTCTGGCGAAGGCCATATCACCTGTGGTCATTGCCGCAACTGTCGTGGTGGTCGTACCCATTTGTGCCGCAACACGATAGGCGTTGGTGTTAATCGCCCGGGCTGCTTTGCCGAATATCTGGTGATCCCGGCATTCAACGCCTTCAAAATCCCCGACAATATTTCCGATGACTTAGCCGCAATTTTTGATCCCTTCGGTAACGCCGTGCATACCGCGCTGTCGTTTGATCTGGTGGGCGAAGATGTGCTGGTTTCTGGTGCAGGCCCGATTGGTATTATGGCAGCGGCGGTGGCGAAACACGTTGGTGCACGCAATGTGGTGATCACTGATGTTAACGAATACCGCCTTGAGCTGGCGCGTAAAATGGGTATCACCCGTGCGGTTAACGTCGCCAAAGAAAATCTCAATGACGTGATGGCGGAGTTAGGCATGACCGAAGGTTTTGATGTCGGTCTGGAAATGTCCGGTGCGCCGCCAGCGTTTCGTACCATGCTTGACACCATGAATCACGGCGGCCGTATTGCGATGCTGGGTATTCCGCCGTCTGATATGTCTATCGACTGGACCAAAGTGATCTTTAAAGGCTTGTTCATTAAAGGTATTTACGGTCGTGAGATGTTTGAAACCTGGTACAAGATGGCGGCGCTGATTCAGTCTGGCCTCGATCTTTCGCCGATCATTACCCATCGTTTCTCTATCGATGATTTCCAGAAGGGCTTTGACGCTATGCGTTCGGGCCAGTCCGGGAAAGTTATTCTGAGCTGGGATTAA", + "dna_sequence_length": 1026, + "functions": [ + "L-threonine 3-dehydrogenase, NAD(P)-binding" + ], + "id": "CDS_3563", + "location": [ + [ + "NC_000913", + 3791345, + "-", + 1026 + ] + ], + "md5": "ddcf07e8ad09a18bb852d33049443c0b", + "parent_gene": "", + "protein_md5": "12d3d05862c436a455609c62328231ec", + "protein_translation": "MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011832" + ], + [ + "gene_synonym", + "ECK3607" + ], + [ + "gene_synonym", + "EcoGene:EG10512" + ], + [ + "gene_synonym", + "GI:16131488" + ], + [ + "gene_synonym", + "GeneID:948138" + ], + [ + "gene_synonym", + "JW3592" + ], + [ + "gene_synonym", + "NP_418074.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB77" + ], + [ + "gene_synonym", + "b3617" + ], + [ + "gene_synonym", + "kbl" + ] + ], + "dna_sequence": "ATGCGTGGAGAATTTTATCAGCAGTTAACCAACGATCTGGAAACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTGCGGCGGCAAAGGCGGGAATGGATTCTCACGGTTTCGGCATGGCTTCGGTGCGTTTTATTTGCGGCACTCAGGACAGCCATAAAGAGCTTGAACAAAAACTGGCGGCCTTCCTGGGGATGGAAGATGCGATTCTCTACTCTTCCTGCTTTGATGCTAACGGTGGCCTGTTTGAAACGCTTCTGGGTGCGGAAGACGCCATTATCTCCGACGCACTGAACCACGCGTCTATTATTGATGGTGTGCGTCTGTGCAAAGCTAAACGCTATCGCTATGCCAACAACGATATGCAGGAGCTGGAAGCACGTCTGAAAGAAGCGCGTGAAGCCGGTGCGCGTCATGTGCTGATCGCCACCGATGGTGTGTTCTCAATGGACGGCGTGATTGCCAACCTGAAGGGCGTTTGCGATCTGGCAGATAAATATGATGCCCTGGTGATGGTAGACGACTCCCACGCGGTCGGTTTTGTCGGTGAAAATGGTCGTGGTTCCCATGAATACTGCGATGTGATGGGCCGGGTCGATATTATCACCGGTACGCTTGGTAAAGCGCTGGGCGGGGCTTCTGGTGGTTATACCGCGGCGCGCAAAGAAGTGGTTGAGTGGCTGCGCCAGCGTTCTCGTCCGTACCTGTTCTCCAACTCGCTGGCACCGGCCATTGTTGCCGCGTCCATCAAAGTACTGGAGATGGTCGAAGCGGGCAGCGAACTGCGTGACCGTCTGTGGGCGAACGCGCGTCAGTTCCGTGAGCAAATGTCGGCGGCGGGCTTTACCCTGGCGGGAGCCGATCACGCCATTATTCCGGTCATGCTTGGTGATGCGGTAGTGGCGCAGAAATTTGCCCGTGAGCTGCAAAAAGAGGGCATTTACGTTACCGGTTTCTTCTATCCGGTCGTTCCGAAAGGTCAGGCGCGTATTCGTACCCAGATGTCTGCGGCGCATACCCCTGAGCAAATTACGCGTGCAGTAGAAGCATTTACGCGTATTGGTAAACAACTGGGCGTTATCGCCTGA", + "dna_sequence_length": 1197, + "functions": [ + "glycine C-acetyltransferase" + ], + "id": "CDS_3564", + "location": [ + [ + "NC_000913", + 3792551, + "-", + 1197 + ] + ], + "md5": "ab9a426a978a07ee51c6a0f475af6fe2", + "parent_gene": "", + "protein_md5": "05afc641074561bb7c3cff9689e350ff", + "protein_translation": "MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011838" + ], + [ + "gene_synonym", + "ECK3608" + ], + [ + "gene_synonym", + "EcoGene:EG11188" + ], + [ + "gene_synonym", + "GI:90111622" + ], + [ + "gene_synonym", + "GeneID:948137" + ], + [ + "gene_synonym", + "JW5644" + ], + [ + "gene_synonym", + "NP_418075.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25666" + ], + [ + "gene_synonym", + "b3618" + ], + [ + "gene_synonym", + "htrL" + ], + [ + "gene_synonym", + "yibB" + ] + ], + "dna_sequence": "ATGAAATCATCCACCACAATTATCACTGCATATTTTGACATTGGTAGAGGGGATTGGACTGCTAATAAAGGGTTCCGTGAAAAACTAGCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGGTTATCGTTATCGATATAAAAAAGAAATTTAGATATATCAGAAGTCGTATCGAAAAAATTCAAAAAGATGAGTCGTTTACAAATAGACTTGAGCCTCGACAATTAAAAAACCCAGAGTACTGGTCACCAGAGTATGTTTTGGTATGTAACCTTAAGGCCTATTTTGTAAATAAAGCTATCAACATGGGCTTAGTGAAAACGCCTCTTGTTGCGTGGATAGATTTTGGCTATTGCCATAAGCCAAATGTAACTCGAGGATTGAAAATTTGGGATTTCCCATTTGATGAAAGTAAGATGCATCTTTTCACTATAAAAAAAGGGCTTACTGTCACATCTCAACAACAGGTTTTTGATTTCATGATTGGCAATCATGTATATATTATTGGGGGCGCAATTGTTGGTTCACAGCATAAATGGAAAGAATTCTATAAATTAGTTCTGGAAAGTCAAAAAATAACACTAAATAATAACATTGTGGACGATGACCAGGGCATTTTTGTCATGTGCTATTACAAACGCCCCGATCTCTTCAACCTAAACTATCTGGGGAGAGGAAAATGGTTCGATTTGTTTCGCTGCTTCAGGAGTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGAAAATAG", + "dna_sequence_length": 858, + "functions": [ + "YibB family protein, function unknown" + ], + "id": "CDS_3565", + "location": [ + [ + "NC_000913", + 3793683, + "-", + 858 + ] + ], + "md5": "5e5a734fcb97fcd84e7d4a96d6614e08", + "parent_gene": "", + "protein_md5": "cf898b0287c333eeef482cb77870fe8c", + "protein_translation": "MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011843" + ], + [ + "gene_synonym", + "ECK3609" + ], + [ + "gene_synonym", + "EcoGene:EG10838" + ], + [ + "gene_synonym", + "GI:16131490" + ], + [ + "gene_synonym", + "GeneID:948134" + ], + [ + "gene_synonym", + "JW3594" + ], + [ + "gene_synonym", + "NP_418076.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67910" + ], + [ + "gene_synonym", + "b3619" + ], + [ + "gene_synonym", + "gmhD" + ], + [ + "gene_synonym", + "hldD" + ], + [ + "gene_synonym", + "htrM" + ], + [ + "gene_synonym", + "nbsB" + ], + [ + "gene_synonym", + "rfaD" + ], + [ + "gene_synonym", + "waaD" + ] + ], + "dna_sequence": "ATGATCATCGTTACCGGCGGCGCGGGCTTTATCGGCAGCAACATCGTTAAAGCCCTGAATGATAAAGGCATCACCGATATTCTGGTGGTGGACAACCTGAAAGACGGCACCAAGTTTGTGAACCTGGTGGATCTGAATATCGCAGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCAGCTTAACAACGGTGAATCACCGAAGCTGTTTGAAGGTAGCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCTACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCGTTCAAAACCGTTGCTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAA", + "dna_sequence_length": 933, + "functions": [ + "ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding" + ], + "id": "CDS_3566", + "location": [ + [ + "NC_000913", + 3793987, + "+", + 933 + ] + ], + "md5": "ffb4a7a8516abb3ecdece2ba9ff71873", + "parent_gene": "", + "protein_md5": "d42624d49e07b165ca8ce2c4357ecf2d", + "protein_translation": "MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011845" + ], + [ + "gene_synonym", + "ECK3610" + ], + [ + "gene_synonym", + "EcoGene:EG12210" + ], + [ + "gene_synonym", + "GI:16131491" + ], + [ + "gene_synonym", + "GeneID:948135" + ], + [ + "gene_synonym", + "JW3595" + ], + [ + "gene_synonym", + "NP_418077.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37692" + ], + [ + "gene_synonym", + "b3620" + ], + [ + "gene_synonym", + "rfaF" + ], + [ + "gene_synonym", + "waaF" + ] + ], + "dna_sequence": "ATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATCGCGGATGCCGGAAGTTAACGAAGCTATTCCTATGCCTCTCGGTCACGGAGCGCTGGAAATCGGCGAACGCCGCAAACTGGGTCATAGCCTGCGTGAAAAGCGCTACGACCGCGCCTACGTCTTACCCAACTCCTTCAAATCTGCATTAGTGCCTTTCTTCGCGGGTATTCCTCATCGCACCGGCTGGCGCGGCGAGATGCGCTACGGTTTACTCAACGATGTACGCGTGCTCGATAAAGAAGCCTGGCCGCTAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGGTCCGGCAAAACGCTGGCCACACTACCACTATGCGGAGCTGGCAAAGCAGCTGATTGATGAAGGTTATCAGGTGGTTCTGTTTGGCTCGGCGAAAGATCATGAAGCGGGCAATGAGATTCTTGCCGCTTTGAATACCGAGCAGCAGGCATGGTGTCGGAACCTGGCGGGGGAAACACAGCTTGATCAAGCGGTTATCCTGATTGCAGCCTGTAAAGCCATTGTCACTAACGATTCTGGCCTGATGCATGTTGCGGCGGCGCTCAATCGTCCGCTGGTTGCCCTGTATGGTCCGAGTAGCCCGGACTTCACACCGCCGCTATCCCATAAAGCGCGCGTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGCCTGA", + "dna_sequence_length": 1047, + "functions": [ + "ADP-heptose:LPS heptosyltransferase II" + ], + "id": "CDS_3567", + "location": [ + [ + "NC_000913", + 3794929, + "+", + 1047 + ] + ], + "md5": "d1e8614854396b9fdcd94f150b095df7", + "parent_gene": "", + "protein_md5": "c06eb074ad8381e36e1846f5c56d7b2c", + "protein_translation": "MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYIALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011847" + ], + [ + "gene_synonym", + "ECK3611" + ], + [ + "gene_synonym", + "EcoGene:EG11189" + ], + [ + "gene_synonym", + "GI:16131492" + ], + [ + "gene_synonym", + "GeneID:948136" + ], + [ + "gene_synonym", + "JW3596" + ], + [ + "gene_synonym", + "NP_418078.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24173" + ], + [ + "gene_synonym", + "b3621" + ], + [ + "gene_synonym", + "rfaC" + ], + [ + "gene_synonym", + "waaC" + ], + [ + "gene_synonym", + "yibC" + ] + ], + "dna_sequence": "ATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGCACAGATTCCTTCCTGGCACGCTGCCGTTGAGCGAGTTATTCCTGTGGCAATACGTCGCTGGCGTAAAGCCTGGTTCTCGGCCCCCATAAAAGCGGAACGCAAAGCGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAGCACGCCGTAGAACGCACCCGCGAACTGTTTGCCAAAAGTTTGGGCTATAGCAAACCGCAAACCCAGGGCGATTATGCTATCGCACAGCATTTTCTGACGAACCTGCCTACAGATGCTGGCGAATATGCCGTATTTCTTCATGCGACGACCCGTGATGATAAACACTGGCCGGAAGAACACTGGCGAGAATTGATTGGTTTACTGGCTGATTCAGGAATACGGATTAAACTTCCGTGGGGCGCGCCGCATGAGGAAGAACGGGCGAAACGACTGGCGGAAGGATTTGCTTATGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAA", + "dna_sequence_length": 960, + "functions": [ + "ADP-heptose:LPS heptosyl transferase I" + ], + "id": "CDS_3568", + "location": [ + [ + "NC_000913", + 3795979, + "+", + 960 + ] + ], + "md5": "daecfe184a664452c6424420c92f198a", + "parent_gene": "", + "protein_md5": "2bf83ea01d6f83c16c0aaced1463fed0", + "protein_translation": "MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPRENLINLNSQAVLEKLSSL", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011849" + ], + [ + "gene_synonym", + "ECK3612" + ], + [ + "gene_synonym", + "EcoGene:EG11424" + ], + [ + "gene_synonym", + "GI:16131493" + ], + [ + "gene_synonym", + "GeneID:948148" + ], + [ + "gene_synonym", + "JW3597" + ], + [ + "gene_synonym", + "NP_418079.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27243" + ], + [ + "gene_synonym", + "b3622" + ], + [ + "gene_synonym", + "rfaL" + ], + [ + "gene_synonym", + "waaL" + ] + ], + "dna_sequence": "ATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGATAATAACTTATATATTATGTTTTTTTTCAATGATAATTGCATTCGTCGATAATACTTTCAGCATAAAAATATATAATATCACTGCTATAGTTTGCTTATTGTCACTAATTTTACGTGGCAGACAAGAAAATTATAATATAAAAAACCTTATTCTTCCCCTTTCTATATTTTTAATAGGCTTGCTTGATTTAATTTGGTATTCTGCGTTTAAAGTAGATAATTCGCCATTTCGTGCTACTTACCATAGTTATTTAAATACTGCCAAAATATTTATATTTGGTTCTTTTATTGTTTTCTTGACACTAACTAGCCAGCTAAAATCAAAAAAAGAGAGTGTATTATACACTTTGTATTCTCTGTCATTTCTAATTGCTGGATATGCAATGTATATTAATAGCATTCATGAAAATGACCGCATTTCTTTTGGTGTAGGAACGGCAACAGGAGCAGCATATTCAACAATGCTAATAGGGATAGTTAGTGGCGTTGCGATTCTTTATACTAAGAAAAATCATCCTTTTTTATTTTTATTAAATAGTTGCGCGGTACTTTATGTTCTGGCGCTAACACAAACCAGAGCAACCCTACTCCTGTTCCCTATAATTTGTGTTGCTGCATTAATAGCTTATTATAATAAATCACCCAAGAAATTCACTTCCTCTATTGTTCTACTAATTGCTATATTAGCTAGCATTGTTATTATATTTAATAAACCAATACAGAATCGCTATAATGAAGCATTAAATGACTTAAACAGTTATACCAATGCTAATAGTGTTACTTCCCTAGGTGCAAGACTGGCAATGTACGAAATTGGTTTAAATATATTCATAAAGTCACCTTTTTCATTTAGATCAGCAGAGTCACGCGCTGAAAGTATGAATTTGTTAGTTGCAGAACACAATAGGCTAAGAGGGGCATTGGAGTTTTCTAACGTACATCTACATAATGAGATAATTGAAGCAGGGTCACTGAAAGGTCTGATGGGAATTTTTTCCACACTTTTCCTCTATTTTTCACTATTTTATATAGCATATAAAAAACGAGCTTTGGGTTTGTTGATATTAACGCTTGGCATTGTGGGGATTGGACTCAGTGATGTGATCATATGGGCACGCAGCATTCCAATTATCATTATATCCGCTATAGTCCTCTTACTCGTCATTAATAATCGTAACAATACAATTAATTAA", + "dna_sequence_length": 1260, + "functions": [ + "O-antigen ligase" + ], + "id": "CDS_3569", + "location": [ + [ + "NC_000913", + 3796948, + "+", + 1260 + ] + ], + "md5": "843b6dae3952e7817e65a46a721806ff", + "parent_gene": "", + "protein_md5": "92583900408b902431a8b1e8cbc84e5f", + "protein_translation": "MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011851" + ], + [ + "gene_synonym", + "ECK3613" + ], + [ + "gene_synonym", + "EcoGene:EG11423" + ], + [ + "gene_synonym", + "GI:16131494" + ], + [ + "gene_synonym", + "GeneID:948147" + ], + [ + "gene_synonym", + "JW3598" + ], + [ + "gene_synonym", + "NP_418080.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27242" + ], + [ + "gene_synonym", + "b3623" + ], + [ + "gene_synonym", + "rfaK" + ], + [ + "gene_synonym", + "waaK" + ], + [ + "gene_synonym", + "waaU" + ] + ], + "dna_sequence": "ATGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCCTTTCTTTTTTATTTCGTAATAAAATAAATAATCAAATTACAGATCCAGCACAAGTTAAATCATGCCTTATTATTCATGATAATAATAAACTTGGTGATCTAATTGTATTAAGTTCGATTTATCGTGAACTTTATAGTAAAGGGGTTAAAATAACTCTTCTCACAAATAGAAAGGGTGGGGAATTTCTCTCTAATAATAAAAATATATTTGAGTTCTGTATTAAAGAATCAACCGGTTTTCTTGAAATGCTTACTCTATGTAAGCATCTGCGGGATTTACAGTTCGATATTGTATTAGACCCCTTTGAAACTATGCCCTCATTTAAGCATAGCTTAATATTATCAAGTTTAAAAGATTCTTACATTCTGGGTTTTGATCATTGGTATAAGCGTTACTATTCATTTTACCATCCCCACGATGAATGTTTAAAAGAACATATGAGTACACGAGCAATAGAAATACTGAAGCATATTTATGGTGAGGGTAAATTTTCCACCAACTACGACTTGCATTTACCAGTAGATGTTGAAGATAAAATAAAAGAATTTATTGGAGATACAAGAATAGTCATTATTAATCCATTAGGTGCAAAAAAAATATGCCGTCTTACGTTTGAGCAAATAAAAGTTATATATCAAGAAGTGAAAACACACTTTGAAAATTATCGGATTATATTTACCGGGTTACCGCAAGATTTATTGACAATACCAATACTTGAAATCGAAACACTACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAAGTATAGTGATTTTGTCATTTCTGTTGATACAGCTCTTGTTCATATCGCTGCGGCTTATCATAAACCAACGCTTGCATTTTACCCTAATTCACGTACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCAACATATACGGTAAAAGATATCGATACTGAAACTTTAACTAATTCAGTAAAGAGATTAAGTTGTATAGATAAGAAGTGA", + "dna_sequence_length": 1074, + "functions": [ + "lipopolysaccharide core biosynthesis" + ], + "id": "CDS_3570", + "location": [ + [ + "NC_000913", + 3799312, + "-", + 1074 + ] + ], + "md5": "8cddbcc1b5f95b69513e6a3c056ce146", + "parent_gene": "", + "protein_md5": "abfb562220e95ca85a1426aeaa09317d", + "protein_translation": "MRLGTFHKKKRFYINKIKINFLSFLFRNKINNQITDPAQVKSCLIIHDNNKLGDLIVLSSIYRELYSKGVKITLLTNRKGGEFLSNNKNIFEFCIKESTGFLEMLTLCKHLRDLQFDIVLDPFETMPSFKHSLILSSLKDSYILGFDHWYKRYYSFYHPHDECLKEHMSTRAIEILKHIYGEGKFSTNYDLHLPVDVEDKIKEFIGDTRIVIINPLGAKKICRLTFEQIKVIYQEVKTHFENYRIIFTGLPQDLLTIPILEIETLPFDEFIYTVALTKYSDFVISVDTALVHIAAAYHKPTLAFYPNSRTPEYPSHLIWSPNHHKSIQIVSPTYTVKDIDTETLTNSVKRLSCIDKK", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011854" + ], + [ + "gene_synonym", + "ECK3614" + ], + [ + "gene_synonym", + "EcoGene:EG11426" + ], + [ + "gene_synonym", + "GI:16131495" + ], + [ + "gene_synonym", + "GeneID:948146" + ], + [ + "gene_synonym", + "JW3599" + ], + [ + "gene_synonym", + "NP_418081.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27241" + ], + [ + "gene_synonym", + "b3624" + ], + [ + "gene_synonym", + "rfaZ" + ], + [ + "gene_synonym", + "waaZ" + ] + ], + "dna_sequence": "ATGAAGAATATTAGATACATTGACAAAAAAGATGTTGAAAACCTGATTGAAAATAAAATATCTGATGATGTTATTATTTTTCTTTCGGGCCCTACATCGCAAAAAACACCTTTGTCAGTATTACGAACAAAGGATATTATTGCTGTCAATGGTTCTGCGCAATATCTGTTAAGTAATAATATCGTTCCTTTTATATATGTACTTACAGATGTCCGATTTTTACATCAGCGTCGTGATGATTTTTATAAATTTAGCCAGAGAAGTCGTTATACCATAGTAAACGTTGACGTTTATGAACACGCTTCCAAAGAAGATAAACTTTATATCCTCCAGAACTGCCTCGTATTACGGTCCTTTTACCGTCGGGAAAAAGGTGGTTTTATAAAGAAGATTAAATTTAATATTTTGAGACAGATTCACAAAGAACTGCTGATCTCTGTACCGTTGTCTAAAAAAGGTCGTCTGGTTGGATTTTGCAAGGACATTAGTCTTGGTTATTGCTCATGCCATACTATTGCCTTTGCTGCAATTCAAATCGCATATTCACTTAAGTATGCGCGGATTATTTGTTCTGGTCTTGATTTAACGGGTAGCTGTTCTCGTTTCTATGATGAGAATAAAAATCCCATGCCCTCGGAATTAAGTAGGGATTTATTCAAAATATTGCCATTTTTTCGTTTTATGCATGATAATGTAAAAGATATTAATATTTATAATTTATCAGATGATACAGCTATTTCTTACGATGTAATTCCATTTATTAAACTTCAAGACATCAGTGCAGAAGAATCAAAAGATATGACAAGAAAAAAAATGCAATATAGAACTTCAACCGATTCTTATGCTAATTAA", + "dna_sequence_length": 852, + "functions": [ + "lipopolysaccharide KdoIII transferase", + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3571", + "location": [ + [ + "NC_000913", + 3800196, + "-", + 852 + ] + ], + "md5": "b529b0d8d4bdb7113a538436f7f7c79a", + "parent_gene": "", + "protein_md5": "8ecc5c70e58b0824fc6a89679d6774cf", + "protein_translation": "MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011856" + ], + [ + "gene_synonym", + "ECK3615" + ], + [ + "gene_synonym", + "EcoGene:EG11425" + ], + [ + "gene_synonym", + "GI:16131496" + ], + [ + "gene_synonym", + "GeneID:948145" + ], + [ + "gene_synonym", + "JW3600" + ], + [ + "gene_synonym", + "NP_418082.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27240" + ], + [ + "gene_synonym", + "b3625" + ], + [ + "gene_synonym", + "rfaY" + ], + [ + "gene_synonym", + "waaY" + ] + ], + "dna_sequence": "ATGATTCAGAAGAGCAAGATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATGACTTCTTGTCTTATAATATAAATATCATCAAGGTTTTTCGTTCTATTGATGATACAAAAGTTATGCTTATTGATACCGATTACGGTAAATTGATTCTTAAGGTTTTTTCTCCGAAAGTTAAGCGTAACGAACGTTTCTTTAAGTCTCTGTTAAAAGGTGATTATTACGAACGCCTTTTTGAGCAAACCCAAAAAGTACGAAATGAAGGGTTAAATACACTCAATGACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGATGGCATAGAGTTGTGTGATATGCCCGATATTGATGATGCGCTAAAAAATAAAATTCAGCAATCAATTAATGCCTTACATCAACATGGCATGGTTTCTGGCGACCCCCATCGTGGTAACTTCATTATAAAAAATGGTGAGGTTCGAATTATCGATCTCTCCGGAAAGCGTGCTTCAGCGCAGCGTAAAGCGAAAGATCGTATTGACTTAGAGCGTCATTACGGTATTAAAAATGAGATTAGAGATCTAGGCTATTATCTTTTAGTATATCGTAAAAAAATGCGCAATTTTATGCGGCGTTTGAAAGGGAAACCAGCGCGCTAA", + "dna_sequence_length": 699, + "functions": [ + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3572", + "location": [ + [ + "NC_000913", + 3800965, + "-", + 699 + ] + ], + "md5": "25719ec2d92e5dae0a81a834cf1d78d3", + "parent_gene": "", + "protein_md5": "11985a3d246f43ca04a18adbe64c7d7a", + "protein_translation": "MIQKSKIKDLVVFTDENNSKYLNVLNDFLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNFMRRLKGKPAR", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011858" + ], + [ + "gene_synonym", + "ECK3616" + ], + [ + "gene_synonym", + "EcoGene:EG11353" + ], + [ + "gene_synonym", + "GI:16131497" + ], + [ + "gene_synonym", + "GeneID:948142" + ], + [ + "gene_synonym", + "JW3601" + ], + [ + "gene_synonym", + "NP_418083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27129" + ], + [ + "gene_synonym", + "b3626" + ], + [ + "gene_synonym", + "rfaJ" + ], + [ + "gene_synonym", + "rfaN" + ], + [ + "gene_synonym", + "waaJ" + ], + [ + "gene_synonym", + "waaR" + ] + ], + "dna_sequence": "GTGGACTCATTTCCTGCCATAGAGATAGATAAAGTTAAAGCCTGGGATTTTCGGCTAGCTAATATAAATACTTCTGAATGTTTAAATGTTGCCTATGGTGTCGATGCTAATTATCTTGATGGTGTAGGTGTTTCCATCACATCAATTGTCCTAAATAATCGACATATTAATCTTGATTTTTATATTATTGCTGATGTTTATAATGATGGTTTTTTTCAAAAAATTGCAAAGCTTGCAGAGCAAAACCAATTAAGAATCACGTTATATAGAATTAACACTGATAAGCTCCAGTGCTTGCCTTGTACACAGGTCTGGTCAAGAGCAATGTACTTCCGTTTATTTGCATTTCAATTATTGGGTTTAACGCTTGATCGTTTGCTTTATCTTGATGCAGATGTTGTTTGTAAAGGCGATATTAGCCAACTATTACATCTGGGTTTAAATGGAGCGGTTGCTGCTGTTGTTAAAGATGTTGAGCCAATGCAAGAAAAGGCGGTATCCAGGTTGTCTGATCCTGAATTACTTGGGCAGTACTTTAATTCCGGTGTCGTTTATTTAGACTTAAAAAAATGGGCTGACGCAAAACTAACAGAAAAAGCGTTGTCTATTCTTATGAGTAAAGATAATGTTTATAAATACCCTGATCAGGATGTTATGAATGTCTTACTGAAAGGGATGACATTATTTTTGCCTCGTGAGTACAATACAATTTATACAATTAAAAGTGAATTAAAAGACAAAACACATCAAAACTATAAAAAGCTGATTACAGAAAGTACTCTTCTTATTCATTATACAGGTGCAACTAAACCGTGGCACAAATGGGCAATTTATCCATCGGTAAAATACTATAAAATAGCTTTAGAAAATTCCCCCTGGAAAGATGACTCTCCACGAGATGCGAAATCAATTATTGAATTTAAAAAAAGATATAAACATCTTTTAGTGCAACATCATTATATCTCAGGAATTATAGCAGGAGTCTGTTATCTTTGCCGAAAATATTACCGTAAATAA", + "dna_sequence_length": 1017, + "functions": [ + "lipopolysaccharide 1,2-glucosyltransferase", + "UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase" + ], + "id": "CDS_3573", + "location": [ + [ + "NC_000913", + 3801999, + "-", + 1017 + ] + ], + "md5": "2ce5a5b0343df0912bf1afcfb3cb97f8", + "parent_gene": "", + "protein_md5": "9c3cb14e49d97c36a43a3815806503bc", + "protein_translation": "MDSFPAIEIDKVKAWDFRLANINTSECLNVAYGVDANYLDGVGVSITSIVLNNRHINLDFYIIADVYNDGFFQKIAKLAEQNQLRITLYRINTDKLQCLPCTQVWSRAMYFRLFAFQLLGLTLDRLLYLDADVVCKGDISQLLHLGLNGAVAAVVKDVEPMQEKAVSRLSDPELLGQYFNSGVVYLDLKKWADAKLTEKALSILMSKDNVYKYPDQDVMNVLLKGMTLFLPREYNTIYTIKSELKDKTHQNYKKLITESTLLIHYTGATKPWHKWAIYPSVKYYKIALENSPWKDDSPRDAKSIIEFKKRYKHLLVQHHYISGIIAGVCYLCRKYYRK", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011860" + ], + [ + "gene_synonym", + "ECK3617" + ], + [ + "gene_synonym", + "EcoGene:EG11352" + ], + [ + "gene_synonym", + "GI:16131498" + ], + [ + "gene_synonym", + "GeneID:948143" + ], + [ + "gene_synonym", + "JW3602" + ], + [ + "gene_synonym", + "NP_418084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27128" + ], + [ + "gene_synonym", + "b3627" + ], + [ + "gene_synonym", + "rfaI" + ], + [ + "gene_synonym", + "rfaM" + ], + [ + "gene_synonym", + "waaI" + ], + [ + "gene_synonym", + "waaO" + ] + ], + "dna_sequence": "ATGCAGCAGGTGTTTTTCCAGGAAACTGAGTTTCTTAATTCAGTTATTGATTATGATCATAAAGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTGGTTGCGGAATTTCGATTGCTTCAATATTAAAATATAATGAAGGAAGTCGATTGTGTTTCCATATTTTTACTGATTATTTTGGTGATGATGATCGTAAGTATTTTGATGCCCTGGCGTTGCAGTATAAAACCAGAATTAAAATATATCTGATTAATGGTGATCGACTGCGCTCATTGCCTAGCACTAAGAATTGGACTCATGCAATATATTTTCGTTTTGTTATTGCAGATTACTTTATTAATAAGGCGCCTAAAGTCCTTTATCTGGATGCAGATATCATTTGTCAGGGGACTATTGAGCCACTAATTAATTTCTCATTTCCTGACGATAAAGTCGCAATGGTTGTTACAGAAGGGCAAGCTGACTGGTGGGAAAAACGCGCCCATTCGTTAGGTGTTGCGGGAATTGCTAAAGGTTACTTTAACTCCGGTTTTTTATTGATTAATACTGCCCAATGGGCGGCTCAGCAGGTTTCTGCACGAGCTATTGCAATGCTAAATGAGCCAGAAATAATCAAAAAAATAACACATCCTGATCAGGATGTGTTAAATATGTTGCTGGCGGATAAACTTATTTTCGCTGATATTAAATATAACACCCAGTTCAGCTTAAATTATCAACTCAAAGAAAGCTTTATAAACCCAGTAACCAACGATACTATTTTTATCCATTATATCGGGCCAACCAAGCCCTGGCATGATTGGGCCTGGGATTATCCTGTATCACAAGCCTTTATGGAGGCAAAAAATGCTTCGCCATGGAAGAATACGGCGTTGCTGAAACCGAACAATAGCAATCAATTAAGATATAGCGCAAAACATATGCTTAAAAAGCATAGATATCTAAAAGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAA", + "dna_sequence_length": 1020, + "functions": [ + "UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase" + ], + "id": "CDS_3574", + "location": [ + [ + "NC_000913", + 3803058, + "-", + 1020 + ] + ], + "md5": "b02cbe077596f5626d29e42dd7e6da29", + "parent_gene": "", + "protein_md5": "af9a3a3b8c616d6e1929a36575937325", + "protein_translation": "MQQVFFQETEFLNSVIDYDHKVETENLCLDIAYGTDKNFLFGCGISIASILKYNEGSRLCFHIFTDYFGDDDRKYFDALALQYKTRIKIYLINGDRLRSLPSTKNWTHAIYFRFVIADYFINKAPKVLYLDADIICQGTIEPLINFSFPDDKVAMVVTEGQADWWEKRAHSLGVAGIAKGYFNSGFLLINTAQWAAQQVSARAIAMLNEPEIIKKITHPDQDVLNMLLADKLIFADIKYNTQFSLNYQLKESFINPVTNDTIFIHYIGPTKPWHDWAWDYPVSQAFMEAKNASPWKNTALLKPNNSNQLRYSAKHMLKKHRYLKGFSNYLFYFIEKIKH", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011862" + ], + [ + "gene_synonym", + "ECK3618" + ], + [ + "gene_synonym", + "EcoGene:EG11351" + ], + [ + "gene_synonym", + "GI:226524757" + ], + [ + "gene_synonym", + "GeneID:948144" + ], + [ + "gene_synonym", + "JW3603" + ], + [ + "gene_synonym", + "NP_418085.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27127" + ], + [ + "gene_synonym", + "b3628" + ], + [ + "gene_synonym", + "lps" + ], + [ + "gene_synonym", + "phx*" + ], + [ + "gene_synonym", + "rfaB" + ], + [ + "gene_synonym", + "syn*" + ], + [ + "gene_synonym", + "waaB" + ] + ], + "dna_sequence": "ATGAAAATAGCGTTTATCGGCGAAGCTGTTTCTGGATTTGGCGGCATGGAAACTGTCATCCGTGATGTTATTACTACCTTCAGGCAACAACATATCCAAAGTGAAATGTTTTTCTTTTGTCGTAATGACAAAATGGATAAGGGATGGCTGGAAGGTATTAAATACTCATGTTCATTTTCCAATATTCGTTTAGGTTTTTTGCGTCGGGCGAAACATATTCATGCTCTAAGTAAATGGCTTCAGGAGTACCAACCAGATATCGTTATTTGTATTGATGTGATCTCCTGCCTGTTTGCCGCAAAAGCACGTAAAAAATCAGGAATTGATATGCCAGTATTTTCATGGCCACATTTTTCTTTAGATCACAAAAAACATGCTGAATATATCACCTGTGCCGACTATCATTTAGCAATCAGCTCTGGCATTAAACAGCAAATGATTAATCGAGGTGTAGCAGAATCGACGATAAATGTTATTTTTAATCCCGTCGAAACTAAAGACTCAGTCATTCCCGCGCCCGAGGAAGGTGAAACGGCAACGTTTATTTATGTTGGGCGTATGAAATTTGAAGGCCAGAAAAGAGTTAAAGACCTGCTTGATGGCTTATCACAAGCGAAAGGTAACTGGAAACTCCATGTATTGGGTGATGGCTCCGATTTCGAAAAATGCCAGGCTTATGGTAGAGAATTAAATATTGATGATCGAATTGTCTGGTATGGTTGGCAACAATATCCCTGGGAATTGGTCCAGCAAGATATTGAAAAAGTGAGTGCGTTATTGCTCACGTCATCTTTTGAAGGTTTCCCAATGACCCTACTTGAAGCCTTGTCGTGGGGGATTCCTTGTATCAGTGCCGATTGTGTCTCCGGGCCTGCTGACATTATTCAACCTGATGTCAATGGCCATCTGTATCAACCGGGAGATATTGCTGGTTTTGTAACTCTTCTAAATAAATATATAGCAGGTGAAATTCATATCGAACATGAAAAAATTCCTGCGTCGATCGATGAATTTTACCAATCGAAGTATTACGATAGATTACATAAGGTAATTATTTCTGCTATTTCCCGGAGGAAATAA", + "dna_sequence_length": 1080, + "functions": [ + "lipopolysaccharide 1,6-galactosyltransferase", + "UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase" + ], + "id": "CDS_3575", + "location": [ + [ + "NC_000913", + 3804137, + "-", + 1080 + ] + ], + "md5": "0eea0eb816eaf72d3cf1174467f27390", + "parent_gene": "", + "protein_md5": "11369b91dbae38e8c7c6eea7a7b4121e", + "protein_translation": "MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011864" + ], + [ + "gene_synonym", + "ECK3619" + ], + [ + "gene_synonym", + "EcoGene:EG11350" + ], + [ + "gene_synonym", + "GI:16131500" + ], + [ + "gene_synonym", + "GeneID:948151" + ], + [ + "gene_synonym", + "JW3604" + ], + [ + "gene_synonym", + "NP_418086.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27126" + ], + [ + "gene_synonym", + "b3629" + ], + [ + "gene_synonym", + "rfaS" + ], + [ + "gene_synonym", + "waaS" + ] + ], + "dna_sequence": "ATGACTATTTATTTTATAAATTGGGTTGCAGATTATGAATTAAAAATGATTCAGTACCTGAAAAAAAAGTACAAGATAAAAAATATAACAACACCAAAAAAATATAACTGGATTAATAAAAAAATATCAAAAATAGGGATGGATAATGCATGGCTGGGGCGATTATTCATCAAGCATTACCTCAATGATATTAAAAAAGATGACATAATTATCATTAATGACAGTGTTGTTAATAAAGGTATCAATAAACAAATATTAAAAAATATTAACTGTCATAAAGTTTTGCTTCTAAGAAATACTGTTGGCGAAGATTTTATTCTTGATAACGCGAATTATTTCGATATTATATATGATTTTGAGCATAGATTTATAGGGAATGAAAAGATCAAGGCAATAGAACAATTTTTTCCTATAGGAATGGATGAAATTAGAAATTATAGTTTATCTGACAAAAATAACAGCCAGCCAATATGTTTTTTCCTTGGTCGTGATAAAGGGCGTCTTCAAATAATTAATGAGTTAGCCGAGAGATTAACAACACTAGGATGTAAGCTAGATTTTAATGTTGTCAAAGATAAGACATCATCTACGACTTCAAAGTATTTGATTGAAAAACAAATATCTTATGAAGAGAATATTAGAAGAACATTAAATGCTAATATAATTGTTGATATAACCAAAGAAAACCAATCTGGCTGGACTCTTCGTATACTTGAGGCACTATTTTTCAATAAAAAATTAATTACTAATAATATAAATGTATTTGGTTCAGAAATCTATAGTGAATCTCGCTTTTTTATAATAGGTCATGATGATTGGGATAAGTTAGAGTATTTTATTAACTCATCTGTTAAACCAATGGATTATGATAGTTTATATAAATTCAGTCCAGATAAAATGATGTCAACGATTGTTTCTGATTTTATAGACAAATAA", + "dna_sequence_length": 936, + "functions": [ + "lipopolysaccharide rhamnose:KdoIII transferase", + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3576", + "location": [ + [ + "NC_000913", + 3805116, + "-", + 936 + ] + ], + "md5": "8d5a292697a0db3ddcb7e1815ed1148e", + "parent_gene": "", + "protein_md5": "144003c1c98ec31b8db4e4303efb5bb5", + "protein_translation": "MTIYFINWVADYELKMIQYLKKKYKIKNITTPKKYNWINKKISKIGMDNAWLGRLFIKHYLNDIKKDDIIIINDSVVNKGINKQILKNINCHKVLLLRNTVGEDFILDNANYFDIIYDFEHRFIGNEKIKAIEQFFPIGMDEIRNYSLSDKNNSQPICFFLGRDKGRLQIINELAERLTTLGCKLDFNVVKDKTSSTTSKYLIEKQISYEENIRRTLNANIIVDITKENQSGWTLRILEALFFNKKLITNNINVFGSEIYSESRFFIIGHDDWDKLEYFINSSVKPMDYDSLYKFSPDKMMSTIVSDFIDK", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011866" + ], + [ + "gene_synonym", + "ECK3620" + ], + [ + "gene_synonym", + "EcoGene:EG11340" + ], + [ + "gene_synonym", + "GI:16131501" + ], + [ + "gene_synonym", + "GeneID:948150" + ], + [ + "gene_synonym", + "JW3605" + ], + [ + "gene_synonym", + "NP_418087.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25741" + ], + [ + "gene_synonym", + "b3630" + ], + [ + "gene_synonym", + "rfaP" + ], + [ + "gene_synonym", + "waaP" + ] + ], + "dna_sequence": "ATGGTTGAATTAAAAGAGCCGCTTGCCACACTTTGGCGTGGTAAAGATGCTTTTGCAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGCTTTGAACTGTCCGGGAAAAGCTATTTTCTTAAATGGCACAAGGGGACGACATTAAAAGAGATTATAAAAAATCTACTCTCATTGCGGATGCCCGTTTTGGGCGCAGACAGAGAGTGGCACGCTATTCATCGCCTGAGTGATGTTGGCGTTGATACAATGAAGGGCATTGGGTTTGGCGAAAAAGGGTTAAATCCATTAACTCGCGCATCATTTATTATTACCGAAGATCTCACTCCCACAATTAGCCTTGAAGATTATTGTGCCGATTGGGCAGTCAACCCGCCTGATATACGTGTTAAGCGTATGCTGATCGCACGTGTAGCAACTATGGTGCGTAAAATGCATACTGCAGGGATAAATCACCGCGACTGTTACATTTGCCACTTTTTGCTTCATTTGCCATTTACTGGCCGGGAAGATGAATTAAAAATTTCAGTTATCGATCTGCATCGGGCACAGATACGTGCAAAAGTACCGCGCCGCTGGCGCGATAAAGACCTGATTGGTTTATATTTCTCATCAATGAATATTGGCCTGACGCAAAGAGATATCTGGCGATTTATGAAGGTTTATTTTGGGATGCCTTTACGCAAAATATTGTCTCTTGAACAGAATTTATTGAACATGGCAAGCGTTAAGGCCGAGCGTATTAAAGAGCGAACACAACGCAAAGGATTATAA", + "dna_sequence_length": 798, + "functions": [ + "kinase that phosphorylates core heptose of lipopolysaccharide" + ], + "id": "CDS_3577", + "location": [ + [ + "NC_000913", + 3805950, + "-", + 798 + ] + ], + "md5": "b8f989554d953e48c90391fc5bf2a15a", + "parent_gene": "", + "protein_md5": "d81661e1b38bb1dd15d6ed2325b21225", + "protein_translation": "MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILSLEQNLLNMASVKAERIKERTQRKGL", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011868" + ], + [ + "gene_synonym", + "ECK3621" + ], + [ + "gene_synonym", + "EcoGene:EG11339" + ], + [ + "gene_synonym", + "GI:16131502" + ], + [ + "gene_synonym", + "GeneID:948149" + ], + [ + "gene_synonym", + "JW3606" + ], + [ + "gene_synonym", + "NP_418088.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25740" + ], + [ + "gene_synonym", + "b3631" + ], + [ + "gene_synonym", + "rfaG" + ], + [ + "gene_synonym", + "waaG" + ] + ], + "dna_sequence": "ATGATCGTGGCGTTTTGTTTATATAAATATTTTCCATTTGGTGGGCTTCAACGTGACTTTATGCGCATTGCATCAACAGTTGCCGCACGGGGCCACCATGTTCGGGTATATACACAGTCGTGGGAAGGCGATTGCCCGAAAGCATTTGAGCTTATTCAGGTGCCAGTTAAGTCCCATACCAACCATGGACGCAATGCAGAATATTATGCCTGGGTACAAAATCATCTCAAAGAGCATCCCGCAGATCGCGTTGTTGGGTTTAATAAGATGCCTGGCCTGGATGTTTATTTTGCCGCTGATGTTTGTTACGCCGAGAAAGTTGCGCAAGAAAAAGGTTTTTTATATCGTTTAACATCACGATATCGCCATTATGCCGCATTTGAGCGAGCGACTTTCGAGCAGGGTAAATCGACGAAACTTATGATGCTGACCGATAAGCAAATCGCCGATTTCCAGAAGCATTATCAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACAGTGAGCAAATCCCAAACAGCCGTGAAATTTATCGCCAGAAAAATGGCATAAAAGAGCAACAAAACTTATTACTGCAGGTTGGATCAGATTTTGGCCGTAAAGGTGTAGATCGCTCAATTGAAGCTTTGGCATCGTTACCGGAATCATTACGTCACAATACGCTTTTATTTGTTGTTGGTCAGGATAAGCCGCGAAAATTTGAAGCGCTGGCAGAAAAACTCGGCGTGCGGAGCAATGTGCATTTCTTCTCCGGTCGCAATGATGTGTCAGAATTAATGGCAGCCGCTGATTTATTACTGCATCCCGCTTATCAGGAAGCCGCGGGTATCGTTCTTCTAGAAGCGATCACTGCTGGGTTACCTGTTTTAACAACAGCGGTATGTGGGTACGCGCATTATATTGCGGATGCCAATTGTGGAACGGTCATCGCTGAACCTTTCTCTCAGGAACAATTAAATGAAGTTTTACGTAAAGCGTTAACTCAGTCGCCATTGCGAATGGCCTGGGCGGAGAATGCTCGCCATTATGCCGATACTCAGGATTTGTATAGCTTGCCAGAAAAAGCCGCGGATATCATTACAGGTGGTTTAGATGGTTGA", + "dna_sequence_length": 1125, + "functions": [ + "UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase", + "lipopolysaccharide core biosynthesis protein", + "lipopolysaccharide glucosyltransferase I" + ], + "id": "CDS_3578", + "location": [ + [ + "NC_000913", + 3807067, + "-", + 1125 + ] + ], + "md5": "133ed6afd9007068bbda3580f9b08787", + "parent_gene": "", + "protein_md5": "d5cbc44eff39aec46a54237c7b272acb", + "protein_translation": "MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGGLDG", + "protein_translation_length": 374, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011870" + ], + [ + "gene_synonym", + "ECK3622" + ], + [ + "gene_synonym", + "EcoGene:EG11341" + ], + [ + "gene_synonym", + "GI:16131503" + ], + [ + "gene_synonym", + "GeneID:948155" + ], + [ + "gene_synonym", + "JW3607" + ], + [ + "gene_synonym", + "NP_418089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25742" + ], + [ + "gene_synonym", + "b3632" + ], + [ + "gene_synonym", + "rfaQ" + ], + [ + "gene_synonym", + "waaQ" + ] + ], + "dna_sequence": "ATGCGATATCATGGGGATATGTTATTAACTACTCCTGTCATCAGTACGCTCAAGCAGAATTATCCTGATGCAAAAATCGATATGCTGCTTTATCAGGACACCATCCCTATTTTGTCTGAAAACCCGGAAATTAATGCGCTCTATGGGATAAGCAATAAAGGTGCGGGAACTTTCGATAAAATTAAAAATGTGCTTTCGTTGATAAAAACTCTGCGTGCGAATAATTATGACCTGGTCATTAATCTTACGGATCAGTGGATGGTGGCGCTGCTGGTACGTTGTTTACCTGCACGGATGAAAATATCGCAACTTTATGGTCATCGGCAGCATGGTATTTGGAAAAAAAGCTTCACACACTTAGCGCCAATACACGGTACACATATTGTTGAGCGTAATTTATCGGTCCTTGAGCCATTAGGTATTACCGATTTCTACACCGACACAACAATGAGTTACGCCGAAGATTGCTGGAAGAAGATGCGCCGGGAATTAGATGCCCTGGGCGTAAAAGATCATTATGTTGTCATCCAACCGACAGCGCGTCAGATATTTAAGTGTTGGGATAACGATAAATTTTCTAAGGTTATCGATGCGCTGCAACAGCGAGGCTATCAGGTTGTGCTAACCTGTGGGCCCTCGGCAGATGATCTCGCTTGTGTAGATGAGATTGCACGAGGTTGCGAAACAAAACCCATTACTGGCCTTGCAGGTAAAACACGTTTTCCTGAACTGGGTGCATTAATTGATCATGCAGTGCTTTTTATTGGTGTGGATTCTGCGCCGGGACATATTGCAGCGGCAGTGAAAACGCCAGTCATTAGTCTATTTGGTGCAACGGATCACGTATTCTGGCGTCCCTGGACCGAGAATATTATTCAATTCTGGGCGGGGAATTATCAGAAAATGCCGACCCGGCATGAACTTGACCGCAACAAAAAATATCTTTCTGTTATCCCAGCGGAGGATGTGATCGCCGCTACGGAAAAGCTGTTGCCAGAAGATGCCCCTTCAGCTGACAGGAATGCACAATTATGA", + "dna_sequence_length": 1035, + "functions": [ + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3579", + "location": [ + [ + "NC_000913", + 3808098, + "-", + 1035 + ] + ], + "md5": "5d96e541d526f051fb8d8e9763309c7a", + "parent_gene": "", + "protein_md5": "37389646f4417ac84698e411a3555977", + "protein_translation": "MRYHGDMLLTTPVISTLKQNYPDAKIDMLLYQDTIPILSENPEINALYGISNKGAGTFDKIKNVLSLIKTLRANNYDLVINLTDQWMVALLVRCLPARMKISQLYGHRQHGIWKKSFTHLAPIHGTHIVERNLSVLEPLGITDFYTDTTMSYAEDCWKKMRRELDALGVKDHYVVIQPTARQIFKCWDNDKFSKVIDALQQRGYQVVLTCGPSADDLACVDEIARGCETKPITGLAGKTRFPELGALIDHAVLFIGVDSAPGHIAAAVKTPVISLFGATDHVFWRPWTENIIQFWAGNYQKMPTRHELDRNKKYLSVIPAEDVIAATEKLLPEDAPSADRNAQL", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011873" + ], + [ + "gene_synonym", + "ECK3623" + ], + [ + "gene_synonym", + "EcoGene:EG10520" + ], + [ + "gene_synonym", + "GI:16131504" + ], + [ + "gene_synonym", + "GeneID:949048" + ], + [ + "gene_synonym", + "JW3608" + ], + [ + "gene_synonym", + "NP_418090.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC75" + ], + [ + "gene_synonym", + "b3633" + ], + [ + "gene_synonym", + "kdtA" + ], + [ + "gene_synonym", + "waaA" + ] + ], + "dna_sequence": "ATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCGGCATTATGCTGCACTCCGTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTGGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCACGTTTTGTGGCGCTGGGCGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTACAGCAATTCCCGAATTTATTGCTCATCCTGGTACCCCGTCATCCGGAACGCTTCCCGGATGCGATTAACCTTGTCCGCCAGGCTGGACTAAGCTATATCACACGCTCTTCAGGGGAAGTCCCCTCCACCAGCACGCAGGTTGTGGTTGGCGATACGATGGGCGAGTTGATGTTACTGTATGGCATTGCCGATCTCGCCTTTGTTGGCGGTTCACTGGTTGAACGTGGTGGGCATAATCCGCTGGAAGCTGCCGCACACGCTATTCCGGTATTGATGGGGCCGCATACTTTTAACTTTAAAGACATTTGCGCGCGGCTGGAGCAGGCAAGCGGGCTGATTACCGTTACCGATGCCACTACGCTTGCAAAAGAGGTTTCCTCTTTACTCACCGACGCCGATTACCGTAGTTTCTATGGCCGTCATGCCGTTGAAGTACTGTATCAAAACCAGGGCGCGCTACAGCGTCTGCTTCAACTGCTGGAACCTTACCTGCCACCGAAAACGCATTGA", + "dna_sequence_length": 1278, + "functions": [ + "3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)" + ], + "id": "CDS_3580", + "location": [ + [ + "NC_000913", + 3808540, + "+", + 1278 + ] + ], + "md5": "e95bd5dbf28582e8ce6313c0101ac022", + "parent_gene": "", + "protein_md5": "dd6481bef3d12aad924e892d84a04e7f", + "protein_translation": "MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH", + "protein_translation_length": 425, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011875" + ], + [ + "gene_synonym", + "ECK3624" + ], + [ + "gene_synonym", + "EcoGene:EG11190" + ], + [ + "gene_synonym", + "GI:16131505" + ], + [ + "gene_synonym", + "GeneID:947386" + ], + [ + "gene_synonym", + "JW3609" + ], + [ + "gene_synonym", + "NP_418091.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6I6" + ], + [ + "gene_synonym", + "b3634" + ], + [ + "gene_synonym", + "coaD" + ], + [ + "gene_synonym", + "kdtB" + ], + [ + "gene_synonym", + "yicA" + ] + ], + "dna_sequence": "ATGCAAAAACGGGCGATTTATCCGGGTACTTTCGATCCCATTACCAATGGTCATATCGATATCGTGACGCGCGCCACGCAGATGTTCGATCACGTTATTCTGGCGATTGCCGCCAGCCCCAGTAAAAAACCGATGTTTACCCTGGAAGAGCGTGTGGCACTGGCACAGCAGGCAACCGCGCATCTGGGGAACGTGGAAGTGGTCGGGTTTAGTGATTTAATGGCGAACTTCGCCCGTAATCAACACGCTACGGTGCTGATTCGTGGCCTGCGTGCGGTGGCAGATTTTGAATATGAAATGCAGCTGGCGCATATGAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAG", + "dna_sequence_length": 480, + "functions": [ + "pantetheine-phosphate adenylyltransferase" + ], + "id": "CDS_3581", + "location": [ + [ + "NC_000913", + 3809825, + "+", + 480 + ] + ], + "md5": "d7013f6d657bcecbfe471eb2c17a2f15", + "parent_gene": "", + "protein_md5": "8e1971e3a4b5e90c16262507a38f99e8", + "protein_translation": "MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011877" + ], + [ + "gene_synonym", + "ECK3625" + ], + [ + "gene_synonym", + "EcoGene:EG10329" + ], + [ + "gene_synonym", + "GI:16131506" + ], + [ + "gene_synonym", + "GeneID:946765" + ], + [ + "gene_synonym", + "JW3610" + ], + [ + "gene_synonym", + "NP_418092.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05523" + ], + [ + "gene_synonym", + "b3635" + ], + [ + "gene_synonym", + "fpg" + ], + [ + "gene_synonym", + "mutM" + ] + ], + "dna_sequence": "ATGCCTGAATTACCCGAAGTTGAAACCAGCCGCCGCGGCATAGAACCGCATCTCGTTGGTGCAACCATTCTTCATGCAGTGGTGCGCAACGGACGCTTGCGCTGGCCGGTTTCAGAAGAGATCTACCGTTTAAGCGACCAACCAGTGCTTAGCGTGCAGCGGCGGGCTAAATATCTGCTGCTGGAGCTGCCTGAGGGCTGGATTATCATTCATTTAGGGATGTCTGGCAGCCTGCGCATCCTTCCAGAAGAACTTCCCCCTGAAAAGCATGACCATGTGGATTTGGTGATGAGCAACGGCAAAGTGCTGCGCTACACCGATCCGCGCCGCTTTGGTGCCTGGCTGTGGACCAAAGAGCTGGAAGGGCATAATGTGCTGACCCATCTTGGACCGGAGCCGCTTAGCGACGATTTCAATGGTGAGTATCTGCATCAGAAGTGCGCGAAGAAAAAAACGGCGATTAAACCGTGGCTGATGGATAACAAGCTGGTGGTAGGGGTAGGGAATATCTATGCCAGCGAATCACTGTTTGCGGCGGGGATCCATCCGGATCGGCTGGCGTCATCACTGTCGCTGGCAGAGTGTGAATTGTTAGCTCGGGTGATTAAAGCGGTGTTGCTGCGTTCGATTGAGCAGGGTGGTACAACGCTGAAAGATTTTCTGCAAAGTGATGGTAAACCGGGCTATTTCGCTCAGGAATTGCAGGTTTACGGGCGAAAAGGTGAGCCGTGTCGGGTGTGCGGTACGCCGATTGTGGCGACTAAACATGCGCAGCGGGCAACGTTTTATTGTCGGCAGTGCCAGAAGTAA", + "dna_sequence_length": 810, + "functions": [ + "formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase" + ], + "id": "CDS_3582", + "location": [ + [ + "NC_000913", + 3811152, + "-", + 810 + ] + ], + "md5": "645b1c1a75e8dd75ecd0fc7481f59cbf", + "parent_gene": "", + "protein_md5": "b2bfeb000b2a24507f3b227728727ebf", + "protein_translation": "MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011883" + ], + [ + "gene_synonym", + "ECK3626" + ], + [ + "gene_synonym", + "EcoGene:EG10891" + ], + [ + "gene_synonym", + "GI:16131507" + ], + [ + "gene_synonym", + "GeneID:946318" + ], + [ + "gene_synonym", + "JW3611" + ], + [ + "gene_synonym", + "NP_418093.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7N9" + ], + [ + "gene_synonym", + "b3636" + ], + [ + "gene_synonym", + "rpmG" + ] + ], + "dna_sequence": "ATGGCTAAAGGTATTCGTGAGAAAATCAAGCTGGTTTCTTCTGCTGGTACTGGTCACTTCTATACCACTACGAAGAACAAACGTACTAAGCCGGAAAAACTGGAACTGAAAAAATTCGATCCAGTTGTTCGCCAGCACGTGATCTACAAAGAAGCGAAAATCAAATAA", + "dna_sequence_length": 168, + "functions": [ + "50S ribosomal subunit protein L33" + ], + "id": "CDS_3583", + "location": [ + [ + "NC_000913", + 3811417, + "-", + 168 + ] + ], + "md5": "2f877183b0fe732ed4242bc2e69e2de3", + "parent_gene": "", + "protein_md5": "527e433349d66445e6c1224986f9ef24", + "protein_translation": "MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK", + "protein_translation_length": 55, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011885" + ], + [ + "gene_synonym", + "ECK3627" + ], + [ + "gene_synonym", + "EcoGene:EG10886" + ], + [ + "gene_synonym", + "GI:16131508" + ], + [ + "gene_synonym", + "GeneID:946941" + ], + [ + "gene_synonym", + "JW3612" + ], + [ + "gene_synonym", + "NP_418094.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7M2" + ], + [ + "gene_synonym", + "b3637" + ], + [ + "gene_synonym", + "rpmB" + ] + ], + "dna_sequence": "ATGTCCCGAGTCTGCCAAGTTACTGGCAAGCGTCCGGTGACCGGTAACAACCGTTCCCACGCACTGAACGCGACTAAACGCCGTTTCCTGCCGAACCTGCACTCTCACCGTTTCTGGGTTGAGAGCGAGAAGCGTTTTGTCACCCTGCGCGTATCTGCTAAAGGTATGCGTGTAATCGATAAAAAAGGCATCGATACAGTTCTGGCTGAACTGCGTGCCCGTGGCGAAAAGTACTAA", + "dna_sequence_length": 237, + "functions": [ + "50S ribosomal subunit protein L28" + ], + "id": "CDS_3584", + "location": [ + [ + "NC_000913", + 3811674, + "-", + 237 + ] + ], + "md5": "628e438020c46a820794a17c2b4350d0", + "parent_gene": "", + "protein_md5": "79ee4cfd255906487645a5993f85b1d1", + "protein_translation": "MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011889" + ], + [ + "gene_synonym", + "ECK3628" + ], + [ + "gene_synonym", + "EcoGene:EG11312" + ], + [ + "gene_synonym", + "GI:162135914" + ], + [ + "gene_synonym", + "GeneID:948968" + ], + [ + "gene_synonym", + "JW5643" + ], + [ + "gene_synonym", + "NP_418095.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25531" + ], + [ + "gene_synonym", + "b3638" + ], + [ + "gene_synonym", + "radC" + ], + [ + "gene_synonym", + "yicR" + ] + ], + "dna_sequence": "GTGAAAAACAATTCACAGCTGTTGATGCCGCGCGAAAAAATGCTGAAGTTTGGTATTAGCGCCTTAACGGATGTCGAGCTGCTGGCGCTATTTCTGCGTACCGGAACGCGCGGTAAAGATGTATTAACCCTGGCAAAAGAGATGCTGGAGAATTTCGGCTCTCTTTATGGCTTGTTAACCTCTGAATATGAACAATTTAGTGGCGTTCATGGAATTGGCGTGGCGAAATTTGCCCAGTTAAAGGGGATTGCTGAACTGGCGCGGCGTTACTACAACGTGCGGATGCGTGAAGAAAGCCCTTTACTCAGCCCGGAGATGACGAGGGAATTTTTACAAAGCCAGCTCACGGGTGAGGAGCGGGAGATCTTTATGGTGATCTTTCTCGACTCCCAACACCGGGTTATAACGCATAGGCGTCTTTTTTCCGGCACGCTAAACCATGTTGAAGTCCATCCTCGGGAAATTATCCGCGAAGCGATAAAAATAAACGCCTCGGCGCTGATCCTTGCACATAATCACCCTTCGGGTTGTGCTGAACCCAGTAAAGCGGATAAACTCATTACTGAACGGATAATAAAGAGTTGTCAGTTCATGGATTTACGCGTGCTCGACCATATCGTGATTGGGCGTGGAGAGTATGTTTCTTTTGCCGAACGCGGCTGGATTTAA", + "dna_sequence_length": 669, + "functions": [ + "UPF0758 family protein" + ], + "id": "CDS_3585", + "location": [ + [ + "NC_000913", + 3812559, + "-", + 669 + ] + ], + "md5": "2018344e375bd8635c2574697938816c", + "parent_gene": "", + "protein_md5": "6107f1bd6a2a80989b9837f57677afec", + "protein_translation": "MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011896" + ], + [ + "gene_synonym", + "ECK3629" + ], + [ + "gene_synonym", + "EcoGene:EG10004" + ], + [ + "gene_synonym", + "GI:90111624" + ], + [ + "gene_synonym", + "GeneID:949047" + ], + [ + "gene_synonym", + "JW5642" + ], + [ + "gene_synonym", + "NP_418096.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABQ0" + ], + [ + "gene_synonym", + "b3639" + ], + [ + "gene_synonym", + "coaBC" + ], + [ + "gene_synonym", + "dfp" + ] + ], + "dna_sequence": "ATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGCAGGCGGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGAATGACCTGGTATCGACGATTTGTCTGGCTACACCTGCGCCTGTAGCCGTGCTCCCCGCCATGAACCAGCAGATGTACCGTGCCGCTGCCACGCAGCATAATTTAGAGGTGCTTGCTTCCCGTGGTTTGCTCATCTGGGGGCCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTGGATATGGCGGTAGCGCATTTTTCGCCCGTCAACGACCTGAAACATCTGAACATTATGATTACCGCCGGCCCGACGCGTGAACCGCTCGATCCGGTGCGTTATATCTCTAATCACAGCTCCGGCAAGATGGGTTTTGCTATCGCCGCCGCCGCTGCCCGTCGTGGCGCGAACGTCACGCTGGTATCAGGTCCGGTTTCACTACCGACGCCACCGTTTGTTAAACGTGTTGATGTGATGACCGCGCTGGAAATGGAAGCCGCCGTGAATGCTTCTGTACAGCAGCAAAATATTTTTATCGGCTGCGCCGCCGTGGCGGATTATCGCGCAGCTACCGTGGCCCCAGAGAAAATCAAAAAGCAGGCCACGCAGGGTGATGAATTAACAATAAAAATGGTTAAAAACCCCGATATCGTCGCAGGCGTTGCCGCACTAAAAGACCATCGACCCTACGTCGTTGGATTTGCCGCCGAAACAAATAATGTGGAAGAATACGCCCGGCAAAAACGTATCCGTAAAAACCTTGATCTGATCTGCGCGAACGATGTTTCCCAGCCAACTCAAGGATTTAACAGCGACAACAACGCATTACACCTTTTCTGGCAGGACGGAGATAAAGTCTTACCGCTTGAGCGCAAAGAGCTCCTTGGCCAATTATTACTCGACGAGATCGTGACCCGTTATGATGAAAAAAATCGACGTTAA", + "dna_sequence_length": 1221, + "functions": [ + "fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding" + ], + "id": "CDS_3586", + "location": [ + [ + "NC_000913", + 3812731, + "+", + 1221 + ] + ], + "md5": "20c591e278afe68b0e44738f29406b37", + "parent_gene": "", + "protein_md5": "2931cc9d77f9b98049ada7f809299e11", + "protein_translation": "MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR", + "protein_translation_length": 406, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011899" + ], + [ + "gene_synonym", + "ECK3630" + ], + [ + "gene_synonym", + "EcoGene:EG10251" + ], + [ + "gene_synonym", + "GI:16131511" + ], + [ + "gene_synonym", + "GeneID:948607" + ], + [ + "gene_synonym", + "JW3615" + ], + [ + "gene_synonym", + "NP_418097.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06968" + ], + [ + "gene_synonym", + "b3640" + ], + [ + "gene_synonym", + "dnaS" + ], + [ + "gene_synonym", + "dut" + ], + [ + "gene_synonym", + "sof" + ] + ], + "dna_sequence": "ATGAAAAAAATCGACGTTAAGATTCTGGACCCGCGCGTTGGGAAGGAATTTCCGCTCCCGACTTATGCCACCTCTGGCTCTGCCGGACTTGACCTGCGTGCCTGTCTCAACGACGCCGTAGAACTGGCTCCGGGTGACACTACGCTGGTTCCGACCGGGCTGGCGATTCATATTGCCGATCCTTCACTGGCGGCAATGATGCTGCCGCGCTCCGGATTGGGACATAAGCACGGTATCGTGCTTGGTAACCTGGTAGGATTGATCGATTCTGACTATCAGGGCCAGTTGATGATTTCCGTGTGGAACCGTGGTCAGGACAGCTTCACCATTCAACCTGGCGAACGCATCGCCCAGATGATTTTTGTTCCGGTAGTACAGGCTGAATTTAATCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAA", + "dna_sequence_length": 456, + "functions": [ + "deoxyuridinetriphosphatase" + ], + "id": "CDS_3587", + "location": [ + [ + "NC_000913", + 3813932, + "+", + 456 + ] + ], + "md5": "52a74073c281af1bc10ad559b760c0fb", + "parent_gene": "", + "protein_md5": "10a0f74c8ecc10a44f42d060baed0b77", + "protein_translation": "MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ", + "protein_translation_length": 151, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011902" + ], + [ + "gene_synonym", + "ECK3631" + ], + [ + "gene_synonym", + "EcoGene:EG11191" + ], + [ + "gene_synonym", + "GI:90111625" + ], + [ + "gene_synonym", + "GeneID:948158" + ], + [ + "gene_synonym", + "JW5641" + ], + [ + "gene_synonym", + "NP_418098.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C093" + ], + [ + "gene_synonym", + "b3641" + ], + [ + "gene_synonym", + "slmA" + ], + [ + "gene_synonym", + "ttk" + ], + [ + "gene_synonym", + "yicB" + ] + ], + "dna_sequence": "ATGGCAGAAAAACAAACTGCGAAAAGGAACCGTCGCGAGGAAATACTTCAGTCTCTGGCGCTGATGCTGGAATCCAGCGATGGAAGCCAACGTATCACGACGGCAAAACTGGCCGCCTCTGTCGGCGTTTCCGAAGCGGCACTGTATCGCCACTTCCCCAGTAAGACCCGCATGTTCGATAGCCTGATTGAGTTTATCGAAGATAGCCTGATTACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGCCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAATTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCACAGTTGCAGTAA", + "dna_sequence_length": 597, + "functions": [ + "nucleoid occlusion factor, anti-FtsZ division inhibitor" + ], + "id": "CDS_3588", + "location": [ + [ + "NC_000913", + 3814494, + "+", + 597 + ] + ], + "md5": "c8f3b253ec6419398a34a700214e44e4", + "parent_gene": "", + "protein_md5": "103142c372162775cb3f2bc874806e02", + "protein_translation": "MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011904" + ], + [ + "gene_synonym", + "ECK3632" + ], + [ + "gene_synonym", + "EcoGene:EG10808" + ], + [ + "gene_synonym", + "GI:16131513" + ], + [ + "gene_synonym", + "GeneID:948157" + ], + [ + "gene_synonym", + "JW3617" + ], + [ + "gene_synonym", + "NP_418099.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E3" + ], + [ + "gene_synonym", + "b3642" + ], + [ + "gene_synonym", + "pyrE" + ] + ], + "dna_sequence": "ATGAAACCATATCAGCGCCAGTTTATTGAATTTGCGCTTAGCAAGCAGGTGTTAAAGTTTGGCGAGTTTACGCTGAAATCCGGGCGCAAAAGCCCCTATTTCTTCAACGCCGGGCTGTTTAATACCGGGCGCGATCTGGCACTGTTAGGCCGTTTTTACGCTGAAGCGTTGGTGGATTCCGGCATTGAGTTCGATCTGCTGTTTGGCCCTGCTTACAAAGGGATCCCGATTGCCACCACAACCGCTGTGGCACTGGCGGAGCATCACGACCTGGACCTGCCGTACTGCTTTAACCGCAAAGAAGCAAAAGACCACGGTGAAGGCGGCAATCTGGTTGGTAGCGCGTTACAAGGACGCGTAATGCTGGTAGATGATGTGATCACCGCCGGAACGGCGATTCGCGAGTCGATGGAGATTATTCAGGCCAATGGCGCGACGCTTGCTGGCGTGTTGATTTCGCTCGATCGTCAGGAACGCGGGCGCGGCGAGATTTCGGCGATTCAGGAAGTTGAGCGTGATTACAACTGCAAAGTGATCTCTATCATCACCCTGAAAGACCTGATTGCTTACCTGGAAGAGAAGCCGGAAATGGCGGAACATCTGGCGGCGGTTAAGGCCTATCGCGAAGAGTTTGGCGTTTAA", + "dna_sequence_length": 642, + "functions": [ + "orotate phosphoribosyltransferase" + ], + "id": "CDS_3589", + "location": [ + [ + "NC_000913", + 3815768, + "-", + 642 + ] + ], + "md5": "7c43bf3c94a677a65d34b6fbbf1296b7", + "parent_gene": "", + "protein_md5": "2c13089ccc8ac8947d75994bef52960e", + "protein_translation": "MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011909" + ], + [ + "gene_synonym", + "ECK3633" + ], + [ + "gene_synonym", + "EcoGene:EG10863" + ], + [ + "gene_synonym", + "GeneID:948156" + ], + [ + "gene_synonym", + "JW3618" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CG19" + ], + [ + "gene_synonym", + "b3643" + ], + [ + "gene_synonym", + "orfE" + ], + [ + "gene_synonym", + "rph" + ] + ], + "dna_sequence": "ATGCGTCCAGCAGGCCGTAGCAATAATCAGGTGCGTCCCGTTACCCTGACTCGTAACTATACAAAACATGCAGAAGGCTCGGTGCTGGTCGAATTTGGCGATACCAAAGTGTTGTGTACCGCCTCTATTGAAGAAGGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCATGCTGCCACGTTCTACCCACACCCGTAACGCTCGTGAAGCGGCGAAAGGTAAGCAGGGTGGACGCACAATGGAAATCCAGCGTCTGATCGCCCGTGCTCTTCGCGCGGCAGTAGATTTGAAAGCGCTGGGTGAGTTCACCATTACGCTGGACTGCGACGTGCTTCAGGCTGATGGTGGCACGCGTACCGCGTCGATTACGGGTGCCTGCGTGGCGCTGGTAGATGCGCTACAGAAGCTGGTGGAAAACGGCAAGCTGAAAACCAATCCGATGAAAGGGATGGTAGCCGCAGTTTCTGTCGGAATTGTGAACGGCGAAGCGGTTTGCGATCTGGAATACGTTGAAGACTCTGCCGCAGAGACCGACATGAACGTAGTGATGACCGAAGACGGGCGCATCATTGAAGTGCAGGGGACGGCAGAAGGCGAGCCGTTCACCCATGAAGAGCTACTCATCTTGTTGGCTCTGGCCCGAGGGGGAATCGAATCCATTGTAGCGACGCAGAAGGCGGCGCTGGCAAACTGA", + "dna_sequence_length": 717, + "id": "CDS_3590", + "location": [ + [ + "NC_000913", + 3816549, + "-", + 669 + ], + [ + "NC_000913", + 3815881, + "-", + 48 + ] + ], + "md5": "fd773addd7698448ea4d5c9a2863dcff", + "parent_gene": "", + "protein_md5": "d919dde298c1e7122071e92d07448352", + "protein_translation": "MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGTRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLILLALARGGIESIVATQKAALAN", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011913" + ], + [ + "gene_synonym", + "ECK3634" + ], + [ + "gene_synonym", + "EcoGene:EG11192" + ], + [ + "gene_synonym", + "GI:16131515" + ], + [ + "gene_synonym", + "GeneID:948154" + ], + [ + "gene_synonym", + "JW3619" + ], + [ + "gene_synonym", + "NP_418101.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23839" + ], + [ + "gene_synonym", + "b3644" + ], + [ + "gene_synonym", + "orfX" + ], + [ + "gene_synonym", + "yicC" + ] + ], + "dna_sequence": "ATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGCTCGGTAAACCAGCGTTATCTGGAAACTTACTTTCGTCTGCCGGAGCAGTTCCGTAGCCTTGAACCTGTCGTTCGCGAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCGCAAGGTGAGCTGATCCTCAACGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTAAAAATGCAGAGTGACGAAGGGGAAATCAACCCGGTTGATATTCTACGCTGGCCGGGCGTGATGGCAGCCCAGGAGCAGGATCTTGACGCCATTGCCGCTGAAATTCTCGCGGCGCTGGATGGTACGCTGGACGACTTTATTGTCGCGCGCGAAACCGAAGGTCAGGCACTGAAAGCATTGATCGAGCAGCGTCTGGAAGGCGTCACCGCCGAAGTGGTCAAAGTCCGCTCCCATATGCCGGAAATCCTGCAATGGCAGCGTGAGCGTCTGGTCGCGAAGCTGGAAGATGCTCAGGTGCAACTGGAAAACAACCGTCTGGAGCAGGAACTGGTTCTGCTGGCACAACGAATTGACGTTGCCGAAGAACTGGATCGCCTCGAAGCGCATGTCAAAGAGACCTACAACATTCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAA", + "dna_sequence_length": 864, + "functions": [ + "UPF0701 family protein" + ], + "id": "CDS_3591", + "location": [ + [ + "NC_000913", + 3816676, + "+", + 864 + ] + ], + "md5": "e3e928b75d7278f5423080e1ea47f25f", + "parent_gene": "", + "protein_md5": "10ad4b48fceee46064d5710b2cf281c5", + "protein_translation": "MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRSHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011918" + ], + [ + "gene_synonym", + "ECK3635" + ], + [ + "gene_synonym", + "EcoGene:EG11193" + ], + [ + "gene_synonym", + "GI:90111626" + ], + [ + "gene_synonym", + "GeneID:948153" + ], + [ + "gene_synonym", + "JW3620" + ], + [ + "gene_synonym", + "NP_418102.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23840" + ], + [ + "gene_synonym", + "b3645" + ], + [ + "gene_synonym", + "dinD" + ], + [ + "gene_synonym", + "orfY" + ], + [ + "gene_synonym", + "pcsA" + ], + [ + "gene_synonym", + "yicD" + ] + ], + "dna_sequence": "ATGAACGAACATCATCAACCTTTTGAAGAGATAAAACTGATTAATGCAAACGGAGCAGAACAATGGTCAGCAAGACAACTTGGGAAACTACTGGGTTATTCAGAGTATCGTCACTTTATACCTGTATTAACGCGCGCCAAAGAAGCCTGTGAGAACAGTGGTCACACAATTGATGACCATTTCGAGGAGATCCTCGATATGGTCAAAATTGGCTCAAATGCCAAAAGAGCATTAAAAGACATCGTACTCTCCCGCTATGCCTGTTACCTGGTAGTACAAAACGGCGACCCTGCGAAACCGGTCATTGCGGCAGGGCAGACTTATTTTGCTATCCAGACCCGACGGCAGGAGCTTGCTGACGATGAAGCATTTAAGCAACTTCGTGAAGACGAAAAGCGTCTGTTTCTGAGAAATGAGTTGAAAGAACATAACAAACAATTGGTTGAGGCAGCACAGCAAGCTGGGGTAGCGACAGCTACTGATTTCGCCATATTTCAGAATCATGGTTACCAGGGGCTGTATGGTGGATTAGATCAGAAAGCTATTCATCAGCGGAAGGGGCTGAAAAAGAATCAGAAGATCCTGGATCATATGGGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCATCAAGCAGTTGGAAAACAGTGTAAAAATTACAGAGAAGAAATAG", + "dna_sequence_length": 825, + "functions": [ + "DNA damage-inducible protein" + ], + "id": "CDS_3592", + "location": [ + [ + "NC_000913", + 3817760, + "+", + 825 + ] + ], + "md5": "c9149be218e6a000a26d93b179f924a4", + "parent_gene": "", + "protein_md5": "48a464c75fdda7178a0dfb7ffd2d4f65", + "protein_translation": "MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011921" + ], + [ + "gene_synonym", + "ECK3636" + ], + [ + "gene_synonym", + "EcoGene:EG11683" + ], + [ + "gene_synonym", + "GI:90111627" + ], + [ + "gene_synonym", + "GeneID:948165" + ], + [ + "gene_synonym", + "JW3621" + ], + [ + "gene_synonym", + "NP_418103.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM2" + ], + [ + "gene_synonym", + "b3646" + ], + [ + "gene_synonym", + "yicG" + ] + ], + "dna_sequence": "ATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTCTGCTGGGCCACTATCCGCTCGGCTGGGTCAAACACCCGGAATATGTGATTATCGTCGCTACCGCCGCAGTACTCACCACTATCGTTGCTCCTGTAATGCCTTACCTGCGCAAAGTGTTTCTGGTGCTCGATGCGCTCGGACTGGTGGTCTTTTCTATCATCGGGGCACAGGTTGCACTGGATATGGGGCACGGCCCAATTATTGCCGTTGTCGCGGCGGTAACCACCGGCGTGTTTGGCGGCGTTTTGCGCGATATGTTCTGTAAACGTATCCCACTGGTATTCCAGAAAGAGTTGTATGCCGGTGTCTCATTTGCCTCCGCCGTGCTGTACATCGCGCTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAA", + "dna_sequence_length": 618, + "functions": [ + "UPF0126 family inner membrane protein" + ], + "id": "CDS_3593", + "location": [ + [ + "NC_000913", + 3818874, + "+", + 618 + ] + ], + "md5": "6fb4c9c35fd7f8a0a405bc7fb336a933", + "parent_gene": "", + "protein_md5": "65fb447cec3050795b513dd9a2f962e2", + "protein_translation": "MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011923" + ], + [ + "gene_synonym", + "ECK3637" + ], + [ + "gene_synonym", + "EcoGene:EG11334" + ], + [ + "gene_synonym", + "GI:90111628" + ], + [ + "gene_synonym", + "GeneID:948164" + ], + [ + "gene_synonym", + "JW3622" + ], + [ + "gene_synonym", + "NP_418104.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25772" + ], + [ + "gene_synonym", + "b3647" + ], + [ + "gene_synonym", + "ligB" + ], + [ + "gene_synonym", + "yicF" + ] + ], + "dna_sequence": "ATGAAAGTATGGATGGCGATATTAATAGGTATCTTGTGCTGGCAATCATCTGTGTGGGCGGTCTGTCCGGCCTGGTCGCCAGCCAGAGCACAGGAAGAAATTTCCCGCCTGCAACAGCAAATAAAACAGTGGGACGATGACTACTGGAAGGAAGGAAAAAGTGAGGTGGAAGACGGTGTTTACGATCAGTTAAGCGCCCGTCTTACGCAGTGGCAACGCTGCTTTGGGAGCGAGCCCCGCGACGTGATGATGCCGCCTTTAAATGGTGCGGTTATGCATCCGGTTGCCCATACGGGTGTACGCAAAATGGTGGATAAAAACGCATTAAGTCTGTGGATGCGAGAACGTAGCGATCTTTGGGTGCAGCCAAAAGTTGATGGCGTTGCGGTAACCCTGGTTTATCGGGACGGGAAACTGAACAAAGCAATCAGTCGCGGTAATGGCCTGAAAGGCGAGGACTGGACGCAGAAAGTTAGCTTAATTTCCGCTGTGCCGCAAACCGTTAGCGGGCCTTTAGCCAACAGTACGCTTCAGGGGGAAATATTTCTCCAGCGCGAGGGGCATATCCAACAACAAATGGGGGGAATAAATGCCCGCGCAAAAGTTGCTGGCTTGATGATGCGCCAGGACGATAGCGACACGCTGAATTCTCTGGGCGTTTTTGTCTGGGCATGGCCGGATGGACCGCAGTTAATGTCTGATCGTTTAAAAGAGCTGGCTACCGCAGGTTTTACTCTAACGCAGACGTATACCCGTGCGGTGAAAAATGCTGATGAAGTTGCGCGCGTACGCAATGAGTGGTGGAAAGCGGAATTACCCTTCGTCACCGATGGCGTAGTTGTACGAGCGGCGAAAGAGCCAGAATCCCGCCATTGGCTACCGGGCCAGGCAGAGTGGCTGGTGGCCTGGAAATATCAACCTGTAGCTCAGGTTGCCGAAGTGAAGGCAATTCAGTTTGCGGTGGGTAAGAGCGGTAAAATATCGGTGGTTGCGTCACTCGCACCTGTCATGCTGGATGATAAAAAAGTCCAGCGGGTGAATATTGGTTCCGTCAGGCGCTGGCAGGAGTGGGATATTGCGCCTGGTGATCAGATTCTCGTCAGCCTTGCCGGTCAGGGTATTCCTCGCATTGATGATGTGGTGTGGCGCGGTGCAGAACGTACAAAACCGACACCGCCAGAAAACCGCTTTAACTCGTTGACCTGCTACTTTGCTTCTGATGTTTGTCAGGAACAGTTCATTTCACGCTTAGTCTGGCTGGGGGCAAAACAGGTTCTTGGGCTGGATGGCATTGGTGAGGCCGGTTGGCGCGCGCTGCATCAGACTCATCGCTTTGAACATATCTTTTCCTGGCTTTTATTAACGCCAGAGCAATTACAGAACACGCCGGGGATCGCGAAAAGTAAAAGTGCGCAGCTATGGCATCAGTTTAATCTGGCTCGTAAGCAGCCTTTTACTCGCTGGGTGATGGCAATGGGAATACCGCTAACCCGGGCGGCGCTTAATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGCAGATCACAGGTTTTGAACCTTAG", + "dna_sequence_length": 1683, + "functions": [ + "DNA ligase, NAD(+)-dependent" + ], + "id": "CDS_3594", + "location": [ + [ + "NC_000913", + 3821170, + "-", + 1683 + ] + ], + "md5": "e96badde33248b1d1be68b8a972138f0", + "parent_gene": "", + "protein_md5": "cce2618bcee96562c964ed9b740fb9fa", + "protein_translation": "MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP", + "protein_translation_length": 560, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011930" + ], + [ + "gene_synonym", + "ECK3638" + ], + [ + "gene_synonym", + "EcoGene:EG10965" + ], + [ + "gene_synonym", + "GI:16131519" + ], + [ + "gene_synonym", + "GeneID:948163" + ], + [ + "gene_synonym", + "JW3623" + ], + [ + "gene_synonym", + "NP_418105.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60546" + ], + [ + "gene_synonym", + "b3648" + ], + [ + "gene_synonym", + "gmk" + ], + [ + "gene_synonym", + "spoR" + ] + ], + "dna_sequence": "ATGGCTCAAGGCACGCTTTATATTGTTTCTGCCCCCAGTGGCGCGGGTAAATCCAGCCTGATTCAGGCTTTATTAAAAACCCAACCGTTGTATGACACCCAGGTTTCTGTTTCACACACCACACGCCAACCGCGTCCTGGTGAAGTCCACGGTGAACATTATTTCTTTGTTAATCATGATGAATTTAAAGAAATGATTAGCAGAGATGCGTTCCTCGAACACGCAGAAGTTTTTGGTAATTACTATGGCACTTCGCGTGAGGCCATTGAGCAAGTACTGGCGACCGGTGTCGATGTTTTTCTCGATATCGACTGGCAGGGCGCGCAGCAAATTCGCCAGAAGATGCCGCACGCGCGGAGTATCTTTATTTTACCGCCGTCCAAAATTGAACTGGACCGCCGTCTACGCGGTCGCGGTCAGGACAGCGAAGAGGTCATTGCAAAGCGTATGGCGCAAGCTGTTGCAGAAATGAGCCATTACGCCGAATATGATTATCTGATTGTGAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCCGAACGTCTGCGCATGAGCCGCCAAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTTGGCAGACTGA", + "dna_sequence_length": 624, + "functions": [ + "guanylate kinase" + ], + "id": "CDS_3595", + "location": [ + [ + "NC_000913", + 3821428, + "+", + 624 + ] + ], + "md5": "6f0bdd852497044d5b3a5b45a7bdd7f7", + "parent_gene": "", + "protein_md5": "00a2e230767a7aebb667ea11577dad4b", + "protein_translation": "MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011933" + ], + [ + "gene_synonym", + "ECK3639" + ], + [ + "gene_synonym", + "EcoGene:EG10899" + ], + [ + "gene_synonym", + "GI:16131520" + ], + [ + "gene_synonym", + "GeneID:948160" + ], + [ + "gene_synonym", + "JW3624" + ], + [ + "gene_synonym", + "NP_418106.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A800" + ], + [ + "gene_synonym", + "b3649" + ], + [ + "gene_synonym", + "rpoZ" + ], + [ + "gene_synonym", + "spoS" + ] + ], + "dna_sequence": "ATGGCACGCGTAACTGTTCAGGACGCTGTAGAGAAAATTGGTAACCGTTTTGACCTGGTACTGGTCGCCGCGCGTCGCGCTCGTCAGATGCAGGTAGGCGGAAAGGATCCGCTGGTACCGGAAGAAAACGATAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAA", + "dna_sequence_length": 276, + "functions": [ + "RNA polymerase, omega subunit" + ], + "id": "CDS_3596", + "location": [ + [ + "NC_000913", + 3822106, + "+", + 276 + ] + ], + "md5": "cf177e580672bab71e898337f4cb2549", + "parent_gene": "", + "protein_md5": "4181cf83cf26ea2fecc18adef347d76c", + "protein_translation": "MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011935" + ], + [ + "gene_synonym", + "ECK3640" + ], + [ + "gene_synonym", + "EcoGene:EG10966" + ], + [ + "gene_synonym", + "GI:16131521" + ], + [ + "gene_synonym", + "GeneID:948159" + ], + [ + "gene_synonym", + "JW3625" + ], + [ + "gene_synonym", + "NP_418107.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG24" + ], + [ + "gene_synonym", + "b3650" + ], + [ + "gene_synonym", + "spoT" + ] + ], + "dna_sequence": "TTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATGGCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGGTAGTTCGTTTGAATTTATCGAGAGCGTTAAATCCGATCTCTTCCCGGATGAGATTTACGTTTTCACACCGGAAGGGCGCATTGTCGAGCTGCCTGCCGGTGCAACGCCCGTCGACTTCGCTTATGCAGTGCATACCGATATCGGTCATGCCTGCGTGGGCGCACGCGTTGACCGCCAGCCTTACCCGCTGTCGCAGCCGCTTACCAGCGGTCAAACCGTTGAAATCATTACCGCTCCGGGCGCTCGCCCGAATGCCGCTTGGCTGAACTTTGTCGTTAGCTCGAAAGCGCGCGCCAAAATTCGTCAGTTGCTGAAAAACCTCAAGCGTGATGATTCTGTAAGCCTGGGCCGTCGTCTGCTCAACCATGCTTTGGGTGGTAGCCGTAAGCTGAATGAAATCCCGCAGGAAAATATTCAGCGCGAGCTGGATCGCATGAAGCTGGCAACGCTTGACGATCTGCTGGCAGAAATCGGACTTGGTAACGCAATGAGCGTGGTGGTCGCGAAAAATCTGCAACATGGGGACGCCTCCATTCCACCGGCAACCCAAAGCCACGGACATCTGCCCATTAAAGGTGCCGATGGCGTGCTGATCACCTTTGCGAAATGCTGCCGCCCTATTCCTGGCGACCCGATTATCGCCCACGTCAGCCCCGGTAAAGGTCTGGTGATCCACCATGAATCCTGCCGTAATATCCGTGGCTACCAGAAAGAGCCAGAGAAGTTTATGGCTGTGGAATGGGATAAAGAGACGGCGCAGGAGTTCATCACCGAAATCAAGGTGGAGATGTTCAATCATCAGGGTGCGCTGGCAAACCTGACGGCGGCAATTAACACCACGACTTCGAATATTCAAAGTTTGAATACGGAAGAGAAAGATGGTCGCGTCTACAGCGCCTTTATTCGTCTGACCGCTCGTGACCGTGTGCATCTGGCGAATATCATGCGCAAAATCCGCGTGATGCCAGACGTGATTAAAGTCACCCGAAACCGAAATTAA", + "dna_sequence_length": 2109, + "functions": [ + "bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase" + ], + "id": "CDS_3597", + "location": [ + [ + "NC_000913", + 3822400, + "+", + 2109 + ] + ], + "md5": "292e09f84bf79469882264762a7ebd5f", + "parent_gene": "", + "protein_md5": "f94417311ccd06512cc8ecfa521bbbe6", + "protein_translation": "MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN", + "protein_translation_length": 702, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011937" + ], + [ + "gene_synonym", + "ECK3641" + ], + [ + "gene_synonym", + "EcoGene:EG10967" + ], + [ + "gene_synonym", + "GI:16131522" + ], + [ + "gene_synonym", + "GeneID:948161" + ], + [ + "gene_synonym", + "JW3626" + ], + [ + "gene_synonym", + "NP_418108.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGJ2" + ], + [ + "gene_synonym", + "b3651" + ], + [ + "gene_synonym", + "spoU" + ], + [ + "gene_synonym", + "trmH" + ] + ], + "dna_sequence": "ATGAACCCAACACGTTATGCACGCATCTGCGAAATGCTCGCCAGGCGGCAGCCTGATCTGACCGTCTGCATGGAGCAGGTCCACAAACCTCATAACGTTTCTGCGATTATTCGTACCGCAGATGCCGTTGGCGTACATGAAGTTCACGCCGTCTGGCCTGGTAGCCGCATGCGCACCATGGCTTCGGCAGCGGCGGGTAGTAACAGCTGGGTACAGGTGAAAACACACCGCACCATTGGCGATGCCGTCGCTCATCTCAAAGGCCAGGGCATGCAGATTCTGGCAACCCATCTTTCTGATAACGCTGTCGATTTCCGCGAAATTGATTACACTCGCCCGACCTGCATTTTGATGGGACAGGAGAAAACGGGCATCACGCAGGAAGCATTGGCCCTGGCGGATCAGGACATCATCATTCCGATGATCGGCATGGTGCAGTCGCTGAATGTTTCCGTTGCCTCAGCCCTCATTCTTTACGAAGCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTATCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAA", + "dna_sequence_length": 690, + "functions": [ + "tRNA mG18-2'-O-methyltransferase, SAM-dependent" + ], + "id": "CDS_3598", + "location": [ + [ + "NC_000913", + 3824515, + "+", + 690 + ] + ], + "md5": "c1133a91f29edc50cb2d82a40a112644", + "parent_gene": "", + "protein_md5": "4adc569f0aefe88b64aeed76bccea176", + "protein_translation": "MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011939" + ], + [ + "gene_synonym", + "ECK3642" + ], + [ + "gene_synonym", + "EcoGene:EG10829" + ], + [ + "gene_synonym", + "GI:16131523" + ], + [ + "gene_synonym", + "GeneID:948162" + ], + [ + "gene_synonym", + "JW3627" + ], + [ + "gene_synonym", + "NP_418109.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24230" + ], + [ + "gene_synonym", + "b3652" + ], + [ + "gene_synonym", + "radC" + ], + [ + "gene_synonym", + "recG" + ], + [ + "gene_synonym", + "spoV" + ] + ], + "dna_sequence": "ATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCGCAGCACTTAGTAACAAACTGGCGAAAATCAACCTGCATACCGTGCAGGATCTACTCTTACACCTTCCCCTGCGCTACGAAGATCGCACCCATCTCTACCCCATCGGAGAACTACTGCCGGGCGTTTATGCCACGGTGGAAGGCGAAGTGCTGAACTGCAATATCTCCTTCGGCGGTCGGCGGATGATGACCTGCCAGATCAGCGACGGTTCCGGCATCCTCACCATGCGCTTTTTCAATTTCAGCGCGGCAATGAAAAATAGCCTGGCGGCGGGCCGCCGTGTACTGGCTTATGGCGAAGCAAAGCGCGGTAAATATGGTGCGGAGATGATCCACCCGGAATACCGCGTGCAGGGCGATCTCAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACTTTGCACCGCCCGCCACCGACGCTACAGCTTAGCGATCTGGAAACCGGGCAGCATCCGGCGCAACGTCGTCTGATTCTGGAAGAACTGCTGGCGCACAACCTCAGCATGTTAGCCTTACGTGCCGGAGCACAGCGTTTTCATGCCCAGCCGCTGAGCGCCAATGACACGCTGAAAAATAAACTCCTCGCCGCCTTACCGTTCAAGCCAACGGGCGCACAGGCACGCGTAGTGGCGGAGATCGAGCGCGATATGGCGCTGGATGTGCCGATGATGCGTCTGGTGCAGGGCGATGTAGGTTCCGGTAAAACGCTGGTCGCCGCCCTCGCCGCGTTGCGTGCGATTGCCCACGGCAAACAGGTAGCATTGATGGCACCAACCGAATTACTCGCCGAGCAGCACGCCAATAACTTCCGCAACTGGTTTGCACCGCTCGGTATCGAAGTGGGCTGGCTCGCCGGTAAGCAGAAAGGTAAAGCACGGCTGGCACAGCAGGAAGCCATCGCCAGCGGTCAGGTGCAGATGATTGTCGGTACACACGCCATCTTCCAGGAACAGGTGCAGTTTAACGGCCTGGCGCTGGTGATTATCGACGAACAGCATCGTTTTGGCGTGCATCAGCGTCTGGCATTGTGGGAGAAAGGCCAGCAGCAGGGCTTCCATCCGCATCAGTTGATCATGACCGCCACGCCGATCCCCCGCACGCTGGCAATGACTGCGTATGCCGATCTCGATACCTCGGTGATAGATGAGCTGCCGCCAGGCCGCACGCCAGTGACTACGGTCGCTATTCCTGATACCCGCCGTACCGACATCATTGACCGCGTGCACCACGCCTGCATAACTGAAGGTCGTCAGGCATACTGGGTTTGTACGTTGATTGAAGAGTCGGAATTGCTGGAAGCGCAGGCGGCGGAAGCTACCTGGGAAGAGTTGAAACTGGCGCTACCAGAGTTGAACGTTGGCCTGGTACACGGGCGGATGAAACCTGCCGAGAAACAGGCGGTGATGGCGTCGTTTAAACAAGGTGAGCTACACCTGCTGGTTGCCACAACCGTTATTGAAGTCGGCGTTGATGTGCCTAACGCCAGTCTGATGATTATCGAAAACCCGGAGCGTCTGGGTCTGGCGCAGTTACACCAGCTGCGCGGGCGCGTAGGTCGTGGCGCGGTGGCTTCTCACTGCGTGCTGCTCTACAAAACGCCGCTTTCTAAAACGGCGCAAATTCGCCTGCAAGTGCTGCGCGACAGTAACGACGGTTTTGTGATTGCGCAAAAAGATCTGGAGATTCGCGGCCCTGGCGAATTGTTAGGCACGCGTCAGACGGGTAATGCTGAATTTAAAGTGGCGGATTTACTGCGCGATCAGGCGATGATCCCGGAAGTTCAGCGCCTGGCACGCCATATTCACGAACGTTACCCACAACAGGCAAAAGCCCTGATAGAACGCTGGATGCCGGAGACGGAACGTTACTCGAATGCGTAA", + "dna_sequence_length": 2082, + "functions": [ + "ATP-dependent DNA helicase" + ], + "id": "CDS_3599", + "location": [ + [ + "NC_000913", + 3825210, + "+", + 2082 + ] + ], + "md5": "62b6749a0f5686060ede43d537a5d23f", + "parent_gene": "", + "protein_md5": "011bb79012a0068ffc132a68870f32da", + "protein_translation": "MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAAMKNSLAAGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDTLKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVHHACITEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIERWMPETERYSNA", + "protein_translation_length": 693, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011941" + ], + [ + "gene_synonym", + "ECK3643" + ], + [ + "gene_synonym", + "EcoGene:EG10406" + ], + [ + "gene_synonym", + "GI:16131524" + ], + [ + "gene_synonym", + "GeneID:948166" + ], + [ + "gene_synonym", + "JW3628" + ], + [ + "gene_synonym", + "NP_418110.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER8" + ], + [ + "gene_synonym", + "b3653" + ], + [ + "gene_synonym", + "gltC" + ], + [ + "gene_synonym", + "gltS" + ] + ], + "dna_sequence": "ATGTTTCATCTCGATACTTTAGCAACGCTTGTTGCCGCAACGCTGACGTTGCTGCTCGGGCGTAAGTTGGTCCATTCCGTCTCCTTTTTGAAGAAATACACCATACCGGAACCTGTTGCGGGTGGTTTGTTGGTGGCGCTGGCGCTACTAGTACTGAAAAAAAGCATGGGCTGGGAAGTCAACTTTGATATGTCCCTGCGCGATCCGTTAATGCTGGCTTTCTTCGCCACCATTGGCCTGAACGCCAACATTGCCAGTTTGCGTGCCGGTGGGCGTGTGGTTGGCATCTTCTTGATTGTGGTTGTTGGTCTGTTGGTGATGCAAAATGCCATTGGCATTGGTATGGCTAGCTTGTTAGGGCTTGATCCGCTGATGGGGCTGTTGGCCGGTTCTATTACTCTTTCCGGCGGTCACGGTACGGGCGCTGCGTGGAGTAAATTGTTCATTGAACGTTATGGCTTCACCAATGCGACGGAAGTGGCGATGGCCTGTGCAACGTTCGGTCTGGTGCTGGGCGGCTTGATTGGCGGTCCGGTGGCGCGCTATCTGGTGAAACACTCCACCACGCCGAACGGTATTCCGGATGACCAGGAAGTCCCGACGGCGTTTGAAAAGCCGGATGTGGGACGCATGATCACCTCGTTGGTGCTGATTGAAACTATCGCGCTGATTGCTATCTGCCTGACGGTGGGGAAAATTGTTGCGCAACTTTTGGCTGGCACTGCTTTTGAACTGCCGACCTTCGTCTGTGTACTGTTTGTTGGCGTGATTCTGAGCAACGGTCTGTCAATAATGGGCTTTTACCGCGTCTTTGAGCGTGCGGTATCCGTGCTGGGTAACGTAAGCTTGTCGTTGTTCCTGGCGATGGCGTTGATGGGGCTGAAACTGTGGGAGCTGGCTTCGCTGGCGCTGCCGATGCTGGCGATTCTGGTGGTACAGACCATCTTCATGGCGTTGTATGCCATCTTCGTTACCTGGCGCATGATGGGCAAAAACTACGATGCGGCAGTGCTGGCTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTTGGTGGTGCCGATGGTCGGTGCGTTCTTTATCGATATCGTCAATGCGCTGGTAATTAAGTTGTATTTGATGTTGCCGATTTTTGCCGGTTAA", + "dna_sequence_length": 1206, + "functions": [ + "glutamate transporter" + ], + "id": "CDS_3600", + "location": [ + [ + "NC_000913", + 3828665, + "-", + 1206 + ] + ], + "md5": "16329b7e4a987138512e5e7e2224cdd8", + "parent_gene": "", + "protein_md5": "624a1afab8fd261af2b7b3a7832b27f8", + "protein_translation": "MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVVGLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEVAMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAG", + "protein_translation_length": 401, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011946" + ], + [ + "gene_synonym", + "ECK3644" + ], + [ + "gene_synonym", + "EcoGene:EG11194" + ], + [ + "gene_synonym", + "GI:16131525" + ], + [ + "gene_synonym", + "GeneID:948172" + ], + [ + "gene_synonym", + "JW3629" + ], + [ + "gene_synonym", + "NP_418111.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM9" + ], + [ + "gene_synonym", + "b3654" + ], + [ + "gene_synonym", + "xanP" + ], + [ + "gene_synonym", + "yicE" + ] + ], + "dna_sequence": "ATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTACCGGCACAAGACACGCAACACATTATTAGTATGTCGCTGTTTGCCTCCGGTGTGGCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCTGATTATGGGCGGTACCGCGCTGAAAACCGGTGGTGCTGATGTTCCTACCATGATGGCGGCTTTGTTCGGCACGTTGATGCTGGCAAGTTGCACCGAGATGGTGATCTCCCGCGTTCTGCATCTGGCGCGCCGCATTATTACGCCGCTGGTTTCTGGCGTTGTGGTGATGATTATCGGCCTGTCGCTAATTCAGGTTGGGTTAACGTCCATTGGCGGCGGTTACGCAGCCATGAGCGATAACACCTTCGGCGCACCGAAAAATCTGCTGCTGGCAGGCGTGGTCTTAGCCTTAATTATCCTGCTTAACCGTCAACGTAACCCTTACTTACGCGTGGCCTCACTGGTAATTGCGATGGCGGCCGGATATGCGCTGGCGTGGTTTATGGGCATGTTGCCAGAAAGCAACGAACCTATGACGCAAGAACTGATTATGGTGCCAACGCCGCTCTATTACGGTCTTGGCATTGAATGGAGTCTGCTGCTGCCGCTGATGCTGGTCTTTATGATCACTTCGCTGGAAACCATTGGCGATATCACGGCGACCTCTGACGTTTCCGAACAGCCAGTGTCCGGTCCGCTGTACATGAAACGCCTGAAAGGCGGCGTGCTGGCAAACGGCCTGAACTCGTTTGTTTCGGCGGTGTTTAACACCTTCCCGAACTCCTGCTTCGGGCAAAACAACGGAGTGATCCAGTTGACTGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAA", + "dna_sequence_length": 1392, + "functions": [ + "xanthine permease" + ], + "id": "CDS_3601", + "location": [ + [ + "NC_000913", + 3828945, + "+", + 1392 + ] + ], + "md5": "e997b017415638f1414220e786873124", + "parent_gene": "", + "protein_md5": "3ff4cae3eab8617935adc1d51c352d85", + "protein_translation": "MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNPYLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGITAIVLNLIFPPEKQ", + "protein_translation_length": 463, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011949" + ], + [ + "gene_synonym", + "ECK3645" + ], + [ + "gene_synonym", + "EcoGene:EG11684" + ], + [ + "gene_synonym", + "GI:16131526" + ], + [ + "gene_synonym", + "GeneID:948171" + ], + [ + "gene_synonym", + "JW3630" + ], + [ + "gene_synonym", + "NP_418112.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31433" + ], + [ + "gene_synonym", + "b3655" + ], + [ + "gene_synonym", + "yicH" + ] + ], + "dna_sequence": "ATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGAGCAGAACATATCAGCGCATGGGTTTCCGAGAATAGCGACTATCATCTGGCCTTCGGGGCGATGGATCACCGTTTTTCCGCGCCATCTCATATCGTGCTGGAGAACGTCACGTTTGGTCGTGATGGCCAGCCCGCGACCCTGGTGGCCAAAAGTGTCGACATTGCGCTAAGCAGTCGGCAACTGACCGAACCACGCCATGTCGATACCATCCTGCTGGAAAACGGGACGCTGAATCTCACCGACCAGACCGCGCCGCTACCGTTCAAAGCCGATCGTCTGCAACTGCGTGATATGGCGTTTAATAGCCCGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGGAACTGGCTGCGTGACGGGAAAACGTTGATCCTTGATGATGCGGCAATTGCCGGGCTGGAATATACCTTGCCGAAAAACTGGCAACAGTTGTGGATGGAAACGACACCCGGTTGGTTAAACAGCCTGCAACTGAAGAGATTTAGCGCCAGCCGCAATCTGATCATTGATATCGACCCTGACTTCCCGTGGCAGCTCACCGCGCTCGATGGTTACGGTGCCAACCTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCAGTGTTTCACAAACGCCACAACGTCAGACACATATCAGCCTGAATGGACGCGGTGTGCCGGTGAATATTTTGCAACAGTGGGGATGGCCTGAATTACCGTTGACTGGCGACGGCAATATTCAGCTTACCGCCAGTGGCGATATTCAGGCCAATGTCCCGTTGAAACCTACGGTTAGCGGGCAATTGCATGCCGTGAACGCCGCAAAGCAGCAAGTGACTCAAACCATGAATGCTGGCATCGTTTCCAGCGGTGAAGTTACATCGACGGAGCCGGTGCGGTAA", + "dna_sequence_length": 1710, + "functions": [ + "putative inner membrane-anchored periplasmic AsmA family protein" + ], + "id": "CDS_3602", + "location": [ + [ + "NC_000913", + 3830457, + "+", + 1710 + ] + ], + "md5": "dfc790f7fd5fc89b4c21d80b60f61ac3", + "parent_gene": "", + "protein_md5": "f54b4ac02d6862e1b67a49108a92661b", + "protein_translation": "MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR", + "protein_translation_length": 569, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011951" + ], + [ + "gene_synonym", + "ECK3646" + ], + [ + "gene_synonym", + "EcoGene:EG11685" + ], + [ + "gene_synonym", + "GI:16131527" + ], + [ + "gene_synonym", + "GeneID:948169" + ], + [ + "gene_synonym", + "JW3631" + ], + [ + "gene_synonym", + "NP_418113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31434" + ], + [ + "gene_synonym", + "b3656" + ], + [ + "gene_synonym", + "yicI" + ] + ], + "dna_sequence": "ATGAAAATTAGCGATGGAAACTGGTTGATTCAACCTGGCCTCAATTTGATTCACCCGCTTCAGGTGTTCGAGGTTGAACAGCAGGATAATGAAATGGTGGTCTATGCTGCCCCCCGTGATGTGCGTGAACGTACCTGGCAGCTTGATACGCCTTTATTTACGTTGCGCTTTTTCTCCCCACAGGAAGGTATTGTCGGTGTGCGGATTGAGCATTTTCAGGGGGCGCTGAATAACGGTCCTCATTATCCGCTCAATATTTTGCAGGACGTGAAGGTCACAATCGAAAACACAGAACGTTATGCTGAGTTTAAAAGTGGCAACTTAAGCGCGCGTGTCAGCAAAGGTGAGTTCTGGTCACTGGATTTTCTGCGCAACGGCGAACGTATTACCGGTAGTCAGGTGAAAAATAATGGCTACGTGCAGGACACGAATAATCAACGCAATTATATGTTTGAGCGGCTTGATCTTGGCGTTGGCGAAACAGTTTACGGTCTGGGAGAGCGCTTTACTGCCCTGGTGCGCAATGGCCAGACGGTAGAGACCTGGAACCGGGACGGCGGCACAAGTACTGAACAGGCGTATAAAAATATCCCGTTCTACATGACTAACCGTGGTTATGGGGTACTGGTCAATCATCCCCAGTGTGTCTCTTTTGAAGTGGGATCGGAGAAAGTCTCCAAAGTGCAGTTCAGCGTTGAGAGTGAATATCTCGAATACTTTGTTATCGACGGCCCGACGCCGAAAGCGGTACTTGATCGTTATACCCGCTTTACTGGTCGTCCGGCGCTGCCGCCCGCGTGGTCCTTCGGCCTGTGGCTAACCACTTCATTTACCACCAACTACGACGAAGCGACGGTAAACAGCTTTATCGATGGTATGGCGGAACGCAATCTGCCGCTGCATGTTTTCCACTTTGACTGTTTCTGGATGAAAGCCTTCCAGTGGTGCGATTTTGAGTGGGACCCGCTGACTTTCCCTGACCCGGAAGGGATGATCCGCCGCCTGAAAGCGAAAGGACTGAAAATCTGCGTCTGGATTAACCCCTATATCGGTCAAAAATCCCCCGTCTTTAAAGAGTTACAAGAGAAAGGCTATTTACTCAAACGCCCGGACGGTTCGCTATGGCAGTGGGATAAATGGCAGCCAGGTCTGGCGATTTATGACTTTACCAATCCGGATGCCTGCAAATGGTACGCCGACAAACTGAAAGGTCTGGTCGCGATGGGCGTTGATTGCTTTAAGACCGACTTTGGCGAACGTATCCCAACTGATGTTCAGTGGTTTGACGGTTCCGATCCGCAGAAAATGCATAACCATTATGCGTACATCTACAACGAACTGGTGTGGAACGTGCTCAAGGACACCGTTGGTGAGGAAGAAGCTGTCTTGTTTGCCCGCTCGGCCTCCGTCGGTGCGCAGAAATTCCCGGTACACTGGGGTGGCGATTGTTACGCTAACTACGAATCAATGGCGGAAAGCCTGCGCGGTGGTTTGTCTATTGGCCTTTCAGGTTTTGGCTTCTGGAGCCACGATATCGGCGGCTTTGAAAATACCGCTCCGGCGCACGTTTACAAACGCTGGTGCGCGTTTGGTTTGCTCTCCAGCCATAGCCGTTTACACGGTAGCAAATCTTATCGTGTGCCGTGGGCCTACGATGATGAGTCCTGTGATGTGGTGCGCTTCTTCACGCAACTGAAATGCCGCATGATGCCGTATCTGTATCGTGAAGCTGCGCGTGCGAACGCGCGGGGTACGCCGATGATGCGGGCCATGATGATGGAGTTCCCGGACGATCCGGCTTGTGATTACCTTGACCGTCAATACATGTTAGGCGACAACGTGATGGTTGCGCCGGTGTTCACTGAAGCGGGCGATGTGCAGTTCTACCTGCCGGAAGGTCGCTGGACACACCTGTGGCACAACGATGAACTCGACGGTAGTCGCTGGCATAAACAGCAGCACGGCTTCCTGAGTCTGCCCGTTTATGTGCGTGATAACACTCTACTGGCGCTGGGCAACAACGATCAACGTCCCGATTACGTGTGGCACGAAGGCACGGCATTCCACCTCTTCAATCTGCAAGACGGGCATGAAGCCGTCTGTGAAGTGCCCGCTGCTGACGGATCGGTGATCTTTACTTTAAAAGCAGCACGTACTGGCAACACGATTACTGTGACTGGTGCGGGCGAGGCGAAGAACTGGACACTGTGCCTGCGCAATGTTGTGAAAGTAAATGGTCTGCAAGACGGTTCGCAGGCTGAAAGTGAGCAGGGGCTGGTGGTGAAGCCTCAAGGGAATGCGCTGACAATTACGTTGTAA", + "dna_sequence_length": 2319, + "functions": [ + "putative alpha-glucosidase" + ], + "id": "CDS_3603", + "location": [ + [ + "NC_000913", + 3834537, + "-", + 2319 + ] + ], + "md5": "a5f9ab8e97056d493e615a84b120ce3d", + "parent_gene": "", + "protein_md5": "1b6d2d7e1bca3eaf1ef7acb492e59839", + "protein_translation": "MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL", + "protein_translation_length": 772, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011953" + ], + [ + "gene_synonym", + "ECK3647" + ], + [ + "gene_synonym", + "EcoGene:EG11686" + ], + [ + "gene_synonym", + "GI:90111629" + ], + [ + "gene_synonym", + "GeneID:948168" + ], + [ + "gene_synonym", + "JW5939" + ], + [ + "gene_synonym", + "NP_418114.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31435" + ], + [ + "gene_synonym", + "b3657" + ], + [ + "gene_synonym", + "yicJ" + ] + ], + "dna_sequence": "ATGAAGAGTGAAGTGTTGTCCGTTAAAGAGAAAATTGGTTATGGCATGGGAGACGCCGCCAGCCACATTATTTTCGATAACGTAATGTTATATATGATGTTCTTTTATACCGATATTTTTGGCATTCCTGCCGGTTTTGTCGGAACCATGTTTTTGGTCGCTCGTGCACTGGATGCGATTTCCGATCCTTGCATGGGGTTGTTGGCCGATCGAACGCGCTCTCGCTGGGGTAAATTTCGTCCGTGGGTACTGTTTGGCGCACTGCCATTCGGGATCGTCTGTGTACTGGCCTATAGCACGCCAGATCTCAGTATGAACGGCAAAATGATCTATGCAGCAATTACTTACACCCTACTTACCTTACTTTATACCGTCGTCAATATCCCTTACTGCGCATTGGGTGGTGTAATCACCAATGACCCGACTCAGCGTATCTCGCTGCAATCCTGGCGTTTTGTGCTGGCGACCGCGGGAGGCATGCTTTCTACTGTTCTGATGATGCCACTGGTTAATTTAATTGGCGGTGATAATAAACCACTCGGTTTCCAGGGCGGTATCGCGGTCCTTTCCGTGGTGGCATTCATGATGCTGGCATTTTGTTTCTTCACCACTAAAGAACGCGTTGAAGCACCACCTACAACAACGTCTATGCGGGAAGATTTACGTGATATCTGGCAAAACGACCAGTGGCGGATTGTCGGTTTACTAACCATTTTCAATATCCTGGCGGTGTGCGTACGCGGTGGGGCGATGATGTATTACGTCACATGGATTTTGGGCACGCCGGAAGTGTTTGTCGCTTTTCTCACCACTTATTGCGTGGGTAACCTGATTGGTTCCGCACTGGCAAAACCTCTGACCGACTGGAAATGTAAAGTCACTATCTTCTGGTGGACGAACGCCCTGCTGGCAGTGATTAGCCTCGCGATGTTCTTTGTTCCCATGCAGGCCAGCATCACTATGTTTGTCTTCATCTTCGTGATTGGTGTGTTGCATCAACTGGTGACACCTATCCAGTGGGTAATGATGTCCGATACCGTCGACTACGGCGAGTGGTGCAATGGTAAACGCCTGACCGGGATCAGTTTTGCTGGCACGCTGTTTGTGCTCAAACTGGGGTTGGCCTTCGGCGGCGCTCTTATCGGCTGGATGCTGGCTTATGGCGGATATGATGCGGCAGAAAAAGCGCAGAACAGCGCCACGATTAGCATCATTATTGCGCTATTCACGATTGTTCCGGCGATCTGTTATTTGCTGAGCGCGATTATCGCTAAACGCTACTACTCACTCACGACGCACAATCTGAAAACCGTTATGGAACAGCTGGCTCAGGGTAAACGCCGTTGCCAGCAACAATTCACCTCTCAAGAAGTGCAGAACTAA", + "dna_sequence_length": 1383, + "functions": [ + "putative transporter" + ], + "id": "CDS_3604", + "location": [ + [ + "NC_000913", + 3835929, + "-", + 1383 + ] + ], + "md5": "3077a130d540a9cbe92da2ce58e25ce3", + "parent_gene": "", + "protein_md5": "28b70be0d43a17f9e463f1a3743b00b1", + "protein_translation": "MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4456" + ], + [ + "gene_synonym", + "EcoGene:EG14448" + ], + [ + "gene_synonym", + "GeneID:5625579" + ], + [ + "gene_synonym", + "b4653" + ], + [ + "gene_synonym", + "erhM" + ], + [ + "gene_synonym", + "rhuM" + ], + [ + "gene_synonym", + "yicT" + ] + ], + "dna_sequence": "ATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTA", + "dna_sequence_length": 132, + "id": "CDS_3605", + "location": [ + [ + "NC_000913", + 3836425, + "+", + 132 + ] + ], + "md5": "dff1a5e4ef3be24553ac10cd306bc31e", + "parent_gene": "", + "protein_md5": "d65df6b24ac2c6b544dd539b5fdb483a", + "protein_translation": "MDDERLKNPPVGSSVLERIRDIHASMRRVYLQVICPPADSQPTV", + "protein_translation_length": 44, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011959" + ], + [ + "gene_synonym", + "ECK3649" + ], + [ + "gene_synonym", + "EcoGene:EG11687" + ], + [ + "gene_synonym", + "GI:16131529" + ], + [ + "gene_synonym", + "GeneID:948177" + ], + [ + "gene_synonym", + "JW3633" + ], + [ + "gene_synonym", + "NP_418115.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31436" + ], + [ + "gene_synonym", + "b3659" + ], + [ + "gene_synonym", + "setC" + ], + [ + "gene_synonym", + "yicK" + ] + ], + "dna_sequence": "ATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCTATAATGGTAGGTTTTTTCTTCACCGGTAGCGCTATTATGGGAATTCTGGTCAGTCAATTTCTGGCAAGGCACTCCGATAAACAAGGCGACCGTAAATTACTGATTCTGCTATGTTGCTTATTTGGAGTGCTGGCCTGCACGCTTTTTGCGTGGAATCGCAACTACTTCATTCTCCTCTCAACGGGCGTACTTCTGAGTAGTTTTGCTTCCACCGCAAACCCGCAAATGTTCGCCCTCGCCCGTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGACTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGAATAATCTCTACATGATAAATATGCCGCTATTTATTATTGATGAACTGCATCTAACCGATAAACTGACTGGAGAAATGATTGGTATCGCTGCCGGTCTGGAAATTCCGATGATGTTAATCGCAGGCTATTACATGAAACGTATTGGCAAGCGACTATTAATGCTCATTGCTATCGTGAGTGGAATGTGTTTTTACGCCAGCGTACTCATGGCGACGACTCCGGCGGTTGAGCTGGAATTGCAAATTCTTAATGCCATCTTCCTTGGTATTCTCTGTGGTATCGGCATGCTTTATTTTCAGGACTTGATGCCTGAAAAAATAGGCTCTGCGACAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAG", + "dna_sequence_length": 1185, + "functions": [ + "putative arabinose efflux transporter" + ], + "id": "CDS_3606", + "location": [ + [ + "NC_000913", + 3836953, + "+", + 1185 + ] + ], + "md5": "4478275a131eca3a1a4cf09ba55f60f4", + "parent_gene": "", + "protein_md5": "26e6c4258efce29f95fde20ccbf80368", + "protein_translation": "MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLTGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCGIGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGIAMICLLFIKDI", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011962" + ], + [ + "gene_synonym", + "ECK3650" + ], + [ + "gene_synonym", + "EcoGene:EG11688" + ], + [ + "gene_synonym", + "GI:16131530" + ], + [ + "gene_synonym", + "GeneID:948176" + ], + [ + "gene_synonym", + "JW3634" + ], + [ + "gene_synonym", + "NP_418116.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31437" + ], + [ + "gene_synonym", + "b3660" + ], + [ + "gene_synonym", + "yicL" + ] + ], + "dna_sequence": "ATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTATTTTGACATCGCTGGTCGGGACTTTTTTATTGGTGACACACGGTAATCCGACGTCATTATCGATCTCTCCTGCCGCGTTGTTCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGCGGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAACTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTTGGTGGTCATTGGTACGTCCCTGACATTTAGTCTGTACCTGAAAGGAGCACAATTAATTGGCGGTCCAAAAGCCAGCATTTTGAGCTGTGCAGAACCATTAAGTAGCGCGCTACTCTCTTTGCTGTTGCTGGGGATCACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGA", + "dna_sequence_length": 924, + "functions": [ + "EamA family inner membrane putative transporter" + ], + "id": "CDS_3607", + "location": [ + [ + "NC_000913", + 3838248, + "+", + 924 + ] + ], + "md5": "705ba92e1c723e877b96bdffac053481", + "parent_gene": "", + "protein_md5": "631fc3693468fa20b776944815bc5784", + "protein_translation": "MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKINRPARHK", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011964" + ], + [ + "gene_synonym", + "ECK3651" + ], + [ + "gene_synonym", + "EcoGene:EG10657" + ], + [ + "gene_synonym", + "GI:16131531" + ], + [ + "gene_synonym", + "GeneID:948175" + ], + [ + "gene_synonym", + "JW3635" + ], + [ + "gene_synonym", + "NP_418117.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04846" + ], + [ + "gene_synonym", + "b3661" + ], + [ + "gene_synonym", + "nlpA" + ] + ], + "dna_sequence": "ATGAAACTGACAACACATCATCTACGGACAGGGGCCGCATTATTGCTGGCCGGAATTCTGCTGGCAGGTTGCGACCAGAGTAGCAGCGATGCAAAACACATTAAAGTTGGCGTTATAAATGGCGCAGAACAAGATGTCGCGGAAGTCGCTAAAAAGGTGGCAAAAGAGAAATATGGCCTCGATGTTGAACTGGTAGGATTTAGCGGTTCGTTGCTACCGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTATTCCAAAAAAATCAAAACCGTGGCGCAAATAAAAGAAGGCGCGACAGTGGCGATCCCCAACGACCCGACCAACCTTGGTCGCGCACTTTTACTGTTGCAAAAAGAGAAGCTAATTACTCTGAAAGAGGGAAAAGGGTTATTACCTACCGCGCTGGATATAACCGATAATCCTCGTCATTTGCAGATTATGGAACTCGAGGGGGCGCAGCTCCCGCGCGTACTGGATGATCCCAAAGTTGATGTAGCGATTATCAGCACCACTTACATTCAGCAGACCGGGCTTTCTCCGGTGCACGACAGCGTATTTATTGAAGATAAGAATTCGCCGTATGTGAATATTTTGGTGGCACGGGAAGATAATAAGAATGCAGAAAACGTGAAGGAATTTCTGCAATCTTATCAATCACCCGAAGTCGCTAAAGCGGCAGAAACCATTTTTAACGGTGGCGCGGTGCCTGGCTGGTAA", + "dna_sequence_length": 819, + "functions": [ + "cytoplasmic membrane lipoprotein-28" + ], + "id": "CDS_3608", + "location": [ + [ + "NC_000913", + 3839993, + "-", + 819 + ] + ], + "md5": "8358c3cda5246781d48378cf6a2d3bc8", + "parent_gene": "", + "protein_md5": "a4d4ea3ad968ca25c78b95d2bd8c0bc2", + "protein_translation": "MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW", + "protein_translation_length": 272, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285076" + ], + [ + "gene_synonym", + "ECK3652" + ], + [ + "gene_synonym", + "EcoGene:EG14429" + ], + [ + "gene_synonym", + "GI:94541128" + ], + [ + "gene_synonym", + "GeneID:1450300" + ], + [ + "gene_synonym", + "JW5965" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2M7X4" + ], + [ + "gene_synonym", + "YP_588471.1" + ], + [ + "gene_synonym", + "b4555" + ], + [ + "gene_synonym", + "yicS" + ] + ], + "dna_sequence": "ATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGAACGTAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAA", + "dna_sequence_length": 294, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_3609", + "location": [ + [ + "NC_000913", + 3840215, + "+", + 294 + ] + ], + "md5": "02353a9c42d6ff56a5d2aa59f12fb58c", + "parent_gene": "", + "protein_md5": "e8cf46436da140db9d3c2c5b52c007d6", + "protein_translation": "MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011967" + ], + [ + "gene_synonym", + "ECK3653" + ], + [ + "gene_synonym", + "EcoGene:EG11689" + ], + [ + "gene_synonym", + "GI:145698327" + ], + [ + "gene_synonym", + "GeneID:948213" + ], + [ + "gene_synonym", + "JW5938" + ], + [ + "gene_synonym", + "NP_418118.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADL1" + ], + [ + "gene_synonym", + "b3662" + ], + [ + "gene_synonym", + "gaiA" + ], + [ + "gene_synonym", + "nepI" + ], + [ + "gene_synonym", + "yicM" + ] + ], + "dna_sequence": "ATGAGTGAATTTATTGCCGAAAACCGCGGCGCGGATGCCATCACCCGACCGAACTGGTCAGCCGTTTTCTCGGTGGCGTTTTGTGTCGCCTGTCTGATTATCGTTGAGTTTTTGCCCGTCAGTTTGTTGACGCCAATGGCCCAGGATTTAGGCATTTCGGAAGGGGTTGCCGGGCAATCGGTGACCGTGACCGCCTTTGTGGCAATGTTTGCCAGTTTGTTTATTACCCAGACAATTCAGGCTACTGACCGCCGCTACGTTGTTATTTTGTTTGCCGTTTTGCTGACGCTCTCCTGCTTGCTGGTTTCCTTTGCTAACTCATTCAGTTTGCTTTTAATCGGTCGTGCCTGTCTGGGGCTGGCGCTGGGCGGGTTCTGGGCGATGTCGGCGTCGCTGACCATGCGTCTGGTGCCGCCGCGTACGGTGCCGAAGGCGCTGTCGGTGATCTTCGGCGCGGTTTCTATTGCGCTGGTGATTGCCGCGCCGTTGGGCAGTTTTTTAGGCGAGCTTATCGGTTGGCGCAATGTCTTTAATGCGGCGGCGGTGATGGGCGTGCTGTGTATTTTCTGGATTATCAAATCATTGCCTTCACTGCCAGGCGAACCCTCGCATCAGAAACAAAATACTTTCCGCTTATTACAACGTCCGGGTGTGATGGCAGGGATGATCGCCATCTTCATGTCTTTCGCCGGGCAGTTTGCTTTCTTCACGTATATTCGCCCGGTGTATATGAACCTGGCGGGATTCGGCGTGGATGGCTTAACGCTGGTGCTGTTGAGTTTTGGTATCGCCAGCTTTATTGGTACGTCGCTTTCGTCGTTCATTCTTAAACGTTCGGTAAAACTGGCCTTAGCAGGCGCGCCGTTAATACTGGCTGTGAGTGCGTTGGTACTGACGTTGTGGGGAAGCGATAAAATCGTTGCTACCGGCGTGGCGATTATCTGGGGGCTAACTTTTGCATTGGTTCCCGTCGGCTGGTCAACGTGGATCACCCGCTCGCTGGCCGATCAGGCAGAAAAAGCCGGGTCTATTCAGGTGGCGGTTATTCAGCTTGCTAATACCTGTGGCGCGGCAATCGGCGGTTATGCGCTGGATAATATTGGTCTGACTTCGCCGTTGATGTTGTCCGGCACATTGATGTTGCTGACTGCATTGTTGGTTACTGCAAAGGTGAAAATGAAGAAATCCTGA", + "dna_sequence_length": 1191, + "functions": [ + "putative transporter" + ], + "id": "CDS_3610", + "location": [ + [ + "NC_000913", + 3841739, + "-", + 1191 + ] + ], + "md5": "37230e595d380800ff79378a6cad98b1", + "parent_gene": "", + "protein_md5": "fca3ea0f99b22a857e731e9a4b27558e", + "protein_translation": "MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011972" + ], + [ + "gene_synonym", + "ECK3654" + ], + [ + "gene_synonym", + "EcoGene:EG11690" + ], + [ + "gene_synonym", + "GI:90111630" + ], + [ + "gene_synonym", + "GeneID:948173" + ], + [ + "gene_synonym", + "JW5637" + ], + [ + "gene_synonym", + "NP_418119.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADL3" + ], + [ + "gene_synonym", + "b3663" + ], + [ + "gene_synonym", + "yicN" + ] + ], + "dna_sequence": "ATGATCTGGATAATGCTCGCCACGCTGGCGGTAGTGTTTGTGGTTGGTTTTCGGGTGCTGACATCCGGGGCCAGAAAAGCGATTCGCCGTCTCAGCGATCGGCTGAACATCGATGTCGTACCCGTGGAGTCGATGGTCGATCAAATGGGAAAGTCAGCTGGTGACGAATTTTTACGTTATTTGCATCGTCCGGATGAGTCGCACCTGCAAAACGCCGCGCAGGTGTTGCTCATCTGGCAAATTGTCATTGTCGATGGTAGCGAACAGAACCTGCTGCAATGGCATCGGATTTTACAAAAAGCTCGCCTCGCCGCGCCGATTACCGACGCTCAGGTCAGGCTGGCGCTAGGTTTTCTGCGCGAAACCGAACCTGAAATGCAGGATATTAATGCTTTTCAGATGCGCTATAACGCGTTCTTTCAGCCTGCCGAGGGCGTTCACTGGTTGCATTGA", + "dna_sequence_length": 453, + "functions": [ + "DUF1198 family protein" + ], + "id": "CDS_3611", + "location": [ + [ + "NC_000913", + 3842402, + "-", + 453 + ] + ], + "md5": "a93b825d18d43a6a9c395061190bcc0a", + "parent_gene": "", + "protein_md5": "f3b16c26d8b8718a1f5f2fd3d3d5fb58", + "protein_translation": "MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVESMVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKARLAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011975" + ], + [ + "gene_synonym", + "ECK3655" + ], + [ + "gene_synonym", + "EcoGene:EG11691" + ], + [ + "gene_synonym", + "GI:90111631" + ], + [ + "gene_synonym", + "GeneID:948174" + ], + [ + "gene_synonym", + "JW5636" + ], + [ + "gene_synonym", + "NP_418120.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31440" + ], + [ + "gene_synonym", + "adeQ" + ], + [ + "gene_synonym", + "b3664" + ], + [ + "gene_synonym", + "pbuA" + ], + [ + "gene_synonym", + "yicO" + ] + ], + "dna_sequence": "ATGAATAATGACAATACCGATTACGTGAGTAATGAATCAGGGACGCTTTCGCGATTATTTAAACTACCTCAGCATGGGACCACCGTCCGCACAGAATTGATTGCGGGGATGACCACTTTTTTAACCATGGTGTACATCGTTTTTGTGAACCCGCAAATCCTCGGCGCGGCACAAATGGACCCGAAAGTGGTGTTTGTTACCACCTGTTTGATTGCCGGTATCGGCAGTATTGCGATGGGGATATTTGCTAACTTACCCGTGGCGCTGGCTCCGGCAATGGGGCTGAACGCCTTCTTTGCCTTCGTGGTCGTGGGGGCGATGGGCATCTCCTGGCAGACCGGGATGGGCGCAATATTCTGGGGCGCAGTTGGACTATTTTTGCTCACGCTGTTTCGTATCCGGTACTGGATGATCTCCAACATTCCCTTAAGTTTACGTATTGGTATCACCAGCGGAATTGGATTATTTATCGCCTTAATGGGATTAAAAAATACTGGCGTTATTGTCGCCAATAAAGACACGCTGGTGATGATTGGCGATTTAAGTTCTCACGGCGTGTTGTTAGGTATTTTAGGGTTTTTTATTATAACCGTGTTGTCATCACGTCATTTTCATGCCGCGGTGCTGGTTTCTATTGTGGTGACGTCTTGCTGTGGATTATTTTTCGGTGATGTTCATTTTAGCGGCGTCTATTCCATTCCGCCTGATATTAGCGGCGTCATTGGTGAAGTAGATTTGAGCGGCGCGTTAACACTTGAACTCGCCGGTATCATTTTCTCCTTTATGCTGATCAACCTATTTGATTCATCAGGAACATTAATTGGTGTAACTGATAAAGCGGGCTTAATAGATGGTAACGGTAAATTCCCCAATATGAATAAGGCGCTGTATGTTGATAGCGTCAGTTCGGTGGCGGGTGCGTTTATCGGCACCTCGTCTGTTACTGCCTATATTGAAAGTACTTCTGGTGTGGCAGTCGGTGGCCGCACGGGGCTGACTGCGGTTGTGGTTGGCGTTATGTTCCTGTTGGTTATGTTCTTCTCACCGCTGGTGGCGATAGTTCCTCCTTACGCAACCGCCGGAGCGTTAATCTTTGTTGGCGTGCTGATGACTTCGAGCCTGGCGCGCGTTAACTGGGATGATTTTACCGAATCGGTGCCTGCGTTTATTACCACGGTGATGATGCCCTTTACTTTCTCGATCACCGAAGGGATTGCACTCGGCTTTATGTCGTACTGCATCATGAAAGTATGCACCGGGCGCTGGCGCGATCTGAACCTGTGTGTGGTGGTGGTCGCAGCTCTGTTTGCACTGAAGATTATTCTGGTGGATTAG", + "dna_sequence_length": 1335, + "functions": [ + "adenine permease, high affinity", + "adenine:H+ symporter" + ], + "id": "CDS_3612", + "location": [ + [ + "NC_000913", + 3843789, + "-", + 1335 + ] + ], + "md5": "20fc07deed2bb184d6af104aa4b6bcbc", + "parent_gene": "", + "protein_md5": "3c9bacd07595e0776ad06cca96c29783", + "protein_translation": "MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD", + "protein_translation_length": 444, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011979" + ], + [ + "gene_synonym", + "ECK3656" + ], + [ + "gene_synonym", + "EcoGene:EG11692" + ], + [ + "gene_synonym", + "GI:16131535" + ], + [ + "gene_synonym", + "GeneID:948210" + ], + [ + "gene_synonym", + "JW3640" + ], + [ + "gene_synonym", + "NP_418121.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31441" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "adeC" + ], + [ + "gene_synonym", + "adeD" + ], + [ + "gene_synonym", + "adu" + ], + [ + "gene_synonym", + "b3665" + ], + [ + "gene_synonym", + "yicP" + ] + ], + "dna_sequence": "ATGAATAATTCTATTAACCATAAATTTCATCACATTAGCCGGGCTGAATACCAGGAATTGTTAGCCGTTTCCCGTGGCGACGCTGTTGCCGATTATATTATTGATAATGTCTCTATTCTCGACCTGATCAATGGCGGAGAAATTTCCGGCCCAATTGTGATTAAAGGACGTTACATTGCCGGTGTTGGCGCAGAATACACTGATGCTCCGGCTTTGCAGCGGATTGATGCTCGCGGCGCAACGGCGGTGCCAGGGTTTATTGATGCTCACCTGCATATTGAATCCAGCATGATGACGCCGGTCACTTTTGAAACCGCTACCCTGCCGCGCGGCCTGACGACCGTTATTTGCGACCCTCATGAAATCGTCAACGTGATGGGCGAAGCCGGATTCGCCTGGTTTGCCCGCTGTGCCGAACAGGCAAGGCAAAACCAGTACTTACAGGTCAGCTCTTGCGTACCCGCCCTGGAAGGCTGCGATGTTAACGGTGCCAGTTTTACCCTTGAACAGATGCTCGCCTGGCGGGACCATCCGCAGGTTACCGGCCTTGCAGAAATGATGGACTACCCTGGCGTAATTAGCGGGCAGAATGCGCTGCTCGATAAACTGGATGCATTTCGCCACCTGACGCTGGACGGTCACTGCCCGGGTTTGGGTGGTAAAGAACTTAACGCCTATATTACTGCGGGTATTGAAAACTGCCACGAAAGTTATCAGCTGGAAGAAGGACGCCGGAAATTACAACTCGGCATGTCGTTGATGATCCGCGAAGGGTCCGCTGCCCGCAATCTCAACGCGCTGGCACCGTTGATCAACGAATTTAACAGCCCGCAATGCATGCTCTGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGGAAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGATGTGAGCTTTATTGCCGTACTTGAGCGTTACGGGCAACGGCTGGCTCCGGCTTGTGGTTTGCTTGGCGGCTTTGGACTGAATGAAGGTGCGCTGGCTGCGACGGTCAGCCATGACAGCCATAATATTGTGGTGATCGGTCGCAGTGCCGAAGAGATGGCGCTGGCGGTCAATCAGGTGATTCAGGATGGCGGCGGGCTGTGCGTGGTACGTAACGGCCAGGTACAAAGTCATCTGCCGTTACCCATTGCCGGGCTGATGAGCACCGACACGGCGCAGTCGCTGGCGGAACAAATTGACGCCTTGAAAGCCGCCGCCCGTGAATGCGGTCCGTTACCCGATGAGCCGTTTATTCAGATGGCGTTTCTTTCTCTGCCAGTGATCCCCGCGCTAAAACTAACCAGTCAGGGGCTATTTGATGGCGAGAAGTTTGCCTTCACTACGCTGGAAGTCACGGAATAA", + "dna_sequence_length": 1767, + "functions": [ + "cryptic adenine deaminase" + ], + "id": "CDS_3613", + "location": [ + [ + "NC_000913", + 3843964, + "+", + 1767 + ] + ], + "md5": "91522d837dbf6aedb90e29165fa59c89", + "parent_gene": "", + "protein_md5": "11c506f1df10ee6588abb52a3bba1539", + "protein_translation": "MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVSFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVNQVIQDGGGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKFAFTTLEVTE", + "protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011981" + ], + [ + "gene_synonym", + "ECK3657" + ], + [ + "gene_synonym", + "EcoGene:EG11054" + ], + [ + "gene_synonym", + "GI:16131536" + ], + [ + "gene_synonym", + "GeneID:948201" + ], + [ + "gene_synonym", + "JW3641" + ], + [ + "gene_synonym", + "NP_418122.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC0" + ], + [ + "gene_synonym", + "b3666" + ], + [ + "gene_synonym", + "uhpT" + ] + ], + "dna_sequence": "ATGCTGGCTTTCTTAAACCAGGTTCGCAAGCCGACCCTGGACCTTCCGCTCGAAGTGCGGCGCAAAATGTGGTTCAAACCGTTCATGCAATCCTACCTGGTGGTCTTTATCGGCTACCTGACGATGTACCTGATTCGCAAGAACTTTAACATCGCGCAGAACGATATGATTTCGACCTACGGGTTGAGCATGACGCAGCTGGGGATGATCGGCCTGGGTTTCTCCATCACTTATGGCGTGGGTAAAACGCTGGTTTCCTACTACGCCGACGGCAAAAACACCAAACAATTCCTGCCGTTCATGCTGATCCTCTCTGCTATTTGTATGCTGGGCTTCAGTGCCAGTATGGGCAGCGGCTCGGTTAGCCTGTTCCTGATGATTGCCTTCTACGCCTTAAGCGGCTTTTTCCAGAGTACCGGCGGTTCGTGCAGTTACTCCACCATCACCAAATGGACGCCGCGTCGTAAACGCGGGACATTCCTCGGTTTCTGGAATATTTCTCACAACCTTGGCGGTGCAGGCGCAGCAGGTGTGGCGCTGTTCGGGGCAAATTACCTGTTCGATGGCCATGTCATCGGCATGTTTATCTTCCCGTCGATTATCGCGCTGATTGTCGGTTTTATCGGCCTGCGTTACGGCAGCGACTCCCCGGAATCTTATGGCCTCGGCAAAGCTGAAGAACTGTTCGGCGAGGAGATCAGCGAAGAGGACAAAGAGACAGAATCTACCGATATGACCAAGTGGCAGATCTTTGTTGAGTATGTGCTGAAAAACAAAGTGATCTGGCTGCTGTGCTTCGCCAACATTTTCCTCTATGTGGTACGTATTGGTATCGACCAGTGGTCAACCGTATACGCGTTCCAGGAACTGAAACTCTCTAAAGCGGTGGCGATTCAGGGCTTTACGCTGTTTGAAGCTGGTGCGCTGGTCGGTACGCTGCTGTGGGGCTGGCTCTCTGACCTGGCGAACGGTCGCCGTGGCCTGGTGGCCTGCATCGCGCTGGCGCTGATTATCGCCACGCTCGGTGTGTATCAACATGCCAGTAACGAATATATCTATCTGGCTTCTCTCTTTGCGTTGGGTTTCCTGGTCTTTGGCCCGCAATTGTTGATTGGTGTGGCTGCTGTTGGCTTTGTACCTAAAAAAGCGATTGGCGCTGCCGATGGTATTAAAGGCACCTTTGCTTACCTGATTGGTGACAGCTTTGCCAAGTTAGGTCTGGGAATGATTGCCGATGGGACGCCGGTATTCGGCCTTACCGGCTGGGCAGGCACCTTCGCCGCGCTGGATATCGCCGCGATTGGTTGTATCTGCCTGATGGCGATAGTGGCGGTAATGGAAGAACGCAAAATCCGCCGCGAGAAAAAAATTCAGCAGTTGACAGTGGCATAA", + "dna_sequence_length": 1392, + "functions": [ + "hexose phosphate transporter" + ], + "id": "CDS_3614", + "location": [ + [ + "NC_000913", + 3847167, + "-", + 1392 + ] + ], + "md5": "208d05514c3625a3729fce11a6e47f2a", + "parent_gene": "", + "protein_md5": "fc6d51953f67c437bdd39958c2e4ad8e", + "protein_translation": "MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA", + "protein_translation_length": 463, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011990" + ], + [ + "gene_synonym", + "ECK3658" + ], + [ + "gene_synonym", + "EcoGene:EG11053" + ], + [ + "gene_synonym", + "GI:90111632" + ], + [ + "gene_synonym", + "GeneID:948184" + ], + [ + "gene_synonym", + "JW3642" + ], + [ + "gene_synonym", + "NP_418123.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09836" + ], + [ + "gene_synonym", + "b3667" + ], + [ + "gene_synonym", + "uhpC" + ] + ], + "dna_sequence": "ATGTTGCCGTTTCTGAAAGCGCCTGCCGATGCGCCATTAATGACTGATAAATATGAAATTGATGCCCGCTATCGCTACTGGCGTCGGCATATTCTGCTGACCATCTGGCTGGGTTACGCGCTGTTTTACTTCACGCGGAAAAGTTTTAACGCCGCCGTACCAGAAATCCTTGCTAACGGCGTGCTCAGCCGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCGGCATTGTCAGCGATCGCTCAAATGCCCGTTATTTTATGGGGATAGGGCTTATCGCCACGGGCATTATCAACATTCTGTTTGGCTTCTCGACGTCGCTATGGGCGTTTGCCGTGCTCTGGGTGCTGAACGCCTTTTTCCAGGGCTGGGGTTCACCGGTGTGTGCGCGTCTGTTAACGGCCTGGTATTCACGTACCGAGCGCGGCGGTTGGTGGGCATTATGGAACACGGCGCATAACGTCGGCGGCGCACTCATTCCCATTGTGATGGCAGCGGCTGCGCTGCATTACGGCTGGCGTGCCGGGATGATGATTGCTGGTTGTATGGCGATAGTCGTGGGGATTTTTCTCTGCTGGCGGCTACGCGATCGCCCGCAGGCGTTAGGTTTACCGGCGGTCGGTGAATGGCGACACGACGCGCTGGAAATTGCTCAACAACAAGAAGGGGCAGGGTTGACGCGTAAAGAGATCCTCACCAAATATGTGTTGCTGAATCCGTATATCTGGCTGCTTTCGTTTTGCTATGTGCTGGTCTATGTGGTCCGGGCGGCGATCAACGACTGGGGCAATTTGTATATGTCCGAGACACTGGGCGTCGATCTGGTCACGGCGAATACGGCAGTGACGATGTTTGAACTGGGCGGATTTATCGGTGCGCTGGTAGCCGGTTGGGGCTCGGACAAATTGTTTAACGGCAACCGAGGGCCGATGAATTTGATTTTCGCCGCCGGAATTTTGCTTTCAGTCGGCTCCCTGTGGCTGATGCCATTTGCCAGCTACGTGATGCAGGCAACCTGCTTCTTCACCATTGGTTTTTTTGTCTTTGGCCCACAGATGTTAATCGGTATGGCGGCGGCAGAGTGTTCCCACAAAGAGGCGGCAGGGGCGGCGACGGGGTTTGTCGGCTTGTTTGCTTATCTGGGGGCGTCGCTTGCTGGTTGGCCGCTGGCGAAAGTACTCGATACCTGGCACTGGAGCGGATTTTTTGTGGTTATCTCTATCGCCGCCGGGATTTCCGCACTGCTGTTACTGCCCTTTTTGAACGCCCAGACACCGCGCGAAGCGTGA", + "dna_sequence_length": 1320, + "functions": [ + "membrane protein regulates uhpT expression" + ], + "id": "CDS_3615", + "location": [ + [ + "NC_000913", + 3848624, + "-", + 1320 + ] + ], + "md5": "05421edc62ddf6be0ddc97bdabbdd91b", + "parent_gene": "", + "protein_md5": "e0f9e13214247c73bd510c739450d909", + "protein_translation": "MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYFTRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVGEWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLYMSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011993" + ], + [ + "gene_synonym", + "ECK3659" + ], + [ + "gene_synonym", + "EcoGene:EG11052" + ], + [ + "gene_synonym", + "GI:90111633" + ], + [ + "gene_synonym", + "GeneID:948195" + ], + [ + "gene_synonym", + "JW3643" + ], + [ + "gene_synonym", + "NP_418124.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09835" + ], + [ + "gene_synonym", + "b3668" + ], + [ + "gene_synonym", + "uhpB" + ] + ], + "dna_sequence": "ATGAAGACGTTGTTCTCCCGCTTAATTACCGTTATTGCCTGCTTTTTTATCTTCTCTGCCGCATGGTTTTGCCTGTGGAGTATCAGCCTGCATCTGGTTGAGCGCCCTGATATGGCGGTGCTGTTATTTCCGTTTGGTCTGCGTCTGGGGCTAATGCTGCAATGCCCGCGCGGATACTGGCCCGTATTGCTGGGCGCGGAGTGGCTGCTGATTTACTGGCTAACGCAGGCGGTCGGTTTAACCCATTTTCCGTTATTGATGATCGGTAGTTTACTGACGTTACTGCCCGTAGCGCTGATCTCGCGCTATCGCCATCAGCGTGACTGGCGCACCTTGCTGTTACAGGGGGCGGCGTTAACGGCGGCGGCGTTGTTGCAGTCGCTGCCCTGGCTTTGGCACGGCAAAGAGTCGTGGAATGCGCTGTTGCTGACTTTAACTGGCGGCCTGACGCTGGCCCCGATATGTCTGGTGTTCTGGCACTATCTCGCCAATAACACCTGGCTGCCGCTCGGTCCGTCACTGGTTTCTCAGCCAATCAACTGGCGCGGGCGACATCTGGTCTGGTACTTGCTGCTGTTTGTTATCAGTCTCTGGCTCCAGTTGGGATTGCCGGACGAACTGTCGCGCTTTACGCCATTCTGTCTGGCGCTGCCGATTATCGCGCTGGCCTGGCACTATGGTTGGCAAGGGGCGCTGATTGCGACGTTGATGAACGCCATCGCGCTGATCGCCAGTCAAACCTGGCGCGATCATCCGGTGGATTTATTGCTCTCGCTGCTGGTGCAAAGTCTGACAGGGTTGTTGCTTGGCGCTGGCATCCAGCGGTTGCGTGAACTTAACCAGTCGCTGCAAAAGGAACTGGCGCGCAATCAGCATCTGGCTGAACGGTTGCTGGAAACCGAAGAGAGCGTGCGCCGTGATGTGGCGCGTGAGCTGCATGATGATATCGGTCAGACCATCACTGCTATTCGTACTCAGGCGGGCATTGTTCAGCGGCTGGCGGCAGATAACGCCAGCGTGAAGCAGAGCGGGCAGCTCATCGAACAACTATCGCTGGGCGTTTACGACGCGGTGCGCCGTTTGTTGGGTCGGTTACGTCCGCGCCAGTTGGATGATCTCACCCTGGAGCAGGCCATCCGCTCACTGATGCGGGAAATGGAGCTGGAAGGGCGCGGTATTGTCAGCCATCTCGAATGGCGAATCGATGAATCAGCGTTAAGCGAAAACCAGCGCGTGACGCTGTTTCGTGTCTGCCAGGAAGGGCTGAACAACATTGTGAAACATGCTGATGCCAGCGCGGTCACCCTGCAAGGCTGGCAGCAGGATGAACGGTTGATGCTGGTTATTGAAGACGATGGCAGCGGTTTGCCGCCGGGTTCCGGGCAACAAGGTTTTGGCCTCACCGGAATGCGCGAGCGCGTAACGGCGCTGGGTGGCACATTACACATTTCCTGTCTGCACGGCACGCGTGTCAGCGTTTCTCTACCTCAACGCTATGTCTAA", + "dna_sequence_length": 1503, + "functions": [ + "sensory histidine kinase in two-component regulatory sytem with UhpA" + ], + "id": "CDS_3616", + "location": [ + [ + "NC_000913", + 3850136, + "-", + 1503 + ] + ], + "md5": "22d05ce40fd64556bbfdd9d2d2c9c8d9", + "parent_gene": "", + "protein_md5": "5005d6db5bf8024bec200c0277610d11", + "protein_translation": "MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011995" + ], + [ + "gene_synonym", + "ECK3660" + ], + [ + "gene_synonym", + "EcoGene:EG11051" + ], + [ + "gene_synonym", + "GI:16131539" + ], + [ + "gene_synonym", + "GeneID:948178" + ], + [ + "gene_synonym", + "JW3644" + ], + [ + "gene_synonym", + "NP_418125.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGA6" + ], + [ + "gene_synonym", + "b3669" + ], + [ + "gene_synonym", + "uhpA" + ] + ], + "dna_sequence": "ATGATCACCGTTGCCCTTATAGACGATCACCTCATCGTCCGCTCCGGCTTTGCGCAGCTGCTGGGGCTGGAACCTGATTTGCAGGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGCTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCGATATCTCCATGCCCGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCCGTTCACGACAGTCCTGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCACGCGGCTTTCTTTCCAAACGCTGTAGCCCGGATGAACTCATTGCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTCGTCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCCGAACTGGGCTTGTCACCGAAAACGGTACACGTCCATCGCGCCAATCTGATGGAAAAACTGGGCGTCAGTAACGACGTAGAGCTGGCGCGCCGCATGTTTGATGGCTGGTGA", + "dna_sequence_length": 591, + "functions": [ + "response regulator in two-component regulatory system wtih UhpB" + ], + "id": "CDS_3617", + "location": [ + [ + "NC_000913", + 3850726, + "-", + 591 + ] + ], + "md5": "5c5d489121a121067274122c7068ebcc", + "parent_gene": "", + "protein_md5": "4aef5d5ffaa64bb81138a848c65b368b", + "protein_translation": "MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011997" + ], + [ + "gene_synonym", + "ECK3661" + ], + [ + "gene_synonym", + "EcoGene:EG10502" + ], + [ + "gene_synonym", + "GI:16131540" + ], + [ + "gene_synonym", + "GeneID:948183" + ], + [ + "gene_synonym", + "JW3645" + ], + [ + "gene_synonym", + "NP_418126.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADF8" + ], + [ + "gene_synonym", + "b3670" + ], + [ + "gene_synonym", + "ilvN" + ] + ], + "dna_sequence": "ATGCAAAACACAACTCATGACAACGTAATTCTGGAGCTCACCGTTCGCAACCATCCGGGCGTAATGACCCACGTTTGTGGCCTTTTTGCCCGCCGCGCTTTTAACGTTGAAGGCATTCTTTGTCTGCCGATTCAGGACAGCGACAAAAGCCATATCTGGCTACTGGTCAATGACGACCAGCGTCTGGAGCAGATGATAAGCCAAATCGATAAGCTGGAAGATGTCGTGAAAGTGCAGCGTAATCAGTCCGATCCGACGATGTTTAACAAGATCGCGGTGTTTTTTCAGTAA", + "dna_sequence_length": 291, + "functions": [ + "acetolactate synthase 1 small subunit" + ], + "id": "CDS_3618", + "location": [ + [ + "NC_000913", + 3851092, + "-", + 291 + ] + ], + "md5": "12b9aa0b874b354f5f9d2f165c2616f4", + "parent_gene": "", + "protein_md5": "8ef52e4ae7b1adaf3a97b79e67a3d302", + "protein_translation": "MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ", + "protein_translation_length": 96, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011999" + ], + [ + "gene_synonym", + "ECK3662" + ], + [ + "gene_synonym", + "EcoGene:EG10494" + ], + [ + "gene_synonym", + "GI:16131541" + ], + [ + "gene_synonym", + "GeneID:948182" + ], + [ + "gene_synonym", + "JW3646" + ], + [ + "gene_synonym", + "NP_418127.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08142" + ], + [ + "gene_synonym", + "b3671" + ], + [ + "gene_synonym", + "ilvB" + ] + ], + "dna_sequence": "ATGGCAAGTTCGGGCACAACATCGACGCGTAAGCGCTTTACCGGCGCAGAATTTATCGTTCATTTCCTGGAACAGCAGGGCATTAAGATTGTGACAGGCATTCCGGGCGGTTCTATCCTGCCTGTTTACGATGCCTTAAGCCAAAGCACGCAAATCCGCCATATTCTGGCCCGTCATGAACAGGGCGCGGGCTTTATCGCTCAGGGAATGGCGCGCACCGACGGTAAACCGGCGGTCTGTATGGCCTGTAGCGGACCGGGTGCGACTAACCTGGTGACCGCCATTGCCGATGCGCGGCTGGACTCCATCCCGCTGATTTGCATCACTGGTCAGGTTCCCGCCTCGATGATCGGCACCGACGCCTTCCAGGAAGTGGACACCTACGGCATCTCTATCCCCATCACCAAACACAACTATCTGGTCAGACATATCGAAGAACTCCCGCAGGTCATGAGCGATGCCTTCCGCATTGCGCAATCAGGCCGCCCAGGCCCGGTGTGGATAGACATTCCTAAGGATGTGCAAACGGCAGTTTTTGAGATTGAAACACAGCCCGCTATGGCAGAAAAAGCCGCCGCCCCCGCCTTTAGCGAAGAAAGCATTCGTGACGCAGCGGCGATGATTAACGCTGCCAAACGCCCGGTGCTTTATCTGGGCGGCGGTGTGATCAATGCGCCCGCACGGGTGCGTGAACTGGCGGAGAAAGCGCAACTGCCTACCACCATGACTTTAATGGCGCTGGGCATGTTGCCAAAAGCGCATCCGTTGTCGCTGGGTATGCTGGGGATGCACGGCGTGCGCAGCACCAACTATATTTTGCAGGAGGCGGATTTGTTGATAGTGCTCGGTGCGCGTTTTGATGACCGGGCGATTGGCAAAACCGAGCAGTTCTGTCCGAATGCCAAAATCATTCATGTCGATATCGACCGTGCAGAGCTGGGTAAAATCAAGCAGCCGCACGTGGCGATTCAGGCGGATGTTGATGACGTGCTGGCGCAGTTGATCCCGCTGGTGGAAGCGCAACCGCGTGCAGAGTGGCACCAGTTGGTAGCGGATTTGCAGCGTGAGTTTCCGTGTCCAATCCCGAAAGCGTGCGATCCGTTAAGCCATTACGGCCTGATCAACGCCGTTGCCGCCTGTGTCGATGACAATGCAATTATCACCACCGACGTTGGTCAGCATCAGATGTGGACCGCGCAAGCTTATCCGCTCAATCGCCCACGCCAGTGGCTGACCTCCGGTGGGCTGGGCACGATGGGTTTTGGCCTGCCTGCGGCGATTGGCGCTGCGCTGGCGAACCCGGATCGCAAAGTGTTGTGTTTCTCCGGCGACGGCAGCCTGATGATGAATATTCAGGAGATGGCGACCGCCAGTGAAAATCAGCTGGATGTCAAAATCATTCTGATGAACAACGAAGCGCTGGGGCTGGTGCATCAGCAACAGAGTCTGTTCTACGAGCAAGGCGTTTTTGCCGCCACCTATCCGGGCAAAATCAACTTTATGCAGATTGCCGCCGGATTCGGCCTCGAAACCTGTGATTTGAATAACGAAGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCATTGATGCCGAAGAAAAAGTTTACCCGATGGTGCCGCCAGGTGCGGCGAATACTGAAATGGTGGGGGAATAA", + "dna_sequence_length": 1689, + "functions": [ + "acetolactate synthase 2 large subunit" + ], + "id": "CDS_3619", + "location": [ + [ + "NC_000913", + 3852784, + "-", + 1689 + ] + ], + "md5": "70e2e69e7671055c7a8ba2f96f88e28b", + "parent_gene": "", + "protein_md5": "1676966fbe4eaf4797618b064ce9d92d", + "protein_translation": "MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQLIPLVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQASLQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE", + "protein_translation_length": 562, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012002" + ], + [ + "gene_synonym", + "ECK3663" + ], + [ + "gene_synonym", + "EcoGene:EG11275" + ], + [ + "gene_synonym", + "GI:16131542" + ], + [ + "gene_synonym", + "GeneID:948181" + ], + [ + "gene_synonym", + "JW3647" + ], + [ + "gene_synonym", + "NP_418128.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03061" + ], + [ + "gene_synonym", + "b3672" + ], + [ + "gene_synonym", + "ivbL" + ] + ], + "dna_sequence": "ATGACTACTTCCATGCTCAACGCAAAACTACTACCAACTGCGCCATCCGCCGCAGTGGTCGTCGTGCGTGTGGTGGTGGTCGTCGGCAATGCGCCGTAG", + "dna_sequence_length": 99, + "functions": [ + "ilvB operon leader peptide" + ], + "id": "CDS_3620", + "location": [ + [ + "NC_000913", + 3852988, + "-", + 99 + ] + ], + "md5": "eb0dd11491798fbb66ca8750262d1d1d", + "parent_gene": "", + "protein_md5": "1c33a7a64691bb4ff675788cf927599d", + "protein_translation": "MTTSMLNAKLLPTAPSAAVVVVRVVVVVGNAP", + "protein_translation_length": 32, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4427" + ], + [ + "gene_synonym", + "EcoGene:EG14402" + ], + [ + "gene_synonym", + "GI:145698329" + ], + [ + "gene_synonym", + "GeneID:5061527" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A627" + ], + [ + "gene_synonym", + "YP_001165331.1" + ], + [ + "gene_synonym", + "b4618" + ], + [ + "gene_synonym", + "tisB" + ], + [ + "gene_synonym", + "ysdA" + ], + [ + "gene_synonym", + "ysdB" + ] + ], + "dna_sequence": "ATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAA", + "dna_sequence_length": 90, + "functions": [ + "toxic membrane persister formation peptide, LexA-regulated" + ], + "id": "CDS_3621", + "location": [ + [ + "NC_000913", + 3853553, + "+", + 90 + ] + ], + "md5": "7d2582399f37791dad4acefaff332eed", + "parent_gene": "", + "protein_md5": "fb22c8b18a20f8ac9ec813f92f30da37", + "protein_translation": "MNLVDIAILILKLIVAALQLLDAVLKYLK", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012011" + ], + [ + "gene_synonym", + "ECK3664" + ], + [ + "gene_synonym", + "EcoGene:EG11693" + ], + [ + "gene_synonym", + "GI:90111634" + ], + [ + "gene_synonym", + "GeneID:948180" + ], + [ + "gene_synonym", + "JW5634" + ], + [ + "gene_synonym", + "NP_418129.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31442" + ], + [ + "gene_synonym", + "b3673" + ], + [ + "gene_synonym", + "emrD" + ], + [ + "gene_synonym", + "yicQ" + ] + ], + "dna_sequence": "ATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCGTCGGTCAGATGGCGCAAACCATTTATATTCCAGCTATTGCCGATATGGCGCGCGATCTCAACGTCCGTGAAGGGGCGGTGCAGAGCGTAATGGGCGCTTATCTGCTGACTTACGGTGTCTCACAGCTGTTTTATGGCCCGATTTCCGACCGCGTGGGCCGCCGACCGGTGATCCTCGTCGGAATGTCCATTTTTATGCTGGCAACGCTGGTCGCGGTCACGACCTCCAGTTTGACGGTGTTGATTGCCGCCAGCGCGATGCAGGGGATGGGCACCGGCGTTGGCGGCGTAATGGCGCGTACTTTACCGCGAGATTTATATGAACGGACACAGTTGCGCCATGCTAACAGCCTGTTAAACATGGGGATTCTCGTCAGTCCGTTGCTCGCACCGCTAATCGGCGGTCTGCTGGATACGATGTGGAACTGGCGCGCCTGTTATCTCTTTTTGTTGGTTCTTTGTGCTGGTGTGACCTTCAGTATGGCCCGCTGGATGCCGGAAACGCGTCCGGTCGATGCACCGCGCACGCGCCTGCTTACCAGTTATAAAACGCTTTTCGGTAACAGCGGTTTTAACTGTTATTTGCTGATGCTGATTGGCGGTCTGGCCGGGATTGCCGCCTTTGAAGCCTGCTCCGGCGTGCTGATGGGCGCGGTGTTAGGGCTGAGCAGTATGACGGTCAGTATTTTGTTTATTCTGCCGATTCCGGCAGCGTTTTTTGGCGCATGGTTTGCCGGACGTCCCAATAAACGCTTCTCCACGTTAATGTGGCAGTCGGTTATCTGCTGCCTGCTGGCTGGCTTGCTGATGTGGATCCCCGACTGGTTTGGCGTGATGAATGTCTGGACGCTGCTCGTTCCCGCCGCGCTGTTCTTTTTCGGTGCCGGGATGCTGTTTCCGCTGGCGACCAGCGGCGCGATGGAGCCGTTCCCCTTCCTGGCGGGCACGGCTGGCGCGCTGGTCGGCGGTCTGCAAAACATTGGTTCCGGCGTGCTGGCGTCGCTCTCTGCGATGTTGCCGCAAACCGGTCAGGGCAGCCTGGGGTTGTTGATGACCTTAATGGGATTGTTGATCGTGCTGTGCTGGCTGCCGCTGGCGACGCGGATGTCGCATCAGGGGCAGCCCGTTTAA", + "dna_sequence_length": 1185, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_3622", + "location": [ + [ + "NC_000913", + 3853922, + "+", + 1185 + ] + ], + "md5": "e6189bd6b341bff41e0ad31c596d22f3", + "parent_gene": "", + "protein_md5": "433a8c5b0af0a8dcf80c06fdde693613", + "protein_translation": "MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQPV", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012013" + ], + [ + "gene_synonym", + "ECK3665" + ], + [ + "gene_synonym", + "EcoGene:EG11694" + ], + [ + "gene_synonym", + "GI:16131544" + ], + [ + "gene_synonym", + "GeneID:948179" + ], + [ + "gene_synonym", + "JW3650" + ], + [ + "gene_synonym", + "NP_418130.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31443" + ], + [ + "gene_synonym", + "b3674" + ], + [ + "gene_synonym", + "yidF" + ] + ], + "dna_sequence": "ATGACAGGAAGTCAGGTCATTGATGCTGAAGAGGACAGGCATAAACTGGTTGTAGAGTACAAGGATGCTCTGCAACCTGCCGATTTTTATCACAATTTCAAACAGCGGGGCATCCGCTCCGTACAGCTCATTCCCTATCTTGAATTTGATGACCGGGGCGATCTGACGGCCGCTTCGGTGACAGCAGAGCTGTGGGGGAAATTTTTAATTGCCCTGTTCGAGTGTTGGGTGCGGGCAGATATCAGTCGTATCTCGATTGAGCTTTTTGACGCCACCTTACAAAAATGGTGTGGCAGCGAAAACCCGCAACCGCGCTGTGACTGCCAGGCGTGCGACTGGCATCGCCTGTGCCCGCACGCTCGGCAGGAGACGCCAGACAGCGTGCTTTGTGCGGGCTATCAGGCGTTTTATTCTTACTCCGCACCGCATATGCGGGTGATGCGTGATCTGATAAAGCAGCATCGTTCTCCCATGGAGCTGATGACGATGCTGCGGTGA", + "dna_sequence_length": 498, + "functions": [ + "putative Cys-type oxidative YidJ-maturating enzyme" + ], + "id": "CDS_3623", + "location": [ + [ + "NC_000913", + 3855611, + "-", + 498 + ] + ], + "md5": "86692e639c346426402d988aa095c4dc", + "parent_gene": "", + "protein_md5": "815d3e26f0732606ed252a69f9781385", + "protein_translation": "MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENPQPRCDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012015" + ], + [ + "gene_synonym", + "ECK3666" + ], + [ + "gene_synonym", + "EcoGene:EG11695" + ], + [ + "gene_synonym", + "GI:16131545" + ], + [ + "gene_synonym", + "GeneID:948191" + ], + [ + "gene_synonym", + "JW3651" + ], + [ + "gene_synonym", + "NP_418131.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADL6" + ], + [ + "gene_synonym", + "b3675" + ], + [ + "gene_synonym", + "yidG" + ] + ], + "dna_sequence": "ATGCCGGATAGCCGCAAAGCCAGACGCATTGCCGACCCAGGACTGCAGCCGGAGCGCACATCACTGGCGTGGTTTCGTACCATGCTGGGCTACGGCGCGTTGATGGCGTTGGCTATCAAACACAACTGGCACCAGGCGGGCATGTTATTCTGGATTTCGATTGGCATTCTCGCCATCGTGGCGCTGATCCTCTGGCACTACACCCGTAATCGCAATTTAATGGATGTCACGAATAGCGATTTTTCCCAATTTCACGTAGTCCGTGACAAATTTTTGATCTCCCTCGCGGTGTTATCTCTCGCAATACTGTTTGCTGTAACGCATATACATCAACTTATCGTATTTATTGAGAGAGTCGCATGA", + "dna_sequence_length": 363, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_3624", + "location": [ + [ + "NC_000913", + 3855970, + "-", + 363 + ] + ], + "md5": "22fe33941389f892e3eb39b3232352d7", + "parent_gene": "", + "protein_md5": "14cc7c3a30d651857f5c0fbe80b7a9e9", + "protein_translation": "MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012018" + ], + [ + "gene_synonym", + "ECK3667" + ], + [ + "gene_synonym", + "EcoGene:EG11696" + ], + [ + "gene_synonym", + "GI:16131546" + ], + [ + "gene_synonym", + "GeneID:948190" + ], + [ + "gene_synonym", + "JW3652" + ], + [ + "gene_synonym", + "NP_418132.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADM0" + ], + [ + "gene_synonym", + "b3676" + ], + [ + "gene_synonym", + "yidH" + ] + ], + "dna_sequence": "ATGAAAATTTCCCGCCTCGGAGAAGCGCCTGATTACCGCTTCTCGCTGGCTAATGAGCGTACTTTTCTGGCGTGGATCCGTACTGCACTAGGATTTCTGGCGGCGGGGGTTGGGCTTGATCAACTTGCGCCAGATTTCGCCACGCCCGTCATTCGCGAACTGCTGGCGTTGTTGTTGTGTCTGTTTTCCGGCGGGTTAGCGATGTATGGCTACTTGCGCTGGTTACGCAATGAAAAAGCGATGCGTCTGAAAGAGGACCTGCCCTACACCAACAGCTTATTAATCATTAGCTTAATATTGATGGTCGTGGCGGTGATCGTTATGGGACTGGTGTTGTATGCCGGATAG", + "dna_sequence_length": 348, + "functions": [ + "DUF202 family inner membrane protein" + ], + "id": "CDS_3625", + "location": [ + [ + "NC_000913", + 3856307, + "-", + 348 + ] + ], + "md5": "a203f6787511f25814afc8b61f5542d9", + "parent_gene": "", + "protein_md5": "ea3bb3b2b3d8f47b24456920edfefe29", + "protein_translation": "MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012022" + ], + [ + "gene_synonym", + "ECK3668" + ], + [ + "gene_synonym", + "EcoGene:EG11697" + ], + [ + "gene_synonym", + "GI:16131547" + ], + [ + "gene_synonym", + "GeneID:948189" + ], + [ + "gene_synonym", + "JW3653" + ], + [ + "gene_synonym", + "NP_418133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31446" + ], + [ + "gene_synonym", + "b3677" + ], + [ + "gene_synonym", + "yidI" + ] + ], + "dna_sequence": "ATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAA", + "dna_sequence_length": 450, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_3626", + "location": [ + [ + "NC_000913", + 3856415, + "+", + 450 + ] + ], + "md5": "38c7e6527c6f379179dd1bd8f1d17f7c", + "parent_gene": "", + "protein_md5": "b2aac0f03eb34d4328fb96c850b370c9", + "protein_translation": "MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012024" + ], + [ + "gene_synonym", + "ECK3669" + ], + [ + "gene_synonym", + "EcoGene:EG11705" + ], + [ + "gene_synonym", + "GI:16131548" + ], + [ + "gene_synonym", + "GeneID:948188" + ], + [ + "gene_synonym", + "JW3654" + ], + [ + "gene_synonym", + "NP_418134.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31447" + ], + [ + "gene_synonym", + "b3678" + ], + [ + "gene_synonym", + "yidJ" + ] + ], + "dna_sequence": "ATGAAACGCCCCAATTTTCTGTTCGTCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCTGAATACGCAAAATATTGATAGTCTGGCGGCGGAAGGTATTCGCTTTAATTCCGCCTACACCTGTTCACCGGTTTGTACGCCTGCACGGGCCGGACTATTTACCGGTATCTACGCTAACCAGTCCGGCCCGTGGACCAACAACGTCGCGCCAGGCAAAAACATCTCCACTATGGGGCGCTACTTTAAGGATGCCGGCTATCACACCTGTTACATCGGCAAATGGCATCTCGACGGTCATGACTATTTCGGCACTGGCGAGTGTCCGCCGGAGTGGGACGCTGATTACTGGTTCGATGGGGCGAACTATCTTAGCGAACTGACGGAAAAAGAGATTAGCCTGTGGCGCAATGGCCTAAACAGCGTCGAAGATTTACAGGCGAACCATATCGACGAAACCTTCACCTGGGCGCATCGTATCAGCAATCGGGCGGTGGATTTTCTGCAACAGCCTGCGCGCGCAGACGAGCCTTTCCTGATGGTGGTTTCGTATGATGAGCCGCATCACCCGTTCACCTGTCCGGTGGAGTATTTAGAGAAATACGCTGATTTTTACTACGAGCTGGGCGAGAAAGCACAGGATGACCTGGCTAACAAACCGGAACATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAATGCCTTAACGCCAGAGCAACGTGAAAATACGTGGGTTATTTATACCTCCGATCACGGCGAAATGATGGGCGCACATAAGCTGATCAGTAAAGGGGCGGCGATGTATGACGACATCACCCGCATTCCGCTGATCATCCGTTCGCCGCAAGGGGAGCGGCGACAGGTCGATACGCCAGTCAGTCATATCGATTTACTGCCGACAATGATGGCGCTGGCAGATATTGAAAAACCAGAGATTCTGCCGGGGGAAAATATCCTTGCCGTGAAAGAGCCACGCGGCGTGATGGTGGAATTTAACCGCTACGAGATTGAGCATGACAGCTTTGGCGGTTTTATTCCGGTGCGTTGCTGGGTGACGGATGACTTTAAACTGGTACTCAACCTCTTCACCAGTGATGAACTTTACGATCGCCGTAATGACCCAAATGAAATGCATAACCTGATCGATGATATCCGTTTTGCAGACGTTCGCAGCAAAATGCATGACGCCTTATTGGATTACATGGACAAAATTCGCGATCCGTTCCGCAGTTACCAATGGAGTCTGCGTCCGTGGCGTAAAGATGCACGGCCGCGCTGGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGA", + "dna_sequence_length": 1494, + "functions": [ + "sulfatase/phosphatase superfamily protein" + ], + "id": "CDS_3627", + "location": [ + [ + "NC_000913", + 3858404, + "-", + 1494 + ] + ], + "md5": "d1c6a877db0aac2c71a8916dbfb12f02", + "parent_gene": "", + "protein_md5": "f307558a86aefc0bfcb976cd0d5b8f60", + "protein_translation": "MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF", + "protein_translation_length": 497, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012026" + ], + [ + "gene_synonym", + "ECK3670" + ], + [ + "gene_synonym", + "EcoGene:EG11706" + ], + [ + "gene_synonym", + "GI:16131549" + ], + [ + "gene_synonym", + "GeneID:948185" + ], + [ + "gene_synonym", + "JW3655" + ], + [ + "gene_synonym", + "NP_418135.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31448" + ], + [ + "gene_synonym", + "b3679" + ], + [ + "gene_synonym", + "yidK" + ] + ], + "dna_sequence": "ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTGGCGGTGATCACCTGGTGGAAGGTCCGCAAAACAGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGCTAACCAACCTTTCCACGGAACAACTGGTCGGCCTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTGACTTCAGCGGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGCGGCATTGCCACCATCCCCGATTTTCTGGAGGAACGTTATGATAAAACGACGCGTATTATCATCGACTTCTGCTTCCTAATTGCCACCGGCGTCTGCTTTCTGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCACGTCGGGGAATCGCTACAGATTTCTCACGGTGCGGCTATCTGGCTACTGGTAATTTTGCTTGGTCTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGCAGTGGCGGACTCCATCAACGGTATTGGGCTGGTTATCGGCGGGTTGATGGTGCCGGTATTTGGCCTAATCGCGATGGGCAAGGGCAGCTTTATGCAGGGCATTGAGCAACTCACCACCGTTCACGCCGAGAAATTAAACTCAATCGGTGGCCCGACCGATCCCTTGCCGATTGGCGCGGCATTTACCGGTTTGATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCAACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGCTGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATTTACCGAAAGCCGACATGGCCTACCCGACGCTGGTCAATAACGTTCTGCCAGTGCCAATGGTGGGTTTCTTCGGCGCGGTGTTATTTGGTGCGGTGATCAGTACCTTCAACGGCTTTCTGAATAGCGCCAGTACGTTATTCAGTATGGGTATTTACCGTCGCATCATTAACCAGAATGCCGAGCCGCAGCAGCTGGTCACCGTCGGGCGCAAATTTGGTTTCTTTATCGCTATCGTTTCGGTGCTGGTCGCGCCGTGGATCGCCAACGCGCCGCAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGCATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTTCTTCCCGCGCATCCCGGCGCTGGCGGCAAAAGTAGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGGTGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGGTGATCGGTTTTATCAAACCGCGCGCCACGCCGTTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATCGCGTCAATTGGCATCCTGTTCGCGATGATTGGCGTCTATGCCGGGCTGGCTGAATTCGGCGGCTACGGTACGCGCTGGTTAGCGATGATCAGTTATTTCATTGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCCGTAACCTTTACTCCCGACGGGAAGGATAGCCTATGA", + "dna_sequence_length": 1716, + "functions": [ + "putative transporter" + ], + "id": "CDS_3628", + "location": [ + [ + "NC_000913", + 3860116, + "-", + 1716 + ] + ], + "md5": "29a4b93b37d34478d7331d32fe5f5f5e", + "parent_gene": "", + "protein_md5": "2f255d2b1caefd12af40e5ea13c5d380", + "protein_translation": "MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL", + "protein_translation_length": 571, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012034" + ], + [ + "gene_synonym", + "ECK3671" + ], + [ + "gene_synonym", + "EcoGene:EG11707" + ], + [ + "gene_synonym", + "GI:226524758" + ], + [ + "gene_synonym", + "GeneID:948186" + ], + [ + "gene_synonym", + "JW3656" + ], + [ + "gene_synonym", + "NP_418136.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31449" + ], + [ + "gene_synonym", + "b3680" + ], + [ + "gene_synonym", + "yidL" + ] + ], + "dna_sequence": "ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCGGGACAAGAAGAAACCGCTTATCGCCAACTCATGGGTTGCGGTGTATACCGTACAAGGATGTGGGAAAATTCTTTTAAAGAATGGCGAACAAATAACACTGCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTATGTACGCAGATGGTAAAAAAGATCCACAACGGCGGCAAATTGAAAAATTAATTGCCACTTTACATGCCAGTCTGCAACAACGCTGGAGCGTAGCTGATATGGCTGCCACGATCCCCTGTAGCGAAGCCTGGTTGCGTCGTCTGTTTTTACGCTATACCGGCAAGACGCCGAAAGAATATTACCTCGATGCGCGTCTGGATCTGGCGCTATCGCTATTAAAGCAACAAGGAAACTCGGTTGGCGAAGTCGCTGATACGCTCAACTTCTTCGACTCCTTTCATTTCAGCAAAGCCTTTAAACATAAATTTGGTTATGCGCCGTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAA", + "dna_sequence_length": 894, + "functions": [ + "AraC family putative transcriptional regulator" + ], + "id": "CDS_3629", + "location": [ + [ + "NC_000913", + 3860283, + "+", + 894 + ] + ], + "md5": "7d982d28ebd2b6ad756093569703ca79", + "parent_gene": "", + "protein_md5": "539474d1ee401e3b1774cadc8e562048", + "protein_translation": "MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012036" + ], + [ + "gene_synonym", + "ASAP:ABE-0285077" + ], + [ + "gene_synonym", + "ECK3673" + ], + [ + "gene_synonym", + "EcoGene:EG11708" + ], + [ + "gene_synonym", + "GeneID:1450301" + ], + [ + "gene_synonym", + "JW3658" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31450" + ], + [ + "gene_synonym", + "b4556" + ], + [ + "gene_synonym", + "glvG" + ], + [ + "gene_synonym", + "yidM" + ], + [ + "gene_synonym", + "ysdC" + ] + ], + "dna_sequence": "ATGACCAAATTCTCAGTGGTTGTCGCAGGCGGTGGAAGCACCTTTACGCCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGAAGCCTGTAAAGTCATCCTTAAAGAAAAAGCGCCGGACATTGCGTTTAGTTACACCACCGATCCTGAAGTGGCATTCAGCGACGTTGATTTTGTCATGGCGCACATCCGCGTCGGCAAATACCCGATGCGCGAACTGGATGAAAAAATCCCGCTGCGCCACGGCGTTGTTGGTCAGGAAACTTGCGGACCCGGCGGAATAGCGTACGGCATGCGTTCCATTGGCGGCGTCCTGGAACTGGTGGATTATATGGAAAAATATTCACCAAATGCCTGGATGCTCAACTACTCCAACCCGGCAGCCATTGTCGCAGAAGCCACGCGTCGTCTGCGCCCGAATGCGAAAATCCTCAACATCTGTGACATGCCAATCGGTATTGAAAGCCGGATGGCGCAAATTGTTGGGCTGCAAGATCGCAAACAGATGCGCGTGCGCTACTACGGCCTGAACCACTGGTGGTCGGCGATATCCCGCAGTTTCAGAAAGGGTTAATGAGTCAGCAAGTGGCGGTGGAAAAACTGGTCGTGGACGCCTGGGAACAGCGTTCATATCAGCACCTGTGGCAGGCGATTACGTTGTCGAAAACGGTACCGAGCGCCTCGGTCGCCAAAGCTATTCTGGATGAGTTGCTGGAGGCCAACAAAGCGTACTGGCCAGAGTTACGTTAA", + "dna_sequence_length": 815, + "id": "CDS_3630", + "location": [ + [ + "NC_000913", + 3861987, + "-", + 815 + ] + ], + "md5": "e974a52bb8be21a29cbc27e6c50e72f1", + "parent_gene": "", + "protein_md5": "7ffec7880aae6398c43e78d7cda9125d", + "protein_translation": "MTKFSVVVAGGGSTFTPGIVLMLLANQDRFPLRALKFYDNDGARQEVIAEACKVILKEKAPDIAFSYTTDPEVAFSDVDFVMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGMRSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNAKILNICDMPIGIESRMAQIVGLQDRKQMRVRYYGLNHWWSAISRSFRKG", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012038" + ], + [ + "gene_synonym", + "ASAP:ABE-0012043" + ], + [ + "gene_synonym", + "ECK3674" + ], + [ + "gene_synonym", + "EcoGene:EG11710" + ], + [ + "gene_synonym", + "GeneID:2847721" + ], + [ + "gene_synonym", + "JW3659" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31452" + ], + [ + "gene_synonym", + "b3683" + ], + [ + "gene_synonym", + "glvB" + ], + [ + "gene_synonym", + "glvC" + ], + [ + "gene_synonym", + "yidN" + ], + [ + "gene_synonym", + "yidO" + ] + ], + "dna_sequence": "ATGCTCAGTCAAATTCAACGCTTTGGCGGCGCGATGTTCACGCCAGTGCTGCTGTTTCCCTTCGCCGGGATTGTGGTGGGTCTTGCCATCTTGCTGCAAAACCCGATGTTTGTCGGGGAATCACTGACCGATCCGAACAGTTTATTCGCGCAAATCGTACACATTATTGAAGAGGGCGGTTGGACGGTATTCCGTAATATGCCGCTGATTTTTGCTGTCGGTTTACCCATTGGCCTTGCTAAGCAAGCGCAGGGGCGTGCTTGTCTGGCGGTGATGGTGAGTTTCCTGACCTGGAACTATTTCATCAACGCGATGGGAATGACCTGGGGAAGCTACTTCGGCGTCGATTTCACTCAGGACGCGGTGGCAGGTAGCGGTCTGACAATGATGGCCGGGATTAAAACCCTCGATACCAGCATTATCGGCGCAATTATCATTTCCGGCATTGTGACGGCGCTGCATAACCGTCTGTTCGATAAAAAACTGCCGGTTTTTCTCGGCATTTTCCAGGGGACGTCTTATGTGGTGATTATCGCCTTCCTGGTGATGATCCCCTGTGCCTGGCTGACGTTGCTCGGCTGGCCAAAAGTACAAATGGGGATTGAATCTCTGCAAGCGTTCCTGCGTTCGGCGGGTGCACTTGGGGTCTGGGTTTACACCTTCCTCGAACGTATTCTGATCCCAACCGGTTTACACCACTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCCTGCACGGTAACTCAAAAATCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAATCGGGTAAAAGTGGCGGGCTTGCTGATTCCCGCAACCTTAACCGCCATGCTGGTGGGAATTACCGAACCGCTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGTTGTGCTTTACCCTGCTGTACTTCGTGGTTTTCCGCACACTGATTCTGCAGTTCAACATGTGCACGCCGGGACGTGAAGATGCGGAAGTGAAACTCTACTCAAAAGCCGAATACAAAGCCTCGCGAGGCCAAACCACCGCGGCAGAGCCAAAAAAAGAGCTGGATCAGGCTGCCGGTATCCTGCAAGCCCTGGGCGGGGTCGGCAATATCTCCAGCATTAACAATTGCGCGACGCGTTTACGTATTGCACTGCATGACATGTCACAAACGCTGGATGACGAAGTCTTTAAAAAGCTGGGAGCGCACGGCGTCTTCCGTAGTGGCGATGCCATTCAGGTGATCATTGGTCTGCATGTATCTCAGCTGCGTGAACAGCTCGATAGCTTAATTAATTCTCATCAATCAGCAGAAAATGTTGCCATTACGGAGGCAGTATAA", + "dna_sequence_length": 1617, + "id": "CDS_3631", + "location": [ + [ + "NC_000913", + 3863603, + "-", + 1617 + ] + ], + "md5": "59c420846bdb1035eba86bd6b9beaa16", + "parent_gene": "", + "protein_md5": "3a2dd06bf32c23d6bb70553efb470d51", + "protein_translation": "MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLID", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012049" + ], + [ + "gene_synonym", + "ECK3676" + ], + [ + "gene_synonym", + "EcoGene:EG11711" + ], + [ + "gene_synonym", + "GI:16131552" + ], + [ + "gene_synonym", + "GeneID:948194" + ], + [ + "gene_synonym", + "JW3661" + ], + [ + "gene_synonym", + "NP_418139.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31453" + ], + [ + "gene_synonym", + "b3684" + ], + [ + "gene_synonym", + "yidP" + ] + ], + "dna_sequence": "ATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCTGGTGGTCCGCCGCCACGGTAGTGGCACTTACCTGGTGCGCAAAGATGTACTGCATCAAACCGCCAGTCTGACCGGGCTGGTGGAGGTGTTAAAACGGCAGGGAAAAACGGTCACCAGCCAGGTGCTGATTTTTGAAATCATGCCTGCGCCTCCGGCCATTGCCAGCCAGTTACGGATTCAAATCAACGAGCAGATCTACTTCTCCCGTCGCGTTCGTTTTGTGGAAGGGAAACCGCTGATGCTGGAAGACAGCTATATGCCGGTAAAACTGTTCCGTAATCTTTCGCTGCAACATCTGGAAGGGTCGAAGTTTGAATATATTGAACAAGAGTGCGGGATTTTGATTGGCGGTAATTATGAAAGCCTGACGCCAGTGCTCGCCGATAGACTGCTGGCGCGGCAAATGAAGGTAGCGGAACACACGCCACTGCTGCGGATCACCTCGTTGTCATATAGCGAGAGCGGGGAGTTTTTGAATTATTCAGTGATGTTCAGAAATGCCAGCGAATACCAGGTGGAGTACCATTTACGGCGACTCCACCCGGAAAAGAGTTAA", + "dna_sequence_length": 717, + "functions": [ + "UTRA domain-containing GntR family putative transcriptional regulator" + ], + "id": "CDS_3632", + "location": [ + [ + "NC_000913", + 3863899, + "+", + 717 + ] + ], + "md5": "550fa76f235e9cff3208a5dec861c9df", + "parent_gene": "", + "protein_md5": "fcc0eb97f3b7f64b10af74d7f79c97a2", + "protein_translation": "MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMPAPPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEYIEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMFRNASEYQVEYHLRRLHPEKS", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012051" + ], + [ + "gene_synonym", + "ECK3677" + ], + [ + "gene_synonym", + "EcoGene:EG11536" + ], + [ + "gene_synonym", + "GI:90111636" + ], + [ + "gene_synonym", + "GeneID:948193" + ], + [ + "gene_synonym", + "JW3662" + ], + [ + "gene_synonym", + "NP_418140.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60872" + ], + [ + "gene_synonym", + "b3685" + ], + [ + "gene_synonym", + "yibE" + ], + [ + "gene_synonym", + "yidE" + ] + ], + "dna_sequence": "ATGAGTGATATAGCATTAACGGTCAGTATTCTGGCTTTGGTGGCAGTCGTCGGTTTGTTTATCGGCAACGTCAAATTTCGCGGCATAGGATTAGGTATTGGCGGCGTGCTGTTTGGTGGGATCATCGTCGGCCATTTTGTTTCTCAGGCGGGGATGACATTAAGTAGCGATATGCTGCATGTTATTCAGGAATTTGGCCTGATCCTGTTCGTTTATACTATCGGGATTCAGGTAGGGCCGGGCTTCTTTGCCTCATTGCGCGTCTCCGGATTACGCCTCAACCTGTTTGCTGTTCTGATCGTCATCATCGGTGGTCTGGTTACCGCCATCCTGCATAAACTGTTTGATATTCCACTGCCGGTAGTGCTGGGGATTTTCTCCGGTGCGGTTACCAATACGCCAGCGCTGGGGGCAGGGCAGCAGATTTTGCGCGACCTGGGTACACCAATGGAAATGGTCGATCAGATGGGGATGAGTTACGCGATGGCGTATCCATTCGGCATTTGCGGGATTTTGTTCACCATGTGGATGTTGCGGGTTATTTTCCGCGTCAATGTCGAGACAGAAGCTCAGCAGCACGAGTCTTCACGCACCAATGGCGGCGCGCTGATCAAGACTATCAATATTCGCGTTGAGAACCCTAACCTGCATGATTTAGCCATTAAAGATGTACCGATTCTCAACGGCGACAAAATTATCTGCTCGCGTCTGAAACGCGAAGAAACCCTAAAAGTTCCTTCGCCAGATACCATTATCCAACTGGGCGATTTGCTGCATCTGGTGGGTCAGCCAGCGGATTTACATAATGCGCAACTGGTGATTGGTCAGGAGGTCGATACTTCGCTGTCCACGAAAGGCACTGATTTGCGCGTCGAGCGTGTGGTGGTCACCAATGAAAACGTGCTCGGAAAACGTATTCGCGACCTGCACTTTAAAGAACGCTATGACGTTGTTATCTCGCGCCTGAACCGTGCCGGGGTCGAACTGGTCGCCAGTGGCGATATCAGCCTGCAGTTCGGCGATATCCTCAATCTGGTGGGGCGTCCGTCCGCAATTGATGCCGTTGCCAATGTGCTGGGGAATGCGCAGCAAAAACTGCAACAGGTTCAGATGCTGCCAGTGTTTATTGGCATCGGGCTAGGCGTATTGTTAGGTTCTATTCCCGTCTTTGTGCCAGGATTCCCGGCCGCGTTGAAACTGGGGCTGGCGGGCGGACCGCTGATTATGGCGTTGATCCTCGGGCGTATCGGCAGTATCGGCAAGCTGTACTGGTTTATGCCGCCAAGCGCCAACCTCGCGCTGCGGGAGCTGGGGATCGTGCTGTTCCTCTCGGTCGTTGGTCTGAAATCTGGTGGGGATTTTGTGAATACCCTGGTCAATGGCGAAGGGCTAAGCTGGATTGGTTATGGTGCCCTGATCACCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGTGCTCTTCTGGAGTATCGGTTAA", + "dna_sequence_length": 1662, + "functions": [ + "putative transporter" + ], + "id": "CDS_3633", + "location": [ + [ + "NC_000913", + 3866273, + "-", + 1662 + ] + ], + "md5": "e45f4619a8c9afe70ffcb3ebd7ad8c5a", + "parent_gene": "", + "protein_md5": "2d6d68e3cf223c57bba82776f0b53d98", + "protein_translation": "MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSYAMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHDLAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQEVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRIITPQLLAVLFWSIG", + "protein_translation_length": 553, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012054" + ], + [ + "gene_synonym", + "ECK3678" + ], + [ + "gene_synonym", + "EcoGene:EG11535" + ], + [ + "gene_synonym", + "GI:90111637" + ], + [ + "gene_synonym", + "GeneID:948192" + ], + [ + "gene_synonym", + "JW3663" + ], + [ + "gene_synonym", + "NP_418141.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C058" + ], + [ + "gene_synonym", + "b3686" + ], + [ + "gene_synonym", + "hslS" + ], + [ + "gene_synonym", + "htpE" + ], + [ + "gene_synonym", + "ibpB" + ] + ], + "dna_sequence": "ATGCGTAACTTCGATTTATCCCCACTGATGCGTCAATGGATCGGTTTTGACAAACTGGCCAACGCACTGCAAAACGCCGGTGAAAGCCAGAGCTTCCCGCCGTACAACATTGAGAAAAGCGACGATAACCACTACCGCATTACCCTTGCGCTGGCAGGTTTCCGTCAGGAAGATTTAGAGATTCAACTGGAAGGTACGCGCCTGAGCGTAAAAGGCACGCCGGAGCAGCCAAAAGAAGAGAAAAAATGGCTGCATCAAGGGCTTATGAATCAGCCATTTAGCCTGAGCTTTACGCTGGCTGAAAATATGGAAGTCTCTGGCGCAACCTTCGTAAACGGTTTACTGCATATTGATTTAATTCGTAATGAGCCTGAACCCATCGCAGCGCAGCGTATCGCTATCAGCGAACGTCCCGCGTTAAATAGCTAA", + "dna_sequence_length": 429, + "functions": [ + "heat shock chaperone" + ], + "id": "CDS_3634", + "location": [ + [ + "NC_000913", + 3866897, + "-", + 429 + ] + ], + "md5": "b159996977bec26d026491a9692dd297", + "parent_gene": "", + "protein_md5": "2268f4daf4bf7885738375c940773157", + "protein_translation": "MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENMEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012058" + ], + [ + "gene_synonym", + "ECK3679" + ], + [ + "gene_synonym", + "EcoGene:EG11534" + ], + [ + "gene_synonym", + "GI:16131555" + ], + [ + "gene_synonym", + "GeneID:948200" + ], + [ + "gene_synonym", + "JW3664" + ], + [ + "gene_synonym", + "NP_418142.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C054" + ], + [ + "gene_synonym", + "b3687" + ], + [ + "gene_synonym", + "hslT" + ], + [ + "gene_synonym", + "htpN" + ], + [ + "gene_synonym", + "ibpA" + ] + ], + "dna_sequence": "ATGCGTAACTTTGATTTATCCCCGCTTTACCGTTCTGCTATTGGATTTGACCGTTTGTTTAACCACTTAGAAAACAACCAGAGCCAGAGTAATGGCGGCTACCCTCCGTATAACGTTGAACTGGTAGACGAAAACCATTACCGCATTGCTATCGCTGTGGCTGGTTTTGCTGAGAGCGAACTGGAAATTACCGCCCAGGATAATCTGCTGGTGGTGAAAGGTGCTCACGCCGACGAACAAAAAGAGCGCACCTATCTGTACCAGGGCATCGCTGAACGCAACTTTGAACGCAAATTCCAGTTAGCTGAGAACATTCATGTTCGTGGTGCTAACCTGGTAAATGGTTTGCTGTATATCGATCTCGAACGCGTGATTCCGGAAGCGAAAAAACCGCGCCGTATCGAAATCAACTAA", + "dna_sequence_length": 414, + "functions": [ + "heat shock chaperone" + ], + "id": "CDS_3635", + "location": [ + [ + "NC_000913", + 3867422, + "-", + 414 + ] + ], + "md5": "21942e4db460143b15c5e5d802453453", + "parent_gene": "", + "protein_md5": "6bb27f9960fa9182d82beeeeb4bc8a5c", + "protein_translation": "MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012063" + ], + [ + "gene_synonym", + "ECK3680" + ], + [ + "gene_synonym", + "EcoGene:EG11712" + ], + [ + "gene_synonym", + "GI:90111638" + ], + [ + "gene_synonym", + "GeneID:948199" + ], + [ + "gene_synonym", + "JW5633" + ], + [ + "gene_synonym", + "NP_418143.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADM4" + ], + [ + "gene_synonym", + "b3688" + ], + [ + "gene_synonym", + "ecfI" + ], + [ + "gene_synonym", + "yidQ" + ] + ], + "dna_sequence": "ATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGCGCCAGCGCAACCATGATTGGCGACGATGAAACCAACTGGGGCACTAAGTCGCTGGCGATTCTCGATATGCCGTTTACCGCTGTGATGGACACGCTTTTACTGCCGTGGGATGTGTTCCGCAAAGACAGCTCGGTGCGCTCGCGCGTTGAAAAAAGCGAAGCCAACGCGCAAGCCACCAATGCGGTTATTCCACCGGCCAGAATGCCTGATAACTGA", + "dna_sequence_length": 333, + "functions": [ + "DUF1375 family outer membrane protein" + ], + "id": "CDS_3636", + "location": [ + [ + "NC_000913", + 3867728, + "+", + 333 + ] + ], + "md5": "4fb41b22fc538e7420e6fccc1d7a2e6e", + "parent_gene": "", + "protein_md5": "4dd786d3f534a35c3fbd91e656d277f4", + "protein_translation": "MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVIPPARMPDN", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012065" + ], + [ + "gene_synonym", + "ECK3681" + ], + [ + "gene_synonym", + "EcoGene:EG11713" + ], + [ + "gene_synonym", + "GI:308209622" + ], + [ + "gene_synonym", + "GeneID:948198" + ], + [ + "gene_synonym", + "JW5860" + ], + [ + "gene_synonym", + "NP_418144.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31455" + ], + [ + "gene_synonym", + "b3689" + ], + [ + "gene_synonym", + "yidR" + ] + ], + "dna_sequence": "ATGGCGGGACCCGTTTTGTATCAGGACCGCGCCATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGCGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGCGCGTCACAGGGCGCACACGTCGGCGTGGTGACCGTTCATCCGAAGTCAGAGAAATATGTTTTCATCCACGGCCCGGAAAATCCTGATGAAACATGGCATTACGACTTCCATCATCGGCGCGGAGTGATTGTTGAAGGCGGCAAGATGAGTAACCTTGATGCGATGGATATTACCGCGCCGTATACGCCAGGAGTGCTGCGCGGCGGCAGCCATGTGCATGTCTTTAGCCCGAACGGTGAAAGGGTGAGCTTTACCTATAACGACCATGTAATGCATGAACTCGATCCGGCGCTGGATTTGCGAAACGTCGGTGTTGCTGCGCCGTTTGGCCCGGTCAACGTACAAAAGCAGCATCCGCGTGAATACAGCGGTAGCCACTGGTGCGTGCTGGTGAGCAAAACCACGCCCACGCCACAGCCTGGCAGTGATGAAATCAATCGTGCTTATGAAGAAGGATGGGTAGGAAATCACGCGCTGGCATTTATTGGCGACACACTTTCGCCAAAGGGCGAGAAAGTGCCGGAGCTGTTTATCGTTGAGTTACCGCAAGATGAAGCTGGCTGGAAAGCGGCAGGTGATGCGCCGTTAAGCGGAACGGAAACAACCCTGCCCGCGCCACCGCGTGGCGTCGTGCAGCGACGTTTAACCTTTACCCACCATCGGGCTTATCCGGGGTTAGTCAACGTCCCGCGCCACTGGGTGCGCTGTAATCCGCAGGGTACACAAATCGCGTTTTTAATGCGAGATGATAACGGCATTGTGCAACTGTGGCTTATCTCGCCACAGGGCGGCGAGCCGCGCCAGTTAACCCATAACAAAACGGATATTCAGTCTGCATTTAACTGGCATCCGTCAGGAGAATGGTTGGGCTTTGTGCTGGATAATCGAATTGCTTGTGCCCATGCGCAAAGCGGCGAGGTTGAGTATTTAACCGAACACCACGCCAATTCACCTTCTGCGGACGCCGTGGTCTTCTCGCCGGATGGTCAGTGGCTGGCGTGGATGGAAGGCGGCCAGCTGTGGATCACCGAAACTGATCGCTAA", + "dna_sequence_length": 1248, + "functions": [ + "DUF3748 family protein" + ], + "id": "CDS_3637", + "location": [ + [ + "NC_000913", + 3869309, + "-", + 1248 + ] + ], + "md5": "97444806520cc39c2932c606ebd5ad11", + "parent_gene": "", + "protein_md5": "4e79cb3acfefc9b5d976d6244af121c2", + "protein_translation": "MAGPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQLWITETDR", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012068" + ], + [ + "gene_synonym", + "ECK3682" + ], + [ + "gene_synonym", + "EcoGene:EG11714" + ], + [ + "gene_synonym", + "GI:90111640" + ], + [ + "gene_synonym", + "GeneID:948197" + ], + [ + "gene_synonym", + "JW5631" + ], + [ + "gene_synonym", + "NP_418145.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31456" + ], + [ + "gene_synonym", + "b3690" + ], + [ + "gene_synonym", + "cbrA" + ], + [ + "gene_synonym", + "yidS" + ] + ], + "dna_sequence": "ATGGAACATTTCGACGTGGCGATTATTGGCCTCGGCCCGGCAGGATCGGCGTTGGCACGAAAGTTAGCAGGCAAAATGCAGGTGATCGCGCTGGATAAAAAGCACCAGTGTGGTACTGAAGGTTTCAGCAAACCCTGCGGCGGTCTGCTGGCACCGGACGCGCAGCGATCTTTTATTCGCGATGGGCTGACGCTTCCTGTCGATGTGATCGCTAATCCGCAGATTTTCAGCGTCAAAACCGTCGACGTCGCCGCATCGCTCACGCGTAACTACCAGCGAAGCTATATCAATATTAATCGCCATGCTTTCGACTTGTGGATGAAATCGCTGATCCCCGCCAGCGTTGAGGTTTATCACGACAGCCTGTGCCGAAAAATCTGGCGTGAGGATGATAAATGGCATGTCATTTTTCGTGCAGACGGCTGGGAGCAACATATTACCGCCCGCTATCTGGTCGGTGCCGATGGCGCAAACTCGATGGTGCGGCGACATCTCTACCCGGATCATCAAATCCGTAAATATGTCGCTATCCAGCAGTGGTTCGCGGAGAAACATCCGGTGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCCCTCGCGCTGGCAGGATTTTGTCTGCGGTAAGGACAACGCCTTTCTGATTGGTGAAGCGGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGTTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAG", + "dna_sequence_length": 1065, + "functions": [ + "colicin M resistance protein", + "FAD-binding protein, putative oxidoreductase" + ], + "id": "CDS_3638", + "location": [ + [ + "NC_000913", + 3869377, + "+", + 1065 + ] + ], + "md5": "e1e498892ecf9d337e3b2be3e079065e", + "parent_gene": "", + "protein_md5": "e30bfea69bd86995c224ab21c5a7ec01", + "protein_translation": "MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSTDILRSVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKD", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012072" + ], + [ + "gene_synonym", + "ECK3683" + ], + [ + "gene_synonym", + "EcoGene:EG11715" + ], + [ + "gene_synonym", + "GI:90111641" + ], + [ + "gene_synonym", + "GeneID:948196" + ], + [ + "gene_synonym", + "JW5859" + ], + [ + "gene_synonym", + "NP_418146.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA76" + ], + [ + "gene_synonym", + "b3691" + ], + [ + "gene_synonym", + "dgoT" + ], + [ + "gene_synonym", + "yidT" + ] + ], + "dna_sequence": "ATGGATATTCCCGTTAATGCAGCAAAGCCGGGGCGTCGGCGTTATCTGACGCTGGTGATGATCTTTATTACGGTAGTCATTTGTTATGTCGACCGCGCCAACCTGGCCGTGGCTTCCGCCCATATTCAGGAAGAGTTCGGCATTACCAAAGCGGAAATGGGCTATGTATTTTCGGCCTTCGCCTGGCTTTATACGCTATGTCAGATCCCCGGCGGTTGGTTTTTAGATCGCGTAGGTTCTCGCGTGACTTATTTTATTGCGATATTTGGCTGGTCAGTGGCGACTTTATTCCAGGGCTTTGCCACGGGCTTAATGTCATTAATTGGTCTGCGCGCGATAACCGGTATTTTCGAAGCGCCTGCTTTCCCGACCAATAACCGGATGGTGACCAGCTGGTTCCCGGAACATGAACGCGCTTCTGCCGTTGGTTTTTATACGTCTGGTCAGTTTGTCGGTCTGGCGTTTCTGACGCCGCTGCTGATCTGGATTCAGGAGATGTTGAGCTGGCACTGGGTGTTCATTGTCACTGGTGGTATCGGCATTATCTGGTCGCTGATTTGGTTTAAGGTTTATCAGCCGCCGCGCCTGACCAAAGGTATCAGCAAAGCTGAACTGGATTACATTCGTGATGGCGGCGGTCTGGTGGATGGTGATGCGCCGGTGAAGAAAGAGGCGCGTCAGCCGTTAACAGCCAAAGACTGGAAACTGGTGTTCCATCGTAAACTGATCGGCGTTTATCTTGGGCAATTTGCGGTGGCTTCTACACTGTGGTTTTTCTTAACCTGGTTCCCGAACTATTTAACCCAGGAAAAAGGAATCACGGCGCTGAAAGCAGGCTTTATGACCACGGTGCCATTCCTCGCGGCGTTTGTCGGCGTCCTGCTCTCTGGCTGGGTAGCGGATCTGCTGGTACGTAAGGGCTTTTCACTGGGCTTTGCGCGTAAAACGCCGATTATCTGCGGCTTGCTGATCTCCACCTGCATTATGGGCGCTAACTACACTAACGATCCGATGATGATTATGTGCCTGATGGCGCTGGCATTCTTCGGTAACGGTTTTGCTTCGATTACCTGGTCGCTGGTTTCTTCTCTGGCACCGATGCGCCTGATTGGTTTAACCGGCGGCGTGTTTAACTTCGCCGGTGGTCTGGGCGGCATCACCGTTCCGCTGGTGGTGGGGTACCTGGCGCAGGGTTACGGTTTCGCACCTGCACTGGTTTATATCTCCGCCGTCGCGTTGATTGGCGCGCTCTCTTATATCCTGCTGGTGGGCGATGTGAAGCGCGTTGGCTAA", + "dna_sequence_length": 1293, + "functions": [ + "D-galactonate transporter" + ], + "id": "CDS_3639", + "location": [ + [ + "NC_000913", + 3871730, + "-", + 1293 + ] + ], + "md5": "b1173588b8536ad4fd961dfeb24d2bfc", + "parent_gene": "", + "protein_md5": "09650e1c79f207c95b3adde3b3baf50f", + "protein_translation": "MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAPAFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHRKLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFVGVLLSGWVADLLVRKGFSLGFARKTPIICGLLISTCIMGANYTNDPMMIMCLMALAFFGNGFASITWSLVSSLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYGFAPALVYISAVALIGALSYILLVGDVKRVG", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174106" + ], + [ + "gene_synonym", + "ECK3684" + ], + [ + "gene_synonym", + "EcoGene:EG20050" + ], + [ + "gene_synonym", + "GI:49176390" + ], + [ + "gene_synonym", + "GeneID:2847765" + ], + [ + "gene_synonym", + "JW5629" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF17" + ], + [ + "gene_synonym", + "YP_026237.1" + ], + [ + "gene_synonym", + "b4478" + ], + [ + "gene_synonym", + "dgoD" + ], + [ + "gene_synonym", + "yidU" + ] + ], + "dna_sequence": "ATGAAAATCACCAAAATTACCACGTATCGTTTACCTCCCCGCTGGATGTTCCTGAAAATTGAAACCGATGAAGGCGTGGTCGGTTGGGGCGAGCCCGTGATCGAAGGCCGCGCCCGTACGGTGGAAGCGGCAGTTCACGAGCTGGGTGACTATTTGATTGGTCAGGATCCATCGCGCATCAATGACTTATGGCAAGTGATGTATCGCGCCGGATTCTATCGCGGCGGTCCGATCCTGATGAGCGCCATCGCCGGGATTGACCAGGCGTTATGGGATATCAAAGGTAAAGTGCTGAATGCGCCGGTCTGGCAACTGATGGGCGGCCTGGTTCGCGACAAAATTAAAGCCTACAGTTGGGTTGGCGGCGATCGTCCGGCGGATGTTATCGACGGCATTAAAACGCTACGCGAAATCGGCTTCGATACCTTCAAACTGAACGGTTGTGAAGAACTGGGGCTAATTGATAACTCCCGCGCGGTAGATGCGGCGGTTAACACCGTGGCACAAATTCGTGAAGCTTTTGGCAATCAGATTGAGTTTGGTCTTGATTTCCACGGTCGCGTCAGCGCGCCGATGGCGAAAGTGCTGATTAAAGAACTGGAGCCGTATCGCCCGCTGTTTATTGAGGAGCCGGTGCTGGCGGAACAAGCCGAATACTACCCGAAACTGGCGGCACAAACGCATATTCCACTGGCGGCGGGTGAACGCATGTTCTCACGCTTCGATTTTAAACGCGTGCTGGAGGCAGGTGGTATTTCGATTCTGCAACCGGATCTCTCCCACGCGGGCGGTATTACCGAATGCTACAAAATCGCCGGAATGGCAGAAGCCTATGACGTGACCCTTGCGCCGCACTGTCCGCTCGGACCGATTGCACTGGCGGCTTGCCTGCATATCGACTTTGTTTCCTATAACGCCGTACTTCAGGAACAAAGTATGGGAATTCATTACAACAAAGGCGCGGAGTTACTCGACTTTGTGAAAAACAAAGAAGACTTCAGCATGGTCGGCGGCTTCTTTAAACCGTTAACGAAACCGGGCTTAGGCGTGGAAATCGACGAAGCTAAAGTGATTGAGTTCAGTAAAAATGCCCCGGACTGGCGTAATCCGCTCTGGCGTCATGAAGATAACAGCGTAGCAGAGTGGTAA", + "dna_sequence_length": 1149, + "functions": [ + "D-galactonate dehydratase" + ], + "id": "CDS_3640", + "location": [ + [ + "NC_000913", + 3872998, + "-", + 1149 + ] + ], + "md5": "4c43a7f5045ee27765368ca0e406c41a", + "parent_gene": "", + "protein_md5": "20f489df41748a3a8ac5f92d8bccfd75", + "protein_translation": "MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSRFDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHIDFVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEFSKNAPDWRNPLWRHEDNSVAEW", + "protein_translation_length": 382, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174107" + ], + [ + "gene_synonym", + "ECK3685" + ], + [ + "gene_synonym", + "EcoGene:EG11716" + ], + [ + "gene_synonym", + "GI:49176391" + ], + [ + "gene_synonym", + "GeneID:2847766" + ], + [ + "gene_synonym", + "JW5628" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BF16" + ], + [ + "gene_synonym", + "YP_026238.1" + ], + [ + "gene_synonym", + "b4477" + ], + [ + "gene_synonym", + "dgoA" + ], + [ + "gene_synonym", + "yidU" + ] + ], + "dna_sequence": "ATGCAGTGGCAAACTAAACTCCCGCTGATCGCCATTTTGCGCGGTATTACGCCCGACGAGGCGCTGGCGCATGTTGGCGCGGTGATTGACGCCGGGTTCGACGCGGTTGAAATCCCGCTGAATTCCCCACAATGGGAGCAAAGCATTCCCGCCATCGTTGATGCGTACGGCGACAAGGCGTTGATTGGCGCAGGTACGGTACTGAAACCTGAACAGGTCGATGCGCTCGCCAGGATGGGCTGTCAGCTCATCGTTACGCCCAATATCCATAGTGAAGTGATCCGCCGTGCGGTGGGCTACGGCATGACCGTCTGCCCCGGCTGCGCGACGGCGACCGAAGCCTTTACCGCGCTCGAAGCGGGCGCGCAGGCGCTGAAAATATTTCCGTCATCGGCTTTTGGTCCGCAATACATCAAAGCGTTAAAAGCGGTATTGCCATCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGATAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCGGGCAATCCGTAGAGCGCACCGCGCAGCAGGCAGCAGCATTTGTTAAGGCGTATCGAGAGGCAGTGCAATGA", + "dna_sequence_length": 618, + "functions": [ + "2-oxo-3-deoxygalactonate 6-phosphate aldolase" + ], + "id": "CDS_3641", + "location": [ + [ + "NC_000913", + 3873612, + "-", + 618 + ] + ], + "md5": "afebc8d3c8bd57ffcdae913075ca89a7", + "parent_gene": "", + "protein_md5": "b1699e64fb45a8a9bf64c0c28e9319f2", + "protein_translation": "MQWQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012076" + ], + [ + "gene_synonym", + "ECK3686" + ], + [ + "gene_synonym", + "EcoGene:EG11717" + ], + [ + "gene_synonym", + "GI:16131561" + ], + [ + "gene_synonym", + "GeneID:948207" + ], + [ + "gene_synonym", + "JW3670" + ], + [ + "gene_synonym", + "NP_418148.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31459" + ], + [ + "gene_synonym", + "b3693" + ], + [ + "gene_synonym", + "dgoK" + ], + [ + "gene_synonym", + "yidV" + ] + ], + "dna_sequence": "ATGACAGCTCGCTACATCGCAATTGACTGGGGATCGACCAATCTGCGCGCCTGGCTTTATCAGGGCGACCACTGCCTGGAGAGCAGGCAATCAGAAGCAGGCGTCACGCGCCTGAACGGAAAATCTCCGGCTGCGGTGTTAGCAGAAGTCACGACCGACTGGCGTGAAGAGAAAACGCCAGTGGTAATGGCAGGAATGGTTGGCAGCAACGTCGGCTGGAAAGTTGCACCGTATTTATCTGTTCCTGCCTGTTTTTCGTCTATTGGCGAACAATTAACGTCAGTTGGCGACAATATCTGGATTATTCCCGGATTATGTGTCTCTCATGACGATAACCACAATGTGATGCGCGGCGAAGAAACACAATTGATCGGCGCGCGAGCTCTGGCTCCTTCCTCTCTTTATGTCATGCCCGGAACCCATTGCAAATGGGTGCAGGCCGATAGCCAGCAAATCAACGATTTTCGCACCGTGATGACCGGTGAATTACATCATTTACTGTTAAATCACTCATTGATTGGCGCAGGTTTGCCGCCGCAGGAAAACTCTGCCGATGCCTTCACAGCTGGCCTTGAGCGTGGTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACACGCCATCACCCTTGTCGCCGGAACATCGCTGACCGCGCGCTACCAGCAAGCCTTTCAGGCGATGGGTTGCGACGTGACGGCGGTGGCGGGCGACACGGCATTTCAGGCTGGTATAAGGAGCATCGCTCATGCAGTGGCAAACTAA", + "dna_sequence_length": 879, + "functions": [ + "2-oxo-3-deoxygalactonate kinase" + ], + "id": "CDS_3642", + "location": [ + [ + "NC_000913", + 3874474, + "-", + 879 + ] + ], + "md5": "297cc711925b0e971af9c8a4324d85ba", + "parent_gene": "", + "protein_md5": "29cb895295a5d43d42c07c5536ce3ee3", + "protein_translation": "MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPAAVLAEVTTDWREEKTPVVMAGMVGSNVGWKVAPYLSVPACFSSIGEQLTSVGDNIWIIPGLCVSHDDNHNVMRGEETQLIGARALAPSSLYVMPGTHCKWVQADSQQINDFRTVMTGELHHLLLNHSLIGAGLPPQENSADAFTAGLERGLNTPAILPQLFEVRASHVLGTLPREQVSEFLSGLLIGAEVASMRDYVAHQHAITLVAGTSLTARYQQAFQAMGCDVTAVAGDTAFQAGIRSIAHAVAN", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174108" + ], + [ + "gene_synonym", + "ECK3687" + ], + [ + "gene_synonym", + "EcoGene:EG11718" + ], + [ + "gene_synonym", + "GI:49176392" + ], + [ + "gene_synonym", + "GeneID:2847767" + ], + [ + "gene_synonym", + "JW5627" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31460" + ], + [ + "gene_synonym", + "YP_026239.1" + ], + [ + "gene_synonym", + "b4479" + ], + [ + "gene_synonym", + "dgoR" + ], + [ + "gene_synonym", + "yidW" + ] + ], + "dna_sequence": "ATGACTCTCAATAAAACCGATCGCATTGTCATTACGCTGGGTAAACAGATCGTTCACGGCAAATACGTGCCAGGCTCGCCGCTTCCGGCTGAGGCGGAACTCTGTGAGGAGTTTGCAACCTCGCGCAACATCATCCGTGAGGTGTTCCGTTCGCTGATGGCGAAGCGGCTGATTGAAATGAAACGTTATCGCGGGGCGTTTGTGGCACCGCGTAACCAGTGGAATTACCTCGACACTGACGTACTGCAATGGGTGCTGGAAAATGACTACGACCCACGGCTTATCAGTGCCATGAGCGAAGTGCGAAATCTGGTGGAACCGGCGATTGCCCGTTGGGCAGCAGAGCGCGCGACTTCCAGCGATCTGGCGCAGATTGAATCGGCGCTGAACGAGATGATTGCCAACAATCAGGACCGCGAAGCGTTTAACGAAGCGGATATTCGCTACCACGAGGCGGTGCTGCAGTCGGTGCATAACCCGGTGTTACAGCAACTTAGCATTGCGATCAGTTCGCTGCAGCGGGCGGTTTTTGAACGAACCTGGATGGGCGATGAGGCCAACATGCCGCAAACGCTCCAGGAACATAAGGCGCTGTTCGATGCGATACGACATCAGGACGGCGATGCGGCAGAGCAGGCGGCGCTTACCATGATCGCCAGCTCGACACGAAGGTTAAAGGAAATCACATGA", + "dna_sequence_length": 690, + "functions": [ + "D-galactonate catabolism operon transcriptional repressor" + ], + "id": "CDS_3643", + "location": [ + [ + "NC_000913", + 3875160, + "-", + 690 + ] + ], + "md5": "21c75389495ea65542f47e02a25b9547", + "parent_gene": "", + "protein_md5": "763f7017b7dc4d72eba1fdff27ead134", + "protein_translation": "MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012084" + ], + [ + "gene_synonym", + "ECK3688" + ], + [ + "gene_synonym", + "EcoGene:EG11719" + ], + [ + "gene_synonym", + "GI:49176393" + ], + [ + "gene_synonym", + "GeneID:948202" + ], + [ + "gene_synonym", + "JW5858" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADM6" + ], + [ + "gene_synonym", + "YP_026240.1" + ], + [ + "gene_synonym", + "b3696" + ], + [ + "gene_synonym", + "yidX" + ] + ], + "dna_sequence": "ATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAA", + "dna_sequence_length": 657, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_3644", + "location": [ + [ + "NC_000913", + 3875438, + "+", + 657 + ] + ], + "md5": "a7e1913de989c70e63c8fc8146ea93ab", + "parent_gene": "", + "protein_md5": "3eb288760b77c59b1f530c4329ba989d", + "protein_translation": "MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012086" + ], + [ + "gene_synonym", + "ECK3689" + ], + [ + "gene_synonym", + "EcoGene:EG11195" + ], + [ + "gene_synonym", + "GI:16131565" + ], + [ + "gene_synonym", + "GeneID:948204" + ], + [ + "gene_synonym", + "JW3674" + ], + [ + "gene_synonym", + "NP_418152.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Y5" + ], + [ + "gene_synonym", + "b3697" + ], + [ + "gene_synonym", + "yidA" + ] + ], + "dna_sequence": "ATGGCTATTAAACTCATTGCTATCGATATGGATGGCACCCTTCTGCTGCCCGATCACACCATTTCACCCGCCGTTAAAAATGCGATTGCCGCAGCTCGCGCCCGTGGCGTGAATGTCGTGCTAACGACGGGTCGCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACCGCACCACGCTGTACACCGCCAACCGTGATATCAGCTACTACACGGTGCATGAATCCTTCGTTGCCACCATTCCGCTGGTGTTCTGCGAAGCGGAGAAAATGGACCCCAATACCCAGTTCCTGAAAGTGATGATGATTGATGAACCCGCCATCCTCGACCAGGCTATCGCGCGTATTCCGCAGGAAGTGAAAGAGAAATATACCGTGCTGAAAAGTGCGCCGTACTTCCTCGAAATCCTCGATAAACGCGTTAACAAAGGTACGGGGGTGAAATCACTGGCCGACGTGTTAGGTATTAAACCGGAAGAAATCATGGCGATTGGCGATCAGGAAAACGATATCGCAATGATTGAATATGCAGGCGTCGGTGTGGCGATGGATAACGCTATTCCTTCAGTGAAAGAAGTGGCGAACTTTGTCACCAAATCTAACCTTGAAGATGGCGTGGCGTTTGCTATTGAGAAGTATGTGCTGAATTAA", + "dna_sequence_length": 813, + "functions": [ + "sugar phosphate phosphatase" + ], + "id": "CDS_3645", + "location": [ + [ + "NC_000913", + 3876952, + "-", + 813 + ] + ], + "md5": "8eefe61553ee095e7c52cb54c47433ec", + "parent_gene": "", + "protein_md5": "5ead7332b2e590892871a22450e06376", + "protein_translation": "MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN", + "protein_translation_length": 270, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012089" + ], + [ + "gene_synonym", + "ECK3690" + ], + [ + "gene_synonym", + "EcoGene:EG11196" + ], + [ + "gene_synonym", + "GI:90111642" + ], + [ + "gene_synonym", + "GeneID:948212" + ], + [ + "gene_synonym", + "JW3675" + ], + [ + "gene_synonym", + "NP_418153.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09996" + ], + [ + "gene_synonym", + "b3698" + ], + [ + "gene_synonym", + "yidB" + ] + ], + "dna_sequence": "ATGGGGCTTTTTGATGAAGTTGTCGGTGCCTTTCTGAAAGGCGATGCGGGGAAATATCAGGCTATTTTAAGTTGGGTTGAGGAGCAGGGCGGCATTCAGGTGCTGCTGGAAAAACTGCAAAGTGGCGGCTTAGGGGCCATTCTCTCAACCTGGCTGAGTAATCAACAGGGCAATCAATCGGTTAGTGGCGAGCAACTGGAATCGGCGCTCGGCACAAATGCGGTGTCCGATCTCGGGCAAAAACTTGGCGTGGATACCAGTACAGCTTCCAGTTTACTGGCAGAACAATTGCCGAAGATTATTGATGCGCTCTCACCGCAAGGTGAAGTGTCACCACAAGCCAATAACGATCTGCTTTCCGCAGGCATGGAACTGCTGAAAGGGAAACTCTTCCGCTAA", + "dna_sequence_length": 399, + "functions": [ + "DUF937 family protein" + ], + "id": "CDS_3646", + "location": [ + [ + "NC_000913", + 3877465, + "-", + 399 + ] + ], + "md5": "cc36b37414ec647f9881b1e0c06347c4", + "parent_gene": "", + "protein_md5": "aa99c7f0a081476fd12576321c53e5fe", + "protein_translation": "MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012093" + ], + [ + "gene_synonym", + "Cou" + ], + [ + "gene_synonym", + "ECK3691" + ], + [ + "gene_synonym", + "EcoGene:EG10424" + ], + [ + "gene_synonym", + "GI:49176395" + ], + [ + "gene_synonym", + "GeneID:948211" + ], + [ + "gene_synonym", + "JW5625" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES6" + ], + [ + "gene_synonym", + "YP_026241.1" + ], + [ + "gene_synonym", + "acrB" + ], + [ + "gene_synonym", + "b3699" + ], + [ + "gene_synonym", + "gyrB" + ], + [ + "gene_synonym", + "himB" + ], + [ + "gene_synonym", + "hisU" + ], + [ + "gene_synonym", + "hopA" + ], + [ + "gene_synonym", + "nalC" + ], + [ + "gene_synonym", + "parA" + ], + [ + "gene_synonym", + "pcbA" + ], + [ + "gene_synonym", + "pcpA" + ] + ], + "dna_sequence": "ATGTCGAATTCTTATGACTCCTCCAGTATCAAAGTCCTGAAAGGGCTGGATGCGGTGCGTAAGCGCCCGGGTATGTATATCGGCGACACGGATGACGGCACCGGTCTGCACCACATGGTATTCGAGGTGGTAGATAACGCTATCGACGAAGCGCTCGCGGGTCACTGTAAAGAAATTATCGTCACCATTCACGCCGATAACTCTGTCTCTGTACAGGATGACGGGCGCGGCATTCCGACCGGTATTCACCCGGAAGAGGGCGTATCGGCGGCGGAAGTGATCATGACCGTTCTGCACGCAGGCGGTAAATTTGACGATAACTCCTATAAAGTGTCCGGCGGTCTGCACGGCGTTGGTGTTTCGGTAGTAAACGCCCTGTCGCAAAAACTGGAGCTGGTTATCCAGCGCGAGGGTAAAATTCACCGTCAGATCTACGAACACGGTGTACCGCAGGCCCCGCTGGCGGTTACCGGCGAGACTGAAAAAACCGGCACCATGGTGCGTTTCTGGCCCAGCCTCGAAACCTTCACCAATGTGACCGAGTTCGAATATGAAATTCTGGCGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAATATCTTCTACTTCTCCACTGAAAAAGACGGTATTGGCGTCGAAGTGGCGTTGCAGTGGAACGATGGCTTCCAGGAAAACATCTACTGCTTTACCAACAACATTCCGCAGCGTGACGGCGGTACTCACCTGGCAGGCTTCCGTGCGGCGATGACCCGTACCCTGAACGCCTACATGGACAAAGAAGGCTACAGCAAAAAAGCCAAAGTCAGCGCCACCGGTGACGATGCGCGTGAAGGCCTGATTGCGGTCGTTTCCGTGAAAGTGCCGGACCCGAAATTCTCCTCCCAGACCAAAGACAAACTGGTTTCTTCTGAGGTGAAATCGGCGGTTGAACAGCAGATGAACGAACTGCTGGCAGAATACCTGCTGGAAAACCCAACCGACGCGAAAATCGTGGTTGGCAAAATTATCGATGCTGCCCGTGCCCGTGAAGCGGCGCGTCGCGCGCGTGAAATGACCCGCCGTAAAGGTGCGCTCGACTTAGCGGGCCTGCCGGGCAAACTGGCAGACTGCCAGGAACGCGATCCGGCGCTTTCCGAACTGTACCTGGTGGAAGGGGACTCCGCGGGCGGCTCTGCGAAGCAGGGGCGTAACCGCAAGAACCAGGCGATTCTGCCGCTGAAGGGTAAAATCCTCAACGTCGAGAAAGCGCGCTTCGATAAGATGCTCTCTTCTCAGGAAGTGGCGACGCTTATCACCGCGCTTGGCTGTGGTATCGGTCGTGACGAGTACAACCCGGACAAACTGCGTTATCACAGCATCATCATCATGACCGATGCGGACGTCGACGGCTCGCACATTCGTACGCTGCTGTTGACCTTCTTCTATCGTCAGATGCCGGAAATCGTTGAACGCGGTCACGTCTACATCGCTCAGCCGCCGCTGTACAAAGTGAAGAAAGGCAAGCAGGAACAGTACATTAAAGACGACGAAGCGATGGATCAGTACCAGATCTCTATCGCGCTGGACGGCGCAACGCTGCACACCAACGCCAGTGCACCGGCATTGGCTGGCGAAGCGTTAGAGAAACTGGTATCTGAGTACAACGCGACGCAGAAAATGATCAATCGTATGGAGCGTCGTTATCCGAAAGCAATGCTGAAAGAGCTTATCTATCAGCCGACGTTGACGGAAGCTGACCTTTCTGATGAGCAGACCGTTACCCGCTGGGTGAACGCGCTGGTCAGCGAACTGAACGACAAAGAACAGCACGGCAGCCAGTGGAAGTTTGATGTTCACACCAATGCTGAGCAAAACCTGTTCGAGCCGATTGTTCGCGTGCGTACCCACGGTGTGGATACTGACTATCCGCTGGATCACGAGTTTATCACCGGTGGCGAATATCGTCGTATCTGCACGCTGGGTGAGAAACTGCGTGGCTTGCTGGAAGAAGATGCGTTTATCGAACGTGGCGAGCGTCGTCAGCCGGTAGCCAGCTTCGAGCAGGCGCTGGACTGGCTGGTGAAAGAGTCCCGTCGCGGCCTCTCCATCCAGCGTTATAAAGGTCTGGGCGAGATGAACCCGGAACAGCTGTGGGAAACCACTATGGACCCGGAAAGTCGTCGTATGCTGCGCGTTACCGTTAAAGATGCGATTGCTGCCGACCAGTTGTTCACCACGCTGATGGGCGACGCCGTTGAACCGCGCCGTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAA", + "dna_sequence_length": 2415, + "functions": [ + "DNA gyrase, subunit B" + ], + "id": "CDS_3647", + "location": [ + [ + "NC_000913", + 3880119, + "-", + 2415 + ] + ], + "md5": "14560374e6c4c040f4dbb174d4a14349", + "parent_gene": "", + "protein_md5": "162027c62ad186be3a31257d5026d55d", + "protein_translation": "MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012095" + ], + [ + "gene_synonym", + "ECK3692" + ], + [ + "gene_synonym", + "EcoGene:EG10828" + ], + [ + "gene_synonym", + "GI:16131568" + ], + [ + "gene_synonym", + "GeneID:948209" + ], + [ + "gene_synonym", + "JW3677" + ], + [ + "gene_synonym", + "NP_418155.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7H0" + ], + [ + "gene_synonym", + "b3700" + ], + [ + "gene_synonym", + "recF" + ], + [ + "gene_synonym", + "uvrF" + ] + ], + "dna_sequence": "ATGTCCCTCACCCGCTTGTTGATCCGCGATTTCCGCAACATTGAAACCGCGGATCTCGCCTTATCTCCCGGCTTTAACTTTCTGGTAGGTGCCAACGGCAGTGGCAAAACCAGCGTGCTGGAAGCCATCTATACGCTCGGCCATGGTCGGGCGTTTCGCAGTTTGCAGATTGGTCGCGTCATTCGCCATGAGCAGGAGGCGTTTGTTCTCCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAGGGCGACAGCAAAGTCCGCATCGACGGTACAGACGGGCATAAGGTCGCGGAACTGGCGCACCTGATGCCAATGCAGTTGATAACGCCAGAAGGGTTTACTTTACTCAACGGCGGCCCCAAATACAGAAGAGCATTCCTCGACTGGGGATGCTTTCACAACGAACCCGGATTTTTCACCGCCTGGAGCAATCTCAAGCGATTGCTCAAGCAGCGCAATGCGGCGCTGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGACTTTCTCTTTCCAGCGCGGCTGGGAGAAAGAGACAGAATATGCTGAGGTGCTGGAACGTAATTTTGAACGCGATCGCCAGCTAACCTACACCGCGCACGGCCCGCACAAAGCGGACTTACGCATTCGCGCCGACGGTGCGCCGGTGGAAGATACCTTATCGCGTGGGCAGCTTAAGCTGTTGATGTGCGCCTTACGTCTGGCGCAAGGAGAGTTCCTCACCCGTGAAAGCGGGCGGCGGTGTCTCTACCTGATAGATGATTTTGCCTCTGAGCTTGATGATGAGCGTCGCGGGCTGCTTGCCAGCCGCTTAAAAGCGACGCAATCACAGGTCTTTGTCAGCGCGATCAGTGCTGAACACGTTATAGACATGTCGGACGAAAATTCGAAGATGTTTACCGTGGAAAAGGGTAAAATAACGGATTAA", + "dna_sequence_length": 1074, + "functions": [ + "gap repair protein" + ], + "id": "CDS_3648", + "location": [ + [ + "NC_000913", + 3881221, + "-", + 1074 + ] + ], + "md5": "24250f8d006e235de36f2c3890742db2", + "parent_gene": "", + "protein_md5": "173eedbbfd7d0508a102b28323e83932", + "protein_translation": "MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012098" + ], + [ + "gene_synonym", + "ECK3693" + ], + [ + "gene_synonym", + "EcoGene:EG10242" + ], + [ + "gene_synonym", + "GI:16131569" + ], + [ + "gene_synonym", + "GeneID:948218" + ], + [ + "gene_synonym", + "JW3678" + ], + [ + "gene_synonym", + "NP_418156.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A988" + ], + [ + "gene_synonym", + "b3701" + ], + [ + "gene_synonym", + "dnaN" + ] + ], + "dna_sequence": "ATGAAATTTACCGTAGAACGTGAGCATTTATTAAAACCGCTACAACAGGTGAGCGGTCCGTTAGGTGGTCGTCCTACGCTACCGATTCTCGGTAATCTGCTGTTACAGGTTGCTGACGGTACGTTGTCGCTGACCGGTACTGATCTCGAGATGGAAATGGTGGCACGTGTTGCGCTGGTTCAGCCACACGAGCCAGGAGCGACGACCGTTCCGGCGCGCAAATTCTTTGATATCTGCCGTGGTCTGCCTGAAGGCGCGGAAATTGCCGTGCAGCTGGAAGGTGAACGGATGCTGGTACGCTCCGGGCGTAGCCGTTTTTCGCTGTCTACCCTGCCAGCGGCGGATTTCCCGAACCTCGATGACTGGCAGAGTGAAGTCGAATTTACCCTGCCGCAGGCAACGATGAAGCGTCTGATTGAAGCGACCCAGTTTTCTATGGCGCATCAGGACGTTCGCTATTACTTAAATGGTATGCTGTTTGAAACCGAAGGTGAAGAACTGCGCACCGTGGCAACCGACGGCCACCGTCTGGCGGTCTGTTCAATGCCAATTGGTCAATCTTTGCCAAGCCATTCGGTGATCGTACCGCGTAAAGGCGTGATTGAACTGATGCGTATGCTCGACGGCGGCGACAATCCGCTGCGCGTACAGATTGGCAGCAACAACATTCGCGCCCACGTTGGCGACTTTATCTTCACCTCCAAACTGGTGGATGGTCGCTTCCCGGATTATCGCCGCGTTCTGCCGAAGAACCCGGACAAACATCTGGAAGCTGGCTGCGATCTGCTCAAGCAGGCGTTTGCTCGCGCGGCGATTCTCTCTAACGAGAAATTCCGCGGCGTACGTCTTTATGTCAGCGAAAACCAGCTGAAAATCACCGCCAACAACCCGGAACAGGAAGAAGCGGAAGAGATCCTCGACGTTACCTATAGCGGTGCGGAGATGGAAATCGGCTTCAACGTCAGTTATGTGCTGGATGTTCTGAACGCGCTGAAATGCGAAAACGTCCGCATGATGCTGACCGATTCGGTTTCCAGCGTGCAGATTGAAGATGCGGCCAGCCAGAGCGCGGCTTATGTTGTCATGCCAATGAGACTGTAA", + "dna_sequence_length": 1101, + "functions": [ + "DNA polymerase III, beta subunit" + ], + "id": "CDS_3649", + "location": [ + [ + "NC_000913", + 3882321, + "-", + 1101 + ] + ], + "md5": "a597756bc12f4a567a64a3981f926395", + "parent_gene": "", + "protein_md5": "b8c84d6f36a917c175c68a7edb9861d4", + "protein_translation": "MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012103" + ], + [ + "gene_synonym", + "ECK3694" + ], + [ + "gene_synonym", + "EcoGene:EG10235" + ], + [ + "gene_synonym", + "GI:16131570" + ], + [ + "gene_synonym", + "GeneID:948217" + ], + [ + "gene_synonym", + "JW3679" + ], + [ + "gene_synonym", + "NP_418157.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03004" + ], + [ + "gene_synonym", + "b3702" + ], + [ + "gene_synonym", + "dnaA" + ], + [ + "gene_synonym", + "hsm-2" + ] + ], + "dna_sequence": "GTGTCACTTTCGCTTTGGCAGCAGTGTCTTGCCCGATTGCAGGATGAGTTACCAGCCACAGAATTCAGTATGTGGATACGCCCATTGCAGGCGGAACTGAGCGATAACACGCTGGCCCTGTACGCGCCAAACCGTTTTGTCCTCGATTGGGTACGGGACAAGTACCTTAATAATATCAATGGACTGCTAACCAGTTTCTGCGGAGCGGATGCCCCACAGCTGCGTTTTGAAGTCGGCACCAAACCGGTGACGCAAACGCCACAAGCGGCAGTGACGAGCAACGTCGCGGCCCCTGCACAGGTGGCGCAAACGCAGCCGCAACGTGCTGCGCCTTCTACGCGCTCAGGTTGGGATAACGTCCCGGCCCCGGCAGAACCGACCTATCGTTCTAACGTAAACGTCAAACACACGTTTGATAACTTCGTTGAAGGTAAATCTAACCAACTGGCGCGCGCGGCGGCTCGCCAGGTGGCGGATAACCCTGGCGGTGCCTATAACCCGTTGTTCCTTTATGGCGGCACGGGTCTGGGTAAAACTCACCTGCTGCATGCGGTGGGTAACGGCATTATGGCGCGCAAGCCGAATGCCAAAGTGGTTTATATGCACTCCGAGCGCTTTGTTCAGGACATGGTTAAAGCCCTGCAAAACAACGCGATCGAAGAGTTTAAACGCTACTACCGTTCCGTAGATGCACTGCTGATCGACGATATTCAGTTTTTTGCTAATAAAGAACGATCTCAGGAAGAGTTTTTCCACACCTTCAACGCCCTGCTGGAAGGTAATCAACAGATCATTCTCACCTCGGATCGCTATCCGAAAGAGATCAACGGCGTTGAGGATCGTTTGAAATCCCGCTTCGGTTGGGGACTGACTGTGGCGATCGAACCGCCAGAGCTGGAAACCCGTGTGGCGATCCTGATGAAAAAGGCCGACGAAAACGACATTCGTTTGCCGGGCGAAGTGGCGTTCTTTATCGCCAAGCGTCTACGATCTAACGTACGTGAGCTGGAAGGGGCGCTGAACCGCGTCATTGCCAATGCCAACTTTACCGGACGGGCGATCACCATCGACTTCGTGCGTGAGGCGCTGCGCGACTTGCTGGCATTGCAGGAAAAACTGGTCACCATCGACAATATTCAGAAGACGGTGGCGGAGTACTACAAGATCAAAGTCGCGGATCTCCTTTCCAAGCGTCGATCCCGCTCGGTGGCGCGTCCGCGCCAGATGGCGATGGCGCTGGCGAAAGAGCTGACTAACCACAGTCTGCCGGAGATTGGCGATGCGTTTGGTGGCCGTGACCACACGACGGTGCTTCATGCCTGCCGTAAGATCGAGCAGTTGCGTGAAGAGAGCCACGATATCAAAGAAGATTTTTCAAATTTAATCAGAACATTGTCATCGTAA", + "dna_sequence_length": 1404, + "functions": [ + "chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator" + ], + "id": "CDS_3650", + "location": [ + [ + "NC_000913", + 3883729, + "-", + 1404 + ] + ], + "md5": "1f0dc58c3e05fb84c742153dc1220b79", + "parent_gene": "", + "protein_md5": "cf87188c893421a9a13c9300b1c3cd68", + "protein_translation": "MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012115" + ], + [ + "gene_synonym", + "ECK3695" + ], + [ + "gene_synonym", + "EcoGene:EG10892" + ], + [ + "gene_synonym", + "GI:16131571" + ], + [ + "gene_synonym", + "GeneID:948216" + ], + [ + "gene_synonym", + "JW3680" + ], + [ + "gene_synonym", + "NP_418158.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7P5" + ], + [ + "gene_synonym", + "b3703" + ], + [ + "gene_synonym", + "rimA" + ], + [ + "gene_synonym", + "rpmH" + ], + [ + "gene_synonym", + "ssaF" + ] + ], + "dna_sequence": "ATGAAACGCACTTTTCAACCGTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAA", + "dna_sequence_length": 141, + "functions": [ + "50S ribosomal subunit protein L34" + ], + "id": "CDS_3651", + "location": [ + [ + "NC_000913", + 3884336, + "+", + 141 + ] + ], + "md5": "a8dd07b7c699f4972c8b5864a235038e", + "parent_gene": "", + "protein_md5": "416a808f4fc13ba68768cf7d39153fcd", + "protein_translation": "MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012117" + ], + [ + "gene_synonym", + "ECK3696" + ], + [ + "gene_synonym", + "EcoGene:EG10862" + ], + [ + "gene_synonym", + "GI:16131572" + ], + [ + "gene_synonym", + "GeneID:948215" + ], + [ + "gene_synonym", + "JW3681" + ], + [ + "gene_synonym", + "NP_418159.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7Y8" + ], + [ + "gene_synonym", + "b3704" + ], + [ + "gene_synonym", + "rnpA" + ] + ], + "dna_sequence": "GTGGTTAAGCTCGCATTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAACGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGGCATCCCCGTATCGGTCTTACAGTCGCCAAGAAAAACGTTCGACGCGCCCATGAACGCAATCGGATTAAACGTCTGACGCGTGAAAGCTTCCGTCTGCGCCAACATGAACTCCCGGCTATGGATTTCGTGGTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGA", + "dna_sequence_length": 360, + "functions": [ + "protein C5 component of RNase P" + ], + "id": "CDS_3652", + "location": [ + [ + "NC_000913", + 3884493, + "+", + 360 + ] + ], + "md5": "4b84561c4cf24b2074b737be35812e3e", + "parent_gene": "", + "protein_md5": "050763380f55e07de0b31767905958a8", + "protein_translation": "MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285078" + ], + [ + "gene_synonym", + "ECK3697" + ], + [ + "gene_synonym", + "EcoGene:EG11348" + ], + [ + "gene_synonym", + "GI:94541129" + ], + [ + "gene_synonym", + "GeneID:1450303" + ], + [ + "gene_synonym", + "JW3682" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8C8" + ], + [ + "gene_synonym", + "YP_588472.1" + ], + [ + "gene_synonym", + "b4557" + ], + [ + "gene_synonym", + "yidD" + ] + ], + "dna_sequence": "ATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGCCCTCATTCGGGTCTATCAACGCCTGATTAGTCCGCTACTCGGGCCGCATTGTCGTTTCACTCCAACCTGTTCAAGCTACGGAATTGAGGCATTGCGCAGGTTTGGAGTGATAAAAGGCAGTTGGTTGACGGTGAAACGCGTATTAAAATGCCACCCTTTACACCCTGGTGGTGACGATCCCGTCCCGCCCGGACCATTTGATACCAGAGAACACTAA", + "dna_sequence_length": 258, + "functions": [ + "membrane protein insertion efficiency factor, UPF0161 family inner membrane protein" + ], + "id": "CDS_3653", + "location": [ + [ + "NC_000913", + 3884816, + "+", + 258 + ] + ], + "md5": "98d4cbaa7fe103bc46e998a63cb9fafa", + "parent_gene": "", + "protein_md5": "a8a802f0d44be64679e9db985d203e64", + "protein_translation": "MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012120" + ], + [ + "gene_synonym", + "ECK3698" + ], + [ + "gene_synonym", + "EcoGene:EG11197" + ], + [ + "gene_synonym", + "GI:16131573" + ], + [ + "gene_synonym", + "GeneID:948214" + ], + [ + "gene_synonym", + "JW3683" + ], + [ + "gene_synonym", + "NP_418161.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25714" + ], + [ + "gene_synonym", + "b3705" + ], + [ + "gene_synonym", + "yidC" + ] + ], + "dna_sequence": "ATGGATTCGCAACGCAATCTTTTAGTCATCGCTTTGCTGTTCGTGTCTTTCATGATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCTGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGACGTATACCGACGCGGCAGGCAACACGTTTACCAAAACGTTTGTCCTGAAACGTGGTGATTACGCTGTCAACGTCAACTACAACGTGCAGAACGCTGGCGAGAAACCGCTGGAAATCTCCTCGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTGGCGATGCTGCAACAGTATTTCGCGACGGCGTGGATCCCGCATAACGACGGTACCAACAACTTCTATACCGCTAATCTGGGTAACGGCATCGCCGCTATCGGCTATAAATCTCAGCCGGTACTGGTTCAGCCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTATCATCATCACCTTTATCGTTCGTGGCATCATGTACCCGCTGACCAAAGCGCAGTACACCTCCATGGCGAAGATGCGTATGTTGCAGCCGAAGATTCAGGCAATGCGTGAGCGTCTGGGCGATGACAAACAGCGTATCAGCCAGGAAATGATGGCGCTGTACAAAGCTGAGAAGGTTAACCCGCTGGGCGGCTGCTTCCCGCTGCTGATCCAGATGCCAATCTTCCTGGCGTTGTACTACATGCTGATGGGTTCCGTTGAACTGCGTCAGGCACCGTTTGCACTGTGGATCCACGACCTGTCGGCACAGGACCCGTACTACATCCTGCCGATCCTGATGGGCGTAACGATGTTCTTCATTCAGAAGATGTCGCCGACCACAGTGACCGACCCGATGCAGCAGAAGATCATGACCTTTATGCCGGTCATCTTCACCGTGTTCTTCCTGTGGTTCCCGTCAGGTCTGGTGCTGTACTATATCGTCAGCAACCTGGTAACCATTATTCAGCAGCAGCTGATTTACCGTGGTCTGGAAAAACGTGGCCTGCATAGCCGCGAGAAGAAAAAATCCTGA", + "dna_sequence_length": 1647, + "functions": [ + "membrane protein insertase" + ], + "id": "CDS_3654", + "location": [ + [ + "NC_000913", + 3885076, + "+", + 1647 + ] + ], + "md5": "0382757d323904352069d9109990cfb5", + "parent_gene": "", + "protein_md5": "d9725ef94d90a026d20113b1739c3cf0", + "protein_translation": "MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012123" + ], + [ + "gene_synonym", + "ECK3699" + ], + [ + "gene_synonym", + "EcoGene:EG10997" + ], + [ + "gene_synonym", + "GI:16131574" + ], + [ + "gene_synonym", + "GeneID:948222" + ], + [ + "gene_synonym", + "JW3684" + ], + [ + "gene_synonym", + "NP_418162.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25522" + ], + [ + "gene_synonym", + "b3706" + ], + [ + "gene_synonym", + "mnmE" + ], + [ + "gene_synonym", + "thdF" + ], + [ + "gene_synonym", + "trmE" + ] + ], + "dna_sequence": "ATGAGCGATAATGACACTATCGTAGCCCAGGCCACGCCTCCGGGACGTGGCGGCGTTGGCATCCTGCGCATCTCCGGCTTCAAAGCCCGTGAAGTTGCCGAAACCGTGCTGGGTAAACTGCCTAAGCCGCGCTACGCCGATTATCTTCCGTTTAAAGACGCCGACGGCAGCGTGCTCGATCAGGGGATTGCGCTATGGTTCCCTGGCCCGAACTCGTTCACCGGCGAAGATGTGCTGGAACTGCAAGGTCATGGCGGTCCGGTGATCCTCGACCTGCTGTTAAAACGCATTCTGACCATTCCCGGCCTGCGGATTGCTCGCCCTGGTGAGTTTTCCGAACGCGCGTTTCTTAACGATAAACTTGACTTAGCCCAGGCCGAGGCGATTGCCGATCTTATCGACGCCAGTTCGGAACAGGCGGCCCGTTCGGCACTTAACTCGCTGCAAGGCGCATTCTCCGCACGGGTTAATCATCTGGTAGAAGCCCTCACCCACTTGCGCATTTACGTCGAAGCGGCAATTGATTTCCCCGATGAAGAGATCGATTTCCTCTCCGACGGAAAAATTGAAGCCCAGCTCAATGACGTTATTGCCGATCTTGATGCAGTGCGTGCTGAAGCACGTCAGGGTAGTTTGTTGCGCGAAGGGATGAAAGTGGTGATTGCCGGACGTCCTAACGCCGGTAAATCGAGCCTGTTAAACGCGCTGGCGGGGCGTGAAGCGGCAATCGTAACCGATATCGCCGGAACTACGCGTGACGTGCTGCGTGAGCATATCCACATTGACGGAATGCCGCTGCATATCATCGATACCGCCGGGCTACGTGAAGCCAGTGACGAAGTAGAACGTATTGGTATCGAGCGCGCGTGGCAGGAAATTGAACAGGCCGACCGCGTGCTGTTTATGGTCGATGGCACCACAACAGACGCCGTGGATCCGGCAGAGATCTGGCCGGAATTTATTGCCCGTCTGCCAGCGAAACTGCCGATCACCGTGGTGCGCAATAAAGCCGATATCACCGGCGAAACGCTGGGAATGAGTGAAGTGAACGGTCACGCGTTAATTCGTCTCTCGGCAAGGACTGGTGAAGGCGTGGACGTGCTGCGTAACCATCTCAAACAGAGCATGGGCTTTGACACCAACATGGAAGGCGGCTTCCTGGCGCGTCGTCGCCACCTACAGGCGCTGGAACAGGCAGCGGAACATCTACAACAGGGCAAAGCGCAACTGTTGGGAGCCTGGGCAGGTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAA", + "dna_sequence_length": 1365, + "functions": [ + "tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase" + ], + "id": "CDS_3655", + "location": [ + [ + "NC_000913", + 3886828, + "+", + 1365 + ] + ], + "md5": "4cd0c9eac15bc9cda26bd11acce8da32", + "parent_gene": "", + "protein_md5": "ca47321ff276a44d263a8eea8fbb42a1", + "protein_translation": "MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK", + "protein_translation_length": 454, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012128" + ], + [ + "gene_synonym", + "ECK3700" + ], + [ + "gene_synonym", + "EcoGene:EG11276" + ], + [ + "gene_synonym", + "GI:16131575" + ], + [ + "gene_synonym", + "GeneID:948223" + ], + [ + "gene_synonym", + "JW3685" + ], + [ + "gene_synonym", + "NP_418163.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD89" + ], + [ + "gene_synonym", + "b3707" + ], + [ + "gene_synonym", + "tnaC" + ], + [ + "gene_synonym", + "tnaL" + ] + ], + "dna_sequence": "ATGAATATCTTACATATATGTGTGACCTCAAAATGGTTCAATATTGACAACAAAATTGTCGATCACCGCCCTTGA", + "dna_sequence_length": 75, + "functions": [ + "tryptophanase leader peptide" + ], + "id": "CDS_3656", + "location": [ + [ + "NC_000913", + 3888435, + "+", + 75 + ] + ], + "md5": "0943c06abee7a985236a95ac961ff78e", + "parent_gene": "", + "protein_md5": "b30ce09bc7c4b1d35e8b7ca02a233192", + "protein_translation": "MNILHICVTSKWFNIDNKIVDHRP", + "protein_translation_length": 24, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012133" + ], + [ + "gene_synonym", + "ECK3701" + ], + [ + "gene_synonym", + "EcoGene:EG11005" + ], + [ + "gene_synonym", + "GI:90111643" + ], + [ + "gene_synonym", + "GeneID:948221" + ], + [ + "gene_synonym", + "JW3686" + ], + [ + "gene_synonym", + "NP_418164.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A853" + ], + [ + "gene_synonym", + "b3708" + ], + [ + "gene_synonym", + "ind" + ], + [ + "gene_synonym", + "tnaA" + ] + ], + "dna_sequence": "ATGGAAAACTTTAAACATCTCCCTGAACCGTTCCGCATTCGTGTTATTGAGCCAGTAAAACGTACCACTCGCGCTTATCGTGAAGAGGCAATTATTAAATCCGGTATGAACCCGTTCCTGCTGGATAGCGAAGATGTTTTTATCGATTTACTGACCGACAGCGGCACCGGGGCGGTGACGCAGAGCATGCAGGCTGCGATGATGCGCGGCGACGAAGCCTACAGCGGCAGTCGTAGCTACTATGCGTTAGCCGAGTCAGTGAAAAATATCTTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACGTCTATATCAAAGAAGCCTTCGATACGGGCGTGCGTTACGACTTTAAAGGCAACTTTGACCTTGAGGGATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGGTGCCGATGGGCGGCCTGCTGTGCATGAAAGACGACAGCTTCTTTGATGTGTACACCGAGTGCAGAACCCTTTGCGTGGTGCAGGAAGGCTTCCCGACATATGGCGGCCTGGAAGGCGGCGCGATGGAGCGTCTGGCGGTAGGTCTGTATGACGGCATGAATCTCGACTGGCTGGCTTATCGTATCGCGCAGGTACAGTATCTGGTCGATGGTCTGGAAGAGATTGGCGTTGTCTGCCAGCAGGCGGGCGGTCACGCGGCATTCGTTGATGCCGGTAAACTGTTGCCGCATATCCCGGCAGACCAGTTCCCGGCACAGGCGCTGGCCTGCGAGCTGTATAAAGTCGCCGGTATCCGTGCGGTAGAAATTGGCTCTTTCCTGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAA", + "dna_sequence_length": 1416, + "functions": [ + "tryptophanase/L-cysteine desulfhydrase, PLP-dependent" + ], + "id": "CDS_3657", + "location": [ + [ + "NC_000913", + 3888730, + "+", + 1416 + ] + ], + "md5": "f5bf40c4bfb44d72efd08c083e713faa", + "parent_gene": "", + "protein_md5": "c1c007e5cd0f0bdd10897ed8ba9a91b9", + "protein_translation": "MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV", + "protein_translation_length": 471, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012135" + ], + [ + "gene_synonym", + "ECK3702" + ], + [ + "gene_synonym", + "EcoGene:EG11006" + ], + [ + "gene_synonym", + "GI:16131577" + ], + [ + "gene_synonym", + "GeneID:948220" + ], + [ + "gene_synonym", + "JW5619" + ], + [ + "gene_synonym", + "JW5622" + ], + [ + "gene_synonym", + "NP_418165.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23173" + ], + [ + "gene_synonym", + "b3709" + ], + [ + "gene_synonym", + "tnaB" + ], + [ + "gene_synonym", + "tnaP" + ], + [ + "gene_synonym", + "trpP" + ] + ], + "dna_sequence": "ATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATTGGTGGAGGTATGTTTGCTTTACCTGTTGATCTTGCCGGTGCCTGGTTTTTCTGGGGTGCCTTTATCCTTATCATTGCCTGGTTTTCAATGCTTCATTCCGGGTTATTGTTATTAGAAGCAAATTTAAATTATCCCGTCGGCTCCAGTTTTAACACCATCACCAAAGATTTAATCGGTAACACCTGGAACATTATCAGCGGTATTACCGTTGCCTTCGTTCTCTATATCCTCACTTATGCCTATATCTCTGCTAATGGTGCGATCATTAGTGAAACGATATCAATGAATTTGGGTTATCACGCTAATCCACGTATTGTCGGGATCTGCACAGCCATTTTCGTTGCCAGCGTATTGTGGTTAAGTTCGTTAGCCGCCAGTCGTATTACCTCATTGTTCCTCGGGCTGAAGATTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCACCAAACAGCACGGCATTATCGAGTTTTGCCTGCTGGTGTTCTCTAACTTAGCTGTTGCCAGTTCGTTCTTTGGTGTCACGCTGGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTGCTTGCAATCAAAGCTCGCAAGAAGTTTCCCAATCAGATGTTCACGGTCTGGGGCGGCAATCTTATTCCGGCGATTGTCATTCTCTTTGGTATAACCGTGATTTTGTGCTGGTTCGGCAACGTCTTTAACGTGTTACCTAAATTTGGCTAA", + "dna_sequence_length": 1248, + "functions": [ + "tryptophan transporter of low affinity" + ], + "id": "CDS_3658", + "location": [ + [ + "NC_000913", + 3890236, + "+", + 1248 + ] + ], + "md5": "56ea2d47be43372ff78ee4b5f9bbdccc", + "parent_gene": "", + "protein_md5": "df64ebe8b8ec4d500d40a0c866ca7893", + "protein_translation": "MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWLSSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILRDATSSTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKFG", + "protein_translation_length": 415, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012139" + ], + [ + "gene_synonym", + "ECK3703" + ], + [ + "gene_synonym", + "EcoGene:EG11720" + ], + [ + "gene_synonym", + "GI:16131578" + ], + [ + "gene_synonym", + "GeneID:948219" + ], + [ + "gene_synonym", + "JW3688" + ], + [ + "gene_synonym", + "NP_418166.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31462" + ], + [ + "gene_synonym", + "b3710" + ], + [ + "gene_synonym", + "mdtL" + ], + [ + "gene_synonym", + "yidY" + ] + ], + "dna_sequence": "ATGTCCCGCTTTTTGATTTGTAGTTTTGCCCTGGTTTTACTTTATCCCGCCGGGATTGATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGGCAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGGTGTTCTGTTCACTGGCTGAAACCAGCACGTTATTTCTTGCAGGCCGATTTCTACAGGGGTTGGGCGCAGGCTGTTGTTACGTAGTGGCGTTCGCTATTTTGCGCGACACGCTGGATGATCGACGTCGGGCTAAAGTGCTGTCATTACTCAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATAAACCACGAGAAAATAGCGAGTCGCTGCTTAACCGTTTTTTCCTCAGCCGTGTTGTTATCACCACCCTCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTTCTCGGTAGGTTTTGGTGTGGCGATGAGTCAGGCGTTAGGGCCGTTTTCATTACGCGCGGGCGTAGCCAGCTCGACCTTAGGTATTGCGCAGGTTTGCGGTTCGTCACTGTGGATTTGGCTGGCAGCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGA", + "dna_sequence_length": 1176, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_3659", + "location": [ + [ + "NC_000913", + 3891615, + "+", + 1176 + ] + ], + "md5": "1927daefec1a56c73478295f3fa9cef9", + "parent_gene": "", + "protein_md5": "3f21ff6cf1010b05b352686e724f547c", + "protein_translation": "MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKETRPAAPAASDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA", + "protein_translation_length": 391, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012141" + ], + [ + "gene_synonym", + "ECK3704" + ], + [ + "gene_synonym", + "EcoGene:EG11721" + ], + [ + "gene_synonym", + "GI:16131579" + ], + [ + "gene_synonym", + "GeneID:948227" + ], + [ + "gene_synonym", + "JW3689" + ], + [ + "gene_synonym", + "NP_418167.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31463" + ], + [ + "gene_synonym", + "b3711" + ], + [ + "gene_synonym", + "yidZ" + ] + ], + "dna_sequence": "ATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGCGGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGGCGGAATCACCGCTGATGATGATCATGCTTAATGCGCTGTCGAAACAGATCTACCAACGTTACCCGCAGGCGACCATCAAATTACGTAACTGGGATTACGATTCCTTAGATGCCATTACTCGTGGTGAAGTGGATATCGGTTTTTCCGGTCGCGAAAGCCATCCTCGCTCGCGGGAGCTGTTAAGCTCGCTACCGTTAGCCATTGATTATGAAGTGCTGTTTAGTGATGTGCCCTGCGTCTGGTTACGCAAAGATCATCCGGCACTGCATCAAACGTGGAATCTGGACACCTTCTTACGTTATCCGCATATCAGCATTTGCTGGGAACAGAGCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCGCGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAGCAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTTACGCGTCGATGGCATAA", + "dna_sequence_length": 960, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3660", + "location": [ + [ + "NC_000913", + 3892765, + "+", + 960 + ] + ], + "md5": "9ba0249aa257debdc588dfd34e449f2a", + "parent_gene": "", + "protein_md5": "50f91f29bb61437fe6b2e9c771da0216", + "protein_translation": "MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012144" + ], + [ + "gene_synonym", + "ECK3705" + ], + [ + "gene_synonym", + "EcoGene:EG11722" + ], + [ + "gene_synonym", + "GI:226524759" + ], + [ + "gene_synonym", + "GeneID:948226" + ], + [ + "gene_synonym", + "JW3690" + ], + [ + "gene_synonym", + "NP_418168.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADM8" + ], + [ + "gene_synonym", + "b3712" + ], + [ + "gene_synonym", + "yieE" + ] + ], + "dna_sequence": "ATGGCGACTCACTTTGCCCGAGGGATTTTAACGGAAGGACATCTGATTTCTGTTCGTCTCCCCTCCCAGTGTCATCAAGAAGCCCGAAACATTCCCCCTCATCGTCAAAGCCGTTTTCTGGCGTCCAGAGGTTTACTCGCAGAACTGATGTTCATGCTGTATGGCATTGGCGAATTGCCGGAAATCGTCACCCTGCCGAAAGGTAAACCGGTTTTCAGTGATAAAAATTTGCCTTCGTTTTCCATTTCCTATGCCGGGAATATGGTTGGCGTGGCGTTAACAACCGAAGGTGAATGTGGCCTCGATATGGAACTACAGCGTGCGACGCGCGGGTTTCATAGCCCACACGCGCCCGATAACCACACCTTTTCCAGCAATGAATCGCTATGGATCAGTAAACAAAACGATCCTAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGTCACGCCCACGATTGAAAAGCTCAGTGTCTGGGAGTTAGATGGCAAACACGGCTGGAAAAGCCTGCCGGATATTCACAGCCGCGCCAACAATCCTACCAGCCGGATGATGCGTTTTGCCCAACTCTCTACCGTGAAGGCTTTTTCGCCAAATTGA", + "dna_sequence_length": 750, + "functions": [ + "phosphopantetheinyl transferase superfamily protein" + ], + "id": "CDS_3661", + "location": [ + [ + "NC_000913", + 3893881, + "+", + 750 + ] + ], + "md5": "f40b66b7934626e94972cab13a5d195a", + "parent_gene": "", + "protein_md5": "771aad9222bb4ada72854819b4f785b9", + "protein_translation": "MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWKSLPDIHSRANNPTSRMMRFAQLSTVKAFSPN", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012146" + ], + [ + "gene_synonym", + "ECK3706" + ], + [ + "gene_synonym", + "EcoGene:EG11723" + ], + [ + "gene_synonym", + "GI:16131581" + ], + [ + "gene_synonym", + "GeneID:948225" + ], + [ + "gene_synonym", + "JW3691" + ], + [ + "gene_synonym", + "NP_418169.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE6" + ], + [ + "gene_synonym", + "b3713" + ], + [ + "gene_synonym", + "chrR" + ], + [ + "gene_synonym", + "yieF" + ] + ], + "dna_sequence": "ATGTCTGAAAAATTGCAGGTGGTTACGTTACTGGGGAGCCTGCGCAAAGGCTCATTTAATGGCATGGTTGCACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATGGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAA", + "dna_sequence_length": 567, + "functions": [ + "chromate reductase, Class I, flavoprotein" + ], + "id": "CDS_3662", + "location": [ + [ + "NC_000913", + 3894652, + "+", + 567 + ] + ], + "md5": "971e1134aa4110f621ddfac3023096d7", + "parent_gene": "", + "protein_md5": "ff9ecfec7cdf5b165f58df1393f56211", + "protein_translation": "MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFGEFIQRVKI", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012148" + ], + [ + "gene_synonym", + "ECK3707" + ], + [ + "gene_synonym", + "EcoGene:EG11724" + ], + [ + "gene_synonym", + "GI:16131582" + ], + [ + "gene_synonym", + "GeneID:948224" + ], + [ + "gene_synonym", + "JW3692" + ], + [ + "gene_synonym", + "NP_418170.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31466" + ], + [ + "gene_synonym", + "adeP" + ], + [ + "gene_synonym", + "b3714" + ], + [ + "gene_synonym", + "purP" + ], + [ + "gene_synonym", + "yieG" + ] + ], + "dna_sequence": "ATGAGTCATCAACATACCACCCAGACTTCTGGTCAGGGGATGCTGGAACGCGTGTTTAAACTGCGCGAACATGGCACGACGGCACGGACCGAAGTGATCGCCGGTTTTACCACCTTCCTGACGATGGTTTACATCGTTTTTGTTAACCCGCAAATTCTTGGCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCGCTTTTGTCGTTGTACAGGCGATGGGCTTGCCGTGGCAGGTCGGGATGGGCGCAATCTTCTGGGGCGCGATAGGTCTGCTGTTACTGACGATTTTCCGCGTTCGCTACTGGATGATAGCCAACATTCCGGTGAGTCTGCGTGTGGGTATTACCAGCGGTATCGGTCTGTTCATTGGCATGATGGGGCTGAAAAACGCAGGTGTGATTGTCGCTAACCCGGAAACGCTGGTGAGCATCGGTAATCTGACTTCTCACAGCGTACTTCTGGGTATCCTCGGCTTCTTCATCATTGCTATTCTGGCCTCGCGCAACATTCACGCAGCGGTGCTGGTTTCTATCGTGGTGACGACGCTGCTGGGCTGGATGCTGGGTGATGTGCACTACAATGGCATCGTTTCTGCGCCGCCGAGCGTAATGACAGTTGTGGGTCATGTAGATTTAGCCGGGTCGTTTAACCTCGGGCTGGCAGGGGTGATTTTCTCTTTCATGTTGGTCAACTTGTTTGACTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCCAGGCTACGCTGCAGCTGGTGCGCTGATTTACGTTGGCGTGCTGATGACTTCCAGTCTGGCACGCGTGAACTGGCAGGATCTTACTGAATCTGTTCCGGCGTTTATTACCGCCGTGATGATGCCGTTCAGCTTCTCGATTACCGAAGGTATCGCGCTGGGCTTTATCTCCTACTGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAA", + "dna_sequence_length": 1338, + "functions": [ + "adenine permease, high affinity", + "adenine:H+ symporter" + ], + "id": "CDS_3663", + "location": [ + [ + "NC_000913", + 3896609, + "-", + 1338 + ] + ], + "md5": "c9e28c424694c9d5caa11ce5e44e5b89", + "parent_gene": "", + "protein_md5": "b095b423c7210ed8ebb4b3b2c12cb132", + "protein_translation": "MSHQHTTQTSGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWGAIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012153" + ], + [ + "gene_synonym", + "ECK3708" + ], + [ + "gene_synonym", + "EcoGene:EG11725" + ], + [ + "gene_synonym", + "GI:16131583" + ], + [ + "gene_synonym", + "GeneID:948232" + ], + [ + "gene_synonym", + "JW3693" + ], + [ + "gene_synonym", + "NP_418171.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31467" + ], + [ + "gene_synonym", + "b3715" + ], + [ + "gene_synonym", + "yieH" + ] + ], + "dna_sequence": "ATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAGGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCTACGATATTCAGCGCTGGAAGCCAGACCCGGCGTTAATGTTCCATGCGGCAAAAGCGATGAATGTAAATGTAGAAAACTGCATTCTGGTTGATGACTCAGTTGCCGGTGCACAATCTGGTATCGACGCAGGTATGGAAGTGTTCTACTTCTGCGCCGACCCGCACAATAAGCCGATCGTTCACCCGAAAGTCACCACCTTTACCCATCTTTCGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAG", + "dna_sequence_length": 666, + "functions": [ + "phosphoenolpyruvate and 6-phosphogluconate phosphatase" + ], + "id": "CDS_3664", + "location": [ + [ + "NC_000913", + 3896774, + "+", + 666 + ] + ], + "md5": "600d1d5776c87dd39ed11e6c2c7532b2", + "parent_gene": "", + "protein_md5": "3dcaef98017591f28c391689829fd5da", + "protein_translation": "MSRIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVKLYEIIDIVSLEHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMGKLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWDITA", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012156" + ], + [ + "gene_synonym", + "ECK3709" + ], + [ + "gene_synonym", + "EcoGene:EG11726" + ], + [ + "gene_synonym", + "GI:16131584" + ], + [ + "gene_synonym", + "GeneID:948231" + ], + [ + "gene_synonym", + "JW3694" + ], + [ + "gene_synonym", + "NP_418172.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31468" + ], + [ + "gene_synonym", + "b3716" + ], + [ + "gene_synonym", + "cbrB" + ], + [ + "gene_synonym", + "yieI" + ] + ], + "dna_sequence": "ATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCGTTGTTAACCGGTGTAATGGTTGCCTGTCTGCCGGAAAAGATCGGGTCACAGAAACGTTATCGTTGTCTGGCTGGTGGCATAGGTGGCGTCGTTATCACCGAGATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAAGTTAA", + "dna_sequence_length": 468, + "functions": [ + "PRK09823 family inner membrane protein, creBC regulon" + ], + "id": "CDS_3665", + "location": [ + [ + "NC_000913", + 3897506, + "+", + 468 + ] + ], + "md5": "41f08573e3ac98915beac5694f90f38d", + "parent_gene": "", + "protein_md5": "cc4c025526dd4ed554c2fe772486b49e", + "protein_translation": "MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLWVIIHPIFLLLSITTGAIPALLTGVMVACLPEKIGSQKRYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012158" + ], + [ + "gene_synonym", + "ECK3710" + ], + [ + "gene_synonym", + "EcoGene:EG11727" + ], + [ + "gene_synonym", + "GI:16131585" + ], + [ + "gene_synonym", + "GeneID:948230" + ], + [ + "gene_synonym", + "JW3695" + ], + [ + "gene_synonym", + "NP_418173.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31469" + ], + [ + "gene_synonym", + "b3717" + ], + [ + "gene_synonym", + "cbrC" + ], + [ + "gene_synonym", + "yieJ" + ] + ], + "dna_sequence": "ATGACTCAAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTGCTGCTGAAAAGTTTGCAGGTAGTTTTCAGGATGATGCCAGCATAGAAGGTGTTGAATTTGAGTATGATGAAGAGGACGAATTTGCCGGTATTAAGAACACATATCCTGATGAAATGCTGAAAGAGTTGGTTGAACGCACGCCAGGTTATCATGGATGGCAGCAGGAATTCTGGCTCGCGCATTGTGGCGATTTCTGTGTTTTTATCGGCTATGTGGGCTGGAATGATATAAAAGATCGCCTCGATGAATTTGCCAACCTTGAAGAAGATTGTGAGAATTTCGGTATTAGAAATTCTGATCTAGCTAAATGCCTGCAAAAGGGTGGTCATTGTCAGGGTTATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAG", + "dna_sequence_length": 588, + "functions": [ + "UPF0167 family protein" + ], + "id": "CDS_3666", + "location": [ + [ + "NC_000913", + 3898022, + "+", + 588 + ] + ], + "md5": "27e09732e49735c42a1d12075bacf8a1", + "parent_gene": "", + "protein_md5": "f27f9784c59d8e932ddce32a6ca24d98", + "protein_translation": "MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLFRCLHCGKLRLWGDFS", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012160" + ], + [ + "gene_synonym", + "ECK3711" + ], + [ + "gene_synonym", + "EcoGene:EG11728" + ], + [ + "gene_synonym", + "GI:49176397" + ], + [ + "gene_synonym", + "GeneID:948229" + ], + [ + "gene_synonym", + "JW5613" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31470" + ], + [ + "gene_synonym", + "YP_026242.1" + ], + [ + "gene_synonym", + "b3718" + ], + [ + "gene_synonym", + "yieK" + ] + ], + "dna_sequence": "ATGAAATTAATCATTACCGAAGATTACCAGGAAATGAGCCGTGTCGCGGCACACCATCTGCTTGGTTATATGTCGAAGACGCGTCGTGTTAACCTGGCAATTACCGCCGGTAGCACGCCCAAAGGCATGTATGAATACCTCACCACCCTGGTTAAAGGTAAGCCCTGGTACGATAACTGCTATTTCTATAATTTTGATGAAATTCCATTTCGCGGCAAAGAGGGAGAAGGCGTAACGATTACCAATCTGCGTAATCTGTTTTTCACCCCTGCGGGGATCAAAGAAGAGAATATCCAGAAGCTCACTATTGATAACTACCGCGAGCATGATCAGAAACTGGCGCGTGAAGGCGGACTGGATTTGGTGGTGCTGGGATTAGGTGCAGATGGTCATTTTTGTGGCAATTTGCCGAATACGACCCATTTCCATGAGCAAACCGTGGAGTTCCCGATCCAGGGAGAGATGGTTGATATTGTGGCGCATGGCGAGTTGGGCGGCGACTTTTCGTTAGTGCCTGACAGCTACGTGACGATGGGGCCGAAAAGCATCATGGCGGCGAAAAACTTGCTGATAATTGTCAGCGGCGCGGGTAAAGCGCAGGCACTGAAAAATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAA", + "dna_sequence_length": 723, + "functions": [ + "putative 6-phosphogluconolactonase" + ], + "id": "CDS_3667", + "location": [ + [ + "NC_000913", + 3899393, + "-", + 723 + ] + ], + "md5": "52d8c17bb6cf171498ccc529433f2da3", + "parent_gene": "", + "protein_md5": "cf25bdeb432fb5432f7962022fb5d0ab", + "protein_translation": "MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012163" + ], + [ + "gene_synonym", + "ECK3712" + ], + [ + "gene_synonym", + "EcoGene:EG11729" + ], + [ + "gene_synonym", + "GI:145698330" + ], + [ + "gene_synonym", + "GeneID:948272" + ], + [ + "gene_synonym", + "JW5612" + ], + [ + "gene_synonym", + "NP_418175.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31471" + ], + [ + "gene_synonym", + "b3719" + ], + [ + "gene_synonym", + "yieL" + ] + ], + "dna_sequence": "ATGAATATAAAAATTGCTGCTTTAACGCTGGCTATTGCCAGCGGTATTTCTGCTCAGTGGGCCATAGCAGCGGATATGCCAGCCAGCCCGGCACCCACTATCCCGGTGAAACAGTATGTGACTCAGGTCAATGCCGATAACAGCGTGACCTTTCGCTACTTTGCCCCTGGGGCAAAAAATGTCTCTGTAGTGGTGGGTGTTCCGGTTCCGGACAATATTCACCCGATGACCAAAGACGAAGCAGGAGTCTGGTCGTGGCGCACACCTATCCTGAAAGGCAACCTGTACGAGTATTTTTTCAATGTTGATGGTGTACGCAGCATTGATACAGGCACCGCAATGACTAATCCTCAGCGCCAGGTTAACTCCAGTATGATTCTGGTGCCAGGCAGTTATCTGGATACGCGTTCTGTTGCGCATGGTGATTTGATCGCCATAACTTACCACTCCAACGCATTGCAATCTGAACGTCAGATGTATGTCTGGACCCCGCCAGGATACACCGGCATGGGCGAGCCTTTGCCAGTGCTCTATTTCTATCACGGCTTTGGTGATACCGGACGTTCCGCTATCGATCAGGGGCGTATCCCGCAAATCATGGATAACCTGCTTGCTGAAGGGAAAATTAAACCGATGCTGGTGGTGATCCCGGATACAGAAACCGATGCGAAGGGCATTATTCCCGAAGATTTCGTGCCTCAGGAAAGACGTAAAGTCTTTTATCCGCTGAATGCTAAAGCGGCAGATCGCGAACTGATGAACGATATTATCCCGCTGATTAGCAAGCGTTTTAATGTCCGTAAAGATGCCGATGGCCGCGCGCTGGCAGGGCTTTCACAAGGCGGGTACCAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACTGTGGTTGTGGGGGATAAAGATGTCGTAACCGGCAAGGATATCGCCGGGCTGAAAACTGAGCTTGAGCAGAAAAAAATTAACTTTGATTACCAGGAATATCCGGGTCTGAACCATGAAATGGATGTCTGGCGACCAGCCTATGCAGCCTTTGTACAGAAATTATTTAAATAA", + "dna_sequence_length": 1170, + "functions": [ + "putative xylanase" + ], + "id": "CDS_3668", + "location": [ + [ + "NC_000913", + 3900577, + "-", + 1170 + ] + ], + "md5": "572be87aaa1ef083dd73e240730834fb", + "parent_gene": "", + "protein_md5": "03f81822d1d4e3cfca9e61928503c5fc", + "protein_translation": "MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTNPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNHEMDVWRPAYAAFVQKLFK", + "protein_translation_length": 389, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012165" + ], + [ + "gene_synonym", + "ECK3713" + ], + [ + "gene_synonym", + "EcoGene:EG11364" + ], + [ + "gene_synonym", + "GI:16131588" + ], + [ + "gene_synonym", + "GeneID:948228" + ], + [ + "gene_synonym", + "JW3698" + ], + [ + "gene_synonym", + "NP_418176.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26218" + ], + [ + "gene_synonym", + "b3720" + ], + [ + "gene_synonym", + "bglH" + ], + [ + "gene_synonym", + "yieC" + ] + ], + "dna_sequence": "ATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAACGCCTTGAGTTATTAGAAAAGGCGTTAAGAGAAACGCAAAGCGAACTCAAAAAGTATAAAGATGAAGAGAAGAAAAAGTATACGCCAGCGACGGTGAATCGTAGCGTAAGTACGAATGATCAAGGGTATGCCGCCAATCCGTTCCCGACCAGTAGTGCCGCAAAACCTGATGCTGTACTGGTCAAAAATGAAGAGAAAAATGCCAGTGAGACAGGCTCGATTTATTCTTCCATGACTCTGAAAGATTTCAGTAAATTTGTGAAAGATGAAATTGGCTTTAGTTACAACGGCTATTACCGTTCTGGTTGGGGGACCGCCTCTCATGGTTCACCTAAATCATGGGCGATTGGTTCTCTGGGCCGCTTTGGTAACGAATACTCCGGCTGGTTTGATTTGCAGTTAAAACAACGTGTCTACAACGAAAACGGCAAACGGGTTGATGCCGTTGTGATGATGGATGGTAACGTTGGTCAGCAGTACTCTACCGGCTGGTTTGGCGATAACGCCGGTGGCGAGAACTATATGCAGTTCTCCGATATGTACGTTACCACCAAAGGTTTCCTGCCCTTTGCGCCAGAGGCTGATTTCTGGGTGGGTAAACACGGTGCGCCGAAAATTGAAATCCAGATGCTTGACTGGAAAACGCAGCGTACTGATGCCGCAGCGGGTGTAGGTCTGGAAAACTGGAAAGTCGGTCCGGGTAAAATTGATATCGCGCTGGTTCGCGAAGATGTCGATGATTACGATCGCAGCCTGCAAAACAAACAGCAGATTAATACCAATACCATTGATTTACGCTATAAAGATATCCCGTTATGGGATAAAGCCACCTTAATGGTAAGTGGTCGTTATGTCACGGCAAACGAAAGCGCATCGGAAAAAGATAATCAGGATAATAACGGGTATTATGACTGGAAAGATACCTGGATGTTTGGCACATCTTTAACGCAGAAATTTGATAAAGGTGGCTTCAACGAATTCTCCTTCCTGGTCGCGAATAACTCTATCGCCAGTAACTTTGGCCGTTATGCTGGCGCAAGTCCATTTACCACCTTTAATGGTCGTTATTATGGTGATCACACCGGCGGAACAGCGGTACGTCTGACTTCGCAGGGCGAAGCCTATATTGGCGATCATTTCATTGTAGCTAACGCGATTGTTTACTCCTTCGGTAACGATATATATAGCTACGAAACAGGCGCCCACTCTGATTTCGAATCTATTCGTGCGGTTGTTCGCCCGGCCTATATTTGGGACCAATATAACCAGACAGGTGTTGAACTGGGCTATTTCACCCAGCAAAACAAAGATGCGAATAGTAATAAATTTAATGAGTCTGGTTATAAAACCACGCTCTTCCATACCTTTAAAGTCAATACCAGTATGTTGACCTCGCGTCCGGAAATTCGTTTCTACGCCACGTATATCAAAGCCCTGGAAAACGAACTGGATGGCTTCACCTTTGAAGACAATAAAGACGACCAGTTTGCTGTCGGTGCCCAGGCTGAAATCTGGTGGTAA", + "dna_sequence_length": 1617, + "functions": [ + "carbohydrate-specific outer membrane porin, cryptic" + ], + "id": "CDS_3669", + "location": [ + [ + "NC_000913", + 3902220, + "-", + 1617 + ] + ], + "md5": "33786e398d76d5f6cf3502bbe4105903", + "parent_gene": "", + "protein_md5": "78e2581f6f02bddf54990bcb1e1e7f66", + "protein_translation": "MFRRNLITSAILLMAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWFGDNAGGENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIASNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQFAVGAQAEIWW", + "protein_translation_length": 538, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012169" + ], + [ + "gene_synonym", + "ECK3714" + ], + [ + "gene_synonym", + "EcoGene:EG10114" + ], + [ + "gene_synonym", + "GI:16131589" + ], + [ + "gene_synonym", + "GeneID:948234" + ], + [ + "gene_synonym", + "JW3699" + ], + [ + "gene_synonym", + "NP_418177.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11988" + ], + [ + "gene_synonym", + "b3721" + ], + [ + "gene_synonym", + "bglB" + ] + ], + "dna_sequence": "ATGAAAGCATTTCCAGAAACATTTCTTTGGGGTGGCGCAACAGCTGCCAATCAGGTGGAAGGTGCCTGGCAGGAAGATGGCAAAGGGATCTCGACCTCAGATTTACAGCCTCATGGCGTAATGGGAAAAATGGAACCGCGCATCCTGGGGAAAGAGAATATCAAAGATGTCGCCATCGATTTTTATCACCGTTACCCGGAAGATATCGCGTTATTTGCCGAGATGGGCTTCACCTGTCTGCGTATTTCCATTGCCTGGGCGCGAATTTTCCCTCAGGGCGACGAAGTCGAACCGAATGAAGCGGGGTTAGCGTTTTACGATCGGCTGTTTGATGAAATGGCGCAGGCGGGGATCAAGCCGCTGGTAACGTTATCCCATTACGAAATGCCATATGGGCTGGTGAAAAACTACGGCGGTTGGGCTAATCGAGCGGTCATCGATCACTTCGAGCATTACGCCCGCACGGTCTTTACTCGCTACCAACATAAAGTGGCGTTATGGCTGACGTTTAATGAAATCAACATGTCGTTACACGCGCCATTCACGGGCGTGGGGCTGGCAGAAGAGAGTGGCGAGGCGGAAGTTTATCAGGCTATCCACCATCAACTGGTTGCCAGTGCGCGGGCAGTTAAAGCCTGTCATAGCCTGCTCCCCGAAGCGAAAATCGGCAATATGCTTCTCGGTGGGCTGGTTTACCCCCTCACCTGCCAGCCACAGGATATGTTGCAGGCCATGGAAGAGAACCGGCGCTGGATGTTCTTTGGTGATGTTCAGGCGCGTGGCCAGTATCCCGGCTATATGCAGCGTTTCTTCCGCGACCACAATATCACCATTGAGATGACTGAAAGTGACGCAGAAGATTTAAAACATACCGTCGATTTCATCTCTTTTAGTTATTACATGACTGGTTGTGTTTCCCACGACGAAAGCATTAATAAAAATGCGCAGGGCAACATACTGAATATGATCCCCAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCGGTTGGATTACGGGTTCTGTTAAATACGCTTTGGGATCGTTATCAAAAACCGTTATTTATTGTCGAGAACGGATTAGGCGCAAAAGACAGCGTTGAAGCGGATGGTTCGATACAGGACGATTATCGAATTGCCTATTTAAACGATCACCTGGTACAGGTAAATGAAGCGATTGCCGATGGTGTGGATATTATGGGGTACACCAGTTGGGGGCCAATTGATTTAGTCAGTGCATCTCATTCACAAATGTCTAAGCGCTACGGCTTTATTTATGTGGATCGTGATGATAATGGCGAAGGAAGCCTCACAAGAACACGCAAGAAAAGCTTCGGATGGTATGCAGAGGTGATCAAGACGCGGGGGCTGTCATTAAAAAAAATAACCATTAAAGCACCTTAA", + "dna_sequence_length": 1413, + "functions": [ + "cryptic phospho-beta-glucosidase B" + ], + "id": "CDS_3670", + "location": [ + [ + "NC_000913", + 3903701, + "-", + 1413 + ] + ], + "md5": "04f74dda6dd43bcc16c2dbb681392aa8", + "parent_gene": "", + "protein_md5": "461baf9125b32f38e709a4fafa993169", + "protein_translation": "MKAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLSLKKITIKAP", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012171" + ], + [ + "gene_synonym", + "ECK3715" + ], + [ + "gene_synonym", + "EcoGene:EG10115" + ], + [ + "gene_synonym", + "GI:16131590" + ], + [ + "gene_synonym", + "GeneID:948236" + ], + [ + "gene_synonym", + "JW3700" + ], + [ + "gene_synonym", + "NP_418178.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08722" + ], + [ + "gene_synonym", + "b3722" + ], + [ + "gene_synonym", + "bglC" + ], + [ + "gene_synonym", + "bglF" + ], + [ + "gene_synonym", + "bglS" + ] + ], + "dna_sequence": "ATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCGCAACGCGATTACGTTTTAAATTAAAGGATGAAAGCAAAGCGCAAGCAGAGGTACTGAAAAAGACCCCCGGTATTATTATGGTGGTGGAAAGCGGTGGCCAGTTTCAGGTGGTCATAGGTAACCATGTGGCCGATGTCTTCCTGGCGGTTAACAGTGTGGCAGGCCTTGACGAAAAAGCGCAACAGGCACCGGAAAATGATGATAAAGGTAATCTGCTAAACCGCTTTGTTTATGTTATTTCAGGTATTTTTACGCCTCTGATCGGTTTGATGGCGGCAACCGGGATCTTGAAAGGTATGCTGGCTCTGGCGCTCACTTTTCAGTGGACGACCGAACAAAGTGGTACTTATTTAATTTTATTCAGCGCCAGTGATGCCTTGTTTTGGTTCTTCCCGATAATCCTGGGATACACCGCGGGGAAACGCTTCGGCGGTAATCCATTTACTGCCATGGTGATTGGTGGAGCGTTAGTGCATCCATTAATTCTGACTGCTTTCGAGAACGGGCAAAAAGCGGATGCGCTGGGGCTGGATTTCCTGGGTATTCCGGTCACATTGTTGAATTACTCGTCATCGGTTATTCCCATTATTTTTTCTGCCTGGTTGTGCAGCATTCTGGAACGCCGACTTAATGCGTGGTTACCGTCGGCAATCAAAAATTTCTTCACACCATTGCTATGTCTGATGGTTATCACACCCGTCACCTTTCTGCTGGTGGGGCCGCTATCAACCTGGATAAGCGAACTGATTGCCGCCGGTTATCTCTGGCTTTATCAGGCGGTTCCTGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGCCTGGTGCCGCTGTGTATCAATAACTTCACCGTGCTGGGCTACGACACCATGATCCCGCTGTTAATGCCCGCCATTATGGCGCAGGTCGGGGCGGCGCTCGGCGTCTTCCTCTGCGAACGCGATGCGCAGAAAAAAGTGGTGGCGGGATCAGCGGCGTTGACGAGTCTGTTTGGTATCACCGAACCAGCGGTATATGGCGTCAACCTGCCGCGTAAGTACCCCTTTGTTATCGCCTGTATCAGTGGGGCTTTGGGGGCCACCATTATTGGCTACGCGCAAACGAAAGTCTACTCCTTTGGTTTGCCAAGTATTTTCACCTTCATGCAAACCATCCCGTCAACGGGAATTGATTTCACCGTCTGGGCCAGCGTTATTGGCGGTGTCATTGCCATCGGTTGCGCATTTGTCGGTACGGTGATGCTTCATTTCATCACCGCTAAACGTCAGCCAGCGCAGGGTGCCCCGCAAGAGAAAACACCAGAGGTTATTACACCACCTGAGCAGGGCGGTATCTGTTCACCGATGACGGGAGAGATTGTGCCGCTCATTCACGTCGCTGATACCACGTTTGCCAGTGGCCTGTTGGGTAAAGGTATTGCCATTCTGCCCTCGGTTGGTGAAGTGCGTTCTCCGGTTGCGGGTCGAATTGCTTCGTTGTTCGCCACATTACACGCCATTGGCATTGAGTCAGATGATGGTGTGGAGATCCTGATTCATGTCGGTATCGACACCGTAAAACTGGACGGCAAATTCTTTTCCGCTCACGTCAACGTGGGTGACAAGGTCAATACAGGCGATCGGCTGATTTCTTTTGATATCCCTGCTATTCGCGAGGCCGGATTTGATCTGACGACGCCGGTATTAATCAGTAATAGCGATGATTTTACGGACGTATTACCCCACGGCACGGCGCAGATAAGCGCAGGTGAACCGCTGTTATCCATCATTCGCTAA", + "dna_sequence_length": 1878, + "functions": [ + "fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component" + ], + "id": "CDS_3671", + "location": [ + [ + "NC_000913", + 3905597, + "-", + 1878 + ] + ], + "md5": "a3ec4127942af062367baebc6c1f75d9", + "parent_gene": "", + "protein_md5": "7bac339cb1d6460fd61e7f58ec0a9959", + "protein_translation": "MTELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQVVIGNHVADVFLAVNSVAGLDEKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGILKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGALVHPLILTAFENGQKADALGLDFLGIPVTLLNYSSSVIPIIFSAWLCSILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAALTSLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQEKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSIIR", + "protein_translation_length": 625, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012174" + ], + [ + "gene_synonym", + "ECK3716" + ], + [ + "gene_synonym", + "EcoGene:EG10116" + ], + [ + "gene_synonym", + "GI:16131591" + ], + [ + "gene_synonym", + "GeneID:948235" + ], + [ + "gene_synonym", + "JW3701" + ], + [ + "gene_synonym", + "NP_418179.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11989" + ], + [ + "gene_synonym", + "b3723" + ], + [ + "gene_synonym", + "bglC" + ], + [ + "gene_synonym", + "bglG" + ], + [ + "gene_synonym", + "bglR" + ], + [ + "gene_synonym", + "bglS" + ] + ], + "dna_sequence": "ATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCGGGAAAAAGTCGTCATGGGGCGCGGAATTGGCTTTCAAAAACGCGCTGGCGAAAGAATTAACTCAAGTGGAATAGAAAAAGAGTATGCCTTGAGCAGTCATGAACTGAACGGGCGATTAAGCGAACTCTTAAGTCATATTCCTCTTGAGGTGATGGCAACCTGTGATCGTATTATCTCTTTAGCGCAGGAGCGCTTGGGAAAATTACAGGACAGTATTTATATCTCGCTAACTGACCATTGCCAGTTTGCGATTAAACGCTTTCAGCAAAACGTGTTGCTGCCCAACCCGTTGCTGTGGGATATCCAGCGGCTTTACCCGAAAGAGTTCCAGCTAGGGGAAGAAGCGTTAACCATTATTGATAAACGGTTGGGCGTGCAGTTACCGAAAGATGAAGTGGGCTTTATTGCCATGCATCTGGTCAGTGCCCAAATGAGCGGAAATATGGAGGATGTTGCAGGTGTCACGCAGTTAATGCGCGAAATGCTGCAATTAATAAAATTTCAGTTCAGCCTTAATTACCAGGAAGAAAGCTTGAGTTATCAGCGACTGGTTACACATCTGAAGTTTTTATCCTGGCGTATTCTTGAACATGCTTCAATTAACGATAGTGATGAATCATTACAACAAGCAGTAAAACAAAATTACCCGCAAGCATGGCAATGTGCGGAACGGATCGCCATTTTTATTGGTTTGCAGTATCAACGTAAAATTTCACCCGCAGAGATTATGTTTTTAGCCATAAATATAGAGCGCGTGCGCAAAGAACACTGA", + "dna_sequence_length": 837, + "functions": [ + "transcriptional antiterminator of the bgl operon" + ], + "id": "CDS_3672", + "location": [ + [ + "NC_000913", + 3906567, + "-", + 837 + ] + ], + "md5": "82ad703b98ef9da706a8ba16eb8cc472", + "parent_gene": "", + "protein_md5": "9cdb972cee1fdf6252a87c2d7e7c3719", + "protein_translation": "MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012177" + ], + [ + "gene_synonym", + "ECK3717" + ], + [ + "gene_synonym", + "EcoGene:EG10735" + ], + [ + "gene_synonym", + "GI:16131592" + ], + [ + "gene_synonym", + "GeneID:948233" + ], + [ + "gene_synonym", + "JW3702" + ], + [ + "gene_synonym", + "NP_418180.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K7" + ], + [ + "gene_synonym", + "b3724" + ], + [ + "gene_synonym", + "phoT" + ], + [ + "gene_synonym", + "phoU" + ] + ], + "dna_sequence": "ATGGACAGTCTCAATCTTAATAAACATATTTCCGGCCAGTTCAACGCCGAACTGGAAAGTATCCGCACGCAGGTGATGACCATGGGCGGCATGGTGGAGCAGCAGCTTTCTGATGCAATCACCGCGATGCATAACCAGGACAGCGATCTGGCGAAGCGCGTCATCGAAGGCGACAAGAACGTCAACATGATGGAAGTGGCGATCGATGAAGCCTGCGTGCGCATTATCGCCAAACGTCAGCCGACGGCGAGCGACCTGCGACTGGTTATGGTGATCAGTAAAACCATTGCCGAGCTGGAGCGTATTGGCGACGTGGCGGACAAAATCTGCCGTACTGCGCTGGAGAAATTCTCCCAGCAGCATCAGCCGTTGCTGGTAAGTCTGGAGTCGCTGGGCCGTCATACCATCCAGATGCTGCACGACGTGCTGGACGCGTTCGCGCGGATGGACATTGACGAAGCGGTACGTATTTATCGTGAAGATAAAAAAGTCGATCAGGAATACGAAGGTATTGTTCGTCAACTGATGACCTACATGATGGAAGATTCGCGTACCATTCCGAGCGTACTTACTGCGCTGTTCTGCGCGCGTTCTATCGAACGTATTGGCGACCGCTGCCAGAATATTTGTGAGTTTATCTTCTACTACGTGAAGGGGCAGGATTTCCGTCACGTCGGTGGCGATGAGCTGGATAAACTGCTGGCGGGGAAAGATAGCGACAAATAA", + "dna_sequence_length": 726, + "functions": [ + "negative regulator of PhoR/PhoB two-component regulator" + ], + "id": "CDS_3673", + "location": [ + [ + "NC_000913", + 3907578, + "-", + 726 + ] + ], + "md5": "ac529d2827835829e87a91009ffee3d6", + "parent_gene": "", + "protein_md5": "c985a3c3e3ec4449c6414e751233c51d", + "protein_translation": "MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERIGDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYREDKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVKGQDFRHVGGDELDKLLAGKDSDK", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012179" + ], + [ + "gene_synonym", + "ECK3718" + ], + [ + "gene_synonym", + "EcoGene:EG10783" + ], + [ + "gene_synonym", + "GI:16131593" + ], + [ + "gene_synonym", + "GeneID:948240" + ], + [ + "gene_synonym", + "JW3703" + ], + [ + "gene_synonym", + "NP_418181.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAH0" + ], + [ + "gene_synonym", + "b3725" + ], + [ + "gene_synonym", + "phoT" + ], + [ + "gene_synonym", + "pstB" + ] + ], + "dna_sequence": "ATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCAGGTAACGGCGTTTATCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGCGTGCGAAAGTGGGCATGGTGTTCCAGAAACCGACGCCGTTTCCGATGTCCATCTACGACAACATCGCTTTTGGCGTTCGTCTGTTTGAGAAGCTCTCCCGTGCCGACATGGACGAGCGCGTGCAGTGGGCATTGACCAAAGCCGCATTGTGGAACGAAACCAAAGATAAATTGCACCAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGCGAATTGATTGAGTTCAGCAACACGGACGATCTGTTCACCAAGCCAGCGAAGAAACAAACAGAAGACTACATCACCGGTCGTTACGGTTGA", + "dna_sequence_length": 774, + "functions": [ + "phosphate ABC transporter ATPase" + ], + "id": "CDS_3674", + "location": [ + [ + "NC_000913", + 3908366, + "-", + 774 + ] + ], + "md5": "ca5d49c6a80d6b8e21eb47f0c733f13e", + "parent_gene": "", + "protein_md5": "89f4e395d961f21495741ae5f17800b1", + "protein_translation": "MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012184" + ], + [ + "gene_synonym", + "ECK3719" + ], + [ + "gene_synonym", + "EcoGene:EG10782" + ], + [ + "gene_synonym", + "GI:16131594" + ], + [ + "gene_synonym", + "GeneID:948239" + ], + [ + "gene_synonym", + "JW3704" + ], + [ + "gene_synonym", + "NP_418182.1" + ], + [ + "gene_synonym", + "R2pho" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07654" + ], + [ + "gene_synonym", + "b3726" + ], + [ + "gene_synonym", + "phoR2b" + ], + [ + "gene_synonym", + "phoT" + ], + [ + "gene_synonym", + "pstA" + ] + ], + "dna_sequence": "ATGGCTATGGTTGAAATGCAAACCACTGCGGCGCTGGCTGAATCTCGCCGCAAAATGCAGGCGCGTCGCCGCCTCAAAAACCGTATTGCGCTGACGCTCTCGATGGCGACGATGGCCTTCGGCCTGTTCTGGCTGATCTGGATTTTAATGTCCACCATCACTCGCGGTATCGACGGTATGTCGCTGGCGCTGTTCACTGAAATGACGCCGCCGCCCAATACGGAAGGTGGTGGTCTGGCGAACGCTCTGGCGGGTAGCGGGCTGTTAATTTTGTGGGCCACGGTATTCGGTACGCCGCTGGGCATTATGGCGGGGATTTATCTGGCGGAATATGGTCGTAAATCCTGGCTGGCAGAAGTGATTCGCTTCATTAACGACATTCTGCTCTCTGCGCCGTCGATTGTGGTTGGTCTGTTTGTTTACACCATTGTGGTGGCGCAGATGGAGCACTTCTCCGGCTGGGCGGGCGTGATTGCCCTGGCGTTGTTGCAGGTGCCGATTGTTATCCGCACCACCGAGAACATGCTGAAACTGGTGCCGTACAGCCTGCGTGAAGCGGCTTATGCGCTGGGTACACCGAAGTGGAAGATGATCTCTGCGATTACGCTGAAAGCGTCGGTGTCCGGGATTATGACCGGTATCCTGCTGGCGATTGCCCGTATTGCTGGTGAAACCGCGCCGCTGCTGTTTACCGCGCTCTCCAACCAGTTCTGGAGCACGGACATGATGCAGCCGATCGCCAACCTGCCGGTGACGATCTTTAAGTTTGCGATGAGCCCGTTTGCGGAATGGCAGCAATTGGCCTGGGCCGGGGTATTGATCATTACCCTGTGCGTACTGCTGCTGAACATTCTGGCGCGCGTTGTTTTTGCGAAGAATAAACACGGTTGA", + "dna_sequence_length": 891, + "functions": [ + "phosphate ABC transporter permease" + ], + "id": "CDS_3675", + "location": [ + [ + "NC_000913", + 3909439, + "-", + 891 + ] + ], + "md5": "c215d0a8002359370cda0c07278a3f1c", + "parent_gene": "", + "protein_md5": "c7c808e23ee95b56cd60bc41c96f9abb", + "protein_translation": "MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVPYSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVVFAKNKHG", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012186" + ], + [ + "gene_synonym", + "ECK3720" + ], + [ + "gene_synonym", + "EcoGene:EG10784" + ], + [ + "gene_synonym", + "GI:16131595" + ], + [ + "gene_synonym", + "GeneID:948238" + ], + [ + "gene_synonym", + "JW3705" + ], + [ + "gene_synonym", + "NP_418183.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGH8" + ], + [ + "gene_synonym", + "b3727" + ], + [ + "gene_synonym", + "phoW" + ], + [ + "gene_synonym", + "pstC" + ] + ], + "dna_sequence": "ATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGGGCGACATAATTTTCAGCGTGCTGGTAAAACTGGCGGCGCTGATTGTGCTATTGATGTTGGGTGGCATTATTGTCTCTCTGATCATCTCCTCCTGGCCGAGCATTCAGAAATTTGGTCTGGCTTTCCTATGGACCAAAGAGTGGGATGCACCGAACGATATCTACGGGGCGCTGGTGCCGATCTACGGTACGTTGGTGACTTCGTTTATCGCGCTGCTGATCGCCGTCCCGGTGAGTTTCGGTATCGCCCTGTTCCTGACTGAGCTTGCGCCTGGCTGGCTGAAACGCCCGCTGGGTATCGCCATTGAGCTGCTGGCAGCCATTCCAAGTATCGTTTACGGCATGTGGGGCCTGTTTATCTTTGCGCCGCTGTTCGCCGTTTACTTTCAGGAGCCGGTCGGCAATATCATGTCGAATATCCCGATTGTTGGCGCGCTGTTCTCTGGCCCCGCATTTGGTATCGGTATCCTCGCGGCAGGCGTGATCCTCGCCATCATGATTATTCCGTACATTGCGGCGGTAATGCGTGATGTGTTCGAACAAACCCCGGTGATGATGAAAGAGTCGGCCTACGGTATTGGCTGCACCACCTGGGAAGTTATCTGGCGTATCGTTCTTCCGTTCACCAAAAATGGTGTTATCGGCGGCATCATGCTGGGGCTGGGCCGCGCGCTCGGTGAAACCATGGCGGTGACCTTTATCATCGGTAACACCTACCAGCTCGACAGCGCCTCGCTGTATATGCCGGGCAACAGTATCACCTCTGCGCTGGCGAACGAATTTGCGGAAGCGGAATCCGGTCTGCACGTTGCCGCACTGATGGAACTGGGCCTGATCCTGTTTGTGATTACCTTCATCGTCCTCGCCGCATCGAAGTTTATGATTATGCGCCTGGCTAAGAATGAGGGGGCACGCTAA", + "dna_sequence_length": 960, + "functions": [ + "phosphate ABC transporter permease" + ], + "id": "CDS_3676", + "location": [ + [ + "NC_000913", + 3910398, + "-", + 960 + ] + ], + "md5": "d8f74dd1256066f64460eef249c48337", + "parent_gene": "", + "protein_md5": "35bab65849b37f27d224829abaa874fa", + "protein_translation": "MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012190" + ], + [ + "gene_synonym", + "ECK3721" + ], + [ + "gene_synonym", + "EcoGene:EG10734" + ], + [ + "gene_synonym", + "GI:16131596" + ], + [ + "gene_synonym", + "GeneID:948237" + ], + [ + "gene_synonym", + "JW3706" + ], + [ + "gene_synonym", + "NP_418184.1" + ], + [ + "gene_synonym", + "R2pho" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG82" + ], + [ + "gene_synonym", + "b3728" + ], + [ + "gene_synonym", + "nmpA" + ], + [ + "gene_synonym", + "phoR2a" + ], + [ + "gene_synonym", + "phoS" + ], + [ + "gene_synonym", + "pstS" + ] + ], + "dna_sequence": "ATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGCAGGTGCAACCTTCCCTGCGCCGGTGTATGCCAAATGGGCTGACACTTACCAGAAAGAAACCGGTAATAAAGTTAACTACCAGGGTATCGGTTCTTCCGGTGGCGTAAAACAGATTATCGCTAATACCGTTGATTTTGGTGCCTCTGACGCGCCGCTGTCTGACGAAAAACTGGCTCAGGAAGGTCTGTTCCAGTTCCCGACCGTGATTGGCGGCGTGGTGCTGGCGGTTAACATTCCAGGGCTGAAGTCTGGCGAACTGGTGCTGGATGGTAAAACCCTCGGCGACATCTACCTGGGCAAAATCAAGAAGTGGGATGATGAAGCCATCGCCAAACTGAATCCGGGTCTGAAACTGCCTTCACAAAACATTGCTGTAGTACGCCGCGCAGATGGCTCCGGGACTTCCTTCGTCTTCACCAGCTACCTGGCGAAAGTGAACGAAGAGTGGAAAAACAACGTTGGTACTGGCTCTACCGTAAAATGGCCGATCGGTCTGGGCGGTAAAGGTAACGACGGTATCGCCGCGTTCGTTCAGCGTCTGCCGGGTGCAATTGGTTATGTTGAATATGCTTACGCGAAGCAGAACAACCTGGCGTACACCAAACTGATCTCCGCTGATGGTAAACCGGTTAGTCCGACCGAAGAAAACTTCGCTAATGCAGCAAAAGGTGCAGACTGGAGCAAAACCTTCGCTCAGGATCTGACCAACCAGAAAGGCGAAGATGCATGGCCTATTACCTCTACCACGTTCATTCTGATCCACAAAGATCAGAAGAAACCAGAACAAGGCACAGAAGTGCTGAAATTCTTCGACTGGGCGTACAAAACCGGGGCTAAACAGGCGAACGACCTGGATTACGCCAGCCTGCCGGATAGTGTAGTTGAACAGGTTCGCGCTGCGTGGAAGACCAATATTAAAGACAGTAGCGGTAAGCCGCTGTACTAA", + "dna_sequence_length": 1041, + "functions": [ + "phosphate ABC transporter periplasmic binding protein" + ], + "id": "CDS_3677", + "location": [ + [ + "NC_000913", + 3911525, + "-", + 1041 + ] + ], + "md5": "edd7605432964603254f5d5481d7973b", + "parent_gene": "", + "protein_md5": "3fb2549c0452e2100be49f3a0d2cffea", + "protein_translation": "MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKWADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWKTNIKDSSGKPLY", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012198" + ], + [ + "gene_synonym", + "ECK3722" + ], + [ + "gene_synonym", + "EcoGene:EG10382" + ], + [ + "gene_synonym", + "GI:16131597" + ], + [ + "gene_synonym", + "GeneID:948241" + ], + [ + "gene_synonym", + "JW3707" + ], + [ + "gene_synonym", + "NP_418185.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17169" + ], + [ + "gene_synonym", + "b3729" + ], + [ + "gene_synonym", + "glmS" + ] + ], + "dna_sequence": "ATGTGTGGAATTGTTGGCGCGATCGCGCAACGTGATGTAGCAGAAATCCTTCTTGAAGGTTTACGTCGTCTGGAATACCGCGGATATGACTCTGCCGGTCTGGCCGTTGTTGATGCAGAAGGTCATATGACCCGCCTGCGTCGCCTCGGTAAAGTCCAGATGCTGGCACAGGCAGCGGAAGAACATCCTCTGCATGGCGGCACTGGTATTGCTCACACTCGCTGGGCGACCCACGGTGAACCTTCAGAAGTGAATGCGCATCCGCATGTTTCTGAACACATTGTGGTGGTGCATAACGGCATCATCGAAAACCATGAACCGCTGCGTGAAGAGCTAAAAGCGCGTGGCTATACCTTCGTTTCTGAAACCGACACCGAAGTGATTGCCCATCTGGTGAACTGGGAGCTGAAACAAGGCGGGACTCTGCGTGAGGCCGTTCTGCGTGCTATCCCGCAGCTGCGTGGTGCGTACGGTACAGTGATCATGGACTCCCGTCACCCGGATACCCTGCTGGCGGCACGTTCTGGTAGTCCGCTGGTGATTGGCCTGGGGATGGGCGAAAACTTTATCGCTTCTGACCAGCTGGCGCTGTTGCCGGTGACCCGTCGCTTTATCTTCCTTGAAGAGGGCGATATTGCGGAAATCACTCGCCGTTCGGTAAACATCTTCGATAAAACTGGCGCGGAAGTAAAACGTCAGGATATCGAATCCAATCTGCAATATGACGCGGGCGATAAAGGCATTTACCGTCACTACATGCAGAAAGAGATCTACGAACAGCCGAACGCGATCAAAAACACCCTTACCGGACGCATCAGCCACGGTCAGGTTGATTTAAGCGAGCTGGGACCGAACGCCGACGAACTGCTGTCGAAGGTTGAGCATATTCAGATCCTCGCCTGTGGTACTTCTTATAACTCCGGTATGGTTTCCCGCTACTGGTTTGAATCGCTAGCAGGTATTCCGTGCGACGTCGAAATCGCCTCTGAATTCCGCTATCGCAAATCTGCCGTGCGTCGTAACAGCCTGATGATCACCTTGTCACAGTCTGGCGAAACCGCGGATACCCTGGCTGGCCTGCGTCTGTCGAAAGAGCTGGGTTACCTTGGTTCACTGGCAATCTGTAACGTTCCGGGTTCTTCTCTGGTGCGCGAATCCGATCTGGCGCTAATGACCAACGCGGGTACAGAAATCGGCGTGGCATCCACTAAAGCATTCACCACTCAGTTAACTGTGCTGTTGATGCTGGTGGCGAAGCTGTCTCGCCTGAAAGGTCTGGATGCCTCCATTGAACATGACATCGTGCATGGTCTGCAGGCGCTGCCGAGCCGTATTGAGCAGATGCTGTCTCAGGACAAACGCATTGAAGCGCTGGCAGAAGATTTCTCTGACAAACATCACGCGCTGTTCCTGGGCCGTGGCGATCAGTACCCAATCGCGCTGGAAGGCGCATTGAAGTTGAAAGAGATCTCTTACATTCACGCTGAAGCCTACGCTGCTGGCGAACTGAAACACGGTCCGCTGGCGCTAATTGATGCCGATATGCCGGTTATTGTTGTTGCACCGAACAACGAATTGCTGGAAAAACTGAAATCCAACATTGAAGAAGTTCGCGCGCGTGGCGGTCAGTTGTATGTCTTCGCCGATCAGGATGCGGGTTTTGTAAGTAGCGATAACATGCACATCATCGAGATGCCGCATGTGGAAGAGGTGATTGCACCGATCTTCTACACCGTTCCGCTGCAGCTGCTGGCTTACCATGTCGCGCTGATCAAAGGCACCGACGTTGACCAGCCGCGTAACCTGGCAAAATCGGTTACGGTTGAGTAA", + "dna_sequence_length": 1830, + "functions": [ + "L-glutamine:D-fructose-6-phosphate aminotransferase" + ], + "id": "CDS_3678", + "location": [ + [ + "NC_000913", + 3913668, + "-", + 1830 + ] + ], + "md5": "462f70bd6f5109dd3152a05c4eab01ea", + "parent_gene": "", + "protein_md5": "3d0070cce1db51f60f49580883bc373d", + "protein_translation": "MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE", + "protein_translation_length": 609, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012201" + ], + [ + "gene_synonym", + "ECK3723" + ], + [ + "gene_synonym", + "EcoGene:EG11198" + ], + [ + "gene_synonym", + "GI:16131598" + ], + [ + "gene_synonym", + "GeneID:948246" + ], + [ + "gene_synonym", + "JW3708" + ], + [ + "gene_synonym", + "NP_418186.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACC7" + ], + [ + "gene_synonym", + "b3730" + ], + [ + "gene_synonym", + "glmU" + ], + [ + "gene_synonym", + "tms" + ], + [ + "gene_synonym", + "yieA" + ] + ], + "dna_sequence": "ATGTTGAATAATGCTATGAGCGTAGTGATCCTTGCCGCAGGCAAAGGCACGCGCATGTATTCCGATCTTCCGAAAGTGCTGCATACCCTTGCCGGGAAAGCGATGGTTCAGCATGTCATTGATGCTGCGAATGAATTAGGCGCAGCGCACGTTCACCTGGTGTACGGTCACGGCGGCGATCTGCTAAAACAGGCGCTGAAAGACGACAACCTTAACTGGGTGCTTCAGGCAGAGCAGCTGGGTACGGGTCATGCAATGCAGCAGGCCGCACCTTTCTTTGCCGATGATGAAGACATTTTAATGCTCTACGGCGACGTGCCGCTGATCTCTGTCGAAACACTCCAGCGTCTGCGTGATGCTAAACCGCAGGGTGGCATTGGTCTGCTGACGGTGAAACTGGATGATCCGACCGGTTATGGACGTATCACCCGTGAAAACGGCAAAGTTACCGGCATTGTTGAGCACAAAGATGCCACCGACGAGCAGCGTCAGATTCAGGAGATCAACACCGGCATTCTGATTGCCAACGGCGCAGATATGAAACGCTGGCTGGCGAAGCTGACCAACAATAATGCTCAGGGCGAATACTACATCACCGACATTATTGCGCTGGCGTATCAGGAAGGGCGTGAAATCGTCGCCGTTCATCCGCAACGTTTAAGCGAAGTAGAAGGCGTGAATAACCGCCTGCAACTCTCCCGTCTGGAGCGTGTTTATCAGTCCGAACAGGCTGAAAAACTGCTGTTAGCAGGCGTTATGCTGCGCGATCCAGCGCGTTTTGATCTGCGTGGTACGCTAACTCACGGGCGCGATGTTGAAATTGATACTAACGTTATCATCGAGGGCAACGTGACTCTCGGTCATCGCGTGAAAATTGGCACCGGTTGCGTGATTAAAAACAGCGTGATTGGCGATGATTGCGAAATCAGTCCGTATACCGTTGTGGAAGATGCGAATCTGGCAGCGGCCTGTACCATTGGCCCGTTTGCCCGTTTGCGTCCTGGTGCTGAGTTGCTGGAAGGTGCTCACGTCGGTAACTTCGTTGAGATGAAAAAAGCGCGTCTGGGTAAAGGCTCGAAAGCTGGTCATCTGACTTACCTGGGCGATGCGGAAATTGGCGATAACGTTAACATCGGCGCGGGAACCATTACCTGCAACTACGATGGTGCGAATAAATTTAAGACCATTATCGGCGACGATGTGTTTGTTGGTTCCGACACTCAGCTGGTGGCCCCGGTAACAGTAGGCAAAGGCGCGACCATTGCTGCGGGTACAACTGTGACGCGTAATGTCGGCGAAAATGCATTAGCTATCAGCCGTGTGCCGCAGACTCAGAAAGAAGGCTGGCGTCGTCCGGTAAAGAAAAAGTGA", + "dna_sequence_length": 1371, + "functions": [ + "fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase" + ], + "id": "CDS_3679", + "location": [ + [ + "NC_000913", + 3915200, + "-", + 1371 + ] + ], + "md5": "7de2b91c0dd30cfb5ca6d07d498ccf6c", + "parent_gene": "", + "protein_md5": "17be33986353f1d5490ae097345f8a99", + "protein_translation": "MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK", + "protein_translation_length": 456, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012206" + ], + [ + "gene_synonym", + "ECK3724" + ], + [ + "gene_synonym", + "EcoGene:EG10100" + ], + [ + "gene_synonym", + "GI:16131599" + ], + [ + "gene_synonym", + "GeneID:948245" + ], + [ + "gene_synonym", + "JW3709" + ], + [ + "gene_synonym", + "NP_418187.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6E6" + ], + [ + "gene_synonym", + "atpC" + ], + [ + "gene_synonym", + "b3731" + ], + [ + "gene_synonym", + "papG" + ], + [ + "gene_synonym", + "uncC" + ] + ], + "dna_sequence": "ATGGCAATGACTTACCACCTGGACGTCGTCAGCGCAGAGCAACAAATGTTCTCTGGTCTGGTCGAGAAAATCCAGGTAACGGGTAGCGAAGGTGAACTGGGGATCTACCCTGGCCACGCACCGCTGCTCACCGCCATTAAGCCTGGTATGATTCGCATCGTGAAACAGCACGGTCACGAAGAGTTTATCTATCTGTCTGGCGGCATTCTTGAAGTGCAGCCTGGCAACGTGACCGTTCTGGCCGACACCGCAATTCGCGGCCAGGATCTCGACGAAGCGCGAGCCATGGAAGCGAAACGTAAGGCTGAAGAGCACATTAGCAGCTCTCACGGCGACGTAGATTACGCTCAGGCGTCTGCGGAACTGGCCAAAGCGATCGCGCAGCTGCGCGTTATCGAGTTGACCAAAAAAGCGATGTAA", + "dna_sequence_length": 420, + "functions": [ + "F1 sector of membrane-bound ATP synthase, epsilon subunit" + ], + "id": "CDS_3680", + "location": [ + [ + "NC_000913", + 3915972, + "-", + 420 + ] + ], + "md5": "37b35cb47f95439f3b84be4f2349dd81", + "parent_gene": "", + "protein_md5": "9697dece7ffc23f6ca461bc452f22532", + "protein_translation": "MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012208" + ], + [ + "gene_synonym", + "ECK3725" + ], + [ + "gene_synonym", + "EcoGene:EG10101" + ], + [ + "gene_synonym", + "GI:16131600" + ], + [ + "gene_synonym", + "GeneID:948244" + ], + [ + "gene_synonym", + "JW3710" + ], + [ + "gene_synonym", + "NP_418188.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABB4" + ], + [ + "gene_synonym", + "atpD" + ], + [ + "gene_synonym", + "b3732" + ], + [ + "gene_synonym", + "papB" + ], + [ + "gene_synonym", + "uncD" + ] + ], + "dna_sequence": "ATGGCTACTGGAAAGATTGTCCAGGTAATCGGCGCCGTAGTTGACGTCGAATTCCCTCAGGATGCCGTACCGCGCGTGTACGATGCTCTTGAGGTGCAAAATGGTAATGAGCGTCTGGTGCTGGAAGTTCAGCAGCAGCTCGGCGGCGGTATCGTACGTACCATCGCAATGGGTTCCTCCGACGGTCTGCGTCGCGGTCTGGATGTAAAAGACCTCGAACACCCGATTGAAGTCCCGGTAGGTAAAGCGACTCTGGGCCGTATCATGAACGTACTGGGTGAACCGGTCGACATGAAAGGCGAGATCGGTGAAGAAGAGCGTTGGGCGATTCACCGCGCAGCACCTTCCTACGAAGAGCTGTCAAACTCTCAGGAACTGCTGGAAACCGGTATCAAAGTTATCGACCTGATGTGTCCGTTCGCTAAGGGCGGTAAAGTTGGTCTGTTCGGTGGTGCGGGTGTAGGTAAAACCGTAAACATGATGGAGCTCATTCGTAACATCGCGATCGAGCACTCCGGTTACTCTGTGTTTGCGGGCGTAGGTGAACGTACTCGTGAGGGTAACGACTTCTACCACGAAATGACCGACTCCAACGTTATCGACAAAGTATCCCTGGTGTATGGCCAGATGAACGAGCCGCCGGGAAACCGTCTGCGCGTTGCTCTGACCGGTCTGACCATGGCTGAGAAATTCCGTGACGAAGGTCGTGACGTTCTGCTGTTCGTTGACAACATCTATCGTTACACCCTGGCCGGTACGGAAGTATCCGCACTGCTGGGCCGTATGCCTTCAGCGGTAGGTTATCAGCCGACCCTGGCGGAAGAGATGGGCGTTCTGCAGGAACGTATCACCTCCACCAAAACTGGTTCTATCACCTCCGTACAGGCAGTATACGTACCTGCGGATGACTTGACTGACCCGTCTCCGGCAACCACCTTTGCGCACCTTGACGCAACCGTGGTACTGAGCCGTCAGATCGCGTCTCTGGGTATCTACCCGGCCGTTGACCCGCTGGACTCCACCAGCCGTCAGCTGGACCCGCTGGTGGTTGGTCAGGAACACTACGACACCGCGCGTGGCGTTCAGTCCATCCTGCAACGTTATCAGGAACTGAAAGACATCATCGCCATCCTGGGTATGGATGAACTGTCTGAAGAAGACAAACTGGTGGTAGCGCGTGCTCGTAAGATCCAGCGCTTCCTGTCCCAGCCGTTCTTCGTGGCAGAAGTATTCACCGGTTCTCCGGGTAAATACGTCTCCCTGAAAGACACCATCCGTGGCTTTAAAGGCATCATGGAAGGCGAATACGATCACCTGCCGGAGCAGGCGTTCTACATGGTCGGTTCCATCGAAGAAGCTGTGGAAAAAGCCAAAAAACTTTAA", + "dna_sequence_length": 1383, + "functions": [ + "F1 sector of membrane-bound ATP synthase, beta subunit" + ], + "id": "CDS_3681", + "location": [ + [ + "NC_000913", + 3917375, + "-", + 1383 + ] + ], + "md5": "b0bc0597988acde73cabbddde1d928d6", + "parent_gene": "", + "protein_md5": "87a0407f808f3b21b2ac263219666221", + "protein_translation": "MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012211" + ], + [ + "gene_synonym", + "ECK3726" + ], + [ + "gene_synonym", + "EcoGene:EG10104" + ], + [ + "gene_synonym", + "GI:16131601" + ], + [ + "gene_synonym", + "GeneID:948243" + ], + [ + "gene_synonym", + "JW3711" + ], + [ + "gene_synonym", + "NP_418189.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABA6" + ], + [ + "gene_synonym", + "atpG" + ], + [ + "gene_synonym", + "b3733" + ], + [ + "gene_synonym", + "papC" + ], + [ + "gene_synonym", + "uncG" + ] + ], + "dna_sequence": "ATGGCCGGCGCAAAAGAGATACGTAGTAAGATCGCAAGCGTCCAGAACACGCAAAAGATCACTAAAGCGATGGAGATGGTCGCCGCTTCCAAAATGCGTAAATCGCAGGATCGCATGGCGGCCAGCCGTCCTTATGCAGAAACCATGCGCAAAGTGATTGGTCACCTTGCACACGGTAATCTGGAATATAAGCACCCTTACCTGGAAGACCGCGACGTTAAACGCGTGGGCTACCTGGTGGTGTCGACCGACCGTGGTTTGTGCGGTGGTTTGAACATTAACCTGTTCAAAAAACTGCTGGCGGAAATGAAGACCTGGACCGACAAAGGCGTTCAATGCGACCTCGCAATGATCGGCTCGAAAGGCGTGTCGTTCTTCAACTCCGTGGGCGGCAATGTTGTTGCCCAGGTCACCGGCATGGGGGATAACCCTTCCCTGTCCGAACTGATCGGTCCGGTAAAAGTGATGTTGCAGGCCTACGACGAAGGCCGTCTGGACAAGCTTTACATTGTCAGCAACAAATTTATTAACACCATGTCTCAGGTTCCGACCATCAGCCAGCTGCTGCCGTTACCGGCATCAGATGATGATGATCTGAAACATAAATCCTGGGATTACCTGTACGAACCCGATCCGAAGGCGTTGCTGGATACCCTGCTGCGTCGTTATGTCGAATCTCAGGTTTATCAGGGCGTGGTTGAAAACCTGGCCAGCGAGCAGGCCGCCCGTATGGTGGCGATGAAAGCCGCGACCGACAATGGCGGCAGCCTGATTAAAGAGCTGCAGTTGGTATACAACAAAGCTCGTCAGGCCAGCATTACTCAGGAACTCACCGAGATCGTCTCGGGGGCCGCCGCGGTTTAA", + "dna_sequence_length": 864, + "functions": [ + "F1 sector of membrane-bound ATP synthase, gamma subunit" + ], + "id": "CDS_3682", + "location": [ + [ + "NC_000913", + 3918265, + "-", + 864 + ] + ], + "md5": "58fb640a39bfaa6a88ba5ec470af7399", + "parent_gene": "", + "protein_md5": "d21bdcc2f9fc8b3e07ce5eaed473d7bb", + "protein_translation": "MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012213" + ], + [ + "gene_synonym", + "ECK3727" + ], + [ + "gene_synonym", + "EcoGene:EG10098" + ], + [ + "gene_synonym", + "GI:16131602" + ], + [ + "gene_synonym", + "GeneID:948242" + ], + [ + "gene_synonym", + "JW3712" + ], + [ + "gene_synonym", + "NP_418190.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABB0" + ], + [ + "gene_synonym", + "atpA" + ], + [ + "gene_synonym", + "b3734" + ], + [ + "gene_synonym", + "papA" + ], + [ + "gene_synonym", + "uncA" + ] + ], + "dna_sequence": "ATGCAACTGAATTCCACCGAAATCAGCGAACTGATCAAGCAGCGCATTGCTCAGTTCAATGTTGTGAGTGAAGCTCACAACGAAGGTACTATTGTTTCTGTAAGTGACGGTGTTATCCGCATTCACGGCCTGGCCGATTGTATGCAGGGTGAAATGATCTCCCTGCCGGGTAACCGTTACGCTATCGCACTGAACCTCGAGCGCGACTCTGTAGGTGCGGTTGTTATGGGTCCGTACGCTGACCTTGCCGAAGGCATGAAAGTTAAGTGTACTGGCCGTATCCTGGAAGTTCCGGTTGGCCGTGGCCTGCTGGGCCGTGTGGTTAACACTCTGGGTGCACCAATCGACGGTAAAGGTCCGCTGGATCACGACGGCTTCTCTGCTGTAGAAGCAATCGCTCCGGGCGTTATCGAACGTCAGTCCGTAGATCAGCCGGTACAGACCGGTTATAAAGCCGTTGACTCCATGATCCCAATCGGTCGTGGTCAGCGTGAATTGATCATCGGTGACCGTCAGACAGGTAAAACCGCACTGGCTATCGATGCCATCATCAACCAGCGCGATTCCGGTATCAAATGTATCTATGTCGCTATCGGCCAGAAAGCGTCCACCATTTCTAACGTGGTACGTAAACTGGAAGAGCACGGCGCACTGGCTAACACCATCGTTGTGGTAGCAACCGCGTCTGAATCCGCTGCACTGCAATACCTGGCACCGTATGCCGGTTGCGCAATGGGCGAATACTTCCGTGACCGCGGTGAAGATGCGCTGATCATTTACGATGACCTGTCTAAACAGGCTGTTGCTTACCGTCAGATCTCCCTGCTGCTCCGTCGTCCGCCAGGACGTGAAGCATTCCCGGGCGACGTTTTCTACCTCCACTCTCGTCTGCTGGAGCGTGCTGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCGGGTATTTCCGTATCCCGTGTTGGTGGTGCAGCACAGACCAAGATCATGAAAAAACTGTCCGGTGGTATCCGTACCGCTCTGGCACAGTATCGTGAACTGGCAGCGTTCTCTCAGTTTGCATCCGACCTTGACGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCCGATGTCCGTTGCGCAGCAGTCTCTGGTTCTGTTCGCAGCAGAACGTGGTTACCTGGCGGATGTTGAACTGTCGAAAATTGGCAGCTTCGAAGCCGCTCTGCTGGCTTACGTCGACCGTGATCACGCTCCGTTGATGCAAGAGATCAACCAGACCGGTGGCTACAACGACGAAATCGAAGGCAAGCTGAAAGGCATCCTCGATTCCTTCAAAGCAACCCAATCCTGGTAA", + "dna_sequence_length": 1542, + "functions": [ + "F1 sector of membrane-bound ATP synthase, alpha subunit" + ], + "id": "CDS_3683", + "location": [ + [ + "NC_000913", + 3919857, + "-", + 1542 + ] + ], + "md5": "ebd5678f767eb70557de3bc830e40334", + "parent_gene": "", + "protein_md5": "5eedc69dcc8a494aac3431061697c90c", + "protein_translation": "MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFKATQSW", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012215" + ], + [ + "gene_synonym", + "ECK3728" + ], + [ + "gene_synonym", + "EcoGene:EG10105" + ], + [ + "gene_synonym", + "GI:16131603" + ], + [ + "gene_synonym", + "GeneID:948254" + ], + [ + "gene_synonym", + "JW3713" + ], + [ + "gene_synonym", + "NP_418191.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABA4" + ], + [ + "gene_synonym", + "atpH" + ], + [ + "gene_synonym", + "b3735" + ], + [ + "gene_synonym", + "papE" + ], + [ + "gene_synonym", + "uncH" + ] + ], + "dna_sequence": "ATGTCTGAATTTATTACGGTAGCTCGCCCCTACGCCAAAGCAGCTTTTGACTTTGCCGTCGAACACCAAAGTGTAGAACGCTGGCAGGACATGCTGGCGTTTGCCGCCGAGGTAACCAAAAACGAACAAATGGCAGAGCTTCTCTCTGGCGCGCTTGCGCCAGAAACGCTCGCCGAGTCGTTTATCGCAGTTTGTGGTGAGCAACTGGACGAAAACGGTCAGAACCTGATTCGGGTTATGGCTGAAAATGGTCGTCTTAACGCGCTCCCGGATGTTCTGGAGCAGTTTATTCACCTGCGTGCCGTGAGTGAGGCTACCGCTGAGGTAGACGTCATTTCCGCTGCCGCACTGAGTGAACAACAGCTCGCGAAAATTTCTGCTGCGATGGAAAAACGTCTGTCACGCAAAGTTAAGCTGAATTGCAAAATCGATAAGTCTGTAATGGCAGGCGTTATCATCCGAGCGGGTGATATGGTCATTGATGGCAGCGTACGCGGTCGTCTTGAGCGCCTTGCAGACGTCTTGCAGTCTTAA", + "dna_sequence_length": 534, + "functions": [ + "F1 sector of membrane-bound ATP synthase, delta subunit" + ], + "id": "CDS_3684", + "location": [ + [ + "NC_000913", + 3920403, + "-", + 534 + ] + ], + "md5": "ed057073143da5515dfc3dc57eb3556d", + "parent_gene": "", + "protein_md5": "9493d28b2334a35fbf3a5971f94c0d6b", + "protein_translation": "MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS", + "protein_translation_length": 177, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012217" + ], + [ + "gene_synonym", + "ECK3729" + ], + [ + "gene_synonym", + "EcoGene:EG10103" + ], + [ + "gene_synonym", + "GI:16131604" + ], + [ + "gene_synonym", + "GeneID:948247" + ], + [ + "gene_synonym", + "JW3714" + ], + [ + "gene_synonym", + "NP_418192.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABA0" + ], + [ + "gene_synonym", + "atpF" + ], + [ + "gene_synonym", + "b3736" + ], + [ + "gene_synonym", + "papF" + ], + [ + "gene_synonym", + "uncF" + ] + ], + "dna_sequence": "GTGAATCTTAACGCAACAATCCTCGGCCAGGCCATCGCGTTTGTCCTGTTCGTTCTGTTCTGCATGAAGTACGTATGGCCGCCATTAATGGCAGCCATCGAAAAACGTCAAAAAGAAATTGCTGACGGCCTTGCTTCCGCAGAACGAGCACATAAGGACCTTGACCTTGCAAAGGCCAGCGCGACCGACCAGCTGAAAAAAGCGAAAGCGGAAGCCCAGGTAATCATCGAGCAGGCGAACAAACGCCGCTCGCAGATTCTGGACGAAGCGAAAGCTGAGGCAGAACAGGAACGTACTAAAATCGTGGCCCAGGCGCAGGCGGAAATTGAAGCCGAGCGTAAACGTGCCCGTGAAGAGCTGCGTAAGCAAGTTGCTATCCTGGCTGTTGCTGGCGCCGAGAAGATCATCGAACGTTCCGTGGATGAAGCTGCTAACAGCGACATCGTGGATAAACTTGTCGCTGAACTGTAA", + "dna_sequence_length": 471, + "functions": [ + "F0 sector of membrane-bound ATP synthase, subunit b" + ], + "id": "CDS_3685", + "location": [ + [ + "NC_000913", + 3920888, + "-", + 471 + ] + ], + "md5": "85cb64a996600b20e6fadb0d05ee78b5", + "parent_gene": "", + "protein_md5": "e6ab163f9b7f7c6d5de86808c420762e", + "protein_translation": "MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012220" + ], + [ + "gene_synonym", + "ECK3730" + ], + [ + "gene_synonym", + "EcoGene:EG10102" + ], + [ + "gene_synonym", + "GI:16131605" + ], + [ + "gene_synonym", + "GeneID:948253" + ], + [ + "gene_synonym", + "JW3715" + ], + [ + "gene_synonym", + "NP_418193.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68699" + ], + [ + "gene_synonym", + "atpE" + ], + [ + "gene_synonym", + "b3737" + ], + [ + "gene_synonym", + "papH" + ], + [ + "gene_synonym", + "uncE" + ] + ], + "dna_sequence": "ATGGAAAACCTGAATATGGATCTGCTGTACATGGCTGCCGCTGTGATGATGGGTCTGGCGGCAATCGGTGCTGCGATCGGTATCGGCATCCTCGGGGGTAAATTCCTGGAAGGCGCAGCGCGTCAACCTGATCTGATTCCTCTGCTGCGTACTCAGTTCTTTATCGTTATGGGTCTGGTGGATGCTATCCCGATGATCGCTGTAGGTCTGGGTCTGTACGTGATGTTCGCTGTCGCGTAG", + "dna_sequence_length": 240, + "functions": [ + "F0 sector of membrane-bound ATP synthase, subunit c" + ], + "id": "CDS_3686", + "location": [ + [ + "NC_000913", + 3921189, + "-", + 240 + ] + ], + "md5": "8cc236bb40451f64bfbc013493156030", + "parent_gene": "", + "protein_md5": "56b533cc370c1e28d908debdcf79489b", + "protein_translation": "MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA", + "protein_translation_length": 79, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012222" + ], + [ + "gene_synonym", + "ECK3731" + ], + [ + "gene_synonym", + "EcoGene:EG10099" + ], + [ + "gene_synonym", + "GI:16131606" + ], + [ + "gene_synonym", + "GeneID:948252" + ], + [ + "gene_synonym", + "JW3716" + ], + [ + "gene_synonym", + "NP_418194.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB98" + ], + [ + "gene_synonym", + "atpB" + ], + [ + "gene_synonym", + "b3738" + ], + [ + "gene_synonym", + "papD" + ], + [ + "gene_synonym", + "uncB" + ] + ], + "dna_sequence": "ATGGCTTCAGAAAATATGACGCCGCAGGATTACATAGGACACCACCTGAATAACCTTCAGCTGGACCTGCGTACATTCTCGCTGGTGGATCCACAAAACCCCCCAGCCACCTTCTGGACAATCAATATTGACTCCATGTTCTTCTCGGTGGTGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGACATGTACCATGGCAAAAGCAAGCTGATTGCTCCGCTGGCCCTGACGATCTTCGTCTGGGTATTCCTGATGAACCTGATGGATTTACTGCCTATCGACCTGCTGCCGTACATTGCTGAACATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTGGGCGTATTTATCCTGATTCTGTTCTACAGCATCAAAATGAAAGGCATCGGCGGCTTCACGAAAGAGTTGACGCTGCAGCCGTTCAATCACTGGGCGTTCATTCCTGTCAACTTAATCCTTGAAGGGGTAAGCCTGCTGTCCAAACCAGTTTCACTCGGTTTGCGACTGTTCGGTAACATGTATGCCGGTGAGCTGATTTTCATTCTGATTGCTGGTCTGTTGCCGTGGTGGTCACAGTGGATCCTGAATGTGCCGTGGGCCATTTTCCACATCCTGATCATTACGCTGCAAGCCTTCATCTTCATGGTTCTGACGATCGTCTATCTGTCGATGGCGTCTGAAGAACATTAA", + "dna_sequence_length": 816, + "functions": [ + "F0 sector of membrane-bound ATP synthase, subunit a" + ], + "id": "CDS_3687", + "location": [ + [ + "NC_000913", + 3922051, + "-", + 816 + ] + ], + "md5": "84ceb80fd90d0d63997138586633a5b1", + "parent_gene": "", + "protein_md5": "cffe2ccf494694423271744bb8ba736c", + "protein_translation": "MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012224" + ], + [ + "gene_synonym", + "ECK3732" + ], + [ + "gene_synonym", + "EcoGene:EG10106" + ], + [ + "gene_synonym", + "GI:90111645" + ], + [ + "gene_synonym", + "GeneID:948251" + ], + [ + "gene_synonym", + "JW5611" + ], + [ + "gene_synonym", + "NP_418195.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABC0" + ], + [ + "gene_synonym", + "atpI" + ], + [ + "gene_synonym", + "b3739" + ], + [ + "gene_synonym", + "uncI" + ] + ], + "dna_sequence": "ATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGCTTCTGCTCGTTCAGTTACTGGTGGTGATAGCAAGTGGATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATGTTGGTGTTACTGGTGGTGGCGTTGGCGGTTTTAAAGGCGGTATTCTTGCCGCTGATCGTTACGTGGGTTTTGGTGCTGGTGGTTCAGATACTGGCACCGGCTGTAATTAACAACAAAGGGTAA", + "dna_sequence_length": 381, + "functions": [ + "ATP synthase, membrane-bound accessory factor" + ], + "id": "CDS_3688", + "location": [ + [ + "NC_000913", + 3922440, + "-", + 381 + ] + ], + "md5": "7968e5d8e36288a5fc164d1e755ecadc", + "parent_gene": "", + "protein_md5": "e48c3498685547481d38ac4b6ecf0af5", + "protein_translation": "MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGGLAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFLPLIVTWVLVLVVQILAPAVINNKG", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012229" + ], + [ + "gene_synonym", + "ECK3733" + ], + [ + "gene_synonym", + "EcoGene:EG10376" + ], + [ + "gene_synonym", + "GI:16131608" + ], + [ + "gene_synonym", + "GeneID:948250" + ], + [ + "gene_synonym", + "JW3718" + ], + [ + "gene_synonym", + "NP_418196.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U5" + ], + [ + "gene_synonym", + "b3740" + ], + [ + "gene_synonym", + "gidB" + ], + [ + "gene_synonym", + "rsmG" + ] + ], + "dna_sequence": "GTGCTCAACAAACTCTCCTTACTGCTGAAAGACGCAGGTATTTCGCTTACCGATCACCAGAAAAACCAGCTTATTGCCTACGTGAATATGCTGCATAAATGGAACAAAGCGTACAACCTGACTTCGGTCCGCGATCCTAATGAGATGCTGGTACGCCATATTCTCGATAGCATTGTGGTGGCACCGTATCTGCAAGGTGAACGGTTTATCGATGTCGGCACCGGACCAGGACTGCCAGGCATTCCACTCTCTATCGTGCGTCCTGAAGCCCATTTCACTCTGTTGGATAGCCTTGGTAAACGCGTGCGTTTCCTTCGTCAGGTGCAACATGAGCTTAAACTGGAGAATATTGAACCAGTACAGAGCAGGGTAGAAGAGTTTCCTTCAGAGCCGCCATTTGATGGCGTAATTAGCCGCGCTTTTGCCTCTCTGAACGATATGGTGAGCTGGTGCCACCATCTTCCTGGTGAGCAAGGCCGTTTCTACGCGCTGAAAGGGCAAATGCCGGAAGATGAAATCGCTTTGTTGCCCGAAGAATATCAGGTCGAATCAGTGGTTAAACTTCAGGTTCCAGCCCTGGATGGCGAACGTCATCTGGTGGTGATTAAAGCAAATAAAATTTAA", + "dna_sequence_length": 624, + "functions": [ + "16S rRNA m(7)G527 methyltransferase, SAM-dependent", + "glucose-inhibited cell-division protein" + ], + "id": "CDS_3689", + "location": [ + [ + "NC_000913", + 3923680, + "-", + 624 + ] + ], + "md5": "c30425a24d12722a585d9bafd627a451", + "parent_gene": "", + "protein_md5": "724e9a4c8f60866ed92d24f2d93456d7", + "protein_translation": "MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012231" + ], + [ + "gene_synonym", + "ECK3734" + ], + [ + "gene_synonym", + "EcoGene:EG10375" + ], + [ + "gene_synonym", + "GI:16131609" + ], + [ + "gene_synonym", + "GeneID:948248" + ], + [ + "gene_synonym", + "JW3719" + ], + [ + "gene_synonym", + "NP_418197.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U3" + ], + [ + "gene_synonym", + "b3741" + ], + [ + "gene_synonym", + "gidA" + ], + [ + "gene_synonym", + "mnmB" + ], + [ + "gene_synonym", + "mnmG" + ], + [ + "gene_synonym", + "trmF" + ] + ], + "dna_sequence": "ATGTTTTATCCGGATCCTTTTGACGTCATCATCATTGGCGGGGGTCATGCAGGCACCGAGGCCGCGATGGCCGCGGCGCGTATGGGTCAACAGACTCTGCTTTTGACACACAATATCGACACTCTGGGGCAGATGAGCTGCAACCCGGCGATCGGCGGTATTGGGAAGGGACATCTGGTAAAAGAAGTGGATGCACTCGGCGGTCTGATGGCGAAAGCGATCGATCAGGCGGGTATCCAGTTTAGGATACTAAACGCAAGCAAAGGACCGGCGGTTCGCGCTACCCGAGCTCAGGCGGATCGTGTGCTCTACCGTCAGGCGGTACGTACGGCGCTGGAGAACCAACCGAACCTGATGATCTTCCAGCAGGCGGTTGAAGATCTTATTGTCGAAAACGATCGCGTGGTCGGTGCTGTTACCCAAATGGGACTGAAGTTCCGTGCCAAAGCCGTCGTGCTCACCGTTGGGACGTTCCTCGACGGTAAAATTCATATCGGTCTGGATAATTACAGCGGTGGCCGTGCTGGTGATCCGCCGTCCATTCCGCTTTCTCGCCGTTTGCGTGAACTGCCGCTGCGCGTTGGTCGTCTGAAAACCGGGACACCACCGCGTATTGATGCTCGAACCATCGACTTTAGCGTACTGGCGCAACAGCATGGCGATAACCCAATGCCGGTATTCTCGTTTATGGGCAATGCGTCCCAGCATCCCCAGCAGGTGCCGTGTTATATCACTCATACCAACGAGAAAACCCATGATGTGATCCGCAGTAACCTCGATCGTAGCCCAATGTACGCAGGGGTGATCGAAGGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGTTCGATGTGCAGATGCAAATCGTCCGCTCTATGCAGGGGATGGAAAACGCGAAGATCGTGCGTCCGGGTTATGCCATTGAGTATGACTTCTTCGATCCTCGCGACCTGAAACCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTGGTCAGATTAACGGCACTACCGGTTACGAAGAAGCCGCTGCGCAAGGTTTGCTGGCCGGTCTTAACGCTGCCCGTCTGTCTGCTGACAAAGAAGGTTGGGCTCCGGCACGTTCTCAGGCGTATCTCGGCGTACTAGTTGATGACCTGTGCACTTTAGGAACCAAAGAACCGTATCGTATGTTTACTTCGCGCGCAGAATATCGTCTGATGCTACGCGAAGATAATGCGGATCTGCGTTTGACTGAAATCGGTCGTGAACTGGGCCTGGTGGATGACGAACGTTGGGCGCGCTTTAACGAGAAACTTGAGAATATCGAGCGTGAGCGTCAGCGTCTGAAATCGACCTGGGTAACCCCGTCGGCGGAAGCTGCAGCCGAAGTGAATGCTCACCTGACTGCGCCGCTTTCCCGTGAAGCCAGTGGTGAAGATCTGCTGCGTCGTCCGGAAATGACTTATGAAAAATTAACCACGCTGACGCCGTTTGCCCCTGCGTTGACAGACGAACAGGCGGCGGAACAGGTTGAGATTCAGGTTAAATACGAAGGTTATATCGCGCGCCAGCAAGATGAGATCGAAAAGCAGCTGCGTAACGAGAACACCCTGCTACCCGCGACACTGGATTACCGCCAGGTATCCGGTCTTTCTAACGAAGTGATCGCCAAACTTAACGATCACAAACCAGCCTCTATCGGCCAAGCTTCGCGTATTTCTGGCGTCACGCCTGCGGCCATCTCCATTCTGCTGGTGTGGCTGAAAAAACAGGGTATGCTGCGTCGTAGCGCATAA", + "dna_sequence_length": 1890, + "functions": [ + "5-methylaminomethyl-2-thiouridine modification at tRNA U34" + ], + "id": "CDS_3690", + "location": [ + [ + "NC_000913", + 3925633, + "-", + 1890 + ] + ], + "md5": "6c421083db703c35ba8cb4d296274baf", + "parent_gene": "", + "protein_md5": "4a322e9c133bccec0d2cf7d3cec1e706", + "protein_translation": "MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGMLRRSA", + "protein_translation_length": 629, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012235" + ], + [ + "gene_synonym", + "ECK3736" + ], + [ + "gene_synonym", + "EcoGene:EG11199" + ], + [ + "gene_synonym", + "GI:16131610" + ], + [ + "gene_synonym", + "GeneID:948249" + ], + [ + "gene_synonym", + "JW3720" + ], + [ + "gene_synonym", + "NP_418198.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03817" + ], + [ + "gene_synonym", + "b3742" + ], + [ + "gene_synonym", + "mioC" + ], + [ + "gene_synonym", + "yieB" + ] + ], + "dna_sequence": "ATGGCAGATATCACTCTTATCAGCGGCAGCACCCTCGGCGGTGCCGAATATGTAGCAGAACACCTGGCTGAAAAGCTGGAAGAGGCGGGTTTTACCACCGAAACGCTGCACGGTCCGCTGTTAGAAGATTTACCTGCCTCAGGGATCTGGCTGGTTATCAGCTCCACCCACGGTGCCGGAGATATTCCGGACAACCTTTCTCCTTTCTATGAAGCATTGCAGGAACAGAAGCCCGATCTTTCTGCAGTCCGCTTTGGCGCAATCGGTATTGGCAGTCGTGAATATGACACCTTTTGTGGGGCTATCGATAAACTCGAGGCAGAACTCAAAAATTCCGGTGCAAAACAGACAGGCGAAACACTGAAGATCAACATTCTTGATCACGACATTCCGGAAGATCCGGCAGAAGAATGGCTGGGATCGTGGGTTAATTTACTCAAATAA", + "dna_sequence_length": 444, + "functions": [ + "FMN-binding protein MioC" + ], + "id": "CDS_3691", + "location": [ + [ + "NC_000913", + 3926455, + "-", + 444 + ] + ], + "md5": "9cf2c8b20e1b692c8ecb830ec347b0ff", + "parent_gene": "", + "protein_md5": "4bfc2ed15c60bb6bf4d68fc54f668b53", + "protein_translation": "MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012237" + ], + [ + "gene_synonym", + "ECK3737" + ], + [ + "gene_synonym", + "EcoGene:EG10093" + ], + [ + "gene_synonym", + "GI:16131611" + ], + [ + "gene_synonym", + "GeneID:948259" + ], + [ + "gene_synonym", + "JW3721" + ], + [ + "gene_synonym", + "NP_418199.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACI6" + ], + [ + "gene_synonym", + "asnC" + ], + [ + "gene_synonym", + "b3743" + ] + ], + "dna_sequence": "ATGGAAAATTATCTGATCGACAATCTGGACCGTGGCATCCTGGAAGCATTAATGGGCAATGCGCGCACCGCTTACGCCGAACTGGCGAAACAATTTGGCGTCAGTCCGGGGACGATTCACGTTCGAGTAGAGAAAATGAAGCAGGCGGGGATCATTACCGGGGCGCGTATTGATGTCAGCCCGAAGCAGCTCGGTTATGACGTAGGCTGCTTTATCGGCATTATATTAAAGAGCGCCAAAGACTACCCTTCCGCGCTGGCAAAGCTGGAAAGCCTTGATGAAGTCACTGAAGCCTATTACACAACCGGCCACTACAGCATCTTTATAAAAGTGATGTGCCGTTCGATCGACGCTCTCCAGCATGTACTTATCAACAAGATCCAAACAATTGATGAAATTCAGTCCACCGAGACATTGATCGTCCTGCAAAACCCGATCATGCGTACCATCAAGCCCTGA", + "dna_sequence_length": 459, + "functions": [ + "transcriptional activator of asnA", + "autorepressor" + ], + "id": "CDS_3692", + "location": [ + [ + "NC_000913", + 3927003, + "-", + 459 + ] + ], + "md5": "f054e6beee48ecf4e320df6bf8e0a908", + "parent_gene": "", + "protein_md5": "8aa5523875d6f43ba583137b1e8cb515", + "protein_translation": "MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP", + "protein_translation_length": 152, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012242" + ], + [ + "gene_synonym", + "ECK3738" + ], + [ + "gene_synonym", + "EcoGene:EG10091" + ], + [ + "gene_synonym", + "GI:16131612" + ], + [ + "gene_synonym", + "GeneID:948258" + ], + [ + "gene_synonym", + "JW3722" + ], + [ + "gene_synonym", + "NP_418200.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00963" + ], + [ + "gene_synonym", + "asnA" + ], + [ + "gene_synonym", + "b3744" + ] + ], + "dna_sequence": "ATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAATGGGCGACGGTGAGCGTCAATTCTCGACTCTGAAAAGCACGGTAGAGGCGATCTGGGCGGGAATTAAAGCAACCGAAGCTGCGGTTAGCGAAGAGTTTGGCCTGGCACCGTTCCTGCCGGATCAGATCCACTTCGTACACAGCCAGGAGTTACTGTCTCGTTATCCGGATCTTGATGCCAAAGGGCGTGAGCGGGCGATAGCGAAAGATCTTGGCGCGGTATTCCTTGTCGGGATTGGCGGCAAGCTGAGCGATGGTCATCGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAA", + "dna_sequence_length": 993, + "functions": [ + "asparagine synthetase A" + ], + "id": "CDS_3693", + "location": [ + [ + "NC_000913", + 3927155, + "+", + 993 + ] + ], + "md5": "ffd86e3163f26565b24e11e03d686b37", + "parent_gene": "", + "protein_md5": "dfc2b4a3f3b43c8ba9564d8a53e155e1", + "protein_translation": "MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012244" + ], + [ + "gene_synonym", + "ECK3739" + ], + [ + "gene_synonym", + "EcoGene:EG11730" + ], + [ + "gene_synonym", + "GI:49176398" + ], + [ + "gene_synonym", + "GeneID:948257" + ], + [ + "gene_synonym", + "JW5610" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADN0" + ], + [ + "gene_synonym", + "YP_026243.1" + ], + [ + "gene_synonym", + "b3745" + ], + [ + "gene_synonym", + "viaA" + ], + [ + "gene_synonym", + "yieD" + ], + [ + "gene_synonym", + "yieM" + ] + ], + "dna_sequence": "ATGCTAACGCTGGATACGCTTAATGTGATGCTGGCCGTCAGCGAAGAGGGATTGATCGAAGAGATGATCATCGCACTGCTGGCCTCACCGCAGCTGGCGGTCTTCTTTGAAAAATTCCCACGCCTGAAGGCGGCAATCACTGATGATGTTCCCCGCTGGCGTGAAGCGCTGCGCAGTCGGCTGAAAGATGCCCGAGTCCCGCCGGAACTCACCGAAGAGGTGATGTGCTATCAGCAAAGCCAGCTCCTCTCCACGCCACAGTTTATTGTGCAGCTACCACAGATCCTGGACTTACTGCATCGTCTGAATTCTCCATGGGCAGAACAAGCCCGACAGTTGGTTGATGCTAACAGCACGATCACTTCAGCGTTACACACGCTTTTTCTCCAGCGTTGGCGTTTAAGTCTGATCGTGCAAGCAACGACGTTAAATCAACAGCTATTAGAAGAAGAACGCGAACAACTGTTGAGTGAAGTTCAGGAACGCATGACGCTGAGCGGACAACTTGAACCGATTCTCGCAGATAACAATACTGCAGCTGGTCGTCTGTGGGATATGAGCGCCGGTCAGCTTAAACGTGGCGACTATCAGTTGATTGTGAAATACGGTGAATTTCTTAACGAACAGCCGGAACTGAAACGCCTGGCAGAGCAGCTGGGGCGTTCTCGGGAAGCCAAATCAATACCGCGCAACGATGCGCAGATGGAAACCTTCCGCACCATGGTGCGCGAACCGGCGACGGTTCCTGAGCAGGTTGATGGTCTGCAACAAAGCGATGATATTTTACGTCTCCTGCCGCCAGAACTGGCGACACTAGGGATAACGGAACTGGAGTATGAGTTTTACCGTCGGCTGGTGGAAAAACAGTTGCTCACCTATCGCCTGCACGGTGAGTCGTGGCGTGAAAAAGTGATCGAACGTCCGGTGGTACATAAAGATTACGATGAACAGCCGCGCGGGCCGTTTATTGTCTGTGTGGATACTTCCGGCTCAATGGGCGGCTTTAATGAACAGTGTGCGAAAGCGTTCTGCCTGGCCTTGATGCGCATTGCTCTCGCAGAAAACCGGCGCTGCTATATTATGCTATTTTCCACCGAGATCGTCCGTTATGAGCTTTCAGGCCCACAAGGCATCGAACAAGCAATCCGTTTTTTAAGCCAGCAGTTTCGTGGCGGCACCGATCTTGCCAGTTGTTTTCGCGCCATTATGGAACGCTTGCAAAGCAGGGAATGGTTTGATGCCGATGCGGTGGTGATTTCTGATTTTATCGCTCAGCGGTTGCCTGACGACGTGACGAGTAAAGTGAAAGAGCTGCAGCGGGTACATCAGCATCGCTTTCATGCCGTGGCGATGTCGGCACACGGCAAACCCGGCATCATGCGCATTTTCGATCATATCTGGCGCTTTGATACCGGGATGCGAAGCCGCCTGCTCAGACGCTGGCGGCGATAA", + "dna_sequence_length": 1452, + "functions": [ + "stimulator of RavA ATPase activity", + "von Willebrand factor domain protein" + ], + "id": "CDS_3694", + "location": [ + [ + "NC_000913", + 3929603, + "-", + 1452 + ] + ], + "md5": "2c65aab43035b82bd452293e832ef4f2", + "parent_gene": "", + "protein_md5": "3f68597921753db6de1a80dbcc936058", + "protein_translation": "MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKAAITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRLNSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQLGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012247" + ], + [ + "gene_synonym", + "ECK3740" + ], + [ + "gene_synonym", + "EcoGene:EG11731" + ], + [ + "gene_synonym", + "GI:90111646" + ], + [ + "gene_synonym", + "GeneID:948256" + ], + [ + "gene_synonym", + "JW3725" + ], + [ + "gene_synonym", + "NP_418202.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31473" + ], + [ + "gene_synonym", + "b3746" + ], + [ + "gene_synonym", + "ravA" + ], + [ + "gene_synonym", + "yieN" + ] + ], + "dna_sequence": "ATGGCTCACCCTCATTTATTAGCGGAAAGAATTTCCCGCCTGAGCAGTTCGTTGGAAAAGGGGCTTTATGAACGTAGCCACGCCATCCGCTTGTGTTTATTAGCGGCATTAAGTGGTGAAAGTGTGTTCCTCCTTGGCCCGCCAGGTATTGCCAAAAGTTTGATCGCCCGGCGCTTAAAATTCGCCTTTCAGAATGCCCGCGCGTTTGAATATCTGATGACCCGCTTCTCCACGCCGGAAGAAGTTTTTGGTCCCCTTTCTATTCAGGCGCTAAAAGATGAAGGGCGCTATGAACGTTTAACCAGCGGTTACCTGCCGGAAGCAGAAATTGTCTTTCTGGATGAGATCTGGAAAGCGGGCCCGGCAATTCTTAATACCTTGCTCACCGCCATTAACGAGCGCCAGTTCCGCAACGGTGCACACGTAGAAAAAATCCCGATGCGTCTGCTGGTGGCGGCCTCCAACGAGCTGCCGGAAGCAGACAGCAGTCTGGAAGCGTTATATGACCGCATGCTGATTCGTCTGTGGTTAGATAAAGTGCAGGATAAAGCGAATTTCCGCTCCATGCTGACCAGTCAACAGGATGAAAACGACAATCCGGTTCCTGATGCCTTGCAGGTCACAGATGAAGAATATGAACGCTGGCAGAAAGAGATTGGTGAAATTACGCTGCCCGATCATGTATTTGAGCTGATTTTTATGCTGCGCCAGCAACTGGATAAATTACCGGATGCGCCTTATGTCTCGGATCGTCGCTGGAAAAAAGCGATCCGATTATTGCAGGCCAGCGCCTTTTTTAGCGGTCGCAGTGCTGTTGCCCCGGTAGATCTCATTTTGCTGAAAGATTGCCTGTGGTATGACGCGCAAAGCCTGAATTTGATACAACAACAAATTGATGTATTGATGACCGGTCACGCCTGGCAACAGCAAGGGATGTTGACTCGCCTTGGCGCGATTGTGCAACGTCACCTGCAACTCCAGCAGCAACAAAGCGATAAAACAGCCTTAACGGTAATTCGTCTGGGCGGCATTTTCAGCCGTCGTCAGCAGTATCAACTTCCTGTTAACGTTACTGCTTCCACTCTGACTCTACTGCTGCAAAAACCGTTAAAACTGCATGATATGGAAGTGGTTCATATCTCCTTTGAGCGTAGCGCGCTGGAACAGTGGCTGAGCAAAGGTGGTGAAATTCGCGGTAAACTGAACGGTATCGGCTTTGCCCAGAAACTGAATCTGGAAGTTGATAGCGCCCAACATCTTGTCGTTCGCGATGTAAGTTTACAAGGCAGTACGCTGGCACTTCCCGGTTCATCGGCTGAAGGTCTGCCTGGTGAAATAAAACAACAACTGGAAGAGCTTGAAAGCGACTGGCGCAAGCAACACGCTTTATTCAGCGAACAGCAAAAATGTCTGTTTATCCCTGGCGACTGGTTAGGTCGCATTGAAGCCAGCCTACAGGATGTCGGTGCACAGATTCGCCAGGCACAACAATGCTAA", + "dna_sequence_length": 1497, + "functions": [ + "hexameric AAA+ MoxR family ATPase, putative molecular chaperone" + ], + "id": "CDS_3695", + "location": [ + [ + "NC_000913", + 3931093, + "-", + 1497 + ] + ], + "md5": "ecf9fa3c0e207a555a4a5edd97681b1e", + "parent_gene": "", + "protein_md5": "301f47abd1f028ba65c3bac5d439af81", + "protein_translation": "MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC", + "protein_translation_length": 498, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012251" + ], + [ + "gene_synonym", + "ECK3741" + ], + [ + "gene_synonym", + "EcoGene:EG11541" + ], + [ + "gene_synonym", + "GI:49176400" + ], + [ + "gene_synonym", + "GeneID:948255" + ], + [ + "gene_synonym", + "JW5609" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63183" + ], + [ + "gene_synonym", + "YP_026244.1" + ], + [ + "gene_synonym", + "b3747" + ], + [ + "gene_synonym", + "kup" + ], + [ + "gene_synonym", + "trkD" + ] + ], + "dna_sequence": "ATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCTCACCTTCGTGATGCGGGCAGATAACGCCGGTGAGGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCAATTATCGTTCTCACTTTATTATTTATGATTCAAAAACATGGCACGGCTATGGTCGGTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAACGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGACCCTTAATTACTTCGGTCAGGGAGCGCTGTTGTTAAAGAACCCGGAAGCGATTAAGAACCCGTTCTTCCTGTTGGCACCGGACTGGGCGCTGATCCCGCTGCTGATCATCGCCGCACTGGCGACGGTAATTGCCTCGCAGGCGGTTATCTCTGGCGTCTTCTCATTGACGCGTCAGGCGGTACGTCTGGGATATTTGTCGCCGATGCGCATTATTCACACCTCCGAAATGGAGTCAGGGCAAATCTATATTCCGTTTGTGAACTGGATGCTCTATGTCGCGGTCGTGATTGTGATTGTCAGCTTTGAGCACTCCAGCAACCTGGCGGCGGCGTACGGGATTGCGGTGACCGGAACCATGGTGCTGACGTCTATTCTCTCGACTACCGTGGCACGTCAGAACTGGCACTGGAATAAGTATTTTGTTGCGCTGATCCTGATTGCTTTCCTTTGTGTCGATATTCCATTGTTCACCGCTAACCTCGATAAACTGCTCTCCGGCGGCTGGTTGCCATTGAGCCTCGGTACTGTGATGTTTATCGTGATGACCACCTGGAAGAGCGAGCGTTTCCGCTTGCTGCGGCGGATGCATGAACATGGTAACTCTCTGGAAGCGATGATTGCTTCGCTGGAGAAATCACCGCCTGTTCGCGTGCCCGGGACCGCGGTGTATATGTCGCGTGCAATCAACGTCATTCCCTTTGCGCTGATGCATAACCTTAAACATAACAAGGTATTGCATGAGCGGGTGATTCTGTTAACTCTGCGCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCATGAGTCGTTGATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAA", + "dna_sequence_length": 1869, + "functions": [ + "potassium transporter" + ], + "id": "CDS_3696", + "location": [ + [ + "NC_000913", + 3931316, + "+", + 1869 + ] + ], + "md5": "ca30747a3ea532f3d8bb5b14a9a32458", + "parent_gene": "", + "protein_md5": "a2ea77af70193144cfef5c74f92f70d7", + "protein_translation": "MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI", + "protein_translation_length": 622, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012256" + ], + [ + "gene_synonym", + "ECK3742" + ], + [ + "gene_synonym", + "EcoGene:EG10817" + ], + [ + "gene_synonym", + "GI:90111647" + ], + [ + "gene_synonym", + "GeneID:948267" + ], + [ + "gene_synonym", + "JW5857" + ], + [ + "gene_synonym", + "NP_418204.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04982" + ], + [ + "gene_synonym", + "b3748" + ], + [ + "gene_synonym", + "rbsD" + ], + [ + "gene_synonym", + "rbsP" + ] + ], + "dna_sequence": "ATGAAAAAAGGCACCGTTCTTAATTCTGATATTTCATCGGTGATCTCCCGTCTGGGACATACCGATACGCTGGTGGTGTGTGATGCTGGTTTACCCATCCCCAAAAGTACAACGCGTATCGATATGGCATTAACCCAGGGTGTACCTTCTTTTATGCAGGTGCTGGGCGTCGTCACAAATGAAATGCAGGTCGAGGCGGCCATTATCGCGGAAGAGATCAAACACCATAATCCGCAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGA", + "dna_sequence_length": 420, + "functions": [ + "D-ribose pyranase" + ], + "id": "CDS_3697", + "location": [ + [ + "NC_000913", + 3933351, + "+", + 420 + ] + ], + "md5": "24ca0877ed69f06c87c48c48b760053e", + "parent_gene": "", + "protein_md5": "224c9b5cddbe7cce94d4b0d9efb673f8", + "protein_translation": "MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012259" + ], + [ + "gene_synonym", + "ECK3743" + ], + [ + "gene_synonym", + "EcoGene:EG10814" + ], + [ + "gene_synonym", + "GI:16131617" + ], + [ + "gene_synonym", + "GeneID:948264" + ], + [ + "gene_synonym", + "JW3728" + ], + [ + "gene_synonym", + "NP_418205.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04983" + ], + [ + "gene_synonym", + "b3749" + ], + [ + "gene_synonym", + "rbsA" + ], + [ + "gene_synonym", + "rbsP" + ], + [ + "gene_synonym", + "rbsT" + ] + ], + "dna_sequence": "ATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATCCGGGCCGCGTGATGGCGCTGGTGGGCGAAAACGGCGCGGGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTCGTGAGTTTGTTAATCGCTTTGGCAAAATTGACTGGAAAACCATGTATGCCGAAGCGGATAAATTGCTGGCTAAACTTAACCTGCGCTTTAAAAGCGACAAGCTGGTGGGCGATCTTTCCATCGGTGACCAGCAAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATGACGTTACCGTTTTTCGTGATGGGCAATTTATTGCTGAGCGCGAAGTGGCATCACTGACCGAAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAAACGGCATTGTGTATATCTCCGAAGACCGTAAACGTGACGGTTTAGTGTTGGGCATGTCAGTAAAAGAGAACATGTCGCTGACAGCGCTGCGCTACTTCAGCCGCGCTGGCGGCAGTTTGAAGCATGCCGATGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAA", + "dna_sequence_length": 1506, + "functions": [ + "D-ribose ABC transporter ATPase" + ], + "id": "CDS_3698", + "location": [ + [ + "NC_000913", + 3933778, + "+", + 1506 + ] + ], + "md5": "da9c555b70b5b8dc27c17325d2dd0652", + "parent_gene": "", + "protein_md5": "23707f97023e8f1b82c6afef143a8cb8", + "protein_translation": "MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKLEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE", + "protein_translation_length": 501, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012261" + ], + [ + "gene_synonym", + "ECK3744" + ], + [ + "gene_synonym", + "EcoGene:EG10816" + ], + [ + "gene_synonym", + "GI:16131618" + ], + [ + "gene_synonym", + "GeneID:948262" + ], + [ + "gene_synonym", + "JW3729" + ], + [ + "gene_synonym", + "NP_418206.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI1" + ], + [ + "gene_synonym", + "b3750" + ], + [ + "gene_synonym", + "rbsC" + ], + [ + "gene_synonym", + "rbsP" + ], + [ + "gene_synonym", + "rbsT" + ] + ], + "dna_sequence": "ATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGCTACGCTGGTTATGATGCTTTTACTGCGCGGCGTGACCATGGTTTATACCAACGGTAGCCCAGTGAATACCGGCTTTACTGAGAACGCCGATCTGTTTGGCTGGTTTGGTATTGGTCGTCCGCTGGGCGTACCGACGCCAGTCTGGATCATGGGGATTGTCTTCCTCGCGGCCTGGTACATGCTGCATCACACGCGTCTGGGGCGTTACATCTACGCGCTGGGCGGCAACGAAGCGGCAACGCGTCTTTCTGGTATCAACGTCAATAAAATCAAAATCATCGTCTATTCTCTTTGTGGTCTGCTGGCATCGCTGGCCGGGATCATTGAAGTGGCGCGTCTCTCCTCCGCACAACCCACGGCGGGGACTGGCTATGAGCTGGATGCTATTGCTGCGGTGGTTCTGGGCGGTACGAGTCTGGCGGGCGGAAAAGGTCGCATTGTTGGGACGTTGATCGGCGCATTAATTCTTGGCTTCCTTAATAATGGATTGAATTTGTTAGGTGTTTCCTCCTATTACCAGATGATCGTCAAAGCGGTGGTGATTTTGCTGGCGGTGCTGGTAGACAACAAAAAGCAGTAA", + "dna_sequence_length": 966, + "functions": [ + "D-ribose ABC transporter permease" + ], + "id": "CDS_3699", + "location": [ + [ + "NC_000913", + 3935288, + "+", + 966 + ] + ], + "md5": "b161b0ddd9be046fe53ce0f6f7ca5e53", + "parent_gene": "", + "protein_md5": "9f0be77d9917763c8c42a8459a9228f5", + "protein_translation": "MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012264" + ], + [ + "gene_synonym", + "ECK3745" + ], + [ + "gene_synonym", + "EcoGene:EG10815" + ], + [ + "gene_synonym", + "GI:16131619" + ], + [ + "gene_synonym", + "GeneID:948261" + ], + [ + "gene_synonym", + "JW3730" + ], + [ + "gene_synonym", + "NP_418207.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02925" + ], + [ + "gene_synonym", + "b3751" + ], + [ + "gene_synonym", + "prlB" + ], + [ + "gene_synonym", + "rbsB" + ], + [ + "gene_synonym", + "rbsP" + ] + ], + "dna_sequence": "ATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGCTGGTGGTCTCCACGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGACTTAACCGTTCGCGGCACAAAAATTCTGCTGATTAACCCGACCGACTCCGACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAGGCATTGCTGGTACATCCGCAGCCCGTGAACGTGGCGAAGGCTTCCAGCAGGCCGTTGCTGCTCACAAGTTTAATGTTCTTGCCAGCCAGCCAGCAGATTTTGATCGCATTAAAGGTTTGAACGTAATGCAGAACCTGTTGACCGCTCATCCGGATGTTCAGGCTGTATTCGCGCAGAATGATGAAATGGCGCTGGGCGCGCTGCGCGCACTGCAAACTGCCGGTAAATCGGATGTGATGGTCGTCGGATTTGACGGTACACCGGATGGCGAAAAAGCGGTGAATGATGGCAAACTAGCAGCGACTATCGCTCAGCTACCCGATCAGATTGGCGCGAAAGGCGTCGAAACCGCAGATAAAGTGCTGAAAGGCGAGAAAGTTCAGGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAG", + "dna_sequence_length": 891, + "functions": [ + "D-ribose ABC transporter periplasmic binding protein", + "ribose chemotaxis receptor" + ], + "id": "CDS_3700", + "location": [ + [ + "NC_000913", + 3936278, + "+", + 891 + ] + ], + "md5": "9eda04ccefa1493768923cc3539ce461", + "parent_gene": "", + "protein_md5": "c907cf8fadfa1c36047887a02c27fd25", + "protein_translation": "MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012266" + ], + [ + "gene_synonym", + "ECK3746" + ], + [ + "gene_synonym", + "EcoGene:EG10818" + ], + [ + "gene_synonym", + "GI:16131620" + ], + [ + "gene_synonym", + "GeneID:948260" + ], + [ + "gene_synonym", + "JW3731" + ], + [ + "gene_synonym", + "NP_418208.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J6" + ], + [ + "gene_synonym", + "b3752" + ], + [ + "gene_synonym", + "rbsK" + ] + ], + "dna_sequence": "ATGCAAAACGCAGGCAGCCTCGTTGTTCTTGGCAGCATTAATGCTGACCACATTCTTAATCTTCAATCTTTTCCTACTCCAGGCGAAACCGTAACCGGTAACCACTATCAGGTTGCATTTGGCGGCAAAGGCGCGAATCAGGCTGTGGCTGCTGGGCGTAGCGGTGCGAATATCGCGTTTATTGCCTGTACGGGTGATGACAGCATTGGTGAGAGCGTTCGCCAGCAGCTCGCCACTGATAACATTGATATTACTCCGGTCAGCGTGATCAAAGGCGAATCAACAGGTGTGGCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAATAAGACTATCGTTGCGCTTAACCCGGCTCCGGCTCGCGAACTTCCTGACGAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGAAAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAACCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGA", + "dna_sequence_length": 930, + "functions": [ + "ribokinase" + ], + "id": "CDS_3701", + "location": [ + [ + "NC_000913", + 3937294, + "+", + 930 + ] + ], + "md5": "c20f73b11e9d91a6306bd28338615aa9", + "parent_gene": "", + "protein_md5": "41d734846aafe532ef6a0c049f152afd", + "protein_translation": "MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012271" + ], + [ + "gene_synonym", + "ECK3747" + ], + [ + "gene_synonym", + "EcoGene:EG10819" + ], + [ + "gene_synonym", + "GI:16131621" + ], + [ + "gene_synonym", + "GeneID:948266" + ], + [ + "gene_synonym", + "JW3732" + ], + [ + "gene_synonym", + "NP_418209.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACQ0" + ], + [ + "gene_synonym", + "b3753" + ], + [ + "gene_synonym", + "rbsR" + ] + ], + "dna_sequence": "TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAG", + "dna_sequence_length": 993, + "functions": [ + "transcriptional repressor of ribose metabolism" + ], + "id": "CDS_3702", + "location": [ + [ + "NC_000913", + 3938227, + "+", + 993 + ] + ], + "md5": "29d1f57b3d4ad31089a313f77bf2d3fb", + "parent_gene": "", + "protein_md5": "dc1e91f836209d60e254769b84a92a0f", + "protein_translation": "MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012273" + ], + [ + "gene_synonym", + "ECK3748" + ], + [ + "gene_synonym", + "EcoGene:EG11732" + ], + [ + "gene_synonym", + "GI:16131622" + ], + [ + "gene_synonym", + "GeneID:948265" + ], + [ + "gene_synonym", + "JW3733" + ], + [ + "gene_synonym", + "NP_418210.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31474" + ], + [ + "gene_synonym", + "b3754" + ], + [ + "gene_synonym", + "hsrA" + ], + [ + "gene_synonym", + "yieO" + ] + ], + "dna_sequence": "ATGAGCGATAAAAAGAAGCGCAGTATGGCGGGTTTGCCGTGGATCGCGGCGATGGCCTTCTTCATGCAGGCACTTGATGCCACTATTCTTAATACCGCCTTACCCGCAATCGCTCATAGCCTTAATCGTTCTCCTCTCGCGATGCAATCAGCCATCATCAGTTATACGCTGACGGTGGCGATGCTTATTCCGGTAAGCGGATGGCTAGCCGATCGCTTCGGTACGCGTCGCATTTTTACCCTTGCCGTGAGTCTGTTCACATTGGGTTCTCTGGCCTGCGCACTTTCTAATTCGCTACCACAGCTGGTTGTCTTCCGGGTTATTCAGGGGATAGGCGGCGCAATGATGATGCCTGTTGCTCGGCTGGCCTTACTGCGCGCTTATCCTCGTAATGAACTTCTTCCAGTATTGAATTTTGTCGCCATGCCGGGTCTGGTGGGGCCAATTTTAGGCCCCGTTCTTGGCGGCGTGCTGGTCACCTGGGCAACCTGGCACTGGATATTTTTAATCAATATCCCCATAGGTATTGCGGGCCTTCTTTACGCGCGCAAACATATGCCCAATTTCACCACCGCACGACGCAGATTCGATATCACTGGCTTTTTGCTGTTTGGCCTCAGCCTTGTTCTCTTCTCAAGCGGAATAGAGCTATTCGGGGAAAAGATTGTCGCCAGCTGGATTGCCTTGACGGTAATTGTCACCAGCATCGGGTTACTGCTTCTCTATATTCTCCATGCACGACGCACGCCAAACCCATTAATTTCATTAGATTTATTTAAAACCCGCACTTTCTCGATCGGTATCGTAGGCAATATTGCAACCCGTCTGGGGACCGGCTGTGTACCGTTCCTTATGCCATTGATGTTACAGGTAGGATTTGGTTATCAGGCGTTTATTGCTGGCTGTATGATGGCACCGACAGCGTTAGGTTCCATTATTGCAAAATCGATGGTTACCCAAGTCTTACGTCGTCTGGGCTATCGCCATACGTTAGTGGGGATCACGGTGATTATTGGGCTAATGATCGCTCAGTTCTCTTTGCAATCACCAGCAATGGCTATATGGATGCTGATCTTGCCGTTGTTTATATTAGGGATGGCTATGTCGACGCAGTTTACCGCGATGAATACCATCACACTTGCCGATCTGACCGATGACAATGCCAGCAGCGGTAACAGTGTTCTGGCGGTCACGCAGCAACTGTCGATTAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTCCACTATACGTTTATCACAATGGGCATTATTACTGTTGCTTCAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTAAATCTAAGCCGAACCGCGTTCCATCAGAATCGGAGTAA", + "dna_sequence_length": 1428, + "functions": [ + "putative multidrug or homocysteine efflux system" + ], + "id": "CDS_3703", + "location": [ + [ + "NC_000913", + 3940612, + "-", + 1428 + ] + ], + "md5": "5daa1bf28c769984d0b1c24708f93eb1", + "parent_gene": "", + "protein_md5": "8e167920944e158f7908af8ca01732bf", + "protein_translation": "MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLLLYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNRVPSESE", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012275" + ], + [ + "gene_synonym", + "ECK3749" + ], + [ + "gene_synonym", + "EcoGene:EG11733" + ], + [ + "gene_synonym", + "GI:49176401" + ], + [ + "gene_synonym", + "GeneID:948263" + ], + [ + "gene_synonym", + "JW5608" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31475" + ], + [ + "gene_synonym", + "YP_026245.1" + ], + [ + "gene_synonym", + "b3755" + ], + [ + "gene_synonym", + "yieP" + ] + ], + "dna_sequence": "ATGCCTTTAAGCGCACAACAGTTAGCTGCACAGAAAAACCTTTCGTATGTTCTGGCTGAGAAGCTGGCGCAACGGATCTTAAAAGGTGAATATGAACCCGGCACCATTTTGCCCGGTGAGATTGAGCTGGGCGAGCAATTTGGAGTGAGTCGTACAGCGGTACGCGAAGCGGTCAAAACGTTAACGGCAAAAGGGATGGTTTTACCGCGACCGCGAATTGGTACTCGGGTCATGCCACAATCGAACTGGAATTTTCTTGATCAGGAATTGCTTACCTGGTGGATGACAGAAGAGAACTTTCATCAGGTCATCGATCACTTTCTGGTTATGCGTATCTGTCTGGAGCCGCAAGCCTGCCTACTGGCAGCAACGGTTGGCACCGCGGAACAGAAAGCGCATCTCAATACGTTAATGGCCGAAATGGCGGCATTAAAAGAGAACTTTCGCCGTGAACGCTGGATCGAAGTCGATATGGCCTGGCATGAGCATATCTATGAAATGAGCGCCAATCCGTTTTTGACCTCATTCGCCTCGCTATTCCATTCGGTTTATCACACTTACTTCACGTCAATTACCAGCGACACAGTGATAAAGCTGGATCTGCATCAGGCGATTGTCGATGCGATTATCCAAAGCGATGGCGACGCGGCATTTAAAGCTTGTCAGGCGCTGCTACGCTCACCTGATAAGTGA", + "dna_sequence_length": 693, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_3704", + "location": [ + [ + "NC_000913", + 3941327, + "-", + 693 + ] + ], + "md5": "3a7a1fe52591822c7aa8898829c5d857", + "parent_gene": "", + "protein_md5": "a5ae3776a8b5c14e52624dd28e568860", + "protein_translation": "MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAWHEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAFKACQALLRSPDK", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174109" + ], + [ + "gene_synonym", + "ECK3756" + ], + [ + "gene_synonym", + "EcoGene:EG11449" + ], + [ + "gene_synonym", + "GI:49176402" + ], + [ + "gene_synonym", + "GeneID:2847698" + ], + [ + "gene_synonym", + "JW5607" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8R9" + ], + [ + "gene_synonym", + "YP_026246.1" + ], + [ + "gene_synonym", + "apeR?" + ], + [ + "gene_synonym", + "b4480" + ], + [ + "gene_synonym", + "hdfR" + ], + [ + "gene_synonym", + "yifA" + ], + [ + "gene_synonym", + "yifD" + ] + ], + "dna_sequence": "GTGGATACGGAATTGTTAAAAACTTTCCTGGAAGTTAGCCGAACGCGTCACTTTGGTCGAGCGGCTGAATCGCTCTATCTGACCCAGTCAGCAGTGAGCTTTCGAATCAGACAACTGGAAAATCAACTGGGTGTGAACCTTTTCACCCGCCACAGAAACAATATCCGTTTAACCGCTGCCGGTGAAAAACTACTGCCTTATGCAGAAACGCTCATGAGCACCTGGCAGGCCGCCCGTAAGGAGGTGGCGCATACCTCACGACATAACGAGTTTTCTATCGGTGCCAGCGCCTCGTTGTGGGAATGTATGCTTAATCAGTGGCTGGGACGCTTGTATCAAAATCAGGATGCCCATACAGGCTTACAGTTCGAAGCGCGAATTGCCCAACGGCAGTCTCTGGTAAAACAGCTGCATGAACGCCAGCTTGATCTTCTTATTACCACTGAAGCGCCCAAAATGGACGAATTTAGTAGTCAGTTGCTGGGATATTTCACTTTAGCGCTTTATACCAGTGCCCCTTCAAAACTAAAGGGAGATCTTAATTATCTGCGACTTGAGTGGGGGCCAGATTTTCAACAGCATGAGGCAGGTTTGATCGGTGCTGACGAAGTGCCCATTCTGACAACCAGTTCTGCTGAACTGGCACAGCAACAGATTGCGATGCTTAATGGTTGCACCTGGCTACCCGTCAGCTGGGCGCGTAAAAAAGGCGGCCTGCATACCGTTGTCGATAGCACAACACTTTCACGGCCGCTTTATGCCATATGGCTGCAAAATAGCGATAAAAATGCGTTGATTCGCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAA", + "dna_sequence_length": 840, + "functions": [ + "flhDC operon transcriptional repressor" + ], + "id": "CDS_3705", + "location": [ + [ + "NC_000913", + 3947967, + "-", + 840 + ] + ], + "md5": "ae5b50f83fad1332f630c3bfc2c86df7", + "parent_gene": "", + "protein_md5": "389f3509dc3f8a27217aaa42c7c4cc36", + "protein_translation": "MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY", + "protein_translation_length": 279, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012298" + ], + [ + "gene_synonym", + "ECK3757" + ], + [ + "gene_synonym", + "EcoGene:EG11450" + ], + [ + "gene_synonym", + "GI:16131624" + ], + [ + "gene_synonym", + "GeneID:948274" + ], + [ + "gene_synonym", + "JW3737" + ], + [ + "gene_synonym", + "NP_418213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADN2" + ], + [ + "gene_synonym", + "b3764" + ], + [ + "gene_synonym", + "yifE" + ] + ], + "dna_sequence": "ATGGCGGAAAGCTTTACGACGACTAATCGATATTTCGACAATAAACATTATCCACGTGGATTCTCTCGTCATGGTGATTTCACCATCAAAGAGGCACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAA", + "dna_sequence_length": 339, + "functions": [ + "UPF0438 family protein" + ], + "id": "CDS_3706", + "location": [ + [ + "NC_000913", + 3948086, + "+", + 339 + ] + ], + "md5": "bb02cde15b63ccf78d9e2ab526d26f9d", + "parent_gene": "", + "protein_md5": "e9f588040b00f0a765a09edb29d4dc3c", + "protein_translation": "MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012300" + ], + [ + "gene_synonym", + "ECK3758" + ], + [ + "gene_synonym", + "EcoGene:EG11260" + ], + [ + "gene_synonym", + "GI:145698331" + ], + [ + "gene_synonym", + "GeneID:948282" + ], + [ + "gene_synonym", + "JW3738" + ], + [ + "gene_synonym", + "NP_418214.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22787" + ], + [ + "gene_synonym", + "b3765" + ], + [ + "gene_synonym", + "yifB" + ] + ], + "dna_sequence": "ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCGATCACTGTTGAGGTACATATCAGTAAAGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTATCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTGGCTCCAGCTGATCTGCCAAAAGAAGGGGGACGATATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGTCGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCAGAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTGCAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACAACATGATCTCAGTGATGTTATCGGTCAGGAACAAGGAAAGCGAGGACTGGAAATTACCGCTGCTGGCGGGCACAACCTTTTACTGATTGGGCCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTGTTGCCAGATTTAAGCAATGAAGAGGCACTGGAGAGTGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCGCTCACCTCATCACAGTGCATCGTTAACTGCGATGGTAGGCGGTGGCGCAATTCCAGGGCCCGGTGAAATTTCGCTGGCGCATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCCGGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTTGCGGCGATGAATCCCAGCCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGCCCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCACCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGAGAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAATGCCTGGCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCGATGTGGTTGGAAGGAACACTGATCCATCTGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAA", + "dna_sequence_length": 1521, + "functions": [ + "magnesium chelatase family protein and putative transcriptional regulator" + ], + "id": "CDS_3707", + "location": [ + [ + "NC_000913", + 3949969, + "-", + 1521 + ] + ], + "md5": "ec32bfbc41aee3de83eaf23a907068aa", + "parent_gene": "", + "protein_md5": "a05c0a7c588cb3e3f60c9530c5aa4e64", + "protein_translation": "MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLQAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAIDRLLIHLQKLLT", + "protein_translation_length": 506, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012307" + ], + [ + "gene_synonym", + "ECK3759" + ], + [ + "gene_synonym", + "EcoGene:EG11270" + ], + [ + "gene_synonym", + "GI:16131626" + ], + [ + "gene_synonym", + "GeneID:948283" + ], + [ + "gene_synonym", + "JW3739" + ], + [ + "gene_synonym", + "NP_418215.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62522" + ], + [ + "gene_synonym", + "b3766" + ], + [ + "gene_synonym", + "ilvL" + ] + ], + "dna_sequence": "ATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAG", + "dna_sequence_length": 99, + "functions": [ + "ilvG operon leader peptide" + ], + "id": "CDS_3708", + "location": [ + [ + "NC_000913", + 3950322, + "+", + 99 + ] + ], + "md5": "bf86766fd4e0d3ac30ca88ec9104641f", + "parent_gene": "", + "protein_md5": "a4c4ff7d036b31794f438746bc460e3d", + "protein_translation": "MTALLRVISLVVISVVVIIIPPCGAALGRGKA", + "protein_translation_length": 32, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4484" + ], + [ + "gene_synonym", + "EcoGene:EG14474" + ], + [ + "gene_synonym", + "GI:226524760" + ], + [ + "gene_synonym", + "GeneID:7751639" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P619" + ], + [ + "gene_synonym", + "YP_002791259.1" + ], + [ + "gene_synonym", + "b4669" + ], + [ + "gene_synonym", + "ilvX" + ] + ], + "dna_sequence": "ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA", + "dna_sequence_length": 51, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3709", + "location": [ + [ + "NC_000913", + 3950507, + "+", + 51 + ] + ], + "md5": "44028cea3369f75213f9c47d7c93c9fe", + "parent_gene": "", + "protein_md5": "b4ff8754ddd5cb345c036c16fef620d6", + "protein_translation": "MNNSTKFCFSRFRTGN", + "protein_translation_length": 16, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012309" + ], + [ + "gene_synonym", + "ASAP:ABE-0012311" + ], + [ + "gene_synonym", + "ASAP:ABE-0174552" + ], + [ + "gene_synonym", + "ECK3760" + ], + [ + "gene_synonym", + "EcoGene:EG10498" + ], + [ + "gene_synonym", + "GeneID:2847699" + ], + [ + "gene_synonym", + "JW3740" + ], + [ + "gene_synonym", + "JW3741" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00892" + ], + [ + "gene_synonym", + "b4488" + ], + [ + "gene_synonym", + "ilvG" + ], + [ + "gene_synonym", + "ilvO" + ] + ], + "dna_sequence": "ATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGGCGGCTATCGGTTATGCTCGTGCTACCGGCAAAACTGGCGTATGTATCGCCACGTCTGGTCCGGGCGCAACCAACCTGATAACCGGGCTTGCGGACGCACTGTTAGATTCCATCCCTGTTGTTGCCATCACCGGTCAAGTGTCCGCACCGTTTATCGGCACTGACGCATTTCAGGAAGTGGATGTCCTGGGATTGTCGTTAGCCTGTACCAAGCACAGCTTTCTGGTGCAGTCGCTGGAAGAGTTGCCGCGCATCATGGCTGAAGCATTCGACGTTGCCTGCTCAGGTCGTCCTGGTCCGGTTCTGGTCGATATCCCAAAAGATATCCAGTTAGCCAGCGGTGACCTGGAACCGTGGTTCACCACCGTTGAAAACGAAGTGACTTTCCCACATGCCGAAGTTGAGCAAGCGCGCCAGATGCTGGCAAAAGCGCAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTCGCGGTGCAGGAGTGTGACCTGCTGATCGCCGTGGGCGCACGTTTTGATGACCGGGTGACCGGCAAACTGAACACCTTCGCGCCACACGCCAGTGTTATCCATATGGATATCGACCCGGCAGAAATGAACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGAGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGATACCGTTGTCTGTATCTCCGGTGACGGCTCTTTCATGATGAATGTGCAAGAGCTGGGCACCGTAAAACGCAAGCAGTTACCGTTGAAAATCGTCTTACTCGATAACCAACGGTTAGGGATGGTTCGACAATGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATCATGA", + "dna_sequence_length": 1647, + "id": "CDS_3710", + "location": [ + [ + "NC_000913", + 3950560, + "+", + 984 + ], + [ + "NC_000913", + 3951542, + "+", + 663 + ] + ], + "md5": "681cbd30cd41706a782bc0a75984ed2e", + "parent_gene": "", + "protein_md5": "83a52502a4f22bc4a31e0c4bd3d8bf79", + "protein_translation": "MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPALQQPLNQ", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012313" + ], + [ + "gene_synonym", + "ECK3761" + ], + [ + "gene_synonym", + "EcoGene:EG10501" + ], + [ + "gene_synonym", + "GI:16131627" + ], + [ + "gene_synonym", + "GeneID:948279" + ], + [ + "gene_synonym", + "JW3742" + ], + [ + "gene_synonym", + "NP_418217.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADG1" + ], + [ + "gene_synonym", + "b3769" + ], + [ + "gene_synonym", + "ilvM" + ] + ], + "dna_sequence": "ATGATGCAACATCAGGTCAATGTATCGGCTCGCTTCAATCCAGAAACCTTAGAACGTGTTTTACGCGTGGTGCGTCATCGTGGTTTCCACGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGA", + "dna_sequence_length": 264, + "functions": [ + "acetolactate synthase 2 small subunit" + ], + "id": "CDS_3711", + "location": [ + [ + "NC_000913", + 3952201, + "+", + 264 + ] + ], + "md5": "3b9ecde7ed6c08fa8b9156b568e01c66", + "parent_gene": "", + "protein_md5": "a1d7a82621861acf64f75e6389f719d2", + "protein_translation": "MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA", + "protein_translation_length": 87, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012316" + ], + [ + "gene_synonym", + "ECK3762" + ], + [ + "gene_synonym", + "EcoGene:EG10497" + ], + [ + "gene_synonym", + "GI:49176403" + ], + [ + "gene_synonym", + "GeneID:948278" + ], + [ + "gene_synonym", + "JW5606" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB80" + ], + [ + "gene_synonym", + "YP_026247.1" + ], + [ + "gene_synonym", + "b3770" + ], + [ + "gene_synonym", + "ilvE" + ] + ], + "dna_sequence": "ATGACCACGAAGAAAGCTGATTACATTTGGTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCATCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATCGCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGTCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTGGGGAGCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAGCGAAGCGCGCCGCCACGGTTATCAGGAAGGTATCGCGCTGGATGTGAACGGTTATATCTCTGAAGGCGCAGGCGAAAACCTGTTTGAAGTGAAAGATGGTGTGCTGTTCACCCCACCGTTCACCTCCTCCGCGCTGCCGGGTATTACCCGTGATGCCATCATCAAACTGGCGAAAGAGCTGGGAATTGAAGTACGTGAGCAGGTGCTGTCGCGCGAATCCCTGTACCTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGCCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAA", + "dna_sequence_length": 930, + "functions": [ + "branched-chain amino acid aminotransferase" + ], + "id": "CDS_3712", + "location": [ + [ + "NC_000913", + 3952484, + "+", + 930 + ] + ], + "md5": "309a4d1b88c70e3effdfcbce8aedda80", + "parent_gene": "", + "protein_md5": "1d3a670d1bfad1175025fba33bbc4a4c", + "protein_translation": "MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012318" + ], + [ + "gene_synonym", + "ECK3763" + ], + [ + "gene_synonym", + "EcoGene:EG10496" + ], + [ + "gene_synonym", + "GI:49176404" + ], + [ + "gene_synonym", + "GeneID:948277" + ], + [ + "gene_synonym", + "JW5605" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05791" + ], + [ + "gene_synonym", + "YP_026248.1" + ], + [ + "gene_synonym", + "b3771" + ], + [ + "gene_synonym", + "ilvD" + ] + ], + "dna_sequence": "ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTGGCGCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCGATCTCGGTAAACTGGTCGCCGAACAAATTGAAGCGGCTGGCGGCGTTGCCAAAGAGTTCAACACCATTGCGGTGGATGATGGGATTGCCATGGGCCACGGGGGGATGCTTTATTCACTGCCATCTCGCGAACTGATCGCTGATTCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGGCGGCCCGATGGAGGCCGGGAAAACCAAACTTTCCGATCAGATCATCAAGCTCGATCTGGTTGATGCGATGATCCAGGGCGCAGACCCGAAAGTATCTGACTCCCAGAGCGATCAGGTTGAACGTTCCGCGTGTCCGACCTGCGGTTCCTGCTCCGGGATGTTTACCGCTAACTCAATGAACTGCCTGACCGAAGCGCTGGGCCTGTCGCAGCCGGGCAACGGCTCGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCACTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCTGTGTAAAGTTGCGCCGAGCACCCAGAAATACCATATGGAAGATGTTCACCGTGCTGGTGGTGTTATCGGTATTCTCGGCGAACTGGATCGCGCGGGGTTACTGAACCGTGATGTGAAAAACGTACTTGGCCTGACGTTGCCGCAAACGCTGGAACAATACGACGTTATGCTGACCCAGGATGACGCGGTAAAAAATATGTTCCGCGCAGGTCCTGCAGGCATTCGTACCACACAGGCATTCTCGCAAGATTGCCGTTGGGATACGCTGGACGACGATCGCGCCAATGGCTGTATCCGCTCGCTGGAACACGCCTACAGCAAAGACGGCGGCCTGGCGGTGCTCTACGGTAACTTTGCGGAAAACGGCTGCATCGTGAAAACGGCAGGCGTCGATGACAGCATCCTCAAATTCACCGGCCCGGCGAAAGTGTACGAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATCCCGAACCGTGGCATTCAGTTACAGGTAAGCGATGCCGAACTGGCGGCGCGTCGTGAAGCGCAGGACGCTCGAGGTGACAAAGCCTGGACGCCGAAAAATCGTGAACGTCAGGTCTCCTTTGCCCTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAA", + "dna_sequence_length": 1851, + "functions": [ + "dihydroxyacid dehydratase" + ], + "id": "CDS_3713", + "location": [ + [ + "NC_000913", + 3953478, + "+", + 1851 + ] + ], + "md5": "6a64ff8f4c4671507946170b651e1d5c", + "parent_gene": "", + "protein_md5": "84a0a843d8345d29dbe7cf03877f5f44", + "protein_translation": "MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELAARREAQDARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG", + "protein_translation_length": 616, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012321" + ], + [ + "gene_synonym", + "ECK3764" + ], + [ + "gene_synonym", + "EcoGene:EG10493" + ], + [ + "gene_synonym", + "GI:16131630" + ], + [ + "gene_synonym", + "GeneID:948287" + ], + [ + "gene_synonym", + "JW3745" + ], + [ + "gene_synonym", + "NP_418220.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04968" + ], + [ + "gene_synonym", + "b3772" + ], + [ + "gene_synonym", + "ilvA" + ] + ], + "dna_sequence": "ATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCTGCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCGGCGGCGGTCTGGCTGCTGGCGTGGCGGTGCTGATCAAACAACTGATGCCGCAAATCAAAGTGATCGCCGTAGAAGCGGAAGACTCCGCCTGCCTGAAAGCAGCGCTGGATGCGGGTCATCCGGTTGATCTGCCGCGCGTAGGGCTATTTGCTGAAGGCGTAGCGGTAAAACGCATCGGTGACGAAACCTTCCGTTTATGCCAGGAGTATCTCGACGACATCATCACCGTCGATAGCGATGCGATCTGTGCGGCGATGAAGGATTTATTCGAAGATGTGCGCGCGGTGGCGGAACCCTCTGGCGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCAGCTTCCTCAAATTCTGCCAACTGCTTGGCGGGCGTTCGGTCACCGAGTTCAACTACCGTTTTGCCGATGCCAAAAACGCCTGCATCTTTGTCGGTGTGCGCCTGAGCCGCGGCCTCGAAGAGCGCAAAGAAATTTTGCAGATGCTCAACGACGGCGGCTACAGCGTGGTTGATCTCTCCGACGACGAAATGGCGAAGCTACACGTGCGCTATATGGTCGGCGGACGTCCATCGCATCCGTTGCAGGAACGCCTCTACAGCTTCGAATTCCCGGAATCACCGGGCGCGCTGCTGCGCTTCCTCAACACGCTGGGTACGTACTGGAACATTTCTTTGTTCCACTATCGCAGCCATGGCACCGACTACGGGCGCGTACTGGCGGCGTTCGAACTTGGCGACCATGAACCGGATTTCGAAACCCGGCTGAATGAGCTGGGCTACGATTGCCACGACGAAACCAATAACCCGGCGTTCAGGTTCTTTTTGGCGGGTTAG", + "dna_sequence_length": 1545, + "functions": [ + "l-threonine dehydratase, biosynthetic", + "also known as threonine deaminase" + ], + "id": "CDS_3714", + "location": [ + [ + "NC_000913", + 3955331, + "+", + 1545 + ] + ], + "md5": "4a51eb5cf857012d3167066004aa3f53", + "parent_gene": "", + "protein_md5": "4dc325fe6b3788855c5faaf3514c2344", + "protein_translation": "MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYIALHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAFRFFLAG", + "protein_translation_length": 514, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012323" + ], + [ + "gene_synonym", + "ECK3765" + ], + [ + "gene_synonym", + "EcoGene:EG10503" + ], + [ + "gene_synonym", + "GI:16131631" + ], + [ + "gene_synonym", + "GeneID:948284" + ], + [ + "gene_synonym", + "JW3746" + ], + [ + "gene_synonym", + "NP_418221.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05827" + ], + [ + "gene_synonym", + "b3773" + ], + [ + "gene_synonym", + "ilvY" + ] + ], + "dna_sequence": "GTGGATTTACGCGATCTGAAAACCTTCCTGCATCTGGCGGAAAGCCGCCATTTTGGCCGCAGCGCGCGGGCGATGCACGTTAGCCCATCCACGCTCTCACGGCAGATTCAGCGCCTGGAAGAAGATCTCGGTCAGCCGCTGTTTGTGCGCGATAACCGCACGGTGACGCTGACTGAAGCGGGCGAAGAGCTGCGCGTTTTCGCCCAGCAAACGCTGTTGCAGTATCAGCAGTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTCGGTGACCGCTGCCTACAGCCATCTGCCGCCGATTCTGGATCGCTTCCGCGCGGAACACCCGTCGGTGGAGATTAAACTTACTACTGGTGATGCGGCAGATGCGATGGAAAAGGTGGTCACTGGTGAAGCGGATCTGGCGATTGCGGGTAAACCGGAAACCTTGCCCGGCGCAGTGGCGTTTTCGATGCTGGAGAATCTGGCAGTAGTGCTGATTGCCCCCGCGCTGCCCTGCCCGGTGCGTAATCAGGTGTCGGTAGAGAAGCCGGACTGGTCAACGGTGCCGTTTATTATGGCCGATCAGGGGCCGGTACGCCGCCGCATTGAACTGTGGTTTCGACGCAATAAAATCAGTAACCCGATGATTTACGCCACGGTTGGCGGGCATGAAGCGATGGTATCGATGGTGGCACTCGGCTGTGGCGTGGCATTGTTGCCGGAAGTGGTGCTGGAAAACAGCCCCGAACCGGTGCGTAACCGCGTGATGATTTTAGAGCGCAGCGATGAGAAAACGCCGTTTGAGCTGGGCGTGTGTGCGCAGAAAAAGCGGCTACATGAGCCGCTAATTGAGGCATTCTGGAAGATTTTGCCGAACCACAAATGA", + "dna_sequence_length": 894, + "functions": [ + "transcriptional activator of ilvC", + "autorepressor" + ], + "id": "CDS_3715", + "location": [ + [ + "NC_000913", + 3957820, + "-", + 894 + ] + ], + "md5": "94cf9f51f721ecd98edd368b061d87f8", + "parent_gene": "", + "protein_md5": "06ca4eea8ba87c5d3718a5b9e34adfe7", + "protein_translation": "MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNHK", + "protein_translation_length": 297, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012331" + ], + [ + "gene_synonym", + "ECK3766" + ], + [ + "gene_synonym", + "EcoGene:EG10495" + ], + [ + "gene_synonym", + "GI:16131632" + ], + [ + "gene_synonym", + "GeneID:948286" + ], + [ + "gene_synonym", + "JW3747" + ], + [ + "gene_synonym", + "NP_418222.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05793" + ], + [ + "gene_synonym", + "b3774" + ], + [ + "gene_synonym", + "ilvC" + ] + ], + "dna_sequence": "ATGGCTAACTACTTCAATACACTGAATCTGCGCCAGCAGCTGGCACAGCTGGGCAAATGTCGCTTTATGGGCCGCGATGAATTCGCCGATGGCGCGAGCTACCTTCAGGGTAAAAAAGTAGTCATCGTCGGCTGTGGCGCACAGGGTCTGAACCAGGGCCTGAACATGCGTGATTCTGGTCTCGATATCTCCTACGCTCTGCGTAAAGAAGCGATTGCCGAGAAGCGCGCGTCCTGGCGTAAAGCGACCGAAAATGGTTTTAAAGTGGGTACTTACGAAGAACTGATCCCACAGGCGGATCTGGTGATTAACCTGACGCCGGACAAGCAGCACTCTGATGTAGTGCGCACCGTACAGCCACTGATGAAAGACGGCGCGGCGCTGGGCTACTCGCACGGTTTCAACATCGTCGAAGTGGGCGAGCAGATCCGTAAAGATATCACCGTAGTGATGGTTGCGCCGAAATGCCCAGGCACCGAAGTGCGTGAAGAGTACAAACGTGGGTTCGGCGTACCGACGCTGATTGCCGTTCACCCGGAAAACGATCCGAAAGGCGAAGGCATGGCGATTGCCAAAGCCTGGGCGGCTGCAACCGGTGGTCACCGTGCGGGTGTGCTGGAATCGTCCTTCGTTGCGGAAGTGAAATCTGACCTGATGGGCGAGCAAACCATCCTGTGCGGTATGTTGCAGGCTGGCTCTCTGCTGTGCTTCGACAAGCTGGTGGAAGAAGGTACCGATCCAGCATACGCAGAAAAACTGATTCAGTTCGGTTGGGAAACCATCACCGAAGCACTGAAACAGGGCGGCATCACCCTGATGATGGACCGTCTCTCTAACCCGGCGAAACTGCGTGCTTATGCGCTTTCTGAACAGCTGAAAGAGATCATGGCACCCCTGTTCCAGAAACATATGGACGACATCATCTCCGGCGAATTCTCTTCCGGTATGATGGCGGACTGGGCCAACGATGATAAGAAACTGCTGACCTGGCGTGAAGAGACCGGCAAAACCGCGTTTGAAACCGCGCCGCAGTATGAAGGCAAAATCGGCGAGCAGGAGTACTTCGATAAAGGCGTACTGATGATTGCGATGGTGAAAGCGGGCGTTGAACTGGCGTTCGAAACCATGGTCGATTCCGGCATCATTGAAGAGTCTGCATATTATGAATCACTGCACGAGCTGCCGCTGATTGCCAACACCATCGCCCGTAAGCGTCTGTACGAAATGAACGTGGTTATCTCTGATACCGCTGAGTACGGTAACTATCTGTTCTCTTACGCTTGTGTGCCGTTGCTGAAACCGTTTATGGCAGAGCTGCAACCGGGCGACCTGGGTAAAGCTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAA", + "dna_sequence_length": 1476, + "functions": [ + "ketol-acid reductoisomerase, NAD(P)-binding" + ], + "id": "CDS_3716", + "location": [ + [ + "NC_000913", + 3957970, + "+", + 1476 + ] + ], + "md5": "0b7feaded0ceb0ee1dc0afff4de16a5e", + "parent_gene": "", + "protein_md5": "c9a3ff3d57da59c58e00846dfb3dcc5c", + "protein_translation": "MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNGQLRDVNEAIRSHAIEQVGKKLRGYMTDMKRIAVAG", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012334" + ], + [ + "gene_synonym", + "ECK3767" + ], + [ + "gene_synonym", + "EcoGene:EG12352" + ], + [ + "gene_synonym", + "GI:16131633" + ], + [ + "gene_synonym", + "GeneID:948285" + ], + [ + "gene_synonym", + "JW3748" + ], + [ + "gene_synonym", + "NP_418223.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9L5" + ], + [ + "gene_synonym", + "b3775" + ], + [ + "gene_synonym", + "parvA" + ], + [ + "gene_synonym", + "ppiC" + ] + ], + "dna_sequence": "ATGGCAAAAACAGCAGCAGCACTGCATATCCTTGTAAAAGAAGAGAAACTGGCTCTGGATCTTCTCGAGCAGATTAAGAACGGGGCCGATTTCGGCAAGCTGGCGAAGAAACACTCCATTTGCCCATCAGGCAAACGCGGCGGTGATTTAGGTGAATTCCGCCAGGGTCAGATGGTTCCGGCGTTCGATAAAGTGGTTTTCTCTTGTCCGGTACTGGAGCCGACCGGCCCGCTGCACACCCAGTTCGGATATCACATCATTAAGGTGCTGTACCGCAACTAA", + "dna_sequence_length": 282, + "functions": [ + "peptidyl-prolyl cis-trans isomerase C (rotamase C)" + ], + "id": "CDS_3717", + "location": [ + [ + "NC_000913", + 3959813, + "-", + 282 + ] + ], + "md5": "a9bf5b45cb9c2117959fb1494fbf337f", + "parent_gene": "", + "protein_md5": "f9de714674d1b64ac6831b260f357baa", + "protein_translation": "MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012338" + ], + [ + "gene_synonym", + "ASAP:ABE-0012340" + ], + [ + "gene_synonym", + "ECK3768" + ], + [ + "gene_synonym", + "EcoGene:EG14339" + ], + [ + "gene_synonym", + "GeneID:2847676" + ], + [ + "gene_synonym", + "JW3749" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56259" + ], + [ + "gene_synonym", + "b3777" + ], + [ + "gene_synonym", + "yifN" + ], + [ + "gene_synonym", + "yifO" + ] + ], + "dna_sequence": "GTGGCGATTAATTTCAGCCCTAAGGTTGGTGAAATACTGGAATGCAACTTTGGTAACTATCCTGTTAGCCAAAATGGACCGTTCAGCACGACGTATTACGATGGCCGCATTCCTCCTGAAATGATAAAAAACAGGTTAGTTGTCGTGCTCAACGGAAAAATTAATGGCAACGCATGCATCGTCGTTCCATTATCAACCACTCGCGACCCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGTTATCAATGACCTGCAATTCTTTGATCAGCAGATTCGTTGGGCCAAAGCCGACCTGGTACAACAAGTCAGTCGAAACAGATTAAACAGAGCAAGGACTTACAGAGGGTATCTTAATCAATGTTTGCCACATGAGTTGGTTGCAGACATACAGAGGGCGGTCATCAAGTCAATCAATGCCATATCGCTCATAAATTGA", + "dna_sequence_length": 450, + "id": "CDS_3718", + "location": [ + [ + "NC_000913", + 3960460, + "-", + 207 + ], + [ + "NC_000913", + 3960254, + "-", + 243 + ] + ], + "md5": "a80fdd62e350772f92ca485affadf209", + "parent_gene": "", + "protein_md5": "65918b95b9cb1060104578ceb6f12550", + "protein_translation": "VAINFSPKVGEILECNFGNYPVSQNGPFSTTYYDGRIPPEMIKNRLVVVLNGKINGNACIVVPLSTTRDPDKLKRGMHVEIASNVINDLQFFDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012344" + ], + [ + "gene_synonym", + "ECK3770" + ], + [ + "gene_synonym", + "EcoGene:EG10837" + ], + [ + "gene_synonym", + "GI:49176407" + ], + [ + "gene_synonym", + "GeneID:948292" + ], + [ + "gene_synonym", + "JW5604" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09980" + ], + [ + "gene_synonym", + "YP_026251.1" + ], + [ + "gene_synonym", + "b3778" + ], + [ + "gene_synonym", + "dasC" + ], + [ + "gene_synonym", + "mbrA" + ], + [ + "gene_synonym", + "mmrA?" + ], + [ + "gene_synonym", + "rep" + ] + ], + "dna_sequence": "ATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGTTGCGGTTATCAGGCGCGGCACATTGCGGCGGTGACCTTTACTAATAAAGCAGCGCGCGAGATGAAAGAGCGTGTAGGGCAGACGCTGGGGCGCAAAGAGGCGCGTGGGCTGATGATCTCCACTTTCCATACGTTGGGGCTGGATATCATCAAACGCGAGTATGCGGCGCTTGGGATGAAAGCGAACTTCTCGTTGTTTGACGATACCGATCAGCTTGCTTTGCTTAAAGAGTTGACCGAGGGGCTGATTGAAGATGACAAAGTTCTCCTGCAACAACTGATTTCGACCATCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGTGAAACTGCTGGTGGGCAGCCGCGCGCGCTTTACCGTGGTGGGTGACGATGACCAGTCGATCTACTCCTGGCGCGGTGCACGTCCGCAAAACCTGGTGCTGCTGAGTCAGGATTTTCCGGCGCTGAAGGTGATTAAGCTTGAGCAGAACTATCGCTCTTCCGGGCGTATTCTGAAAGCGGCGAACATCCTGATCGCCAATAACCCGCACGTCTTTGAAAAGCGTCTGTTCTCCGAACTGGGTTATGGCGCGGAGCTAAAAGTATTAAGCGCGAATAACGAAGAACATGAGGCTGAGCGCGTTACTGGCGAGCTGATCGCCCATCACTTCGTCAATAAAACGCAGTACAAAGATTACGCCATTCTTTATCGCGGTAACCATCAGTCGCGGGTGTTTGAAAAATTCCTGATGCAAAACCGCATCCCGTACAAAATATCTGGTGGTACGTCGTTTTTCTCTCGTCCTGAAATCAAGGACTTGCTGGCTTATCTGCGCGTGCTGACTAACCCGGACGATGACAGCGCATTTCTGCGTATCGTTAACACGCCGAAGCGAGAGATTGGCCCGGCTACGCTGAAAAAGCTGGGTGAGTGGGCGATGACGCGCAATAAAAGCATGTTTACCGCCAGCTTTGATATGGGCCTGAGTCAGACGCTTAGCGGACGTGGTTATGAAGCATTGACCCGCTTCACTCACTGGTTGGCAGAAATCCAGCGTCTGGCGGAGCGGGAGCCGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCTGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCACGCGTCGAAAGGGCTGGAGTTTCCTTATGTCTACATGGTCGGTATGGAAGAAGGGTTTTTGCCGCACCAGAGCAGCATCGATGAAGATAATATCGATGAGGAGCGGCGGCTGGCCTATGTCGGCATTACCCGCGCCCAGAAGGAATTGACCTTTACGCTGTGTAAAGAACGCCGTCAGTACGGCGAACTGGTGCGCCCGGAGCCGAGCCGCTTTTTGCTGGAGCTGCCGCAGGATGATCTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAA", + "dna_sequence_length": 2022, + "functions": [ + "DNA helicase and single-stranded DNA-dependent ATPase" + ], + "id": "CDS_3719", + "location": [ + [ + "NC_000913", + 3960677, + "+", + 2022 + ] + ], + "md5": "67805296875cd59476705d009ae78593", + "parent_gene": "", + "protein_md5": "d2145fa047ad8790ce7e449216c33243", + "protein_translation": "MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK", + "protein_translation_length": 673, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012347" + ], + [ + "gene_synonym", + "ECK3771" + ], + [ + "gene_synonym", + "EcoGene:EG10413" + ], + [ + "gene_synonym", + "GI:49176408" + ], + [ + "gene_synonym", + "GeneID:948291" + ], + [ + "gene_synonym", + "JW5603" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25552" + ], + [ + "gene_synonym", + "YP_026252.1" + ], + [ + "gene_synonym", + "b3779" + ], + [ + "gene_synonym", + "gpp" + ], + [ + "gene_synonym", + "gppA" + ] + ], + "dna_sequence": "ATGGGTTCCACCTCGTCGCTGTATGCAGCCATTGATCTCGGTTCGAATAGTTTTCATATGCTGGTTGTGCGCGAGGTGGCTGGAAGCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCAATGAAGCAATGGAGCGCGGTTGGCAATGTTTGCGCCTGTTTGCTGAACGTCTGCAAGATATTCCTCCCTCGCAAATTCGCGTTGTCGCTACGGCGACGTTACGCCTTGCCGTCAATGCGGGTGATTTTATTGCCAAAGCGCAGGAAATTCTCGGTTGTCCGGTACAGGTGATCAGCGGTGAAGAGGAAGCACGTCTGATTTATCAGGGCGTTGCTCACACCACTGGTGGTGCCGATCAGCGCCTGGTGGTGGATATAGGCGGAGCCAGTACTGAACTGGTAACCGGCACGGGTGCACAAACCACCTCGTTGTTCAGCCTGTCGATGGGCTGCGTCACCTGGCTGGAACGCTATTTTGCCGATCGTAATCTGGGGCAGGAAAATTTTGATGCTGCAGAAAAAGCGGCACGCGAAGTGTTACGTCCGGTTGCCGATGAATTACGGTATCACGGCTGGAAAGTGTGCGTTGGTGCTTCCGGCACCGTGCAGGCGTTACAGGAAATCATGATGGCACAGGGGATGGATGAACGCATTACCCTGGAAAAGTTGCAGCAATTGAAACAGCGAGCCATTCATTGCGGTCGGCTGGAGGAACTGGAGATTGACGGGCTGACGCTGGAACGTGCGTTAGTGTTCCCGAGTGGTCTGGCGATCCTGATCGCCATTTTTACCGAACTGAATATTCAGTGTATGACCCTGGCGGGCGGTGCGCTGCGTGAAGGCCTGGTCTACGGCATGTTGCATCTGGCCGTCGAGCAGGATATTCGCAGCCGTACGCTGCGTAATATTCAACGCCGCTTTATGATCGATATTGATCAGGCACAGCGCGTAGCCAAAGTTGCGGCTAACTTCTTCGATCAGGTGGAAAACGAATGGCATCTTGAAGCAATAAGCCGCGATTTGCTCATCAGCGCCTGTCAGCTTCATGAAATCGGCCTGAGCGTTGACTTCAAACAAGCGCCGCAACACGCTGCTTATCTGGTGCGTAATCTGGATCTTCCCGGTTTTACCCCCGCACAGAAAAAATTGCTGGCGACGCTACTGCTCAACCAGACTAATCCGGTCGATCTCTCATCGCTGCATCAGCAAAATGCCGTACCGCCGCGCGTCGCAGAACAACTCTGCCGTTTACTACGCCTGGCCATCATTTTTGCCAGCCGTCGCCGTGACGATCTCGTGCCAGAGATGACATTACAGGCTAACCATGAACTGTTGACCTTGACGCTTCCGCAAGGTTGGCTAACCCAACATCCGCTGGGTAAAGAGATTATTGCTCAGGAAAGCCAGTGGCAGAGCTATGTCCACTGGCCGCTGGAAGTGCATTAA", + "dna_sequence_length": 1485, + "functions": [ + "guanosine pentaphosphatase/exopolyphosphatase" + ], + "id": "CDS_3720", + "location": [ + [ + "NC_000913", + 3964229, + "-", + 1485 + ] + ], + "md5": "3179c050b889f73aeb1045cd8ef436a2", + "parent_gene": "", + "protein_md5": "ec29ac4929f10d101f91830133eba8f7", + "protein_translation": "MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVAANFFDQVENEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH", + "protein_translation_length": 494, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012351" + ], + [ + "gene_synonym", + "ECK3772" + ], + [ + "gene_synonym", + "EcoGene:EG10844" + ], + [ + "gene_synonym", + "GI:16131636" + ], + [ + "gene_synonym", + "GeneID:948290" + ], + [ + "gene_synonym", + "JW3753" + ], + [ + "gene_synonym", + "NP_418227.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8J8" + ], + [ + "gene_synonym", + "b3780" + ], + [ + "gene_synonym", + "mmrA?" + ], + [ + "gene_synonym", + "rhlB" + ] + ], + "dna_sequence": "ATGAGCAAAACACATTTAACAGAACAGAAGTTTTCCGACTTCGCCCTGCATCCGAAGGTTGTAGAAGCCCTTGAAAAAAAAGGGTTTCATAACTGTACGCCCATTCAGGCACTGGCCCTTCCGCTGACGCTGGCGGGTCGTGACGTAGCCGGGCAGGCGCAAACCGGTACCGGGAAAACGATGGCGTTTCTTACGTCAACGTTTCATTATCTTCTCTCTCATCCTGCGATTGCCGATCGCAAGGTGAATCAGCCGCGTGCCTTAATTATGGCACCGACGCGTGAACTTGCCGTGCAGATCCATGCCGACGCAGAACCGCTGGCGGAAGCTACTGGCCTGAAGCTGGGTCTGGCTTACGGTGGTGATGGCTACGACAAACAGCTGAAAGTGCTGGAAAGCGGCGTTGACATTCTGATTGGCACCACGGGGCGTTTAATTGACTACGCCAAGCAGAACCACATTAACCTCGGTGCCATTCAGGTGGTGGTACTGGACGAAGCCGATCGCATGTACGATCTGGGCTTTATTAAAGATATCCGCTGGCTGTTCCGCCGTATGCCGCCTGCAAACCAGCGCCTCAACATGCTGTTCTCCGCCACGCTTTCGTACCGGGTACGTGAACTGGCGTTCGAGCAGATGAACAATGCCGAATATATTGAAGTGGAACCGGAACAGAAAACGGGCCACCGTATTAAAGAAGAGCTTTTCTACCCTTCTAACGAAGAAAAAATGCGTTTGCTGCAAACGCTGATCGAAGAAGAGTGGCCAGACAGAGCGATTATTTTCGCCAACACCAAACACCGTTGTGAAGAGATCTGGGGCCACCTGGCAGCAGATGGTCATCGTGTCGGTTTATTGACAGGCGATGTCGCGCAGAAAAAACGTCTGCGTATTCTTGATGAATTTACCCGTGGCGATCTGGATATTCTGGTTGCCACCGACGTTGCCGCGCGTGGTTTGCATATTCCGGCAGTGACGCACGTCTTTAACTACGATTTACCCGATGACTGTGAAGATTACGTTCACCGTATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGAAGAGTATGCATTGAATTTGCCTGCTATTGAGACCTATATTGGTCACTCAATTCCGGTAAGCAAATACAATCCGGACGCATTGATGACCGATCTGCCAAAACCGCTGCGCCTCACGCGCCCGCGCACAGGCAATGGTCCGCGTCGTACTGGCGCTCCGCGTAATCGTCGTCGTTCAGGTTAA", + "dna_sequence_length": 1266, + "functions": [ + "ATP-dependent RNA helicase" + ], + "id": "CDS_3721", + "location": [ + [ + "NC_000913", + 3965630, + "-", + 1266 + ] + ], + "md5": "b90e8dfb70a592cfe5d43a15828bfc98", + "parent_gene": "", + "protein_md5": "9e62102c3fed86ead29103fc484a13af", + "protein_translation": "MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012357" + ], + [ + "gene_synonym", + "ECK3773" + ], + [ + "gene_synonym", + "EcoGene:EG11031" + ], + [ + "gene_synonym", + "GI:67005950" + ], + [ + "gene_synonym", + "GeneID:948289" + ], + [ + "gene_synonym", + "JW5856" + ], + [ + "gene_synonym", + "NP_418228.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA25" + ], + [ + "gene_synonym", + "b3781" + ], + [ + "gene_synonym", + "dasC" + ], + [ + "gene_synonym", + "fip" + ], + [ + "gene_synonym", + "fipA" + ], + [ + "gene_synonym", + "trxA" + ], + [ + "gene_synonym", + "tsnC" + ] + ], + "dna_sequence": "ATGAGCGATAAAATTATTCACCTGACTGACGACAGTTTTGACACGGATGTACTCAAAGCGGACGGGGCGATCCTCGTCGATTTCTGGGCAGAGTGGTGCGGTCCGTGCAAAATGATCGCCCCGATTCTGGATGAAATCGCTGACGAATATCAGGGCAAACTGACCGTTGCAAAACTGAACATCGATCAAAACCCTGGCACTGCGCCGAAATATGGCATCCGTGGTATCCCGACTCTGCTGCTGTTCAAAAACGGTGAAGTGGCGGCAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAA", + "dna_sequence_length": 330, + "functions": [ + "thioredoxin 1" + ], + "id": "CDS_3722", + "location": [ + [ + "NC_000913", + 3965761, + "+", + 330 + ] + ], + "md5": "a7a8587848df43a538e10224d95f3da6", + "parent_gene": "", + "protein_md5": "850143d49315e8891aad60bd107000ef", + "protein_translation": "MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012362" + ], + [ + "gene_synonym", + "ECK3775" + ], + [ + "gene_synonym", + "EcoGene:EG10845" + ], + [ + "gene_synonym", + "GI:16131639" + ], + [ + "gene_synonym", + "GeneID:948297" + ], + [ + "gene_synonym", + "JW3756" + ], + [ + "gene_synonym", + "NP_418230.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG30" + ], + [ + "gene_synonym", + "b3783" + ], + [ + "gene_synonym", + "hdf" + ], + [ + "gene_synonym", + "nitA" + ], + [ + "gene_synonym", + "nusD" + ], + [ + "gene_synonym", + "psuA" + ], + [ + "gene_synonym", + "rho" + ], + [ + "gene_synonym", + "rnsC" + ], + [ + "gene_synonym", + "sbaA" + ], + [ + "gene_synonym", + "sun" + ], + [ + "gene_synonym", + "tabC" + ], + [ + "gene_synonym", + "tsu" + ] + ], + "dna_sequence": "ATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCCGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGTGCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTCGCCACGTTCAGGTTGCGGAAATGGTGATCGAGAAGGCCAAACGCCTGGTTGAGCACAAGAAAGACGTTATCATTCTGCTCGACTCCATCACTCGTCTGGCGCGCGCTTACAACACCGTTGTTCCGGCGTCAGGTAAAGTGTTGACCGGTGGTGTGGATGCCAACGCCCTGCATCGTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACCTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA", + "dna_sequence_length": 1260, + "functions": [ + "transcription termination factor" + ], + "id": "CDS_3723", + "location": [ + [ + "NC_000913", + 3966417, + "+", + 1260 + ] + ], + "md5": "3c51ec2383d1feff8fda748972571467", + "parent_gene": "", + "protein_md5": "e130092e41361244e8362f098cdd0a85", + "protein_translation": "MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012366" + ], + [ + "gene_synonym", + "ECK3776" + ], + [ + "gene_synonym", + "EcoGene:EG10840" + ], + [ + "gene_synonym", + "GI:16131640" + ], + [ + "gene_synonym", + "GeneID:948789" + ], + [ + "gene_synonym", + "JW3758" + ], + [ + "gene_synonym", + "NP_418231.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC78" + ], + [ + "gene_synonym", + "b3784" + ], + [ + "gene_synonym", + "rfe" + ], + [ + "gene_synonym", + "wecA" + ] + ], + "dna_sequence": "GTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCATCTCTCTATCTCGCTTGTGCCGGTGTGCTTGTTTTCATTGGCGCGCTGGATGACCGTTTTGATATCAGCGTAAAAATCCGTGCCACCATACAGGCCGCTGTTGGCATTGTTATGATGGTGTTCGGCAAGCTTTATCTCAGTAGCCTGGGTTATATCTTTGGCTCCTGGGAGATGGTGCTCGGACCGTTTGGTTACTTCCTGACGCTATTTGCCGTCTGGGCGGCCATTAATGCGTTCAACATGGTTGATGGCATTGATGGCTTGCTGGGCGGGTTGTCCTGCGTCTCGTTTGCAGCAATCGGTATGATTTTGTGGTTCGACGGGCAAACCAGCCTCGCAATCTGGTGCTTTGCGATGATCGCCGCCATCCTGCCATACATCATGCTTAACCTTGGTATCCTGGGTCGCCGCTACAAAGTCTTTATGGGTGATGCGGGCAGTACGCTGATTGGTTTTACCGTTATCTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTCACCATTTGATCATGCGTGCCGGGTTTACTTCCCGTCAGGCGTTTGTGCTGATTACCCTTGCCGCAGCACTGCTCGCTTCCATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAA", + "dna_sequence_length": 1104, + "functions": [ + "UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase" + ], + "id": "CDS_3724", + "location": [ + [ + "NC_000913", + 3967916, + "+", + 1104 + ] + ], + "md5": "84988a4fb8fc76c9d49679aaee1eb092", + "parent_gene": "", + "protein_md5": "e1e642cbdc86703a50e4621a3665c6b8", + "protein_translation": "MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQGLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRATIQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDGLLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDAGSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLYGYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012370" + ], + [ + "gene_synonym", + "ECK3777" + ], + [ + "gene_synonym", + "EcoGene:EG11295" + ], + [ + "gene_synonym", + "GI:90111649" + ], + [ + "gene_synonym", + "GeneID:944815" + ], + [ + "gene_synonym", + "JW5601" + ], + [ + "gene_synonym", + "NP_418232.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG00" + ], + [ + "gene_synonym", + "b3785" + ], + [ + "gene_synonym", + "metNSt" + ], + [ + "gene_synonym", + "wzz" + ], + [ + "gene_synonym", + "wzzE" + ], + [ + "gene_synonym", + "yifC" + ] + ], + "dna_sequence": "ATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTGGGCTGGGAAGCTATGGATTATTGGCATGGGGCTGGCGTTTGCGTTAATCGCGCTGGCGTATACGTTTTTTGCTCGTCAGGAGTGGAGCTCGACGGCGATTACCGATCGTCCAACGGTGAATATGCTGGGGGGATATTACTCGCAGCAGCAATTTTTGCGTAACCTGGATGTCCGTTCAAACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGGAATTACCTGATTCAGAAATGTTCCTGCTTGGGCGTCCAATGCTTCAGGCTCGACTGGAAAATTTACAGGCCGTCGGTCCGGCCTTTGATCTCGACTATGATCAGAATCGGGCCATGTTAAACACCCTGAATGTTGGTCCAACCCTGGATCCGCGTTTTCAGACCTATCGCTATTTGCGTACGCCGGAAGAACCGGTAAAACGCGATAGCCCACGTCGTGCCTTCCTGATGATTATGTGGGGCATTGTCGGGGGGCTGATCGGGGCTGGTGTCGCATTAACCCGCCGTTGCTCGAAATAG", + "dna_sequence_length": 1047, + "functions": [ + "Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein" + ], + "id": "CDS_3725", + "location": [ + [ + "NC_000913", + 3969031, + "+", + 1047 + ] + ], + "md5": "9de8f0357000de402063116c0b48b397", + "parent_gene": "", + "protein_md5": "fa6e681ea7fdb390b74a925ea49bceb0", + "protein_translation": "MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012372" + ], + [ + "gene_synonym", + "ECK3778" + ], + [ + "gene_synonym", + "EcoGene:EG11451" + ], + [ + "gene_synonym", + "GI:49176409" + ], + [ + "gene_synonym", + "GeneID:944789" + ], + [ + "gene_synonym", + "JW5600" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27828" + ], + [ + "gene_synonym", + "YP_026253.1" + ], + [ + "gene_synonym", + "b3786" + ], + [ + "gene_synonym", + "nfrC" + ], + [ + "gene_synonym", + "rffE" + ], + [ + "gene_synonym", + "wecB" + ], + [ + "gene_synonym", + "yifF" + ] + ], + "dna_sequence": "GTGAAAGTACTGACTGTATTTGGTACGCGCCCGGAAGCCATCAAGATGGCGCCGTTGGTGCATGCGTTGGCAAAAGATCCTTTTTTTGAGGCTAAAGTTTGCGTCACTGCGCAGCATCGGGAGATGCTCGATCAGGTGCTGAAACTCTTTTCCATTGTACCTGACTACGATCTCAACATAATGCAGCCAGGACAGGGCCTGACAGAGATAACCTGTCGGATTCTGGAAGGGCTAAAACCTATTCTTGCCGAGTTCAAACCAGACGTCGTGCTGGTTCACGGCGATACGACGACGACGCTGGCAACCAGCCTGGCGGCGTTTTATCAGCGTATTCCTGTTGGTCACGTTGAGGCTGGTCTGCGCACGGGCGATCTCTATTCGCCGTGGCCGGAAGAGGCTAACCGTACATTGACCGGGCATCTGGCGATGTATCACTTCTCTCCAACCGAAACTTCCCGGCAAAACTTGCTGCGTGAAAACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGCTGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTGGTGATGCGCGATACCACTGAGCGTCCGGAAGCGGTGACGGCGGGTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGA", + "dna_sequence_length": 1131, + "functions": [ + "UDP-N-acetyl glucosamine-2-epimerase" + ], + "id": "CDS_3726", + "location": [ + [ + "NC_000913", + 3970133, + "+", + 1131 + ] + ], + "md5": "05bd1f939ee0c293bbd16ddcf0a44e3f", + "parent_gene": "", + "protein_md5": "48c9b83f395d9966d8e4571fff544729", + "protein_translation": "MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL", + "protein_translation_length": 376, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012374" + ], + [ + "gene_synonym", + "ECK3779" + ], + [ + "gene_synonym", + "EcoGene:EG11452" + ], + [ + "gene_synonym", + "GI:49176410" + ], + [ + "gene_synonym", + "GeneID:948977" + ], + [ + "gene_synonym", + "JW5599" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27829" + ], + [ + "gene_synonym", + "YP_026254.1" + ], + [ + "gene_synonym", + "b3787" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffD" + ], + [ + "gene_synonym", + "wecC" + ] + ], + "dna_sequence": "ATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCATATCGTCGAACCTGATTTGGCGAGTGTAGTAAAAACTGCCGTAGAAGGCGGTTTTTTACGAGCGAGCACGACGCCAGTTGAAGCGGATGCCTGGCTGATTGCTGTACCCACGCCGTTTAAGGGCGATCATGAGCCAGATATGACCTACGTTGAATCGGCTGCTCGCTCCATTGCGCCAGTGCTGAAAAAAGGCGCGCTGGTGATCCTTGAATCCACCTCGCCGGTGGGGTCAACCGAGAAGATGGCAGAATGGTTAGCAGAGATGCGTCCGGATCTCACTTTCCCGCAGCAGGTGGGCGAGCAGGCGGACGTCAACATTGCTTACTGCCCGGAACGCGTGTTACCAGGACAGGTAATGGTCGAGCTGATTAAAAACGATCGCGTGATTGGTGGTATGACGCCGGTTTGTTCGGCCCGCGCCAGCGAACTGTACAAAATTTTCCTCGAAGGTGAGTGTGTCGTCACTAACTCGCGGACGGCGGAAATGTGTAAGCTCACCGAAAACAGCTTCCGCGATGTGAATATCGCTTTTGCTAATGAATTGTCGCTGATTTGTGCCGATCAGGGGATTAACGTCTGGGAACTGATTCGCCTGGCGAATCGTCACCCTCGCGTTAATATTCTTCAGCCTGGCCCTGGCGTGGGCGGTCACTGCATTGCTGTTGATCCGTGGTTTATCGTGGCACAGAACCCCCAGCAGGCGCGGCTTATCCGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGTGCTGGTGATGCTGGTCGATCATAGTCAGTTCAAAGTTATCAATGGCGACAATGTCCATCAGCAGTATGTCGTCGATGCCAAAGGAGTCTGGCGCTGA", + "dna_sequence_length": 1263, + "functions": [ + "UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase" + ], + "id": "CDS_3727", + "location": [ + [ + "NC_000913", + 3971260, + "+", + 1263 + ] + ], + "md5": "0dd10e5610e7cf5a01d2b88a9ea575a6", + "parent_gene": "", + "protein_md5": "b537b28dee348e1b4fa837926fcf6501", + "protein_translation": "MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGMTPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR", + "protein_translation_length": 420, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012376" + ], + [ + "gene_synonym", + "ECK3780" + ], + [ + "gene_synonym", + "EcoGene:EG11453" + ], + [ + "gene_synonym", + "GI:49176411" + ], + [ + "gene_synonym", + "GeneID:948300" + ], + [ + "gene_synonym", + "JW5598" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27830" + ], + [ + "gene_synonym", + "YP_026255.1" + ], + [ + "gene_synonym", + "b3788" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffG" + ] + ], + "dna_sequence": "ATGAGAAAAATTCTGATAACAGGTGGTGCCGGGTTTATTGGCTCGGCGCTGGTGCGTTATATCATCAACGAAACGAGCGACGCGGTGGTAGTGGTCGATAAGCTGACCTACGCCGGAAACCTGATGTCGCTGGCACCGGTCGCGCAAAGCGAGCGCTTTGCCTTTGAGAAAGTTGATATCTGCGATCGGGCAGAACTGGCACGCGTATTCACTGAGCATCAGCCAGACTGTGTCATGCATCTGGCAGCCGAAAGCCATGTTGACCGTTCTATTGACGGCCCGGCAGCGTTTATTGAAACCAACATTGTCGGGACTTATACATTGCTTGAAGCGGCGCGGGCTTACTGGAATGCGCTGACGGAAGATAAAAAATCAGCGTTCCGTTTTCATCATATCTCCACTGACGAAGTATATGGTGACCTGCACTCGACGGATGATTTCTTCACCGAAACCACGCCGTATGCGCCGAGCAGCCCTTATTCCGCGTCAAAAGCCAGCAGCGACCATCTGGTGCGCGCCTGGCTGCGGACCTATGGTCTGCCGACGCTTATCACCAACTGCTCGAATAACTACGGCCCTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACGGCGTGGCGCACTATCGTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACGGCAGCTATCAGGGCGAGCGTTTAGGTCTGAAAGGCTAA", + "dna_sequence_length": 1068, + "functions": [ + "dTDP-glucose 4,6-dehydratase" + ], + "id": "CDS_3728", + "location": [ + [ + "NC_000913", + 3972522, + "+", + 1068 + ] + ], + "md5": "145fc1573073868884765bc4bfb87629", + "parent_gene": "", + "protein_md5": "32a2f8e77bb8b999859069771986b659", + "protein_translation": "MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG", + "protein_translation_length": 355, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012379" + ], + [ + "gene_synonym", + "ECK3781" + ], + [ + "gene_synonym", + "EcoGene:EG11454" + ], + [ + "gene_synonym", + "GI:16131645" + ], + [ + "gene_synonym", + "GeneID:948299" + ], + [ + "gene_synonym", + "JW3763" + ], + [ + "gene_synonym", + "NP_418236.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P61887" + ], + [ + "gene_synonym", + "b3789" + ], + [ + "gene_synonym", + "rffH" + ], + [ + "gene_synonym", + "yifG" + ] + ], + "dna_sequence": "ATGAAAGGTATTATCCTGGCGGGCGGTTCCGGCACCCGATTGCATCCGATTACGCGCGGCGTATCGAAGCAACTGTTGCCGATTTACGATAAGCCAATGATTTACTATCCGCTGTCGGTGCTGATGCTGGCCGGTATCCGCGAAATTCTCATCATCACTACGCCGGAAGATAAAGGTTATTTCCAGCGCCTGCTGGGCGATGGTAGTGAGTTCGGTATCCAGCTGGAATATGCCGAACAGCCCAGCCCGGACGGTCTGGCGCAGGCCTTTATCATCGGTGAAACCTTCCTTAATGGTGAACCTTCTTGTCTGGTGCTGGGCGATAACATCTTCTTCGGTCAGGGCTTCAGTCCGAAGCTGCGTCATGTTGCGGCGCGCACCGAAGGGGCGACGGTTTTTGGCTATCAGGTGATGGACCCGGAACGCTTTGGCGTGGTGGAGTTTGACGACAATTTCCGCGCTATCTCGCTGGAAGAAAAGCCAAAACAGCCGAAGTCAAACTGGGCGGTGACCGGGCTTTATTTCTACGACAGTAAAGTCGTGGAGTACGCAAAGCAGGTGAAGCCGTCGGAGCGTGGTGAACTGGAGATTACCTCCATCAACCAGATGTACCTCGAGGCGGGCAACCTGACCGTTGAACTGCTCGGGCGCGGATTTGCCTGGCTGGATACCGGCACTCACGACAGCCTGATTGAAGCCAGCACCTTTGTACAGACGGTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGA", + "dna_sequence_length": 882, + "functions": [ + "glucose-1-phosphate thymidylyltransferase" + ], + "id": "CDS_3729", + "location": [ + [ + "NC_000913", + 3973608, + "+", + 882 + ] + ], + "md5": "57f409aaacdf7385ae9732b1c1b9bac3", + "parent_gene": "", + "protein_md5": "b7d76c77f5a577c36c796f4a525396a0", + "protein_translation": "MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY", + "protein_translation_length": 293, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012382" + ], + [ + "gene_synonym", + "ECK3782" + ], + [ + "gene_synonym", + "EcoGene:EG11455" + ], + [ + "gene_synonym", + "GI:145698332" + ], + [ + "gene_synonym", + "GeneID:948298" + ], + [ + "gene_synonym", + "JW5597" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27832" + ], + [ + "gene_synonym", + "YP_026256.2" + ], + [ + "gene_synonym", + "b3790" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffC" + ], + [ + "gene_synonym", + "wecD" + ], + [ + "gene_synonym", + "yifH" + ] + ], + "dna_sequence": "GTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGCCGTGGTATGCGCCTGACGCCAGCAGTCGCTTTTATGCACAGTGGATTGAAAATGCCGTGCGCGGCACCTTTGATCATCAATGTCTGATTTTACGTGCGGCGTCCGGCGATATTCGCGGCTATGTCTCTTTACGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGAAAGCACCGCGTACTGGTTATACAGGTGA", + "dna_sequence_length": 675, + "functions": [ + "TDP-fucosamine acetyltransferase" + ], + "id": "CDS_3730", + "location": [ + [ + "NC_000913", + 3974467, + "+", + 675 + ] + ], + "md5": "da13241ad109fbcf8cbd717557534dc4", + "parent_gene": "", + "protein_md5": "d8d640ee974e4931916308812d82ca8e", + "protein_translation": "MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRVQAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNASDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASSRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012384" + ], + [ + "gene_synonym", + "ECK3783" + ], + [ + "gene_synonym", + "EcoGene:EG11456" + ], + [ + "gene_synonym", + "GI:16131647" + ], + [ + "gene_synonym", + "GeneID:948296" + ], + [ + "gene_synonym", + "JW3765" + ], + [ + "gene_synonym", + "NP_418238.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27833" + ], + [ + "gene_synonym", + "b3791" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffA" + ], + [ + "gene_synonym", + "wecE" + ], + [ + "gene_synonym", + "yifI" + ] + ], + "dna_sequence": "ATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCAACGTTTTGGCAGCGCCAAAGTGTTACTGACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGATGAAGTGATCATGCCGAGCTACACCTTTGTCTCCACCGCCAATGCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAATATACCTGGCGCGATATTGGCTCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCGAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCTGCACGGTTGCCCTGCGGGGGAACACTTTGGTGAGTTCCACGGTGAAGATCGCTACACCACCAAAGAGAGCGAGCGCCTGCTGCGCCTGCCGCTGTTCTACAACCTGTCGCCCGTCAATCAGCGTACGGTAATTGCGACTTTGTTGAACTACTTTTCCTGA", + "dna_sequence_length": 1131, + "functions": [ + "TDP-4-oxo-6-deoxy-D-glucose transaminase" + ], + "id": "CDS_3731", + "location": [ + [ + "NC_000913", + 3975146, + "+", + 1131 + ] + ], + "md5": "317620878bb7af2af97ea7c034842e40", + "parent_gene": "", + "protein_md5": "f5a10cc95aa77846d7b8131092c36c56", + "protein_translation": "MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFGEFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS", + "protein_translation_length": 376, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012386" + ], + [ + "gene_synonym", + "ECK3784" + ], + [ + "gene_synonym", + "EcoGene:EG11486" + ], + [ + "gene_synonym", + "GI:16131648" + ], + [ + "gene_synonym", + "GeneID:948294" + ], + [ + "gene_synonym", + "JW3766" + ], + [ + "gene_synonym", + "NP_418239.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAA7" + ], + [ + "gene_synonym", + "b3792" + ], + [ + "gene_synonym", + "wzx" + ], + [ + "gene_synonym", + "wzxE" + ], + [ + "gene_synonym", + "yifJ" + ] + ], + "dna_sequence": "ATGTCGTTGGCAAAAGCGTCCTTGTGGACGGCGGCCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGCGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTACCATGATAATCCGCAACAGCTGCGCCGCGTGGTCGGCACTTCATCAGCGATGGTACTTGGTTTCTCTACGCTGATGGCGCTGGTTTTTGTGCTGGCAGCTGCGCCAATCAGCCAGGGATTGTTTGGTAATACCGACTATCAGGGGCTGGTGCGTTTAGTGGCGCTGGTGCAAATGGGGATCGCCTGGGGCAACCTGTTACTGGCGCTGATGAAAGGCTTTCGCGATGCCGCAGGTAATGCGTTATCGCTGATTGTCGGCAGCTTGATTGGCGTTCTCGCGTACTACGTCAGTTACCGTTTGGGCGGTTATGAAGGGGCGTTGCTGGGTCTGGCGCTGATTCCCGCGCTGGTGGTAATTCCTGCCGCCATCATGTTGATCAAACGTGGTGTCATCCCGTTAAGCTATCTGAAACCCAGCTGGGATAACGGTCTGGCAGGGCAGTTGAGCAAATTTACGCTCATGGCGTTGATTACGTCGGTGACCTTGCCTGTTGCTTACATCATGATGCGTAAACTGCTGGCGGCGCAGTATAGCTGGGATGAGGTGGGGATCTGGCAAGGGGTGAGCAGTATTTCCGATGCCTACCTGCAATTTATTACGGCATCGTTCAGCGTATATTTGCTGCCCACGTTGTCGCGGCTAACGGAAAAGCGCGATATCACCCGGGAAGTGGTTAAATCGCTGAAATTCGTCTTACCGGCAGTGGCGGCGGCGAGTTTTACCGTCTGGCTGCTGCGTGATTTTGCTATCTGGCTGCTGTTGTCGAATAAATTTACCGCTATGCGCGATCTCTTTGCCTGGCAGTTAGTGGGTGATGTGTTAAAAGTGGGCGCTTATGTCTTTGGTTATCTGGTGATCGCCAAAGCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGA", + "dna_sequence_length": 1251, + "functions": [ + "O-antigen translocase" + ], + "id": "CDS_3732", + "location": [ + [ + "NC_000913", + 3976278, + "+", + 1251 + ] + ], + "md5": "3c8bc8b70d1a4954b523132bed324842", + "parent_gene": "", + "protein_md5": "5e48f84aa5ae7f1793eb12dc593c0fcd", + "protein_translation": "MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFRQLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAAAPISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGVLAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLSKFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA", + "protein_translation_length": 416, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174115" + ], + [ + "gene_synonym", + "ECK3785" + ], + [ + "gene_synonym", + "EcoGene:EG14320" + ], + [ + "gene_synonym", + "GI:49176413" + ], + [ + "gene_synonym", + "GeneID:2847677" + ], + [ + "gene_synonym", + "JW5596" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56258" + ], + [ + "gene_synonym", + "YP_026257.1" + ], + [ + "gene_synonym", + "b4481" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffT" + ], + [ + "gene_synonym", + "wecF" + ], + [ + "gene_synonym", + "yifM" + ] + ], + "dna_sequence": "ATGACTGTACTGATTCACGTACTGGGATCGGATATCCCTCACCATAACCGAACCGTTTTGCGGTTTTTCAATGACGCGCTGGCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACGATGGCGAACGATCGGCAACGTGAAGGGAAAATGACCATTCTGGTGGGGAACTCCGGCGACCGCAGCAATGAGCATATTGCTGCCTTGCGCGCCGTTCATCAGCAATTTGGCGATACGGTAAAAGTGGTGGTGCCGATGGGATATCCGCCTAATAACGAAGCGTACATTGAGGAAGTTCGTCAGGCGGGGCTGGAGTTATTCAGCGAAGAAAATCTACAAATTCTGAGCGAAAAACTGGAATTTGACGCCTATCTGGCGCTACTTCGTCAGTGCGATCTTGGTTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGAAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATTGTGCGTGAAGCGCAGCGCCAGTTGGCGTCGGTGGATAAAAACACCATTGCCTTCTTTAGCCCTAACTATCTACAAGGCTGGCAGCGGGCGTTGGCGATTGCCGCCAGGGAGGTCGCATGA", + "dna_sequence_length": 1080, + "functions": [ + "TDP-Fuc4NAc:lipidIIFuc4NAc transferase" + ], + "id": "CDS_3733", + "location": [ + [ + "NC_000913", + 3977525, + "+", + 1080 + ] + ], + "md5": "f804416b6b8357c74d6cfe2c44174e9e", + "parent_gene": "", + "protein_md5": "6bf932ff6fa023d3d29007ab797a95fb", + "protein_translation": "MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLFFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNEHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAREVA", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012392" + ], + [ + "gene_synonym", + "ECK3786" + ], + [ + "gene_synonym", + "EcoGene:EG11457" + ], + [ + "gene_synonym", + "GI:16131649" + ], + [ + "gene_synonym", + "GeneID:948293" + ], + [ + "gene_synonym", + "JW3769" + ], + [ + "gene_synonym", + "NP_418241.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27835" + ], + [ + "gene_synonym", + "b3793" + ], + [ + "gene_synonym", + "rffT" + ], + [ + "gene_synonym", + "wzyE" + ] + ], + "dna_sequence": "ATGAGTCTGCTGCAATTCAGTGGCCTGTTTGTTGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTGCGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCTTTTACTTTTTCATCCCGGCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTCGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAGCGTTCTATACGTTTCTCTATCTCACTCGCGACACCTTCTCGCCGTGGGAGAATCTGGCGTTGCTGTTGCAGAACTACGACAACATCGACTTCCAGGGCCTGGCTCCAATTGTCCGCGATTTCTATGTCTTTATCCCTTCCTGGCTGTGGCCGGGTCGCCCGAGTATGGTGCTGAACTCAGCCAACTACTTTACCTGGGAAGTGCTGAATAACCACTCCGGACTGGCGATCTCGCCTACGCTTATAGGCTCACTGGTGGTGATGGGCGGCGCGTTGTTCATCCCGCTCGGGGCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTCTTCGGCGCATGTCTGATGATCGCAAAACTGTTGTACTGGCTTTTTGAAAGCGCCGGACTCATTCATAAACGTACAAAATCATCGCTCCGGACGCAGGTTGAAGGATAA", + "dna_sequence_length": 1353, + "functions": [ + "putative ECA polysaccharide chain elongation protein" + ], + "id": "CDS_3734", + "location": [ + [ + "NC_000913", + 3978601, + "+", + 1353 + ] + ], + "md5": "2eae9cf524421160ae21e586006fa816", + "parent_gene": "", + "protein_md5": "57545119ea045da1671ae8663a816de5", + "protein_translation": "MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPRRPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012394" + ], + [ + "gene_synonym", + "ECK3787" + ], + [ + "gene_synonym", + "EcoGene:EG11458" + ], + [ + "gene_synonym", + "GI:16131650" + ], + [ + "gene_synonym", + "GeneID:948301" + ], + [ + "gene_synonym", + "JW3770" + ], + [ + "gene_synonym", + "NP_418242.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27836" + ], + [ + "gene_synonym", + "b3794" + ], + [ + "gene_synonym", + "rff" + ], + [ + "gene_synonym", + "rffM" + ], + [ + "gene_synonym", + "wecG" + ] + ], + "dna_sequence": "ATGAATAACAACACCACGGCACCAACCTATACGCTGCGTGGCTTACAGTTGATTGGTTGGCGTGATATGCAGCACGCCCTCGATTATCTGTTTGCTGACGGGCAGCTTAAGCAGGGAACGCTGGTTGCCATTAATGCTGAAAAAATGCTGACTATTGAAGATAACGCCGAGGTCAGGGAGTTAATTAACGCTGCCGAATTTAAATATGCGGATGGCATCAGCGTTGTACGTTCAGTACGTAAAAAGTACCCGCAGGCGCAGGTTTCCCGCGTTGCCGGTGCCGATCTCTGGGAAGAGCTGATGGCGCGCGCAGGCAAAGAAGGGACGCCGGTATTTCTTGTGGGCGGTAAACCTGAAGTGCTGGCGCAAACTGAAGCTAAACTGCGCAACCAGTGGAATGTGAATATCGTTGGCAGTCAGGATGGTTATTTTAAACCCGAGCAGCGTCAGGCGCTGTTTGAACGCATTCATGCCAGCGGTGCGCAAATCGTCACCGTTGCGATGGGATCGCCAAAGCAGGAGATCATCATGCGCGACTGCCGTCTGGTACATCCAGATGCGCTGTATATGGGCGTTGGCGGGACTTACGATGTTTTCACCGGTCACGTAAAACGCGCACCGAAAATCTGGCAAACGCTGGGGCTGGAGTGGCTCTACCGCCTGCTTTCGCAGCCGAGCCGCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGA", + "dna_sequence_length": 741, + "functions": [ + "UDP-N-acetyl-D-mannosaminuronic acid transferase" + ], + "id": "CDS_3735", + "location": [ + [ + "NC_000913", + 3979956, + "+", + 741 + ] + ], + "md5": "d52e480112d19f15084d30d38c285523", + "parent_gene": "", + "protein_md5": "7bcb3ae05418b073014427bca8aecada", + "protein_translation": "MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAINAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMARAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASGAQIVTVAMGSPKQEIIMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWLYRLLSQPSRIKRQLRLLRYLRWHYTGNL", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012397" + ], + [ + "gene_synonym", + "ECK3788" + ], + [ + "gene_synonym", + "EcoGene:EG11459" + ], + [ + "gene_synonym", + "GI:49176414" + ], + [ + "gene_synonym", + "GeneID:945400" + ], + [ + "gene_synonym", + "JW5595" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27837" + ], + [ + "gene_synonym", + "YP_026258.1" + ], + [ + "gene_synonym", + "b3795" + ], + [ + "gene_synonym", + "yifK" + ] + ], + "dna_sequence": "ATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGGGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTGGGGATCTCTGAAATCACCGCCATTGGCGTTTATGTCCAGTTCTGGTTCCCGGAGATGGCGCAGTGGATACCCGCATTGATCGCAGTGGCGCTGGTGGCGTTGGCGAATCTGGCGGCGGTGCGGTTGTACGGCGAAATCGAGTTCTGGTTCGCGATGATCAAAGTCACCACGATTATCGTGATGATTGTCATTGGCCTGGGCGTGATTTTCTTTGGCTTTGGCAATGGCGGGCAGTCGATTGGTTTTAGCAATCTCACAGAGCATGGCGGTTTCTTTGCGGGTGGCTGGAAAGGGTTCCTGACCGCTCTGTGTATTGTGGTGGCGTCCTACCAGGGCGTGGAGCTGATTGGCATTACTGCCGGTGAAGCGAAGAATCCGCAGGTGACGCTGCGCAGTGCCGTAGGCAAGGTGCTGTGGCGGATCCTGATTTTCTACGTAGGCGCGATTTTCGTTATCGTCACCATCTTCCCGTGGAATGAAATAGGCAGCAACGGCAGCCCGTTCGTACTGACTTTTGCCAAAATCGGTATTACCGCAGCGGCGGGCATTATCAACTTTGTGGTGCTGACGGCTGCGCTCTCTGGCTGTAACAGCGGCATGTACAGTTGCGGACGTATGCTCTACGCACTGGCGAAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGATAAGCCAGCTGCGTTTTCGGCGTGCACATAAAGCGGCGATTGCCAGCCATCCGTTCCGCTCAATCCTGTTCCCGTGGGCCAATTACGTAACAATGGCATTCCTGATTTGCGTTTTGATCGGCATGTACTTTAATGAAGATACGCGTATGTCGCTGTTTGTTGGCATCATCTTTATGCTGGCGGTGACGGCGATTTATAAAGTTTTTGGCCTTAATCGCCACGGGAAAGCGCATAAACTGGAGGAATAA", + "dna_sequence_length": 1386, + "functions": [ + "putative APC family amino acid transporter" + ], + "id": "CDS_3736", + "location": [ + [ + "NC_000913", + 3980887, + "+", + 1386 + ] + ], + "md5": "d48bb65b8b84cdcc70d48141b1266158", + "parent_gene": "", + "protein_md5": "841c5204136ea32468432b62f37eaee1", + "protein_translation": "MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGLNRHGKAHKLEE", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012408" + ], + [ + "gene_synonym", + "ECK3793" + ], + [ + "gene_synonym", + "EcoGene:EG10090" + ], + [ + "gene_synonym", + "GI:49176415" + ], + [ + "gene_synonym", + "GeneID:949013" + ], + [ + "gene_synonym", + "JW5594" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25550" + ], + [ + "gene_synonym", + "YP_026259.1" + ], + [ + "gene_synonym", + "aslB" + ], + [ + "gene_synonym", + "atsB" + ], + [ + "gene_synonym", + "b3800" + ], + [ + "gene_synonym", + "gppB" + ] + ], + "dna_sequence": "ATGCTGCAACAGGTTCCAACGCGTGCTTTTCATGTGATGGCGAAACCGAGCGGTTCCGATTGTAATCTGAACTGTGACTACTGTTTTTATCTCGAAAAACAATCCCTTTACCGCGAAAAGCCAGTCACGCATATGGACGATGACACGCTGGAAGCGTATGTCCGTCACTATATCGCTGCCAGCGAACCGCAAAACGAAGTGGCTTTTACCTGGCAGGGCGGCGAACCAACGCTACTCGGGCTGGCGTTTTACCGCCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCTCCTGCAAAAACATCATGTCGACTATAACGTGCTGGTCTGCGTTAATCGCACCAGCGCGCAGCAACCGTTGCAGGTATATGATTTTTTGTGCGATGCGGGAGTCGAATTCATCCAGTTTATTCCGGTGGTCGAGCGCCTGGCTGATGAAACAACTGCCCGCGATGGACTTAAGTTACATGCGCCTGGTGATATTCAGGGTGAGCTAACGGAATGGTCGGTGCGCCCCGAGGAGTTCGGTGAGTTTCTGGTGGCGATATTCGACCACTGGATCAAACGCGACGTCGGCAAGATTTTCGTGATGAATATCGAATGGGCGTTTGCCAATTTTGTCGGTGCGCCGGGTGCGGTTTGCCATCATCAGCCAACCTGTGGGCGCTCGGTGATTGTTGAGCACAACGGCGACGTTTACGCCTGTGATCACTATGTTTATCCGCAATATCGGCTGGGGAATATGCACCAGCAAACAATTGCAGAAATGATCGATTCCCCGCAACAGCAGGCGTTTGGTGAAGATAAATTTAAGCAGTTACCGGCGCAGTGTCGCAGTTGTAACGTGTTAAAAGCGTGCTGGGGAGGCTGCCCGAAACACCGCTTCATGCTCGATGCCAGCGGCAAACCGGGACTGAATTATTTGTGTGCCGGGTATCAGCGTTATTTCCGCCATCTACCGCCATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAG", + "dna_sequence_length": 1236, + "functions": [ + "putative AslA-specific sulfatase-maturating enzyme" + ], + "id": "CDS_3737", + "location": [ + [ + "NC_000913", + 3982958, + "+", + 1236 + ] + ], + "md5": "20cee5e5d0e3622f279ca3cc6412111e", + "parent_gene": "", + "protein_md5": "65f0340619ab4eb85faa86197b9a7c9f", + "protein_translation": "MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLAFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAEHHFLVGLSLDGPPEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETTARDGLKLHAPGDIQGELTEWSVRPEEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMHAHLLVVSK", + "protein_translation_length": 411, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012411" + ], + [ + "gene_synonym", + "ECK3794" + ], + [ + "gene_synonym", + "EcoGene:EG10089" + ], + [ + "gene_synonym", + "GI:16131653" + ], + [ + "gene_synonym", + "GeneID:949015" + ], + [ + "gene_synonym", + "JW3773" + ], + [ + "gene_synonym", + "NP_418245.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25549" + ], + [ + "gene_synonym", + "aslA" + ], + [ + "gene_synonym", + "atsA" + ], + [ + "gene_synonym", + "b3801" + ], + [ + "gene_synonym", + "gppB" + ] + ], + "dna_sequence": "ATGGAATTTTCGTTTTCACCCAAACGTCTTGTTGTTGCTGTCGCCGCCGCTCTTCCTCTCATGGCCAGCGCAGCAGATACCCCGTCAACTGCCACCGCACGCAAAGGCTTTGCCGGATACGATCACCCAAACCAGTATCTGGTTAAACCGGCGACCACTATTGCCGACAATATGATGCCAGTAATGCAGCATCCGGCGCAGGATAAAGAAACCCAGCAGAAGCTGGCAGAACTTGAGAAAAAAACCGGTAAGAAACCGAATGTGGTTGTTTTCTTGCTGGACGATGTGGGCTGGATGGACGTCGGTTTTAACGGTGGCGGCGTGGCGGTGGGTAACCCTACACCAGATATCGACGCCGTTGCCAGCCAGGGGCTGATTTTAACTTCGGCGTATTCTCAACCAAGCTCTTCCCCAACCCGCGCCACCATTCTCACCGGACAATACTCCATCCACCACGGCATTCTGATGCCGCCAATGTACGGGCAACCGGGCGGGCTGCAAGGGTTAACCACGCTGCCGCAGTTGCTGCACGATCAGGGCTACGTCACTCAGGCCATCGGAAAATGGCATATGGGGGAAAACAAAGAGTCGCAGCCGCAGAACGTTGGCTTTGATGATTTCCGTGGCTTTAACTCGGTGTCTGATATGTACACCGAATGGCGCGACGTTCACGTCAATCCGGAAGTGGCCCTGAGTCCGGACCGTTCTGAATACATCAAGCAATTACCGTTCAGCAAAGATGACGTTCATGCGGTGCGCGGCGGCGAACAACAGGCCATTGCCGACATTACGCCGAAATATATGGAAGATCTGGATCAACGCTGGATGGACTATGGCGTTAAGTTCCTCGACAAGATGGCGAAGAGCGATAAACCATTCTTCCTCTACTACGGCACTCGTGGCTGCCACTTCGATAACTACCCAAATGCGAAATATGCGGGTAGCTCTCCGGCACGCACCTCGTATGGCGACTGCATGGTGGAGATGAACGATGTGTTCGCTAATCTGTATAAAACACTGGAGAAAAACGGTCAGCTTGATAACACGCTGATCGTCTTTACCTCCGATAACGGACCGGAAGCCGAAGTACCGCCGCACGGACGCACCCCGTTCCGTGGTGCGAAAGGTTCGACCTGGGAAGGCGGCGTTCGCGTACCGACTTTCGTTTACTGGAAAGGGATGATCCAACCGCGTAAATCTGACGGTATTGTCGATCTGGCAGATCTCTTCCCTACCGCGCTGGATCTGGCAGGGCATCCTGGAGCGAAAGTGGCGAATTTAGTGCCGAAAACCACCTTTATCGATGGTGTGGACCAGACATCCTTCTTCCTGGGAACAAATGGTCAGTCTAACCGTAAGGCCGAGCACTACTTCCTCAACGGTAAACTCGCTGCTGTGCGTATGGATGAGTTCAAGTATCACGTCCTGATTCAGCAACCTTACGCTTATACCCAGAGCGGATATCAGGGTGGATTCACCGGCACAGTAATGCAAACGGCGGGATCGTCGGTGTTTAACCTCTACACCGATCCGCAGGAAAGCGACTCCATCGGCGTGCGCCATATTCCGATGGGTGTACCGCTACAGACCGAAATGCACGCGTATATGGAGATCCTGAAAAAATATCCACCACGCGCGCAGATTAAATCTGACTAA", + "dna_sequence_length": 1656, + "functions": [ + "putative Ser-type periplasmic non-aryl sulfatase" + ], + "id": "CDS_3738", + "location": [ + [ + "NC_000913", + 3986007, + "-", + 1656 + ] + ], + "md5": "0325c65c3d7ac44533fb5ffb0fa77c7f", + "parent_gene": "", + "protein_md5": "f9084b6015014fd7f1d4ebb2832ca225", + "protein_translation": "MEFSFSPKRLVVAVAAALPLMASAADTPSTATARKGFAGYDHPNQYLVKPATTIADNMMPVMQHPAQDKETQQKLAELEKKTGKKPNVVVFLLDDVGWMDVGFNGGGVAVGNPTPDIDAVASQGLILTSAYSQPSSSPTRATILTGQYSIHHGILMPPMYGQPGGLQGLTTLPQLLHDQGYVTQAIGKWHMGENKESQPQNVGFDDFRGFNSVSDMYTEWRDVHVNPEVALSPDRSEYIKQLPFSKDDVHAVRGGEQQAIADITPKYMEDLDQRWMDYGVKFLDKMAKSDKPFFLYYGTRGCHFDNYPNAKYAGSSPARTSYGDCMVEMNDVFANLYKTLEKNGQLDNTLIVFTSDNGPEAEVPPHGRTPFRGAKGSTWEGGVRVPTFVYWKGMIQPRKSDGIVDLADLFPTALDLAGHPGAKVANLVPKTTFIDGVDQTSFFLGTNGQSNRKAEHYFLNGKLAAVRMDEFKYHVLIQQPYAYTQSGYQGGFTGTVMQTAGSSVFNLYTDPQESDSIGVRHIPMGVPLQTEMHAYMEILKKYPPRAQIKSD", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012417" + ], + [ + "gene_synonym", + "ECK3796" + ], + [ + "gene_synonym", + "EcoGene:EG10434" + ], + [ + "gene_synonym", + "GI:16131654" + ], + [ + "gene_synonym", + "GeneID:948311" + ], + [ + "gene_synonym", + "JW3774" + ], + [ + "gene_synonym", + "NP_418246.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB7" + ], + [ + "gene_synonym", + "b3802" + ], + [ + "gene_synonym", + "hemY" + ] + ], + "dna_sequence": "ATGCTAAAAGTGTTATTGCTCTTTGTGTTGCTGATTGCGGGGATCGTGGTTGGCCCGATGATTGCCGGCCATCAGGGTTATGTGCTGATCCAGACCGACAACTACAATATCGAAACCAGCGTCACGGGCCTGGCGATCATATTGATTCTGGCGATGGTAGTGCTGTTTGCCATTGAGTGGCTACTGCGGCGGATCTTCCGCACTGGCGCGCACACCCGTGGGTGGTTTGTCGGACGTAAGCGTCGCCGTGCACGTAAGCAGACCGAACAGGCGCTGCTGAAACTGGCGGAAGGCGATTATCAGCAAGTTGAAAAGCTGATGGCGAAAAATGCCGATCACGCGGAACAACCGGTGGTGAACTATCTACTGGCTGCCGAAGCCGCGCAACAACGTGGTGATGAAGCACGCGCCAACCAACATCTGGAACGCGCAGCGGAGCTGGCCGGCAACGACACCATTCCGGTAGAAATCACCCGCGTACGTCTGCAACTGGCCCGTAATGAAAACCATGCTGCACGCCACGGCGTGGATAAGCTGCTGGAAGTTACGCCACGCCATCCGGAAGTATTACGTCTGGCGGAACAGGCGTATATCCGCACAGGTGCATGGAGTTCGCTGCTGGATATTATCCCATCAATGGCGAAAGCCCATGTTGGTGATGAAGAACATCGTGCAATGCTGGAACAACAGGCATGGATTGGCCTGATGGATCAGGCGCGTGCCGATAACGGTAGCGAAGGTTTGCGTAACTGGTGGAAAAACCAAAGCCGGAAAACGCGTCATCAGGTAGCGTTGCAGGTGGCAATGGCGGAACATCTTATTGAATGTGACGATCATGATACTGCCCAGCAAATTATCATCGATGGCCTGAAACGCCAGTACGACGATCGCCTACTGCTGCCGATTCCTCGACTGAAAACAAACAATCCGGAACAGCTGGAAAAAGTGCTGCGCCAGCAAATCAAAAACGTCGGCGATCGCCCGCTGTTGTGGAGCACACTGGGCCAGTCACTGATGAAGCACGGAGAATGGCAGGAAGCATCGCTCGCCTTCCGCGCAGCGCTGAAACAACGTCCGGACGCCTACGATTACGCATGGCTTGCCGACGCGCTGGACAGACTGCACAAGCCGGAAGAAGCTGCAGCTATGCGTCGCGACGGTTTGATGTTAACGTTGCAGAATAACCCGCCACAGTAG", + "dna_sequence_length": 1197, + "functions": [ + "putative protoheme IX synthesis protein" + ], + "id": "CDS_3739", + "location": [ + [ + "NC_000913", + 3987882, + "-", + 1197 + ] + ], + "md5": "72603bbaf289a0bb1ea6ce4940036ad6", + "parent_gene": "", + "protein_md5": "149fb7a87508140bd49dfb75a2489068", + "protein_translation": "MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTLQNNPPQ", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012419" + ], + [ + "gene_synonym", + "ECK3797" + ], + [ + "gene_synonym", + "EcoGene:EG10433" + ], + [ + "gene_synonym", + "GI:16131655" + ], + [ + "gene_synonym", + "GeneID:948446" + ], + [ + "gene_synonym", + "JW3775" + ], + [ + "gene_synonym", + "NP_418247.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09127" + ], + [ + "gene_synonym", + "b3803" + ], + [ + "gene_synonym", + "hemX" + ] + ], + "dna_sequence": "ATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAGAGACCAGGGAGGCCGTGGACACCACGTCACAACCTGTCGCAACAGAAAAAAAGAGTAAGAACAATACCGCATTGATTCTCAGCGCGGTGGCTATCGCTATTGCTCTGGCGGCGGGCATCGGTTTGTATGGCTGGGGTAAACAACAGGCCGTCAATCAGACCGCCACCAGCGATGCCCTGGCTAACCAACTGACGGCATTGCAAAAAGCCCAGGAGAGCCAAAAAGCCGAGCTGGAAGGCATTATTAAGCAACAAGCTGCACAACTTAAGCAGGCGAATCGTCAGCAAGAAACGCTGGCAAAACAGTTGGATGAAGTCCAACAAAAGGTCGCCACCATTTCCGGCAGCGATGCTAAAACCTGGCTGCTGGCTCAGGCCGATTTTCTGGTGAAACTCGCCGGACGGAAGCTGTGGAGCGATCAGGACGTCACGACCGCTGCAGCGTTGCTGAAAAGTGCAGACGCCAGCCTGGCGGATATGAATGACCCGAGTCTGATTACCGTTCGTCGGGCAATTACCGATGATATCGCCAGCCTTTCTGCAGTATCGCAGGTGGATTATGACGGCATCATCCTTAAGCTTAATCAGCTTTCAAATCAGGTAGATAACCTGCGTCTGGCCGATAATGACAGCGATGGTTCGCCGATGGATTCAGACGGTGAAGAGCTTTCCAGTTCCATCAGCGAATGGCGTATCAATCTGCAAAAAAGCTGGCAGAACTTTATGGACAACTTCATTACGATTCGCCGTCGTGATGACACCGCCGTACCGCTGTTAGCGCCAAATCAGGATATCTATCTGCGCGAAAATATTCGCTCTCGCCTGCTGGTCGCAGCACAAGCTGTACCGCGTCACCAGGAAGAGACTTATCGCCAGGCGCTGGAGAACGTCTCCACCTGGGTACGTGCTTACTACGATACTGATGATGCCACCACCAAAGCGTTCCTCGACGAGGTGGACCAGTTAAGCCAGCAAAATATCTCGATGGATCTTCCGGAAACCCTGCAAAGCCAGGCGATGCTGGAAAAACTGATGCAGACTCGCGTGCGTAACCTGCTGGCACAACCGGCAGCGGGGACAACGGAAGCTAAACCTGCACCTGCACCGCAAGCTGATACTCCGGCAGCCGCGCCGCAAGGAGAATAA", + "dna_sequence_length": 1182, + "functions": [ + "putative uroporphyrinogen III methyltransferase" + ], + "id": "CDS_3740", + "location": [ + [ + "NC_000913", + 3989066, + "-", + 1182 + ] + ], + "md5": "b495df143d68a03830e48468a6ac7daf", + "parent_gene": "", + "protein_md5": "ae73e0483e8bfc4a241ff6133c934787", + "protein_translation": "MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGIGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLKQANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPQADTPAAAPQGE", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012425" + ], + [ + "gene_synonym", + "ECK3798" + ], + [ + "gene_synonym", + "EcoGene:EG10430" + ], + [ + "gene_synonym", + "GI:16131656" + ], + [ + "gene_synonym", + "GeneID:948587" + ], + [ + "gene_synonym", + "JW3776" + ], + [ + "gene_synonym", + "NP_418248.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09126" + ], + [ + "gene_synonym", + "b3804" + ], + [ + "gene_synonym", + "hemD" + ] + ], + "dna_sequence": "ATGAGTATCCTTGTCACCCGCCCGTCTCCCGCTGGAGAAGAGTTAGTGAGCCGTCTGCGCACACTGGGGCAGGTGGCCTGGCATTTTCCGCTGATTGAGTTTTCTCCGGGTCAACAATTACCGCAACTTGCTGATCAACTGGCAGCGCTGGGGGAGAGCGATCTGTTGTTTGCCCTCTCGCAACACGCGGTTGCTTTTGCCCAATCACAGCTGCATCAGCAAGATCGTAAATGGCCCCGACTACCTGATTATTTCGCCATTGGACGCACCACCGCACTGGCACTACATACCGTAAGTGGACAGAAGATTCTCTACCCGCAGGATCGGGAAATCAGCGAAGTCTTGCTACAATTACCTGAATTACAAAATATTGCGGGCAAACGTGCGCTGATATTACGTGGCAATGGTGGTCGTGAGCTAATTGGGGATACCCTGACGGCGCGCGGTGCTGAGGTCACTTTTTGTGAATGTTATCAACGATGCGCAATCCATTACGATGGTGCAGAAGAAGCGATGCGCTGGCAAGCCCGCGAGGTGACGATGGTCGTTGTTACCAGCGGTGAAATGTTGCAGCAACTCTGGTCGCTGATCCCACAATGGTATCGTGAGCACTGGTTACTACACTGTCGACTATTGGTCGTCAGTGAGCGTTTGGCGAAACTCGCCCGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAA", + "dna_sequence_length": 741, + "functions": [ + "uroporphyrinogen III synthase" + ], + "id": "CDS_3741", + "location": [ + [ + "NC_000913", + 3989828, + "-", + 741 + ] + ], + "md5": "4b0ad72e5cffc05520f8d1b5b174761e", + "parent_gene": "", + "protein_md5": "2bdb56bd10d40c90391ee7b0246b6286", + "protein_translation": "MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012427" + ], + [ + "gene_synonym", + "ECK3799" + ], + [ + "gene_synonym", + "EcoGene:EG10429" + ], + [ + "gene_synonym", + "GI:49176416" + ], + [ + "gene_synonym", + "GeneID:947759" + ], + [ + "gene_synonym", + "JW5932" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06983" + ], + [ + "gene_synonym", + "YP_026260.1" + ], + [ + "gene_synonym", + "b3805" + ], + [ + "gene_synonym", + "hemC" + ], + [ + "gene_synonym", + "popE" + ] + ], + "dna_sequence": "ATGTTAGACAATGTTTTAAGAATTGCCACACGCCAAAGCCCACTTGCACTCTGGCAGGCACACTATGTCAAAGACAAGTTGATGGCGAGCCATCCGGGCCTGGTCGTTGAACTGGTACCGATGGTGACGCGCGGCGATGTGATTCTTGATACGCCGCTGGCGAAAGTAGGCGGAAAAGGCTTATTTGTAAAAGAGCTGGAAGTCGCGCTCCTCGAAAATCGCGCCGATATCGCCGTACACTCAATGAAAGATGTGCCGGTTGAATTCCCGCAAGGTCTGGGACTGGTCACTATTTGTGAGCGTGAAGATCCTCGCGATGCCTTTGTGTCCAATAACTATGACAGTCTGGATGCGTTACCGGCAGGCAGTATCGTCGGGACGTCCAGTTTACGTCGCCAGTGCCAACTGGCTGAACGCCGTCCGGATCTGATTATCCGCTCCCTGCGCGGCAACGTCGGCACTCGCCTGAGCAAACTGGATAACGGCGAATACGATGCCATCATTCTTGCCGTAGCCGGACTAAAACGTTTAGGTCTGGAGTCACGTATTCGCGCCGCGTTGCCACCCGAGATTTCTCTTCCGGCGGTAGGACAAGGTGCGGTGGGTATTGAATGCCGCCTTGATGATTCACGCACTCGCGAGCTGCTTGCCGCGCTGAATCACCACGAAACTGCACTGCGCGTTACCGCAGAACGCGCCATGAATACCCGTCTCGAAGGCGGATGTCAGGTGCCAATTGGTAGCTACGCCGAGCTTATTGATGGCGAAATCTGGCTGCGTGCGCTGGTCGGCGCGCCGGACGGTTCGCAGATTATTCGCGGTGAACGCCGCGGTGCGCCGCAAGATGCCGAACAAATGGGGATTTCGCTGGCAGAAGAGCTACTGAATAACGGCGCGCGCGAGATCCTCGCTGAAGTCTATAACGGAGACGCCCCGGCATGA", + "dna_sequence_length": 942, + "functions": [ + "hydroxymethylbilane synthase" + ], + "id": "CDS_3742", + "location": [ + [ + "NC_000913", + 3990766, + "-", + 942 + ] + ], + "md5": "61cecbc3b88eafef7e6e9d79dd6d5a06", + "parent_gene": "", + "protein_md5": "e821f2f40f67955d52f2418a6c928b16", + "protein_translation": "MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012432" + ], + [ + "gene_synonym", + "ECK3800" + ], + [ + "gene_synonym", + "EcoGene:EG10170" + ], + [ + "gene_synonym", + "GI:16131658" + ], + [ + "gene_synonym", + "GeneID:947755" + ], + [ + "gene_synonym", + "JW3778" + ], + [ + "gene_synonym", + "NP_418250.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00936" + ], + [ + "gene_synonym", + "b3806" + ], + [ + "gene_synonym", + "cya" + ], + [ + "gene_synonym", + "cyaA" + ] + ], + "dna_sequence": "TTGTACCTCTATATTGAGACTCTGAAACAGAGACTGGATGCCATAAATCAATTGCGTGTGGATCGCGCGCTTGCTGCTATGGGGCCTGCATTCCAACAGGTCTACAGTCTACTGCCGACATTGTTGCACTATCACCATCCGCTAATGCCGGGTTACCTTGATGGTAACGTTCCCAAAGGCATTTGCCTTTACACGCCTGATGAAACTCAACGCCACTACCTGAACGAGCTTGAACTGTATCGTGGAATGTCAGTACAGGATCCGCCGAAAGGTGAGCTTCCAATTACTGGTGTATACACCATGGGCAGCACCTCGTCCGTAGGGCAAAGTTGTTCCTCTGACCTGGATATCTGGGTCTGTCATCAATCCTGGCTCGATAGCGAAGAGCGCCAATTGCTACAACGTAAATGTAGCCTGCTGGAAAACTGGGCCGCCTCGCTGGGTGTGGAAGTCAGCTTCTTCCTGATTGATGAAAACCGCTTCCGTCATAATGAAAGCGGCAGCCTGGGGGGCGAAGATTGTGGCTCCACCCAGCATATACTGCTGCTTGACGAATTTTATCGTACCGCCGTGCGTCTCGCCGGTAAGCGTATTCTGTGGAATATGGTGCCGTGCGACGAAGAAGAGCATTACGACGACTATGTGATGACGCTTTACGCGCAGGGCGTGCTGACGCCAAATGAATGGCTGGATCTCGGTGGCTTAAGCTCGCTTTCTGCTGAAGAGTACTTTGGTGCCAGCCTTTGGCAGCTCTACAAGAGTATCGATTCCCCATACAAAGCGGTACTGAAAACACTGCTGCTGGAAGCCTATTCCTGGGAATACCCGAACCCACGTCTGCTGGCGAAAGATATCAAACAGCGTTTGCACGACGGCGAGATTGTATCGTTTGGTCTCGATCCATACTGCATGATGCTGGAGCGTGTTACTGAATACCTGACGGCGATTGAAGATTTTACCCGTCTGGATTTAGTACGTCGCTGCTTCTATTTAAAAGTGTGCGAAAAGCTCAGCCGTGAACGCGCCTGCGTAGGCTGGCGTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAATTACCGGCGGTGGTGGACGGCTTTGCCAGCGAAGGGATCATCCAGTTCTTTTTCGAAGAAACGCAAGACGAGAATGGCTTTAATATCTACATTCTCGACGAAAGCAACCGGGTTGAGGTATATCACCACTGCGAAGGCAGCAAAGAGGAGCTGGTACGTGACGTCAGTCGCTTCTACTCGTCATCGCATGACCGTTTTACCTACGGCTCAAGCTTCATCAACTTCAACCTGCCGCAGTTCTATCAGATTGTGAAGGTTGATGGTCGTGAACAGGTGATTCCGTTCCGCACAAAATCTATCGGTAACATGCCGCCTGCCAATCAGGATCACGATACGCCGCTATTACAGCAATATTTTTCGTGA", + "dna_sequence_length": 2547, + "functions": [ + "adenylate cyclase" + ], + "id": "CDS_3743", + "location": [ + [ + "NC_000913", + 3991153, + "+", + 2547 + ] + ], + "md5": "388781ad3ae0e001945e3aa3ed44e6eb", + "parent_gene": "", + "protein_md5": "5487d1a07256ae9e54bce16d3e1bdc0a", + "protein_translation": "MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMGSTSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLENWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTLYAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVCEKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLTFIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLYIKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEGIIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS", + "protein_translation_length": 848, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012435" + ], + [ + "gene_synonym", + "ECK3801" + ], + [ + "gene_synonym", + "EcoGene:EG11653" + ], + [ + "gene_synonym", + "GI:16131659" + ], + [ + "gene_synonym", + "GeneID:947754" + ], + [ + "gene_synonym", + "JW3779" + ], + [ + "gene_synonym", + "NP_418251.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27838" + ], + [ + "gene_synonym", + "b3807" + ], + [ + "gene_synonym", + "cyaY" + ] + ], + "dna_sequence": "ATGAACGACAGTGAATTTCATCGCCTGGCTGATCAACTCTGGCTGACCATTGAAGAACGCCTGGACGACTGGGATGGCGACAGCGATATCGACTGCGAAATCAACGGCGGCGTACTGACCATTACCTTTGAGAATGGCAGCAAAATCATTATCAACCGCCAGGAGCCGCTGCACCAGGTATGGCTGGCAACCAAACAGGGCGGCTACCATTTTGACCTGAAAGGCGATGAGTGGATTTGTGATCGCAGCGGCGAAACCTTCTGGGATTTGCTGGAACAGGCGGCGACGCAGCAGGCGGGTGAAACAGTCAGTTTCCGCTAA", + "dna_sequence_length": 321, + "functions": [ + "iron-dependent inhibitor of iron-sulfur cluster formation", + "frataxin", + "iron-binding and oxidizing protein" + ], + "id": "CDS_3744", + "location": [ + [ + "NC_000913", + 3994059, + "-", + 321 + ] + ], + "md5": "31aa247f48d5e5e831eff4abd0b82f13", + "parent_gene": "", + "protein_md5": "361a48ee9873e2216b08d9cc6b57f9e9", + "protein_translation": "MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285079" + ], + [ + "gene_synonym", + "ECK3803" + ], + [ + "gene_synonym", + "EcoGene:EG12353" + ], + [ + "gene_synonym", + "GI:94541130" + ], + [ + "gene_synonym", + "GeneID:1450304" + ], + [ + "gene_synonym", + "JW3781" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADN6" + ], + [ + "gene_synonym", + "YP_588473.1" + ], + [ + "gene_synonym", + "b4558" + ], + [ + "gene_synonym", + "yifL" + ] + ], + "dna_sequence": "ATGAAAAACGTGTTTAAGGCACTCACTGTATTACTTACTCTCTTCAGCCTGACGGGCTGCGGTCTGAAAGGTCCGCTCTATTTCCCGCCTGCAGATAAAAACGCACCGCCGCCGACCAAACCGGTAGAGACGCAAACGCAATCCACGGTGCCGGATAAAAACGATCGCGCCACTGGCGATGGTCCATCCCAGGTGAATTACTAA", + "dna_sequence_length": 204, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_3745", + "location": [ + [ + "NC_000913", + 3994522, + "+", + 204 + ] + ], + "md5": "dd6dd9b7e4e5d200f26a59cf589e2b9d", + "parent_gene": "", + "protein_md5": "dc343b156af7733f266206c0e34d4d10", + "protein_translation": "MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTVPDKNDRATGDGPSQVNY", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012442" + ], + [ + "gene_synonym", + "ECK3804" + ], + [ + "gene_synonym", + "EcoGene:EG10209" + ], + [ + "gene_synonym", + "GI:90111650" + ], + [ + "gene_synonym", + "GeneID:948364" + ], + [ + "gene_synonym", + "JW5592" + ], + [ + "gene_synonym", + "NP_418254.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6K1" + ], + [ + "gene_synonym", + "b3809" + ], + [ + "gene_synonym", + "dapF" + ] + ], + "dna_sequence": "ATGCAGTTCTCGAAAATGCATGGCCTTGGCAACGATTTTATGGTCGTCGACGCGGTAACGCAGAATGTCTTTTTTTCACCGGAGCTGATTCGTCGCCTGGCTGATCGGCACCTGGGGGTAGGGTTTGACCAACTGCTGGTGGTTGAGCCGCCGTATGATCCTGAACTGGATTTTCACTATCGCATTTTCAATGCTGATGGCAGTGAAGTGGCGCAGTGCGGCAACGGTGCGCGCTGCTTTGCCCGTTTTGTGCGTCTGAAAGGACTGACCAATAAGCGTGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGA", + "dna_sequence_length": 825, + "functions": [ + "diaminopimelate epimerase" + ], + "id": "CDS_3746", + "location": [ + [ + "NC_000913", + 3994762, + "+", + 825 + ] + ], + "md5": "324fc6fa972cde521c55f16a4e8924d5", + "parent_gene": "", + "protein_md5": "8a2d9e50c5c8f8c6aa8d3d35d6818e19", + "protein_translation": "MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012444" + ], + [ + "gene_synonym", + "ECK3805" + ], + [ + "gene_synonym", + "EcoGene:EG11201" + ], + [ + "gene_synonym", + "GI:16131662" + ], + [ + "gene_synonym", + "GeneID:948359" + ], + [ + "gene_synonym", + "JW3783" + ], + [ + "gene_synonym", + "NP_418255.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23305" + ], + [ + "gene_synonym", + "b3810" + ], + [ + "gene_synonym", + "yigA" + ] + ], + "dna_sequence": "ATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCGGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTAATCATATTCATGTTCTGGAAGAGAACATGGCGCTGTTGATGGAACAGGCTATCGCCAACGAAGGCCTGTTTTATCGCCTACTCTACCTGCAGCGCAGTCTCACCGCCGCCAGCAGTCTCGACGATATGCTGATGCGCTTTCACCGCTGGGCGCGCGATCTCGGCCTGGCAGGTGCGAGTCTGCGCCTGTTTCCGGATCGCTGGCGCTTAGGTGCGCCGTCGAACCACACTCATCTGGCATTAAGCCGTCAGTCTTTCGAACCGCTGCGTATTCAGCGTTTGGGGCAGGAACAGCACTATCTTGGGCCGCTTAACGGACCAGAGCTGCTGGTGGTGCTACCGGAAGCGAAAGCGGTGGGATCGGTGGCGATGTCGATGCTGGGAAGCGATGCTGATTTGGGTGTCGTGCTGTTTACCAGTCGCGATGCCAGTCACTATCAACAAGGGCAAGGAACGCAGTTACTTCATGAAATTGCGCTGATGTTGCCGGAGCTTCTGGAGCGTTGGATTGAACGCGTATGA", + "dna_sequence_length": 708, + "functions": [ + "DUF484 family protein" + ], + "id": "CDS_3747", + "location": [ + [ + "NC_000913", + 3995583, + "+", + 708 + ] + ], + "md5": "3ed62d40d7612d141bf0f71ebd5b5033", + "parent_gene": "", + "protein_md5": "d218bc05c06dbbc0aa77508fc93792a1", + "protein_translation": "MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012448" + ], + [ + "gene_synonym", + "ECK3806" + ], + [ + "gene_synonym", + "EcoGene:EG11069" + ], + [ + "gene_synonym", + "GI:16131663" + ], + [ + "gene_synonym", + "GeneID:948355" + ], + [ + "gene_synonym", + "JW3784" + ], + [ + "gene_synonym", + "NP_418256.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8P6" + ], + [ + "gene_synonym", + "b3811" + ], + [ + "gene_synonym", + "xerC" + ] + ], + "dna_sequence": "ATGACCGATTTACACACCGATGTAGAACGCTACCTACGTTATCTGAGCGTGGAGCGCCAGCTTAGCCCGATAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTTGCTGTACGCAGTCGCCGTAAAGGGCTGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTAACCCGGCGAAAGGTGTTTCGGCACCGAAAGCGCCGCGTCATCTGCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATATTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGAAAGGCAGCAAAGAGCGCCGCCTGCCGATTGGTCGCAACGCTGTGGCGTGGATTGAGCACTGGCTTGATTTGCGCGACCTGTTTGGTAGCGAAGACGACGCGCTTTTTCTGTCGAAACTGGGCAAGCGTATCTCCGCGCGTAATGTGCAGAAACGCTTTGCCGAATGGGGCATAAAACAAGGGCTGAATAATCACGTTCATCCGCATAAATTACGTCACTCGTTCGCCACGCATATGCTGGAGTCGAGCGGCGATCTTCGTGGTGTGCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAA", + "dna_sequence_length": 897, + "functions": [ + "site-specific tyrosine recombinase" + ], + "id": "CDS_3748", + "location": [ + [ + "NC_000913", + 3996287, + "+", + 897 + ] + ], + "md5": "f6011e68172ffd6c6157161114bab5dc", + "parent_gene": "", + "protein_md5": "4b6949c8ccdfec49489082e4f8b4deb1", + "protein_translation": "MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012450" + ], + [ + "gene_synonym", + "ECK3807" + ], + [ + "gene_synonym", + "EcoGene:EG11202" + ], + [ + "gene_synonym", + "GI:16131664" + ], + [ + "gene_synonym", + "GeneID:948357" + ], + [ + "gene_synonym", + "JW3785" + ], + [ + "gene_synonym", + "NP_418257.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADP0" + ], + [ + "gene_synonym", + "b3812" + ], + [ + "gene_synonym", + "yigB" + ] + ], + "dna_sequence": "ATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGCGGTACGGGAAGCGGAACCCGAGATTTATCACGACGTGACGCGCTGGCGTTTTCGTTCGATTGAACAAGCGATGCTCGACGCCGGGCTGAGTGCCGAAGAAGCCAGTGCAGGCGCACACGCAGCAATGATCAACTTTGCCAAATGGCGCAGCCGAATCGACGTCCCGCAGCAAACTCACGACACCTTAAAACAGCTGGCGAAGAAATGGCCGCTGGTGGCGATCACCAACGGTAACGCCCAGCCGGAGCTGTTTGGTTTGGGGGATTATTTTGAGTTTGTGCTGCGCGCTGGCCCGCACGGGCGCTCAAAACCGTTCAGCGATATGTACTTTTTGGCTGCGGAAAAACTCAACGTGCCGATCGGCGAGATCTTACATGTTGGGGACGATCTCACCACTGACGTGGGTGGGGCAATTCGCAGCGGAATGCAGGCTTGTTGGATCAGACCGGAAAATGGCGATCTGATGCAAACCTGGGACAGCCGTTTACTGCCGCATCTGGAAATTTCCCGGTTGGCATCTCTGACCTCGCTGATATAA", + "dna_sequence_length": 717, + "functions": [ + "5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase", + "pyrimidine phosphatase", + "riboflavin synthesis" + ], + "id": "CDS_3749", + "location": [ + [ + "NC_000913", + 3997183, + "+", + 717 + ] + ], + "md5": "287b637dbd50b3c061215af57d692b95", + "parent_gene": "", + "protein_md5": "cd9da0cb6e8b5fa40b63fb915baf0b61", + "protein_translation": "MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012455" + ], + [ + "gene_synonym", + "ECK3808" + ], + [ + "gene_synonym", + "EcoGene:EG11064" + ], + [ + "gene_synonym", + "GI:16131665" + ], + [ + "gene_synonym", + "GeneID:948347" + ], + [ + "gene_synonym", + "JW3786" + ], + [ + "gene_synonym", + "NP_418258.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03018" + ], + [ + "gene_synonym", + "b3813" + ], + [ + "gene_synonym", + "dar-2" + ], + [ + "gene_synonym", + "dda" + ], + [ + "gene_synonym", + "mutU" + ], + [ + "gene_synonym", + "pdeB" + ], + [ + "gene_synonym", + "rad" + ], + [ + "gene_synonym", + "recL" + ], + [ + "gene_synonym", + "srjC" + ], + [ + "gene_synonym", + "uvr502" + ], + [ + "gene_synonym", + "uvrD" + ], + [ + "gene_synonym", + "uvrE" + ] + ], + "dna_sequence": "ATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCGGGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATGGGCACGAGCCAGGGCGGTATGTGGGTCGGCACCTTCCACGGGCTGGCGCACCGTTTGCTGCGTGCGCACCATATGGACGCCAATCTGCCGCAGGATTTCCAGATCCTCGACAGTGAAGACCAGCTACGCCTGCTTAAGCGTCTGATCAAAGCCATGAACCTCGACGAGAAGCAGTGGCCGCCGCGGCAGGCAATGTGGTACATCAACAGCCAGAAAGATGAAGGCCTGCGTCCGCATCATATTCAAAGCTACGGTAATCCGGTGGAGCAGACCTGGCAGAAGGTGTATCAGGCGTATCAGGAAGCGTGTGACCGCGCGGGCCTGGTGGACTTCGCCGAGCTGCTGCTGCGCGCTCACGAGTTGTGGCTTAACAAGCCGCATATCCTGCAACACTACCGCGAACGTTTTACCAATATCCTGGTGGACGAATTCCAGGATACCAACAACATTCAGTACGCGTGGATCCGCCTGCTGGCGGGCGACACCGGCAAAGTGATGATCGTCGGTGATGACGACCAGTCAATCTACGGCTGGCGCGGGGCGCAGGTGGAGAATATTCAGCGTTTCCTTAATGATTTCCCCGGTGCCGAAACTATTCGTCTGGAGCAAAACTACCGCTCTACCAGCAATATTCTGAGCGCCGCTAACGCCCTGATTGAAAACAATAACGGGCGTCTGGGTAAAAAACTGTGGACCGATGGCGCGGACGGTGAGCCTATTTCCCTCTATTGCGCTTTTAACGAACTCGATGAAGCGCGTTTTGTGGTTAACCGCATCAAAACCTGGCAGGACAACGGCGGAGCGCTTGCCGAGTGCGCCATTCTCTACCGCAGCAACGCCCAGTCGCGGGTGCTCGAAGAGGCGTTATTGCAGGCCAGTATGCCGTACCGTATTTACGGCGGGATGCGCTTCTTCGAACGCCAGGAAATCAAAGATGCGCTCTCGTATCTGCGCCTGATTGCCAACCGCAACGACGACGCGGCCTTTGAGCGTGTGGTGAATACGCCAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCAGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACTCGGCGAAAGGCCTGGAGTTCCCGCAGGTGTTTATCGTTGGTATGGAAGAGGGCATGTTCCCAAGCCAGATGTCGCTGGATGAAGGCGGGCGTCTGGAAGAAGAACGCCGTCTGGCCTACGTTGGCGTAACCCGCGCGATGCAGAAACTGACGCTGACCTACGCGGAAACCCGCCGTCTGTATGGTAAAGAGGTTTACCATCGCCCGTCGCGCTTTATCGGCGAGCTGCCGGAAGAGTGTGTGGAAGAGGTGCGCCTGCGCGCCACGGTAAGCCGCCCGGTCAGCCATCAGCGGATGGGTACGCCGATGGTCGAGAACGACAGCGGCTACAAGCTCGGCCAGCGCGTACGCCACGCTAAGTTTGGTGAAGGCACCATTGTCAATATGGAAGGCAGCGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAA", + "dna_sequence_length": 2163, + "functions": [ + "DNA-dependent ATPase I and helicase II" + ], + "id": "CDS_3750", + "location": [ + [ + "NC_000913", + 3997983, + "+", + 2163 + ] + ], + "md5": "39b648355ef39f0aa9ccfc21371f1271", + "parent_gene": "", + "protein_md5": "5564a064c33292c4eecd8a4ca796a715", + "protein_translation": "MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV", + "protein_translation_length": 720, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174110" + ], + [ + "gene_synonym", + "ECK3809" + ], + [ + "gene_synonym", + "EcoGene:EG11462" + ], + [ + "gene_synonym", + "GI:49176417" + ], + [ + "gene_synonym", + "GeneID:2847679" + ], + [ + "gene_synonym", + "JW5591" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27840" + ], + [ + "gene_synonym", + "YP_026261.1" + ], + [ + "gene_synonym", + "b4482" + ], + [ + "gene_synonym", + "yigE" + ] + ], + "dna_sequence": "ATGGCGCATCAGCTACTCATTGGTAAAGGAATGATCACCTTGAATCTCAAACGGATTTTTCTCGCCCTCACCTTACTTCCCTTGTTTGCTGTTGCCGCTGATGATTGCGCACTCTCAGATCCGACGCTGACCGTACAGGCGTATACCGTTAATCCTCAAACAGAGCGGGTGAAAATGTACTGGCAAAAAGCCAATGGCGAAGCGTGGGGAACGTTACATGCTCTGCTGGCGGATATTAATAGTCAGGGTCAGGTGCAGATGGCGATGAACGGCGGCATCTATGATGAAAGCTATGCGCCGCTCGGTTTGTACATCGAAAACGGTCAGCAGAAGGTGGCGTTAAATCTCGCTTCAGGTGAAGGGAATTTCTTTATCCGTCCTGGCGGCGTGTTTTATGTCGCGGGAGATAAAGTCGGCATCGTTCGTCTGGATGCCTTCAAAACCAGTAAAGAGATTCAGTTTGCGGTGCAGTCAGGGCCAATGTTGATGGAAAACGGTGTAATTAATCCGCGTATTCATCCCAACGTCGCCTCAAGCAAAATTCGTAACGGTGTTGGGATTAATAAACATGGGAACGCCGTGTTTTTGTTGAGCCAGCAGGCAACAAATTTTTATGATTTTGCCTGTTATGCCAAAGCGAAACTGAACGTTGAGCAGCTGCTTTATCTTGATGGCACGATTTCACATATGTATATGAAAGGCGGGGCAATCCCGTGGCAACGCTATCCTTTTGTCACCATGATTTCCGTCGAGCGGAAAGGTTAA", + "dna_sequence_length": 765, + "functions": [ + "DUF2233 family protein" + ], + "id": "CDS_3751", + "location": [ + [ + "NC_000913", + 4001056, + "-", + 765 + ] + ], + "md5": "cdd62435d10dc021f8407262887f9bd9", + "parent_gene": "", + "protein_md5": "4f1d2b86593d0827cac0b1892695e408", + "protein_translation": "MAHQLLIGKGMITLNLKRIFLALTLLPLFAVAADDCALSDPTLTVQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLGLYIENGQQKVALNLASGEGNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGPMLMENGVINPRIHPNVASSKIRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012464" + ], + [ + "gene_synonym", + "ECK3810" + ], + [ + "gene_synonym", + "EcoGene:EG11463" + ], + [ + "gene_synonym", + "GI:16131666" + ], + [ + "gene_synonym", + "GeneID:948351" + ], + [ + "gene_synonym", + "JW3789" + ], + [ + "gene_synonym", + "NP_418260.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABI4" + ], + [ + "gene_synonym", + "b3816" + ], + [ + "gene_synonym", + "corA" + ] + ], + "dna_sequence": "ATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGCATCAGGGCGATGAGTACGACGAGGCGCTCTCCACTCTGGCGGAACTGGAAGATATCGGCTGGAAAGTTCGCCTGTGTCTGATGGATACCCAGCGCGCGCTCAACTTCCTGGTGCGTAAAGCGCGTTTACCGGGTGGGCAACTGGAGCAGGCGCGTGAAATCCTGCGAGATATCGAATCCCTGCTGCCGCATAACGAATCCCTGTTCCAGAAGGTGAACTTCCTGATGCAGGCGGCAATGGGTTTTATCAACATCGAGCAGAACCGCATCATCAAAATCTTCTCGGTGGTATCCGTGGTATTCCTGCCGCCGACGCTCGTTGCTTCCAGCTATGGCATGAACTTTGAGTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAA", + "dna_sequence_length": 951, + "functions": [ + "magnesium/nickel/cobalt transporter" + ], + "id": "CDS_3752", + "location": [ + [ + "NC_000913", + 4001426, + "+", + 951 + ] + ], + "md5": "e792f461a68df397429709f3f09d119a", + "parent_gene": "", + "protein_md5": "654589fbd0159975e9024582a2cf47d1", + "protein_translation": "MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQSELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012466" + ], + [ + "gene_synonym", + "ECK3811" + ], + [ + "gene_synonym", + "EcoGene:EG11464" + ], + [ + "gene_synonym", + "GI:16131667" + ], + [ + "gene_synonym", + "GeneID:948340" + ], + [ + "gene_synonym", + "JW3790" + ], + [ + "gene_synonym", + "NP_418261.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27842" + ], + [ + "gene_synonym", + "b3817" + ], + [ + "gene_synonym", + "yigF" + ] + ], + "dna_sequence": "ATGAGTAAGGAATATATGAACGATGGTTCATTAAGTGAAAAATGGAAATACCGATTTAATTTTTATGATCAACATGGTTTTCCTGGATTCTGGGGGGCAACACCAGAATATAAAGCAGCATTTAAAGCATTAAAAGTAAGACAACGCTTAACTATTCAAATGAATTTCATTGCTTTCTTCTGTTCCTGGATATATTTATTTGTCCTGGGGTTATGGAAAAAAGCAATTATAGTTCTATTACTTGGTATTCTATCTCTATTTGTTGGTGCACTAATTGGCGTTAACATTCTGGGAATTGCCGTAGCAGCCTATGTTGCTGTTAACACGAACAAATGGTTCTATGAGAAAGAGGTAAAAGGGTTAAATACCTGGAGCCTTTGA", + "dna_sequence_length": 381, + "functions": [ + "DUF2628 family putative inner membrane protein" + ], + "id": "CDS_3753", + "location": [ + [ + "NC_000913", + 4002799, + "-", + 381 + ] + ], + "md5": "902422327310f749f65ed2a11e56fe88", + "parent_gene": "", + "protein_md5": "00114b18d6a5d476c5945aa918bf782a", + "protein_translation": "MSKEYMNDGSLSEKWKYRFNFYDQHGFPGFWGATPEYKAAFKALKVRQRLTIQMNFIAFFCSWIYLFVLGLWKKAIIVLLLGILSLFVGALIGVNILGIAVAAYVAVNTNKWFYEKEVKGLNTWSL", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012468" + ], + [ + "gene_synonym", + "ECK3812" + ], + [ + "gene_synonym", + "EcoGene:EG11465" + ], + [ + "gene_synonym", + "GI:90111651" + ], + [ + "gene_synonym", + "GeneID:948344" + ], + [ + "gene_synonym", + "JW5590" + ], + [ + "gene_synonym", + "NP_418262.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27843" + ], + [ + "gene_synonym", + "b3818" + ], + [ + "gene_synonym", + "yigG" + ] + ], + "dna_sequence": "ATGTTACGTATATTTATCCCAACATCTAACGGTAAGATTTCCAGACGTCGTTATATATTTTCATTTATTTTAATAAATTTCATTTTTGCCTTTCTTATTATCTTTTTTAACGATGGAGAAGCAGGCTTTCTTGTTATAGTCTCTACCATCGTACTCCATTATCTCGTCATCAACATGAATTGCCAGCGACTCCGTGATAGTGGTTTCATCTATATAAAAACTTATGTTTTTGGTACATTAGCAGTATATATCATCTCTATCATCACAATGATAGCCGAAGATTTTGCCTGTTCAGGCAATGGTTCGATGATTTTTTTGATTTGTTATTTTTCCACTTTCAGTATGCTAATGCTTGCACCTACTGATTCATCAAAACAATAG", + "dna_sequence_length": 381, + "functions": [ + "PRK11371 family inner membrane protein" + ], + "id": "CDS_3754", + "location": [ + [ + "NC_000913", + 4003193, + "-", + 381 + ] + ], + "md5": "6bb5a07cfb6063f71c4cda33d14f8ae3", + "parent_gene": "", + "protein_md5": "931244c0057aac1af18044ca5999bf3a", + "protein_translation": "MLRIFIPTSNGKISRRRYIFSFILINFIFAFLIIFFNDGEAGFLVIVSTIVLHYLVINMNCQRLRDSGFIYIKTYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012472" + ], + [ + "gene_synonym", + "ECK3813" + ], + [ + "gene_synonym", + "EcoGene:EG11466" + ], + [ + "gene_synonym", + "GI:49176418" + ], + [ + "gene_synonym", + "GeneID:948330" + ], + [ + "gene_synonym", + "JW5589" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27844" + ], + [ + "gene_synonym", + "YP_026262.1" + ], + [ + "gene_synonym", + "b3819" + ], + [ + "gene_synonym", + "rarD" + ], + [ + "gene_synonym", + "yigH" + ] + ], + "dna_sequence": "ATGGATGCAAAACAAACGCGGCAGGGCGTATTACTCGCTCTTGCCGCTTATTTTATTTGGGGTATAGCGCCAGCGTACTTCAAGTTGATTTACTACGTGCCCGCCGATGAAATCCTGACGCATCGCGTGATCTGGTCGTTTTTCTTTATGGTGGTGCTGATGAGCATTTGCCGCCAGTGGTCCTATTTAAAAACGCTGATTCAGACGCCACAGAAAATTTTTATGCTGGCAGTCTCTGCCGTGCTGATTGGTGGCAACTGGCTACTGTTTATCTGGGCGGTGAACAATCACCATATGCTGGAAGCGAGCCTTGGTTACTTTATTAACCCGCTGGTGAACATTGTGCTGGGGATGATTTTCCTCGGCGAGCGATTCCGCCGGATGCAATGGCTGGCGGTGATTCTGGCGATATGTGGCGTGTTAGTCCAGCTGTGGACTTTTGGTTCGCTACCTATTATCGCGCTGGGACTGGCATTTAGTTTTGCCTTCTACGGTCTGGTACGCAAGAAGATTGCCGTTGAAGCGCAAACCGGCATGTTAATCGAAACCATGTGGCTGCTGCCCGTGGCGGCAATTTACCTGTTTGCTATTGCCGACAGCTCAACCAGCCATATGGGGCAAAACCCGATGTCGCTGAATTTACTGCTGATCGCCGCCGGTATTGTCACTACCGTACCGCTGTTGTGTTTTACCGCCGCTGCCACGCGCTTGCGTCTCTCAACGTTAGGCTTTTTCCAGTACATTGGCCCGACGCTGATGTTCCTGCTGGCTGTGACGTTTTATGGTGAAAAACCGGGTGCCGATAAGATGGTGACTTTCGCCTTTATTTGGGTGGCGCTGGCAATTTTTGTGATGGATGCGATTTATACGCAGCGTAGAACGTCCAAATAA", + "dna_sequence_length": 891, + "functions": [ + "putative chloramphenical resistance permease" + ], + "id": "CDS_3755", + "location": [ + [ + "NC_000913", + 4004178, + "-", + 891 + ] + ], + "md5": "75df8b825fe94e7107cdc603064b4231", + "parent_gene": "", + "protein_md5": "96b08e8d879df54df1aad668aa3ccad0", + "protein_translation": "MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012474" + ], + [ + "gene_synonym", + "ECK3814" + ], + [ + "gene_synonym", + "EcoGene:EG11467" + ], + [ + "gene_synonym", + "GI:90111652" + ], + [ + "gene_synonym", + "GeneID:948338" + ], + [ + "gene_synonym", + "JW5588" + ], + [ + "gene_synonym", + "NP_418264.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADP2" + ], + [ + "gene_synonym", + "b3820" + ], + [ + "gene_synonym", + "yigI" + ] + ], + "dna_sequence": "ATGTCTGCCGTACTGACCGCTGAACAAGCCCTGAAATTAGTGGGTGAGATGTTTGTTTATCACATGCCATTTAACCGCGCATTGGGGATGGAACTGGAGCGTTACGAAAAAGAGTTCGCACAGCTGGCCTTTAAAAATCAGCCAATGATGGTGGGCAACTGGGCGCAAAGCATTTTGCACGGCGGGGTCATTGCGTCGGCGCTGGATGTCGCCGCCGGTCTGGTGTGCGTGGGAAGTACCTTAACCCGCCACGAAACCATCAGTGAAGATGAACTACGCCAGCGGCTATCGCGGATGGGGACCATTGATCTTCGCGTTGATTATCTGCGCCCAGGCAGGGGCGAGCGTTTTACTGCTACTAGTAGCCTGTTGCGTGCAGGCAATAAAGTCGCCGTCGCCCGCGTTGAATTACACAATGAAGAACAGCTTTATATTGCCAGTGCCACCGCCACCTATATGGTAGGTTGA", + "dna_sequence_length": 468, + "functions": [ + "4HBT thioesterase family protein" + ], + "id": "CDS_3756", + "location": [ + [ + "NC_000913", + 4004697, + "-", + 468 + ] + ], + "md5": "30226e71990e1c174ac068033588e991", + "parent_gene": "", + "protein_md5": "7dd21fe7171c9e259c7ece19b5ba22f4", + "protein_translation": "MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG", + "protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012479" + ], + [ + "gene_synonym", + "ECK3815" + ], + [ + "gene_synonym", + "EcoGene:EG10738" + ], + [ + "gene_synonym", + "GI:16131671" + ], + [ + "gene_synonym", + "GeneID:948307" + ], + [ + "gene_synonym", + "JW3794" + ], + [ + "gene_synonym", + "NP_418265.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A921" + ], + [ + "gene_synonym", + "b3821" + ], + [ + "gene_synonym", + "pldA" + ] + ], + "dna_sequence": "ATGCGGACTCTGCAGGGCTGGTTGTTGCCGGTGTTTATGTTGCCTATGGCAGTATATGCACAAGAGGCAACGGTGAAAGAGGTGCATGACGCGCCAGCGGTGCGTGGCAGTATTATCGCCAATATGCTGCAGGAGCATGACAATCCGTTCACGCTCTATCCTTATGACACCAACTACCTCATTTACACCCAAACCAGCGATCTGAATAAAGAAGCGATTGCCAGTTACGACTGGGCGGAAAATGCGCGTAAGGATGAAGTAAAGTTTCAGTTGAGCCTGGCATTTCCGCTGTGGCGTGGGATTTTAGGCCCGAACTCGGTGTTGGGTGCGTCTTATACGCAAAAATCCTGGTGGCAACTGTCCAATAGCGAAGAGTCTTCACCGTTTCGTGAAACCAACTACGAACCGCAATTGTTCCTCGGTTTTGCCACCGATTACCGTTTTGCAGGTTGGACGCTGCGCGATGTGGAGATGGGGTATAACCACGACTCTAACGGGCGTTCCGACCCGACCTCCCGCAGCTGGAACCGCCTTTATACTCGCCTGATGGCAGAAAACGGTAACTGGCTGGTAGAAGTGAAGCCGTGGTATGTGGTGGGTAATACTGACGATAACCCGGATATCACCAAATATATGGGTTACTACCAGCTTAAAATCGGCTATCACCTCGGTGATGCGGTGCTCAGTGCGAAAGGACAGTACAACTGGAACACCGGCTACGGCGGCGCGGAGTTAGGCTTAAGTTACCCGATCACCAAACATGTGCGCCTTTATACTCAGGTTTACAGCGGCTATGGCGAATCGCTCATCGACTATAACTTCAACCAGACCCGTGTCGGTGTGGGGGTTATGCTAAACGATTTGTTTTGA", + "dna_sequence_length": 870, + "functions": [ + "outer membrane phospholipase A" + ], + "id": "CDS_3757", + "location": [ + [ + "NC_000913", + 4004862, + "+", + 870 + ] + ], + "md5": "da350be5e61e35725cdd8022569f3927", + "parent_gene": "", + "protein_md5": "3fe41c180d748b8b1949d7213bbc728e", + "protein_translation": "MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012483" + ], + [ + "gene_synonym", + "ECK3816" + ], + [ + "gene_synonym", + "EcoGene:EG10833" + ], + [ + "gene_synonym", + "GI:162135918" + ], + [ + "gene_synonym", + "GeneID:948318" + ], + [ + "gene_synonym", + "JW5855" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15043" + ], + [ + "gene_synonym", + "YP_026263.3" + ], + [ + "gene_synonym", + "b3822" + ], + [ + "gene_synonym", + "recQ" + ] + ], + "dna_sequence": "GTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTAAACAGGTTTTACAAGAAACCTTTGGCTACCAACAGTTTCGCCCCGGCCAGGAAGAAATTATCGACACTGTGCTTTCCGGCCGCGATTGCCTCGTCGTCATGCCCACTGGTGGCGGAAAATCCCTTTGCTATCAAATCCCTGCCTTATTGCTAAACGGCCTTACCGTGGTTGTTTCACCGCTGATTTCGTTGATGAAAGATCAGGTGGATCAACTGCAAGCCAACGGCGTGGCGGCGGCGTGCCTTAACTCGACGCAAACCCGCGAACAGCAACTTGAAGTGATGACAGGCTGCCGCACCGGGCAAATTCGTCTGCTTTATATCGCCCCGGAACGCCTGATGCTGGATAACTTTCTTGAGCATCTGGCGCACTGGAATCCGGTGTTATTAGCCGTTGATGAAGCGCACTGTATCTCCCAATGGGGCCACGATTTCCGCCCGGAATATGCCGCGCTCGGTCAGTTGCGCCAGCGGTTCCCGACGCTGCCGTTTATGGCGCTGACCGCCACAGCCGACGACACCACGCGCCAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGACCTGCAAATTGTGGTGGCGACGGTGGCGTTCGGCATGGGCATCAATAAACCAAACGTTCGCTTCGTGGTCCACTTTGATATTCCGCGCAATATCGAATCCTATTATCAGGAAACCGGACGCGCCGGGCGTGATGGCCTGCCCGCGGAAGCGATGCTGTTTTACGATCCGGCTGATATGGCGTGGCTGCGCCGTTGTCTGGAAGAGAAGCCGCAGGGGCAGTTGCAGGATATCGAGCGCCACAAACTCAATGCGATGGGCGCGTTTGCCGAAGCGCAAACTTGCCGTCGTCTGGTATTGCTGAACTATTTTGGCGAAGGGCGTCAGGAGCCGTGCGGGAACTGCGATATCTGCCTCGATCCGCCGAAACAGTACGACGGTTCAACCGATGCTCAGATTGCCCTTTCCACCATTGGTCGTGTGAATCAGCGGTTTGGGATGGGTTATGTGGTGGAAGTGATTCGTGGTGCTAATAACCAGCGTATCCGCGACTATGGTCATGACAAACTGAAAGTCTATGGCATGGGCCGTGATAAAAGCCATGAACATTGGGTGAGCGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTATGATCGCAAACTGTTCGCCAAATTACGCAAACTGCGTAAATCGATAGCCGATGAAAGTAATGTCCCGCCGTACGTGGTGTTTAACGACGCAACCTTGATTGAGATGGCTGAACAGATGCCGATCACCGCCAGCGAAATGCTCAGCGTTAACGGCGTTGGGATGCGCAAGCTGGAACGCTTTGGCAAACCGTTTATGGCGCTGATTCGTGCGCATGTTGATGGCGATGACGAAGAGTAG", + "dna_sequence_length": 1830, + "functions": [ + "ATP-dependent DNA helicase" + ], + "id": "CDS_3758", + "location": [ + [ + "NC_000913", + 4005864, + "+", + 1830 + ] + ], + "md5": "04b5e8b822d0fd79eab8866d1307eb0f", + "parent_gene": "", + "protein_md5": "9c33608832ee7ff8036517b028057c44", + "protein_translation": "MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE", + "protein_translation_length": 609, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012487" + ], + [ + "gene_synonym", + "ECK3817" + ], + [ + "gene_synonym", + "EcoGene:EG11468" + ], + [ + "gene_synonym", + "GI:49176421" + ], + [ + "gene_synonym", + "GeneID:948317" + ], + [ + "gene_synonym", + "JW5586" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG38" + ], + [ + "gene_synonym", + "YP_026264.1" + ], + [ + "gene_synonym", + "b3823" + ], + [ + "gene_synonym", + "rhtC" + ], + [ + "gene_synonym", + "yigJ" + ] + ], + "dna_sequence": "ATGTTGATGTTATTTCTCACCGTCGCCATGGTGCACATTGTGGCGCTTATGAGCCCCGGTCCCGATTTCTTTTTTGTCTCTCAGACCGCTGTCAGTCGTTCCCGTAAAGAAGCGATGATGGGCGTGCTGGGCATTACCTGCGGCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCGAAACGCTGGCGTGGTTTACCGTCGTTGCCAGCCTGTTTGCCCTGCCGCAAATGCGCCGTGGTTATCAACGTCTGGCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGA", + "dna_sequence_length": 621, + "functions": [ + "threonine efflux pump" + ], + "id": "CDS_3759", + "location": [ + [ + "NC_000913", + 4007757, + "+", + 621 + ] + ], + "md5": "35d139b6192a32f384ce2f6b7f2e4e05", + "parent_gene": "", + "protein_md5": "f2045c7b67be2aa5ba327a83262764c1", + "protein_translation": "MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012490" + ], + [ + "gene_synonym", + "ECK3818" + ], + [ + "gene_synonym", + "EcoGene:EG11469" + ], + [ + "gene_synonym", + "GI:49176422" + ], + [ + "gene_synonym", + "GeneID:948316" + ], + [ + "gene_synonym", + "JW5585" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG34" + ], + [ + "gene_synonym", + "YP_026265.1" + ], + [ + "gene_synonym", + "b3824" + ], + [ + "gene_synonym", + "rhtB" + ], + [ + "gene_synonym", + "yigK" + ] + ], + "dna_sequence": "ATGACCTTAGAATGGTGGTTTGCCTACCTGCTGACATCGATCATTTTAAGCCTGTCGCCAGGCTCTGGTGCAATCAACACTATGACCACCTCGCTCAACCACGGTTATCGCGGCGCGGTGGCGTCTATTGCTGGGCTTCAGACCGGACTGGCGATTCATATTGTGCTGGTTGGCGTGGGGTTGGGGACGCTATTTTCCCGCTCAGTGATTGCGTTTGAAGTGTTGAAGTGGGCAGGCGCGGCTTACTTGATTTGGCTGGGAATCCAGCAGTGGCGCGCCGCTGGTGCAATTGACCTTAAATCGCTGGCCTCTACTCAATCGCGTCGACATTTGTTCCAGCGCGCAGTTTTTGTGAATCTCACCAATCCCAAAAGTATTGTGTTTCTGGCGGCGCTATTTCCGCAATTCATCATGCCGCAACAGCCGCAACTGATGCAGTATATCGTGCTCGGCGTCACCACTATTGTGGTCGATATTATTGTGATGATCGGTTACGCCACCCTTGCTCAACGGATTGCTCTATGGATTAAAGGACCAAAGCAGATGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCGAGGCATGCGTGA", + "dna_sequence_length": 621, + "functions": [ + "homoserine, homoserine lactone and S-methyl-methionine efflux pump" + ], + "id": "CDS_3760", + "location": [ + [ + "NC_000913", + 4009059, + "-", + 621 + ] + ], + "md5": "33deb2087c7b78aadddfd89603d984fd", + "parent_gene": "", + "protein_md5": "38795d3facf63047ab028f62d0851ef1", + "protein_translation": "MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012494" + ], + [ + "gene_synonym", + "ECK3819" + ], + [ + "gene_synonym", + "EcoGene:EG10739" + ], + [ + "gene_synonym", + "GI:49176423" + ], + [ + "gene_synonym", + "GeneID:948314" + ], + [ + "gene_synonym", + "JW5584" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07000" + ], + [ + "gene_synonym", + "YP_026266.1" + ], + [ + "gene_synonym", + "b3825" + ], + [ + "gene_synonym", + "pldB" + ] + ], + "dna_sequence": "ATGTTTCAGCAGCAAAAAGACTGGGAAACAAGAGAAAACGCGTTTGCTGCTTTTACCATGGGACCGCTGACTGATTTCTGGCGTCAGCGTGATGAAGCAGAGTTTACTGGTGTGGATGACATTCCGGTGCGCTTTGTCCGTTTTCGCGCACAGCACCATGACCGGGTGGTAGTCATCTGCCCGGGGCGTATTGAGAGCTACGTAAAATATGCGGAACTGGCCTATGACCTGTTCCATTTGGGGTTTGATGTCTTAATCATCGACCATCGCGGGCAGGGACGTTCCGGTCGCCTGTTAGCCGATCCGCATCTCGGGCATGTTAATCGCTTTAATGATTATGTTGATGATCTGGCGGCATTCTGGCAGCAGGAGGTTCAGCCCGGTCCGTGGCGTAAACGCTATATACTGGCACATTCGATGGGCGGTGCGATCTCCACATTATTTCTGCAACGCCATCCAGGTGTATGTGACGCCATTGCGCTAACTGCGCCAATGTTTGGGATCGTGATTCGTATGCCGTCATTTATGGCACGGCAGATCCTCAACTGGGCCGAAGCGCATCCACGTTTCCGTGATGGCTATGCAATAGGCACCGGGCGCTGGCGCGCGTTGCCGTTTGCTATCAACGTACTGACCCACAGCAGACAGCGATATCGACGTAACTTACGCTTCTATGCTGATGACCCAACGATTCGCGTCGGTGGGCCGACCTACCATTGGGTACGCGAAAGTATTCTGGCTGGCGAACAGGTGTTAGCCGGTGCGGGTGATGACGCCACGCCAACGCTTCTCTTGCAGGCTGAAGAGGAACGCGTGGTGGATAACCGCATGCATGACCGTTTTTGTGAACTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAA", + "dna_sequence_length": 1023, + "functions": [ + "lysophospholipase L2" + ], + "id": "CDS_3761", + "location": [ + [ + "NC_000913", + 4009170, + "+", + 1023 + ] + ], + "md5": "e8be626f89824159fd8431d020aa7441", + "parent_gene": "", + "protein_md5": "2ef8dae2082ae3650d2ffd19c7a7060f", + "protein_translation": "MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVRFVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGNRSTEV", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012500" + ], + [ + "gene_synonym", + "ECK3820" + ], + [ + "gene_synonym", + "EcoGene:EG11470" + ], + [ + "gene_synonym", + "GI:49176424" + ], + [ + "gene_synonym", + "GeneID:2847768" + ], + [ + "gene_synonym", + "JW5854" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27848" + ], + [ + "gene_synonym", + "YP_026267.1" + ], + [ + "gene_synonym", + "b3826" + ], + [ + "gene_synonym", + "yigL" + ] + ], + "dna_sequence": "ATGTACCAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAATGGTGCGCGCGTTCACGATCTGGATGGTAATCTGATTTTTGCTCATAACCTGGATCGCGACATTGCCAGCGATCTGTTTGGCGTAGTCAACGACAATCCGGACATCATTACTAACGTTTATCGCGACGACGAATGGTTTATGAATCGCCATCGCCCGGAAGAGATGCGCTTTTTTAAAGAAGCGGTGTTCCAATATGCGCTGTATGAGCCTGGATTACTGGAGCCGGAAGGCGTCAGCAAAGTGTTCTTCACCTGCGATTCCCATGAACAACTGCTGCCGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAA", + "dna_sequence_length": 801, + "functions": [ + "pyridoxal phosphate phosphatase" + ], + "id": "CDS_3762", + "location": [ + [ + "NC_000913", + 4010200, + "+", + 801 + ] + ], + "md5": "dc89a75d9c269c970cd46d6e7c761879", + "parent_gene": "", + "protein_md5": "cfd47bf4d83dd1e7f47a19090b82f4dc", + "protein_translation": "MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS", + "protein_translation_length": 266, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012504" + ], + [ + "gene_synonym", + "ECK3821" + ], + [ + "gene_synonym", + "EcoGene:EG11471" + ], + [ + "gene_synonym", + "GI:16131676" + ], + [ + "gene_synonym", + "GeneID:948309" + ], + [ + "gene_synonym", + "JW3803" + ], + [ + "gene_synonym", + "NP_418271.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADP5" + ], + [ + "gene_synonym", + "b3827" + ], + [ + "gene_synonym", + "yigM" + ] + ], + "dna_sequence": "GTGGCGCTACTTATCATCACCACGATTCTGTGGGCCTTCTCCTTTAGCTTTTATGGCGAGTACCTTGCGGGGCACGTCGATAGCTATTTTGCGGTGCTGGTGCGCGTTGGCCTGGCGGCACTCGTTTTTCTGCCGTTTCTGCGTACCCGTGGCAATAGCCTGAAAACGGTCGGCCTGTATATGCTGGTGGGCGCGATGCAGCTTGGCGTGATGTATATGCTGAGTTTCCGCGCTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTGGCTTGCTGCTGGTGCAACTCTCCAATATCACTTTTGCCATTGGCATGGTGGGTTACAAACGCCTGATGGAAACTCGCCCGATGCCACAGCATAACGCCTTTGCGTGGTTCTATCTTGGCGCGTTTCTGGTGGCAGTGATTGCATGGTTCTTGCTGGGAAATGCGCAGAAAATGCCGCAAACCACGCTGCAATGGGGCATTCTGGTGTTTCTTGGCGTGGTGGCTTCCGGGATTGGCTACTTTATGTGGAACTACGGCGCGACGCAGGTGGACGCCGGAACGCTGGGCATTATGAATAATATGCACGTTCCGGCAGGGCTGCTGGTAAACCTGGCTATCTGGCACCAACAGCCGCACTGGCCAACGTTTATTACAGGCGCGCTGGTGATCCTGGCCTCACTGTGGGTGCATCGTAAGTGGGTCGCTCCGCGCTCTTCACAAACGGCAGATGATCGCAGGCGTGATTGCGCGCTGAGCGAATAA", + "dna_sequence_length": 900, + "functions": [ + "putative inner membrane EamA-like transporter" + ], + "id": "CDS_3763", + "location": [ + [ + "NC_000913", + 4011076, + "+", + 900 + ] + ], + "md5": "280c87bb9f5df2defe7e83911e22a9e6", + "parent_gene": "", + "protein_md5": "a1cf06d9ecab992806eb71f4d1c62d2d", + "protein_translation": "MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012506" + ], + [ + "gene_synonym", + "ECK3822" + ], + [ + "gene_synonym", + "EcoGene:EG10591" + ], + [ + "gene_synonym", + "GI:16131677" + ], + [ + "gene_synonym", + "GeneID:948310" + ], + [ + "gene_synonym", + "JW3804" + ], + [ + "gene_synonym", + "NP_418272.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9F9" + ], + [ + "gene_synonym", + "b3828" + ], + [ + "gene_synonym", + "metR" + ] + ], + "dna_sequence": "ATGATCGAAGTAAAACACCTGAAAACGCTACAAGCGTTGCGGAACTGCGGCTCGCTCGCAGCCGCTGCGGCGACGTTGCATCAGACGCAATCCGCCCTGTCTCACCAGTTTAGCGATCTGGAACAACGCCTTGGCTTCCGGCTATTTGTGCGTAAGAGCCAGCCGCTACGCTTTACACCGCAGGGAGAAATCCTGTTGCAACTGGCAAACCAGGTACTGCCGCAAATTAGCCAGGCCCTGCAAGCCTGCAATGAACCGCAGCAGACGCGTCTGCGCATTGCCATTGAGTGCCATAGCTGTATTCAGTGGCTGACACCCGCGTTAGAAAATTTCCATAAGAACTGGCCGCAGGTAGAGATGGATTTTAAATCGGGCGTGACATTTGACCCGCAGCCCGCCTTGCAACAGGGAGAGCTGGATCTGGTAATGACGTCCGATATTCTGCCGCGCAGTGGCCTGCATTATTCGCCGATGTTCGACTATGAAGTGCGTCTGGTGTTAGCACCTGACCATCCACTGGCGGCGAAAACGCGAATTACACCGGAAGATCTCGCCAGCGAGACGCTATTAATTTATCCGGTGCAGCGTAGTCGACTGGATGTCTGGCGGCATTTTCTTCAGCCGGCAGGCGTCAGCCCGTCACTGAAAAGCGTCGATAACACCTTATTGTTGATTCAGATGGTTGCCGCGCGGATGGGTATTGCCGCGCTACCGCATTGGGTAGTAGAGAGTTTTGAGCGCCAGGGTCTGGTGGTGACCAAAACCCTGGGCGAAGGCTTGTGGAGCCGACTGTACGCCGCCGTGCGCGATGGCGAGCAGCGTCAGCCAGTTACGGAAGCGTTTATTCGCTCAGCGCGCAATCACGCCTGCGATCATCTGCCGTTTGTGAAGAGCGCGGAGCGACCCACTTACGATGCACCCACAGTGAGGCCAGGATCACCAGCGCGCCTGTAA", + "dna_sequence_length": 954, + "functions": [ + "methionine biosynthesis regulon transcriptional regulator" + ], + "id": "CDS_3764", + "location": [ + [ + "NC_000913", + 4012816, + "-", + 954 + ] + ], + "md5": "ff4e7d25257a7363da01dd018013a224", + "parent_gene": "", + "protein_md5": "67d8c6fb034ee63a05d25161df201b8a", + "protein_translation": "MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012520" + ], + [ + "gene_synonym", + "ECK3823" + ], + [ + "gene_synonym", + "EcoGene:EG10584" + ], + [ + "gene_synonym", + "GI:16131678" + ], + [ + "gene_synonym", + "GeneID:948323" + ], + [ + "gene_synonym", + "JW3805" + ], + [ + "gene_synonym", + "NP_418273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25665" + ], + [ + "gene_synonym", + "b3829" + ], + [ + "gene_synonym", + "metB12" + ], + [ + "gene_synonym", + "metE" + ] + ], + "dna_sequence": "ATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGTTGGCCTGCGTCGCGAGCTGAAAAAAGCGCAAGAAAGTTATTGGGCGGGGAACTCCACGCGTGAAGAACTGCTGGCGGTAGGGCGTGAATTGCGTGCTCGTCACTGGGATCAACAAAAGCAAGCGGGTATCGACCTGCTGCCGGTGGGCGATTTTGCCTGGTACGATCATGTACTGACCACCAGTCTGCTGCTGGGTAACGTTCCGGCGCGTCATCAGAACAAAGATGGTTCGGTAGATATCGACACCCTGTTCCGTATTGGTCGTGGACGTGCGCCGACTGGCGAACCTGCGGCGGCAGCGGAAATGACCAAATGGTTTAACACCAACTATCACTACATGGTGCCGGAGTTCGTTAAAGGCCAACAGTTCAAACTGACCTGGACGCAGCTGCTGGACGAAGTGGACGAGGCGCTGGCGCTGGGCCACAAGGTGAAACCTGTGCTGCTGGGGCCGGTTACCTGGCTGTGGCTGGGGAAAGTGAAAGGTGAACAATTTGACCGCCTGAGCCTGCTGAACGACATTCTGCCGGTTTATCAGCAAGTGCTGGCAGAACTGGCGAAACGCGGCATCGAGTGGGTACAGATTGATGAACCCGCGCTGGTACTGGAACTACCACAGGCGTGGCTGGACGCATACAAACCCGCTTACGACGCGCTCCAGGGACAGGTGAAACTGCTGCTGACCACCTATTTTGAAGGCGTAACGCCAAATCTCGACACGATTACTGCGCTGCCTGTTCAGGGTCTGCATGTTGACCTCGTACATGGTAAAGATGACGTTGCTGAACTGCACAAGCGCCTGCCTTCTGACTGGTTGCTGTCTGCGGGTCTGATCAATGGTCGTAACGTCTGGCGCGCCGATCTTACCGAGAAATATGCGCAAATTAAGGACATTGTCGGCAAACGTGATTTGTGGGTGGCATCTTCCTGCTCGTTGCTGCACAGCCCCATCGACCTGAGCGTGGAAACGCGTCTTGATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCACCGCCCAGGACAGCCAGCGTGCGAATGTCTATGAAGTGCGTGCTGAAGCCCAGCGTGCGCGTTTTAAACTGCCAGCGTGGCCGACCACCACGATTGGTTCCTTCCCGCAAACCACGGAAATTCGTACCCTGCGTCTGGATTTCAAAAAGGGCAATCTCGACGCCAACAACTACCGCACGGGCATTGCGGAACATATCAAGCAGGCCATTGTTGAGCAGGAACGTTTGGGACTGGATGTGCTGGTACATGGCGAGGCCGAGCGTAATGACATGGTGGAATACTTTGGCGAGCACCTCGACGGATTTGTCTTTACGCAAAACGGTTGGGTACAGAGCTACGGTTCCCGCTGCGTGAAGCCACCGATTGTCATTGGTGACATTAGCCGCCCGGCACCGATTACCGTGGAGTGGGCGAAGTATGCGCAATCGCTGACCGACAAACCGGTGAAAGGGATGCTGACGGGGCCGGTGACCATACTCTGCTGGTCGTTCCCGCGTGAAGATGTCAGCCGTGAAACCATCGCCAAACAGATTGCGCTGGCGCTGCGTGATGAAGTGGCCGATCTGGAAGCCGCTGGAATTGGCATCATCCAGATTGACGAACCGGCGCTGCGCGAAGGTTTACCGCTGCGTCGTAGCGACTGGGATGCGTATCTCCAGTGGGGCGTAGAGGCCTTCCGTATCAACGCCGCCGTGGCGAAAGATGACACACAAATCCACACTCACATGTGTTATTGCGAGTTCAACGACATCATGGATTCGATTGCGGCGCTGGACGCAGACGTCATCACCATCGAAACCTCGCGTTCCGACATGGAGTTGCTGGAGTCGTTTGAAGAGTTTGATTATCCAAATGAAATCGGTCCTGGCGTCTATGACATTCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA", + "dna_sequence_length": 2262, + "functions": [ + "5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase" + ], + "id": "CDS_3765", + "location": [ + [ + "NC_000913", + 4013053, + "+", + 2262 + ] + ], + "md5": "48274821c2c632962e36b5bf28ab5d91", + "parent_gene": "", + "protein_md5": "eaaada09fde0a46f85958c91e4029379", + "protein_translation": "MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012522" + ], + [ + "gene_synonym", + "ECK3824" + ], + [ + "gene_synonym", + "EcoGene:EG14321" + ], + [ + "gene_synonym", + "GI:49176425" + ], + [ + "gene_synonym", + "GeneID:948320" + ], + [ + "gene_synonym", + "JW5853" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P56262" + ], + [ + "gene_synonym", + "YP_026268.1" + ], + [ + "gene_synonym", + "b3830" + ], + [ + "gene_synonym", + "ysgA" + ] + ], + "dna_sequence": "ATGGCAACAACACAACAATCTGGATTTGCACCTGCTGCATCGCCTCTCGCTTCGACCATCGTTCAGACCCCGGACGACGCGATTGTGGCGGGCTTCACCTCTATCCCTTCACAAGGGGATAACATGCCTGCTTACCATGCCAGACCAAAGCAAAGCGATGGCCCACTGCCAGTGGTCATTGTAGTGCAGGAAATTTTTGGCGTGCATGAACATATCCGCGACATTTGTCGCCGTCTGGCGCTGGAGGGGTATCTGGCTATCGCACCTGAACTTTACTTCCGCGAAGGCGATCCGAATGATTTTGCCGATATCCCCACGTTGCTTAGCGGTCTGGTAGCAAAAGTGCCTGACTCGCAGGTGCTGGCCGATCTCGATCATGTCGCCAGTTGGGCTTCCCGCAACGGCGGCGATGTTCATCGTTTAATGATCACCGGATTCTGCTGGGGTGGACGTATCACCTGGCTGTATGCCGCGCATAATCCACAGCTAAAAGCCGCAGTGGCGTGGTACGGCAAACTGACGGGCGACAAGTCGCTGAATTCACCGAAACAACCTGTTGATATCGCAACCGATCTTAACGCGCCGATTCTCGGCTTATATGGTGGTCAGGATAACAGCATTCCGCAGGAGAGCGTTGAAACCATGCGCCAGGCGCTGCGGGCTGCTAATGCGAAAGCAGAGATTATCGTGTACCCGGACGCCGGGCATGCATTCAACGCTGATTATCGCCCGAGCTATCATGCCGCATCTGCAGAAGATGGCTGGCAGCGTATGCTGGAATGGTTTAAGCAGTATGGTGGGAAGAAGTCGCTGTAA", + "dna_sequence_length": 816, + "functions": [ + "putative carboxymethylenebutenolidase" + ], + "id": "CDS_3766", + "location": [ + [ + "NC_000913", + 4016169, + "-", + 816 + ] + ], + "md5": "b32b20875968cad010e5288c43c61e5b", + "parent_gene": "", + "protein_md5": "a7f8251c9e08cd2a2cd8cfd2e14c8b24", + "protein_translation": "MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQYGGKKSL", + "protein_translation_length": 271, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012528" + ], + [ + "gene_synonym", + "ECK3825" + ], + [ + "gene_synonym", + "EcoGene:EG11045" + ], + [ + "gene_synonym", + "GI:16131680" + ], + [ + "gene_synonym", + "GeneID:948987" + ], + [ + "gene_synonym", + "JW3808" + ], + [ + "gene_synonym", + "NP_418275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12758" + ], + [ + "gene_synonym", + "b3831" + ], + [ + "gene_synonym", + "udp" + ] + ], + "dna_sequence": "ATGTCCAAGTCTGATGTTTTTCATCTCGGCCTCACTAAAAACGATTTACAAGGGGCTACGCTTGCCATCGTCCCTGGCGACCCGGATCGTGTGGAAAAGATCGCCGCGCTGATGGATAAGCCGGTTAAGCTGGCATCTCACCGCGAATTCACTACCTGGCGTGCAGAGCTGGATGGTAAACCTGTTATCGTCTGCTCTACCGGTATCGGCGGCCCGTCTACCTCTATTGCTGTTGAAGAGCTGGCACAGCTGGGCATTCGCACCTTCCTGCGTATCGGTACAACGGGCGCTATTCAGCCGCATATTAATGTGGGTGATGTCCTGGTTACCACGGCGTCTGTCCGTCTGGATGGCGCGAGCCTGCACTTCGCACCGCTGGAATTCCCGGCTGTCGCTGATTTCGAATGTACGACTGCGCTGGTTGAAGCTGCGAAATCCATTGGCGCGACAACTCACGTTGGCGTGACAGCTTCTTCTGATACCTTCTACCCAGGTCAGGAACGTTACGATACTTACTCTGGTCGCGTAGTTCGTCACTTTAAAGGTTCTATGGAAGAGTGGCAGGCGATGGGCGTAATGAACTATGAAATGGAATCTGCAACCCTGCTGACCATGTGTGCAAGTCAGGGCCTGCGTGCCGGTATGGTAGCGGGTGTTATCGTTAACCGCACCCAGCAAGAGATCCCGAATGCTGAGACGATGAAACAAACCGAAAGCCATGCGGTGAAAATCGTGGTGGAAGCGGCGCGTCGTCTGCTGTAA", + "dna_sequence_length": 762, + "functions": [ + "uridine phosphorylase" + ], + "id": "CDS_3767", + "location": [ + [ + "NC_000913", + 4016431, + "+", + 762 + ] + ], + "md5": "5e442272df704d6c108067b5aabcd703", + "parent_gene": "", + "protein_md5": "ab622b9a421a3a5925feff745ba0d578", + "protein_translation": "MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKLASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012531" + ], + [ + "gene_synonym", + "ECK3826" + ], + [ + "gene_synonym", + "EcoGene:EG11472" + ], + [ + "gene_synonym", + "GI:16131681" + ], + [ + "gene_synonym", + "GeneID:948966" + ], + [ + "gene_synonym", + "JW3809" + ], + [ + "gene_synonym", + "NP_418276.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG71" + ], + [ + "gene_synonym", + "b3832" + ], + [ + "gene_synonym", + "dinK" + ], + [ + "gene_synonym", + "rmuC" + ], + [ + "gene_synonym", + "sosB" + ], + [ + "gene_synonym", + "yigN" + ] + ], + "dna_sequence": "GTGGATTTCTCAATCATGGTTTACGCAGTTATTGCGTTGGTGGGTGTGGCAATTGGCTGGCTGTTTGCCAGTTATCAACATGCGCAGCAAAAAGCCGAGCAATTAGCTGAACGTGAAGAGATGGTCGCGGAGTTAAGCGCGGCAAAACAACAAATTACCCAAAGCGAGCACTGGCGTGCAGAGTGCGAGTTACTCAATAACGAAGTGCGCAGCCTGCAAAGTATTAACACCTCTCTGGAGGCCGATCTGCGTGAAGTAACCACGCGGATGGAAGCCGCACAGCAACATGCTGACGATAAAATTCGCCAGATGATTAACAGCGAGCAGCGCCTCAGTGAGCAGTTTGAAAACCTCGCCAACCGTATTTTTGAGCACAGCAATCGCCGGGTTGATGAGCAAAACCGTCAGAGTCTGAACAGCCTGTTGTCGCCGCTACGTGAACAACTGGACGGTTTCCGCCGTCAGGTTCAGGACAGCTTCGGTAAAGAAGCACAAGAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCAGCATCGAAAATGACGCCCGCTCGCGGATGCAGCCGGATGTCATCGTGCGCCTGCCGCAGGGAAAAGATGTGGTGATCGACGCCAAAATGACGCTGGTCGCCTATGAACGCTATTTTAACGCCGAAGACGACTACACCCGCGAAAGCGCGCTACAGGAACATATCGCGTCGGTGCGTAACCATATCCGTTTGCTGGGACGCAAAGATTATCAACAGCTGCCGGGGCTGCGAACTCTGGATTACGTGCTGATGTTTATTCCCGTTGAACCCGCTTTTTTACTGGCGCTTGACCGCCAGCCGGAGCTGATCACCGAAGCGTTGAAAAACAACATCATGCTGGTTAGCCCGACTACGCTGCTGGTGGCGCTGCGCACTATCGCCAACCTGTGGCGTTATGAGCATCAAAGCCGCAACGCCCAGCAAATCGCCGATCGTGCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAG", + "dna_sequence_length": 1428, + "functions": [ + "DNA recombination protein" + ], + "id": "CDS_3768", + "location": [ + [ + "NC_000913", + 4017333, + "+", + 1428 + ] + ], + "md5": "f6a469ce4a2601bb29c1f135ea817718", + "parent_gene": "", + "protein_md5": "749a2ab6bf6ff9e4c701f8a100280e92", + "protein_translation": "MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR", + "protein_translation_length": 475, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012534" + ], + [ + "gene_synonym", + "ECK3827" + ], + [ + "gene_synonym", + "EcoGene:EG11473" + ], + [ + "gene_synonym", + "GI:49176426" + ], + [ + "gene_synonym", + "GeneID:948926" + ], + [ + "gene_synonym", + "JW5581" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A887" + ], + [ + "gene_synonym", + "YP_026269.1" + ], + [ + "gene_synonym", + "b3833" + ], + [ + "gene_synonym", + "menG" + ], + [ + "gene_synonym", + "menH" + ], + [ + "gene_synonym", + "ubiE" + ], + [ + "gene_synonym", + "yigO" + ] + ], + "dna_sequence": "ATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAATGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAACACCTTTGATTGCATCACCATTTCGTTTGGTCTGCGTAACGTCACCGACAAAGATAAAGCACTGCGTTCAATGTATCGCGTGCTGAAACCCGGCGGCCGCCTGCTGGTGCTTGAGTTCTCGAAGCCAATTATCGAGCCGCTGAGCAAAGCCTATGATGCATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGA", + "dna_sequence_length": 756, + "functions": [ + "bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase" + ], + "id": "CDS_3769", + "location": [ + [ + "NC_000913", + 4018855, + "+", + 756 + ] + ], + "md5": "a34533f2d661ffec6b1a9df678f949be", + "parent_gene": "", + "protein_md5": "2689b905d6a0de9bb235c08cee857bf8", + "protein_translation": "MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012536" + ], + [ + "gene_synonym", + "ECK3828" + ], + [ + "gene_synonym", + "EcoGene:EG11474" + ], + [ + "gene_synonym", + "GI:16131683" + ], + [ + "gene_synonym", + "GeneID:948915" + ], + [ + "gene_synonym", + "JW3811" + ], + [ + "gene_synonym", + "NP_418278.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADP7" + ], + [ + "gene_synonym", + "b3834" + ], + [ + "gene_synonym", + "ubiJ" + ], + [ + "gene_synonym", + "yigP" + ] + ], + "dna_sequence": "ATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTATTGCGCGTGGAGGTAAAAGGCTTTTCGACGTCATTGATTCTGGTGTTCAGCGAACGCCAGGTTGATGTACTGGGCGAATGGGCAGGCGATGCTGACTGCACCGTTATCGCCTACGCCAGTGTGTTGCCGAAACTTCGCGATCGCCAGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCATCACGGCATTAAGCGCCAGCAACGTTATGTGGCGGAAGCCATTACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGA", + "dna_sequence_length": 606, + "functions": [ + "aerobic ubiquinone synthesis protein, SCP2 family protein" + ], + "id": "CDS_3770", + "location": [ + [ + "NC_000913", + 4019624, + "+", + 606 + ] + ], + "md5": "01c5529172d70cce985c902d94a52062", + "parent_gene": "", + "protein_md5": "8f5dbbc9c3b11a9b12031fee80283b10", + "protein_translation": "MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDIQVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012539" + ], + [ + "gene_synonym", + "ECK3829" + ], + [ + "gene_synonym", + "EcoGene:EG11476" + ], + [ + "gene_synonym", + "GI:16131684" + ], + [ + "gene_synonym", + "GeneID:948322" + ], + [ + "gene_synonym", + "JW3812" + ], + [ + "gene_synonym", + "NP_418279.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6A0" + ], + [ + "gene_synonym", + "aarF" + ], + [ + "gene_synonym", + "b3835" + ], + [ + "gene_synonym", + "ubiB" + ], + [ + "gene_synonym", + "yigQ" + ], + [ + "gene_synonym", + "yigR" + ], + [ + "gene_synonym", + "yigS" + ] + ], + "dna_sequence": "ATGACGCCAGGTGAAGTACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACAAACTTTTAGGTGAGCGACTACGACTGGCCCTGCAAGAACTGGGGCCGGTTTGGATCAAGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGCTGGCGAAGCAGCAGATTGAAGCTGCAATGGGCGGCTTGCCGGTAGAAGCGTGGTTTGACGATTTTGAAATCAAGCCGCTGGCTTCTGCTTCTATCGCCCAGGTTCATACCGCGCGATTGAAATCGAATGGTAAAGAGGTGGTGATTAAAGTCATCCGCCCGGATATTTTGCCGGTTATTAAAGCGGATCTGAAACTTATCTACCGTCTGGCTCGCTGGGTGCCGCGTTTGCTGCCGGATGGTCGCCGTCTGCGCCCAACCGAAGTGGTGCGCGAGTACGAAAAGACATTGATTGATGAACTGAATTTGCTGCGGGAATCTGCCAACGCCATTCAGCTTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACTCAGGTCTTTCGCGACAGCTTTTTCCATGCCGATATGCACCCTGGCAACATCTTCGTAAGCTATGAACACCCGGAAAACCCGAAATATATCGGCATTGATTGCGGGATTGTTGGCTCGCTAAACAAAGAAGATAAACGCTATCTGGCAGAAAACTTTATCGCCTTCTTTAATCGCGACTATCGCAAAGTGGCAGAGCTACACGTCGATTCTGGCTGGGTGCCACCAGATACCAACGTTGAAGAGTTCGAATTTGCCATTCGTACGGTCTGTGAACCTATCTTTGAGAAACCGCTGGCCGAAATTTCGTTTGGACATGTACTGTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCACAGTGTTGATAAGATTGCCCGCGAGCTTCAGTCAAATCATGTACGTCAGGGACAATCGCGTTATTTTCTCGGAATTGGCGCTACGTTAGTATTAAGTGGCACATTCTTGTTGGTCAGCCGACCTGAATGGGGGCTGATGCCCGGCTGGTTAATGGCAGGTGGTCTGATCGCCTGGTTTGTCGGTTGGCGCAAAACACGCTGA", + "dna_sequence_length": 1641, + "functions": [ + "regulator of octaprenylphenol hydroxylation, ubiquinone synthesis", + "regulator of 2'-N-acetyltransferase", + "putative ABC1 family protein kinase" + ], + "id": "CDS_3771", + "location": [ + [ + "NC_000913", + 4020226, + "+", + 1641 + ] + ], + "md5": "f3d50491c05bd1f5ea36e92cb36e50f1", + "parent_gene": "", + "protein_md5": "6e9a9329195f38a369342462144b9103", + "protein_translation": "MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR", + "protein_translation_length": 546, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012541" + ], + [ + "gene_synonym", + "ECK3830" + ], + [ + "gene_synonym", + "EcoGene:EG11478" + ], + [ + "gene_synonym", + "GI:90111653" + ], + [ + "gene_synonym", + "GeneID:948321" + ], + [ + "gene_synonym", + "JW3813" + ], + [ + "gene_synonym", + "NP_418280.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69428" + ], + [ + "gene_synonym", + "b3836" + ], + [ + "gene_synonym", + "mttA1" + ], + [ + "gene_synonym", + "tatA" + ], + [ + "gene_synonym", + "yigT" + ] + ], + "dna_sequence": "ATGGGTGGTATCAGTATTTGGCAGTTATTGATTATTGCCGTCATCGTTGTACTGCTTTTTGGCACCAAAAAGCTCGGCTCCATCGGTTCCGATCTTGGTGCGTCGATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTACTGCGAAAACTATCGCCGATAAGCAGGCGGATACGAATCAGGAACAGGCTAAAACAGAAGACGCGAAGCGCCACGATAAAGAGCAGGTGTAA", + "dna_sequence_length": 270, + "functions": [ + "TatABCE protein translocation system subunit" + ], + "id": "CDS_3772", + "location": [ + [ + "NC_000913", + 4021945, + "+", + 270 + ] + ], + "md5": "c44c2f8aaba3971a6de1a896051483cb", + "parent_gene": "", + "protein_md5": "ac2c9754009c0175b55045aa01e09970", + "protein_translation": "MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012545" + ], + [ + "gene_synonym", + "ECK3831" + ], + [ + "gene_synonym", + "EcoGene:EG14322" + ], + [ + "gene_synonym", + "GI:49176428" + ], + [ + "gene_synonym", + "GeneID:948319" + ], + [ + "gene_synonym", + "JW5580" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69425" + ], + [ + "gene_synonym", + "YP_026270.1" + ], + [ + "gene_synonym", + "b3838" + ], + [ + "gene_synonym", + "mttA2" + ], + [ + "gene_synonym", + "tatB" + ], + [ + "gene_synonym", + "ysgB" + ] + ], + "dna_sequence": "GTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCGTTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACGGTGCAGAACGAACTGACCCAGGAGTTAAAACTCCAGGAGTTTCAGGACAGTCTGAAAAAGGTTGAAAAGGCGAGCCTCACTAACCTGACGCCCGAACTGAAAGCGTCGATGGATGAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGGCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATAAACCGTAA", + "dna_sequence_length": 516, + "functions": [ + "TatABCE protein translocation system subunit" + ], + "id": "CDS_3773", + "location": [ + [ + "NC_000913", + 4022218, + "+", + 516 + ] + ], + "md5": "bc9846e491817561f35a9b488b3ed3bf", + "parent_gene": "", + "protein_md5": "ad6fe68d5b34d08fd56a94be408e0e64", + "protein_translation": "MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012547" + ], + [ + "gene_synonym", + "ECK3832" + ], + [ + "gene_synonym", + "EcoGene:EG11479" + ], + [ + "gene_synonym", + "GI:16131687" + ], + [ + "gene_synonym", + "GeneID:948328" + ], + [ + "gene_synonym", + "JW3815" + ], + [ + "gene_synonym", + "NP_418282.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69423" + ], + [ + "gene_synonym", + "b3839" + ], + [ + "gene_synonym", + "mttB" + ], + [ + "gene_synonym", + "tatC" + ], + [ + "gene_synonym", + "yigU" + ], + [ + "gene_synonym", + "yigV" + ] + ], + "dna_sequence": "ATGTCTGTAGAAGATACTCAACCGCTTATCACGCATCTGATTGAGCTGCGTAAGCGTCTGCTGAACTGCATTATCGCGGTGATCGTGATATTCCTGTGTCTGGTCTATTTCGCCAATGACATCTATCACCTGGTATCCGCGCCATTGATCAAGCAGTTGCCGCAAGGTTCAACGATGATCGCCACCGACGTGGCCTCGCCGTTCTTTACGCCGATCAAGCTGACCTTTATGGTGTCGCTGATTCTGTCAGCGCCGGTGATTCTCTATCAGGTGTGGGCATTTATCGCCCCAGCGCTGTATAAGCATGAACGTCGCCTGGTGGTGCCGCTGCTGGTTTCCAGCTCTCTGCTGTTTTATATCGGCATGGCATTCGCCTACTTTGTGGTCTTTCCGCTGGCATTTGGCTTCCTTGCCAATACCGCGCCGGAAGGGGTGCAGGTATCCACCGACATCGCCAGCTATTTAAGCTTCGTTATGGCGCTGTTTATGGCGTTTGGTGTCTCCTTTGAAGTGCCGGTAGCAATTGTGCTGCTGTGCTGGATGGGGATTACCTCGCCAGAAGACTTACGCAAAAAACGCCCGTATGTGCTGGTTGGTGCATTCGTTGTCGGGATGTTGCTGACGCCGCCGGATGTCTTCTCGCAAACGCTGTTGGCGATCCCGATGTACTGTCTGTTTGAAATCGGTGTCTTCTTCTCACGCTTTTACGTTGGTAAAGGGCGAAATCGGGAAGAGGAAAACGACGCTGAAGCAGAAAGCGAAAAAACTGAAGAATAA", + "dna_sequence_length": 777, + "functions": [ + "TatABCE protein translocation system subunit" + ], + "id": "CDS_3774", + "location": [ + [ + "NC_000913", + 4022736, + "+", + 777 + ] + ], + "md5": "3b60bb2f7cd03ea1d44de2737b55686e", + "parent_gene": "", + "protein_md5": "d13b96f277bdc0e5fde0c1cb180b1c95", + "protein_translation": "MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174116" + ], + [ + "gene_synonym", + "ECK3833" + ], + [ + "gene_synonym", + "EcoGene:EG11481" + ], + [ + "gene_synonym", + "GI:49176429" + ], + [ + "gene_synonym", + "GeneID:2847752" + ], + [ + "gene_synonym", + "JW5931" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27859" + ], + [ + "gene_synonym", + "YP_026271.1" + ], + [ + "gene_synonym", + "b4483" + ], + [ + "gene_synonym", + "mttC" + ], + [ + "gene_synonym", + "tatD" + ], + [ + "gene_synonym", + "yigW" + ], + [ + "gene_synonym", + "yigX" + ] + ], + "dna_sequence": "ATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGACTGAAGAAGCGATTATTGAGCTGGCCGCGCAGCCAGAAGTGGTGGCGATTGGTGAATGTGGTCTCGACTTTAACCGCAACTTTTCGACGCCGGAAGAGCAGGAACGCGCTTTTGTTGCCCAGCTACGCATTGCCGCAGATTTAAACATGCCGGTATTTATGCACTGTCGCGATGCCCACGAGCGGTTTATGACATTGCTGGAGCCGTGGCTGGATAAACTGCCTGGTGCGGTTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATCTCACGCCAAAGCCATCATCCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAG", + "dna_sequence_length": 783, + "functions": [ + "quality control of Tat-exported FeS proteins", + "Mg-dependent cytoplasmic DNase" + ], + "id": "CDS_3775", + "location": [ + [ + "NC_000913", + 4023554, + "+", + 783 + ] + ], + "md5": "fa27e9d33537d18b9f48d2f11bbb471e", + "parent_gene": "", + "protein_md5": "bc62515b3acdc2240a05383f5c222af8", + "protein_translation": "MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012553" + ], + [ + "gene_synonym", + "ECK3834" + ], + [ + "gene_synonym", + "EcoGene:EG10839" + ], + [ + "gene_synonym", + "GI:16131688" + ], + [ + "gene_synonym", + "GeneID:948327" + ], + [ + "gene_synonym", + "JW3818" + ], + [ + "gene_synonym", + "NP_418284.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFW0" + ], + [ + "gene_synonym", + "b3842" + ], + [ + "gene_synonym", + "hlyT" + ], + [ + "gene_synonym", + "rfaH" + ], + [ + "gene_synonym", + "sfrB" + ] + ], + "dna_sequence": "ATGCAATCCTGGTATTTACTGTACTGCAAGCGCGGGCAACTTCAACGTGCCCAGGAACACCTCGAAAGACAGGCTGTGAATTGCCTGGCACCGATGATCACCCTGGAAAAAATCGTGCGTGGAAAACGTACTGCAGTCAGTGAGCCATTGTTCCCCAACTACCTGTTTGTGGAATTTGACCCAGAAGTGATTCATACCACGACTATCAACGCGACCCGCGGTGTCAGCCACTTCGTGCGCTTTGGCGCGTCGCCAGCGATAGTCCCATCGGCGGTTATTCATCAGCTATCGGTATATAAACCGAAAGACATTGTCGATCCGGCAACCCCTTATCCGGGTGATAAGGTGATTATTACCGAAGGCGCGTTCGAAGGCTTTCAGGCCATTTTCACCGAACCCGATGGTGAGGCTCGCTCCATGCTATTGCTTAATCTTATTAATAAAGAGATTAAGCACAGTGTGAAGAATACCGAGTTCCGCAAACTCTAA", + "dna_sequence_length": 489, + "functions": [ + "transcription antitermination protein" + ], + "id": "CDS_3776", + "location": [ + [ + "NC_000913", + 4024821, + "-", + 489 + ] + ], + "md5": "0262aa260fa23965ed0595c6d7e9ce9c", + "parent_gene": "", + "protein_md5": "715f6a36cd2c3556526a6e82f0038c29", + "protein_translation": "MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012557" + ], + [ + "gene_synonym", + "ECK3835" + ], + [ + "gene_synonym", + "EcoGene:EG11396" + ], + [ + "gene_synonym", + "GI:16131689" + ], + [ + "gene_synonym", + "GeneID:948326" + ], + [ + "gene_synonym", + "JW3819" + ], + [ + "gene_synonym", + "NP_418285.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAB4" + ], + [ + "gene_synonym", + "b3843" + ], + [ + "gene_synonym", + "ubiD" + ], + [ + "gene_synonym", + "yigC" + ], + [ + "gene_synonym", + "yigY" + ] + ], + "dna_sequence": "ATGGACGCCATGAAATATAACGATTTACGCGACTTCTTGACGCTGCTTGAACAGCAGGGTGAGCTAAAACGTATCACGCTCCCGGTGGATCCGCATCTGGAAATCACTGAAATTGCTGACCGCACTTTGCGTGCCGGTGGGCCTGCGCTGTTGTTCGAAAACCCTAAAGGCTACTCAATGCCGGTGCTGTGCAACCTGTTCGGTACGCCAAAGCGCGTGGCGATGGGCATGGGGCAGGAAGATGTTTCGGCGCTGCGTGAAGTTGGTAAATTATTGGCGTTTCTGAAAGAGCCGGAGCCGCCAAAAGGTTTCCGCGACCTGTTTGATAAACTGCCGCAGTTTAAGCAAGTATTGAACATGCCGACAAAGCGGCTGCGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAAAACAAACTGATTATGCGCTGGCTGTCGCATCGCGGCGGCGCGCTGGATTATCAGGAGTGGTGTGCGGCGCATCCGGGCGAACGTTTCCCGGTTTCTGTGGCGCTGGGTGCCGATCCCGCCACGATTCTCGGTGCAGTCACTCCCGTTCCGGATACGCTTTCAGAGTATGCGTTTGCCGGATTGCTACGTGGCACCAAGACCGAAGTGGTGAAGTGTATCTCCAATGATCTTGAAGTGCCCGCCAGTGCGGAGATTGTGCTGGAAGGGTATATCGAACAAGGCGAAACTGCGCCGGAAGGGCCGTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGA", + "dna_sequence_length": 1494, + "functions": [ + "3-octaprenyl-4-hydroxybenzoate decarboxylase" + ], + "id": "CDS_3777", + "location": [ + [ + "NC_000913", + 4024988, + "+", + 1494 + ] + ], + "md5": "83f1c63a43a17e84e5054f5a84e724c0", + "parent_gene": "", + "protein_md5": "9d7cacf25e6bf152f5cf75cd6bcaff38", + "protein_translation": "MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA", + "protein_translation_length": 497, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012559" + ], + [ + "gene_synonym", + "ECK3836" + ], + [ + "gene_synonym", + "EcoGene:EG10334" + ], + [ + "gene_synonym", + "GI:16131690" + ], + [ + "gene_synonym", + "GeneID:948325" + ], + [ + "gene_synonym", + "JW3820" + ], + [ + "gene_synonym", + "NP_418286.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEN1" + ], + [ + "gene_synonym", + "b3844" + ], + [ + "gene_synonym", + "fadI" + ], + [ + "gene_synonym", + "flrD" + ], + [ + "gene_synonym", + "fre" + ], + [ + "gene_synonym", + "fsrC" + ], + [ + "gene_synonym", + "hsm-6" + ] + ], + "dna_sequence": "ATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGATACCGTATATCGTGTCCGCATCGTGCCAGACGCGGCCTTTTCTTTTCGTGCTGGTCAGTATTTGATGGTAGTGATGGATGAGCGCGACAAACGTCCGTTCTCAATGGCTTCGACGCCGGATGAAAAAGGGTTTATCGAGCTGCATATTGGCGCTTCTGAAATCAACCTTTACGCGAAAGCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACTGGGGCGGGCGTGAAGAGCAGCATCTGTATGATCTCTGCGAGCTTGAGGCGCTTTCGTTGAAGCATCCTGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAGCATGATATCTATATTGCCGGACGTTTTGAGATGGCGAAAATTGCCCGCGATCTGTTTTGCAGTGAGCGTAATGCGCGGGAAGATCGCCTGTTTGGCGATGCGTTTGCATTTATCTGA", + "dna_sequence_length": 702, + "functions": [ + "NAD(P)H-flavin reductase" + ], + "id": "CDS_3778", + "location": [ + [ + "NC_000913", + 4026527, + "+", + 702 + ] + ], + "md5": "9d423042d07f4b888578c9a983743696", + "parent_gene": "", + "protein_md5": "b6cb369f06acaecc00322377c74e9f11", + "protein_translation": "MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012562" + ], + [ + "gene_synonym", + "ECK3837" + ], + [ + "gene_synonym", + "EcoGene:EG10278" + ], + [ + "gene_synonym", + "GI:49176430" + ], + [ + "gene_synonym", + "GeneID:948324" + ], + [ + "gene_synonym", + "JW5578" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21151" + ], + [ + "gene_synonym", + "YP_026272.1" + ], + [ + "gene_synonym", + "b3845" + ], + [ + "gene_synonym", + "fadA" + ], + [ + "gene_synonym", + "oldA" + ] + ], + "dna_sequence": "ATGGAACAGGTTGTCATTGTCGATGCAATTCGCACCCCGATGGGCCGTTCGAAGGGCGGTGCTTTTCGTAACGTGCGTGCAGAAGATCTCTCCGCTCATTTAATGCGTAGCCTGCTGGCGCGTAACCCGGCGCTGGAAGCGGCGGCCCTCGACGATATTTACTGGGGTTGTGTGCAGCAGACGCTGGAGCAGGGTTTTAATATCGCCCGTAACGCGGCGCTGCTGGCAGAAGTACCACACTCTGTCCCGGCGGTTACCGTTAATCGCTTGTGTGGTTCATCCATGCAGGCACTGCATGACGCAGCACGAATGATCATGACTGGCGATGCGCAGGCATGTCTGGTTGGCGGCGTGGAGCATATGGGCCATGTGCCGATGAGTCACGGCGTCGATTTTCACCCCGGCCTGAGCCGCAATGTCGCCAAAGCGGCGGGCATGATGGGCTTAACGGCAGAAATGCTGGCGCGTATGCACGGTATCAGCCGTGAAATGCAGGATGCCTTTGCCGCGCGGTCACACGCCCGCGCCTGGGCCGCCACGCAGTCGGCCGCATTTAAAAATGAAATCATCCCGACCGGTGGTCACGATGCCGACGGCGTCCTGAAGCAGTTTAATTACGACGAAGTGATTCGCCCGGAAACCACCGTGGAAGCCCTCGCCACGCTGCGTCCGGCGTTTGATCCAGTAAACGGTATGGTAACGGCGGGCACATCTTCTGCACTTTCCGATGGCGCAGCTGCCATGCTGGTGATGAGTGAAAGCCGCGCCCATGAATTAGGTCTTAAGCCGCGCGCTCGTGTGCGTTCGATGGCGGTCGTTGGTTGTGACCCATCGATTATGGGTTACGGCCCGGTTCCGGCCTCGAAACTGGCGCTGAAAAAAGCGGGGCTTTCTGCCAGCGATATCGGCGTGTTTGAAATGAACGAAGCCTTTGCCGCGCAGATCCTGCCATGTATTAAAGATCTGGGACTAATTGAGCAGATTGACGAGAAGATCAACCTCAACGGTGGCGCGATCGCGCTGGGTCATCCGCTGGGTTGTTCCGGTGCGCGTATCAGCACCACGCTGCTGAATCTGATGGAACGCAAAGACGTTCAGTTTGGTCTGGCGACGATGTGTATCGGTCTGGGTCAGGGTATTGCGACGGTGTTTGAGCGGGTTTAA", + "dna_sequence_length": 1164, + "functions": [ + "3-ketoacyl-CoA thiolase (thiolase I)" + ], + "id": "CDS_3779", + "location": [ + [ + "NC_000913", + 4028772, + "-", + 1164 + ] + ], + "md5": "d3efc864422c8d1b308b2d6232da04da", + "parent_gene": "", + "protein_md5": "4c1e921f643d6dd26bce3be0fd008021", + "protein_translation": "MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012564" + ], + [ + "gene_synonym", + "ECK3838" + ], + [ + "gene_synonym", + "EcoGene:EG10279" + ], + [ + "gene_synonym", + "GI:16131692" + ], + [ + "gene_synonym", + "GeneID:948336" + ], + [ + "gene_synonym", + "JW3822" + ], + [ + "gene_synonym", + "NP_418288.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21177" + ], + [ + "gene_synonym", + "b3846" + ], + [ + "gene_synonym", + "fadB" + ], + [ + "gene_synonym", + "oldB" + ] + ], + "dna_sequence": "ATGCTTTACAAAGGCGACACCCTGTACCTTGACTGGCTGGAAGATGGCATTGCCGAACTGGTATTTGATGCCCCAGGTTCAGTTAATAAACTCGACACTGCGACCGTCGCCAGCCTCGGCGAGGCCATCGGCGTGCTGGAACAGCAATCAGATCTAAAAGGGCTGCTGCTGCGTTCGAACAAAGCAGCCTTTATCGTCGGTGCTGATATCACCGAATTTTTGTCCCTGTTCCTCGTTCCTGAAGAACAGTTAAGTCAGTGGCTGCACTTTGCCAATAGCGTGTTTAATCGCCTGGAAGATCTGCCGGTGCCGACCATTGCTGCCGTCAATGGCTATGCGCTGGGCGGTGGCTGCGAATGCGTGCTGGCGACCGATTATCGTCTGGCGACGCCGGATCTGCGCATCGGTCTGCCGGAAACCAAACTGGGCATCATGCCTGGCTTTGGCGGTTCTGTACGTATGCCACGTATGCTGGGCGCTGACAGTGCGCTGGAAATCATTGCCGCCGGTAAAGATGTCGGCGCGGATCAGGCGCTGAAAATCGGTCTGGTGGATGGCGTAGTCAAAGCAGAAAAACTGGTTGAAGGCGCAAAGGCGGTTTTACGCCAGGCCATTAACGGCGACCTCGACTGGAAAGCAAAACGTCAGCCGAAGCTGGAACCACTAAAACTGAGCAAGATTGAAGCCACCATGAGCTTCACCATCGCTAAAGGGATGGTCGCACAAACAGCGGGGAAACATTATCCGGCCCCCATCACCGCAGTAAAAACCATTGAAGCTGCGGCCCGTTTTGGTCGTGAAGAAGCCTTAAACCTGGAAAACAAAAGTTTTGTCCCGCTGGCGCATACCAACGAAGCCCGCGCACTGGTCGGCATTTTCCTTAACGATCAATATGTAAAAGGCAAAGCGAAGAAACTCACCAAAGACGTTGAAACCCCGAAACAGGCCGCGGTGCTGGGTGCAGGCATTATGGGCGGCGGCATCGCTTACCAGTCTGCGTGGAAAGGCGTGCCGGTTGTCATGAAAGATATCAACGACAAGTCGTTAACCCTCGGCATGACCGAAGCCGCGAAACTGCTGAACAAGCAGCTTGAGCGCGGCAAGATCGATGGTCTGAAACTGGCTGGCGTGATCTCCACAATCCACCCAACGCTCGACTACGCCGGATTTGACCGCGTGGATATTGTGGTAGAAGCGGTTGTTGAAAACCCGAAAGTGAAAAAAGCCGTACTGGCAGAAACCGAACAAAAAGTACGCCAGGATACCGTGCTGGCGTCTAACACTTCAACCATTCCTATCAGCGAACTGGCCAACGCGCTGGAACGCCCGGAAAACTTCTGCGGGATGCACTTCTTTAACCCGGTCCACCGAATGCCGTTGGTAGAAATTATTCGCGGCGAGAAAAGCTCCGACGAAACCATCGCGAAAGTTGTCGCCTGGGCGAGCAAGATGGGCAAGACGCCGATTGTGGTTAACGACTGCCCCGGCTTCTTTGTTAACCGCGTGCTGTTCCCGTATTTCGCCGGTTTCAGCCAGCTGCTGCGCGACGGCGCGGATTTCCGCAAGATCGACAAAGTGATGGAAAAACAGTTTGGCTGGCCGATGGGCCCGGCATATCTGCTGGACGTTGTGGGCATTGATACCGCGCATCACGCTCAGGCTGTCATGGCAGCAGGCTTCCCGCAGCGGATGCAGAAAGATTACCGCGATGCCATCGACGCGCTGTTTGATGCCAACCGCTTTGGTCAGAAGAACGGCCTCGGTTTCTGGCGTTATAAAGAAGACAGCAAAGGTAAGCCGAAGAAAGAAGAAGACGCCGCCGTTGAAGACCTGCTGGCAGAAGTGAGCCAGCCGAAGCGCGATTTCAGCGAAGAAGAGATTATCGCCCGCATGATGATCCCGATGGTCAACGAAGTGGTGCGCTGTCTGGAGGAAGGCATTATCGCCACTCCGGCGGAAGCGGATATGGCGCTGGTCTACGGCCTGGGCTTCCCTCCGTTCCACGGCGGCGCGTTCCGCTGGCTGGACACCCTCGGTAGCGCAAAATACCTCGATATGGCACAGCAATATCAGCACCTCGGCCCGCTGTATGAAGTGCCGGAAGGTCTGCGTAATAAAGCGCGTCATAACGAACCGTACTATCCTCCGGTTGAGCCAGCCCGTCCGGTTGGCGACCTGAAAACGGCTTAA", + "dna_sequence_length": 2190, + "functions": [ + "fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase" + ], + "id": "CDS_3780", + "location": [ + [ + "NC_000913", + 4030971, + "-", + 2190 + ] + ], + "md5": "8690e3f1ceab4edb38d0bab6138a2a02", + "parent_gene": "", + "protein_md5": "691beae5474d0955d171086479b56197", + "protein_translation": "MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA", + "protein_translation_length": 729, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012569" + ], + [ + "gene_synonym", + "ECK3839" + ], + [ + "gene_synonym", + "EcoGene:EG10698" + ], + [ + "gene_synonym", + "GI:16131693" + ], + [ + "gene_synonym", + "GeneID:948335" + ], + [ + "gene_synonym", + "JW3823" + ], + [ + "gene_synonym", + "NP_418289.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21165" + ], + [ + "gene_synonym", + "b3847" + ], + [ + "gene_synonym", + "pepQ" + ] + ], + "dna_sequence": "ATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGATCATCCCTATCCGTTTAAAGTGAACCCGCAATTCAAAGCGTGGGTGCCGGTAACTCAGGTGCCAAACTGCTGGTTGCTGGTGGATGGCGTGAACAAGCCGAAACTGTGGTTCTATCTGCCGGTTGATTACTGGCACAACGTCGAACCGCTGCCGACCTCTTTCTGGACTGAAGATGTGGAAGTGATCGCGCTGCCGAAAGCCGATGGCATTGGTAGCCTGCTGCCTGCTGCGCGCGGCAATATCGGTTATATCGGTCCGGTGCCGGAACGTGCGCTGCAACTGGGTATTGAGGCCAGCAACATCAACCCGAAAGGGGTTATCGACTACCTGCATTACTATCGCTCCTTCAAAACTGAGTACGAACTGGCCTGTATGCGTGAAGCGCAGAAAATGGCGGTCAACGGTCACCGCGCGGCAGAAGAAGCGTTCCGTTCTGGCATGAGCGAGTTCGATATCAACATTGCCTATCTGACCGCGACCGGTCATCGTGATACCGACGTACCTTACAGCAACATTGTGGCGCTTAACGAACACGCTGCGGTACTGCATTACACCAAACTGGACCATCAGGCACCGGAAGAGATGCGCAGCTTCCTGCTGGATGCCGGGGCAGAATATAACGGCTATGCGGCTGACCTGACCCGTACCTGGTCGGCAAAAAGTGACAACGACTACGCGCAGCTGGTGAAGGACGTTAATGATGAACAACTGGCGCTGATCGCCACCATGAAAGCAGGCGTCAGCTATGTGGATTACCACATCCAGTTCCATCAGCGCATCGCCAAACTGCTGCGTAAACATCAAATCATCACCGATATGAGTGAAGAAGCGATGGTCGAAAACGATCTTACCGGGCCGTTTATGCCGCATGGTATCGGCCATCCGCTGGGCCTGCAGGTGCATGACGTCGCTGGTTTTATGCAGGATGATAGCGGTACGCACCTCGCGGCACCGGCAAAATATCCGTACCTGCGCTGCACCCGTATTCTCCAGCCGGGCATGGTGTTAACCATCGAACCGGGTATCTACTTCATCGAATCGCTACTGGCACCGTGGCGTGAAGGGCAGTTCAGCAAGCACTTCAACTGGCAGAAAATTGAAGCACTGAAACCGTTCGGCGGCATTCGTATCGAAGACAACGTGGTGATCCACGAAAACAACGTGGAAAACATGACCCGGGATCTGAAACTGGCGTGA", + "dna_sequence_length": 1332, + "functions": [ + "proline dipeptidase" + ], + "id": "CDS_3781", + "location": [ + [ + "NC_000913", + 4031161, + "+", + 1332 + ] + ], + "md5": "baa36ed002fea65e4efa30443b27bcc4", + "parent_gene": "", + "protein_md5": "65d5288c2db8222ece4e8f0eb59d4d79", + "protein_translation": "MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012571" + ], + [ + "gene_synonym", + "ECK3840" + ], + [ + "gene_synonym", + "EcoGene:EG11484" + ], + [ + "gene_synonym", + "GI:90111654" + ], + [ + "gene_synonym", + "GeneID:948334" + ], + [ + "gene_synonym", + "JW5577" + ], + [ + "gene_synonym", + "NP_418290.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27862" + ], + [ + "gene_synonym", + "b3848" + ], + [ + "gene_synonym", + "yigZ" + ] + ], + "dna_sequence": "ATGGAAAGCTGGTTAATTCCTGCGGCACCGGTCACGGTCGTTGAAGAGATCAAAAAGAGCCGCTTCATAACGATGTTGGCGCATACCGATGGCGTTGAGGCGGCGAAAGCGTTTGTTGAATCGGTGCGGGCAGAACACCCCGATGCCCGGCACCATTGCGTGGCGTGGGTCGCGGGTGCGCCGGATGATTCTCAACAGCTGGGTTTCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGTGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCTAACGACCCAACGCAAGACGCCATTAACCGAATATACTTTGCAATGTGAATATCATCAGTTAACCGGCATTGAAGCGTTGCTGGGGCAGTGTGACGGCAAAATTATCAACAGTGATTATCAGGCATTCGTTCTGCTGCGGGTGGCGCTTCCGGCGGCGAAAGTGGCTGAATTTTCCGCAAAGCTGGCGGATTTTAGCCGTGGTTCATTGCAATTGTTAGCGATTGAAGAATAA", + "dna_sequence_length": 615, + "functions": [ + "UPF0029 family protein" + ], + "id": "CDS_3782", + "location": [ + [ + "NC_000913", + 4032492, + "+", + 615 + ] + ], + "md5": "d0b449c9bd625245e8b79bfb5bdc2843", + "parent_gene": "", + "protein_md5": "bcbf31653fee5b433fb3d87bcdbebe82", + "protein_translation": "MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012574" + ], + [ + "gene_synonym", + "ECK3841" + ], + [ + "gene_synonym", + "EcoGene:EG11021" + ], + [ + "gene_synonym", + "GI:49176432" + ], + [ + "gene_synonym", + "GeneID:948333" + ], + [ + "gene_synonym", + "JW5576" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFZ7" + ], + [ + "gene_synonym", + "YP_026273.1" + ], + [ + "gene_synonym", + "b3849" + ], + [ + "gene_synonym", + "sapJ" + ], + [ + "gene_synonym", + "trkH" + ] + ], + "dna_sequence": "ATGCATTTTCGCGCCATTACCCGAATCGTTGGACTACTGGTCATCTTATTTTCAGGGACCATGATTATCCCTGGGCTGGTAGCACTCATCTACCGGGATGGAGCGGGCCGCGCTTTTACCCAGACCTTTTTTGTCGCCCTCGCCATTGGCTCTATGCTGTGGTGGCCGAACCGCAAAGAGAAAGGCGAACTTAAATCCCGTGAGGGGTTTCTGATAGTGGTGCTGTTCTGGACCGTGCTGGGTAGCGTCGGTGCGCTCCCTTTTATCTTCTCGGAAAGCCCGAACCTCACGATTACCGATGCGTTTTTTGAATCTTTCTCTGGCCTGACCACTACGGGAGCCACTACGCTGGTGGGGCTGGATTCGCTCCCTCACGCCATCCTCTTTTATCGCCAGATGCTGCAATGGTTTGGCGGGATGGGGATCATCGTGTTGGCGGTTGCGATACTGCCTATCCTCGGCGTGGGTGGGATGCAGCTCTATCGCGCAGAAATGCCCGGCCCGCTGAAAGATAACAAAATGCGCCCGCGAATTGCGGAAACGGCGAAAACCCTGTGGTTGATTTATGTCTTGCTGACCGTCGCCTGTGCGCTGGCGTTGTGGTTTGCCGGAATGGATGCCTTTGATGCCATCGGCCATAGCTTTGCGACTATCGCTATTGGCGGCTTCTCGACACATGATGCCAGTATCGGTTATTTCGATAGCCCGACTATTAACACTATCATTGCTATCTTCCTGCTGATCTCCGGCTGTAACTACGGTCTGCACTTTTCACTGTTAAGTGGGCGTAGTCTGAAGGTTTATTGGCGCGATCCGGAATTTCGCATGTTTATCGGCGTACAGTTTACGCTGGTGGTTATTTGTACCCTCGTACTGTGGTTTCATAATGTCTACAGTTCGGCGCTGATGACAATTAACCAGGCGTTTTTCCAGGTGGTGTCGATGGCGACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGCGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGCATCCGAACGCCGTCTATAGCATTAAGCTGGGGAATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACCAGTATGAACCCGGTGGCTAAATGGATCCTGATTGCCAACATGCTGTTTGGTCGTCTCGAGGTCTTTACATTGCTGGTGCTCTTTACCCCGACTTTCTGGCGTGAATGA", + "dna_sequence_length": 1452, + "functions": [ + "potassium transporter" + ], + "id": "CDS_3783", + "location": [ + [ + "NC_000913", + 4033145, + "+", + 1452 + ] + ], + "md5": "ba7eadf4f1413793916d00eb2dcdf823", + "parent_gene": "", + "protein_md5": "26c37380d6b7a5bc969d70bec5d24d67", + "protein_translation": "MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012577" + ], + [ + "gene_synonym", + "ECK3842" + ], + [ + "gene_synonym", + "EcoGene:EG11485" + ], + [ + "gene_synonym", + "GI:16131696" + ], + [ + "gene_synonym", + "GeneID:948331" + ], + [ + "gene_synonym", + "JW3827" + ], + [ + "gene_synonym", + "NP_418292.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB4" + ], + [ + "gene_synonym", + "b3850" + ], + [ + "gene_synonym", + "hemG" + ], + [ + "gene_synonym", + "yihB" + ] + ], + "dna_sequence": "GTGAAAACATTAATTCTTTTCTCAACAAGGGACGGACAAACGCGCGAGATTGCCTCCTACCTGGCTTCGGAACTGAAAGAACTGGGGATCCAGGCGGATGTCGCCAATGTGCACCGCATTGAAGAACCACAGTGGGAAAACTATGACCGTGTGGTCATTGGTGCTTCTATTCGCTATGGTCACTACCATTCAGCGTTCCAGGAATTTGTCAAAAAACATGCGACGCGGCTGAATTCGATGCCGAGCGCCTTTTACTCCGTGAATCTGGTGGCGCGCAAACCGGAGAAGCGTACTCCACAGACCAACAGCTACGCGCGCAAGTTTCTGATGAACTCGCAATGGCGTCCCGATCGCTGCGCGGTCATTGCCGGGGCGCTGCGTTACCCACGTTATCGCTGGTACGACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAA", + "dna_sequence_length": 546, + "functions": [ + "protoporphyrin oxidase, flavoprotein" + ], + "id": "CDS_3784", + "location": [ + [ + "NC_000913", + 4034608, + "+", + 546 + ] + ], + "md5": "d52cc241f8d79950616fa7d73086f930", + "parent_gene": "", + "protein_md5": "ad6248831722f542f9cdf5490e57ac85", + "protein_translation": "MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTLK", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012591" + ], + [ + "gene_synonym", + "ECK3848" + ], + [ + "gene_synonym", + "EcoGene:EG11828" + ], + [ + "gene_synonym", + "GI:145698333" + ], + [ + "gene_synonym", + "GeneID:948343" + ], + [ + "gene_synonym", + "JW5575" + ], + [ + "gene_synonym", + "NP_418293.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32125" + ], + [ + "gene_synonym", + "b3856" + ], + [ + "gene_synonym", + "mobB" + ], + [ + "gene_synonym", + "yihC" + ] + ], + "dna_sequence": "ATGGCAGGAAAAACGATGATACCGTTACTCGCCTTTGCCGCGTGGAGTGGTACCGGAAAAACTACGCTTTTGAAAAAACTGATCCCGGCATTATGCGCCAGAGGGATCCGTCCAGGGCTGATTAAGCATACGCACCATGATATGGATGTTGATAAGCCAGGCAAAGATAGCTATGAGCTGCGCAAGGCTGGCGCGGCACAAACCATCGTTGCCAGCCAGCAACGATGGGCCTTGATGACGGAAACACCAGACGAAGAAGAGCTGGATCTACAGTTTCTCGCAAGTCGAATGGATACCTCAAAGCTGGATTTGATTCTGGTCGAAGGGTTTAAGCATGAAGAGATCGCAAAGATTGTGCTGTTTCGCGATGGAGCCGGACATCGACCTGAAGAATTAGTGATAGACAGGCATGTTATTGCTGTAGCCAGTGATGTGCCGCTTAATCTTGATGTCGCATTACTGGATATTAATGATGTTGAGGGGCTGGCTGATTTTGTGGTGGAGTGGATGCAAAAGCAGAACGGATAA", + "dna_sequence_length": 528, + "functions": [ + "molybdopterin-guanine dinucleotide biosynthesis protein B" + ], + "id": "CDS_3785", + "location": [ + [ + "NC_000913", + 4041433, + "-", + 528 + ] + ], + "md5": "258b373e370f5c36952585d089eb7b46", + "parent_gene": "", + "protein_md5": "6fef7098bf0d49adc0ce6c0e8a853640", + "protein_translation": "MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012593" + ], + [ + "gene_synonym", + "ECK3849" + ], + [ + "gene_synonym", + "EcoGene:EG11829" + ], + [ + "gene_synonym", + "GI:16131698" + ], + [ + "gene_synonym", + "GeneID:948349" + ], + [ + "gene_synonym", + "JW3829" + ], + [ + "gene_synonym", + "NP_418294.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32173" + ], + [ + "gene_synonym", + "b3857" + ], + [ + "gene_synonym", + "chlB" + ], + [ + "gene_synonym", + "mob" + ], + [ + "gene_synonym", + "mobA" + ], + [ + "gene_synonym", + "narB" + ] + ], + "dna_sequence": "GTGAATCTGATGACGACGATAACAGGCGTTGTGCTGGCAGGCGGTAAAGCCAGACGAATGGGCGGCGTAGATAAAGGATTGCTTGAATTAAACGGCAAACCATTATGGCAACATGTCGCTGACGCGCTTATGACGCAGCTCTCTCACGTCGTGGTTAATGCTAATCGTCATCAGGAAATCTATCAGGCAAGCGGTCTGAAAGTGATTGAAGATTCACTGGCGGATTACCCAGGCCCTCTGGCAGGAATGCTTTCAGTAATGCAGCAGGAAGCTGGTGAGTGGTTTTTGTTTTGCCCGTGCGATACGCCTTACATTCCCCCTGATTTAGCAGCCAGGCTTAATCATCAGCGCAAAGATGCGCCTGTCGTGTGGGTCCATGACGGTGAACGCGATCACCCGACTATTGCTCTGGTAAACCGCGCTATTGAGCCTTTATTACTGGAATATCTGCAAGCAGGAGAACGCCGGGTAATGGTATTTATGCGTCTGGCTGGCGGTCATGCGGTTGATTTCAGCGATCATAAAGATGCATTTGTTAACGTGAATACGCCAGAGGAGCTTGCCCGATGGCAGGAAAAACGATGA", + "dna_sequence_length": 585, + "functions": [ + "molybdopterin-guanine dinucleotide synthase" + ], + "id": "CDS_3786", + "location": [ + [ + "NC_000913", + 4041999, + "-", + 585 + ] + ], + "md5": "cef3fe7bffae80da8bfff6c149d8c16e", + "parent_gene": "", + "protein_md5": "3e954503a010f3f318a4e4d35b716fb5", + "protein_translation": "MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMVFMRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012599" + ], + [ + "gene_synonym", + "ECK3850" + ], + [ + "gene_synonym", + "EcoGene:EG11830" + ], + [ + "gene_synonym", + "GI:16131699" + ], + [ + "gene_synonym", + "GeneID:948348" + ], + [ + "gene_synonym", + "JW3830" + ], + [ + "gene_synonym", + "NP_418295.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADP9" + ], + [ + "gene_synonym", + "b3858" + ], + [ + "gene_synonym", + "yihD" + ] + ], + "dna_sequence": "ATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACGGATGACATTCTGATCTATCACCTGAAAATGCGTGATTCCGCGAAAGATGCGGTGATCCCGGGTTTGCAGAAAGATTATGAAGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAA", + "dna_sequence_length": 270, + "functions": [ + "DUF1040 protein YihD" + ], + "id": "CDS_3787", + "location": [ + [ + "NC_000913", + 4042069, + "+", + 270 + ] + ], + "md5": "a65b05222b7d2a44126ce3721c3bc302", + "parent_gene": "", + "protein_md5": "45589e0d6140d039b9ea5e4c18478b35", + "protein_translation": "MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012604" + ], + [ + "gene_synonym", + "ECK3851" + ], + [ + "gene_synonym", + "EcoGene:EG11831" + ], + [ + "gene_synonym", + "GI:16131700" + ], + [ + "gene_synonym", + "GeneID:948346" + ], + [ + "gene_synonym", + "JW3831" + ], + [ + "gene_synonym", + "NP_418296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0K3" + ], + [ + "gene_synonym", + "b3859" + ], + [ + "gene_synonym", + "orfA" + ], + [ + "gene_synonym", + "rdoA" + ], + [ + "gene_synonym", + "srkA" + ], + [ + "gene_synonym", + "yihE" + ] + ], + "dna_sequence": "ATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTCTGTTTGAGCATGGGATCCGGGTGGATTCCGGTCTTACCCCGCTTAACAGCTATGAAAACCGTGTCTATCAATTTCAGGACGAAGATCGTCGACGTTTTGTCGTCAAATTTTATCGCCCTGAACGTTGGACAGCCGATCAAATCCTCGAAGAACATCAATTTGCGTTGCAGCTGGTAAATGATGAAGTTCCGGTCGCAGCACCTGTGGCCTTTAACGGTCAGACTTTATTGAATCATCAGGGATTTTATTTCGCTGTTTTTCCAAGCGTCGGTGGTCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCGCGTTCCCGAAAAATTTCCCGTGGTTAACCGGGGAAGATTACTGGCTGCGACAGACGGCGACTTTTATAGAACAGGCAAAAGTTCTACAAGAACCCCCTTTGCAATTAACACCTATGTATTAA", + "dna_sequence_length": 987, + "functions": [ + "Cpx stress response Thr/Ser protein kinase", + "MazF antagonist protein" + ], + "id": "CDS_3788", + "location": [ + [ + "NC_000913", + 4042415, + "+", + 987 + ] + ], + "md5": "3f94437e31baae93d18cd4510a2245f1", + "parent_gene": "", + "protein_md5": "c807cf16dda9db235ed6b13ca07b8e45", + "protein_translation": "MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012606" + ], + [ + "gene_synonym", + "ECK3852" + ], + [ + "gene_synonym", + "EcoGene:EG11297" + ], + [ + "gene_synonym", + "GI:16131701" + ], + [ + "gene_synonym", + "GeneID:948353" + ], + [ + "gene_synonym", + "JW3832" + ], + [ + "gene_synonym", + "NP_418297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEG4" + ], + [ + "gene_synonym", + "b3860" + ], + [ + "gene_synonym", + "dsbA" + ], + [ + "gene_synonym", + "dsf" + ], + [ + "gene_synonym", + "iarA" + ], + [ + "gene_synonym", + "ppfA" + ] + ], + "dna_sequence": "ATGAAAAAGATTTGGCTGGCGCTGGCTGGTTTAGTTTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCGTGAAGATGACTAAATACCACGTCAACTTCATGGGTGGTGACCTGGGCAAAGATCTGACTCAGGCATGGGCTGTGGCGATGGCGCTGGGCGTGGAAGACAAAGTGACTGTTCCGCTGTTTGAAGGCGTACAGAAAACCCAGACCATTCGTTCTGCTTCTGATATCCGCGATGTATTTATCAACGCAGGTATTAAAGGTGAAGAGTACGACGCGGCGTGGAACAGCTTCGTGGTGAAATCTCTGGTCGCTCAGCAGGAAAAAGCTGCAGCTGACGTGCAATTGCGTGGCGTTCCGGCGATGTTTGTTAACGGTAAATATCAGCTGAATCCGCAGGGTATGGATACCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAA", + "dna_sequence_length": 627, + "functions": [ + "periplasmic protein disulfide isomerase I" + ], + "id": "CDS_3789", + "location": [ + [ + "NC_000913", + 4043418, + "+", + 627 + ] + ], + "md5": "8e71577eec7df8fad7fdf3128c5b5d1f", + "parent_gene": "", + "protein_md5": "448e34c14fd2dd95f0789642f7347452", + "protein_translation": "MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012609" + ], + [ + "gene_synonym", + "ECK3853" + ], + [ + "gene_synonym", + "EcoGene:EG11832" + ], + [ + "gene_synonym", + "GI:90111655" + ], + [ + "gene_synonym", + "GeneID:948352" + ], + [ + "gene_synonym", + "JW5574" + ], + [ + "gene_synonym", + "NP_418298.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32128" + ], + [ + "gene_synonym", + "b3861" + ], + [ + "gene_synonym", + "yihF" + ] + ], + "dna_sequence": "ATGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACGGTCCGTTGCCCATCACAATGTTAATGCATGGTAATGTCATCCCAGCACTGGCAGCGGCAAAAGTGAACTTAGTGAATAATGAACTGACACAACCGCTATTTATCGCCGCGAAAAATAAATCGCCCGTGGAAGCGACATTGCGATTCGCGTTTGGTGGCTCATTCTCTACGACATTAGATGTTGCCCCTGCAGAGTATGGAAAGTTTTCTTTTGGTGAGGGCCAGTTTACTTTTAATGGTGATGGTAGTTCATTGTCTAACCTGGATATTGAAGGCAAAGTCGAAGATATTGTTCTGCAATTATCACCAATGAACAAAGTAACGGCAAAAAGTTTTACCATTGATTCTCTGGCGCGATTAGAAGAAAAGAAATTTCCGGTTGGTGAAAGCGAGTCGAAATTTAATCAGATTAACATTATCAATCACGGGGAAGACGTTGCCCAAATCGATGCTTTCGTTGCAAAAACCAGGCTGGATCGCGTTAAAGACAAAGATTATATCAATGTCAATCTCACCTACGAACTTGATAAGTTAACAAAAGGGAATCAGCAACTCGGTAGTGGTGAGTGGTCATTGATTGCTGAATCTATTGATCCCTCAGCAGTGCGCCAATTTATCATCCAGTATAACATTGCGATGCAGAAGCAGCTTGCTGCACACCCTGAGTTAGCAAACGATGAAGTTGCTCTGCAAGAAGTGAATGCTGCATTGTTCAAAGAGTATTTACCGTTATTACAAAAAAGTGAGCCGACCATTAAACAACCGGTAAGATGGAAGAACGCACTCGGCGAACTAAATGCCAATCTGGATATCAGTATTGCCGACCCAGCCAAATCTTCATCATCCACAAACAAAGATATCAAATCGCTCAATTTTGATGTGAAGTTACCGCTTAATGTCGTCACAGAAACCGCAAAACAGCTTAATTTATCTGAAGGAATGGATGCGGAAAAAGCGCAAAAGCAGGCTGATAAACAAATCAGCGGGATGATGACATTAGGTCAGATGTTTCAGTTAATCACGATTGACAACAATACCGCCTCGCTGCAGCTGCGTTATACACCGGGTAAAGTTGTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAA", + "dna_sequence_length": 1431, + "functions": [ + "DUF945 family protein" + ], + "id": "CDS_3790", + "location": [ + [ + "NC_000913", + 4044199, + "+", + 1431 + ] + ], + "md5": "53155cd0261c9c60f5ac7dabd725fd07", + "parent_gene": "", + "protein_md5": "15380a1c2b19f559e5028f85067cdd2a", + "protein_translation": "MIRKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYQNFDKGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVRWKNALGELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKQADKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH", + "protein_translation_length": 476, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012611" + ], + [ + "gene_synonym", + "ECK3854" + ], + [ + "gene_synonym", + "EcoGene:EG11833" + ], + [ + "gene_synonym", + "GI:16131703" + ], + [ + "gene_synonym", + "GeneID:948350" + ], + [ + "gene_synonym", + "JW3834" + ], + [ + "gene_synonym", + "NP_418299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32129" + ], + [ + "gene_synonym", + "b3862" + ], + [ + "gene_synonym", + "yihG" + ] + ], + "dna_sequence": "ATGGCTAACCTTTTGAATAAATTCATTATGACGAGAATACTCGCTGCGATAACCCTTTTGCTGAGTATCGTATTGACCATTTTGGTCACTATTTTTTGTTCCGTCCCGATCATCATTGCCGGGATTGTAAAACTATTGCTACCTGTGCCAGTCATTTGGCGAAAGGTTTCGCGTTTTTGTGATTTTATGATGTATTGCTGGTGTGAAGGTCTGGCGGTATTACTGCATCTGAACCCACACCTTCAATGGGAAGTTCACGGGCTGGAAGGGTTAAGTAAGAAGAACTGGTATCTGCTTATTTGTAACCACCGTAGTTGGGCAGATATTGTCGTACTGTGCGTGCTGTTTCGTAAGCACATTCCGATGAATAAATATTTCCTCAAGCAACAGCTGGCCTGGGTGCCATTTCTTGGCCTGGCGTGCTGGTCGCTGGATATGCCGTTTATGAAGCGTTATTCCCGCGCTTATTTATTACGTCATCCGGAGCGACGTGGTAAAGATGTTGAAACCACTCGGCGTTCTTGTGAAAAGTTTCGCCTGCATCCCACCACCATTGTCAATTTCGTTGAAGGCTCCCGTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAACTTGTTGCCACCAAAGGCGGCAGGCATTGCGATGGCGCTAAATGTACTGGGTAAACAATTCGATAAACTGCTTAATGTTACGCTGTGTTATCCGGACAATAACCGTCAGCCGTTCTTCGATATGTTAAGCGGTAAACTGACGCGGATTGTCGTACATGTGGATTTACAGCCTATTGCCGATGAGTTACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAA", + "dna_sequence_length": 933, + "functions": [ + "inner membrane protein, inner membrane acyltransferase" + ], + "id": "CDS_3791", + "location": [ + [ + "NC_000913", + 4046602, + "-", + 933 + ] + ], + "md5": "286eaa1439646be5567ba85e96f395dc", + "parent_gene": "", + "protein_md5": "2e6af8067c3570f99be06c87394bbcd2", + "protein_translation": "MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012618" + ], + [ + "gene_synonym", + "ECK3855" + ], + [ + "gene_synonym", + "EcoGene:EG10746" + ], + [ + "gene_synonym", + "GI:16131704" + ], + [ + "gene_synonym", + "GeneID:948356" + ], + [ + "gene_synonym", + "JW3835" + ], + [ + "gene_synonym", + "NP_418300.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00582" + ], + [ + "gene_synonym", + "b3863" + ], + [ + "gene_synonym", + "polA" + ], + [ + "gene_synonym", + "resA" + ] + ], + "dna_sequence": "ATGGTTCAGATCCCCCAAAATCCACTTATCCTTGTAGATGGTTCATCTTATCTTTATCGCGCATATCACGCGTTTCCCCCGCTGACTAACAGCGCAGGCGAGCCGACCGGTGCGATGTATGGTGTCCTCAACATGCTGCGCAGTCTGATCATGCAATATAAACCGACGCATGCAGCGGTGGTCTTTGACGCCAAGGGAAAAACCTTTCGTGATGAACTGTTTGAACATTACAAATCACATCGCCCGCCAATGCCGGACGATCTGCGTGCACAAATCGAACCCTTGCACGCGATGGTTAAAGCGATGGGACTGCCGCTGCTGGCGGTTTCTGGCGTAGAAGCGGACGACGTTATCGGTACTCTGGCGCGCGAAGCCGAAAAAGCCGGGCGTCCGGTGCTGATCAGCACTGGCGATAAAGATATGGCGCAGCTGGTGACGCCAAATATTACGCTTATCAATACCATGACGAATACCATCCTCGGACCGGAAGAGGTGGTGAATAAGTACGGCGTGCCGCCAGAACTGATCATCGATTTCCTGGCGCTGATGGGTGACTCCTCTGATAACATTCCTGGCGTACCGGGCGTCGGTGAAAAAACCGCGCAGGCATTGCTGCAAGGTCTTGGCGGACTGGATACGCTGTATGCCGAGCCAGAAAAAATTGCTGGGTTGAGCTTCCGTGGCGCGAAAACAATGGCAGCGAAGCTCGAGCAAAACAAAGAAGTTGCTTATCTCTCATACCAGCTGGCGACGATTAAAACCGACGTTGAACTGGAGCTGACCTGTGAACAACTGGAAGTGCAGCAACCGGCAGCGGAAGAGTTGTTGGGGCTGTTCAAAAAGTATGAGTTCAAACGCTGGACTGCTGATGTCGAAGCGGGCAAATGGTTACAGGCCAAAGGGGCAAAACCAGCCGCGAAGCCACAGGAAACCAGTGTTGCAGACGAAGCACCAGAAGTGACGGCAACGGTGATTTCTTATGACAACTACGTCACCATCCTTGATGAAGAAACACTGAAAGCGTGGATTGCGAAGCTGGAAAAAGCGCCGGTATTTGCATTTGATACCGAAACCGACAGCCTTGATAACATCTCTGCTAACCTGGTCGGGCTTTCTTTTGCTATCGAGCCAGGCGTAGCGGCATATATTCCGGTTGCTCATGATTATCTTGATGCGCCCGATCAAATCTCTCGCGAGCGTGCACTCGAGTTGCTAAAACCGCTGCTGGAAGATGAAAAGGCGCTGAAGGTCGGGCAAAACCTGAAATACGATCGCGGTATTCTGGCGAACTACGGCATTGAACTGCGTGGGATTGCGTTTGATACCATGCTGGAGTCCTACATTCTCAATAGCGTTGCCGGGCGTCACGATATGGACAGCCTCGCGGAACGTTGGTTGAAGCACAAAACCATCACTTTTGAAGAGATTGCTGGTAAAGGCAAAAATCAACTGACCTTTAACCAGATTGCCCTCGAAGAAGCCGGACGTTACGCCGCCGAAGATGCAGATGTCACCTTGCAGTTGCATCTGAAAATGTGGCCGGATCTGCAAAAACACAAAGGGCCGTTGAACGTCTTCGAGAATATCGAAATGCCGCTGGTGCCGGTGCTTTCACGCATTGAACGTAACGGTGTGAAGATCGATCCGAAAGTGCTGCACAATCATTCTGAAGAGCTCACCCTTCGTCTGGCTGAGCTGGAAAAGAAAGCGCATGAAATTGCAGGTGAGGAATTTAACCTTTCTTCCACCAAGCAGTTACAAACCATTCTCTTTGAAAAACAGGGCATTAAACCGCTGAAGAAAACGCCGGGTGGCGCGCCGTCAACGTCGGAAGAGGTACTGGAAGAACTGGCGCTGGACTATCCGTTGCCAAAAGTGATTCTGGAGTATCGTGGTCTGGCGAAGCTGAAATCGACCTACACCGACAAGCTGCCGCTGATGATCAACCCGAAAACCGGGCGTGTGCATACCTCTTATCACCAGGCAGTAACTGCAACGGGACGTTTATCGTCAACCGATCCTAACCTGCAAAACATTCCGGTGCGTAACGAAGAAGGTCGTCGTATCCGCCAGGCGTTTATTGCGCCAGAGGATTATGTGATTGTCTCAGCGGACTACTCGCAGATTGAACTGCGCATTATGGCGCATCTTTCGCGTGACAAAGGCTTGCTGACCGCATTCGCGGAAGGAAAAGATATCCACCGGGCAACGGCGGCAGAAGTGTTTGGTTTGCCACTGGAAACCGTCACCAGCGAGCAACGCCGTAGCGCGAAAGCGATCAACTTTGGTCTGATTTATGGCATGAGTGCTTTCGGTCTGGCGCGGCAATTGAACATTCCACGTAAAGAAGCGCAGAAGTACATGGACCTTTACTTCGAACGCTACCCTGGCGTGCTGGAGTATATGGAACGCACCCGTGCTCAGGCGAAAGAGCAGGGCTACGTTGAAACGCTGGACGGACGCCGTCTGTATCTGCCGGATATCAAATCCAGCAATGGTGCTCGTCGTGCAGCGGCTGAACGTGCAGCCATTAACGCGCCAATGCAGGGAACCGCCGCCGACATTATCAAACGGGCGATGATTGCCGTTGATGCGTGGTTACAGGCTGAGCAACCGCGTGTACGTATGATCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAA", + "dna_sequence_length": 2787, + "functions": [ + "5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease" + ], + "id": "CDS_3792", + "location": [ + [ + "NC_000913", + 4046966, + "+", + 2787 + ] + ], + "md5": "2b1858ca36312fe4567f955f96beef80", + "parent_gene": "", + "protein_md5": "b32cef3a9da05b0df90eb1895645e93a", + "protein_translation": "MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH", + "protein_translation_length": 928, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012623" + ], + [ + "gene_synonym", + "ECK3857" + ], + [ + "gene_synonym", + "EcoGene:EG11203" + ], + [ + "gene_synonym", + "GI:145698334" + ], + [ + "gene_synonym", + "GeneID:948358" + ], + [ + "gene_synonym", + "JW5930" + ], + [ + "gene_synonym", + "NP_418301.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6P7" + ], + [ + "gene_synonym", + "b3865" + ], + [ + "gene_synonym", + "engB" + ], + [ + "gene_synonym", + "yihA" + ] + ], + "dna_sequence": "TTGACTAATTTGAATTATCAACAGACGCATTTTGTGATGAGTGCGCCTGATATTCGCCACCTACCTTCCGATACCGGAATTGAAGTGGCTTTTGCAGGCCGTTCCAACGCAGGTAAATCCAGCGCGCTGAACACGCTGACTAACCAGAAAAGCCTGGCTCGTACCTCAAAAACCCCAGGGCGCACCCAGCTTATCAACCTGTTTGAAGTGGCTGACGGCAAGCGTCTGGTTGACTTGCCTGGGTACGGTTATGCGGAAGTCCCGGAAGAGATGAAGCGCAAATGGCAGCGTGCGCTCGGCGAATACCTCGAAAAACGTCAGAGCCTGCAAGGTCTGGTGGTGCTAATGGATATTCGCCATCCGCTGAAAGATTTGGATCAGCAGATGATTGAGTGGGCGGTAGACAGCAATATCGCCGTTCTGGTGCTGCTGACCAAAGCGGACAAACTGGCAAGCGGCGCACGTAAAGCGCAATTGAATATGGTGCGTGAAGCTGTACTGGCGTTTAACGGTGATGTGCAGGTTGAAACGTTTTCTTCGTTGAAGAAACAAGGCGTGGACAAGCTGCGGCAGAAACTGGATACCTGGTTTAGCGAGATGCAGCCTGTAGAAGAAACGCAGGACGGCGAATAA", + "dna_sequence_length": 633, + "functions": [ + "cell division GTP-binding protein" + ], + "id": "CDS_3793", + "location": [ + [ + "NC_000913", + 4050765, + "-", + 633 + ] + ], + "md5": "06977426b7c41c31d5148e2431e88edf", + "parent_gene": "", + "protein_md5": "16598aaf584fa79e607258db285c63b6", + "protein_translation": "MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012626" + ], + [ + "gene_synonym", + "ECK3859" + ], + [ + "gene_synonym", + "EcoGene:EG11835" + ], + [ + "gene_synonym", + "GI:16131706" + ], + [ + "gene_synonym", + "GeneID:948363" + ], + [ + "gene_synonym", + "JW3837" + ], + [ + "gene_synonym", + "NP_418302.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8H6" + ], + [ + "gene_synonym", + "b3866" + ], + [ + "gene_synonym", + "yihI" + ] + ], + "dna_sequence": "ATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAACACGCGAGGAGCTGGATCAGGAAGCTCGTGATCGCAAGCGTCAGAAAAAACGTCGTGGTCATGCGCCGGGCAGCCGCGCAGCGGGCGGAAACACCACGTCAGGCAGCAAAGGCCAGAACGCACCAAAAGATCCACGTATTGGCAGTAAAACCCCTATTCCATTGGGCGTGACTGAAAAAGTCACCAAACAGCACAAACCGAAGAGTGAGAAACCTATGCTTTCACCGCAGGCGGAGTTGGAATTACTGGAAACGGATGAGCGTCTGGATGCGCTGCTGGAACGTCTGGAAGCAGGCGAAACCCTGAGTGCCGAAGAGCAATCCTGGGTGGATGCTAAACTGGATCGTATTGATGAGTTGATGCAGAAACTCGGCCTCTCTTATGACGATGACGAAGAAGAGGAAGAAGACGAGAAGCAAGAAGACATGATGCGTCTGCTGCGGGGCAACTAA", + "dna_sequence_length": 510, + "functions": [ + "activator of Der GTPase" + ], + "id": "CDS_3794", + "location": [ + [ + "NC_000913", + 4051347, + "+", + 510 + ] + ], + "md5": "df888de0e7f4caa2e863d3f2fbb1e35b", + "parent_gene": "", + "protein_md5": "d6d01f403ba2cc3896163106ecc766cc", + "protein_translation": "MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN", + "protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012629" + ], + [ + "gene_synonym", + "ECK3860" + ], + [ + "gene_synonym", + "EcoGene:EG11836" + ], + [ + "gene_synonym", + "GI:90111657" + ], + [ + "gene_synonym", + "GeneID:948362" + ], + [ + "gene_synonym", + "JW3838" + ], + [ + "gene_synonym", + "NP_418303.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32131" + ], + [ + "gene_synonym", + "b3867" + ], + [ + "gene_synonym", + "hemN" + ], + [ + "gene_synonym", + "yihJ" + ] + ], + "dna_sequence": "ATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACAAGCCGTGGCGCGCTATCCTGAGCGTCCATTATCTCTCTACGTACATATCCCGTTCTGCCATAAGCTTTGTTACTTCTGCGGTTGCAATAAGATTGTTACTCGCCAGCAGCACAAGGCCGATCAGTATCTGGACGCGCTGGAGCAAGAAATCGTCCATCGTGCACCGCTGTTCGCCGGGCGTCACGTCAGCCAATTGCACTGGGGCGGCGGAACGCCGACGTATCTGAATAAAGCGCAAATCAGCCGCCTGATGAAGCTGCTGCGCGAAAACTTCCAGTTCAATGCCGATGCGGAGATTTCGATCGAAGTCGATCCGCGGGAAATCGAACTGGATGTACTCGATCATTTACGCGCCGAAGGCTTTAATCGCCTGAGCATGGGCGTGCAGGACTTCAACAAAGAAGTGCAACGTCTGGTTAACCGCGAGCAGGATGAAGAGTTCATCTTTGCACTGCTTAACCATGCGCGTGAGATTGGTTTTACCTCCACCAACATCGACCTGATTTACGGCCTGCCGAAACAGACGCCGGAGAGTTTCGCCTTTACCCTGAAACGTGTGGCGGAGCTGAACCCCGATCGTCTGAGTGTCTTTAACTACGCGCATCTGCCGACCATTTTTGCTGCTCAGCGCAAAATCAAAGATGCTGACCTGCCGAGTCCGCAGCAAAAACTCGATATCCTGCAGGAAACCATCGCCTTCCTGACGCAATCGGGCTATCAGTTTATCGGTATGGATCACTTTGCCCGTCCGGATGACGAGCTGGCGGTGGCCCAGCGTGAAGGCGTGCTGCATCGTAACTTCCAGGGCTACACCACTCAGGGCGATACCGATCTGCTGGGGATGGGCGTTTCCGCCATCAGCATGATTGGCGACTGCTACGCGCAGAACCAGAAAGAGTTGAAGCAGTACTATCAGCAAGTGGATGAACAAGGCAATGCGCTGTGGCGTGGTATTGCGCTAACGCGTGATGACTGTATTCGCCGCGATGTGATTAAGTCGCTCATCTGCAACTTCCGTCTGGATTACGCCCCTATTGAGAAACAGTGGGATTTGCACTTCGCTGATTACTTTGCGGAAGATCTCAAGCTGCTCGCCCCGTTAGCAAAAGATGGGCTGGTGGATGTGGATGAGAAGGGAATACAGGTGACGGCGAAAGGTCGCTTGCTGATCCGCAACATTTGCATGTGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAA", + "dna_sequence_length": 1374, + "functions": [ + "coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent" + ], + "id": "CDS_3795", + "location": [ + [ + "NC_000913", + 4052045, + "+", + 1374 + ] + ], + "md5": "c316f6ca3718a3f2150ee33066b5576d", + "parent_gene": "", + "protein_md5": "740de0cf66dad4cc29af44f7df31b4ef", + "protein_translation": "MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARMQQFSRVI", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4501" + ], + [ + "gene_synonym", + "EcoGene:EG14491" + ], + [ + "gene_synonym", + "GI:226524761" + ], + [ + "gene_synonym", + "GeneID:7751621" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P620" + ], + [ + "gene_synonym", + "YP_002791260.1" + ], + [ + "gene_synonym", + "b4686" + ], + [ + "gene_synonym", + "yshB" + ] + ], + "dna_sequence": "ATGCTGGAATCAATAATTAATCTGGTATCGAGTGGCGCAGTTGACAGCCACACACCGCAAACTGCCGTTGCTGCCGTGCTGTGTGCCGCAATGATTGGGCTGTTTAGCTGA", + "dna_sequence_length": 111, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3796", + "location": [ + [ + "NC_000913", + 4053757, + "-", + 111 + ] + ], + "md5": "795c8d77fef667c979e18443a71fbecf", + "parent_gene": "", + "protein_md5": "d1bb35837393037c15140abb2b2e8095", + "protein_translation": "MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS", + "protein_translation_length": 36, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012632" + ], + [ + "gene_synonym", + "ECK3861" + ], + [ + "gene_synonym", + "EcoGene:EG10385" + ], + [ + "gene_synonym", + "GI:16131708" + ], + [ + "gene_synonym", + "GeneID:948361" + ], + [ + "gene_synonym", + "JW3839" + ], + [ + "gene_synonym", + "NP_418304.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB8" + ], + [ + "gene_synonym", + "b3868" + ], + [ + "gene_synonym", + "glnG" + ], + [ + "gene_synonym", + "glnT" + ], + [ + "gene_synonym", + "ntrC" + ] + ], + "dna_sequence": "ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGGTTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAGATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATTATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGATATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTAACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCGCGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGAAAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAAATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTATGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCCGTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGTCTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGCTCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGCAGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGACAGCTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCCAGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA", + "dna_sequence_length": 1410, + "functions": [ + "fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein" + ], + "id": "CDS_3797", + "location": [ + [ + "NC_000913", + 4055278, + "-", + 1410 + ] + ], + "md5": "e7350d491cc64b2e614c60805d009fde", + "parent_gene": "", + "protein_md5": "2e4923d18ec24bccc33a37b0a1ac41dd", + "protein_translation": "MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME", + "protein_translation_length": 469, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012634" + ], + [ + "gene_synonym", + "ECK3862" + ], + [ + "gene_synonym", + "EcoGene:EG10387" + ], + [ + "gene_synonym", + "GI:16131709" + ], + [ + "gene_synonym", + "GeneID:948360" + ], + [ + "gene_synonym", + "JW3840" + ], + [ + "gene_synonym", + "NP_418305.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB5" + ], + [ + "gene_synonym", + "b3869" + ], + [ + "gene_synonym", + "glnL" + ], + [ + "gene_synonym", + "glnR" + ], + [ + "gene_synonym", + "ntrB" + ] + ], + "dna_sequence": "ATGGCAACAGGCACGCAGCCCGATGCTGGGCAGATCCTCAACTCGCTGATTAACAGTATTTTGTTAATCGATGACAACCTGGCGATCCATTACGCCAACCCTGCCGCGCAACAACTGCTCGCCCAAAGCTCCCGCAAATTGTTTGGTACACCGTTACCGGAACTGTTGAGCTACTTCTCATTAAATATCGAGCTGATGCAAGAAAGTCTGGAGGCGGGGCAAGGTTTTACCGATAACGAAGTGACGCTGGTCATCGACGGGCGCTCGCATATCCTTTCTGTGACGGCCCAGCGTATGCCGGACGGCATGATCCTGCTGGAGATGGCTCCGATGGATAACCAGCGCCGCTTAAGTCAGGAACAGCTACAGCACGCCCAGCAGGTTGCTGCCCGTGATTTAGTGCGCGGCCTGGCACATGAGATTAAAAATCCGCTTGGCGGTTTACGTGGCGCGGCGCAGCTGCTCAGCAAAGCGTTACCTGACCCATCACTACTCGAATATACCAAAGTGATTATCGAACAGGCGGACCGGCTGCGAAATCTGGTCGACCGTCTGTTGGGGCCGCAGCTGCCCGGTACGCGCGTTACCGAAAGTATTCACAAAGTGGCTGAACGCGTGGTAACGCTGGTGTCGATGGAACTGCCGGACAACGTGCGGTTGATTCGTGATTACGATCCCAGCCTACCGGAACTGGCGCACGACCCGGATCAAATTGAACAGGTCTTGCTGAATATTGTGCGCAATGCGCTACAGGCGCTGGGGCCGGAAGGCGGTGAAATCATTCTGCGTACCCGCACCGCGTTTCAACTGACCTTACACGGCGAGCGCTACCGGCTGGCGGCGCGGATTGATGTGGAAGATAACGGGCCGGGCATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATGGTCAGCGGCCGCGAAGGTGGCACCGGGCTTGGCTTATCCATCGCTCGTAATTTGATTGATCAGCATTCAGGCAAAATTGAATTTACCAGTTGGCCAGGGCATACCGAGTTCTCGGTTTACCTGCCTATCAGGAAATAA", + "dna_sequence_length": 1050, + "functions": [ + "sensory histidine kinase in two-component regulatory system with GlnG" + ], + "id": "CDS_3798", + "location": [ + [ + "NC_000913", + 4056339, + "-", + 1050 + ] + ], + "md5": "1fd12531baae3bc0f593c70ac592aa6d", + "parent_gene": "", + "protein_md5": "57bebe9c13da525f9cde187fb901cd5e", + "protein_translation": "MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDGMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK", + "protein_translation_length": 349, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012640" + ], + [ + "gene_synonym", + "ECK3863" + ], + [ + "gene_synonym", + "EcoGene:EG10383" + ], + [ + "gene_synonym", + "GI:16131710" + ], + [ + "gene_synonym", + "GeneID:948370" + ], + [ + "gene_synonym", + "JW3841" + ], + [ + "gene_synonym", + "NP_418306.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C5" + ], + [ + "gene_synonym", + "b3870" + ], + [ + "gene_synonym", + "glnA" + ] + ], + "dna_sequence": "ATGTCCGCTGAACACGTACTGACGATGCTGAACGAGCACGAAGTGAAGTTTGTTGATTTGCGCTTCACCGATACTAAAGGTAAAGAACAGCACGTCACTATCCCTGCTCATCAGGTGAATGCTGAATTCTTCGAAGAAGGCAAAATGTTTGACGGCTCCTCGATTGGCGGCTGGAAAGGCATTAACGAGTCCGACATGGTGCTGATGCCAGACGCATCCACCGCAGTGATTGACCCGTTCTTCGCCGACTCCACCCTGATTATCCGTTGCGACATCCTTGAACCTGGCACCCTGCAAGGCTATGACCGTGACCCGCGCTCCATTGCGAAGCGCGCCGAAGATTACCTGCGTTCCACTGGCATTGCCGACACCGTACTGTTCGGGCCAGAACCTGAATTCTTCCTGTTCGATGACATCCGTTTCGGATCATCTATCTCCGGTTCCCACGTTGCTATCGACGATATCGAAGGCGCATGGAACTCCTCCACCCAATACGAAGGTGGTAACAAAGGTCACCGTCCGGCAGTGAAAGGCGGTTACTTCCCGGTTCCACCGGTAGACTCGGCTCAGGATATTCGTTCTGAAATGTGTCTGGTGATGGAACAGATGGGTCTGGTGGTTGAAGCCCATCACCACGAAGTAGCGACTGCTGGTCAGAACGAAGTGGCTACCCGCTTCAATACCATGACCAAAAAAGCTGACGAAATTCAGATCTACAAATATGTTGTGCACAACGTAGCGCACCGCTTCGGTAAAACCGCGACCTTTATGCCAAAACCGATGTTCGGTGATAACGGCTCCGGTATGCACTGCCACATGTCTCTGTCTAAAAACGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTGTACTACATTGGCGGCGTAATCAAACACGCTAAAGCGATTAACGCCCTGGCAAACCCGACCACCAACTCTTATAAGCGTCTGGTCCCGGGCTATGAAGCACCGGTAATGCTGGCTTACTCTGCGCGTAACCGTTCTGCGTCTATCCGTATTCCGGTGGTTTCTTCTCCGAAAGCACGTCGTATCGAAGTACGTTTCCCGGATCCGGCAGCTAACCCGTACCTGTGCTTTGCTGCCCTGCTGATGGCCGGTCTTGATGGTATCAAGAACAAGATCCATCCGGGCGAAGCCATGGACAAAAACCTGTATGACCTGCCGCCAGAAGAAGCGAAAGAGATCCCACAGGTTGCAGGCTCTCTGGAAGAAGCACTGAACGAACTGGATCTGGACCGCGAGTTCCTGAAAGCCGGTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCGCGTGCGTATGACTCCGCATCCGGTAGAGTTTGAGCTGTACTACAGCGTCTAA", + "dna_sequence_length": 1410, + "functions": [ + "glutamine synthetase" + ], + "id": "CDS_3799", + "location": [ + [ + "NC_000913", + 4058034, + "-", + 1410 + ] + ], + "md5": "c478f524c220ae8ef97955ddc3e0e1c8", + "parent_gene": "", + "protein_md5": "db66e6214ba9e9524ecbc161094c8675", + "protein_translation": "MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSKNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV", + "protein_translation_length": 469, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012648" + ], + [ + "gene_synonym", + "ECK3864" + ], + [ + "gene_synonym", + "EcoGene:EG11837" + ], + [ + "gene_synonym", + "GI:49176434" + ], + [ + "gene_synonym", + "GeneID:948369" + ], + [ + "gene_synonym", + "JW5571" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32132" + ], + [ + "gene_synonym", + "YP_026274.1" + ], + [ + "gene_synonym", + "b3871" + ], + [ + "gene_synonym", + "bipA" + ], + [ + "gene_synonym", + "typA" + ], + [ + "gene_synonym", + "yihK" + ] + ], + "dna_sequence": "GTGATCGAAAAATTGCGTAATATCGCCATCATCGCGCACGTAGACCATGGTAAAACCACCCTGGTAGACAAGCTGCTCCAACAATCCGGTACGTTCGACTCTCGTGCCGAAACCCAAGAGCGCGTGATGGACTCCAACGATTTGGAGAAAGAGCGTGGGATTACCATCCTCGCGAAAAACACCGCTATCAAATGGAATGATTACCGTATCAACATCGTTGATACCCCGGGGCACGCCGACTTCGGTGGTGAAGTTGAACGTGTAATGTCCATGGTAGACTCAGTGCTGCTGGTGGTTGACGCATTTGACGGCCCGATGCCGCAAACGCGCTTCGTAACCAAAAAAGCGTTTGCTTACGGCCTGAAGCCGATTGTTGTTATCAACAAAGTTGACCGCCCTGGCGCGCGTCCTGATTGGGTTGTGGATCAGGTATTCGATCTGTTCGTTAACCTCGACGCGACCGACGAGCAGCTGGACTTCCCGATCGTTTACGCTTCTGCGCTGAACGGTATCGCGGGTCTGGACCACGAAGATATGGCGGAAGACATGACCCCGCTGTACCAGGCGATTGTTGACCACGTTCCTGCGCCGGACGTTGACCTTGACGGTCCGTTCCAGATGCAGATTTCTCAGCTCGATTACAACAGCTATGTTGGCGTTATCGGCATTGGCCGCATCAAGCGCGGTAAAGTGAAGCCGAACCAGCAGGTCACTATCATCGATAGCGAAGGCAAAACCCGCAACGCGAAAGTCGGTAAAGTGCTGGGCCACCTCGGTCTGGAACGTATCGAAACCGATCTGGCGGAAGCTGGCGATATCGTTGCGATCACGGGCCTTGGCGAACTGAACATTTCTGACACCGTTTGCGACACGCAAAACGTTGAAGCGCTGCCGGCACTCTCCGTTGATGAGCCGACCGTTTCTATGTTCTTCTGCGTTAACACCTCGCCGTTCTGCGGTAAAGAAGGTAAGTTCGTAACGTCTCGTCAGATCCTGGATCGTCTGAACAAAGAACTGGTACACAACGTTGCGCTGCGCGTAGAAGAAACCGAAGACGCCGATGCGTTCCGCGTTTCTGGTCGTGGCGAACTGCACCTGTCTGTTCTGATCGAAAACATGCGTCGTGAAGGTTTCGAACTGGCGGTATCCCGTCCGAAAGTTATCTTCCGTGAAATCGACGGTCGTAAACAAGAGCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTGATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGCGTACTGATCTCTAACGGTCAGGGTAAAGCGGTCGCGTTCGCGCTGTTCGGTCTGCAGGATCGCGGTAAGCTGTTCCTCGGTCACGGTGCAGAAGTTTACGAAGGTCAGATTATCGGTATTCATAGCCGCTCTAACGACCTGACTGTAAACTGCCTGACCGGTAAGAAACTGACCAACATGCGTGCTTCCGGTACTGACGAAGCCGTTGTTCTGGTTCCGCCTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAA", + "dna_sequence_length": 1824, + "functions": [ + "GTP-binding protein" + ], + "id": "CDS_3800", + "location": [ + [ + "NC_000913", + 4058407, + "+", + 1824 + ] + ], + "md5": "aee4f604ff49acd4394a79c839fd26bc", + "parent_gene": "", + "protein_md5": "2807b230fcc1f2c9acd0e0d31cd3fcf3", + "protein_translation": "MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDD", + "protein_translation_length": 607, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012651" + ], + [ + "gene_synonym", + "ECK3865" + ], + [ + "gene_synonym", + "EcoGene:EG11838" + ], + [ + "gene_synonym", + "GI:16131712" + ], + [ + "gene_synonym", + "GeneID:948368" + ], + [ + "gene_synonym", + "JW3843" + ], + [ + "gene_synonym", + "NP_418308.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACM9" + ], + [ + "gene_synonym", + "b3872" + ], + [ + "gene_synonym", + "yihL" + ] + ], + "dna_sequence": "ATGGCGGAGAATCAATCCACCGTAGAAAATGCAAAAGAGAAACTGGATCGGTGGTTGAAAGATGGCATCACCACGCCGGGTGGAAAACTCCCTTCAGAAAGAGAGCTGGGAGAACTGCTGGGCATTAAACGTATGACGCTGCGCCAGGCGTTGTTGAACCTCGAGGCAGAATCCAAAATCTTCCGTAAGGATCGTAAGGGGTGGTTCGTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGGGGGCGCTGGAAGGACATAAAGTTTTCTATCACGAAACATATATTAATCCTGAAGTTGCTCCGGGCTTTATTGAACAACTTGAAAACCACTCATTTTCTGCAGTCTGGGAAAAGTGCTACCAAAAAGAGACGGTAGTAAAAAAATTGATTTTCAAACCCGTCAGAATGCCGGGCGATATCAGCAAGTATCTTGGCGGTTCTGCGGGTATGCCAGCGATCTTAATTGAAAAGCATCGCGCCGACCAGCAAGGCAATATTGTCCAAATAGATATTGAATATTGGCGATTTGAGGCCGTAGACCTCATCATTAATCTGTAG", + "dna_sequence_length": 711, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3801", + "location": [ + [ + "NC_000913", + 4060447, + "+", + 711 + ] + ], + "md5": "5e90e6c2d1545fd8c809cfbd5bf896d1", + "parent_gene": "", + "protein_md5": "5001e585b1305abd33ffad482938cdf2", + "protein_translation": "MAENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKIFRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGFTEKNRTSDIPETLAPLIAVTPSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLENHSFSAVWEKCYQKETVVKKLIFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012653" + ], + [ + "gene_synonym", + "ECK3866" + ], + [ + "gene_synonym", + "EcoGene:EG11839" + ], + [ + "gene_synonym", + "GI:16131713" + ], + [ + "gene_synonym", + "GeneID:948367" + ], + [ + "gene_synonym", + "JW3844" + ], + [ + "gene_synonym", + "NP_418309.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32134" + ], + [ + "gene_synonym", + "b3873" + ], + [ + "gene_synonym", + "yihM" + ] + ], + "dna_sequence": "ATGGTGACAATAAATAACGCAAGAAAGATTCTACAACGTGTCGACACTCTTCCTCTTTATTTACATGCTTATGCCTTTCATTTAAATATGCGGCTGGAAAGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGCGACGTATTATCGATTATCGCTAACGACATTGCCTATGTACGGGAAACGTATCAGGACAGCGGCCTGACTTTTACGATCGAGCAGCATGAAGATTTAAAAAGTCATGAGCTGGTGTCGCTGGTCAAAGAAAGTGAGATGGAATCTCTTTCCTTACTGTTTGATTTTGCGAACATGATCAATGCAAATGAGCATCCCATCGACGCTTTAAAAACGATGGCACCGCATATTACCCAGGTCCATATCAAAGATGCCTTGATCGTTAAAGAACCGGGTGGCCTGGGTCATAAAGCCTGTATTTCAGGTCAGGGTGATATGCCGTTCAAAGCGTTATTAACGCACCTTATCTGCCTGGGTGATGATGAGCCGCAGGTGACGGCATATGGCCTGGAAGAAGAGGTTGATTACTATGCGCCGGCGTTCCGCTTTGAAGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGCGGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAA", + "dna_sequence_length": 981, + "functions": [ + "putative sugar phosphate isomerase" + ], + "id": "CDS_3802", + "location": [ + [ + "NC_000913", + 4061165, + "+", + 981 + ] + ], + "md5": "b8715118c629bf654d4af6e514766a29", + "parent_gene": "", + "protein_md5": "bb3ff00a8814874d13f7e84d961e5e68", + "protein_translation": "MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012656" + ], + [ + "gene_synonym", + "ECK3867" + ], + [ + "gene_synonym", + "EcoGene:EG11840" + ], + [ + "gene_synonym", + "GI:16131714" + ], + [ + "gene_synonym", + "GeneID:948365" + ], + [ + "gene_synonym", + "JW3845" + ], + [ + "gene_synonym", + "NP_418310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32135" + ], + [ + "gene_synonym", + "b3874" + ], + [ + "gene_synonym", + "yihN" + ] + ], + "dna_sequence": "ATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAATAGCGAACAACAAGGTCGGTTGTTTGGCTTCTTCGAAACAGGGCGTGGCATTGTCGATACCGTGGTGGCATTTTCTGCGTTGGCAGTATTTACCTGGTTTGGCAGTGGCTTATTAGGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAATATCTATGCTACACCTTTATCATTAGTACCGCTGCGCTCGTACTGTTGATTATGCTGCCGCACGAAAGTATGCCGGTCTATTTAGGGATGGCATGTACGCTGGGCTTTGGCGCGATAGTCTTTACACAGCGAGCCGTATTTTTTGCACCTATCGGCGAAGCAAAAATTGCTGAAAATAAAACAGGTGCGGCGATGGCGTTGGGTAGCTTTATTGGTTACGCTCCGGCGATGTTCTGCTTCAGTCTGTATGGCTACATTCTGGATTTAAATCCGGGGATTATTGGCTACAAAATCGTGTTTGGCATTATGGCCTGCTTCGCATTCAGTGGTGCGGTGGTTTCCGTAATGCTGGTTAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAA", + "dna_sequence_length": 1266, + "functions": [ + "MFS transporter family protein" + ], + "id": "CDS_3803", + "location": [ + [ + "NC_000913", + 4062247, + "+", + 1266 + ] + ], + "md5": "7da45241369f410b799b424478fd640b", + "parent_gene": "", + "protein_md5": "e18d7354ad3b11036c819aa03d24cc9c", + "protein_translation": "MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKEMLAAEA", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012659" + ], + [ + "gene_synonym", + "ECK3868" + ], + [ + "gene_synonym", + "EcoGene:EG13374" + ], + [ + "gene_synonym", + "GI:16131715" + ], + [ + "gene_synonym", + "GeneID:948366" + ], + [ + "gene_synonym", + "JW3846" + ], + [ + "gene_synonym", + "NP_418311.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76773" + ], + [ + "gene_synonym", + "b3875" + ], + [ + "gene_synonym", + "ompL" + ], + [ + "gene_synonym", + "yshA" + ] + ], + "dna_sequence": "ATGAAAAAGATTAATGCAATAATTTTATTATCTTCTCTGACCTCTGCCTCGGTATTTGCTGGCGCATACGTCGAAAACAGGGAGGCATATAATCTTGCCTCCGATCAGGGCGAGGTTATGCTACGTGTGGGTTATAACTTCGATATGGGCGCGGGTATTATGTTAACCAATACCTACAACTTTCAGCGAGAAGATGAACTAAAACATGGATATAACGAAATTGAAGGCTGGTATCCGTTATTTAAACCAACCGATAAATTAACCATCCAGCCCGGTGGCTTAATTAATGATAAGAGTATCGGTTCGGGTGGTGCAGTGTATCTGGACGTCAACTATAAATTTGTACCATGGTTTAATCTGACAGTACGAAATCGCTATAACCATAATAACTATAGTTCAACAGATTTGAGCGGGGAACTGGATAATAATGACACCTATGAAATTGGCACCTACTGGAATTTTAAAATCACCGATAAATTTTCCTATACATTTGAGCCACATTACTTCATGCGAGTGAATGACTTTAATAGTAGCAACGGGAAAGATCATCATTGGGAAATCACTAACACCTTCCGTTACCGTATTAATGAACACTGGCTCCCTTATTTCGAATTGCGCTGGTTAGACCGCAACGTCGAACCGTACCACCGCGAGCAAAACCAGATCCGTATCGGGACGAAGTATTTCTTCTGA", + "dna_sequence_length": 693, + "functions": [ + "outer membrane porin L", + "putative sulpholipid porin" + ], + "id": "CDS_3804", + "location": [ + [ + "NC_000913", + 4064295, + "-", + 693 + ] + ], + "md5": "fa68008fd664532ecd2008f7a04ca145", + "parent_gene": "", + "protein_md5": "56bb9020f9846dbe60628623abc4d00e", + "protein_translation": "MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012661" + ], + [ + "gene_synonym", + "ECK3869" + ], + [ + "gene_synonym", + "EcoGene:EG11841" + ], + [ + "gene_synonym", + "GI:49176435" + ], + [ + "gene_synonym", + "GeneID:948377" + ], + [ + "gene_synonym", + "JW5852" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32136" + ], + [ + "gene_synonym", + "YP_026275.1" + ], + [ + "gene_synonym", + "b3876" + ], + [ + "gene_synonym", + "squO" + ], + [ + "gene_synonym", + "yihO" + ] + ], + "dna_sequence": "ATGTCTGACCATAATCCACTGACATTAAAACTGAATCTGCGGGAAAAAATCGCCTATGGTATGGGCGACGTCGGTTCGAATTTAATGCTCTGCATCGGTACTCTGTATCTCCTCAAATTTTATACCGATGAATTAGGGATGCCTGCTTACTATGGCGGGATTATCTTTCTGGTGGCGAAGTTTTTTACCGCGTTTACCGATATGCTCACCGGATTTTTACTCGACTCGCGGAAAAATATTGGGCCTAAAGGCAAATTTCGTCCCTTTATTTTATATGCAGCGGTTCCGGCGGCGTTAATTGCAACGCTCCAGTTTATCGCCACCACCTTTTGTTTGCCGGTTAAAACGACGATTGCCACCGCGCTGTTTATGATGTTTGGACTTTCATACAGTCTGATGAACTGCTCGTATGGTGCGATGATCCCGGCAATTACCAAAAACCCGAATGAGCGCGCGCAGCTCGCGGCTTACCGCCAGGGTGGTGCAACCATAGGGCTATTGATTTGTACCGTGGCGTTTATTCCGTTGCAGTCGCTTTTTTCTGACTCAACCGTCGGTTATGCCTGTGCGGCACTTATGTTCTCCATTGGCGGCTTTATTTTTATGATGCTGTGCTACAGAGGCGTCAAAGAGCATTATGTGGACACAACGCCAACCGGACATAAAGCCAGTATTCTCAAATCATTTTGCGCGATATTTCGGAATCCGCCATTGCTGGTTTTATGCATTGCTAACTTGTGTACCCTGGCGGCATTTAATATCAAACTGGCGATTCAGGTCTATTACACCCAGTATGTGCTGAATGATATTAATTTATTGTCGTGGATGGGATTCTTCAGTATGGGATGCATCCTCATCGGCGTATTACTGGTGCCATTAACTGTAAAATGTTTTGGTAAAAAACAGGTTTATCTGGCTGGCATGGTGCTGTGGGCGGTGGGTGATATACTGAATTATTTCTGGGGAAGTAACTCTTTCACTTTCGTCATGTTCTCTTGTGTCGCCTTTTTTGGCACGGCCTTTGTAAACAGCCTGAACTGGGCACTGGTACCAGATACCGTAGATTACGGTGAATGGAAAACCGGTATTCGTGCCGAAGGTTCTGTTTATACCGGTTATACCTTCTTTCGTAAAATTTCTGCCGCACTTGCTGGCTTCTTGCCAGGCATTATGCTGACGCAAATTGGTTATGTTCCCAACATCGCGCAAAGCGATGCGACATTACAGGGTTTGCGTCAGCTCATTTTTATCTGGCCTTGTGCACTGGCAATTATTGCTGCATTGACGATGGGATTCTTTTACACACTCAATGAAAAACGGTTTGCATTGATTATTGAGGAAATCAACCAACGCAAAAATAAAGAGATGGCGACAGAAGAAAAAACGGCTTCCGTAACGTTATAA", + "dna_sequence_length": 1404, + "functions": [ + "putative sulphoquinovose importer" + ], + "id": "CDS_3805", + "location": [ + [ + "NC_000913", + 4065766, + "-", + 1404 + ] + ], + "md5": "f64eaeadf437895a552949bbecc2e798", + "parent_gene": "", + "protein_md5": "88a5d2b1978bfe72c6b521d901c6032a", + "protein_translation": "MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012664" + ], + [ + "gene_synonym", + "ECK3870" + ], + [ + "gene_synonym", + "EcoGene:EG11842" + ], + [ + "gene_synonym", + "GI:145698335" + ], + [ + "gene_synonym", + "GeneID:948371" + ], + [ + "gene_synonym", + "JW3848" + ], + [ + "gene_synonym", + "NP_418313.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32137" + ], + [ + "gene_synonym", + "b3877" + ], + [ + "gene_synonym", + "squP" + ], + [ + "gene_synonym", + "yihP" + ] + ], + "dna_sequence": "ATGAGTCACATCACAACGGAAGATCCAGCAACTTTACGCCTGCCCTTTAAAGAGAAACTCTCTTACGGTATTGGCGACCTGGCCTCTAACATCCTGCTGGATATCGGTACGCTTTATCTTTTGAAGTTTTATACCGACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTATCTTTTTGATTTCAAAATTCTTTACTGCGTTTACCGATATGGGTACCGGCATTATGTTGGATTCCCGACGCAAGATCGGTCCAAAAGGTAAGTTCCGTCCTTTTATTCTGTATGCGTCATTCCCGGTCACCTTACTGGCGATCGCCAACTTTGTCGGCACACCGTTTGATGTCACCGGTAAAACGGTGATGGCCACTATTCTGTTTATGCTTTACGGACTGTTTTTCAGCATGATGAACTGCTCCTACGGCGCAATGGTTCCCGCTATCACCAAAAACCCCAACGAACGCGCCTCACTGGCGGCATGGCGTCAGGGCGGCGCTACGCTGGGCCTGCTGCTGTGCACGGTGGGATTCGTGCCAGTTATGAATCTTATCGAAGGTAATCAGCAACTTGGCTATATCTTCGCCGCCACGCTGTTTTCACTGTTTGGCCTGCTGTTTATGTGGATCTGCTACTCGGGCGTGAAAGAGCGTTATGTCGAAACCCAGCCTGCTAATCCGGCGCAAAAGCCGGGCCTGCTGCAATCTTTCCGCGCAATTGCGGGTAACCGCCCGCTGTTCATTCTGTGCATTGCCAACCTCTGCACTTTAGGGGCGTTTAACGTCAAGCTCGCCATCCAGGTCTATTACACCCAGTACGTGCTTAACGATCCCATCCTGTTGTCGTATATGGGATTTTTCAGCATGGGCTGTATTTTCATCGGCGTATTCCTGATGCCTGCCTCAGTCAGACGTTTTGGCAAGAAGAAAGTTTATATCGGCGGCCTGCTGATTTGGGTGCTGGGCGATCTGCTCAACTATTTCTTCGGCGGCGGTTCGGTCAGCTTCGTGGCGTTCTCCTGCCTGGCGTTCTTTGGCTCAGCGTTTGTTAACAGCCTGAACTGGGCGCTGGTTTCCGACACCGTCGAGTACGGCGAGTGGCGCACCGGCGTGCGTTCGGAAGGAACGGTCTACACCGGTTTTACCTTCTTTCGCAAAGTGTCTCAGGCGCTGGCTGGTTTCTTCCCCGGCTGGATGCTGACGCAAATTGGCTATGTGCCGAACGTCGCACAGGCTGACCACACCATTGAAGGGTTACGCCAGTTGATCTTCATCTACCCAAGCGCACTGGCGGTAGTCACCATTGTGGCGATGGGTTGCTTCTACAGCCTGAACGAGAAGATGTATGTCCGCATTGTGGAAGAGATAGAAGCCCGTAAACGCACGGCGTAA", + "dna_sequence_length": 1386, + "functions": [ + "putative 2,3-dihydroxypropane-1-sulphonate exporter, membrane protein" + ], + "id": "CDS_3806", + "location": [ + [ + "NC_000913", + 4067194, + "-", + 1386 + ] + ], + "md5": "f8a15944a6ceff77a71979145432acda", + "parent_gene": "", + "protein_md5": "279189db22aff17993d99c30a3a90f63", + "protein_translation": "MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA", + "protein_translation_length": 461, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012666" + ], + [ + "gene_synonym", + "ECK3871" + ], + [ + "gene_synonym", + "EcoGene:EG11843" + ], + [ + "gene_synonym", + "GI:16131718" + ], + [ + "gene_synonym", + "GeneID:948376" + ], + [ + "gene_synonym", + "JW3849" + ], + [ + "gene_synonym", + "NP_418314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32138" + ], + [ + "gene_synonym", + "b3878" + ], + [ + "gene_synonym", + "squQ" + ], + [ + "gene_synonym", + "yihQ" + ] + ], + "dna_sequence": "ATGGATACGCCACGTCCACAGTTATTAGATTTTCAATTTCATCAGAATAACGACAGTTTTACCCTACATTTTCAACAACGTCTTATTTTAACCCATAGCAAAGATAATCCTTGTTTATGGATTGGCTCAGGTATAGCGGATATCGATATGTTCCGCGGTAATTTCAGCATTAAAGATAAACTACAGGAGAAAATTGCGCTTACCGACGCCATCGTCAGCCAGTCACCGGATGGTTGGTTAATTCATTTCAGCCGTGGTTCTGACATTAGCGCCACGCTGAATATCTCTGCCGACGATCAGGGGCGTTTATTGCTGGAACTACAAAACGACAACCTTAACCACAACCGTATCTGGCTGCGCCTTGCCGCTCAACCAGAGGACCATATCTACGGCTGCGGCGAACAGTTTTCCTACTTCGATCTGCGTGGCAAACCGTTCCCGCTATGGACCAGTGAACAAGGCGTTGGTCGCAACAAACAAACCTATGTCACCTGGCAGGCCGACTGCAAAGAAAATGCGGGCGGCGACTATTACTGGACTTTCTTCCCACAGCCTACGTTTGTCAGCACGCAGAAGTATTACTGCCATGTTGATAACAGTTGCTATATGAACTTCGACTTTAGTGCCCCGGAATACCATGAACTGGCGCTGTGGGAAGACAAAGCAACGCTGCGTTTTGAATGTGCTGACACATACATTTCCCTGCTGGAAAAATTAACCGCCCTGCTGGGACGCCAGCCAGAACTGCCCGACTGGATTTATGACGGAGTAACGCTCGGCATTCAGGGCGGGACGGAAGTGTGCCAGAAGAAACTGGACACCATGCGTAACGCGGGCGTGAAGGTCAACGGCATCTGGGCGCAGGACTGGTCCGGTATTCGTATGACCTCTTTTGGCAAACGCGTGATGTGGAACTGGAAGTGGAACAGCGAAAACTACCCGCAACTGGATTCACGCATTAAGCAGTGGAATCAGGAGGGCGTGCAGTTCCTGGCCTATATCAACCCGTATGTTGCCAGCGATAAAGATCTCTGCGAAGAAGCGGCACAACACGGCTATCTGGCAAAAGATGCCTCTGGCGGTGACTATCTGGTGGAGTTTGGCGAGTTTTACGGCGGCGTTGTCGATCTCACTAATCCAGAAGCCTACGCCTGGTTCAAGGAAGTGATCAAAAAGAACATGATTGAACTCGGCTGCGGCGGCTGGATGGCTGACTTCGGCGAGTATCTGCCCACCGACACGTACTTGCATAACGGCGTCAGTGCCGAAATTATGCATAACGCCTGGCCTGCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAGAACGTCGACTGGAGTCTCGACGATGGCCTGGCGTCGGTTGTCCCGGCGGCGCTGTCGCTGGCAATGACCGGACATGGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTGGTGCGATTTCAGCGCCTTCACGCCGATGATGCGCACCCACGAAGGTAACCGTCCTGGCGACAACTGGCAGTTTGACGGCGACGCAGAAACCATCGCCCATTTCGCCCGTATGACCACCGTCTTCACCACCCTGAAACCTTACCTGAAAGAGGCCGTCGCGCTGAATGCGAAGTCCGGCCTGCCGGTTATGCGCCCGCTGTTCCTGCATTACGAAGACGATGCGCACACTTACACCCTGAAATATCAGTACCTGTTAGGTCGCGACATTCTGGTCGCTCCGGTGCATGAAGAAGGCCGTAGCGACTGGACGCTCTATCTGCCGGAGGATAACTGGGTCCACGCCTGGACGGGTGAAGCGTTCCGGGGCGGGGAAGTTACCGTTAATGCGCCCATCGGCAAGCCGCCGGTCTTTTATCGCGCCGATAGCGAATGGGCGGCACTGTTCGCGTCGTTAAAAAGCATCTAA", + "dna_sequence_length": 2037, + "functions": [ + "putative sulpholipid alpha-glucosidase", + "alpha-glucosyl fluoride glucosidase" + ], + "id": "CDS_3807", + "location": [ + [ + "NC_000913", + 4069276, + "-", + 2037 + ] + ], + "md5": "d3035616f60aea29e8a48e984b55f2dd", + "parent_gene": "", + "protein_md5": "d1c81df8e1d1f0037390b2b97eb175d7", + "protein_translation": "MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLTALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRIKQWNQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLKSI", + "protein_translation_length": 678, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012669" + ], + [ + "gene_synonym", + "ECK3872" + ], + [ + "gene_synonym", + "EcoGene:EG11844" + ], + [ + "gene_synonym", + "GI:49176437" + ], + [ + "gene_synonym", + "GeneID:948375" + ], + [ + "gene_synonym", + "JW3850" + ], + [ + "gene_synonym", + "NP_418315.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32139" + ], + [ + "gene_synonym", + "b3879" + ], + [ + "gene_synonym", + "squR" + ], + [ + "gene_synonym", + "yihR" + ] + ], + "dna_sequence": "ATGTCGTTAATTAAGGTGCCTTGTATGCAAATCACCAATATGCATTGCAGTGGACAGACCGTTTCACTTGCCGCGGGGGATTATCACGCGACCATTGTGACCGTCGGTGCTGGTCTGGCTGAATTAACCTTTCAGGGTTGTCATTTAGTCATCCCGCACAAACCCGAAGAGATGCCGCTGGCGCATCTGGGTAAAGTGCTTATTCCGTGGCCGAACCGGATCGCCAACGGCTGTTACCGCTATCAGGGGCAGGAATATCAGTTACCCATTAATGAACATAGTTCAAAAGCCGCTATTCACGGGCTGCTTGCCTGGCGAGACTGGCAAATTAGTGAATTAACCGCCACCAGCGTTACCCTGACAGCTTTTCTGCCGCCCAGTTACGGCTATCCGTTTATGCTGGCTTCACAAGTTGTTTATTCGCTCAACGCACACACGGGTCTTTCCGTTGAGATCGCAAGCCAGAATATCGGCACTGTCGCAGCGCCTTATGGCGTGGGTATTCATCCTTATTTAACCTGCAACTTAACATCTGTTGATGAATATCTGTTCCAGCTTCCGGCAAACCAGGTTTATGCCGTCGATGAGCACGCGAATCCGACAACGCTTCACCACGTTGATGAGCTGGATTTAAATTTCACGCAGGCGAAAAAAATAGCCGCGACAAAAATCGACCACACCTTTAAAACCGCTAATGATTTGTGGGAAATGACCATTACCCATCCACAGCAGGCGCTTTCGGTAAGCCTTTGTTCCGATCAACTCTGGGTGCAGGTTTATAGCGGTGAAAAATTACAGCGTCAGGGACTGGCAGTTGAACCTATGAGTTGCCCGCCTAACGCCTTTAATTCAGGTATCGACTTATTATTACTGGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAAATAA", + "dna_sequence_length": 927, + "functions": [ + "putative sulphoquinovose mutarotase" + ], + "id": "CDS_3808", + "location": [ + [ + "NC_000913", + 4070401, + "-", + 927 + ] + ], + "md5": "fc61b1321beca015e4ed81788e24f5d9", + "parent_gene": "", + "protein_md5": "a48761ec0424bffbccb1f5fcda6e7a6d", + "protein_translation": "MSLIKVPCMQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIPHKPEEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQISELTATSVTLTAFLPPSYGYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHPYLTCNLTSVDEYLFQLPANQVYAVDEHANPTTLHHVDELDLNFTQAKKIAATKIDHTFKTANDLWEMTITHPQQALSVSLCSDQLWVQVYSGEKLQRQGLAVEPMSCPPNAFNSGIDLLLLESGKPHRLFFNIYGQRK", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012673" + ], + [ + "gene_synonym", + "ECK3873" + ], + [ + "gene_synonym", + "EcoGene:EG11845" + ], + [ + "gene_synonym", + "GI:90111658" + ], + [ + "gene_synonym", + "GeneID:948374" + ], + [ + "gene_synonym", + "JW5569" + ], + [ + "gene_synonym", + "NP_418316.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32140" + ], + [ + "gene_synonym", + "b3880" + ], + [ + "gene_synonym", + "manC?" + ], + [ + "gene_synonym", + "squS" + ], + [ + "gene_synonym", + "yihS" + ] + ], + "dna_sequence": "ATGAAATGGTTTAACACCCTAAGCCACAACCGTTGGCTGGAACAGGAAACCGACCGCATCTTTGATTTTGGTAAAAATTCCGTAGTGCCGACTGGTTTTGGCTGGTTAGGCAATAAAGGGCAAATCAAAGAAGAGATGGGCACCCATCTGTGGATCACCGCTCGTATGTTGCACGTTTATTCCGTTGCTGCGGCGATGGGTCGACCTGGCGCTTACTCGTTGGTTGATCACGGTATCAAAGCCATGAACGGCGCACTGCGTGATAAAAAATATGGCGGCTGGTATGCCTGCGTGAATGACGAGGGCGTGGTGGATGCCTCCAAACAGGGCTATCAACACTTCTTTGCTCTGCTGGGTGCCGCCAGCGCCGTCACAACGGGTCACCCGGAAGCGCGCAAGCTGCTCGATTACACCATTGAAATTATCGAGAAATATTTCTGGAGCGAAGAAGAGCAGATGTGCCTGGAATCCTGGGACGAAGCCTTCAGCAAAACCGAAGAGTACCGCGGCGGCAATGCCAATATGCACGCGGTGGAAGCTTTCTTGATTGTTTATGACGTCACTCACGACAAAAAATGGCTGGATCGCGCGATTCGCGTGGCTTCCGTGATTATCCACGACGTCGCCAGAAATAATCATTATCGCGTTAACGAACACTTCGATACCCAGTGGAATCCGCTGCCGGATTACAACAAAGATAACCCGGCGCATCGCTTCCGCGCGTTCGGAGGTACACCAGGCCACTGGATCGAATGGGGCCGTTTAATGCTGCACATCCATGCTGCCCTGGAAGCCCGTTGCGAACAACCACCAGCATGGCTGCTAGAAGATGCCAAAGGTCTGTTTAACGCCACCGTGCGCGATGCCTGGGCACCCGATGGCGCGGACGGGATTGTTTATACCGTTGACTGGGAAGGAAAACCGGTGGTCCGCGAACGTGTACGTTGGCCTATCGTCGAAGCAATGGGTACGGCCTACGCGCTCTACACCGTCACTGGCGATCGCCAGTATGAAACCTGGTATCAAACATGGTGGGAGTACTGCATTAAGTACCTGATGGACTATGAAAATGGTTCCTGGTGGCAGGAGCTGGATGCGGACAATAAGGTCACCACCAAAGTCTGGGACGGCAAACAGGATATTTATCACCTGCTGCATTGCCTGGTGATCCCGCGTATCCCGTTAGCGCCCGGCATGGCTCCAGCGGTTGCAGCGGGTCTGCTGGATATTAATGCGAAATAA", + "dna_sequence_length": 1242, + "functions": [ + "sulphoquinovose isomerase" + ], + "id": "CDS_3809", + "location": [ + [ + "NC_000913", + 4071756, + "-", + 1242 + ] + ], + "md5": "2ad8bced8bed8ecbae4b89e94350e45d", + "parent_gene": "", + "protein_md5": "0ba5f9fdc6b633ff40b7eae9da99ac0f", + "protein_translation": "MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012675" + ], + [ + "gene_synonym", + "ECK3874" + ], + [ + "gene_synonym", + "EcoGene:EG11846" + ], + [ + "gene_synonym", + "GI:16131721" + ], + [ + "gene_synonym", + "GeneID:948373" + ], + [ + "gene_synonym", + "JW3852" + ], + [ + "gene_synonym", + "NP_418317.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32141" + ], + [ + "gene_synonym", + "b3881" + ], + [ + "gene_synonym", + "squT" + ], + [ + "gene_synonym", + "yihT" + ] + ], + "dna_sequence": "ATGAATAAGTACACCATCAACGACATTACGCGCGCATCGGGCGGTTTTGCCATGCTGGCGGTCGATCAGCGCGAAGCCATGCGCATGATGTTTGCCGCGGCTGGGGCACCCGCTCCGGTAGCCGATAGCGTTTTAACTGATTTCAAAGTTAACGCTGCAAAGGCCCTCTCGCCTTATGCCTCGGCGATTCTGGTAGATCAACAATTCTGCTACCGCCAGGTGGTTGAGCAAAACGCGATTGCCAAAAGTTGCGCCATGATTGTCGCCGCCGATGAGTTCATTCCTGGCAACGGTATTCCGGTCGATAGCGTGGTTATTGACCGCAAAATCAATCCGCTACAGATCAAACAAGACGGTGGCAAAGCCTTAAAACTGCTGGTGCTGTGGCGTAGTGATGAAGATGCGCAGCAACGTCTGGATATGGTGAAAGAGTTCAACGAACTGTGCCACTCACACGGTCTGGTAAGCATCATTGAGCCAGTCGTCCGCCCACCGCGTCGTGGCGATAAATTCGATCGCGAACAAGCGATCATCGATGCCGCCAAAGAGCTGGGCGACAGTGGCGCTGACCTCTACAAAGTTGAAATGCCGCTTTATGGCAAAGGTCCGCAACAAGAGCTTCTCTGTGCTTCACAACGTCTGAATGACCATATCAATATGCCATGGGTGATCCTCTCTTCCGGTGTCGACGAAAAACTGTTCCCGCGTGCCGTACGCGTGGCAATGACGGCGGGCGCATCGGGATTCCTGGCAGGCCGTGCAGTCTGGGCATCGGTCGTCGGTTTACCAGACAACGAGCTGATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCCGCTAA", + "dna_sequence_length": 879, + "functions": [ + "6-deoxy-6-sulphofructose-1-phosphate aldolase" + ], + "id": "CDS_3810", + "location": [ + [ + "NC_000913", + 4072651, + "-", + 879 + ] + ], + "md5": "12ac7c38439183dec2d8cf515f341491", + "parent_gene": "", + "protein_md5": "bf15a1d99361bbe58dd8eebbc691370d", + "protein_translation": "MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012678" + ], + [ + "gene_synonym", + "ECK3875" + ], + [ + "gene_synonym", + "EcoGene:EG11847" + ], + [ + "gene_synonym", + "GI:16131722" + ], + [ + "gene_synonym", + "GeneID:948372" + ], + [ + "gene_synonym", + "JW3853" + ], + [ + "gene_synonym", + "NP_418318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9V8" + ], + [ + "gene_synonym", + "b3882" + ], + [ + "gene_synonym", + "squU" + ], + [ + "gene_synonym", + "yihU" + ] + ], + "dna_sequence": "ATGGCAGCAATCGCGTTTATCGGTTTAGGACAAATGGGTTCGCCAATGGCGAGCAATTTATTGCAGCAAGGGCATCAACTTCGCGTCTTTGATGTGAACGCCGAAGCTGTGCGGCATCTGGTAGACAAAGGTGCGACTCCCGCCGCCAACCCGGCGCAGGCCGCTAAAGATGCCGAATTTATCATTACCATGTTGCCGAATGGCGATCTGGTGCGCAACGTGTTGTTCGGTGAAAACGGCGTTTGCGAAGGCTTATCTACCGATGCGCTGGTCATTGATATGTCCACCATCCATCCGCTGCAAACCGATAAATTGATTGCCGATATGCAAGCCAAAGGCTTCAGCATGATGGATGTTCCGGTAGGCCGTACTTCTGCAAATGCCATTACCGGTACTCTGTTACTGCTGGCTGGCGGCACCGCTGAACAAGTTGAACGTGCCACACCGATCCTGATGGCGATGGGCAGTGAGTTGATCAACGCTGGCGGTCCGGGCATGGGGATCCGCGTTAAGCTCATCAACAACTACATGAGCATCGCGCTCAATGCGCTTTCGGCAGAAGCCGCCGTTTTGTGCGAAGCCCTGAATCTTCCCTTCGATGTTGCCGTCAAAGTGATGAGCGGTACCGCCGCCGGTAAAGGTCACTTCACCACTTCCTGGCCAAACAAAGTCCTCAGCGGAGATCTTTCTCCCGCCTTCATGATCGATCTTGCCCATAAGGATCTTGGCATCGCCCTTGATGTCGCCAACCAGCTGCATGTGCCAATGCCGCTGGGGGCCGCCTCACGGGAGGTTTATAGCCAGGCGCGCGCAGCGGGTCGCGGTCGCCAGGACTGGTCCGCCATTCTGGAACAGGTCCGTGTCAGTGCCGGGATGACTGCCAAAGTAAAAATGTAA", + "dna_sequence_length": 897, + "functions": [ + "3-sulpholactaldehyde (SLA) reductase, NADH-dependent", + "gamma-hydroxybutyrate dehydrogenase, NADH-dependent" + ], + "id": "CDS_3811", + "location": [ + [ + "NC_000913", + 4073571, + "-", + 897 + ] + ], + "md5": "6f216d4d9d93ea9e1d9d2f4bfed483be", + "parent_gene": "", + "protein_md5": "679d405644fb92419f37416a17e37634", + "protein_translation": "MAAIAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILEQVRVSAGMTAKVKM", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012681" + ], + [ + "gene_synonym", + "ECK3876" + ], + [ + "gene_synonym", + "EcoGene:EG11848" + ], + [ + "gene_synonym", + "GI:90111659" + ], + [ + "gene_synonym", + "GeneID:948382" + ], + [ + "gene_synonym", + "JW5568" + ], + [ + "gene_synonym", + "NP_418319.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32143" + ], + [ + "gene_synonym", + "b3883" + ], + [ + "gene_synonym", + "squV" + ], + [ + "gene_synonym", + "yihV" + ] + ], + "dna_sequence": "ATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGTAGGTGATGACGACACGGGCAACAGCCTGCTGGCAGAGCTGGAATCCTGGGGCGTTAACACCCGTTACACCAAACGGTATAACCAGGCGAAATCTTCGCAATCCGCCATCATGGTGGATACCAAAGGCGAGCGGATAATCATTAACTACCCCAGCCCGGATCTGCTGCCTGACGCAGAGTGGTTGGAGGAAATTGATTTCTCTCAGTGGGATGTTGTGCTGGCAGATGTACGCTGGCACGACGGCGCTAAAAAAGCCTTCACCCTGGCCCGTCAGGCGGGTGTGATGACCGTTCTGGACGGGGACATTACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGCGTCAGCATCAACCGGCCTTCAAAGTTGATGTGGTAGATACCACAGGTGCGGGTGATGTTTTTCACGGCGCTTTGGCGGTGGCGCTGGCAACAAGTGGGGATTTAGCGGAGTCAGTCCGCTTCGCCAGCGGTGTAGCGGCGTTAAAATGCACACGTCCCGGTGGACGAGCCGGGATCCCTGACTGTGATCAAACCCGATCTTTTTTGTCACTTTTTGTATAA", + "dna_sequence_length": 897, + "functions": [ + "6-deoxy-6-sulphofructose kinase" + ], + "id": "CDS_3812", + "location": [ + [ + "NC_000913", + 4073739, + "+", + 897 + ] + ], + "md5": "7c12d6f8ebb0097c4cd945b2cb690656", + "parent_gene": "", + "protein_md5": "8bc5c80998ef9c7a679dd1e8477c4268", + "protein_translation": "MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012683" + ], + [ + "gene_synonym", + "ECK3877" + ], + [ + "gene_synonym", + "EcoGene:EG11849" + ], + [ + "gene_synonym", + "GI:90111660" + ], + [ + "gene_synonym", + "GeneID:948381" + ], + [ + "gene_synonym", + "JW5567" + ], + [ + "gene_synonym", + "NP_418320.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32144" + ], + [ + "gene_synonym", + "b3884" + ], + [ + "gene_synonym", + "squW" + ], + [ + "gene_synonym", + "yihW" + ] + ], + "dna_sequence": "ATGAGCCTTACCGAACTAACCGGTAACCCGCGGCACGACCAACTCCTCATGCTGATCGCCGAGCGTGGGTATATGAATATTGATGAGCTGGCAAATCTGCTGGATGTCTCCACGCAGACGGTCCGCCGGGATATTCGTAAATTAAGCGAGCAAGGCCTGATTACGCGCCATCACGGTGGCGCGGGTCGGGCTTCCAGCGTCGTTAATACGGCGTTCGAGCAGCGTGAGGTTTCGCAAACCGAGGAAAAAAAAGCGATTGCCGAAGCGGTGGCAGACTATATTCCTGATGGTTCAACAATATTTATCACCATTGGTACGACTGTTGAGCATGTTGCCCGGGCGTTACTTAACCATAATCATTTGCGGATAATCACCAACAGCCTGCGTGTGGCGCATATTCTTTACCACAACCCGCGCTTTGAAGTGATGGTGCCCGGCGGTACGTTGCGCTCTCATAATAGCGGGATCATTGGCCCTTCAGCGGCGTCCTTTGTGGCTGATTTTCGTGCTGATTATCTGGTAACAAGCGTTGGGGCGATTGAGAGCGATGGCGCGTTGATGGAGTTTGATGTAAACGAAGCTAACGTGGTGAAAACGATGATGGCGCACGCGAGAAATATTCTGCTGGTCGCCGATCACACTAAGTATCATGCTTCGGCGGCGGTTGAAATTGGTAACGTGGCACAGGTCACTGCGCTCTTTACCGACGAGCTGCCGCCCGCTGCGCTAAAATCACGCTTACAAGACAGCCAAATTGAAATCATTCTTCCCCAGGAAGACGCGTAG", + "dna_sequence_length": 786, + "functions": [ + "putative transcriptional regulator for sulphoquinovose utilization" + ], + "id": "CDS_3813", + "location": [ + [ + "NC_000913", + 4074669, + "+", + 786 + ] + ], + "md5": "f76ad2cc0c2a5961d3b4c3fd9c6b8dec", + "parent_gene": "", + "protein_md5": "d7a1af2d69db94e8881bbc432c17f655", + "protein_translation": "MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012686" + ], + [ + "gene_synonym", + "ECK3878" + ], + [ + "gene_synonym", + "EcoGene:EG11850" + ], + [ + "gene_synonym", + "GI:90111661" + ], + [ + "gene_synonym", + "GeneID:948380" + ], + [ + "gene_synonym", + "JW5566" + ], + [ + "gene_synonym", + "NP_418321.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Y3" + ], + [ + "gene_synonym", + "b3885" + ], + [ + "gene_synonym", + "yihX" + ] + ], + "dna_sequence": "ATGCTCTATATCTTTGATTTAGGTAATGTGATTGTCGATATCGACTTTAACCGTGTGCTGGGAGCCTGGAGCGATTTAACGCGTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCGACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTTTGTTGCGCTGCGCCCGGAAGTGATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGCTTTCCAATACCAACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAA", + "dna_sequence_length": 600, + "functions": [ + "alpha-D-glucose-1-phosphate phosphatase, anomer-specific" + ], + "id": "CDS_3814", + "location": [ + [ + "NC_000913", + 4075553, + "+", + 600 + ] + ], + "md5": "a6275ff930afd4f76a76e9bf10bd2ea5", + "parent_gene": "", + "protein_md5": "321327a274d2aeebfd71273095e7e6dc", + "protein_translation": "MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012688" + ], + [ + "gene_synonym", + "ECK3879" + ], + [ + "gene_synonym", + "EcoGene:EG11851" + ], + [ + "gene_synonym", + "GI:16131726" + ], + [ + "gene_synonym", + "GeneID:948379" + ], + [ + "gene_synonym", + "JW3857" + ], + [ + "gene_synonym", + "NP_418322.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8K8" + ], + [ + "gene_synonym", + "b3886" + ], + [ + "gene_synonym", + "rbn" + ], + [ + "gene_synonym", + "yihY" + ] + ], + "dna_sequence": "ATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTGCGCTTTTCGCCGCTTTTCCCATGTTTTCCGACGTCAGCATTCAGTTACGTCACTTTATTTTTGCCAACTTTCTGCCTGCTACTGGCGATGTTATTCAGCGGTATATCGAACAATTTGTTGCCAATTCCAACAAGATGACCGCCGTTGGGGCGTGCGGGCTGATCGTCACCGCGTTATTGTTGATGTACTCCATCGATAGCGCGTTGAATACCATCTGGCGCAGTAAACGAGCGCGACCAAAAATTTACTCGTTCGCCGTGTACTGGATGATTTTAACGCTGGGGCCGCTGCTGGCAGGGGCCAGTCTGGCGATCAGTTCCTATTTGCTCTCCCTGCGCTGGGCGAGCGATCTCAATACTGTCATCGACAACGTGCTGCGTATTTTTCCGTTGCTGTTGTCGTGGATCTCCTTCTGGTTGCTGTACAGCATTGTTCCTACCATCCGCGTACCTAACCGCGACGCGATTGTCGGCGCGTTTGTCGCCGCACTCCTGTTCGAAGCAGGAAAGAAAGGTTTCGCGCTTTATATCACCATGTTCCCGTCATATCAGCTCATTTATGGTGTGCTGGCGGTGATCCCCATTCTCTTTGTTTGGGTCTACTGGACATGGTGTATCGTCTTGCTTGGCGCGGAAATTACTGTCACTCTCGGGGAATACCGCAAACTAAAACAAGCAGCTGAACAAGAAGAAGACGACGAACCATGA", + "dna_sequence_length": 873, + "functions": [ + "BrkB family putative transporter, inner membrane protein" + ], + "id": "CDS_3815", + "location": [ + [ + "NC_000913", + 4076146, + "+", + 873 + ] + ], + "md5": "ca925d09324d13032eb29a790103f1b7", + "parent_gene": "", + "protein_md5": "2ab67f99e9eac535d94aa6e882142578", + "protein_translation": "MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMTAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQAAEQEEDDEP", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012690" + ], + [ + "gene_synonym", + "ECK3880" + ], + [ + "gene_synonym", + "EcoGene:EG11852" + ], + [ + "gene_synonym", + "GI:16131727" + ], + [ + "gene_synonym", + "GeneID:948378" + ], + [ + "gene_synonym", + "JW3858" + ], + [ + "gene_synonym", + "NP_418323.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6M4" + ], + [ + "gene_synonym", + "b3887" + ], + [ + "gene_synonym", + "dtd" + ], + [ + "gene_synonym", + "yihZ" + ] + ], + "dna_sequence": "ATGATTGCATTAATTCAACGCGTAACCCGTGCCAGCGTCACCGTGGAGGGAGAAGTGACGGGCGAAATTGGCGCGGGACTTTTGGTGTTATTGGGTGTCGAAAAGGATGACGACGAACAGAAAGCAAACCGTCTGTGCGAGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTTCGTCGAACGCTGCCGTCAGCAAGAGATGAACACGCAAACAGGACGCTTCGCTGCGGATATGCAGGTATCGCTGGTCAATGATGGCCCCGTGACATTCTGGTTGCAGGTATGA", + "dna_sequence_length": 438, + "functions": [ + "D-tyr-tRNA(Tyr) deacylase" + ], + "id": "CDS_3816", + "location": [ + [ + "NC_000913", + 4077015, + "+", + 438 + ] + ], + "md5": "8188a1b91116f09f0e74a7faff76de6c", + "parent_gene": "", + "protein_md5": "e0597917e9d119cfd9f41705c45f3e94", + "protein_translation": "MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012692" + ], + [ + "gene_synonym", + "ECK3881" + ], + [ + "gene_synonym", + "EcoGene:EG11853" + ], + [ + "gene_synonym", + "GI:16131728" + ], + [ + "gene_synonym", + "GeneID:948387" + ], + [ + "gene_synonym", + "JW3859" + ], + [ + "gene_synonym", + "NP_418324.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADQ2" + ], + [ + "gene_synonym", + "b3888" + ], + [ + "gene_synonym", + "yiiD" + ] + ], + "dna_sequence": "ATGAGCCAGCTTCCAGGGTTGTCACGGGAAACAAGAGAGAGTATCGCTATGTATCACCTTCGGGTTCCACAAACAGAAGAAGAATTAGAGCGTTACTATCAGTTTCGCTGGGAAATGTTGCGTAAGCCCCTGCATCAACCAAAAGGTTCGGAACGCGACGCGTGGGATGCGATGGCGCATCACCAGATGGTCGTCGACGAGCAGGGTAATCTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTTTTCGCCAAGCTGGGGTTTGTTAATCAGGGAGAAATCACCACGCCAACCACCACGCCGATTCGCCATTTTTTGATGATTAAGCCCGTCGCCACTCTGGATGACATTCTGCATCGCGGCGACTGGTGCGCGCAGCTGCAACAGGCGTGGTACGAACATATCCCGCTTAGTGAAAAAATGGGCGTGCGCATTCAGCAATATACCGGGCAAAAATTTATCACTACCATGCCAGAAACCGGCAATCAGAATCCGCACCATACGCTGTTTGCCGGGAGTTTATTCTCACTGGCGACGCTCACTGGTTGGGGACTTATCTGGCTGATGCTGCGTGAACGCCACCTCGGCGGAACGATTATTCTTGCGGATGCGCATATCCGCTACAGCAAGCCGATTAGCGGTAAACCTCATGCGGTAGCCGACCTCGGTGCCTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAG", + "dna_sequence_length": 990, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_3817", + "location": [ + [ + "NC_000913", + 4077449, + "+", + 990 + ] + ], + "md5": "54069560a13c9aaa5579f2ad7804535d", + "parent_gene": "", + "protein_md5": "ffc43a48b7e5b704273e2729cf55af2a", + "protein_translation": "MSQLPGLSRETRESIAMYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012696" + ], + [ + "gene_synonym", + "ECK3882" + ], + [ + "gene_synonym", + "EcoGene:EG11854" + ], + [ + "gene_synonym", + "GI:145698336" + ], + [ + "gene_synonym", + "GeneID:948386" + ], + [ + "gene_synonym", + "JW5929" + ], + [ + "gene_synonym", + "NP_418325.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADQ5" + ], + [ + "gene_synonym", + "b3889" + ], + [ + "gene_synonym", + "yiiE" + ] + ], + "dna_sequence": "ATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGTGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGA", + "dna_sequence_length": 213, + "functions": [ + "CopG family putative transcriptional regulator" + ], + "id": "CDS_3818", + "location": [ + [ + "NC_000913", + 4079297, + "+", + 213 + ] + ], + "md5": "dc202f0214af8ea0520102af428e287f", + "parent_gene": "", + "protein_md5": "447a4df39c936f98ab9973ec55c35d53", + "protein_translation": "MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012700" + ], + [ + "gene_synonym", + "ECK3883" + ], + [ + "gene_synonym", + "EcoGene:EG11855" + ], + [ + "gene_synonym", + "GI:90111663" + ], + [ + "gene_synonym", + "GeneID:948385" + ], + [ + "gene_synonym", + "JW5563" + ], + [ + "gene_synonym", + "NP_418326.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU6" + ], + [ + "gene_synonym", + "b3890" + ], + [ + "gene_synonym", + "yiiF" + ] + ], + "dna_sequence": "ATGGGCAGAATTTTACTCGATTTATCGAATGAGGTGATTAAGCAACTTGATGATCTCGAGGTGCAGCGTAATCTTCCTCGTGCGGACCTATTAAGGGAAGCGGTAGATCAATACCTGATAAATCAATCGCAAACAGCAAGAACCAGTGTTCCTGGCATCTGGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAA", + "dna_sequence_length": 219, + "functions": [ + "putative thymol sensitivity protein, CopG family putative transcriptional regulator" + ], + "id": "CDS_3819", + "location": [ + [ + "NC_000913", + 4079751, + "+", + 219 + ] + ], + "md5": "f95c197438d86d32d2e168780e679fa6", + "parent_gene": "", + "protein_md5": "313f4dd819e2ccf4f5568e43febdbc9e", + "protein_translation": "MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012703" + ], + [ + "gene_synonym", + "ECK3884" + ], + [ + "gene_synonym", + "EcoGene:EG10284" + ], + [ + "gene_synonym", + "GI:16131731" + ], + [ + "gene_synonym", + "GeneID:948384" + ], + [ + "gene_synonym", + "JW3862" + ], + [ + "gene_synonym", + "NP_418327.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13024" + ], + [ + "gene_synonym", + "b3891" + ], + [ + "gene_synonym", + "fdhE" + ] + ], + "dna_sequence": "ATGAGTATTCGCATAATCCCGCAAGATGAGCTGGGTTCAAGCGAGAAACGTACGGCGGATATGATTCCGCCGTTATTGTTCCCTCGGCTCAAGAATTTATACAACCGCCGCGCCGAGCGTCTGCGCGAGCTGGCAGAAAATAATCCTCTGGGTGATTACCTGCGCTTTGCTGCGCTTATCGCCCACGCCCAGGAAGTGGTGCTGTACGACCATCCGCTGGAGATGGATCTGACTGCGCGCATTAAAGAAGCCAGCGCACAAGGCAAGCCCCCGCTGGATATTCACGTTCTGCCGCGTGATAAGCACTGGCAAAAGCTGCTGATGGCGCTGATTGCTGAGCTGAAACCTGAAATGAGCGGCCCGGCGCTGGCAGTGATTGAGAATCTGGAGAAGGCATCGACTCAGGAGCTGGAAGATATGGCCAGCGCGCTGTTTGCCTCTGATTTCTCGTCCGTCAGCAGCGATAAAGCGCCGTTTATCTGGGCTGCACTGTCGCTCTACTGGGCGCAGATGGCCAATCTGATCCCCGGCAAAGCCCGCGCTGAATACGGCGAGCAACGTCAATATTGCCCGGTTTGTGGTTCTATGCCGGTGTCCAGCATGGTGCAAATTGGCACCACTCAGGGGCTACGTTACCTGCACTGCAACCTGTGTGAAACTGAATGGCACGTAGTGCGCGTAAAATGCAGCAACTGCGAGCAGAGCGGCAAACTGCATTACTGGTCGCTGGATGACGAACAGGCCGCGATTAAAGCCGAAAGCTGCGATGACTGCGACACTTACCTGAAAATTCTCTATCAGGAAAAAGATCCAAAAATCGAAGCCGTAGCAGATGACCTCGCCTCTCTGGTACTGGACGCACGAATGGAGCAAGAAGGCTATGCCCGCAGTTCCATCAACCCGTTCCTGTTTCCGGGTGAAGGAGAGTAA", + "dna_sequence_length": 930, + "functions": [ + "formate dehydrogenase formation protein" + ], + "id": "CDS_3820", + "location": [ + [ + "NC_000913", + 4081228, + "-", + 930 + ] + ], + "md5": "9306e1f5af21fc224f3b9a1364abf6b5", + "parent_gene": "", + "protein_md5": "e14bec50261c6f00e21da4e69f9eee3b", + "protein_translation": "MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCDTYLKILYQEKDPKIEAVADDLASLVLDARMEQEGYARSSINPFLFPGEGE", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012705" + ], + [ + "gene_synonym", + "ECK3885" + ], + [ + "gene_synonym", + "EcoGene:EG11856" + ], + [ + "gene_synonym", + "GI:16131732" + ], + [ + "gene_synonym", + "GeneID:948383" + ], + [ + "gene_synonym", + "JW3863" + ], + [ + "gene_synonym", + "NP_418328.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEL0" + ], + [ + "gene_synonym", + "b3892" + ], + [ + "gene_synonym", + "fdoI" + ] + ], + "dna_sequence": "ATGAAACGACGTGACACCATCGTGCGCTACACCGCGCCGGAACGTATCAACCACTGGATCACCGCCTTCTGCTTCATCCTGGCGGCGGTGAGCGGGCTGGGCTTTTTGTTCCCGTCCTTCAACTGGTTGATGCAAATCATGGGCACACCGCAGCTGGCGCGAATTCTGCACCCGTTTGTCGGCGTGGTTATGTTTGCCTCGTTCATCATCATGTTTTTCCGTTACTGGCATCACAACCTAATCAATCGGGATGATATCTTTTGGGCGAAGAATATTCGTAAGATCGTCGTCAACGAGGAAGTAGGTGACACCGGGCGTTATAACTTCGGTCAGAAATGCGTTTTCTGGGCGGCGATTATTTTCCTGGTTCTGCTGCTGGTGAGCGGCGTGATTATCTGGCGTCCTTATTTTGCGCCTGCTTTCTCAATCCCGGTGATCCGATTCGCGTTAATGCTGCATTCATTTGCCGCAGTGGCGTTAATTGTGGTTATCATGGTGCATATCTACGCCGCCCTTTGGGTGAAAGGCACGATTACCGCCATGGTGGAAGGATGGGTTACCAGCGCCTGGGCGAAGAAACATCACCCGCGCTGGTACCGTGAGGTCCGCAAGACAACGGAAAAGAAAGCTGAATGA", + "dna_sequence_length": 636, + "functions": [ + "formate dehydrogenase-O, cytochrome b556 subunit" + ], + "id": "CDS_3821", + "location": [ + [ + "NC_000913", + 4081860, + "-", + 636 + ] + ], + "md5": "90838caf8070bea2226dbb6383a94ca9", + "parent_gene": "", + "protein_md5": "ed29993cf859e7bc56aba9437df4de6f", + "protein_translation": "MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012708" + ], + [ + "gene_synonym", + "ECK3886" + ], + [ + "gene_synonym", + "EcoGene:EG11857" + ], + [ + "gene_synonym", + "GI:16131733" + ], + [ + "gene_synonym", + "GeneID:948395" + ], + [ + "gene_synonym", + "JW3864" + ], + [ + "gene_synonym", + "NP_418329.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ5" + ], + [ + "gene_synonym", + "b3893" + ], + [ + "gene_synonym", + "fdoH" + ] + ], + "dna_sequence": "ATGGCTTATCAATCTCAAGATATCATTCGTCGTTCCGCGACTAACGGTCTGACCCCCGCGCCTCAGGCGCGGGACTTCCAGGAAGAAGTGGCGAAACTCATCGACGTTACCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCAGAGTGGAACGACATTCGCGATACCGTCGGCAATAACATTGGGGTGTACGACAACCCCAATGATTTAAGCGCCAAATCGTGGACGGTAATGCGCTTCTCGGAAGTGGAGCAGAACGACAAACTGGAATGGCTGATCCGCAAAGACGGCTGTATGCACTGTTCCGATCCAGGCTGCCTGAAAGCGTGCCCGGCGGAAGGTGCAATTATTCAGTATGCCAACGGTATCGTCGACTTCCAGTCCGAGCAGTGCATTGGCTGCGGTTATTGCATTGCGGGCTGTCCGTTCGACATTCCGCGCCTCAACCCGGAAGACAACCGCGTCTACAAATGTACGCTGTGCGTTGACCGCGTGGTGGTTGGGCAAGAACCAGCCTGCGTGAAGACCTGCCCAACGGGCGCGATTCACTTCGGTACGAAAGAGTCGATGAAAACGCTGGCGAGCGAGCGCGTTGCTGAGCTGAAAACCCGCGGTTACGACAATGCGGGTCTGTACGATCCGGCAGGCGTCGGTGGTACACACGTCATGTACGTGCTGCACCATGCTGACAAGCCAAATCTGTATCATGGCTTGCCGGAGAACCCGGAAATCAGCGAAACCGTGAAATTCTGGAAAGGCATCTGGAAACCGCTCGCGGCTGTTGGCTTTGCGGCTACCTTTGCGGCCAGTATCTTCCACTACGTGGGTGTCGGTCCGAACCGTGCGGATGAGGAAGAGAATAATCTGCACGAAGAGAAAGACGAGGAGCGCAAATGA", + "dna_sequence_length": 903, + "functions": [ + "formate dehydrogenase-O, Fe-S subunit" + ], + "id": "CDS_3822", + "location": [ + [ + "NC_000913", + 4082759, + "-", + 903 + ] + ], + "md5": "d00b596a22cb8ec30f78528b5ea94727", + "parent_gene": "", + "protein_md5": "e5a904638cb9b4a8bcc407cc8b46856c", + "protein_translation": "MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012710" + ], + [ + "gene_synonym", + "ECK3887" + ], + [ + "gene_synonym", + "EcoGene:EG11858" + ], + [ + "gene_synonym", + "GI:16131734" + ], + [ + "gene_synonym", + "GeneID:948394" + ], + [ + "gene_synonym", + "JW3865" + ], + [ + "gene_synonym", + "NP_418330.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32176" + ], + [ + "gene_synonym", + "b3894" + ], + [ + "gene_synonym", + "fdoG" + ] + ], + "dna_sequence": "ATGCAGGTCAGCAGAAGGCAGTTCTTTAAGATCTGCGCTGGCGGTATGGCAGGCACCACGGCAGCGGCACTGGGTTTTGCACCCAGCGTAGCACTCGCGGAAACCCGGCAGTATAAACTGCTGCGCACCCGCGAAACCCGTAATACCTGCACCTATTGTTCCGTAGGCTGTGGGCTGTTGATGTACAGCCTCGGTGACGGAGCAAAAAACGCCAAAGCATCTATCTTCCATATCGAAGGCGATCCGGATCACCCGGTCAACCGCGGTGCACTTTGTCCGAAAGGCGCTGGCCTGGTGGATTTCATCCACTCCGAAAGCCGTCTGAAGTTTCCGGAATACCGTGCGCCAGGTTCTGATAAATGGCAGCAAATCAGTTGGGAAGAGGCGTTTGATCGCATCGCCAAACTGATGAAAGAAGACCGCGATGCTAACTACATTGCGCAAAACGCCGAAGGCGTGACTGTTAACCGCTGGCTCTCCACCGGGATGCTGTGTGCTTCCGCGTCGAGTAACGAAACCGGCTATTTAACGCAAAAATTCTCCCGCGCGCTGGGTATGCTCGCGGTCGACAACCAGGCGCGTGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTCGACATCAAGAACGCCAACCTCGTCGTGGTGATGGGCGGTAACGCCGCTGAAGCTCACCCGGTCGGGTTCCGCTGGGCGATGGAAGCCAAAATTCACAACGGCGCGAAGCTGATTGTGATCGATCCTCGCTTTACGCGTACGGCGGCGGTAGCTGACTACTATGCCCCTATTCGTTCCGGTACTGACATTGCTTTCCTGTCAGGCGTATTGCTGTACCTGCTGAACAATGAAAAATTCAACCGCGAATACACCGAAGCCTATACCAACGCCAGCCTGATCGTGCGTGAGGATTACGGCTTTGAAGATGGCCTGTTCACCGGCTACGACGCGGAAAAACGCAAGTACGATAAATCCTCCTGGACTTATGAACTGGACGAAAACGGCTTCGCCAAACGCGATACCACGCTGCAACATCCGCGCTGCGTGTGGAACTTGCTGAAACAGCACGTTTCCCGCTACACGCCAGATGTGGTTGAAAACATCTGTGGTACGCCAAAAGACGCGTTCCTGAAAGTCTGCGAATACATCGCAGAAACCAGTGCTCACGATAAAACTGCCTCGTTCCTGTATGCCCTCGGCTGGACGCAACACTCCGTTGGTGCGCAAAACATTCGTACGATGGCGATGATCCAGCTGCTGCTCGGCAATATGGGGATGGCAGGCGGCGGCGTTAACGCCCTGCGCGGTCACTCCAATATTCAGGGGCTGACGGACCTGGGGCTGCTGTCGCAGAGCCTGCCAGGTTACATGACGCTGCCAAGCGAGAAGCAGACCGATCTGCAAACCTACCTTACCGCCAACACGCCAAAACCGCTGCTGGAAGGCCAGGTAAACTACTGGGGCAACTACCCGAAATTCTTCGTCTCTATGATGAAGGCCTTCTTTGGTGATAAAGCGACGGCGGAAAATAGCTGGGGCTTTGACTGGTTGCCGAAGTGGGATAAAGGCTACGACGTCCTGCAATACTTCGAGATGATGAAAGAGGGCAAGGTCAATGGCTATATCTGCCAGGGCTTTAACCCTGTTGCCTCATTCCCGAACAAAAACAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTAACTTCTGGCAGAACCACGGTGAGCTGAACGAAGTTGACTCGTCGAAGATCCAGACCGAAGTGTTCCGTCTGCCATCGACCTGCTTCGCGGAAGAGAACGGTTCTATCGTTAACTCAGGTCGCTGGTTACAGTGGCACTGGAAAGGTGCGGACGCCCCGGGGATTGCGCTGACTGACGGCGAGATCCTCTCCGGTATCTTCCTGCGCTTGCGCAAGATGTATGCCGAACAGGGTGGCGCGAACCCGGACCAGGTGCTGAACATGACATGGAACTACGCCATTCCGCATGAGCCATCTTCAGAAGAAGTGGCGATGGAGAGCAACGGTAAGGCGCTGGCCGATATTACCGATCCGGCAACCGGTGCGGTTATCGTCAAGAAAGGCCAACAACTTAGTTCGTTCGCCCAATTGCGCGATGACGGTACAACCTCCTGTGGCTGCTGGATTTTCGCCGGTAGCTGGACGCCGGAAGGCAACCAGATGGCACGCCGTGATAACGCCGATCCGTCTGGCCTCGGTAACACGCTGGGCTGGGCATGGGCATGGCCGCTTAACCGCCGCATTCTGTATAACCGCGCCTCCGCAGATCCGCAGGGTAACCCGTGGGATCCGAAGCGTCAGTTGCTGAAATGGGACGGCACTAAGTGGACCGGCTGGGATATTCCGGACTACAGCGCAGCGCCTCCGGGTAGCGGCGTCGGGCCGTTTATCATGCAGCAGGAAGGCATGGGGCGTCTGTTTGCCCTCGATAAGATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGTTTGAAACGCCGCTGGGAACTAACCCGCTGCATCCAAACGTTATCTCGAACCCGGCTGCACGTATCTTTAAAGACGACGCCGAAGCATTGGGTAAAGCCGATAAGTTCCCGTATGTCGGAACCACCTATCGTCTGACCGAGCACTTCCACTACTGGACCAAACACGCGCTGTTGAACGCGATTTTGCAGCCAGAGCAGTTTGTGGAAATCGGGGAGTCGCTGGCGAATAAACTTGGCATTGCCCAGGGCGATACCGTGAAAGTCTCCTCCAACCGTGGCTATATCAAAGCCAAAGCGGTGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCGATTCACTGGGGCTATGAAGGCGTAGCTAAAAAAGGCTTTATTGCCAATACTTTAACGCCATTCGTTGGTGATGCGAACACGCAGACGCCGGAGTTTAAGTCCTTCCTTGTGAATGTGGAAAAGGTGTAA", + "dna_sequence_length": 3051, + "functions": [ + "formate dehydrogenase-O, large subunit" + ], + "id": "CDS_3823", + "location": [ + [ + "NC_000913", + 4085822, + "-", + 3051 + ] + ], + "md5": "c06b1c52c01456f7c7720fe44a9e539d", + "parent_gene": "", + "protein_md5": "6d7d7dac1a071da94f40bc7219025c02", + "protein_translation": "MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV", + "protein_translation_length": 1016, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012714" + ], + [ + "gene_synonym", + "ECK3888" + ], + [ + "gene_synonym", + "EcoGene:EG11859" + ], + [ + "gene_synonym", + "GI:16131735" + ], + [ + "gene_synonym", + "GeneID:948393" + ], + [ + "gene_synonym", + "JW3866" + ], + [ + "gene_synonym", + "NP_418331.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32177" + ], + [ + "gene_synonym", + "b3895" + ], + [ + "gene_synonym", + "fdhD" + ] + ], + "dna_sequence": "GTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCATGTGGTGATGATGGCGTCGCCCAAAGACCTTGAGTACTTTGCGCTCGGTTTTTCGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTGTAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGACAAACTGTTAGGCCGCCGGTCACAAGAAGGGGAAAGCTGGCAGCAAGGTGCGGTACTGGTTTCCAGTCGTGCCAGTTATGAAATGGTGCAAAAGTCGGCGATGTGCGGCGTAGAGATTTTGTTTGCGGTGTCTGCCGCGACCACGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAA", + "dna_sequence_length": 834, + "functions": [ + "formate dehydrogenase formation protein" + ], + "id": "CDS_3824", + "location": [ + [ + "NC_000913", + 4086016, + "+", + 834 + ] + ], + "md5": "408be9c2bb29844fd02503000c9a2835", + "parent_gene": "", + "protein_md5": "32d6e505ebd2fa165e69c0a2e20b64be", + "protein_translation": "MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012718" + ], + [ + "gene_synonym", + "ECK3889" + ], + [ + "gene_synonym", + "EcoGene:EG11860" + ], + [ + "gene_synonym", + "GI:16131736" + ], + [ + "gene_synonym", + "GeneID:948392" + ], + [ + "gene_synonym", + "JW3867" + ], + [ + "gene_synonym", + "NP_418332.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32151" + ], + [ + "gene_synonym", + "b3896" + ], + [ + "gene_synonym", + "yiiG" + ] + ], + "dna_sequence": "ATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTATATCAAGTGCTACAACAAGTTACAGATCCCGGTACAGCGCAGTCTGGCGCGTTATGCTGACTGGCTGAAAGATTTTAAACAGGGGCCTACCGGTGAAGAGCGTACTGTTTATGGCATCTACGGCATTAGTGAATCCAACCTCGCTGAGTGTGAAAAAGGCGTAAAAAGTGCTGTGGCGTTAACGCCTGCGCTGCAACCAATTGATGGCGTGGCGGTGAGTTATATCGATGCTGCCGTGGCGTTGGGTAATACCATTAACGAAATGGATAAATATTACACCCAGGAAAATTATAAAGACGATGCGTTTGCGAAAGGGAAAACGCTGCACCAGACATTCTTAAAAAATCTGGAAGCCTTTGAACCTGTAGCCGAATCTTATCATGCGGCGATTCAGGAAATTAATGATAAGCGTCAGCTTGCGGAACTGAAAAATATTGAAGAAAGAGAAGGGAAAACATTCCACTACTACTCTCTGGCAGTCATGATTTCAGCGAAACAAATTAATAACCTGATATCGCAAGATAAGTTTGATGCAGAAGCGGCAATGAAGAAAGTGTCTGAACTGGAAACGCTAGTGGCGCAGGCCAAAGAAGCGGATAAAGGCGGCATGAATTTCTCGTTTATTAATTCGGCAGGCCAGTATCAACTCGAGGCTAAAAAATACGTTCGCCGCATCAGAGATAAAGTCCCGTACTCTGACTGGGATAAAGAGCAACTTCAGGACGCAAACTCAAGCTGGATGGTCGAAGACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAA", + "dna_sequence_length": 1056, + "functions": [ + "DUF3829 family lipoprotein" + ], + "id": "CDS_3825", + "location": [ + [ + "NC_000913", + 4087002, + "+", + 1056 + ] + ], + "md5": "1935a4087a5638a901846bdb9447f3e9", + "parent_gene": "", + "protein_md5": "bca2e9e0d6165326dffaadbf8f70637f", + "protein_translation": "MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR", + "protein_translation_length": 351, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012720" + ], + [ + "gene_synonym", + "ECK3890" + ], + [ + "gene_synonym", + "EcoGene:EG11861" + ], + [ + "gene_synonym", + "GI:16131737" + ], + [ + "gene_synonym", + "GeneID:948389" + ], + [ + "gene_synonym", + "JW3868" + ], + [ + "gene_synonym", + "NP_418333.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32152" + ], + [ + "gene_synonym", + "b3897" + ], + [ + "gene_synonym", + "frvR" + ], + [ + "gene_synonym", + "yiiH" + ] + ], + "dna_sequence": "ATGCTAAACGAACGCCAGTTAAAGATTGTCGATCTGCTGGAGCAACAGCCGCGCACGCCTGGCGAGCTGGCGCAACAGACTGGCGTTTCAGGCAGGACCATCCTGCGTGATATTGACTATCTCAACTTCACCCTTAACGGCAAAGCCCGCATTTTCGCCAGTGGCAGTGCGGGCTATCAGCTGGAAATCTTCGAGCGCCGCAGCTTTTTTCAGTTGCTGCAAAAGCACGATAACGACGATCGGCTGCTGGCGCTGTTATTACTGAATACTTTCACTCCCCGTGCGCAACTCGCCTCGGCGCTTAATTTGCCAGAAACGTGGGTAGCAGAGCGTCTGCCCCGGTTAAAACAGCGTTATGAACGCACTTGTTGCCTGGCCAGCCGCCCTGGTTTGGGCCATTTCATTGATGAGACAGAAGAGAAACGCGTTATCTTGCTGGCGAACTTGCTGCGCAAAGATCCGTTTTTAATTCCGCTGGCGGGCATAACACGAGACAACCTTCAGCATTTATCCACGGCCTGCGACAACCAACACCGCTGGCCGCTCATGCAGGGTGATTATCTCTCCAGCCTGATTCTGGCGATTTACGCCCTGCGTAATCAACTGACCGATGAGTGGCCGCAATATCCCGGTGACGAGATAAAACAAATCGTTGAACATAGCGGTCTGTTTCTTGGTGATAACGCTGTAAGAACCCTGACGGGTTTGATAGAGAAACAGCATCAGCAAGCGCAGGTAATTTCAGCCGATAATGTGCAGGGGTTGCTGCAAAGGGTGCCGGGCATCGCGTCATTGAATATTATTGATGCGCAGCTGGTTGAGAATATTACCGGGCATTTATTACGTTGCCTTGCCGCACCAGTGTGGATTGCTGAGCACCGCCAGAGCAGCATGAATAACCTGAAAGCCGCCTGGCCTGCGGCCTTTGATATGAGTCTGCACTTTATTACGCTACTGCGTGAACAGCTCGATATTCCCCTTTTCGACAGCGATCTGATCGGTTTGTATTTTGCCTGTGCGCTGGAGCGGCATCAAAACGAACGCCAGCCGATCATTTTGCTCTCGGACCAGAACGCGATTGCCACTATTAATCAGCTCGCCATTGAGCGCGATGTTTTAAATTGTCGGGTAATTATTGCCCGTAGCTTAAGCGAACTTGTTGCCATTCGCGAAGAGATTGAGCCGTTATTGATCATTAACAACAGCCATTATTTACTGGATGACGCGGTAAATAATTACATCACCGTAAAAAATATCATTACGGCTGCCGGTATCGAACAAATAAAACATTTTCTGGCGACGGCATTTATTCGCCAACAGCCGGAGCGTTTTTTCTCTGCCCCCGGAAGTTTTCATTATTCGAATGTACGCGGTGAAAGCTGGCAACATATTACCCGGCAAATTTGTGCGCAATTAGTCGCACAACACCATATTACCGCCGATGAAGCACAACGCATCATCGCCCGCGAAGGCGAAGGTGAAAACCTGATTGTTAATCGCCTCGCCATCCCACATTGCTGGAGCGAACAGGAGCGACGTTTTCGTGGATTTTTTATTACCCTCGCCCAACCAGTTGAGGTGAATAACGAAGTCATTAACCATGTCTTGATCGCCTGCGCCGCCGCCGATGCGCGTCATGAGCTAAAAATATTTAGCTATCTGGCAAGCATATTGTGTCAGCATCCGGCGGAGATTATTGCCGGGTTAACAGGATATGAGGCATTTATGGAGTTACTTCACAAGGGGTGA", + "dna_sequence_length": 1749, + "functions": [ + "putative frv operon regulator", + "contains a PTS EIIA domain" + ], + "id": "CDS_3826", + "location": [ + [ + "NC_000913", + 4089855, + "-", + 1749 + ] + ], + "md5": "c01510c22c0238826206a2705e2d1830", + "parent_gene": "", + "protein_md5": "09b9af6f98f5885a2d95d0a7cb0e2ea8", + "protein_translation": "MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG", + "protein_translation_length": 582, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012722" + ], + [ + "gene_synonym", + "ECK3891" + ], + [ + "gene_synonym", + "EcoGene:EG11862" + ], + [ + "gene_synonym", + "GI:16131738" + ], + [ + "gene_synonym", + "GeneID:948388" + ], + [ + "gene_synonym", + "JW3869" + ], + [ + "gene_synonym", + "NP_418334.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32153" + ], + [ + "gene_synonym", + "b3898" + ], + [ + "gene_synonym", + "frvX" + ], + [ + "gene_synonym", + "yiiI" + ] + ], + "dna_sequence": "ATGAACATTGAGTTACTGCAACAGTTGTGCGAAGCCAGCGCCGTCAGCGGCGATGAACAGGAAGTTCGCGACATTCTGATAAACACGCTGGAACCTTGCGTGAATGAAATCACCTTCGATGGTCTGGGCAGCTTTGTTGCCCGTAAGGGGAATAAAGGTCCAAAAGTTGCCGTTGTCGGACATATGGATGAAGTCGGCTTTATGGTCACCCACATCGACGAGAGCGGTTTTCTGCGTTTTACCACCATTGGCGGCTGGTGGAATCAGTCGATGCTCAACCACCGGGTAACCATACGCACACACAAGGGAGTGAAAATCCCTGGTGTGATTGGTTCCGTCGCGCCTCATGCGTTAACGGAAAAGCAAAAGCAACAACCGCTGTCATTTGATGAGATGTTCATTGATATTGGCGCGAACAGTCGCGAAGAGGTGGAAAAGCGCGGCGTGGAAATTGGTAATTTTATTAGCCCGGAAGCCAATTTTGCCTGCTGGGGCGAAGATAAAGTGGTCGGCAAGGCGTTGGATAACCGCATCGGCTGCGCAATGATGGCTGAACTATTGCAGACGGTGAATAATCCCGAAATTACGCTGTATGGCGTTGGCAGTGTGGAAGAAGAAGTTGGGCTACGCGGGGCGCAAACCTCGGCGGAACACATTAAACCGGACGTCGTGATCGTGTTGGATACCGCCGTAGCGGGCGATGTTCCGGGCATTGATAACATTAAATACCCGCTGAAACTGGGCCAGGGGCCGGGGCTGATGCTGTTTGACAAGCGCTACTTCCCCAACCAGAAACTGGTAGCAGCGTTAAAAAGCTGTGCCGCACATAACGATTTACCGCTGCAATTTTCCACCATGAAAACCGGTGCGACGGATGGCGGGCGCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGGAGAAAGTCAACGCGTTTAGCCAGTTCCGTCAGGTGGATTAA", + "dna_sequence_length": 1071, + "functions": [ + "putative peptidase" + ], + "id": "CDS_3827", + "location": [ + [ + "NC_000913", + 4090925, + "-", + 1071 + ] + ], + "md5": "564952f275e530b54430a6e5bc93f5c0", + "parent_gene": "", + "protein_md5": "f373348029ab4c9c94d3db5dd51e05ed", + "protein_translation": "MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTLTAEKVNAFSQFRQVD", + "protein_translation_length": 356, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012725" + ], + [ + "gene_synonym", + "ECK3892" + ], + [ + "gene_synonym", + "EcoGene:EG11863" + ], + [ + "gene_synonym", + "GI:90111664" + ], + [ + "gene_synonym", + "GeneID:948390" + ], + [ + "gene_synonym", + "JW5562" + ], + [ + "gene_synonym", + "NP_418335.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32154" + ], + [ + "gene_synonym", + "b3899" + ], + [ + "gene_synonym", + "frvB" + ], + [ + "gene_synonym", + "yiiJ" + ] + ], + "dna_sequence": "ATGGAGTCATCCTTACGTATTGTCGCGATCACCAACTGCCCCGCCGGGATCGCTCACACCTACATGGTGGCGGAAGCCCTGGAACAGAAAGCCCGTTCTCTCGGTCATACCATAAAAGTGGAAACTCAAGGGTCCAGTGGCGTTGAAAACCGCTTATCCAGCGAAGAGATTGCCGCTGCCGATTACGTCATTCTCGCTACCGGGCGTGGCCTGAGCGGTGATGATCGCGCGCGGTTTGCCGGGAAGAAAGTTTATGAGATTGCCATCTCCCAGGCGTTGAAAAATATCGACCAGATTTTCAGCGAATTACCGACAAACTCGCAGCTTTTTGCCGCAGATAGCGGCGTGAAGCTTGGCAAACAGGAAGTGCAAAGCGGTAGCGTGATGAGCCACCTGATGGCGGGCGTCTCTGCGGCGCTGCCGTTTGTCATCGGCGGTGGTATCCTGGTGGCGCTTGCCAACATGCTGGTGCAGTTCGGTTTGCCGTATACCGATATGTCGAAAGGCGCGCCGTCGTTTACCTGGGTAGTTGAATCCATCGGTTACCTTGGCTTCACCTTTATGATCCCCATCATGGGCGCTTATATTGCCTCGTCGATTGCCGATAAACCGGCTTTCGCTCCGGCGTTTCTGGTTTGCTATCTGGCGAACGACAAAGCGCTGCTCGGCACCCAGTCGGGTGCGGGATTCCTCGGCGCGGTGGTGCTGGGGCTGGCGATTGGCTATTTCGTCTTCTGGTTCCGCAAAGTGCGCCTTGGCAAAGCATTACAACCGCTGCTCGGTTCAATGCTGATCCCGTTCGTTACTCTGCTGGTTTTCGGCGTGCTCACTTACTACGTTATCGGGCCGGTGATGTCCGACCTCATGGGCGGGCTGCTCCACTTCCTGAATACCATTCCTCCATCAATGAAGTTTGCGGCAGCGTTTCTGGTCGGTGCGATGCTGGCGTTCGATATGGGCGGCCCCATCAATAAAACCGCCTGGTTCTTCTGCTTCTCACTGCTGGAAAAACACATTTATGACTGGTACGCCATCGTCGGCGTTGTCGCGCTGATGCCGCCCGTCGCGGCGGGTCTTGCGACGTTCATTGCGCCCAAACTGTTTACCCGACAGGAAAAAGAGGCTGCCAGTAGTGCCATTGTGGTCGGTGCCACAGTCGCAACCGAACCGGCTATTCCTTACGCTCTGGCAGCTCCGTTGCCGATGATTACCGCCAATACGCTGGCGGGCGGCATTACCGGCGTGCTGGTGATCGCTTTCGGAATCAAACGTCTGGCACCTGGTTTGGGTATCTTTGACCCGCTGATCGGCCTGATGTCGCCGGTGGGTTCGTTTTATCTGGTGCTGGCGATTGGCCTCGCGCTGAACATTTCATTCATTATCGTCCTGAAAGGATTGTGGTTACGCCGCAAAGCGAAAGCCGCGCAACAGGAGCTTGTCCATGAACATTGA", + "dna_sequence_length": 1452, + "functions": [ + "putative PTS enzyme, IIB component/IIC component" + ], + "id": "CDS_3828", + "location": [ + [ + "NC_000913", + 4092366, + "-", + 1452 + ] + ], + "md5": "f956f5d32cfda20ea1aa36294efbad52", + "parent_gene": "", + "protein_md5": "2c163ba489b2be2474a547fc2c98b4ae", + "protein_translation": "MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH", + "protein_translation_length": 483, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012727" + ], + [ + "gene_synonym", + "ECK3893" + ], + [ + "gene_synonym", + "EcoGene:EG11864" + ], + [ + "gene_synonym", + "GI:16131740" + ], + [ + "gene_synonym", + "GeneID:948391" + ], + [ + "gene_synonym", + "JW3871" + ], + [ + "gene_synonym", + "NP_418336.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32155" + ], + [ + "gene_synonym", + "b3900" + ], + [ + "gene_synonym", + "frvA" + ], + [ + "gene_synonym", + "yiiK" + ] + ], + "dna_sequence": "ATGGCAGCTCTTACTGCAAGCTGTATTGACCTGAATATTCAGGGCAATGGCGCTTATTCCGTTCTGAAGCAGTTGGCGACAATAGCGTTACAAAACGGTTTTATCACCGACTCACACCAGTTCCTGCAAACCCTGCTGCTGCGCGAAAAAATGCACTCTACTGGATTTGGTTCCGGTGTCGCCGTGCCGCACGGTAAAAGCGCCTGCGTTAAACAACCGTTCGTATTATTCGCCCGCAAAGCGCAGGCTATTGACTGGAAAGCCAGCGATGGCGAAGACGTCAATTGCTGGATCTGCCTCGGCGTGCCGCAAAGCGGCGAAGAGGATCAGGTCAAAATCATCGGCACACTGTGTCGCAAAATTATTCACAAGGAATTTATTCATCAACTGCAACAGGGCGATACCGACCAGGTGCTTGCCTTGTTAAATCAAACCCTCAGCTCATAA", + "dna_sequence_length": 447, + "functions": [ + "putative enzyme IIA component of PTS" + ], + "id": "CDS_3829", + "location": [ + [ + "NC_000913", + 4092823, + "-", + 447 + ] + ], + "md5": "a5e58f8d466cd41e7a80543623bcbab8", + "parent_gene": "", + "protein_md5": "c0e068ab23a6c7d07365f41705a9471c", + "protein_translation": "MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012729" + ], + [ + "gene_synonym", + "ECK3894" + ], + [ + "gene_synonym", + "EcoGene:EG11865" + ], + [ + "gene_synonym", + "GI:16131741" + ], + [ + "gene_synonym", + "GeneID:948402" + ], + [ + "gene_synonym", + "JW3872" + ], + [ + "gene_synonym", + "NP_418337.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32156" + ], + [ + "gene_synonym", + "b3901" + ], + [ + "gene_synonym", + "rhaM" + ], + [ + "gene_synonym", + "yiiL" + ] + ], + "dna_sequence": "ATGATCCGCAAAGCCTTTGTCATGCAGGTAAACCCCGACGCCCACGAAGAGTATCAGCGTCGGCATAATCCCATCTGGCCAGAACTGGAAGCAGTGCTGAAATCTCACGGTGCGCATAACTACGCCATCTATCTCGACAAAGCGCGTAATCTGCTGTTTGCCATGGTAGAGATTGAATCTGAAGAACGCTGGAATGCGGTTGCCAGCACTGATGTTTGCCAACGTTGGTGGAAATATATGACCGATGTTATGCCCGCTAACCCGGATAACAGCCCGGTGAGTAGCGAGCTGCAAGAAGTGTTTTACCTGCCGTAA", + "dna_sequence_length": 315, + "functions": [ + "L-rhamnose mutarotase" + ], + "id": "CDS_3830", + "location": [ + [ + "NC_000913", + 4093438, + "-", + 315 + ] + ], + "md5": "79e0d4fb3301dc60cb8742003e1545f0", + "parent_gene": "", + "protein_md5": "57a2292d55fc3b2bb2b01c9726349348", + "protein_translation": "MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012731" + ], + [ + "gene_synonym", + "ECK3895" + ], + [ + "gene_synonym", + "EcoGene:EG11866" + ], + [ + "gene_synonym", + "GI:16131742" + ], + [ + "gene_synonym", + "GeneID:948401" + ], + [ + "gene_synonym", + "JW3873" + ], + [ + "gene_synonym", + "NP_418338.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32169" + ], + [ + "gene_synonym", + "b3902" + ], + [ + "gene_synonym", + "rhaD" + ] + ], + "dna_sequence": "ATGCAAAACATTACTCAGTCCTGGTTTGTCCAGGGAATGATCAAAGCCACCACCGACGCCTGGCTGAAAGGCTGGGATGAGCGCAACGGCGGCAACCTGACGCTACGCCTGGATGACGCCGATATCGCACCATATCACGACAATTTCCACCAACAACCGCGCTATATCCCGCTCAGCCAGCCCATGCCTTTACTGGCAAATACACCGTTTATTGTCACCGGCTCGGGCAAATTCTTCCGTAACGTCCAGCTTGATCCTGCGGCTAACTTAGGCATCGTAAAAGTCGACAGCGACGGCGCGGGCTACCACATTCTTTGGGGGTTAACCAACGAAGCCGTCCCCACTTCCGAACTTCCGGCTCACTTCCTTTCCCACTGCGAGCGCATTAAAGCCACCAACGGCAAAGATCGGGTGATCATGCACTGCCACGCCACCAACCTGATCGCCCTCACCTATGTACTTGAAAACGACACCGCGGTCTTCACTCGCCAACTGTGGGAAGGCAGCACCGAGTGTCTGGTGGTATTCCCGGATGGCGTTGGCATTTTGCCGTGGATGGTGCCCGGCACGGACGAAATCGGCCAGGCGACCGCACAAGAGATGCAAAAACATTCGCTGGTGTTGTGGCCCTTCCACGGCGTCTTCGGCAGCGGACCGACGCTGGATGAAACCTTCGGTTTAATCGACACCGCAGAAAAATCAGCACAAGTATTAGTGAAGGTTTATTCGATGGGCGGCATGAAACAGACCATCAGCCGTGAAGAGTTGATAGCGCTCGGCAAGCGTTTCGGCGTTACGCCACTCGCCAGTGCGCTGGCGCTGTAA", + "dna_sequence_length": 825, + "functions": [ + "rhamnulose-1-phosphate aldolase" + ], + "id": "CDS_3831", + "location": [ + [ + "NC_000913", + 4094272, + "-", + 825 + ] + ], + "md5": "a9b6323eb7defa8a951c861ed0216a50", + "parent_gene": "", + "protein_md5": "0fbb4e4327a0778f49df12c491039489", + "protein_translation": "MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012736" + ], + [ + "gene_synonym", + "ECK3896" + ], + [ + "gene_synonym", + "EcoGene:EG11867" + ], + [ + "gene_synonym", + "GI:49176441" + ], + [ + "gene_synonym", + "GeneID:948400" + ], + [ + "gene_synonym", + "JW5561" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32170" + ], + [ + "gene_synonym", + "YP_026276.1" + ], + [ + "gene_synonym", + "b3903" + ], + [ + "gene_synonym", + "rhaA" + ] + ], + "dna_sequence": "ATGACCACTCAACTGGAACAGGCCTGGGAGCTAGCGAAACAGCGTTTCGCGGCGGTGGGGATTGATGTCGAGGAGGCGCTGCGCCAACTTGATCGTTTACCCGTTTCAATGCACTGCTGGCAGGGCGATGATGTTTCCGGTTTTGAAAACCCGGAAGGTTCGCTGACCGGGGGGATTCAGGCCACAGGCAATTATCCGGGCAAAGCGCGTAATGCCAGTGAGCTACGTGCCGATCTGGAACAGGCTATGCGGCTGATTCCGGGGCCGAAACGGCTTAATTTACATGCCATCTATCTGGAATCAGATACGCCAGTCTCGCGCGACCAGATCAAACCAGAGCACTTCAAAAACTGGGTTGAATGGGCGAAAGCCAATCAGCTCGGTCTGGATTTTAACCCCTCCTGCTTTTCGCATCCGCTAAGCGCCGATGGCTTTACGCTTTCCCATGCCGACGACAGCATTCGCCAGTTCTGGATTGATCACTGCAAAGCCAGCCGTCGCGTTTCGGCCTATTTTGGCGAGCAACTCGGCACACCATCGGTGATGAACATCTGGATCCCGGATGGTATGAAAGATATCACCGTTGACCGTCTCGCCCCGCGTCAGCGTCTGCTGGCAGCACTGGATGAGGTGATCAGCGAGAAGCTAAACCCTGCGCACCATATCGACGCCGTTGAGAGCAAATTGTTTGGCATTGGCGCAGAGAGCTACACGGTTGGCTCCAATGAGTTTTACATGGGGTATGCCACCAGCCGCCAGACTGCGCTGTGCCTGGACGCCGGGCACTTCCACCCGACTGAAGTGATTTCCGACAAGATTTCCGCCGCCATGCTGTATGTGCCGCAGTTGCTGCTGCACGTCAGCCGTCCGGTTCGCTGGGACAGCGATCACGTAGTGCTGCTGGATGATGAAACCCAGGCAATTGCCAGTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAA", + "dna_sequence_length": 1260, + "functions": [ + "L-rhamnose isomerase" + ], + "id": "CDS_3832", + "location": [ + [ + "NC_000913", + 4095982, + "-", + 1260 + ] + ], + "md5": "caadc48affb4415a67c665d12a9bee35", + "parent_gene": "", + "protein_md5": "4da7bdbc2f96924f4a0bb1d28c4e1eb6", + "protein_translation": "MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLESVRAYEKEILSRRG", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012738" + ], + [ + "gene_synonym", + "ECK3897" + ], + [ + "gene_synonym", + "EcoGene:EG11868" + ], + [ + "gene_synonym", + "GI:16131744" + ], + [ + "gene_synonym", + "GeneID:948399" + ], + [ + "gene_synonym", + "JW3875" + ], + [ + "gene_synonym", + "NP_418340.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32171" + ], + [ + "gene_synonym", + "b3904" + ], + [ + "gene_synonym", + "rhaB" + ] + ], + "dna_sequence": "ATGACCTTTCGCAATTGTGTCGCCGTCGATCTCGGCGCATCCAGTGGGCGCGTGATGCTGGCGCGTTACGAGCGTGAATGCCGCAGCCTGACGCTGCGCGAAATCCATCGTTTTAACAATGGGCTGCATAGTCAGAACGGCTATGTCACCTGGGATGTGGATAGCCTTGAAAGTGCCATTCGCCTTGGATTAAACAAGGTGTGCGAGGAAGGGATTCGTATCGATAGCATTGGGATTGATACCTGGGGCGTGGACTTTGTGCTGCTCGACCAACAGGGTCAGCGTGTGGGCCTGCCCGTTGCTTATCGCGATAGCCGCACCAATGGCCTAATGGCGCAGGCACAACAACAACTCGGCAAACGCGATATTTATCAACGTAGCGGCATCCAGTTTCTGCCCTTCAATACGCTTTATCAGTTGCGTGCGCTGACGGAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTGGTCGCCCGACGCATCCGGGTAATGTCATAGGTCACTGGATTTGCCCGCAGGGTAATGAGATTCCAGTGGTCGCCGTTGCCAGCCATGATACCGCCAGCGCGGTTATCGCCTCGCCGTTAAACGGCTCACGTGCTGCTTATCTCTCTTCTGGCACCTGGTCATTGATGGGCTTCGAAAGCCAGACGCCATTTACCAATGACACGGCACTGGCAGCCAACATCACCAATGAAGGCGGGGCGGAAGGTCGCTATCGGGTGCTGAAAAATATTATGGGCTTATGGCTGCTTCAGCGAGTGCTTCAGGAGCAGCAAATCAACGATCTTCCGGCGCTTATCTCCGCGACACAGGCACTTCCGGCTTGCCGCTTCATTATCAATCCCAATGACGATCGCTTTATTAATCCTGAGACGATGTGCAGCGAAATTCAGGCTGCGTGTCGGGAAACGGCGCAACCGATCCCGGAAAGTGATGCTGAACTGGCGCGCTGCATTTTCGACAGTCTGGCGCTGCTGTATGCCGATGTGTTGCATGAGCTGGCGCAGCTGCGCGGTGAAGATTTCTCGCAACTGCATATTGTCGGCGGAGGCTGCCAGAACACGCTGCTCAACCAGCTATGCGCCGATGCCTGCGGTATTCGGGTGATCGCCGGGCCTGTTGAAGCCTCGACGCTCGGCAATATCGGCATCCAGTTAATGACGCTGGATGAACTCAACAATGTGGATGATTTCCGTCAGGTCGTCAGCACCACCGCGAATCTGACCACCTTTACCCCTAATCCTGACAGTGAAATTGCCCACTATGTGGCGCAGATTCACTCTACACGACAGACAAAGGAGCTTTGCGCATGA", + "dna_sequence_length": 1470, + "functions": [ + "rhamnulokinase" + ], + "id": "CDS_3833", + "location": [ + [ + "NC_000913", + 4097448, + "-", + 1470 + ] + ], + "md5": "3be8b6c9c22bc00734a8abf2e8296eb7", + "parent_gene": "", + "protein_md5": "33665b68295cb44bd8fd39a2c892c014", + "protein_translation": "MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQEQQINDLPALISATQALPACRFIINPNDDRFINPETMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA", + "protein_translation_length": 489, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012745" + ], + [ + "gene_synonym", + "ECK3898" + ], + [ + "gene_synonym", + "EcoGene:EG10843" + ], + [ + "gene_synonym", + "GI:16131745" + ], + [ + "gene_synonym", + "GeneID:948397" + ], + [ + "gene_synonym", + "JW3876" + ], + [ + "gene_synonym", + "NP_418341.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09377" + ], + [ + "gene_synonym", + "b3905" + ], + [ + "gene_synonym", + "rhaC2" + ], + [ + "gene_synonym", + "rhaS" + ] + ], + "dna_sequence": "ATGACCGTATTACATAGTGTGGATTTTTTTCCGTCTGGTAACGCGTCCGTGGCGATAGAACCCCGGCTCCCGCAGGCGGATTTTCCTGAACATCATCATGATTTTCATGAAATTGTGATTGTCGAACATGGCACGGGTATTCATGTGTTTAATGGGCAGCCCTATACCATCACCGGTGGCACGGTCTGTTTCGTACGCGATCATGATCGGCATCTGTATGAACATACCGATAATCTGTGTCTGACCAATGTGCTGTATCGCTCGCCGGATCGATTTCAGTTTCTCGCCGGGCTGAATCAGTTGCTGCCACAAGAGCTGGATGGGCAGTATCCGTCTCACTGGCGCGTTAACCACAGCGTATTGCAGCAGGTGCGACAGCTGGTTGCACAGATGGAACAGCAGGAAGGGGAAAATGATTTACCCTCGACCGCCAGTCGCGAGATCTTGTTTATGCAATTACTGCTCTTGCTGCGTAAAAGCAGTTTGCAGGAGAACCTGGAAAACAGCGCATCACGTCTCAACTTGCTTCTGGCCTGGCTGGAGGACCATTTTGCCGATGAGGTGAATTGGGATGCCGTGGCGGATCAATTTTCTCTTTCACTGCGTACGCTACATCGGCAGCTTAAGCAGCAAACGGGACTGACGCCTCAGCGATACCTGAACCGCCTGCGACTGATGAAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAA", + "dna_sequence_length": 837, + "functions": [ + "transcriptional activator of rhaBAD and rhaT" + ], + "id": "CDS_3834", + "location": [ + [ + "NC_000913", + 4097736, + "+", + 837 + ] + ], + "md5": "81e29e63d7631f9c93f8c61287b4e2b5", + "parent_gene": "", + "protein_md5": "3625995567cf62d5b6d1056aa156bfb8", + "protein_translation": "MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012747" + ], + [ + "gene_synonym", + "ECK3899" + ], + [ + "gene_synonym", + "EcoGene:EG10842" + ], + [ + "gene_synonym", + "GI:171701684" + ], + [ + "gene_synonym", + "GeneID:948396" + ], + [ + "gene_synonym", + "JW3877" + ], + [ + "gene_synonym", + "NP_418342.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09378" + ], + [ + "gene_synonym", + "b3906" + ], + [ + "gene_synonym", + "rhaC1" + ], + [ + "gene_synonym", + "rhaR" + ] + ], + "dna_sequence": "GTGGCGCATCAGTTAAAACTTCTCAAAGATGATTTTTTTGCCAGCGACCAGCAGGCAGTCGCTGTGGCTGACCGTTATCCGCAAGATGTCTTTGCTGAACATACACATGATTTTTGTGAGCTGGTGATTGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCATGTGCCGTTTGCTAACGAAATGGCTGAGTTGCTGTTCGGGCAGTTGGTGATGTTGCTGAATCGCCATCGTTACACCAGTGATTCGTTGCCGCCAACATCCAGCGAAACGTTGCTGGATAAGCTGATTACCCGGCTGGCGGCTAGCCTGAAAAGTCCCTTTGCGCTGGATAAATTTTGTGATGAGGCATCGTGCAGTGAGCGCGTTTTGCGTCAGCAATTTCGCCAGCAGACTGGAATGACCATCAATCAATATCTGCGACAGGTCAGAGTGTGTCATGCGCAATATCTTCTCCAGCATAGCCGCCTGTTAATCAGTGATATTTCGACCGAATGTGGCTTTGAAGATAGTAACTATTTTTCGGTGGTGTTTACCCGGGAAACCGGGATGACGCCCAGCCAGTGGCGTCATCTCAATTCGCAGAAAGATTAA", + "dna_sequence_length": 849, + "functions": [ + "transcriptional activator of rhaSR" + ], + "id": "CDS_3835", + "location": [ + [ + "NC_000913", + 4098646, + "+", + 849 + ] + ], + "md5": "86ad17b5a27164ddbfc31ef1280948ec", + "parent_gene": "", + "protein_md5": "c1371aff9f64b961d6606a7d5ee2e825", + "protein_translation": "MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012749" + ], + [ + "gene_synonym", + "ECK3900" + ], + [ + "gene_synonym", + "EcoGene:EG11313" + ], + [ + "gene_synonym", + "GI:16131747" + ], + [ + "gene_synonym", + "GeneID:948398" + ], + [ + "gene_synonym", + "JW3878" + ], + [ + "gene_synonym", + "NP_418343.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27125" + ], + [ + "gene_synonym", + "b3907" + ], + [ + "gene_synonym", + "rhaT" + ] + ], + "dna_sequence": "ATGAGTAACGCGATTACGATGGGGATATTTTGGCATTTGATCGGCGCGGCCAGTGCAGCCTGTTTTTACGCTCCGTTCAAAAAAGTAAAAAAATGGTCATGGGAAACCATGTGGTCAGTCGGTGGGATTGTTTCGTGGATTATTCTGCCGTGGGCCATCAGCGCCCTGTTACTACCGAATTTCTGGGCGTATTACAGCTCGTTTAGTCTCTCTACGCGACTGCCTGTTTTTCTGTTCGGCGCTATGTGGGGGATCGGTAATATCAACTACGGCCTGACCATGCGTTATCTCGGCATGTCGATGGGAATTGGCATCGCCATTGGCATTACGTTGATTGTCGGTACGCTGATGACGCCAATTATCAACGGCAATTTCGATGTGTTGATTAGCACCGAAGGCGGACGCATGACGTTGCTCGGCGTTCTGGTGGCGCTGATTGGCGTAGGGATTGTAACTCGCGCCGGGCAGTTGAAAGAGCGCAAGATGGGCATTAAAGCCGAAGAGTTCAATCTGAAAAAAGGGCTGGTGCTGGCGGTGATGTGCGGCATTTTCTCTGCCGGGATGTCCTTTGCGATGAACGCCGCAAAACCGATGCATGAAGCCGCTGCCGCACTTGGCGTCGATCCACTGTATGTCGCTCTGCCAAGCTATGTTGTCATCATGGGCGGCGGCGCGATCATTAACCTCGGTTTCTGTTTTATTCGTCTGGCAAAAGTGAAGGATTTGTCGCTAAAAGCCGACTTCTCGCTGGCAAAATCGCTGATCATTCACAATGTGTTACTCTCGACACTGGGCGGGTTGATGTGGTATCTGCAATTCTTTTTCTATGCCTGGGGCCACGCCCGCATTCCGGCGCAGTATGACTACATCAGTTGGATGCTGCATATGAGTTTCTATGTATTGTGCGGCGGTATCGTCGGGCTGGTGCTGAAAGAGTGGAACAATGCAGGACGCCGTCCGGTAACGGTGTTGAGCCTCGGTTGTGTGGTGATTATTGTCGCCGCTAACATCGTCGGCATCGGCATGGCGAATTAA", + "dna_sequence_length": 1035, + "functions": [ + "L-rhamnose:proton symporter" + ], + "id": "CDS_3836", + "location": [ + [ + "NC_000913", + 4100525, + "-", + 1035 + ] + ], + "md5": "3a82c8d624a43d80480ecbbb0a9587e6", + "parent_gene": "", + "protein_md5": "a298828f1be9b0f60afe4316519db292", + "protein_translation": "MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTRLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLISTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKSLIIHNVLLSTLGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN", + "protein_translation_length": 344, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012761" + ], + [ + "gene_synonym", + "ECK3901" + ], + [ + "gene_synonym", + "EcoGene:EG10953" + ], + [ + "gene_synonym", + "GI:49176442" + ], + [ + "gene_synonym", + "GeneID:948403" + ], + [ + "gene_synonym", + "JW3879" + ], + [ + "gene_synonym", + "NP_418344.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00448" + ], + [ + "gene_synonym", + "b3908" + ], + [ + "gene_synonym", + "sodA" + ] + ], + "dna_sequence": "ATGAGCTATACCCTGCCATCCCTGCCGTATGCTTACGATGCCCTGGAACCGCACTTCGATAAGCAGACCATGGAAATCCACCACACCAAACACCATCAGACCTACGTAAACAACGCCAACGCGGCGCTGGAAAGCCTGCCAGAATTTGCCAACCTGCCGGTTGAAGAGCTGATCACCAAACTGGACCAGCTGCCAGCAGACAAGAAAACCGTACTGCGCAACAACGCTGGCGGTCACGCTAACCACAGCCTGTTCTGGAAAGGTCTGAAAAAAGGCACCACCCTGCAGGGTGACCTGAAAGCGGCTATCGAACGTGACTTCGGCTCCGTTGATAACTTCAAAGCAGAATTTGAAAAAGCGGCAGCTTCCCGCTTTGGTTCCGGCTGGGCATGGCTGGTGCTGAAAGGCGATAAACTGGCGGTGGTTTCTACTGCTAACCAGGATTCTCCGCTGATGGGTGAAGCTATTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAA", + "dna_sequence_length": 621, + "functions": [ + "superoxide dismutase, Mn" + ], + "id": "CDS_3837", + "location": [ + [ + "NC_000913", + 4100810, + "+", + 621 + ] + ], + "md5": "1c7452bb2c6608a98cc1effb74c76962", + "parent_gene": "", + "protein_md5": "8738a8053daf45e99fe4295483914470", + "protein_translation": "MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012764" + ], + [ + "gene_synonym", + "ECK3902" + ], + [ + "gene_synonym", + "EcoGene:EG11869" + ], + [ + "gene_synonym", + "GI:90111665" + ], + [ + "gene_synonym", + "GeneID:948407" + ], + [ + "gene_synonym", + "JW5560" + ], + [ + "gene_synonym", + "NP_418345.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A712" + ], + [ + "gene_synonym", + "b3909" + ], + [ + "gene_synonym", + "kdgT" + ] + ], + "dna_sequence": "ATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATTCCTTGGCGCACTGTGCCACACCTTCTCGCCGGGGGCGGGGAAATATTTTGGATCATTCACCAACGGGATGATTACCGGTACGGTGCCCATTCTGGCGGTGTGGTTTTTTTGCATGGGGGCGTCAATAAAATTAAGCGCGACGGGAACGGTACTGCGTAAATCCGGTACGCTGGTGGTAACTAAAATTGCCGTCGCGTGGGTGGTTGCGGCAATTGCCTCGCGTATTATTCCGGAACATGGTGTTGAAGTTGGATTCTTTGCCGGACTTTCAACGCTGGCGCTGGTGGCGGCGATGGATATGACCAATGGCGGACTTTACGCTTCCATCATGCAGCAGTACGGCACAAAAGAAGAAGCTGGGGCATTTGTGTTGATGTCGTTGGAGTCCGGGCCGCTCATGACGATGATTATTCTGGGCACTGCCGGGATTGCCTCGTTTGAACCGCATGTTTTCGTCGGCGCAGTATTACCGTTCCTGGTGGGCTTTGCCCTGGGGAACCTTGACCCTGAATTGCGAGAATTTTTCAGCAAAGCGGTGCAAACGCTGATTCCATTCTTTGCCTTCGCGCTGGGCAATACCATTGATTTGACTGTGATTGCCCAGACTGGTTTGCTGGGGATCCTGTTGGGTGTGGCAGTAATTATCGTGACCGGTATTCCGTTGATTATCGCCGATAAATTGATTGGCGGTGGCGATGGCACTGCCGGAATTGCCGCTTCCAGTTCCGCAGGGGCCGCGGTAGCGACACCTGTGCTGATTGCAGAAATGGTGCCTGCGTTTAAACCGATGGCTCCGGCAGCAACTTCGCTGGTAGCGACGGCGGTCATTGTGACTTCGATTCTGGTGCCAATTCTTACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAA", + "dna_sequence_length": 984, + "functions": [ + "2-keto-3-deoxy-D-gluconate transporter" + ], + "id": "CDS_3838", + "location": [ + [ + "NC_000913", + 4101690, + "+", + 984 + ] + ], + "md5": "fe6b9f73c28f1d72ab1198d81b1b2ded", + "parent_gene": "", + "protein_md5": "c99947d21a1fb44906dc1d9055b5af56", + "protein_translation": "MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012769" + ], + [ + "gene_synonym", + "ECK3903" + ], + [ + "gene_synonym", + "EcoGene:EG11870" + ], + [ + "gene_synonym", + "GI:90111666" + ], + [ + "gene_synonym", + "GeneID:948406" + ], + [ + "gene_synonym", + "JW5559" + ], + [ + "gene_synonym", + "NP_418346.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32157" + ], + [ + "gene_synonym", + "b3910" + ], + [ + "gene_synonym", + "yiiM" + ] + ], + "dna_sequence": "ATGCGATATCCGGTTGATGTATACACAGGCAAGATTCAGGCTTATCCCGAAGGCAAACCCAGCGCAATTGCTAAAATCCAGGTTGATGGTGAGTTGATGCTGACGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTTTATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGATATAGCGCAGTTGATGCAAAACACAGGTAAGGTGGGGTGGTTGTATAGCGTGATAGCGCCAGGGAAAGTGTCTGCGGACGCGCCGCTGGAGTTGGTTTCCCGTGTCAGCGATGTGACCGTGCAGGAGGCTGCCGCCATCGCATGGCATATGCCGTTTGATGACGATCAATATCACCGTTTACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAA", + "dna_sequence_length": 675, + "functions": [ + "6-N-hydroxylaminopurine resistance protein" + ], + "id": "CDS_3839", + "location": [ + [ + "NC_000913", + 4102822, + "+", + 675 + ] + ], + "md5": "95eb3799367df3ca633c900cb0026874", + "parent_gene": "", + "protein_md5": "8064773342d1f667eba1b471931772b8", + "protein_translation": "MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012772" + ], + [ + "gene_synonym", + "ECK3904" + ], + [ + "gene_synonym", + "EcoGene:EG10163" + ], + [ + "gene_synonym", + "GI:16131751" + ], + [ + "gene_synonym", + "GeneID:948405" + ], + [ + "gene_synonym", + "JW3882" + ], + [ + "gene_synonym", + "NP_418347.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE82" + ], + [ + "gene_synonym", + "b3911" + ], + [ + "gene_synonym", + "cpxA" + ], + [ + "gene_synonym", + "ecfB" + ], + [ + "gene_synonym", + "eup" + ], + [ + "gene_synonym", + "rssE" + ], + [ + "gene_synonym", + "ssd" + ] + ], + "dna_sequence": "ATGATAGGCAGCTTAACCGCGCGCATCTTCGCCATCTTCTGGCTGACGCTGGCGCTGGTGTTGATGTTGGTTTTGATGTTACCCAAGCTCGATTCACGCCAGATGACCGAGCTTCTGGATAGCGAACAGCGTCAGGGGCTGATGATTGAGCAGCATGTCGAAGCGGAGCTGGCGAACGATCCGCCCAACGATTTAATGTGGTGGCGGCGTCTGTTCCGGGCGATTGATAAGTGGGCACCGCCAGGACAGCGTTTGTTATTGGTGACCACCGAAGGCCGCGTGATCGGCGCTGAACGCAGCGAAATGCAGATCATTCGTAACTTTATTGGTCAGGCCGATAACGCCGATCATCCGCAGAAGAAAAAGTATGGCCGCGTGGAACTGGTCGGTCCGTTCTCCGTGCGTGATGGCGAAGATAATTACCAACTTTATCTGATTCGTCCGGCCAGCAGTTCTCAATCCGATTTCATTAACTTACTGTTTGACCGCCCGCTATTACTGCTGATTGTCACCATGTTGGTCAGTACGCCGCTGCTGTTGTGGTTGGCCTGGAGTCTGGCAAAACCGGCGCGTAAGCTGAAAAACGCTGCCGATGAAGTTGCCCAGGGAAACTTACGCCAGCACCCGGAACTGGAAGCGGGGCCACAGGAATTCCTTGCCGCAGGTGCCAGTTTTAACCAGATGGTCACCGCGCTGGAGCGCATGATGACCTCTCAGCAGCGTCTGCTTTCTGATATCTCTCACGAGCTGCGCACCCCGCTGACGCGTCTGCAACTGGGTACGGCGTTACTGCGCCGTCGTAGCGGTGAAAGCAAGGAACTGGAGCGTATTGAAACCGAAGCGCAACGTCTGGACAGCATGATCAACGATCTGTTGGTGATGTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGAGTGAAGTGCTGGATAACGCGGCGTTCGAAGCCGAGCAAATGGGCAAGTCGTTGACAGTTAACTTCCCGCCTGGGCCGTGGCCGCTGTACGGCAATCCGAACGCCCTGGAAAGTGCGCTGGAAAACATTGTTCGTAATGCTCTGCGTTATTCCCATACGAAGATTGAAGTGGGCTTTGCGGTAGATAAAGACGGTATCACCATTACGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTCTATCGTACCGATGAAGCACGCGATCGTGAATCTGGCGGTACAGGTTTGGGGCTGGCGATTGTTGAAACCGCCATTCAGCAGCATCGTGGCTGGGTGAAGGCAGAAGACAGCCCGCTGGGCGGTTTACGGCTGGTGATTTGGTTGCCGCTGTATAAGCGGAGTTAA", + "dna_sequence_length": 1374, + "functions": [ + "sensory histidine kinase in two-component regulatory system with CpxR" + ], + "id": "CDS_3840", + "location": [ + [ + "NC_000913", + 4104975, + "-", + 1374 + ] + ], + "md5": "2e6a67d04258286d9c4ae1e45a36d03d", + "parent_gene": "", + "protein_md5": "19c5ed765ae963a9382e13d89227355c", + "protein_translation": "MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012774" + ], + [ + "gene_synonym", + "ECK3905" + ], + [ + "gene_synonym", + "EcoGene:EG10020" + ], + [ + "gene_synonym", + "GI:16131752" + ], + [ + "gene_synonym", + "GeneID:948404" + ], + [ + "gene_synonym", + "JW3883" + ], + [ + "gene_synonym", + "NP_418348.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE88" + ], + [ + "gene_synonym", + "b3912" + ], + [ + "gene_synonym", + "cpxR" + ], + [ + "gene_synonym", + "yiiA" + ] + ], + "dna_sequence": "ATGAATAAAATCCTGTTAGTTGATGATGACCGAGAGCTGACTTCCCTATTAAAGGAGCTGCTCGAGATGGAAGGCTTCAACGTGATTGTTGCCCACGATGGGGAACAGGCGCTTGATCTTCTGGACGACAGCATTGATTTACTTTTGCTTGACGTAATGATGCCGAAGAAAAATGGTATCGACACATTAAAAGCACTTCGCCAGACACACCAGACGCCTGTCATTATGTTGACGGCGCGCGGCAGTGAACTTGATCGCGTTCTCGGCCTTGAGCTGGGCGCAGATGACTATCTCCCGAAACCGTTTAATGATCGTGAGCTGGTGGCACGTATTCGCGCGATCCTGCGCCGTTCGCACTGGAGCGAGCAACAGCAAAACAACGACAACGGTTCACCGACACTGGAAGTTGATGCCTTAGTGCTGAATCCAGGCCGTCAGGAAGCCAGCTTCGACGGGCAAACGCTGGAGTTAACCGGTACTGAGTTTACCCTGCTCTATTTGCTGGCACAGCATCTGGGTCAGGTGGTTTCCCGTGAACATTTAAGCCAGGAAGTGTTGGGCAAACGCCTGACGCCTTTCGACCGCGCTATTGATATGCACATTTCCAACCTGCGTCGTAAACTGCCGGATCGTAAAGATGGTCACCCGTGGTTTAAAACCTTGCGTGGTCGCGGCTATCTGATGGTTTCTGCTTCATGA", + "dna_sequence_length": 699, + "functions": [ + "response regulator in two-component regulatory system with CpxA" + ], + "id": "CDS_3841", + "location": [ + [ + "NC_000913", + 4105670, + "-", + 699 + ] + ], + "md5": "c7cbb039bbd28ce78d22a586de26855a", + "parent_gene": "", + "protein_md5": "893a3274dc45ef91b256983a83c8b153", + "protein_translation": "MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174117" + ], + [ + "gene_synonym", + "ECK3906" + ], + [ + "gene_synonym", + "EcoGene:EG11872" + ], + [ + "gene_synonym", + "GI:49176443" + ], + [ + "gene_synonym", + "GeneID:2847688" + ], + [ + "gene_synonym", + "JW5558" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE85" + ], + [ + "gene_synonym", + "YP_026277.1" + ], + [ + "gene_synonym", + "b4484" + ], + [ + "gene_synonym", + "cpxP" + ], + [ + "gene_synonym", + "yiiO" + ] + ], + "dna_sequence": "ATGCGCATAGTTACCGCTGCCGTCATGGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTGAGATGGCAAAAGTCCGCAACCAAATGTATCGCCTGTTAACGCCGGAGCAGCAAGCGGTTTTAAACGAGAAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAG", + "dna_sequence_length": 501, + "functions": [ + "inhibitor of the cpx response", + "periplasmic adaptor protein" + ], + "id": "CDS_3842", + "location": [ + [ + "NC_000913", + 4105820, + "+", + 501 + ] + ], + "md5": "1a8a570d6c5fd81f9767feff4eb646ea", + "parent_gene": "", + "protein_md5": "dfa9e01deeb9b70c1ffa4b789a91d914", + "protein_translation": "MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSSSNSRSQ", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012786" + ], + [ + "gene_synonym", + "ECK3907" + ], + [ + "gene_synonym", + "EcoGene:EG11873" + ], + [ + "gene_synonym", + "GI:16131753" + ], + [ + "gene_synonym", + "GeneID:948413" + ], + [ + "gene_synonym", + "JW3886" + ], + [ + "gene_synonym", + "NP_418350.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69380" + ], + [ + "gene_synonym", + "b3915" + ], + [ + "gene_synonym", + "fieF" + ], + [ + "gene_synonym", + "yiiP" + ] + ], + "dna_sequence": "ATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCGACGGCGATGGCTTCGCTGCTATTGCTGATTAAAATTTTTGCATGGTGGTATACCGGGTCGGTGAGTATTCTCGCCGCGCTGGTGGATTCGCTGGTGGATATCGGCGCGTCGTTGACGAATTTATTGGTGGTGCGATATTCCCTGCAACCTGCCGACGATAATCACTCGTTTGGTCACGGTAAAGCTGAGTCCCTCGCGGCGCTGGCGCAAAGTATGTTTATCTCCGGTTCGGCACTATTCCTGTTTTTGACGGGTATTCAACATCTGATATCTCCAACACCGATGACAGATCCAGGCGTCGGGGTTATCGTGACAATTGTGGCGCTAATTTGTACGATTATCCTTGTCTCGTTTCAGCGTTGGGTGGTGCGGCGGACGCAAAGCCAGGCGGTGCGGGCTGATATGCTACATTACCAGTCTGATGTTATGATGAACGGCGCAATTCTGCTGGCGCTGGGGTTGTCCTGGTACGGCTGGCATCGCGCCGATGCTCTGTTTGCATTGGGAATCGGCATCTATATTTTATATAGCGCGTTACGCATGGGATATGAGGCGGTACAGTCATTACTGGATCGCGCATTGCCTGATGAGGAACGGCAAGAAATTATTGATATCGTGACTTCCTGGCCGGGTGTTAGCGGCGCTCACGATCTTCGCACGCGGCAGTCAGGGCCGACCCGCTTTATTCAGATTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAA", + "dna_sequence_length": 903, + "functions": [ + "ferrous iron and zinc transporter" + ], + "id": "CDS_3843", + "location": [ + [ + "NC_000913", + 4106469, + "+", + 903 + ] + ], + "md5": "e9bd0c0b6041775910f8c28ac3a3f235", + "parent_gene": "", + "protein_md5": "cc4174eee4938d92c203544008c7e362", + "protein_translation": "MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012789" + ], + [ + "gene_synonym", + "ECK3908" + ], + [ + "gene_synonym", + "EcoGene:EG10699" + ], + [ + "gene_synonym", + "GI:16131754" + ], + [ + "gene_synonym", + "GeneID:948412" + ], + [ + "gene_synonym", + "JW3887" + ], + [ + "gene_synonym", + "NP_418351.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A796" + ], + [ + "gene_synonym", + "b3916" + ], + [ + "gene_synonym", + "pfkA" + ] + ], + "dna_sequence": "ATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGATGCGCCAGGCATGAACGCCGCAATTCGCGGGGTTGTTCGTTCTGCGCTGACAGAAGGTCTGGAAGTAATGGGTATTTATGACGGCTATCTGGGTCTGTATGAAGACCGTATGGTACAGCTAGACCGTTACAGCGTGTCTGACATGATCAACCGTGGCGGTACGTTCCTCGGTTCTGCGCGTTTCCCGGAATTCCGCGACGAGAACATCCGCGCCGTGGCTATCGAAAACCTGAAAAAACGTGGTATCGACGCGCTGGTGGTTATCGGCGGTGACGGTTCCTACATGGGTGCAATGCGTCTGACCGAAATGGGCTTCCCGTGCATCGGTCTGCCGGGCACTATCGACAACGACATCAAAGGCACTGACTACACTATCGGTTTCTTCACTGCGCTGAGCACCGTTGTAGAAGCGATCGACCGTCTGCGTGACACCTCTTCTTCTCACCAGCGTATTTCCGTGGTGGAAGTGATGGGCCGTTATTGTGGAGATCTGACGTTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTCGTGAAACCCGCGCAACTGTGCTGGGCCACATCCAGCGCGGTGGTTCTCCGGTGCCTTACGACCGTATTCTGGCTTCCCGTATGGGCGCTTACGCTATCGATCTGCTGCTGGCAGGTTACGGCGGTCGTTGTGTAGGTATCCAGAACGAACAGCTGGTTCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAA", + "dna_sequence_length": 963, + "functions": [ + "6-phosphofructokinase I" + ], + "id": "CDS_3844", + "location": [ + [ + "NC_000913", + 4107552, + "+", + 963 + ] + ], + "md5": "4b16d37c8982078f6918c193e21f8425", + "parent_gene": "", + "protein_md5": "9f6606c2e93c6ac75fdc60dff2f54955", + "protein_translation": "MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012794" + ], + [ + "gene_synonym", + "ECK3909" + ], + [ + "gene_synonym", + "EcoGene:EG10929" + ], + [ + "gene_synonym", + "GI:16131755" + ], + [ + "gene_synonym", + "GeneID:948411" + ], + [ + "gene_synonym", + "JW3888" + ], + [ + "gene_synonym", + "NP_418352.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG78" + ], + [ + "gene_synonym", + "b3917" + ], + [ + "gene_synonym", + "sbp" + ] + ], + "dna_sequence": "ATGAACAAGTGGGGCGTAGGGTTAACATTTTTGCTGGCGGCAACCAGCGTTATGGCAAAGGATATTCAGCTTCTTAACGTTTCATATGATCCAACGCGCGAATTGTACGAACAGTACAACAAGGCATTCAGCGCCCACTGGAAACAGCAAACTGGTGATAACGTGGTGATTCGTCAGTCACACGGTGGCTCAGGTAAACAAGCGACGTCGGTAATCAACGGTATTGAAGCTGATGTTGTCACGCTGGCTCTGGCCTATGACGTGGACGCAATTGCGGAACGCGGGCGGATTGATAAAGAGTGGATCAAACGTCTGCCGGATAACTCCGCACCGTACACTTCCACCATTGTTTTCCTGGTACGTAAGGGAAATCCGAAGCAGATCCATGACTGGAACGATCTGATTAAACCGGGTGTTTCGGTGATCACGCCTAATCCGAAAAGCTCTGGTGGCGCGCGCTGGAACTACCTGGCAGCCTGGGGCTACGCGCTGCATCACAACAACAACGATCAGGCAAAAGCACAGGATTTTGTTCGGGCACTGTATAAAAACGTCGAAGTTCTGGATTCTGGCGCGCGTGGCTCCACTAACACTTTTGTCGAGCGCGGAATTGGCGATGTACTGATTGCCTGGGAAAACGAAGCTCTGCTGGCAGCGAATGAACTGGGGAAAGATAAATTCGAAATCGTCACGCCGAGTGAGTCTATCCTCGCAGAGCCAACCGTGTCGGTGGTCGATAAAGTGGTCGAGAAAAAAGGTACTAAAGAGGTGGCGGAAGCCTACCTGAAATATCTCTACTCGCCAGAAGGTCAGGAAATTGCCGCGAAAAACTACTACCGTCCGCGCGACGCTGAGGTGGCGAAAAAGTACGAAAATGCGTTTCCAAAGCTGAAGTTATTCACCATTGATGAAGAGTTCGGCGGCTGGACGAAAGCGCAAAAAGAGCATTTTGCTAACGGCGGTACGTTCGATCAGATCAGCAAACGCTGA", + "dna_sequence_length": 990, + "functions": [ + "sulfate transporter subunit" + ], + "id": "CDS_3845", + "location": [ + [ + "NC_000913", + 4108834, + "+", + 990 + ] + ], + "md5": "b7ea3613965b7f1b43c61cac03b3b857", + "parent_gene": "", + "protein_md5": "584800b59681e462425a4237fd481a99", + "protein_translation": "MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQTGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWIKRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR", + "protein_translation_length": 329, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012797" + ], + [ + "gene_synonym", + "ECK3910" + ], + [ + "gene_synonym", + "EcoGene:EG10138" + ], + [ + "gene_synonym", + "GI:16131756" + ], + [ + "gene_synonym", + "GeneID:948410" + ], + [ + "gene_synonym", + "JW3889" + ], + [ + "gene_synonym", + "NP_418353.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06282" + ], + [ + "gene_synonym", + "b3918" + ], + [ + "gene_synonym", + "cdh" + ], + [ + "gene_synonym", + "pnuE" + ], + [ + "gene_synonym", + "ushB" + ] + ], + "dna_sequence": "ATGAAAAAAGCGGGTCTTCTTTTTTTGGTGATGATAGTTATCGCCGTTGTGGCTGCCGGTATTGGTTACTGGAAATTAACCGGTGAAGAGTCGGATACATTACGTAAGATTGTCCTTGAGGAATGTTTGCCCAATCAGCAGCAAAATCAAAATCCTTCGCCATGTGCGGAAGTCAAACCCAATGCCGGATACGTGGTTTTAAAAGATCTTAATGGCCCACTGCAATATCTGTTGATGCCAACGTATCGTATTAACGGTACTGAAAGTCCTTTGTTGACCGATCCTTCAACGCCGAACTTCTTTTGGTTGGCTTGGCAGGCGCGTGATTTTATGAGCAAAAAATACGGCCAGCCGGTTCCCGATCGCGCGGTTTCTTTGGCGATCAACTCCCGCACCGGGCGTACGCAAAACCATTTTCATATTCATATCTCTTGTATTCGTCCTGATGTGCGCAAACAGCTGGATAACAATCTGGCGAACATCAGCAGCCGCTGGTTGCCACTGCCAGGTGGTTTGCGCGGGCATGAATACCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAA", + "dna_sequence_length": 756, + "functions": [ + "CDP-diacylglycerol phosphotidylhydrolase" + ], + "id": "CDS_3846", + "location": [ + [ + "NC_000913", + 4109930, + "+", + 756 + ] + ], + "md5": "68f46594f77481f2cc8a338afd4115d3", + "parent_gene": "", + "protein_md5": "4f9f5141efd0d5b28af1bbe6ff6dcb73", + "protein_translation": "MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012799" + ], + [ + "gene_synonym", + "ECK3911" + ], + [ + "gene_synonym", + "EcoGene:EG11015" + ], + [ + "gene_synonym", + "GI:16131757" + ], + [ + "gene_synonym", + "GeneID:948409" + ], + [ + "gene_synonym", + "JW3890" + ], + [ + "gene_synonym", + "NP_418354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A858" + ], + [ + "gene_synonym", + "b3919" + ], + [ + "gene_synonym", + "tpi" + ], + [ + "gene_synonym", + "tpiA" + ] + ], + "dna_sequence": "ATGCGACATCCTTTAGTGATGGGTAACTGGAAACTGAACGGCAGCCGCCACATGGTTCACGAGCTGGTTTCTAACCTGCGTAAAGAGCTGGCAGGTGTTGCTGGCTGTGCGGTTGCAATCGCACCACCGGAAATGTATATCGATATGGCGAAGCGCGAAGCTGAAGGCAGCCACATCATGCTGGGTGCGCAAAACGTGGACCTGAACCTGTCCGGCGCATTCACCGGTGAAACCTCTGCTGCTATGCTGAAAGACATCGGCGCACAGTACATCATCATCGGTCACTCTGAACGTCGTACTTACCACAAAGAATCTGACGAACTGATCGCGAAAAAATTCGCGGTGCTGAAAGAGCAGGGCCTGACTCCGGTTCTGTGCATCGGTGAAACCGAAGCTGAAAATGAAGCGGGCAAAACTGAAGAAGTTTGCGCACGTCAGATCGACGCGGTACTGAAAACTCAGGGTGCTGCGGCATTCGAAGGTGCGGTTATCGCTTACGAACCTGTATGGGCAATCGGTACTGGCAAATCTGCAACTCCGGCTCAGGCACAGGCTGTTCACAAATTCATCCGTGACCACATCGCTAAAGTTGACGCTAACATCGCTGAACAAGTGATCATTCAGTACGGCGGCTCTGTAAACGCGTCTAACGCTGCAGAACTGTTTGCTCAGCCGGATATCGACGGCGCGCTGGTTGGTGGTGCTTCTCTGAAAGCTGACGCCTTCGCAGTAATCGTTAAAGCTGCAGAAGCGGCTAAACAGGCTTAA", + "dna_sequence_length": 768, + "functions": [ + "triosephosphate isomerase" + ], + "id": "CDS_3847", + "location": [ + [ + "NC_000913", + 4111507, + "-", + 768 + ] + ], + "md5": "0e4ab330ea50809cf5b00f1de26503e4", + "parent_gene": "", + "protein_md5": "37cc44e310531f01ba4bb7cee5d65c85", + "protein_translation": "MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012802" + ], + [ + "gene_synonym", + "ECK3912" + ], + [ + "gene_synonym", + "EcoGene:EG11874" + ], + [ + "gene_synonym", + "GI:16131758" + ], + [ + "gene_synonym", + "GeneID:948408" + ], + [ + "gene_synonym", + "JW3891" + ], + [ + "gene_synonym", + "NP_418355.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32160" + ], + [ + "gene_synonym", + "b3920" + ], + [ + "gene_synonym", + "yiiQ" + ] + ], + "dna_sequence": "ATGAAGCCAGGGTGTACGCTGTTTTTTCTCTTATGTTCTGCATTAACCGTTACAACAGAGGCGCATGCACAAACACCAGATACGGCAACGACCGCGCCTTATCTGCTGGCTGGAGCCCCTACTTTCGATCTCTCCATCAGCCAGTTTCGAGAAGACTTTAACAGCCAGAATCCCAGCCTGCCACTGAACGAATTTCGTGCCATCGACAGCAGTCCCGACAAAGCCAATCTCACTCGTGCTGCAAGTAAAATTAATGAGAACTTGTATGCTTCTACAGCGCTGGAGCGCGGTACCTTAAAAATCAAAAGCATTCAAATGACCTGGCTACCCATCCAGGGGCCAGAGCAAAAAGCCGCGAAAGCGAAAGCTCAGGAATACATGGCAGCGGTGATCCGCACACTCACCCCATTAATGACCAAAACACAAAGCCAGAAAAAACTGCAGTCGCTACTAACGGCGGGGAAAAACAAACGTTATTACACCGAGACAGAAGGTGCACTGCGTTATGTTGTCGCGGACAACGGCGAAAAGGGGCTGACCTTCGCTGTTGAACCGATTAAGCTGGCGCTATCTGAATCGCTTGAAGGTTTGAATAAATGA", + "dna_sequence_length": 600, + "functions": [ + "DUF1454 family putative periplasmic protein" + ], + "id": "CDS_3848", + "location": [ + [ + "NC_000913", + 4112214, + "-", + 600 + ] + ], + "md5": "fd0964295086388a79e39c2884096ac7", + "parent_gene": "", + "protein_md5": "1d30a08a1f959757a1607e72126a36a0", + "protein_translation": "MKPGCTLFFLLCSALTVTTEAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012809" + ], + [ + "gene_synonym", + "ECK3913" + ], + [ + "gene_synonym", + "EcoGene:EG11875" + ], + [ + "gene_synonym", + "GI:16131759" + ], + [ + "gene_synonym", + "GeneID:948417" + ], + [ + "gene_synonym", + "JW3892" + ], + [ + "gene_synonym", + "NP_418356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF34" + ], + [ + "gene_synonym", + "b3921" + ], + [ + "gene_synonym", + "yiiR" + ] + ], + "dna_sequence": "ATGACCATACAGCAATGGTTATTCTCATTTAAAGGGCGTATTGGACGCCGTGATTTCTGGATTTGGATAGGCCTGTGGTTCGCAGGCATGCTGGTGCTTTTCTCACTGGCGGGTAAGAATCTACTCGATATTCAGACCGCGGCGTTTTGCCTTGTGTGCTTGCTCTGGCCAACAGCGGCAGTAACTGTTAAGCGCTTGCATGATCGCGGGCGTTCCGGCGCATGGGCATTTCTGATGATTGTGGCGTGGATGCTGCTGGCGGGTAACTGGGCGATTTTACCGGGTGTCTGGCAATGGGCGGTGGGGCGTTTTGTCCCGACGTTGATTCTGGTGATGATGCTTATCGATCTTGGTGCGTTTGTTGGCACACAAGGCGAAAATAAATATGGTAAAGATACTCAGGATGTGAAGTATAAAGCCGACAATAAATCAAGTAATTAA", + "dna_sequence_length": 441, + "functions": [ + "DUF805 family putative inner membrane protein" + ], + "id": "CDS_3849", + "location": [ + [ + "NC_000913", + 4112315, + "+", + 441 + ] + ], + "md5": "83a09d663a28623eda96acd9ddec6e1e", + "parent_gene": "", + "protein_md5": "2d0b7132078823aa49193912d70fce18", + "protein_translation": "MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN", + "protein_translation_length": 146, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012813" + ], + [ + "gene_synonym", + "ECK3914" + ], + [ + "gene_synonym", + "EcoGene:EG11876" + ], + [ + "gene_synonym", + "GI:16131760" + ], + [ + "gene_synonym", + "GeneID:948416" + ], + [ + "gene_synonym", + "JW3893" + ], + [ + "gene_synonym", + "NP_418357.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32162" + ], + [ + "gene_synonym", + "b3922" + ], + [ + "gene_synonym", + "yiiS" + ] + ], + "dna_sequence": "ATGAAAGATGTCGTAGATAAATGCAGTACTAAAGGATGTGCGATTGATATCGGTACGGTGATTGATAACGACAACTGTACCAGTAAGTTTTCGCGCTTTTTTGCCACCCGCGAAGAAGCAGAGTCTTTTATGACCAAACTGAAAGAGCTTGCCGCCGCTACATCCTCTGCAGATGAAGGGGCCAGCGTGGCCTATAAGATTAAGGATCTGGAGGGGCAAGTTGAGCTTGATGCGGCCTTCACTTTCTCATGCCAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGA", + "dna_sequence_length": 300, + "functions": [ + "UPF0381 family protein" + ], + "id": "CDS_3850", + "location": [ + [ + "NC_000913", + 4112967, + "+", + 300 + ] + ], + "md5": "ed37685b398f47e7b6ce6d047cadfa49", + "parent_gene": "", + "protein_md5": "f6c700aae0873675089d290443b8a219", + "protein_translation": "MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012816" + ], + [ + "gene_synonym", + "ECK3915" + ], + [ + "gene_synonym", + "EcoGene:EG11877" + ], + [ + "gene_synonym", + "GI:16131761" + ], + [ + "gene_synonym", + "GeneID:948415" + ], + [ + "gene_synonym", + "JW3894" + ], + [ + "gene_synonym", + "NP_418358.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAB8" + ], + [ + "gene_synonym", + "b3923" + ], + [ + "gene_synonym", + "uspD" + ], + [ + "gene_synonym", + "yiiT" + ] + ], + "dna_sequence": "ATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCGCCAGACATAATGACGCTCACCTGACGTTAATTCATATTGATGATGGCTTAAGCGAGTTGTATCCGGGTATCTACTTCCCTGCAACAGAAGATATTCTTCAATTGTTGAAGAATAAGTCGGATAACAAGCTGTATAAACTGACGAAAAATATTCAATGGCCGAAGACAAAACTGCGTATTGAACGCGGAGAAATGCCGGAAACACTGCTGGAAATTATGCAAAAAGAGCAGTGCGACCTCCTTGTCTGTGGTCATCATCACTCATTTATCAACCGTTTGATGCCGGCATATCGCGGGATGATCAATAAGATGAGTGCGGATTTGCTCATCGTGCCGTTTATCGATAAGTAA", + "dna_sequence_length": 429, + "functions": [ + "stress-induced protein" + ], + "id": "CDS_3851", + "location": [ + [ + "NC_000913", + 4113293, + "+", + 429 + ] + ], + "md5": "ddc5fe4019566cb2156c2654d9cd3fa5", + "parent_gene": "", + "protein_md5": "438a615829ba5eaaf7a6b39401811d6e", + "protein_translation": "MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012818" + ], + [ + "gene_synonym", + "ECK3916" + ], + [ + "gene_synonym", + "EcoGene:EG11518" + ], + [ + "gene_synonym", + "GI:16131762" + ], + [ + "gene_synonym", + "GeneID:948414" + ], + [ + "gene_synonym", + "JW3895" + ], + [ + "gene_synonym", + "NP_418359.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28861" + ], + [ + "gene_synonym", + "b3924" + ], + [ + "gene_synonym", + "flxR" + ], + [ + "gene_synonym", + "fpr" + ] + ], + "dna_sequence": "ATGGCTGATTGGGTAACAGGCAAAGTCACTAAAGTGCAGAACTGGACCGACGCCCTGTTTAGTCTCACCGTTCACGCCCCCGTGCTTCCGTTTACCGCCGGGCAATTTACCAAGCTTGGCCTTGAAATCGACGGCGAACGCGTCCAGCGCGCCTACTCCTATGTAAACTCGCCCGATAATCCCGATCTGGAGTTTTACCTGGTCACCGTCCCCGATGGCAAATTAAGCCCACGACTGGCGGCACTGAAACCAGGCGATGAAGTGCAGGTGGTTAGCGAAGCGGCAGGATTCTTTGTGCTCGATGAAGTGCCGCACTGCGAAACGCTATGGATGCTGGCAACCGGTACAGCGATTGGCCCTTATTTATCGATTCTGCAACTAGGTAAAGATTTAGATCGCTTCAAAAATCTGGTCCTGGTGCACGCCGCACGTTATGCCGCCGACTTAAGCTATTTGCCACTGATGCAGGAACTGGAAAAACGCTACGAAGGAAAACTGCGCATTCAGACGGTGGTCAGTCGGGAAACGGCAGCGGGGTCGCTCACCGGACGGATACCGGCATTAATTGAAAGTGGGGAACTGGAAAGCACGATTGGCCTGCCGATGAATAAAGAAACCAGCCATGTGATGCTGTGCGGCAATCCACAGATGGTGCGCGATACACAACAGTTGCTGAAAGAGACCCGGCAGATGACGAAACATTTACGTCGCCGACCGGGCCATATGACAGCGGAGCATTACTGGTAA", + "dna_sequence_length": 747, + "functions": [ + "ferredoxin-NADP reductase", + "flavodoxin reductase" + ], + "id": "CDS_3852", + "location": [ + [ + "NC_000913", + 4114472, + "-", + 747 + ] + ], + "md5": "82d34d4d81f7f44c1818be4d3f6e8fde", + "parent_gene": "", + "protein_md5": "24d4383590b10e541924f1108f82f3ab", + "protein_translation": "MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEHYW", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012821" + ], + [ + "gene_synonym", + "ECK3917" + ], + [ + "gene_synonym", + "EcoGene:EG11517" + ], + [ + "gene_synonym", + "GI:16131763" + ], + [ + "gene_synonym", + "GeneID:948424" + ], + [ + "gene_synonym", + "JW3896" + ], + [ + "gene_synonym", + "NP_418360.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C9" + ], + [ + "gene_synonym", + "b3925" + ], + [ + "gene_synonym", + "glpX" + ] + ], + "dna_sequence": "ATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTACAAATGGTTAGGACGCGGCGATAAAAACACCGCGGACGGCGCGGCGGTAAACGCCATGCGTATTATGCTCAACCAGGTCAACATTGACGGCACCATCGTCATTGGTGAAGGTGAAATCGACGAAGCACCGATGCTCTACATTGGTGAAAAAGTCGGTACTGGTCGCGGCGACGCGGTAGATATTGCTGTTGATCCGATTGAAGGCACGCGCATGACGGCGATGGGCCAGGCTAACGCGCTGGCGGTGCTGGCAGTAGGCGATAAAGGCTGCTTCCTCAATGCGCCGGATATGTATATGGAGAAGCTGATTGTCGGGCCGGGAGCCAAAGGCACCATTGATCTGAACCTGCCGCTGGCGGATAACCTGCGCAATGTAGCGGCGGCGCTCGGCAAACCGTTGAGCGAACTGACGGTAACGATTCTGGCTAAACCACGCCACGATGCCGTTATCGCTGAAATGCAGCAACTCGGCGTACGCGTATTTGCTATTCCGGACGGCGACGTTGCGGCCTCAATTCTCACCTGTATGCCAGACAGCGAAGTTGACGTGCTGTACGGTATTGGTGGCGCGCCGGAAGGCGTAGTTTCTGCGGCGGTGATCCGCGCATTAGATGGCGACATGAACGGTCGTCTGCTGGCGCGTCATGACGTCAAAGGCGACAACGAAGAGAATCGTCGCATTGGCGAGCAGGAGCTGGCACGCTGCAAAGCGATGGGCATCGAAGCCGGTAAAGTATTGCGCCTGGGCGATATGGCGCGCAGCGATAACGTCATCTTCTCTGCCACCGGTATTACCAAAGGCGATCTGCTGGAAGGCATTAGCCGCAAAGGCAATATCGCGACTACCGAAACGCTGCTGATCCGCGGCAAGTCACGCACCATTCGCCGCATTCAGTCCATCCACTATCTGGATCGCAAAGACCCGGAAATGCAGGTGCACATCCTCTGA", + "dna_sequence_length": 1011, + "functions": [ + "fructose 1,6-bisphosphatase II" + ], + "id": "CDS_3853", + "location": [ + [ + "NC_000913", + 4115579, + "-", + 1011 + ] + ], + "md5": "6389aa079e3c0fa1f3fd98d601e85889", + "parent_gene": "", + "protein_md5": "94a3eaf73454c249034860575bc1b891", + "protein_translation": "MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVHIL", + "protein_translation_length": 336, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012825" + ], + [ + "gene_synonym", + "ECK3918" + ], + [ + "gene_synonym", + "EcoGene:EG10398" + ], + [ + "gene_synonym", + "GI:16131764" + ], + [ + "gene_synonym", + "GeneID:948423" + ], + [ + "gene_synonym", + "JW3897" + ], + [ + "gene_synonym", + "NP_418361.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6F3" + ], + [ + "gene_synonym", + "b3926" + ], + [ + "gene_synonym", + "glpK" + ] + ], + "dna_sequence": "ATGACTGAAAAAAAATATATCGTTGCGCTCGACCAGGGCACCACCAGCTCCCGCGCGGTCGTAATGGATCACGATGCCAATATCATTAGCGTGTCGCAGCGCGAATTTGAGCAAATCTACCCAAAACCAGGTTGGGTAGAACACGACCCAATGGAAATCTGGGCCACCCAAAGCTCCACGCTGGTAGAAGTGCTGGCGAAAGCCGATATCAGTTCCGATCAAATTGCAGCTATCGGTATTACGAACCAGCGTGAAACCACTATTGTCTGGGAAAAAGAAACCGGCAAGCCTATCTATAACGCCATTGTCTGGCAGTGCCGTCGTACCGCAGAAATCTGCGAGCATTTAAAACGTGACGGTTTAGAAGATTATATCCGCAGCAATACCGGTCTGGTGATTGACCCGTACTTTTCTGGCACCAAAGTGAAGTGGATCCTCGACCATGTGGAAGGCTCTCGCGAGCGTGCACGTCGTGGTGAATTGCTGTTTGGTACGGTTGATACGTGGCTTATCTGGAAAATGACTCAGGGCCGTGTCCATGTGACCGATTACACCAACGCCTCTCGTACCATGTTGTTCAACATCCATACCCTGGACTGGGACGACAAAATGCTGGAAGTGCTGGATATTCCGCGCGAGATGCTGCCAGAAGTGCGTCGTTCTTCCGAAGTATACGGTCAGACTAACATTGGCGGCAAAGGCGGCACGCGTATTCCAATCTCCGGGATCGCCGGTGACCAGCAGGCCGCGCTGTTTGGTCAGTTGTGCGTGAAAGAAGGGATGGCGAAGAACACCTATGGCACTGGCTGCTTTATGCTGATGAACACTGGCGAGAAAGCGGTGAAATCAGAAAACGGCCTGCTGACCACCATCGCCTGCGGCCCGACTGGCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAATGAAGTTGATTAACGACGCCTACGATTCCGAATATTTCGCCACCAAAGTGCAAAACACCAATGGTGTGTATGTGGTTCCGGCATTTACCGGGCTGGGTGCGCCGTACTGGGACCCGTATGCGCGCGGGGCGATTTTCGGTCTGACTCGTGGGGTGAACGCTAACCACATTATACGCGCGACGCTGGAGTCTATTGCTTATCAGACGCGTGACGTGCTGGAAGCGATGCAGGCCGACTCTGGTATCCGTCTGCACGCCCTGCGCGTGGATGGTGGCGCAGTAGCAAACAATTTCCTGATGCAGTTCCAGTCCGATATTCTCGGCACCCGCGTTGAGCGCCCGGAAGTGCGCGAAGTCACCGCATTGGGTGCGGCCTATCTCGCAGGCCTGGCGGTTGGCTTCTGGCAGAACCTCGACGAGCTGCAAGAGAAAGCGGTGATTGAGCGCGAGTTCCGTCCAGGCATCGAAACCACTGAGCGTAATTACCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAA", + "dna_sequence_length": 1509, + "functions": [ + "glycerol kinase" + ], + "id": "CDS_3854", + "location": [ + [ + "NC_000913", + 4117222, + "-", + 1509 + ] + ], + "md5": "568949e04e5cf92d5947e72cc3f9e537", + "parent_gene": "", + "protein_md5": "5209eac880717d0df7e3e72045ac99b9", + "protein_translation": "MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE", + "protein_translation_length": 502, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012828" + ], + [ + "gene_synonym", + "ECK3919" + ], + [ + "gene_synonym", + "EcoGene:EG10396" + ], + [ + "gene_synonym", + "GI:16131765" + ], + [ + "gene_synonym", + "GeneID:948422" + ], + [ + "gene_synonym", + "JW3898" + ], + [ + "gene_synonym", + "NP_418362.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER0" + ], + [ + "gene_synonym", + "b3927" + ], + [ + "gene_synonym", + "glpF" + ] + ], + "dna_sequence": "ATGAGTCAAACATCAACCTTGAAAGGCCAGTGCATTGCTGAATTCCTCGGTACCGGGTTGTTGATTTTCTTCGGTGTGGGTTGCGTTGCAGCACTAAAAGTCGCTGGTGCGTCTTTTGGTCAGTGGGAAATCAGTGTCATTTGGGGACTGGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGTTTCACAAGTTGCCGGCGCTTTCTGTGCTGCGGCTTTAGTTTACGGGCTTTACTACAATTTATTTTTCGACTTCGAGCAGACTCATCACATTGTTCGCGGCAGCGTTGAAAGTGTTGATCTGGCTGGCACTTTCTCTACTTACCCTAATCCTCATATCAATTTTGTGCAGGCTTTCGCAGTTGAGATGGTGATTACCGCTATTCTGATGGGGCTGATCCTGGCGTTAACGGACGATGGCAACGGTGTACCACGCGGCCCTTTGGCTCCCTTGCTGATTGGTCTACTGATTGCGGTCATTGGCGCATCTATGGGCCCATTGACAGGTTTTGCCATGAACCCAGCGCGTGACTTCGGTCCGAAAGTCTTTGCCTGGCTGGCGGGCTGGGGCAATGTCGCCTTTACCGGCGGCAGAGACATTCCTTACTTCCTGGTGCCGCTTTTCGGCCCTATCGTTGGCGCGATTGTAGGTGCATTTGCCTACCGCAAACTGATTGGTCGCCATTTGCCTTGCGATATCTGTGTTGTGGAAGAAAAGGAAACCACAACTCCTTCAGAACAAAAAGCTTCGCTGTAA", + "dna_sequence_length": 846, + "functions": [ + "glycerol facilitator" + ], + "id": "CDS_3855", + "location": [ + [ + "NC_000913", + 4118090, + "-", + 846 + ] + ], + "md5": "151d63d7aafbe1def2d95c40249f69ee", + "parent_gene": "", + "protein_md5": "68d36bdf68da9f1e979bef074c6ede8a", + "protein_translation": "MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSEQKASL", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012835" + ], + [ + "gene_synonym", + "ECK3920" + ], + [ + "gene_synonym", + "EcoGene:EG11878" + ], + [ + "gene_synonym", + "GI:16131766" + ], + [ + "gene_synonym", + "GeneID:948420" + ], + [ + "gene_synonym", + "JW3899" + ], + [ + "gene_synonym", + "NP_418363.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF36" + ], + [ + "gene_synonym", + "b3928" + ], + [ + "gene_synonym", + "yiiU" + ], + [ + "gene_synonym", + "zapB" + ] + ], + "dna_sequence": "ATGACAATGTCATTAGAAGTGTTTGAGAAACTGGAAGCAAAAGTACAGCAGGCGATTGATACCATCACTCTGTTGCAGATGGAAATCGAAGAGCTGAAAGAAAAAAACAACTCACTGTCGCAGGAAGTTCAAAATGCCCAGCATCAGCGCGAAGAGCTGGAGCGTGAGAACAACCATCTGAAAGAACAGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGA", + "dna_sequence_length": 246, + "functions": [ + "FtsZ stabilizer, septal ring assembly factor, cell division stimulator" + ], + "id": "CDS_3856", + "location": [ + [ + "NC_000913", + 4118515, + "+", + 246 + ] + ], + "md5": "dab98a9ed088cb06d7b019e190e00fa1", + "parent_gene": "", + "protein_md5": "d08945678e24c1ed1ad25fc20c27125f", + "protein_translation": "MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012837" + ], + [ + "gene_synonym", + "ECK3921" + ], + [ + "gene_synonym", + "EcoGene:EG11879" + ], + [ + "gene_synonym", + "GI:16131767" + ], + [ + "gene_synonym", + "GeneID:948419" + ], + [ + "gene_synonym", + "JW3900" + ], + [ + "gene_synonym", + "NP_418364.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8R0" + ], + [ + "gene_synonym", + "b3929" + ], + [ + "gene_synonym", + "menG" + ], + [ + "gene_synonym", + "rraA" + ], + [ + "gene_synonym", + "yiiV" + ] + ], + "dna_sequence": "ATGAAATACGATACTTCCGAGCTTTGTGACATCTATCAAGAAGATGTTAACGTCGTGGAACCGCTGTTCTCCAACTTTGGCGGACGGGCGTCGTTTGGCGGACAAATAATCACGGTAAAATGTTTCGAGGACAACGGGTTGCTGTACGATCTGCTCGAACAGAATGGCCGTGGTCGTGTTCTTGTCGTCGATGGCGGTGGTTCTGTTCGTCGCGCACTGGTCGATGCTGAACTGGCGCGTCTGGCAGTACAAAATGAATGGGAAGGTCTGGTCATTTACGGCGCGGTGCGTCAGGTAGATGACCTGGAAGAGTTGGATATCGGCATCCAGGCGATGGCGGCAATTCCGGTTGGTGCCGCTGGCGAAGGCATTGGCGAAAGCGATGTCCGCGTCAATTTTGGCGGTGTCACCTTCTTCTCCGGCGACCATCTTTATGCCGACAATACCGGGATTATTCTTTCAGAAGATCCGCTGGATATTGAATGA", + "dna_sequence_length": 486, + "functions": [ + "ribonuclease E (RNase E) inhibitor protein" + ], + "id": "CDS_3857", + "location": [ + [ + "NC_000913", + 4119330, + "-", + 486 + ] + ], + "md5": "3d12285a840a9a67f456c344aa0e1e35", + "parent_gene": "", + "protein_md5": "09de6da6b58575e022e59620ac8a4c4e", + "protein_translation": "MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE", + "protein_translation_length": 161, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012841" + ], + [ + "gene_synonym", + "ECK3922" + ], + [ + "gene_synonym", + "EcoGene:EG11880" + ], + [ + "gene_synonym", + "GI:16131768" + ], + [ + "gene_synonym", + "GeneID:948418" + ], + [ + "gene_synonym", + "JW3901" + ], + [ + "gene_synonym", + "NP_418365.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32166" + ], + [ + "gene_synonym", + "b3930" + ], + [ + "gene_synonym", + "menA" + ], + [ + "gene_synonym", + "yiiW" + ] + ], + "dna_sequence": "ATGACTGAACAACAAATTAGCCGAACTCAGGCGTGGCTGGAAAGTTTACGACCTAAAACCCTCCCCCTCGCCTTTGCTGCAATTATCGTCGGGACAGCGCTGGCATGGTGGCAAGGTCACTTCGATCCGCTGGTCGCCCTGCTGGCACTAATTACCGCCGGGCTATTACAGATCCTTTCTAACCTCGCCAATGATTACGGCGATGCGGTAAAAGGCAGCGATAAACCTGACCGCATTGGGCCGCTACGCGGCATGCAAAAAGGGGTCATTACCCAGCAAGAGATGAAACGGGCGCTCATTATTACCGTCGTGCTCATCTGTCTCTCCGGGCTGGCACTGGTTGCAGTGGCATGCCATACGCTGGCCGATTTTGTCGGTTTCCTGATTCTTGGCGGGTTGTCGATCATTGCCGCTATCACCTACACCGTGGGCAATCGTCCTTATGGTTATATCGGTCTGGGTGATATTTCCGTACTGGTTTTCTTTGGCTGGTTGAGTGTCATGGGGAGCTGGTATTTACAGGCTCATACATTGATTCCGGCACTGATCCTTCCGGCGACCGCATGCGGCCTGCTGGCAACGGCAGTACTGAATATTAATAACCTGCGTGATATCAATAGCGACCGCGAAAATGGCAAAAACACGCTGGTGGTGCGCTTAGGTGAAGTGAACGCGCGTCGTTATCATGCCTGCCTGCTGATGGGCTCGCTGGTGTGTCTGGCGCTGTTTAATCTCTTTTCGCTGCATAGCCTGTGGGGCTGGCTGTTCCTGCTGGCGGCACCATTACTGGTGAAGCAAGCCCGTTATGTGATGCGGGAAATGGACCCGGTGGCGATGCGACCAATGCTGGAACGTACTGTCAAGGGAGCGTTACTGACTAACCTGCTGTTTGTTTTAGGGATATTCCTAAGCCAGTGGGCAGCATAA", + "dna_sequence_length": 927, + "functions": [ + "1,4-dihydroxy-2-naphthoate octaprenyltransferase" + ], + "id": "CDS_3858", + "location": [ + [ + "NC_000913", + 4120349, + "-", + 927 + ] + ], + "md5": "35ced9a22b360041910e05303675362d", + "parent_gene": "", + "protein_md5": "11479371a3ebfb9010278baf71307750", + "protein_translation": "MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012843" + ], + [ + "gene_synonym", + "ECK3923" + ], + [ + "gene_synonym", + "EcoGene:EG11881" + ], + [ + "gene_synonym", + "GI:16131769" + ], + [ + "gene_synonym", + "GeneID:948430" + ], + [ + "gene_synonym", + "JW3902" + ], + [ + "gene_synonym", + "NP_418366.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6H5" + ], + [ + "gene_synonym", + "b3931" + ], + [ + "gene_synonym", + "clpY" + ], + [ + "gene_synonym", + "hslU" + ], + [ + "gene_synonym", + "htpI" + ] + ], + "dna_sequence": "ATGTCTGAAATGACCCCACGCGAAATCGTCAGCGAACTGGATAAGCACATCATCGGCCAGGACAACGCCAAGCGTTCTGTGGCGATTGCTCTGCGTAACCGCTGGCGTCGCATGCAGCTCAACGAAGAGCTGCGCCATGAAGTGACCCCGAAAAATATCCTGATGATCGGCCCGACCGGTGTCGGTAAAACTGAAATCGCCCGTCGTCTGGCTAAGCTGGCGAATGCGCCGTTCATCAAAGTTGAAGCGACCAAATTCACCGAAGTGGGCTACGTCGGTAAGGAAGTGGATTCTATTATTCGCGATCTGACCGATGCCGCCGTGAAAATGGTACGCGTCCAGGCTATCGAGAAAAACCGTTATCGCGCTGAAGAACTGGCAGAAGAACGTATTCTCGACGTGCTGATCCCACCTGCTAAAAACAACTGGGGACAGACCGAACAGCAGCAGGAACCGTCCGCTGCTCGTCAGGCATTCCGCAAAAAACTGCGTGAAGGCCAGCTTGATGACAAAGAAATCGAGATCGATCTTGCCGCAGCACCGATGGGCGTTGAAATTATGGCTCCTCCGGGCATGGAAGAGATGACCAGCCAGCTGCAGTCCATGTTCCAGAACCTGGGCGGCCAGAAGCAAAAAGCGCGTAAGCTGAAAATCAAAGACGCCATGAAGCTGCTGATTGAAGAAGAAGCGGCGAAACTGGTGAACCCGGAAGAGCTGAAGCAAGACGCTATCGACGCTGTTGAGCAGCACGGGATCGTGTTTATCGACGAAATCGACAAAATCTGTAAGCGCGGCGAGTCTTCCGGTCCGGATGTTTCTCGTGAAGGCGTTCAGCGTGACCTGCTGCCGCTGGTAGAAGGTTGCACCGTTTCCACCAAACACGGGATGGTCAAAACTGACCACATTCTGTTTATCGCTTCTGGCGCGTTCCAGATTGCGAAACCGTCTGACCTGATCCCGGAACTGCAAGGTCGTCTGCCAATCCGCGTTGAACTGCAGGCGCTGACCACCAGCGACTTCGAGCGTATTCTGACCGAGCCGAATGCCTCTATCACCGTGCAGTACAAAGCACTGATGGCGACTGAAGGCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAGGTGAACGAATCTACCGAAAACATCGGTGCTCGTCGTTTACACACTGTTCTGGAGCGTTTAATGGAAGAGATTTCCTACGACGCCAGCGATTTAAGCGGTCAAAATATCACTATTGACGCAGATTATGTGAGCAAACATCTGGATGCGTTGGTGGCAGATGAAGATCTGAGCCGTTTTATCCTATAA", + "dna_sequence_length": 1332, + "functions": [ + "molecular chaperone and ATPase component of HslUV protease" + ], + "id": "CDS_3859", + "location": [ + [ + "NC_000913", + 4121747, + "-", + 1332 + ] + ], + "md5": "1b099d99d10137e66d958d882ef86d56", + "parent_gene": "", + "protein_md5": "4305fb1988a41d68599001842b2345ea", + "protein_translation": "MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012845" + ], + [ + "gene_synonym", + "ECK3924" + ], + [ + "gene_synonym", + "EcoGene:EG11676" + ], + [ + "gene_synonym", + "GI:16131770" + ], + [ + "gene_synonym", + "GeneID:948429" + ], + [ + "gene_synonym", + "JW3903" + ], + [ + "gene_synonym", + "NP_418367.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7B8" + ], + [ + "gene_synonym", + "b3932" + ], + [ + "gene_synonym", + "clpQ" + ], + [ + "gene_synonym", + "hslV" + ], + [ + "gene_synonym", + "htpO" + ], + [ + "gene_synonym", + "yiiC" + ] + ], + "dna_sequence": "GTGACAACTATAGTAAGCGTACGCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGTACTGCGGATGCTTTTACGCTGTTCGAACTGTTTGAACGTAAACTGGAAATGCATCAGGGCCATCTGGTCAAAGCCGCCGTTGAGCTGGCAAAAGACTGGCGTACCGATCGCATGCTGCGCAAACTTGAAGCACTGCTGGCAGTCGCGGATGAAACTGCATCGCTTATCATCACCGGTAACGGTGACGTGGTGCAGCCAGAAAACGATCTTATTGCTATCGGCTCCGGCGGCCCTTACGCCCAGGCTGCGGCGCGCGCGCTGTTAGAAAACACTGAACTTAGCGCCCGTGAAATTGCTGAAAAGGCGTTGGATATTGCAGGCGACATTTGCATCTATACCAACCATTTCCACACCATCGAAGAATTAAGCTACAAAGCGTAA", + "dna_sequence_length": 531, + "functions": [ + "peptidase component of the HslUV protease" + ], + "id": "CDS_3860", + "location": [ + [ + "NC_000913", + 4122287, + "-", + 531 + ] + ], + "md5": "5c7ef087b11ad4481233ebd71e7bb7f1", + "parent_gene": "", + "protein_md5": "bd628120a237ee4e5d7552d98e2ea191", + "protein_translation": "MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKA", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012850" + ], + [ + "gene_synonym", + "ECK3925" + ], + [ + "gene_synonym", + "EcoGene:EG11529" + ], + [ + "gene_synonym", + "GI:16131771" + ], + [ + "gene_synonym", + "GeneID:948428" + ], + [ + "gene_synonym", + "JW3904" + ], + [ + "gene_synonym", + "NP_418368.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29131" + ], + [ + "gene_synonym", + "b3933" + ], + [ + "gene_synonym", + "ftsN" + ], + [ + "gene_synonym", + "msgA" + ] + ], + "dna_sequence": "GTGGCACAACGAGATTATGTACGCCGCAGCCAACCGGCACCTTCGCGGCGAAAAAAGAGCACCTCACGGAAAAAGCAACGAAATCTGCCTGCGGTTTCTCCCGCTATGGTCGCTATTGCTGCCGCCGTTCTTGTGACCTTTATCGGTGGTCTGTACTTCATTACGCATCACAAGAAAGAAGAGTCCGAGACGCTGCAAAGCCAGAAAGTGACCGGAAACGGACTACCACCAAAACCAGAAGAACGCTGGCGCTACATTAAAGAGCTGGAAAGTCGCCAGCCGGGAGTGCGTGCGCCCACAGAACCTTCTGCCGGTGGTGAAGTGAAAACGCCGGAGCAACTGACACCAGAACAACGTCAGCTTCTTGAACAAATGCAGGCTGATATGCGCCAGCAGCCAACGCAGCTGGTTGAAGTTCCGTGGAATGAACAGACGCCGGAACAGCGTCAGCAAACGCTACAGCGCCAACGTCAGGCGCAGCAATTAGCGGAACAGCAACGCCTGGCTCAGCAGTCGCGTACGACTGAACAAAGCTGGCAGCAGCAGACGCGTACGTCGCAAGCCGCACCGGTACAGGCGCAACCGCGCCAGTCTAAACCGGCTTCTTCTCAGCAGCCGTACCAGGATCTGCTGCAAACTCCTGCGCACACGACTGCGCAGTCGAAGCCGCAGCAAGCTGCGCCAGTTGCTCGTGCCGCTGACGCGCCAAAACCGACGGCGGAGAAAAAAGACGAACGCCGCTGGATGGTGCAGTGCGGTTCGTTCAGAGGCGCGGAACAGGCAGAGACGGTACGTGCTCAGCTGGCGTTCGAAGGCTTTGACTCGAAAATCACCACCAACAATGGCTGGAATCGTGTGGTCATTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGA", + "dna_sequence_length": 960, + "functions": [ + "essential cell division protein" + ], + "id": "CDS_3861", + "location": [ + [ + "NC_000913", + 4123339, + "-", + 960 + ] + ], + "md5": "6c0d15feb5826a3f5e5c6ab8ef170774", + "parent_gene": "", + "protein_md5": "670ff182e4602682eb9dd5ea2320b1ac", + "protein_translation": "MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVLVTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEPSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASSQQPYQDLLQTPAHTTAQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012853" + ], + [ + "gene_synonym", + "ECK3926" + ], + [ + "gene_synonym", + "EcoGene:EG10200" + ], + [ + "gene_synonym", + "GI:16131772" + ], + [ + "gene_synonym", + "GeneID:948427" + ], + [ + "gene_synonym", + "JW3905" + ], + [ + "gene_synonym", + "NP_418369.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACN7" + ], + [ + "gene_synonym", + "b3934" + ], + [ + "gene_synonym", + "cytR" + ] + ], + "dna_sequence": "GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTCCCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATTTACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCCTTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCATCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGCTGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCGGCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTTGATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGACAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTTGGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA", + "dna_sequence_length": 1026, + "functions": [ + "Anti-activator for CytR-CRP nucleoside utilization regulon" + ], + "id": "CDS_3862", + "location": [ + [ + "NC_000913", + 4124456, + "-", + 1026 + ] + ], + "md5": "182a52bee71aa29744c5b714b135f07b", + "parent_gene": "", + "protein_md5": "c829c282ec820dc3a5445a74e559a7d9", + "protein_translation": "MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012860" + ], + [ + "gene_synonym", + "ECK3927" + ], + [ + "gene_synonym", + "EcoGene:EG10763" + ], + [ + "gene_synonym", + "GI:16131773" + ], + [ + "gene_synonym", + "GeneID:948426" + ], + [ + "gene_synonym", + "JW3906" + ], + [ + "gene_synonym", + "NP_418370.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17888" + ], + [ + "gene_synonym", + "b3935" + ], + [ + "gene_synonym", + "priA" + ], + [ + "gene_synonym", + "srgA" + ] + ], + "dna_sequence": "ATGCCCGTTGCCCACGTTGCCTTGCCCGTTCCGCTTCCTCGTACCTTTGACTATCTGCTGCCAGAAGGCATGACGGTTAAAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCGATGCCAGCGAACTGCCGCTCAATGAGCTAAAAGCGGTAGTCGAAGTGCTGGATAGTGAGCCGGTGTTTACTCACTCCGTCTGGCGATTGCTGCTATGGGCGGCAGATTACTATCATCATCCGATTGGCGATGTGCTGTTTCATGCCTTGCCGATTTTACTACGCCAGGGGCGGCCTGCGGCGAACGCGCCGATGTGGTACTGGTTTGCCACTGAACAAGGCCAGGCGGTGGATCTGAACAGCCTGAAACGCTCCCCCAAGCAACAACAGGCGCTGGCGGCGTTACGGCAAGGCAAAATCTGGCGCGACCAGGTCGCCACGCTCGAATTTAATGATGCCGCGTTGCAGGCGCTACGCAAAAAAGGTCTGTGTGATTTAGCAAGTGAAACACCAGAGTTTAGCGACTGGCGAACGAACTATGCCGTTTCTGGTGAGCGGTTGCGATTGAATACCGAACAGGCCACCGCCGTTGGCGCAATTCATAGCGCGGCAGATACTTTTTCTGCCTGGCTGCTGGCGGGCGTTACCGGTTCCGGTAAAACGGAGGTTTATCTCAGCGTACTGGAAAACGTGCTCGCTCAGGGCAAACAGGCGCTGGTGATGGTGCCGGAAATCGGCCTGACACCGCAAACTATCGCCCGTTTTCGTGAACGTTTTAATGCCCCCGTGGAAGTTCTGCATTCCGGCCTGAACGACAGCGAGCGTCTTTCGGCGTGGCTGAAAGCGAAAAATGGTGAGGCGGCGATTGTGATCGGCACCCGCTCCGCGCTGTTTACGCCGTTTAAAAATCTCGGCGTGATTGTCATTGATGAAGAGCACGACAGCTCCTACAAGCAGCAGGAAGGCTGGCGCTATCATGCCCGCGACCTGGCGGTGTATCGTGCGCACAGCGAGCAAATCCCGATTATTCTTGGCTCCGCAACGCCCGCGCTGGAAACGTTATGCAACGTCCAGCAGAAAAAATACCGCCTGCTGCGCCTGACCCGTCGGGCAGGGAATGCGCGTCCGGCAATTCAACATGTGCTGGATTTAAAAGGTCAGAAGGTGCAGGCAGGTCTGGCTCCGGCGTTAATCACTCGTATGCGCCAGCATTTACAGGCTGATAACCAGGTCATTCTCTTTCTTAACCGCCGTGGCTTTGCGCCTGCACTGCTGTGCCACGACTGTGGCTGGATTGCCGAATGCCCACGTTGCGATCACTACTACACGCTGCATCAGGCGCAGCACCATCTGCGCTGCCACCACTGTGACAGTCAGCGTCCGGTGCCGCGCCAGTGCCCTTCCTGCGGTTCCACGCACCTGGTCCCCGTGGGGCTGGGCACCGAACAGCTTGAACAGACGCTCGCGCCGTTGTTCCCCGGCGTGCCCATTTCTCGTATCGACCGCGATACCACCAGCCGCAAAGGGGCGCTGGAACAGCAACTGGCAGAAGTACATCGCGGCGGCGCGCGGATTTTGATTGGTACACAAATGCTGGCGAAAGGTCACCATTTCCCGGATGTGACGCTGGTTGCATTACTGGACGTGGACGGCGCGCTGTTTTCTGCCGATTTTCGCTCGGCAGAGCGTTTCGCTCAGCTTTACACCCAGGTCGCCGGTCGTGCCGGGCGTGCGGGTAAACAGGGCGAAGTGGTGCTGCAAACGCACCATCCGGAACATCCTCTGTTGCAAACGTTGCTCTATAAAGGCTACGACGCCTTTGCCGAACAGGCGCTGGCTGAGCGGCGAATGATGCAGCTACCGCCGTGGACCAGCCATGTGATTGTGCGTGCGGAAGATCATAACAATCAGCACGCGCCATTGTTCCTGCAACAACTGCGTAATCTGATCCTCTCCAGCCCACTGGCAGACGAGAAACTGTGGGTTCTCGGTCCGGTTCCGGCTCTGGCACCTAAACGTGGCGGTCGCTGGCGCTGGCAGATATTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAA", + "dna_sequence_length": 2199, + "functions": [ + "Primosome factor n' (replication factor Y)" + ], + "id": "CDS_3863", + "location": [ + [ + "NC_000913", + 4126810, + "-", + 2199 + ] + ], + "md5": "23d516085d1af971333401b5d016ee06", + "parent_gene": "", + "protein_md5": "048923b337e7c3413696e4a43a4e9892", + "protein_translation": "MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG", + "protein_translation_length": 732, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012867" + ], + [ + "gene_synonym", + "ECK3928" + ], + [ + "gene_synonym", + "EcoGene:EG10889" + ], + [ + "gene_synonym", + "GI:16131774" + ], + [ + "gene_synonym", + "GeneID:948425" + ], + [ + "gene_synonym", + "JW3907" + ], + [ + "gene_synonym", + "NP_418371.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7M9" + ], + [ + "gene_synonym", + "b3936" + ], + [ + "gene_synonym", + "rpmE" + ] + ], + "dna_sequence": "ATGAAAAAAGATATTCACCCGAAATACGAAGAAATTACTGCTAGCTGCTCTTGCGGTAACGTAATGAAAATCCGCTCCACCGTTGGTCATGACCTGAACCTCGACGTGTGCAGCAAGTGCCACCCGTTCTTCACTGGCAAACAGCGTGATGTTGCTACCGGTGGCCGTGTTGACCGCTTCAACAAGCGTTTCAACATCCCGGGCAGCAAATAA", + "dna_sequence_length": 213, + "functions": [ + "50S ribosomal subunit protein L31" + ], + "id": "CDS_3864", + "location": [ + [ + "NC_000913", + 4127013, + "+", + 213 + ] + ], + "md5": "b366f0c3b4c05cb02ee7dda56631c588", + "parent_gene": "", + "protein_md5": "091bb03c9d1e8734ac0da1ad6ed169e2", + "protein_translation": "MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012869" + ], + [ + "gene_synonym", + "ECK3929" + ], + [ + "gene_synonym", + "EcoGene:EG11882" + ], + [ + "gene_synonym", + "GI:16131775" + ], + [ + "gene_synonym", + "GeneID:948436" + ], + [ + "gene_synonym", + "JW3908" + ], + [ + "gene_synonym", + "NP_418372.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32167" + ], + [ + "gene_synonym", + "b3937" + ], + [ + "gene_synonym", + "yiiX" + ] + ], + "dna_sequence": "ATGAAAAACAGGCTGCTGATCCTCAGCCTGCTGGTTTCTGTACCTGCCTTTGCCTGGCAGCCACAAACCGGCGACATCATCTTTCAGATCTCTCGCTCATCGCAAAGTAAAGCGATCCAACTGGCGACCCATACCGATTATAGCCACACCGGTATGCTGGTGATACGCAACAAAAAGCCCTACGTTTTTGAAGCAGTCGGCCCGGTGAAATACACCCCGCTCAAGCAGTGGATCGCCCATGGTGAAAAGGGCAAATACGTTGTTCGCCGCGTTGAAGGCGGACTGAGTGTTGAACAACAGCAAAAACTGGCGCAAACGGCAAAACGTTATCTCGGTAAACCGTATGATTTCAGCTTCTCATGGAGCGACGATCGCCAGTACTGTTCGGAAGTGGTGTGGAAGGTTTACCAGAACGCGCTGGGAATGCGCGTGGGCGAGCAGCAGAAGTTGAAAGAGTTCGACCTGAGCAGCCCACAAGTTCAGGCAAAGCTCAAAGAACGTTACGGCAAGAATATTCCGCTTGAGGAAACGGTGGTCTCGCCACAAGCCGTTTTCGATGCGCCACAACTCACCACGGTCGCCAAAGAATGGCCGCTGTTTTCGTGGTAA", + "dna_sequence_length": 609, + "functions": [ + "putative lipid binding hydrolase, DUF830 family protein" + ], + "id": "CDS_3865", + "location": [ + [ + "NC_000913", + 4127894, + "-", + 609 + ] + ], + "md5": "2da295556f45a87638539902fb967052", + "parent_gene": "", + "protein_md5": "0af7e31a18234f965060b62674d30a37", + "protein_translation": "MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHTDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSSPQVQAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW", + "protein_translation_length": 202, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012874" + ], + [ + "gene_synonym", + "ECK3930" + ], + [ + "gene_synonym", + "EcoGene:EG10588" + ], + [ + "gene_synonym", + "GI:16131776" + ], + [ + "gene_synonym", + "GeneID:948435" + ], + [ + "gene_synonym", + "JW3909" + ], + [ + "gene_synonym", + "NP_418373.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8U6" + ], + [ + "gene_synonym", + "b3938" + ], + [ + "gene_synonym", + "metJ" + ] + ], + "dna_sequence": "ATGGCTGAATGGAGCGGCGAATATATCAGCCCATACGCTGAGCACGGCAAGAAGAGTGAACAAGTCAAAAAGATTACGGTTTCCATTCCTCTTAAGGTGTTAAAAATCCTCACCGATGAACGCACGCGTCGTCAGGTGAACAACCTGCGTCACGCTACCAACAGCGAGCTGCTGTGCGAAGCGTTTCTGCATGCCTTTACCGGGCAACCTTTGCCGGATGATGCCGATCTGCGTAAAGAGCGCAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAA", + "dna_sequence_length": 318, + "functions": [ + "transcriptional repressor, S-adenosylmethionine-binding" + ], + "id": "CDS_3866", + "location": [ + [ + "NC_000913", + 4128395, + "-", + 318 + ] + ], + "md5": "e0df61c56f660f55dd971d77193c3827", + "parent_gene": "", + "protein_md5": "779729355b39f0a9064b8cd257dc0f03", + "protein_translation": "MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012887" + ], + [ + "gene_synonym", + "ECK3931" + ], + [ + "gene_synonym", + "EcoGene:EG10582" + ], + [ + "gene_synonym", + "GI:16131777" + ], + [ + "gene_synonym", + "GeneID:948434" + ], + [ + "gene_synonym", + "JW3910" + ], + [ + "gene_synonym", + "NP_418374.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00935" + ], + [ + "gene_synonym", + "b3939" + ], + [ + "gene_synonym", + "met-1" + ], + [ + "gene_synonym", + "metB" + ] + ], + "dna_sequence": "ATGACGCGTAAACAGGCCACCATCGCAGTGCGTAGCGGGTTAAATGACGACGAACAGTATGGTTGCGTTGTCCCACCGATCCATCTTTCCAGCACCTATAACTTTACCGGATTTAATGAACCGCGCGCGCATGATTACTCGCGTCGCGGCAACCCAACGCGCGATGTGGTTCAGCGTGCGCTGGCAGAACTGGAAGGTGGTGCTGGTGCAGTACTTACTAATACCGGCATGTCCGCGATTCACCTGGTAACGACCGTCTTTTTGAAACCTGGCGATCTGCTGGTTGCGCCGCACGACTGCTACGGCGGTAGCTATCGCCTGTTCGACAGTCTGGCGAAACGCGGTTGCTATCGCGTGTTGTTTGTTGATCAAGGCGATGAACAGGCATTACGGGCAGCGCTGGCAGAAAAACCCAAACTGGTACTGGTAGAAAGCCCAAGTAATCCATTGTTACGCGTCGTGGATATTGCGAAAATCTGCCATCTGGCAAGGGAAGTCGGGGCGGTGAGCGTGGTGGATAACACCTTCTTAAGCCCGGCATTACAAAATCCGCTGGCATTAGGTGCCGATCTGGTGTTGCATTCATGCACGAAATATCTGAACGGTCACTCAGACGTAGTGGCCGGCGTGGTGATTGCTAAAGACCCGGACGTTGTCACTGAACTGGCCTGGTGGGCAAACAATATTGGCGTGACGGGCGGCGCGTTTGACAGCTATCTGCTGCTACGTGGGTTGCGAACGCTGGTGCCGCGTATGGAGCTGGCGCAGCGCAACGCGCAGGCGATTGTGAAATACCTGCAAACCCAGCCGTTGGTGAAAAAACTGTATCACCCGTCGTTGCCGGAAAATCAGGGGCATGAAATTGCCGCGCGCCAGCAAAAAGGCTTTGGCGCAATGTTGAGTTTTGAACTGGATGGCGATGAGCAGACGCTGCGTCGTTTCCTGGGCGGGCTGTCGTTGTTTACGCTGGCGGAATCATTAGGGGGAGTGGAAAGTTTAATCTCTCACGCCGCAACCATGACACATGCAGGCATGGCACCAGAAGCGCGTGCTGCCGCCGGGATCTCCGAGACGCTGCTGCGTATCTCCACCGGTATTGAAGATGGCGAAGATTTAATTGCCGACCTGGAAAATGGCTTCCGGGCTGCAAACAAGGGGTAA", + "dna_sequence_length": 1161, + "functions": [ + "cystathionine gamma-synthase, PLP-dependent" + ], + "id": "CDS_3867", + "location": [ + [ + "NC_000913", + 4128672, + "+", + 1161 + ] + ], + "md5": "ab4eeaaaba11011e224966a82b20223a", + "parent_gene": "", + "protein_md5": "26a75427ac162c3017fe72015b267e14", + "protein_translation": "MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG", + "protein_translation_length": 386, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012889" + ], + [ + "gene_synonym", + "ECK3932" + ], + [ + "gene_synonym", + "EcoGene:EG10590" + ], + [ + "gene_synonym", + "GI:16131778" + ], + [ + "gene_synonym", + "GeneID:948433" + ], + [ + "gene_synonym", + "JW3911" + ], + [ + "gene_synonym", + "NP_418375.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00562" + ], + [ + "gene_synonym", + "b3940" + ], + [ + "gene_synonym", + "metL" + ], + [ + "gene_synonym", + "metM" + ] + ], + "dna_sequence": "ATGAGTGTGATTGCGCAGGCAGGGGCGAAAGGTCGTCAGCTGCATAAATTTGGTGGCAGTAGTCTGGCTGATGTGAAGTGTTATTTGCGTGTCGCGGGCATTATGGCGGAGTACTCTCAGCCTGACGATATGATGGTGGTTTCCGCCGCCGGTAGCACCACTAACCAGTTGATTAACTGGTTGAAACTAAGCCAGACCGATCGTCTCTCTGCGCATCAGGTTCAACAAACGCTGCGTCGCTATCAGTGCGATCTGATTAGCGGTCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGACCTTGAGCGCCTGGCGGCGCTGCTCGACAGCGGTATTAACGACGCAGTGTATGCGGAAGTGGTGGGCCACGGGGAAGTATGGTCGGCACGTCTGATGTCTGCGGTACTTAATCAACAAGGGCTGCCAGCGGCCTGGCTTGATGCCCGCGAGTTTTTACGCGCTGAACGCGCCGCACAACCGCAGGTTGATGAAGGGCTTTCTTACCCGTTGCTGCAACAGCTGCTGGTGCAACATCCGGGCAAACGTCTGGTGGTGACCGGATTTATCAGCCGCAACAACGCCGGTGAAACGGTGCTGCTGGGGCGTAACGGTTCCGACTATTCCGCGACACAAATCGGTGCGCTGGCGGGTGTTTCTCGCGTAACCATCTGGAGCGACGTCGCCGGGGTATACAGTGCCGACCCGCGTAAAGTGAAAGATGCCTGCCTGCTGCCGTTGCTGCGTCTGGATGAGGCCAGCGAACTGGCGCGCCTGGCGGCTCCCGTTCTTCACGCCCGTACTTTACAGCCGGTTTCTGGCAGCGAAATCGACCTGCAACTGCGCTGTAGCTACACGCCGGATCAAGGTTCCACGCGCATTGAACGCGTGCTGGCCTCCGGTACTGGTGCGCGTATTGTCACCAGCCACGATGATGTCTGTTTGATTGAGTTTCAGGTGCCCGCCAGTCAGGATTTCAAACTGGCGCATAAAGAGATCGACCAAATCCTGAAACGCGCGCAGGTACGCCCGCTGGCGGTTGGCGTACATAACGATCGCCAGTTGCTGCAATTTTGCTACACCTCAGAAGTGGCCGACAGTGCGCTGAAAATCCTCGACGAAGCGGGATTACCTGGCGAACTGCGCCTGCGTCAGGGGCTGGCGCTGGTGGCGATGGTCGGTGCAGGCGTCACCCGTAACCCGCTGCATTGCCACCGCTTCTGGCAGCAACTGAAAGGCCAGCCGGTCGAATTTACCTGGCAGTCCGATGACGGCATCAGCCTGGTGGCAGTACTGCGCACCGGCCCGACCGAAAGCCTGATTCAGGGGCTGCATCAGTCCGTCTTCCGCGCAGAAAAACGCATCGGCCTGGTATTGTTCGGTAAGGGCAATATCGGTTCCCGTTGGCTGGAACTGTTCGCCCGTGAGCAGAGCACGCTTTCGGCACGTACCGGCTTTGAGTTTGTGCTGGCAGGTGTGGTGGACAGCCGCCGCAGCCTGTTGAGCTATGACGGGCTGGACGCCAGCCGCGCGTTAGCCTTCTTCAACGATGAAGCGGTTGAGCAGGATGAAGAGTCGTTGTTCCTGTGGATGCGCGCCCATCCGTATGATGATTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTCTCCTGGCTGTTCCTGCAATTCGACGGTAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGCGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAA", + "dna_sequence_length": 2433, + "functions": [ + "Bifunctional aspartokinase/homoserine dehydrogenase 2" + ], + "id": "CDS_3868", + "location": [ + [ + "NC_000913", + 4129835, + "+", + 2433 + ] + ], + "md5": "1cd4e4dc639ee68d127f4ab941af6014", + "parent_gene": "", + "protein_md5": "aa5259f56846288964836cad322a85dc", + "protein_translation": "MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAFVSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAERAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAHKEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL", + "protein_translation_length": 810, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012897" + ], + [ + "gene_synonym", + "ECK3933" + ], + [ + "gene_synonym", + "EcoGene:EG10585" + ], + [ + "gene_synonym", + "GI:16131779" + ], + [ + "gene_synonym", + "GeneID:948432" + ], + [ + "gene_synonym", + "JW3913" + ], + [ + "gene_synonym", + "NP_418376.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEZ1" + ], + [ + "gene_synonym", + "b3941" + ], + [ + "gene_synonym", + "metF" + ] + ], + "dna_sequence": "ATGAGCTTTTTTCACGCCAGCCAGCGGGATGCCCTGAATCAGAGCCTGGCAGAAGTCCAGGGGCAGATTAACGTTTCGTTCGAGTTTTTCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAAATGTATGCTTCTGACCTGGTGACGCTGTTAAAAGAAGTGGCAGATTTCGATATCTCCGTGGCGGCGTATCCGGAAGTTCACCCGGAAGCAAAAAGCGCTCAGGCGGATTTGCTTAATCTGAAACGCAAAGTGGATGCCGGAGCCAACCGCGCGATTACTCAGTTCTTCTTCGATGTCGAAAGCTACCTGCGTTTTCGTGACCGCTGTGTATCGGCGGGCATTGATGTGGAAATTATTCCGGGAATTTTGCCGGTATCTAACTTTAAACAGGCGAAGAAATTTGCCGATATGACCAACGTGCGTATTCCGGCGTGGATGGCGCAAATGTTCGACGGTCTGGATGATGATGCCGAAACCCGCAAACTGGTTGGCGCGAATATTGCCATGGATATGGTGAAGATTTTAAGCCGTGAAGGAGTGAAAGATTTCCACTTCTATACGCTTAACCGTGCTGAAATGAGTTACGCGATTTGCCATACGCTGGGGGTTCGACCTGGTTTATAA", + "dna_sequence_length": 891, + "functions": [ + "5,10-methylenetetrahydrofolate reductase" + ], + "id": "CDS_3869", + "location": [ + [ + "NC_000913", + 4132616, + "+", + 891 + ] + ], + "md5": "6acc8f7bd7fd25bb42660ca1aa839048", + "parent_gene": "", + "protein_md5": "82423f46160b9ea3f63b799b4179fdac", + "protein_translation": "MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPGL", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012901" + ], + [ + "gene_synonym", + "ECK3934" + ], + [ + "gene_synonym", + "EcoGene:EG10511" + ], + [ + "gene_synonym", + "GI:16131780" + ], + [ + "gene_synonym", + "GeneID:948431" + ], + [ + "gene_synonym", + "JW3914" + ], + [ + "gene_synonym", + "NP_418377.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13029" + ], + [ + "gene_synonym", + "b3942" + ], + [ + "gene_synonym", + "katG" + ] + ], + "dna_sequence": "ATGAGCACGTCAGACGATATCCATAACACCACAGCCACTGGCAAATGCCCGTTCCATCAGGGCGGTCACGACCAGAGTGCGGGGGCGGGCACAACCACTCGCGACTGGTGGCCAAATCAACTTCGTGTTGACCTGTTAAACCAACATTCTAATCGTTCTAACCCACTGGGTGAGGACTTTGACTACCGCAAAGAATTCAGCAAATTAGATTACTACGGCCTGAAAAAAGATCTGAAAGCCCTGTTGACAGAATCTCAACCGTGGTGGCCAGCCGACTGGGGCAGTTACGCCGGTCTGTTTATTCGTATGGCCTGGCACGGCGCGGGGACTTACCGTTCAATCGATGGACGCGGTGGCGCGGGTCGTGGTCAGCAACGTTTTGCACCGCTGAACTCCTGGCCGGATAACGTAAGCCTCGATAAAGCGCGTCGCCTGTTGTGGCCAATCAAACAGAAATATGGTCAGAAAATCTCCTGGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGACGAAGAAACCGTGGCGCTGATTGCGGGTGGTCATACGCTGGGTAAAACCCACGGTGCCGGTCCGACATCAAATGTAGGTCCTGATCCAGAAGCTGCACCGATTGAAGAACAAGGTTTAGGTTGGGCGAGCACTTACGGCAGCGGCGTTGGCGCAGATGCCATTACCTCTGGTCTGGAAGTAGTCTGGACCCAGACGCCGACCCAGTGGAGCAACTATTTCTTCGAGAACCTGTTCAAGTATGAGTGGGTACAGACCCGCAGCCCGGCTGGCGCAATCCAGTTCGAAGCGGTAGACGCACCGGAAATTATCCCGGATCCGTTTGATCCGTCGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAA", + "dna_sequence_length": 2181, + "functions": [ + "catalase-peroxidase HPI, heme b-containing" + ], + "id": "CDS_3870", + "location": [ + [ + "NC_000913", + 4133835, + "+", + 2181 + ] + ], + "md5": "c121a03892a997bbdae55173d9adcf00", + "parent_gene": "", + "protein_md5": "ebd5357d3ce128574f709ea93cbd420c", + "protein_translation": "MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL", + "protein_translation_length": 726, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012906" + ], + [ + "gene_synonym", + "ECK3935" + ], + [ + "gene_synonym", + "EcoGene:EG11902" + ], + [ + "gene_synonym", + "GI:90111667" + ], + [ + "gene_synonym", + "GeneID:948445" + ], + [ + "gene_synonym", + "JW5557" + ], + [ + "gene_synonym", + "NP_418378.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABT8" + ], + [ + "gene_synonym", + "b3943" + ], + [ + "gene_synonym", + "yijE" + ] + ], + "dna_sequence": "ATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATGCGCCCGACACCGTTTAAATACACCTTAGCCATTGCCCTGTTACAAACCTGCGGGATGGTTGGTCTGGCGCAGTGGGCGTTGGTCAGCGGAGGTGCGGGGAAGGTGGCGATCCTGAGCTATACCATGCCGTTCTGGGTGGTGATTTTCGCCGCGTTGTTTCTCGGTGAACGCCTGCGACGTGGGCAATATTTCGCGATTCTGATTGCCGCTTTCGGCTTATTTTTGGTGTTGCAGCCGTGGCAACTCGATTTCTCTTCGATGAAAAGTGCCATGCTGGCAATCCTCTCCGGCGTCAGTTGGGGGGCGAGCGCGATTGTTGCTAAACGTCTGTATGCCCGTCATCCGCGCGTGGATTTATTGTCGTTAACATCCTGGCAGATGCTGTATGCGGCGCTGGTGATGAGTGTGGTCGCTTTACTGGTGCCGCAACGTGAAATTGACTGGCAGCCCACCGTGTTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACACTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGTCAGTGTAAAAAGGATCTGA", + "dna_sequence_length": 906, + "functions": [ + "EamA-like transporter family protein" + ], + "id": "CDS_3871", + "location": [ + [ + "NC_000913", + 4136108, + "+", + 906 + ] + ], + "md5": "fa40e60c97dcc23abda3b3429eb0c05a", + "parent_gene": "", + "protein_md5": "ee33b1f96fbb9fc32c120416e947a427", + "protein_translation": "MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKRI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012908" + ], + [ + "gene_synonym", + "ECK3936" + ], + [ + "gene_synonym", + "EcoGene:EG11903" + ], + [ + "gene_synonym", + "GI:16131782" + ], + [ + "gene_synonym", + "GeneID:948441" + ], + [ + "gene_synonym", + "JW3916" + ], + [ + "gene_synonym", + "NP_418379.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32668" + ], + [ + "gene_synonym", + "b3944" + ], + [ + "gene_synonym", + "yijF" + ] + ], + "dna_sequence": "ATGAAAGCTTCACTGGCGCTGCTCAGCCTGCTAACGGCATTTACCAGCCACTCCTTAAAATCTCCCGCCGTTCCACCAACCGTGGTACAAATCCAGGCCAATACCAACCTTGCCATCGCAGACGGTGCCAGACAGCAAATTGGCAGCACGCTATTTTACGATCCGGCGTATGTGCAGCTTACTTATCCTGGCGGTGATGTTCCGCAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGCGCATTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCTGAGTACCCGCAAAAATGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTAGCCGCCATGATAAAACACGCCCCACCAGCAAGAACCCCAGTGACTATCAAGCGGGCGATATTGTCTCCTGGCGACTGGATAACGGGCTGGCACATATTGGGGTGGTTTCAGATGGCTTCGCCCGCGACGGTACGCCGCTGGTGATACATAACATTGGCGCAGGCGCGCAGGAAGAAGATGTGCTGTTTAACTGGCGGATGGTGGGGCATTATCGTTATTTTGTTAAATAA", + "dna_sequence_length": 618, + "functions": [ + "DUF1287 family protein" + ], + "id": "CDS_3872", + "location": [ + [ + "NC_000913", + 4137657, + "-", + 618 + ] + ], + "md5": "e8c90d973ddc3ec03e828ada3e51ff5c", + "parent_gene": "", + "protein_md5": "6f01c581f6ee902a2694e4d2a8c90988", + "protein_translation": "MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012912" + ], + [ + "gene_synonym", + "ECK3937" + ], + [ + "gene_synonym", + "EcoGene:EG11904" + ], + [ + "gene_synonym", + "GI:90111668" + ], + [ + "gene_synonym", + "GeneID:948440" + ], + [ + "gene_synonym", + "JW5556" + ], + [ + "gene_synonym", + "NP_418380.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S5" + ], + [ + "gene_synonym", + "b3945" + ], + [ + "gene_synonym", + "gldA" + ] + ], + "dna_sequence": "ATGGACCGCATTATTCAATCACCGGGTAAATACATCCAGGGCGCTGATGTGATTAATCGTCTGGGCGAATACCTGAAGCCGCTGGCAGAACGCTGGTTAGTGGTGGGTGACAAATTTGTTTTAGGTTTTGCTCAATCCACTGTCGAGAAAAGCTTTAAAGATGCTGGACTGGTAGTAGAAATTGCGCCGTTTGGCGGTGAATGTTCGCAAAATGAGATCGACCGTCTGCGTGGCATCGCGGAGACTGCGCAGTGTGGCGCAATTCTCGGTATCGGTGGCGGAAAAACCCTCGATACTGCCAAAGCACTGGCACATTTCATGGGTGTTCCGGTAGCGATCGCACCGACTATCGCCTCTACCGATGCACCGTGCAGCGCATTGTCTGTTATCTACACCGATGAGGGTGAGTTTGACCGCTATCTGCTGTTGCCAAATAACCCGAATATGGTCATTGTCGACACCAAAATCGTCGCTGGCGCACCTGCACGTCTGTTAGCGGCGGGTATCGGCGATGCGCTGGCAACCTGGTTTGAAGCGCGTGCCTGCTCTCGTAGCGGCGCGACCACCATGGCGGGCGGCAAGTGCACCCAGGCTGCGCTGGCACTGGCTGAACTGTGCTACAACACCCTGCTGGAAGAAGGCGAAAAAGCGATGCTTGCTGCCGAACAGCATGTAGTGACTCCGGCGCTGGAGCGCGTGATTGAAGCGAACACCTATTTGAGCGGTGTTGGTTTTGAAAGTGGTGGTCTGGCTGCGGCGCACGCAGTGCATAACGGCCTGACCGCTATCCCGGACGCGCATCACTATTATCACGGTGAAAAAGTGGCATTCGGTACGCTGACGCAGCTGGTTCTGGAAAATGCGCCGGTGGAGGAAATCGAAACCGTAGCTGCCCTTAGCCATGCGGTAGGTTTGCCAATAACTCTCGCTCAACTGGATATTAAAGAAGATGTCCCGGCGAAAATGCGAATTGTGGCAGAAGCGGCATGTGCAGAAGGTGAAACCATTCACAACATGCCTGGCGGCGCGACGCCAGATCAGGTTTACGCCGCTCTGCTGGTAGCCGACCAGTACGGTCAGCGTTTCCTGCAAGAGTGGGAATAA", + "dna_sequence_length": 1104, + "functions": [ + "glycerol dehydrogenase, NAD+ dependent", + "1,2-propanediol:NAD+ oxidoreductase" + ], + "id": "CDS_3873", + "location": [ + [ + "NC_000913", + 4139035, + "-", + 1104 + ] + ], + "md5": "d808ce58b58269e944b113c121453d3b", + "parent_gene": "", + "protein_md5": "41885b05530325e8f45cb8ae67bb2a19", + "protein_translation": "MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE", + "protein_translation_length": 367, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012915" + ], + [ + "gene_synonym", + "ECK3938" + ], + [ + "gene_synonym", + "EcoGene:EG11905" + ], + [ + "gene_synonym", + "GI:16131784" + ], + [ + "gene_synonym", + "GeneID:948439" + ], + [ + "gene_synonym", + "JW3918" + ], + [ + "gene_synonym", + "NP_418381.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32669" + ], + [ + "gene_synonym", + "b3946" + ], + [ + "gene_synonym", + "fsaB" + ], + [ + "gene_synonym", + "talC" + ], + [ + "gene_synonym", + "yijG" + ] + ], + "dna_sequence": "ATGGAACTGTATCTGGACACCGCTAACGTCGCAGAAGTCGAACGTCTGGCACGCATATTCCCCATTGCCGGGGTGACAACTAACCCGAGCATTATCGCTGCCAGCAAGGAGTCCATATGGGAAGTGCTGCCGCGTCTGCAAAAAGCGATTGGTGATGAGGGCATTCTGTTTGCTCAGACCATGAGCCGCGACGCGCAGGGGATGGTGGAAGAAGCGAAGCGCCTGCGCGACGCTATTCCGGGTATTGTGGTGAAAATCCCGGTGACTTCCGAAGGTCTGGCAGCAATTAAAATACTGAAAAAAGAGGGTATTACTACACTTGGCACTGCTGTATATAGCGCCGCACAAGGGTTATTAGCCGCACTGGCAGGGGCAAAATACGTTGCTCCGTATGTTAACCGCGTAGATGCCCAGGGCGGAGACGGCATTCGTACGGTTCAGGAGCTGCAAACGCTGTTAGAAATGCACGCGCCAGAAAGCATGGTGCTGGCAGCCAGCTTTAAAACGCCGCGTCAGGCGCTGGACTGTTTACTGGCAGGATGTGAATCCATCACCCTGCCCTTAGATGTAGCGCAACAAATGCTCAACACCCCTGCGGTAGAGTCAGCTATAGAGAAGTTCGAACACGACTGGAATGCCGCATTTGGCACTACTCATCTCTAA", + "dna_sequence_length": 663, + "functions": [ + "fructose-6-phosphate aldolase 2" + ], + "id": "CDS_3874", + "location": [ + [ + "NC_000913", + 4139708, + "-", + 663 + ] + ], + "md5": "e37b82ccad182f45326d422587a51f6e", + "parent_gene": "", + "protein_md5": "bfabdd738cc4915d44ddb8814cf74056", + "protein_translation": "MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKEGITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPESMVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTTHL", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012920" + ], + [ + "gene_synonym", + "ECK3939" + ], + [ + "gene_synonym", + "EcoGene:EG11906" + ], + [ + "gene_synonym", + "GI:49176446" + ], + [ + "gene_synonym", + "GeneID:948437" + ], + [ + "gene_synonym", + "JW5555" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32670" + ], + [ + "gene_synonym", + "YP_026278.1" + ], + [ + "gene_synonym", + "b3947" + ], + [ + "gene_synonym", + "frwA" + ], + [ + "gene_synonym", + "ptsA" + ], + [ + "gene_synonym", + "yijH" + ] + ], + "dna_sequence": "ATGGCCCTGATTGTGGAATTTATTTGTGAGCTACCTAACGGCGTACATGCGCGTCCGGCAAGCCACGTTGAAACGCTGTGTAATACTTTTTCATCACAAATTGAGTGGCATAACCTGCGCACTGACCGCAAGGGCAACGCCAAAAGCGCCCTTGCGCTGATTGGCACCGATACGCTGGCGGGCGATAACTGCCAGTTACTGATTTCCGGGGCCGACGAACAGGAAGCGCACCAGCGTTTAAGCCAATGGCTGCGCGATGAATTCCCCCACTGCGATGCGCCGCTGGCGGAAGTTAAATCTGACGAACTGGAACCACTGCCGGTTTCACTGACCAATCTGAATCCGCAAATTATCCGCGCCCGCACCGTGTGCAGCGGTAGTGCAGGCGGCATTCTGACGCCGATCTCTTCTTTAGATCTCAATGCGCTGGGTAATCTTCCCGCAGCCAAAGGCGTTGACGCCGAGCAATCCGCACTGGAAAACGGCCTGACGCTGGTACTGAAAAACATTGAGTTTCGTCTGCTGGATAGCGACGGTGCTACCAGCGCGATTCTGGAAGCTCACCGATCCCTGGCTGGCGATACTTCCCTGCGCGAACATTTACTGGCAGGCGTCAGCGCCGGATTAAGCTGCGCCGAAGCAATTGTTGCCAGCGCGAATCACTTTTGCGAAGAGTTTTCCCGTTCCAGCAGCAGCTACCTGCAAGAACGTGCCCTGGACGTACGCGACGTCTGCTTCCAGTTACTCCAGCAAATCTACGGTGAGCAACGCTTCCCGGCACCGGGCAAACTGACGCAGCCCGCCATTTGTATGGCTGATGAACTGACCCCCAGCCAGTTCCTCGAACTGGATAAAAATCACCTCAAAGGATTGTTGCTCAAAAGCGGCGGCACCACCTCACATACGGTGATCCTTGCCCGTTCGTTCAACATTCCAACGCTGGTTGGTGTGGATATTGATGCCCTTACTCCGTGGCAGCAACAAACGATTTATATCGACGGCAACGCCGGGGCGATTGTGGTTGAGCCAGGGGAAGCCGTAGCTCGTTATTATCAGCAAGAAGCCCGCGTACAGGACGCCCTGCGTGAGCAACAGCGTGTCTGGCTGACCCAACAAGCCCGTACCGCTGACGGTATCCGCATTGAAATTGCCGCTAACATCGCTCACTCCGTGGAAGCGCAGGCCGCATTCGGCAATGGTGCGGAAGGCGTTGGTTTGTTCCGCACTGAAATGCTCTATATGGATCGCACCAGCGCACCGGGCGAAAGCGAGTTGTACAACATTTTTTGTCAGGCGCTGGAATCCGCCAACGGACGCAGCATTATTGTGCGCACTATGGACATTGGCGGCGACAAACCCGTTGATTATCTGAACATTCCCGCAGAGGCAAACCCGTTCCTCGGTTATCGCGCCGTGCGTATTTATGAAGAGTACGCGTCGTTGTTTACCACGCAGCTACGGTCGATCCTCCGCGCCTCCGCTCACGGCAGCCTGAAAATCATGATCCCGATGATCTCCTCAATGGAAGAGATCTTATGGGTGAAAGAAAAACTGGCGGAAGCCAAACAGCAACTACGTAACGAACACATTCCGTTTGATGAGAAAATCCAGCTCGGCATCATGCTGGAAGTGCCGTCGGTGATGTTCATCATCGATCAATGCTGCGAAGAGATTGATTTCTTTAGTATTGGTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATCGCGATAACGCTAAGGTTACTCGTCACTACAACAGCCTGAATCCGGCATTCTTGCGGGCGCTCGATTACGCCGTGCAAGCGGTGCATCGCCAGGGCAAATGGATTGGTCTGTGCGGTGAGCTGGGAGCGAAAGGTTCCGTGCTGCCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGGCGGCGAAAGCTCGGATGGCGCAACTTGATAGCCGTGAGTGCCGCAAGTTGCTCAACCAGGCAATGGCCTGCCGTACTTCGCTGGAAGTAGAACACCTGCTGGCGCAATTCCGCATGACCCAACAAGACGCACCGCTGGTCACCGCCGAGTGCATCACACTGGAAAGCGACTGGCGCAGCAAAGAAGAAGTGCTCAAAGGCATGACCGATAACCTGCTGCTGGCGGGCCGCTGCCGCTATCCGCGTAAACTGGAAGCCGACTTGTGGGCGCGCGAGGCCGTTTTCTCTACCGGTCTGGGCTTTAGTTTTGCCATTCCACACAGCAAATCAGAACACATTGAGCAATCCACCATCAGCGTGGCGCGTCTGCAAGCGCCGGTGCGCTGGGGCGATGATGAAGCGCAATTCATCATTATGTTAACCCTGAACAAACACGCTGCGGGCGATCAGCATATGCGCATTTTCTCGCGCCTCGCTCGCCGCATCATGCACGAAGAATTCCGTAACGCGCTGGTTAACGCCGCCTCTGCCGACGCTATCGCCAGCCTGCTGCAACATGAACTGGAACTGTAA", + "dna_sequence_length": 2502, + "functions": [ + "putative PTS enzyme: Hpr, enzyme I and II components" + ], + "id": "CDS_3875", + "location": [ + [ + "NC_000913", + 4142221, + "-", + 2502 + ] + ], + "md5": "ec8e4d0fcd7bfc110313e2facc3a13b4", + "parent_gene": "", + "protein_md5": "730816019363625b8f519d0774d7f3e3", + "protein_translation": "MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVASANHFCEEFSRSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQQQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKLLNQAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL", + "protein_translation_length": 833, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012928" + ], + [ + "gene_synonym", + "ECK3940" + ], + [ + "gene_synonym", + "EcoGene:EG11908" + ], + [ + "gene_synonym", + "GI:16131787" + ], + [ + "gene_synonym", + "GeneID:948448" + ], + [ + "gene_synonym", + "JW3921" + ], + [ + "gene_synonym", + "NP_418384.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32672" + ], + [ + "gene_synonym", + "b3949" + ], + [ + "gene_synonym", + "frwC" + ], + [ + "gene_synonym", + "yijJ" + ] + ], + "dna_sequence": "ATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGTTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGCGGGCTTGACGCTGATGGTGCCTTTCCTCGCAGCGTACATCGGTTATTCCATTGCAGAGCGTTCTGCGCTGGCTCCGTGCGCTATCGGTGCCTGGGTTGGTAACAGCTTTGGTGCGGGCTTCTTTGGTGCACTGATCGCCGGGATTATCGGCGGCATCGTGGTGCATTACCTGAAGAAAATTCCGGTGCATAAAGTTCTGCGCTCGGTGATGCCTATCTTCATTATTCCTATCGTCGGCACACTGATTACCGCAGGCATCATGATGTGGGGCTTGGGCGAGCCTGTAGGGGCGTTGACCAACAGCCTGACTCAGTGGCTTCAGGGGATGCAGCAGGGCAGCATTGTTATGCTGGCGGTGATCATGGGTCTGATGCTGGCGTTCGATATGGGCGGTCCGGTTAACAAAGTGGCCTATGCCTTCATGCTGATTTGCGTTGCTCAGGGTGTTTATACCGTGGTGGCCATCGCTGCCGTGGGTATTTGTATCCCGCCGCTGGGGATGGGGCTGGCGACGCTGATTGGTCGTAAAAATTTCTCCGCAGAAGAGCGCGAAACCGGCAAAGCGGCACTGGTGATGGGCTGTGTTGGCGTTACTGAAGGGGCGATTCCTTTCGCCGCTGCCGATCCGCTGCGTGTCATTCCTTCCATCATGGTCGGTTCAGTTTGTGGTGCAGTAACTGCGGCGCTGGTCGGTGCGCAGTGCTATGCAGGCTGGGGTGGTCTGATTGTGCTGCCGGTGGTTGAAGGCAAGCTGGGTTATATCGCAGCAGTGGCTGTCGGAGCAGTGGTGACGGCTGTTTGTGTGAACGTGCTGAAAAGTCTGGCGCGTAAAAATGGGTCTTCGACTGATGAAAAAGAAGACGACCTGGATTTGGATTTTGAAATTAATTAA", + "dna_sequence_length": 1080, + "functions": [ + "putative enzyme IIC component of PTS" + ], + "id": "CDS_3876", + "location": [ + [ + "NC_000913", + 4142530, + "+", + 1080 + ] + ], + "md5": "17c7a685c1ddc195bc2f32deac037984", + "parent_gene": "", + "protein_md5": "f86a7e80cdbf5542a6dee4efc45dc61d", + "protein_translation": "MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAGFFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGALTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLKSLARKNGSSTDEKEDDLDLDFEIN", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012930" + ], + [ + "gene_synonym", + "ECK3941" + ], + [ + "gene_synonym", + "EcoGene:EG11909" + ], + [ + "gene_synonym", + "GI:16131788" + ], + [ + "gene_synonym", + "GeneID:948447" + ], + [ + "gene_synonym", + "JW3922" + ], + [ + "gene_synonym", + "NP_418385.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69816" + ], + [ + "gene_synonym", + "b3950" + ], + [ + "gene_synonym", + "frwB" + ], + [ + "gene_synonym", + "yijK" + ] + ], + "dna_sequence": "ATGACGAAAATTATTGCAGTAACCGCATGTCCTTCAGGTGTTGCCCATACCTATATGGCAGCAGAGGCGCTGGAAAGTGCCGCGAAAGCGAAAGGCTGGGAAGTGAAAGTAGAAACCCAGGGGTCAATTGGTCTGGAAAATGAACTGACTGCGGAAGATGTGGCGAGCGCTGATATGGTGATTCTGACCAAAGATATCGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAA", + "dna_sequence_length": 321, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_3877", + "location": [ + [ + "NC_000913", + 4143624, + "+", + 321 + ] + ], + "md5": "e135f90076320ca49cdf10723d6da074", + "parent_gene": "", + "protein_md5": "41c745e1144737d3a54930399d749fd8", + "protein_translation": "MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012934" + ], + [ + "gene_synonym", + "ECK3942" + ], + [ + "gene_synonym", + "EcoGene:EG11910" + ], + [ + "gene_synonym", + "GI:16131789" + ], + [ + "gene_synonym", + "GeneID:948454" + ], + [ + "gene_synonym", + "JW3923" + ], + [ + "gene_synonym", + "NP_418386.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32674" + ], + [ + "gene_synonym", + "b3951" + ], + [ + "gene_synonym", + "pflD" + ], + [ + "gene_synonym", + "yijL" + ] + ], + "dna_sequence": "ATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCGGCAAACCGAAGGCGAACCGGTGATATTGCGCCGGGCGAAAGCAACAGCGTATATCCTTGAACATGTTGAAATTTCGATTCGTGATGAAGAACTGATTGCCGGTAACCGCACCGTAAAACCGCGCGCCGGGATTATGTCGCCGGAAATGGACCCTTACTGGCTGCTGAAAGAGCTGGATCAATTCCCGACGCGTCCGCAGGACCGCTTTGCTATCAGCGAAGAAGATAAACGTATCTACCGTGAAGAGTTGTTCCCGTACTGGGAAAAACGTTCGATGAAAGATTTCATCAACGGGCAGATGACAGATGAAGTAAAAGCCGCGACCAACACGCAGATTTTCAGCATCAACCAGACGGATAAAGGCCAGGGGCACATTATTATTGATTACCCACGCCTGTTGAATCACGGGCTGGGTGAGCTGGTGGCACAGATGCAGCAACATTGTCAGCAACAGCCGGAGAATCACTTTTATCAGGCCGCGTTGTTACTGCTGGAAGCCTCGCAGAAACACATTTTGCGTTACGCCGAACTGGCGGAAACGATGGCGGCAAACTGCACAGATGCCCAGCGTCGCGAAGAGCTGCTGACTATTGCAGAGATCTCCCGCCATAACGCGCAACATAAGCCGCAGACGTTCTGGCAGGCGTGCCAGTTATTCTGGTACATGAACATCATTCTGCAATACGAATCCAACGCCAGTTCGCTATCGTTGGGGCGCTTCGACCAGTATATGTTGCCGTTCTATCAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTGCAATTACCGCAACCGAACCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACATCGCGATGTTTAATCTGCTGAAAGTGATGGAAATCTGCCTGCATGAAAATGAAGGCAATGCTGCGCTGACTTATGAAGGTTTACTGGAGCAGATCCGCGCCAAGATCAGCCACTACATCACCCTGATGGTTGAGGGCAGCAATATTTGTGATATCGGCCATCGCGACTGGGCACCTGTACCGCTGCTCTCATCGTTTATCAGCGATTGTCTGGAAAAAGGCCGCGATATTACCGATGGCGGCGCGCGTTATAACTTCTCCGGCGTACAGGGGATCGGTATCGCCAACCTGAGCGATTCTCTCCATGCGTTGAAAGGGATGGTTTTTGAGCAACAGCGTTTAAGTTTTGACGAATTGCTGTCGGTATTAAAAGCCAACTTCGCAACGCCAGAAGGCGAAAAAGTCCGCGCTCGCTTAATTAACCGCTTCGAGAAATACGGTAACGATATCGACGAGGTGGATAACATCAGCGCCGAACTGTTGCGCCACTACTGCAAAGAAGTGGAAAAATACCAGAACCCGCGCGGCGGCTACTTCACGCCGGGATCGTATACCGTTTCTGCTCACGTCCCGTTGGGATCGGTGGTTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTACGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGAAGCGCAACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAA", + "dna_sequence_length": 2298, + "functions": [ + "putative glycine radical domain-containing pyruvate formate-lyase" + ], + "id": "CDS_3878", + "location": [ + [ + "NC_000913", + 4143995, + "+", + 2298 + ] + ], + "md5": "135d96ca7af319ac053ed31e6f3740d5", + "parent_gene": "", + "protein_md5": "3d42d701123a2473ba8f8fbf36f3afeb", + "protein_translation": "MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRAKATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATNTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTIAEISRHNAQHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLTQGEDAAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRFGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHENEGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL", + "protein_translation_length": 765, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012937" + ], + [ + "gene_synonym", + "ECK3943" + ], + [ + "gene_synonym", + "EcoGene:EG11911" + ], + [ + "gene_synonym", + "GI:49176447" + ], + [ + "gene_synonym", + "GeneID:948453" + ], + [ + "gene_synonym", + "JW3924" + ], + [ + "gene_synonym", + "NP_418387.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32675" + ], + [ + "gene_synonym", + "b3952" + ], + [ + "gene_synonym", + "pflC" + ], + [ + "gene_synonym", + "yijM" + ] + ], + "dna_sequence": "ATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGTGATGAAAGATGACATTTTCTTTCGCACGTCCGGCGGCGGCGTCACGCTTTCTGGCGGCGAAGTGTTAATGCAGGCGGAGTTTGCTACCCGTTTTTTACAGCGACTGCGGCTGTGGGGTGTGTCATGCGCCATTGAAACTGCCGGAGACGCACCAGCCAGCAAGCTATTACCGCTGGCGAAATTGTGCGATGAAGTGTTGTTCGATTTAAAAATTATGGACGCGACTCAGGCGCGGGATGTGGTGAAGATGAACCTGCCACGCGTGCTGGAGAATCTGCGTTTGCTGGTGAGTGAGGGCGTCAACGTGATCCCGCGTTTACCGCTGATCCCTGGTTTCACGCTCAGCCGGGAGAATATGCAGCAGGCGCTGGATGTACTGATCCCGCTGAATATCAGGCAGATCCATCTGTTACCGTTTCATCAGTACGGCGAACCGAAATACCGCCTGCTGGGGAAAACATGGTCGATGAAAGAGGTGCCTGCGCCGTCGTCAGCTGATGTGGCAACGATGCGCGAAATGGCAGAACGGGCCGGACTTCAGGTTACCGTGGGAGGTTAA", + "dna_sequence_length": 879, + "functions": [ + "putative [formate-C-acetyltransferase 2]-activating enzyme", + "pyruvate formate-lyase 1-activating enzyme" + ], + "id": "CDS_3879", + "location": [ + [ + "NC_000913", + 4146258, + "+", + 879 + ] + ], + "md5": "212d4afa2ff74a422740c697917871d3", + "parent_gene": "", + "protein_md5": "0b40b05e678b3c68befc1c668fde691b", + "protein_translation": "MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVATMREMAERAGLQVTVGG", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012941" + ], + [ + "gene_synonym", + "ECK3944" + ], + [ + "gene_synonym", + "EcoGene:EG11912" + ], + [ + "gene_synonym", + "GI:16131791" + ], + [ + "gene_synonym", + "GeneID:948452" + ], + [ + "gene_synonym", + "JW3925" + ], + [ + "gene_synonym", + "NP_418388.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32676" + ], + [ + "gene_synonym", + "b3953" + ], + [ + "gene_synonym", + "frwD" + ], + [ + "gene_synonym", + "yijN" + ] + ], + "dna_sequence": "ATGGCATACCTGGTGGCAGTAACCGCCTGCGTAAGCGGCGTGGCGCATACTTATATGGCGGCGGAACGGCTGGAAAAGTTGTGCCTGTTAGAGAAGTGGGGAGTCAGCATTGAAACTCAGGGCGCGCTGGGAACGGAGAATCGTTTAGCGGATGAGGATATCCGCCGGGCGGATGTTGCTCTGTTGATTACGGATATCGAGCTTGCCGGTGCCGAGCGATTTGAACATTGCCGCTATGTGCAATGCAGCATCTACGCATTCCTGCGTGAGCCGCAGCGGGTAATGAGCGCGGTGCGCAAAGTGCTTTCTGCGCCGCAGCAAACCCATCTTATTCTGGAGTAG", + "dna_sequence_length": 342, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_3880", + "location": [ + [ + "NC_000913", + 4147138, + "+", + 342 + ] + ], + "md5": "bb45b84d8e4bfe08f2581bd507a9dcfa", + "parent_gene": "", + "protein_md5": "fe5507fb382a0fab75c7421b41d25e0e", + "protein_translation": "MAYLVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012943" + ], + [ + "gene_synonym", + "ECK3945" + ], + [ + "gene_synonym", + "EcoGene:EG11913" + ], + [ + "gene_synonym", + "GI:16131792" + ], + [ + "gene_synonym", + "GeneID:948451" + ], + [ + "gene_synonym", + "JW3926" + ], + [ + "gene_synonym", + "NP_418389.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32677" + ], + [ + "gene_synonym", + "b3954" + ], + [ + "gene_synonym", + "yijO" + ] + ], + "dna_sequence": "ATGTATCACGACGTCAGCTATCTGCTCTCCCGCCTGATCAACGGCCCGCTGTCCCTGCGCCAGATTTACTTTGCCAGCAGTAACGGCCCGGTGCCCGATCTTGCGTATCAGGTCGATTTTCCACGGCTGGAAATTGTGCTGGAAGGTGAGTTTGTTGATACCGGCGCTGGAGCAACGTTAGTTCCCGGCGATGTGCTGTACGTTCCTGCTGGTGGCTGGAATTTTCCACAATGGCAAGCCCCCGCTACTACCTTTAGCGTGCTGTTTGGCAAACAGCAACTCGGCTTCAGCGTCGTGCAATGGGATGGCAAACAATATCAAAATCTGGCGAAGCAACACGTCGCCCGACGCGGCCCACGCATAGGTTCTTTTCTGCTACAAACGCTCAATGAAATGCAAATGCAGCCGCAGGAGCAGCAAACGGCAAGGCTTATCGTCGCCAGCCTGCTTAGCCACTGCCGCGATTTGCTTGGCAGCCAAATCCAGACCGCCTCACGCAGCCAGGCACTATTTGAAGCTATTCGCGATTATATCGACGAACGCTATGCCTCCGCGCTTACCCGCGAATCTGTTGCACAGGCGTTTTATATTTCGCCAAATTACCTCTCGCACCTGTTTCAAAAAACGGGGGCCATTGGTTTTAACGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGACCTGAAGGTAAAAGAAGTGGCGCACGCCTGCGGCTTTGTCGACAGCAACTACTTCTGCCGTCTGTTTCGTAAAAACACCGAACGCTCGCCGTCGGAATATCGCCGGCAGTACCACAGCCAACTGACAGAAAAACCGACTACTCCAGAATAA", + "dna_sequence_length": 852, + "functions": [ + "AraC family putative transcriptional activator" + ], + "id": "CDS_3881", + "location": [ + [ + "NC_000913", + 4148317, + "-", + 852 + ] + ], + "md5": "46cf5ca659f102e675ab4bb88607b513", + "parent_gene": "", + "protein_md5": "72dc4284e0ec27f04b1861d61bb5e339", + "protein_translation": "MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012947" + ], + [ + "gene_synonym", + "ECK3946" + ], + [ + "gene_synonym", + "EcoGene:EG11914" + ], + [ + "gene_synonym", + "GI:16131793" + ], + [ + "gene_synonym", + "GeneID:948458" + ], + [ + "gene_synonym", + "JW3927" + ], + [ + "gene_synonym", + "NP_418390.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CB39" + ], + [ + "gene_synonym", + "b3955" + ], + [ + "gene_synonym", + "cptA" + ], + [ + "gene_synonym", + "eptC" + ], + [ + "gene_synonym", + "yijP" + ] + ], + "dna_sequence": "ATGCATTCCACAGAAGTCCAGGCTAAACCTCTTTTTAGCTGGAAAGCCCTGGGTTGGGCACTGCTCTACTTTTGGTTTTTCTCTACTCTGCTACAGGCCATTATTTACATCAGTGGTTATAGTGGCACTAACGGCATTCGCGACTCGCTGTTATTCAGTTCGCTGTGGTTGATCCCGGTATTCCTCTTTCCGAAGCGGATTAAAATTATTGCCGCAGTAATCGGCGTGGTGCTATGGGCGGCCTCTCTGGCGGCGCTGTGCTACTACGTCATCTACGGTCAGGAGTTCTCGCAGAGCGTTCTGTTTGTGATGTTCGAAACCAACACCAACGAAGCCAGCGAGTATTTAAGCCAGTATTTCAGCCTGAAAATTGTGCTTATCGCGCTGGCCTATACGGCGGTGGCAGTTCTGCTGTGGACACGCCTGCGCCCGGTCTATATTCCAAAGCCGTGGCGTTATGTTGTCTCTTTTGCCCTGCTTTATGGCTTGATTCTGCATCCGATCGCCATGAATACGTTTATCAAAAACAAGCCGTTTGAGAAAACGTTGGATAACCTGGCCTCGCGTATGGAGCCTGCCGCACCGTGGCAATTCCTGACCGGCTATTATCAGTATCGTCAGCAACTAAACTCGCTAACAAAGTTACTGAATGAAAATAATGCCTTGCCGCCACTGGCTAATTTCAAAGATGAATCGGGTAACGAACCGCGCACTTTAGTGCTGGTGATTGGCGAGTCGACCCAGCGCGGACGCATGAGTCTGTACGGTTATCCGCGTGAAACCACGCCGGAGCTGGATGCGCTGCATAAAACCGATCCGAATCTGACCGTGTTTAATAACGTAGTTACGTCTCGTCCGTACACCATTGAAATCCTGCAACAGGCGCTGACCTTTGCCAATGAAAAGAACCCGGATCTGTATCTGACGCAGCCGTCGCTGATGAACATGATGAAACAGGCGGGTTATAAAACCTTCTGGATCACCAACCAGCAGACGATGACCGCCCGCAATACCATGCTGACGGTATTTTCGCGCCAGACCGACAAGCAGTACTACATGAACCAGCAACGTACGCAGAGTGCGCGTGAATACGACACCAACGTGCTGAAGCCGTTCCAGGAAGTGCTGAATGACCCTGCGCCGAAGAAACTGATCATTGTTCATCTGCTGGGTACGCATATCAAATACAAATACCGCTACCCGGAAAATCAGGGCAAGTTTGATGGCAATACCGATCATGTTCCGCCGGGATTAAACGCGGAAGAGCTGGAGTCATATAACGATTATGACAACGCTAACCTGTATAACGATCATGTGGTTGCCAGCCTGATTAAAGACTTTAAAGCAGCAAACCCGAACGGTTTCCTGGTTTATTTCTCTGACCACGGTGAAGAGGTTTACGACACGCCGCCGCACAAAACTCAGGGGCGTAATGAGGACAACCCGACGCGTCATATGTACACCATTCCGTTCCTGCTGTGGACGTCAGAAAAATGGCAAGCGACTCATCCCCGTGATTTCTCGCAGGATGTTGATCGTAAATACAGCCTGGCGGAACTGATCCACACCTGGTCAGATTTGGCGGGCTTATCTTACGACGGTTACGATCCAACCCGTTCAGTGGTGAATCCGCAGTTCAAAGAAACTACCCGCTGGATTGGTAACCCGTATAAGAAAAACGCACTGATCGATTACGACACACTGCCCTATGGCGATCAGGTGGGTAATCAGTAA", + "dna_sequence_length": 1734, + "functions": [ + "LPS heptose I phosphoethanolamine transferase" + ], + "id": "CDS_3882", + "location": [ + [ + "NC_000913", + 4150265, + "-", + 1734 + ] + ], + "md5": "2bde36d574f9c70f8f44266e70c1b520", + "parent_gene": "", + "protein_md5": "9b0240ae4e2576655c91f9f764c43be2", + "protein_translation": "MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQEVLNDPAPKKLIIVHLLGTHIKYKYRYPENQGKFDGNTDHVPPGLNAEELESYNDYDNANLYNDHVVASLIKDFKAANPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ", + "protein_translation_length": 577, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012950" + ], + [ + "gene_synonym", + "ECK3947" + ], + [ + "gene_synonym", + "EcoGene:EG10756" + ], + [ + "gene_synonym", + "GI:16131794" + ], + [ + "gene_synonym", + "GeneID:948457" + ], + [ + "gene_synonym", + "JW3928" + ], + [ + "gene_synonym", + "NP_418391.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00864" + ], + [ + "gene_synonym", + "asp" + ], + [ + "gene_synonym", + "b3956" + ], + [ + "gene_synonym", + "glu" + ], + [ + "gene_synonym", + "ppc" + ] + ], + "dna_sequence": "ATGAACGAACAATATTCCGCATTGCGTAGTAATGTCAGTATGCTCGGCAAAGTGCTGGGAGAAACCATCAAGGATGCGTTGGGAGAACACATTCTTGAACGCGTAGAAACTATCCGTAAGTTGTCGAAATCTTCACGCGCTGGCAATGATGCTAACCGCCAGGAGTTGCTCACCACCTTACAAAATTTGTCGAACGACGAGCTGCTGCCCGTTGCGCGTGCGTTTAGTCAGTTCCTGAACCTGGCCAACACCGCCGAGCAATACCACAGCATTTCGCCGAAAGGCGAAGCTGCCAGCAACCCGGAAGTGATCGCCCGCACCCTGCGTAAACTGAAAAACCAGCCGGAACTGAGCGAAGACACCATCAAAAAAGCAGTGGAATCGCTGTCGCTGGAACTGGTCCTCACGGCTCACCCAACCGAAATTACCCGTCGTACACTGATCCACAAAATGGTGGAAGTGAACGCCTGTTTAAAACAGCTCGATAACAAAGATATCGCTGACTACGAACACAACCAGCTGATGCGTCGCCTGCGCCAGTTGATCGCCCAGTCATGGCATACCGATGAAATCCGTAAGCTGCGTCCAAGCCCGGTAGATGAAGCCAAATGGGGCTTTGCCGTAGTGGAAAACAGCCTGTGGCAAGGCGTACCAAATTACCTGCGCGAACTGAACGAACAACTGGAAGAGAACCTCGGCTACAAACTGCCCGTCGAATTTGTTCCGGTCCGTTTTACTTCGTGGATGGGCGGCGACCGCGACGGCAACCCGAACGTCACTGCCGATATCACCCGCCACGTCCTGCTACTCAGCCGCTGGAAAGCCACCGATTTGTTCCTGAAAGATATTCAGGTGCTGGTTTCTGAACTGTCGATGGTTGAAGCGACCCCTGAACTGCTGGCGCTGGTTGGCGAAGAAGGTGCCGCAGAACCGTATCGCTATCTGATGAAAAACCTGCGTTCTCGCCTGATGGCGACACAGGCATGGCTGGAAGCGCGCCTGAAAGGCGAAGAACTGCCAAAACCAGAAGGCCTGCTGACACAAAACGAAGAACTGTGGGAACCGCTCTACGCTTGCTACCAGTCACTTCAGGCGTGTGGCATGGGTATTATCGCCAACGGCGATCTGCTCGACACCCTGCGCCGCGTGAAATGTTTCGGCGTACCGCTGGTCCGTATTGATATCCGTCAGGAGAGCACGCGTCATACCGAAGCGCTGGGCGAGCTGACCCGCTACCTCGGTATCGGCGACTACGAAAGCTGGTCAGAGGCCGACAAACAGGCGTTCCTGATCCGCGAACTGAACTCCAAACGTCCGCTTCTGCCGCGCAACTGGCAACCAAGCGCCGAAACGCGCGAAGTGCTCGATACCTGCCAGGTGATTGCCGAAGCACCGCAAGGCTCCATTGCCGCCTACGTGATCTCGATGGCGAAAACGCCGTCCGACGTACTGGCTGTCCACCTGCTGCTGAAAGAAGCGGGTATCGGGTTTGCGATGCCGGTTGCTCCGCTGTTTGAAACCCTCGATGATCTGAACAACGCCAACGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGGTTCCATTGGTCGCGGCGGCGCACCTGCTCATGCGGCGCTGCTGTCACAACCGCCAGGAAGCCTGAAAGGCGGCCTGCGCGTAACCGAACAGGGCGAGATGATCCGCTTTAAATATGGTCTGCCAGAAATCACCGTCAGCAGCCTGTCGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCACCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACCGCGGCTACGTACGTGAAAACAAAGATTTTGTGCCTTACTTCCGCTCCGCTACGCCGGAACAAGAACTGGGCAAACTGCCGTTGGGTTCACGTCCGGCGAAACGTCGCCCAACCGGCGGCGTCGAGTCACTACGCGCCATTCCGTGGATCTTCGCCTGGACGCAAAACCGTCTGATGCTCCCCGCCTGGCTGGGTGCAGGTACGGCGCTGCAAAAAGTGGTCGAAGACGGCAAACAGAGCGAGCTGGAGGCTATGTGCCGCGATTGGCCATTCTTCTCGACGCGTCTCGGCATGCTGGAGATGGTCTTCGCCAAAGCAGACCTGTGGCTGGCGGAATACTATGACCAACGCCTGGTAGACAAAGCACTGTGGCCGTTAGGTAAAGAGTTACGCAACCTGCAAGAAGAAGACATCAAAGTGGTGCTGGCGATTGCCAACGATTCCCATCTGATGGCCGATCTGCCGTGGATTGCAGAGTCTATTCAGCTACGGAATATTTACACCGACCCGCTGAACGTATTGCAGGCCGAGTTGCTGCACCGCTCCCGCCAGGCAGAAAAAGAAGGCCAGGAACCGGATCCTCGCGTCGAACAAGCGTTAATGGTCACTATTGCCGGGATTGCGGCAGGTATGCGTAATACCGGCTAA", + "dna_sequence_length": 2652, + "functions": [ + "phosphoenolpyruvate carboxylase" + ], + "id": "CDS_3883", + "location": [ + [ + "NC_000913", + 4153098, + "-", + 2652 + ] + ], + "md5": "6faade0604faa6472193d7cf8e89ec90", + "parent_gene": "", + "protein_md5": "a75fa3e22c2a164e8d5632867b4e2dd8", + "protein_translation": "MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARLKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKEGQEPDPRVEQALMVTIAGIAAGMRNTG", + "protein_translation_length": 883, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012955" + ], + [ + "gene_synonym", + "Arg4" + ], + [ + "gene_synonym", + "ECK3948" + ], + [ + "gene_synonym", + "EcoGene:EG11286" + ], + [ + "gene_synonym", + "GI:16131795" + ], + [ + "gene_synonym", + "GeneID:948456" + ], + [ + "gene_synonym", + "JW3929" + ], + [ + "gene_synonym", + "NP_418392.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23908" + ], + [ + "gene_synonym", + "argA" + ], + [ + "gene_synonym", + "argE" + ], + [ + "gene_synonym", + "b3957" + ] + ], + "dna_sequence": "ATGAAAAACAAATTACCGCCATTTATCGAGATTTACCGCGCTCTGATTGCCACACCTTCAATAAGCGCCACGGAAGAGGCACTCGATCAAAGCAATGCAGATTTAATCACTCTGCTGGCGGACTGGTTTAAAGATTTGGGCTTCAATGTGGAAGTGCAGCCTGTTCCAGGAACTCGCAACAAATTCAATATGCTGGCAAGTATCGGACAGGGGGCTGGCGGCTTGTTGCTGGCGGGGCATACCGATACGGTGCCATTTGATGACGGTCGCTGGACGCGCGATCCGTTTACACTGACGGAGCATGACGGCAAGCTTTACGGCTTAGGCACCGCCGACATGAAAGGCTTTTTTGCGTTTATCCTTGATGCGCTACGCGATGTCGACGTCACGAAACTGAAAAAACCGCTCTACATTCTGGCGACTGCTGATGAAGAAACCAGTATGGCCGGAGCGCGTTATTTTGCCGAAACTACCGCCCTGCGCCCGGATTGCGCCATCATTGGCGAACCGACGTCACTACAACCGGTACGCGCACATAAAGGTCATATCTCTAACGCCATCCGTATTCAGGGCCAGTCGGGGCACTCCAGCGATCCAGCACGCGGAGTTAACGCTATCGAACTAATGCACGACGCCATCGGGCATATTTTGCAATTGCGCGATAACCTGAAAGAACGTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCTTCTAACCGTATTTGCGCTTGCTGTGAGTTGCATATGGATATTCGTCCGCTGCCTGGCATGACACTCAATGAACTTAATGGTTTGCTCAACGATGCATTGGCTCCGGTGAGCGAACGCTGGCCGGGTCGTCTGACGGTCGACGAGCTGCATCCGCCGATCCCTGGCTATGAATGCCCACCGAATCATCAACTGGTTGAAGTGGTTGAGAAATTGCTCGGAGCAAAAACCGAAGTGGTGAACTACTGTACCGAAGCGCCGTTTATTCAAACGTTATGCCCGACGCTGGTGTTGGGGCCTGGCTCAATTAATCAGGCTCATCAACCTGATGAATATCTGGAAACACGGTTTATCAAGCCCACCCGCGAACTGATAACCCAGGTAATTCACCATTTTTGCTGGCATTAA", + "dna_sequence_length": 1152, + "functions": [ + "acetylornithine deacetylase" + ], + "id": "CDS_3884", + "location": [ + [ + "NC_000913", + 4154847, + "-", + 1152 + ] + ], + "md5": "10fb53ae3cfcc3050ca18ad91ca69eb8", + "parent_gene": "", + "protein_md5": "92a37e9240f942f7c12447ad1e114e82", + "protein_translation": "MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFCWH", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012964" + ], + [ + "gene_synonym", + "Arg2" + ], + [ + "gene_synonym", + "ECK3949" + ], + [ + "gene_synonym", + "EcoGene:EG10065" + ], + [ + "gene_synonym", + "GI:16131796" + ], + [ + "gene_synonym", + "GeneID:948455" + ], + [ + "gene_synonym", + "JW3930" + ], + [ + "gene_synonym", + "NP_418393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11446" + ], + [ + "gene_synonym", + "argC" + ], + [ + "gene_synonym", + "argH" + ], + [ + "gene_synonym", + "b3958" + ] + ], + "dna_sequence": "ATGTTGAATACGCTGATTGTGGGTGCCAGCGGCTACGCTGGCGCAGAGCTAGTGACCTATGTAAATCGCCATCCGCATATGAACATAACCGCTTTGACTGTTTCAGCGCAAAGCAATGATGCGGGAAAGTTAATCTCCGATTTGCATCCGCAGCTAAAAGGCATCGTTGATCTGCCGTTGCAGCCGATGTCGGATATCAGCGAGTTTAGCCCAGGGGTGGACGTAGTGTTTCTCGCCACCGCCCATGAAGTTAGCCACGATTTAGCGCCGCAGTTTCTTGAAGCGGGCTGCGTGGTGTTCGACCTTTCCGGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGTAAAGCGGCCATTTCAAACAGCTTTTGTGAAGTTAGCCTGCAACCGTATGGCGTCTTTACTCATCGCCATCAACCAGAGATCGCCACACACCTCGGTGCTGACGTTATCTTCACCCCACATCTGGGCAATTTCCCGCGCGGCATTCTCGAAACCATTACCTGCCGCCTGAAATCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAA", + "dna_sequence_length": 1005, + "functions": [ + "N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding" + ], + "id": "CDS_3885", + "location": [ + [ + "NC_000913", + 4155001, + "+", + 1005 + ] + ], + "md5": "2d021485d83dae845f435026b8ae2371", + "parent_gene": "", + "protein_md5": "b76faea9356a1aac5ab1bb5cb8a75ff7", + "protein_translation": "MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012967" + ], + [ + "gene_synonym", + "ECK3950" + ], + [ + "gene_synonym", + "EcoGene:EG10064" + ], + [ + "gene_synonym", + "GI:145698337" + ], + [ + "gene_synonym", + "GeneID:948464" + ], + [ + "gene_synonym", + "JW5553" + ], + [ + "gene_synonym", + "NP_418394.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6C8" + ], + [ + "gene_synonym", + "argB" + ], + [ + "gene_synonym", + "b3959" + ] + ], + "dna_sequence": "ATGATGAATCCATTAATTATCAAACTGGGCGGCGTACTGCTGGATAGTGAAGAGGCGCTGGAACGTCTGTTTAGCGCACTGGTGAATTATCGTGAGTCACATCAGCGTCCGCTGGTGATTGTGCACGGCGGCGGTTGCGTGGTGGATGAGCTGATGAAAGGGCTGAATCTGCCGGTGAAAAAGAAAAACGGCCTGCGGGTGACGCCTGCTGATCAGATAGACATTATCACCGGAGCACTGGCGGGAACGGCAAATAAAACCCTGTTGGCATGGGCGAAGAAACATCAGATTGCGGCCGTAGGTTTGTTTCTCGGTGACGGCGACAGCGTCAAAGTGACCCAGCTTGATGAAGAGTTAGGTCATGTTGGACTGGCGCAGCCAGGTTCGCCTAAGCTTATCAACTCCTTGCTGGAGAACGGTTATCTGCCGGTGGTCAGCTCCATTGGCGTAACAGACGAAGGGCAACTGATGAACGTCAATGCCGACCAGGCGGCAACGGCGCTGGCGGCAACGCTGGGCGCGGATCTGATTTTGCTCTCCGACGTCAGCGGCATTCTCGACGGCAAAGGGCAACGCATTGCCGAAATGACCGCCGCGAAAGCAGAACAACTGATTGAGCAGGGCATTATTACTGACGGCATGATAGTGAAAGTGAACGCGGCGCTGGATGCGGCCCGCACGCTGGGCCGTCCGGTAGATATCGCCTCCTGGCGTCATGCGGAGCAGCTTCCGGCACTGTTTAACGGTATGCCGATGGGTACGCGGATTTTAGCTTAA", + "dna_sequence_length": 777, + "functions": [ + "acetylglutamate kinase" + ], + "id": "CDS_3886", + "location": [ + [ + "NC_000913", + 4156013, + "+", + 777 + ] + ], + "md5": "83a7e7b75d6926d297e3b99e063579d6", + "parent_gene": "", + "protein_md5": "c286455726fee736ab7098a9f1cab5aa", + "protein_translation": "MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012969" + ], + [ + "gene_synonym", + "ECK3951" + ], + [ + "gene_synonym", + "EcoGene:EG11223" + ], + [ + "gene_synonym", + "GI:16131798" + ], + [ + "gene_synonym", + "GeneID:948463" + ], + [ + "gene_synonym", + "JW3932" + ], + [ + "gene_synonym", + "NP_418395.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11447" + ], + [ + "gene_synonym", + "argH" + ], + [ + "gene_synonym", + "b3960" + ] + ], + "dna_sequence": "ATGGCACTTTGGGGCGGGCGTTTTACCCAGGCAGCAGATCAACGGTTCAAACAATTCAACGACTCACTGCGCTTTGATTACCGTCTGGCGGAGCAGGATATTGTTGGCTCTGTGGCCTGGTCCAAAGCCCTGGTCACGGTAGGCGTGTTAACCGCAGAAGAGCAGGCGCAACTGGAAGAGGCGCTGAACGTGTTGCTGGAAGATGTTCGCGCCAGGCCACAACAAATCCTTGAAAGCGACGCCGAAGATATCCATAGCTGGGTGGAAGGCAAACTGATCGACAAAGTGGGCCAGTTAGGCAAAAAGCTGCATACCGGGCGTAGCCGTAATGATCAGGTAGCGACTGACCTGAAACTGTGGTGCAAAGATACCGTTAGCGAGTTACTGACGGCTAACCGGCAGCTGCAATCGGCGCTGGTGGAAACCGCACAAAACAATCAGGACGCGGTAATGCCAGGTTACACTCACCTGCAACGCGCCCAGCCGGTGACGTTCGCGCACTGGTGCCTGGCCTATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGACCATGTGTTGGAACTGCTTTCTGCTGCCGCTATCGGCATGGTGCATCTGTCGCGTTTTGCTGAAGATCTGATTTTCTTTAACACCGGCGAAGCGGGGTTTGTGGAGCTTTCTGACCGCGTGACTTCCGGTTCATCATTAATGCCGCAGAAGAAAAACCCGGATGCGCTGGAGCTGATTCGCGGTAAATGCGGCCGGGTGCAGGGGGCGTTAACCGGCATGATGATGACGCTGAAAGGTTTGCCGCTGGCTTACAACAAAGATATGCAGGAAGACAAAGAAGGTCTGTTCGACGCGCTCGATACCTGGCTGGACTGCCTGCATATGGCGGCGCTGGTGCTGGACGGCATTCAGGTGAAACGTCCACGTTGCCAGGAAGCGGCTCAGCAGGGTTACGCCAACGCCACCGAACTGGCGGATTATCTGGTGGCGAAAGGCGTACCGTTCCGCGAGGCGCACCATATTGTTGGTGAAGCGGTGGTGGAAGCCATTCGTCAGGGCAAACCGCTGGAAGATCTGCCGCTCAGTGAGTTGCAGAAATTCAGTCAGGTGATTGACGAAGATGTCTATCCGATTCTGTCGCTGCAATCGTGCCTCGACAAGCGTGCGGCAAAAGGCGGCGTCTCACCGCAGCAGGTGGCGCAGGCGATTGCTTTTGCGCAGGCTCGGTTAGGGTAA", + "dna_sequence_length": 1374, + "functions": [ + "argininosuccinate lyase" + ], + "id": "CDS_3887", + "location": [ + [ + "NC_000913", + 4156850, + "+", + 1374 + ] + ], + "md5": "95f848a225524f958378a6cc9856cf33", + "parent_gene": "", + "protein_md5": "7442579a7f9797c55678402dbb898539", + "protein_translation": "MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012973" + ], + [ + "gene_synonym", + "ECK3953" + ], + [ + "gene_synonym", + "EcoGene:EG10681" + ], + [ + "gene_synonym", + "GI:16131799" + ], + [ + "gene_synonym", + "GeneID:948462" + ], + [ + "gene_synonym", + "JW3933" + ], + [ + "gene_synonym", + "NP_418396.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACQ4" + ], + [ + "gene_synonym", + "b3961" + ], + [ + "gene_synonym", + "momR" + ], + [ + "gene_synonym", + "mor" + ], + [ + "gene_synonym", + "oxyR" + ] + ], + "dna_sequence": "ATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTGGCGCAACTGGACAGCGGCAAACTCGATTGCGTGATCCTCGCGCTGGTGAAAGAGAGCGAAGCATTCATTGAAGTGCCGTTGTTTGATGAGCCAATGTTGCTGGCTATCTATGAAGATCACCCGTGGGCGAACCGCGAATGCGTACCGATGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCTGCGCAGCCGCTATGAGCAGCTGGCAGAGGCCATCCGCGCAAGAATGGATGGCCATTTCGATAAAGTTTTAAAACAGGCGGTTTAA", + "dna_sequence_length": 918, + "functions": [ + "oxidative and nitrosative stress transcriptional regulator" + ], + "id": "CDS_3888", + "location": [ + [ + "NC_000913", + 4158490, + "+", + 918 + ] + ], + "md5": "6d88aaf9634c171d7d9e840892cde87f", + "parent_gene": "", + "protein_md5": "01f7ef453121c0bb818ead6a5da9a2b6", + "protein_translation": "MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKVLKQAV", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012975" + ], + [ + "gene_synonym", + "ECK3954" + ], + [ + "gene_synonym", + "EcoGene:EG11428" + ], + [ + "gene_synonym", + "GI:90111670" + ], + [ + "gene_synonym", + "GeneID:948461" + ], + [ + "gene_synonym", + "JW5551" + ], + [ + "gene_synonym", + "NP_418397.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27306" + ], + [ + "gene_synonym", + "b3962" + ], + [ + "gene_synonym", + "sth" + ], + [ + "gene_synonym", + "sthA" + ], + [ + "gene_synonym", + "udhA" + ] + ], + "dna_sequence": "ATGCCACATTCCTACGATTACGATGCCATAGTAATAGGTTCCGGCCCCGGCGGCGAAGGCGCTGCAATGGGCCTGGTTAAGCAAGGTGCGCGCGTCGCAGTTATCGAGCGTTATCAAAATGTTGGCGGCGGTTGCACCCACTGGGGCACCATCCCGTCGAAAGCTCTCCGTCACGCCGTCAGCCGCATTATAGAATTCAATCAAAACCCACTTTACAGCGACCATTCCCGACTGCTCCGCTCTTCTTTTGCCGATATCCTTAACCATGCCGATAACGTGATTAATCAACAAACGCGCATGCGTCAGGGATTTTACGAACGTAATCACTGTGAAATATTGCAGGGAAACGCTCGCTTTGTTGACGAGCATACGTTGGCGCTGGATTGCCCGGACGGCAGCGTTGAAACACTAACCGCTGAAAAATTTGTTATTGCCTGCGGCTCTCGTCCATATCATCCAACAGATGTTGATTTCACCCATCCACGCATTTACGACAGCGACTCAATTCTCAGCATGCACCACGAACCGCGCCATGTACTTATCTATGGTGCTGGAGTGATCGGCTGTGAATATGCGTCGATCTTCCGCGGTATGGATGTAAAAGTGGATCTGATCAACACCCGCGATCGCCTGCTGGCATTTCTCGATCAAGAGATGTCAGATTCTCTCTCCTATCACTTCTGGAACAGTGGCGTAGTGATTCGTCACAACGAAGAGTACGAGAAGATCGAAGGCTGTGACGATGGTGTGATCATGCATCTGAAGTCGGGTAAAAAACTGAAAGCTGACTGCCTGCTCTATGCCAACGGTCGCACCGGTAATACCGATTCGCTGGCGTTACAGAACATTGGGCTAGAAACTGACAGCCGCGGACAGCTGAAGGTCAACAGCATGTATCAGACCGCACAGCCACACGTTTACGCGGTGGGCGACGTGATTGGTTATCCGAGCCTGGCGTCGGCGGCCTATGACCAGGGGCGCATTGCCGCGCAGGCGCTGGTAAAAGGCGAAGCCACCGCACATCTGATTGAAGATATCCCTACCGGTATTTACACCATCCCGGAAATCAGCTCTGTGGGCAAAACCGAACAGCAGCTGACCGCAATGAAAGTGCCATATGAAGTGGGCCGCGCCCAGTTTAAACATCTGGCACGCGCACAAATCGTCGGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGTATTCACTGCTTTGGCGAGCGCGCTGCCGAAATTATTCATATCGGTCAGGCGATTATGGAACAGAAAGGTGGCGGCAACACTATTGAGTACTTCGTCAACACCACCTTTAACTACCCGACGATGGCGGAAGCCTATCGGGTAGCTGCGTTAAACGGTTTAAACCGCCTGTTTTAA", + "dna_sequence_length": 1401, + "functions": [ + "pyridine nucleotide transhydrogenase, soluble" + ], + "id": "CDS_3889", + "location": [ + [ + "NC_000913", + 4160790, + "-", + 1401 + ] + ], + "md5": "062604c19d5160122a86bae3f35a8d3a", + "parent_gene": "", + "protein_md5": "b41e72a4c433caa23623d4acc83b24c6", + "protein_translation": "MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012979" + ], + [ + "gene_synonym", + "ECK3955" + ], + [ + "gene_synonym", + "EcoGene:EG11394" + ], + [ + "gene_synonym", + "GI:145698338" + ], + [ + "gene_synonym", + "GeneID:948460" + ], + [ + "gene_synonym", + "JW3935" + ], + [ + "gene_synonym", + "NP_418398.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU5" + ], + [ + "gene_synonym", + "b3963" + ], + [ + "gene_synonym", + "fabR" + ], + [ + "gene_synonym", + "yijC" + ] + ], + "dna_sequence": "ATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTCAGTGCGGGTGCCGAGGCGTTGGACGTCGGCGTCGAACAACGTCGGCAATTAGAAGAGCGACTGGTACTGCAACTGCGAATGATTTCGAAAGGGGCTTATTACTGGTATCGCCGTGAACAAGAGAAAACCGCAATTATTCCGGGAAATGTGAAGGACGAGTAA", + "dna_sequence_length": 648, + "functions": [ + "transcriptional repressor of fabA and fabB" + ], + "id": "CDS_3890", + "location": [ + [ + "NC_000913", + 4161124, + "+", + 648 + ] + ], + "md5": "c4374daf3af2f9cfce7362f14453c7f5", + "parent_gene": "", + "protein_md5": "9c884acd7dfaecc39e28e2c4116eac1d", + "protein_translation": "MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012981" + ], + [ + "gene_synonym", + "ECK3956" + ], + [ + "gene_synonym", + "EcoGene:EG11395" + ], + [ + "gene_synonym", + "GI:16131802" + ], + [ + "gene_synonym", + "GeneID:948459" + ], + [ + "gene_synonym", + "JW3936" + ], + [ + "gene_synonym", + "NP_418399.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF40" + ], + [ + "gene_synonym", + "b3964" + ], + [ + "gene_synonym", + "yijD" + ] + ], + "dna_sequence": "ATGAAACAAGCAAATCAAGATAGAGGTACGCTGCTGCTGGCGTTAGTTGCTGGCTTATCGATTAATGGTACTTTCGCAGCGCTGTTTAGCTCCATTGTGCCATTTTCTGTATTCCCGATTATTTCCCTGGTGCTGACGGTTTACTGCCTGCATCAACGTTATCTTAATCGCACTATGCCGGTAGGCTTGCCGGGTCTGGCAGCTGCCTGTTTTATTCTCGGCGTACTGCTGTACAGCACGGTAGTTCGTGCGGAATATCCGGATATCGGCTCTAACTTCTTCCCGGCAGTACTCTCCGTCATTATGGTGTTCTGGATTGGCGCGAAGATGCGTAACCGTAAGCAGGAAGTTGCTGAGTAA", + "dna_sequence_length": 360, + "functions": [ + "DUF1422 family inner membrane protein" + ], + "id": "CDS_3891", + "location": [ + [ + "NC_000913", + 4161771, + "+", + 360 + ] + ], + "md5": "34dbf983352888e1154eb4dcba8e2f27", + "parent_gene": "", + "protein_md5": "2f6db36b7105d20f193c42038f4a3b07", + "protein_translation": "MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012983" + ], + [ + "gene_synonym", + "ECK3957" + ], + [ + "gene_synonym", + "EcoGene:EG11022" + ], + [ + "gene_synonym", + "GI:16131803" + ], + [ + "gene_synonym", + "GeneID:947143" + ], + [ + "gene_synonym", + "JW3937" + ], + [ + "gene_synonym", + "NP_418400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23003" + ], + [ + "gene_synonym", + "b3965" + ], + [ + "gene_synonym", + "rumT" + ], + [ + "gene_synonym", + "trmA" + ] + ], + "dna_sequence": "ATGACCCCCGAACACCTTCCAACAGAACAGTATGAAGCGCAGTTAGCCGAAAAAGTGGTACGTTTGCAAAGTATGATGGCACCGTTTTCTGACCTGGTTCCGGAAGTGTTTCGCTCGCCGGTCAGTCATTACCGGATGCGCGCGGAGTTCCGCATCTGGCACGATGGCGATGACCTGTATCACATCATTTTCGATCAACAAACCAAAAGCCGCATCCGCGTGGATAGCTTCCCCGCCGCCAGTGAACTTATCAACCAGTTGATGACGGCGATGATTGCGGGTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGCGATGCACTGCGCGCGCAGAATCTGAATGTGCATCTGATTGGTCGGGCAACGAAAACCAAAATCGAGCTGGATCAGGATTACATCGATGAACGTCTGCCGGTCGCAGGGAAAGAGATGATCTACCGTCAGGTAGAAAACAGCTTTACCCAGCCGAACGCGGCGATGAATATTCAGATGCTGGAATGGGCGCTGGACGTAACCAAAGGCTCAAAAGGCGATTTACTGGAGCTGTACTGCGGCAACGGTAACTTTTCATTAGCGCTGGCGCGTAATTTTGATCGGGTATTAGCCACCGAAATCGCTAAGCCGTCGGTTGCTGCTGCGCAATACAACATCGCAGCTAACCATATTGATAACGTACAAATTATTCGTATGGCGGCAGAAGAATTTACTCAGGCGATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTTTGTACATCTCCTGTAACCCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGCTCTGTTTGATCAGTTCCCCTACACGCACCATATGGAGTGCGGCGTATTACTGACCGCGAAGTAA", + "dna_sequence_length": 1101, + "functions": [ + "tRNA m(5)U54 methyltransferase, SAM-dependent", + "tmRNA m(5)U341 methyltransferase" + ], + "id": "CDS_3892", + "location": [ + [ + "NC_000913", + 4163270, + "-", + 1101 + ] + ], + "md5": "42db6c32569c4cfed3cb31df7eb7fcc2", + "parent_gene": "", + "protein_md5": "4e283760d8ea01febd28a43dd22d064c", + "protein_translation": "MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLLTAK", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012987" + ], + [ + "gene_synonym", + "ECK3958" + ], + [ + "gene_synonym", + "EcoGene:EG10126" + ], + [ + "gene_synonym", + "GI:16131804" + ], + [ + "gene_synonym", + "GeneID:948468" + ], + [ + "gene_synonym", + "JW3938" + ], + [ + "gene_synonym", + "NP_418401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06129" + ], + [ + "gene_synonym", + "b3966" + ], + [ + "gene_synonym", + "bfe" + ], + [ + "gene_synonym", + "btuB" + ], + [ + "gene_synonym", + "cer" + ], + [ + "gene_synonym", + "dcrC" + ] + ], + "dna_sequence": "ATGATTAAAAAAGCTTCGCTGCTGACGGCGTGTTCCGTCACGGCATTTTCCGCTTGGGCACAGGATACCAGCCCGGATACTCTCGTCGTTACTGCTAACCGTTTTGAACAGCCGCGCAGCACTGTGCTTGCACCAACCACCGTTGTGACCCGTCAGGATATCGACCGCTGGCAGTCGACCTCGGTCAATGATGTGCTGCGCCGTCTTCCGGGCGTCGATATCACCCAAAACGGCGGTTCAGGTCAGCTCTCATCTATTTTTATTCGCGGTACAAATGCCAGTCATGTGTTGGTGTTAATTGATGGCGTACGCCTGAATCTGGCGGGGGTGAGTGGTTCTGCCGACCTTAGCCAGTTCCCTATTGCGCTTGTCCAGCGTGTTGAATATATCCGTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGCCCATACTCATGGTTATGATGTTGTTGCCTATGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCGTTTGAAGGCTTAACCGCTGGGGTGAACTGGCGTATTTCCGGATATCGTAACGATGTCAGTGACTTGATCGATTATGATGATCACACCCTGAAATATTACAACGAAGGGAAAGCGCGGATTAAGGGCGTCGAGGCGACCGCCAATTTTGATACCGGACCACTGACGCATACTGTGAGTTATGATTATGTCGATGCGCGCAATGCGATTACCGACACGCCGTTGTTACGCCGTGCTAAACAGCAGGTGAAATACCAGCTCGACTGGCAGTTGTATGACTTCGACTGGGGTATTACTTATCAGTATTTAGGCACTCGCTATGATAAGGATTACTCATCTTATCCTTATCAAACCGTTAAAATGGGCGGTGTGAGCTTGTGGGATCTTGCGGTTGCGTATCCGGTCACCTCTCACCTGACAGTTCGTGGTAAAATAGCCAACCTGTTCGACAAAGATTATGAGACAGTCTATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGA", + "dna_sequence_length": 1845, + "functions": [ + "vitamin B12/cobalamin outer membrane transporter" + ], + "id": "CDS_3893", + "location": [ + [ + "NC_000913", + 4163639, + "+", + 1845 + ] + ], + "md5": "9c458b1838a14a636f75658c017ae371", + "parent_gene": "", + "protein_md5": "bff682d892bd20567c21bf5a41df7872", + "protein_translation": "MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQLGDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRGYGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPHYGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQLYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKARIKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITYQYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF", + "protein_translation_length": 614, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012989" + ], + [ + "gene_synonym", + "ECK3959" + ], + [ + "gene_synonym", + "EcoGene:EG11204" + ], + [ + "gene_synonym", + "GI:90111671" + ], + [ + "gene_synonym", + "GeneID:948467" + ], + [ + "gene_synonym", + "JW5550" + ], + [ + "gene_synonym", + "NP_418402.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22634" + ], + [ + "gene_synonym", + "b3967" + ], + [ + "gene_synonym", + "dga" + ], + [ + "gene_synonym", + "glr" + ], + [ + "gene_synonym", + "murI" + ], + [ + "gene_synonym", + "yijA" + ] + ], + "dna_sequence": "ATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGAACCACGTCCCACCGTGCTGGTGTTTGACTCCGGCGTCGGTGGGTTGTCGGTCTATGACGAGATCCGGCATCTCTTACCGGATCTCCATTACATTTATGCTTTCGATAACGTCGCTTTCCCGTATGGCGAAAAAAGCGAAGCGTTTATTGTTGAGCGAGTGGTGGCAATTGTCACCGCGGTGCAAGAACGTTATCCCCTTGCGCTGGCTGTGGTCGCTTGCAACACTGCCAGTACCGTTTCACTTCCTGCATTACGCGAAAAGTTCGACTTCCCGGTTGTTGGTGTCGTGCCGGCGATTAAACCTGCTGCACGTCTGACGGCAAATGGCATTGTCGGATTACTGGCAACCCGCGGAACAGTTAAACGTTCTTATACTCATGAGCTGATCGCGCGTTTCGCTAATGAATGCCAGATAGAAATGCTGGGCTCGGCAGAGATGGTTGAGTTGGCTGAAGCGAAGCTACATGGCGAAGATGTTTCTCTGGATGCACTAAAACGTATCCTACGCCCGTGGTTAAGAATGAAAGAGCCGCCAGATACCGTTGTATTGGGTTGCACCCATTTCCCTCTACTACAAGAAGAACTGTTACAAGTGCTGCCAGAGGGAACCCGGCTGGTGGATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGA", + "dna_sequence_length": 858, + "functions": [ + "glutamate racemase" + ], + "id": "CDS_3894", + "location": [ + [ + "NC_000913", + 4165428, + "+", + 858 + ] + ], + "md5": "4608be4221a1508de52f850f9857b32a", + "parent_gene": "", + "protein_md5": "491082b44bf46a95668a6816713fc15d", + "protein_translation": "MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPGAEQLLPVLQRYGFETLEKLAVLG", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012999" + ], + [ + "gene_synonym", + "ECK3964" + ], + [ + "gene_synonym", + "EcoGene:EG11205" + ], + [ + "gene_synonym", + "GI:16131806" + ], + [ + "gene_synonym", + "GeneID:948470" + ], + [ + "gene_synonym", + "JW3940" + ], + [ + "gene_synonym", + "NP_418403.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08373" + ], + [ + "gene_synonym", + "b3972" + ], + [ + "gene_synonym", + "murB" + ], + [ + "gene_synonym", + "yijB" + ] + ], + "dna_sequence": "ATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGCAACCGCAGAAGGACAACCCGTTCTTATTCTGGGTGAAGGAAGTAATGTACTTTTTCTGGAGGACTATCGCGGCACGGTGATCATCAACCGGATCAAAGGTATCGAAATTCATGATGAACCTGATGCGTGGTATTTACATGTAGGAGCCGGAGAAAACTGGCATCGTCTGGTAAAATACACTTTGCAGGAAGGTATGCCTGGTCTGGAAAATCTGGCATTAATTCCTGGTTGTGTCGGCTCATCACCTATCCAGAATATTGGTGCTTATGGCGTAGAATTACAGCGAGTTTGCGCTTATGTTGATTCTGTTGAACTGGCGACAGGCAAGCAAGTGCGCTTAACTGCCAAAGAGTGCCGTTTTGGCTATCGCGACAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAAAAGTGAATGGCAATGCCGGTAGTTTCTTCAAAAACCCTGTTGTATCTGCCGAAACGGCTAAAGCATTACTGTCACAATTTCCAACAGCACCAAATTACCCCCAGGCGGATGGTTCAGTAAAACTGGCAGCAGGTTGGCTTATCGATCAGTGCCAGCTAAAAGGGATGCAAATAGGTGGGGCTGCGGTGCACCGTCAACAGGCGTTAGTTCTCATTAATGAAGACAATGCAAAAAGCGAAGATGTTGTACAGCTGGCGCATCATGTAAGACAGAAAGTTGGTGAAAAATTTAATGTCTGGCTTGAGCCTGAAGTCCGCTTTATTGGTGCATCAGGTGAAGTGAGCGCAGTGGAGACAATTTCATGA", + "dna_sequence_length": 1029, + "functions": [ + "UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding" + ], + "id": "CDS_3895", + "location": [ + [ + "NC_000913", + 4172057, + "+", + 1029 + ] + ], + "md5": "97b00e2c7f004429a5fb6d8c1e6d2c76", + "parent_gene": "", + "protein_md5": "9d72d77a5c91701cbc7667b1c914be4f", + "protein_translation": "MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS", + "protein_translation_length": 342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013001" + ], + [ + "gene_synonym", + "ECK3965" + ], + [ + "gene_synonym", + "EcoGene:EG10123" + ], + [ + "gene_synonym", + "GI:16131807" + ], + [ + "gene_synonym", + "GeneID:948469" + ], + [ + "gene_synonym", + "JW3941" + ], + [ + "gene_synonym", + "NP_418404.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06709" + ], + [ + "gene_synonym", + "b3973" + ], + [ + "gene_synonym", + "bioR" + ], + [ + "gene_synonym", + "birA" + ], + [ + "gene_synonym", + "dhbB" + ] + ], + "dna_sequence": "ATGAAGGATAACACCGTGCCACTGAAATTGATTGCCCTGTTAGCGAACGGTGAATTTCACTCTGGCGAGCAGTTGGGTGAAACGCTGGGAATGAGCCGGGCGGCTATTAATAAACACATTCAGACACTGCGTGACTGGGGCGTTGATGTCTTTACCGTTCCGGGTAAAGGATACAGCCTGCCTGAGCCTATCCAGTTACTTAATGCTAAACAGATATTGGGTCAGCTGGATGGCGGTAGTGTAGCCGTGCTGCCAGTGATTGACTCCACGAATCAGTACCTTCTTGATCGTATCGGAGAGCTTAAATCGGGCGATGCTTGCATTGCAGAATACCAGCAGGCTGGCCGTGGTCGCCGGGGTCGGAAATGGTTTTCGCCTTTTGGCGCAAACTTATATTTGTCGATGTTCTGGCGTCTGGAACAAGGCCCGGCGGCGGCGATTGGTTTAAGTCTGGTTATCGGTATCGTGATGGCGGAAGTATTACGCAAGCTGGGTGCAGATAAAGTTCGTGTTAAATGGCCTAATGACCTCTATCTGCAGGATCGCAAGCTGGCAGGCATTCTGGTGGAGCTGACTGGCAAAACTGGCGATGCGGCGCAAATAGTCATTGGAGCCGGGATCAACATGGCAATGCGCCGTGTTGAAGAGAGTGTCGTTAATCAGGGGTGGATCACGCTGCAGGAAGCGGGGATCAATCTCGATCGTAATACGTTGGCGGCCATGCTAATACGTGAATTACGTGCTGCGTTGGAACTCTTCGAACAAGAAGGATTGGCACCTTATCTGTCGCGCTGGGAAAAGCTGGATAATTTTATTAATCGCCCAGTGAAACTTATCATTGGTGATAAAGAAATATTTGGCATTTCACGCGGAATAGACAAACAGGGGGCTTTATTACTTGAGCAGGATGGAATAATAAAACCCTGGATGGGCGGTGAAATATCCCTGCGTAGTGCAGAAAAATAA", + "dna_sequence_length": 966, + "functions": [ + "bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding" + ], + "id": "CDS_3896", + "location": [ + [ + "NC_000913", + 4173082, + "+", + 966 + ] + ], + "md5": "01fac2525497318259e7c0e40da1c399", + "parent_gene": "", + "protein_md5": "6377acf0c94f2e3fccfb248537a1ca53", + "protein_translation": "MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013003" + ], + [ + "gene_synonym", + "ECK3966" + ], + [ + "gene_synonym", + "EcoGene:EG10922" + ], + [ + "gene_synonym", + "GI:16131808" + ], + [ + "gene_synonym", + "GeneID:948479" + ], + [ + "gene_synonym", + "JW3942" + ], + [ + "gene_synonym", + "NP_418405.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6I3" + ], + [ + "gene_synonym", + "b3974" + ], + [ + "gene_synonym", + "coaA" + ], + [ + "gene_synonym", + "panK" + ], + [ + "gene_synonym", + "rts" + ], + [ + "gene_synonym", + "ts-9" + ] + ], + "dna_sequence": "ATGAGTATAAAAGAGCAAACGTTAATGACGCCTTACCTACAGTTTGACCGCAACCAGTGGGCAGCTCTGCGTGATTCCGTACCTATGACGTTATCGGAAGATGAGATCGCCCGTCTCAAAGGTATTAATGAAGATCTCTCGTTAGAAGAAGTTGCCGAGATCTATTTACCTTTGTCACGTTTGCTGAACTTCTATATAAGCTCGAATCTGCGCCGTCAGGCAGTTCTGGAACAGTTTCTTGGTACCAACGGGCAACGCATTCCTTACATTATCAGTATTGCTGGCAGTGTCGCGGTGGGGAAAAGTACAACCGCCCGTGTATTGCAGGCGCTATTAAGCCGTTGGCCGGAACATCGTCGTGTTGAACTGATCACTACAGATGGCTTCCTTCACCCTAATCAGGTTCTGAAAGAACGTGGTCTGATGAAGAAGAAAGGCTTCCCGGAATCGTATGATATGCATCGCCTGGTGAAGTTTGTTTCCGATCTCAAATCCGGCGTGCCAAACGTTACAGCACCTGTTTACTCACATCTTATTTATGATGTGATCCCGGATGGAGATAAAACGGTTGTTCAGCCTGATATTTTAATTCTTGAAGGGTTAAATGTCTTACAGAGCGGGATGGATTATCCACACGATCCACATCATGTATTTGTTTCTGATTTTGTCGATTTTTCGATATATGTTGATGCACCGGAAGACTTACTTCAGACATGGTATATCAACCGTTTTCTGAAATTCCGCGAAGGGGCTTTTACCGACCCGGATTCCTATTTTCATAACTACGCGAAATTAACTAAAGAAGAAGCGATTAAGACTGCCATGACATTGTGGAAAGAGATCAACTGGCTGAACTTAAAGCAAAATATTCTACCTACTCGTGAGCGCGCCAGTTTAATCCTGACGAAAAGTGCTAATCATGCGGTAGAAGAGGTCAGACTACGCAAATAA", + "dna_sequence_length": 951, + "functions": [ + "pantothenate kinase" + ], + "id": "CDS_3897", + "location": [ + [ + "NC_000913", + 4175026, + "-", + 951 + ] + ], + "md5": "e79f87656fe2434ecabb36f98d5fcda0", + "parent_gene": "", + "protein_md5": "fdb0d509fcabda888f4573fac395de0b", + "protein_translation": "MSIKEQTLMTPYLQFDRNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013020" + ], + [ + "gene_synonym", + "ECK3971" + ], + [ + "gene_synonym", + "EcoGene:EG11037" + ], + [ + "gene_synonym", + "GI:16131810" + ], + [ + "gene_synonym", + "GeneID:948482" + ], + [ + "gene_synonym", + "JW3943" + ], + [ + "gene_synonym", + "NP_418407.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE48" + ], + [ + "gene_synonym", + "b3980" + ], + [ + "gene_synonym", + "kirT" + ], + [ + "gene_synonym", + "pulT" + ], + [ + "gene_synonym", + "tufB" + ] + ], + "dna_sequence": "ATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACATGGTTGATGACGAAGAGCTGCTGGAACTGGTTGAAATGGAAGTTCGTGAACTTCTGTCTCAGTACGACTTCCCGGGCGACGACACTCCGATCGTTCGTGGTTCTGCTCTGAAAGCGCTGGAAGGCGACGCAGAGTGGGAAGCGAAAATCCTGGAACTGGCTGGCTTCCTGGATTCTTACATTCCGGAACCAGAGCGTGCGATTGACAAGCCGTTCCTGCTGCCGATCGAAGACGTATTCTCCATCTCCGGTCGTGGTACCGTTGTTACCGGTCGTGTAGAACGCGGTATCATCAAAGTTGGTGAAGAAGTTGAAATCGTTGGTATCAAAGAGACTCAGAAGTCTACCTGTACTGGCGTTGAAATGTTCCGCAAACTGCTGGACGAAGGCCGTGCTGGTGAGAACGTAGGTGTTCTGCTGCGTGGTATCAAACGTGAAGAAATCGAACGTGGTCAGGTACTGGCTAAGCCGGGCACCATCAAGCCGCACACCAAGTTCGAATCTGAAGTGTACATTCTGTCCAAAGATGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGATCGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAA", + "dna_sequence_length": 1185, + "functions": [ + "translation elongation factor EF-Tu 2" + ], + "id": "CDS_3898", + "location": [ + [ + "NC_000913", + 4175944, + "+", + 1185 + ] + ], + "md5": "6f584a5e7c9e0c7aea768d9d07433d9f", + "parent_gene": "", + "protein_md5": "b837a74346c7ec8a55808938a4589cfa", + "protein_translation": "MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013023" + ], + [ + "gene_synonym", + "ECK3972" + ], + [ + "gene_synonym", + "EcoGene:EG10939" + ], + [ + "gene_synonym", + "GI:16131811" + ], + [ + "gene_synonym", + "GeneID:948486" + ], + [ + "gene_synonym", + "JW3944" + ], + [ + "gene_synonym", + "NP_418408.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG96" + ], + [ + "gene_synonym", + "b3981" + ], + [ + "gene_synonym", + "mbrC" + ], + [ + "gene_synonym", + "prlG" + ], + [ + "gene_synonym", + "secE" + ] + ], + "dna_sequence": "ATGAGTGCGAATACCGAAGCTCAAGGAAGCGGGCGCGGCCTGGAAGCGATGAAGTGGGTCGTTGTGGTGGCATTGCTCCTGGTGGCGATTGTCGGCAACTATCTTTATCGCGACATTATGCTGCCGCTGCGTGCGCTGGCCGTAGTAATTCTGATTGCTGCAGCGGGTGGTGTCGCGCTGTTAACGACAAAAGGTAAAGCTACCGTTGCTTTTGCCCGTGAAGCGCGTACCGAAGTCCGTAAGGTCATTTGGCCGACTCGCCAGGAAACATTGCACACCACGCTGATTGTGGCTGCGGTTACCGCAGTAATGTCACTGATCCTGTGGGGACTGGATGGTATTCTGGTTCGCCTGGTATCCTTTATCACTGGCCTGAGGTTCTGA", + "dna_sequence_length": 384, + "functions": [ + "preprotein translocase membrane subunit" + ], + "id": "CDS_3899", + "location": [ + [ + "NC_000913", + 4177358, + "+", + 384 + ] + ], + "md5": "75e182f703103920b9e8808918cc3d15", + "parent_gene": "", + "protein_md5": "d7fac8c3b32b51f5695354313167117d", + "protein_translation": "MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013026" + ], + [ + "gene_synonym", + "ECK3973" + ], + [ + "gene_synonym", + "EcoGene:EG10667" + ], + [ + "gene_synonym", + "GI:16131812" + ], + [ + "gene_synonym", + "GeneID:948485" + ], + [ + "gene_synonym", + "JW3945" + ], + [ + "gene_synonym", + "NP_418409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG0" + ], + [ + "gene_synonym", + "b3982" + ], + [ + "gene_synonym", + "nusG" + ] + ], + "dna_sequence": "ATGTCTGAAGCTCCTAAAAAGCGCTGGTACGTCGTTCAGGCGTTTTCCGGTTTTGAAGGCCGCGTAGCAACGTCGCTGCGTGAGCATATCAAATTACACAACATGGAAGATTTGTTTGGTGAAGTCATGGTACCAACCGAAGAAGTGGTTGAAATCCGTGGCGGTCAGCGTCGCAAAAGCGAACGTAAATTCTTCCCTGGCTACGTCCTCGTTCAGATGGTGATGAACGACGCGAGCTGGCACCTGGTGCGCAGCGTACCGCGTGTGATGGGCTTCATCGGCGGTACTTCCGATCGTCCTGCGCCAATCAGCGATAAAGAAGTCGATGCGATTATGAACCGCCTGCAGCAGGTTGGTGATAAGCCGCGTCCGAAAACGCTGTTTGAACCGGGTGAAATGGTCCGTGTTAATGATGGTCCGTTCGCTGACTTCAACGGTGTTGTTGAAGAAGTGGATTACGAGAAATCTCGTCTGAAAGTGTCTGTTTCTATCTTCGGTCGTGCGACCCCGGTAGAGCTGGACTTCAGCCAGGTTGAAAAAGCCTAA", + "dna_sequence_length": 546, + "functions": [ + "transcription termination factor" + ], + "id": "CDS_3900", + "location": [ + [ + "NC_000913", + 4177743, + "+", + 546 + ] + ], + "md5": "86ac44df8e726384f9c78f11c7645df0", + "parent_gene": "", + "protein_md5": "b5d2ac662405ed8122bc520d5bb79ca1", + "protein_translation": "MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013029" + ], + [ + "gene_synonym", + "ECK3974" + ], + [ + "gene_synonym", + "EcoGene:EG10872" + ], + [ + "gene_synonym", + "GI:16131813" + ], + [ + "gene_synonym", + "GeneID:948484" + ], + [ + "gene_synonym", + "JW3946" + ], + [ + "gene_synonym", + "NP_418410.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7J7" + ], + [ + "gene_synonym", + "b3983" + ], + [ + "gene_synonym", + "relC" + ], + [ + "gene_synonym", + "rplK" + ] + ], + "dna_sequence": "ATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTGAAAAAAGCGGCTGGTATCAAGTCTGGTTCCGGTAAGCCGAACAAAGACAAAGTGGGTAAAATTTCCCGCGCTCAGCTGCAGGAAATCGCGCAGACCAAAGCTGCCGACATGACTGGTGCCGACATTGAAGCGATGACTCGCTCCATCGAAGGTACTGCACGTTCCATGGGCCTGGTAGTGGAGGACTAA", + "dna_sequence_length": 429, + "functions": [ + "50S ribosomal subunit protein L11" + ], + "id": "CDS_3901", + "location": [ + [ + "NC_000913", + 4178447, + "+", + 429 + ] + ], + "md5": "15581a6c10bff04a6539463ae60ceb3e", + "parent_gene": "", + "protein_md5": "8db149aa24ca533fb58ad37447a8e174", + "protein_translation": "MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED", + "protein_translation_length": 142, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013031" + ], + [ + "gene_synonym", + "ECK3975" + ], + [ + "gene_synonym", + "EcoGene:EG10864" + ], + [ + "gene_synonym", + "GI:16131814" + ], + [ + "gene_synonym", + "GeneID:948483" + ], + [ + "gene_synonym", + "JW3947" + ], + [ + "gene_synonym", + "NP_418411.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7L0" + ], + [ + "gene_synonym", + "b3984" + ], + [ + "gene_synonym", + "rplA" + ], + [ + "gene_synonym", + "rpy" + ] + ], + "dna_sequence": "ATGGCTAAACTGACCAAGCGCATGCGTGTTATCCGCGAGAAAGTTGATGCAACCAAACAGTACGACATCAACGAAGCTATCGCACTGCTGAAAGAGCTGGCGACTGCTAAATTCGTAGAAAGCGTGGACGTAGCTGTTAACCTCGGCATCGACGCTCGTAAATCTGACCAGAACGTACGTGGTGCAACTGTACTGCCGCACGGTACTGGCCGTTCCGTTCGCGTAGCCGTATTTACCCAAGGTGCAAACGCTGAAGCTGCTAAAGCTGCAGGCGCAGAACTGGTAGGTATGGAAGATCTGGCTGACCAGATCAAGAAAGGCGAAATGAACTTTGACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACGCTGACAAACTGAAAGAAAACCTGGAAGCTCTGCTGGTTGCGCTGAAAAAAGCAAAACCGACTCAGGCGAAAGGCGTGTACATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAA", + "dna_sequence_length": 705, + "functions": [ + "50S ribosomal subunit protein L1" + ], + "id": "CDS_3902", + "location": [ + [ + "NC_000913", + 4178879, + "+", + 705 + ] + ], + "md5": "c545f482ac23d93858d52f14dd1375f6", + "parent_gene": "", + "protein_md5": "aa221aaeffc9e9506e602943921ef46a", + "protein_translation": "MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013035" + ], + [ + "gene_synonym", + "ECK3976" + ], + [ + "gene_synonym", + "EcoGene:EG10871" + ], + [ + "gene_synonym", + "GI:16131815" + ], + [ + "gene_synonym", + "GeneID:948490" + ], + [ + "gene_synonym", + "JW3948" + ], + [ + "gene_synonym", + "NP_418412.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7J3" + ], + [ + "gene_synonym", + "b3985" + ], + [ + "gene_synonym", + "rplJ" + ] + ], + "dna_sequence": "ATGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACATGCGTGTTGTTCGTAACACCCTGCTGCGCCGTGCTGTTGAAGGTACTCCGTTCGAGTGCCTGAAAGACGCGTTTGTTGGTCCGACCCTGATTGCATACTCTATGGAACACCCGGGCGCTGCTGCTCGTCTGTTCAAAGAGTTCGCGAAAGCGAATGCAAAATTTGAGGTCAAAGCCGCTGCCTTTGAAGGTGAGCTGATCCCGGCGTCTCAGATCGACCGCCTGGCAACTCTGCCGACCTACGAAGAAGCAATTGCACGCCTGATGGCAACCATGAAAGAAGCTTCGGCTGGCAAACTGGTTCGTACTCTGGCTGCTGTACGCGATGCGAAAGAAGCTGCTTAA", + "dna_sequence_length": 498, + "functions": [ + "50S ribosomal subunit protein L10" + ], + "id": "CDS_3903", + "location": [ + [ + "NC_000913", + 4179996, + "+", + 498 + ] + ], + "md5": "f76d571657762e0dd2c384f27d676fa8", + "parent_gene": "", + "protein_md5": "bb3e0d7cf8c73e995b255695bc36b470", + "protein_translation": "MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013038" + ], + [ + "gene_synonym", + "ECK3977" + ], + [ + "gene_synonym", + "EcoGene:EG10873" + ], + [ + "gene_synonym", + "GI:16131816" + ], + [ + "gene_synonym", + "GeneID:948489" + ], + [ + "gene_synonym", + "JW3949" + ], + [ + "gene_synonym", + "NP_418413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7K2" + ], + [ + "gene_synonym", + "b3986" + ], + [ + "gene_synonym", + "rplL" + ] + ], + "dna_sequence": "ATGTCTATCACTAAAGATCAAATCATTGAAGCAGTTGCAGCTATGTCTGTAATGGACGTTGTAGAACTGATCTCTGCAATGGAAGAAAAATTCGGTGTTTCCGCTGCTGCTGCTGTAGCTGTAGCTGCTGGCCCGGTTGAAGCTGCTGAAGAAAAAACTGAATTCGACGTAATTCTGAAAGCTGCTGGCGCTAACAAAGTTGCTGTTATCAAAGCAGTACGTGGCGCAACTGGCCTGGGTCTGAAAGAAGCTAAAGACCTGGTAGAATCTGCACCGGCTGCTCTGAAAGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAA", + "dna_sequence_length": 366, + "functions": [ + "50S ribosomal subunit protein L7/L12" + ], + "id": "CDS_3904", + "location": [ + [ + "NC_000913", + 4180560, + "+", + 366 + ] + ], + "md5": "51cced02f30a52449d87e07825bef08a", + "parent_gene": "", + "protein_md5": "951984a24105ceca351709a149fd5e19", + "protein_translation": "MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013041" + ], + [ + "gene_synonym", + "ECK3978" + ], + [ + "gene_synonym", + "EcoGene:EG10894" + ], + [ + "gene_synonym", + "GI:16131817" + ], + [ + "gene_synonym", + "GeneID:948488" + ], + [ + "gene_synonym", + "JW3950" + ], + [ + "gene_synonym", + "NP_418414.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8V2" + ], + [ + "gene_synonym", + "b3987" + ], + [ + "gene_synonym", + "ftsR" + ], + [ + "gene_synonym", + "groN" + ], + [ + "gene_synonym", + "mbrD?" + ], + [ + "gene_synonym", + "nitB" + ], + [ + "gene_synonym", + "rif" + ], + [ + "gene_synonym", + "ron" + ], + [ + "gene_synonym", + "rpoB" + ], + [ + "gene_synonym", + "sdgB" + ], + [ + "gene_synonym", + "stl" + ], + [ + "gene_synonym", + "stv" + ], + [ + "gene_synonym", + "tabD" + ], + [ + "gene_synonym", + "tabG" + ] + ], + "dna_sequence": "ATGGTTTACTCCTATACCGAGAAAAAACGTATTCGTAAGGATTTTGGTAAACGTCCACAAGTTCTGGATGTACCTTATCTCCTTTCTATCCAGCTTGACTCGTTTCAGAAATTTATCGAGCAAGATCCTGAAGGGCAGTATGGTCTGGAAGCTGCTTTCCGTTCCGTATTCCCGATTCAGAGCTACAGCGGTAATTCCGAGCTGCAATACGTCAGCTACCGCCTTGGCGAACCGGTGTTTGACGTCCAGGAATGTCAAATCCGTGGCGTGACCTATTCCGCACCGCTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGTACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAAAGGCCGCCGTATCACTGCGCGCCACATTCGCCAGCTGGAAAAAGACGACGTCAAACTGATCGAAGTCCCGGTTGAGTACATCGCAGGTAAAGTGGTTGCTAAAGACTATATTGATGAGTCTACCGGCGAGCTGATCTGCGCAGCGAACATGGAGCTGAGCCTGGATCTGCTGGCTAAGCTGAGCCAGTCTGGTCACAAGCGTATCGAAACGCTGTTCACCAACGATCTGGATCACGGCCCATATATCTCTGAAACCTTACGTGTCGACCCAACTAACGACCGTCTGAGCGCACTGGTAGAAATCTACCGCATGATGCGCCCTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTCCGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCCTGGTACGTGTAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTGGGCGATCTGGATACCCTGATGCCACAGGATATGATCAACGCCAAGCCGATTTCCGCAGCAGTGAAAGAGTTCTTCGGTTCCAGCCAGCTGTCTCAGTTTATGGACCAGAACAACCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAACTACGTTATCGCCCAGGCGAACTCCAACTTGGATGAAGAAGGCCACTTCGTAGAAGACCTGGTAACTTGCCGTAGCAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAGGTTGACTACATGGACGTATCCACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCGTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCAGAAGAAAAACTGCTGCGTGCGATCTTCGGTGAGAAAGCCTCTGACGTTAAAGACTCTTCTCTGCGCGTACCAAACGGTGTATCCGGTACGGTTATCGACGTTCAGGTCTTTACTCGCGATGGCGTAGAAAAAGACAAACGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACAAACTGCCGCGCGATCGCTGGCTGGAGCTGGGCCTGACAGACGAAGAGAAACAAAATCAGCTGGAACAGCTGGCTGAGCAGTATGACGAACTGAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCCAATCGCAACGCCGGTGTTCGACGGTGCGAAAGAAGCAGAAATTAAAGAGCTGCTGAAACTTGGCGACCTGCCGACTTCCGGTCAGATCCGCCTGTACGATGGTCGCACTGGTGAACAGTTCGAGCGTCCGGTAACCGTTGGTTACATGTACATGCTGAAACTGAACCACCTGGTCGACGACAAGATGCACGCGCGTTCCACCGGTTCTTACAGCCTGGTTACTCAGCAGCCGCTGGGTGGTAAGGCACAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCAGCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAA", + "dna_sequence_length": 4029, + "functions": [ + "RNA polymerase, beta subunit" + ], + "id": "CDS_3905", + "location": [ + [ + "NC_000913", + 4181245, + "+", + 4029 + ] + ], + "md5": "07be65b41d32156e9aa0110548b73ac0", + "parent_gene": "", + "protein_md5": "5a6db54270d33f1e4bfa723559a235e2", + "protein_translation": "MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE", + "protein_translation_length": 1342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013043" + ], + [ + "gene_synonym", + "ECK3979" + ], + [ + "gene_synonym", + "EcoGene:EG10895" + ], + [ + "gene_synonym", + "GI:16131818" + ], + [ + "gene_synonym", + "GeneID:948487" + ], + [ + "gene_synonym", + "JW3951" + ], + [ + "gene_synonym", + "NP_418415.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8T7" + ], + [ + "gene_synonym", + "b3988" + ], + [ + "gene_synonym", + "rpoC" + ], + [ + "gene_synonym", + "tabB" + ] + ], + "dna_sequence": "GTGAAAGATTTATTAAAGTTTCTGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGTGGCGTCATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTACGCCGTGAGCGTATGGGCCACATCGAACTGGCTTCCCCGACTGCGCACATCTGGTTCCTGAAATCGCTGCCGTCCCGTATCGGTCTGCTGCTCGATATGCCGCTGCGCGATATCGAACGCGTACTGTACTTTGAATCCTATGTGGTTATCGAAGGCGGTATGACCAACCTGGAACGTCAGCAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGATAACGGTCGTCGCGGTCGTGCGATCACCGGTTCTAACAAGCGTCCTCTGAAATCTTTGGCCGACATGATCAAAGGTAAACAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATTAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAACACCCGGTACTGCTGAACCGTGCACCGACTCTGCACCGTCTGGGTATCCAGGCATTTGAACCGGTACTGATCGAAGGTAAAGCTATCCAGCTGCACCCGCTGGTTTGTGCGGCATATAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTGGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTGTCCCCGGCGAACGGCGAACCAATCATCGTTCCGTCTCAGGACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCAGAACGTCTGTATCGCTCTGGTCTGGCTTCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGACTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAATCTCCAAAATGCTGAACACCTGCTACCGCATTCTCGGTCTGAAACCGACCGTTATTTTTGCGGACCAGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGACATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCATGATGACTCCGGTTATCGAGGGTGGTGACGTTAAAGAGCCGCTGCGCGATCGCGTACTGGGTCGTGTAACTGCTGAAGACGTTCTGAAGCCGGGTACTGCTGATATCCTCGTTCCGCGCAACACGCTGCTGCACGAACAGTGGTGTGACCTGCTGGAAGAGAACTCTGTCGACGCGGTTAAAGTACGTTCTGTTGTATCTTGTGACACCGACTTTGGTGTATGTGCGCACTGCTACGGTCGTGACCTGGCGCGTGGCCACATCATCAACAAGGGTGAAGCAATCGGTGTTATCGCGGCACAGTCCATCGGTGAACCGGGTACACAGCTGACCATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCGTAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGGCATCGTTCCAGGAGACCACTCGCGTGCTGACCGAAGCAGCCGTTGCGGGCAAACGCGACGAACTGCGCGGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAA", + "dna_sequence_length": 4224, + "functions": [ + "RNA polymerase, beta prime subunit" + ], + "id": "CDS_3906", + "location": [ + [ + "NC_000913", + 4185350, + "+", + 4224 + ] + ], + "md5": "fed09cc73800e64aacfd785f67792b56", + "parent_gene": "", + "protein_md5": "a30532fe425b21bf247cfa9b90939faa", + "protein_translation": "MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPAAPQVTAEDASASLAELLNAGLGGSDNE", + "protein_translation_length": 1407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013046" + ], + [ + "gene_synonym", + "ECK3980" + ], + [ + "gene_synonym", + "EcoGene:EG11429" + ], + [ + "gene_synonym", + "GI:16131819" + ], + [ + "gene_synonym", + "GeneID:948495" + ], + [ + "gene_synonym", + "JW3952" + ], + [ + "gene_synonym", + "NP_418416.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27375" + ], + [ + "gene_synonym", + "b3989" + ], + [ + "gene_synonym", + "htrC" + ], + [ + "gene_synonym", + "yjaZ" + ] + ], + "dna_sequence": "ATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGCACACACTTAAAAAGAACTATTTTGGCGCTGCCAGAAAGCAACGTTATTCATGCCGGGTATGGTAGCTATGCCGTGATTGAGGTGGACTTAGACGGAGGAGATAAGGCATTTTACTTTGTTGCGTTCAGGGCTTTCAGGGAAAAGAAAAAACTCCGTTTGCATGTAACTAGCGCTTATCCCATTTCTGAAAAACAGAAAGGTAAATCAGTGAAATTTTTCACCATTGCCTACAACTTATTGAGAAATAAGCAGCTTCCTCAGCCCTCAAAATAA", + "dna_sequence_length": 540, + "functions": [ + "stationary phase growth adaptation protein" + ], + "id": "CDS_3907", + "location": [ + [ + "NC_000913", + 4189786, + "+", + 540 + ] + ], + "md5": "cc64ac764afa7417488d52a889fe8a27", + "parent_gene": "", + "protein_md5": "8e4067112e91e9268e4e913e45dd9981", + "protein_translation": "MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013048" + ], + [ + "gene_synonym", + "ECK3981" + ], + [ + "gene_synonym", + "EcoGene:EG11590" + ], + [ + "gene_synonym", + "GI:16131820" + ], + [ + "gene_synonym", + "GeneID:948494" + ], + [ + "gene_synonym", + "JW3953" + ], + [ + "gene_synonym", + "NP_418417.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30140" + ], + [ + "gene_synonym", + "b3990" + ], + [ + "gene_synonym", + "thiB" + ], + [ + "gene_synonym", + "thiH" + ] + ], + "dna_sequence": "ATGAAAACCTTCAGCGATCGCTGGCGACAACTGGACTGGGACGACATCCGCCTGCGTATCAACGGCAAAACGGCTGCTGACGTAGAGCGGGCGCTAAATGCCTCGCAACTCACCCGCGACGACATGATGGCGCTGTTATCGCCTGCCGCCAGTGGCTATCTGGAACAACTGGCCCAACGGGCGCAGCGTCTGACCCGTCAGCGATTTGGCAACACAGTTAGTTTCTACGTCCCGCTTTATCTTTCCAATCTTTGCGCTAACGACTGCACGTACTGTGGATTTTCCATGAGTAATCGCATCAAGCGCAAAACGCTGGATGAAGCGGATATTGCCAGGGAAAGTGCCGCTATACGGGAGATGGGCTTTGAACATCTGCTGTTAGTCACTGGTGAACATCAGGCGAAAGTGGGGATGGATTACTTTCGTCGTCATCTCCCTGCCCTTCGTGAACAGTTCTCTTCACTACAGATGGAAGTGCAACCGCTGGCGGAGACGGAATACGCCGAGTTAAAGCAACTTGGTCTGGATGGCGTGATGGTTTATCAGGAGACATATCACGAGGCGACTTATGCCCGCCATCATCTGAAAGGCAAAAAACAGGACTTCTTCTGGCGGCTGGAAACGCCGGATCGGCTGGGGCGTGCGGGGATTGATAAGATAGGCCTCGGCGCGCTAATTGGCCTTTCCGACAACTGGCGCGTTGACAGCTATATGGTTGCCGAACATTTGCTATGGCTGCAACAGCATTACTGGCAAAGCCGTTACTCTGTCTCCTTTCCGCGCCTGCGCCCGTGTACTGGCGGCATTGAGCCTGCGTCGATTATGGATGAACGCCAGTTAGTGCAAACCATCTGCGCCTTCCGACTGCTTGCACCGGAGATTGAACTGTCACTCTCCACGCGGGAATCACCGTGGTTTCGCGATCGCGTTATTCCGCTGGCGATCAATAACGTCAGCGCCTTCTCGAAAACGCAGCCAGGTGGCTATGCCGATAATCACCCCGAGTTGGAACAGTTCTCACCGCACGACGATCGCAGACCGGAAGCGGTTGCTGCCGCGTTAACCGCTCAGGGTTTGCAGCCGGTATGGAAAGACTGGGACAGCTATCTGGGACGCGCCTCGCAAAGACTATGA", + "dna_sequence_length": 1134, + "functions": [ + "tyrosine lyase, involved in thiamine-thiazole moiety synthesis" + ], + "id": "CDS_3908", + "location": [ + [ + "NC_000913", + 4191868, + "-", + 1134 + ] + ], + "md5": "b99a6e5851bba16ffcce2921f33b449a", + "parent_gene": "", + "protein_md5": "40613c31eea313212fb334ca96c6996d", + "protein_translation": "MKTFSDRWRQLDWDDIRLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAETEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDSYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013050" + ], + [ + "gene_synonym", + "ECK3982" + ], + [ + "gene_synonym", + "EcoGene:EG11589" + ], + [ + "gene_synonym", + "GI:33347812" + ], + [ + "gene_synonym", + "GeneID:948493" + ], + [ + "gene_synonym", + "JW5549" + ], + [ + "gene_synonym", + "NP_418418.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30139" + ], + [ + "gene_synonym", + "b3991" + ], + [ + "gene_synonym", + "thiB" + ], + [ + "gene_synonym", + "thiG" + ] + ], + "dna_sequence": "ATGTTACGTATTGCGGACAAAACGTTTGATTCACATCTGTTTACCGGCACAGGGAAATTCGCTTCTTCACAACTGATGGTGGAGGCGATCCGCGCTTCCGGCAGCCAGCTGGTGACACTGGCGATGAAACGTGTCGACTTGCGCCAGCACAACGACGCTATCCTCGAACCGCTTATCGCGGCGGGTGTGACCCTGCTGCCAAATACATCCGGGGCGAAAACAGCGGAAGAAGCCATTTTCGCCGCCCATCTGGCTCGTGAAGCGTTAGGCACAAACTGGTTAAAATTAGAGATTCACCCTGACGCCCGCTGGCTGTTGCCCGATCCCATCGAAACCCTGAAAGCCGCCGAAACGCTGGTACAACAGGGATTTGTCGTGCTGCCTTACTGCGGGGCCGATCCGGTATTGTGTAAACGTCTGGAAGAAGTCGGCTGTGCAGCGGTGATGCCGCTCGGCGCGCCGATTGGCTCGAATCAGGGACTGGAAACCCGCGCCATGCTGGAGATTATTATCCAGCAGGCCACAGTGCCGGTGGTTGTCGATGCTGGCATCGGCGTTCCCAGCCATGCCGCGCAGGCGCTGGAAATGGGGGCCGACGCGGTGTTAGTGAATACGGCGATTGCCGTCGCGGACGATCCCGTCAACATGGCGAAGGCATTTCGTCTGGCGGTAGAAGCAGGCCTACTGGCACGTCAGTCCGGACCGGGCAGCCGCAGTTATTTTGCTCATGCCACCAGCCCGCTGACCGGATTTCTGGAGGCATCGGCATGA", + "dna_sequence_length": 771, + "functions": [ + "thiamine biosynthesis ThiGH complex subunit" + ], + "id": "CDS_3909", + "location": [ + [ + "NC_000913", + 4192635, + "-", + 771 + ] + ], + "md5": "631ac76d71e9ef4147bbd87caf39678f", + "parent_gene": "", + "protein_md5": "696a63d9107a6a09a9347fc1818cc273", + "protein_translation": "MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSYFAHATSPLTGFLEASA", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0023907" + ], + [ + "gene_synonym", + "ECK3983" + ], + [ + "gene_synonym", + "EcoGene:EG14363" + ], + [ + "gene_synonym", + "GI:49176448" + ], + [ + "gene_synonym", + "GeneID:2847702" + ], + [ + "gene_synonym", + "JW3955" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:O32583" + ], + [ + "gene_synonym", + "YP_026279.1" + ], + [ + "gene_synonym", + "b4407" + ], + [ + "gene_synonym", + "thiS" + ] + ], + "dna_sequence": "ATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGTGCAGGATGGCGACCAGATCCTGCTTTTTCAGGTTATTGCAGGGGGTTGA", + "dna_sequence_length": 201, + "functions": [ + "immediate sulfur donor in thiazole formation" + ], + "id": "CDS_3910", + "location": [ + [ + "NC_000913", + 4192837, + "-", + 201 + ] + ], + "md5": "02bb16cf39905d7aa74c5bb96e31a700", + "parent_gene": "", + "protein_md5": "3d4d07c6d0201932400ae28cc925d661", + "protein_translation": "MQILFNDQAMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWAQHIVQDGDQILLFQVIAGG", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013053" + ], + [ + "gene_synonym", + "ECK3984" + ], + [ + "gene_synonym", + "EcoGene:EG11587" + ], + [ + "gene_synonym", + "GI:90111672" + ], + [ + "gene_synonym", + "GeneID:948500" + ], + [ + "gene_synonym", + "JW3956" + ], + [ + "gene_synonym", + "NP_418420.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30138" + ], + [ + "gene_synonym", + "b3992" + ], + [ + "gene_synonym", + "thiA" + ], + [ + "gene_synonym", + "thiF" + ] + ], + "dna_sequence": "ATGAATGACCGTGACTTTATGCGTTATAGCCGCCAAATCCTGCTCGACGATATCGCTCTGGACGGGCAGCAAAAACTGCTCGACAGCCAGGTGCTGATTATCGGTCTGGGCGGGCTGGGTACACCTGCTGCGCTGTACCTGGCGGGCGCTGGCGTCGGGACGCTGGTACTGGCAGATGACGACGATGTGCATTTAAGCAATCTGCAACGACAAATCCTCTTTACCACTGAAGATATCGATCGCCCGAAATCGCAGGTCAGCCAACAGCGACTGACACAGTTGAATCCCGACATTCAACTGACAGCATTACAACAACGGTTAACGGGTGAGGCGTTAAAAGATGCGGTTGCACGGGCCGATGTGGTGCTCGACTGTACCGACAATATGGCGACTCGCCAGGAGATTAATGCCGCCTGCGTGGCACTCAACACGCCGCTTATCACCGCCAGCGCGGTCGGATTTGGCGGTCAGTTGATGGTACTGACGCCGCCCTGGGAGCAGGGGTGTTACCGCTGCCTGTGGCCAGATAACCAGGAGCCAGAACGCAACTGCCGCACGGCGGGCGTGGTTGGCCCGGTGGTCGGGGTTATGGGCACTTTGCAGGCACTGGAAGCCATTAAGTTATTAAGCGGTATAGAGACACCTGCGGGAGAACTCCGACTGTTCGACGGTAAATCGAGCCAGTGGCGCAGCCTGGCGTTGCGCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAA", + "dna_sequence_length": 756, + "functions": [ + "adenylyltransferase, modifies ThiS C-terminus" + ], + "id": "CDS_3911", + "location": [ + [ + "NC_000913", + 4193576, + "-", + 756 + ] + ], + "md5": "2981c9d7f909e503e800ae275792e3fd", + "parent_gene": "", + "protein_md5": "671c99f93c25609cc246c5d8ff3b74af", + "protein_translation": "MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013055" + ], + [ + "gene_synonym", + "ECK3985" + ], + [ + "gene_synonym", + "EcoGene:EG11586" + ], + [ + "gene_synonym", + "GI:16131823" + ], + [ + "gene_synonym", + "GeneID:948491" + ], + [ + "gene_synonym", + "JW3957" + ], + [ + "gene_synonym", + "NP_418421.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30137" + ], + [ + "gene_synonym", + "b3993" + ], + [ + "gene_synonym", + "thiA" + ], + [ + "gene_synonym", + "thiE" + ] + ], + "dna_sequence": "ATGTATCAGCCTGATTTTCCTCCTGTACCTTTTCGTTCAGGACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGGCGTCCATTTGGGGCAGGAAGATTTGCAAGCCACCGATCTCAATGCCATCCGCGCGGCAGGCCTGCGGCTGGGCGTTTCGACACATGACGATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTATATCGCGCTGGGACATGTGTTCCCGACGCAAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTGGCGGTATCAGTCTGGCACGCGCGCCTGCGGTGATAGCAACGGGTGTCGGCAGTATCGCCGTCGTCAGCGCCATTACTCAAGCCGCAGACTGGCGTTTGGCAACGGCACAGTTGCTGGAAATTGCAGGAGTTGGCGATGAATGA", + "dna_sequence_length": 636, + "functions": [ + "thiamine phosphate synthase (thiamine phosphate pyrophosphorylase)" + ], + "id": "CDS_3912", + "location": [ + [ + "NC_000913", + 4194204, + "-", + 636 + ] + ], + "md5": "d4dc826835be30142e1cddf75205631b", + "parent_gene": "", + "protein_md5": "24082b5fe5a87c8b67f7cf654aa084db", + "protein_translation": "MYQPDFPPVPFRSGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013057" + ], + [ + "gene_synonym", + "ECK3986" + ], + [ + "gene_synonym", + "EcoGene:EG11585" + ], + [ + "gene_synonym", + "GI:16131824" + ], + [ + "gene_synonym", + "GeneID:948492" + ], + [ + "gene_synonym", + "JW3958" + ], + [ + "gene_synonym", + "NP_418422.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30136" + ], + [ + "gene_synonym", + "b3994" + ], + [ + "gene_synonym", + "thiC" + ] + ], + "dna_sequence": "ATGTCTGCAACAAAACTGACCCGCCGCGAACAACGCGCCCGGGCCCAACATTTTATCGACACCCTGGAAGGCACCGCCTTTCCCAACTCAAAACGCATTTATATCACTGGCACACACCCCGGCGTGCGCGTGCCGATGCGTGAGATCCAGCTTAGCCCGACGCTAATTGGCGGTAGCAAAGAACAGCCGCAGTACGAAGAAAACGAAGCGATTCCGGTCTACGACACCTCCGGCCCGTATGGTGATCCGCAGATTGCCATTAACGTGCAGCAAGGGCTGGCAAAACTACGCCAGCCGTGGATCGATGCGCGCGGCGATACCGAAGAACTTACCGTGCGCAGTTCCGATTACACTAAAGCGCGGCTGGCAGATGATGGCCTCGACGAACTGCGTTTTAGCGGCGTACTAACACCAAAACGCGCCAAAGCAGGACGCCGTGTCACCCAACTGCACTACGCCCGCCAGGGCATCATCACGCCGGAAATGGAATTCATCGCCATCCGCGAGAATATGGGCCGCGAGCGCATCCGTAGCGAGGTTTTACGCCACCAGCATCCGGGAATGAGCTTTGGCGCACATCTGCCGGAAAATATCACTGCGGAATTTGTCCGTGATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGGTTCGATTATGGCGAAATGGTGCCTCTCCCATCATCAGGAAAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGCGCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACGCTGGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAACCCTGCCGCAAGAGTCAGGTAAAGTCGCCCATTTTTGCTCCATGTGTGGGCCGAAATTCTGCTCGATGAAAATCAGCCAGGAAGTGCGTGATTACGCCGCCACGCAAACTATTGAAATGGGAATGGCGGATATGTCGGAGAACTTCCGTGCCAGAGGCGGAGAAATCTACCTGCGTAAGGAGGAAGCGTGA", + "dna_sequence_length": 1896, + "functions": [ + "phosphomethylpyrimidine synthase" + ], + "id": "CDS_3913", + "location": [ + [ + "NC_000913", + 4196099, + "-", + 1896 + ] + ], + "md5": "4515dd2505e77bbf7844c29938c9bafe", + "parent_gene": "", + "protein_md5": "398958a583fdeba7179430cd62a18e18", + "protein_translation": "MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSKEQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEVLRHQHPGMSFGAHLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEIYLRKEEA", + "protein_translation_length": 631, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013059" + ], + [ + "gene_synonym", + "ECK3987" + ], + [ + "gene_synonym", + "EcoGene:EG11738" + ], + [ + "gene_synonym", + "GI:16131825" + ], + [ + "gene_synonym", + "GeneID:948496" + ], + [ + "gene_synonym", + "JW3959" + ], + [ + "gene_synonym", + "NP_418423.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFX4" + ], + [ + "gene_synonym", + "b3995" + ], + [ + "gene_synonym", + "rsd" + ], + [ + "gene_synonym", + "yjaE" + ] + ], + "dna_sequence": "ATGCTTAACCAGCTCGATAACCTGACGGAGCGCGTCAGAGGAAGTAACAAACTGGTTGATCGCTGGCTACATGTACGTAAGCATCTGCTCGTGGCTTACTACAATCTGGTTGGCATTAAGCCTGGCAAAGAATCGTACATGAGGCTAAACGAAAAAGCCCTTGATGATTTTTGTCAGAGCCTGGTCGATTACTTGTCTGCCGGACATTTCAGTATTTATGAGCGCATTCTTCATAAGCTGGAAGGCAACGGGCAACTCGCGCGCGCCGCGAAGATTTGGCCGCAACTCGAAGCCAATACTCAACAGATTATGGATTACTACGATTCCAGTCTGGAAACCGCCATCGATCATGATAATTACCTTGAGTTTCAACAGGTTTTATCTGACATCGGCGAGGCGCTGGAAGCGCGCTTTGTGCTGGAAGATAAGCTGATTCTGCTGGTGCTTGACGCCGCCCGCGTCAAACATCCTGCTTGA", + "dna_sequence_length": 477, + "functions": [ + "stationary phase protein, binds sigma 70 RNA polymerase subunit" + ], + "id": "CDS_3914", + "location": [ + [ + "NC_000913", + 4196808, + "-", + 477 + ] + ], + "md5": "43634eee7e519b7a13a3f20137db00c4", + "parent_gene": "", + "protein_md5": "008d79e35bd2270915d40e060cca3867", + "protein_translation": "MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013063" + ], + [ + "gene_synonym", + "ECK3988" + ], + [ + "gene_synonym", + "EcoGene:EG11702" + ], + [ + "gene_synonym", + "GI:49176450" + ], + [ + "gene_synonym", + "GeneID:948498" + ], + [ + "gene_synonym", + "JW5548" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32664" + ], + [ + "gene_synonym", + "YP_026280.1" + ], + [ + "gene_synonym", + "b3996" + ], + [ + "gene_synonym", + "nudC" + ], + [ + "gene_synonym", + "yjaD" + ] + ], + "dna_sequence": "ATGGATCGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGATGCTGTGCAGCCATTGCCGTGAGCGTTACTACCCGCAAATCGCCCCCTGCATTATTGTTGCCATCCGTCGCGATGATTCGATCCTCCTCGCCCAGCATACCCGCCATCGTAACGGTGTCCATACAGTACTTGCCGGATTCGTCGAAGTGGGCGAAACCCTCGAGCAGGCAGTCGCGCGGGAAGTGATGGAAGAGAGCGGAATTAAAGTTAAAAACTTGCGTTACGTGACTTCTCAGCCGTGGCCGTTTCCTCAGTCTTTAATGACCGCGTTTATGGCGGAATATGACAGCGGCGACATCGTGATCGACCCGAAAGAATTGCTCGAGGCGAACTGGTATCGCTATGACGATTTGCCGTTACTCCCGCCGCCCGGCACCGTAGCGCGCCGTCTGATAGAAGATACGGTGGCGATGTGTCGGGCAGAGTATGAGTGA", + "dna_sequence_length": 774, + "functions": [ + "NADH pyrophosphatase" + ], + "id": "CDS_3915", + "location": [ + [ + "NC_000913", + 4196903, + "+", + 774 + ] + ], + "md5": "e0443ae49ef6ea827482f630517818d7", + "parent_gene": "", + "protein_md5": "9fae77ec817b5fcd7c21904222a9dd9b", + "protein_translation": "MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013066" + ], + [ + "gene_synonym", + "ECK3989" + ], + [ + "gene_synonym", + "EcoGene:EG11543" + ], + [ + "gene_synonym", + "GI:16131827" + ], + [ + "gene_synonym", + "GeneID:948497" + ], + [ + "gene_synonym", + "JW3961" + ], + [ + "gene_synonym", + "NP_418425.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29680" + ], + [ + "gene_synonym", + "b3997" + ], + [ + "gene_synonym", + "hemC" + ], + [ + "gene_synonym", + "hemE" + ] + ], + "dna_sequence": "ATGACCGAACTTAAAAACGATCGTTATCTGCGGGCGCTGCTGCGCCAGCCCGTTGATGTCACTCCAGTATGGATGATGCGCCAGGCGGGTCGCTATCTACCGGAATATAAAGCCACGCGCGCCCAGGCAGGCGATTTTATGTCGCTGTGCAAAAACGCCGAGCTGGCGTGCGAAGTGACTTTGCAACCGCTGCGTCGCTACCCGCTGGATGCGGCGATCCTCTTTTCCGATATCCTCACCGTGCCGGACGCGATGGGGTTAGGGCTCTATTTTGAAGCCGGAGAAGGTCCGCGTTTTACCTCGCCAGTCACCTGCAAAGCTGACGTCGATAAACTGCCAATTCCGGACCCGGAAGATGAACTGGGTTACGTGATGAACGCGGTGCGTACCATTCGTCGCGAACTGAAAGGCGAAGTGCCGCTGATTGGTTTTTCCGGCAGCCCGTGGACGCTGGCGACCTACATGGTGGAAGGCGGCAGCAGCAAAGCCTTCACCGTGATCAAAAAAATGATGTATGCCGATCCGCAGGCGCTGCACGCTCTGCTCGATAAACTGGCGAAAAGCGTCACTTTGTATCTGAATGCGCAGATTAAAGCCGGTGCTCAGGCAGTGATGATTTTCGACACCTGGGGCGGCGTGCTTACCGGGCGCGATTATCAACAGTTCTCGCTCTATTACATGCATAAAATTGTTGATGGTTTACTGCGTGAAAACGACGGTCGCCGCGTACCGGTCACGCTGTTTACCAAAGGCGGCGGACAGTGGCTGGAAGCCATGGCAGAAACCGGTTGCGATGCGCTGGGCCTCGACTGGACAACGGACATCGCCGATGCGCGCCGCCGTGTGGGCAATAAAGTCGCGTTGCAGGGTAATATGGATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTGCATCGACTGTCTGAACAGTATCACCGCTAA", + "dna_sequence_length": 1065, + "functions": [ + "uroporphyrinogen decarboxylase" + ], + "id": "CDS_3916", + "location": [ + [ + "NC_000913", + 4197716, + "+", + 1065 + ] + ], + "md5": "6dc8ac9cd613b1375b084f6f1ea051c5", + "parent_gene": "", + "protein_md5": "c11af8cb9a5dedf563e02e64908817c1", + "protein_translation": "MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSEQYHR", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013068" + ], + [ + "gene_synonym", + "ECK3990" + ], + [ + "gene_synonym", + "EcoGene:EG11915" + ], + [ + "gene_synonym", + "GI:90111673" + ], + [ + "gene_synonym", + "GeneID:948502" + ], + [ + "gene_synonym", + "JW5547" + ], + [ + "gene_synonym", + "NP_418426.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68739" + ], + [ + "gene_synonym", + "b3998" + ], + [ + "gene_synonym", + "nfi" + ], + [ + "gene_synonym", + "yjaF" + ] + ], + "dna_sequence": "ATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTGGGAGATGCTGTCGCAAAAGCCGGATTTAGTGTTTGTCGATGGTCATGGGATCTCGCATCCTCGCCGTCTTGGCGTCGCCAGCCATTTTGGCTTATTGGTGGATGTGCCGACCATTGGCGTGGCGAAAAAACGGCTCTGCGGTAAATTCGAACCGCTCTCCAGCGAACCGGGCGCGCTGGCCCCACTGATGGATAAAGGCGAGCAGCTGGCCTGGGTCTGGCGCAGCAAAGCGCGCTGTAACCCGTTGTTTATCGCTACCGGCCATCGGGTCAGCGTGGACAGCGCGCTGGCGTGGGTACAACGCTGCATGAAAGGCTATCGTCTGCCGGAGCCAACGCGCTGGGCGGACGCGGTGGCCTCGGAACGTCCGGCGTTCGTGCGCTATACAGCAAATCAGCCCTAA", + "dna_sequence_length": 672, + "functions": [ + "endonuclease V", + "deoxyinosine 3' endonuclease" + ], + "id": "CDS_3917", + "location": [ + [ + "NC_000913", + 4198790, + "+", + 672 + ] + ], + "md5": "7449c79c10bca098c8b6524b7649965f", + "parent_gene": "", + "protein_md5": "879ad00cedf9a671b268009d65d7016e", + "protein_translation": "MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013070" + ], + [ + "gene_synonym", + "ECK3991" + ], + [ + "gene_synonym", + "EcoGene:EG11916" + ], + [ + "gene_synonym", + "GI:16131829" + ], + [ + "gene_synonym", + "GeneID:948501" + ], + [ + "gene_synonym", + "JW3963" + ], + [ + "gene_synonym", + "NP_418427.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32680" + ], + [ + "gene_synonym", + "b3999" + ], + [ + "gene_synonym", + "yjaG" + ] + ], + "dna_sequence": "ATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATGCGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCATTCTCGATCTCATCTGGGAAACGCTGACCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCCGACGATTTCGATCTGTACGGCGTTTATCCGGCAATCGATGCCTGCGTGGCGTTAAGTGAACTGGTCCATTCGCGTTTGAGTGGTGAAACGCTCGAACACGCGGTGGAAGTGAGTAAGACCTCCATCACGACCGTTGCGATGCTGGAAATGACTCAGGCTGGTCGCGAAATGAGCGATGAAGAGCTTAAAGAAAACCCAGCTGTAGAGCAAGAATGGGACATTCAGTGGGAAATATTCCGACTTTTAGCTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAA", + "dna_sequence_length": 591, + "functions": [ + "DUF416 domain protein" + ], + "id": "CDS_3918", + "location": [ + [ + "NC_000913", + 4199504, + "+", + 591 + ] + ], + "md5": "195aff0fd0c04244c0aac8a72160209b", + "parent_gene": "", + "protein_md5": "9f04afa78cf67b2eff76743038ca0735", + "protein_translation": "MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013077" + ], + [ + "gene_synonym", + "ECK3992" + ], + [ + "gene_synonym", + "EcoGene:EG10466" + ], + [ + "gene_synonym", + "GI:16131830" + ], + [ + "gene_synonym", + "GeneID:948499" + ], + [ + "gene_synonym", + "JW3964" + ], + [ + "gene_synonym", + "NP_418428.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACF0" + ], + [ + "gene_synonym", + "b4000" + ], + [ + "gene_synonym", + "hupA" + ] + ], + "dna_sequence": "ATGAACAAGACTCAACTGATTGATGTAATTGCAGAGAAAGCAGAACTGTCCAAAACCCAGGCTAAAGCTGCTCTGGAGTCCACTCTGGCTGCAATTACTGAGTCTCTGAAAGAAGGCGATGCTGTACAACTGGTTGGTTTCGGTACCTTCAAAGTGAACCACCGCGCTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAA", + "dna_sequence_length": 273, + "functions": [ + "HU, DNA-binding transcriptional regulator, alpha subunit" + ], + "id": "CDS_3919", + "location": [ + [ + "NC_000913", + 4200281, + "+", + 273 + ] + ], + "md5": "4338e287073626f3607d5b873de7ac9b", + "parent_gene": "", + "protein_md5": "4939a1cdd4b26c7d9053b02c16db7e41", + "protein_translation": "MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013079" + ], + [ + "gene_synonym", + "ECK3993" + ], + [ + "gene_synonym", + "EcoGene:EG11917" + ], + [ + "gene_synonym", + "GI:16131831" + ], + [ + "gene_synonym", + "GeneID:948508" + ], + [ + "gene_synonym", + "JW3965" + ], + [ + "gene_synonym", + "NP_418429.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32681" + ], + [ + "gene_synonym", + "b4001" + ], + [ + "gene_synonym", + "yjaH" + ] + ], + "dna_sequence": "GTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGGCTGGCGCTCTGCTTCTCACTGCCTGTAGTCATAACTCTTCACTTCCTCCCTTTACCGCCAGTGGATTTGCTGAAGACCAGGGCGCGGTACGCATCTGGCGAAAAGACAGCGGCGATAATGTGCATCTGCTTGCCGTGTTTAGCCCGTGGCGCAGTGGCGATACCACGACGCGAGAGTATCGCTGGCAGGGCGATAACCTCACGCTCATCAATATCAATGTTTACAGCAAACCGCCGGTGAATATTCGCGCGCGTTTTGACGATCGCGGTGATCTGAGCTTTATGCAACGTGAATCCGATGGGGAAAAGCAGCAGCTTTCTAACGACCAAATCGATTTATACCGTTATCGTGCTGATCAGATCCGCCAGATTAGCGATGCCTTACGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGA", + "dna_sequence_length": 696, + "functions": [ + "DUF1481 family putative lipoprotein" + ], + "id": "CDS_3920", + "location": [ + [ + "NC_000913", + 4200566, + "+", + 696 + ] + ], + "md5": "2961d7fa3a3bf14e41aee6c68aff12f9", + "parent_gene": "", + "protein_md5": "9096bcd0c836646ce2ec97abf38e01c2", + "protein_translation": "MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013081" + ], + [ + "gene_synonym", + "ECK3994" + ], + [ + "gene_synonym", + "EcoGene:EG11918" + ], + [ + "gene_synonym", + "GI:90111674" + ], + [ + "gene_synonym", + "GeneID:948507" + ], + [ + "gene_synonym", + "JW5546" + ], + [ + "gene_synonym", + "NP_418430.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAA9" + ], + [ + "gene_synonym", + "b4002" + ], + [ + "gene_synonym", + "yjaI" + ], + [ + "gene_synonym", + "zra" + ], + [ + "gene_synonym", + "zraP" + ] + ], + "dna_sequence": "ATGAAACGGAACACGAAAATTGCCCTGGTAATGATGGCGCTTTCAGCAATGGCGATGGGATCGACATCTGCATTTGCTCACGGCGGACACGGTATGTGGCAGCAAAATGCCGCGCCTTTGACCAGCGAACAACAGACAGCGTGGCAGAAAATCCATAATGACTTTTACGCTCAAAGCAGCGCACTGCAACAGCAACTGGTGACGAAGCGTTATGAATACAATGCCCTGTTAGCCGCGAACCCACCGGATAGCAGCAAAATTAACGCGGTCGCCAAAGAGATGGAGAATTTGCGTCAGTCGTTAGATGAGTTACGGGTGAAACGAGATATCGCGATGGCTGAAGCGGGTATTCCGCGCGGAGCCGGAATGGGCATGGGCTACGGCGGCTGCGGTGGTGGCGGTCATATGGGTATGGGCCACTGGTAA", + "dna_sequence_length": 426, + "functions": [ + "Zn-dependent periplasmic chaperone" + ], + "id": "CDS_3921", + "location": [ + [ + "NC_000913", + 4201688, + "-", + 426 + ] + ], + "md5": "930d1e4c614292499569cd4f1af51da9", + "parent_gene": "", + "protein_md5": "f98a58f47a72c930b718f4f929f7f8fa", + "protein_translation": "MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013088" + ], + [ + "gene_synonym", + "ECK3995" + ], + [ + "gene_synonym", + "EcoGene:EG10008" + ], + [ + "gene_synonym", + "GI:16131833" + ], + [ + "gene_synonym", + "GeneID:948506" + ], + [ + "gene_synonym", + "JW3967" + ], + [ + "gene_synonym", + "NP_418431.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14377" + ], + [ + "gene_synonym", + "b4003" + ], + [ + "gene_synonym", + "hydH" + ], + [ + "gene_synonym", + "zraS" + ] + ], + "dna_sequence": "ATGCGTTTTATGCAACGTTCTAAAGACTCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGAAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGAGTGTTGTGGTTCGCAGTCACCGATGCGCAGGGCATCATTATTCTTCATAGCGACCCCGATAAGGTCGGGCGTGCGCTCTATTCGCCGGATGAAATGCAGAAATTAAAGCCAGAGGAAAACTCCCGCTGGCGGCTGCTTGGGAAAACGGAAACTACGCCTGCACTTGAGGTCTATCGTTTGTTCCAGCCAATGTCAGCGCCCTGGCGGCATGGAATGCACAATATGCCGCGCTGTAACGGCAAAGCTGTGCCACAAGTAGATGCACAACAGGCTATTTTTATCGCCGTTGATGCCAGTGATCTGGTTGCAACCCAGAGTGGGGAAAAGCGCAATACCCTGATTATCCTCTTCGCCCTGGCGACGGTCTTGCTGGCAAGCGTATTGTCATTCTTCTGGTATCGCCGCTATCTGCGCTCGCGCCAGCTTCTACAAGATGAAATGAAGCGCAAAGAGAAGCTGGTGGCGCTGGGGCATCTTGCGGCAGGCGTTGCCCACGAAATCCGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGTAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGCCAACGACACATTACCGGAAATTCAGGCCGACCCGGACAGGCTGACTCAGGTCCTGTTGAATCTCTATCTCAATGCTATTCAGGCGATTGGTCAGCATGGCGTGATTAGCGTGACGGCCAGCGAAAGCGGCGCGGGCGTGAAAATCAGCGTTACCGACAGCGGTAAGGGAATTGCGGCAGATCAGCTTGATGCCATCTTCACTCCGTACTTCACCACTAAAGCCGAAGGCACCGGATTGGGGCTGGCGGTCGTGCATAATATTGTTGAACAACACGGTGGTACAATTCAGGTCGCAAGCCAGGAGGGAAAAGGCTCAACGTTCACCCTCTGGCTTCCGGTCAATATTACGCGTAAGGACCCACAAGGATGA", + "dna_sequence_length": 1398, + "functions": [ + "sensory histidine kinase in two-component regulatory system with ZraR" + ], + "id": "CDS_3922", + "location": [ + [ + "NC_000913", + 4201926, + "+", + 1398 + ] + ], + "md5": "e5e4b4417e4446bb9031a510fe317c90", + "parent_gene": "", + "protein_md5": "b617dd78099efe385cdcd9a505a991d3", + "protein_translation": "MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRASEADRQALLEKGNVLIRALESGSRVGMGMRMHHVQQQALLEEMAGQPGVLWFAVTDAQGIIILHSDPDKVGRALYSPDEMQKLKPEENSRWRLLGKTETTPALEVYRLFQPMSAPWRHGMHNMPRCNGKAVPQVDAQQAIFIAVDASDLVATQSGEKRNTLIILFALATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKGIAADQLDAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVNITRKDPQG", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013093" + ], + [ + "gene_synonym", + "ECK3996" + ], + [ + "gene_synonym", + "EcoGene:EG10482" + ], + [ + "gene_synonym", + "GI:16131834" + ], + [ + "gene_synonym", + "GeneID:948505" + ], + [ + "gene_synonym", + "JW3968" + ], + [ + "gene_synonym", + "NP_418432.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14375" + ], + [ + "gene_synonym", + "b4004" + ], + [ + "gene_synonym", + "hydG" + ], + [ + "gene_synonym", + "zraR" + ] + ], + "dna_sequence": "ATGACGCACGATAATATCGATATTCTGGTGGTGGATGATGACATTAGCCACTGCACTATTTTGCAGGCTTTACTGCGCGGCTGGGGCTATAACGTCGCGCTGGCGAACAGCGGGCGACAGGCGTTGGAGCAGGTGCGGGAACAGGTTTTTGATCTTGTGCTTTGCGATGTGCGAATGGCGGAGATGGACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCTCGTCGCGCCATCGGAAGCCACGGTACTGATCCACGGCGATTCCGGCACCGGTAAAGAGCTGGTCGCCAGGGCGATTCACGCCAGTAGCGCACGTAGCGAAAAACCGCTGGTAACGCTCAACTGTGCGGCACTCAACGAATCCTTGCTGGAATCTGAATTGTTCGGTCACGAAAAAGGGGCGTTTACTGGAGCCGATAAACGCCGGGAAGGGCGCTTTGTTGAGGCGGACGGCGGCACGCTGTTTCTCGATGAAATTGGCGATATCTCGCCGATGATGCAGGTGCGTCTGCTGCGTGCGATTCAGGAGCGCGAAGTTCAGCGTGTCGGTAGCAACCAGATTATCTCGGTTGATGTCCGGCTGATTGCGGCGACCCATCGCGATCTTGCCGCAGAGGTGAATGCCGGGCGTTTTCGCCAGGATCTCTACTATCGCCTGAATGTGGTGGCGATTGAAGTACCATCGCTGCGGCAACGGCGGGAAGATATCCCTCTGCTGGCTGGCCATTTTCTGCAGCGCTTTGCCGAGCGTAATCGCAAGGCGGTAAAAGGTTTTACGCCCCAGGCGATGGATCTGTTGATTCATTACGACTGGCCGGGAAATATTCGTGAGCTGGAAAACGCGGTGGAACGGGCAGTGGTGCTGCTGACCGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCTATTGGCAAAACTGTCGCGTTAG", + "dna_sequence_length": 1326, + "functions": [ + "fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein" + ], + "id": "CDS_3923", + "location": [ + [ + "NC_000913", + 4203320, + "+", + 1326 + ] + ], + "md5": "27fdbadbd34cf45550a2f0acca057d87", + "parent_gene": "", + "protein_md5": "30bd5c963105de755b89ed32247b10cd", + "protein_translation": "MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR", + "protein_translation_length": 441, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013095" + ], + [ + "gene_synonym", + "ECK3997" + ], + [ + "gene_synonym", + "EcoGene:EG10792" + ], + [ + "gene_synonym", + "GI:16131835" + ], + [ + "gene_synonym", + "GeneID:948504" + ], + [ + "gene_synonym", + "JW3969" + ], + [ + "gene_synonym", + "NP_418433.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15640" + ], + [ + "gene_synonym", + "adth" + ], + [ + "gene_synonym", + "b4005" + ], + [ + "gene_synonym", + "purD" + ] + ], + "dna_sequence": "ATGAAAGTATTAGTGATTGGTAACGGCGGGCGCGAGCACGCGCTGGCCTGGAAAGCGGCCCAGTCGCCGCTGGTTGAGACTGTTTTTGTTGCTCCGGGTAATGCAGGCACTGCACTGGAACCCGCGCTGCAAAACGTTGCTATTGGCGTGACCGATATCCCGGCGCTGTTGGATTTCGCACAAAACGAAAAGATTGATCTGACCATCGTCGGCCCGGAAGCGCCGCTGGTGAAAGGCGTGGTCGATACCTTCCGCGCCGCCGGGCTGAAAATCTTCGGCCCAACCGCAGGTGCGGCCCAACTGGAAGGCTCAAAAGCGTTTACCAAAGATTTCCTGGCCCGCCATAAGATCCCTACGGCGGAATACCAGAACTTCACCGAGGTAGAACCTGCGCTGGCGTATCTGCGTGAGAAAGGCGCGCCAATCGTCATTAAAGCGGACGGTCTGGCTGCCGGGAAAGGCGTTATCGTGGCGATGACGCTGGAAGAAGCGGAAGCGGCTGTTCACGATATGCTGGCGGGCAACGCTTTTGGCGACGCGGGTCATCGCATCGTTATCGAAGAGTTCCTCGATGGCGAAGAAGCGAGCTTTATCGTGATGGTGGACGGCGAGCATGTGCTGCCGATGGCTACCAGCCAGGATCACAAACGCGTAGGCGATAAAGATACCGGACCAAACACCGGCGGGATGGGCGCTTACTCCCCCGCGCCGGTAGTAACCGATGACGTTCATCAGCGCACCATGGAACGTATTATCTGGCCAACCGTGAAAGGCATGGCGGCGGAAGGCAACACCTACACCGGTTTTCTCTACGCGGGCCTGATGATCGACAAACAGGGCAATCCGAAGGTTATTGAATTTAACTGCCGCTTTGGCGATCCGGAAACCCAGCCGATTATGCTGCGCATGAAGTCCGATCTGGTTGAGCTCTGCCTGGCGGCCTGTGAAAGCAAACTGGACGAGAAAACGTCCGAGTGGGATGAACGCGCTTCTCTCGGCGTGGTGATGGCTGCGGGTGGATATCCGGGTGATTACCGCACCGGTGACGTGATCCACGGCCTGCCGCTGGAAGAAGTGGCAGGCGGCAAAGTGTTCCACGCGGGCACAAAACTGGCGGATGACGAGCAGGTAGTGACCAACGGCGGGCGCGTACTGTGCGTCACCGCGCTGGGTCATACCGTGGCAGAAGCGCAGAAACGCGCCTATGCCTTAATGACCGATATCCACTGGGACGACTGCTTCTGCCGGAAAGATATCGGCTGGCGCGCTATCGAACGCGAGCAGAACTAA", + "dna_sequence_length": 1290, + "functions": [ + "phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase" + ], + "id": "CDS_3924", + "location": [ + [ + "NC_000913", + 4205931, + "-", + 1290 + ] + ], + "md5": "bb265a931d24e1a0924b15c01edc96ae", + "parent_gene": "", + "protein_md5": "9fb7f91c80c2a57277a226f2fc597147", + "protein_translation": "MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013097" + ], + [ + "gene_synonym", + "ECK3998" + ], + [ + "gene_synonym", + "EcoGene:EG10795" + ], + [ + "gene_synonym", + "GI:16131836" + ], + [ + "gene_synonym", + "GeneID:948503" + ], + [ + "gene_synonym", + "JW3970" + ], + [ + "gene_synonym", + "NP_418434.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15639" + ], + [ + "gene_synonym", + "b4006" + ], + [ + "gene_synonym", + "purH" + ] + ], + "dna_sequence": "ATGCAACAACGTCGTCCAGTCCGCCGCGCTCTGCTCAGTGTTTCTGACAAAGCCGGTATCGTCGAATTCGCCCAGGCACTTTCCGCACGCGGTGTGGAGCTGCTGTCTACAGGGGGCACTGCCCGTCTGTTAGCAGAAAAAGGTCTGCCGGTAACCGAAGTTTCCGATTACACCGGTTTCCCGGAGATGATGGATGGACGCGTGAAGACCCTGCATCCGAAAGTACATGGTGGCATTCTGGGCCGTCGCGGCCAGGACGATGCCATTATGGAAGAACATCAGATCCAGCCTATCGATATGGTGGTTGTTAACCTGTATCCGTTCGCCCAGACCGTGGCCCGTGAAGGTTGCTCGCTGGAAGATGCGGTTGAGAACATCGATATCGGCGGCCCAACGATGGTGCGCTCCGCCGCCAAGAACCATAAAGATGTCGCAATCGTGGTGAAGAGCAGCGACTATGACGCCATTATTAAAGAGATGGATGACAACGAAGGATCGCTGACGCTTGCAACCCGTTTCGACCTCGCCATCAAAGCCTTCGAACACACTGCCGCCTACGACAGCATGATTGCCAACTACTTCGGCAGCATGGTTCCGGCTTACCACGGTGAAAGCAAAGAAGCCGCCGGTCGCTTCCCACGCACGCTGAACCTGAACTTCATTAAGAAGCTGGATATGCGTTACGGCGAGAACAGCCACCAGCAGGCTGCCTTCTATATAGAAGAGAATGTGAAAGAAGCCTCCGTTGCTACCGCAACCCAGGTTCAGGGTAAAGCCCTCTCTTATAACAACATCGCCGATACCGATGCGGCGCTGGAGTGCGTGAAAGAGTTCGCCGAGCCGGCATGTGTGATTGTGAAGCACGCCAACCCTTGCGGCGTGGCTATCGGCAATTCCATTCTTGATGCTTACGATCGCGCGTACAAAACCGACCCAACCTCCGCATTCGGCGGCATCATTGCCTTTAACCGCGAGCTGGATGCGGAAACCGCACAGGCCATCATTTCTCGTCAGTTTGTCGAAGTGATTATTGCGCCGTCCGCCAGCGAAGAAGCCCTGAAAATCACCGCCGCCAAACAGAACGTACGCGTTCTGACCTGCGGTCAGTGGGGCGAGCGTGTTCCGGGCCTCGATTTCAAACGCGTGAACGGCGGTCTGCTGGTTCAGGATCGTGACCTGGGGATGGTCGGTGCGGAAGAACTGCGCGTGGTGACCAAACGTCAGCCGAGCGAACAGGAACTGCGTGATGCGCTGTTCTGCTGGAAGGTGGCGAAGTTTGTGAAATCCAACGCTATCGTCTATGCCAAAAACAATATGACTATCGGCATTGGCGCGGGCCAGATGAGCCGCGTGTACTCCGCAAAAATCGCCGGTATTAAAGCGGCCGATGAAGGCCTGGAAGTGAAAGGTTCCTCGATGGCTTCTGACGCGTTCTTCCCGTTCCGCGACGGTATTGATGCCGCCGCCGCTGCGGGCGTGACCTGCGTAATCCAGCCTGGCGGTTCTATCCGTGATGACGAAGTGATTGCCGCCGCCGACGAGCACGGTATTGCGATGCTCTTCACCGACATGCGCCACTTCCGCCATTAA", + "dna_sequence_length": 1590, + "functions": [ + "IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase" + ], + "id": "CDS_3925", + "location": [ + [ + "NC_000913", + 4207532, + "-", + 1590 + ] + ], + "md5": "e065eebc59834cce83b49151404238b8", + "parent_gene": "", + "protein_md5": "93ad988d60fa22a774eb6f08673a912f", + "protein_translation": "MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVVVNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMDDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKLDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMVGAEELRVVTKRQPSEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH", + "protein_translation_length": 529, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013112" + ], + [ + "gene_synonym", + "ECK4003" + ], + [ + "gene_synonym", + "EcoGene:EG11206" + ], + [ + "gene_synonym", + "GI:16131837" + ], + [ + "gene_synonym", + "GeneID:948515" + ], + [ + "gene_synonym", + "JW3971" + ], + [ + "gene_synonym", + "NP_418435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09162" + ], + [ + "gene_synonym", + "b4011" + ], + [ + "gene_synonym", + "yjaA" + ] + ], + "dna_sequence": "ATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGCCAATTTCTTTGTTGCAGAAAAAGTTCTGCAAGATCTTGTTCTGCAACTCCACCCACGTTCAACCTGGCATTCTTTTTTGCCAGCAAAACGTATGGATATTGTTGTGAGCGCACTGGAAATGAATGAGGGCGGTTTGTCACAGGTTGAGGAACGCATTCTCCATGAAGTGGTCGCTGGGGCAACGTTAATGAAATATCGCCAGTTCCACATCCATGCGCAATCAGCGGTACTCAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAA", + "dna_sequence_length": 384, + "functions": [ + "stress-induced protein" + ], + "id": "CDS_3926", + "location": [ + [ + "NC_000913", + 4213234, + "+", + 384 + ] + ], + "md5": "2e7d5eea36893817fb1e02b0ca37ca8c", + "parent_gene": "", + "protein_md5": "98f07b15e6e041c2a3df84a71c2893f7", + "protein_translation": "MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013114" + ], + [ + "gene_synonym", + "ECK4004" + ], + [ + "gene_synonym", + "EcoGene:EG11207" + ], + [ + "gene_synonym", + "GI:16131838" + ], + [ + "gene_synonym", + "GeneID:948514" + ], + [ + "gene_synonym", + "JW3972" + ], + [ + "gene_synonym", + "NP_418436.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09163" + ], + [ + "gene_synonym", + "b4012" + ], + [ + "gene_synonym", + "yjaB" + ] + ], + "dna_sequence": "ATGGTTATTAGTATTCGCCGCTCACGGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGGTGTCGTTCTGTCGATGCCACTCACGATTTTCTATCAGCAGAGTATCGGACCGAGCTGGAGGACCTAGTTCGTTCCTTCCTGCCGGAAGCGCCGTTGTGGGTCGCGGTTAATGAGCGGGATCAGCCGGTTGGATTTATGTTGCTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCTGATGTGCGCGGCTGCGGCGTAGGTCGGGTGCTGGTGGAGCATGCGCTCTCGATGGCACCGGAACTGACAACCAACGTTAATGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTGGGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGCGTAG", + "dna_sequence_length": 444, + "functions": [ + "GNAT-family putative N-acetyltransferase", + "acetyl coenzyme A-binding protein" + ], + "id": "CDS_3927", + "location": [ + [ + "NC_000913", + 4214123, + "-", + 444 + ] + ], + "md5": "4a23fb435dc80674cf6e00bae46e3091", + "parent_gene": "", + "protein_md5": "e82b1aa1f92f0bd46703b0ee99655019", + "protein_translation": "MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRVLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGA", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013121" + ], + [ + "gene_synonym", + "ECK4005" + ], + [ + "gene_synonym", + "EcoGene:EG10581" + ], + [ + "gene_synonym", + "GI:16131839" + ], + [ + "gene_synonym", + "GeneID:948513" + ], + [ + "gene_synonym", + "JW3973" + ], + [ + "gene_synonym", + "NP_418437.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07623" + ], + [ + "gene_synonym", + "b4013" + ], + [ + "gene_synonym", + "metA" + ] + ], + "dna_sequence": "ATGCCGATTCGTGTGCCGGACGAGCTACCCGCCGTCAATTTCTTGCGTGAAGAAAACGTCTTTGTGATGACAACTTCTCGTGCGTCTGGTCAGGAAATTCGTCCACTTAAGGTTCTGATCCTTAACCTGATGCCGAAGAAGATTGAAACTGAAAATCAGTTTCTGCGCCTGCTTTCAAACTCACCTTTGCAGGTCGATATTCAGCTGTTGCGCATCGATTCCCGTGAATCGCGCAACACGCCCGCAGAGCATCTGAACAACTTCTACTGTAACTTTGAAGATATTCAGGATCAGAACTTTGACGGTTTGATTGTAACTGGTGCGCCGCTGGGCCTGGTGGAGTTTAATGATGTCGCTTACTGGCCGCAGATCAAACAGGTGCTGGAGTGGTCGAAAGATCACGTCACCTCGACGCTGTTTGTCTGCTGGGCGGTACAGGCCGCGCTCAATATCCTCTACGGCATTCCTAAGCAAACTCGCACCGAAAAACTCTCTGGCGTTTACGAGCATCATATTCTCCATCCTCATGCGCTTCTGACGCGTGGCTTTGATGATTCATTCCTGGCACCGCATTCGCGCTATGCTGACTTTCCGGCAGCGTTGATTCGTGATTACACCGATCTGGAAATTCTGGCAGAGACGGAAGAAGGGGATGCATATCTGTTTGCCAGTAAAGATAAGCGCATTGCCTTTGTGACGGGCCATCCCGAATATGATGCGCAAACGCTGGCGCAGGAATTTTTCCGCGATGTGGAAGCCGGACTAGACCCGGATGTACCGTATAACTATTTCCCGCACAATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGATCTACGGCACATGAATCCAACGCTGGATTAA", + "dna_sequence_length": 930, + "functions": [ + "homoserine O-transsuccinylase" + ], + "id": "CDS_3928", + "location": [ + [ + "NC_000913", + 4214280, + "+", + 930 + ] + ], + "md5": "8a5b049d22b362cfacfa25fc27cfce48", + "parent_gene": "", + "protein_md5": "3d96cb1101bbc5af060f8eea8e42733a", + "protein_translation": "MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQDQNFDGLIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTEKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDAQTLAQEFFRDVEAGLDPDVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013125" + ], + [ + "gene_synonym", + "ECK4006" + ], + [ + "gene_synonym", + "EcoGene:EG10023" + ], + [ + "gene_synonym", + "GI:16131840" + ], + [ + "gene_synonym", + "GeneID:948512" + ], + [ + "gene_synonym", + "JW3974" + ], + [ + "gene_synonym", + "NP_418438.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08997" + ], + [ + "gene_synonym", + "aceB" + ], + [ + "gene_synonym", + "b4014" + ], + [ + "gene_synonym", + "mas" + ] + ], + "dna_sequence": "ATGACTGAACAGGCAACAACAACCGATGAACTGGCTTTCACAAGGCCGTATGGCGAGCAGGAGAAGCAAATTCTTACTGCCGAAGCGGTAGAATTTCTGACTGAGCTGGTGACGCATTTTACGCCACAACGCAATAAACTTCTGGCAGCGCGCATTCAGCAGCAGCAAGATATTGATAACGGAACGTTGCCTGATTTTATTTCGGAAACAGCTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGGCAAATTAACCTGCGTGATGCGGTTAACGGCACCATCAGTTACACCAATGAAGCAGGCAAAATTTACCAGCTCAAGCCCAATCCAGCGGTTTTGATTTGTCGGGTACGCGGTCTGCACTTGCCGGAAAAACATGTCACCTGGCGTGGTGAGGCAATCCCCGGCAGCCTGTTTGATTTTGCGCTCTATTTCTTCCACAACTATCAGGCACTGTTGGCAAAGGGCAGTGGTCCCTATTTCTATCTGCCGAAAACCCAGTCCTGGCAGGAAGCGGCCTGGTGGAGCGAAGTCTTCAGCTATGCAGAAGATCGCTTTAATCTGCCGCGCGGCACCATCAAGGCGACGTTGCTGATTGAAACGCTGCCCGCCGTGTTCCAGATGGATGAAATCCTTCACGCGCTGCGTGACCATATTGTTGGTCTGAACTGCGGTCGTTGGGATTACATCTTCAGCTATATCAAAACGTTGAAAAACTATCCCGATCGCGTCCTGCCAGACAGACAGGCAGTGACGATGGATAAACCATTCCTGAATGCTTACTCACGCCTGTTGATTAAAACCTGCCATAAACGCGGTGCTTTTGCGATGGGCGGCATGGCGGCGTTTATTCCGAGCAAAGATGAAGAGCACAATAACCAGGTGCTCAACAAAGTAAAAGCGGATAAATCGCTGGAAGCCAATAACGGTCACGATGGCACATGGATCGCTCACCCAGGCCTTGCGGACACGGCAATGGCGGTATTCAACGACATTCTCGGCTCCCGTAAAAATCAGCTTGAAGTGATGCGCGAACAAGACGCGCCGATTACTGCCGATCAGCTGCTGGCACCTTGTGATGGTGAACGCACCGAAGAAGGTATGCGCGCCAACATTCGCGTGGCTGTGCAGTACATCGAAGCGTGGATCTCTGGCAACGGCTGTGTGCCGATTTATGGCCTGATGGAAGATGCGGCGACGGCTGAAATTTCCCGTACCTCGATCTGGCAGTGGATCCATCATCAAAAAACGTTGAGCAATGGCAAACCGGTGACCAAAGCCTTGTTCCGCCAGATGCTGGGCGAAGAGATGAAAGTCATTGCCAGCGAACTGGGCGAAGAACGTTTCTCCCAGGGGCGTTTTGACGATGCCGCACGCTTGATGGAACAGATCACCACTTCCGATGAGTTAATTGATTTCCTGACCCTGCCAGGCTACCGCCTGTTAGCGTAA", + "dna_sequence_length": 1602, + "functions": [ + "malate synthase A" + ], + "id": "CDS_3929", + "location": [ + [ + "NC_000913", + 4215478, + "+", + 1602 + ] + ], + "md5": "04a719eceba5aaa7f0d6b92b8ec679f0", + "parent_gene": "", + "protein_md5": "8b9be9c80db3d271bd73dd7b1e08fe27", + "protein_translation": "MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDNGTLPDFISETASIRDADWKIRGIPADLEDRRVEITGPVERKMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYRLLA", + "protein_translation_length": 533, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013128" + ], + [ + "gene_synonym", + "ECK4007" + ], + [ + "gene_synonym", + "EcoGene:EG10022" + ], + [ + "gene_synonym", + "GI:16131841" + ], + [ + "gene_synonym", + "GeneID:948517" + ], + [ + "gene_synonym", + "JW3975" + ], + [ + "gene_synonym", + "NP_418439.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G6" + ], + [ + "gene_synonym", + "aceA" + ], + [ + "gene_synonym", + "b4015" + ], + [ + "gene_synonym", + "icl" + ] + ], + "dna_sequence": "ATGAAAACCCGTACACAACAAATTGAAGAATTACAGAAAGAGTGGACTCAACCGCGTTGGGAAGGCATTACTCGCCCATACAGTGCGGAAGATGTGGTGAAATTACGCGGTTCAGTCAATCCTGAATGCACGCTGGCGCAACTGGGCGCAGCGAAAATGTGGCGTCTGCTGCACGGTGAGTCGAAAAAAGGCTACATCAACAGCCTCGGCGCACTGACTGGCGGTCAGGCGCTGCAACAGGCGAAAGCGGGTATTGAAGCAGTCTATCTGTCGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCCGATCGTTGCCGATGCGGAAGCCGGTTTTGGCGGTGTCCTGAATGCCTTTGAACTGATGAAAGCGATGATTGAAGCCGGTGCAGCGGCAGTTCACTTCGAAGATCAGCTGGCGTCAGTGAAGAAATGCGGTCACATGGGCGGCAAAGTTTTAGTGCCAACTCAGGAAGCTATTCAGAAACTGGTCGCGGCGCGTCTGGCAGCTGACGTGACGGGCGTTCCAACCCTGCTGGTTGCCCGTACCGATGCTGATGCGGCGGATCTGATCACCTCCGATTGCGACCCGTATGACAGCGAATTTATTACCGGCGAGCGTACCAGTGAAGGCTTCTTCCGTACTCATGCGGGCATTGAGCAAGCGATCAGCCGTGGCCTGGCGTATGCGCCATATGCTGACCTGGTCTGGTGTGAAACCTCCACGCCGGATCTGGAACTGGCGCGTCGCTTTGCACAAGCTATCCACGCGAAATATCCGGGCAAACTGCTGGCTTATAACTGCTCGCCGTCGTTCAACTGGCAGAAAAACCTCGACGACAAAACTATTGCCAGCTTCCAGCAGCAGCTGTCGGATATGGGCTACAAGTTCCAGTTCATCACCCTGGCAGGTATCCACAGCATGTGGTTCAACATGTTTGACCTGGCAAACGCCTATGCCCAGGGCGAGGGTATGAAGCACTACGTTGAGAAAGTGCAGCAGCCGGAATTTGCCGCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAA", + "dna_sequence_length": 1305, + "functions": [ + "isocitrate lyase" + ], + "id": "CDS_3930", + "location": [ + [ + "NC_000913", + 4217109, + "+", + 1305 + ] + ], + "md5": "34b2396c510dd38d708e56c514d11e9e", + "parent_gene": "", + "protein_md5": "f995a4b2b1deaa2b2ef3164261dcedc9", + "protein_translation": "MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVTGVPTLLVARTDADAADLITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGTSSVTALTGSTEESQF", + "protein_translation_length": 434, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013131" + ], + [ + "gene_synonym", + "ECK4008" + ], + [ + "gene_synonym", + "EcoGene:EG10026" + ], + [ + "gene_synonym", + "GI:16131842" + ], + [ + "gene_synonym", + "GeneID:944797" + ], + [ + "gene_synonym", + "JW3976" + ], + [ + "gene_synonym", + "NP_418440.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11071" + ], + [ + "gene_synonym", + "aceK" + ], + [ + "gene_synonym", + "b4016" + ] + ], + "dna_sequence": "ATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCGGCATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAAGCCGTGACATCCATTACATTATTCGCCATCTGACGGAAACGCTGGGGACAGACAACCTCGCGGAAAGTCATTTACAGGTGGCGAACGAACTGTTTTACCGCAATAAAGCCGCCTGGCTGGTAGGCAAACTGATCACACCTTCCGGCACATTGCCATTTTTGCTGCCGATCCACCAGACGGACGACGGCGAGTTATTTATTGATACCTGCCTGACGACGACCGCCGAAGCGAGCATTGTTTTTGGCTTTGCGCGTTCTTATTTTATGGTTTATGCGCCGCTGCCCGCAGCGCTGGTCGAGTGGCTACGGGAAATTCTGCCAGGTAAAACCACCGCTGAATTGTATATGGCTATCGGCTGCCAGAAGCACGCCAAAACCGAAAGCTACCGCGAATATCTCGTTTATCTACAGGGCTGTAATGAGCAGTTCATTGAAGCGCCGGGTATTCGTGGAATGGTGATGTTGGTGTTTACGCTGCCGGGCTTTGATCGGGTATTCAAAGTCATCAAAGACAGGTTCGCGCCGCAGAAAGAGATGTCTGCCGCTCACGTTCGTGCCTGCTATCAACTGGTGAAAGAGCACGATCGCGTGGGCCGAATGGCGGACACCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACGGGCGTGTGGTTTTTTATGATTACGATGAAATTTGCTACATGACGGAAGTGAATTTCCGCGACATCCCGCCGCCGCGCTATCCGGAAGACGAACTTGCCAGCGAACCGTGGTACAGCGTCTCGCCGGGCGATGTTTTCCCGGAAGAGTTTCGCCACTGGCTATGCGCCGACCCGCGTATTGGTCCGCTGTTTGAAGAGATGCACGCCGACCTGTTCCGCGCTGATTACTGGCGCGCACTACAAAACCGCATACGTGAAGGGCATGTGGAAGATGTTTATGCGTATCGGCGCAGGCAAAGATTTAGCGTACGGTATGGGGAGATGCTTTTTTGA", + "dna_sequence_length": 1737, + "functions": [ + "isocitrate dehydrogenase kinase/phosphatase" + ], + "id": "CDS_3931", + "location": [ + [ + "NC_000913", + 4218596, + "+", + 1737 + ] + ], + "md5": "2e2ffcc032e4ddd9aa549f5301f44fe8", + "parent_gene": "", + "protein_md5": "c4bb6aec9b60aa072c62804bbd137730", + "protein_translation": "MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRRQRFSVRYGEMLF", + "protein_translation_length": 578, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013133" + ], + [ + "gene_synonym", + "ECK4009" + ], + [ + "gene_synonym", + "EcoGene:EG11208" + ], + [ + "gene_synonym", + "GI:16131843" + ], + [ + "gene_synonym", + "GeneID:944933" + ], + [ + "gene_synonym", + "JW3977" + ], + [ + "gene_synonym", + "NP_418441.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23325" + ], + [ + "gene_synonym", + "arpA" + ], + [ + "gene_synonym", + "b4017" + ], + [ + "gene_synonym", + "yjaC" + ] + ], + "dna_sequence": "ATGATTACTCGTATTCCTCGTAGTTCTTTCTCTGCAAATATTAATAATACAGCCCAGACAAATGAACACCAAACCCTGAGTGAATTGTTTTATAAAGAACTCGAGGATAAATTTTCTGGCAAGGAGCTGGCGACGCCTCTATTAAAAAGCTTCTCAGAGAACTGTAGACAAAATGGTCGTCATATCTTTAGCAACAAGGATTTTGTCATTAAATTTTCCACGTCCGTCTTACAAGCTGATAAGAAAGAAATTACGATAATTAATAAAAACGAAAACACGACACTTACTCAAACCATTGCCCCAATATTTGAAAAATACCTAATGGAAATTTTACCTCAACGCTCAGACACTCTTGATAAACAAGAATTAAACCTAAAATCAGATAGAAAAGAAAAAGAATTCCCAAGAATTAAACTTAATGGTCAATGTTATTTTCCGGGGCGACCCCAAAACCGTATAGTATGCCGACACATTGCTGCACAATATATTAATGATATTTATCAGAATGTTGATTACAAACCCCATCAAGATGATTACTCTTCAGCTGAAAAATTTCTCACGCACTTCAACAAAAAATGCAAAAACCAGACTTTGGCGTTGGTTTCCAGCCGTCCTGAGGGGCGTTGCGTTGCTGCCTGCGGTGATTTCGGGCTAGTTATGAAAGCATATTTTGACAAGATGGAATCAAATGGCATCAGTGTTATGGCAGCCATATTACTGGTGGATAACCATGCTTTGACGGTCCGGCTAAGAATAAAGAACACAACTGAAGGATGTACCCATTACGTGGTTTCGGTTTATGATCCTAATGTAACTAACGATAAAATAAGAATTATGAGCGAAAGCAAAGAGAATATTAAACACTATTCTCTGATGGATTTTATGAATGTAGATTATAGCCTCCTGAAATGGTCAAATGATCATGTTATTAATCAATCTGTTGCAATAATTCCAGCACTTCCGAAAGAACAGCTATTGATGTTAAAAGGATCTGTGGATGAAATAACCCCTCCATTATCACCTGCAACGATGAATTTGCTAATGGCAATTGGTCAGAATCACCAACTTACGCAACTGATGATTCAACTCCAGAAAATGCCAGAACTACATAGAACAGAAATGTTGACTGCCTATAATAGTATTAACCTGCCAGGTTTATATTTGGCTATAAATTATGGTAATGCGGATATCGTTGAGACTATTTTCAATTCATTGTCAGAAACAGGATATGAAGGATTACTCTCGAAAAAAAATCTCATGCATATTCTGGAGGCAAAAGATAAAAATGGTTTTTCTGGATTATTTTTAGCGATATCACGTAAGGATAAAAATGTTGTAACCTCGATTCTGAACGCCTTACCTAAACTGGCCGCAACACATCATTTAGATAACGAACAAGTGTATAAATTCCTGAGTGCCAAAAATAGAACGTCCAGCCATGTTTTATACCATGTTATGGCGAATGGTGATGCCGACATGCTGAAAATTGTTTTGAACGCGTTACCTTTGTTAATTCGCACATGTCATTTGACTAAAGAACAGGTACTCGATCTCCTGAAGGCAAAGGATTTTTATGGTTGCCCAGGACTATATCTGGCGATGCAAAATGGACATAGCGATATCGTGAAAGTTATTCTTGAAGCATTGCCCAGCCTAGCCCAGGAAATTAACATTTCAGCTTCCGATATTGTAGATCTTCTGACCGCTAAAAGTCTTGCGCGCGACACGGGTTTGTTTATGGCCATGCAGCGCGGACACATGAACGTTATTAATACTATTTTTAACGCATTACCCACTCTGTTTAATACGTTTAAATTCGATAAAAAAAATATGAAGCCCCTCCTCCTGGCAAATAATTCTAATGAATATCCCGGTTTGTTTTCAGCGATACAGCATAAACAACAAAATGTTGTAGAGACGGTTTATCTTGCTTTATCTGACCATGCACGCCTGTTTGGATTTACCGCTGAAGATATTATGGATTTTTGGCAACACAAAGCCCCACAAAAATACTCTGCCTTTGAGTTGGCTTTTGAATTTGGTCACCGGGTTATTGCTGAATTAATCCTTAATACATTAAATAAGATGGCTGAAAGCTTTGGCTTTACGGATAACCCTCGATACATTGCGGAGAAAAATTATATGGAAGCTTTACTCAAAAAAGCATCTCCCCATACCGTACGCTAA", + "dna_sequence_length": 2187, + "functions": [ + "ankyrin repeat protein" + ], + "id": "CDS_3932", + "location": [ + [ + "NC_000913", + 4222487, + "-", + 2187 + ] + ], + "md5": "0480880ce9b96ad5dbd588fa20f4ffde", + "parent_gene": "", + "protein_md5": "aa9279085f8fa32ef1430017e4d9f489", + "protein_translation": "MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR", + "protein_translation_length": 728, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013136" + ], + [ + "gene_synonym", + "ECK4010" + ], + [ + "gene_synonym", + "EcoGene:EG10491" + ], + [ + "gene_synonym", + "GI:90111675" + ], + [ + "gene_synonym", + "GeneID:948524" + ], + [ + "gene_synonym", + "JW3978" + ], + [ + "gene_synonym", + "NP_418442.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16528" + ], + [ + "gene_synonym", + "b4018" + ], + [ + "gene_synonym", + "iclR" + ] + ], + "dna_sequence": "ATGGTCGCACCCATTCCCGCGAAACGCGGCAGAAAACCCGCCGTTGCCACCGCACCAGCGACTGGACAGGTTCAGTCTTTAACGCGTGGCCTGAAATTACTGGAGTGGATTGCCGAATCCAATGGCAGTGTGGCACTCACGGAACTGGCGCAACAAGCCGGGTTACCCAATTCCACGACCCACCGCCTGCTAACCACGATGCAACAGCAGGGTTTCGTGCGTCAGGTTGGCGAACTGGGACATTGGGCAATCGGCGCACATGCCTTTATGGTCGGCAGCAGCTTTCTCCAGAGCCGTAATTTGTTAGCGATTGTTCACCCTATCCTGCGCAATCTAATGGAAGAGTCTGGCGAAACGGTCAATATGGCGGTGCTTGATCAAAGCGATCACGAAGCGATTATTATCGACCAGGTACAGTGTACGCATCTGATGCGAATGTCCGCGCCTATCGGCGGTAAATTGCCGATGCACGCTTCCGGTGCGGGTAAAGCCTTTTTAGCCCAACTGAGCGAAGAACAGGTGACGAAGCTGCTGCACCGCAAAGGGTTACATGCCTATACCCACGCAACGCTGGTGTCTCCTGTGCATTTAAAAGAAGATCTCGCCCAAACGCGCAAACGGGGTTATTCATTTGACGATGAGGAACATGCACTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACCGTTTGCCGCAATTTCTATTTCCGGACCGATTTCACGTATTACCGATGACCGCGTGACCGAGTTTGGCGCGATGGTGATTAAAGCGGCGAAGGAAGTGACGCTGGCGTACGGTGGAATGCGCTGA", + "dna_sequence_length": 825, + "functions": [ + "transcriptional repressor" + ], + "id": "CDS_3933", + "location": [ + [ + "NC_000913", + 4223628, + "-", + 825 + ] + ], + "md5": "e285c7d31c4dcc1f13ffab7a7fc73b9a", + "parent_gene": "", + "protein_md5": "1717022bae5763ebfa317e2ebce04a07", + "protein_translation": "MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013140" + ], + [ + "gene_synonym", + "ECK4011" + ], + [ + "gene_synonym", + "EcoGene:EG10587" + ], + [ + "gene_synonym", + "GI:16131845" + ], + [ + "gene_synonym", + "GeneID:948522" + ], + [ + "gene_synonym", + "JW3979" + ], + [ + "gene_synonym", + "NP_418443.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13009" + ], + [ + "gene_synonym", + "b4019" + ], + [ + "gene_synonym", + "metH" + ] + ], + "dna_sequence": "GTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCCTACTTTGAAGCGGGCGCGGATATCATCGAAACCAACACCTTCAACTCCACGACCATTGCGATGGCGGATTACCAGATGGAATCCCTGTCGGCGGAAATCAACTTTGCGGCGGCGAAACTGGCGCGAGCTTGTGCTGACGAGTGGACCGCGCGCACGCCAGAGAAACCGCGCTACGTTGCCGGTGTTCTCGGCCCGACCAACCGCACGGCGTCTATTTCTCCGGACGTCAACGATCCGGCATTTCGTAATATCACTTTTGACGGGCTGGTGGCGGCTTATCGAGAGTCCACCAAAGCGCTGGTGGAAGGTGGCGCGGATCTGATCCTGATTGAAACCGTTTTCGACACCCTTAACGCCAAAGCGGCGGTATTTGCGGTGAAAACGGAGTTTGAAGCGCTGGGCGTTGAGCTGCCGATTATGATCTCCGGCACCATCACCGACGCCTCCGGGCGCACGCTCTCCGGGCAGACCACCGAAGCATTTTACAACTCATTGCGCCACGCCGAAGCTCTGACCTTTGGCCTGAACTGTGCGCTGGGGCCCGATGAACTGCGCCAGTACGTGCAGGAGCTGTCACGGATTGCGGAATGCTACGTCACCGCGCACCCGAACGCCGGGCTACCCAACGCCTTTGGTGAGTACGATCTCGACGCCGACACGATGGCAAAACAGATACGTGAATGGGCGCAAGCGGGTTTTCTCAATATCGTCGGCGGCTGCTGTGGCACCACGCCACAACATATTGCAGCGATGAGTCGTGCAGTAGAAGGATTAGCGCCGCGCAAACTGCCGGAAATTCCCGTAGCCTGCCGTTTGTCCGGCCTGGAGCCGCTGAACATTGGCGAAGATAGCCTGTTTGTGAACGTGGGTGAACGCACCAACGTCACCGGTTCCGCTAAGTTCAAGCGCCTGATCAAAGAAGAGAAATACAGCGAGGCGCTGGATGTCGCGCGTCAACAGGTGGAAAACGGCGCGCAGATTATCGATATCAACATGGATGAAGGGATGCTCGATGCCGAAGCGGCGATGGTGCGTTTTCTCAATCTGATTGCCGGTGAACCGGATATCGCTCGCGTGCCGATTATGATCGACTCCTCAAAATGGGACGTCATTGAAAAAGGTCTGAAGTGTATCCAGGGCAAAGGCATTGTTAACTCTATCTCGATGAAAGAGGGCGTCGATGCCTTTATCCATCACGCGAAATTGTTGCGTCGCTACGGTGCGGCAGTGGTGGTAATGGCCTTTGACGAACAGGGACAGGCCGATACTCGCGCACGGAAAATCGAGATTTGCCGTCGGGCGTACAAAATCCTCACCGAAGAGGTTGGCTTCCCGCCAGAAGATATCATCTTCGACCCAAACATCTTCGCGGTCGCAACTGGCATTGAAGAGCACAACAACTACGCGCAGGACTTTATCGGCGCGTGTGAAGACATCAAACGCGAACTGCCGCACGCGCTGATTTCCGGCGGCGTATCTAACGTTTCTTTCTCGTTCCGTGGCAACGATCCGGTGCGCGAAGCCATTCACGCAGTGTTCCTCTACTACGCTATTCGCAATGGCATGGATATGGGGATCGTCAACGCCGGGCAACTGGCGATTTACGACGACCTACCCGCTGAACTGCGCGACGCGGTGGAAGATGTGATTCTTAATCGTCGCGACGATGGCACCGAGCGTTTACTGGAGCTTGCCGAGAAATATCGCGGCAGCAAAACCGACGACACCGCCAACGCCCAGCAGGCGGAGTGGCGCTCGTGGGAAGTGAATAAACGTCTGGAATACTCGCTGGTCAAAGGCATTACCGAGTTTATCGAGCAGGATACCGAAGAAGCCCGCCAGCAGGCTACGCGCCCGATTGAAGTGATTGAAGGCCCGTTGATGGACGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACATCGGTAAAAATATCGTTGGTGTGGTGCTGCAATGTAACAACTACGAAATTGTCGATCTCGGCGTTATGGTGCCTGCGGAAAAAATTCTCCGTACCGCTAAAGAAGTGAATGCTGATCTGATTGGCCTTTCGGGGCTTATCACGCCGTCGCTGGACGAGATGGTTAACGTGGCGAAAGAGATGGAGCGTCAGGGCTTCACTATTCCGTTACTGATTGGCGGCGCGACGACCTCAAAAGCGCACACGGCGGTGAAAATCGAGCAGAACTACAGCGGCCCGACGGTGTATGTGCAGAATGCCTCGCGTACCGTTGGTGTGGTGGCGGCGCTGCTTTCCGATACCCAGCGTGATGATTTTGTCGCTCGTACCCGCAAGGAGTACGAAACCGTACGTATTCAGCACGGGCGCAAGAAACCGCGCACACCACCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGCGCACCGTCTCGGCGTGCAGGAAGTCGAAGCCAGCATCGAAACGCTGCGTAATTACATCGACTGGACACCGTTCTTTATGACCTGGTCGCTGGCCGGGAAGTATCCGCGCATTCTGGAAGATGAAGTGGTGGGCGTTGAGGCGCAGCGGCTGTTTAAAGACGCCAACGACATGCTGGATAAATTAAGCGCCGAGAAAACGCTGAATCCGCGTGGCGTGGTGGGCCTGTTCCCGGCAAACCGTGTGGGCGATGACATTGAAATCTACCGTGACGAAACGCGTACCCATGTGATCAACGTCAGCCACCATCTGCGTCAACAGACCGAAAAAACAGGCTTCGCTAACTACTGTCTCGCTGACTTCGTTGCGCCGAAGCTTTCTGGTAAAGCAGATTACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGA", + "dna_sequence_length": 3684, + "functions": [ + "homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent" + ], + "id": "CDS_3934", + "location": [ + [ + "NC_000913", + 4223828, + "+", + 3684 + ] + ], + "md5": "11413e6d94e7952cb82ec6b0c1f2f341", + "parent_gene": "", + "protein_md5": "aa3986a1e1c4cddc5ebb93ae1de90667", + "protein_translation": "MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARRKGMSVTEVERWLAPNLGYDAD", + "protein_translation_length": 1227, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013143" + ], + [ + "gene_synonym", + "ECK4012" + ], + [ + "gene_synonym", + "EcoGene:EG11919" + ], + [ + "gene_synonym", + "GI:16131846" + ], + [ + "gene_synonym", + "GeneID:948521" + ], + [ + "gene_synonym", + "JW3980" + ], + [ + "gene_synonym", + "NP_418444.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF43" + ], + [ + "gene_synonym", + "b4020" + ], + [ + "gene_synonym", + "yjbB" + ] + ], + "dna_sequence": "GTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGGGGACTCATATTGTTCGAACCGGCGTAATGCGCGTCTTCGGCGCGCGTTTGCGTACTGTCCTTAGCCGGAGCGTCGAAAAAAAGCCGCTCGCCTTTTGCGCGGGGATCGGCGTTACCGCACTGGTACAGAGCAGTAATGCCACCACCATGCTGGTGACCTCGTTTGTCGCTCAGGATCTGGTAGCCCTCGCACCGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGCGCTGGGTAGTCTGCTGTTTAAGCTGGTGGGTAGCCTGATTATCCTGCCGTTTGTCCATTTGCTGGCAGAGACAATGGGGAAGTTGTCATTGCCAAAAGCGGAACTGGTGATCTATTTCCACGTCTTCTACAACCTTGTACGTTGCCTGGTCATGCTGCCATTTGTTGACCCGATGGCACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGCGAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGGAAGAGTCGCGCCGCTGGGCAGAGATCATCGAAATGTCGCTCAACCTTGAACAGGCCTCCGATATCGTCGAGCGCATGGGCAGCGAAATTGCTGACAAATCACTGGCAGCACGGCGGGCATTTTCGCTTGATGGGTTGAAGGAACTGGATGCGCTCTATGAGCAATTGCTCAGTAATTTAAAGCTGGCAATGTCGGTGTTCTTCTCTGGCGATGTCACCAGCGCTCGTCGTTTGCGTCGCAGCAAACATCGTTTTCGCATTCTTAATCGCCGCTATTCCCACGCCCACGTCGATCGCCTGCATCAGCAAAACGTGCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAA", + "dna_sequence_length": 1632, + "functions": [ + "putative Na+/Pi-cotransporter" + ], + "id": "CDS_3935", + "location": [ + [ + "NC_000913", + 4227731, + "+", + 1632 + ] + ], + "md5": "b108d05fea141fbe616ab6199c2186ca", + "parent_gene": "", + "protein_md5": "d93eb74b3c02235c5774a101f59ad24b", + "protein_translation": "MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVIYFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALANAARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEELAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRDEY", + "protein_translation_length": 543, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013146" + ], + [ + "gene_synonym", + "ECK4013" + ], + [ + "gene_synonym", + "EcoGene:EG11920" + ], + [ + "gene_synonym", + "GI:16131847" + ], + [ + "gene_synonym", + "GeneID:948520" + ], + [ + "gene_synonym", + "JW3981" + ], + [ + "gene_synonym", + "NP_418445.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7C6" + ], + [ + "gene_synonym", + "b4021" + ], + [ + "gene_synonym", + "pepE" + ] + ], + "dna_sequence": "ATGGAACTGCTTTTATTGAGTAACTCGACGCTGCCGGGTAAAGCCTGGCTGGAACATGCACTGCCGCTAATTGCTGAACAGTTGCAGGGTCGCCGCTCAGCGGTGTTTATCCCTTTCGCTGGCGTAACGCAGACCTGGGATGATTACACAGCGAAAACGGCTGCGGTTCTCGCTCCGCTGGGTGTTTCTGTCACCGGTATTCATAGCGTTGTCGATCCCGTTGCCGCGATTGAAAATGCTGAGATCGTGATTGTCGGCGGCGGGAATACTTTCCAGTTGCTGAAACAGTGCCGCGAGCGCGGGCTGCTGGCACCAATTACTGACGTGGTTAAACGTGGCGCTCTGTATATTGGCTGGAGCGCAGGCGCTAACCTTGCTTGCCCAACTATTCGTACCACCAACGATATGCCGATTGTCGATCCGCAAGGTTTCGATGCGCTAAATCTGTTCCCGCTGCAAATCAACCCGCACTTCACCAACGCGCTGCCGGAAGGCCATAAAGGTGAAACCCGTGAGCAGCGTATTCGCGAACTGCTGGTCGTCGCGCCAGAACTGACGATTATTGGTCTACCGGAAGGTAACTGGATCACAGTGAGTAAAGGTCACGCTACGCTGGGTGGCCCGAACACCACTTATGTGTTTAAGGCTGGTGAAGAAGCGGTTCCGCTGGAAGCTGGTCACCGTTTTTAA", + "dna_sequence_length": 690, + "functions": [ + "peptidase E, alpha-aspartyl dipeptidase" + ], + "id": "CDS_3936", + "location": [ + [ + "NC_000913", + 4230142, + "-", + 690 + ] + ], + "md5": "41b02ac750687c5b61a706c45e1617be", + "parent_gene": "", + "protein_md5": "2ad1e07b049baa236cacec426fe168ce", + "protein_translation": "MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013150" + ], + [ + "gene_synonym", + "ECK4014" + ], + [ + "gene_synonym", + "EcoGene:EG11921" + ], + [ + "gene_synonym", + "GI:16131848" + ], + [ + "gene_synonym", + "GeneID:948519" + ], + [ + "gene_synonym", + "JW3982" + ], + [ + "gene_synonym", + "NP_418446.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32684" + ], + [ + "gene_synonym", + "b4022" + ], + [ + "gene_synonym", + "rluF" + ], + [ + "gene_synonym", + "yjbC" + ] + ], + "dna_sequence": "ATGCTGCCCGACTCATCAGTCCGTTTAAATAAATACATCAGCGAAAGCGGAATTTGCTCACGCCGCGAAGCGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCGAGCGCGATAACATTGTCGATTTCGTTAACCACAGCAAACGCGTGTTCCCGATTGGCCGCCTGGATAAAGACTCCCAGGGGCTGATTTTCCTCACCAATCACGGCGATCTGGTGAATAAGATCCTGCGTGCTGGCAATGATCATGAGAAAGAGTATCTGGTGACGGTCGATAAACCGATTACCGAGGAGTTTATTCGCGGCATGAGTGCGGGGGTGCCAATCCTCGGGACAGTGACCAAAAAGTGCAAAGTTAAAAAAGAAGCGCCGTTTGTCTTCCGCATTACCCTGGTGCAGGGGCTGAACCGTCAGATCCGGCGCATGTGCGAGCATTTCGGCTATGAAGTGAAAAAGCTGGAACGCACGCGCATCATGAACGTTAGCTTAAGCGGCATTCCGCTGGGGGAATGGCGCGATTTAACCGACGATGAGTTAATCGACCTCTTTAAGCTCATTGAAAATTCCTCTTCCGAGGTAAAACCTAAAGCGAAGGCCAAACCGAAAACAGCGGGCATCAAACGTCCAGTCGTTAAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGA", + "dna_sequence_length": 873, + "functions": [ + "23S rRNA pseudouridine(2604) synthase" + ], + "id": "CDS_3937", + "location": [ + [ + "NC_000913", + 4230354, + "+", + 873 + ] + ], + "md5": "5bfbed0780696a71d901a04cc860eab4", + "parent_gene": "", + "protein_md5": "18085dc49132ac66c5998c97ebbf1595", + "protein_translation": "MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013153" + ], + [ + "gene_synonym", + "ECK4015" + ], + [ + "gene_synonym", + "EcoGene:EG11922" + ], + [ + "gene_synonym", + "GI:16131849" + ], + [ + "gene_synonym", + "GeneID:948518" + ], + [ + "gene_synonym", + "JW3983" + ], + [ + "gene_synonym", + "NP_418447.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32685" + ], + [ + "gene_synonym", + "b4023" + ], + [ + "gene_synonym", + "yjbD" + ] + ], + "dna_sequence": "ATGGCACTCCCCCGTATTACCCAAAAAGAGATGACTGAACGCGAGCAGCGTGAACTTAAAACACTGCTGGATCGGGCGCGGATTGCGCATGGTCGCGTATTGACCAACTCCGAAACCAACAGCATTAAGAAAGATTACATCGATAAATTAATGGTTGAGCGTGAGGCTGAAGCGAAAAAAGCCCGCCAGTTGAAGAAAAAGCAGGCTTATAAACCGGATCCTGAAGCGTCATTTAGCTGGTCAGCAAATACGTCGACGCGCGGCAGGCGCTAA", + "dna_sequence_length": 273, + "functions": [ + "DUF3811 family protein" + ], + "id": "CDS_3938", + "location": [ + [ + "NC_000913", + 4231631, + "-", + 273 + ] + ], + "md5": "4c00af5ea47167f72ec6dc93223af4f2", + "parent_gene": "", + "protein_md5": "86e49383df817859f3cd644300bf75d7", + "protein_translation": "MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKDYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013156" + ], + [ + "gene_synonym", + "ECK4016" + ], + [ + "gene_synonym", + "EcoGene:EG10550" + ], + [ + "gene_synonym", + "GI:16131850" + ], + [ + "gene_synonym", + "GeneID:948531" + ], + [ + "gene_synonym", + "JW3984" + ], + [ + "gene_synonym", + "NP_418448.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08660" + ], + [ + "gene_synonym", + "apk" + ], + [ + "gene_synonym", + "b4024" + ], + [ + "gene_synonym", + "lysC" + ] + ], + "dna_sequence": "ATGTCTGAAATTGTTGTCTCCAAATTTGGCGGTACCAGCGTAGCTGATTTTGACGCCATGAACCGCAGCGCTGATATTGTGCTTTCTGATGCCAACGTGCGTTTAGTTGTCCTCTCGGCTTCTGCTGGTATCACTAATCTGCTGGTCGCTTTAGCTGAAGGACTGGAACCTGGCGAGCGATTCGAAAAACTCGACGCTATCCGCAACATCCAGTTTGCCATTCTGGAACGTCTGCGTTACCCGAACGTTATCCGTGAAGAGATTGAACGTCTGCTGGAGAACATTACTGTTCTGGCAGAAGCGGCGGCGCTGGCAACGTCTCCGGCGCTGACAGATGAGCTGGTCAGCCACGGCGAGCTGATGTCGACCCTGCTGTTTGTTGAGATCCTGCGCGAACGCGATGTTCAGGCACAGTGGTTTGATGTACGTAAAGTGATGCGTACCAACGACCGATTTGGTCGTGCAGAGCCAGATATAGCCGCGCTGGCGGAACTGGCCGCGCTGCAGCTGCTCCCACGTCTCAATGAAGGCTTAGTGATCACCCAGGGATTTATCGGTAGCGAAAATAAAGGTCGTACAACGACGCTTGGCCGTGGAGGCAGCGATTATACGGCAGCCTTGCTGGCGGAGGCTTTACACGCATCTCGTGTTGATATCTGGACCGACGTCCCGGGCATCTACACCACCGATCCACGCGTAGTTTCCGCAGCAAAACGCATTGATGAAATCGCGTTTGCCGAAGCGGCAGAGATGGCAACTTTTGGTGCAAAAGTACTGCATCCGGCAACGTTGCTACCCGCAGTACGCAGCGATATCCCGGTCTTTGTCGGCTCCAGCAAAGACCCACGCGCAGGTGGTACGCTGGTGTGCAATAAAACTGAAAATCCGCCGCTGTTCCGCGCTCTGGCGCTTCGTCGCAATCAGACTCTGCTCACTTTGCACAGCCTGAATATGCTGCATTCTCGCGGTTTCCTCGCGGAAGTTTTCGGCATCCTCGCGCGGCATAATATTTCGGTAGACTTAATCACCACGTCAGAAGTGAGCGTGGCATTAACCCTTGATACCACCGGTTCAACCTCCACTGGCGATACGTTGCTGACGCAATCTCTGCTGATGGAGCTTTCCGCACTGTGTCGGGTGGAGGTGGAAGAAGGTCTGGCGCTGGTCGCGTTGATTGGCAATGACCTGTCAAAAGCCTGCGGCGTTGGCAAAGAGGTATTCGGCGTACTGGAACCGTTCAACATTCGCATGATTTGTTATGGCGCATCCAGCCATAACCTGTGCTTCCTGGTGCCCGGCGAAGATGCCGAGCAGGTGGTGCAAAAACTGCATAGTAATTTGTTTGAGTAA", + "dna_sequence_length": 1350, + "functions": [ + "lysine-sensitive aspartokinase 3" + ], + "id": "CDS_3939", + "location": [ + [ + "NC_000913", + 4233233, + "-", + 1350 + ] + ], + "md5": "9ce679e9cff317b4f3577aebeb1215de", + "parent_gene": "", + "protein_md5": "10ae47177bcf8044fdf2f4ed94c3bcbc", + "protein_translation": "MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDIAALAELAALQLLPRLNEGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE", + "protein_translation_length": 449, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013163" + ], + [ + "gene_synonym", + "ECK4017" + ], + [ + "gene_synonym", + "EcoGene:EG10702" + ], + [ + "gene_synonym", + "GI:16131851" + ], + [ + "gene_synonym", + "GeneID:948535" + ], + [ + "gene_synonym", + "JW3985" + ], + [ + "gene_synonym", + "NP_418449.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T1" + ], + [ + "gene_synonym", + "b4025" + ], + [ + "gene_synonym", + "pgi" + ] + ], + "dna_sequence": "ATGAAAAACATCAATCCAACGCAGACCGCTGCCTGGCAGGCACTACAGAAACACTTCGATGAAATGAAAGACGTTACGATCGCCGATCTTTTTGCTAAAGACGGCGATCGTTTTTCTAAGTTCTCCGCAACCTTCGACGATCAGATGCTGGTGGATTACTCCAAAAACCGCATCACTGAAGAGACGCTGGCGAAATTACAGGATCTGGCGAAAGAGTGCGATCTGGCGGGCGCGATTAAGTCGATGTTCTCTGGCGAGAAGATCAACCGCACTGAAAACCGCGCCGTGCTGCACGTAGCGCTGCGTAACCGTAGCAATACCCCGATTTTGGTTGATGGCAAAGACGTAATGCCGGAAGTCAACGCGGTGCTGGAGAAGATGAAAACCTTCTCAGAAGCGATTATTTCCGGTGAGTGGAAAGGTTATACCGGCAAAGCAATCACTGACGTAGTGAACATCGGGATCGGCGGTTCTGACCTCGGCCCATACATGGTGACCGAAGCTCTGCGTCCGTACAAAAACCACCTGAACATGCACTTTGTTTCTAACGTCGATGGGACTCACATCGCGGAAGTGCTGAAAAAAGTAAACCCGGAAACCACGCTGTTCTTGGTAGCATCTAAAACCTTCACCACTCAGGAAACTATGACCAACGCCCATAGCGCGCGTGACTGGTTCCTGAAAGCGGCAGGTGATGAAAAACACGTTGCAAAACACTTTGCGGCGCTTTCCACCAATGCCAAAGCCGTTGGCGAGTTTGGTATTGATACTGCCAACATGTTCGAGTTCTGGGACTGGGTTGGCGGCCGTTACTCTTTGTGGTCAGCGATTGGCCTGTCGATTGTTCTCTCCATCGGCTTTGATAACTTCGTTGAACTGCTTTCCGGCGCACACGCGATGGACAAGCATTTCTCCACCACGCCTGCCGAGAAAAACCTGCCTGTACTGCTGGCGCTGATTGGCATCTGGTACAACAATTTCTTTGGTGCGGAAACTGAAGCGATTCTGCCGTATGACCAGTATATGCACCGTTTCGCGGCGTACTTCCAGCAGGGCAATATGGAGTCCAACGGTAAGTATGTTGACCGTAACGGTAACGTTGTGGATTACCAGACTGGCCCGATTATCTGGGGTGAACCAGGCACTAACGGTCAGCACGCGTTCTACCAGCTGATCCACCAGGGAACCAAAATGGTACCGTGCGATTTCATCGCTCCGGCTATCACCCATAACCCGCTCTCTGATCATCACCAGAAACTGCTGTCTAACTTCTTCGCCCAGACCGAAGCGCTGGCGTTTGGTAAATCCCGCGAAGTGGTTGAGCAGGAATATCGTGATCAGGGTAAAGATCCGGCAACGCTTGACTACGTGGTGCCGTTCAAAGTATTCGAAGGTAACCGCCCGACCAACTCCATCCTGCTGCGTGAAATCACTCCGTTCAGCCTGGGTGCGTTGATTGCGCTGTATGAGCACAAAATCTTTACTCAGGGCGTGATCCTGAACATCTTCACCTTCGACCAGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAA", + "dna_sequence_length": 1650, + "functions": [ + "glucosephosphate isomerase" + ], + "id": "CDS_3940", + "location": [ + [ + "NC_000913", + 4233758, + "+", + 1650 + ] + ], + "md5": "6f7f17a8e8a85d1c2cba3be1d5437157", + "parent_gene": "", + "protein_md5": "b27dd7db316ffeb6a91464fc033cd01c", + "protein_translation": "MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKDPATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQWGVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG", + "protein_translation_length": 549, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013168" + ], + [ + "gene_synonym", + "ECK4018" + ], + [ + "gene_synonym", + "EcoGene:EG11923" + ], + [ + "gene_synonym", + "GI:16131852" + ], + [ + "gene_synonym", + "GeneID:948534" + ], + [ + "gene_synonym", + "JW3986" + ], + [ + "gene_synonym", + "NP_418450.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF45" + ], + [ + "gene_synonym", + "b4026" + ], + [ + "gene_synonym", + "yjbE" + ] + ], + "dna_sequence": "ATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAA", + "dna_sequence_length": 243, + "functions": [ + "extracellular polysaccharide production threonine-rich protein" + ], + "id": "CDS_3941", + "location": [ + [ + "NC_000913", + 4235906, + "+", + 243 + ] + ], + "md5": "f9e2cdc261a7869c30898e873a300898", + "parent_gene": "", + "protein_md5": "ea8c0d748b8851e307dded14ffe3c860", + "protein_translation": "MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013172" + ], + [ + "gene_synonym", + "ECK4019" + ], + [ + "gene_synonym", + "EcoGene:EG11924" + ], + [ + "gene_synonym", + "GI:90111676" + ], + [ + "gene_synonym", + "GeneID:948533" + ], + [ + "gene_synonym", + "JW5711" + ], + [ + "gene_synonym", + "NP_418451.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32687" + ], + [ + "gene_synonym", + "b4027" + ], + [ + "gene_synonym", + "yjbF" + ] + ], + "dna_sequence": "GTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGATGATGATATTCAAAATATGCCCTACGCCAGCCAGTACATGCAGCTTAATGGCGGGCCGCAGTTATTTGTGGTGCTGGCCTTCGCTGAAGACGGACAACAAAAATGGGTCACTCAGGATCAGGCTACTCTCGTTACCCAACATGGCCGTCTGGTGAAGACTCTGCTCGGCGGCGACAACCTGATTGAAGTGAATAACCTTGCTGCCGACCCGCTGATTAAACCCGCACAAATCGTTGATGGCGCAAGCTGGACGCGCACGATGGGCTGGACCGAGTACCAGCAGGTACGCTACGCCACCGCACGCTCAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCACTCTCATCAAGGCGGCAAAACAATGA", + "dna_sequence_length": 639, + "functions": [ + "extracellular polysaccharide production lipoprotein" + ], + "id": "CDS_3942", + "location": [ + [ + "NC_000913", + 4236262, + "+", + 639 + ] + ], + "md5": "adeb3e322ecc478871ccdeb11c6c4a0f", + "parent_gene": "", + "protein_md5": "976dc26e99814a3392f2623aa6818400", + "protein_translation": "MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013174" + ], + [ + "gene_synonym", + "ECK4020" + ], + [ + "gene_synonym", + "EcoGene:EG11925" + ], + [ + "gene_synonym", + "GI:16131854" + ], + [ + "gene_synonym", + "GeneID:948526" + ], + [ + "gene_synonym", + "JW3988" + ], + [ + "gene_synonym", + "NP_418452.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32688" + ], + [ + "gene_synonym", + "b4028" + ], + [ + "gene_synonym", + "yjbG" + ] + ], + "dna_sequence": "ATGATTAAACAAACTATTGTCGCGTTGCTTTTGAGTGTGGGAGCGTCATCGGTCTTCGCGGCAGGAACCGTCAAGGTGTTCAGCAATGGCAGCAGTGAGGCCAAAACGCTAACGGGCGCAGAGCATTTAATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTGGCTTACTGGAACAAGCGTCACGTAGAGCCGATGCCCGGCAGCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAA", + "dna_sequence_length": 738, + "functions": [ + "extracellular polysaccharide export OMA protein" + ], + "id": "CDS_3943", + "location": [ + [ + "NC_000913", + 4236897, + "+", + 738 + ] + ], + "md5": "d2cf8d41ef12d1e872874af29da25224", + "parent_gene": "", + "protein_md5": "bf1144a36a9a230e5b4b6bbc941247f3", + "protein_translation": "MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013176" + ], + [ + "gene_synonym", + "ECK4021" + ], + [ + "gene_synonym", + "EcoGene:EG11926" + ], + [ + "gene_synonym", + "GI:16131855" + ], + [ + "gene_synonym", + "GeneID:948527" + ], + [ + "gene_synonym", + "JW3989" + ], + [ + "gene_synonym", + "NP_418453.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32689" + ], + [ + "gene_synonym", + "b4029" + ], + [ + "gene_synonym", + "yjbH" + ] + ], + "dna_sequence": "ATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACGGGGCTGTTTGATGCGGAATATCTTGTTGCCAGCAAAGCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCGGGATCTATCGACGGTAGCCAGATGTTCCACGGTCCTGCCTCACTGTTTGGCGGCGTGGAATACCAGACGCCCTGGCAACCGCTGCGCCTGAAACTGGAGTATGAAGGCAATAATTATCAGCAGGATTTTGCCGGGAAGCTGGAGCAAAAAAGTAAGTTTAACGTCGGTGCGATTTATCGCGTTACCGATTGGGCCGACGTTAACCTTAGCTATGAACGTGGCAACACCTTTATGTTTGGCGTTACGTTGCGCACCAACTTTAACGATCTGCGCCCGTCTTACAACGATAACGCCCGCCCGCAATATCAACCGCAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCAGTTAACGCTGTTGAAATACAATGCCGGACTTGCCGATCCACAGATCCAGGCGAAAGGCGATACGCTGTATGTTACCGGCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAACGACGCTGGCGCAAAAACGCGTCGAGCCAGTGGTTCCGCAGTCCACCGAGCAGGGCTGGTATATCGACAAATCACGCTTTGATTTCCATATCGATCCGGTGCTGAACCAGTCGGTCGGTGGCCCGGAAAACTTTTACATGTATCAGCTGGGCGTGATGGGAACGGCAGATTTGTGGCTGACGGACCATCTGCTGACCACCGGCAGCCTGTTTGCAAATCTTGCCAACAACTACGACAAGTTTAACTACACTAATCCTCCGCAGGACTCGCACTTACCGCGCGTGCGTACCCATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAACTACGTTAAACAGCGCGACTGGCGTAGTGCAAAAGATATGATGAAATTCACCGACTACAGCGTGAAAACCGGACATCTGACCGCCTACTGGACGCCATCTTTCGCTCAGGATGTGTTAGTTAAAGCCAGCGTCGGGCAGTATCTGGCAGGGGATAAAGGCGGCACGCTGGAGATCGCCAAACGCTTTGATAGCGGCGTGGTGGTGGGTGGCTATGCCACGATCACTAATGTTTCGAAAGAGGAGTACGGCGAAGGGGACTTCACCAAAGGCGTGTATGTCTCGGTACCGTTGGATCTCTTCTCGTCTGGCCCGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAA", + "dna_sequence_length": 2097, + "functions": [ + "DUF940 family extracellular polysaccharide protein" + ], + "id": "CDS_3944", + "location": [ + [ + "NC_000913", + 4237634, + "+", + 2097 + ] + ], + "md5": "49cde2fec3e577be2cad20a13181de9a", + "parent_gene": "", + "protein_md5": "8c86bd7f257f8cf998bf17dc8291f10b", + "protein_translation": "MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETTLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR", + "protein_translation_length": 698, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4428" + ], + [ + "gene_synonym", + "EcoGene:EG14459" + ], + [ + "gene_synonym", + "GI:145698339" + ], + [ + "gene_synonym", + "GeneID:5061528" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A628" + ], + [ + "gene_synonym", + "YP_001165332.1" + ], + [ + "gene_synonym", + "b4620" + ], + [ + "gene_synonym", + "yjbT" + ] + ], + "dna_sequence": "ATGAAACGTAACCTGATAAAGGTGGTAAAAATGAAGCCTTATTTTGCTGCTTTGATGTTATCAGTCTCTGTTCTTCCTGCTTATGCTGGTCCGCTCGGTACTGCTGATAAAGCCGACCTACCGCAAAGCAATGTCTCCAGCCCAATGATGGCCCAGTCGCTCAGGCAACCAGACCTGCAACCGATATCGACGGACAGGAAGACAGAATGTTTTCGCCTTTACACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAA", + "dna_sequence_length": 279, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_3945", + "location": [ + [ + "NC_000913", + 4240055, + "-", + 279 + ] + ], + "md5": "a6db2c3ee25b345f2138e692c7a46f8c", + "parent_gene": "", + "protein_md5": "fbb6498f0e2700d373910bd08ba7709a", + "protein_translation": "MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSNVSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013187" + ], + [ + "gene_synonym", + "ECK4022" + ], + [ + "gene_synonym", + "EcoGene:EG11209" + ], + [ + "gene_synonym", + "GI:16131856" + ], + [ + "gene_synonym", + "GeneID:948528" + ], + [ + "gene_synonym", + "JW3990" + ], + [ + "gene_synonym", + "NP_418454.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7C8" + ], + [ + "gene_synonym", + "b4030" + ], + [ + "gene_synonym", + "psiE" + ], + [ + "gene_synonym", + "yjbA" + ] + ], + "dna_sequence": "ATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTATTTCGAATTTATCGCGCTGATTGTGAAGTACTTTCAGTCCGGTTTTCACTTCCCGCTACGTTACTTTGTCTATATTGGGATCACCGCCATTGTGCGCTTGATCATCGTCGATCATAAATCGCCACTGGATGTGTTGATCTACTCGGCTGCGATCCTGTTACTGGTGATCACCCTGTGGCTGTGTAATTCGAAACGGCTGAAGCGGGAGTAA", + "dna_sequence_length": 411, + "functions": [ + "phosphate starvation inducible protein" + ], + "id": "CDS_3946", + "location": [ + [ + "NC_000913", + 4240325, + "+", + 411 + ] + ], + "md5": "879463eea83015b4928cff5961617cda", + "parent_gene": "", + "protein_md5": "60703ed43b255e006d148e32d78d30ea", + "protein_translation": "MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013189" + ], + [ + "gene_synonym", + "ECK4023" + ], + [ + "gene_synonym", + "EcoGene:EG11076" + ], + [ + "gene_synonym", + "GI:16131857" + ], + [ + "gene_synonym", + "GeneID:948529" + ], + [ + "gene_synonym", + "JW3991" + ], + [ + "gene_synonym", + "NP_418455.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGF4" + ], + [ + "gene_synonym", + "b4031" + ], + [ + "gene_synonym", + "xylE" + ] + ], + "dna_sequence": "ATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAGTCACTCAATACCGTCTTTGTTGCTCCACAAAACTTAAGTGAATCCGCTGCCAACTCCCTGTTAGGGTTTTGCGTGGCCAGCGCTCTGATTGGTTGCATCATCGGCGGTGCCCTCGGTGGTTATTGCAGTAACCGCTTCGGTCGTCGTGATTCACTTAAGATTGCTGCTGTCCTGTTTTTTATTTCTGGTGTAGGTTCTGCCTGGCCAGAACTTGGTTTTACCTCTATAAACCCGGACAACACTGTGCCTGTTTATCTGGCAGGTTATGTCCCGGAATTTGTTATTTATCGCATTATTGGCGGTATTGGCGTTGGTTTAGCCTCAATGCTCTCGCCAATGTATATTGCGGAACTGGCTCCAGCTCATATTCGCGGGAAACTGGTCTCTTTTAACCAGTTTGCGATTATTTTCGGGCAACTTTTAGTTTACTGCGTAAACTATTTTATTGCCCGTTCCGGTGATGCCAGCTGGCTGAATACTGACGGCTGGCGTTATATGTTTGCCTCGGAATGTATCCCTGCACTGCTGTTCTTAATGCTGCTGTATACCGTGCCAGAAAGTCCTCGCTGGCTGATGTCGCGCGGCAAGCAAGAACAGGCGGAAGGTATCCTGCGCAAAATTATGGGCAACACGCTTGCAACTCAGGCAGTACAGGAAATTAAACACTCCCTGGATCATGGCCGCAAAACCGGTGGTCGTCTGCTGATGTTTGGCGTGGGCGTGATTGTAATCGGCGTAATGCTCTCCATCTTCCAGCAATTTGTCGGCATCAATGTGGTGCTGTACTACGCGCCGGAAGTGTTCAAAACGCTGGGGGCCAGCACGGATATCGCGCTGTTGCAGACCATTATTGTCGGAGTTATCAACCTCACCTTCACCGTTCTGGCAATTATGACGGTGGATAAATTTGGTCGTAAGCCACTGCAAATTATCGGCGCACTCGGAATGGCAATCGGTATGTTTAGCCTCGGTACCGCGTTTTACACTCAGGCACCGGGTATTGTGGCGCTACTGTCGATGCTGTTCTATGTTGCCGCCTTTGCCATGTCCTGGGGTCCGGTATGCTGGGTACTGCTGTCGGAAATCTTCCCGAATGCTATTCGTGGTAAAGCGCTGGCAATCGCGGTGGCGGCCCAGTGGCTGGCGAACTACTTCGTCTCCTGGACCTTCCCGATGATGGACAAAAACTCCTGGCTGGTGGCCCATTTCCACAACGGTTTCTCCTACTGGATTTACGGTTGTATGGGCGTTCTGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAA", + "dna_sequence_length": 1476, + "functions": [ + "D-xylose transporter" + ], + "id": "CDS_3947", + "location": [ + [ + "NC_000913", + 4242254, + "-", + 1476 + ] + ], + "md5": "e9b544860fc391b2d657089f335ae977", + "parent_gene": "", + "protein_md5": "24cf204035ae320475d91045f211b661", + "protein_translation": "MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPETKKTQQTATL", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013193" + ], + [ + "gene_synonym", + "ECK4024" + ], + [ + "gene_synonym", + "EcoGene:EG10556" + ], + [ + "gene_synonym", + "GI:16131858" + ], + [ + "gene_synonym", + "GeneID:948530" + ], + [ + "gene_synonym", + "JW3992" + ], + [ + "gene_synonym", + "NP_418456.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68183" + ], + [ + "gene_synonym", + "b4032" + ], + [ + "gene_synonym", + "malG" + ], + [ + "gene_synonym", + "malJ" + ] + ], + "dna_sequence": "ATGGCAATGGTCCAACCGAAATCGCAAAAAGCTCGTTTATTTATTACTCACCTGCTACTGCTACTTTTTATCGCAGCGATTATGTTCCCGCTGCTGATGGTCGTCGCTATCTCGCTGCGTCAGGGAAACTTTGCGACCGGCAGCCTGATCCCGGAGCAAATCTCCTGGGATCACTGGAAACTGGCGTTAGGTTTTAGCGTTGAACAGGCTGATGGTCGCATTACGCCACCGCCATTCCCGGTACTGCTGTGGCTGTGGAACTCGGTAAAGGTCGCCGGGATTTCCGCGATTGGCATTGTGGCGCTCTCCACCACCTGCGCCTACGCTTTCGCCCGTATGCGCTTTCCAGGCAAAGCGACGCTGCTGAAAGGAATGCTGATTTTCCAGATGTTCCCGGCAGTACTTTCACTGGTCGCGTTGTATGCGTTGTTTGATCGTCTGGGTGAGTACATTCCATTCATTGGCCTGAATACTCACGGCGGCGTAATTTTCGCGTATCTGGGTGGGATTGCGCTGCATGTCTGGACCATCAAAGGCTATTTCGAAACCATCGACAGTTCGCTGGAAGAAGCTGCTGCGCTGGATGGTGCGACACCGTGGCAGGCCTTCCGCCTTGTCCTGTTGCCGCTGTCAGTACCGATTCTGGCGGTGGTATTCATCCTGTCGTTTATCGCTGCCATTACTGAAGTTCCGGTCGCGTCGCTGTTACTGCGTGACGTAAACAGCTACACCCTGGCCGTGGGGATGCAGCAATACCTCAACCCGCAAAACTACCTGTGGGGTGACTTTGCCGCCGCTGCCGTGATGTCTGCATTACCGATCACCATCGTCTTCTTGCTGGCTCAACGCTGGCTGGTCAACGGCCTGACGGCAGGTGGTGTGAAAGGTTAA", + "dna_sequence_length": 891, + "functions": [ + "maltose transporter subunit" + ], + "id": "CDS_3948", + "location": [ + [ + "NC_000913", + 4243516, + "-", + 891 + ] + ], + "md5": "015937d855eb766898422b51bc5e9a98", + "parent_gene": "", + "protein_md5": "efa68eea5b3ecb8cb067d193aa297e33", + "protein_translation": "MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013195" + ], + [ + "gene_synonym", + "ECK4025" + ], + [ + "gene_synonym", + "EcoGene:EG10555" + ], + [ + "gene_synonym", + "GI:16131859" + ], + [ + "gene_synonym", + "GeneID:948532" + ], + [ + "gene_synonym", + "JW3993" + ], + [ + "gene_synonym", + "NP_418457.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02916" + ], + [ + "gene_synonym", + "b4033" + ], + [ + "gene_synonym", + "malF" + ], + [ + "gene_synonym", + "malJ" + ] + ], + "dna_sequence": "ATGGATGTCATTAAAAAGAAACATTGGTGGCAAAGCGACGCGCTGAAATGGTCAGTGCTAGGTCTGCTCGGCCTGCTGGTGGGTTACCTTGTTGTTTTAATGTACGCACAAGGGGAATACCTGTTCGCCATTACCACGCTGATATTGAGTTCAGCGGGGCTGTATATTTTCGCCAATCGTAAAGCCTACGCCTGGCGCTATGTTTACCCGGGAATGGCTGGAATGGGATTATTCGTCCTCTTCCCTCTGGTCTGCACCATCGCCATTGCCTTCACCAACTACAGCAGCACTAACCAGCTGACTTTTGAACGTGCGCAGGAAGTGTTGTTAGATCGCTCCTGGCAAGCAGGCAAAACCTATAACTTTGGTCTTTACCCGGCGGGCGATGAGTGGCAACTGGCGCTCAGCGACGGCGAAACCGGCAAAAATTACCTCTCCGACGCTTTTAAATTTGGCGGCGAGCAAAAACTGCAACTGAAAGAAACGACCGCCCAGCCCGAAGGCGAACGCGCGAATCTGCGCGTGATTACCCAGAATCGTCAGGCGCTGAGTGACATTACCGCCATTCTGCCGGATGGCAACAAAGTGATGATGAGCTCCCTGCGCCAGTTTTCTGGCACGCAGCCGCTCTACACACTCGACGGTGACGGCACGTTGACGAATAATCAGAGCGGCGTGAAATATCGTCCGAATAACCAAATTGGCTTTTACCAGTCCATTACCGCCGACGGCAACTGGGGTGATGAAAAGCTAAGCCCCGGTTACACCGTGACCACCGGCTGGAAAAACTTTACCCGCGTCTTTACCGACGAAGGCATTCAGAAACCGTTCCTCGCCATTTTCGTCTGGACCGTGGTGTTCTCGCTGATCACTGTCTTTTTAACGGTGGCGGTCGGCATGGTTCTGGCGTGTCTGGTGCAGTGGGAAGCGTTGCGCGGCAAAGCGGTCTATCGCGTCCTGCTGATTCTGCCCTACGCGGTGCCATCGTTCATTTCAATCTTGATTTTCAAAGGGTTGTTTAACCAGAGCTTCGGTGAAATCAACATGATGTTGAGCGCGCTGTTTGGCGTGAAGCCCGCCTGGTTCAGCGATCCGACCACCGCCCGCACGATGCTAATTATCGTCAATACCTGGCTGGGTTATCCGTACATGATGATCCTCTGCATGGGCTTGCTGAAAGCGATTCCGGACGATTTGTATGAAGCCTCAGCAATGGATGGCGCAGGTCCGTTCCAGAACTTCTTTAAGATTACGCTGCCGCTGCTGATTAAACCGCTGACGCCGCTGATGATCGCCAGCTTCGCCTTTAACTTTAACAACTTCGTGCTGATTCAACTGTTAACCAACGGCGGCCCGGATCGTCTTGGCACGACCACGCCAGCCGGTTATACCGACCTGCTTGTTAACTACACCTACCGCATCGCTTTTGAAGGCGGCGGGGGTCAGGACTTCGGTCTGGCGGCAGCAATTGCCACGCTGATCTTCCTGCTGGTGGGTGCGCTGGCGATAGTGAACCTGAAAGCCACGCGAATGAAGTTTGATTAA", + "dna_sequence_length": 1545, + "functions": [ + "maltose transporter subunit" + ], + "id": "CDS_3949", + "location": [ + [ + "NC_000913", + 4245075, + "-", + 1545 + ] + ], + "md5": "18271a54f4feda7993ffb09fd3e065d6", + "parent_gene": "", + "protein_md5": "faf622c364636b73271ca43697fcd8d1", + "protein_translation": "MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSITADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD", + "protein_translation_length": 514, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013200" + ], + [ + "gene_synonym", + "ECK4026" + ], + [ + "gene_synonym", + "EcoGene:EG10554" + ], + [ + "gene_synonym", + "GI:16131860" + ], + [ + "gene_synonym", + "GeneID:948538" + ], + [ + "gene_synonym", + "JW3994" + ], + [ + "gene_synonym", + "NP_418458.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX9" + ], + [ + "gene_synonym", + "b4034" + ], + [ + "gene_synonym", + "malE" + ], + [ + "gene_synonym", + "malJ" + ] + ], + "dna_sequence": "ATGAAAATAAAAACAGGTGCACGCATCCTCGCATTATCCGCATTAACGACGATGATGTTTTCCGCCTCGGCTCTCGCCAAAATCGAAGAAGGTAAACTGGTAATCTGGATTAACGGCGATAAAGGCTATAACGGTCTCGCTGAAGTCGGTAAGAAATTCGAGAAAGATACCGGAATTAAAGTCACCGTTGAGCATCCGGATAAACTGGAAGAGAAATTCCCACAGGTTGCGGCAACTGGCGATGGCCCTGACATTATCTTCTGGGCACACGACCGCTTTGGTGGCTACGCTCAATCTGGCCTGTTGGCTGAAATCACCCCGGACAAAGCGTTCCAGGACAAGCTGTATCCGTTTACCTGGGATGCCGTACGTTACAACGGCAAGCTGATTGCTTACCCGATCGCTGTTGAAGCGTTATCGCTGATTTATAACAAAGATCTGCTGCCGAACCCGCCAAAAACCTGGGAAGAGATCCCGGCGCTGGATAAAGAACTGAAAGCGAAAGGTAAGAGCGCGCTGATGTTCAACCTGCAAGAACCGTACTTCACCTGGCCGCTGATTGCTGCTGACGGGGGTTATGCGTTCAAGTATGAAAACGGCAAGTACGACATTAAAGACGTGGGCGTGGATAACGCTGGCGCGAAAGCGGGTCTGACCTTCCTGGTTGACCTGATTAAAAACAAACACATGAATGCAGACACCGATTACTCCATCGCAGAAGCTGCCTTTAATAAAGGCGAAACAGCGATGACCATCAACGGCCCGTGGGCATGGTCCAACATCGACACCAGCAAAGTGAATTATGGTGTAACGGTACTGCCGACCTTCAAGGGTCAACCATCCAAACCGTTCGTTGGCGTGCTGAGCGCAGGTATTAACGCCGCCAGTCCGAACAAAGAGCTGGCGAAAGAGTTCCTCGAAAACTATCTGCTGACTGATGAAGGTCTGGAAGCGGTTAATAAAGACAAACCGCTGGGTGCCGTAGCGCTGAAGTCTTACGAGGAAGAGTTGGCGAAAGATCCACGTATTGCCGCCACCATGGAAAACGCCCAGAAAGGTGAAATCATGCCGAACATCCCGCAGATGTCCGCTTTCTGGTATGCCGTGCGTACTGCGGTGATCAACGCCGCCAGCGGTCGTCAGACTGTCGATGAAGCCCTGAAAGACGCGCAGACTCGTATCACCAAGTAA", + "dna_sequence_length": 1191, + "functions": [ + "maltose transporter subunit" + ], + "id": "CDS_3950", + "location": [ + [ + "NC_000913", + 4246419, + "-", + 1191 + ] + ], + "md5": "e2290175daa6bb95ba895c1d642ee325", + "parent_gene": "", + "protein_md5": "cce42a1bc3dba537c63b008bbf8fb026", + "protein_translation": "MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK", + "protein_translation_length": 396, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013216" + ], + [ + "gene_synonym", + "ECK4027" + ], + [ + "gene_synonym", + "EcoGene:EG10558" + ], + [ + "gene_synonym", + "GI:16131861" + ], + [ + "gene_synonym", + "GeneID:948537" + ], + [ + "gene_synonym", + "JW3995" + ], + [ + "gene_synonym", + "NP_418459.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68187" + ], + [ + "gene_synonym", + "b4035" + ], + [ + "gene_synonym", + "malK" + ] + ], + "dna_sequence": "ATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCGTGGTGTTTGTCGGACCGTCTGGCTGCGGTAAATCGACTTTACTGCGCATGATTGCCGGGCTTGAGACGATCACCAGCGGCGACCTGTTCATCGGTGAGAAACGGATGAATGACACTCCGCCAGCAGAACGCGGCGTTGGTATGGTGTTTCAGTCTTACGCGCTCTATCCCCACCTGTCAGTAGCAGAAAACATGTCATTTGGCCTGAAACTGGCTGGCGCAAAAAAAGAGGTGATTAACCAACGCGTTAACCAGGTGGCGGAAGTGCTACAACTGGCGCATTTGCTGGATCGCAAACCGAAAGCGCTCTCCGGTGGTCAGCGTCAGCGTGTGGCGATTGGCCGTACGCTGGTGGCCGAGCCAAGCGTATTTTTGCTCGATGAACCGCTCTCCAACCTCGATGCTGCACTGCGTGTGCAAATGCGTATCGAAATCTCCCGTCTGCATAAACGCCTGGGCCGCACAATGATTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTCGCCCGGAACATCTACTGCCGAGTGATATCGCTGACGTCATCCTTGAGGGTGAAGTTCAGGTCGTCGAGCAACTCGGCAACGAAACTCAAATCCATATCCAGATCCCTTCCATTCGTCAAAACCTGGTGTACCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAA", + "dna_sequence_length": 1116, + "functions": [ + "maltose ABC transportor ATPase" + ], + "id": "CDS_3951", + "location": [ + [ + "NC_000913", + 4246784, + "+", + 1116 + ] + ], + "md5": "ad751332daacfbd03ef9f82df6d580af", + "parent_gene": "", + "protein_md5": "599aa7bb9acb7c8383cd6e9a94258fbf", + "protein_translation": "MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTACRRLHKEPGV", + "protein_translation_length": 371, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013218" + ], + [ + "gene_synonym", + "ECK4028" + ], + [ + "gene_synonym", + "EcoGene:EG10528" + ], + [ + "gene_synonym", + "GI:16131862" + ], + [ + "gene_synonym", + "GeneID:948548" + ], + [ + "gene_synonym", + "JW3996" + ], + [ + "gene_synonym", + "NP_418460.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02943" + ], + [ + "gene_synonym", + "b4036" + ], + [ + "gene_synonym", + "lamB" + ], + [ + "gene_synonym", + "malB" + ], + [ + "gene_synonym", + "malL" + ] + ], + "dna_sequence": "ATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTGTTGATTTCCACGGCTATGCACGTTCCGGTATTGGTTGGACAGGTAGCGGCGGTGAACAACAGTGTTTCCAGACTACCGGTGCTCAAAGTAAATACCGTCTTGGCAACGAATGTGAAACTTATGCTGAATTAAAATTGGGTCAGGAAGTGTGGAAAGAGGGCGATAAGAGCTTCTATTTCGACACTAACGTGGCCTATTCCGTCGCACAACAGAATGACTGGGAAGCTACCGATCCGGCCTTCCGTGAAGCAAACGTGCAGGGTAAAAACCTGATCGAATGGCTGCCAGGCTCCACCATCTGGGCAGGTAAGCGCTTCTACCAACGTCATGACGTTCATATGATCGACTTCTACTACTGGGATATTTCTGGTCCTGGTGCCGGTCTGGAAAACATCGATGTTGGCTTCGGTAAACTCTCTCTGGCAGCAACCCGCTCCTCTGAAGCTGGTGGTTCTTCCTCTTTCGCCAGCAACAATATTTATGACTATACCAACGAAACCGCGAACGACGTTTTCGATGTGCGTTTAGCGCAGATGGAAATCAACCCGGGCGGCACATTAGAACTGGGTGTCGACTACGGTCGTGCCAACTTGCGTGATAACTATCGTCTGGTTGATGGCGCATCGAAAGACGGCTGGTTATTCACTGCTGAACATACTCAGAGTGTCCTGAAGGGCTTTAACAAGTTTGTTGTTCAGTACGCTACTGACTCGATGACCTCGCAGGGTAAAGGGCTGTCGCAGGGTTCTGGCGTTGCATTTGATAACGAAAAATTTGCCTACAATATCAACAACAACGGTCACATGCTGCGTATCCTCGACCACGGTGCGATCTCCATGGGCGACAACTGGGACATGATGTACGTGGGTATGTACCAGGATATCAACTGGGATAACGACAACGGCACCAAGTGGTGGACCGTCGGTATTCGCCCGATGTACAAGTGGACGCCAATCATGAGCACCGTGATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAGGCTGGCGACAGCATCTGGTCACGCCCGGCTATTCGTGTCTTCGCAACCTACGCCAAGTGGGATGAGAAATGGGGTTACGACTACACCGGTAACGCTGATAACAACGCGAACTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAA", + "dna_sequence_length": 1341, + "functions": [ + "maltose outer membrane porin (maltoporin)" + ], + "id": "CDS_3952", + "location": [ + [ + "NC_000913", + 4247971, + "+", + 1341 + ] + ], + "md5": "fed7c5e3256353d87f155adccbad6a4e", + "parent_gene": "", + "protein_md5": "c93c8f314eb2a28915971d9ae89a9ac9", + "protein_translation": "MMITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFASNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFTAEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHGAISMGDNWDMMYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRTGDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYTGNADNNANFGKAVPADFNGGSFGRGDSDEWTFGAQMEIWW", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013221" + ], + [ + "gene_synonym", + "ECK4029" + ], + [ + "gene_synonym", + "EcoGene:EG10559" + ], + [ + "gene_synonym", + "GI:16131863" + ], + [ + "gene_synonym", + "GeneID:948547" + ], + [ + "gene_synonym", + "JW3997" + ], + [ + "gene_synonym", + "NP_418461.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03841" + ], + [ + "gene_synonym", + "b4037" + ], + [ + "gene_synonym", + "malM" + ], + [ + "gene_synonym", + "molA" + ] + ], + "dna_sequence": "ATGAAAATGAATAAAAGTCTCATCGTCCTCTGTTTATCAGCAGGGTTACTGGCAAGCGCGCCTGGAATTAGCCTTGCCGATGTTAACTACGTACCGCAAAACACCAGCGACGCGCCAGCCATTCCATCTGCTGCGCTGCAACAACTCACCTGGACACCGGTCGATCAATCTAAAACCCAGACCACCCAACTGGCGACCGGCGGCCAACAACTGAACGTTCCCGGCATCAGTGGTCCGGTTGCTGCGTACAGCGTCCCGGCAAACATTGGCGAACTGACCCTGACGCTGACCAGCGAAGTGAACAAACAAACCAGCGTTTTTGCGCCGAACGTGCTGATTCTTGATCAGAACATGACCCCATCAGCCTTCTTCCCCAGCAGTTATTTCACCTACCAGGAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGATCCGGTTGCTCGTCATACCACCGATGGCTTACTGAAACTGAAAGTGAAAACGAACTCCAGCTCCAGCGTGTTGGTAGGACCTTTATTTGGTTCTTCCGCTCCAGCTCCGGTTACGGTAGGTAACACGGCGGCACCAGCTGTGGCTGCACCCGCTCCGGCACCGGTGAAGAAAAGCGAGCCGATGCTCAACGACACGGAAAGTTATTTTAATACCGCGATCAAAAACGCTGTCGCGAAAGGTGATGTTGATAAGGCGTTAAAACTGCTTGATGAAGCTGAACGCCTGGGATCGACATCTGCCCGTTCCACCTTTATCAGCAGTGTAAAAGGCAAGGGGTAA", + "dna_sequence_length": 921, + "functions": [ + "maltose regulon periplasmic protein" + ], + "id": "CDS_3953", + "location": [ + [ + "NC_000913", + 4249554, + "+", + 921 + ] + ], + "md5": "482ab5b2c1bc0218dd2eec0f60733e60", + "parent_gene": "", + "protein_md5": "4b32077a00c6eb3753e64fe6969d58fb", + "protein_translation": "MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013224" + ], + [ + "gene_synonym", + "ECK4030" + ], + [ + "gene_synonym", + "EcoGene:EG11927" + ], + [ + "gene_synonym", + "GeneID:948546" + ], + [ + "gene_synonym", + "JW3998" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32690" + ], + [ + "gene_synonym", + "b4038" + ], + [ + "gene_synonym", + "yjbI" + ] + ], + "dna_sequence": "ATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAACAGAGATAACTTTATTTATATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATGTTTGATTATGTGCGAATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAATGATTGATACATTGCCAGATAATGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCATTGTCCTTATATAAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAGGTGAATTTCGATACCCAACAGATGATCGATTTTATTAACAGATTTAATACGAATAAATGGCTAATTGATAAAAATAACAATTTTTTTATCCAACTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAA", + "dna_sequence_length": 1581, + "id": "CDS_3954", + "location": [ + [ + "NC_000913", + 4250703, + "+", + 183 + ], + [ + "NC_000913", + 4250885, + "+", + 75 + ], + [ + "NC_000913", + 4250961, + "+", + 1323 + ] + ], + "md5": "66e16cb2bce2fc38b67fd68ba27c7c93", + "parent_gene": "", + "protein_md5": "8056f43fb9e3b0384952d295c9887f1d", + "protein_translation": "MISHILNSGGNNSLMKHDVVQGNNIVDLDLLRNLNGVPGLNRDNFIYISNIFSNIKQRNEKNHAINMFREVSISNDTISVKFYRNEKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLELTIDYSDIFWNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKIFSHCPYIKDPIIRSYIHSDEDNKFDDFMRQHRFSEVNFDTQQMIDFINRFNTNKWLIDKNNNFFIQLIDQALRSTDDMIKANVWHLYKEWIRSDDVSPIFIETEDNLRTFNTNELTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV", + "protein_translation_length": 526, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013227" + ], + [ + "gene_synonym", + "ECK4031" + ], + [ + "gene_synonym", + "EcoGene:EG11369" + ], + [ + "gene_synonym", + "GI:90111677" + ], + [ + "gene_synonym", + "GeneID:948545" + ], + [ + "gene_synonym", + "JW5713" + ], + [ + "gene_synonym", + "NP_418463.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26602" + ], + [ + "gene_synonym", + "b4039" + ], + [ + "gene_synonym", + "sdgG?" + ], + [ + "gene_synonym", + "ubiC" + ] + ], + "dna_sequence": "ATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTGAACAGCAGGGAAAAACGGTAAGCGTGACGATGATCCGCGAAGGGTTTGTCGAGCAGAATGAAATCCCCGAAGAACTGCCGCTGCTGCCGAAAGAGTCTCGTTACTGGTTACGTGAAATTTTGTTATGTGCCGATGGTGAACCGTGGCTTGCCGGTCGTACCGTCGTTCCTGTGTCAACGTTAAGCGGGCCGGAGCTGGCGTTACAAAAATTGGGTAAAACGCCGTTAGGACGCTATCTGTTCACATCATCGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAA", + "dna_sequence_length": 498, + "functions": [ + "chorismate--pyruvate lyase" + ], + "id": "CDS_3955", + "location": [ + [ + "NC_000913", + 4252506, + "+", + 498 + ] + ], + "md5": "a47ca6916013c4fbcc21e3e93908adb6", + "parent_gene": "", + "protein_md5": "ce859521c2918e06100a38b51c5b9506", + "protein_translation": "MSHPALTQLRALRYCKEIPALDPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY", + "protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013229" + ], + [ + "gene_synonym", + "ECK4032" + ], + [ + "gene_synonym", + "EcoGene:EG11370" + ], + [ + "gene_synonym", + "GI:16131866" + ], + [ + "gene_synonym", + "GeneID:948540" + ], + [ + "gene_synonym", + "JW4000" + ], + [ + "gene_synonym", + "NP_418464.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGK1" + ], + [ + "gene_synonym", + "b4040" + ], + [ + "gene_synonym", + "cyr" + ], + [ + "gene_synonym", + "sdgG?" + ], + [ + "gene_synonym", + "ubiA" + ] + ], + "dna_sequence": "ATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCGCGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCTGGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTACCGCAAGTGGTGCTGGGCGCGGCGTTTGGCTGGTCGATTCCAATGGCTTTTGCCGCTGTGAGTGAGTCGGTGCCATTGAGTTGCTGGTTAATGTTCCTCGCCAATATTCTCTGGGCGGTGGCTTACGACACGCAGTATGCGATGGTTGACCGCGATGATGATGTGAAGATTGGCATTAAATCCACGGCAATCCTGTTCGGCCAATACGATAAATTGATTATTGGTATTTTGCAGATTGGCGTACTGGCACTGATGGCGATCATCGGTGAGTTAAATGGCTTAGGCTGGGGATATTACTGGTCAATTCTGGTGGCTGGCGCGCTGTTTGTTTATCAACAAAAACTGATTGCCAACCGCGAGCGTGAAGCCTGCTTTAAAGCATTTATGAATAATAACTATGTTGGTCTGGTACTATTTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGA", + "dna_sequence_length": 873, + "functions": [ + "p-hydroxybenzoate octaprenyltransferase" + ], + "id": "CDS_3956", + "location": [ + [ + "NC_000913", + 4253016, + "+", + 873 + ] + ], + "md5": "f44500b5062d0586d51654c5c9696821", + "parent_gene": "", + "protein_md5": "3b188c398a3baedb4551e575bd27bb0b", + "protein_translation": "MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013232" + ], + [ + "gene_synonym", + "ECK4033" + ], + [ + "gene_synonym", + "EcoGene:EG10740" + ], + [ + "gene_synonym", + "GI:90111678" + ], + [ + "gene_synonym", + "GeneID:948541" + ], + [ + "gene_synonym", + "JW4001" + ], + [ + "gene_synonym", + "NP_418465.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7A7" + ], + [ + "gene_synonym", + "b4041" + ], + [ + "gene_synonym", + "plsB" + ] + ], + "dna_sequence": "ATGTCCGGCTGGCCACGAATTTACTACAAATTACTGAATTTACCATTAAGCATCCTGGTAAAAAGCAAGTCTATTCCGGCAGATCCTGCCCCGGAACTGGGGCTGGATACCTCTCGTCCAATTATGTACGTTTTACCGTACAACTCGAAAGCAGATTTGCTGACGTTGCGCGCCCAGTGTCTGGCACATGACTTGCCTGACCCGTTAGAGCCGCTGGAAATCGACGGCACGCTACTGCCGCGCTATGTGTTCATTCACGGCGGGCCGCGTGTGTTCACCTATTACACGCCGAAAGAAGAGTCTATTAAGCTGTTCCACGACTATCTCGATTTGCACCGTAGCAACCCAAATCTGGATGTGCAGATGGTGCCAGTGTCGGTGATGTTTGGTCGCGCGCCGGGGCGTGAAAAAGGCGAAGTGAACCCGCCGCTGCGTATGCTTAACGGCGTACAGAAATTTTTCGCTGTACTGTGGCTCGGTCGCGACAGTTTTGTGCGTTTCTCGCCGTCAGTTTCGCTGCGCCGTATGGCGGATGAACACGGCACGGATAAAACTATCGCTCAGAAACTGGCGCGCGTGGCGCGTATGCACTTTGCCCGTCAACGTCTGGCTGCCGTAGGCCCACGTTTGCCTGCTCGTCAGGATCTGTTTAATAAGCTGCTCGCCTCCCGCGCCATTGCCAAAGCGGTAGAAGATGAAGCGCGCAGCAAAAAAATCTCCCATGAAAAAGCGCAGCAGAACGCGATTGCACTGATGGAAGAGATTGCGGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCAGGGCATCAACGTCCATAACGCTGAGCGCGTTCGCCAGCTGGCCCACGACGGTCATGAGCTGGTATATGTGCCTTGCCACCGCAGTCACATGGACTACCTGCTGCTTTCTTACGTGCTGTATCACCAGGGGCTGGTGCCGCCGCATATCGCCGCCGGGATCAACCTGAATTTCTGGCCTGCCGGGCCGATTTTCCGCCGTCTGGGGGCGTTCTTTATTCGCCGTACGTTTAAAGGCAATAAACTTTATTCCACCGTTTTCCGGGAGTATCTCGGCGAACTGTTCAGCCGTGGTTATTCCGTCGAGTACTTCGTGGAAGGCGGTCGTTCCCGTACGGGGCGTTTGCTGGATCCGAAAACTGGTACGCTGTCGATGACCATTCAGGCGATGCTGCGTGGCGGCACGCGTCCGATTACGCTGATTCCGATCTATATCGGTTATGAGCACGTCATGGAAGTGGGTACTTACGCCAAAGAACTGCGCGGCGCGACGAAAGAGAAAGAGAGCCTGCCGCAGATGCTGCGCGGTTTAAGCAAGCTGCGTAATCTCGGTCAGGGTTACGTCAACTTCGGTGAACCAATGCCGTTGATGACCTACCTTAACCAGCATGTACCTGACTGGCGTGAATCTATCGATCCCATCGAAGCGGTGCGTCCGGCATGGTTAACGCCGACGGTCAATAATATTGCTGCCGATCTGATGGTACGCATTAACAACGCAGGCGCGGCAAACGCCATGAACCTGTGCTGTACTGCGCTACTGGCATCACGTCAGCGCTCACTCACCCGCGAGCAGTTAACCGAGCAACTCAACTGCTACCTGGATCTGATGCGCAACGTGCCCTACTCCACGGACTCTACCGTTCCTTCAGCCAGCGCCAGCGAGCTTATCGATCACGCGCTGCAAATGAACAAGTTTGAAGTCGAGAAAGACACAATCGGCGACATCATCATTCTGCCGCGCGAGCAAGCGGTGCTGATGACCTACTATCGCAACAACATTGCGCATATGTTGGTGCTGCCTTCGCTGATGGCGGCAATCGTCACCCAGCATCGCCACATCTCCCGCGACGTATTGATGGAGCACGTCAATGTGCTTTACCCAATGCTGAAAGCGGAGCTGTTCCTGCGCTGGGATCGCGACGAGTTGCCGGACGTTATTGATGCGCTGGCAAATGAGATGCAACGTCAGGGGCTGATTACCCTGCAAGATGATGAGTTGCATATCAACCCGGCGCATTCTCGCACGCTACAGCTGCTGGCCGCAGGCGCGCGCGAAACGCTGCAACGTTATGCCATCACCTTCTGGTTGTTGAGTGCCAACCCGTCGATCAACCGCGGTACGCTGGAGAAAGAGAGCCGCACCGTCGCGCAACGTCTCTCCGTGCTGCACGGCATCAACGCGCCGGAGTTCTTCGACAAGGCGGTGTTCAGTTCTCTGGTGCTGACACTGCGTGATGAAGGGTATATCAGCGATAGCGGCGATGCCGAACCGGCAGAAACGATGAAGGTTTATCAGTTGCTGGCGGAGTTGATTACATCAGACGTGCGTTTGACGATTGAGAGTGCGACGCAGGGCGAAGGGTAA", + "dna_sequence_length": 2424, + "functions": [ + "glycerol-3-phosphate O-acyltransferase" + ], + "id": "CDS_3957", + "location": [ + [ + "NC_000913", + 4256466, + "-", + 2424 + ] + ], + "md5": "d1198da5fc5f558c3b5ef7bc383ba778", + "parent_gene": "", + "protein_md5": "e4d26b48161240273455ecf80e7e407a", + "protein_translation": "MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG", + "protein_translation_length": 807, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013235" + ], + [ + "gene_synonym", + "ECK4034" + ], + [ + "gene_synonym", + "EcoGene:EG10224" + ], + [ + "gene_synonym", + "GI:16131868" + ], + [ + "gene_synonym", + "GeneID:948543" + ], + [ + "gene_synonym", + "JW4002" + ], + [ + "gene_synonym", + "NP_418466.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABN1" + ], + [ + "gene_synonym", + "b4042" + ], + [ + "gene_synonym", + "dgkA" + ] + ], + "dna_sequence": "ATGGCCAATAATACCACTGGATTCACCCGAATTATCAAAGCTGCTGGCTATTCCTGGAAAGGTTTACGCGCTGCATGGATCAACGAAGCGGCATTCCGTCAGGAAGGCGTAGCGGTATTGTTGGCGGTGGTCATCGCCTGCTGGCTGGATGTGGACGCGATTACCCGCGTGCTGCTTATCAGCTCCGTGATGCTGGTGATGATTGTGGAAATCCTCAATAGCGCCATCGAAGCAGTGGTTGACCGAATTGGCTCTGAATACCATGAGCTTTCCGGACGCGCAAAAGATATGGGATCCGCTGCGGTGCTGATTGCCATTATCGTCGCCGTGATTACCTGGTGCATTCTGTTATGGTCGCATTTTGGATAA", + "dna_sequence_length": 369, + "functions": [ + "diacylglycerol kinase" + ], + "id": "CDS_3958", + "location": [ + [ + "NC_000913", + 4256637, + "+", + 369 + ] + ], + "md5": "adc1ec58278945d53d60ee018e0a121b", + "parent_gene": "", + "protein_md5": "93f682dc56900629d70acf47473a6500", + "protein_translation": "MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSHFG", + "protein_translation_length": 122, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013241" + ], + [ + "gene_synonym", + "ECK4035" + ], + [ + "gene_synonym", + "EcoGene:EG10533" + ], + [ + "gene_synonym", + "GI:16131869" + ], + [ + "gene_synonym", + "GeneID:948544" + ], + [ + "gene_synonym", + "JW4003" + ], + [ + "gene_synonym", + "NP_418467.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7C2" + ], + [ + "gene_synonym", + "b4043" + ], + [ + "gene_synonym", + "exrA" + ], + [ + "gene_synonym", + "lexA" + ], + [ + "gene_synonym", + "spr" + ], + [ + "gene_synonym", + "tsl" + ], + [ + "gene_synonym", + "umuA" + ] + ], + "dna_sequence": "ATGAAAGCGTTAACGGCCAGGCAACAAGAGGTGTTTGATCTCATCCGTGATCACATCAGCCAGACAGGTATGCCGCCGACGCGTGCGGAAATCGCGCAGCGTTTGGGGTTCCGTTCCCCAAACGCGGCTGAAGAACATCTGAAGGCGCTGGCACGCAAAGGCGTTATTGAAATTGTTTCCGGCGCATCACGCGGGATTCGTCTGTTGCAGGAAGAGGAAGAAGGGTTGCCGCTGGTAGGTCGTGTGGCTGCCGGTGAACCACTTCTGGCGCAACAGCATATTGAAGGTCATTATCAGGTCGATCCTTCCTTATTCAAGCCGAATGCTGATTTCCTGCTGCGCGTCAGCGGGATGTCGATGAAAGATATCGGCATTATGGATGGTGACTTGCTGGCAGTGCATAAAACTCAGGATGTACGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAA", + "dna_sequence_length": 609, + "functions": [ + "transcriptional repressor of SOS regulon" + ], + "id": "CDS_3959", + "location": [ + [ + "NC_000913", + 4257115, + "+", + 609 + ] + ], + "md5": "44cf7d86ba311063359108346586762d", + "parent_gene": "", + "protein_md5": "0f8aa8f591e0c3d6aa927c9a32cd25c9", + "protein_translation": "MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL", + "protein_translation_length": 202, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013243" + ], + [ + "gene_synonym", + "ECK4036" + ], + [ + "gene_synonym", + "EcoGene:EG11491" + ], + [ + "gene_synonym", + "GI:162135919" + ], + [ + "gene_synonym", + "GeneID:948554" + ], + [ + "gene_synonym", + "JW4004" + ], + [ + "gene_synonym", + "NP_418468.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28303" + ], + [ + "gene_synonym", + "b4044" + ], + [ + "gene_synonym", + "dinF" + ] + ], + "dna_sequence": "ATGCCGCCTGGCGTCGCGGTTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGTAATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTACGCATGAGCACCACCGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAGGCGCGGCGCTTTCTTGAAATCCGCTGGTTAAGCGCACCGGCGTCGCTGGCGAATCTGGTATTACTCGGTTGGTTACTCGGCGTGCAATATGCCCGTGCGCCAGTAATTTTGTTAGTGGTCGGCAATATCCTCAACATTGTGCTGGATGTCTGGCTGGTGATGGGGCTGCATATGAACGTGCAGGGCGCGGCGCTGGCGACGGTTATTGCGGAATATGCAACATTGCTGATTGGTCTGCTAATGGTGCGTAAAATCCTCAAACTACGCGGAATTTCCGGCGAAATGCTGAAAACTGCCTGGCGAGGAAACTTCCGTCGCTTGCTGGCGCTTAACCGCGATATCATGCTGCGTTCGCTGTTGTTGCAACTCTGTTTCGGCGCGATCACCGTACTTGGCGCGCGACTGGGGAGTGACATTATCGCTGTTAACGCGGTTCTGATGACGCTACTCACCTTTACCGCCTATGCGCTGGATGGTTTTGCCTACGCGGTTGAAGCGCACTCCGGTCAGGCATACGGTGCGCGCGACGGTAGCCAGTTGCTGGATGTCTGGCGGGCAGCGTGCCGCCAGTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCGGTGGTTGGCGTCTGGTGTTATCTGCTGGACGGCATGTTTATAGGCGCAACGCGTGCCACCGAAATGCGTAACAGTATGGCGGTGGCCGCCGCAGGTTTTGCGCTGACGCTCCTTACGCTGCCGTGGCTGGGTAATCATGCTTTGTGGCTGGCATTAACCGTCTTTCTGGCGTTGCGCGGGCTTTCTCTGGCGGCTATCTGGCGGCGTCACTGGCGCAATGGTACCTGGTTTGCCGCAACGTGA", + "dna_sequence_length": 1380, + "functions": [ + "oxidative stress resistance protein", + "putative MATE family efflux pump", + "UV and mitomycin C inducible protein" + ], + "id": "CDS_3960", + "location": [ + [ + "NC_000913", + 4257742, + "+", + 1380 + ] + ], + "md5": "b32dd0a6db671b577218f47a72bb98f5", + "parent_gene": "", + "protein_md5": "e59da24bee7a5048cdb3e9de7eb0238f", + "protein_translation": "MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARTLVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPVVGVWCYLLDGMFIGATRATEMRNSMAVAAAGFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT", + "protein_translation_length": 459, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013247" + ], + [ + "gene_synonym", + "ECK4037" + ], + [ + "gene_synonym", + "EcoGene:EG11928" + ], + [ + "gene_synonym", + "GI:16131871" + ], + [ + "gene_synonym", + "GeneID:948553" + ], + [ + "gene_synonym", + "JW4005" + ], + [ + "gene_synonym", + "NP_418469.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68206" + ], + [ + "gene_synonym", + "b4045" + ], + [ + "gene_synonym", + "yjbJ" + ] + ], + "dna_sequence": "ATGAATAAAGATGAAGCCGGCGGTAACTGGAAACAGTTTAAAGGTAAAGTGAAAGAGCAATGGGGCAAACTGACCGATGATGATATGACGATCATTGAAGGTAAACGTGATCAACTGGTCGGTAAAATCCAGGAACGTTATGGTTATCAGAAAGATCAGGCAGAAAAAGAGGTCGTGGATTGGGAAACCCGCAATGAATATCGCTGGTAA", + "dna_sequence_length": 210, + "functions": [ + "stress-induced protein, UPF0337 family" + ], + "id": "CDS_3961", + "location": [ + [ + "NC_000913", + 4259237, + "+", + 210 + ] + ], + "md5": "406404f2f6c0088f8e98a593c83c958a", + "parent_gene": "", + "protein_md5": "93fa29eb4f4d25c14ab2ab5e3612a356", + "protein_translation": "MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVVDWETRNEYRW", + "protein_translation_length": 69, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013249" + ], + [ + "gene_synonym", + "ECK4038" + ], + [ + "gene_synonym", + "EcoGene:EG11929" + ], + [ + "gene_synonym", + "GI:90111679" + ], + [ + "gene_synonym", + "GeneID:948552" + ], + [ + "gene_synonym", + "JW5714" + ], + [ + "gene_synonym", + "NP_418470.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC51" + ], + [ + "gene_synonym", + "b4046" + ], + [ + "gene_synonym", + "yjbK" + ], + [ + "gene_synonym", + "zur" + ] + ], + "dna_sequence": "ATGGAAAAGACCACAACGCAGGAGTTATTAGCGCAGGCTGAAAAAATCTGCGCGCAGCGTAATGTGCGCCTGACCCCACAGCGCCTGGAAGTGTTGCGCCTGATGAGTCTGCAGGATGGCGCTATCAGCGCTTATGATCTGCTTGATTTACTGCGCGAAGCTGAACCGCAAGCCAAGCCGCCAACGGTTTATCGCGCGCTGGATTTTCTGCTTGAGCAAGGTTTTGTGCATAAGGTGGAATCCACCAACAGTTATGTGCTCTGTCATCTGTTCGATCAGCCCACCCATACGTCAGCCATGTTTATTTGCGATCGCTGCGGCGCAGTGAAAGAAGAGTGTGCAGAAGGCGTGGAAGACATTATGCATACGCTGGCGGCAAAAATGGGGTTTGCCCTGCGGCATAATGTGATTGAAGCACATGGGCTCTGTGCGGCATGTGTAGAAGTGGAAGCGTGTCGTCATCCTGAACAGTGCCAGCATGATCACTCTGTGCAGGTGAAAAAGAAACCGCGTTAA", + "dna_sequence_length": 516, + "functions": [ + "transcriptional repressor, Zn(II)-binding" + ], + "id": "CDS_3962", + "location": [ + [ + "NC_000913", + 4260003, + "-", + 516 + ] + ], + "md5": "3a1e72f10626d7df8ff8553514892c34", + "parent_gene": "", + "protein_md5": "4d1307ac9a78a32c71b172790fb90c0c", + "protein_translation": "MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQHDHSVQVKKKPR", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013253" + ], + [ + "gene_synonym", + "ECK4039" + ], + [ + "gene_synonym", + "EcoGene:EG11930" + ], + [ + "gene_synonym", + "GI:16131873" + ], + [ + "gene_synonym", + "GeneID:948551" + ], + [ + "gene_synonym", + "JW4007" + ], + [ + "gene_synonym", + "NP_418471.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32693" + ], + [ + "gene_synonym", + "b4047" + ], + [ + "gene_synonym", + "yjbL" + ] + ], + "dna_sequence": "ATGTTGAAGATAATACCCGGTGCAACTGGATACTTTAATAAAACACTCAATTCAAATCAATTCGATAATGAAGATGCAATCAAAGATAAATTAGATAATAGAGGTTCAATCAAAGGTAAATTAAATAATATATATGGTAAATCTATTGATTATGCAGCGCTGCGTCATCGGGATATAATTATTGCAAAAATAGATTTGTTTATTCAACGAATCACGCATAATTTATGGCATGCACGTAAAAAAATGTGTTTTTAA", + "dna_sequence_length": 255, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3963", + "location": [ + [ + "NC_000913", + 4260321, + "+", + 255 + ] + ], + "md5": "b08c2313b2e0bcda6a93d0135bee2dc8", + "parent_gene": "", + "protein_md5": "38a3977740e37b9bb28288ef09c15954", + "protein_translation": "MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNIYGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013255" + ], + [ + "gene_synonym", + "ECK4040" + ], + [ + "gene_synonym", + "EcoGene:EG11931" + ], + [ + "gene_synonym", + "GI:16131874" + ], + [ + "gene_synonym", + "GeneID:948550" + ], + [ + "gene_synonym", + "JW4008" + ], + [ + "gene_synonym", + "NP_418472.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32694" + ], + [ + "gene_synonym", + "b4048" + ], + [ + "gene_synonym", + "yjbM" + ] + ], + "dna_sequence": "ATGTGGGTCAATAAGTATATTGACGATTGCACTGATGAGGATTTAAACGATCGTGACTTTATTGCATCAGTTGTTGACCGGGCTATTTTTCATTTCGCGATTAATAGTATATGTAATCCTGGGGATAATAAAGATGCAATGCCCATTGAACAATGTACTTTTGATGTAGAAACTAAGAATGACCTTCCCTCCACGGTTCAGCTATTTTATGAGGAATCTAAGGATAATGAACCTTTAGCGAATATACATTTTCAAGCAATAGGTTCTGGTTTTTTAACGTTTGTTAATGCCTGCCAGGAACATGATGACAACAGCTTAAAATTATTTGCTTCGCTGTTAATTTCACTTTCATATTCTAGTGCCTACGCAGATTTATCAGAAACAGTGTATATTAATGAAAATAATGAGAGCTACCTGAAAGCTCAGTTTGAAAAATTATCTCAACGTGATATGAAGAAGTACCTGGGAGAGATGAAGCGTCTGGCTGATGGGGGAGAAATGAATTTTGATGGCTATCTGGATAAGATGTCACATCTGGTGAATGAAGGAACGCTCGATCCTGATATTTTAAGCAAAATGCGAGATGCTGCACCACAATTAATTAGCTTCGCGAAGTCGTTTGACCCAACCTCAAAGGAAGAGATTAAAATACTTACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAA", + "dna_sequence_length": 708, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3964", + "location": [ + [ + "NC_000913", + 4260599, + "+", + 708 + ] + ], + "md5": "08b08250fa2c9b646be99ef897b0e30a", + "parent_gene": "", + "protein_md5": "0c1dfadd571380c877acbbb5ccffdf50", + "protein_translation": "MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013258" + ], + [ + "gene_synonym", + "ECK4041" + ], + [ + "gene_synonym", + "EcoGene:EG11932" + ], + [ + "gene_synonym", + "GI:635341467" + ], + [ + "gene_synonym", + "GeneID:948558" + ], + [ + "gene_synonym", + "JW5950" + ], + [ + "gene_synonym", + "NP_418473.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32695" + ], + [ + "gene_synonym", + "b4049" + ], + [ + "gene_synonym", + "dusA" + ], + [ + "gene_synonym", + "yjbN" + ] + ], + "dna_sequence": "ATGCACGGTAATTCTGAAATGCAAAAAATCAACCAAACCAGCGCAATGCCTGAAAAAACTGACGTTCACTGGAGTGGTCGGTTTAGCGTTGCACCAATGCTCGACTGGACGGACAGACATTGCCGCTATTTCTTGCGTCTGCTTTCCCGCAATACGTTGCTGTATACCGAAATGGTGACCACAGGGGCGATTATTCACGGTAAAGGTGATTATCTGGCGTACAGTGAAGAAGAACATCCGGTAGCGTTGCAACTGGGCGGTAGCGATCCGGCGGCGCTGGCGCAGTGTGCAAAGCTGGCAGAAGCGCGCGGATATGATGAGATCAACCTGAATGTCGGCTGCCCGTCTGACCGGGTGCAGAACGGCATGTTTGGTGCGTGTCTGATGGGTAATGCGCAGCTGGTTGCCGACTGCGTGAAAGCGATGCGCGATGTGGTGTCGATTCCGGTGACGGTGAAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCAACATATGGATGGCGTGATGGTCGGGCGCGAGGCGTATCAGAATCCGGGTATTCTGGCGGCGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAA", + "dna_sequence_length": 1038, + "functions": [ + "tRNA-dihydrouridine synthase A" + ], + "id": "CDS_3965", + "location": [ + [ + "NC_000913", + 4261669, + "+", + 1038 + ] + ], + "md5": "e660d17845d4594687f6cb70fa63530d", + "parent_gene": "", + "protein_md5": "a45a1d59739abb941afb6bfdadcce6a3", + "protein_translation": "MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR", + "protein_translation_length": 345, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013260" + ], + [ + "gene_synonym", + "ECK4042" + ], + [ + "gene_synonym", + "EcoGene:EG11933" + ], + [ + "gene_synonym", + "GI:90111680" + ], + [ + "gene_synonym", + "GeneID:948557" + ], + [ + "gene_synonym", + "JW5716" + ], + [ + "gene_synonym", + "NP_418474.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32696" + ], + [ + "gene_synonym", + "b4050" + ], + [ + "gene_synonym", + "pspG" + ], + [ + "gene_synonym", + "yjbO" + ] + ], + "dna_sequence": "ATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGCCGTGGTTACTACTGGCGATTGCGGTGGTGTGGGTTATTAAGGCGATTAAAGCACCAAAAGTGCCGAAATATCAGCGTTATGACCGCTGGCGTTACTAA", + "dna_sequence_length": 243, + "functions": [ + "phage shock protein G" + ], + "id": "CDS_3966", + "location": [ + [ + "NC_000913", + 4262840, + "+", + 243 + ] + ], + "md5": "4164a4be6f5aa4199cf8b649d0920017", + "parent_gene": "", + "protein_md5": "4443201c69f83993fd291831999936fe", + "protein_translation": "MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013262" + ], + [ + "gene_synonym", + "ECK4043" + ], + [ + "gene_synonym", + "EcoGene:EG11492" + ], + [ + "gene_synonym", + "GI:16131877" + ], + [ + "gene_synonym", + "GeneID:948556" + ], + [ + "gene_synonym", + "JW4011" + ], + [ + "gene_synonym", + "NP_418475.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28304" + ], + [ + "gene_synonym", + "b4051" + ], + [ + "gene_synonym", + "hcz" + ], + [ + "gene_synonym", + "hzc" + ], + [ + "gene_synonym", + "qor" + ], + [ + "gene_synonym", + "qorA" + ] + ], + "dna_sequence": "ATGGCAACACGAATTGAATTTCACAAGCACGGTGGCCCGGAAGTACTTCAAGCCGTAGAGTTCACTCCTGCCGATCCGGCGGAGAATGAAATCCAGGTCGAAAATAAAGCCATCGGCATCAATTTTATCGACACATATATCCGCAGCGGCCTTTACCCGCCGCCATCGCTACCCAGCGGATTAGGCACCGAAGCAGCAGGCATCGTGAGTAAAGTCGGCAGTGGTGTAAAGCATATTAAGGCAGGCGATCGTGTAGTCTATGCGCAGTCGGCGTTAGGCGCTTACAGCTCTGTGCATAACATTATTGCGGATAAAGCGGCGATTCTGCCTGCGGCAATTTCTTTTGAGCAAGCTGCGGCATCCTTCCTGAAAGGCTTAACGGTTTATTATCTGCTGCGCAAAACCTATGAAATTAAACCCGATGAACAGTTCCTGTTCCACGCAGCGGCTGGCGGCGTTGGCTTAATTGCCTGCCAGTGGGCAAAAGCCCTGGGCGCGAAACTTATCGGCACCGTAGGAACCGCGCAAAAAGCGCAGAGCGCGCTAAAAGCGGGCGCGTGGCAGGTTATTAACTATCGTGAAGAGGATCTGGTCGAGCGGTTAAAAGAGATCACCGGCGGTAAGAAAGTGCGCGTGGTGTACGATTCCGTGGGCAGAGACACCTGGGAACGGTCGCTGGATTGCCTGCAACGCCGCGGCTTAATGGTCAGTTTTGGCAACTCATCAGGTGCGGTTACCGGTGTGAACTTAGGCATTCTCAATCAAAAAGGCTCGTTGTATGTGACACGCCCTTCCCTGCAAGGCTATATCACCACGCGGGAGGAATTAACCGAGGCCAGTAATGAACTGTTCTCTTTGATTGCCAGCGGTGTGATTAAGGTCGATGTCGCCGAGCAGCAGAAATATCCGCTGAAGGATGCGCAGCGTGCGCATGAGATTCTGGAAAGCCGGGCGACGCAAGGTTCCAGCCTGCTGATTCCATAA", + "dna_sequence_length": 984, + "functions": [ + "quinone oxidoreductase, NADPH-dependent" + ], + "id": "CDS_3967", + "location": [ + [ + "NC_000913", + 4264231, + "-", + 984 + ] + ], + "md5": "4aedb24e18190b947df62c57035161d9", + "parent_gene": "", + "protein_md5": "ee7e32053af8174284ba5d1197f85c7e", + "protein_translation": "MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013269" + ], + [ + "gene_synonym", + "ECK4044" + ], + [ + "gene_synonym", + "EcoGene:EG10236" + ], + [ + "gene_synonym", + "GI:16131878" + ], + [ + "gene_synonym", + "GeneID:948555" + ], + [ + "gene_synonym", + "JW4012" + ], + [ + "gene_synonym", + "NP_418476.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB0" + ], + [ + "gene_synonym", + "b4052" + ], + [ + "gene_synonym", + "dnaB" + ], + [ + "gene_synonym", + "groP" + ], + [ + "gene_synonym", + "grpA" + ], + [ + "gene_synonym", + "grpD" + ] + ], + "dna_sequence": "ATGGCAGGAAATAAACCCTTCAACAAACAGCAGGCTGAACCCCGCGAACGCGATCCACAAGTTGCCGGGCTGAAAGTGCCTCCGCACTCGATCGAAGCGGAGCAGTCGGTGTTGGGCGGTTTAATGCTAGATAACGAACGCTGGGATGATGTAGCCGAGCGTGTGGTAGCAGACGATTTTTACACCCGCCCACACCGTCATATCTTTACTGAAATGGCGCGTTTGCAGGAAAGCGGTAGCCCTATCGATCTGATTACTCTTGCGGAATCGCTGGAACGCCAGGGGCAACTCGATAGCGTCGGTGGTTTTGCTTATCTGGCAGAGCTGTCAAAAAATACGCCAAGTGCGGCTAACATCAGTGCCTATGCGGACATCGTGCGTGAACGTGCCGTTGTCCGTGAGATGATCTCGGTTGCGAATGAGATTGCCGAAGCTGGTTTTGATCCGCAGGGGCGTACCAGCGAAGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCACACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCCGGCCTGACGCCAACGGAAGTGCGTTCCCGCGCACGCCGTATTGCCCGTGAACACGGCGGCATCGGGCTTATCATGATCGACTACCTGCAACTGATGCGCGTACCGGCGCTTTCCGATAACCGTACGCTGGAAATTGCAGAAATCTCTCGCTCGCTGAAAGCACTGGCGAAAGAACTGAACGTGCCGGTGGTGGCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTCCGACCTGCGTGAATCTGGCTCTATCGAGCAGGATGCGGACTTGATCATGTTTATCTATCGTGATGAGGTGTATCACGAAAACAGTGATTTAAAAGGCATCGCGGAAATTATTATCGGTAAACAACGTAACGGCCCAATCGGGACGGTACGCCTGACCTTTAACGGTCAATGGTCGCGCTTCGACAACTATGCGGGGCCGCAGTACGACGACGAATAA", + "dna_sequence_length": 1416, + "functions": [ + "replicative DNA helicase" + ], + "id": "CDS_3968", + "location": [ + [ + "NC_000913", + 4264314, + "+", + 1416 + ] + ], + "md5": "d6ab0a289cbf2a60e1497efd4c9b1c76", + "parent_gene": "", + "protein_md5": "6f953429824e1de805af19f8ff1e525e", + "protein_translation": "MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE", + "protein_translation_length": 471, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013272" + ], + [ + "gene_synonym", + "ECK4045" + ], + [ + "gene_synonym", + "EcoGene:EG10001" + ], + [ + "gene_synonym", + "GI:16131879" + ], + [ + "gene_synonym", + "GeneID:948564" + ], + [ + "gene_synonym", + "JW4013" + ], + [ + "gene_synonym", + "NP_418477.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6B4" + ], + [ + "gene_synonym", + "alr" + ], + [ + "gene_synonym", + "b4053" + ] + ], + "dna_sequence": "ATGCAAGCGGCAACTGTTGTGATTAACCGCCGCGCTCTGCGACACAACCTGCAACGTCTTCGTGAACTGGCCCCTGCCAGTAAAATGGTTGCGGTGGTGAAAGCGAACGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATACCGCCGTGCATAACGAAGAACAGCTGGCTGCGCTGGAAGAGGCTAGCCTGGACGAGCCGGTTACCGTCTGGATGAAACTCGATACCGGTATGCACCGTCTGGGCGTAAGGCCGGAACAGGCTGAGGCGTTTTATCATCGCCTGACCCAGTGCAAAAACGTTCGTCAGCCGGTGAATATCGTCAGCCATTTTGCGCGCGCGGATGAACCAAAATGTGGCGCAACCGAGAAACAACTCGCTATCTTTAATACCTTTTGCGAAGGCAAACCTGGTCAACGTTCCATTGCCGCGTCGGGTGGCATTCTGCTGTGGCCACAGTCGCATTTTGACTGGGTGCGCCCGGGCATCATTCTTTATGGCGTCTCGCCGCTGGAAGATCGCTCCACCGGTGCCGATTTTGGCTGTCAGCCAGTGATGTCACTAACCTCCAGCCTGATTGCCGTGCGTGAGCATAAAGCCGGAGAGCCTGTTGGTTATGGTGGAACCTGGGTAAGCGAACGTGATACCCGTCTTGGCGTAGTCGCGATGGGCTATGGCGATGGTTATCCGCGCGCCGCGCCGTCCGGTACGCCAGTGCTGGTGAACGGTCGCGAAGTACCGATTGTCGGGCGCGTGGCGATGGATATGATCTGCGTAGACTTAGGTCCACAGGCGCAGGACAAAGCCGGGGATCCGGTCATTTTATGGGGCGAAGGTTTGCCCGTAGAACGTATCGCTGAAATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAA", + "dna_sequence_length": 1080, + "functions": [ + "alanine racemase, biosynthetic, PLP-binding" + ], + "id": "CDS_3969", + "location": [ + [ + "NC_000913", + 4265782, + "+", + 1080 + ] + ], + "md5": "b7f27626fd708b1c2e4281ff32bbbdeb", + "parent_gene": "", + "protein_md5": "4acb9d16a7550979aa171f964e4ba7ed", + "protein_translation": "MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD", + "protein_translation_length": 359, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013278" + ], + [ + "gene_synonym", + "ECK4046" + ], + [ + "gene_synonym", + "EcoGene:EG11040" + ], + [ + "gene_synonym", + "GI:16131880" + ], + [ + "gene_synonym", + "GeneID:948563" + ], + [ + "gene_synonym", + "JW4014" + ], + [ + "gene_synonym", + "NP_418478.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04693" + ], + [ + "gene_synonym", + "b4054" + ], + [ + "gene_synonym", + "tyrB" + ] + ], + "dna_sequence": "GTGTTTCAAAAAGTTGACGCCTACGCTGGCGACCCGATTCTTACGCTTATGGAGCGTTTTAAAGAAGACCCTCGCAGCGACAAAGTGAATTTAAGTATCGGTCTGTACTACAACGAAGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGACTAACGGCGTGCGCTTTAATGACCTGTTGGCGACGCTGAAAACATTACCTGCCCGCAGTATTGTGTTGCTGCATCCATGTTGCCACAACCCAACGGGTGCCGATCTCACTAATGATCAGTGGGATGCGGTGATTGAAATTCTCAAAGCCCGCGAGCTTATTCCATTCCTCGATATTGCCTATCAAGGATTTGGTGCCGGTATGGAAGAGGATGCCTACGCTATTCGCGCCATTGCCAGCGCTGGATTACCCGCTCTGGTGAGCAATTCGTTCTCGAAAATTTTCTCCCTTTACGGCGAGCGCGTCGGCGGACTTTCTGTTATGTGTGAAGATGCCGAAGCCGCTGGCCGCGTACTGGGGCAATTGAAAGCAACAGTTCGCCGCAACTACTCCAGCCCGCCGAATTTTGGTGCGCAGGTGGTGGCTGCAGTGCTGAATGACGAGGCATTGAAAGCCAGCTGGCTGGCGGAAGTAGAAGAGATGCGTACTCGCATTCTGGCAATGCGTCAGGAATTGGTGAAGGTATTAAGCACAGAGATGCCAGAACGCAATTTCGATTATCTGCTTAATCAGCGCGGCATGTTCAGTTATACCGGTTTAAGTGCCGCTCAGGTTGACCGACTACGTGAAGAATTTGGTGTCTATCTCATCGCCAGCGGTCGCATGTGTGTCGCCGGGTTAAATACGGCAAATGTACAACGTGTGGCAAAGGCGTTTGCTGCGGTGATGTAA", + "dna_sequence_length": 1194, + "functions": [ + "tyrosine aminotransferase, tyrosine-repressible, PLP-dependent" + ], + "id": "CDS_3970", + "location": [ + [ + "NC_000913", + 4267114, + "+", + 1194 + ] + ], + "md5": "9e9b863724475aafe8f85ebb3b43e861", + "parent_gene": "", + "protein_md5": "4027df06664f119e23d3bfb1459894cf", + "protein_translation": "MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM", + "protein_translation_length": 397, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4429" + ], + [ + "gene_synonym", + "EcoGene:EG14350" + ], + [ + "gene_synonym", + "GI:145698341" + ], + [ + "gene_synonym", + "GeneID:5061529" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58036" + ], + [ + "gene_synonym", + "YP_001165333.1" + ], + [ + "gene_synonym", + "b4621" + ], + [ + "gene_synonym", + "yjbS" + ] + ], + "dna_sequence": "ATGAATATATCATATGTGAATAGCAACAAAACGACATCTTTACCTGTTGAGCTAGATGCACTAAATAATAAAGATATCTCTTATGCCAAAGATTTCTTTTTATACATAGAAACACAGTTAAAAATTGCAAAAGATTTTTTAGACCTGGAGAAGAAGTATCAAGTTCTATTGCAAGTAAAGTTTTTCACGCATTTATTGATTTAG", + "dna_sequence_length": 204, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3971", + "location": [ + [ + "NC_000913", + 4269012, + "-", + 204 + ] + ], + "md5": "9dec15c0f2cecce7a79341974ea23745", + "parent_gene": "", + "protein_md5": "609bcf8ee00026bc83b30f37b3cbcb58", + "protein_translation": "MNISYVNSNKTTSLPVELDALNNKDISYAKDFFLYIETQLKIAKDFLDLEKKYQVLLQVKFFTHLLI", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013283" + ], + [ + "gene_synonym", + "ECK4047" + ], + [ + "gene_synonym", + "EcoGene:EG11934" + ], + [ + "gene_synonym", + "GI:16131881" + ], + [ + "gene_synonym", + "GeneID:948562" + ], + [ + "gene_synonym", + "JW4015" + ], + [ + "gene_synonym", + "NP_418479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE22" + ], + [ + "gene_synonym", + "aphA" + ], + [ + "gene_synonym", + "b4055" + ], + [ + "gene_synonym", + "hobH" + ], + [ + "gene_synonym", + "napA" + ], + [ + "gene_synonym", + "yjbP" + ] + ], + "dna_sequence": "ATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGA", + "dna_sequence_length": 714, + "functions": [ + "acid phosphatase/phosphotransferase, class B, non-specific" + ], + "id": "CDS_3972", + "location": [ + [ + "NC_000913", + 4269414, + "+", + 714 + ] + ], + "md5": "4bf15d0a27e9379f6f54eb1c1737036f", + "parent_gene": "", + "protein_md5": "d303538a3c8771046b84288d4297de26", + "protein_translation": "MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQAPIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013286" + ], + [ + "gene_synonym", + "ECK4048" + ], + [ + "gene_synonym", + "EcoGene:EG11935" + ], + [ + "gene_synonym", + "GI:16131882" + ], + [ + "gene_synonym", + "GeneID:948561" + ], + [ + "gene_synonym", + "JW4017" + ], + [ + "gene_synonym", + "NP_418480.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF48" + ], + [ + "gene_synonym", + "b4056" + ], + [ + "gene_synonym", + "yjbQ" + ] + ], + "dna_sequence": "ATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAA", + "dna_sequence_length": 417, + "functions": [ + "thiamine phosphate synthase" + ], + "id": "CDS_3973", + "location": [ + [ + "NC_000913", + 4270238, + "+", + 417 + ] + ], + "md5": "1d0371d39936cf3c7c854090ef4e88d1", + "parent_gene": "", + "protein_md5": "ab5227f9f7cac5ee0aa61af2bc9c67d5", + "protein_translation": "MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013288" + ], + [ + "gene_synonym", + "ECK4049" + ], + [ + "gene_synonym", + "EcoGene:EG11936" + ], + [ + "gene_synonym", + "GI:16131883" + ], + [ + "gene_synonym", + "GeneID:948560" + ], + [ + "gene_synonym", + "JW4018" + ], + [ + "gene_synonym", + "NP_418481.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF50" + ], + [ + "gene_synonym", + "b4057" + ], + [ + "gene_synonym", + "yjbR" + ] + ], + "dna_sequence": "ATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAGGCGCAGAACAGAGCGTGCATAATGACTGGAAAGCGACGCAGATCAAAGTGGAAGATGTACTGTTTGCGATGGTGAAAGAAGTAGAAAATCGCCCAGCTGTTTCGCTGAAAACCAGCCCGGAGCTGGCGGAGCTGCTACGTCAGCAGCACAGCGATGTGCGTCCAAGCCGCCATCTGAATAAAGCGCACTGGAGCACCGTGTATCTCGACGGTTCGCTGCCAGATTCGCAAATCTATTATCTGGTGGATGCGTCTTATCAGCAGGCGGTGAATTTACTGCCGGAAGAAAAACGTAAATTGCTGGTGCAACTCTGA", + "dna_sequence_length": 357, + "functions": [ + "DUF419 family protein" + ], + "id": "CDS_3974", + "location": [ + [ + "NC_000913", + 4270658, + "+", + 357 + ] + ], + "md5": "d9c758b6a0ec3186c63e511691f8fffa", + "parent_gene": "", + "protein_md5": "831a5687da56a321a6ae8999dc605323", + "protein_translation": "MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013290" + ], + [ + "gene_synonym", + "ECK4050" + ], + [ + "gene_synonym", + "EcoGene:EG11061" + ], + [ + "gene_synonym", + "GI:16131884" + ], + [ + "gene_synonym", + "GeneID:948559" + ], + [ + "gene_synonym", + "JW4019" + ], + [ + "gene_synonym", + "NP_418482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A698" + ], + [ + "gene_synonym", + "b4058" + ], + [ + "gene_synonym", + "dar" + ], + [ + "gene_synonym", + "uvrA" + ] + ], + "dna_sequence": "ATGGATAAGATCGAAGTTCGGGGCGCCCGCACCCATAATCTCAAAAACATCAACCTCGTTATCCCCCGCGACAAGCTCATTGTCGTGACCGGGCTTTCGGGTTCTGGCAAATCCTCGCTCGCTTTCGACACCTTATATGCCGAAGGGCAGCGCCGTTACGTTGAATCCCTTTCCGCCTACGCGCGGCAGTTTCTGTCACTGATGGAAAAGCCGGACGTCGATCATATTGAGGGGCTTTCTCCTGCCATCTCAATTGAGCAGAAATCGACGTCTCATAACCCGCGTTCTACGGTGGGGACAATCACCGAAATCCACGACTATTTGCGTTTGTTATTCGCCCGCGTTGGCGAGCCGCGCTGTCCGGACCACGACGTCCCGCTGGCGGCGCAAACCGTCAGCCAGATGGTGGATAACGTGCTGTCGCAGCCGGAAGGCAAGCGTCTGATGCTACTCGCGCCAATCATTAAAGAGCGCAAAGGCGAACACACCAAAACGCTGGAGAACCTGGCAAGCCAGGGCTACATCCGTGCTCGTATTGATGGCGAAGTCTGCGATCTTTCCGATCCGCCAAAACTGGAACTGCAAAAGAAACATACCATTGAAGTGGTGGTTGATCGCTTCAAGGTGCGTGACGATCTTACCCAACGTCTTGCCGAGTCATTTGAAACCGCGCTGGAGCTTTCCGGTGGTACCGCGGTAGTGGCGGATATGGACGACCCGAAAGCGGAAGAGCTGCTGTTCTCCGCCAACTTCGCCTGCCCAATTTGCGGCTACAGTATGCGTGAACTGGAGCCGCGACTGTTTTCGTTTAACAACCCGGCGGGGGCCTGCCCGACCTGCGACGGCCTTGGCGTACAGCAATATTTCGATCCTGATCGAGTGATCCAGAATCCGGAACTGTCGCTGGCTGGTGGTGCGATCCGTGGCTGGGATCGCCGCAACTTCTATTATTTCCAGATGCTGAAATCGCTGGCAGATCACTATAAGTTCGACGTCGAAGCGCCGTGGGGCAGCCTGAGCGCGAACGTGCATAAAGTGGTGTTGTACGGTTCTGGCAAAGAAAACATTGAATTCAAATACATGAACGATCGTGGCGATACCTCCATTCGTCGTCATCCGTTCGAAGGCGTGCTGCATAATATGGAGCGCCGCTATAAAGAGACGGAATCCAGCGCGGTACGCGAAGAATTAGCCAAGTTTATCAGTAATCGTCCGTGCGCCAGCTGCGAAGGGACGCGTCTGCGTCGGGAAGCGCGCCACGTGTATGTCGAGAATACGCCGCTGCCTGCTATCTCCGACATGAGCATTGGTCATGCGATGGAATTCTTCAACAATCTCAAACTCGCAGGTCAGCGGGCGAAGATTGCAGAAAAAATCCTTAAAGAGATCGGCGATCGTCTGAAATTCCTCGTTAACGTCGGCCTGAATTACCTGACGCTTTCCCGCTCGGCAGAAACGCTTTCTGGCGGTGAAGCACAGCGTATCCGTCTGGCGAGCCAGATTGGTGCGGGCCTGGTTGGCGTTATGTACGTGCTGGACGAGCCGTCTATCGGCCTGCACCAGCGTGATAACGAGCGCCTGTTGGGTACGCTTATCCATCTGCGCGATCTCGGTAATACCGTGATTGTGGTGGAGCACGACGAAGACGCAATTCGCGCCGCTGACCATGTGATCGACATTGGCCCGGGCGCAGGTGTTCACGGCGGTGAAGTGGTCGCAGAAGGTCCGCTGGAAGCGATTATGGCGGTGCCGGAGTCGTTGACCGGGCAGTACATGAGCGGCAAACGCAAGATTGAAGTGCCGAAGAAACGCGTTCCGGCGAATCCGGAAAAAGTGCTGAAGCTGACAGGCGCACGCGGCAACAACCTGAAGGACGTGACGCTGACGCTGCCGGTGGGTCTGTTTACCTGCATCACCGGGGTTTCAGGTTCCGGTAAATCGACGCTGATTAACGACACACTGTTCCCGATTGCCCAACGCCAGTTGAATGGGGCGACCATCGCCGAACCAGCACCGTATCGCGATATTCAGGGGCTGGAGCATTTCGATAAAGTGATCGATATCGACCAAAGCCCAATTGGTCGTACTCCACGTTCTAACCCGGCGACCTATACCGGCGTGTTTACGCCTGTGCGCGAACTGTTTGCGGGCGTACCGGAATCCCGTGCGCGCGGCTATACGCCGGGACGTTTCAGCTTTAACGTTCGTGGCGGACGCTGCGAGGCCTGTCAGGGCGATGGCGTGATCAAAGTGGAGATGCACTTCCTGCCGGATATCTACGTGCCGTGCGACCAGTGCAAAGGTAAACGCTATAACCGTGAAACGCTGGAGATTAAGTACAAAGGCAAAACCATCCACGAAGTGCTGGATATGACCATCGAAGAGGCGCGTGAGTTCTTTGATGCCGTACCTGCACTGGCGCGTAAGCTGCAAACGTTGATGGACGTTGGCCTGACGTACATTCGACTGGGGCAGTCCGCAACCACCCTTTCAGGCGGTGAAGCCCAGCGCGTGAAGCTGGCGCGTGAACTGTCAAAACGCGGCACCGGGCAGACGCTGTATATTCTCGACGAGCCGACCACCGGTCTGCACTTCGCCGATATTCAGCAACTGCTCGACGTACTGCATAAACTGCGCGATCAGGGCAACACCATTGTGGTGATTGAGCACAATCTCGACGTGATCAAAACCGCTGACTGGATTGTCGACCTGGGACCAGAAGGCGGCAGTGGTGGCGGCGAGATCCTCGTCTCCGGTACGCCAGAAACCGTCGCGGAGTGCGAAGCATCACACACGGCACGCTTCCTTAAGCCGATGCTGTAA", + "dna_sequence_length": 2823, + "functions": [ + "ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC" + ], + "id": "CDS_3975", + "location": [ + [ + "NC_000913", + 4273871, + "-", + 2823 + ] + ], + "md5": "fb4bf012337d4d67701b00c04fcd92d5", + "parent_gene": "", + "protein_md5": "1c7ba006096828fb01e4325187699247", + "protein_translation": "MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML", + "protein_translation_length": 940, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013298" + ], + [ + "gene_synonym", + "ECK4051" + ], + [ + "gene_synonym", + "EcoGene:EG10976" + ], + [ + "gene_synonym", + "GI:16131885" + ], + [ + "gene_synonym", + "GeneID:948570" + ], + [ + "gene_synonym", + "JW4020" + ], + [ + "gene_synonym", + "NP_418483.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE0" + ], + [ + "gene_synonym", + "b4059" + ], + [ + "gene_synonym", + "exrB" + ], + [ + "gene_synonym", + "lexC" + ], + [ + "gene_synonym", + "ssb" + ] + ], + "dna_sequence": "ATGGCCAGCAGAGGCGTAAACAAGGTTATTCTCGTTGGTAATCTGGGTCAGGACCCGGAAGTACGCTACATGCCAAATGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAACAGACTGAATGGCACCGCGTTGTGCTGTTCGGCAAACTGGCAGAAGTGGCGAGCGAATATCTGCGTAAAGGTTCTCAGGTTTATATCGAAGGTCAGCTGCGTACCCGTAAATGGACCGATCAATCCGGTCAGGATCGCTACACCACAGAAGTCGTGGTGAACGTTGGCGGCACCATGCAGATGCTGGGTGGTCGTCAGGGTGGTGGCGCTCCGGCAGGTGGCAATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGA", + "dna_sequence_length": 537, + "functions": [ + "single-stranded DNA-binding protein" + ], + "id": "CDS_3976", + "location": [ + [ + "NC_000913", + 4274125, + "+", + 537 + ] + ], + "md5": "59228137841555d721be84fd4c2cec96", + "parent_gene": "", + "protein_md5": "51aaf3dcb27be7b8784c06c1895d0b3c", + "protein_translation": "MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF", + "protein_translation_length": 178, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013300" + ], + [ + "gene_synonym", + "ECK4052" + ], + [ + "gene_synonym", + "EcoGene:EG11937" + ], + [ + "gene_synonym", + "GI:90111681" + ], + [ + "gene_synonym", + "GeneID:948569" + ], + [ + "gene_synonym", + "JW5718" + ], + [ + "gene_synonym", + "NP_418484.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32700" + ], + [ + "gene_synonym", + "b4060" + ], + [ + "gene_synonym", + "yjcB" + ] + ], + "dna_sequence": "ATGGCTACCCTCACCACTGGCGTGGTTCTTCTTCGCTGGCAACTTCTTAGTGCCGTAATGATGTTTCTGGCCAGCACACTCAACATCCGTTTTCGTCGGTCTGATTATGTCGGGCTTGCGGTGATCAGCAGCGGTCTGGGCGTTGTTTCCGCCTGTTGGTTCGCAATGGGGTTGCTTGGCATCACAATGGCGGACATCACCGCTATCTGGCACAACATCGAGTCGGTGATGATAGAAGAGATGAATCAGACACCGCCACAATGGCCAATGATTTTGACCTGA", + "dna_sequence_length": 282, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_3977", + "location": [ + [ + "NC_000913", + 4275041, + "-", + 282 + ] + ], + "md5": "f6294072035538ea6791bf8a60233250", + "parent_gene": "", + "protein_md5": "ac4d484f109c62b1a515953b4e3042a8", + "protein_translation": "MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013309" + ], + [ + "gene_synonym", + "ECK4053" + ], + [ + "gene_synonym", + "EcoGene:EG11938" + ], + [ + "gene_synonym", + "GI:16131887" + ], + [ + "gene_synonym", + "GeneID:948568" + ], + [ + "gene_synonym", + "JW4022" + ], + [ + "gene_synonym", + "NP_418485.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32701" + ], + [ + "gene_synonym", + "b4061" + ], + [ + "gene_synonym", + "yjcC" + ] + ], + "dna_sequence": "ATGAGTCATCGTGCACGACACCAATTACTGGCGTTGCCGGGCATTATCTTTTTAGTTCTCTTTCCCATCATTCTTTCGCTATGGATTGCCTTCCTTTGGGCAAAATCAGAAGTGAATAATCAGCTCCGAACCTTTGCTCAACTGGCACTGGATAAATCCGAGCTGGTCATTCGCCAGGCAGATTTAGTGAGCGATGCAGCTGAACGCTATCAGGGGCAAGTTTGCACTCCAGCCCATCAAAAGCGAATGTTGAATATTATTCGTGGCTATCTTTATATTAATGAATTGATCTATGCCCGTGATAACCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTATCTCCCAAACGTAAATTGCAACGCGCCCTCGAAAAACATCAACTTTGTCTTTATTACCAGCCAATAATCGATATCAAAACAGAAAAATGTATCGGCGCTGAAGCGTTGTTACGTTGGCCTGGTGAGCAGGGGCAAATAATGAATCCGGCAGAGTTTATTCCGCTGGCAGAAAAGGAGGGGATGATAGAACAGATAACTGATTATGTTATTGATAATGTCTTCCGCGATCTGGGCGATTACCTGGCAACACATGCAGATCGCTATGTTTCTATTAACCTGTCGGCCTCCGATTTTCATACGTCACGGTTGATAGCGCGAATCAATCAGAAAACAGAGCAATACGCGGTGCGTCCGCAGCAAATTAAATTTGAAGTGACTGAGCATGCATTTCTTGATGTTGACAAAATGACGCCGATTATTCTGGCTTTCCGCCAGGCAGGTTACGAAGTGGCAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAA", + "dna_sequence_length": 1587, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_3978", + "location": [ + [ + "NC_000913", + 4275471, + "+", + 1587 + ] + ], + "md5": "e0267bbf72ab8d4cc712e13300933551", + "parent_gene": "", + "protein_md5": "1e90af2a760a07849fb213a40f495859", + "protein_translation": "MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFYNHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCIGAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ", + "protein_translation_length": 528, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013311" + ], + [ + "gene_synonym", + "ECK4054" + ], + [ + "gene_synonym", + "EcoGene:EG10958" + ], + [ + "gene_synonym", + "GI:16131888" + ], + [ + "gene_synonym", + "GeneID:948567" + ], + [ + "gene_synonym", + "JW4023" + ], + [ + "gene_synonym", + "NP_418486.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9E2" + ], + [ + "gene_synonym", + "b4062" + ], + [ + "gene_synonym", + "soxS" + ] + ], + "dna_sequence": "ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGAGCATATTGACCAGCCGCTTAACATTGATGTAGTCGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGAATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACATTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTGGGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCTGTAA", + "dna_sequence_length": 324, + "functions": [ + "superoxide response regulon transcriptional activator", + "autoregulator" + ], + "id": "CDS_3979", + "location": [ + [ + "NC_000913", + 4277383, + "-", + 324 + ] + ], + "md5": "4e123c4a71129ec7bef05b29a948a9e2", + "parent_gene": "", + "protein_md5": "777af84098a120aab0a33c6cb4269d71", + "protein_translation": "MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013316" + ], + [ + "gene_synonym", + "ECK4055" + ], + [ + "gene_synonym", + "EcoGene:EG10957" + ], + [ + "gene_synonym", + "GI:16131889" + ], + [ + "gene_synonym", + "GeneID:948566" + ], + [ + "gene_synonym", + "JW4024" + ], + [ + "gene_synonym", + "NP_418487.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS2" + ], + [ + "gene_synonym", + "b4063" + ], + [ + "gene_synonym", + "marC" + ], + [ + "gene_synonym", + "soxR" + ] + ], + "dna_sequence": "ATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTGGACGGATGTATTGGTTGTGGCTGCCTTTCGCGCAGTGATTGCCCGTTGCGTAACCCGGGCGACCGCTTAGGAGAAGAAGGTACCGGCGCACGCTTGCTGGAAGATGAACAAAACTAA", + "dna_sequence_length": 465, + "functions": [ + "redox-sensitive transcriptional activator of soxS", + "autorepressor" + ], + "id": "CDS_3980", + "location": [ + [ + "NC_000913", + 4277469, + "+", + 465 + ] + ], + "md5": "ca5e75100fa5b00aa04d15c844d868dd", + "parent_gene": "", + "protein_md5": "a1a3f0ca97e2d301588bead4f4b7ffac", + "protein_translation": "MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013319" + ], + [ + "gene_synonym", + "ECK4057" + ], + [ + "gene_synonym", + "EcoGene:EG11939" + ], + [ + "gene_synonym", + "GI:16131890" + ], + [ + "gene_synonym", + "GeneID:948565" + ], + [ + "gene_synonym", + "JW4025" + ], + [ + "gene_synonym", + "NP_418488.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF52" + ], + [ + "gene_synonym", + "b4064" + ], + [ + "gene_synonym", + "ghxP" + ], + [ + "gene_synonym", + "yjcD" + ] + ], + "dna_sequence": "ATGTCTACGCCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATGGGTCTGTGGGCTAATCTGCCGTTGGCGATTGGTTGCGCCATCTCCCTGACAGCGTTTACCGCATTCAGCCTGGTGCTGGGGCAACATATTAGCGTACCTGTCGCGCTGGGTGCCGTGTTCCTGATGGGTGTGCTGTTTACGGTAATTTCTGCCACGGGTATCCGTAGCTGGATTTTGCGCAACTTGCCTCACGGTGTGGCGCACGGCACGGGGATTGGTATCGGTCTGTTCCTGCTGCTCATTGCCGCTAACGGTGTCGGTCTGGTGATTAAAAACCCGCTTGATGGTCTGCCCGTTGCGCTGGGTGATTTCGCGACCTTCCCGGTGATTATGTCACTGGTAGGTCTGGCGGTGATCATCGGCCTGGAAAAACTGAAAGTCCCTGGTGGCATTCTGCTGACCATTATCGGTATCTCAATTGTCGGTTTGATCTTCGATCCTAACGTCCATTTCTCCGGCGTTTTCGCCATGCCTTCATTGAGCGATGAAAACGGCAATTCACTGATTGGCAGCCTGGACATTATGGGCGCGCTGAATCCTGTAGTCCTGCCAAGCGTTCTGGCGCTGGTGATGACGGCAGTATTTGATGCCACCGGAACTATCCGTGCCGTCGCCGGCCAGGCGAACCTGCTGGATAAAGATGGGCAGATCATCGACGGTGGGAAAGCACTGACCACTGACTCCATGAGCAGCGTTTTCTCTGGCCTGGTGGGTGCGGCTCCGGCAGCGGTATACATCGAGTCTGCGGCGGGTACGGCGGCGGGCGGTAAAACCGGTTTGACGGCTATCACCGTTGGCGTGCTGTTCCTCCTGATTCTGTTCCTCTCTCCGCTCTCTTACCTCGTTCCGGGGTATGCAACGGCTCCGGCGCTGATGTACGTTGGCCTGCTGATGCTGAGCAACGTGGCGAAAATCGACTTTGCTGATTTTGTTGATGCGATGGCGGGTCTGGTTACGGCTGTATTCATCGTGCTGACCTGTAACATCGTAACAGGCATCATGATCGGCTTCGCGACTCTGGTGATTGGTCGTCTGGTTTCCGGCGAATGGCGCAAGTTGAACATCGGTACGGTCGTTATCGCCGTGGCGCTGGTGACCTTCTATGCGGGTGGCTGGGCTATCTAA", + "dna_sequence_length": 1350, + "functions": [ + "guanine/hypoxanthine permease, high affinity", + "guanine/hypoxanthine:H+ symporter" + ], + "id": "CDS_3981", + "location": [ + [ + "NC_000913", + 4278479, + "+", + 1350 + ] + ], + "md5": "7a57926717f12017a0cefb9f2b756f2b", + "parent_gene": "", + "protein_md5": "2c87aa08ee2ab8b82c0df6ec510cff2c", + "protein_translation": "MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI", + "protein_translation_length": 449, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013323" + ], + [ + "gene_synonym", + "ECK4058" + ], + [ + "gene_synonym", + "EcoGene:EG11940" + ], + [ + "gene_synonym", + "GI:16131891" + ], + [ + "gene_synonym", + "GeneID:948577" + ], + [ + "gene_synonym", + "JW4026" + ], + [ + "gene_synonym", + "NP_418489.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32703" + ], + [ + "gene_synonym", + "b4065" + ], + [ + "gene_synonym", + "yjcE" + ] + ], + "dna_sequence": "ATGGAAATCTTCTTCACCATACTGATAATGACCCTCGTGGTCTCGCTGTCCGGGGTGGTCACTCGTGTCATGCCCTTTCAGATCCCGCTTCCGCTTATGCAAATCGCCATCGGTGCGCTACTGGCGTGGCCGACGTTTGGTTTGCATGTGGAGTTTGATCCTGAACTCTTTTTAGTCTTGTTTATCCCGCCGTTGCTGTTCGCTGATGGCTGGAAAACGCCGACCCGTGAATTTCTCGAACATGGTCGAGAGATTTTCGGCCTCGCGCTGGCGCTGGTGGTGGTCACCGTGGTCGGCATTGGCTTCCTTATTTACTGGGTGGTGCCGGGCATTCCGCTGATCCCTGCCTTTGCGCTGGCGGCGGTGCTTTCTCCGACCGATGCTGTGGCGCTCTCCGGGATTGTTGGCGAAGGGCGCATCCCGAAAAAAATCATGGGCATTTTGCAGGGCGAAGCGTTGATGAATGACGCCTCCGGTCTGGTGTCGTTGAAGTTTGCCGTAGCAGTGGCGATGGGGACGATGATCTTCACCGTCGGCGGTGCGACGGTCGAATTTATGAAAGTAGCCATTGGCGGTATTCTCGCCGGTTTTGTGGTGAGCTGGCTGTACGGTCGCTCGCTGCGATTCCTCAGCCGCTGGGGCGGTGATGAACCCGCGACGCAGATCGTCCTGCTGTTCCTGCTGCCATTCGCTTCTTATCTGATTGCCGAACATATTGGCGTTTCCGGCATCCTCGCTGCGGTTGCCGCCGGGATGACCATCACCCGCTCCGGTGTGATGCGCCGTGCGCCGCTGGCAATGCGCCTGCGTGCAAACAGCACCTGGGCGATGCTGGAATTTGTCTTTAACGGCATGGTGTTCCTGCTGTTAGGTCTGCAGCTGCCGGGTATTCTGGAGACGTCGCTGATGGCAGCAGAAATCGACCCTAACGTCGAAATCTGGATGCTGTTTACCAATATTATTCTGATATATGCGGCGCTGATGCTGGTCCGTTTCGGCTGGCTGTGGACGATGAAAAAGTTCAGCAACCGCTTCCTGAAGAAGAAGCCGATGGAGTTTGGTTCGTGGACCACACGAGAAATCCTGATCGCGTCTTTCGCCGGGGTGCGTGGGGCGATCACTCTGGCCGGTGTGCTCTCTATCCCGCTGCTCTTGCCGGATGGTAACGTCTTCCCGGCGCGCTATGAGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCAGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTGAAAGTTCCGTGCAGGAAGAGAACCTTGAGCGTCGCTTCCGTCTGGCGGCATTGCGTTCTGAACGTGCTGAACTTTACCACCTGCGCGCCACACGGGAGATCAGCAACGAAACGCTGCAAAAATTACTGCACGATCTCGATTTGCTTGAAGCGTTGCTAATTGAGGAAAATCAGTAA", + "dna_sequence_length": 1650, + "functions": [ + "putative cation/proton antiporter" + ], + "id": "CDS_3982", + "location": [ + [ + "NC_000913", + 4279980, + "+", + 1650 + ] + ], + "md5": "5e7ce8bca699303212e07b37d6b1ea2c", + "parent_gene": "", + "protein_md5": "5297cc62ebc9d01aed079cf8878d8337", + "protein_translation": "MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ", + "protein_translation_length": 549, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013325" + ], + [ + "gene_synonym", + "ECK4059" + ], + [ + "gene_synonym", + "EcoGene:EG11941" + ], + [ + "gene_synonym", + "GI:16131892" + ], + [ + "gene_synonym", + "GeneID:948576" + ], + [ + "gene_synonym", + "JW4027" + ], + [ + "gene_synonym", + "NP_418490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32704" + ], + [ + "gene_synonym", + "b4066" + ], + [ + "gene_synonym", + "yjcF" + ] + ], + "dna_sequence": "ATGCGCTATAATGGTTTAAATAATATGTTTTTCCCTCTTTGCCTGATTAACGATAACCACTCTGTCACAAGTCCATCACATACAAAGAAAACAAAATCAGATAATTACAGCAAACATCATAAAAACACGTTAATTGACAATAAAGCCCTCTCTCTTTTCAAAATGGATGATCATGAAAAAGTGATAGGCTTGATTCAGAAAATGAAAAGAATTTATGATAGTTTACCATCAGGAAAAATCACGAAAGAAACGGACAGGAAAATACATAAATATTTTATAGATATAGCTTCACATGCAAATAATAAATGTGACGATAGAATTACGAGAAGAGTTTACCTTAATAAAGATAAGGAAGTGTCAATTAAGGTGGTATATTTTATAAATAATGTCACCGTCCATAATAATACTATCGAAATCCCACAGACAGTAAATGGTGGTTACGATTTTTCACACCTTAGCCTGAAAGGTATCGTGATTAAAGATGAAGATTTATCCAATTCGAATTTTGCAGGTTGCAGACTACAAAACGCTATTTTTCAGGACTGTAATATGTATAAAACGAATTTTAATTTCGCCATAATGGAAAAAATACTTTTTGATAATTGTATTCTCGATGACTCAAATTTCGCTCAGATAAAAATGACTGACGGAACTCTAAATTCATGTTCCGCTATGCATGTTCAATTCTACAATGCAACAATGAATAGAGCCAATATTAAAAATACCTTCCTTGATTATTCAAATTTTTATATGGCATACATGGCTGAGGTAAATCTTTATAAAGTAATAGCGCCATATATTAATTTATTTAGAGCCGACCTTAGCTTCTCTAAACTTGATTTAATTAACTTTGAACATGCTGATCTGTCTCGTGTCAACCTGAATAAAGCAACCCTCCAGAATATAAACTTAATTGATAGCAAACTCTTTTTTACGCGGTTAACAAATACGTTCCTCGAAATGGTTATATGTACCGACTCTAATATGGCTAATGTTAATTTTAATAATGCCAATTTAAGCAATTGCCATTTCAACTGTTCTGTTTTAACAAAAGCCTGGATGTTTAATATCCGTCTCTATCGTGTTAATTTCGATGAGGCTAGCGTCCAGGGAATGGGTATTACCATTCTCCGTGGTGAGGAAAATATCTCCATTAATAGTGATATCCTGGTAACACTACAGAAATTCTTTGAAGAAGATTGTGCCACTCATACTGGCATGTCACAAACTGAGGATAATCTTCATGCAGTCGCTATGAAGATTACTGCAGATATTATGCAAGATGCAGATTGA", + "dna_sequence_length": 1293, + "functions": [ + "pentapeptide repeats protein" + ], + "id": "CDS_3983", + "location": [ + [ + "NC_000913", + 4283075, + "-", + 1293 + ] + ], + "md5": "0b1f3e5089b11ee6916ffd20a7296525", + "parent_gene": "", + "protein_md5": "37cae934a2da9ec0167cd89666d4cdce", + "protein_translation": "MRYNGLNNMFFPLCLINDNHSVTSPSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEKVIGLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASHANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSNFAQIKMTDGTLNSCSAMHVQFYNATMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFEHADLSRVNLNKATLQNINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLSNCHFNCSVLTKAWMFNIRLYRVNFDEASVQGMGITILRGEENISINSDILVTLQKFFEEDCATHTGMSQTEDNLHAVAMKITADIMQDAD", + "protein_translation_length": 430, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013328" + ], + [ + "gene_synonym", + "ECK4060" + ], + [ + "gene_synonym", + "EcoGene:EG11942" + ], + [ + "gene_synonym", + "GI:16131893" + ], + [ + "gene_synonym", + "GeneID:948575" + ], + [ + "gene_synonym", + "JW4028" + ], + [ + "gene_synonym", + "NP_418491.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32705" + ], + [ + "gene_synonym", + "actP" + ], + [ + "gene_synonym", + "b4067" + ], + [ + "gene_synonym", + "yjcG" + ] + ], + "dna_sequence": "ATGAAAAGAGTTCTGACGGCGCTTGCCGCCACACTCCCTTTCGCAGCTAACGCCGCGGATGCTATTAGCGGGGCCGTAGAGCGCCAGCCAACGAACTGGCAGGCGATTATTATGTTCCTGATTTTCGTCGTGTTTACGCTCGGCATTACCTACTGGGCATCAAAACGCGTACGTTCTCGTAGCGACTACTACACCGCAGGCGGCAATATCACTGGCTTCCAGAACGGGCTGGCGATTGCCGGGGACTATATGTCCGCCGCCTCATTCTTGGGGATCTCCGCGCTGGTGTTTACCTCCGGCTATGACGGCTTAATTTACTCGCTGGGCTTCCTGGTGGGCTGGCCGATCATTTTGTTCCTGATTGCCGAACGTCTGCGTAACCTGGGGCGCTACACCTTTGCCGATGTGGCCTCTTACCGTCTGAAACAAGGGCCGATTCGTATTCTTTCGGCCTGTGGTTCTCTGGTGGTGGTGGCGCTTTACCTTATCGCCCAGATGGTGGGCGCAGGTAAACTGATCGAGCTGCTGTTTGGCCTTAACTATCACATTGCGGTGGTGCTGGTCGGCGTGCTGATGATGATGTACGTCCTGTTCGGCGGCATGCTGGCGACCACCTGGGTGCAAATTATCAAAGCCGTGCTGTTGCTGTTCGGTGCCAGCTTTATGGCCTTTATGGTGATGAAACACGTCGGCTTTAGCTTCAACAATCTGTTCAGTGAAGCGATGGCGGTACACCCGAAAGGTGTCGACATCATGAAGCCGGGCGGGCTGGTGAAAGATCCGATCTCCGCGCTCTCTCTGGGTCTGGGACTGATGTTTGGTACGGCGGGCTTGCCGCACATTCTGATGCGCTTCTTTACAGTCAGCGATGCCCGCGAAGCACGTAAGAGCGTGTTCTACGCCACCGGGTTTATGGGCTACTTCTATATTCTGACCTTTATTATCGGCTTCGGCGCGATCATGCTGGTTGGTGCGAATCCGGAATATAAAGACGCGGCGGGCCATCTGATTGGTGGTAACAACATGGCGGCCGTTCACCTGGCGAATGCAGTGGGCGGCAACCTGTTCCTCGGTTTTATTTCAGCGGTTGCTTTCGCCACTATCCTCGCGGTGGTTGCGGGTCTGACGCTGGCGGGCGCATCCGCGGTTTCGCATGACTTGTACGCTAACGTCTTCAAAAAAGGCGCGACCGAACGTGAAGAGCTGCGGGTATCAAAAATCACCGTACTGATCCTCGGCGTGATTGCGATTATCCTCGGCGTGCTGTTTGAGAATCAGAACATCGCCTTTATGGTGGGGCTGGCGTTTGCCATCGCGGCGAGCTGTAACTTCCCGATCATTCTGCTTTCTATGTACTGGTCGAAACTGACCACGCGTGGCGCGATGATGGGTGGCTGGCTGGGGCTGATTACCGCAGTAGTACTGATGATCCTCGGCCCGACGATTTGGGTACAGATCCTTGGTCACGAAAAAGCCATCTTCCCGTATGAATACCCGGCGCTGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTTGGCGTTGAGCAAGGCCGCGCGCATTAA", + "dna_sequence_length": 1650, + "functions": [ + "acetate transporter" + ], + "id": "CDS_3984", + "location": [ + [ + "NC_000913", + 4284902, + "-", + 1650 + ] + ], + "md5": "fe7b3c35ee19aee598984d20886a8425", + "parent_gene": "", + "protein_md5": "09027cec46ad382a3a6658eb9b92b207", + "protein_translation": "MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATEREELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH", + "protein_translation_length": 549, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013330" + ], + [ + "gene_synonym", + "ECK4061" + ], + [ + "gene_synonym", + "EcoGene:EG11943" + ], + [ + "gene_synonym", + "GI:16131894" + ], + [ + "gene_synonym", + "GeneID:948574" + ], + [ + "gene_synonym", + "JW4029" + ], + [ + "gene_synonym", + "NP_418492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF54" + ], + [ + "gene_synonym", + "b4068" + ], + [ + "gene_synonym", + "yjcH" + ] + ], + "dna_sequence": "ATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTTGCCACCATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGGCACGCCGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCAATTGGTGTTGGAGTGATTGTGATCTCCTTTGTTCTCACCGGTATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA", + "dna_sequence_length": 315, + "functions": [ + "DUF485 family inner membrane protein" + ], + "id": "CDS_3985", + "location": [ + [ + "NC_000913", + 4285213, + "-", + 315 + ] + ], + "md5": "7ffac60ec9e851690a1d49c3eddc70cd", + "parent_gene": "", + "protein_md5": "f0ca57b7d8601f2a5ccdf27978c77e4d", + "protein_translation": "MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013337" + ], + [ + "gene_synonym", + "ECK4062" + ], + [ + "gene_synonym", + "EcoGene:EG11448" + ], + [ + "gene_synonym", + "GI:16131895" + ], + [ + "gene_synonym", + "GeneID:948572" + ], + [ + "gene_synonym", + "JW4030" + ], + [ + "gene_synonym", + "NP_418493.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27550" + ], + [ + "gene_synonym", + "acs" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "b4069" + ], + [ + "gene_synonym", + "yfaC" + ] + ], + "dna_sequence": "ATGAGCCAAATTCACAAACACACCATTCCTGCCAACATCGCAGACCGTTGCCTGATAAACCCTCAGCAGTACGAGGCGATGTATCAACAATCTATTAACGTACCTGATACCTTCTGGGGCGAACAGGGAAAAATTCTTGACTGGATCAAACCTTACCAGAAGGTGAAAAACACCTCCTTTGCCCCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCAAGAAAACGGCGATCGTACCGCCATCATCTGGGAAGGCGACGACGCCAGCCAGAGCAAACATATCAGCTATAAAGAGCTGCACCGCGACGTCTGCCGCTTCGCCAATACCCTGCTCGAGCTGGGCATTAAAAAAGGTGATGTGGTGGCGATTTATATGCCGATGGTGCCGGAAGCCGCGGTTGCGATGCTGGCCTGCGCCCGCATTGGCGCGGTGCATTCGGTGATTTTCGGCGGCTTCTCGCCGGAAGCCGTTGCCGGGCGCATTATTGATTCCAACTCACGACTGGTGATCACTTCCGACGAAGGTGTGCGTGCCGGGCGCAGTATTCCGCTGAAGAAAAACGTTGATGACGCGCTGAAAAACCCGAACGTCACCAGCGTAGAGCATGTGGTGGTACTGAAGCGTACTGGCGGGAAAATTGACTGGCAGGAAGGGCGCGACCTGTGGTGGCACGACCTGGTTGAGCAAGCGAGCGATCAGCACCAGGCGGAAGAGATGAACGCCGAAGATCCGCTGTTTATTCTCTACACCTCCGGTTCTACCGGTAAGCCAAAAGGTGTGCTGCATACTACCGGCGGTTATCTGGTGTACGCGGCGCTGACCTTTAAATATGTCTTTGATTATCATCCGGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCCCGCTGGCCTGCGGTGCGACCACGCTGATGTTTGAAGGCGTACCCAACTGGCCGACGCCTGCCCGTATGGCGCAGGTGGTGGACAAGCATCAGGTCAATATTCTCTATACCGCACCCACGGCGATCCGCGCGCTGATGGCGGAAGGCGATAAAGCGATCGAAGGCACCGACCGTTCGTCGCTGCGCATTCTCGGTTCCGTGGGCGAGCCAATTAACCCGGAAGCGTGGGAGTGGTACTGGAAAAAAATCGGCAACGAGAAATGTCCGGTGGTCGATACCTGGTGGCAGACCGAAACCGGCGGTTTCATGATCACCCCGCTGCCTGGCGCTACCGAGCTGAAAGCCGGTTCGGCAACACGTCCGTTCTTCGGCGTGCAACCGGCGCTGGTCGATAACGAAGGTAACCCGCTGGAGGGGGCCACCGAAGGTAGCCTGGTAATCACCGACTCCTGGCCGGGTCAGGCGCGTACGCTGTTTGGCGATCACGAACGTTTTGAACAGACCTACTTCTCCACCTTCAAAAATATGTATTTCAGCGGCGACGGCGCGCGTCGCGATGAAGATGGCTATTACTGGATAACCGGGCGTGTGGACGACGTGCTGAACGTCTCCGGTCACCGTCTGGGGACGGCAGAGATTGAGTCGGCGCTGGTGGCGCATCCGAAGATTGCCGAAGCCGCCGTAGTAGGTATTCCGCACAATATTAAAGGTCAGGCGATCTACGCCTACGTCACGCTTAATCACGGGGAGGAACCGTCACCAGAACTGTACGCAGAAGTCCGCAACTGGGTGCGTAAAGAGATTGGCCCGCTGGCGACGCCAGACGTGCTGCACTGGACCGACTCCCTGCCTAAAACCCGCTCCGGCAAAATTATGCGCCGTATTCTGCGCAAAATTGCGGCGGGCGATACCAGCAACCTGGGCGATACCTCGACGCTTGCCGATCCTGGCGTAGTCGAGAAGCTGCTTGAAGAGAAGCAGGCTATCGCGATGCCATCGTAA", + "dna_sequence_length": 1959, + "functions": [ + "acetyl-CoA synthetase" + ], + "id": "CDS_3986", + "location": [ + [ + "NC_000913", + 4287371, + "-", + 1959 + ] + ], + "md5": "6c84e10d1cf6ed36d4d6c21b997d38a3", + "parent_gene": "", + "protein_md5": "3e6c64958fff1169846d0e965cdd2dfe", + "protein_translation": "MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGKILDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDLVEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS", + "protein_translation_length": 652, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013342" + ], + [ + "gene_synonym", + "ECK4063" + ], + [ + "gene_synonym", + "EcoGene:EG11781" + ], + [ + "gene_synonym", + "GI:16131896" + ], + [ + "gene_synonym", + "GeneID:948571" + ], + [ + "gene_synonym", + "JW4031" + ], + [ + "gene_synonym", + "NP_418494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK9" + ], + [ + "gene_synonym", + "b4070" + ], + [ + "gene_synonym", + "nrfA" + ] + ], + "dna_sequence": "ATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTACAACAAGCCGCGTGGACATGCTTTTGCTGTGACCGATGTGCGTGAAACCCTGCGTACCGGTGCGCCGAAAAACGCTGAAGATGGTCCGCTACCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAACTCTACACCGACCATAAAATTGGTAATCCGTTTGATAACTTCGCCCAGACTTGTGCGAACTGCCATACCCAGGACAAAGCTGCCTTGCAAAAAGTGGTCGCGGAACGTAAGCAGTCGATTAACGACCTGAAAATCAAGGTTGAAGATCAACTGGTTCACGCTCACTTCGAAGCGAAAGCAGCGCTGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAA", + "dna_sequence_length": 1437, + "functions": [ + "nitrite reductase, formate-dependent, cytochrome" + ], + "id": "CDS_3987", + "location": [ + [ + "NC_000913", + 4287764, + "+", + 1437 + ] + ], + "md5": "67ff530e4ae3bf237e54b4f2cfea1879", + "parent_gene": "", + "protein_md5": "e13efccbda7c00032fa306b56f27c2f1", + "protein_translation": "MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNETFAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQIKAEKQDFIKTVIPQWEEQARKNGLLSQ", + "protein_translation_length": 478, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013344" + ], + [ + "gene_synonym", + "ECK4064" + ], + [ + "gene_synonym", + "EcoGene:EG11945" + ], + [ + "gene_synonym", + "GI:90111682" + ], + [ + "gene_synonym", + "GeneID:948573" + ], + [ + "gene_synonym", + "JW4032" + ], + [ + "gene_synonym", + "NP_418495.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABL1" + ], + [ + "gene_synonym", + "b4071" + ], + [ + "gene_synonym", + "nrfB" + ], + [ + "gene_synonym", + "yjcI" + ] + ], + "dna_sequence": "ATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTACGAAGTTACCCAGCAGCGTAACCCGGATGCCGCCTGTCTGGACTGTCATAAACCAGATACCGAAGGTATGCATGGAAAACATGCTTCCGTTATCAACCCGAATAACAAACTGCCGGTCACCTGCACCAACTGTCACGGCCAGCCATCACCGCAACACCGCGAAGGGGTGAAAGATGTGATGCGCTTTAACGAGCCGATGTACAAGGTTGGAGAGCAGAACAGCGTCTGTATGTCCTGTCATCTGCCGGAACAGTTGCAAAAAGCGTTCTGGCCGCACGATGTCCACGTAACCAAAGTGGCGTGCGCCAGCTGCCATTCCCTGCATCCACAGCAAGATACGATGCAGACGTTAAGTGACAAAGGACGGATTAAGATTTGCGTCGATTGCCACAGCGATCAGCGCACCAATCCGAACTTTAACCCGGCGTCTGTTCCGTTGCTTAAGGAGCAGCCATGA", + "dna_sequence_length": 567, + "functions": [ + "nitrite reductase, formate-dependent, penta-heme cytochrome c" + ], + "id": "CDS_3988", + "location": [ + [ + "NC_000913", + 4289245, + "+", + 567 + ] + ], + "md5": "677f1bac54806473886c7c8e65bbdac2", + "parent_gene": "", + "protein_md5": "56c2b65966dc23b88adfd8defa8ea2d7", + "protein_translation": "MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013346" + ], + [ + "gene_synonym", + "ECK4065" + ], + [ + "gene_synonym", + "EcoGene:EG11946" + ], + [ + "gene_synonym", + "GI:16131898" + ], + [ + "gene_synonym", + "GeneID:948581" + ], + [ + "gene_synonym", + "JW4033" + ], + [ + "gene_synonym", + "NP_418496.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAK7" + ], + [ + "gene_synonym", + "b4072" + ], + [ + "gene_synonym", + "nrfC" + ], + [ + "gene_synonym", + "yjcJ" + ] + ], + "dna_sequence": "ATGACCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGCGTGCTGGCAGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGCGAAAACGTTGAATATCAATGGGGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGGATGCTTGTCGGGAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTTCCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCATGCGCCGTGCGTTGACGTCTGCCCGACCGGTGCGTCTTTTCGCGATGCTGCCAGTGGGATTGTCGATGTTAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCGCCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACGGCGGACAAATGCGATTTCTGCCGTAAGACCAATTTGCAGGCCGGTAAGTTGCCCGCGTGCGTTGAAGCTTGCCCGACCAAGGCGCTGACGTTTGGCAATCTGGACGATCCCAACAGTGAGATTTCGCAACTGCTGCGCCAGAAGCCCACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCGTACCGTTTAAATACGGGGAGGTGAGCCAATGA", + "dna_sequence_length": 672, + "functions": [ + "formate-dependent nitrite reductase, 4Fe4S subunit" + ], + "id": "CDS_3989", + "location": [ + [ + "NC_000913", + 4289808, + "+", + 672 + ] + ], + "md5": "c3d281a5d2aeb20dd6e2043d4ab1da35", + "parent_gene": "", + "protein_md5": "a06991b1dd66dc90411c3b5c494dd250", + "protein_translation": "MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013348" + ], + [ + "gene_synonym", + "ECK4066" + ], + [ + "gene_synonym", + "EcoGene:EG11947" + ], + [ + "gene_synonym", + "GI:16131899" + ], + [ + "gene_synonym", + "GeneID:948580" + ], + [ + "gene_synonym", + "JW4034" + ], + [ + "gene_synonym", + "NP_418497.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32709" + ], + [ + "gene_synonym", + "b4073" + ], + [ + "gene_synonym", + "nrfD" + ], + [ + "gene_synonym", + "yjcK" + ] + ], + "dna_sequence": "ATGACGCAGACTTCCGCATTTCATTTTGAATCGCTGGTGTGGGACTGGCCGATTGCCATCTACCTGTTTTTGATTGGTATTTCTGCTGGTCTGGTGACGCTGGCCGTGCTGTTACGTCGCTTCTACCCGCAGGCGGGCGGTGCAGACAGTACGTTGCTGCGCACCACGCTGATTGTCGGGCCGGGCGCGGTGATCCTCGGTCTGTTGATCCTCGTCTTCCACCTGACAAGACCGTGGACCTTCTGGAAGCTGATGTTCCACTACAGTTTTACCTCGGTGATGTCGATGGGGGTGATGCTGTTTCAGCTCTACATGGTGGTGCTGGTGCTGTGGCTGGCGAAAATCTTTGAACATGATTTGCTTGCCCTGCAACAACGCTGGTTGCCGAAGCTGGGGATCGTGCAAAAGGTTCTGAGCCTGCTGACGCCCGTTCATCGCGGACTGGAAACATTGATGCTGGTGCTGGCGGTGTTGTTGGGGGCTTATACCGGCTTTCTGCTGTCGGCGCTGAAATCGTATCCGTTCCTCAATAACCCGATCCTGCCGGTGCTGTTCCTCTTCTCCGGCATCTCGTCCGGTGCGGCGGTGGCGCTGATCGCCATGGCGATACGCCAACGCAGTAACCCGCATTCCACGGAAGCGCAGTTTGTACACCGTATGGAAATCCCTGTGGTATGGGGTGAAATCTTCCTGCTGGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGTGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCTGCCGTGCTGGCGGCGTGTGGGGCCAGTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAA", + "dna_sequence_length": 957, + "functions": [ + "formate-dependent nitrite reductase, membrane subunit" + ], + "id": "CDS_3990", + "location": [ + [ + "NC_000913", + 4290476, + "+", + 957 + ] + ], + "md5": "f25b2fade389f6daa714ee51de7a6e8b", + "parent_gene": "", + "protein_md5": "4c5f4baae01c3a4aad050156769fbd96", + "protein_translation": "MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQAGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQLYMVVLVLWLAKIFEHDLLALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLGAYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAQFVHRMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013350" + ], + [ + "gene_synonym", + "ECK4067" + ], + [ + "gene_synonym", + "EcoGene:EG11948" + ], + [ + "gene_synonym", + "GI:16131900" + ], + [ + "gene_synonym", + "GeneID:948579" + ], + [ + "gene_synonym", + "JW4035" + ], + [ + "gene_synonym", + "NP_418498.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32710" + ], + [ + "gene_synonym", + "b4074" + ], + [ + "gene_synonym", + "nrfE" + ], + [ + "gene_synonym", + "yjcL" + ] + ], + "dna_sequence": "GTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGATTTCTCGGTCATTTATGTCGCGCAACATAGCTATAGCCTGCTGTCGTGGGAACTCAAGCTGGCAGCGGTGTGGGGCGGCCATGAAGGTTCGCTGCTGCTTTGGGTGCTGCTGCTTTCCGCCTGGAGCGCGCTGTTTGCCTGGCATTATCGGCAGCAAACCGATCCGCTATTTCCGCTGACGTTAGCCGTTTTATCTCTCATGCTCGCCGCACTGCTACTGTTTGTGGTGCTGTGGTCCGATCCCTTCGTGCGGATATTTCCACCAGCAATCGAAGGCCGCGATCTCAATCCGATGCTGCAACATCCCGGTCTTATCTTTCATCCACCGCTGCTTTACCTTGGCTATGGCGGTTTGATGGTAGCGGCGAGCGTGGCGCTGGCGAGTCTACTGCGCGGCGAGTTTGATGGTGCCTGCGCCCGAATTTGCTGGCGCTGGGCGTTACCTGGCTGGAGTGCATTAACGGCGGGGATCATCCTCGGTTCCTGGTGGGCCTACTGCGAACTCGGCTGGGGCGGCTGGTGGTTCTGGGATCCGGTGGAAAACGCCTCTTTATTACCCTGGCTTTCTGCCACTGCGCTGCTGCACAGTTTGTCCCTGACACGCCAGCGGGGGATTTTTTGCCACTGGTCGCTGTTGCTGGCGATAGTTACTCTGATGCTGTCGCTGCTGGGCACCTTAATTGTCCGTTCTGGCATTCTGGTTTCGGTTCATGCGTTCGCGCTGGATAACGTCCGCGCCGTGCCGTTGTTCAGCCTGTTTGCACTGATTAGCCTTGCGTCTCTGGCTCTGTATGGCTGGCGAGCGCGGGACGGTGGCCCGGCGGTGCATTTTTCGGGGTTATCGCGGGAAATGTTAATCCTCGCTACGCTGTTGCTGTTTTGCGCAGTGCTACTGATCGTGCTGGTGGGAACGCTTTATCCGATGATTTACGGCCTGCTGGGCTGGGGACGCCTCTCCGTTGGCGCGCCGTATTTTAACCGCGCGACGTTACCGTTTGGTCTGTTGATGCTGGTGGTGATTGTGCTGGCGACGTTTGTCTCTGGCAAACGCGTGCAGCTTCCGGCGCTGGTAGCTCATGCGGGCGTGCTGTTATTTGCCGCTGGGGTCGTGGTCTCCAGCGTCAGCCGTCAGGAGATCAGCCTGAATTTACAGCCGGGTCAGCAGGTGACGCTGGCAGGATACACCTTCCGTTTTGAGTGCCTCGATCTACAAGCCAAAGGCAATTACACCAGCGAAAAAGCGATAGTGGCACTGTTTGACCATCAGCAACGCATTGGTGAACTGACGCCGGAGCGGCGTTTTTATGAAGCACGCCGTCAACAAATGATGGAACCGTCAATTCGCTGGAACGGCATCCATGACTGGTATGCGGTCATGGGGGAGAAAACTGGGCCGGATCGTTACGCTTTTCGTTTGTATGTACAAAGCGGTGTGCGCTGGATCTGGGGGGGAGGATTGTTGATGATTGCGGGCGCATTGTTAAGCGGATGGCGGGGGAAGAAGCGCGATGAATAA", + "dna_sequence_length": 1659, + "functions": [ + "heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE" + ], + "id": "CDS_3991", + "location": [ + [ + "NC_000913", + 4291512, + "+", + 1659 + ] + ], + "md5": "29dc7658d46e6481a200f4dcedff55e0", + "parent_gene": "", + "protein_md5": "88716ac646942ce252457d6a5d15ad7b", + "protein_translation": "MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE", + "protein_translation_length": 552, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013352" + ], + [ + "gene_synonym", + "ECK4068" + ], + [ + "gene_synonym", + "EcoGene:EG11949" + ], + [ + "gene_synonym", + "GI:16131901" + ], + [ + "gene_synonym", + "GeneID:948578" + ], + [ + "gene_synonym", + "JW4036" + ], + [ + "gene_synonym", + "NP_418499.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32711" + ], + [ + "gene_synonym", + "b4075" + ], + [ + "gene_synonym", + "nrfF" + ], + [ + "gene_synonym", + "yjcM" + ] + ], + "dna_sequence": "ATGAATAAAGGGCTTCTCACGCTACTGCTGTTATTTACCTGTTTTGCGCACGCTCAGGTCGTAGACACCTGGCAATTCGCCAATCCGCAACAACAGCAACAGGCGTTAAATATTGCCAGCCAGTTACGTTGTCCGCAGTGCCAGAATCAAAACTTACTGGAATCCAACGCGCCGGTGGCTGTCAGTATGCGCCATCAGGTTTACAGCATGGTGGCGGAGGGGAAGAACGAAGTCGAAATCATTGGCTGGATGACCGAACGCTACGGAGATTTTGTTCGCTATAACCCACCGTTAACGGGTCAGACGCTGGTGTTATGGGCGCTGCCAGTGGTGTTGTTACTGCTGATGGCACTGATCCTCTGGCGAGTGAGGGCGAAGCGATGA", + "dna_sequence_length": 384, + "functions": [ + "heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF" + ], + "id": "CDS_3992", + "location": [ + [ + "NC_000913", + 4293163, + "+", + 384 + ] + ], + "md5": "d58274be1cfdbd6a33fd8d345407252c", + "parent_gene": "", + "protein_md5": "16053c58aa51599865e840b04f373a29", + "protein_translation": "MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013354" + ], + [ + "gene_synonym", + "ECK4069" + ], + [ + "gene_synonym", + "EcoGene:EG11950" + ], + [ + "gene_synonym", + "GI:16131902" + ], + [ + "gene_synonym", + "GeneID:948592" + ], + [ + "gene_synonym", + "JW4037" + ], + [ + "gene_synonym", + "NP_418500.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32712" + ], + [ + "gene_synonym", + "aidC" + ], + [ + "gene_synonym", + "b4076" + ], + [ + "gene_synonym", + "nrfG" + ], + [ + "gene_synonym", + "yjcN" + ] + ], + "dna_sequence": "ATGAAACAGCCCAAAATACCGGTGAAAATGCTGACAACACTCACGATATTGATGGTATTTCTCTGTGTCGGCAGTTATCTGTTAAGCCCAAAATGGCAGGCGGTACGTGCGGAGTATCAGCGTCAGCGCGATCCGCTACATCAGTTTGCCAGCCAGCAAACCCCGGAAGCGCAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAA", + "dna_sequence_length": 597, + "functions": [ + "heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG" + ], + "id": "CDS_3993", + "location": [ + [ + "NC_000913", + 4293543, + "+", + 597 + ] + ], + "md5": "a5daead409a79a48b4bc2c894ae4d026", + "parent_gene": "", + "protein_md5": "4921688520da0bfe7ce37b89ea747542", + "protein_translation": "MKQPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVRAEYQRQRDPLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRVNRTQLVESINMAKLLQRRLD", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013357" + ], + [ + "gene_synonym", + "ECK4070" + ], + [ + "gene_synonym", + "EcoGene:EG10405" + ], + [ + "gene_synonym", + "GI:16131903" + ], + [ + "gene_synonym", + "GeneID:948591" + ], + [ + "gene_synonym", + "JW4038" + ], + [ + "gene_synonym", + "NP_418501.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21345" + ], + [ + "gene_synonym", + "b4077" + ], + [ + "gene_synonym", + "gltP" + ] + ], + "dna_sequence": "ATGAAAAATATAAAATTCAGCCTGGCCTGGCAGATTCTGTTTGCTATGGTGCTGGGCATTCTCCTGGGAAGCTACCTGCACTACCATAGCGACAGCCGCGACTGGCTGGTCGTCAATTTGCTCTCTCCGGCGGGTGATATCTTCATCCATCTGATTAAAATGATTGTTGTGCCGATTGTGATCTCCACGCTGGTGGTGGGTATCGCGGGTGTTGGTGATGCCAAACAGCTCGGGCGTATTGGCGCGAAAACCATTATCTACTTCGAGGTGATCACCACCGTCGCCATCATTTTGGGGATCACTCTGGCGAACGTCTTCCAGCCCGGTGCCGGGGTGGATATGTCGCAGTTGGCGACCGTCGATATCTCGAAATATCAGAGCACTACGGAAGCGGTACAAAGCAGTTCCCACGGCATTATGGGCACGATTTTGTCGCTGGTGCCGACGAACATTGTGGCGTCGATGGCGAAAGGCGAAATGCTGCCGATCATCTTTTTCTCGGTGCTGTTTGGTCTGGGGCTTTCTTCCCTGCCCGCGACGCATCGTGAACCGCTGGTGACCGTGTTCCGCTCCATCTCTGAAACCATGTTTAAAGTGACTCACATGGTGATGCGTTATGCACCGGTGGGTGTGTTTGCGCTGATTGCGGTGACGGTGGCTAACTTTGGTTTCTCGTCTCTGTGGCCACTGGCGAAACTGGTGCTGCTGGTGCATTTCGCCATTCTGTTCTTCGCGCTGGTAGTGCTGGGAATTGTGGCGCGCCTGTGCGGGTTAAGCGTCTGGATCCTGATTCGTATTCTGAAAGATGAGCTGATTCTGGCGTACTCCACTGCCAGCTCTGAAAGCGTGCTGCCGCGAATTATTGAGAAGATGGAAGCCTACGGAGCACCGGTGTCGATCACCAGTTTCGTGGTGCCGACCGGTTACTCTTTTAACCTTGATGGTTCGACGCTGTATCAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAACGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAA", + "dna_sequence_length": 1314, + "functions": [ + "glutamate/aspartate:proton symporter" + ], + "id": "CDS_3994", + "location": [ + [ + "NC_000913", + 4294481, + "+", + 1314 + ] + ], + "md5": "37900f7f7dcefd6bc2eab2a9a749ec1d", + "parent_gene": "", + "protein_md5": "ba9cb03bc99686ab9293c29d1d43315e", + "protein_translation": "MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPVSITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ", + "protein_translation_length": 437, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013360" + ], + [ + "gene_synonym", + "ECK4071" + ], + [ + "gene_synonym", + "EcoGene:EG11951" + ], + [ + "gene_synonym", + "GI:16131904" + ], + [ + "gene_synonym", + "GeneID:948586" + ], + [ + "gene_synonym", + "JW4039" + ], + [ + "gene_synonym", + "NP_418502.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF56" + ], + [ + "gene_synonym", + "b4078" + ], + [ + "gene_synonym", + "yjcO" + ] + ], + "dna_sequence": "ATGAAAAAAATTATCGCATTGATGTTGTTTTTGACATTCTTTGCCCACGCCAACGACTCCGAGCCTGGCAGCCAGTATTTAAAGGCAGCAGAGGCCGGGGACCGACGCGCACAATATTTTCTTGCCGACAGCTGGTTTAGCTCCGGCGATTTGAGCAAAGCCGAATATTGGGCACAGAAAGCCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCGCAGATCAAAATCACCAATCCGGTCAGTCTGGACTATCCACAAGCAAAAGTTCTTGCAGAGAAAGCGGCGCAAGCGGGCAGTAAAGAAGGTGAAGTAACGCTGGCGCATATTCTGGTAAATACTCAAGCGGGTAAACCGGATTATCCAAAGGCAATTTCGCTGTTAGAAAACGCCTCGGAAGATCTGGAGAACGACTCTGCCGTCGATGCCCAAATGCTGCTTGGTTTGATTTACGCCAACGGCGTGGGCATTAAGGCCGACGATGACAAGGCAACCTGGTATTTCAAACGCAGCTCTGCAATTTCCCGAACCGGTTATTCCGAGTACTGGGCGGGAATGATGTTCTTAAACGGTGAAGAAGGTTTTATCGAGAAGAACAAGCAAAAGGCGCTGCACTGGTTGAACCTGAGCTGTATGGAAGGGTTTGATACCGGGTGTGAAGAGTTTGAAAAATTAACCAACGGTTAA", + "dna_sequence_length": 690, + "functions": [ + "Sel1 family TPR-like repeat protein" + ], + "id": "CDS_3995", + "location": [ + [ + "NC_000913", + 4297125, + "-", + 690 + ] + ], + "md5": "9a1c58b4c773a44437d2d4c138f90949", + "parent_gene": "", + "protein_md5": "c1956ba4f44fc32d2743103cc50fac91", + "protein_translation": "MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013363" + ], + [ + "gene_synonym", + "ECK4072" + ], + [ + "gene_synonym", + "EcoGene:EG10285" + ], + [ + "gene_synonym", + "GI:16131905" + ], + [ + "gene_synonym", + "GeneID:948584" + ], + [ + "gene_synonym", + "JW4040" + ], + [ + "gene_synonym", + "NP_418503.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07658" + ], + [ + "gene_synonym", + "b4079" + ], + [ + "gene_synonym", + "fdhF" + ] + ], + "dna_sequence": "ATGAAAAAAGTCGTCACGGTTTGCCCCTATTGCGCATCAGGTTGCAAAATCAACCTGGTCGTCGATAACGGCAAAATCGTCCGGGCGGAGGCAGCGCAGGGGAAAACCAACCAGGGTACCCTGTGTCTGAAGGGTTATTATGGCTGGGACTTCATTAACGATACCCAGATCCTGACCCCGCGCCTGAAAACCCCCATGATCCGTCGCCAGCGTGGCGGCAAACTCGAACCTGTTTCCTGGGATGAGGCACTGAATTACGTTGCCGAGCGCCTGAGCGCCATCAAAGAGAAGTACGGTCCGGATGCCATCCAGACGACCGGCTCCTCGCGTGGTACGGGTAACGAAACCAACTATGTAATGCAAAAATTTGCGCGCGCCGTTATTGGTACCAATAACGTTGACTGCTGCGCTCGTGTCTGACACGGCCCATCGGTTGCAGGTCTGCACCAATCGGTCGGTAATGGCGCAATGAGCAATGCTATTAACGAAATTGATAATACCGATTTAGTGTTCGTTTTCGGGTACAACCCGGCGGATTCCCACCCAATCGTGGCGAATCACGTAATTAACGCTAAACGTAACGGGGCGAAAATTATCGTCTGCGATCCGCGCAAAATTGAAACCGCGCGCATTGCTGACATGCACATTGCACTGAAAAACGGCTCGAACATCGCGCTGTTGAATGCGATGGGCCATGTCATTATTGAAGAAAATCTGTACGACAAAGCGTTCGTCGCTTCACGTACAGAAGGCTTTGAAGAGTATCGTAAAATCGTTGAAGGCTACACGCCGGAGTCGGTTGAAGATATCACCGGCGTCAGCGCCAGTGAGATTCGTCAGGCGGCACGGATGTATGCCCAGGCGAAAAGCGCCGCCATCCTGTGGGGCATGGGTGTAACCCAGTTCTACCAGGGCGTGGAAACCGTGCGTTCTCTGACCAGCCTCGCGATGCTGACCGGTAACCTCGGTAAGCCGCATGCGGGTGTTAACCCGGTTCGTGGTCAGAACAACGTTCAGGGTGCCTGCGATATGGGCGCGCTGCCGGATACGTATCCGGGATACCAGTACGTGAAAGATCCGGCTAACCGCGAGAAATTCGCCAAAGCCTGGGGCGTGGAAAGCCTGCCAGCGCATACCGGCTATCGCATCAGCGAGCTGCCGCACCGCGCAGCGCATGGCGAAGTGCGTGCCGCGTACATTATGGGCGAAGATCCGCTACAAACTGACGCGGAGCTGTCGGCAGTACGTAAAGCCTTTGAAGATCTGGAACTGGTTATCGTTCAGGACATCTTTATGACCAAAACCGCGTCGGCGGCGGATGTTATTTTACCGTCAACGTCGTGGGGCGAGCATGAAGGCGTGTTTACTGCGGCTGACCGTGGCTTCCAGCGTTTCTTCAAGGCGGTTGAACCGAAATGGGATCTGAAAACGGACTGGCAAATCATCAGTGAAATCGCCACCCGTATGGGTTATCCGATGCACTACAACAACACCCAGGAGATCTGGGATGAGTTGCGTCATCTGTGCCCGGATTTCTACGGTGCGACTTACGAGAAAATGGGCGAACTGGGCTTCATTCAGTGGCCTTGCCGCGATACTTCAGATGCCGATCAGGGGACTTCTTATCTGTTTAAAGAGAAGTTTGATACCCCGAACGGTCTGGCGCAGTTCTTCACCTGCGACTGGGTAGCGCCAATCGACAAACTCACCGACGAGTACCCGATGGTACTGTCAACGGTGCGTGAAGTTGGTCACTACTCTTGCCGTTCGATGACCGGTAACTGTGCGGCACTGGCGGCGCTGGCTGATGAACCTGGCTACGCACAAATCAATACCGAAGACGCCAAACGTCTGGGTATTGAAGATGAGGCATTGGTTTGGGTGCACTCGCGTAAAGGCAAAATTATCACCCGTGCGCAGGTCAGCGATCGTCCGAACAAAGGGGCGATTTACATGACCTACCAGTGGTGGATTGGTGCCTGTAACGAGCTGGTTACCGAAAACTTAAGCCCGATTACGAAAACGCCGGAGTACAAATACTGCGCCGTTCGCGTCGAGCCGATCGCCGATCAGCGCGCCGCCGAGCAGTACGTGATTGACGAGTACAACAAGTTGAAAACTCGCCTGCGCGAAGCGGCACTGGCGTAA", + "dna_sequence_length": 2148, + "functions": [ + "formate dehydrogenase-H, selenopolypeptide subunit" + ], + "id": "CDS_3996", + "location": [ + [ + "NC_000913", + 4299366, + "-", + 2148 + ] + ], + "md5": "c1d03d22a77ec9c8c90e3249668f24c5", + "parent_gene": "", + "protein_md5": "dae7698bc1ca57518d5743f81222b6e7", + "protein_translation": "MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA", + "protein_translation_length": 715, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013366" + ], + [ + "gene_synonym", + "ECK4073" + ], + [ + "gene_synonym", + "EcoGene:EG11952" + ], + [ + "gene_synonym", + "GI:16131906" + ], + [ + "gene_synonym", + "GeneID:948583" + ], + [ + "gene_synonym", + "JW4041" + ], + [ + "gene_synonym", + "NP_418504.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32714" + ], + [ + "gene_synonym", + "b4080" + ], + [ + "gene_synonym", + "mdtP" + ], + [ + "gene_synonym", + "sdsP" + ], + [ + "gene_synonym", + "yjcP" + ] + ], + "dna_sequence": "ATGATCAATCGTCAACTTTCACGTCTGCTGTTGTGCAGCATTCTCGGCAGCACGACGCTGATTTCCGGCTGTGCCCTGGTACGTAAGGATTCTGCACCTCATCAACAGCTCAAACCGGAACAAATCAAACTGGCCGACGATATTCATCTTGCCAGCTCCGGCTGGCCGCAGGCGCAGTGGTGGAAACAACTCAATGACCCGCAGCTGGATGCGCTGATCCAACGGACGCTAAGTGGTTCACACACCCTCGCCGAAGCGAAACTGCGGGAAGAAAAAGCGCAGTCCCAGGCCGATTTGTTAGATGCCGGTTCACAATTACAGGTCGCAGCGTTAGGGATGCTCAACCGCCAACGTGTCTCGGCGAACGGCTTTTTAAGCCCTTATTCAATGGATGCGCCAGCACTGGGTATGGACGGGCCGTACTATACGGAAGCCACAGTAGGTTTGTTTGCCGGACTGGATCTTGATTTGTGGGGTGTGCATCGCTCAGCGGTTGCCGCCGCCATTGGCGCGCATAATGCCGCGCTGGCAGAAACCGCAGCAGTAGAGCTATCGCTGGCCACGGGCGTAGCGCAGCTTTATTACAGTATGCAGGCCAGCTATCAGATGCTCGATCTGTTAGAACAAACTCACGATGTGATTGATTACGCGGTGAAAGCGCACCAGAGTAAAGTGGCGCACGGTCTGGAAGCGCAAGTGCCTTTCCACGGCGCGCGGGCACAGATTCTGGCGGTCGATAAACAAATTGTTGCCGTCAAAGGGCAAATCACCGAAACGCGAGAATCTCTGCGTGCATTGATTGGCGCGGGAGCCAGCGATATGCCGGAGATCAGACCGGTGGCATTACCGCAAGTCCAGACCGGCATTCCGGCGACACTCTCTTATGAGTTGCTCGCCAGACGCCCGGATCTGCAAGCCATGCGCTGGTATGTTCAGGCGTCATTAGATCAGGTGGATTCCGCGCGGGCGTTGTTCTATCCGAGCTTTGATATCAAAGCGTTTTTCGGTCTGGACTCCATCCATCTGCATACCTTATTCAAAAAAACCAGTCGCCAGTTCAACTTCATCCCGGGTCTGAAATTGCCGCTGTTTGACGGTGGACGGTTGAATGCCAATCTCGAAGGCACGCGCGCCGCCAGCAACATGATGATTGAACGTTACAACCAGTCAGTACTGAACGCGGTGCGTGACGTTGCCGTCAACGGCACGCGTCTGCAAACGCTCAACGACGAGCGAGAAATGCAGGCTGAACGCGTGGAAGCCACGCGCTTTACCCAGCGCGCTGCCGAGGCCGCCTATCAGCGCGGCTTAACCAGCCGCTTACAGGCCACCGAAGCCCGGTTGCCAGTGCTTGCCGAAGAGATGTCATTACTGATGCTGGACAGCCGCCGGGTGATCCAAAGCATTCAGTTGATGAAATCGCTGGGCGGCGGGTATCAGGCAGGTCCCGTCGTCGAGAAAAAATAA", + "dna_sequence_length": 1467, + "functions": [ + "outer membrane factor of efflux pump" + ], + "id": "CDS_3997", + "location": [ + [ + "NC_000913", + 4301030, + "-", + 1467 + ] + ], + "md5": "48ae5c48b39f862635c7bd5f6b9d9d98", + "parent_gene": "", + "protein_md5": "789cdc73f9b0234ef0741851c7021124", + "protein_translation": "MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYYSMQASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITETRESLRALIGAGASDMPEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQAGPVVEKK", + "protein_translation_length": 488, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013368" + ], + [ + "gene_synonym", + "ECK4074" + ], + [ + "gene_synonym", + "EcoGene:EG11953" + ], + [ + "gene_synonym", + "GI:90111683" + ], + [ + "gene_synonym", + "GeneID:948582" + ], + [ + "gene_synonym", + "JW4042" + ], + [ + "gene_synonym", + "NP_418505.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32715" + ], + [ + "gene_synonym", + "b4081" + ], + [ + "gene_synonym", + "mdtO" + ], + [ + "gene_synonym", + "sdsQ" + ], + [ + "gene_synonym", + "yjcQ" + ] + ], + "dna_sequence": "ATGAGCGCGCTCAACTCCCTGCCATTACCGGTGGTCAGGCTGCTGGCGTTCTTTCATGAAGAGTTAAGCGAGCGGCGACCAGGTCGCGTGCCGCAGACCGTGCAACTCTGGGTAGGCTGCCTGCTGGTGATTCTGATCTCGATGACCTTTGAGATCCCTTTTGTGGCGTTATCGCTGGCAGTGCTGTTTTACGGTATTCAGTCGAACGCGTTTTACACCAAATTTGTCGCGATCTTGTTTGTGGTTGCCACGGTGCTGGAGATCGGCAGCCTGTTTTTGATCTACAAATGGTCATACGGCGAACCGTTGATCCGATTGATCATCGCCGGACCGATCCTGATGGGCTGCATGTTTTTGATGCGCACCCATCGCTTGGGGCTGGTCTTTTTCGCCGTCGCCATTGTCGCTATTTACGGGCAAACCTTCCCCGCCATGCTCGACTATCCGGAAGTGGTCGTGCGCTTAACGCTGTGGTGTATCGTTGTTGGCCTCTATCCAACCTTGCTGATGACGTTAATCGGCGTGCTGTGGTTTCCCAGTCGTGCCATTTCGCAAATGCATCAGGCGCTTAATGATCGGCTTGATGATGCCATTAGTCACCTGACAGACAGCCTCGCACCGCTACCCGAAACGCGGATTGAAAGAGAGGCGCTGGCGCTACAAAAACTCAATGTCTTTTGCCTCGCGGACGATGCCAACTGGCGAACTCAAAACGCATGGTGGCAAAGCTGCGTGGCAACGGTAACCTACATTTACTCGACGCTGAATCGCTACGATCCCACCTCTTTTGCTGATTCTCAGGCAATTATTGAATTCCGACAAAAATTAGCTTCAGAAATCAACAAGCTGCAGCATGCCGTTGCTGAAGGTCAGTGCTGGCAAAGCGACTGGCGGATCAGTGAAAGTGAAGCGATGGCGGCACGGGAATGTAACCTGGAGAATATCTGCCAGACGTTGTTACAACTGGGTCAGATGGACCCGAATACGCCGCCAACGCCCGCAGCCAAACCGCCATCAATGGCCGCCGATGCTTTTACCAATCCAGACTATATGCGCTACGCGGTAAAAACGCTGCTCGCCTGTTTGATCTGTTACACCTTTTACAGCGGCGTGGACTGGGAAGGCATTCACACCTGTATGCTGACATGCGTGATCGTCGCTAACCCAAATGTCGGTTCGTCGTACCAGAAGATGGTGCTGCGTTTTGGCGGGGCCTTTTGCGGCGCGATTCTGGCGCTGTTATTCACGCTACTGGTCATGCCCTGGCTGGACAATATTGTCGAATTGCTGTTTGTGCTGGCACCGATTTTCCTGTTGGGCGCATGGATTGCCACCAGCTCTGAACGCTCTTCTTATATCGGCACACAGATGGTGGTCACCTTCGCGCTCGCCACGCTCGAAAACGTTTTTGGCCCAGTGTACGACCTGGTGGAAATTCGCGATCGCGCCCTGGGTATCATCATTGGTACCGTGGTGTCCGCGGTGATTTACACCTTTGTCTGGCCTGAAAGTGAAGCGCGCACACTGCCGCAAAAACTGGCTGGCACGCTGGGTATGTTAAGTAAAGTAATGCGGATCCCACGCCAGCAGGAAGTCACGGCTCTGCGCACTTATCTGCAAATTCGTATCGGTCTGCATGCGGCGTTTAATGCCTGTGAAGAGATGTGCCAACGCGTGGCGCTGGAGCGTCAACTGGACAGCGAAGAACGCGCATTACTGATTGAACGTTCGCAAACGGTTATTCGTCAGGGCCGCGATCTTCTTCACGCCTGGGATGCCACCTGGAACTCGGCGCAGGCGCTGGATAACGCACTACAGCCGGACAGAGCAGGTCAGTTTGCCGACGCCCTGGAGAAATACGCTGCCGGTCTGGCAACCGCACTCAGCCGTTCTCCTCAAATAACGCTTGAAGAGACACCCGCCTCTCAGGCCATCCTGCCCACCTTATTAAAACAGGAGCAACACGTCTGCCAGCTTTTCGCCCGCTTGCCAGACTGGACAGCCCCGGCATTAACGCCCGCCACGGAACAGGCACAAGGAGCCACGCAATGA", + "dna_sequence_length": 2052, + "functions": [ + "membrane translocase (MDR) of MdtNOP efflux pump, PET family" + ], + "id": "CDS_3998", + "location": [ + [ + "NC_000913", + 4303078, + "-", + 2052 + ] + ], + "md5": "5b5a8a466b23ce07d7df83501528f737", + "parent_gene": "", + "protein_md5": "c9a89206311cdcb30ae620083ea936db", + "protein_translation": "MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTVQLWVGCLLVILISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQNAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGATQ", + "protein_translation_length": 683, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013373" + ], + [ + "gene_synonym", + "ECK4075" + ], + [ + "gene_synonym", + "EcoGene:EG11954" + ], + [ + "gene_synonym", + "GI:16131908" + ], + [ + "gene_synonym", + "GeneID:948598" + ], + [ + "gene_synonym", + "JW4043" + ], + [ + "gene_synonym", + "NP_418506.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32716" + ], + [ + "gene_synonym", + "b4082" + ], + [ + "gene_synonym", + "mdtN" + ], + [ + "gene_synonym", + "sdsR" + ], + [ + "gene_synonym", + "yjcR" + ] + ], + "dna_sequence": "ATGGAAAGTACGCCGAAAAAAGCTCCTCGCAGTAAATTCCCTGCTCTGTTAGTGGTTGCGTTGGCGCTGGTTGCCCTTGTTTTCGTTATCTGGCGCGTAGACAGTGCGCCATCAACTAATGACGCTTACGCGTCAGCAGATACCATTGATGTGGTACCGGAAGTCAGCGGCCGCATTGTAGAACTGGCGGTCACCGACAACCAGGCAGTCAAACAGGGCGATTTGCTGTTCCGCATCGACCCGCGCCCGTACGAAGCCAATCTGGCGAAAGCTGAAGCCTCCCTCGCGGCGCTGGATAAGCAAATTATGCTCACCCAGCGTAGCGTTGACGCGCAACAGTTTGGTGCCGACTCGGTTAATGCCACGGTAGAAAAAGCCCGTGCCGCCGCGAAACAGGCCACAGATACATTACGCCGCACCGAGCCATTACTGAAAGAAGGTTTTGTCTCAGCGGAAGATGTTGACCGTGCAAGAACGGCGCAGCGCGCCGCAGAAGCGGATCTTAATGCCGTATTGTTACAGGCGCAGTCAGCCGCCAGCGCCGTCAGCGGCGTGGATGCATTAGTTGCCCAGCGTGCGGCGGTCGAAGCGGATATTGCCCTGACCAAACTGCATCTGGAAATGGCGACCGTTCGCGCGCCGTTTGATGGCCGGGTCATTTCCCTCAAAACCTCCGTCGGGCAATTTGCTTCTGCCATGCGCCCTATTTTTACCCTAATCGACACTCGTCACTGGTATGTGATCGCCAACTTCCGCGAAACCGATCTGAAAAATATTCGCTCAGGTACACCCGCAACGATTCGCCTGATGAGTGACAGCGGCAAAACCTTCGAGGGTAAAGTGGATTCGATTGGCTACGGCGTGCTACCGGATGACGGCGGCCTGGTGCTGGGCGGCCTGCCGAAAGTGTCTCGTTCTATTAACTGGGTCCGCGTTGCCCAGCGTTTTCCGGTCAAAATCATGGTCGATAAACCTGACCCGGAAATGTTCCGCATCGGCGCTTCGGCAGTCGCTAATCTTGAGCCGCAATAA", + "dna_sequence_length": 1032, + "functions": [ + "membrane fusion protein of efflux pump" + ], + "id": "CDS_3999", + "location": [ + [ + "NC_000913", + 4304109, + "-", + 1032 + ] + ], + "md5": "4ee6e95818b4ec22a4507f763573d7cd", + "parent_gene": "", + "protein_md5": "d2f4c2d153851a199c26a184e332e674", + "protein_translation": "MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4430" + ], + [ + "gene_synonym", + "EcoGene:EG14401" + ], + [ + "gene_synonym", + "GI:145698342" + ], + [ + "gene_synonym", + "GeneID:5061530" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A630" + ], + [ + "gene_synonym", + "YP_001165334.1" + ], + [ + "gene_synonym", + "b4622" + ], + [ + "gene_synonym", + "ytcA" + ] + ], + "dna_sequence": "ATGCCAACAGTTCTCTCTCGCATGGCGATGCAACTCAAAAAAACAGCCTGGATAATTCCCGTCTTCATGGTTTCGGGATGCTCATTATCTCCGGCAATCCCGGTGATCGGCGCTTATTATCCCAGCTGGTTTTTCTGCGCCATTGCCAGCCTTATTTTGACGCTCATCACGAGGCGAGTTATTCAGCGGGCAAATATCAATCTGGCATTTGTCGGAATTATTTATACCGCCCTTTTTGCTCTCTACGCCATGCTGTTCTGGCTGGCATTTTTCTAA", + "dna_sequence_length": 276, + "functions": [ + "putative inner membrane efflux pump-associated DUF1656 family protein" + ], + "id": "CDS_4000", + "location": [ + [ + "NC_000913", + 4304403, + "-", + 276 + ] + ], + "md5": "e4bfdc6dc7e90ec9fda04d7ab1e2700d", + "parent_gene": "", + "protein_md5": "9abdad21bf235621e318ea6ded2a0321", + "protein_translation": "MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANINLAFVGIIYTALFALYAMLFWLAFF", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013377" + ], + [ + "gene_synonym", + "ECK4076" + ], + [ + "gene_synonym", + "EcoGene:EG11955" + ], + [ + "gene_synonym", + "GI:90111684" + ], + [ + "gene_synonym", + "GeneID:948597" + ], + [ + "gene_synonym", + "JW5721" + ], + [ + "gene_synonym", + "NP_418507.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32717" + ], + [ + "gene_synonym", + "b4083" + ], + [ + "gene_synonym", + "yjcS" + ] + ], + "dna_sequence": "ATGAATAACTCTCGGTTATTCCGTTTGAGCAGGATTGTTATTGCGTTAACTGCCGCCAGCGGCATGATGGTAAATACCGCTAACGCGAAAGAGGAAGCGAAAGCCGCCACTCAATATACCCAACAGGTTAATCAGAATTACGCCAAATCATTACCGTTTAGCGATCGTCAGGATTTTGACGATGCCCAGCGTGGATTTATCGCCCCGCTGCTGGATGAAGGTATTCTGCGTGATGCGAACGGTAAAGTTTACTACCGCGCGGACGATTACAAATTTGATATTAATGCCGCAGCGCCGGAAACCGTAAACCCCAGCCTGTGGCGTCAGTCGCAAATCAACGGTATTTCTGGCCTGTTCAAAGTCACCGATAAAATGTATCAGGTGCGCGGCCAGGATATCTCTAACATTACGTTCGTTGAGGGCGAGAAAGGCATTATTGTTATCGACCCGCTGGTGACGCCGCCTGCCGCAAAAGCCGCACTTGACCTTTACTTCCAGCATCGTCCGCAAAAACCGATTGTTGCCGTTATCTACACTCACAGCCACACCGACCACTATGGTGGCGTGAAAGGCATTATCTCTGAAGCCGATGTTAAATCCGGCAAAGTTCAGGTGATTGCCCCTGCAGGCTTTATGGACGAAGCCATCAGCGAAAACGTGCTGGCGGGTAACATCATGAGCCGCCGTGCGCTCTACTCTTACGGTCTGTTACTGCCGCACAACGCGCAAGGCAATGTGGGTAATGGCCTTGGCGTGACGCTGGCAACGGGCGACCCGAGCATTATTGCACCGACGAAAACTATCGTCAGAACTGGCGAGAAGATGATTATCGACGGCCTGGAGTTTGACTTCCTGATGACCCCAGGTAGCGAAGCGCCAGCCGAAATGCACTTCTATATTCCGGCCCTGAAAGCCCTGTGTACCGCCGAGAACGCCACGCATACCCTGCACAACTTCTACACTCTGCGCGGCGCGAAAACCCGCGACACCAGCAAGTGGACCGAGTATCTGAACGAAACGCTGGATATGTGGGGTAACGACGCGGAAGTGCTGTTTATGCCGCACACCTGGCCGGTCTGGGGCAATAAGCATATCAATGATTATATTGGTAAATACCGCGATACCATCAAGTACATTCACGACCAGACCCTGCACCTGGCGAACCAGGGCTACACCATGAATGAAATCGGCGACATGATTAAGCTGCCGCCTGCACTTGCCAATAACTGGGCCAGCCGCGGCTATTACGGTTCTGTCAGCCACAACGCCCGCGCGGTGTATAACTTCTATCTTGGCTATTACGACGGTAACCCGGCTAACCTGCATCCGTATGGTCAGGTGGAGATGGGTAAACGTTACGTGCAGGCGCTGGGCGGTTCTGCCCGTGTCATCAACCTGGCGCAAGAAGCGAACAAGCAAGGTGATTACCGCTGGTCGGCAGAACTGCTGAAACAGGTGATTGCCGCCAACCCGGGTGACCAGGTCGCGAAGAATCTGCAAGCGAATAACTTTGAACAGCTGGGCTATCAGGCCGAGTCCGCCACATGGCGCGGTTTCTACCTGACCGGCGCGAAAGAGCTGCGCGAAGGGGTGCATAAGTTCAGCCACGGCACCACCGGTTCCCCGGACACCATTCGCGGGATGTCGGTCGAAATGCTGTTCGACTTTATGGCCGTTCGCCTCGATAGCGCGAAAGCTGCGGGTAAAAATATCAGCCTGAACTTCAATATGAGCAACGGCGATAACCTCAACCTGACGCTGAACGATAGCGTGCTTAACTACCGGAAAACGCTGCAACCGCAAGCCGACGCCTCTTTCTACATCAGCCGTGAAGATCTGCACGCCGTGCTGACCGGACAAGCCAAAATGGCGGATCTGGTAAAAGCGAAGAAAGCCAAAATTATTGGCAATGGCGCGAAACTGGAAGAAATTATCGCCTGTCTGGATAATTTCGATTTGTGGGTGAATATCGTAACCCCAAATTAA", + "dna_sequence_length": 1986, + "functions": [ + "metallo-beta-lactamase superfamily protein" + ], + "id": "CDS_4001", + "location": [ + [ + "NC_000913", + 4306597, + "-", + 1986 + ] + ], + "md5": "0ed6adb2d32e1e4582bd834e4a38e4cf", + "parent_gene": "", + "protein_md5": "9d47e926df74e0a2f4ad88d4e256c2e1", + "protein_translation": "MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVNQNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKVYYRADDYKFDINAAAPETVNPSLWRQSQINGISGLFKVTDKMYQVRGQDISNITFVEGEKGIIVIDPLVTPPAAKAALDLYFQHRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLPHNAQGNVGNGLGVTLATGDPSIIAPTKTIVRTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVWGNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDYRWSAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDFMAVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTPN", + "protein_translation_length": 661, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013380" + ], + [ + "gene_synonym", + "ECK4077" + ], + [ + "gene_synonym", + "EcoGene:EG11956" + ], + [ + "gene_synonym", + "GI:16131910" + ], + [ + "gene_synonym", + "GeneID:948596" + ], + [ + "gene_synonym", + "JW5724" + ], + [ + "gene_synonym", + "NP_418508.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32718" + ], + [ + "gene_synonym", + "alsK" + ], + [ + "gene_synonym", + "b4084" + ], + [ + "gene_synonym", + "yjcT" + ] + ], + "dna_sequence": "ATGCAAAAACAGCATAACGTCGTAGCGGGCGTGGATATGGGGGCAACGCATATCCGCTTTTGTCTGCGGACAGCAGAAGGTGAAACGCTACACTGCGAAAAAAAGCGGACCGCAGAAGTCATTGCTCCCGGCCTGGTGTCGGGTATCGGCGAAATGATTGACGAGCAACTCAGGCGCTTTAACGCTCGCTGTCATGGTCTGGTGATGGGATTTCCGGCGCTGGTCAGTAAAGATAAACGCACCATTATTTCTACGCCTAACCTGCCGTTAACAGCGGCGGATTTATATGATCTCGCCGATAAGCTCGAAAATACGCTGAATTGTCCGGTTGAGTTTTCCCGCGACGTTAACCTGCAACTCTCCTGGGACGTAGTAGAAAACCGCCTTACGCAACAACTGGTTCTGGCGGCCTATCTCGGTACGGGGATGGGGTTCGCAGTGTGGATGAACGGTGCGCCGTGGACGGGTGCACACGGTGTGGCAGGCGAACTGGGTCATATCCCCCTGGGAGATATGACCCAACACTGCGCGTGTGGCAATCCTGGGTGCCTGGAAACCAATTGCTCTGGAATGGCGCTAAGACGCTGGTACGAACAACAGCCCCGAAATTACCCATTGCGCGATCTTTTCGTCCATGCGGAAAACGCCCCTTTCGTCCAGAGTCTGCTTGAAAACGCGGCACGGGCCATTGCCACCAGCATTAATCTGTTCGATCCCGATGCGGTGATCCTGGGCGGTGGCGTGATGGATATGCCCGCCTTCCCACGCGAGACTCTCGTTGCCATGACCCAAAAGTACCTGCGCCGTCCACTGCCGCATCAGGTCGTGCGCTTTATTGCCGCCTCATCTTCTGACTTTAATGGCGCTCAGGGTGCAGCAATATTGGCGCATCAACGTTTTTTGCCACAGTTCTGTGCTAAAGCCCCATGA", + "dna_sequence_length": 930, + "functions": [ + "D-allose kinase" + ], + "id": "CDS_4002", + "location": [ + [ + "NC_000913", + 4307799, + "-", + 930 + ] + ], + "md5": "84f940de1b25e92642fa76de61695dde", + "parent_gene": "", + "protein_md5": "31c48e83617ae616d4965ba6ad2f4d39", + "protein_translation": "MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013382" + ], + [ + "gene_synonym", + "ECK4078" + ], + [ + "gene_synonym", + "EcoGene:EG11957" + ], + [ + "gene_synonym", + "GI:16131911" + ], + [ + "gene_synonym", + "GeneID:948595" + ], + [ + "gene_synonym", + "JW4046" + ], + [ + "gene_synonym", + "NP_418509.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32719" + ], + [ + "gene_synonym", + "alsE" + ], + [ + "gene_synonym", + "b4085" + ], + [ + "gene_synonym", + "yjcU" + ] + ], + "dna_sequence": "ATGAAAATCTCCCCCTCGTTAATGTGTATGGATCTGCTGAAATTTAAAGAACAGATCGAATTTATCGACAGCCATGCCGATTACTTCCACATCGATATCATGGACGGTCACTTTGTCCCCAATCTGACACTCTCACCGTTCTTCGTAAGTCAGGTTAAAAAACTGGCAACTAAACCGCTCGACTGTCATCTGATGGTGACGCGGCCGCAGGATTACATTGCTCAACTGGCGCGTGCGGGAGCAGATTTCATCACTCTGCATCCGGAAACCATCAACGGCCAGGCGTTCCGCCTGATTGATGAAATCCGCCGTCATGACATGAAAGTGGGGCTGATCCTTAACCCGGAGACGCCAGTTGAGGCCATGAAATACTATATCCATAAGGCCGATAAAATTACGGTCATGACTGTCGATCCCGGCTTTGCCGGACAACCGTTCATTCCTGAAATGCTGGATAAACTTGCCGAACTGAAGGCATGGCGTGAACGAGAAGGTCTGGAGTACGAAATTGAGGTGGACGGTTCCTGCAACCAGGCAACTTACGAAAAACTGATGGCGGCAGGGGCGGATGTCTTTATCGTCGGCACTTCCGGCCTGTTTAATCATGCGGAAAATATCGACGAAGCATGGAGAATTATGACCGCGCAGATTCTGGCTGCAAAAAGCGAGGTACAGCCTCATGCAAAAACAGCATAA", + "dna_sequence_length": 696, + "functions": [ + "allulose-6-phosphate 3-epimerase" + ], + "id": "CDS_4003", + "location": [ + [ + "NC_000913", + 4308478, + "-", + 696 + ] + ], + "md5": "2f856213f74e5f35a8705371b7383aea", + "parent_gene": "", + "protein_md5": "5a4af81f8333785c92397ad10b347023", + "protein_translation": "MKISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQILAAKSEVQPHAKTA", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013392" + ], + [ + "gene_synonym", + "ECK4079" + ], + [ + "gene_synonym", + "EcoGene:EG11958" + ], + [ + "gene_synonym", + "GI:16131912" + ], + [ + "gene_synonym", + "GeneID:948594" + ], + [ + "gene_synonym", + "JW4047" + ], + [ + "gene_synonym", + "NP_418510.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32720" + ], + [ + "gene_synonym", + "alsC" + ], + [ + "gene_synonym", + "b4086" + ], + [ + "gene_synonym", + "yjcV" + ] + ], + "dna_sequence": "ATGGGCTTTACCACAAGAGTAAAAAGCGAAGCGAGCGAGAAGAAACCGTTCAACTTTGCGCTGTTCTGGGATAAATACGGCACCTTTTTTATCCTGGCGATCATCGTCGCCATCTTTGGTTCGCTGTCACCAGAATATTTTCTGACCACCAATAATATTACCCAGATTTTTGTTCAAAGCTCCGTGACGGTATTGATCGGCATGGGCGAGTTTTTCGCTATCCTGGTCGCTGGTATCGACCTCTCGGTTGGCGCGATTCTGGCGCTTTCCGGTATGGTGACCGCCAAACTGATGTTGGCAGGTGTTGACCCGTTTCTCGCAGCGATGATTGGCGGTGTACTGGTTGGCGGCGCACTGGGGGCGATCAACGGCTGCCTGGTCAACTGGACGGGGCTACACCCGTTCATCATCACCCTTGGCACCAACGCGATTTTCCGTGGGATCACGCTGGTGATCTCCGATGCCAACTCGGTATACGGCTTCTCATTTGACTTCGTGAACTTCTTTGCCGCCAGCGTAATTGGGATACCTGTCCCCGTTATCTTCTCACTAATTGTCGCGCTCATCCTTTGGTTTCTGACAACGCGTATGCGGCTCGGGCGCAACATCTACGCACTGGGCGGCAACAAAAATTCGGCGTTCTATTCCGGGATTGACGTGAAATTCCACATCCTGGTGGTGTTTATCATCTCCGGTGTTTGTGCAGGTCTGGCAGGCGTCGTCTCAACTGCACGACTCGGTGCCGCAGAACCGCTTGCCGGTATGGGTTTTGAAACCTATGCCATTGCCAGCGCCATCATTGGCGGCACCAGTTTCTTCGGCGGCAAGGGGCGCATTTTCTCTGTGGTGATTGGCGGGTTGATCATCGGCACCATCAACAACGGTCTGAATATTTTGCAGGTACAAACCTATTACCAACTGGTGGTGATGGGCGGATTAATTATCGCGGCTGTCGCCCTTGACCGTCTTATCAGTAAGTAA", + "dna_sequence_length": 981, + "functions": [ + "D-allose ABC transporter permease" + ], + "id": "CDS_4004", + "location": [ + [ + "NC_000913", + 4309469, + "-", + 981 + ] + ], + "md5": "bb3a6bb1266ffa388abb9c5887f850a2", + "parent_gene": "", + "protein_md5": "2892364ec80d127a376a1c557ffffca6", + "protein_translation": "MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013394" + ], + [ + "gene_synonym", + "ECK4080" + ], + [ + "gene_synonym", + "EcoGene:EG11959" + ], + [ + "gene_synonym", + "GI:16131913" + ], + [ + "gene_synonym", + "GeneID:948593" + ], + [ + "gene_synonym", + "JW4048" + ], + [ + "gene_synonym", + "NP_418511.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32721" + ], + [ + "gene_synonym", + "alsA" + ], + [ + "gene_synonym", + "b4087" + ], + [ + "gene_synonym", + "yjcW" + ] + ], + "dna_sequence": "ATGGCCACGCCATATATATCGATGGCGGGGATCGGCAAGTCCTTTGGTCCGGTTCACGCATTAAAGTCGGTTAATTTAACGGTTTATCCTGGTGAAATACATGCATTACTAGGAGAAAATGGCGCGGGTAAATCCACGCTAATGAAAGTTTTATCCGGAATACATGAGCCGACCAAAGGCACCATTACCATTAATAACATTAGCTATAACAAGCTGGATCATAAATTAGCGGCACAACTCGGTATCGGGATTATTTATCAGGAACTCAGCGTTATTGATGAATTAACCGTACTGGAAAATTTATATATTGGTCGTCATCTGACGAAAAAAATCTGTGGCGTCAATATTATCGACTGGCGAGAAATGCGTGTCCGCGCCGCCATGATGTTATTACGCGTGGGCTTGAAAGTTGATCTAGATGAGAAAGTGGCGAATTTATCTATCAGCCACAAGCAGATGCTAGAAATTGCCAAAACGCTGATGCTCGATGCCAAAGTCATCATCATGGATGAACCCACCTCCTCACTCACCAATAAAGAGGTGGACTATCTGTTTCTGATCATGAATCAGTTGCGTAAAGAGGGTACGGCCATCGTCTATATCTCGCATAAGTTGGCGGAAATTCGCCGTATTTGCGACCGCTATACGGTGATGAAAGACGGCAGCAGCGTTTGCAGCGGCATAGTAAGCGATGTGTCAAATGACGATATCGTCCGTCTGATGGTAGGCCGCGAACTGCAAAACCGTTTTAACGCGATGAAGGAGAATGTCAGCAACCTTGCGCACGAAACGGTTTTTGAGGTGCGGAACGTCACCAGTCGTGACAGAAAAAAGGTCCGGGATATCTCATTTAGCGTCTGCCGGGGAGAAATATTAGGCTTTGCCGGACTGGTCGGTTCCGGACGTACTGAACTGATGAATTGTCTGTTTGGCGTGGATAAACGCGCTGGCGGAGAAATCCGTCTTAATGGCAAAGATATCTCTCCACGTTCACCCCTGGATGCCGTGAAAAAAGGGATGGCTTACATCACTGAAAGCCGCCGGGATAACGGTTTTTTCCCCAACTTTTCCATCGCTCAGAACATGGCGATCAGCCGCAGTCTGAAAGACGGCGGCTATAAAGGCGCGATGGGCTTGTTTCATGAAGTTGACGAGCAACGTACCGCTGAAAATCAACGCGAACTGCTGGCGCTGAAATGTCATTCGGTAAACCAGAATATCACCGAACTCTCCGGGGGAAATCAGCAGAAAGTCCTGATCTCCAAATGGCTGTGCTGTTGCCCGGAAGTGATTATTTTCGATGAACCTACCCGCGGCATCGACGTTGGCGCGAAAGCCGAAATTTACAAAGTGATGCGCCAACTGGCGGACGACGGAAAAGTCATCCTGATGGTGTCATCTGAACTACCTGAAATTATCACCGTCTGCGACCGCATCGCCGTGTTCTGCGAAGGACGACTGACGCAAATCCTGACGAATCGCGATGACATGAGCGAAGAGGAGATTATGGCATGGGCTTTACCACAAGAGTAA", + "dna_sequence_length": 1533, + "functions": [ + "D-allose ABC transporter ATPase" + ], + "id": "CDS_4005", + "location": [ + [ + "NC_000913", + 4310980, + "-", + 1533 + ] + ], + "md5": "8facd775187e544d5e210621dc505e6c", + "parent_gene": "", + "protein_md5": "d522c72341878ea1cac739ac7c78e2d9", + "protein_translation": "MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRDDMSEEEIMAWALPQE", + "protein_translation_length": 510, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013398" + ], + [ + "gene_synonym", + "ECK4081" + ], + [ + "gene_synonym", + "EcoGene:EG12458" + ], + [ + "gene_synonym", + "GI:16131914" + ], + [ + "gene_synonym", + "GeneID:948604" + ], + [ + "gene_synonym", + "JW4049" + ], + [ + "gene_synonym", + "NP_418512.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39265" + ], + [ + "gene_synonym", + "alsB" + ], + [ + "gene_synonym", + "b4088" + ], + [ + "gene_synonym", + "yjcX" + ] + ], + "dna_sequence": "ATGAATAAATATCTGAAATATTTCAGCGGCACACTCGTGGGCTTAATGTTGTCAACCAGCGCTTTTGCTGCCGCCGAATATGCTGTCGTATTGAAAACCCTCTCCAACCCATTTTGGGTAGATATGAAAAAAGGCATTGAAGATGAAGCAAAAACACTGGGCGTCAGCGTTGATATTTTTGCCTCTCCTTCAGAAGGCGATTTTCAATCTCAATTGCAGTTATTTGAAGATCTCAGTAATAAAAATTACAAAGGTATCGCCTTCGCTCCATTATCCTCAGTGAATCTGGTCATGCCTGTCGCCCGCGCATGGAAAAAAGGCATTTATCTGGTTAATCTCGATGAAAAAATCGACATGGATAATCTGAAAAAAGCTGGCGGCAATGTGGAAGCTTTTGTCACCACCGATAACGTTGCTGTCGGGGCGAAAGGCGCGTCGTTCATTATTGACAAATTGGGCGCTGAAGGTGGTGAAGTCGCAATCATTGAGGGTAAAGCCGGTAACGCCTCCGGTGAAGCGCGTCGTAATGGTGCCACCGAAGCCTTCAAAAAAGCAAGCCAGATCAAGCTTGTCGCCAGCCAGCCTGCCGACTGGGACCGCATTAAAGCACTGGATGTCGCCACTAACGTGTTGCAACGTAATCCGAATATTAAAGCGATCTATTGCGCGAATGACACGATGGCAATGGGTGTTGCTCAGGCAGTCGCAAACGCCGGAAAAACGGGAAAAGTGCTGGTCGTCGGTACAGATGGCATTCCGGAAGCCCGCAAAATGGTGGAAGCCGGACAAATGACCGCGACGGTTGCCCAGAACCCGGCGGATATCGGCGCAACGGGTCTGAAGCTGATGGTTGACGCTGAGAAATCCGGCAAGGTTATCCCGCTGGATAAAGCACCGGAATTTAAACTGGTCGATTCAATCCTGGTCACTCAATAA", + "dna_sequence_length": 936, + "functions": [ + "D-allose ABC transporter periplasmic binding protein" + ], + "id": "CDS_4006", + "location": [ + [ + "NC_000913", + 4312042, + "-", + 936 + ] + ], + "md5": "c1a8f6dee07b23eed3082667a7ae2f26", + "parent_gene": "", + "protein_md5": "367c7f7a706d76b2bc4909be5e2c30c4", + "protein_translation": "MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013400" + ], + [ + "gene_synonym", + "ECK4082" + ], + [ + "gene_synonym", + "EcoGene:EG12459" + ], + [ + "gene_synonym", + "GI:90111685" + ], + [ + "gene_synonym", + "GeneID:948603" + ], + [ + "gene_synonym", + "JW4050" + ], + [ + "gene_synonym", + "NP_418513.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS7" + ], + [ + "gene_synonym", + "alsR" + ], + [ + "gene_synonym", + "b4089" + ], + [ + "gene_synonym", + "rpiR" + ], + [ + "gene_synonym", + "yjcY" + ] + ], + "dna_sequence": "ATGAGCCAGTCAGAGTTTGATTCAGCGCTTCCGAACGGTATAGGGTTAGCGCCTTACCTGCGAATGAAGCAGGAAGGAATGACAGAAAATGAAAGCCGCATCGTGGAGTGGTTACTCAAACCCGGTAACCTGAGTTGTGCACCCGCAATTAAAGATGTCGCAGAAGCTCTGGCGGTATCTGAAGCGATGATAGTTAAGGTATCAAAGCTGCTGGGGTTTAGCGGCTTTCGTAACTTACGCAGTGCGCTGGAAGATTATTTTTCTCAGTCAGAACAGGTATTGCCTTCCGAGTTGGCTTTTGATGAAGCGCCGCAGGATGTGGTGAATAAGGTATTTAACATCACTTTACGCACCATTATGGAAGGTCAGTCGATCGTCAACGTTGATGAGATCCACCGTGCCGCCCGCTTTTTCTATCAGGCCAGACAGCGGGATTTGTACGGTGCCGGAGGATCAAATGCTATCTGTGCTGATGTACAGCACAAGTTCTTGCGCATTGGCGTACGCTGTCAGGCCTATCCTGATGCTCACATCATGATGATGTCCGCTTCGTTGTTACAGGAAGGAGATGTTGTGCTGGTAGTGACCCATTCCGGGCGAACCAGTGATGTAAAAGCGGCCGTAGAACTGGCAAAAAAGAACGGGGCAAAGATTATTTGTATAACCCATAGCTACCATTCACCGATAGCGAAACTGGCCGATTATATTATTTGCTCACCAGCCCCGGAAACGCCGTTATTAGGTCGTAATGCCTCGGCAAGAATATTACAACTAACTTTGCTGGACGCTTTTTTTGTCTCTGTCGCCCAGCTCAACATTGAACAAGCTAATATTAATATGCAAAAAACCGGCGCAATTGTTGATTTCTTCTCACCAGGCGCGCTGAAATAA", + "dna_sequence_length": 891, + "functions": [ + "d-allose-inducible als operon transcriptional repressor", + "autorepressor", + "repressor of rpiR" + ], + "id": "CDS_4007", + "location": [ + [ + "NC_000913", + 4312991, + "-", + 891 + ] + ], + "md5": "9d5332936a308d206132e47c46f90875", + "parent_gene": "", + "protein_md5": "d3aabd2bfef2d44bcfe52a4c266a95fb", + "protein_translation": "MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013405" + ], + [ + "gene_synonym", + "ECK4083" + ], + [ + "gene_synonym", + "EcoGene:EG11827" + ], + [ + "gene_synonym", + "GI:16131916" + ], + [ + "gene_synonym", + "GeneID:948602" + ], + [ + "gene_synonym", + "JW4051" + ], + [ + "gene_synonym", + "NP_418514.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37351" + ], + [ + "gene_synonym", + "alsB" + ], + [ + "gene_synonym", + "alsI" + ], + [ + "gene_synonym", + "b4090" + ], + [ + "gene_synonym", + "rpiB" + ], + [ + "gene_synonym", + "yjcA" + ] + ], + "dna_sequence": "ATGAAAAAGATTGCATTTGGCTGTGATCATGTCGGTTTCATTTTAAAACATGAAATAGTGGCACATTTAGTTGAGCGTGGCGTTGAAGTGATTGATAAAGGAACCTGGTCGTCAGAGCGTACTGATTATCCACATTACGCCAGTCAAGTCGCACTGGCTGTTGCTGGCGGAGAGGTTGATGGCGGGATTTTGATTTGTGGTACTGGCGTCGGTATTTCGATAGCGGCGAACAAGTTTGCCGGAATTCGCGCGGTCGTCTGTAGCGAACCTTATTCCGCGCAACTTTCGCGGCAGCATAACGACACCAACGTGCTGGCTTTTGGTTCACGAGTGGTTGGCCTCGAACTGGCAAAAATGATTGTGGATGCGTGGCTGGGCGCACAGTACGAAGGCGGTCGTCATCAACAACGCGTGGAGGCGATTACGGCAATAGAGCAGCGGAGAAATTGA", + "dna_sequence_length": 450, + "functions": [ + "ribose 5-phosphate isomerase B/allose 6-phosphate isomerase" + ], + "id": "CDS_4008", + "location": [ + [ + "NC_000913", + 4313350, + "+", + 450 + ] + ], + "md5": "d2312aabdc04779961a3721632935119", + "parent_gene": "", + "protein_md5": "d4a5ef41f015a8393ca21129d4a09bca", + "protein_translation": "MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQRRN", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174120" + ], + [ + "gene_synonym", + "ECK4084" + ], + [ + "gene_synonym", + "EcoGene:EG14407" + ], + [ + "gene_synonym", + "GI:49176458" + ], + [ + "gene_synonym", + "GeneID:2847754" + ], + [ + "gene_synonym", + "JW5890" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BEX5" + ], + [ + "gene_synonym", + "YP_026281.1" + ], + [ + "gene_synonym", + "b4487" + ], + [ + "gene_synonym", + "yjdP" + ] + ], + "dna_sequence": "ATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACCGTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTATGAAGATTCGCGCGACGACGGCTGGCAGCGTGAAGTGAGCGACGATCGGCGCAGACAATATGACGACCGCCGCCGCCAGTTTGAAGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGA", + "dna_sequence_length": 330, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_4009", + "location": [ + [ + "NC_000913", + 4313868, + "+", + 330 + ] + ], + "md5": "7e5902e5f1bf91c46a9b8b2682684a10", + "parent_gene": "", + "protein_md5": "ed39301cd6fd38cfef9b149e911ba158", + "protein_translation": "MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013412" + ], + [ + "gene_synonym", + "ECK4085" + ], + [ + "gene_synonym", + "EcoGene:EG10725" + ], + [ + "gene_synonym", + "GI:16131918" + ], + [ + "gene_synonym", + "GeneID:948600" + ], + [ + "gene_synonym", + "JW4053" + ], + [ + "gene_synonym", + "NP_418516.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16692" + ], + [ + "gene_synonym", + "b4092" + ], + [ + "gene_synonym", + "phnP" + ] + ], + "dna_sequence": "ATGAGCCTGACCCTCACGCTCACCGGCACCGGCGGCGCACAGGGCGTTCCGGCATGGGGCTGCGAGTGTGCGGCCTGCGCCAGAGCGCGGCGCTCGCCGCAGTATCGCCGCCAACCGTGCAGCGGCGTAGTGAAGTTTAACGACGCAATCACCCTGATCGACGCCGGGCTGCACGATCTCGCCGATCGCTGGTCGCCCGGATCGTTCCAGCAGTTTTTGCTGACGCATTATCATATGGATCACGTCCAGGGGCTGTTTCCGCTGCGCTGGGGCGTTGGCGATCCGATCCCGGTTTACGGCCCGCCGGATGAACAGGGCTGCGACGATCTGTTTAAACATCCGGGCCTGCTTGATTTCAGCCACACGGTGGAACCGTTTGTGGTGTTTGATTTGCAGGGGTTACAGGTCACGCCCCTGCCGCTCAACCACTCAAAACTGACCTTCGGTTATCTGCTGGAAACGGCACACAGCCGGGTGGCGTGGCTGTCTGACACCGCAGGCTTGCCGGAAAAAACGCTGAAATTTTTACGCAATAATCAGCCGCAGGTAATGGTGATGGATTGCAGTCACCCGCCGCGCGCGGATGCACCGCGTAATCACTGTGATTTAAATACCGTGCTTGCGCTGAATCAGGTTATCCGCTCGCCACGGGTGATTCTGACCCATATCAGCCACCAGTTTGATGCGTGGCTGATGGAAAACGCACTACCGTCAGGGTTTGAGGTGGGGTTTGATGGGATGGAGATTGGGGTGGCGTGA", + "dna_sequence_length": 759, + "functions": [ + "5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase" + ], + "id": "CDS_4010", + "location": [ + [ + "NC_000913", + 4315102, + "-", + 759 + ] + ], + "md5": "cddfe9c368a678a56de209a6597b1150", + "parent_gene": "", + "protein_md5": "b78865cfd1ba33680a0dcdab78be6953", + "protein_translation": "MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEIGVA", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013415" + ], + [ + "gene_synonym", + "ECK4086" + ], + [ + "gene_synonym", + "EcoGene:EG10724" + ], + [ + "gene_synonym", + "GI:16131919" + ], + [ + "gene_synonym", + "GeneID:948599" + ], + [ + "gene_synonym", + "JW4054" + ], + [ + "gene_synonym", + "NP_418517.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16691" + ], + [ + "gene_synonym", + "b4093" + ], + [ + "gene_synonym", + "phnO" + ] + ], + "dna_sequence": "ATGCCTGCTTGTGAGCTTCGCCCGGCCACGCAGTACGACACCGACGCGGTTTACGCGCTGATTTGTGAGCTAAAACAGGCGGAGTTTGACCACCACGCGTTTCGCGTGGGTTTTAACGCCAATCTGCGCGACCCAAACATGCGCTACCATCTGGCGCTGCTTGATGGCGAAGTTGTCGGCATGATCGGCCTGCATTTGCAGTTTCATCTGCATCATGTCAACTGGATCGGCGAAATTCAGGAGTTGGTGGTAATGCCGCAGGCGCGCGGTCTGAACGTCGGCAGTAAGTTACTGGCGTGGGCAGAAGAAGAAGCCCGCCAGGCCGGGGCCGAAATGACCGAACTTTCGACCAACGTGAAGCGCCACGACGCGCACCGTTTCTATCTGCGCGAAGGCTACGAGCAGAGCCACTTCCGCTTCACCAAGGCGCTGTAA", + "dna_sequence_length": 435, + "functions": [ + "aminoalkylphosphonate N-acetyltransferase" + ], + "id": "CDS_4011", + "location": [ + [ + "NC_000913", + 4315538, + "-", + 435 + ] + ], + "md5": "f9765167af9731273b8c4cdc92ee7b7c", + "parent_gene": "", + "protein_md5": "ed97bda1e25dac2e0837706ae13d09cb", + "protein_translation": "MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL", + "protein_translation_length": 144, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013417" + ], + [ + "gene_synonym", + "ECK4087" + ], + [ + "gene_synonym", + "EcoGene:EG10723" + ], + [ + "gene_synonym", + "GI:16131920" + ], + [ + "gene_synonym", + "GeneID:948608" + ], + [ + "gene_synonym", + "JW4055" + ], + [ + "gene_synonym", + "NP_418518.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16690" + ], + [ + "gene_synonym", + "b4094" + ], + [ + "gene_synonym", + "phnN" + ] + ], + "dna_sequence": "ATGATGGGAAAACTGATTTGGTTAATGGGGCCGTCCGGCTCCGGGAAAGACAGCCTGCTGGCGGAACTCCGCCTGCGGGAACAAACTCAGTTACTGGTGGCGCATCGCTACATCACGCGCGATGCCAGCGCCGGAAGTGAAAACCATATCGCCCTGAGCGAGCAGGAGTTTTTTACCCGCGCGGGGCAAAATCTGTTGGCCTTAAGCTGGCACGCTAACGGTCTGTATTATGGCGTCGGCGTCGAGATTGATCTCTGGCTGCACGCCGGATTCGACGTGCTGGTCAACGGCTCACGCGCCCATCTGCCGCAGGCGCGGGCGCGCTATCAATCGGCGCTGCTGCCCGTCTGTTTACAGGTTTCGCCGGAGATCCTCCGCCAGCGCCTGGAAAACCGTGGCCGTGAAAACGCCAGTGAAATTAACGCCCGCCTGGCGCGCGCCGCCCGCTATACTCCACAGGATTGCCATACGCTCAACAATGACGGCAGCCTGCGCCAGTCGGTCGACACGCTGCTGACGCTGATCCATCAGAAGGAGAAACACCATGCCTGCTTGTGA", + "dna_sequence_length": 558, + "functions": [ + "ribose 1,5-bisphosphokinase" + ], + "id": "CDS_4012", + "location": [ + [ + "NC_000913", + 4316082, + "-", + 558 + ] + ], + "md5": "b120b3910efc6ed3b7d208e76b829386", + "parent_gene": "", + "protein_md5": "8e79cf4423fe4c80a00344ead74f5e9c", + "protein_translation": "MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013419" + ], + [ + "gene_synonym", + "ECK4088" + ], + [ + "gene_synonym", + "EcoGene:EG10722" + ], + [ + "gene_synonym", + "GI:16131921" + ], + [ + "gene_synonym", + "GeneID:948613" + ], + [ + "gene_synonym", + "JW4056" + ], + [ + "gene_synonym", + "NP_418519.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16689" + ], + [ + "gene_synonym", + "b4095" + ], + [ + "gene_synonym", + "phnM" + ] + ], + "dna_sequence": "ATGATTATCAATAACGTTAAGCTGGTGCTGGAAAACGAGGTGGTAAGCGGTTCGCTGGAGGTGCAGAACGGCGAAATCCGCGCCTTTGCCGAAAGCCAGAGCCGCCTGCCGGAGGCGATGGACGGCGAAGGCGGCTGGCTGCTGCCGGGGCTGATTGAGCTGCATACCGATAATCTGGATAAATTCTTCACCCCGCGCCCGAAAGTTGACTGGCCTGCCCACTCGGCGATGAGCAGCCACGACGCGCTGATGGTGGCGAGCGGCATCACCACCGTACTGGATGCCGTGGCAATTGGCGACGTGCGCGACGGCGGCGATCGGCTGGAGAATCTGGAGAAGATGATCAACGCCATCGAAGAGACGCAGAAACGCGGCGTCAACCGCGCCGAGCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCGAGCCGGTGACGCTGGTGTCGCTGATGGACCACTCGCCGGGCCAGCGCCAGTTCGCCAACCGCGAGAAGTATCGCGAATATTATCAGGGCAAATACTCCCTCACTGATGCGCAGATGCAGCAGTACGAAGAAGAGCAACTGGCGCTCGCCGCACGCTGGTCGCAGCCGAATCGCGAATCCATCGCCGCCCTGTGCCGCGCGCGAAAAATTGCGCTTGCCAGCCACGATGACGCCACCCACGCCCACGTTGCTGAATCTCACCAGCTTGGCAGCGTGATCGCCGAATTTCCCACCACGTTCGAAGCGGCGGAAGCCTCGCGCAAGCATGGCATGAACGTGCTGATGGGCGCGCCGAATATTGTGCGCGGCGGCTCGCACTCCGGCAACGTGGCGGCCAGTGAACTGGCGCAGCTTGGCCTGCTGGATATCCTCTCTTCCGACTACTACCCCGCCAGCCTGCTCGATGCGGCATTTCGCGTCGCCGATGACCAGAGCAACCGCTTTACGCTGCCGCAGGCGGTGAAGCTGGTGACTAAAAATCCAGCGCAGGCGCTTAATCTCCAGGATCGCGGGGTGATTGGCGAGGGCAAACGCGCCGACCTGGTGCTGGCGCATCGCAAGGACAATCATATTCATATCGACCACGTCTGGCGTCAGGGTAAAAGGGTGTTCTGA", + "dna_sequence_length": 1137, + "functions": [ + "ribophosphonate triphosphate hydrolase" + ], + "id": "CDS_4013", + "location": [ + [ + "NC_000913", + 4317218, + "-", + 1137 + ] + ], + "md5": "5ca7b3fa728f83663f17152515d74989", + "parent_gene": "", + "protein_md5": "1b752d921d7767d0ba56f0be4f42221c", + "protein_translation": "MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF", + "protein_translation_length": 378, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013421" + ], + [ + "gene_synonym", + "ECK4089" + ], + [ + "gene_synonym", + "EcoGene:EG10721" + ], + [ + "gene_synonym", + "GI:16131922" + ], + [ + "gene_synonym", + "GeneID:948612" + ], + [ + "gene_synonym", + "JW4057" + ], + [ + "gene_synonym", + "NP_418520.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16679" + ], + [ + "gene_synonym", + "b4096" + ], + [ + "gene_synonym", + "phnL" + ] + ], + "dna_sequence": "ATGATTAACGTACAAAACGTCAGTAAAACCTTCATCCTGCACCAGCAAAACGGCGTGCGCCTGCCCGTCCTCAATCGCGCCTCGCTCACCGTCAACGCGGGCGAATGCGTGGTGCTCCACGGCCATTCCGGCAGCGGCAAATCAACTCTGCTACGCTCGCTGTACGCCAACTATCTGCCCGACGAAGGTCAAATCCAGATCAAACACGGTGACGAGTGGGTAGACCTGGTCACCGCGCCAGCGCGCAAAGTGGTGGAAATCCGCAAAACCACCGTCGGCTGGGTGAGCCAGTTTCTGCGCGTCATCCCGCGTATCTCAGCACTGGAAGTGGTGATGCAGCCGCTGCTCGATACCGGCGTTCCGCGTGAAGCCTGCGCCGCTAAAGCCGCGCGTCTTCTCACCCGCCTGAACGTGCCGGAACGCCTGTGGCACCTGGCACCATCGACATTTTCCGGTGGCGAACAGCAGCGCGTCAACATCGCCCGCGGCTTTATCGTCGACTACCCCATTCTGCTGCTTGACGAACCTACCGCCTCGCTGGACGCCAAAAACAGCGCCGCGGTGGTGGAACTGATTCGCGAAGCCAAAACCCGTGGCGCAGCCATCGTAGGCATCTTCCATGACGAAGCTGTACGTAATGACGTCGCCGACCGCCTGCACCCAATGGGAGCCTCTTCATGA", + "dna_sequence_length": 681, + "functions": [ + "ribophosphonate triphosphate synthase subunit", + "putative ABC transporter-related ATPase" + ], + "id": "CDS_4014", + "location": [ + [ + "NC_000913", + 4317895, + "-", + 681 + ] + ], + "md5": "0c3957dec627890c302d544fa1b65bcf", + "parent_gene": "", + "protein_md5": "a87e00c8eb66ddf48c9ad997f1c6554a", + "protein_translation": "MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS", + "protein_translation_length": 226, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013424" + ], + [ + "gene_synonym", + "ECK4090" + ], + [ + "gene_synonym", + "EcoGene:EG10720" + ], + [ + "gene_synonym", + "GI:49176459" + ], + [ + "gene_synonym", + "GeneID:948611" + ], + [ + "gene_synonym", + "JW5727" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16678" + ], + [ + "gene_synonym", + "YP_026282.1" + ], + [ + "gene_synonym", + "b4097" + ], + [ + "gene_synonym", + "phnK" + ] + ], + "dna_sequence": "ATGAATCAACCGTTACTTTCGGTCAATAACCTGACCCACCTTTACGCGCCGGGCAAAGGCTTTAGCGATGTCTCTTTTGATTTATGGCCGGGGGAAGTGCTGGGCATTGTCGGGGAATCCGGCTCCGGGAAGACCACGCTGCTGAAGTCGATCTCCGCGCGCCTGACGCCGCAGCAGGGGGAAATTCACTACGAGAACCGTTCGCTGTATGCAATGAGCGAGGCCGACCGCCGTCGCCTGCTGCGTACCGAATGGGGCGTGGTGCATCAGCATCCACTCGACGGCCTGCGCCGCCAGGTGTCGGCAGGCGGCAATATCGGCGAGCGGCTGATGGCGACCGGGGCACGTCATTACGGCGATATTCGTGCCACCGCGCAGAAGTGGCTGGAAGAGGTGGAGATTCCCGCCAACCGGATCGACGACCTGCCGACCACCTTTTCCGGCGGTATGCAGCAGCGTTTGCAGATTGCCCGCAACCTGGTGACGCATCCGAAGCTGGTGTTTATGGATGAACCGACCGGCGGGCTGGATGTGTCGGTGCAGGCCCGCCTGCTCGACCTGCTGCGCGGCCTGGTGGTGGAGCTGAACCTCGCGGTGGTGATTGTCACCCATGATTTAGGCGTCGCCCGCCTGCTGGCGGACCGTTTGCTGGTGATGAAGCAGGGGCAAGTGGTGGAGAGTGGGTTAACCGACCGCGTGCTCGACGACCCGCATCATCCGTATACACAGCTGCTGGTGTCATCGGTTTTGCAGAATTGA", + "dna_sequence_length": 759, + "functions": [ + "carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein" + ], + "id": "CDS_4015", + "location": [ + [ + "NC_000913", + 4318764, + "-", + 759 + ] + ], + "md5": "076dc3cb2b121617cb0487612bf9e752", + "parent_gene": "", + "protein_md5": "61b241bb2a88b10c6874b7bcb0dd22e5", + "protein_translation": "MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013426" + ], + [ + "gene_synonym", + "ECK4091" + ], + [ + "gene_synonym", + "EcoGene:EG10719" + ], + [ + "gene_synonym", + "GI:16131924" + ], + [ + "gene_synonym", + "GeneID:948606" + ], + [ + "gene_synonym", + "JW4059" + ], + [ + "gene_synonym", + "NP_418522.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16688" + ], + [ + "gene_synonym", + "b4098" + ], + [ + "gene_synonym", + "phnJ" + ] + ], + "dna_sequence": "ATGGCTAATCTGAGCGGCTACAACTTTGCCTACCTCGACGAGCAGACCAAACGCATGATCCGCCGCGCCATCTTAAAAGCGGTGGCGATCCCCGGTTATCAGGTGCCGTTTGGCGGGCGCGAGATGCCGATGCCGTACGGCTGGGGAACCGGCGGCATTCAGCTTACCGCCAGCGTGATTGGCGAAAGCGACGTGCTGAAGGTGATTGACCAGGGCGCGGATGACACCACCAACGCCGTGTCGATTCGCAACTTCTTCAAGCGCGTGACCGGGGTAAACACCACGGAACGTACGGACGATGCGACGGTTATCCAGACGCGTCACCGCATCCCCGAAACGCCGCTGACCGAAGATCAGATAATTATCTTCCAGGTGCCAATCCCCGAGCCGCTGCGCTTTATCGAGCCGCGCGAAACGGAAACCCGCACCATGCACGCGCTGGAAGAGTACGGCGTGATGCAGGTGAAACTGTATGAAGATATCGCCCGCTTCGGTCATATCGCCACCACCTACGCCTATCCGGTGAAGGTAAATGGGCGCTACGTGATGGACCCGTCGCCGATCCCGAAATTCGATAACCCAAAAATGGACATGATGCCCGCCCTGCAACTGTTCGGCGCGGGGCGCGAGAAGCGCATCTATGCGGTGCCGCCGTTTACCCGCGTGGAAAGTCTCGATTTCGACGATCACCCGTTCACCGTTCAGCAGTGGGATGAGCCATGCGCCATCTGCGGATCGACCCACAGCTATCTTGATGAAGTGGTGCTGGATGACGCCGGAAACCGCATGTTTGTCTGCTCCGATACCGATTATTGCCGCCAACAGAGCGAGGCAAAAAACCAATGA", + "dna_sequence_length": 846, + "functions": [ + "carbon-phosphorus lyase, SAM-dependent" + ], + "id": "CDS_4016", + "location": [ + [ + "NC_000913", + 4319606, + "-", + 846 + ] + ], + "md5": "68394bb29742859ae9dfd817c23881d1", + "parent_gene": "", + "protein_md5": "0f13a80e5737f0674b77598e88928e8c", + "protein_translation": "MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ", + "protein_translation_length": 281, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013428" + ], + [ + "gene_synonym", + "ECK4092" + ], + [ + "gene_synonym", + "EcoGene:EG10718" + ], + [ + "gene_synonym", + "GI:16131925" + ], + [ + "gene_synonym", + "GeneID:948605" + ], + [ + "gene_synonym", + "JW4060" + ], + [ + "gene_synonym", + "NP_418523.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16687" + ], + [ + "gene_synonym", + "b4099" + ], + [ + "gene_synonym", + "phnI" + ] + ], + "dna_sequence": "ATGTACGTTGCCGTGAAAGGGGGCGAGAAGGCGATCGACGCCGCCCACGCCCTGCAAGAGAGCCGACGCCGAGGCGATACCGATTTGCCCGAACTGAGCGTCGCCCAGATTGAACAGCAGCTTAACCTCGCGGTAGATCGCGTGATGACCGAAGGCGGCATTGCCGACCGCGAACTGGCGGCGCTGGCGCTGAAACAGGCCAGCGGCGATAACGTTGAAGCGATTTTCCTGCTGCGCGCCTACCGCACCACGTTGGCGAAGCTGGCGGTAAGCGAGCCGCTCGACACCACCGGGATGCGTCTCGAACGCCGTATCTCCGCCGTTTATAAAGACATTCCCGGCGGCCAGCTGCTTGGCCCAACCTACGACTACACCCATCGCCTGCTCGATTTTACCCTGCTGGCAAACGGCGAAGCGCCGACGCTGACCACCGCCGACAGCGAACAGCAGCCGTCGCCGCACGTTTTCAGCCTGCTGGCGCGTCAGGGGCTGGCGAAGTTTGAAGAGGATAGCGGCGCACAGCCGGATGACATCACCCGCACGCCGCCGGTTTACCCCTGCTCACGCTCCTCCCGTTTGCAGCAGTTGATGCGCGGCGACGAAGGCTATTTGCTGGCGCTGGCCTACTCCACCCAACGCGGTTACGGGCGCAATCACCCGTTCGCAGGCGAGATCCGCAGCGGCTATATCGACGTGTCGATTGTGCCGGAAGAGCTGGGATTTGCGGTGAACGTCGGCGAACTGCTGATGACTGAGTGTGAAATGGTTAACGGTTTTATCGACCCGCCGGGTGAGCCGCCGCACTTCACGCGCGGCTACGGGCTGGTGTTCGGCATGAGCGAGCGCAAAGCGATGGCGATGGCGCTGGTCGACCGCGCTCTGCAAGCCCCGGAGTACGGCGAGCACGCGACAGGCCCGGCGCAGGATGAAGAGTTCGTGCTGGCACATGCCGACAACGTCGAAGCCGCAGGCTTTGTCTCACACCTCAAACTCCCCCACTACGTCGATTTCCAGGCCGAACTGGAGCTACTCAAACGTCTGCAACAGGAGCAGAACCATGGCTAA", + "dna_sequence_length": 1065, + "functions": [ + "ribophosphonate triphosphate synthase complex putative catalytic subunit" + ], + "id": "CDS_4017", + "location": [ + [ + "NC_000913", + 4320663, + "-", + 1065 + ] + ], + "md5": "fa4ab48291a5633dd2ca7abc1e1d43f3", + "parent_gene": "", + "protein_md5": "d169d6a0f436aead0739b26d105bfa1e", + "protein_translation": "MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSGYIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013430" + ], + [ + "gene_synonym", + "ECK4093" + ], + [ + "gene_synonym", + "EcoGene:EG10717" + ], + [ + "gene_synonym", + "GI:16131926" + ], + [ + "gene_synonym", + "GeneID:948619" + ], + [ + "gene_synonym", + "JW4061" + ], + [ + "gene_synonym", + "NP_418524.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16686" + ], + [ + "gene_synonym", + "b4100" + ], + [ + "gene_synonym", + "phnH" + ] + ], + "dna_sequence": "ATGACCCTGGAAACCGCTTTTATGCTTCCCGTGCAGGATGCCCAGCACAGTTTTCGTCGCCTGTTAAAGGCCATGAGCGAGCCGGGCGTGATTGTCGCCCTGCATCAGCTCAAACGCGGCTGGCAACCGCTGAATATCGCCACCACCAGCGTGCTGCTGACGCTGGCCGATAACGACACGCCGGTGTGGCTTTCTACCCCATTAAATAACGATATCGTCAACCAGAGCCTGCGTTTTCATACCAACGCGCCGCTGGTCAGCCAGCCGGAACAGGCGACCTTCGCGGTGACGGATGAGGCGATTTCCAGCGAACAGCTCAACGCCCTTTCCACCGGCACCGCCGTTGCGCCGGAAGCGGGTGCGACGCTGATTTTACAGGTCGCCAGCCTGAGCGGCGGACGCATGTTGCGCCTTACTGGTGCGGGTATTGCCGAAGAACGAATGATCGCTCCGCAGCTGCCGGAGTGCATTCTGCACGAACTCACCGAGCGCCCGCATCCGTTCCCGCTCGGCATCGACCTGATCCTGACCTGTGGCGAGCGCCTGCTGGCTATTCCGCGAACCACTCATGTGGAGGTGTGCTGA", + "dna_sequence_length": 585, + "functions": [ + "ribophosphonate triphosphate synthase subunit" + ], + "id": "CDS_4018", + "location": [ + [ + "NC_000913", + 4321247, + "-", + 585 + ] + ], + "md5": "7e49147880dbd71e78c49d6f2d6ba94c", + "parent_gene": "", + "protein_md5": "22350176e87775db2c0aa7035f23200b", + "protein_translation": "MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013433" + ], + [ + "gene_synonym", + "ECK4094" + ], + [ + "gene_synonym", + "EcoGene:EG10716" + ], + [ + "gene_synonym", + "GI:16131927" + ], + [ + "gene_synonym", + "GeneID:948618" + ], + [ + "gene_synonym", + "JW4062" + ], + [ + "gene_synonym", + "NP_418525.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16685" + ], + [ + "gene_synonym", + "b4101" + ], + [ + "gene_synonym", + "phnG" + ] + ], + "dna_sequence": "ATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGCACAGCCAACCGGCTGAACTGGCAGCACGCCTGAACGCGCTAAACATCACCGCCGACTATGAGGTGATCCGCGCCGCTGAAACTGGCCTGGTACAGATTCAGGCGCGGATGGGCGGCACCGGCGAACGTTTTTTTGCCGGCGACGCCACGCTGACCCGCGCCGCCGTGCGCCTGACTGACGGCACGCTCGGCTACAGCTGGGTGCAGGGGCGTGATAAACAGCACGCCGAACGCTGCGCGCTGATTGACGCGCTGATGCAGCAATCTCGCCACTTTCAAAACTTATCAGAAACCCTTATTGCCCCGCTGGACGCTGACCGTATGGCACGCATTGCCGCACGCCAGGCCGAAGTGAACGCCAGCCGGGTCGACTTCTTTACGATGGTTCGCGGAGACAACGCATGA", + "dna_sequence_length": 453, + "functions": [ + "ribophosphonate triphosphate synthase subunit" + ], + "id": "CDS_4019", + "location": [ + [ + "NC_000913", + 4321696, + "-", + 453 + ] + ], + "md5": "28075c47f87fb1c255d00a1d09536c11", + "parent_gene": "", + "protein_md5": "1c69ff60d02136dde58a5ff5288e504f", + "protein_translation": "MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEVIRAAETGLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVQGRDKQHAERCALIDALMQQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013435" + ], + [ + "gene_synonym", + "ECK4095" + ], + [ + "gene_synonym", + "EcoGene:EG10715" + ], + [ + "gene_synonym", + "GI:16131928" + ], + [ + "gene_synonym", + "GeneID:948617" + ], + [ + "gene_synonym", + "JW4063" + ], + [ + "gene_synonym", + "NP_418526.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16684" + ], + [ + "gene_synonym", + "b4102" + ], + [ + "gene_synonym", + "phnF" + ] + ], + "dna_sequence": "ATGCACTTGTCTACACATCCGACCAGCTACCCAACACGCTATCAAGAGATAGCCGCAAAACTTGAGCAGGAGCTTCGTCAACACTACCGCTGCGGCGACTATCTTCCCGCCGAGCAGCAACTGGCAGCGCGCTTTGAGGTGAATCGCCACACCCTGCGCCGCGCCATCGACCAACTGGTGGAAAAAGGCTGGGTACAGCGCCGTCAGGGCGTCGGCGTGCTGGTGCTGATGCGCCCGTTCGATTACCCGCTCAACGCCCAGGCGCGTTTTAGCCAGAATCTGCTGGATCAGGGCAGCCATCCCACCAGCGAAAAACTGCTTTCGGTATTGCGCCCCGCGTCCGGCCACGTCGCTGACGCACTGGGGATTACCGAGGGGGAGAACGTCATCCACCTGCGCACCCTGCGTCGTGTCAACGGCGTCGCGCTCTGTTTAATCGACCACTACTTCGCGGACCTCACCCTCTGGCCGACGCTGCAACGCTTCGACAGCGGCTCGCTGCACGATTTTCTGCGCGAGCAAACCGGAATTGCGCTGCGCCGCAGCCAGACGCGGATCAGCGCCCGCCGCGCCCAGGCCAAAGAGTGCCAGCGTCTTGAAATCCCGAATATGTCGCCGCTGCTGTGCGTGCGCACCCTTAACCACCGTGACGGTGAAAGCAGCCCGGCGGAGTACTCCGTCAGCCTGACGCGCGCCGACATGATTGAATTCACTATGGAGCACTGA", + "dna_sequence_length": 726, + "functions": [ + "putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation" + ], + "id": "CDS_4020", + "location": [ + [ + "NC_000913", + 4322422, + "-", + 726 + ] + ], + "md5": "a69c0f225fae756ec99381f25b211c30", + "parent_gene": "", + "protein_md5": "289a3f4638cace139158e1e465e15ff6", + "protein_translation": "MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFTMEH", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013437" + ], + [ + "gene_synonym", + "ASAP:ABE-0013439" + ], + [ + "gene_synonym", + "ECK4096" + ], + [ + "gene_synonym", + "EcoGene:EG11283" + ], + [ + "gene_synonym", + "GeneID:948625" + ], + [ + "gene_synonym", + "JW4064" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16683" + ], + [ + "gene_synonym", + "b4104" + ], + [ + "gene_synonym", + "phnE" + ] + ], + "dna_sequence": "ATGCAAACCATCACCATCGCCCCACCCAAGCGCAGCTGGTTCTCGCTTCTGAGCTGGGCCGTTGTACTCGCCGTGTTGGTCGTCTCGTGGCAGGGCGCGGAAATGGCCCCGCTTACGCTGATCAAAGACGGCGGCAACATGGCGACGTTCGCCGCCGACTTCTTCCCGCCCGATTTCAGCCAGTGGCAGGATTACCTCACCGAAATGGCCGTCACGCTGCAAATCGCCGTCTGGGGCACCGCGCTGGCGGTGGTTCTCTCCATCCCCTTTGGCCTGATGAGCGCCGAAAACCTGGTGCCGTGGTGGGTTTACCAGCCCGTTCGCCGCCTGATGGACGCCTGCCGCGCCATTAACGAAATGGTCTTCGCCATGCTGTTCGTGGTCGCCGTCGGCCTCGGCCCGTTCGCTGGCGTGCTGGCGTGCTGGGGCGTGCTGGCGCTGTTTATCCACACCACCGGCGTGCTCTCCAAGCTGCTTTCCGAAGCGGTGGAAGCGATTGAGCCCGGCCCGGTGGAAGGCATTCGCGCCACCGGTGCCAACAAGCTCGAAGAGATCCTCTACGGCGTGCTGCCACAGGTGATGCCACTGCTGATCTCCTACTCCCTCTATCGCTTCGAATCCAACGTCCGCTCGGCGACCGTCGTCGGCATGGTCGGCGCAGGCGGGATCGGCGTCACCCTGTGGGAAGCGATTCGCGGTTTCCAGTTCCAACAAACCTGCGCCCTGATGGTGCTTATCATCGTCACGGTCAGCCTGCTGGATTTCCTCTCTCAACGGTTGCGTAAGCACTTTATCTGA", + "dna_sequence_length": 798, + "id": "CDS_4021", + "location": [ + [ + "NC_000913", + 4323230, + "-", + 426 + ], + [ + "NC_000913", + 4322814, + "-", + 372 + ] + ], + "md5": "3158c470db9c22da957fc9fd89a5f210", + "parent_gene": "", + "protein_md5": "5308139fd777c5f0b89b0ac9bd78bc04", + "protein_translation": "MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDGGNMATFAADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWWVYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLACWGVLALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013442" + ], + [ + "gene_synonym", + "ECK4098" + ], + [ + "gene_synonym", + "EcoGene:EG10714" + ], + [ + "gene_synonym", + "GI:16131931" + ], + [ + "gene_synonym", + "GeneID:948624" + ], + [ + "gene_synonym", + "JW4066" + ], + [ + "gene_synonym", + "NP_418529.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16682" + ], + [ + "gene_synonym", + "b4105" + ], + [ + "gene_synonym", + "phnD" + ], + [ + "gene_synonym", + "psiD" + ] + ], + "dna_sequence": "ATGAACGCTAAGATAATTGCCTCGCTGGCCTTCACCAGCATGTTCAGCCTCAGCACCCTGTTAAGCCCGGCGCACGCCGAAGAGCAGGAAAAGGCGTTGAATTTCGGCATTATTTCAACGGAATCACAGCAAAACCTGAAACCGCAATGGACGCCGTTCTTGCAGGATATGGAGAAGAAGCTGGGCGTGAAGGTCAACGCCTTCTTTGCCCCGGACTACGCGGGCATTATCCAGGGGATGCGCTTCAATAAAGTGGATATCGCCTGGTACGGCAATCTGTCGGCGATGGAAGCGGTGGATCGCGCCAATGGCCAGGTCTTCGCCCAGACGGTCGCGGCGGATGGATCGCCGGGTTACTGGAGCGTGTTGATCGTCAACAAAGACAGTCCGATCAACAACCTGAACGATCTGCTGGCGAAGCGGAAAGATCTCACCTTTGGCAATGGCGATCCTAACTCCACCTCTGGCTTCCTCGTCCCCGGCTACTACGTCTTCGCCAAAAACAATATCTCCGCCAGCGACTTCAAGCGCACCGTCAACGCCGGGCATGAAACCAACGCGCTGGCCGTCGCCAACAAGCAGGTGGATGTTGCCACCAACAACACCGAAAACCTCGACAAGCTGAAAACCTCCGCGCCAGAGAAGCTGAAAGAACTGAAGGTGATCTGGAAGTCGCCGCTGATCCCAGGCGATCCGATCGTCTGGCGCAAGAATCTTTCCGAAACCACCAAAGACAAGATCTACGACTTCTTTATGAACTACGGCAAAACGCCGGAAGAAAAAGCGGTGCTGGAACGCCTGGGCTGGGCGCCATTCCGCGCTTCCAGCGACCTGCAACTGGTGCCGATTCGCCAGCTCGCGCTGTTTAAAGAGATGCAGGGCGTGAAAAGCAATAAAGGACTGAATGAGCAGGACAAGCTGGCAAAAACCACCGAGATTCAGGCGCAGCTGGATGACCTGGACCGCCTGAACAACGCGCTAAGCGCGATGAGTTCGGTGAGTAAAGCGGTGCAGTAA", + "dna_sequence_length": 1017, + "functions": [ + "phosphonate ABC transporter periplasmic binding protein" + ], + "id": "CDS_4022", + "location": [ + [ + "NC_000913", + 4324352, + "-", + 1017 + ] + ], + "md5": "d39fa2733d00e6ae08235c0c44a5629c", + "parent_gene": "", + "protein_md5": "82913b8f4968401e1b65d62df6913dc2", + "protein_translation": "MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQNLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVSKAVQ", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013444" + ], + [ + "gene_synonym", + "ECK4099" + ], + [ + "gene_synonym", + "EcoGene:EG10713" + ], + [ + "gene_synonym", + "GI:16131932" + ], + [ + "gene_synonym", + "GeneID:948623" + ], + [ + "gene_synonym", + "JW4067" + ], + [ + "gene_synonym", + "NP_418530.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16677" + ], + [ + "gene_synonym", + "b4106" + ], + [ + "gene_synonym", + "phnC" + ] + ], + "dna_sequence": "ATGCAAACGATTATCCGTGTCGAGAAGCTCGCCAAAACCTTCAATCAGCATCAGGCGCTGCATGCGGTTGATCTGAACATTCATCACGGTGAAATGGTGGCTCTGCTTGGGCCGTCGGGTTCCGGAAAATCCACCCTTTTACGTCACTTAAGCGGTTTGATTACCGGCGATAAATCTGTCGGTAGCCATATCGAGCTGCTGGGCCGCACAGTCCAGCGCGAAGGCCGCCTGGCCCGCGATATCCGCAAAAGCCGCGCCCATACCGGCTACATATTCCAACAATTCAACCTGGTGAACCGCCTGAGCGTACTGGAGAACGTGCTGATTGGCGCGCTCGGCAGCACGCCGTTCTGGCGCACCTGTTTTAGCTGGTTCACCGGCGAGCAGAAACAGCGCGCGTTACAGGCGCTGACCCGCGTTGGCATGGTGCATTTTGCCCATCAGCGCGTTTCCACCCTCTCCGGCGGCCAGCAGCAACGTGTGGCGATTGCCCGTGCGCTGATGCAGCAGGCGAAAGTGATTCTGGCCGATGAACCCATCGCCTCGCTGGACCCAGAATCAGCGCGCATCGTGATGGACACCCTGCGCGACATCAACCAGAACGACGGCATCACCGTGGTCGTCACGCTGCATCAGGTGGATTACGCCCTGCGCTACTGCGAACGCATCGTCGCCCTGCGCCAGGGGCACGTCTTCTACGACGGCAGCAGCCAACAGTTTGATAACGAACGTTTTGACCATCTCTACCGCAGCATTAACCGCGTCGAAGAGAACGCGAAAGCTGCCTGA", + "dna_sequence_length": 789, + "functions": [ + "phosphonate ABC transporter ATPase" + ], + "id": "CDS_4023", + "location": [ + [ + "NC_000913", + 4325165, + "-", + 789 + ] + ], + "md5": "8806ad2d78f8377ee6907f25c0735c0d", + "parent_gene": "", + "protein_md5": "35deea7053d693469598c74c923297c1", + "protein_translation": "MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRVEENAKAA", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013447" + ], + [ + "gene_synonym", + "ECK4100" + ], + [ + "gene_synonym", + "EcoGene:EG10712" + ], + [ + "gene_synonym", + "GI:16131933" + ], + [ + "gene_synonym", + "GeneID:948622" + ], + [ + "gene_synonym", + "JW4068" + ], + [ + "gene_synonym", + "NP_418531.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16681" + ], + [ + "gene_synonym", + "b4107" + ], + [ + "gene_synonym", + "phnB" + ], + [ + "gene_synonym", + "yjdN" + ] + ], + "dna_sequence": "ATGCCGTTAAGTCCCTACCTCTCTTTTGCCGGTAACTGTTCCGACGCGATTGCCTATTATCAACGTACGTTGGGCGCGGAACTGCTCTATAAAATCAGCTTCGGCGAAATGCCAAAATCAGCGCAGGACAGCGCCGAGAACTGCCCTTCCGGAATGCAATTTCCCGATACCGCCATCGCCCACGCCAATGTGCGCATTGCCGGAAGCGACATCATGATGAGCGATGCCATGCCGTCAGGAAAAGCCAGCTACTCCGGCTTTACGCTGGTGCTCGATTCGCAACAGGTCGAAGAAGGAAAACGCTGGTTTGACAATCTTGCCGCTAACGGAAAAATCGAAATGGCCTGGCAGGAAACTTTCTGGGCGCATGGCTTTGGCAAAGTCACCGATAAATTTGGCGTACCGTGGATGATTAATGTCGTCAAACAACAACCAACGCAATAA", + "dna_sequence_length": 444, + "functions": [ + "metalloprotein superfamily protein" + ], + "id": "CDS_4024", + "location": [ + [ + "NC_000913", + 4325741, + "-", + 444 + ] + ], + "md5": "ec53e2a8fe9d2efed747adebbb082817", + "parent_gene": "", + "protein_md5": "7a4ac01db26900e8df8cfd7017aa84f2", + "protein_translation": "MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAMPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013451" + ], + [ + "gene_synonym", + "ECK4101" + ], + [ + "gene_synonym", + "EcoGene:EG10711" + ], + [ + "gene_synonym", + "GI:16131934" + ], + [ + "gene_synonym", + "GeneID:948621" + ], + [ + "gene_synonym", + "JW4069" + ], + [ + "gene_synonym", + "NP_418532.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ1" + ], + [ + "gene_synonym", + "b4108" + ], + [ + "gene_synonym", + "phnA" + ], + [ + "gene_synonym", + "yjdM" + ] + ], + "dna_sequence": "ATGTCATTACCACACTGCCCAAAATGCAACTCCGAATACACCTACGAAGATAACGGCATGTACATCTGCCCGGAATGTGCCTACGAATGGAACGACGCAGAACCTGCACAGGAAAGCGACGAGCTGATCGTTAAAGATGCTAACGGCAATCTGCTGGCTGACGGCGACAGCGTTACCATCATTAAAGATCTGAAGGTGAAAGGTAGCTCTTCGATGCTGAAAATTGGCACCAAAGTGAAAAACATCCGCCTGGTTGAAGGCGACCATAACATCGATTGCAAAATCGACGGTTTTGGTCCGATGAAACTGAAATCTGAGTTTGTGAAAAAGAACTGA", + "dna_sequence_length": 336, + "functions": [ + "zinc-ribbon family protein" + ], + "id": "CDS_4025", + "location": [ + [ + "NC_000913", + 4326734, + "-", + 336 + ] + ], + "md5": "5e99b928afcbaa224351a17b34e16b45", + "parent_gene": "", + "protein_md5": "871bc0247fd44481964047fde32973d0", + "protein_translation": "MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013456" + ], + [ + "gene_synonym", + "ECK4102" + ], + [ + "gene_synonym", + "EcoGene:EG11210" + ], + [ + "gene_synonym", + "GI:16131935" + ], + [ + "gene_synonym", + "GeneID:948620" + ], + [ + "gene_synonym", + "JW4070" + ], + [ + "gene_synonym", + "NP_418533.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16694" + ], + [ + "gene_synonym", + "b4109" + ], + [ + "gene_synonym", + "crfC" + ], + [ + "gene_synonym", + "yjdA" + ] + ], + "dna_sequence": "ATGTACACACAGACCCTGTATGAGTTAAGTCAGGAGGCTGAACGCCTGTTACAGCTTTCTCGCCAACAGTTGCAGTTACTGGAAAAAATGCCTCTCTCTGTACCCGGAGACGACGCGCCACAACTGGCTTTACCCTGGAGTCAGCCTAATATCGCCGAACGTCACGCGATGCTGAATAATGAGTTGCGTAAAATTTCCCGACTGGAAATGGTGCTTGCAATTGTCGGTACCATGAAAGCAGGGAAATCAACCACCATTAATGCCATTGTTGGTACGGAGGTTCTGCCTAATCGTAATCGCCCAATGACTGCGCTGCCGACGCTTATTCGCCATACGCCCGGGCAAAAGGAACCGGTACTGCATTTTTCACATGTCGCGCCAATCGATTGTTTAATTCAACAATTACAACAGCGCCTGCGTGATTGCGATATTAAGCATCTGACCGATGTGCTGGAAATAGATAAAGATATGCGTGCGCTTATGCAGCGGATCGAAAATGGCGTCGCTTTCGAAAAATATTATCTGGGTGCCCAGCCTATTTTTCATTGTCTGAAAAGTTTGAATGATTTAGTGCGACTGGCGAAGGCGCTGGACGTCGATTTTCCTTTTTCTGCTTACGCCGCCATTGAGCATATTCCCGTGATTGAAGTGGAGTTTGTCCATCTAGCGGGGCTGGAGAGTTATCCCGGTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCTGTACGTGCTGGTCAATAAGTTCGATCAACAGGATCGTAACAGTGACGACGCCGACCAGGTGCGGGCACTGATTTCCGGGACGCTGATGAAAGGCTGTATTACGCCACAGCAGATATTTCCGGTGTCGTCGATGTGGGGCTACCTGGCGAATCGGGCGCGCTATGAGTTAGCCAACAACGGTAAGTTACCACCGCCAGAGCAACAACGCTGGGTGGAAGATTTTGCCCATGCCGCGCTTGGCAGGCGCTGGCGTCATGCCGATCTGGCGGACCTCGAACATATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGCTGTTCGCCCAGCCAATTCAGGCGTTGCTTCATGCCGCTTACGCTAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTCGCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGTTTTTCACGGCGTAGTTCCCCACTTCAACACTCGCCAGCTGTTCAGTGAAGTCATTTCGCGCCAGGAAGCAACGGACGAGCAGAGCACGCGTTTAGGCGTTGTGCGTGAGACTTTTTCGCGCTGGTTGAATCAGCCCGACTGGGGACGGGGAAATGAGAAATCACCGACAGAAACGGTTGATTACAGTGTGTTGCAACGAGCATTAAGCGCAGAAGTCGATCTCTATTGCCAACAAATGGCTAAAGTTCTGGCAGAGCAGGTCGATGAATCTGTTACGGCAGGCATGAATACTTTTTTCGCTGAGTTCGCTTCATGTTTGACGGAATTACAGACGCGTTTACGCGAAAGTCTGGCTCTGCGTCAACAAAATGAATCGGTGGTCAGGCTGATGCAGCAGCAATTGCAGCAGACTGTGATGACTCACGGCTGGATTTACACCGACGCCCAGCTGTTACGCGATGATATTCAAACACTTTTCACGGCAGAACGATATTGA", + "dna_sequence_length": 2229, + "functions": [ + "clamp-binding sister replication fork colocalization protein, dynamin-related" + ], + "id": "CDS_4026", + "location": [ + [ + "NC_000913", + 4327135, + "+", + 2229 + ] + ], + "md5": "053bc77348b3707929bad36327451ab1", + "parent_gene": "", + "protein_md5": "65d0114f477c44d7f15362a1990b1149", + "protein_translation": "MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAPQLALPWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARYELANNGKLPPPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQLRQNIHQIEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALKVQLAALFQDDSEPLSEIRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPDWGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAERY", + "protein_translation_length": 742, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013459" + ], + [ + "gene_synonym", + "ECK4103" + ], + [ + "gene_synonym", + "EcoGene:EG12460" + ], + [ + "gene_synonym", + "GI:90111687" + ], + [ + "gene_synonym", + "GeneID:948633" + ], + [ + "gene_synonym", + "JW5729" + ], + [ + "gene_synonym", + "NP_418534.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39267" + ], + [ + "gene_synonym", + "b4110" + ], + [ + "gene_synonym", + "yjcZ" + ] + ], + "dna_sequence": "TTGACCAAGACGTTACTTGACGGCCCCGGTCGCGTGCTGGAGTCGGTTTATCCCCGCTTTTTAGTGGATCTGGCGCAGGGTGATGATGCCCGCCTTCCACAAGCCCATCAGCAGCAGTTTCGTGAACGACTGATGCAGGAACTTCTTTCGCGTGTGCAGCTTCAGACATGGACGAACGGCGGCATGTTAAATGCGCCGCTTAGCCTGCGTCTGACATTGGTGGAAAAACTGGCGTCGATGCTGGATCCCGGTCATCTGGCACTGACGCAGATCGCGCAGCATCTGGCGCTGCTGCAAAAAATGGATCACCGCCAGCACTCTGCTTTCCCGGAGCTCCCCCAGCAAATTGCCGCCTTGTATGAGTGGTTTTCAGCCCGTTGTCGCTGGAAGGAAAAGGCGTTAACGCAACGAGGCCTACTGGTGCAGGCAGGTGATCAGAGCGAGCAAATTTTTACCCGCTGGCGTGCTGGGGCGTATAACGCCTGGTCGTTGCCTGGGCGCTGTTTTATCGTTCTGGAGGAGTTGCGCTGGGGGGCATTTGGCGATGCCTGCCGTCTGGGAAGCCCGCAAGCGGTGGCGTTGTTGCTGGGTGATTTGCTCGAGAAAGCGACACAACATCTGGCAGAGAGTATCAATGCGGCACCGACCACGCGTCACTATTACCATCAGTGGTTTGCCTCTTCGACCGTTCCGACGGGCGGGGAGCATGCTGATTTTTTAAGTTGGCTGGGAAAGTGGACCACGGCAGATAAACAACCCGTTTGCTGGTCAGTGACCCAACGCTGGCAAACTGTCGCGCTGGGGATGCCACGACTCTGTTCAGCGCAGCGTCTGGCGGGGGCAATGCTCGAGGAAATCTTCTCTGTAAATTTGGCGTAA", + "dna_sequence_length": 879, + "functions": [ + "YjcZ family protein", + "yhjH motility defect suppressor" + ], + "id": "CDS_4027", + "location": [ + [ + "NC_000913", + 4329360, + "+", + 879 + ] + ], + "md5": "df62e5f730ba57aaa4a9988e8eaaa96e", + "parent_gene": "", + "protein_md5": "40973759035e491a7aa0e783444dbf64", + "protein_translation": "MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNLA", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013462" + ], + [ + "gene_synonym", + "ECK4104" + ], + [ + "gene_synonym", + "EcoGene:EG11612" + ], + [ + "gene_synonym", + "GI:16131937" + ], + [ + "gene_synonym", + "GeneID:948626" + ], + [ + "gene_synonym", + "JW4072" + ], + [ + "gene_synonym", + "NP_418535.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0C0L7" + ], + [ + "gene_synonym", + "b4111" + ], + [ + "gene_synonym", + "proP" + ] + ], + "dna_sequence": "ATGCTGAAAAGGAAAAAAGTAAAACCGATTACCCTTCGTGATGTCACCATTATTGATGACGGTAAACTGCGTAAAGCCATTACCGCAGCATCACTGGGTAATGCAATGGAATGGTTCGATTTTGGTGTTTATGGTTTTGTTGCTTACGCATTAGGTAAAGTTTTTTTCCCGGGGGCTGACCCCAGCGTGCAGATGGTTGCTGCACTTGCCACTTTCTCCGTTCCCTTTCTGATTCGACCGCTTGGCGGACTCTTCTTTGGTATGTTGGGCGATAAATATGGTCGCCAGAAGATCCTCGCTATCACTATTGTGATTATGTCGATCAGTACGTTCTGTATTGGCTTAATACCGTCCTACGACACGATTGGTATTTGGGCACCGATTCTGCTGTTGATCTGTAAGATGGCACAAGGTTTCTCGGTCGGCGGTGAATATACCGGGGCGTCGATATTTGTTGCGGAATACTCCCCTGACCGTAAACGTGGCTTTATGGGCAGCTGGCTGGACTTCGGTTCTATTGCCGGGTTTGTGCTGGGTGCGGGCGTGGTGGTGTTAATTTCGACCATTGTCGGCGAAGCGAACTTCCTCGATTGGGGCTGGCGTATTCCGTTCTTTATCGCTCTGCCGTTAGGGATTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGACTTACTACATGTTGCTGACCTATATGCCGAGTTATTTGTCGCATAACCTGCATTACTCCGAAGACCACGGGGTGCTGATTATTATCGCCATTATGATCGGTATGCTGTTTGTCCAGCCGGTGATGGGCTTGCTGAGTGACCGTTTTGGCCGTCGTCCGTTTGTGCTACTTGGTAGTGTTGCCCTGTTTGTGTTGGCGATCCCGGCGTTTATTCTGATTAACAGTAACGTCATCGGCCTGATTTTTGCCGGGTTACTGATGCTGGCGGTGATCCTTAACTGCTTTACGGGCGTTATGGCTTCTACCTTGCCAGCGATGTTCCCGACGCATATCCGTTACAGCGCGCTGGCGGCGGCATTTAATATTTCGGTGCTGGTTGCCGGTCTGACGCCAACGCTGGCGGCCTGGCTGGTCGAAAGCTCGCAGAATCTGATGATGCCTGCCTATTACCTGATGGTAGTGGCGGTGGTTGGTTTAATCACCGGCGTAACCATGAAAGAGACGGCAAATCGTCCGTTGAAAGGTGCGACACCGGCGGCGTCAGATATACAGGAAGCGAAGGAAATTCTCGTCGAGCATTACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAA", + "dna_sequence_length": 1503, + "functions": [ + "proline/glycine betaine transporter" + ], + "id": "CDS_4028", + "location": [ + [ + "NC_000913", + 4330502, + "+", + 1503 + ] + ], + "md5": "e2cb91e8c042b1d3353b8ed4344365c5", + "parent_gene": "", + "protein_md5": "5a9e22725a4e1db2084741b8bfe7124b", + "protein_translation": "MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVVGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHYDNIEQKIDDIDHEIADLQAKRTRLVQQHPRIDE", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4515" + ], + [ + "gene_synonym", + "EcoGene:EG14499" + ], + [ + "gene_synonym", + "GI:345452724" + ], + [ + "gene_synonym", + "GeneID:11115379" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:G3MTW7" + ], + [ + "gene_synonym", + "YP_004831120.1" + ], + [ + "gene_synonym", + "b4703" + ], + [ + "gene_synonym", + "pmrR" + ] + ], + "dna_sequence": "ATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGA", + "dna_sequence_length": 90, + "functions": [ + "putative membrane-bound BasS regulator" + ], + "id": "CDS_4029", + "location": [ + [ + "NC_000913", + 4332116, + "+", + 90 + ] + ], + "md5": "e4486611a98bdbcf95fa61692e9a4166", + "parent_gene": "", + "protein_md5": "609abafe5334aa00f725dff12740eb57", + "protein_translation": "MKNRVYESLTTVFSVLVVSSFLYIWFATY", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013464" + ], + [ + "gene_synonym", + "ECK4105" + ], + [ + "gene_synonym", + "EcoGene:EG11614" + ], + [ + "gene_synonym", + "GI:16131938" + ], + [ + "gene_synonym", + "GeneID:948632" + ], + [ + "gene_synonym", + "JW4073" + ], + [ + "gene_synonym", + "NP_418536.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30844" + ], + [ + "gene_synonym", + "b4112" + ], + [ + "gene_synonym", + "basS" + ], + [ + "gene_synonym", + "pmrB" + ] + ], + "dna_sequence": "ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCTGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA", + "dna_sequence_length": 1092, + "functions": [ + "sensory histidine kinase in two-component regulatory system with BasR" + ], + "id": "CDS_4030", + "location": [ + [ + "NC_000913", + 4333272, + "-", + 1092 + ] + ], + "md5": "489353f4aa51672d4f87feabd3fec201", + "parent_gene": "", + "protein_md5": "a79228ff04d66645288f6d0b0e985501", + "protein_translation": "MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQYVANQI", + "protein_translation_length": 363, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013466" + ], + [ + "gene_synonym", + "ECK4106" + ], + [ + "gene_synonym", + "EcoGene:EG11615" + ], + [ + "gene_synonym", + "GI:16131939" + ], + [ + "gene_synonym", + "GeneID:948631" + ], + [ + "gene_synonym", + "JW4074" + ], + [ + "gene_synonym", + "NP_418537.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30843" + ], + [ + "gene_synonym", + "b4113" + ], + [ + "gene_synonym", + "basR" + ], + [ + "gene_synonym", + "pmrA" + ] + ], + "dna_sequence": "ATGAAAATTCTGATTGTTGAAGACGATACGCTGTTATTGCAGGGACTGATTCTGGCGGCGCAAACCGAAGGCTACGCGTGCGATAGCGTGACAACCGCGCGGATGGCGGAACAAAGCCTTGAGGCAGGTCATTACAGCCTGGTGGTACTGGATTTAGGGTTACCCGACGAAGATGGACTGCATTTTCTCGCCCGTATCCGGCAGAAAAAATATACCCTGCCGGTACTGATCCTCACCGCTCGCGATACGCTGACCGACAAAATCGCCGGGCTGGATGTCGGTGCCGACGACTATCTGGTGAAGCCTTTTGCGCTGGAAGAGTTACATGCCCGTATCCGCGCCCTGCTACGACGCCATAATAATCAGGGCGAAAGTGAGCTGATTGTTGGCAATCTGACGCTGAACATGGGTCGCCGTCAGGTATGGATGGGCGGTGAAGAGTTGATTCTGACGCCCAAAGAATATGCTCTGCTGTCACGGTTAATGCTCAAAGCAGGCAGTCCGGTGCATCGGGAAATTCTCTACAACGACATCTATAACTGGGACAATGAACCCTCGACCAACACCCTGGAAGTGCATATCCACAATCTGCGCGACAAAGTGGGCAAAGCCCGTATCCGCACCGTGCGCGGCTTTGGCTATATGCTGGTCGCGAATGAGGAAAACTAA", + "dna_sequence_length": 669, + "functions": [ + "response regulator in two-component regulatory system with BasS" + ], + "id": "CDS_4031", + "location": [ + [ + "NC_000913", + 4333950, + "-", + 669 + ] + ], + "md5": "6bc7a4351677febb4b6a7daabdea0651", + "parent_gene": "", + "protein_md5": "9441bd7ea55e37757b26c3f6a77f073c", + "protein_translation": "MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013469" + ], + [ + "gene_synonym", + "ECK4107" + ], + [ + "gene_synonym", + "EcoGene:EG11613" + ], + [ + "gene_synonym", + "GI:90111688" + ], + [ + "gene_synonym", + "GeneID:948629" + ], + [ + "gene_synonym", + "JW5730" + ], + [ + "gene_synonym", + "NP_418538.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30845" + ], + [ + "gene_synonym", + "b4114" + ], + [ + "gene_synonym", + "eptA" + ], + [ + "gene_synonym", + "pagB" + ], + [ + "gene_synonym", + "pmrC" + ], + [ + "gene_synonym", + "yjdB" + ] + ], + "dna_sequence": "ATGTTGAAGCGCCTACTAAAAAGACCCTCTTTGAATTTACTCGCCTGGCTATTGTTGGCCGCTTTTTATATCTCTATCTGCCTGAATATTGCCTTTTTTAAACAGGTGTTGCAGGCGCTGCCGCTGGATTCGCTGCATAACGTACTGGTTTTCTTGTCGATGCCGGTCGTCGCTTTCAGCGTGATTAATATTGTCCTGACACTAAGCTCTTTCTTATGGCTTAATCGACCACTGGCCTGCCTGTTTATTCTGGTTGGCGCGGCTGCACAATATTTCATAATGACTTACGGCATCGTCATCGACCGCTCGATGATTGCCAATATTATTGATACCACTCCGGCAGAAAGTTATGCGCTGATGACACCGCAAATGTTATTAACGCTGGGATTCAGCGGCGTGCTTGCTGCGCTGATTGCCTGCTGGATAAAAATCAAACCTGCCACCTCGCGTCTGCGCAGTGTTCTTTTCCGTGGAGCCAATATTCTGGTTTCTGTACTACTGATTTTGCTGGTCGCCGCACTGTTTTATAAAGACTACGCCTCGTTGTTCCGCAATAACAAAGAGCTGGTGAAATCCTTAAGCCCCTCTAACAGCATTGTTGCCAGCTGGTCATGGTACTCCCATCAGCGACTGGCAAATCTGCCGCTGGTGCGAATTGGTGAAGACGCGCACCGCAACCCGTTAATGCAGAACGAAAAACGTAAAAATTTGACCATCCTGATTGTCGGCGAAACCTCGCGGGCGGAGAACTTCTCCCTCAACGGCTACCCGCGTGAAACTAACCCGCGGCTGGCGAAAGATAACGTGGTCTATTTCCCTAATACCGCATCTTGCGGCACGGCAACGGCAGTTTCAGTACCGTGCATGTTCTCGGATATGCCGCGTGAGCACTACAAAGAAGAGCTGGCACAGCACCAGGAAGGCGTGCTGGATATCATTCAGCGAGCGGGCATCAACGTGCTGTGGAATGACAACGATGGCGGCTGTAAAGGTGCCTGCGACCGCGTGCCTCACCAGAACGTCACCGCGCTGAATCTACCTGATCAGTGCATCAACGGCGAATGCTATGACGAAGTGCTGTTCCACGGGCTTGAAGAGTACATCAATAACCTGCAAGGTGATGGCGTGATTGTCTTACACACCATCGGCAGCCACGGTCCGACCTATTACAACCGCTATCCGCCTCAGTTCAGGAAATTTACCCCAACCTGCGACACCAATGAGATCCAGACCTGTACCAAAGAGCAACTGGTGAACACTTACGACAACACGCTGGTTTACGTCGACTATATTGTTGATAAAGCGATTAATCTGCTGAAAGAACATCAGGATAAATTTACCACCAGCCTGGTTTATCTTTCTGACCACGGTGAATCGTTAGGTGAAAATGGCATCTATCTGCACGGTCTGCCTTATGCCATCGCCCCGGATAGCCAAAAACAGGTGCCGATGCTGCTGTGGCTGTCGGAGGATTATCAAAAACGGTATCAGGTTGACCAGAACTGCCTGCAAAAACAGGCGCAAACGCAACACTATTCACAAGACAATTTATTCTCCACGCTATTGGGATTAACTGGCGTTGAGACGAAGTATTACCAGGCTGCGGATGATATTCTGCAAACTTGCAGGAGAGTGAGTGAATGA", + "dna_sequence_length": 1644, + "functions": [ + "lipid A phosphoethanolamine transferase" + ], + "id": "CDS_4032", + "location": [ + [ + "NC_000913", + 4335590, + "-", + 1644 + ] + ], + "md5": "02eae97c3ab6721d3fb3c1f9bf9f31f8", + "parent_gene": "", + "protein_md5": "feffc6fef72fac3f6a2b4e7b532b4bbb", + "protein_translation": "MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE", + "protein_translation_length": 547, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013473" + ], + [ + "gene_synonym", + "ECK4108" + ], + [ + "gene_synonym", + "EcoGene:EG12462" + ], + [ + "gene_synonym", + "GI:16131941" + ], + [ + "gene_synonym", + "GeneID:948628" + ], + [ + "gene_synonym", + "JW4076" + ], + [ + "gene_synonym", + "NP_418539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60061" + ], + [ + "gene_synonym", + "adiC" + ], + [ + "gene_synonym", + "aniC" + ], + [ + "gene_synonym", + "b4115" + ], + [ + "gene_synonym", + "yjdD" + ], + [ + "gene_synonym", + "yjdE" + ] + ], + "dna_sequence": "ATGTCTTCGGATGCTGATGCTCACAAAGTGGGCTTAATCCCCGTCACCCTGATGGTGTCGGGGAATATTATGGGGTCAGGTGTTTTTCTGTTACCTGCAAACCTGGCCTCTACTGGCGGGATTGCCATTTATGGATGGTTGGTGACGATTATCGGTGCACTGGGGCTCTCGATGGTATACGCCAAAATGTCGTTCCTCGACCCAAGTCCTGGTGGTTCTTACGCTTACGCCCGCCGCTGCTTTGGCCCGTTTCTCGGTTATCAAACCAACGTCCTCTACTGGCTGGCCTGCTGGATCGGCAATATCGCCATGGTGGTCATTGGCGTAGGATATTTAAGTTACTTCTTCCCGATTCTGAAAGATCCATTGGTATTAACCATCACCTGCGTCGTGGTGCTGTGGATCTTCGTCCTGCTGAACATTGTCGGTCCGAAAATGATCACCCGTGTGCAGGCAGTTGCCACCGTGCTGGCGCTGATCCCCATCGTCGGGATTGCCGTATTTGGCTGGTTCTGGTTCCGTGGTGAAACCTATATGGCGGCATGGAACGTCAGCGGCCTGGGCACCTTCGGTGCAATTCAAAGTACCCTTAACGTTACGCTGTGGTCGTTCATCGGTGTGGAAAGTGCCTCCGTTGCCGCAGGTGTGGTGAAAAACCCGAAACGCAATGTCCCTATCGCCACCATTGGTGGGGTATTGATTGCCGCCGTTTGCTATGTACTTTCTACCACCGCGATTATGGGGATGATCCCTAATGCCGCACTGCGCGTTTCTGCTTCGCCATTCGGTGATGCCGCACGGATGGCGTTGGGTGACACCGCCGGGGCCATTGTTTCCTTCTGCGCAGCTGCGGGTTGCTTAGGTTCACTGGGCGGCTGGACGTTGCTGGCGGGTCAAACGGCGAAAGCCGCTGCCGATGACGGACTGTTCCCACCGATTTTTGCCCGTGTAAATAAAGCGGGTACGCCAGTGGCGGGGCTGATTATCGTCGGTATTTTGATGACCATCTTCCAGCTCAGCAGCATTTCACCAAACGCGACCAAAGAGTTCGGTCTGGTTTCTTCCGTCTCGGTCATCTTTACACTGGTGCCATATCTTTACACCTGTGCGGCGTTACTGCTGCTCGGACACGGTCACTTTGGTAAAGCACGCCCGGCATATCTGGCAGTTACTACCATTGCCTTCCTCTACTGCATCTGGGCCGTGGTGGGGTCCGGAGCGAAAGAGGTTATGTGGTCATTTGTCACCCTGATGGTCATCACCGCCATGTATGCGCTGAATTACAACCGGCTACATAAAAACCCGTATCCCTTAGATGCACCAATAAGCAAAGATTAA", + "dna_sequence_length": 1338, + "functions": [ + "arginine:agmatine antiporter" + ], + "id": "CDS_4033", + "location": [ + [ + "NC_000913", + 4337031, + "-", + 1338 + ] + ], + "md5": "eb2e1f929aece525ec5d2fc099d71794", + "parent_gene": "", + "protein_md5": "6da51f605a6d8b0aed027998b72f6c2f", + "protein_translation": "MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013479" + ], + [ + "gene_synonym", + "ECK4109" + ], + [ + "gene_synonym", + "EcoGene:EG11966" + ], + [ + "gene_synonym", + "GI:16131942" + ], + [ + "gene_synonym", + "GeneID:948627" + ], + [ + "gene_synonym", + "JW4077" + ], + [ + "gene_synonym", + "NP_418540.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33234" + ], + [ + "gene_synonym", + "adiY" + ], + [ + "gene_synonym", + "b4116" + ] + ], + "dna_sequence": "ATGAGGATTTGCAGCGACCAACCTTGTATTGTTTTATTGACTGAAAAAGATGTCTGGATAAGGGTGAATGGGAAAGAACCTATTAGCCTTAAAGCTAACCATATGGCGTTATTAAATTGTGAAAATAATATTATCGACGTCTCCTCTCTTAACAACACTTTGGTTGCTCATATTAGTCACGACATCATCAAAGATTACCTCCGGTTTCTGAATAAAGATCTCTCGCAAATACCAGTATGGCAACGTAGCGCTACGCCCATACTCACCCTGCCATGCCTGACGCCAGACGTCTTTCGCGTTGCCGCGCAACACAGCATGATGCCCGCAGAAACTGAGTCAGAAAAGGAACGAACACGCGCATTATTATTCACGGTGCTATCCCGTTTTCTCGACAGTAAAAAATTCGTTTCATTAATGATGTATATGTTACGTAATTGTGTAAGTGACAGCGTTTATCAAATTATTGAAAGCGATATTCACAAAGACTGGAATCTTAGTATGGTAGCCAGTTGTTTATGTCTTAGCCCAAGTCTGTTAAAGAAAAAGTTGAAAAGCGAAAACACCAGTTATAGCCAAATAATCACCACCTGCCGCATGCGTTATGCCGTAAATGAATTAATGATGGACGGTAAAAATATCTCTCAGGTATCACAGTCCTGCGGCTACAACAGTACGTCGTACTTTATTTCTGTCTTTAAAGACTTCTACGGTATGACGCCGCTGCATTATGTTAGTCAGCACAGAGAACGCACTGTCGCCTGA", + "dna_sequence_length": 762, + "functions": [ + "adi system transcriptional activator" + ], + "id": "CDS_4034", + "location": [ + [ + "NC_000913", + 4337929, + "-", + 762 + ] + ], + "md5": "4cb7f154644ecb5df08fa54fffbbec28", + "parent_gene": "", + "protein_md5": "f52ef634ecd02f6a92ea8959834dcae0", + "protein_translation": "MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013483" + ], + [ + "gene_synonym", + "ECK4110" + ], + [ + "gene_synonym", + "EcoGene:EG11501" + ], + [ + "gene_synonym", + "GI:221800782" + ], + [ + "gene_synonym", + "GeneID:948638" + ], + [ + "gene_synonym", + "JW5731" + ], + [ + "gene_synonym", + "NP_418541.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28629" + ], + [ + "gene_synonym", + "adi" + ], + [ + "gene_synonym", + "adiA" + ], + [ + "gene_synonym", + "b4117" + ] + ], + "dna_sequence": "ATGAAAGTATTAATTGTTGAAAGCGAGTTTCTCCATCAAGACACCTGGGTCGGTAACGCCGTTGAGCGTCTGGCAGATGCTTTAAGCCAGCAAAATGTTACCGTGATTAAATCCACCTCCTTTGATGATGGTTTTGCCATTCTCTCTTCAAACGAAGCCATTGACTGCCTGATGTTCAGCTATCAAATGGAACATCCGGACGAACATCAAAACGTCAGACAATTGATCGGTAAGCTTCATGAGCGCCAACAAAACGTGCCGGTCTTCCTGTTGGGCGATCGGGAAAAAGCCCTCGCCGCAATGGATCGCGACCTGCTGGAGCTTGTCGATGAATTCGCCTGGATTCTGGAAGATACCGCCGACTTTATCGCCGGACGCGCCGTTGCCGCGATGACCCGCTACCGCCAGCAGCTGTTGCCGCCACTGTTCAGCGCGCTGATGAAATATAGTGACATCCATGAATATTCCTGGGCAGCGCCAGGCCACCAGGGCGGCGTTGGTTTTACCAAAACACCCGCCGGACGTTTCTACCATGACTACTATGGTGAAAATCTGTTCCGCACCGACATGGGCATCGAACGAACTTCCCTCGGTTCTTTGCTTGACCATACTGGCGCATTTGGCGAAAGCGAAAAATATGCCGCACGCGTATTTGGTGCCGATCGCTCCTGGTCGGTAGTCGTCGGTACTTCCGGCTCTAACCGCACCATCATGCAGGCTTGCATGACCGATAACGATGTCGTGGTCGTTGACCGTAACTGCCATAAATCCATCGAACAAGGTTTGATGCTGACAGGCGCGAAACCGGTCTATATGGTGCCAAGCCGCAACCGCTACGGCATTATCGGGCCAATCTATCCGCAGGAAATGCAACCTGAAACCTTGCAGAAGAAAATCAGTGAAAGCCCGCTGACCAAAGACAAAGCCGGGCAAAAACCGTCTTACTGCGTGGTGACCAACTGCACCTATGACGGCGTGTGTTATAACGCTAAAGAAGCGCAGGATCTGCTGGAAAAAACCTCCGATCGTCTGCACTTTGACGAAGCCTGGTACGGCTATGCACGTTTCAACCCGATCTATGCCGATCACTATGCCATGCGCGGCGAACCTGGCGATCACAACGGTCCTACCGTTTTCGCCACCCACTCCACCCACAAACTGCTGAATGCGCTGTCACAGGCTTCTTATATTCATGTACGTGAAGGTCGTGGGGCGATTAACTTCTCCCGCTTCAACCAGGCCTACATGATGCATGCCACCACCTCCCCGCTGTATGCCATCTGCGCATCCAACGACGTGGCGGTGTCGATGATGGACGGCAACAGCGGCCTGTCACTGACACAGGAAGTGATTGACGAAGCGGTTGATTTCCGTCAGGCGATGGCGCGGCTATATAAAGAGTTCACCGCTGACGGTAGCTGGTTCTTCAAACCGTGGAACAAAGAAGTCGTCACCGACCCACAAACCGGCAAAACCTATGACTTTGCTGACGCACCAACCAAACTGCTGACCACCGTTCAGGACTGCTGGGTAATGCATCCGGGCGAAAGCTGGCACGGCTTCAAAGATATTCCGGATAACTGGAGTATGCTCGACCCGATTAAAGTCAGCATCCTTGCTCCGGGAATGGGTGAAGATGGTGAACTGGAAGAAACCGGTGTTCCGGCGGCGCTGGTCACTGCCTGGCTTGGTCGCCACGGCATTGTACCTACCCGCACCACTGACTTCCAAATTATGTTCCTGTTCTCTATGGGCGTAACCCGTGGGAAATGGGGAACTCTGGTTAACACCCTTTGCTCCTTCAAACGCCACTATGACGCCAACACACCGCTGGCGCAGGTGATGCCGGAACTTGTTGAACAATATCCTGACACTTACGCGAACATGGGGATTCACGATCTGGGTGACACCATGTTTGCCTGGCTGAAAGAAAACAACCCTGGCGCACGGTTGAACGAAGCCTATTCCGGCCTGCCGGTGGCGGAAGTCACCCCGCGTGAAGCGTACAACGCGATTGTCGACAACAATGTCGAACTGGTATCCATTGAAAATCTGCCAGGACGCATCGCGGCAAACTCAGTTATCCCGTATCCGCCAGGAATCCCGATGCTGCTGTCTGGTGAAAACTTCGGCGATAAAAACAGTCCGCAAGTAAGTTATTTACGCTCGCTGCAATCCTGGGACCACCATTTCCCTGGATTTGAACACGAAACTGAAGGGACTGAAATTATTGACGGTATTTACCACGTTATGTGCGTGAAAGCGTAA", + "dna_sequence_length": 2268, + "functions": [ + "arginine decarboxylase" + ], + "id": "CDS_4035", + "location": [ + [ + "NC_000913", + 4340521, + "-", + 2268 + ] + ], + "md5": "e1eb037cf787a65fc290bda6c0b91438", + "parent_gene": "", + "protein_md5": "5532cc3e59d5358b85462ce4b04f665f", + "protein_translation": "MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA", + "protein_translation_length": 755, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013486" + ], + [ + "gene_synonym", + "ECK4111" + ], + [ + "gene_synonym", + "EcoGene:EG11230" + ], + [ + "gene_synonym", + "GI:16131944" + ], + [ + "gene_synonym", + "GeneID:948637" + ], + [ + "gene_synonym", + "JW4079" + ], + [ + "gene_synonym", + "NP_418542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACH8" + ], + [ + "gene_synonym", + "b4118" + ], + [ + "gene_synonym", + "melR" + ] + ], + "dna_sequence": "ATGAATACAGATACGTTTATGTGCAGCAGCGACGAAAAACAGACCCGCAGCCCGCTGTCGCTGTATTCGGAATACCAGCGGATGGAGATTGAGTTTCGCGCACCGCATATCATGCCCACCAGCCACTGGCATGGTCAGGTCGAAGTGAATGTGCCTTTCGATGGCGATGTGGAATACCTGATCAACAATGAAAAAGTGAATATCAATCAGGGTCATATCACGCTGTTCTGGGCCTGTACACCGCACCAACTAACAGATACCGGAACCTGTCAGAGCATGGCGATTTTTAATCTGCCGATGCATCTGTTTCTCTCCTGGCCGCTGGATAAAGACCTGATTAACCACGTCACTCACGGCATGGTGATCAAATCACTGGCCACACAGCAACTTAGCCCGTTTGAAGTGCGCCGCTGGCAGCAGGAATTAAACAGTCCGAACGAGCAAATTCGCCAGCTCGCCATTGATGAAATTGGCCTGATGCTCAAGCGATTTAGCCTCTCTGGCTGGGAACCGATTCTGGTCAATAAAACCTCGCGCACACACAAAAACAGCGTCTCGCGCCATGCGCAATTTTATGTTAGCCAGATGCTGGGCTTTATTGCCGAAAACTATGATCAGGCGCTGACCATCAACGATGTGGCTGAGCACGTCAAACTTAACGCCAACTATGCAATGGGGATATTCCAGCGGGTCATGCAATTGACGATGAAACAGTACATTACCGCGATGCGCATCAACCACGTTCGCGCGTTACTGAGCGATACCGATAAAAGTATTCTCGATATTGCCCTGACGGCAGGCTTTCGTTCAAGTAGTCGTTTTTACAGCACGTTCGGCAAATATGTCGGCATGTCGCCGCAACAATACCGCAAACTTAGCCAACAGCGCCGCCAGACGTTTCCCGGCTAA", + "dna_sequence_length": 909, + "functions": [ + "melibiose operon transcriptional regulator", + "autoregulator" + ], + "id": "CDS_4036", + "location": [ + [ + "NC_000913", + 4341628, + "-", + 909 + ] + ], + "md5": "41b1eba3728d373b2fbd4faf67114853", + "parent_gene": "", + "protein_md5": "0544ae6ac6e7dd6ca5dc2aa8872eecc9", + "protein_translation": "MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013493" + ], + [ + "gene_synonym", + "ECK4112" + ], + [ + "gene_synonym", + "EcoGene:EG10577" + ], + [ + "gene_synonym", + "GI:16131945" + ], + [ + "gene_synonym", + "GeneID:948636" + ], + [ + "gene_synonym", + "JW4080" + ], + [ + "gene_synonym", + "NP_418543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06720" + ], + [ + "gene_synonym", + "b4119" + ], + [ + "gene_synonym", + "mel-7" + ], + [ + "gene_synonym", + "melA" + ] + ], + "dna_sequence": "ATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTCGACGATTTTCGTTAAAAATATTCTTGGTGATGTGTTCCATCGCGAGGCGCTGAAAACGGCGCATATTGCCCTGATGGACATTGACCCCACCCGCCTGGAAGAGTCGCATATTGTGGTGCGTAAGCTGATGGATTCAGCAGGGGCCAGCGGCAAAATCACCTGCCACACCCAACAGAAAGAAGCCTTAGAGGATGCCGATTTTGTCGTGGTGGCATTTCAGATTGGCGGTTATGAACCTTGCACGGTGACTGATTTCGAGGTCTGTAAGCGGCATGGTCTGGAACAAACCATTGCCGATACGTTGGGGCCGGGCGGTATTATGCGCGCGCTACGTACCATTCCGCATCTGTGGCAAATTTGCGAGGACATGACGGAAGTCTGCCCCGATGCCACCATGCTCAACTATGTTAACCCAATGGCGATGAATACCTGGGCGATGTATGCCCGCTATCCGCATATCAAACAGGTCGGGCTGTGCCATTCGGTGCAGGGAACGGCGGAAGAGTTGGCGCGTGACCTCAATATCGACCCAGCTACGCTGCGTTACCGTTGCGCAGGTATCAACCATATGGCGTTTTACCTGGAGCTGGAGCGCAAAACCGCCGACGGCAGTTATGTGAATCTCTACCCGGAACTGCTGGCGGCTTATGAAGCAGGGCAGGCACCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTACACACCGTGGTTTATTAAGCCAGGTCGTGAGGATTTGATTGAGCGTTATAAAGTACCGCTGGATGAGTACCCGAAACGCTGCGTCGAGCAGCTGGCGAACTGGCATAAAGAGCTGGAGGAGTATAAAAAAGCCTCCCGGATTGATATTAAACCGTCACGGGAATATGCCAGCACAATCATGAACGCTATCTGGACTGGCGAGCCGAGTGTGATTTACGGCAACGTCCGTAACGATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAA", + "dna_sequence_length": 1356, + "functions": [ + "alpha-galactosidase, NAD(P)-binding" + ], + "id": "CDS_4037", + "location": [ + [ + "NC_000913", + 4341911, + "+", + 1356 + ] + ], + "md5": "7375ffd7dfc349df0375a725d272cf06", + "parent_gene": "", + "protein_md5": "6d505dc174f4ca3d2659b5f22e58656d", + "protein_translation": "MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR", + "protein_translation_length": 451, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013495" + ], + [ + "gene_synonym", + "ECK4113" + ], + [ + "gene_synonym", + "EcoGene:EG10578" + ], + [ + "gene_synonym", + "GI:345452725" + ], + [ + "gene_synonym", + "GeneID:948635" + ], + [ + "gene_synonym", + "JW4081" + ], + [ + "gene_synonym", + "NP_418544.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02921" + ], + [ + "gene_synonym", + "b4120" + ], + [ + "gene_synonym", + "mel-4" + ], + [ + "gene_synonym", + "melB" + ] + ], + "dna_sequence": "ATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGATCGGCATTGTGTATATGTACCTCATGTATTACTACACCGATGTCGTCGGGCTGTCTGTGGGTTTGGTCGGTACTTTGTTTCTGGTGGCGAGGATCTGGGATGCTATTAACGATCCGATTATGGGATGGATTGTAAATGCTACGCGATCGCGATGGGGTAAGTTCAAACCCTGGATCCTGATCGGTACGTTGGCAAACTCTGTAATCTTATTTCTCCTCTTTAGTGCGCATCTGTTTGAAGGTACTACTCAGATTGTCTTTGTTTGCGTGACCTACATCCTCTGGGGCATGACTTACACCATTATGGATATTCCCTTCTGGTCGCTGGTTCCAACCATCACGCTCGATAAACGTGAGCGCGAACAACTGGTTCCTTATCCGCGTTTTTTTGCCAGTCTGGCAGGCTTTGTTACGGCAGGTGTGACGCTACCATTTGTTAATTATGTCGGCGGTGGCGATCGGGGATTTGGCTTTCAGATGTTCACTCTGGTACTGATCGCCTTTTTTATTGTTTCAACCATCATCACTCTGCGCAATGTGCATGAAGTCTTTTCGTCAGACAATCAACCGTCTGCTGAAGGAAGCCATCTGACACTTAAAGCCATCGTTGCGCTAATTTATAAAAACGATCAGCTTTCATGCCTCTTGGGTATGGCTCTTGCTTATAATGTAGCCAGCAACATTATTACCGGCTTTGCTATCTATTATTTCTCATATGTTATCGGTGATGCGGATTTGTTCCCCTATTATCTGTCGTATGCGGGAGCTGCTAACCTGGTGACGTTAGTATTCTTCCCACGCTTAGTTAAATCATTATCCCGACGCATTTTATGGGCCGGAGCATCTATTCTTCCGGTGTTAAGCTGTGGTGTTCTCCTGTTAATGGCATTAATGAGCTATCACAACGTCGTCCTCATTGTGATTGCGGGTATTTTGCTGAATGTGGGAACGGCGCTTTTCTGGGTATTACAGGTCATCATGGTGGCAGATATCGTTGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAGTCTACGCAAGCCCTATTAGGTATGCAGTTTATTATGATTGCTCTACCAACTCTGTTTTTCATGGTAACGCTGATTCTCTACTTCCGTTTCTATCGCCTCAATGGTGACACGCTGCGCAGGATCCAGATCCATCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGA", + "dna_sequence_length": 1422, + "functions": [ + "melibiose:sodium symporter" + ], + "id": "CDS_4038", + "location": [ + [ + "NC_000913", + 4343369, + "+", + 1422 + ] + ], + "md5": "0d4d61b81a86c42275437e9d32611fc1", + "parent_gene": "", + "protein_md5": "8a43e1986b9cb0617db03e55a681a7a6", + "protein_translation": "MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA", + "protein_translation_length": 473, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013498" + ], + [ + "gene_synonym", + "ECK4114" + ], + [ + "gene_synonym", + "EcoGene:EG12463" + ], + [ + "gene_synonym", + "GI:16131947" + ], + [ + "gene_synonym", + "GeneID:948634" + ], + [ + "gene_synonym", + "JW4082" + ], + [ + "gene_synonym", + "NP_418545.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39270" + ], + [ + "gene_synonym", + "b4121" + ], + [ + "gene_synonym", + "yjdF" + ] + ], + "dna_sequence": "ATGACCCGCACACTCAAGCCGTTAATTCTTAACACCAGCGCACTGACGCTAACGTTAATCCTGATTTATACCGGCATTTCGGCCCATGACAAACTCACCTGGCTGATGGAAGTGACACCGGTGATTATTGTCGTGCAGCTACTGCTTGCCACCGCCAGACGTTATCCGTTAACGCCGCTGCTCTATACGCTCATTTTCCTTCACGCCATCATCCTGATGGTCGGCGGACAATACACCTACGCGAAAGTCCCCGTTGGTTTTGAGGTGCAGGAATGGCTGGGGTTGAGTCGTAATCCGTATGACAAGCTGGGGCACTTTTTCCAGGGGCTGGTGCCTGCACTGGTGGCACGAGAAATTCTCGTTCGCGGGATGTACGTGCGCGGACGTAAAATGGTGGCGTTCCTGGTCTGCTGCGTGGCGCTGGCGATAAGCGCGATGTATGAATTAATCGAGTGGTGGGCAGCGCTGGCAATGGGTCAGGGAGCGGATGATTTTCTCGGCACCCAGGGCGACCAGTGGGACACGCAATCCGATATGTTCTGCGCGCTGCTTGGCGCATTAACGACGGTGATATTCCTCGCTCGCTTTCATTGCCGCCAGCTACGGCGCTTTGGCTTGATAACCGGATAA", + "dna_sequence_length": 630, + "functions": [ + "DUF2238 family inner membrane protein" + ], + "id": "CDS_4039", + "location": [ + [ + "NC_000913", + 4345558, + "-", + 630 + ] + ], + "md5": "fa5b39d8a28c46db78e4f21aa2426aee", + "parent_gene": "", + "protein_md5": "06bd095844d1521af83312ef0cd60b98", + "protein_translation": "MTRTLKPLILNTSALTLTLILIYTGISAHDKLTWLMEVTPVIIVVQLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQGADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013501" + ], + [ + "gene_synonym", + "ECK4115" + ], + [ + "gene_synonym", + "EcoGene:EG10357" + ], + [ + "gene_synonym", + "GI:16131948" + ], + [ + "gene_synonym", + "GeneID:948642" + ], + [ + "gene_synonym", + "JW4083" + ], + [ + "gene_synonym", + "NP_418546.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14407" + ], + [ + "gene_synonym", + "b4122" + ], + [ + "gene_synonym", + "fumB" + ] + ], + "dna_sequence": "ATGTCAAACAAACCCTTTATCTACCAGGCACCTTTCCCGATGGGGAAAGACAATACCGAATACTATCTACTCACTTCCGATTACGTTAGCGTTGCCGACTTCGACGGCGAAACCATCCTGAAAGTGGAACCAGAAGCCCTGACCCTGCTGGCGCAGCAAGCCTTTCACGACGCTTCTTTTATGCTCCGCCCGGCACACCAGAAACAGGTTGCGGCTATTCTTCACGATCCAGAAGCCAGCGAAAACGACAAGTACGTGGCGCTGCAATTCTTAAGAAACTCCGAAATCGCCGCCAAAGGCGTGCTGCCGACCTGCCAGGATACCGGCACCGCGATCATCGTCGGTAAAAAAGGCCAGCGCGTGTGGACCGGCGGCGGTGATGAAGAAACGCTGTCGAAAGGCGTCTATAACACCTATATCGAAGATAACCTGCGCTATTCACAGAATGCGGCGCTGGACATGTACAAAGAGGTCAACACCGGCACTAACCTGCCTGCGCAAATCGACCTGTACGCGGTAGATGGCGATGAGTACAAATTCCTTTGCGTTGCGAAAGGCGGCGGCTCTGCCAACAAAACGTATCTCTACCAGGAAACCAAAGCCCTGCTGACTCCCGGCAAACTGAAAAACTTCCTCGTCGAGAAAATGCGTACCCTCGGTACTGCAGCCTGCCCGCCGTACCATATCGCGTTTGTGATTGGCGGTACGTCTGCGGAAACCAACCTGAAAACCGTCAAGTTAGCAAGCGCTCACTATTACGATGAACTGCCGACGGAAGGGAACGAACATGGTCAGGCGTTCCGCGATGTCCAGCTGGAACAGGAACTGCTGGAAGAGGCCCAGAAACTCGGTCTTGGCGCGCAGTTTGGCGGTAAATACTTCGCGCACGACATTCGCGTTATCCGTCTGCCACGTCACGGCGCATCCTGCCCGGTCGGCATGGGCGTCTCCTGCTCCGCTGACCGTAACATTAAAGCGAAAATCAACCGCGAAGGTATCTGGATCGAAAAACTGGAACACAACCCAGGCCAGTACATTCCACAAGAACTGCGCCAGGCCGGTGAAGGCGAAGCGGTGAAAGTTGACCTTAACCGCCCGATGAAAGAGATCCTCGCCCAGCTTTCGCAATACCCGGTATCCACTCGTTTGTCGCTCACCGGCACCATTATCGTGGGCCGAGATATTGCACACGCCAAGCTGAAAGAGCTGATTGACGCCGGTAAAGAACTTCCGCAGTACATCAAAGATCACCCGATCTACTACGCGGGTCCGGCGAAAACCCCTGCCGGTTATCCATCAGGTTCACTTGGCCCAACCACCGCAGGCCGTATGGACTCCTACGTGGATCTGCTGCAATCCCACGGCGGCAGCATGATCATGCTGGCGAAAGGTAACCGCAGTCAGCAGGTTACCGACGCGTGTCATAAACACGGCGGCTTCTACCTCGGTAGCATCGGCGGTCCGGCGGCGGTACTGGCGCAGCAGAGCATCAAGCATCTGGAGTGCGTCGCTTATCCGGAGCTGGGTATGGAAGCTATCTGGAAAATCGAAGTAGAAGATTTCCCGGCGTTTATCCTGGTCGATGACAAAGGTAACGACTTCTTCCAGCAAATCGTCAACAAACAGTGCGCGAACTGCACTAAGTAA", + "dna_sequence_length": 1647, + "functions": [ + "anaerobic class I fumarate hydratase (fumarase B)" + ], + "id": "CDS_4040", + "location": [ + [ + "NC_000913", + 4347326, + "-", + 1647 + ] + ], + "md5": "b9ebfabef31cfb164ef77a24edf298bc", + "parent_gene": "", + "protein_md5": "3ae4d43505c990161419f906e48968a9", + "protein_translation": "MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQRVWTGGGDEETLSKGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013503" + ], + [ + "gene_synonym", + "ECK4116" + ], + [ + "gene_synonym", + "EcoGene:EG10006" + ], + [ + "gene_synonym", + "GI:16131949" + ], + [ + "gene_synonym", + "GeneID:948641" + ], + [ + "gene_synonym", + "JW4084" + ], + [ + "gene_synonym", + "NP_418547.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABN9" + ], + [ + "gene_synonym", + "b4123" + ], + [ + "gene_synonym", + "dcuB" + ], + [ + "gene_synonym", + "genF" + ] + ], + "dna_sequence": "ATGTTATTTACTATCCAACTTATCATAATACTGATATGTCTGTTTTATGGTGCCAGAAAGGGTGGTATCGCGCTGGGTTTATTAGGCGGTATCGGTCTGGTCATTCTGGTCTTCGTCTTCCACCTTCAGCCAGGTAAACCACCAGTTGATGTCATGCTGGTTATCATTGCGGTGGTGGCGGCATCGGCGACCTTGCAAGCTTCGGGCGGTCTTGATGTCATGCTGCAAATTGCCGAGAAGCTGCTGCGCCGCAACCCGAAATATGTCTCAATTGTCGCGCCGTTTGTGACCTGTACACTGACCATTCTTTGCGGTACGGGTCATGTGGTTTACACCATTCTGCCGATCATCTACGACGTCGCCATTAAGAACAACATCCGTCCGGAACGTCCGATGGCGGCAAGTTCTATCGGTGCACAGATGGGGATTATCGCCAGTCCGGTGTCGGTTGCGGTCGTGTCTCTGGTTGCGATGCTGGGTAATGTCACCTTTGATGGTCGCCATCTTGAGTTCCTCGATCTGCTGGCAATCACCATTCCATCGACGTTAATCGGTATCCTGGCGATCGGTATCTTCAGCTGGTTCCGCGGTAAAGATCTGGATAAAGACGAAGAGTTCCAGAAATTCATCTCCGTACCGGAAAACCGTGAGTATGTTTACGGTGATACCGCGACGCTGCTGGATAAAAAACTGCCGAAAAGCAACTGGCTGGCAATGTGGATTTTCCTCGGGGCAATCGCTGTAGTCGCCCTTCTTGGTGCTGATTCGGACCTGCGTCCATCCTTCGGCGGCAAACCGCTGTCGATGGTACTGGTTATTCAGATGTTTATGCTGCTGACCGGGGCGCTGATTATTATCCTGACCAAAACCAATCCCGCGTCTATCTCAAAAAACGAAGTCTTCCGTTCCGGTATGATCGCCATCGTGGCGGTGTACGGTATCGCATGGATGGCAGAAACCATGTTCGGTGCGCATATGTCTGAAATTCAGGGCGTACTGGGTGAAATGGTGAAAGAGTATCCGTGGGCCTATGCCATTGTTCTGCTGCTGGTTTCCAAGTTTGTAAACTCTCAGGCTGCGGCGCTGGCGGCGATTGTTCCGGTCGCGCTGGCGATCGGCGTTGATCCGGCATACATCGTGGCTTCAGCACCGGCTTGCTACGGTTATTACATCCTGCCGACTTATCCGAGCGATCTGGCAGCGATTCAGTTTGACCGTTCCGGCACCACCCACATCGGTCGCTTCGTCATCAACCACAGCTTTATTCTGCCGGGGTTGATTGGTGTGAGCGTATCGTGCGTCTTCGGCTGGATCTTCGCCGCGATGTACGGGTTCTTATAA", + "dna_sequence_length": 1341, + "functions": [ + "C4-dicarboxylate transporter, anaerobic", + "DcuS co-sensor" + ], + "id": "CDS_4041", + "location": [ + [ + "NC_000913", + 4348744, + "-", + 1341 + ] + ], + "md5": "0f2e2c772c748e792636409c4feb9e5b", + "parent_gene": "", + "protein_md5": "7d1a88b095b80496a6d16a9d46c36d98", + "protein_translation": "MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL", + "protein_translation_length": 446, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013507" + ], + [ + "gene_synonym", + "ECK4117" + ], + [ + "gene_synonym", + "EcoGene:EG12464" + ], + [ + "gene_synonym", + "GI:16131950" + ], + [ + "gene_synonym", + "GeneID:948640" + ], + [ + "gene_synonym", + "JW4085" + ], + [ + "gene_synonym", + "NP_418548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD01" + ], + [ + "gene_synonym", + "b4124" + ], + [ + "gene_synonym", + "dcuR" + ], + [ + "gene_synonym", + "yjdG" + ] + ], + "dna_sequence": "ATGATCAATGTATTAATTATCGATGACGACGCAATGGTCGCGGAGCTGAATCGCCGATACGTAGCACAAATCCCAGGCTTTCAATGCTGTGGAACAGCCTCGACGCTGGAGAAAGCCAAAGAGATTATCTTCAATAGCGATACGCCTATCGACCTGATATTGCTCGATATCTATATGCAAAAAGAGAACGGGCTCGATTTACTGCCTGTCCTGCATAACGCGCGTTGCAAAAGTGATGTGATTGTCATCTCCTCCGCAGCCGATGCGGCAACCATTAAAGATTCGCTGCATTACGGTGTCGTGGATTACCTGATCAAACCCTTCCAGGCTTCCCGCTTTGAAGAGGCGCTCACCGGCTGGCGGCAAAAGAAAATGGCGCTGGAAAAACATCAGTATTATGACCAGGCCGAGCTTGATCAGCTAATCCACGGCAGCAGCTCCAACGAACAGGATCCTCGTCGCTTGCCAAAAGGCTTAACGCCGCAGACGTTACGCACACTGTGCCAGTGGATTGACGCGCATCAGGACTATGAATTTTCAACCGACGAGCTAGCCAACGAGGTTAACATTTCGCGTGTTTCCTGCCGTAAATACCTCATCTGGCTGGTCAACTGCCACATCTTGTTCACCAGTATCCATTATGGCGTCACGGGGCGTCCAGTTTACCGTTACCGTATTCAGGCAGAACACTACTCACTACTGAAACAATATTGCCAATAA", + "dna_sequence_length": 720, + "functions": [ + "response regulator in two-component regulatory system with DcuS" + ], + "id": "CDS_4042", + "location": [ + [ + "NC_000913", + 4350034, + "-", + 720 + ] + ], + "md5": "a85a1bdc2bfd289ea34d28c1707902d5", + "parent_gene": "", + "protein_md5": "62bbf7dad703c9502be42d1679853d2e", + "protein_translation": "MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013509" + ], + [ + "gene_synonym", + "ECK4118" + ], + [ + "gene_synonym", + "EcoGene:EG12465" + ], + [ + "gene_synonym", + "GI:16131951" + ], + [ + "gene_synonym", + "GeneID:948639" + ], + [ + "gene_synonym", + "JW4086" + ], + [ + "gene_synonym", + "NP_418549.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC8" + ], + [ + "gene_synonym", + "b4125" + ], + [ + "gene_synonym", + "dcuS" + ], + [ + "gene_synonym", + "yjdH" + ] + ], + "dna_sequence": "ATGAGACATTCATTGCCCTACCGCATGTTACGCAAACGTCCGATGAAATTGAGTACCACAGTGATCTTAATGGTCAGTGCGGTACTGTTCTCGGTGCTATTGGTGGTGCATCTGATTTACTTCTCGCAAATCAGTGATATGACGCGAGATGGGCTAGCCAACAAGGCACTGGCAGTGGCGCGTACCCTCGCCGACTCGCCGGAAATCCGTCAGGGCTTGCAGAAAAAACCGCAGGAGAGTGGCATCCAGGCCATCGCGGAAGCCGTACGCAAACGCAACGATCTGCTGTTTATTGTCGTTACCGATATGCAAAGTCTTCGCTACTCGCATCCTGAAGCCCAGCGTATTGGTCAGCCATTTAAAGGTGATGACATCCTTAAAGCGCTGAATGGCGAAGAAAATGTCGCTATCAATCGCGGTTTTCTGGCGCAGGCTTTACGCGTATTTACCCCCATCTACGATGAAAATCATAAACAAATTGGCGTGGTGGCGATCGGCCTTGAGTTAAGCCGTGTGACCCAACAGATCAATGACAGTCGCTGGAGCATTATCTGGTCGGTATTATTTGGCATGCTGGTCGGACTGATTGGCACCTGCATTCTGGTTAAGGTACTGAAAAAAATCCTTTTCGGCCTGGAACCCTACGAAATCTCCACGCTGTTTGAGCAACGCCAGGCCATGTTGCAGTCTATCAAAGAAGGCGTCGTTGCCGTGGACGATCGCGGCGAGGTCACGCTGATCAACGATGCCGCACAAGAATTGCTGAATTACCGTAAGTCGCAGGACGATGAGAAACTGTCGACGCTAAGCCACTCATGGTCACAGGTGGTAGATGTCTCGGAAGTGTTACGCGACGGTACCCCGCGCCGCGACGAAGAGATTACGATTAAAGACCGGCTATTACTGATCAACACCGTTCCGGTGCGCAGTAATGGCGTTATCATCGGTGCCATTTCAACCTTCAGGGACAAAACTGAAGTACGTAAACTGATGCAGCGACTCGACGGTCTGGTCAACTATGCTGACGCACTTCGTGAACGATCCCACGAATTTATGAATAAATTGCATGTGATTCTCGGATTATTGCATCTGAAGAGTTATAAGCAGTTGGAAGATTACATTCTCAAAACAGCCAATAACTATCAGGAAGAGATTGGCTCTCTGCTGGGTAAGATCAAATCTCCGGTTATCGCTGGTTTTTTAATCAGCAAGATTAACCGCGCGACCGATTTAGGCCATACGCTGATTTTAAACAGTGAAAGCCAGCTGCCAGACAGCGGCAGTGAGGACCAGGTCGCGACGCTGATTACCACGTTGGGAAATCTGATAGAAAACGCGCTGGAGGCATTAGGGCCGGAACCCGGAGGCGAAATTAGCGTAACATTGCACTACCGTCACGGCTGGCTGCACTGTGAAGTTAATGATGATGGACCGGGGATCGCACCCGATAAAATCGATCACATTTTTGACAAAGGTGTCTCGACAAAAGGAAGCGAGCGAGGCGTCGGTTTAGCACTTGTCAAACAACAGGTAGAAAATCTCGGCGGCAGCATCGCCGTGGAATCGGAACCCGGGATTTTCACACAATTTTTTGTCCAGATACCCTGGGACGGGGAGAGGTCGAACAGATGA", + "dna_sequence_length": 1632, + "functions": [ + "sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration" + ], + "id": "CDS_4043", + "location": [ + [ + "NC_000913", + 4351662, + "-", + 1632 + ] + ], + "md5": "eab024d14d16fda5c5c0206c0777fe15", + "parent_gene": "", + "protein_md5": "13a046f26bd163bd6fcd8918b2626f8a", + "protein_translation": "MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPFKGDDILKALNGEENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR", + "protein_translation_length": 543, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013513" + ], + [ + "gene_synonym", + "ECK4119" + ], + [ + "gene_synonym", + "EcoGene:EG12466" + ], + [ + "gene_synonym", + "GI:16131952" + ], + [ + "gene_synonym", + "GeneID:948648" + ], + [ + "gene_synonym", + "JW4087" + ], + [ + "gene_synonym", + "NP_418550.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF59" + ], + [ + "gene_synonym", + "b4126" + ], + [ + "gene_synonym", + "yjdI" + ] + ], + "dna_sequence": "ATGGATCAGGCGCTACTGGACGGGGGTTATCGCTGTTATACCGGCGAAAAGATCGATGTCTATTTCAACACTGCGATATGTCAGCATTCTGGCAATTGCGTACGTGGCAACGGCAAGTTATTTAATCTCAAACGAAAGCCGTGGATCATGCCGGATGAAGTCGACGTCGCCACTGTGGTTAAAGTGATTGATACGTGCCCGAGCGGCGCGCTGAAATACCGTCATAAATAA", + "dna_sequence_length": 231, + "functions": [ + "putative 4Fe-4S mono-cluster protein" + ], + "id": "CDS_4044", + "location": [ + [ + "NC_000913", + 4351843, + "+", + 231 + ] + ], + "md5": "1ef88d4c23fe5ec4eff1095251c8da8f", + "parent_gene": "", + "protein_md5": "a4d2334bb8fdfdcffe5daa6acb9eda80", + "protein_translation": "MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013515" + ], + [ + "gene_synonym", + "ECK4120" + ], + [ + "gene_synonym", + "EcoGene:EG12467" + ], + [ + "gene_synonym", + "GI:16131953" + ], + [ + "gene_synonym", + "GeneID:948647" + ], + [ + "gene_synonym", + "JW4088" + ], + [ + "gene_synonym", + "NP_418551.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39274" + ], + [ + "gene_synonym", + "b4127" + ], + [ + "gene_synonym", + "yjdJ" + ] + ], + "dna_sequence": "ATGGAAATACGCGAAGGCCACAATAAATTTTACATTAATGACAAACAAGGCAAGCAAATCGCTGAAATTGTCTTTGTGCCGACCGGAGAGAATTTAGCGATTATCGAACATACCGATGTCGATGAAAGCCTGAAAGGGCAAGGGATTGGTAAACAGCTGGTTGCGAAAGTCGTGGAAAAAATGCGTCGGGAAAAACGAAAAATTATCCCATTATGCCCATTTGCGAAACATGAATTTGATAAAACGCGGGAGTATGATGATATTCGCAGTTGA", + "dna_sequence_length": 273, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_4045", + "location": [ + [ + "NC_000913", + 4352085, + "+", + 273 + ] + ], + "md5": "adcb6507c44b9e9d9aa7d79f3b5833e6", + "parent_gene": "", + "protein_md5": "2b5f1c1b38a8e69a6bcb5dce2d9bf6f2", + "protein_translation": "MEIREGHNKFYINDKQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013518" + ], + [ + "gene_synonym", + "ECK4121" + ], + [ + "gene_synonym", + "EcoGene:EG12468" + ], + [ + "gene_synonym", + "GI:16131954" + ], + [ + "gene_synonym", + "GeneID:948646" + ], + [ + "gene_synonym", + "JW4089" + ], + [ + "gene_synonym", + "NP_418552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF61" + ], + [ + "gene_synonym", + "b4128" + ], + [ + "gene_synonym", + "ghoS" + ], + [ + "gene_synonym", + "yjdK" + ] + ], + "dna_sequence": "ATGGAAGGTAAAAACAAGTTCAATACTTATGTTGTTTCTTTTGATTATCCATCATCTTATTCCTCAGTGTTCTTAAGATTAAGATCATTGATGTATGATATGAATTTCTCCTCTATCGTGGCTGATGAATATGGGATACCACGACAATTGAATGAAAACTCCTTCGCAATAACGACATCGTTAGCCGCAAGTGAAATCGAAGATTTAATCAGGCTCAAATGCTTAGACTTACCGGATATTGATTTTGACCTCAACATTATGACAGTTGATGACTATTTCCGTCAGTTTTACAAGTAG", + "dna_sequence_length": 297, + "functions": [ + "antitoxin of GhoTS toxin-antitoxin pair", + "endonuclease for ghoT mRNA" + ], + "id": "CDS_4046", + "location": [ + [ + "NC_000913", + 4352584, + "+", + 297 + ] + ], + "md5": "ba99ac6dcdf0140a6252382fd9e36070", + "parent_gene": "", + "protein_md5": "f493d69733f522a4c27501a938b03886", + "protein_translation": "MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285080" + ], + [ + "gene_synonym", + "ECK4122" + ], + [ + "gene_synonym", + "EcoGene:EG14342" + ], + [ + "gene_synonym", + "GI:94541131" + ], + [ + "gene_synonym", + "GeneID:1450308" + ], + [ + "gene_synonym", + "JW5732" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64646" + ], + [ + "gene_synonym", + "YP_588474.1" + ], + [ + "gene_synonym", + "b4559" + ], + [ + "gene_synonym", + "ghoT" + ], + [ + "gene_synonym", + "yjdO" + ] + ], + "dna_sequence": "ATGGCACTATTCTCTAAAATATTAATTTTTTATGTGATTGGTGTGAACATATCCTTTGTCATTATCTGGTTTATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAG", + "dna_sequence_length": 174, + "functions": [ + "toxin of GhoTS toxin-antitoxin pair", + "membrane-lytic protein", + "stimulator of persister cell formation" + ], + "id": "CDS_4047", + "location": [ + [ + "NC_000913", + 4352908, + "+", + 174 + ] + ], + "md5": "5efa1f2854097ac027e6d02d6ecf0525", + "parent_gene": "", + "protein_md5": "4ab13bfa7f38d4245489085048fe75b8", + "protein_translation": "MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF", + "protein_translation_length": 57, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013520" + ], + [ + "gene_synonym", + "ECK4123" + ], + [ + "gene_synonym", + "EcoGene:EG10553" + ], + [ + "gene_synonym", + "GI:16131955" + ], + [ + "gene_synonym", + "GeneID:948645" + ], + [ + "gene_synonym", + "JW4090" + ], + [ + "gene_synonym", + "NP_418553.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8N5" + ], + [ + "gene_synonym", + "b4129" + ], + [ + "gene_synonym", + "lysU" + ] + ], + "dna_sequence": "ATGTCTGAACAAGAAACACGGGGAGCCAATGAGGCTATTGATTTTAACGATGAACTGAGAAATCGCCGCGAAAAACTGGCGGCACTACGTCAGCAAGGTGTGGCGTTTCCCAATGATTTTCGCCGCGACCATACCTCTGACCAGTTGCACGAAGAGTTTGATGCGAAGGATAACCAGGAACTGGAATCCTTAAACATTGAAGTCTCGGTTGCTGGCCGAATGATGACCCGTCGTATCATGGGGAAAGCCTCCTTTGTAACGTTGCAGGATGTCGGTGGCCGTATTCAACTGTACGTTGCAAGAGATAGCCTGCCAGAAGGTGTTTATAACGATCAGTTTAAAAAATGGGATCTGGGTGACATTATCGGTGCCCGCGGTACGCTGTTTAAGACGCAAACGGGTGAGCTTTCCATTCACTGTACTGAGCTGCGCCTGCTGACTAAAGCACTACGTCCTTTACCAGATAAATTCCATGGTCTGCAGGATCAGGAAGTCCGTTATCGTCAACGTTATCTGGACCTCATCGCTAACGATAAATCCCGTCAAACGTTTGTTGTCCGTTCAAAAATTCTGGCCGCTATCCGTCAATTCATGGTCGCGCGCGGCTTTATGGAAGTAGAAACCCCGATGATGCAGGTAATTCCAGGTGGGGCATCTGCTCGCCCGTTTATTACCCATCATAATGCTCTGGATTTAGATATGTATCTGCGTATCGCGCCGGAGCTGTATCTGAAACGTCTGGTTGTAGGCGGTTTTGAACGGGTATTCGAAATCAACCGTAACTTCCGTAATGAAGGTATTTCTGTTCGCCATAATCCTGAGTTCACAATGATGGAACTCTACATGGCGTATGCGGATTACCACGATTTGATTGAACTGACAGAGTCACTGTTCCGCACCCTGGCACAAGAGGTTCTGGGTACCACTAAAGTCACTTATGGCGAGCATGTGTTTGATTTCGGCAAACCGTTTGAAAAACTCACCATGCGCGAAGCAATCAAAAAATATCGTCCAGAAACCGATATGGCCGACCTGGATAATTTTGATGCTGCTAAAGCATTAGCTGAATCTATCGGTATTACGGTAGAGAAAAGCTGGGGGTTGGGACGTATTGTCACAGAGATCTTTGATGAAGTGGCAGAAGCACATCTGATTCAGCCAACCTTTATTACGGAATATCCGGCAGAAGTGTCCCCGCTGGCACGCCGTAATGATGTTAACCCGGAAATCACCGACCGTTTTGAATTCTTCATCGGTGGTCGTGAAATCGGTAATGGTTTTAGCGAATTAAACGACGCAGAAGATCAGGCTGAACGTTTCCAGGAACAGGTTAATGCTAAAGCTGCAGGTGACGACGAAGCCATGTTCTATGACGAAGATTACGTGACTGCGCTGGAATATGGTCTGCCGCCAACCGCTGGTCTGGGTATTGGTATCGACCGAATGATTATGCTGTTTACTAACAGCCATACTATTCGCGACGTTATTCTCTTCCCGGCGATGCGCCCACAGAAATAA", + "dna_sequence_length": 1518, + "functions": [ + "lysine tRNA synthetase, inducible" + ], + "id": "CDS_4048", + "location": [ + [ + "NC_000913", + 4354717, + "-", + 1518 + ] + ], + "md5": "bba71bfabd1dc81262bded8bedad51ae", + "parent_gene": "", + "protein_md5": "b245d5fa5d26276e008a2c8c37d3471e", + "protein_translation": "MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK", + "protein_translation_length": 505, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013524" + ], + [ + "gene_synonym", + "ECK4124" + ], + [ + "gene_synonym", + "EcoGene:EG12469" + ], + [ + "gene_synonym", + "GI:16131956" + ], + [ + "gene_synonym", + "GeneID:948644" + ], + [ + "gene_synonym", + "JW4091" + ], + [ + "gene_synonym", + "NP_418554.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39276" + ], + [ + "gene_synonym", + "b4130" + ], + [ + "gene_synonym", + "dtpC" + ], + [ + "gene_synonym", + "yjdL" + ] + ], + "dna_sequence": "ATGAAAACACCCTCACAGCCGCGCGCGATATACTATATCGTGGCGATCCAAATCTGGGAGTACTTCAGTTTTTACGGCATGCGTGCCTTACTCATTCTCTATCTCACCCATCAGCTTGGTTTTGATGATAACCATGCCATCAGCCTGTTCAGCGCATATGCTTCTCTGGTTTACGTTACCCCTATTCTCGGCGGCTGGCTTGCCGACCGCCTGCTCGGCAACCGCACTGCAGTGATTGCCGGCGCGCTGTTAATGACCCTTGGCCATGTGGTGCTGGGTATTGATACAAATTCAACCTTTAGCCTGTATCTGGCGCTGGCAATCATTATTTGTGGCTACGGTTTATTCAAATCAAACATCAGCTGTTTGCTTGGCGAGCTCTACGACGAGAACGATCATCGACGTGATGGCGGTTTTTCGCTGCTGTATGCTGCGGGCAATATCGGTTCTATCGCAGCCCCAATCGCCTGCGGCCTGGCTGCTCAGTGGTATGGATGGCATGTTGGCTTTGCCCTTGCGGGTGGCGGCATGTTTATCGGTTTGTTGATTTTCTTAAGCGGTCATCGTCATTTCCAGTCCACACGTAGTATGGATAAAAAAGCGCTCACTAGTGTCAAATTTGCCTTACCAGTATGGAGCTGGTTAGTGGTGATGCTCTGTTTAGCCCCAGTATTTTTTACTCTGCTGCTGGAGAACGACTGGTCCGGATATTTGCTGGCGATCGTTTGCCTCATTGCCGCACAAATCATTGCCCGCATGATGATCAAATTCCCCGAACATCGCCGTGCTCTTTGGCAAATTGTATTGTTGATGTTTGTCGGGACATTGTTCTGGGTACTGGCACAACAGGGCGGCAGTACCATCAGCTTGTTTATCGATCGCTTTGTGAATCGTCAGGCATTCAATATTGAAGTACCTACAGCACTATTCCAGTCGGTGAATGCAATTGCGGTGATGCTCGCTGGGGTTGTACTGGCCTGGCTGGCGTCGCCAGAAAGCCGCGGCAACTCAACATTGCGCGTCTGGCTGAAGTTTGCCTTTGGCTTACTGCTGATGGCTTGTGGCTTTATGTTGTTGGCATTTGATGCCCGACATGCAGCGGCTGACGGTCAAGCGTCAATGGGCGTGATGATATCCGGGCTGGCGCTAATGGGCTTTGCCGAACTCTTTATTGACCCGGTGGCGATTGCGCAAATCACGCGTCTGAAAATGTCTGGCGTATTAACCGGGATTTATATGCTGGCAACAGGCGCGGTCGCCAACTGGCTGGCAGGCGTCGTGGCACAGCAGACGACAGAGTCGCAAATTAGCGGTATGGCAATTGCAGCTTACCAGCGATTCTTTTCTCAGATGGGAGAGTGGACGTTGGCTTGTGTCGCGATCATCGTCGTATTGGCCTTTGCTACCCGTTTTCTGTTTAGCACGCCGACGAATATGATACAGGAGAGCAACGATTAA", + "dna_sequence_length": 1458, + "functions": [ + "dipeptide and tripeptide permease" + ], + "id": "CDS_4049", + "location": [ + [ + "NC_000913", + 4356411, + "-", + 1458 + ] + ], + "md5": "73c618070059206f0da8d2db25ae4855", + "parent_gene": "", + "protein_md5": "d48a8b724fd6b65b4e3bf3f71553dd2e", + "protein_translation": "MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTPILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNISCLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIGLLIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLENDWSGYLLAIVCLIAAQIIARMMIKFPEHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQAFNIEVPTALFQSVNAIAVMLAGVVLAWLASPESRGNSTLRVWLKFAFGLLLMACGFMLLAFDARHAAADGQASMGVMISGLALMGFAELFIDPVAIAQITRLKMSGVLTGIYMLATGAVANWLAGVVAQQTTESQISGMAIAAYQRFFSQMGEWTLACVAIIVVLAFATRFLFSTPTNMIQESND", + "protein_translation_length": 485, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013526" + ], + [ + "gene_synonym", + "ECK4125" + ], + [ + "gene_synonym", + "EcoGene:EG10131" + ], + [ + "gene_synonym", + "GI:16131957" + ], + [ + "gene_synonym", + "GeneID:948643" + ], + [ + "gene_synonym", + "JW4092" + ], + [ + "gene_synonym", + "NP_418555.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9H3" + ], + [ + "gene_synonym", + "b4131" + ], + [ + "gene_synonym", + "cadA" + ], + [ + "gene_synonym", + "ldcI" + ] + ], + "dna_sequence": "ATGAACGTTATTGCAATATTGAATCACATGGGGGTTTATTTTAAAGAAGAACCCATCCGTGAACTTCATCGCGCGCTTGAACGTCTGAACTTCCAGATTGTTTACCCGAACGACCGTGACGACTTATTAAAACTGATCGAAAACAATGCGCGTCTGTGCGGCGTTATTTTTGACTGGGATAAATATAATCTCGAGCTGTGCGAAGAAATTAGCAAAATGAACGAGAACCTGCCGTTGTACGCGTTCGCTAATACGTATTCCACTCTCGATGTAAGCCTGAATGACCTGCGTTTACAGATTAGCTTCTTTGAATATGCGCTGGGTGCTGCTGAAGATATTGCTAATAAGATCAAGCAGACCACTGACGAATATATCAACACTATTCTGCCTCCGCTGACTAAAGCACTGTTTAAATATGTTCGTGAAGGTAAATATACTTTCTGTACTCCTGGTCACATGGGCGGTACTGCATTCCAGAAAAGCCCGGTAGGTAGCCTGTTCTATGATTTCTTTGGTCCGAATACCATGAAATCTGATATTTCCATTTCAGTATCTGAACTGGGTTCTCTGCTGGATCACAGTGGTCCACACAAAGAAGCAGAACAGTATATCGCTCGCGTCTTTAACGCAGACCGCAGCTACATGGTGACCAACGGTACTTCCACTGCGAACAAAATTGTTGGTATGTACTCTGCTCCAGCAGGCAGCACCATTCTGATTGACCGTAACTGCCACAAATCGCTGACCCACCTGATGATGATGAGCGATGTTACGCCAATCTATTTCCGCCCGACCCGTAACGCTTACGGTATTCTTGGTGGTATCCCACAGAGTGAATTCCAGCACGCTACCATTGCTAAGCGCGTGAAAGAAACACCAAACGCAACCTGGCCGGTACATGCTGTAATTACCAACTCTACCTATGATGGTCTGCTGTACAACACCGACTTCATCAAGAAAACACTGGATGTGAAATCCATCCACTTTGACTCCGCGTGGGTGCCTTACACCAACTTCTCACCGATTTACGAAGGTAAATGCGGTATGAGCGGTGGCCGTGTAGAAGGGAAAGTGATTTACGAAACCCAGTCCACTCACAAACTGCTGGCGGCGTTCTCTCAGGCTTCCATGATCCACGTTAAAGGTGACGTAAACGAAGAAACCTTTAACGAAGCCTACATGATGCACACCACCACTTCTCCGCACTACGGTATCGTGGCGTCCACTGAAACCGCTGCGGCGATGATGAAAGGCAATGCAGGTAAGCGTCTGATCAACGGTTCTATTGAACGTGCGATCAAATTCCGTAAAGAGATCAAACGTCTGAGAACGGAATCTGATGGCTGGTTCTTTGATGTATGGCAGCCGGATCATATCGATACGACTGAATGCTGGCCGCTGCGTTCTGACAGCACCTGGCACGGCTTCAAAAACATCGATAACGAGCACATGTATCTTGACCCGATCAAAGTCACCCTGCTGACTCCGGGGATGGAAAAAGACGGCACCATGAGCGACTTTGGTATTCCGGCCAGCATCGTGGCGAAATACCTCGACGAACATGGCATCGTTGTTGAGAAAACCGGTCCGTATAACCTGCTGTTCCTGTTCAGCATCGGTATCGATAAGACCAAAGCACTGAGCCTGCTGCGTGCTCTGACTGACTTTAAACGTGCGTTCGACCTGAACCTGCGTGTGAAAAACATGCTGCCGTCTCTGTATCGTGAAGATCCTGAATTCTATGAAAACATGCGTATTCAGGAACTGGCTCAGAATATCCACAAACTGATTGTTCACCACAATCTGCCGGATCTGATGTATCGCGCATTTGAAGTGCTGCCGACGATGGTAATGACTCCGTATGCTGCATTCCAGAAAGAGCTGCACGGTATGACCGAAGAAGTTTACCTCGACGAAATGGTAGGTCGTATTAACGCCAATATGATCCTTCCGTACCCGCCGGGAGTTCCTCTGGTAATGCCGGGTGAAATGATCACCGAAGAAAGCCGTCCGGTTCTGGAGTTCCTGCAGATGCTGTGTGAAATCGGCGCTCACTATCCGGGCTTTGAAACCGATATTCACGGTGCATACCGTCAGGCTGATGGCCGCTATACCGTTAAGGTATTGAAAGAAGAAAGCAAAAAATAA", + "dna_sequence_length": 2148, + "functions": [ + "lysine decarboxylase, acid-inducible" + ], + "id": "CDS_4050", + "location": [ + [ + "NC_000913", + 4358617, + "-", + 2148 + ] + ], + "md5": "1d299d714ee2d71e731e32a3cf57817d", + "parent_gene": "", + "protein_md5": "b640034e80a937d0aa8b98b1180e4740", + "protein_translation": "MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWDKYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK", + "protein_translation_length": 715, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013530" + ], + [ + "gene_synonym", + "ECK4126" + ], + [ + "gene_synonym", + "EcoGene:EG10132" + ], + [ + "gene_synonym", + "GI:16131958" + ], + [ + "gene_synonym", + "GeneID:948654" + ], + [ + "gene_synonym", + "JW4093" + ], + [ + "gene_synonym", + "NP_418556.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAE8" + ], + [ + "gene_synonym", + "b4132" + ], + [ + "gene_synonym", + "cadB" + ] + ], + "dna_sequence": "ATGAGTTCTGCCAAGAAGATCGGGCTATTTGCCTGTACCGGTGTTGTTGCCGGTAATATGATGGGGAGCGGTATTGCATTATTACCTGCGAACCTAGCAAGTATCGGTGGTATTGCTATCTGGGGTTGGATTATCTCTATTATTGGTGCAATGTCGCTGGCGTATGTATATGCCCGACTGGCAACAAAAAACCCGCAACAAGGTGGCCCAATTGCTTATGCCGGAGAAATTTCCCCTGCATTTGGTTTTCAGACAGGTGTTCTTTATTACCATGCTAACTGGATTGGTAACCTGGCGATTGGTATTACCGCTGTATCTTATCTTTCCACCTTCTTCCCAGTATTAAATGATCCTGTTCCGGCGGGTATCGCCTGTATTGCTATCGTCTGGGTATTTACCTTTGTAAATATGCTCGGCGGTACTTGGGTAAGCCGTTTAACCACTATTGGTCTGGTGCTGGTTCTTATTCCTGTGGTGATGACTGCTATTGTTGGCTGGCATTGGTTTGATGCGGCAACTTATGCAGCTAACTGGAATACTGCGGATACCACTGATGGTCATGCGATCATTAAAAGTATTCTGCTCTGCCTGTGGGCCTTCGTGGGTGTTGAATCCGCAGCTGTAAGTACTGGTATGGTTAAAAACCCGAAACGTACCGTTCCGCTGGCAACCATGCTGGGTACTGGTTTAGCAGGTATTGTTTACATCGCTGCGACTCAGGTGCTTTCCGGTATGTATCCGTCTTCTGTAATGGCGGCTTCCGGTGCTCCGTTTGCAATCAGTGCTTCAACTATCCTCGGTAACTGGGCTGCGCCGCTGGTTTCTGCATTCACCGCCTTTGCGTGCCTGACTTCTCTGGGCTCCTGGATGATGTTGGTAGGCCAGGCAGGTGTACGTGCCGCTAACGACGGTAACTTCCCGAAAGTTTATGGTGAAGTCGACAGCAACGGTATTCCGAAAAAAGGTCTGCTGCTGGCTGCAGTGAAAATGACTGCCCTGATGATCCTTATCACTCTGATGAACTCTGCCGGTGGTAAAGCATCTGACCTGTTCGGTGAACTGACCGGTATCGCAGTACTGCTGACTATGCTGCCGTATTTCTACTCTTGCGTTGACCTGATTCGTTTTGAAGGCGTTAACATCCGCAACTTTGTCAGCCTGATCTGCTCTGTACTGGGTTGCGTGTTCTGCTTCATCGCGCTGATGGGCGCAAGCTCCTTCGAGCTGGCAGGTACCTTCATCGTCAGCCTGATTATCCTGATGTTCTACGCTCGCAAAATGCACGAGCGCCAGAGCCACTCAATGGATAACCACACCGCGTCTAACGCACATTAA", + "dna_sequence_length": 1335, + "functions": [ + "putative lysine/cadaverine transporter" + ], + "id": "CDS_4051", + "location": [ + [ + "NC_000913", + 4360031, + "-", + 1335 + ] + ], + "md5": "43090406da5ccdd9b3d96c1ffffe3587", + "parent_gene": "", + "protein_md5": "2570cb8316ae4b95c2b5d701a994e9e2", + "protein_translation": "MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIILMFYARKMHERQSHSMDNHTASNAH", + "protein_translation_length": 444, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013532" + ], + [ + "gene_synonym", + "ECK4127" + ], + [ + "gene_synonym", + "EcoGene:EG10133" + ], + [ + "gene_synonym", + "GI:16131959" + ], + [ + "gene_synonym", + "GeneID:948653" + ], + [ + "gene_synonym", + "JW4094" + ], + [ + "gene_synonym", + "NP_418557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23890" + ], + [ + "gene_synonym", + "b4133" + ], + [ + "gene_synonym", + "cadC" + ] + ], + "dna_sequence": "ATGCAACAACCTGTAGTTCGCGTTGGCGAATGGCTTGTTACTCCGTCCATAAACCAAATTAGCCGCAATGGGCGTCAACTTACCCTTGAGCCGAGATTAATCGATCTTCTGGTTTTCTTTGCTCAACACAGTGGCGAAGTACTTAGCAGGGATGAACTTATCGATAATGTCTGGAAGAGAAGTATTGTCACCAATCACGTTGTGACGCAGAGTATCTCAGAACTACGTAAGTCATTAAAAGATAATGATGAAGATAGTCCTGTCTATATCGCTACTGTACCAAAGCGCGGCTATAAATTAATGGTGCCGGTTATCTGGTACAGCGAAGAAGAGGGAGAGGAAATAATGCTATCTTCGCCTCCCCCTATACCAGAGGCGGTTCCTGCCACAGATTCTCCCTCCCACAGTCTTAACATTCAAAACACCGCAACGCCACCTGAACAATCCCCAGTTAAAAGCAAACGATTCACTACCTTTTGGGTATGGTTTTTTTTCCTGTTGTCGTTAGGTATCTGTGTAGCACTGGTAGCGTTTTCAAGTCTTGATACACGTCTTCCTATGAGCAAATCGCGTATTTTGCTCAATCCACGCGATATTGACATTAATATGGTAAATAAAAGTTGTAACAGCTGGAGTTCCCCGTATCAGCTCTCTTACGCGATAGGCGTGGGTGATTTGGTGGCGACATCACTTAACACCTTCTCCACCTTTATGGTGCATGACAAAATCAACTACAACATTGATGAACCGAGCAGTTCCGGTAAAACATTATCTATTGCGTTTGTTAATCAGCGCCAATACCGTGCTCAACAATGCTTTATGTCGATAAAATTGGTAGACAATGCAGATGGTTCAACCATGCTGGATAAACGTTATGTCATCACTAACGGTAATCAGCTGGCGATTCAAAATGATTTACTGGAGAGTTTATCAAAAGCGTTAAACCAACCGTGGCCACAACGAATGCAGGAGACGCTCCAGAAAATTTTGCCGCATCGTGGTGCGTTATTAACTAATTTTTATCAGGCACATGATTATTTACTGCATGGCGATGATAAATCATTGAACCGTGCCAGTGAATTATTAGGTGAGATTGTTCAATCATCCCCAGAATTTACCTACGCGAGAGCAGAAAAAGCATTAGTTGATATCGTGCGCCATTCTCAACATCCTTTAGATGAAAAACAATTAGCAGCACTGAACACAGAAATAGATAACATTGTTACACTGCCGGAATTGAACAACCTGTCCATTATATATCAAATAAAAGCGGTCAGTGCTCTGGTAAAAGGTAAAACAGATGAGTCTTACCAGGCGATAAATACTGGCATTGATCTTGAAATGTCCTGGCTAAATTATGTGTTGCTTGGCAAGGTTTATGAAATGAAGGGGATGAACCGGGAAGCAGCTGATGCATATCTCACCGCCTTTAATTTACGCCCAGGGGCAAACACCCTTTACTGGATTGAAAATGGTATATTCCAGACTTCTGTTCCTTATGTTGTACCTTATCTCGACAAATTTCTTGCTTCAGAATAA", + "dna_sequence_length": 1539, + "functions": [ + "cadBA operon transcriptional activator" + ], + "id": "CDS_4052", + "location": [ + [ + "NC_000913", + 4361934, + "-", + 1539 + ] + ], + "md5": "fc53015879af2da76284e20957e060d4", + "parent_gene": "", + "protein_md5": "7f1b90f0b7284853cc73fd05d36b37b4", + "protein_translation": "MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWYSEEEGEEIMLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFWVWFFFLLSLGICVALVAFSSLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSTFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4457" + ], + [ + "gene_synonym", + "EcoGene:EG14452" + ], + [ + "gene_synonym", + "GeneID:5625580" + ], + [ + "gene_synonym", + "b4654" + ], + [ + "gene_synonym", + "yjdQ" + ] + ], + "dna_sequence": "CGTGATGCTGTTGAACGTCAAATGACGTCATCAGGAGCGTAACGCATCCATAAAGCACAACACCGGTCTGAACGGCGACTGATGTGAGATTTTCTGAATGAGAACAAAGAGAAATGTATCAGTTCGCTTGCTCATGCAAAGACTAACAATCCATTAAAATAGTAA", + "dna_sequence_length": 165, + "id": "CDS_4053", + "location": [ + [ + "NC_000913", + 4362353, + "-", + 84 + ], + [ + "NC_000913", + 4362271, + "-", + 81 + ] + ], + "md5": "e2c3112dcd5afd34e38631c95adffcc2", + "parent_gene": "", + "protein_md5": "8fdf942b2d01f2162de47e34fcae5f86", + "protein_translation": "RDAVERQMTSSGA", + "protein_translation_length": 13, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013537" + ], + [ + "gene_synonym", + "ECK4129" + ], + [ + "gene_synonym", + "EcoGene:EG12176" + ], + [ + "gene_synonym", + "GI:90111689" + ], + [ + "gene_synonym", + "GeneID:948650" + ], + [ + "gene_synonym", + "JW5733" + ], + [ + "gene_synonym", + "NP_418558.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU7" + ], + [ + "gene_synonym", + "b4135" + ], + [ + "gene_synonym", + "cutA3" + ], + [ + "gene_synonym", + "yjdC" + ] + ], + "dna_sequence": "GTGCAACGTGAAGATGTACTGGGAGAAGCCCTGAAATTATTAGAATTACAAGGGATTGCCAACACCACGCTGGAGATGGTTGCTGAACGTGTGGATTATCCACTGGACGAGCTACGCCGCTTCTGGCCAGACAAAGAGGCAATCCTCTACGATGCGCTGCGTTATCTTAGCCAACAGATAGATGTCTGGCGTCGTCAGCTGATGCTGGACGAAACGCAAACCGCCGAACAAAAGCTGCTGGCACGTTATCAGGCGTTATCGGAGTGCGTTAAAAACAACCGCTATCCGGGCTGTCTATTTATCGCTGCCTGTACGTTTTATCCCGATCCTGGCCACCCTATTCATCAACTGGCCGATCAGCAAAAAAGCGCGGCCTACGATTTCACCCACGAACTGTTAACCACACTGGAAGTTGACGATCCGGCGATGGTAGCAAAGCAGATGGAACTGGTGCTGGAAGGCTGTTTAAGCCGAATGCTGGTGAATCGTAGCCAGGCGGATGTCGACACTGCACATCGGCTGGCGGAAGATATCCTGCGCTTCGCCCGCTGCCGCCAGGGTGGTGCATTGACCTGA", + "dna_sequence_length": 576, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4054", + "location": [ + [ + "NC_000913", + 4363308, + "-", + 576 + ] + ], + "md5": "68d569f2f2f3f8994b919cebc5e9c232", + "parent_gene": "", + "protein_md5": "7a4da0ad506c78dfcb5fee428295a804", + "protein_translation": "MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013539" + ], + [ + "gene_synonym", + "ECK4130" + ], + [ + "gene_synonym", + "EcoGene:EG12178" + ], + [ + "gene_synonym", + "GI:16131961" + ], + [ + "gene_synonym", + "GeneID:948649" + ], + [ + "gene_synonym", + "JW5734" + ], + [ + "gene_synonym", + "NP_418559.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36655" + ], + [ + "gene_synonym", + "b4136" + ], + [ + "gene_synonym", + "cutA2" + ], + [ + "gene_synonym", + "cycZ" + ], + [ + "gene_synonym", + "dipZ" + ], + [ + "gene_synonym", + "dsbD" + ], + [ + "gene_synonym", + "htrI" + ] + ], + "dna_sequence": "ATGGCTCAACGCATCTTTACGCTGATCCTGCTACTTTGCAGCACTTCCGTTTTTGCCGGATTATTCGACGCGCCGGGACGTTCACAATTTGTCCCCGCGGATCAAGCCTTTGCTTTTGATTTTCAGCAAAACCAACATGACCTTAATCTGACCTGGCAGATCAAAGACGGTTACTACCTCTACCGTAAACAGATCCGCATTACGCCGGAACACGCGAAAATTGCCGACGTGCAGCTGCCGCAAGGCGTCTGGCATGAAGATGAGTTTTACGGCAAAAGCGAGATTTACCGCGATCGGCTGACGCTTCCCGTCACCATCAACCAGGCGAGTGCGGGAGCGACGTTAACTGTCACCTACCAGGGCTGTGCTGATGCCGGTTTCTGTTATCCGCCAGAAACCAAAACCGTTCCGTTAAGCGAAGTGGTCGCCAACAACGCAGCGCCACAGCCTGTGTCTGTTCCGCAGCAAGAGCAGCCCACCGCGCAATTGCCCTTTTCCGCGCTCTGGGCGTTGTTGATCGGTATTGGTATCGCCTTTACGCCATGCGTGCTGCCAATGTACCCACTGATTTCTGGCATCGTGCTGGGTGGTAAACAGCGGCTCTCCACTGCCAGAGCATTGTTGCTGACCTTTATTTATGTGCAGGGGATGGCGCTGACCTACACGGCGCTGGGTCTGGTGGTTGCCGCCGCAGGGTTACAGTTCCAGGCGGCGCTACAGCACCCATACGTGCTCATTGGCCTCGCCATCGTCTTTACCTTGCTGGCGATGTCAATGTTTGGCTTGTTTACCCTGCAACTCCCCTCTTCGCTGCAAACACGTCTCACGTTGATGAGCAATCGCCAACAGGGCGGCTCACCTGGCGGTGTGTTTGTTATGGGGGCGATTGCCGGACTGATCTGTTCACCATGCACCACCGCACCGCTTAGCGCGATTCTGCTGTATATCGCCCAAAGCGGGAACATGTGGCTGGGCGGCGGCACGCTTTATCTCTATGCGTTGGGCATGGGCCTGCCGCTGATGCTAATTACCGTCTTTGGTAACCGCTTGCTGCCGAAAAGCGGCCCGTGGATGGAACAAGTCAAAACCGCGTTTGGTTTTGTGATCCTCGCACTGCCGGTCTTCCTGCTGGAGCGAGTGATTGGTGATGTATGGGGATTACGCTTGTGGTCGGCGCTGGGTGTCGCATTCTTTGGCTGGGCCTTTATCACCAGCCTACAGGCTAAACGCGGCTGGATGCGTATTGTGCAAATTATTCTGCTGGCAGCGGCATTGGTTAGCGTGCGCCCACTTCAGGATTGGGCATTTGGTGCGACGCATACCGCGCAAACTCAGACGCATCTCAACTTTACACAAATCAAAACGGTAGATGAGTTAAATCAGGCGCTCGTTGAAGCCAAAGGCAAACCGGTGATGTTAGATCTTTATGCCGACTGGTGCGTCGCCTGTAAAGAGTTTGAGAAATACACCTTCAGCGACCCGCAGGTGCAAAAAGCGTTAGCAGACACGGTCTTACTTCAGGCCAACGTCACGGCCAACGACGCACAAGATGTGGCGCTGTTAAAGCATCTTAATGTCCTTGGCCTACCGACAATTCTCTTTTTTGACGGACAAGGCCAGGAGCATCCACAAGCACGCGTCACGGGCTTTATGGATGCTGAAACCTTCAGCGCACATTTGCGCGATCGCCAACCGTGA", + "dna_sequence_length": 1698, + "functions": [ + "thiol:disulfide interchange protein and activator of DsbC" + ], + "id": "CDS_4055", + "location": [ + [ + "NC_000913", + 4365042, + "-", + 1698 + ] + ], + "md5": "a3298de2138a54a5c3d6bbd6afd07c65", + "parent_gene": "", + "protein_md5": "1cc2b33a587a076b516310fb2c6221c5", + "protein_translation": "MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFAFDFQQNQHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAAPQPVSVPQQEQPTAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQAKRGWMRIVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP", + "protein_translation_length": 565, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013544" + ], + [ + "gene_synonym", + "ECK4131" + ], + [ + "gene_synonym", + "EcoGene:EG12177" + ], + [ + "gene_synonym", + "GI:16131962" + ], + [ + "gene_synonym", + "GeneID:948660" + ], + [ + "gene_synonym", + "JW4097" + ], + [ + "gene_synonym", + "NP_418560.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69488" + ], + [ + "gene_synonym", + "b4137" + ], + [ + "gene_synonym", + "cutA" + ], + [ + "gene_synonym", + "cutA1" + ], + [ + "gene_synonym", + "cycY" + ] + ], + "dna_sequence": "ATGCTTGATGAAAAAAGTTCGAATACCGCGTCTGTCGTGGTGCTATGTACGGCACCAGATGAAGCGACAGCCCAGGATTTAGCCGCCAAAGTGCTGGCGGAAAAACTGGCGGCCTGCGCGACCTTGATCCCCGGCGCTACCTCTCTCTATTACTGGGAAGGTAAGCTGGAGCAAGAATACGAAGTGCAGATGATTTTAAAAACTACCGTATCTCACCAGCAGGCACTGCTGGAATGCCTGAAGTCTCATCATCCATATCAAACCCCGGAACTTCTGGTTTTACCTGTTACACACGGAGACACAGATTACCTCTCATGGCTCAACGCATCTTTACGCTGA", + "dna_sequence_length": 339, + "functions": [ + "divalent-cation tolerance protein, copper sensitivity" + ], + "id": "CDS_4056", + "location": [ + [ + "NC_000913", + 4365356, + "-", + 339 + ] + ], + "md5": "2623b8670ccb7842066e21f5802b85ea", + "parent_gene": "", + "protein_md5": "9de8c859930b5dd0da696c9e2c30583b", + "protein_translation": "MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR", + "protein_translation_length": 112, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013546" + ], + [ + "gene_synonym", + "ECK4132" + ], + [ + "gene_synonym", + "EcoGene:EG11225" + ], + [ + "gene_synonym", + "GI:16131963" + ], + [ + "gene_synonym", + "GeneID:948659" + ], + [ + "gene_synonym", + "JW5735" + ], + [ + "gene_synonym", + "NP_418561.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABN5" + ], + [ + "gene_synonym", + "b4138" + ], + [ + "gene_synonym", + "dcuA" + ], + [ + "gene_synonym", + "genA" + ] + ], + "dna_sequence": "ATGCTAGTTGTAGAACTCATCATAGTTTTGCTGGCGATCTTCTTGGGCGCCAGATTGGGGGGAATAGGTATTGGTTTTGCAGGCGGATTGGGGGTGCTGGTTCTTGCCGCTATTGGCGTTAAACCCGGTAACATCCCGTTCGATGTCATCTCCATTATCATGGCGGTTATCGCCGCTATTTCTGCCATGCAGGTTGCTGGCGGTCTGGACTATCTGGTTCATCAGACAGAAAAGCTGCTGCGCCGTAACCCGAAATACATCACGATCCTCGCACCGATCGTGACCTATTTCCTGACTATCTTTGCTGGTACTGGCAACATCTCTCTGGCGACACTGCCAGTTATCGCTGAAGTTGCGAAGGAACAAGGCGTTAAACCTTGCCGTCCGCTGTCTACTGCAGTGGTATCCGCGCAGATTGCGATCACCGCATCGCCAATCTCAGCGGCAGTGGTTTACATGTCTTCCGTGATGGAAGGTCATGGCATCAGCTACCTCCATCTGCTCTCCGTGGTCATCCCGTCCACCCTGCTGGCGGTTCTGGTGATGTCCTTCCTGGTCACTATGCTGTTCAACTCCAAACTCTCTGACGATCCGATTTATCGCAAGCGTCTGGAAGAGGGCCTGGTTGAACTGCGCGGTGAAAAGCAGATTGAAATCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGGGTCTGGTTGAAAAACCGCTGATGAACACCACCAACGCAATCCTGATCATCATGCTCAGCGTTGCAACTCTGACCACCGTTATCTGTAAAGTCGATACCGACAACATCCTCAACTCCAGCACCTTCAAAGCAGGTATGAGCGCCTGTATTTGTATCCTGGGTGTTGCGTGGCTGGGCGATACTTTCGTTTCCAACAACATCGACTGGATCAAAGATACCGCTGGTGAAGTGATTCAGGGTCATCCGTGGCTGCTGGCCGTCATCTTCTTCTTTGCTTCTGCTCTGCTGTACTCTCAGGCTGCAACCGCAAAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGTCTGGTCTGTTCATTCTGCCGACCTACCCGACGCTGGTTGCTGCGGTACAGATGGATGACACGGGTACTACCCGTATCGGTAAATTCGTCTTCAACCATCCGTTCTTCATCCCGGGTACTCTGGGTGTTGCCCTGGCCGTTTGCTTCGGCTTCGTGCTGGGTAGCTTCATGCTGTAA", + "dna_sequence_length": 1302, + "functions": [ + "C4-dicarboxylate antiporter" + ], + "id": "CDS_4057", + "location": [ + [ + "NC_000913", + 4366773, + "-", + 1302 + ] + ], + "md5": "06d6cf15f393aac9ac41c1dad021017e", + "parent_gene": "", + "protein_md5": "2a0aa537b76cdffcf3f95666d621742b", + "protein_translation": "MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGNIPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFAGTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGHGISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIEIKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVICKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLAVIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQMDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML", + "protein_translation_length": 433, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013551" + ], + [ + "gene_synonym", + "ECK4133" + ], + [ + "gene_synonym", + "EcoGene:EG10095" + ], + [ + "gene_synonym", + "GI:90111690" + ], + [ + "gene_synonym", + "GeneID:948658" + ], + [ + "gene_synonym", + "JW4099" + ], + [ + "gene_synonym", + "NP_418562.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC38" + ], + [ + "gene_synonym", + "aspA" + ], + [ + "gene_synonym", + "b4139" + ] + ], + "dna_sequence": "ATGTCAAACAACATTCGTATCGAAGAAGATCTGTTGGGTACCAGGGAAGTTCCAGCTGATGCCTACTATGGTGTTCACACTCTGAGAGCGATTGAAAACTTCTATATCAGCAACAACAAAATCAGTGATATTCCTGAATTTGTTCGCGGTATGGTAATGGTTAAAAAAGCCGCAGCTATGGCAAACAAAGAGCTGCAAACCATTCCTAAAAGTGTAGCGAATGCCATCATTGCCGCATGTGATGAAGTCCTGAACAACGGAAAATGCATGGATCAGTTCCCGGTAGACGTCTACCAGGGCGGCGCAGGTACTTCCGTAAACATGAACACCAACGAAGTGCTGGCCAATATCGGTCTGGAACTGATGGGTCACCAAAAAGGTGAATATCAGTACCTGAACCCGAACGACCATGTTAACAAATGTCAGTCCACTAACGACGCCTACCCGACCGGTTTCCGTATCGCAGTTTACTCTTCCCTGATTAAGCTGGTAGATGCGATTAACCAACTGCGTGAAGGCTTTGAACGTAAAGCTGTCGAATTCCAGGACATCCTGAAAATGGGTCGTACCCAGCTGCAGGACGCAGTACCGATGACCCTCGGTCAGGAATTCCGCGCTTTCAGCATCCTGCTGAAAGAAGAAGTGAAAAACATCCAACGTACCGCTGAACTGCTGCTGGAAGTTAACCTTGGTGCAACAGCAATCGGTACTGGTCTGAACACGCCGAAAGAGTACTCTCCGCTGGCAGTGAAAAAACTGGCTGAAGTTACTGGCTTCCCATGCGTACCGGCTGAAGACCTGATCGAAGCGACCTCTGACTGCGGCGCTTATGTTATGGTTCACGGCGCGCTGAAACGCCTGGCTGTGAAGATGTCCAAAATCTGTAACGACCTGCGCTTGCTCTCTTCAGGCCCACGTGCCGGCCTGAACGAGATCAACCTGCCGGAACTGCAGGCGGGCTCTTCCATCATGCCAGCTAAAGTAAACCCGGTTGTTCCGGAAGTGGTTAACCAGGTATGCTTCAAAGTCATCGGTAACGACACCACTGTTACCATGGCAGCAGAAGCAGGTCAGCTGCAGTTGAACGTTATGGAGCCGGTCATTGGCCAGGCCATGTTCGAATCCGTTCACATTCTGACCAACGCTTGCTACAACCTGCTGGAAAAATGCATTAACGGCATCACTGCTAACAAAGAAGTGTGCGAAGGTTACGTTTACAACTCTATCGGTATCGTTACTTACCTGAACCCGTTCATCGGTCACCACAACGGTGACATCGTGGGTAAAATCTGTGCCGAAACCGGTAAGAGTGTACGTGAAGTCGTTCTGGAACGCGGTCTGTTGACTGAAGCGGAACTTGACGATATTTTCTCCGTACAGAATCTGATGCACCCGGCTTACAAAGCAAAACGCTATACTGATGAAAGCGAACAGTAA", + "dna_sequence_length": 1437, + "functions": [ + "aspartate ammonia-lyase" + ], + "id": "CDS_4058", + "location": [ + [ + "NC_000913", + 4368327, + "-", + 1437 + ] + ], + "md5": "800fa562ca8828bb082ff581bdc7a34f", + "parent_gene": "", + "protein_md5": "450d855a66b57220e455c3824dd9226b", + "protein_translation": "MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPAYKAKRYTDESEQ", + "protein_translation_length": 478, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013557" + ], + [ + "gene_synonym", + "ECK4134" + ], + [ + "gene_synonym", + "EcoGene:EG12382" + ], + [ + "gene_synonym", + "GI:90111691" + ], + [ + "gene_synonym", + "GeneID:948657" + ], + [ + "gene_synonym", + "JW4100" + ], + [ + "gene_synonym", + "NP_418564.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37147" + ], + [ + "gene_synonym", + "b4140" + ], + [ + "gene_synonym", + "fxsA" + ], + [ + "gene_synonym", + "yjeG" + ] + ], + "dna_sequence": "TTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGTGTTTCGCTGATCATTGCTGGTTTGCTGCTTTTATTACCGGGCTTTTTTACCGACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAA", + "dna_sequence_length": 477, + "functions": [ + "suppressor of F exclusion of phage T7" + ], + "id": "CDS_4059", + "location": [ + [ + "NC_000913", + 4368664, + "+", + 477 + ] + ], + "md5": "67b5d5b6b3654532440ae1b5c541414a", + "parent_gene": "", + "protein_md5": "8dd7fa1ef4f311e5fccaae1be8efd683", + "protein_translation": "MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD", + "protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013559" + ], + [ + "gene_synonym", + "ECK4135" + ], + [ + "gene_synonym", + "EcoGene:EG12470" + ], + [ + "gene_synonym", + "GI:16131966" + ], + [ + "gene_synonym", + "GeneID:948656" + ], + [ + "gene_synonym", + "JW4101" + ], + [ + "gene_synonym", + "NP_418565.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39277" + ], + [ + "gene_synonym", + "b4141" + ], + [ + "gene_synonym", + "yjeH" + ] + ], + "dna_sequence": "ATGAGTGGACTCAAACAAGAACTGGGGCTGGCCCAGGGCATTGGCCTGCTATCGACGTCATTATTAGGCACTGGCGTGTTTGCCGTTCCTGCGTTAGCTGCGCTGGTAGCGGGCAATAACAGCCTGTGGGCGTGGCCCGTTTTGATTATCTTAGTGTTCCCGATTGCGATTGTGTTTGCGATTCTGGGTCGCCACTATCCCAGCGCAGGCGGCGTCGCGCACTTCGTCGGTATGGCGTTTGGTTCGCGGCTTGAGCGAGTCACCGGCTGGCTGTTTTTATCGGTCATTCCCGTGGGTTTGCCTGCCGCACTACAAATTGCCGCCGGGTTCGGCCAGGCGATGTTTGGCTGGCATAGCTGGCAACTGTTGTTGGCAGAACTCGGTACGCTGGCGCTGGTGTGGTATATCGGTACTCGCGGTGCCAGTTCCAGTGCTAATCTACAAACCGTTATTGCCGGACTTATCGTCGCGCTGATTGTCGCTATCTGGTGGGCGGGCGATATCAAACCTGCGAATATCCCCTTTCCGGCACCTGGTAATATCGAACTTACCGGGTTATTTGCTGCGTTATCAGTGATGTTCTGGTGTTTTGTCGGTCTGGAGGCATTTGCCCATCTCGCCTCGGAATTTAAAAATCCAGAGCGTGATTTTCCTCGTGCTTTGATGATTGGTCTGCTGCTGGCAGGATTAGTCTACTGGGGCTGTACGGTAGTCGTCTTACACTTCGACGCCTATGGTGAAAAAATGGCGGCGGCAGCATCGCTTCCAAAAATTGTAGTGCAGTTGTTCGGTGTAGGAGCGTTATGGATTGCCTGCGTGATTGGCTATCTGGCCTGCTTTGCCAGTCTCAACATTTATATACAGAGCTTCGCCCGCCTGGTCTGGTCGCAGGCGCAACATAATCCTGACCACTACCTGGCACGCCTCTCTTCTCGCCATATCCCGAATAATGCCCTCAATGCGGTGCTCGGCTGCTGTGTGGTGAGCACTTTGGTGATTCATGCTTTAGAGATCAATCTGGACGCTCTTATTATTTATGCCAATGGCATCTTTATTATGATTTATCTGTTATGCATGCTGGCAGGCTGTAAATTATTGCAAGGACGTTATCGACTACTGGCGGTGGTTGGCGGGCTGTTATGCGTTCTGTTACTGGCAATGGTCGGCTGGAAAAGTCTCTATGCGCTGATCATGCTGGCGGGGTTATGGCTGTTGCTGCCAAAACGAAAAACGCCGGAAAATGGCATAACCACATAA", + "dna_sequence_length": 1257, + "functions": [ + "putative transporter" + ], + "id": "CDS_4060", + "location": [ + [ + "NC_000913", + 4370412, + "-", + 1257 + ] + ], + "md5": "5e068c9ed77c21b13b37ada5a9db6fe6", + "parent_gene": "", + "protein_md5": "443338159b9dde7db20435418ba54934", + "protein_translation": "MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT", + "protein_translation_length": 418, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013566" + ], + [ + "gene_synonym", + "ECK4136" + ], + [ + "gene_synonym", + "EcoGene:EG10600" + ], + [ + "gene_synonym", + "GI:16131967" + ], + [ + "gene_synonym", + "GeneID:948655" + ], + [ + "gene_synonym", + "JW4102" + ], + [ + "gene_synonym", + "NP_418566.1" + ], + [ + "gene_synonym", + "TabB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6F9" + ], + [ + "gene_synonym", + "b4142" + ], + [ + "gene_synonym", + "groES" + ], + [ + "gene_synonym", + "groS" + ], + [ + "gene_synonym", + "mopB" + ] + ], + "dna_sequence": "ATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGGCTCTGCAGCGGCTAAATCCACCCGCGGCGAAGTGCTGGCTGTCGGCAATGGCCGTATCCTTGAAAATGGCGAAGTGAAGCCGCTGGATGTGAAAGTTGGCGACATCGTTATTTTCAACGATGGCTACGGTGTGAAATCTGAGAAGATCGACAATGAAGAAGTGTTGATCATGTCCGAAAGCGACATTCTGGCAATTGTTGAAGCGTAA", + "dna_sequence_length": 294, + "functions": [ + "Cpn10 chaperonin GroES, small subunit of GroESL" + ], + "id": "CDS_4061", + "location": [ + [ + "NC_000913", + 4370688, + "+", + 294 + ] + ], + "md5": "f90c55dc44a2014d3ed8d5b8b76cd3e9", + "parent_gene": "", + "protein_md5": "14aed608b903e87469e861e7f4f44d91", + "protein_translation": "MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013568" + ], + [ + "gene_synonym", + "ECK4137" + ], + [ + "gene_synonym", + "EcoGene:EG10599" + ], + [ + "gene_synonym", + "GI:16131968" + ], + [ + "gene_synonym", + "GeneID:948665" + ], + [ + "gene_synonym", + "JW4103" + ], + [ + "gene_synonym", + "NP_418567.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6F5" + ], + [ + "gene_synonym", + "b4143" + ], + [ + "gene_synonym", + "groEL" + ], + [ + "gene_synonym", + "groL" + ], + [ + "gene_synonym", + "mopA" + ] + ], + "dna_sequence": "ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGCGGCGTAAACGTACTGGCAGATGCAGTGAAAGTTACCCTCGGTCCAAAAGGCCGTAACGTAGTTCTGGATAAATCTTTCGGTGCACCGACCATCACCAAAGATGGTGTTTCCGTTGCTCGTGAAATCGAACTGGAAGACAAGTTCGAAAATATGGGTGCGCAGATGGTGAAAGAAGTTGCCTCTAAAGCAAACGACGCTGCAGGCGACGGTACCACCACTGCAACCGTACTGGCTCAGGCTATCATCACTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTACCGCTGCAGTTGAAGAACTGAAAGCGCTGTCCGTACCATGCTCTGACTCTAAAGCGATTGCTCAGGTTGGTACCATCTCCGCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTGGAAGCTGTTGCCAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGATGTAGAAGGCGAAGCGCTGGCAACTCTGGTTGTTAACACCATGCGTGGCATCGTGAAAGTCGCTGCGGTTAAAGCACCGGGCTTCGGCGATCGTCGTAAAGCTATGCTGCAGGATATCGCAACCCTGACTGGCGGTACCGTGATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCAACCCTGGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTTGCAGTTATCAAAGTGGGTGCTGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGATGCCCTGCACGCGACCCGTGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGTGTTGCGCTGATCCGCGTAGCGTCTAAACTGGCTGACCTGCGTGGTCAGAACGAAGACCAGAACGTGGGTATCAAAGTTGCACTGCGTGCAATGGAAGCTCCGCTGCGTCAGATCGTATTGAACTGCGGCGAAGAACCGTCTGTTGTTGCTAACACCGTTAAAGGCGGCGACGGCAACTACGGTTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAA", + "dna_sequence_length": 1647, + "functions": [ + "Cpn60 chaperonin GroEL, large subunit of GroESL" + ], + "id": "CDS_4062", + "location": [ + [ + "NC_000913", + 4371025, + "+", + 1647 + ] + ], + "md5": "7652f06c3759158a1c9c5edd8fb860ca", + "parent_gene": "", + "protein_md5": "6279ec3722197af3533a9fd2b8d54074", + "protein_translation": "MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM", + "protein_translation_length": 548, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013572" + ], + [ + "gene_synonym", + "ECK4138" + ], + [ + "gene_synonym", + "EcoGene:EG12471" + ], + [ + "gene_synonym", + "GI:90111692" + ], + [ + "gene_synonym", + "GeneID:948664" + ], + [ + "gene_synonym", + "JW5736" + ], + [ + "gene_synonym", + "NP_418568.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF70" + ], + [ + "gene_synonym", + "b4144" + ], + [ + "gene_synonym", + "yjeI" + ] + ], + "dna_sequence": "ATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCATTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGTAGCCCGTCGCAGGGAATGTTGTCCAGTTTTGTCCCGACGGATAGCCAGATTATCGGTCAGGTTTATAAGTGCCCGAACTGA", + "dna_sequence_length": 354, + "functions": [ + "DUF4156 family lipoprotein" + ], + "id": "CDS_4063", + "location": [ + [ + "NC_000913", + 4372809, + "+", + 354 + ] + ], + "md5": "b6b285dea9e4d01c8fa142a4b3d4bbed", + "parent_gene": "", + "protein_md5": "b8fbd7e971e10d4cb10475b0eb1206c3", + "protein_translation": "MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013575" + ], + [ + "gene_synonym", + "ECK4139" + ], + [ + "gene_synonym", + "EcoGene:EG12472" + ], + [ + "gene_synonym", + "GI:16131970" + ], + [ + "gene_synonym", + "GeneID:948663" + ], + [ + "gene_synonym", + "JW4105" + ], + [ + "gene_synonym", + "NP_418569.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39279" + ], + [ + "gene_synonym", + "b4145" + ], + [ + "gene_synonym", + "yjeJ" + ] + ], + "dna_sequence": "ATGGCCATAAGCATCAAGGGTGTTAATACCGGTGTTATTCGCAAGAGTAATAATTTCATTGCACTGGCGCTGAAAATTAAAGAACCTCGCAATAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAAAGCATAAACTGGATGCTGCTGCACACCTTCAGTATGAGCAAGCTCGCGATAAAGTCATTAAGAAAATGGCAGAAAACATCCCAGAAATTCTGGTTGATGAGCTTAAAAATGCCGATATTAATCGTCGGGTTAACACGCTGGAACTTACCGATAATCAAGGCGAAAATCTTACCTTCGTATTAACGCTACATGACGGTAGCAAATGTGAGTTAGTCGTCAATGAGTTGCAGATTGAAATGCTGGCGCGAGCAATCATTCATGCAATTAATAATGCGGAAATGCGTGAACTGGCATTACGTATTACCTCACTGTTAGATTTCCTGCCGTTATACGACGTTGACTGCCAGGACAATGGCAATCTGGAATATGACACCTATTCCCAACCGGAATGGAAACATAACTTGTTCGACCATTATCTGGCGGTGCTTTACCGCTTTAAAGATGAAAGTGGCAAAGAACAATTTAGCGGCGCAGTGGTGAAAACGCGTGAAGCAACGCCGGGTAAAGAAATAGAAGCGATCACTCGCCGAATGCTTGATTTCAGCCCACGACTGAAAAAACTCGCGGGTGTGCCATGTCAGGTCTATGTTCGCACCGTAGCGGCGAATAACGCCCAACCGCTAACCCAGGATCAATGCTTACGCGCGCTGCATCACTTACGTGTTCAATCCACCAGCAAAACTGCACCACAGGCGAAATAA", + "dna_sequence_length": 870, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4064", + "location": [ + [ + "NC_000913", + 4374234, + "-", + 870 + ] + ], + "md5": "2e2371e3e879270a8b1f51d19c45998f", + "parent_gene": "", + "protein_md5": "3649205a63b972ca0709b327f57d9e2c", + "protein_translation": "MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDLLIALESRLHQKHKLDAAAHLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQDNGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTREATPGKEIEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013580" + ], + [ + "gene_synonym", + "ECK4140" + ], + [ + "gene_synonym", + "EcoGene:EG12473" + ], + [ + "gene_synonym", + "GI:16131971" + ], + [ + "gene_synonym", + "GeneID:948662" + ], + [ + "gene_synonym", + "JW4106" + ], + [ + "gene_synonym", + "NP_418570.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39280" + ], + [ + "gene_synonym", + "b4146" + ], + [ + "gene_synonym", + "epmB" + ], + [ + "gene_synonym", + "yjeK" + ] + ], + "dna_sequence": "ATGGCGCATATTGTAACCCTAAATACCCCATCCAGAGAAGATTGGTTAACGCAACTTGCCGATGTTGTGACCGATCCTGATGAACTTCTGCGTCTTTTGAATATAGACGCGGAGGAAAAACTGTTAGCCGGACGCAGCGCCAAAAAGCTTTTTGCCCTGCGTGTGCCCCGCTCATTTATCGATCGCATGGAGAAAGGCAATCCGGACGATCCTCTTTTGCGTCAGGTACTTACCTCGCAAGATGAGTTTGTCATCGCGCCCGGATTCTCCACCGACCCACTGGAAGAACAGCACAGCGTAGTGCCTGGTTTGTTGCATAAATACCACAACCGGGCGCTTTTGCTGGTCAAAGGCGGCTGCGCGGTAAATTGCCGCTATTGCTTCCGTCGTCACTTCCCCTATGCCGAAAATCAGGGCAACAAGCGTAACTGGCAAACTGCACTTGAGTATGTTGCTGCGCATCCGGAACTGGACGAGATGATTTTCTCCGGCGGCGATCCGCTGATGGCGAAAGATCACGAGCTGGACTGGTTGCTCACACAACTGGAAGCCATCCCGCATATAAAACGTCTGCGGATTCACAGCCGTCTGCCGATTGTGATCCCGGCACGTATCACCGAGGCGCTGGTTGAATGCTTTGCCCGTTCTACGCTGCAAATCTTGCTGGTGAATCACATCAACCATGCCAATGAGGTAGATGAAACATTCCGTCAGGCGATGGCTAAGTTGCGCCGGGTAGGCGTTACTTTGCTGAACCAGAGCGTTCTGTTACGTGATGTGAACGATAACGCACAAACGCTGGCAAACCTGAGTAATGCGTTGTTCGATGCCGGCGTAATGCCGTATTACCTGCATGTGCTCGATAAAGTACAGGGCGCGGCGCATTTTATGGTGAGTGATGACGAAGCACGGCAGATTATGCGTGAGTTGCTGACACTGGTGTCGGGATATCTGGTGCCGAAACTGGCGCGAGAAATTGGCGGCGAACCCAGCAAAACGCCGCTGGATCTCCAGCTACGCCAGCAGTAA", + "dna_sequence_length": 1029, + "functions": [ + "EF-P-Lys34 lysylation protein", + "weak lysine 2,3-aminomutase" + ], + "id": "CDS_4065", + "location": [ + [ + "NC_000913", + 4375657, + "-", + 1029 + ] + ], + "md5": "05eb3551420915e53eab2fdfe576021e", + "parent_gene": "", + "protein_md5": "d9ca4fd810107ac8293c5cde38c8f83f", + "protein_translation": "MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVIAPGFSTDPLEEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQLRQQ", + "protein_translation_length": 342, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013583" + ], + [ + "gene_synonym", + "ECK4141" + ], + [ + "gene_synonym", + "EcoGene:EG12099" + ], + [ + "gene_synonym", + "GI:16131972" + ], + [ + "gene_synonym", + "GeneID:948661" + ], + [ + "gene_synonym", + "JW4107" + ], + [ + "gene_synonym", + "NP_418571.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6N4" + ], + [ + "gene_synonym", + "b4147" + ], + [ + "gene_synonym", + "efp" + ] + ], + "dna_sequence": "ATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACGCGGTTGAAGCGAGTGAATTCGTAAAACCGGGTAAAGGCCAGGCATTTGCTCGCGTTAAACTGCGTCGTCTGCTGACCGGTACTCGCGTAGAAAAAACCTTCAAATCTACTGATTCCGCTGAAGGCGCTGATGTTGTCGATATGAACCTGACTTACCTGTACAACGACGGTGAGTTCTGGCACTTCATGAACAACGAAACTTTCGAGCAGCTGTCTGCTGATGCAAAAGCAATTGGTGACAACGCTAAATGGCTGCTGGATCAGGCAGAGTGTATCGTAACTCTGTGGAATGGTCAGCCGATCTCCGTTACTCCGCCGAACTTCGTTGAACTGGAAATCGTTGATACCGATCCGGGCCTGAAAGGTGATACCGCAGGTACTGGTGGCAAACCGGCTACCCTGTCTACTGGCGCTGTGGTTAAAGTTCCGCTGTTTGTACAAATCGGCGAAGTCATCAAAGTGGATACCCGCTCTGGTGAATACGTCTCTCGCGTGAAGTAA", + "dna_sequence_length": 567, + "functions": [ + "polyproline-specific translation elongation factor EF-P" + ], + "id": "CDS_4066", + "location": [ + [ + "NC_000913", + 4375699, + "+", + 567 + ] + ], + "md5": "f0e9d4773218f110de01a5b7b6fa3790", + "parent_gene": "", + "protein_md5": "8a819b1319a310a32369306016a392b8", + "protein_translation": "MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRSGEYVSRVK", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047210" + ], + [ + "gene_synonym", + "ECK4142" + ], + [ + "gene_synonym", + "EcoGene:EG14372" + ], + [ + "gene_synonym", + "GI:49176462" + ], + [ + "gene_synonym", + "GeneID:2847736" + ], + [ + "gene_synonym", + "JW5737" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADB4" + ], + [ + "gene_synonym", + "YP_026283.1" + ], + [ + "gene_synonym", + "b4410" + ], + [ + "gene_synonym", + "ecnA" + ] + ], + "dna_sequence": "ATGATGAAACGCCTTATCGTTCTTGTTTTGCTTGCCAGCACGCTGCTCACGGGCTGTAACACCGCTCGCGGTTTCGGCGAAGACATCAAACATCTCGGCAACTCCATCTCTCGCGCTGCCAGCTAA", + "dna_sequence_length": 126, + "functions": [ + "entericidin A membrane lipoprotein, antidote entericidin B" + ], + "id": "CDS_4067", + "location": [ + [ + "NC_000913", + 4376317, + "+", + 126 + ] + ], + "md5": "67aa71a0eea08f3bde823a62f621f06b", + "parent_gene": "", + "protein_md5": "812912794cc80a1be6472a871e11a1e4", + "protein_translation": "MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS", + "protein_translation_length": 41, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0047211" + ], + [ + "gene_synonym", + "ECK4143" + ], + [ + "gene_synonym", + "EcoGene:EG14345" + ], + [ + "gene_synonym", + "GI:49176463" + ], + [ + "gene_synonym", + "GeneID:2847737" + ], + [ + "gene_synonym", + "JW4108" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADB7" + ], + [ + "gene_synonym", + "YP_026284.1" + ], + [ + "gene_synonym", + "b4411" + ], + [ + "gene_synonym", + "ecnB" + ], + [ + "gene_synonym", + "yjeU" + ] + ], + "dna_sequence": "ATGGTGAAGAAGACAATTGCAGCGATCTTTTCTGTTCTGGTGCTTTCAACAGTATTAACTGCCTGCAACACCACGCGTGGCGTTGGTGAAGACATTTCTGATGGCGGTAACGCGATTTCTGGCGCAGCAACGAAAGCGCAGCAATAA", + "dna_sequence_length": 147, + "functions": [ + "entericidin B membrane lipoprotein" + ], + "id": "CDS_4068", + "location": [ + [ + "NC_000913", + 4376553, + "+", + 147 + ] + ], + "md5": "5a7c40c6267d2009ba695e1aacd69142", + "parent_gene": "", + "protein_md5": "8e45ccea21f648f7711eaa8914e50a61", + "protein_translation": "MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ", + "protein_translation_length": 48, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013588" + ], + [ + "gene_synonym", + "ECK4144" + ], + [ + "gene_synonym", + "EcoGene:EG11616" + ], + [ + "gene_synonym", + "GI:90111693" + ], + [ + "gene_synonym", + "GeneID:948671" + ], + [ + "gene_synonym", + "JW5738" + ], + [ + "gene_synonym", + "NP_418572.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69937" + ], + [ + "gene_synonym", + "b4148" + ], + [ + "gene_synonym", + "sugE" + ] + ], + "dna_sequence": "ATGTCCTGGATTATCTTAGTTATTGCTGGTCTGCTGGAAGTGGTATGGGCCGTTGGCCTGAAATATACCCACGGCTTTAGTCGTTTGACGCCGAGTGTTATTACTGTGACGGCGATGATTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAA", + "dna_sequence_length": 318, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_4069", + "location": [ + [ + "NC_000913", + 4376875, + "+", + 318 + ] + ], + "md5": "e956e44763758fad920361e85519308b", + "parent_gene": "", + "protein_md5": "4c57b23ab62f3064487d3fd7f5504aa8", + "protein_translation": "MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKLSTH", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013590" + ], + [ + "gene_synonym", + "ECK4145" + ], + [ + "gene_synonym", + "EcoGene:EG12474" + ], + [ + "gene_synonym", + "GI:16131974" + ], + [ + "gene_synonym", + "GeneID:948670" + ], + [ + "gene_synonym", + "JW4110" + ], + [ + "gene_synonym", + "NP_418573.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A901" + ], + [ + "gene_synonym", + "b4149" + ], + [ + "gene_synonym", + "blc" + ], + [ + "gene_synonym", + "yjeL" + ] + ], + "dna_sequence": "ATGCGCCTGCTCCCTCTCGTTGCCGCAGCGACAGCTGCATTTCTGGTCGTTGCCTGCAGTTCTCCTACGCCGCCGCGTGGCGTGACCGTAGTAAATAATTTCGACGCCAAACGTTATCTCGGTACCTGGTATGAGATTGCCCGTTTTGATCACCGCTTTGAACGTGGACTGGAAAAAGTCACCGCAACATACAGCCTGCGTGATGACGGCGGCCTGAATGTCATTAATAAAGGCTATAACCCTGACAGAGGAATGTGGCAGCAGAGTGAAGGGAAAGCGTACTTTACCGGCGCACCAACTCGCGCTGCGCTGAAAGTGTCATTCTTTGGTCCTTTCTATGGCGGTTATAACGTTATTGCACTCGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCTCCCGCACGCCAACCATTTCTGACGAAGTGAAACAGGAGATGCTGGCAGTCGCGACCCGGGAAGGGTTTGATGTCAGTAAATTTATTTGGGTACAGCAGCCTGGTAGTTAG", + "dna_sequence_length": 534, + "functions": [ + "outer membrane lipoprotein cell division and growth lipocalin" + ], + "id": "CDS_4070", + "location": [ + [ + "NC_000913", + 4377722, + "-", + 534 + ] + ], + "md5": "e52a1221f00eadec98de0944072d69e7", + "parent_gene": "", + "protein_md5": "37da452fa01d2c4364b959f431abd048", + "protein_translation": "MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPGS", + "protein_translation_length": 177, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013592" + ], + [ + "gene_synonym", + "ECK4146" + ], + [ + "gene_synonym", + "EcoGene:EG10040" + ], + [ + "gene_synonym", + "GI:16131975" + ], + [ + "gene_synonym", + "GeneID:948669" + ], + [ + "gene_synonym", + "JW4111" + ], + [ + "gene_synonym", + "NP_418574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00811" + ], + [ + "gene_synonym", + "ampA" + ], + [ + "gene_synonym", + "ampC" + ], + [ + "gene_synonym", + "b4150" + ] + ], + "dna_sequence": "ATGTTCAAAACGACGCTCTGCGCCTTATTAATTACCGCCTCTTGCTCCACATTTGCTGCCCCTCAACAAATCAACGATATTGTGCATCGCACAATTACCCCGCTTATAGAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATTTATCAGGGTAAACCTTATTACTTTACCTGGGGCTATGCGGACATCGCCAAAAAGCAGCCCGTCACACAGCAAACGTTGTTTGAGTTAGGTTCGGTCAGCAAAACATTTACTGGCGTGCTTGGTGGCGACGCTATTGCTCGAGGGGAAATCAAGTTAAGCGATCCCACAACAAAATACTGGCCTGAACTTACCGCTAAACAGTGGAATGGGATCACACTATTACATCTCGCAACCTACACTGCTGGCGGCCTGCCATTGCAGGTGCCGGATGAGGTGAAATCCTCAAGCGACTTGCTGCGCTTCTATCAAAACTGGCAGCCTGCATGGGCTCCAGGAACACAACGTCTGTATGCCAACTCCAGTATCGGTTTGTTCGGCGCACTGGCTGTGAAGCCGTCTGGTTTGAGTTTTGAGCAGGCGATGCAAACTCGTGTCTTCCAGCCACTCAAACTCAACCATACGTGGATTAATGTACCGCCCGCAGAAGAAAAGAATTACGCCTGGGGATATCGCGAAGGTAAGGCAGTGCATGTTTCGCCTGGGGCGTTAGATGCTGAAGCTTATGGTGTGAAGTCGACCATTGAAGATATGGCCCGCTGGGTGCAAAGCAATTTAAAACCCCTTGATATCAATGAGAAAACGCTTCAACAAGGGATACAACTGGCACAATCTCGCTACTGGCAAACCGGCGATATGTATCAGGGCCTGGGCTGGGAAATGCTGGACTGGCCGGTAAATCCTGACAGCATCATTAACGGCAGTGACAATAAAATTGCACTGGCAGCACGCCCCGTAAAAGCGATTACGCCCCCAACTCCTGCAGTACGCGCATCATGGGTACATAAAACAGGGGCGACCGGCGGATTTGGTAGCTATGTCGCGTTTATTCCAGAAAAAGAGCTGGGTATCGTGATGCTGGCAAACAAAAACTATCCCAATCCAGCGAGAGTCGACGCCGCCTGGCAGATTCTTAACGCTCTACAGTAA", + "dna_sequence_length": 1134, + "functions": [ + "penicillin-binding protein", + "beta-lactamase, intrinsically weak" + ], + "id": "CDS_4071", + "location": [ + [ + "NC_000913", + 4378944, + "-", + 1134 + ] + ], + "md5": "7b6da7d1e109306f34dfadea4e6a1c45", + "parent_gene": "", + "protein_md5": "0eccaf784fe93dfc9c1af8dd4a22bc94", + "protein_translation": "MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ", + "protein_translation_length": 377, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013595" + ], + [ + "gene_synonym", + "ECK4147" + ], + [ + "gene_synonym", + "EcoGene:EG10333" + ], + [ + "gene_synonym", + "GI:16131976" + ], + [ + "gene_synonym", + "GeneID:948668" + ], + [ + "gene_synonym", + "JW4112" + ], + [ + "gene_synonym", + "NP_418575.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Q3" + ], + [ + "gene_synonym", + "b4151" + ], + [ + "gene_synonym", + "frdD" + ] + ], + "dna_sequence": "ATGATTAATCCAAATCCAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCAGAGCTTCATTGGTCGCGTATTCCTGTTCCTGATGATCGTTCTGCCGCTGTGGTGTGGTTTACACCGTATGCACCACGCGATGCACGATCTGAAAATCCACGTACCTGCGGGCAAATGGGTTTTCTACGGTCTGGCTGCTATCCTGACAGTTGTCACGCTGATTGGTGTCGTTACAATCTAA", + "dna_sequence_length": 360, + "functions": [ + "fumarate reductase (anaerobic), membrane anchor subunit" + ], + "id": "CDS_4072", + "location": [ + [ + "NC_000913", + 4379366, + "-", + 360 + ] + ], + "md5": "b76a5f301abd1ab6fbf1ad36be473fcc", + "parent_gene": "", + "protein_md5": "b715da47d04f9735194c841a1b3d28d5", + "protein_translation": "MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013598" + ], + [ + "gene_synonym", + "ECK4148" + ], + [ + "gene_synonym", + "EcoGene:EG10332" + ], + [ + "gene_synonym", + "GI:16131977" + ], + [ + "gene_synonym", + "GeneID:948680" + ], + [ + "gene_synonym", + "JW4113" + ], + [ + "gene_synonym", + "NP_418576.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Q0" + ], + [ + "gene_synonym", + "b4152" + ], + [ + "gene_synonym", + "frdC" + ] + ], + "dna_sequence": "ATGACGACTAAACGTAAACCGTATGTACGGCCAATGACGTCCACCTGGTGGAAAAAATTGCCGTTTTATCGCTTTTACATGCTGCGCGAAGGCACGGCGGTTCCGGCTGTGTGGTTCAGCATTGAACTGATTTTCGGGCTGTTTGCCCTGAAAAATGGCCCGGAAGCCTGGGCGGGATTCGTCGACTTTTTACAAAACCCGGTTATCGTGATCATTAACCTGATCACTCTGGCGGCAGCTCTGCTGCACACCAAAACCTGGTTTGAACTGGCACCGAAAGCGGCCAATATCATTGTAAAAGACGAAAAAATGGGACCAGAGCCAATTATCAAAAGTCTCTGGGCGGTAACTGTGGTTGCCACCATCGTAATCCTGTTTGTTGCCCTGTACTGGTAA", + "dna_sequence_length": 396, + "functions": [ + "fumarate reductase (anaerobic), membrane anchor subunit" + ], + "id": "CDS_4073", + "location": [ + [ + "NC_000913", + 4379772, + "-", + 396 + ] + ], + "md5": "fd03d7359b2ae78e1bbed280884d3a8d", + "parent_gene": "", + "protein_md5": "7fd9360c2b37e65328cd3f220502fd9b", + "protein_translation": "MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVILFVALYW", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013602" + ], + [ + "gene_synonym", + "ECK4149" + ], + [ + "gene_synonym", + "EcoGene:EG10331" + ], + [ + "gene_synonym", + "GI:16131978" + ], + [ + "gene_synonym", + "GeneID:948666" + ], + [ + "gene_synonym", + "JW4114" + ], + [ + "gene_synonym", + "NP_418577.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC47" + ], + [ + "gene_synonym", + "b4153" + ], + [ + "gene_synonym", + "frdB" + ] + ], + "dna_sequence": "ATGGCTGAGATGAAAAACCTGAAAATTGAGGTGGTGCGCTATAACCCGGAAGTCGATACCGCACCGCATAGCGCATTCTATGAAGTGCCTTATGACGCAACTACCTCATTACTGGATGCGCTGGGCTACATCAAAGACAACCTGGCACCGGACCTGAGCTACCGCTGGTCCTGCCGTATGGCGATTTGTGGTTCCTGCGGCATGATGGTTAACAACGTGCCAAAACTGGCATGTAAAACCTTCCTGCGTGATTACACCGACGGTATGAAGGTTGAAGCGTTAGCTAACTTCCCGATTGAACGCGATCTGGTGGTCGATATGACCCACTTCATCGAAAGTCTGGAAGCGATCAAACCGTACATCATCGGCAACTCCCGCACCGCGGATCAGGGTACTAACATCCAGACCCCGGCGCAGATGGCGAAGTATCACCAGTTCTCCGGTTGCATCAACTGTGGTTTGTGCTACGCCGCGTGCCCGCAGTTTGGCCTGAACCCAGAGTTCATCGGTCCGGCTGCCATTACGCTGGCGCATCGTTATAACGAAGATAGCCGCGACCACGGTAAGAAGGAGCGTATGGCGCAGTTGAACAGCCAGAACGGCGTATGGAGCTGTACTTTCGTGGGCTACTGCTCCGAAGTCTGCCCGAAACACGTCGATCCGGCTGCGGCCATTCAGCAGGGCAAAGTAGAAAGTTCGAAAGACTTTCTTATCGCGACCCTGAAACCACGCTAA", + "dna_sequence_length": 735, + "functions": [ + "fumarate reductase (anaerobic), Fe-S subunit" + ], + "id": "CDS_4074", + "location": [ + [ + "NC_000913", + 4380517, + "-", + 735 + ] + ], + "md5": "3a709270b043d0c26a4014c31958c619", + "parent_gene": "", + "protein_md5": "052ebfac67626ca0f2c49ed489e6a56a", + "protein_translation": "MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013604" + ], + [ + "gene_synonym", + "ECK4150" + ], + [ + "gene_synonym", + "EcoGene:EG10330" + ], + [ + "gene_synonym", + "GI:16131979" + ], + [ + "gene_synonym", + "GeneID:948667" + ], + [ + "gene_synonym", + "JW4115" + ], + [ + "gene_synonym", + "NP_418578.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00363" + ], + [ + "gene_synonym", + "b4154" + ], + [ + "gene_synonym", + "frdA" + ] + ], + "dna_sequence": "GTGCAAACCTTTCAAGCCGATCTTGCCATTGTAGGCGCCGGTGGCGCGGGATTACGTGCTGCAATTGCTGCCGCGCAGGCAAATCCGAATGCAAAAATCGCACTAATCTCAAAAGTATACCCGATGCGTAGCCATACCGTTGCTGCAGAAGGGGGCTCCGCCGCTGTCGCGCAGGATCATGACAGCTTCGAATATCACTTTCACGATACAGTAGCGGGTGGCGACTGGTTGTGTGAGCAGGATGTCGTGGATTATTTCGTCCACCACTGCCCAACCGAAATGACCCAACTGGAACTGTGGGGATGCCCATGGAGCCGTCGCCCGGATGGTAGCGTCAACGTACGTCGCTTCGGCGGCATGAAAATCGAGCGCACCTGGTTCGCCGCCGATAAGACCGGCTTCCATATGCTGCACACGCTGTTCCAGACCTCTCTGCAATTCCCGCAGATCCAGCGTTTTGACGAACATTTCGTGCTGGATATTCTGGTTGATGATGGTCATGTTCGCGGCCTGGTAGCAATGAACATGATGGAAGGCACGCTGGTGCAGATCCGTGCTAACGCGGTCGTTATGGCTACTGGCGGTGCGGGTCGCGTTTATCGTTACAACACCAACGGCGGCATCGTTACCGGTGACGGTATGGGTATGGCGCTAAGCCACGGCGTTCCGCTGCGTGACATGGAATTCGTTCAGTATCACCCAACCGGTCTGCCAGGTTCCGGTATCCTGATGACCGAAGGTTGCCGCGGTGAAGGCGGTATTCTGGTCAACAAAAATGGCTACCGTTATCTGCAAGATTACGGCATGGGCCCGGAAACTCCGCTGGGCGAGCCGAAAAACAAATATATGGAACTGGGTCCACGCGACAAAGTCTCTCAGGCCTTCTGGCACGAATGGCGTAAAGGCAACACCATCTCCACGCCGCGTGGCGATGTGGTTTATCTCGACTTGCGTCACCTCGGCGAGAAAAAACTGCATGAACGTCTGCCGTTCATCTGCGAACTGGCGAAAGCGTACGTTGGCGTCGATCCGGTTAAAGAACCGATTCCGGTACGTCCGACCGCACACTACACCATGGGCGGTATCGAAACCGATCAGAACTGTGAAACCCGCATTAAAGGTCTGTTCGCCGTGGGTGAATGTTCCTCTGTTGGTCTGCACGGTGCAAACCGTCTGGGTTCTAACTCCCTGGCGGAACTGGTGGTCTTCGGCCGTCTGGCCGGTGAACAAGCGACAGAGCGTGCAGCAACTGCCGGTAATGGCAACGAAGCGGCAATTGAAGCGCAGGCAGCTGGCGTTGAACAACGTCTGAAAGATCTGGTTAACCAGGATGGCGGCGAAAACTGGGCGAAGATCCGCGACGAAATGGGCCTGGCTATGGAAGAAGGCTGCGGTATCTACCGTACGCCGGAACTGATGCAGAAAACCATCGACAAGCTGGCAGAGCTGCAGGAACGCTTCAAGCGCGTGCGCATCACCGACACTTCCAGCGTGTTCAACACCGACCTGCTCTACACCATTGAACTGGGCCACGGTCTGAACGTTGCTGAATGTATGGCGCACTCCGCAATGGCACGTAAAGAGTCCCGCGGCGCGCACCAGCGTCTGGACGAAGGTTGCACCGAGCGTGACGACGTCAACTTCCTCAAACACACCCTCGCCTTCCGCGATGCTGATGGCACGACTCGCCTGGAGTACAGCGACGTGAAGATTACTACGCTGCCGCCAGCTAAACGCGTTTACGGTGGCGAAGCGGATGCAGCCGATAAGGCGGAAGCAGCCAATAAGAAGGAGAAGGCGAATGGCTGA", + "dna_sequence_length": 1809, + "functions": [ + "anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit" + ], + "id": "CDS_4075", + "location": [ + [ + "NC_000913", + 4382318, + "-", + 1809 + ] + ], + "md5": "7e8fdb198c9bbb50f79fd2d9bd8ff18d", + "parent_gene": "", + "protein_md5": "0d2c0f1acdd08ab0157f2308531a58e4", + "protein_translation": "MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG", + "protein_translation_length": 602, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013610" + ], + [ + "gene_synonym", + "ECK4151" + ], + [ + "gene_synonym", + "EcoGene:EG11211" + ], + [ + "gene_synonym", + "GI:90111694" + ], + [ + "gene_synonym", + "GeneID:948672" + ], + [ + "gene_synonym", + "JW4116" + ], + [ + "gene_synonym", + "NP_418579.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8N7" + ], + [ + "gene_synonym", + "b4155" + ], + [ + "gene_synonym", + "epmA" + ], + [ + "gene_synonym", + "genX" + ], + [ + "gene_synonym", + "poxA" + ], + [ + "gene_synonym", + "yjeA" + ] + ], + "dna_sequence": "ATGAGCGAAACGGCATCCTGGCAGCCGAGCGCATCCATTCCTAACTTATTAAAACGCGCGGCGATTATGGCGGAGATCCGTCGTTTCTTTGCCGATCGTGGAGTGCTGGAGGTGGAGACGCCTTGTATGAGCCAGGCGACGGTAACCGATATTCATTTGGTCCCGTTTGAGACACGTTTCGTTGGCCCCGGGCATTCGCAGGGGATGAATCTCTGGTTAATGACCAGCCCGGAATACCATATGAAACGCCTGCTGGTTGCCGGTTGTGGGCCGGTATTCCAGCTGTGCCGCAGCTTCCGTAATGAAGAGATGGGGCGTTATCACAACCCTGAGTTCACTATGCTGGAGTGGTATCGACCGCACTATGATATGTACCGGTTGATGAACGAGGTGGACGATCTCTTACAACAGGTGCTGGACTGCCCGGCAGCAGAAAGCCTTTCTTATCAACAAGCTTTCTTGCGTTATCTGGAAATTGACCCGCTCTCTGCCGACAAAACGCAACTGCGGGAAGTCGCAGCGAAACTGGATTTGAGCAATGTTGCTGATACCGAAGAAGACCGCGACACGCTGCTACAATTGCTGTTTACCTTTGGCGTAGAGCCAAATATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCCTTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAA", + "dna_sequence_length": 978, + "functions": [ + "Elongation Factor P Lys34 lysyltransferase" + ], + "id": "CDS_4076", + "location": [ + [ + "NC_000913", + 4382643, + "+", + 978 + ] + ], + "md5": "805f0b0bc47f67ec6937d184cd43e511", + "parent_gene": "", + "protein_md5": "fe3f3fe9e9fd4a541905a78c2ba045f0", + "protein_translation": "MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA", + "protein_translation_length": 325, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013613" + ], + [ + "gene_synonym", + "ECK4152" + ], + [ + "gene_synonym", + "EcoGene:EG12475" + ], + [ + "gene_synonym", + "GI:90111695" + ], + [ + "gene_synonym", + "GeneID:948679" + ], + [ + "gene_synonym", + "JW5739" + ], + [ + "gene_synonym", + "NP_418580.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39282" + ], + [ + "gene_synonym", + "b4156" + ], + [ + "gene_synonym", + "yjeM" + ] + ], + "dna_sequence": "ATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTCAACATTCCTCTATGGTAGCGACATGACCCAGCACTGGCGTATTGCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTTGGTGGTCTGGTCGATAAAACGGAAAATCCAGAAAAGAACTTTGCCAAAGGTATTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGCTGGGCGTATGGTTTGCGCGTATTACTGGACTTTCGATGTTCCTCGCCTATACCGGTGCGTTCTTTACGCTTTGCTATTCACCGTTGAAAGCCATCATCCAGGGGACGCCGAAAGCATTGTGGCCGGAACCGATGACGCGCCTGAATGCGATGGGGATGCCGTCTATCGCCATGTGGATGCAGTGCGGGTTGGTTACTGTCTTCATCCTGCTGGTTTCGTTTGGTGGCGGTACCGCATCGGCGTTCTTTAACAAGCTGACGCTGATGGCGAACGTGTCTATGACGCTTCCTTACCTGTTCCTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAA", + "dna_sequence_length": 1503, + "functions": [ + "putative transporter" + ], + "id": "CDS_4077", + "location": [ + [ + "NC_000913", + 4383839, + "+", + 1503 + ] + ], + "md5": "bfe6a85188013e0daf59f469bd452be4", + "parent_gene": "", + "protein_md5": "b769f71fc2a0dea781692be3b2f8b79a", + "protein_translation": "MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGYSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAMIATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQWAVE", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013617" + ], + [ + "gene_synonym", + "ECK4153" + ], + [ + "gene_synonym", + "EcoGene:EG12476" + ], + [ + "gene_synonym", + "GI:16131982" + ], + [ + "gene_synonym", + "GeneID:948678" + ], + [ + "gene_synonym", + "JW4118" + ], + [ + "gene_synonym", + "NP_418581.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39283" + ], + [ + "gene_synonym", + "b4157" + ], + [ + "gene_synonym", + "yjeN" + ] + ], + "dna_sequence": "ATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCCACACCCGTAAAGTGGCGATGGTGGTGGGTAGCACCATTAACACCCTCAAAGATCGCGATGGTAAACGGTGGGGAAACCTGCCGGATATTTATTGCGCTTATCTTATCCGATGTCTGGTTTTTCGCGGGGAATTAGTGGGATACGGCGATTTGTTTCGTATGCGCTATAGCGAAATTAAGCGACCGGTTACCTTATGA", + "dna_sequence_length": 315, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4078", + "location": [ + [ + "NC_000913", + 4385393, + "+", + 315 + ] + ], + "md5": "d753dabf861da0a0e3fd4c7ff379e7d1", + "parent_gene": "", + "protein_md5": "a20ac7bdc3bd8d10fdca19a53866c7b4", + "protein_translation": "MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDGKRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013619" + ], + [ + "gene_synonym", + "ECK4154" + ], + [ + "gene_synonym", + "EcoGene:EG12477" + ], + [ + "gene_synonym", + "GI:16131983" + ], + [ + "gene_synonym", + "GeneID:948677" + ], + [ + "gene_synonym", + "JW4119" + ], + [ + "gene_synonym", + "NP_418582.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39284" + ], + [ + "gene_synonym", + "b4158" + ], + [ + "gene_synonym", + "yjeO" + ] + ], + "dna_sequence": "ATGAGTGCGCGCATGTTTGTCTTATGCTGCATCTGGTTTATTGTGGCGTTCCTCTGGATAACCATCACTTCCGCGCTGGACAAAGAGTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGA", + "dna_sequence_length": 315, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_4079", + "location": [ + [ + "NC_000913", + 4385704, + "+", + 315 + ] + ], + "md5": "50549ac60f218ce146bedd18ebc8494e", + "parent_gene": "", + "protein_md5": "a79f8c7aa6a157eb110797bca4970774", + "protein_translation": "MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013621" + ], + [ + "gene_synonym", + "ECK4155" + ], + [ + "gene_synonym", + "EcoGene:EG12478" + ], + [ + "gene_synonym", + "GI:16131984" + ], + [ + "gene_synonym", + "GeneID:948676" + ], + [ + "gene_synonym", + "JW4120" + ], + [ + "gene_synonym", + "NP_418583.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39285" + ], + [ + "gene_synonym", + "b4159" + ], + [ + "gene_synonym", + "mscM" + ], + [ + "gene_synonym", + "yjeP" + ] + ], + "dna_sequence": "GTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCCGATAGCAAACAAATCACTCAGGAACTGGAGCAGGCAAAAGCGGCGAAACCCGCACAGCCGGAAGTCGTAGAGGCGCTCCAGTCTGCCTTAAATGCGCTTGAGGAACGAAAAGGTTCCCTTGAGCGCATCAAACAATATCAGCAAGTTATCGATAATTATCCGAAACTCTCCGCTACTCTGCGCGCACAATTAAACAACATGCGTGACGAGCCGCGCAGCGTGTCGCCGGGAATGTCTACCGACGCGCTGAATCAGGAAATTCTCCAGGTCAGCAGCCAGTTGCTGGATAAAAGCCGTCAGGCCCAGCAAGAGCAGGAGCGCGCCCGCGAGATTGCCGATTCGCTGAATCAACTGCCGCAACAGCAAACCGACGCCCGCCGTCAGTTAAATGAGATCGAGCGCCGCCTGGGAACGCTTACCGGCAATACTCCGCTCAATCAGGCACAAAATTTCGCGTTGCAGTCTGACTCTGCACGTCTTAAGGCGCTCGTTGATGAACTGGAGCTGGCGCAGCTGTCTGCCAATAACCGCCAGGAATTAGCGCGCTTACGCTCAGAGCTGGCGGAAAAAGAGAGCCAGCAACTGGATGCGTATTTGCAGGCCTTGCGTAATCAATTAAACAGCCAACGTCAGCTTGAGGCGGAGCGGGCGCTGGAAAGTACCGAATTGCTGGCAGAAAACAGCGCCGATTTGCCGAAAGATATCGTCGCGCAATTCAAAATTAACCGCGAACTATCGGCGGCTTTGAATCAACAGGCGCAGCGGATGGATCTCGTTGCCTCGCAACAGCGTCAGGCTGCCAGCCAGACGTTACAGGTCCGGCAGGCGTTGAATACGCTGCGTGAACAGTCGCAATGGCTGGGATCGTCCAATCTGCTCGGCGAAGCGCTGCGGGCGCAGGTGGCACGGCTGCCGGAAATGCCGAAACCACAACAGCTTGATACCGAAATGGCGCAGTTGCGTGTGCAACGGTTACGTTATGAGGATCTGCTTAATAAACAGCCGCTGCTACGGCAAATTCATCAGGCCGACGGTCAGCCGCTGACTGCCGAGCAAAACCGTATTCTGGAAGCACAACTGCGCACTCAGCGTGAGTTGCTGAACTCATTGTTGCAGGGTGGCGACACGCTACTATTGGAACTGACCAAGCTGAAAGTCTCCAACGGGCAACTGGAGGATGCGCTGAAAGAGGTGAACGAAGCAACGCACCGCTATCTGTTCTGGACCTCTGACGTGCGCCCGATGACCATCGCCTGGCCGCTGGAAATCGCCCAGGATCTGCGTCGTCTCATTTCGCTGGACACCTTCAGTCAGTTGGGCAAAGCCAGTGTGATGATGCTGACCAGCAAAGAGACAATTTTGCCGCTGTTTGGCGCGTTGATTCTGGTCGGTTGCAGTATTTACTCGCGCCGCTATTTCACCCGTTTTCTTGAACGTTCGGCGGCGAAAGTTGGCAAAGTGACTCAGGATCACTTCTGGCTGACGTTGCGCACTCTTTTCTGGTCGATTCTCGTCGCGTCACCGTTACCGGTGCTGTGGATGACGCTGGGTTACGGCTTGCGCGAGGCGTGGCCTTATCCGCTGGCGGTCGCGATTGGCGATGGTGTAACGGCCACCGTGCCGCTGCTGTGGGTAGTGATGATTTGCGCCACCTTTGCCCGCCCGAACGGCTTGTTTATCGCTCATTTTGGCTGGCCGCGCGAACGTGTTTCCCGTGGGATGCGCTACTACCTGATGAGCATCGGGCTTATTGTGCCGCTGATTATGGCGCTGATGATGTTCGATAACCTCGACGACCGTGAATTCTCCGGTTCGCTGGGACGGCTTTGCTTTATCCTCATTTGCGGTGCGCTGGCGGTGGTCACCCTCAGCCTGAAAAAGGCCGGGATTCCGCTGTATCTCAACAAAGAGGGCAGCGGCGACAACATTACCAACCATATGCTGTGGAACATGATGATTGGCGCGCCGTTGGTTGCCATTCTGGCGTCGGCGGTGGGTTATCTGGCAACGGCACAGGCGCTGTTAGCGAGGCTTGAAACCTCGGTTGCCATCTGGTTCCTGCTACTGGTGGTTTATCACGTTATCCGCCGCTGGATGCTGATCCAGCGCCGCAGGCTGGCGTTTGATCGGGCGAAGCATCGCCGGGCAGAGATGTTAGCGCAACGTGCGCGTGGCGAAGAGGAAGCGCATCATCACAGTAGCCCGGAAGGAGCAATTGAAGTCGATGAAAGCGAAGTCGATCTCGATGCCATCAGTGCGCAATCCTTGCGGCTGGTGCGCTCAATTTTGATGTTGATCGCCCTGCTTTCTGTCATTGTGCTGTGGTCAGAAATCCATTCCGCTTTCGGCTTCCTCGAAAATATTTCGCTGTGGGATGTCACCTCCACGGTACAGGGCGTAGAAAGTCTGGAGCCAATTACCCTCGGTGCGGTGCTGATTGCCATTCTGGTGTTTATCATCACCACGCAGCTGGTGCGCAACTTGCCCGCGCTGCTGGAACTGGCGATTTTGCAGCACCTGGATTTAACGCCGGGTACGGGTTACGCCATCACCACCATCACCAAATATCTGCTGATGCTGATTGGCGGGCTGGTCGGCTTCTCAATGATTGGTATTGAGTGGTCGAAATTGCAGTGGCTGGTTGCCGCGCTCGGTGTTGGTCTCGGTTTTGGTTTGCAGGAAATTTTCGCCAACTTTATCTCTGGTCTGATTATCCTGTTCGAAAAACCGATTCGCATTGGCGATACGGTGACAATTCGCGATCTCACCGGTAGCGTGACGAAAATTAACACCCGCGCCACCACCATCAGCGACTGGGACCGTAAAGAGATAATCGTGCCGAACAAGGCGTTTATTACCGAGCAGTTTATCAACTGGTCGCTCTCTGACTCGGTCACGCGCGTGGTGTTGACGATACCGGCCCCTGCCGATGCCAATAGCGAAGAAGTGACGGAAATCCTGCTCACCGCAGCGCGTCGCTGCTCGCTGGTGATCGACAACCCGGCACCGGAAGTCTTCCTGGTGGATCTGCAACAGGGGATTCAGATTTTCGAGCTGCGTATTTACGCCGCTGAGATGGGTCACCGTATGCCGCTACGCCATGAGATCCACCAGCTGATTCTGGCTGGCTTCCATGCCCACGGTATCGATATGCCATTCCCGCCCTTCCAGATGCGTCTGGAAAGCCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAA", + "dna_sequence_length": 3324, + "functions": [ + "mechanosensitive channel protein, miniconductance" + ], + "id": "CDS_4080", + "location": [ + [ + "NC_000913", + 4389370, + "-", + 3324 + ] + ], + "md5": "ca481fc925323cbc228e19b464e57cdf", + "parent_gene": "", + "protein_md5": "0a78de332bb26974b13135536d6237af", + "protein_translation": "MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPEVVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSTDALNQEILQVSSQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNGKQTGRTLTSAGKGRQAGSL", + "protein_translation_length": 1107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013623" + ], + [ + "gene_synonym", + "ECK4156" + ], + [ + "gene_synonym", + "EcoGene:EG10775" + ], + [ + "gene_synonym", + "GI:16131985" + ], + [ + "gene_synonym", + "GeneID:948673" + ], + [ + "gene_synonym", + "JW4121" + ], + [ + "gene_synonym", + "NP_418584.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8K1" + ], + [ + "gene_synonym", + "b4160" + ], + [ + "gene_synonym", + "psd" + ] + ], + "dna_sequence": "TTGTTAAATTCATTTAAACTTTCGCTACAGTACATTCTGCCGAAACTATGGCTTACTCGCCTGGCGGGTTGGGGCGCAAGCAAGCGGGCAGGATGGCTGACAAAACTGGTTATCGATCTGTTCGTTAAATACTACAAGGTCGACATGAAAGAGGCGCAAAAGCCGGACACCGCCAGCTACCGCACCTTTAACGAATTCTTTGTCCGTCCGCTGCGTGACGAAGTACGCCCAATCGATACCGATCCGAATGTACTGGTCATGCCTGCCGATGGCGTTATCAGCCAGTTGGGTAAAATCGAAGAAGATAAAATCCTGCAAGCCAAAGGCCACAACTACAGCCTCGAAGCCCTGCTGGCAGGCAACTATCTGATGGCGGACCTGTTCCGCAACGGTACGTTTGTGACCACTTACCTCTCCCCGCGTGACTACCACCGCGTACACATGCCGTGCAACGGTATTCTGCGTGAGATGATCTACGTGCCGGGCGATCTCTTCTCCGTTAACCATCTCACGGCTCAGAACGTGCCGAATCTGTTTGCCCGTAACGAACGCGTGATTTGCCTTTTCGATACCGAATTTGGCCCAATGGCGCAGATTCTGGTCGGAGCGACGATTGTTGGCAGCATTGAGACGGTCTGGGCGGGCACCATTACGCCGCCGCGCGAAGGTATCATCAAGCGCTGGACCTGGCCTGCCGGGGAAAACGACGGTTCTGTGGCACTGCTGAAAGGCCAGGAAATGGGTCGCTTTAAACTCGGTTCCACCGTTATCAACCTGTTTGCACCGGGTAAAGTGAATCTGGTTGAGCAACTGGAAAGCCTGTCTGTCACGAAAATTGGCCAGCCGCTGGCAGTATCTACCGAAACCTTTGTTACGCCAGACGCTGAACCTGCCCCGCTTCCTGCTGAAGAGATCGAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAA", + "dna_sequence_length": 969, + "functions": [ + "phosphatidylserine decarboxylase" + ], + "id": "CDS_4081", + "location": [ + [ + "NC_000913", + 4390360, + "-", + 969 + ] + ], + "md5": "98c1148ccf2bbd4f70fc15c6de6b032f", + "parent_gene": "", + "protein_md5": "297b16b3d36ecef02c62a833d52030ad", + "protein_translation": "MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV", + "protein_translation_length": 322, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013626" + ], + [ + "gene_synonym", + "ECK4157" + ], + [ + "gene_synonym", + "EcoGene:EG12479" + ], + [ + "gene_synonym", + "GI:90111696" + ], + [ + "gene_synonym", + "GeneID:948674" + ], + [ + "gene_synonym", + "JW4122" + ], + [ + "gene_synonym", + "NP_418585.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39286" + ], + [ + "gene_synonym", + "b4161" + ], + [ + "gene_synonym", + "engC" + ], + [ + "gene_synonym", + "rsgA" + ], + [ + "gene_synonym", + "yjeQ" + ] + ], + "dna_sequence": "TTGAGTAAAAATAAACTCTCCAAAGGCCAGCAGCGCCGCGTGAACGCCAATCACCAGCGTCGTCTTAAAACGTCTAAGGAGAAGCCCGACTACGACGACAATCTGTTTGGCGAGCCTGATGAAGGTATCGTCATCAGCCGCTTTGGTATGCACGCTGATGTGGAATCCGCCGATGGCGACGTTCACCGCTGCAATATTCGCCGTACCATCCGTTCGCTGGTAACCGGCGACCGCGTAGTCTGGCGTCCGGGTAAACCGGCGGCGGAAGGCGTAAATGTCAAAGGGATCGTGGAAGCGGTGCATGAGCGTACCTCGGTGTTGACGCGTCCGGATTTCTACGACGGCGTAAAACCTATTGCCGCCAACATCGACCAGATTGTCATTGTCTCCGCCATTTTGCCGGAGCTGTCGCTCAATATTATCGACCGTTACCTGGTGGCCTGCGAAACCTTGCAGATTGAGCCGATTATTGTGCTCAACAAGATAGACCTGCTGGACGACGAAGGCATGGCGTTCGTCAACGAGCAGATGGATATCTACCGCAATATCGGTTATCGCGTATTGATGGTTTCCAGCCATACTCAGGATGGGCTAAAACCGCTGGAAGAGGCGTTGACCGGGCGCATCAGCATTTTTGCCGGGCAGTCTGGCGTCGGCAAATCCAGCCTGCTGAATGCGTTGCTGGGGCTGCAAAAAGAGATCCTGACCAACGATATCTCTGACAACTCGGGGCTCGGTCAGCACACCACGACCGCCGCTCGGCTGTATCACTTCCCGCACGGCGGTGATGTGATTGACTCCCCAGGAGTGCGTGAGTTCGGCCTCTGGCACCTGGAGCCGGAACAAATCACTCAGGGCTTTGTCGAATTCCATGACTATTTAGGTCTGTGTAAATATCGCGATTGCAAACACGATACCGATCCGGGCTGCGCTATCCGGGAAGCGGTTGAGGAAGGGAAAATCGCGGAAACCCGTTTCGAAAACTATCACCGTATTCTGGAAAGCATGGCGCAGGTAAAAACGCGTAAAAACTTTTCTGATACGGATGACTGA", + "dna_sequence_length": 1053, + "functions": [ + "ribosome small subunit-dependent GTPase A" + ], + "id": "CDS_4082", + "location": [ + [ + "NC_000913", + 4391509, + "-", + 1053 + ] + ], + "md5": "b258a25d34d070955b2f8580609e07b5", + "parent_gene": "", + "protein_md5": "ee987380464b011586c4911576560dd8", + "protein_translation": "MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD", + "protein_translation_length": 350, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013631" + ], + [ + "gene_synonym", + "ECK4158" + ], + [ + "gene_synonym", + "EcoGene:EG12480" + ], + [ + "gene_synonym", + "GI:90111697" + ], + [ + "gene_synonym", + "GeneID:948675" + ], + [ + "gene_synonym", + "JW5740" + ], + [ + "gene_synonym", + "NP_418586.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A784" + ], + [ + "gene_synonym", + "b4162" + ], + [ + "gene_synonym", + "orn" + ], + [ + "gene_synonym", + "yjeR" + ] + ], + "dna_sequence": "ATGAGTGCCAATGAAAACAACCTGATTTGGATCGATCTTGAGATGACCGGTCTGGATCCCGAGCGCGATCGCATTATTGAGATTGCCACGCTGGTGACCGATGCCAACCTGAATATTCTGGCAGAAGGGCCGACCATTGCAGTACACCAGTCTGATGAACAGCTGGCGCTGATGGATGACTGGAACGTGCGCACCCATACCGCCAGCGGGCTGGTAGAGCGCGTGAAAGCGAGCACGATGGGCGATCGGGAAGCTGAACTGGCAACGCTCGAATTTTTAAAACAGTGGGTGCCTGCGGGAAAATCGCCGATTTGCGGTAACAGCATCGGTCAGGACCGTCGTTTCCTGTTTAAATACATGCCGGAGCTGGAAGCCTACTTCCACTACCGTTATCTCGATGTCAGCACCCTGAAAGAGCTGGCGCGCCGCTGGAAGCCGGAAATTCTGGATGGTTTTACCAAGCAGGGGACGCATCAGGCGATGGATGATATCCGTGAATCGGTGGCGGAGCTGGCTTACTACCGCGAGCATTTTATCAAGCTGTAA", + "dna_sequence_length": 546, + "functions": [ + "oligoribonuclease" + ], + "id": "CDS_4083", + "location": [ + [ + "NC_000913", + 4391604, + "+", + 546 + ] + ], + "md5": "d56396b08af9a72a646f7271306f199d", + "parent_gene": "", + "protein_md5": "cc0fe12bf30642df7d3d635784fe57c9", + "protein_translation": "MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4485" + ], + [ + "gene_synonym", + "EcoGene:EG14475" + ], + [ + "gene_synonym", + "GI:226524762" + ], + [ + "gene_synonym", + "GeneID:7751630" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P621" + ], + [ + "gene_synonym", + "YP_002791261.1" + ], + [ + "gene_synonym", + "b4670" + ], + [ + "gene_synonym", + "yjeV" + ] + ], + "dna_sequence": "ATGCGTTTTTATTTTTATTCACAAGCTGTGGATGAATCAGGCGTCACGCGGTAA", + "dna_sequence_length": 54, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4084", + "location": [ + [ + "NC_000913", + 4392892, + "+", + 54 + ] + ], + "md5": "d78c366718e1c8ab2ad84d70e1028c26", + "parent_gene": "", + "protein_md5": "6d0e298b06d973e174019465f1130549", + "protein_translation": "MRFYFYSQAVDESGVTR", + "protein_translation_length": 17, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013641" + ], + [ + "gene_synonym", + "ECK4162" + ], + [ + "gene_synonym", + "EcoGene:EG12481" + ], + [ + "gene_synonym", + "GI:16131988" + ], + [ + "gene_synonym", + "GeneID:948686" + ], + [ + "gene_synonym", + "JW4124" + ], + [ + "gene_synonym", + "NP_418587.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39288" + ], + [ + "gene_synonym", + "b4166" + ], + [ + "gene_synonym", + "queG" + ], + [ + "gene_synonym", + "yjeS" + ] + ], + "dna_sequence": "ATGTCAGAGCCCCTCGATCTCAATCAGTTAGCGCAAAAAATTAAACAGTGGGGGCTGGAACTGGGCTTTCAGCAGGTAGGTATTACCGATACCGATCTCAGCGAGTCCGAGCCCAAACTGCAAGCATGGCTGGACAAACAATACCACGGCGAAATGGACTGGATGGCACGTCACGGTATGCTGCGCGCTCGCCCTCATGAGTTATTGCCCGGTACGCTGCGCGTGATCAGCGTGCGGATGAATTACCTTCCTGCTAACGCCGCATTTGCCAGCACGCTGAAAAACCCCAAACTCGGCTATGTTAGCCGTTATGCGCTGGGCCGTGACTATCACAAACTTCTGCGCAACCGACTCAAAAAGCTGGGCGAGATGATTCAGCAACATTGTGTTTCGCTGAATTTTAGACCGTTTGTCGATTCTGCGCCTATTCTCGAGCGCCCGTTAGCTGAAAAAGCTGGGCTCGGCTGGACAGGTAAGCACTCACTTATCCTCAATCGCGAGGCCGGTTCGTTCTTCTTTTTAGGCGAATTGCTGGTCGATATTCCGCTGCCCGTGGATCAACCAGTCGAGGAAGGATGCGGCAAATGCGTGGCCTGTATGACGATTTGCCCGACCGGTGCCATCGTCGAGCCATATACCGTCGATGCTCGCCGCTGTATCTCTTATCTCACCATCGAACTTGAAGGGGCGATCCCGGAAGAGTTGCGACCGTTAATGGGAAACCGTATTTACGGTTGCGATGACTGCCAGCTTATCTGCCCGTGGAATCGCTATTCACAACTCACCACAGAAGAGGATTTCAGCCCGCGTAAGCCGCTACACGCACCGGAACTCATTGAGTTATTCGCCTGGAGCGAAGAGAAGTTTTTAAAAGTCACGGAAGGATCGGCGATTCGTCGTATTGGTCACCTGCGTTGGCTGCGTAATATCGCCGTAGCATTAGGCAATGCCCCTTGGGATGAAACGATTTTGACAGCGCTGGAAAGTCGTAAAGGTGAGCACCCACTTCTCGATGAGCACATAGCGTGGGCGATTGCGCAGCAAATAGAGAGACGAAATGCGTGCATAGTCGAAGTGCAATTGCCGAAAAAACAGCGTCTGGTTCGGGTGATTGAAAAAGGGTTACCGCGTGACGCCTGA", + "dna_sequence_length": 1140, + "functions": [ + "epoxyqueuosine reductase, cobalamine-stimulated", + "queosine biosynthesis" + ], + "id": "CDS_4085", + "location": [ + [ + "NC_000913", + 4394067, + "-", + 1140 + ] + ], + "md5": "242610ecc7f4e8cb330b6d3372bf885f", + "parent_gene": "", + "protein_md5": "ddc1d6bb3e5a128d2b03981dca1be080", + "protein_translation": "MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA", + "protein_translation_length": 379, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013644" + ], + [ + "gene_synonym", + "ECK4163" + ], + [ + "gene_synonym", + "EcoGene:EG11758" + ], + [ + "gene_synonym", + "GI:16131989" + ], + [ + "gene_synonym", + "GeneID:948685" + ], + [ + "gene_synonym", + "JW4125" + ], + [ + "gene_synonym", + "NP_418588.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31806" + ], + [ + "gene_synonym", + "b4167" + ], + [ + "gene_synonym", + "nnr" + ], + [ + "gene_synonym", + "yjeF" + ] + ], + "dna_sequence": "ATGACGGACCATACAATGAAGAAAAACCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTGTGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGCGATGGCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGCGACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGTCTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGATTGTGGCGGTTGATATCCCTTCCGGCCTGCTGGCTGAAACTGGCGCTACGCCAGGCGCGGTGATCAACGCCGATCACACCATCACTTTTATTGCGCTGAAACCAGGCTTGCTCACTGGAAAAGCGCGGGATGTTACCGGACAACTGCATTTTGACTCACTGGGGCTGGATAGTTGGCTGGCAGGTCAGGAGACGAAAATTCAGCGGTTTTCAGCAGAACAACTTTCTCACTGGCTAAAACCGCGTCGCCCGACTTCGCATAAAGGCGATCACGGGCGGCTGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGACCCGCAGTGAAAACATTGCGCCGCTGCTGACTGCACGACCGGAATTGATGGTGCATGAACTGACGATGGACTCTCTTACCGAAAGCCTGGAATGGGCCGATGTGGTGGTGATTGGTCCCGGTCTGGGCCAGCAAGAGTGGGGGAAAAAAGCACTGCAAAAAGTTGAGAATTTTCGCAAACCGATGTTGTGGGATGCCGATGCATTGAACCTGCTGGCAATCAATCCCGATAAGCGTCACAATCGCGTGATCACGCCGCATCCTGGCGAGGCCGCACGGTTGTTAGGCTGTTCCGTCGCTGAAATTGAAAGTGACCGCTTACATTGCGCCAAACGTCTGGTACAACGTTATGGCGGCGTAGCGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCGGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTCGCGCACGGTGCGGCAGCTGACGTACTGGCGGCGCGTTTTGGAACGCGCGGGATGCTGGCAACCGATCTCTTTTCCACGCTACAGCGTATTGTTAACCCGGAAGTGACTGATAAAAACCATGATGAATCGAGTAATTCCGCTCCCTGA", + "dna_sequence_length": 1548, + "functions": [ + "bifunctional NAD(P)H-hydrate repair enzyme", + "C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase" + ], + "id": "CDS_4086", + "location": [ + [ + "NC_000913", + 4394066, + "+", + 1548 + ] + ], + "md5": "8856219c57b3f5ff210a81396600c27e", + "parent_gene": "", + "protein_md5": "132ab4cc017bcccd2caabbb854d9d08f", + "protein_translation": "MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLLAQESDKPLPEEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP", + "protein_translation_length": 515, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013649" + ], + [ + "gene_synonym", + "ECK4164" + ], + [ + "gene_synonym", + "EcoGene:EG11757" + ], + [ + "gene_synonym", + "GI:16131990" + ], + [ + "gene_synonym", + "GeneID:948684" + ], + [ + "gene_synonym", + "JW4126" + ], + [ + "gene_synonym", + "NP_418589.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF67" + ], + [ + "gene_synonym", + "b4168" + ], + [ + "gene_synonym", + "tsaE" + ], + [ + "gene_synonym", + "yjeE" + ] + ], + "dna_sequence": "ATGATGAATCGAGTAATTCCGCTCCCTGATGAGCAGGCAACATTAGACCTGGGCGAGCGGGTAGCGAAAGCCTGCGATGGCGCAACCGTAATCTATCTGTATGGCGATTTAGGCGCAGGTAAAACCACCTTTAGCCGGGGCTTTTTACAGGCTCTGGGTCATCAGGGTAATGTCAAAAGCCCCACTTATACGCTGGTCGAACCCTATACGCTCGACAACTTAATGGTCTATCACTTTGATTTGTACCGCCTTGCCGATCCCGAGGAGCTGGAGTTTATGGGGATCCGCGATTATTTTGCCAACGATGCCATCTGCCTGGTGGAGTGGCCACAACAAGGTACAGGTGTTCTTCCTGACCCGGATGTCGAAATACACATTGATTATCAGGCACAAGGCCGTGAGGCGCGCGTGAGTGCGGTTTCCTCTGCGGGTGAATTGTTGCTGGCGCGTTTAGCCGGTTAA", + "dna_sequence_length": 462, + "functions": [ + "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein", + "ADP binding protein" + ], + "id": "CDS_4087", + "location": [ + [ + "NC_000913", + 4395585, + "+", + 462 + ] + ], + "md5": "d6b808825e5f7eb9b12634b214799cd7", + "parent_gene": "", + "protein_md5": "3cf4551f131dd653f0227023b6c1c1fb", + "protein_translation": "MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013653" + ], + [ + "gene_synonym", + "ECK4165" + ], + [ + "gene_synonym", + "EcoGene:EG11363" + ], + [ + "gene_synonym", + "GI:16131991" + ], + [ + "gene_synonym", + "GeneID:948683" + ], + [ + "gene_synonym", + "JW4127" + ], + [ + "gene_synonym", + "NP_418590.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26365" + ], + [ + "gene_synonym", + "amiB" + ], + [ + "gene_synonym", + "b4169" + ], + [ + "gene_synonym", + "yjeD" + ] + ], + "dna_sequence": "ATGATGTATCGCATCAGAAATTGGTTGGTAGCGACGCTGCTGCTGCTGTGCACGCCGGTGGGTGCCGCGACGCTCTCTGATATTCAGGTTTCTAACGGTAATCAACAGGCGCGGATAACGTTGAGTTTTATTGGCGATCCTGATTATGCGTTTAGCCATCAAAGCAAACGCACCGTGGCGCTCGATATCAAACAAACGGGCGTGATTCAGGGACTGCCGTTGTTGTTCAGCGGCAATAATCTGGTGAAGGCGATTCGCTCTGGAACGCCTAAAGATGCACAAACGCTACGGCTGGTGGTCGATCTTACCGAAAACGGTAAAACCGAAGCGGTGAAGCGGCAGAATGGCAGCAATTACACTGTCGTCTTTACGATTAACGCCGATGTGCCGCCACCGCCTCCTCCGCCGCCCGTGGTTGCGAAACGCGTTGAAACGCCTGCGGTTGTCGCACCGCGCGTCAGCGAACCGGCGCGCAATCCGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGCTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAA", + "dna_sequence_length": 1338, + "functions": [ + "N-acetylmuramoyl-l-alanine amidase II" + ], + "id": "CDS_4088", + "location": [ + [ + "NC_000913", + 4396065, + "+", + 1338 + ] + ], + "md5": "2ffbe445474b8696f39ee25cdba4d296", + "parent_gene": "", + "protein_md5": "ca4025de90ee665fa1d45ae7c956e46e", + "protein_translation": "MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFIGDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN", + "protein_translation_length": 445, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013655" + ], + [ + "gene_synonym", + "ECK4166" + ], + [ + "gene_synonym", + "EcoGene:EG11281" + ], + [ + "gene_synonym", + "GI:16131992" + ], + [ + "gene_synonym", + "GeneID:948691" + ], + [ + "gene_synonym", + "JW4128" + ], + [ + "gene_synonym", + "NP_418591.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23367" + ], + [ + "gene_synonym", + "b4170" + ], + [ + "gene_synonym", + "mutL" + ] + ], + "dna_sequence": "ATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTGACGGTAAAACCGGCGGCGCATCCTGTGGGGACGACGCTGGAGGTGCTGGATCTGTTCTACAACACCCCGGCGCGGCGCAAATTCCTGCGCACCGAGAAAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCAGCAACCGGCATTTGTGTTGTATCTGGAGATCGACCCACATCAGGTGGACGTCAACGTGCACCCCGCCAAACACGAAGTGCGTTTCCATCAGTCGCGTCTGGTGCATGATTTTATCTATCAGGGCGTGCTGAGCGTGCTACAACAGCAACTGGAAACGCCGCTACCGCTGGACGATGAACCCCAACCTGCACCGCGTTCCATTCCGGAAAACCGCGTGGCGGCGGGGCGCAATCACTTTGCAGAACCGGCAGCTCGTGAGCCGGTAGCTCCGCGCTACACTCCTGCGCCAGCATCAGGCAGTCGTCCGGCTGCCCCCTGGCCGAATGCGCAGCCAGGCTACCAGAAACAGCAAGGTGAAGTGTATCGCCAGCTTTTGCAAACGCCCGCGCCGATGCAAAAATTAAAAGCGCCGGAACCGCAGGAACCTGCACTTGCGGCGAACAGTCAGAGTTTTGGTCGGGTACTGACTATCGTCCATTCCGACTGTGCGTTGCTGGAGCGCGACGGCAACATTTCACTTTTATCCTTGCCAGTGGCAGAACGTTGGCTGCGTCAGGCACAATTGACGCCGGGTGAAGCGCCCGTTTGCGCCCAGCCGCTGCTGATTCCGTTGCGGCTAAAAGTTTCTGCCGAAGAAAAATCGGCATTAGAAAAAGCGCAGTCTGCCCTGGCGGAATTGGGTATTGATTTCCAGTCAGATGCACAGCATGTGACCATCAGGGCAGTGCCTTTACCCTTACGCCAACAAAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCTGCTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGA", + "dna_sequence_length": 1848, + "functions": [ + "methyl-directed mismatch repair protein" + ], + "id": "CDS_4089", + "location": [ + [ + "NC_000913", + 4397412, + "+", + 1848 + ] + ], + "md5": "601a0e807dd8f75f22d3283c61c750ee", + "parent_gene": "", + "protein_md5": "cc0b2101ac2383888b6f2403b33495c2", + "protein_translation": "MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEAPVCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE", + "protein_translation_length": 615, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013657" + ], + [ + "gene_synonym", + "ECK4167" + ], + [ + "gene_synonym", + "EcoGene:EG10595" + ], + [ + "gene_synonym", + "GI:16131993" + ], + [ + "gene_synonym", + "GeneID:948690" + ], + [ + "gene_synonym", + "JW4129" + ], + [ + "gene_synonym", + "NP_418592.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16384" + ], + [ + "gene_synonym", + "b4171" + ], + [ + "gene_synonym", + "miaA" + ], + [ + "gene_synonym", + "trpX" + ] + ], + "dna_sequence": "ATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTTGATGGGGCCGACGGCCTCCGGTAAAACGGCGTTAGCCATTGAGCTGCGTAAAATTTTACCAGTAGAGTTGATAAGCGTTGATTCTGCCCTTATTTACAAAGGGATGGATATCGGGACGGCGAAGCCGAACGCTGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTATTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGCGAAATCTCATACGATGAAATGGTTTATCGAGGTGTTTGCGCCACGAGACAGTTGGCGAAGCGGCAGATAACCTGGCTGCGTGGTTGGGAAGGGGTTCACTGGCTTGACAGTGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGA", + "dna_sequence_length": 951, + "functions": [ + "delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase" + ], + "id": "CDS_4090", + "location": [ + [ + "NC_000913", + 4399252, + "+", + 951 + ] + ], + "md5": "0c70c58555c861eb296e8d868ffc88e2", + "parent_gene": "", + "protein_md5": "8e358f58a28e9ec776e56694d4714216", + "protein_translation": "MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013659" + ], + [ + "gene_synonym", + "ECK4168" + ], + [ + "gene_synonym", + "EcoGene:EG10438" + ], + [ + "gene_synonym", + "GI:16131994" + ], + [ + "gene_synonym", + "GeneID:948689" + ], + [ + "gene_synonym", + "JW4130" + ], + [ + "gene_synonym", + "NP_418593.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6X3" + ], + [ + "gene_synonym", + "b4172" + ], + [ + "gene_synonym", + "hfq" + ] + ], + "dna_sequence": "ATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACTGTTGTCCCGTCTCGCCCGGTTTCTCATCACAGTAACAACGCCGGTGGCGGTACCAGCAGTAACTACCATCATGGTAGCAGCGCGCAGAATACTTCCGCGCAACAGGACAGCGAAGAAACCGAATAA", + "dna_sequence_length": 309, + "functions": [ + "global sRNA chaperone", + "HF-I, host factor for RNA phage Q beta replication" + ], + "id": "CDS_4091", + "location": [ + [ + "NC_000913", + 4400288, + "+", + 309 + ] + ], + "md5": "e3213af0a92e9c6f8caa878a080c30e1", + "parent_gene": "", + "protein_md5": "fe3e07d970ca830a34d91a3fa7e4f9e2", + "protein_translation": "MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE", + "protein_translation_length": 102, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013661" + ], + [ + "gene_synonym", + "ECK4169" + ], + [ + "gene_synonym", + "EcoGene:EG10437" + ], + [ + "gene_synonym", + "GI:16131995" + ], + [ + "gene_synonym", + "GeneID:948688" + ], + [ + "gene_synonym", + "JW4131" + ], + [ + "gene_synonym", + "NP_418594.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25519" + ], + [ + "gene_synonym", + "b4173" + ], + [ + "gene_synonym", + "hflA" + ], + [ + "gene_synonym", + "hflX" + ], + [ + "gene_synonym", + "hslX" + ] + ], + "dna_sequence": "TTGTTTGACCGTTATGATGCTGGTGAGCAGGCGGTACTGGTACACATCTATTTTACGCAAGACAAAGATATGGAAGACCTCCAGGAGTTTGAATCTCTGGTCTCTTCCGCCGGTGTCGAAGCATTGCAGGTGATTACCGGTAGCCGTAAAGCGCCGCACCCAAAGTATTTTGTAGGTGAAGGTAAAGCAGTTGAAATTGCGGAAGCTGTCAAAGCGACGGGTGCTTCGGTCGTTCTTTTTGACCATGCCCTGAGCCCGGCGCAAGAGCGTAACCTGGAGCGTTTGTGCGAGTGTCGTGTTATCGACCGCACCGGCCTTATTTTAGATATTTTCGCCCAACGTGCGCGTACCCATGAGGGTAAGTTGCAGGTTGAGCTGGCGCAGCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAGGTTTGCGTGGTCCGGGTGAAACCCAGCTCGAAACCGACCGTCGTTTGTTGCGTAATCGCATCGTGCAGATACAGTCGCGCCTGGAAAGAGTTGAAAAGCAGCGTGAGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGCCGGTAAATCTACCCTTTTCAATCGCATCACCGAAGCGCGGGTCTACGCGGCAGACCAGTTGTTTGCCACCCTCGACCCGACGTTGCGGCGTATTGACGTTGCAGATGTCGGTGAAACCGTACTTGCAGATACCGTAGGGTTTATTCGCCACCTGCCGCACGATCTGGTGGCGGCATTTAAAGCCACGTTACAAGAGACGCGGCAAGCCACATTACTGCTGCACGTCATTGATGCGGCGGATGTGCGTGTACAAGAAAACATCGAAGCGGTGAATACGGTTCTTGAAGAGATCGACGCTCACGAGATCCCAACCCTGCTGGTGATGAACAAGATCGATATGCTGGAAGATTTCGAACCGCGTATTGATCGGGACGAAGAGAACAAACCGAACCGTGTCTGGCTTTCCGCACAGACCGGAGCGGGGATACCACAGCTTTTTCAGGCTTTGACGGAGCGGCTTTCCGGCGAGGTGGCGCAGCATACATTGCGTCTGCCACCGCAGGAAGGGCGTCTGAGAAGTCGTTTTTATCAGCTTCAGGCAATAGAAAAAGAGTGGATGGAGGAGGACGGCAGCGTAAGTCTGCAAGTTCGTATGCCGATCGTTGACTGGCGTCGCCTCTGTAAACAAGAACCGGCGTTGATCGATTACCTGATCTAA", + "dna_sequence_length": 1281, + "functions": [ + "GTPase, stimulated by 50S subunit binding", + "Mn(2+) homeostasis regulator" + ], + "id": "CDS_4092", + "location": [ + [ + "NC_000913", + 4400672, + "+", + 1281 + ] + ], + "md5": "2323e53c2a3e47cb4ca638d7395f5d58", + "parent_gene": "", + "protein_md5": "6a980eaa53e0e55fc9469506b519d099", + "protein_translation": "MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013663" + ], + [ + "gene_synonym", + "ECK4170" + ], + [ + "gene_synonym", + "EcoGene:EG10436" + ], + [ + "gene_synonym", + "GI:16131996" + ], + [ + "gene_synonym", + "GeneID:948698" + ], + [ + "gene_synonym", + "JW4132" + ], + [ + "gene_synonym", + "NP_418595.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABC7" + ], + [ + "gene_synonym", + "b4174" + ], + [ + "gene_synonym", + "hflA" + ], + [ + "gene_synonym", + "hflK" + ], + [ + "gene_synonym", + "hslY" + ] + ], + "dna_sequence": "ATGGCGTGGAATCAGCCCGGTAATAACGGACAAGACCGCGACCCGTGGGGAAGCAGCAAACCTGGCGGCAACTCTGAGGGAAATGGAAACAAAGGCGGTCGCGATCAAGGGCCACCTGATTTAGATGATATCTTCCGCAAACTGAGCAAAAAGCTCGGTGGTCTGGGCGGCGGTAAAGGCACCGGATCTGGCGGTGGCAGTTCATCGCAAGGCCCGCGCCCGCAGCTTGGCGGTCGTGTCGTTACCATCGCAGCGGCAGCGATTGTCATTATCTGGGCGGCCAGTGGTTTCTATACCATTAAAGAAGCCGAACGCGGCGTGGTAACACGCTTTGGTAAATTCAGCCATCTGGTTGAGCCGGGTCTGAACTGGAAACCGACGTTTATCGACGAAGTCAAACCGGTGAACGTGGAAGCCGTGCGTGAACTGGCCGCTTCTGGTGTGATGCTGACGTCGGACGAGAACGTAGTGCGCGTTGAGATGAACGTGCAGTACCGCGTCACCAATCCGGAAAAATATCTGTATAGCGTGACCAGCCCGGATGACAGCCTGCGTCAGGCTACCGACAGCGCCCTGCGTGGAGTTATCGGTAAATACACCATGGACCGCATTCTGACGGAAGGTCGTACCGTGATTCGTAGCGATACTCAGCGCGAACTGGAAGAGACGATTCGTCCGTATGACATGGGTATCACGCTGCTGGACGTCAACTTCCAGGCTGCTCGTCCGCCGGAAGAAGTAAAAGCGGCGTTTGACGATGCGATTGCCGCGCGTGAAAACGAACAGCAATACATTCGTGAAGCAGAAGCGTATACCAACGAAGTTCAGCCGCGTGCGAACGGTCAGGCGCAACGTATCCTCGAAGAGGCGCGTGCGTACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAA", + "dna_sequence_length": 1260, + "functions": [ + "modulator for HflB protease specific for phage lambda cII repressor" + ], + "id": "CDS_4093", + "location": [ + [ + "NC_000913", + 4402038, + "+", + 1260 + ] + ], + "md5": "266f978e92ed54d2377eb3fb11926877", + "parent_gene": "", + "protein_md5": "60c206983ae8a7d22f231b3be2428ec9", + "protein_translation": "MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE", + "protein_translation_length": 419, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013665" + ], + [ + "gene_synonym", + "ECK4171" + ], + [ + "gene_synonym", + "EcoGene:EG10435" + ], + [ + "gene_synonym", + "GI:16131997" + ], + [ + "gene_synonym", + "GeneID:948697" + ], + [ + "gene_synonym", + "JW4133" + ], + [ + "gene_synonym", + "NP_418596.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABC3" + ], + [ + "gene_synonym", + "b4175" + ], + [ + "gene_synonym", + "hflA" + ], + [ + "gene_synonym", + "hflC" + ] + ], + "dna_sequence": "ATGCGTAAGTCAGTTATCGCGATTATCATCATCGTGCTGGTAGTGCTTTACATGTCTGTCTTTGTCGTCAAAGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGACAACAAACCTCTGGTTTATGAGCCGGGTCTGCATTTCAAGATACCGTTCATTGAAACGGTGAAAATGCTCGACGCACGTATTCAGACCATGGACAACCAGGCCGACCGCTTTGTGACCAAAGAGAAGAAAGACCTGATCGTCGACTCTTACATCAAATGGCGCATCAGCGATTTCAGCCGTTACTACCTGGCAACGGGTGGTGGCGACATTTCGCAAGCGGAAGTGCTGTTGAAACGTAAGTTCTCTGACCGTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAA", + "dna_sequence_length": 1005, + "functions": [ + "HflB protease modulator specific for phage lambda cII repressor" + ], + "id": "CDS_4094", + "location": [ + [ + "NC_000913", + 4403300, + "+", + 1005 + ] + ], + "md5": "481d24465bca4d0d3bfecf4678d12c95", + "parent_gene": "", + "protein_md5": "215d629d08578afa7c3679e091d4fd50", + "protein_translation": "MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013669" + ], + [ + "gene_synonym", + "ECK4172" + ], + [ + "gene_synonym", + "EcoGene:EG12482" + ], + [ + "gene_synonym", + "GI:16131998" + ], + [ + "gene_synonym", + "GeneID:948696" + ], + [ + "gene_synonym", + "JW4134" + ], + [ + "gene_synonym", + "NP_418597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF73" + ], + [ + "gene_synonym", + "b4176" + ], + [ + "gene_synonym", + "yjeT" + ] + ], + "dna_sequence": "ATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGAAAACGATTGGCTGA", + "dna_sequence_length": 198, + "functions": [ + "DUF2065 family protein" + ], + "id": "CDS_4095", + "location": [ + [ + "NC_000913", + 4404386, + "+", + 198 + ] + ], + "md5": "e911adc8614a6527cf467961a9517b97", + "parent_gene": "", + "protein_md5": "50ba39a5e7587e96d30d0fca5fd4db4b", + "protein_translation": "MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYMLRKTIG", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013672" + ], + [ + "gene_synonym", + "ECK4173" + ], + [ + "gene_synonym", + "EcoGene:EG10790" + ], + [ + "gene_synonym", + "GI:16131999" + ], + [ + "gene_synonym", + "GeneID:948695" + ], + [ + "gene_synonym", + "JW4135" + ], + [ + "gene_synonym", + "NP_418598.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7D4" + ], + [ + "gene_synonym", + "b4177" + ], + [ + "gene_synonym", + "purA" + ] + ], + "dna_sequence": "ATGGGTAACAACGTCGTCGTACTGGGCACCCAATGGGGTGACGAAGGTAAAGGTAAGATCGTCGATCTTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGCGTGAGAAAGCGCGTGGCGCGAAAGCGATCGGCACCACCGGTCGTGGTATCGGGCCTGCTTATGAAGATAAAGTAGCACGTCGCGGTCTGCGTGTTGGCGACCTTTTCGACAAAGAAACCTTCGCTGAAAAACTGAAAGAAGTGATGGAATATCACAACTTCCAGTTGGTTAACTACTACAAAGCTGAAGCGGTTGATTACCAGAAAGTTCTGGATGATACGATGGCTGTTGCCGACATCCTGACTTCTATGGTGGTTGACGTTTCTGACCTGCTCGACCAGGCGCGTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAACACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCACTCGTGTAGGTGCAGGTCCGTTCCCGACCGAACTGTTTGATGAAACTGGCGAGTTCCTCTGCAAGCAGGGTAACGAATTCGGCGCAACTACGGGGCGTCGTCGTCGTACCGGCTGGCTGGACACCGTTGCCGTTCGTCGTGCGGTACAGCTGAACTCCCTGTCTGGCTTCTGCCTGACTAAACTGGACGTTCTGGATGGCCTGAAAGAGGTTAAACTCTGCGTGGCTTACCGTATGCCGGATGGTCGCGAAGTGACTACCACTCCGCTGGCAGCTGACGACTGGAAAGGTGTAGAGCCGATTTACGAAACCATGCCGGGCTGGTCTGAATCCACCTTCGGCGTGAAAGATCGTAGCGGCCTGCCGCAGGCGGCGCTGAACTATATCAAGCGTATTGAAGAGCTGACTGGTGTGCCGATCGATATCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAA", + "dna_sequence_length": 1299, + "functions": [ + "adenylosuccinate synthetase" + ], + "id": "CDS_4096", + "location": [ + [ + "NC_000913", + 4404687, + "+", + 1299 + ] + ], + "md5": "e7577f44a9dad71c7b031ea8f482007b", + "parent_gene": "", + "protein_md5": "c75382fff9ecc0ede3bf989eaa3734cf", + "protein_translation": "MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA", + "protein_translation_length": 432, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013676" + ], + [ + "gene_synonym", + "ECK4174" + ], + [ + "gene_synonym", + "EcoGene:EG11212" + ], + [ + "gene_synonym", + "GI:16132000" + ], + [ + "gene_synonym", + "GeneID:948693" + ], + [ + "gene_synonym", + "JW4136" + ], + [ + "gene_synonym", + "NP_418599.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF63" + ], + [ + "gene_synonym", + "b4178" + ], + [ + "gene_synonym", + "nsrR" + ], + [ + "gene_synonym", + "yjeB" + ] + ], + "dna_sequence": "GTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATGGTCAAAATAATCAATCAACTTAGTCGTGCCGGCTACGTGACTGCTGTTCGTGGAAAAAATGGCGGCATTCGCCTGGGTAAACCGGCGAGTGCGATACGTATTGGTGATGTGGTGCGCGAGCTGGAGCCCTTATCGCTGGTGAATTGCAGCAGTGAGTTTTGCCACATTACACCTGCCTGTAGGTTGAAACAGGCACTTTCTAAGGCCGTGCAAAGTTTTCTTACGGAACTGGATAACTACACGCTTGCCGATTTGGTTGAAGAGAATCAACCGCTTTATAAATTATTGCTGGTGGAGTGA", + "dna_sequence_length": 426, + "functions": [ + "nitric oxide-sensitive repressor for NO regulon" + ], + "id": "CDS_4097", + "location": [ + [ + "NC_000913", + 4406190, + "+", + 426 + ] + ], + "md5": "66613431f045d5e995e443acf81e6058", + "parent_gene": "", + "protein_md5": "26784dc35c190b306c0852d4debc0ef8", + "protein_translation": "MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013678" + ], + [ + "gene_synonym", + "ECK4175" + ], + [ + "gene_synonym", + "EcoGene:EG11259" + ], + [ + "gene_synonym", + "GI:90111698" + ], + [ + "gene_synonym", + "GeneID:948692" + ], + [ + "gene_synonym", + "JW5741" + ], + [ + "gene_synonym", + "NP_418600.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21499" + ], + [ + "gene_synonym", + "b4179" + ], + [ + "gene_synonym", + "rnr" + ], + [ + "gene_synonym", + "vacB" + ], + [ + "gene_synonym", + "yjeC" + ] + ], + "dna_sequence": "ATGTCACAAGATCCTTTCCAGGAACGCGAAGCTGAAAAATACGCGAATCCCATCCCTAGTCGGGAATTTATCCTCGAACATTTAACCAAACGTGAAAAACCGGCCAGCCGTGATGAGCTGGCGGTAGAACTGCACATTGAAGGCGAAGAGCAGCTTGAAGGCCTGCGTCGCCGCCTGCGCGCGATGGAGCGCGATGGTCAACTGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGGGTGCTGACCGTAAAGGTCGTCGTGAAGCGCGTATTGTCCGCGTACTGGTGCCAAAAACCAGCCAGATTGTTGGTCGCTACTTTACCGAAGCGGGCGTCGGCTTTGTGGTTCCTGACGACAGCCGTCTGAGCTTCGATATCTTAATCCCGCCCGATCAGATCATGGGCGCGCGGATGGGCTTTGTGGTCGTAGTCGAACTGACTCAGCGTCCGACTCGCCGCACCAAAGCGGTGGGTAAAATCGTCGAAGTGCTGGGCGACAATATGGGCACCGGCATGGCGGTTGATATCGCTCTGCGTACCCATGAAATTCCGTACATCTGGCCGCAGGCTGTTGAGCAACAGGTTGCCGGGCTGAAAGAAGAAGTGCCGGAAGAAGCAAAAGCGGGCCGTGTTGATCTGCGCGATTTACCGCTGGTCACCATTGATGGCGAAGACGCCCGTGACTTTGACGATGCAGTTTACTGCGAGAAAAAACGCGGCGGCGGCTGGCGTTTATGGGTCGCGATTGCCGACGTCAGCTACTATGTGCGTCCGTCAACGCCGCTGGACAGAGAAGCGCGTAACCGTGGCACGTCGGTGTACTTCCCTTCGCAGGTTATCCCGATGCTGCCGGAAGTGCTCTCTAACGGCCTGTGTTCGCTCAACCCGCAGGTAGACCGCCTGTGTATGGTGTGCGAGATGACGGTTTCGTCGAAAGGCCGCCTGACGGGCTACAAATTCTACGAAGCGGTGATGAGCTCTCACGCGCGTCTGACCTACACCAAAGTCTGGCATATTCTGCAGGGCGATCAGGATCTGCGCGAGCAGTACGCCCCGCTGGTTAAGCATCTCGAAGAGTTGCATAACCTCTATAAAGTGCTGGATAAAGCCCGTGAAGAACGCGGTGGGATCTCATTTGAGAGCGAAGAAGCGAAGTTCATTTTCAACGCTGAACGCCGTATTGAACGTATCGAACAGACCCAGCGTAACGACGCGCACAAATTAATTGAAGAGTGCATGATTCTGGCGAATATCTCGGCGGCGCGTTTCGTTGAGAAAGCGAAAGAACCGGCACTGTTCCGTATTCACGACAAGCCGAGCACCGAAGCGATTACCTCTTTCCGTTCAGTGCTGGCGGAGCTGGGGCTGGAACTGCCGGGCGGTAACAAGCCGGAACCGCGTGACTACGCGGAGCTGCTGGAGTCGGTTGCCGATCGTCCTGATGCAGAAATGCTGCAAACCATGCTGCTGCGCTCGATGAAACAGGCGATTTACGATCCAGAAAACCGTGGTCACTTTGGCCTGGCATTGCAGTCCTATGCGCACTTTACTTCGCCGATTCGTCGTTATCCAGACCTGACGCTGCACCGCGCCATTAAATATCTGCTGGCGAAAGAGCAGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTGAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATCGACTTTAGCCTGATCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGACAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAGTGGCAGAGTGA", + "dna_sequence_length": 2442, + "functions": [ + "exoribonuclease R, RNase R" + ], + "id": "CDS_4098", + "location": [ + [ + "NC_000913", + 4406654, + "+", + 2442 + ] + ], + "md5": "2ff34c887ea1f6306ed20067ba283086", + "parent_gene": "", + "protein_md5": "cf7b4c0c5e3e45edc0de4e6a56a14bee", + "protein_translation": "MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPSTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE", + "protein_translation_length": 813, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013684" + ], + [ + "gene_synonym", + "ECK4176" + ], + [ + "gene_synonym", + "EcoGene:EG12483" + ], + [ + "gene_synonym", + "GI:16132002" + ], + [ + "gene_synonym", + "GeneID:948694" + ], + [ + "gene_synonym", + "JW4138" + ], + [ + "gene_synonym", + "NP_418601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63177" + ], + [ + "gene_synonym", + "b4180" + ], + [ + "gene_synonym", + "rlmB" + ], + [ + "gene_synonym", + "yjfH" + ] + ], + "dna_sequence": "ATGAGCGAAATGATTTACGGCATCCACGCAGTGCAGGCCCTGCTGGAGCGCGCCCCTGAACGTTTTCAGGAAGTCTTTATTTTAAAAGGCCGTGAAGATAAACGTCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGACGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCAGAGCAAAATGACCGGACGCCTGGCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAA", + "dna_sequence_length": 732, + "functions": [ + "23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent" + ], + "id": "CDS_4099", + "location": [ + [ + "NC_000913", + 4409275, + "+", + 732 + ] + ], + "md5": "36322577a8dabf728a347f071e41e12b", + "parent_gene": "", + "protein_md5": "408cf5369cfd018aab68e18204ca5547", + "protein_translation": "MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS", + "protein_translation_length": 243, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013687" + ], + [ + "gene_synonym", + "ECK4177" + ], + [ + "gene_synonym", + "EcoGene:EG12484" + ], + [ + "gene_synonym", + "GI:16132003" + ], + [ + "gene_synonym", + "GeneID:948704" + ], + [ + "gene_synonym", + "JW4139" + ], + [ + "gene_synonym", + "NP_418602.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF76" + ], + [ + "gene_synonym", + "b4181" + ], + [ + "gene_synonym", + "yjfI" + ] + ], + "dna_sequence": "ATGACATGGAATCCGTTGGCGCTAGCGACGGCGCTGCAAACTGTACCTGAACAAAATATTGATGTAACAAATAGCGAGAACGCATTAATTATTAAAATGAATGATTATGGCGATTTGCAAATCAATATTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAA", + "dna_sequence_length": 402, + "functions": [ + "DUF2170 family protein" + ], + "id": "CDS_4100", + "location": [ + [ + "NC_000913", + 4410133, + "+", + 402 + ] + ], + "md5": "88771f3283c428ccd0f02e7ab956629b", + "parent_gene": "", + "protein_md5": "355b706ff4325d4dc11f810247702ba4", + "protein_translation": "MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013689" + ], + [ + "gene_synonym", + "ECK4178" + ], + [ + "gene_synonym", + "EcoGene:EG12485" + ], + [ + "gene_synonym", + "GI:16132004" + ], + [ + "gene_synonym", + "GeneID:948703" + ], + [ + "gene_synonym", + "JW4140" + ], + [ + "gene_synonym", + "NP_418603.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF78" + ], + [ + "gene_synonym", + "b4182" + ], + [ + "gene_synonym", + "yjfJ" + ] + ], + "dna_sequence": "ATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCCCGTGCGCTGGAAGCGTTAAGCAAGAACGTTAATCCGTCGTTGATTAACGAAGTTGCTGAAGAAATCGCGCGCCTTGAGAATCTCATTACCGCTGAAGAGCAAGTGTTGTCGAATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAA", + "dna_sequence_length": 699, + "functions": [ + "PspA/IM30 family protein" + ], + "id": "CDS_4101", + "location": [ + [ + "NC_000913", + 4410553, + "+", + 699 + ] + ], + "md5": "f10281a1296cbedc2d32ae00c5ff3039", + "parent_gene": "", + "protein_md5": "1a57bb4e9510d192b7cfdbeb63f0fd04", + "protein_translation": "MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013692" + ], + [ + "gene_synonym", + "ECK4179" + ], + [ + "gene_synonym", + "EcoGene:EG12486" + ], + [ + "gene_synonym", + "GI:16132005" + ], + [ + "gene_synonym", + "GeneID:948702" + ], + [ + "gene_synonym", + "JW4141" + ], + [ + "gene_synonym", + "NP_418604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39293" + ], + [ + "gene_synonym", + "b4183" + ], + [ + "gene_synonym", + "yjfK" + ] + ], + "dna_sequence": "ATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGGCGAAGATATTGATGACATTGATGATATCAAGCTCTTTGTCTATGAAGAGAGCTACGGTATCAGTAAAGAGAGTCACTGGCGCGAGGCGATCAACGCCAAAGCGATGGGAGCAATGACCTTAAACTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCGTCTACATGCTGGAAAAAGTAGAAAATCAAAACCATGCCAAATGGGAGGTCCATAATTTTACCATGGGCTACCAACGGCAAGTAACCGAAGATACTTACGAATATTTGCTGCTAAATGGTGAGGAATCTTTTAACGATCTCGGCGAGCCAGAGTGGTTATTTTCGCGCGCGTTGGGTGTCGATATCCCGCTGACATCACTTCATATTATTGGTTAA", + "dna_sequence_length": 660, + "functions": [ + "DUF2491 family protein" + ], + "id": "CDS_4102", + "location": [ + [ + "NC_000913", + 4411302, + "+", + 660 + ] + ], + "md5": "f4c177d5b5792af9ae50ed03da90f546", + "parent_gene": "", + "protein_md5": "cbc23639b77a5f5c666dbfe3a761a41c", + "protein_translation": "MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013694" + ], + [ + "gene_synonym", + "ECK4180" + ], + [ + "gene_synonym", + "EcoGene:EG12487" + ], + [ + "gene_synonym", + "GI:16132006" + ], + [ + "gene_synonym", + "GeneID:948701" + ], + [ + "gene_synonym", + "JW4142" + ], + [ + "gene_synonym", + "NP_418605.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF80" + ], + [ + "gene_synonym", + "b4184" + ], + [ + "gene_synonym", + "yjfL" + ] + ], + "dna_sequence": "ATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGACTTTATATGCCCGCATTAAGCGAAAAAATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAA", + "dna_sequence_length": 399, + "functions": [ + "UPF0719 family inner membrane protein" + ], + "id": "CDS_4103", + "location": [ + [ + "NC_000913", + 4411979, + "+", + 399 + ] + ], + "md5": "47623a4e7271481bbcff2f3f58342b41", + "parent_gene": "", + "protein_md5": "9aa45ee7f805e22a5ebb8154609c2108", + "protein_translation": "MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013696" + ], + [ + "gene_synonym", + "ECK4181" + ], + [ + "gene_synonym", + "EcoGene:EG12488" + ], + [ + "gene_synonym", + "GI:16132007" + ], + [ + "gene_synonym", + "GeneID:948700" + ], + [ + "gene_synonym", + "JW4143" + ], + [ + "gene_synonym", + "NP_418606.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39295" + ], + [ + "gene_synonym", + "b4185" + ], + [ + "gene_synonym", + "yjfM" + ] + ], + "dna_sequence": "ATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCACAAAAATACTTAACGTTGGCGCTAATGGGCGGTGCCGCTTTTTTCGTATTGAAAGGTTGTAGCGATAGTAGCGATGTCGATAACGACGGCGACGGAACGTTTTACGCGACAGTGCAGGATTGTATTGATGACGGTAATAATGCCGACATTTGCGCGCGTGGCTGGAACAACGCCAAAACGGCATTTTATGCCGATGTTCCGAAGAATATGACTCAGCAGAACTGTCAGTCTAAGTACGAAAATTGCTACTACGACAATGTTGAACAGAGTTGGATCCCGGTCGTTTCTGGATTTTTGTTAAGCCGGGTTATTCGTAAAGATCGCGATGAGCCGTTTGTTTATAACAGCGGCGGTTCCTCTTTTGCTTCGCGCCCAGTCTGGCGCAGCACTTCTGGTGATTACTCCTGGCGCTCCGGTTCTGGCAAAAAAGAGTCTTACTCTTCGGGCGGCTTTACCACCAAAAAAGCGTCTACCGTTTCTCGCGGCGGCTATGGTCGTTCTTCCAGCGCCCGTGGGCATTGGGGAGGCTAA", + "dna_sequence_length": 639, + "functions": [ + "DUF1190 family protein" + ], + "id": "CDS_4104", + "location": [ + [ + "NC_000913", + 4412387, + "+", + 639 + ] + ], + "md5": "013eb38bbb285c18e4c491edb3da56c0", + "parent_gene": "", + "protein_md5": "1f2f1298eb2531a50e3199b70856aee8", + "protein_translation": "MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013698" + ], + [ + "gene_synonym", + "ECK4182" + ], + [ + "gene_synonym", + "EcoGene:EG11812" + ], + [ + "gene_synonym", + "GI:16132008" + ], + [ + "gene_synonym", + "GeneID:948699" + ], + [ + "gene_synonym", + "JW4144" + ], + [ + "gene_synonym", + "NP_418607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33222" + ], + [ + "gene_synonym", + "b4186" + ], + [ + "gene_synonym", + "yjfC" + ] + ], + "dna_sequence": "ATGCTGAGACACAACGTTCCTGTGCGACGGGATCTGGACCAGATCGCCGCTGACAACGGTTTCGACTTTCATATCATCGACAATGAAATCTATTGGGATGAGAGTCGGGCTTACCGTTTTACTCTGCGCCAGATTGAAGAGCAGATCGAAAAACCGACTGCGGAACTGCATCAGATGTGCCTTGAGGTGGTGGATCGCGCGGTAAAAGATGAAGAGATCCTGACGCAACTGGCGATCCCGCCGTTGTACTGGGATGTGATCGCTGAAAGCTGGCGCGCCCGCGATCCTTCGCTGTATGGACGGATGGATTTTGCCTGGTGTGGCAATGCGCCGGTGAAGCTGCTGGAGTACAACGCCGATACGCCAACTTCATTGTACGAGTCGGCTTATTTCCAGTGGCTGTGGCTGGAGGATGCCCGGCGCAGCGGCATTATTCCGCGTGATGCCGATCAGTACAATGCTATTCAGGAACGCCTGATTTCACGCTTTAGCGAGCTTTACAGTCGGGAACCGTTTTATTTTTGCTGCTGTCAGGACACCGATGAAGACAGGAGTACCGTGCTGTACTTGCAGGACTGCGCCCAGCAGGCAGGGCAGGAGTCGCGGTTTATCTACATTGAAGATCTCGGTTTGGGCGTCGGCGGCGTACTGACCGATCTTGATGATAATGTCATCCAGCGTGCATTTAAGCTGTATCCGCTGGAGTGGATGATGCGTGACGATAACGGTCCGCTGCTGCGCAAGCGTCGCGAGCAATGGGTGGAGCCGTTATGGAAAAGTATCTTGAGTAATAAAGGGCTAATGCCGCTGCTTTGGCGCTTCTTCCCTGGTCATCCTAATCTTCTTGCGTCCTGGTTCGATGGCGAGAAACCGCAGATTGCCGCTGGCGAAAGCTATGTGCGTAAACCAATCTATTCGCGCGAAGGCGGCAACGTCACCATTTTTGACGGCAAGAATAACGTTGTTGACCACGCTGATGGTGATTACGCCGATGAACCGATGATCTACCAGGCGTTTCAACCTCTGCCGCGGTTTGGCGATAGCTACACACTCATCGGTAGCTGGATTGTCGATGATGAAGCGTGCGGAATGGGGATCCGTGAAGATAACACACTGATCACCAAAGACACCTCACGTTTCGTTCCGCATTACATTGCTGGATAA", + "dna_sequence_length": 1164, + "functions": [ + "ATP-Grasp family ATPase" + ], + "id": "CDS_4105", + "location": [ + [ + "NC_000913", + 4413028, + "+", + 1164 + ] + ], + "md5": "06be1c0dcb870a8886608c08d7a6c90e", + "parent_gene": "", + "protein_md5": "527fd550a86e09d27e3f6c7489c4e7d6", + "protein_translation": "MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG", + "protein_translation_length": 387, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013701" + ], + [ + "gene_synonym", + "ECK4183" + ], + [ + "gene_synonym", + "EcoGene:EG11811" + ], + [ + "gene_synonym", + "GI:162135915" + ], + [ + "gene_synonym", + "GeneID:948710" + ], + [ + "gene_synonym", + "JW5867" + ], + [ + "gene_synonym", + "NP_418608.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33224" + ], + [ + "gene_synonym", + "aidB" + ], + [ + "gene_synonym", + "b4187" + ] + ], + "dna_sequence": "GTGCACTGGCAAACTCACACCGTTTTTAATCAACCTATACCATTAAATAACAGCAACTTATACCTGTCTGATGGCGCGCTCTGCGAAGCGGTAACGCGTGAAGGTGCTGGCTGGGATAGCGATTTTCTAGCCAGTATTGGTCAGCAGTTAGGAACGGCTGAATCCCTTGAACTGGGGCGGCTGGCGAATGTGAATCCGCCTGAATTATTGCGCTACGATGCGCAAGGACGCCGTCTGGACGATGTGCGTTTTCACCCCGCCTGGCACCTGCTGATGCAGGCGCTATGTACCAATCGGGTGCACAATCTTGCCTGGGAAGAAGACGCTCGCTCCGGCGCATTTGTGGCGCGCGCGGCGCGTTTTATGTTACATGCGCAGGTTGAGGCAGGGTCGTTATGTCCGATAACCATGACCTTTGCCGCCACGCCATTGTTGTTACAGATGTTACCCGCGCCGTTTCAGGACTGGACCACGCCGCTATTGAGCGATCGCTACGATTCTCACTTATTGCCAGGTGGGCAAAAACGCGGTTTGTTGATTGGCATGGGAATGACGGAAAAGCAGGGCGGTTCCGATGTTATGAGCAACACCACCCGTGCAGAGCGTCTGGAAGATGGCTCTTATCGGCTGGTGGGGCATAAATGGTTTTTCTCGGTTCCGCAAAGCGATGCGCATCTGGTGCTGGCGCAGACCGCGGGTGGTCTGTCCTGCTTTTTTGTGCCGCGCTTTTTGCCTGACGGGCAACGCAACGCGATTCGCCTCGAGCGGCTGAAAGATAAGCTGGGTAATCGCTCTAACGCCAGTTGCGAAGTGGAGTTTCAGGATGCCATTGGTTGGTTGTTGGGGCTGGAAGGGGAAGGAATTCGTCTGATCCTGAAAATGGGTGGGATGACGCGTTTTGATTGCGCCCTGGGTAGCCATGCCATGATGCGCCGTGCATTTTCGCTGGCGATTTATCATGCACATCAACGCCATGTTTTTGGTAATCCATTGATCCAACAGCCCCTTATGCGTCATGTCTTAAGTCGCATGGCACTTCAGCTTGAAGGGCAAACGGCGTTGCTGTTTCGTCTTGCGCGAGCGTGGGACCGGCGTGCCGATGCCAAAGAAGCCCTGTGGGCGCGTTTATTTACGCCTGCGGCAAAATTTGTGATCTGCAAAAGAGGTATGCCGTTTGTGGCCGAAGCGATGGAGGTGCTGGGCGGCATTGGTTATTGCGAGGAGAGTGAGCTGCCGCGGCTTTACCGGGAGATGCCGGTAAACAGTATTTGGGAAGGTTCCGGCAATATTATGTGCCTGGATGTGTTGCGCGTTCTCAATAAGCAAGCGGGCGTATACGACTTATTGTCGGAAGCATTTGTGGAAGTGAAAGGGCAGGATCGCTATTTTGATCGCGCGGTTCGTCGTTTACAGCAGCAGCTGCGTAAGCCAGCTGAAGAACTGGGGCGAGAGATTACTCATCAGCTATTCCTGCTGGGCTGCGGTGCGCAAATGTTGAAATATGCTTCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAA", + "dna_sequence_length": 1626, + "functions": [ + "DNA alkylation damage repair protein", + "flavin-containing DNA binding protein, weak isovaleryl CoA dehydrogenase" + ], + "id": "CDS_4106", + "location": [ + [ + "NC_000913", + 4414275, + "+", + 1626 + ] + ], + "md5": "643f42dcd8cf5c93774ef70c3a57720b", + "parent_gene": "", + "protein_md5": "5585a2b8bcfe7daecea7194d845b1744", + "protein_translation": "MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTAGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV", + "protein_translation_length": 541, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013704" + ], + [ + "gene_synonym", + "ECK4184" + ], + [ + "gene_synonym", + "EcoGene:EG12521" + ], + [ + "gene_synonym", + "GI:90111700" + ], + [ + "gene_synonym", + "GeneID:948709" + ], + [ + "gene_synonym", + "JW5742" + ], + [ + "gene_synonym", + "NP_418609.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF82" + ], + [ + "gene_synonym", + "b4188" + ], + [ + "gene_synonym", + "yjfN" + ] + ], + "dna_sequence": "ATGAAACAATTACTTGCCTCACCCTCGCTGCAATTAGTGACTTATCCTGCGAGCGCCACGGCACAGTCTGCAGAATTCGCCAGTGCTGACTGCGTGACGGGCCTGAATGAAATAGGTCAGATCTCAGTTAGCAATATTTCAGGGGATCCGCAGGACGTGGAACGTATCGTGGCGTTAAAGGCCGATGAACAAGGTGCGTCATGGTACCGCATTATTACCATGTACGAAGACCAGCAGCCTGATAACTGGCGCGTACAGGCGATACTGTATGCATGA", + "dna_sequence_length": 276, + "functions": [ + "DUF1471 family periplasmic protein" + ], + "id": "CDS_4107", + "location": [ + [ + "NC_000913", + 4416292, + "-", + 276 + ] + ], + "md5": "0f8e10fd7ba727b399bec8242da86953", + "parent_gene": "", + "protein_md5": "aa7e9378acc372795492f11cc4ea8059", + "protein_translation": "MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013706" + ], + [ + "gene_synonym", + "ECK4185" + ], + [ + "gene_synonym", + "EcoGene:EG12489" + ], + [ + "gene_synonym", + "GI:90111701" + ], + [ + "gene_synonym", + "GeneID:948708" + ], + [ + "gene_synonym", + "JW5743" + ], + [ + "gene_synonym", + "NP_418610.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39297" + ], + [ + "gene_synonym", + "b4189" + ], + [ + "gene_synonym", + "bsmA" + ], + [ + "gene_synonym", + "yjfO" + ] + ], + "dna_sequence": "ATGGTTAGCAGGAAACGTAATAGCGTTATTTACCGGTTTGCCAGTTTATTATTGGTGTTGATGTTAAGTGCCTGTAGCGCACTGCAAGGTACGCCACAGCCAGCACCGCCAGTAACGGACCATCCGCAAGAGATTCGCCGCGACCAGACGCAAGGGTTACAGCGAATAGGTAGCGTAAGCACGATGGTTCGGGGTTCTCCGGATGACGCATTAGCAGAAATCAAAGCGAAAGCTGTCGCTGCAAAAGCTGATTATTACGTTGTCGTCATGGTGGACGAAACCATCGTGACAGGACAGTGGTATTCACAAGCCATTTTGTACCGTAAATAA", + "dna_sequence_length": 330, + "functions": [ + "bioflm peroxide resistance protein" + ], + "id": "CDS_4108", + "location": [ + [ + "NC_000913", + 4416770, + "-", + 330 + ] + ], + "md5": "7c7955ceba101dd32182efbba616f3b3", + "parent_gene": "", + "protein_md5": "604c1960ad8625228c6885656109ff24", + "protein_translation": "MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVSTMVRGSPDDALAEIKAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013711" + ], + [ + "gene_synonym", + "ECK4186" + ], + [ + "gene_synonym", + "EcoGene:EG12490" + ], + [ + "gene_synonym", + "GI:16132012" + ], + [ + "gene_synonym", + "GeneID:948707" + ], + [ + "gene_synonym", + "JW4148" + ], + [ + "gene_synonym", + "NP_418611.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39298" + ], + [ + "gene_synonym", + "b4190" + ], + [ + "gene_synonym", + "yjfP" + ] + ], + "dna_sequence": "ATGATTGAAATAGAATCACGCGAGCTGGCAGATATTCCCGTTCTTCATGCTTATCCTGTCGGGCAAAAAGATACCCCGTTACCGTGCGTAATTTTTTATCACGGCTTTACTTCATCCAGTCTGGTGTATAGCTATTTTGCCGTTGCGCTGGCGCAGGCTGGTTTGCGGGTGATCATGCCGGATGCGCCCGATCACGGTAGCCGTTTTAGTGGTGACGCAGCGCGGCGGTTAAATCAATTCTGGCAAATCTTGCTACAAAGTATGCAGGAATTCACTACTTTACGTGCGGCAATAGCCGAAGAAAACTGGCTGCTTGATGACCGTCTGGCAGTCGGTGGCGCGTCGATGGGCGCGATGACGGCACTGGGGATTACCGCTCGCCACCCCACGGTGAGATGTACCGCCAGCATGATGGGATCGGGCTATTTTACATCACTCGCCCGTTCACTGTTTCCACCGCTGATACCTGAAACGGCAGCACAGCAGAATGAATTCAATAACATTGTCGCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACCGCATTACGCCTGAGGCGTTAGATGCTGCCGTGACATTTTTCCGCCAGCATCTTTAA", + "dna_sequence_length": 750, + "functions": [ + "acyl CoA esterase" + ], + "id": "CDS_4109", + "location": [ + [ + "NC_000913", + 4416952, + "+", + 750 + ] + ], + "md5": "df559795c88bec096fb7727099b14fc1", + "parent_gene": "", + "protein_md5": "d551b8bf35a08e8ddf0924ffad2c326e", + "protein_translation": "MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDAAVTFFRQHL", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013713" + ], + [ + "gene_synonym", + "ECK4187" + ], + [ + "gene_synonym", + "EcoGene:EG12491" + ], + [ + "gene_synonym", + "GI:16132013" + ], + [ + "gene_synonym", + "GeneID:948706" + ], + [ + "gene_synonym", + "JW4149" + ], + [ + "gene_synonym", + "NP_418612.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9W0" + ], + [ + "gene_synonym", + "b4191" + ], + [ + "gene_synonym", + "ulaR" + ], + [ + "gene_synonym", + "yjfQ" + ] + ], + "dna_sequence": "ATGACTGAAGCACAAAGACATCAAATCCTCCTGGAAATGCTCGCACAATTGGGCTTTGTGACCGTTGAGAAAGTCGTTGAGCGTCTGGGAATTTCGCCTGCCACTGCGCGACGCGATATCAATAAACTTGACGAAAGCGGCAAACTGAAAAAAGTGCGCAATGGCGCAGAAGCTATTACCCAACAGCGCCCGCGCTGGACGCCGATGAATCTGCATCAGGCGCAGAATCACGATGAAAAAGTACGTATCGCTAAAGCGGCCTCGCAGCTGGTTAATCCGGGCGAAAGCGTAGTCATCAACTGCGGCTCCACCGCGTTTCTGCTTGGGCGGGAAATGTGTGGCAAGCCAGTGCAAATCATCACTAATTATCTACCGCTGGCAAATTACCTGATCGATCAAGAACATGACAGCGTGATCATTATGGGCGGACAGTACAACAAAAGTCAGTCCATCACTTTAAGCCCGCAGGGCAGCGAAAACAGTCTCTATGCCGGGCACTGGATGTTTACCAGCGGAAAAGGGCTGACCGCAGAAGGGTTGTATAAAACCGATATGCTGACAGCAATGGCAGAGCAGAAGATGCTGAGCGTGGTAGGGAAACTGGTGGTACTGGTTGATAGCAGTAAGATTGGCGAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAA", + "dna_sequence_length": 756, + "functions": [ + "transcriptional repressor for the L-ascorbate utilization divergent operon" + ], + "id": "CDS_4110", + "location": [ + [ + "NC_000913", + 4418453, + "-", + 756 + ] + ], + "md5": "da8f8790669a1b754c19371ee2e9f2d3", + "parent_gene": "", + "protein_md5": "fa6722683dbb832b1c9f0e37fbd9c1a0", + "protein_translation": "MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQLEAQGVSILRV", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013717" + ], + [ + "gene_synonym", + "ECK4188" + ], + [ + "gene_synonym", + "EcoGene:EG12492" + ], + [ + "gene_synonym", + "GI:90111702" + ], + [ + "gene_synonym", + "GeneID:948705" + ], + [ + "gene_synonym", + "JW5868" + ], + [ + "gene_synonym", + "NP_418613.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39300" + ], + [ + "gene_synonym", + "b4192" + ], + [ + "gene_synonym", + "ulaG" + ], + [ + "gene_synonym", + "yjfR" + ] + ], + "dna_sequence": "ATGAGTAAAGTGAAAAGTATCACCCGTGAATCCTGGATCCTGAGCACTTTCCCGGAGTGGGGTAGCTGGTTGAATGAAGAAATTGAACAAGAACAGGTCGCTCCTGGCACATTTGCGATGTGGTGGCTTGGCTGCACCGGGATCTGGTTGAAATCGGAAGGTGGCACCAACGTTTGCGTTGATTTCTGGTGCGGCACTGGCAAACAAAGTCACGGTAACCCGTTAATGAAACAGGGTCACCAGATGCAGCGCATGGCTGGCGTGAAAAAACTGCAGCCAAACCTGCGTACCACCCCGTTTGTTCTTGATCCGTTTGCGATTCGCCAGATCGACGCGGTACTGGCGACTCACGATCACAACGATCATATCGACGTTAACGTCGCTGCTGCCGTGATGCAGAATTGTGCAGATGACGTACCGTTTATCGGACCGAAAACCTGTGTGGATTTGTGGATTGGCTGGGGCGTACCGAAAGAGCGTTGCATCGTGGTCAAACCGGGCGATGTAGTAAAAGTGAAAGACATTGAAATTCATGCGCTTGATGCTTTCGACCGTACTGCACTGATCACCCTGCCTGCCGATCAAAAAGCGGCTGGCGTACTGCCAGATGGCATGGACGATCGCGCGGTGAACTACCTGTTCAAAACGCCTGGCGGCTCCCTGTATCACAGCGGCGACTCCCACTACTCTAACTATTATGCGAAGCACGGTAACGAACATCAGATCGACGTGGCGTTAGGATCGTACGGCGAAAACCCGCGCGGTATCACCGACAAAATGACCAGCGCCGATATGCTGCGTATGGGTGAAGCGCTGAATGCGAAAGTAGTGATCCCGTTCCACCACGATATCTGGTCAAACTTCCAGGCCGATCCGCAAGAGATCCGCGTGCTGTGGGAGATGAAAAAAGATCGCCTGAAGTATGGCTTCAAGCCGTTTATCTGGCAGGTGGGTGGCAAATTTACCTGGCCGCTGGATAAAGACAACTTCGAGTACCACTATCCGCGCGGTTTCGATGATTGCTTCACTATTGAACCGGATCTGCCGTTCAAGTCATTCCTGTAA", + "dna_sequence_length": 1065, + "functions": [ + "L-ascorbate 6-phosphate lactonase" + ], + "id": "CDS_4111", + "location": [ + [ + "NC_000913", + 4419625, + "-", + 1065 + ] + ], + "md5": "47407167287fa04d17bc930ec9999459", + "parent_gene": "", + "protein_md5": "08169f33f58575bd10e235442cd0ac8b", + "protein_translation": "MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL", + "protein_translation_length": 354, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013723" + ], + [ + "gene_synonym", + "ECK4189" + ], + [ + "gene_synonym", + "EcoGene:EG12493" + ], + [ + "gene_synonym", + "GI:90111703" + ], + [ + "gene_synonym", + "GeneID:948717" + ], + [ + "gene_synonym", + "JW5744" + ], + [ + "gene_synonym", + "NP_418614.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39301" + ], + [ + "gene_synonym", + "b4193" + ], + [ + "gene_synonym", + "sgaT" + ], + [ + "gene_synonym", + "ulaA" + ], + [ + "gene_synonym", + "yjfS" + ] + ], + "dna_sequence": "ATGGAGATCCTCTACAACATCTTTACCGTGTTTTTTAACCAGGTCATGACCAATGCCCCGTTGTTGCTGGGTATTGTGACCTGTCTGGGCTACATCCTACTGCGCAAAAGTGTCAGCGTTATTATTAAAGGCACGATTAAAACCATAATTGGTTTCATGTTGTTGCAGGCAGGGTCCGGCATCCTCACCAGCACCTTCAAACCGGTGGTGGCGAAAATGTCCGAAGTCTACGGCATTAACGGCGCAATTTCCGATACCTACGCTTCAATGATGGCAACCATCGACCGCATGGGCGATGCCTATAGCTGGGTGGGTTACGCCGTATTGTTAGCGCTGGCGCTGAACATCTGTTACGTGCTGTTGCGTCGCATTACCGGCATTCGCACAATCATGTTGACCGGCCACATCATGTTCCAGCAGGCCGGGTTGATTGCCGTTACGCTGTTTATCTTCGGCTACTCCATGTGGACCACCATTATCTGTACCGCGATTCTGGTTTCGCTCTACTGGGGCATCACTTCCAACATGATGTACAAGCCGACTCAGGAAGTGACGGATGGCTGTGGTTTCTCCATCGGTCACCAGCAGCAGTTTGCATCATGGATTGCCTATAAAGTCGCGCCGTTCCTCGGCAAAAAAGAGGAGAGCGTTGAAGACCTCAAATTGCCGGGCTGGCTGAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGCCTGATCCCAGGTGCGGTTCTGGCGATTGACTGTGCAGCTATCTATAGCTTCGCGCCGAACGCCGTGGTCTGGGGCTTTATGTGGGGCACCATCGGTCAGCTGATTGCGGTTGGCATCCTGGTCGCCTGCGGCTCCTCGATCCTGATTATTCCTGGCTTTATCCCGATGTTCTTCTCTAACGCCACCATCGGCGTGTTCGCTAACCACTTCGGCGGCTGGCGTGCGGCGCTGAAGATTTGTCTGGTGATGGGGATGATCGAAATCTTTGGTTGCGTCTGGGCGGTGAAACTCACCGGTATGAGTGCCTGGATGGGCATGGCGGACTGGTCGATTCTGGCACCGCCGATGATGCAAGGCTTCTTCTCCATCGGTATCGCCTTTATGGCCGTCATCATTGTAATTGCACTGGCTTATATGTTCTTCGCTGGCCGCGCGCTGCGCGCAGAAGAAGATGCAGAAAAACAACTGGCAGAACAGTCTGCTTAA", + "dna_sequence_length": 1398, + "functions": [ + "L-ascorbate-specific enzyme IIC permease component of PTS" + ], + "id": "CDS_4112", + "location": [ + [ + "NC_000913", + 4419980, + "+", + 1398 + ] + ], + "md5": "d0457ba6664d5da9c96fc6370fe4165d", + "parent_gene": "", + "protein_md5": "2ad846d19cbf9ed0b59fbddcf8daac0e", + "protein_translation": "MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013725" + ], + [ + "gene_synonym", + "ECK4190" + ], + [ + "gene_synonym", + "EcoGene:EG12494" + ], + [ + "gene_synonym", + "GI:16132016" + ], + [ + "gene_synonym", + "GeneID:948716" + ], + [ + "gene_synonym", + "JW4152" + ], + [ + "gene_synonym", + "NP_418615.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69822" + ], + [ + "gene_synonym", + "b4194" + ], + [ + "gene_synonym", + "sgaB" + ], + [ + "gene_synonym", + "ulaB" + ], + [ + "gene_synonym", + "yjfT" + ] + ], + "dna_sequence": "ATGACCGTACGTATTCTGGCTGTGTGTGGCAACGGACAAGGCAGTTCCATGATCATGAAGATGAAAGTGGACCAGTTTTTAACCCAATCAAACATTGACCATACGGTAAACAGCTGCGCGGTTGGCGAGTACAAAAGCGAGTTGAGTGGCGCGGATATCATCATCGCTTCTACGCACATTGCGGGCGAAATCACCGTGACCGGCAACAAATACGTGGTTGGCGTGCGCAACATGCTCTCTCCTGCCGACTTTGGCCCGAAACTGCTGGAAGTGATCAAAGAGCATTTCCCGCAGGATGTGAAGTAA", + "dna_sequence_length": 306, + "functions": [ + "L-ascorbate-specific enzyme IIB component of PTS" + ], + "id": "CDS_4113", + "location": [ + [ + "NC_000913", + 4421393, + "+", + 306 + ] + ], + "md5": "0e22860b32b28e094e5234d1ab48695b", + "parent_gene": "", + "protein_md5": "0373f0dcb85ad5deb6a8d78e37a5b8da", + "protein_translation": "MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK", + "protein_translation_length": 101, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013727" + ], + [ + "gene_synonym", + "ECK4191" + ], + [ + "gene_synonym", + "EcoGene:EG12495" + ], + [ + "gene_synonym", + "GI:16132017" + ], + [ + "gene_synonym", + "GeneID:948715" + ], + [ + "gene_synonym", + "JW4153" + ], + [ + "gene_synonym", + "NP_418616.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69820" + ], + [ + "gene_synonym", + "b4195" + ], + [ + "gene_synonym", + "ptxA" + ], + [ + "gene_synonym", + "sgaA" + ], + [ + "gene_synonym", + "ulaC" + ], + [ + "gene_synonym", + "yjfU" + ] + ], + "dna_sequence": "ATGAAATTACGTGATTCGCTGGCGGAAAATAAATCCATCCGCCTGCAGGCTGAAGCAGAGACATGGCAGGAAGCGGTGAAAATCGGCGTTGACCTGCTGGTGGCGGCAGATGTGGTAGAGCCGCGTTACTACCAGGCGATTCTGGATGGCGTTGAACAGTTCGGTCCTTATTTCGTTATCGCTCCGGGCCTGGCAATGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAA", + "dna_sequence_length": 465, + "functions": [ + "L-ascorbate-specific enzyme IIA component of PTS" + ], + "id": "CDS_4114", + "location": [ + [ + "NC_000913", + 4421708, + "+", + 465 + ] + ], + "md5": "4df204dea5b3ca5b1df10abd5eb08709", + "parent_gene": "", + "protein_md5": "6803f30e951285a73a0344012ebec98d", + "protein_translation": "MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGFSLVTLKKPLEFNHDDNDPVDILITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013729" + ], + [ + "gene_synonym", + "ECK4192" + ], + [ + "gene_synonym", + "EcoGene:EG12496" + ], + [ + "gene_synonym", + "GI:16132018" + ], + [ + "gene_synonym", + "GeneID:948714" + ], + [ + "gene_synonym", + "JW4154" + ], + [ + "gene_synonym", + "NP_418617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39304" + ], + [ + "gene_synonym", + "b4196" + ], + [ + "gene_synonym", + "sgaH" + ], + [ + "gene_synonym", + "ulaD" + ], + [ + "gene_synonym", + "yjfV" + ] + ], + "dna_sequence": "ATGTCATTACCGATGTTGCAAGTCGCGCTGGACAACCAGACTATGGATAGCGCCTACGAAACCACTCGCCTGATTGCCGAAGAAGTCGACATTATCGAAGTGGGCACCATTCTGTGCGTGGGCGAAGGCGTGCGTGCGGTTCGTGACCTGAAAGCGCTCTACCCGCACAAAATCGTACTGGCAGACGCCAAAATTGCCGATGCAGGCAAAATCCTTTCGCGTATGTGCTTCGAAGCCAACGCTGACTGGGTGACGGTAATTTGCTGTGCGGATATCAACACCGCCAAAGGCGCGCTGGACGTGGCAAAAGAGTTTAACGGCGACGTGCAGATCGAACTGACCGGTTACTGGACCTGGGAACAGGCGCAACAGTGGCGCGATGCAGGCATTGGGCAGGTGGTTTATCACCGCAGCCGTGACGCGCAGGCCGCAGGCGTGGCGTGGGGCGAAGCGGACATCACCGCGATCAAACGTCTTTCCGATATGGGCTTCAAAGTCACCGTCACCGGAGGCCTGGCGCTGGAAGATCTGCCGCTGTTCAAGGGTATTCCGATTCACGTCTTTATCGCGGGCCGTAGTATCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAA", + "dna_sequence_length": 651, + "functions": [ + "3-keto-L-gulonate 6-phosphate decarboxylase" + ], + "id": "CDS_4115", + "location": [ + [ + "NC_000913", + 4422186, + "+", + 651 + ] + ], + "md5": "9862aae167e8e5e78f287e507c9988e1", + "parent_gene": "", + "protein_md5": "fafbd2fd3b195cd952ba25042ba54d8d", + "protein_translation": "MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013732" + ], + [ + "gene_synonym", + "ECK4193" + ], + [ + "gene_synonym", + "EcoGene:EG12497" + ], + [ + "gene_synonym", + "GI:16132019" + ], + [ + "gene_synonym", + "GeneID:948712" + ], + [ + "gene_synonym", + "JW4155" + ], + [ + "gene_synonym", + "NP_418618.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39305" + ], + [ + "gene_synonym", + "b4197" + ], + [ + "gene_synonym", + "sgaU" + ], + [ + "gene_synonym", + "ulaE" + ], + [ + "gene_synonym", + "yjfW" + ] + ], + "dna_sequence": "ATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGAAACCGGCGTGCGCGTGCCGTCCATGTGCCTTTCTGCTCATCGTCGTTTCCCGCTGGGCAGTGAAGATGACGCGGTGCGGGCGCAGGGGCTGGAGATTATGCGTAAAGCTATCCAGTTCGCCCAGGATGTCGGTATTCGCGTGATCCAGCTGGCGGGCTATGACGTTTACTATCAGGAAGCCAATAACGAAACGCGTCGTCGTTTCCGTGACGGCCTGAAAGAGAGCGTTGAGATGGCAAGCCGCGCGCAGGTGACGCTGGCGATGGAGATCATGGATTATCCGTTGATGAGCTCCATCAGCAAGGCGCTGGGATACGCGCACTATCTCAACAATCCGTGGTTCCAGCTCTACCCGGATATCGGCAACCTGTCGGCGTGGGACAACGATGTGCAGATGGAGTTGCAGGCCGGAATCGGGCATATCGTCGCGGTACATGTGAAAGACACCAAACCTGGCGTCTTCAAAAACGTGCCGTTTGGCGAAGGTGTAGTGGATTTCGAACGTTGTTTCGAAACGCTCAAACAGAGTGGCTATTGCGGGCCGTACCTGATTGAGATGTGGAGCGAAACGGCGGAAGACCCGGCGGCAGAAGTGGCGAAAGCGCGTGATTGGGTGAAAGCGCGCATGGCGAAAGCGGGCATGGTGGAGGCGGCATAA", + "dna_sequence_length": 855, + "functions": [ + "L-xylulose 5-phosphate 3-epimerase" + ], + "id": "CDS_4116", + "location": [ + [ + "NC_000913", + 4422846, + "+", + 855 + ] + ], + "md5": "92ffb970b56802ec1e74ea283b09a183", + "parent_gene": "", + "protein_md5": "e744c4362d57b9423be20d644c32bab0", + "protein_translation": "MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013734" + ], + [ + "gene_synonym", + "ECK4194" + ], + [ + "gene_synonym", + "EcoGene:EG12498" + ], + [ + "gene_synonym", + "GI:16132020" + ], + [ + "gene_synonym", + "GeneID:948711" + ], + [ + "gene_synonym", + "JW4156" + ], + [ + "gene_synonym", + "NP_418619.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39306" + ], + [ + "gene_synonym", + "b4198" + ], + [ + "gene_synonym", + "sgaE" + ], + [ + "gene_synonym", + "ulaF" + ], + [ + "gene_synonym", + "yjfX" + ] + ], + "dna_sequence": "ATGCAAAAGCTAAAACAGCAGGTATTTGAAGCCAACATGGAGCTGCCGCGCTACGGGCTGGTGACCTTTACCTGGGGCAACGTCAGCGCTATCGACCGCGAACGCGGGCTGGTGGTGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCATTGTCCATACCCACTCCACTCATGCCACCGCATGGGCGCAGGCGGGGCTGGCGATCCCGGCGTTAGGCACCACGCACGCCGACTACTTCTTTGGCGACATTCCGTGTACGCGCGGGTTAAGCGAAGAAGAGGTGCAGGGCGAGTATGAACTGAACACCGGCAAAGTGATTATCGAAACGCTGGGCAACGCCGAGCCGCTGCATACGCCGGGAATTGTGGTGTATCAGCACGGGCCGTTCGCCTGGGGGAAAGATGCTCACGATGCGGTGCATAACGCGGTGGTGATGGAAGAAGTGGCGAAAATGGCGTGGATTGCCCGCGGCATTAACCCACAACTCAATCACATCGACAGCTTCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAG", + "dna_sequence_length": 687, + "functions": [ + "L-ribulose 5-phosphate 4-epimerase" + ], + "id": "CDS_4117", + "location": [ + [ + "NC_000913", + 4423700, + "+", + 687 + ] + ], + "md5": "7c218732ced8b4988951f5ce4ffe9e74", + "parent_gene": "", + "protein_md5": "5a4dee11c475439b2b63be64dfb54944", + "protein_translation": "MQKLKQQVFEANMELPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKAADMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSFLMNKHFMRKHGPNAYYGQK", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013736" + ], + [ + "gene_synonym", + "ECK4195" + ], + [ + "gene_synonym", + "EcoGene:EG12499" + ], + [ + "gene_synonym", + "GI:16132021" + ], + [ + "gene_synonym", + "GeneID:948713" + ], + [ + "gene_synonym", + "JW4157" + ], + [ + "gene_synonym", + "NP_418620.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF86" + ], + [ + "gene_synonym", + "b4199" + ], + [ + "gene_synonym", + "yjfY" + ] + ], + "dna_sequence": "ATGTTCAGTCGTGTTTTAGCCCTTCTGGCTGTGCTTTTGCTAAGTGCAAATACATGGGCAGCCATTGAAATTAATAACCACCAGGCCAGAAATATGGACGATGTGCAAAGCTTAGGCGTGATTTATATCAATCATAATTTCGCCACTGAAAGCGAAGCACGTCAGGCATTAAATGAAGAAACAGATGCGCAAGGCGCAACGTACTACCACGTAATTCTGATGCGGGAACCGGGGAGTAACGGCAATATGCACGCCAGCGCGGATATTTATCGCTAG", + "dna_sequence_length": 276, + "functions": [ + "YhcN family protein, periplasmic" + ], + "id": "CDS_4118", + "location": [ + [ + "NC_000913", + 4424791, + "-", + 276 + ] + ], + "md5": "e36864de2fba39d067fc0ce3d477a5cb", + "parent_gene": "", + "protein_md5": "d65578b90f9ff9693fd0afcf7c4d1870", + "protein_translation": "MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYINHNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013740" + ], + [ + "gene_synonym", + "ECK4196" + ], + [ + "gene_synonym", + "EcoGene:EG10905" + ], + [ + "gene_synonym", + "GI:296044035" + ], + [ + "gene_synonym", + "GeneID:948723" + ], + [ + "gene_synonym", + "JW4158" + ], + [ + "gene_synonym", + "NP_418621.5" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02358" + ], + [ + "gene_synonym", + "b4200" + ], + [ + "gene_synonym", + "rpsF" + ], + [ + "gene_synonym", + "sdgH" + ] + ], + "dna_sequence": "ATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCATGATCGAGCGCTACACTGCTGCCATCACTGGTGCAGAAGGCAAGATCCACCGTCTGGAAGACTGGGGCCGCCGTCAGCTGGCTTACCCGATCAACAAACTGCACAAAGCACACTACGTTCTGATGAATGTTGAAGCTCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAA", + "dna_sequence_length": 396, + "functions": [ + "30S ribosomal subunit protein S6" + ], + "id": "CDS_4119", + "location": [ + [ + "NC_000913", + 4425118, + "+", + 396 + ] + ], + "md5": "a0e90f736f7eacaf6ff3d453c7041487", + "parent_gene": "", + "protein_md5": "eb3b97ed13530ca6568258f44c46e3b4", + "protein_translation": "MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANETADDAEAGDSEE", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013742" + ], + [ + "gene_synonym", + "ECK4197" + ], + [ + "gene_synonym", + "EcoGene:EG10764" + ], + [ + "gene_synonym", + "GI:16132023" + ], + [ + "gene_synonym", + "GeneID:948722" + ], + [ + "gene_synonym", + "JW4159" + ], + [ + "gene_synonym", + "NP_418622.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07013" + ], + [ + "gene_synonym", + "b4201" + ], + [ + "gene_synonym", + "priB" + ] + ], + "dna_sequence": "ATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTCACTGCCAGTTCGTGCTTGAGCATCGTTCTGTGCAGGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGAGCAAAATGGTTTTGCATGCCGAGCAGATTGAATTGATAGATTCTGGAGACTAG", + "dna_sequence_length": 315, + "functions": [ + "primosomal protein N" + ], + "id": "CDS_4120", + "location": [ + [ + "NC_000913", + 4425520, + "+", + 315 + ] + ], + "md5": "f7aaed9926d187c2df8627bba0bd99e8", + "parent_gene": "", + "protein_md5": "6edf15e1fdbc576977f7feb455595874", + "protein_translation": "MTNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDSGD", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013744" + ], + [ + "gene_synonym", + "ECK4198" + ], + [ + "gene_synonym", + "EcoGene:EG10917" + ], + [ + "gene_synonym", + "GI:16132024" + ], + [ + "gene_synonym", + "GeneID:948721" + ], + [ + "gene_synonym", + "JW4160" + ], + [ + "gene_synonym", + "NP_418623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7T7" + ], + [ + "gene_synonym", + "b4202" + ], + [ + "gene_synonym", + "rpsR" + ] + ], + "dna_sequence": "ATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTCACCGCGGAAGGCGTTCAAGAGATCGACTATAAAGATATCGCTACGCTGAAAAACTACATCACCGAAAGCGGTAAGATTGTCCCAAGCCGTATCACCGGTACCCGTGCAAAATACCAGCGTCAGCTGGCTCGCGCTATCAAACGCGCTCGCTACCTGTCCCTGCTGCCGTACACTGATCGCCATCAGTAA", + "dna_sequence_length": 228, + "functions": [ + "30S ribosomal subunit protein S18" + ], + "id": "CDS_4121", + "location": [ + [ + "NC_000913", + 4425839, + "+", + 228 + ] + ], + "md5": "255b00d40d13bd3bdffec7634700bb54", + "parent_gene": "", + "protein_md5": "4d776f2becc435db4210658806b3f9df", + "protein_translation": "MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013746" + ], + [ + "gene_synonym", + "ECK4199" + ], + [ + "gene_synonym", + "EcoGene:EG10870" + ], + [ + "gene_synonym", + "GI:16132025" + ], + [ + "gene_synonym", + "GeneID:948720" + ], + [ + "gene_synonym", + "JW4161" + ], + [ + "gene_synonym", + "NP_418624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7R1" + ], + [ + "gene_synonym", + "b4203" + ], + [ + "gene_synonym", + "rplI" + ] + ], + "dna_sequence": "ATGCAAGTTATTCTGCTTGATAAAGTAGCAAACCTGGGTAGCCTGGGTGATCAGGTAAACGTTAAAGCGGGCTATGCTCGTAACTTCCTGGTACCGCAGGGTAAAGCTGTTCCAGCTACCAAGAAAAACATTGAATTCTTCGAAGCTCGTCGCGCTGAACTGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGTAACTGCAGCTGGCGTTGAAGTGGCTAAGAGCGAAGTTCGTCTGCCGAACGGCGTTCTGCGTACCACTGGCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAA", + "dna_sequence_length": 450, + "functions": [ + "50S ribosomal subunit protein L9" + ], + "id": "CDS_4122", + "location": [ + [ + "NC_000913", + 4426108, + "+", + 450 + ] + ], + "md5": "f0806f8499762f76c8d473b4436f0f6c", + "parent_gene": "", + "protein_md5": "32db77dafcb2b4bb72dcbe9329a202fe", + "protein_translation": "MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013748" + ], + [ + "gene_synonym", + "ECK4200" + ], + [ + "gene_synonym", + "EcoGene:EG12500" + ], + [ + "gene_synonym", + "GI:16132026" + ], + [ + "gene_synonym", + "GeneID:948719" + ], + [ + "gene_synonym", + "JW4162" + ], + [ + "gene_synonym", + "NP_418625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39308" + ], + [ + "gene_synonym", + "b4204" + ], + [ + "gene_synonym", + "yjfZ" + ] + ], + "dna_sequence": "ATGACATTACCAACGACTATTTATTCATTTCCTGCATATTTATCTCGTTTTTCGTCCACCGACAAACCAGTAAAATTAAAATTTCATCAATACGCACGCGCTACATTACTTTCAAATCGTGGAAGAGATCATAATTGCGATGGCAGACGTACTGTTGAGATCCACAAACTAGATCTCTCAGACTGGCAAGCATTCAATAAGTTAGCGACGAGGTGTAATGCTTACGATGGAATCACAATGAATGGTGATAATTCTTTTGGATGGAACCATGAAGCTACATTAGATAATATTCACGCCCAGAAATACAATAAAGCTTACGCGGGTGCGAGGTTAACCGCAGAACTGAAATATTTATTGCAAGATGTCGAATCCTTCGAACCCAACAGTAAATACACAATACACGAAGTGGTTTTGGGACCTGGTTATGGTACTCCAGACTATACCGGCCAAACGATAGGATACGTTGTAACCCTTCCTGCCCAAATGCCTAATTGCTGGTCATCTGAACTACCAACAATCGATCTTTATATCGACCAACTTCGCACTGTTACAGGCGTTTCTAATGCCCTCGGATTCATCATTGCTGCATTGCTAAACGCGTATTCTGATTTACCCCATGATTTGAAAATTGGTCTGCGTTCCTTATCAAGTTCAGCCGCAATCTACTCGGGTTTGGGTTTCGAGCGAGTGCCGCAGGAGCGAGACATCAGTTGCGCTCGTATGTATCTAACGCCAGCAAACCATCCTGACTTATGGACACAAGAGAATGGTGAATGGATCTACTTGCGAAACTAA", + "dna_sequence_length": 795, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4123", + "location": [ + [ + "NC_000913", + 4427422, + "-", + 795 + ] + ], + "md5": "efeefeefda6df545393e126119b68d4c", + "parent_gene": "", + "protein_md5": "ce8b68e5a0fc40ff61e65e961a41ee96", + "protein_translation": "MTLPTTIYSFPAYLSRFSSTDKPVKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATRCNAYDGITMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSSSAAIYSGLGFERVPQERDISCARMYLTPANHPDLWTQENGEWIYLRN", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013754" + ], + [ + "gene_synonym", + "ECK4201" + ], + [ + "gene_synonym", + "EcoGene:EG12501" + ], + [ + "gene_synonym", + "GeneID:948718" + ], + [ + "gene_synonym", + "JW4163" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39309" + ], + [ + "gene_synonym", + "b4205" + ], + [ + "gene_synonym", + "ytfA" + ] + ], + "dna_sequence": "CCACAAAAAGCCATTGAGAAAATTATTGATTTTACATGGGATTATTATATTGCTAATCCTTGGTTTTTAAAAATTGTGCATAGTGAAAATCAAAGTAAAGGTGTGCATTATGCAAAATCACAGCGTCTCTTAGAAATTAACCATGCGCACTTGCAGTTAATGGAATCCTTATTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCCCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAA", + "dna_sequence_length": 402, + "id": "CDS_4124", + "location": [ + [ + "NC_000913", + 4427694, + "+", + 402 + ] + ], + "md5": "ac3434a88559c9eec8b05de6fcb4f714", + "parent_gene": "", + "protein_md5": "4fddf8ee1e420fe2646214fdccdc5736", + "protein_translation": "PQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013756" + ], + [ + "gene_synonym", + "ECK4202" + ], + [ + "gene_synonym", + "EcoGene:EG12502" + ], + [ + "gene_synonym", + "GI:162135916" + ], + [ + "gene_synonym", + "GeneID:948727" + ], + [ + "gene_synonym", + "JW5745" + ], + [ + "gene_synonym", + "NP_418627.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39310" + ], + [ + "gene_synonym", + "b4206" + ], + [ + "gene_synonym", + "ytfB" + ] + ], + "dna_sequence": "ATGCCCGGGCGCTTTGAACTAAAACCAACCCTGGAGAAAGTCTGGCACGCGCCGGACAATTTTCGCTTCATGGACCCGCTGCCGCCGATGCATCGTCGGGGGATCATTATTGCCGCCATTGTATTGGTGGTCGGATTTCTGCTTCCATCTGATGATACGCCCAACGCGCCGGTGGTGACGCGTGAAGCGCAGTTAGATATTCAGTCGCAATCACAACCGCCGACAGAAGAACAGCTGCGGGCGCAATTAGTTACCCCACAAAATGATCCTGATCAGGTGGCTCCGGTCGCTCCAGAACCTATACAGGAAGGCCAGCCAGAAGAGCAGCCGCAAACTACCCAAACGCAACCATTCCAGCCAGATAGCGGAATTGATAATCAATGGCGCTCTTACCGTGTCGAACCCGGTAAAACGATGGCGCAGCTGTTCCGCGACCACGGACTGCCCGCTACCGATGTCTATGCAATGGCGCAGGTAGAAGGCGCGGGTAAGCCGCTGAGTAATTTGCAAAACGGGCAGATGGTGAAAATCCGCCAGAACGCCAGCGGCGTGGTGACGGGCTTAACCATTGATACGGGGAATAATCAACAGGTCCTGTTCACCCGCCAGCCGGATGGCAGTTTTATTCGTGCGCGGTAG", + "dna_sequence_length": 639, + "functions": [ + "OapA family protein" + ], + "id": "CDS_4125", + "location": [ + [ + "NC_000913", + 4428717, + "-", + 639 + ] + ], + "md5": "062d351ed375a6841b8ce72eb6b4ea83", + "parent_gene": "", + "protein_md5": "2299db4f837deecdc485bb8ca4942f99", + "protein_translation": "MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013759" + ], + [ + "gene_synonym", + "ECK4203" + ], + [ + "gene_synonym", + "EcoGene:EG12503" + ], + [ + "gene_synonym", + "GI:90111705" + ], + [ + "gene_synonym", + "GeneID:948726" + ], + [ + "gene_synonym", + "JW5746" + ], + [ + "gene_synonym", + "NP_418628.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9L3" + ], + [ + "gene_synonym", + "b4207" + ], + [ + "gene_synonym", + "fklB" + ], + [ + "gene_synonym", + "ytfC" + ] + ], + "dna_sequence": "ATGACCACCCCAACTTTTGACACCATCGAAGCGCAAGCAAGCTACGGCATTGGTTTGCAGGTAGGGCAACAACTGAGTGAATCTGGCCTGGAAGGGCTGCTGCCAGAAGCACTGGTTGCAGGTATTGCCGATGCGCTGGAAGGCAAACATCCGGCTGTTCCGGTTGATGTGGTGCATCGCGCGCTGCGTGAAATCCACGAGCGCGCCGATGCCGTTCGTCGTCAGCGTTTCCAGGCGATGGCTGCTGAAGGTGTGAAATACCTGGAAGAAAACGCCAAAAAAGAAGGTGTGAATAGCACCGAATCTGGCCTGCAATTCCGCGTGATCAACCAGGGTGAAGGCGCAATTCCGGCACGTACCGACCGCGTTCGTGTTCATTACACCGGTAAACTGATCGACGGCACCGTGTTTGACAGCTCCGTTGCTCGTGGTGAACCCGCTGAATTCCCGGTTAATGGCGTGATCCCTGGCTGGATTGAAGCACTGACTCTGATGCCGGTAGGTTCTAAATGGGAACTGACTATCCCGCAGGAACTGGCATATGGCGAGCGCGGCGCAGGCGCATCCATCCCTCCGTTCAGCACCCTGGTGTTTGAAGTCGAACTGCTGGAAATCCTCTAA", + "dna_sequence_length": 621, + "functions": [ + "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" + ], + "id": "CDS_4126", + "location": [ + [ + "NC_000913", + 4428935, + "+", + 621 + ] + ], + "md5": "8b973e2c365aebf49b75dfdb465a891f", + "parent_gene": "", + "protein_md5": "70d716e72e21ffc79d5aeaf73bac2f60", + "protein_translation": "MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013764" + ], + [ + "gene_synonym", + "ECK4204" + ], + [ + "gene_synonym", + "EcoGene:EG12504" + ], + [ + "gene_synonym", + "GI:16132030" + ], + [ + "gene_synonym", + "GeneID:948725" + ], + [ + "gene_synonym", + "JW4166" + ], + [ + "gene_synonym", + "NP_418629.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAE0" + ], + [ + "gene_synonym", + "b4208" + ], + [ + "gene_synonym", + "cycA" + ], + [ + "gene_synonym", + "dagA" + ], + [ + "gene_synonym", + "ytfD" + ] + ], + "dna_sequence": "ATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTATGGGGTCTGGCAAAACGATTAGCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATTGGTTTTATGCTCTTTTTCGTGATGCGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCGTGAAAATGTTCGGTGAGATGGAGTTCTGGTTTGCGATGATCAAAATCGTCGCCATTGTGTCGCTGATTGTCGTCGGCCTGGTCATGGTGGCGATGCACTTTCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACGCGCGATTAACTCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCGTCTTCTCTACCAGCCGTATGCTGTTTGGTCTGGCGCAGGAAGGTGTGGCACCGAAAGCGTTCGCTAAACTTTCTAAGCGCGCAGTACCCGCGAAAGGGCTGACGTTCTCGTGTATCTGTCTGCTCGGCGGCGTGGTGATGTTGTATGTGAATCCTAGTGTGATTGGCGCGTTCACGATGATTACAACCGTTTCCGCGATTCTGTTTATGTTCGTCTGGACGATTATCCTTTGCTCGTACCTTGTGTATCGCAAACAGCGTCCTCATCTACATGAGAAGTCGATCTACAAGATGCCGCTCGGCAAGCTGATGTGCTGGGTATGTATGGCGTTCTTTGTGTTCGTGGTCGTGTTGCTGACACTGGAAGATGACACTCGCCAGGCGCTGCTGGTTACCCCGCTGTGGTTTATCGCGCTGGGGTTGGGCTGGCTGTTTATTGGTAAGAAGCGGGCTGCTGAACTGCGGAAATAA", + "dna_sequence_length": 1413, + "functions": [ + "D-alanine/D-serine/glycine transporter" + ], + "id": "CDS_4127", + "location": [ + [ + "NC_000913", + 4429864, + "+", + 1413 + ] + ], + "md5": "7be4366a21be882b67db1047b4ecd79b", + "parent_gene": "", + "protein_md5": "0c625ea629b944a8bfa50967e063bd0c", + "protein_translation": "MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAELRK", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013766" + ], + [ + "gene_synonym", + "ECK4205" + ], + [ + "gene_synonym", + "EcoGene:EG12505" + ], + [ + "gene_synonym", + "GI:16132031" + ], + [ + "gene_synonym", + "GeneID:948724" + ], + [ + "gene_synonym", + "JW4167" + ], + [ + "gene_synonym", + "NP_418630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69506" + ], + [ + "gene_synonym", + "b4209" + ], + [ + "gene_synonym", + "dnrN" + ], + [ + "gene_synonym", + "ytfE" + ] + ], + "dna_sequence": "ATGGCTTATCGCGACCAACCTTTAGGTGAACTGGCGCTCTCTATTCCTCGCGCTTCAGCTCTGTTTCGTAAATATGATATGGATTACTGCTGTGGCGGTAAGCAGACGCTGGCGCGCGCGGCGGCACGTAAAGAACTGGATGTTGAGGTCATTGAAGCTGAACTGGCAAAGCTCGCTGAACAACCGATTGAGAAAGACTGGCGTAGCGCCCCGCTGGCAGAAATCATCGACCATATCATCGTGCGCTACCACGATCGTCACCGCGAGCAACTGCCGGAGCTGATTCTGCAAGCGACTAAAGTCGAGCGCGTTCACGCCGACAAACCGAGCGTGCCAAAAGGGCTGACAAAATACCTGACCATGCTGCATGAAGAGCTTTCCAGCCACATGATGAAAGAAGAGCAGATCCTCTTCCCGATGATCAAACAAGGCATGGGCAGCCAGGCAATGGGGCCAATCAGCGTAATGGAAAGCGAGCACGATGAAGCGGGCGAACTGCTGGAAGTGATTAAACACACCACCAATAACGTCACACCGCCGCCAGAAGCCTGCACCACCTGGAAAGCGATGTATAACGGCATTAATGAACTGATTGATGACCTGATGGATCACATCAGTCTGGAAAACAATGTACTGTTCCCACGCGCGCTGGCGGGTGAGTGA", + "dna_sequence_length": 663, + "functions": [ + "iron-sulfur cluster repair protein RIC" + ], + "id": "CDS_4128", + "location": [ + [ + "NC_000913", + 4431983, + "-", + 663 + ] + ], + "md5": "5b10cf9926ab519d12b45b3d194fc999", + "parent_gene": "", + "protein_md5": "e182e2eb845270a8bcbd1103a8acf778", + "protein_translation": "MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013769" + ], + [ + "gene_synonym", + "ECK4206" + ], + [ + "gene_synonym", + "EcoGene:EG12506" + ], + [ + "gene_synonym", + "GI:226524763" + ], + [ + "gene_synonym", + "GeneID:948732" + ], + [ + "gene_synonym", + "JW4168" + ], + [ + "gene_synonym", + "NP_418631.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39314" + ], + [ + "gene_synonym", + "b4210" + ], + [ + "gene_synonym", + "ytfF" + ] + ], + "dna_sequence": "ATGATTAGCGGCGTGCTGTACGCCCTGTTAGCAGGGTTGATGTGGGGGCTTATTTTTGTCGGGCCGTTGATCGTGCCGGAATACCCGGCGATGTTGCAGTCGATGGGGCGTTATCTGGCGTTAGGGTTAATTGCGCTGCCCATTGCCTGGCTGGGACGCGTGCGTCTGCGTCAGTTGGCGCGTCGCGACTGGCTTACCGCCTTGATGCTCACTATGATGGGCAACCTCATCTATTACTTCTGCCTTGCCAGTGCCATTCAACGTACTGGCGCGCCTGTTTCCACGATGATTATCGGCACCCTGCCGGTGGTCATTCCTGTCTTTGCCAATCTGCTTTATAGCCAGCGCGACGGCAAACTCGCGTGGGGAAAACTCGCCCCAGCACTGATTTGTATTGGCATCGGCCTGGCGTGTGTGAATATTGCTGAGTTAAACCACGGACTCCCCGATTTTGACTGGGCACGTTATACCTCTGGCATCGTGCTGGCGTTAGTTTCCGTGGTCTGCTGGGCGTGGTATGCCCTGCGCAACGCCCGCTGGCTGCGGGAAAATCCCGACAAACATCCGATGATGTGGGCAACAGCGCAGGCGCTGGTCACACTGCCGGTTTCACTTATCGGCTATCTCGTCGCTTGTTACTGGCTGAATACGCAAACGCCGGACTTCTCCCTACCCTTTGGCCCCCGTCCGCTGGTGTTTATTAGTCTGATGGTTGCGATAGCCGTGCTTTGCTCATGGGTTGGCGCACTCTGCTGGAACGTCGCCAGCCAGCTATTACCGACAGTGATTCTCGGGCCGCTGATTGTTTTCGAAACGCTGGCAGGTTTGCTGTACACCTTTTTACTCCGCCAGCAAATGCCGCCGCTAATGACGCTGAGCGGTATCGCGCTGTTAGTGATTGGCGTGGTCATCGCGGTCAGAGCAAAACCAGAAAAACCTTTAACTGAATCTGTCTCAGAAAGTTGA", + "dna_sequence_length": 966, + "functions": [ + "DMT transporter family inner membrane protein" + ], + "id": "CDS_4129", + "location": [ + [ + "NC_000913", + 4433056, + "-", + 966 + ] + ], + "md5": "bcd2cf8377f99cfafe21461d0e2a8ec7", + "parent_gene": "", + "protein_md5": "663f63bccd4e40451bef413ad6b74916", + "protein_translation": "MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKLAWGKLAPALICIGIGLACVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQTPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQLLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVIGVVIAVRAKPEKPLTESVSES", + "protein_translation_length": 321, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013773" + ], + [ + "gene_synonym", + "ECK4207" + ], + [ + "gene_synonym", + "EcoGene:EG12507" + ], + [ + "gene_synonym", + "GI:16132033" + ], + [ + "gene_synonym", + "GeneID:948731" + ], + [ + "gene_synonym", + "JW4169" + ], + [ + "gene_synonym", + "NP_418632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39315" + ], + [ + "gene_synonym", + "b4211" + ], + [ + "gene_synonym", + "qor2" + ], + [ + "gene_synonym", + "qorB" + ], + [ + "gene_synonym", + "ytfG" + ] + ], + "dna_sequence": "ATGATCGCTATTACTGGTGCCACTGGCCAACTTGGTCACTATGTTATTGAATCCTTGATGAAAACGGTTCCTGCCAGCCAAATAGTGGCTATCGTTCGTAATCCGGCAAAAGCCCAAGCCCTGGCAGCACAAGGCATTACCGTGCGTCAGGCTGACTACGGCGATGAAGCCGCACTGACATCTGCACTTCAGGGAGTGGAAAAACTACTGCTGATCTCTTCCAGCGAAGTGGGTCAACGTGCCCCGCAGCATCGTAATGTTATTAATGCCGCAAAGGCGGCTGGCGTGAAATTTATCGCTTATACCAGCCTGCTACATGCAGATACCTCCCCGCTCGGCCTCGCCGATGAGCACATCGAGACGGAGAAAATGCTGGCTGATTCTGGCATCGTTTACACCCTGCTGCGCAACGGCTGGTACAGCGAAAACTACCTCGCCAGCGCCCCGGCAGCACTGGAACACGGCGTATTTATCGGTGCGGCGGGCGATGGCAAAATCGCCTCAGCAACGCGGGCAGATTATGCGGCAGCTGCGGCACGCGTGATTAGCGAAGCCGGTCACGAAGGCAAGGTTTACGAACTGGCGGGCGATAGTGCCTGGACGTTGACACAGTTAGCGGCAGAGCTGACCAAACAGAGCGGCAAACAGGTTACCTATCAAAATCTGAGCGAAGCCGATTTCGCCGCGGCACTGAAAAGCGTCGGACTGCCCGACGGACTGGCGGATATGCTGGCGGATTCTGACGTTGGCGCATCGAAAGGCGGTCTGTTTGATGACAGCAAAACACTTAGCAAATTGATTGGCCACCCAACGACAACGTTAGCCGAAAGCGTAAGCCATCTTTTTAATGTTAATAACTAG", + "dna_sequence_length": 861, + "functions": [ + "NAD(P)H:quinone oxidoreductase" + ], + "id": "CDS_4130", + "location": [ + [ + "NC_000913", + 4434024, + "-", + 861 + ] + ], + "md5": "560e7a864648ce094e2a25644de9ea80", + "parent_gene": "", + "protein_md5": "49d6a9721b414222d55df6076d44f5eb", + "protein_translation": "MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013777" + ], + [ + "gene_synonym", + "ECK4208" + ], + [ + "gene_synonym", + "EcoGene:EG12508" + ], + [ + "gene_synonym", + "GI:90111706" + ], + [ + "gene_synonym", + "GeneID:948730" + ], + [ + "gene_synonym", + "JW5747" + ], + [ + "gene_synonym", + "NP_418633.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACN2" + ], + [ + "gene_synonym", + "b4212" + ], + [ + "gene_synonym", + "ytfH" + ] + ], + "dna_sequence": "ATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACACGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACAGGATGGTTTTCTTAACCGTATCGCGTATCCGGTGGTGCCGCCGCATGTGGAATATAGCCTCACGCCGCTGGGCGAGCAGGTGAGCGAAAAGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAA", + "dna_sequence_length": 381, + "functions": [ + "DUF24 family HxlR-type putative transcriptional regulator" + ], + "id": "CDS_4131", + "location": [ + [ + "NC_000913", + 4434113, + "+", + 381 + ] + ], + "md5": "0f365310e3ab31f56f30286bc3252c8a", + "parent_gene": "", + "protein_md5": "9d6fb40bfe2d23d847bfe783e5d17e90", + "protein_translation": "MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA", + "protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013782" + ], + [ + "gene_synonym", + "ECK4209" + ], + [ + "gene_synonym", + "EcoGene:EG10160" + ], + [ + "gene_synonym", + "GI:16132035" + ], + [ + "gene_synonym", + "GeneID:948729" + ], + [ + "gene_synonym", + "JW4171" + ], + [ + "gene_synonym", + "NP_418634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08331" + ], + [ + "gene_synonym", + "b4213" + ], + [ + "gene_synonym", + "cpdB" + ] + ], + "dna_sequence": "ATGATTAAGTTTAGCGCAACGCTCCTGGCCACGCTGATTGCCGCCAGTGTGAATGCAGCGACGGTCGATCTGCGTATCATGGAAACCACTGATCTGCATAGCAACATGATGGATTTCGATTATTACAAAGACACCGCCACGGAAAAATTCGGACTGGTACGTACGGCAAGCCTGATTAACGATGCCCGCAATGAAGTGAAAAACAGCGTACTGGTTGATAACGGCGATTTGATTCAGGGGAGTCCGCTGGCCGATTACATGTCGGCGAAAGGATTAAAAGCAGGTGATATTCACCCGGTCTATAAGGCATTAAATACGCTGGACTATACCGTCGGAACGCTTGGCAACCACGAGTTTAACTACGGTCTGGATTACCTGAAAAATGCGCTGGCAGGAGCGAAATTCCCTTATGTAAATGCCAACGTCATTGACGCCAGAACCAAACAGCCAATGTTTACACCGTATTTAATTAAAGACACCGAAGTGGTCGATAAAGACGGAAAAAAACAGACGCTGAAGATTGGCTATATTGGCGTCGTGCCACCACAAATCATGGGCTGGGATAAAGCTAATTTATCCGGGAAAGTGACGGTGAATGATATTACCGAAACCGTGCGCAAATACGTGCCTGAAATGCGCGAGAAAGGTGCCGATGTTGTTGTCGTTCTGGCACATTCCGGGCTATCTGCCGATCCGTATAAAGTGATGGCGGAAAACTCAGTTTATTACCTCAGTGAAATTCCGGGCGTTAACGCCATTATGTTTGGCCATGCTCACGCCGTTTTCCCAGGTAAAGATTTTGCTGATATCGAAGGGGCTGATATCGCCAAAGGCACGCTGAATGGTGTTCCGGCGGTAATGCCAGGCATGTGGGGCGATCATCTTGGTGTGGTCGACTTACAACTCAGTAATGACAGCGGTAAATGGCAGGTGACGCAGGCGAAAGCGGAAGCACGACCGATTTACGACATCGCTAATAAAAAATCCCTCGCGGCGGAAGACAGCAAGCTGGTAGAAACACTCAAAGCCGATCACGATGCCACACGCCAGTTCGTCAGCAAGCCAATCGGTAAATCTGCCGACAATATGTATAGCTATCTGGCGCTGGTGCAGGACGATCCGACCGTGCAGGTGGTGAACAACGCGCAAAAAGCGTATGTCGAGCATTACATTCAGGGCGATCCGGATCTGGCAAAACTGCCGGTGCTTTCAGCTGCCGCACCGTTTAAAGTCGGTGGTCGCAAAAATGACCCGGCAAGCTATGTGGAGGTGGAAAAAGGCCAGTTGACCTTCCGTAATGCCGCCGATCTTTATCTCTATCCCAATACGCTGATTGTGGTGAAAGCCAGCGGTAAAGAGGTGAAAGAGTGGCTGGAGTGCTCCGCGGGACAGTTTAACCAGATTGATCCCAACAGCACGAAACCACAGTCACTCATCAACTGGGATGGTTTCCGCACTTATAACTTTGATGTTATTGATGGTGTGAATTATCAGATTGATGTTACCCAGCCCGCCCGTTATGACGGCGAGTGCCAGATGATTAATGCCAATGCGGAAAGGATTAAGAACCTGACCTTTAATGGCAAGCCGATTGATCCGAACGCCATGTTCCTGGTTGCCACCAATAACTATCGCGCTTACGGCGGCAAATTTGCCGGTACGGGCGACAGCCATATCGCTTTTGCTTCACCGGATGAGAACCGCTCGGTGCTGGCAGCGTGGATTGCTGATGAGTCGAAACGTGCGGGGGAAATTCACCCGGCGGCAGATAACAACTGGCGTTTAGCACCGATAGCTGGCGATAAGAAACTGGATATCCGTTTCGAAACCTCTCCGTCAGATAAAGCCGCAGCGTTTATTAAAGAGAAAGGGCAGTATCCGATGAATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAA", + "dna_sequence_length": 1944, + "functions": [ + "2':3'-cyclic-nucleotide 2'-phosphodiesterase" + ], + "id": "CDS_4132", + "location": [ + [ + "NC_000913", + 4436565, + "-", + 1944 + ] + ], + "md5": "76cee67519e07ae15751f020cb3d2f2f", + "parent_gene": "", + "protein_md5": "6580839c18263456c463a24fc36a60dd", + "protein_translation": "MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK", + "protein_translation_length": 647, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013786" + ], + [ + "gene_synonym", + "ECK4210" + ], + [ + "gene_synonym", + "EcoGene:EG10043" + ], + [ + "gene_synonym", + "GI:16132036" + ], + [ + "gene_synonym", + "GeneID:948728" + ], + [ + "gene_synonym", + "JW4172" + ], + [ + "gene_synonym", + "NP_418635.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22255" + ], + [ + "gene_synonym", + "amt" + ], + [ + "gene_synonym", + "amtA" + ], + [ + "gene_synonym", + "b4214" + ], + [ + "gene_synonym", + "cysQ" + ] + ], + "dna_sequence": "ATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTCCCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACCCGCGCTTCGGACCAACGAATATTTGGGACACCGCCGCTGGACATGCTGTAGCTGCAGCTGCCGGAGCGCACGTTCACGACTGGCAGGGTAAACCGCTGGATTACACTCCGCGTGAGTCGTTCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAA", + "dna_sequence_length": 741, + "functions": [ + "3'(2'),5'-bisphosphate nucleotidase" + ], + "id": "CDS_4133", + "location": [ + [ + "NC_000913", + 4436755, + "+", + 741 + ] + ], + "md5": "e45bacb45429e82f85e5ba16ec57926e", + "parent_gene": "", + "protein_md5": "347fa5f1329d7667423d4c5873cd8b63", + "protein_translation": "MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013790" + ], + [ + "gene_synonym", + "ECK4211" + ], + [ + "gene_synonym", + "EcoGene:EG12509" + ], + [ + "gene_synonym", + "GI:49176474" + ], + [ + "gene_synonym", + "GeneID:948738" + ], + [ + "gene_synonym", + "JW5748" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39317" + ], + [ + "gene_synonym", + "YP_026285.1" + ], + [ + "gene_synonym", + "b4215" + ], + [ + "gene_synonym", + "ytfI" + ] + ], + "dna_sequence": "ATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAGCAAATTAAAACGGGGTAAATTTGAACTCCAAATACCAGGAGGTGGAATTAAAGAATGCGATGGATGGTATATTTACGAAAAAATAATTGATGATAATTTTGCCATAGTCATAGAATCTTTGGGCTTTGCGCTTAAAATCTATGGAGGGGATGAACGTTTTCGTAATGGTTCCTCTGTTGTTTTGGAGGATGAAGATTACTCTCTTATTTATAATTTTCTGGTTAATGCAGGTTGCCAACAAGTCGAATTAGCCGAACAAGTGGATGCGATAGTAAGTGCGAATCTGGCCGCAGATAGCGATATTACCAAAGAAAAGATTTGCGAGAAATATAAATCGACCATTGAGGCGTTTAAAAAAGAGCAACTAGCGTTACCAGTATTAGTTCGGCGTAAGAACTCAGAGACTTAA", + "dna_sequence_length": 939, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4134", + "location": [ + [ + "NC_000913", + 4437707, + "+", + 939 + ] + ], + "md5": "5c786bd88e5ee49a9f54a8af5de78c42", + "parent_gene": "", + "protein_md5": "f6148e0cc56bc9efbb6c5f5ea5cd2a4c", + "protein_translation": "MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013792" + ], + [ + "gene_synonym", + "ECK4212" + ], + [ + "gene_synonym", + "EcoGene:EG12510" + ], + [ + "gene_synonym", + "GI:16132038" + ], + [ + "gene_synonym", + "GeneID:948737" + ], + [ + "gene_synonym", + "JW4175" + ], + [ + "gene_synonym", + "NP_418637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39187" + ], + [ + "gene_synonym", + "b4216" + ], + [ + "gene_synonym", + "ecfJ" + ], + [ + "gene_synonym", + "ytfJ" + ] + ], + "dna_sequence": "ATGACCCTACGCAAGATTCTGGCACTCACCTGCCTGCTGTTGCCGATGATGGCTTCCGCACATCAGTTCGAAACCGGTCAGCGAGTGCCGCCGATTGGCATTACCGATCGGGGCGAGTTGGTGCTTGATAAAGATCAGTTTAGCTACAAAACCTGGAACAGCGCGCAGTTAGTGGGAAAAGTGCGAGTACTGCAACATATTGCTGGTCGCACCTCTGCAAAAGAGAAAAACGCGACGCTGATTGAAGCGATTAAATCAGCGAAGTTACCGCACGATCGTTACCAGACCACCACCATTGTTAACACCGACGACGCGATTCCGGGTTCAGGGATGTTTGTGCGCAGCAGTCTGGAGAGTAATAAAAAGCTTTATCCCTGGTCGCAGTTTATTGTCGATAGCAATGGCGTCGCGCTCGGTGCCTGGCAGCTGGATGAAGAAAGTTCCGCTGTAGTGGTGCTGGATAAGGATGGTCGCGTGCAATGGGCCAAAGACGGGGCGCTCACACCGGAAGAGGTGCAGCAAGTGATGGACCTGCTGCAAAAGTTGCTCAAATAA", + "dna_sequence_length": 555, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4135", + "location": [ + [ + "NC_000913", + 4439262, + "-", + 555 + ] + ], + "md5": "a637e28ba001284285ef70eda9a6f162", + "parent_gene": "", + "protein_md5": "f8eb7acc179b506e41e4e914ad78684f", + "protein_translation": "MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013797" + ], + [ + "gene_synonym", + "ECK4213" + ], + [ + "gene_synonym", + "EcoGene:EG12511" + ], + [ + "gene_synonym", + "GI:90111707" + ], + [ + "gene_synonym", + "GeneID:948736" + ], + [ + "gene_synonym", + "JW5749" + ], + [ + "gene_synonym", + "NP_418638.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE2" + ], + [ + "gene_synonym", + "b4217" + ], + [ + "gene_synonym", + "ytfK" + ] + ], + "dna_sequence": "ATGAAAATTTTCCAACGGTACAACCCACTTCAGGTGGCGAAGTACGTAAAGATCCTGTTCCGTGGACGGTTATACATCAAGGACGTTGGCGCTTTTGAATTCGATAAGGGTAAGATTCTTATCCCAAAAGTGAAGGATAAGCTGCATTTGTCAGTGATGTCCGAAGTTAACCGTCAGGTTATGCGTCTGCAAACAGAGATGGCTTAA", + "dna_sequence_length": 207, + "functions": [ + "DUF1107 family protein" + ], + "id": "CDS_4136", + "location": [ + [ + "NC_000913", + 4439587, + "+", + 207 + ] + ], + "md5": "6a0a73b2a7d78259c4e9b812ab561e3c", + "parent_gene": "", + "protein_md5": "6368f0cdf1a01dc384e1c2397a7d71e6", + "protein_translation": "MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEMA", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013799" + ], + [ + "gene_synonym", + "ECK4214" + ], + [ + "gene_synonym", + "EcoGene:EG12512" + ], + [ + "gene_synonym", + "GI:16132040" + ], + [ + "gene_synonym", + "GeneID:948735" + ], + [ + "gene_synonym", + "JW4177" + ], + [ + "gene_synonym", + "NP_418639.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE45" + ], + [ + "gene_synonym", + "b4218" + ], + [ + "gene_synonym", + "ytfL" + ] + ], + "dna_sequence": "ATGTTAAACAGTATTTTAGTCATACTCTGCTTGATCGCTGTAAGTGCGTTCTTCTCGATGTCCGAGATCTCGCTTGCCGCCTCACGCAAAATCAAACTTAAACTGCTGGCTGATGAAGGCAATATAAATGCCCAACGCGTTCTGAATATGCAGGAAAATCCCGGCATGTTCTTTACCGTGGTCCAAATCGGTCTGAACGCAGTGGCGATTCTCGGCGGTATCGTCGGTGATGCGGCATTTTCTCCAGCTTTTCACAGCCTGTTCTCCCGCTATATGTCGGCAGAGCTCTCTGAGCAACTGAGCTTTATTCTCTCTTTCTCGTTAGTGACTGGCATGTTTATCCTGTTTGCGGATTTAACCCCGAAACGCATCGGTATGATTGCGCCAGAAGCTGTGGCTTTGCGTATCATCAACCCGATGCGCTTCTGCCTGTACGTTTGCACCCCGCTGGTGTGGTTCTTCAACGGCCTGGCGAACATAATCTTCCGTATTTTCAAACTGCCAATGGTACGTAAAGATGACATCACTTCTGATGACATCTACGCGGTAGTGGAAGCCGGTGCGCTGGCGGGCGTGTTACGTAAACAGGAACACGAGCTGATTGAAAACGTCTTTGAGCTGGAATCCCGTACCGTTCCGTCTTCAATGACACCGCGTGAAAACGTGATTTGGTTTGATCTCCACGAAGATGAGCAAAGCCTGAAGAATAAGGTGGCGGAACATCCGCACTCTAAGTTCCTCGTCTGTAATGAAGATATTGACCACATCATCGGTTATGTCGATTCTAAAGACCTGCTGAACCGCGTGCTGGCTAACCAAAGCCTGGCACTGAACAGCGGCGTACAAATTCGCAACACGCTGATTGTGCCGGATACGTTAACCCTTTCAGAGGCGTTGGAAAGTTTTAAAACCGCAGGTGAAGACTTCGCGGTGATCATGAACGAGTACGCGCTGGTGGTGGGGATCATCACCCTCAATGACGTGATGACCACGCTGATGGGCGATCTGGTCGGTCAGGGGCTGGAAGAGCAGATTGTCGCCCGTGATGAGAACTCATGGCTGATTGACGGCGGCACCCCAATTGACGACGTCATGCGCGTGCTGGATATTGACGAGTTCCCGCAGTCGGGCAACTACGAAACCATCGGCGGCTTTATGATGTTTATGCTGCGTAAGATCCCGAAACGCACCGATTCGGTGAAATTCGCCGGCTACAAATTTGAAGTGGTGGATATCGATAACTACCGCATCGACCAGCTGCTGGTGACCCGGATCGACAGCAAGGCCACCGCCCTTTCGCCAAAACTGCCTGACGCTAAAGATAAAGAAGAAAGCGTCGCGTAA", + "dna_sequence_length": 1344, + "functions": [ + "UPF0053 family inner membrane protein" + ], + "id": "CDS_4137", + "location": [ + [ + "NC_000913", + 4441215, + "-", + 1344 + ] + ], + "md5": "bfe5a3e973db4cfb51ac8f92de79d34b", + "parent_gene": "", + "protein_md5": "5e17a86516a0e922489aad67242b433d", + "protein_translation": "MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013804" + ], + [ + "gene_synonym", + "ECK4215" + ], + [ + "gene_synonym", + "EcoGene:EG11433" + ], + [ + "gene_synonym", + "GI:16132041" + ], + [ + "gene_synonym", + "GeneID:948734" + ], + [ + "gene_synonym", + "JW4178" + ], + [ + "gene_synonym", + "NP_418640.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A744" + ], + [ + "gene_synonym", + "b4219" + ], + [ + "gene_synonym", + "msrA" + ], + [ + "gene_synonym", + "pms" + ], + [ + "gene_synonym", + "pmsR" + ] + ], + "dna_sequence": "ATGAGTTTATTTGATAAAAAGCATCTGGTTTCCCCCGCCGATGCCCTGCCTGGACGTAACACCCCGATGCCCGTAGCCACGCTGCATGCGGTCAACGGTCACTCAATGACCAATGTACCTGACGGAATGGAGATTGCCATTTTTGCGATGGGTTGTTTCTGGGGTGTGGAGCGTCTGTTCTGGCAGTTACCCGGCGTTTACAGCACCGCCGCAGGCTATACCGGCGGCTATACGCCAAATCCGACTTATCGGGAAGTGTGCTCCGGTGATACGGGTCATGCCGAAGCGGTACGCATTGTTTACGATCCTTCCGTCATCAGCTATGAGCAGTTGCTACAGGTATTTTGGGAGAATCACGATCCCGCCCAGGGAATGCGTCAGGGCAATGACCACGGCACGCAGTATCGTTCAGCGATTTATCCGCTGACCCCAGAACAGGATGCCGCAGCTCGCGCCAGTCTGGAACGTTTTCAGGCGGCGATGCTTGCCGCCGATGACGATCGTCACATCACCACGGAAATCGCTAACGCCACACCGTTTTATTATGCCGAAGATGACCACCAGCAATATCTGCATAAAAACCCGTATGGTTACTGTGGAATTGGCGGAATTGGCGTCTGTCTGCCGCCGGAAGCATAG", + "dna_sequence_length": 639, + "functions": [ + "methionine sulfoxide reductase A" + ], + "id": "CDS_4138", + "location": [ + [ + "NC_000913", + 4442176, + "-", + 639 + ] + ], + "md5": "c422c2d84d4abe1fd58b21155cb1701f", + "parent_gene": "", + "protein_md5": "1c82e6ec7a4b5dfe9ddcca7d3d440604", + "protein_translation": "MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013809" + ], + [ + "gene_synonym", + "ECK4216" + ], + [ + "gene_synonym", + "EcoGene:EG12513" + ], + [ + "gene_synonym", + "GI:16132042" + ], + [ + "gene_synonym", + "GeneID:948733" + ], + [ + "gene_synonym", + "JW4179" + ], + [ + "gene_synonym", + "NP_418641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE4" + ], + [ + "gene_synonym", + "b4220" + ], + [ + "gene_synonym", + "tamA" + ], + [ + "gene_synonym", + "yftM" + ], + [ + "gene_synonym", + "ytfM" + ] + ], + "dna_sequence": "GTGCGCTATATCCGACAGTTATGCTGTGTAAGCTTACTCTGCTTAAGCGGATCTGCCGTCGCCGCGAACGTCCGTCTACAGGTCGAGGGGTTATCGGGACAGCTGGAAAAGAACGTTCGTGCGCAGCTTTCTACGATTGAAAGTGATGAAGTGACGCCAGACCGTCGCTTTCGCGCACGCGTCGATGATGCCATCCGCGAAGGTCTGAAAGCGCTGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTACGAATCGAAAGATCTGGCAGAACTGAACCGCCGACTTTCTGCTACCGGCTGGTTTAACTCGGTGGTGGTGGCTCCACAATTTGATAAAGCGCGCGAAACGAAAGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTACCAATACCACGATGCTGTTTTATCCTGGGGTGATGATTAGCCGCACGCGTTCTCGTGGTGGCCTGATGCCAACCTGGGGCGACTCGCAACGCTACTCTATCGACTACTCCAACACGGCCTGGGGTTCAGATGTCGATTTCTCCGTTTTCCAGGCGCAGAACGTCTGGATCCGCACACTGTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGA", + "dna_sequence_length": 1734, + "functions": [ + "translocation and assembly module for autotransporter export, outer membrane subunit" + ], + "id": "CDS_4139", + "location": [ + [ + "NC_000913", + 4442382, + "+", + 1734 + ] + ], + "md5": "3355eb262e44e35a68b650e8d096fdb2", + "parent_gene": "", + "protein_md5": "de42c3b313ef6a88f2affccbe7bbd7ed", + "protein_translation": "MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL", + "protein_translation_length": 577, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013811" + ], + [ + "gene_synonym", + "ECK4217" + ], + [ + "gene_synonym", + "EcoGene:EG12514" + ], + [ + "gene_synonym", + "GI:16132043" + ], + [ + "gene_synonym", + "GeneID:948742" + ], + [ + "gene_synonym", + "JW4180" + ], + [ + "gene_synonym", + "NP_418642.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39321" + ], + [ + "gene_synonym", + "b4221" + ], + [ + "gene_synonym", + "tamB" + ], + [ + "gene_synonym", + "ytfN" + ], + [ + "gene_synonym", + "ytfO" + ] + ], + "dna_sequence": "ATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTGGCAGATGGACGTGCCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGAAACTCGACGTACGCGTTGAGCAAATTTCGCAGCCGGATGTAAATATCAACCTCGTCACCCTGAATGCCAAAGGCAGCGAAAAGCAGCACGAGCTACAGTTGCGGATTCAGGGGGAGCCTGTCTCCGGGCAGCTTAATCTGGCAGGAAGTTTTGATCGCAAAGAAGAACGCTGGAAGGGAACTCTTAGCAATACCCGCTTCCAGACGCCGGTTGGCCCGTGGTCGCTGACCCGCGATATTGCGCTGGATTACCGCAATAAGGAGCAAAAAATCAGCATCGGGCCACACTGCTGGCTTAACCCGAATGCGGAACTGTGCGTGCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGAGGGGCTGCCGCAGGGCAGTATCACCCTTTCGGGGCGTAACGTGCAGGTAACGCAAACCGTCAACGATGCGGCGCTGCCCGTGGCGTTTCAGACACTGAATCTGACGGCGGAATTGCGTAACAACCGTGCCGAATTGGGCTGGACCATCCGCCTGACCAATAACGGCCAGTTTGATGGACAGGTGCAGGTGACCGATCCGCAAGGCCGCCGTAATCTTGGTGGCAACGTCAATATCCGTAACTTCAACCTTGCGATGATAAACCCCATCTTTACCCGTGGGGAAAAAGCAGCGGGGATGGTGAGTGCCAACTTGCGTCTGGGTGGTGATGTGCAAAGCCCGCAGTTGTTTGGTCAGCTTCAGGTTACGGGTGTGGATATCGATGGCAACTTTATGCCGTTTGATATGCAACCGAGCCAGCTTGCGGTCAACTTTAACGGTATGCGCTCGACGCTTGCCGGTACAGTACGGACCCAGCAGGGTGAAATCTACCTGAACGGTGATGCCGACTGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGGGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGATCTTCTCTGACCCGGCGATGTCGCAACAAGCTGCCTTGTCTTATTTGCTACGTGGACAAGGGCTGGAGAGCGATCAGAGCGACAGTGCGGCAATGACCTCGATGCTGATTGGTTTGGGGGTTGCGCAAAGTGGCCAGATTGTGGGTAAAATCGGCGAGACGTTTGGCGTAAGCAATTTAGCGCTCGACACCCAGGGAGTAGGCGACTCCTCCCAGGTAGTGGTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTTGCTCTATCAGTTCGAGTTTTAG", + "dna_sequence_length": 3780, + "functions": [ + "translocation and assembly module for autotransporter export, inner membrane subunit" + ], + "id": "CDS_4140", + "location": [ + [ + "NC_000913", + 4444112, + "+", + 3780 + ] + ], + "md5": "d04e211330857ba4b0b9f248dd2027b2", + "parent_gene": "", + "protein_md5": "ab9f35ff31ea84b1cc7329dc6b7a0d73", + "protein_translation": "MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEFKGEQLRVTGDTDITVSTMLLKVSSIDGNTKLDALDIDSSQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKMGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEFPDWPSKLNGLIKTRGSLYGGTWQMDVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF", + "protein_translation_length": 1259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013814" + ], + [ + "gene_synonym", + "ECK4218" + ], + [ + "gene_synonym", + "EcoGene:EG12516" + ], + [ + "gene_synonym", + "GI:16132044" + ], + [ + "gene_synonym", + "GeneID:948741" + ], + [ + "gene_synonym", + "JW4181" + ], + [ + "gene_synonym", + "NP_418643.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE48" + ], + [ + "gene_synonym", + "b4222" + ], + [ + "gene_synonym", + "ytfP" + ] + ], + "dna_sequence": "ATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGCCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGATAAGTAA", + "dna_sequence_length": 342, + "functions": [ + "GGCT-like protein" + ], + "id": "CDS_4141", + "location": [ + [ + "NC_000913", + 4447894, + "+", + 342 + ] + ], + "md5": "8ddabaf532d3985eecf823707bc95d17", + "parent_gene": "", + "protein_md5": "ef23aa39d7fa5e452a998421f0e9cd7d", + "protein_translation": "MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAVPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKLIESGDWLDRDK", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013820" + ], + [ + "gene_synonym", + "ECK4220" + ], + [ + "gene_synonym", + "EcoGene:EG11250" + ], + [ + "gene_synonym", + "GI:90111708" + ], + [ + "gene_synonym", + "GeneID:948739" + ], + [ + "gene_synonym", + "JW5750" + ], + [ + "gene_synonym", + "NP_418645.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08365" + ], + [ + "gene_synonym", + "b4224" + ], + [ + "gene_synonym", + "chpBI" + ], + [ + "gene_synonym", + "chpS" + ], + [ + "gene_synonym", + "yjfB" + ] + ], + "dna_sequence": "ATGCGTATTACCATAAAAAGATGGGGGAACAGTGCAGGTATGGTCATTCCCAATATCGTAATGAAAGAACTTAACTTACAGCCGGGGCAGAGCGTGGAGGCGCAAGTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAA", + "dna_sequence_length": 252, + "functions": [ + "antitoxin of the ChpBS toxin-antitoxin system" + ], + "id": "CDS_4142", + "location": [ + [ + "NC_000913", + 4448447, + "+", + 252 + ] + ], + "md5": "41d550bdfdd167fa5533187ff6436096", + "parent_gene": "", + "protein_md5": "51dcac77b3730d98af907e16a9b8d2bf", + "protein_translation": "MRITIKRWGNSAGMVIPNIVMKELNLQPGQSVEAQVSNNQLILTPISRRYSLDELLAQCDMNAAELSEQDVWGKSTPAGDEIW", + "protein_translation_length": 83, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013822" + ], + [ + "gene_synonym", + "ECK4221" + ], + [ + "gene_synonym", + "EcoGene:EG12096" + ], + [ + "gene_synonym", + "GI:16132047" + ], + [ + "gene_synonym", + "GeneID:948747" + ], + [ + "gene_synonym", + "JW4184" + ], + [ + "gene_synonym", + "NP_418646.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33647" + ], + [ + "gene_synonym", + "b4225" + ], + [ + "gene_synonym", + "chpB" + ], + [ + "gene_synonym", + "chpBK" + ], + [ + "gene_synonym", + "yjfE" + ] + ], + "dna_sequence": "ATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAA", + "dna_sequence_length": 351, + "functions": [ + "toxin of the ChpB-ChpS toxin-antitoxin system" + ], + "id": "CDS_4143", + "location": [ + [ + "NC_000913", + 4448692, + "+", + 351 + ] + ], + "md5": "f69ca1d5c5a805052f1b501066247a0f", + "parent_gene": "", + "protein_md5": "5b0045c277da925555f72981611dd9f7", + "protein_translation": "MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAPITQGGNFARYAGFSVPLHCEEGDVHGVVLVNQVRMMDLHARLAKRIGLAADEVVEEALLRLQAVVE", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013824" + ], + [ + "gene_synonym", + "ECK4222" + ], + [ + "gene_synonym", + "EcoGene:EG10755" + ], + [ + "gene_synonym", + "GI:16132048" + ], + [ + "gene_synonym", + "GeneID:948748" + ], + [ + "gene_synonym", + "JW4185" + ], + [ + "gene_synonym", + "NP_418647.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7A9" + ], + [ + "gene_synonym", + "b4226" + ], + [ + "gene_synonym", + "ppa" + ] + ], + "dna_sequence": "ATGAGCTTACTCAACGTCCCTGCGGGTAAAGATCTGCCGGAAGACATCTACGTTGTTATTGAGATCCCGGCTAACGCAGATCCGATCAAATACGAAATCGACAAAGAGAGCGGCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTGACGTACTGGTCCCAACTCCGTACCCGCTGCAGCCGGGTTCTGTGATCCGTTGCCGTCCGGTTGGCGTTCTGAAAATGACCGACGAAGCCGGTGAAGATGCGAAACTGGTTGCGGTTCCGCACAGCAAGCTGAGCAAAGAATACGATCACATTAAAGACGTTAACGATCTGCCTGAACTGCTGAAAGCGCAAATCGCTCACTTCTTCGAGCACTACAAAGACCTCGAAAAAGGCAAGTGGGTGAAAGTTGAAGGTTGGGAAAACGCAGAAGCCGCTAAAGCTGAAATCGTTGCCTCCTTCGAGCGCGCAAAGAATAAATAA", + "dna_sequence_length": 531, + "functions": [ + "inorganic pyrophosphatase" + ], + "id": "CDS_4144", + "location": [ + [ + "NC_000913", + 4449652, + "-", + 531 + ] + ], + "md5": "f9816d41af005a9853f61795c922f729", + "parent_gene": "", + "protein_md5": "108cc7936765946bc5b79ea261151b2d", + "protein_translation": "MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013829" + ], + [ + "gene_synonym", + "ECK4223" + ], + [ + "gene_synonym", + "EcoGene:EG12517" + ], + [ + "gene_synonym", + "GI:16132049" + ], + [ + "gene_synonym", + "GeneID:948746" + ], + [ + "gene_synonym", + "JW4186" + ], + [ + "gene_synonym", + "NP_418648.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39325" + ], + [ + "gene_synonym", + "b4227" + ], + [ + "gene_synonym", + "ytfQ" + ] + ], + "dna_sequence": "ATGTGGAAACGCTTACTTATAGTCTCTGCAGTCTCGGCAGCCATGTCGTCTATGGCGTTGGCCGCTCCATTAACCGTTGGATTTTCGCAGGTCGGATCGGAATCAGGCTGGCGTGCCGCAGAAACCAATGTGGCGAAAAGTGAAGCCGAAAAGCGCGGAATCACGTTGAAAATTGCCGATGGTCAGCAAAAGCAGGAAAACCAGATTAAAGCGGTACGTTCCTTCGTTGCACAAGGGGTGGATGCGATCTTTATCGCTCCGGTGGTCGCGACAGGTTGGGAACCGGTATTAAAAGAGGCGAAAGATGCCGAAATCCCGGTATTCTTGCTCGATCGTTCCATTGATGTGAAAGACAAATCTCTCTATATGACCACCGTCACTGCCGACAACATCCTCGAAGGCAAGTTGATTGGTGACTGGCTGGTAAAAGAAGTGAATGGCAAACCATGCAACGTGGTGGAGCTGCAGGGCACCGTTGGGGCCAGCGTCGCCATTGACCGTAAGAAAGGCTTTGCCGAAGCCATTAAGAATGCGCCAAATATCAAAATCATCCGCTCGCAGTCAGGTGACTTCACCCGCAGTAAAGGCAAAGAAGTCATGGAGAGCTTTATCAAAGCGGAAAACAACGGCAAAAACATCTGCATGGTTTACGCCCATAACGACGACATGGTGATTGGTGCAATTCAGGCAATTAAAGAAGCGGGCCTGAAACCGGGCAAAGATATCCTCACGGGTTCCATTGACGGTGTACCGGACATCTACAAAGCGATGATGGATGGCGAAGCGAACGCCAGTGTTGAACTGACGCCGAATATGGCAGGTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGA", + "dna_sequence_length": 957, + "functions": [ + "galactofuranose ABC transporter periplasmic binding protein" + ], + "id": "CDS_4145", + "location": [ + [ + "NC_000913", + 4449962, + "+", + 957 + ] + ], + "md5": "9fbc7fd5292ea8fd9b07d184c3688ba2", + "parent_gene": "", + "protein_md5": "9e2aad1c75e88a3db508aa845635d7b7", + "protein_translation": "MWKRLLIVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMMDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174118" + ], + [ + "gene_synonym", + "ECK4224" + ], + [ + "gene_synonym", + "EcoGene:EG12518" + ], + [ + "gene_synonym", + "GI:49176475" + ], + [ + "gene_synonym", + "GeneID:2847725" + ], + [ + "gene_synonym", + "JW5752" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BEX0" + ], + [ + "gene_synonym", + "YP_026286.1" + ], + [ + "gene_synonym", + "b4485" + ], + [ + "gene_synonym", + "ytfR" + ], + [ + "gene_synonym", + "ytfS" + ] + ], + "dna_sequence": "ATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAAAAGCGCGCCACCGAACTGATGGCATCTTACGGTTTCTCCCTCGACGTGCGCGAACCGCTCAACCGCTTTTCAGTCGCGATGCAGCAAATCGTCGCTATTTGTCGGGCTATCGATCTCTCTGCCAAAGTGCTGATCCTCGATGAACCCACCGCCAGTCTCGACACCCAGGAAGTGGAGTTACTGTTTGACCTGATGCGTCAGTTGCGCGATCGCGGCGTCAGCCTGATTTTTGTCACTCACTTTCTCGATCAGGTCTATCAGGTCAGCGATCGGATCACCGTCTTACGCAACGGCAGTTTCGTAGGCTGTCGGGAAACGTGCGAGCTACCGCAGATCGAACTGGTAAAAATGATGCTGGGGCGCGAGCTGGATACCCACGCGCTACAGCGTGCCGGGCGAACATTGTTGAGCGACAAACCCGTTGCCGCGTTCAAAAATTACGGCAAAAAAGGAACGATCGCACCGTTTGATCTCGAAGTACGCCCCGGCGAGATCGTCGGTCTGGCTGGATTGCTGGGATCAGGACGTACCGAAACCGCCGAAGTGATCTTCGGTATCAAACCTGCTGACAGCGGCACGGCGTTGATCAAAGGCAAACCGCAAAACCTGCGATCGCCACATCAGGCTTCGGTACTGGGCATTGGCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATTGAATTTCTCTCCGGCGGCAATCAGCAAAAAGTGTTGCTTTCACGTTGGCTACTGACCCGACCGCAATTTCTGATCCTCGATGAGCCAACCCGCGGCATTGATGTTGGTGCCCACGCCGAGATCATCCGCCTGATTGAAACGCTATGCGCCGATGGTCTGGCGCTGCTGGTGATCTCCTCCGAACTGGAAGAGCTGGTGGGCTATGCCGATCGGGTGATTATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCAGAGCTTTCCGTTCCGGCGATCATGAACGCCATTGCGGCGTAA", + "dna_sequence_length": 1503, + "functions": [ + "putative sugar ABC transporter ATPase" + ], + "id": "CDS_4146", + "location": [ + [ + "NC_000913", + 4451058, + "+", + 1503 + ] + ], + "md5": "52c60611a055d5155dac106535e163c1", + "parent_gene": "", + "protein_md5": "9df0d4edd067a9b949850e1d5794f056", + "protein_translation": "MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013838" + ], + [ + "gene_synonym", + "ECK4225" + ], + [ + "gene_synonym", + "EcoGene:EG12520" + ], + [ + "gene_synonym", + "GI:145698343" + ], + [ + "gene_synonym", + "GeneID:948743" + ], + [ + "gene_synonym", + "JW5753" + ], + [ + "gene_synonym", + "NP_418651.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39328" + ], + [ + "gene_synonym", + "b4230" + ], + [ + "gene_synonym", + "ytfT" + ] + ], + "dna_sequence": "GTGATGCCTCAATCTCTTCCGGACACCACTACGCCAAAAAGGCGCTTTCGCTGGCCGACGGGGATGCCGCAGCTGGTAGCACTATTGCTGGTGCTGCTGGTCGATAGCCTGGTAGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCGGTAGCCCCATAGACATTCTTAACCGTGCAGCTCCCGTTGCGTTACTGGCGATTGGCATGACGCTGGTGATCGCCACCGGTGGGATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCTGCCGATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAATTCAGCCGTTTGTCGCCACTCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTCACGTTTAACTCGCCGGATCTCTCATGGTTCGGCAGTGGATCGCTGTTGTTCCTGCCAACGCCGGTCATTATCGCGGTGCTGACGCTTATCCTGTTCTGGCTGTTGACCCGCAAAACGGCGCTGGGGATGTTTATCGAAGCCGTTGGTATCAACATTCGGGCGGCAAAAAATGCCGGGGTAAACACGCGAATCATCGTCATGCTCACTTATGTGTTGAGCGGGCTGTGTGCGGCGATTGCGGGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCTGGGTTATGGCTGGAGCTGGACGCCATTCTCGCGGTGGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAA", + "dna_sequence_length": 1026, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_4147", + "location": [ + [ + "NC_000913", + 4452571, + "+", + 1026 + ] + ], + "md5": "970062937705fbcd2ab6d38f6cc0bae5", + "parent_gene": "", + "protein_md5": "6cf13b3749df8bbc4331bb8f0975e276", + "protein_translation": "MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPTPVIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013840" + ], + [ + "gene_synonym", + "ECK4226" + ], + [ + "gene_synonym", + "EcoGene:EG12439" + ], + [ + "gene_synonym", + "GI:90111710" + ], + [ + "gene_synonym", + "GeneID:948754" + ], + [ + "gene_synonym", + "JW5754" + ], + [ + "gene_synonym", + "NP_418652.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37772" + ], + [ + "gene_synonym", + "b4231" + ], + [ + "gene_synonym", + "yjfF" + ] + ], + "dna_sequence": "GTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCTTTACTGCCTGACCCAGTTTCCCGGTTTTGCTTCCACAAGAGTGATCTGCAATATCCTGACCGATAATGCCTTTCTTGGGATCATTGCCGTTGGCATGACCTTTGTGATCCTCTCAGGTGGGATCGATCTCTCCGTCGGTTCGGTGATCGCCTTTACTGGCGTGTTTCTGGCAAAAGTGATTGGCGATTTCGGCCTCTCGCCGCTGCTGGCGTTTCCGCTAGTGCTGGTGATGGGCTGTGCCTTCGGCGCATTTATGGGGCTTCTGATCGACGCCCTGAAGATCCCGGCATTTATCATTACGCTTGCGGGGATGTTCTTTTTGCGCGGCGTCAGCTATCTCGTTTCGGAAGAGTCGATTCCGATAAACCATCCCATTTATGACACGCTCTCAAGCCTTGCGTGGAAAATCCCTGGCGGCGGTCGCTTAAGTGCGATGGGACTGCTGATGTTGGCGGTGGTGGTTATCGGCATATTCCTCGCGCATCGTACCCGTTTTGGTAATCAGGTATACGCCATTGGCGGCAACGCAACGTCGGCGAATCTGATGGGGATTTCCACTCGCAGCACCACTATTCGCATTTATATGCTCTCCACCGGACTGGCAACGCTGGCGGGGATTGTCTTCTCGATTTATACCCAGGCCGGATATGCGCTGGCGGGCGTAGGTGTGGAACTGGATGCTATCGCCTCAGTGGTAATTGGCGGTACGCTTTTGAGCGGTGGCGTTGGAACGGTATTAGGGACGCTTTTTGGCGTGGCGATTCAGGGACTGATTCAGACTTACATAAACTTTGATGGCACGCTGAGTTCCTGGTGGACGAAAATCGCCATCGGTATTTTGTTGTTTATTTTTATAGCATTACAGCGTGGATTAACGGTGCTGTGGGAGAATCGTCAGAGTTCGCCAGTGACAAGAGTCAACATTGCGCAGCAATAA", + "dna_sequence_length": 996, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_4148", + "location": [ + [ + "NC_000913", + 4453583, + "+", + 996 + ] + ], + "md5": "13d5a247d04c66c73c02529cc11b2382", + "parent_gene": "", + "protein_md5": "caa210325f5b3c869097691e91636117", + "protein_translation": "MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQQ", + "protein_translation_length": 331, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013842" + ], + [ + "gene_synonym", + "ECK4227" + ], + [ + "gene_synonym", + "EcoGene:EG10283" + ], + [ + "gene_synonym", + "GI:16132054" + ], + [ + "gene_synonym", + "GeneID:948753" + ], + [ + "gene_synonym", + "JW4191" + ], + [ + "gene_synonym", + "NP_418653.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A993" + ], + [ + "gene_synonym", + "b4232" + ], + [ + "gene_synonym", + "fbp" + ], + [ + "gene_synonym", + "fdp" + ] + ], + "dna_sequence": "ATGAAAACGTTAGGTGAATTTATTGTCGAAAAGCAGCACGAGTTTTCTCATGCTACCGGTGAGCTCACTGCTTTGCTGTCGGCAATAAAACTGGGCGCCAAGATTATCCATCGCGATATCAACAAAGCAGGACTGGTTGATATCCTGGGTGCCAGCGGTGCTGAGAACGTGCAGGGCGAGGTTCAGCAGAAACTCGACTTGTTCGCTAATGAAAAACTGAAAGCCGCACTGAAAGCACGCGATATCGTTGCGGGCATTGCCTCTGAAGAAGAAGATGAGATTGTCGTCTTTGAAGGCTGTGAACACGCAAAATACGTGGTGCTGATGGACCCCCTGGATGGCTCGTCCAACATCGATGTTAACGTCTCTGTCGGTACCATTTTCTCCATCTACCGCCGCGTTACGCCTGTTGGCACGCCGGTAACGGAAGAAGATTTCCTCCAGCCTGGTAACAAACAGGTTGCGGCAGGTTACGTGGTATACGGCTCCTCTACCATGCTGGTTTACACCACCGGATGCGGTGTTCACGCCTTTACTTACGATCCTTCGCTCGGCGTTTTCTGCCTGTGCCAGGAACGGATGCGCTTCCCGGAGAAAGGCAAAACCTACTCCATCAACGAAGGAAACTACATTAAGTTTCCGAACGGGGTGAAGAAGTACATTAAATTCTGCCAGGAAGAAGATAAATCCACCAACCGCCCTTATACCTCACGTTATATCGGTTCACTGGTCGCGGATTTCCACCGTAACCTGCTGAAAGGCGGTATTTATCTCTACCCAAGCACCGCCAGCCACCCGGACGGCAAACTGCGTTTGCTGTATGAGTGCAACCCGATGGCATTCCTGGCGGAACAAGCGGGCGGTAAAGCGAGCGATGGCAAAGAGCGTATTCTGGATATCATCCCGGAAACCCTGCACCAGCGCCGTTCATTCTTTGTCGGCAACGACCATATGGTTGAAGATGTCGAACGCTTTATCCGTGAGTTCCCGGACGCGTAA", + "dna_sequence_length": 999, + "functions": [ + "fructose-1,6-bisphosphatase I" + ], + "id": "CDS_4149", + "location": [ + [ + "NC_000913", + 4455609, + "-", + 999 + ] + ], + "md5": "f6959cc7fd2fd141af29d9953aef69b4", + "parent_gene": "", + "protein_md5": "6dce545efd3bad72b609138fd3a8b0fe", + "protein_translation": "MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013847" + ], + [ + "gene_synonym", + "ECK4228" + ], + [ + "gene_synonym", + "EcoGene:EG12440" + ], + [ + "gene_synonym", + "GI:16132055" + ], + [ + "gene_synonym", + "GeneID:948752" + ], + [ + "gene_synonym", + "JW4192" + ], + [ + "gene_synonym", + "NP_418654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37773" + ], + [ + "gene_synonym", + "b4233" + ], + [ + "gene_synonym", + "mpl" + ], + [ + "gene_synonym", + "tpl" + ], + [ + "gene_synonym", + "yjfG" + ] + ], + "dna_sequence": "ATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGGCGGTCTGGCGATGCTGGCGCGCCAGTTAGGCCATGAAGTAACGGGTTCGGACGCCAATGTGTATCCGCCGATGAGCACCTTACTTGAGAAGCAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATTGGCAACGCCATGACCCGTGGAAATCCGTGTGTGGAAGCGGTACTGGAAAAAAATATCCCTTATATGTCAGGTCCACAGTGGCTGCACGATTTTGTGCTGCGCGACCGCTGGGTGCTGGCCGTTGCCGGTACACACGGCAAAACCACCACCGCGGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCGACAAACGCTCTAAATTTGTTCATTACTGCCCGCGTACGCTGATCCTCAACAACCTTGAGTTCGATCACGCCGATATCTTTGACGACCTGAAAGCGATCCAGAAACAGTTCCACCATCTGGTGCGTATCGTTCCGGGGCAGGGCCGTATTATCTGGCCGGAAAATGACATCAACCTGAAACAGACCATGGCGATGGGCTGCTGGAGCGAGCAGGAGCTGGTGGGTGAGCAGGGTCACTGGCAGGCGAAAAAGCTGACCACCGATGCTTCCGAATGGGAAGTTTTGCTGGATGGCGAAAAAGTGGGCGAAGTGAAATGGTCGCTGGTAGGCGAACATAATATGCACAATGGCCTGATGGCGATTGCAGCGGCTCGCCATGTTGGTGTAGCGCCGGCAGATGCCGCTAACGCGCTGGGTTCGTTTATTAATGCTCGTCGCCGTCTGGAGTTGCGTGGTGAAGCGAATGGCGTCACGGTATATGACGATTTTGCCCATCACCCGACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAA", + "dna_sequence_length": 1374, + "functions": [ + "UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase" + ], + "id": "CDS_4150", + "location": [ + [ + "NC_000913", + 4455785, + "+", + 1374 + ] + ], + "md5": "e2bc19b796efe6bbffa97b3f83857159", + "parent_gene": "", + "protein_md5": "781f6f3c513a8c14b2db759e5f9ff879", + "protein_translation": "MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLEPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSAHLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEAAQ", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013850" + ], + [ + "gene_synonym", + "ECK4229" + ], + [ + "gene_synonym", + "EcoGene:EG11410" + ], + [ + "gene_synonym", + "GI:16132056" + ], + [ + "gene_synonym", + "GeneID:948751" + ], + [ + "gene_synonym", + "JW4193" + ], + [ + "gene_synonym", + "NP_418655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8X0" + ], + [ + "gene_synonym", + "b4234" + ], + [ + "gene_synonym", + "yjgA" + ] + ], + "dna_sequence": "ATGACTAAGCAGCCCGAAGACTGGCTCGACGACGTTCCCGGTGATGACATCGAAGACGAAGACGATGAAATTATCTGGGTCAGTAAAAGTGAAATTAAACGTGATGCCGAGGAGCTAAAACGCCTTGGCGCGGAAATTGTTGATCTGGGGAAAAACGCGCTGGATAAGATCCCGTTAGATGCGGATCTGCGCGCGGCTATTGAGCTCGCCCAGCGTATTAAGATGGAAGGTCGCCGCCGCCAGTTGCAGCTCATCGGTAAGATGCTGCGCCAGCGCGACGTAGAGCCTATTCGTCAGGCGCTGGATAAGCTGAAAAACCGTCACAACCAGCAGGTGGTGCTGTTCCATAAACTGGAAAACCTGCGCGATCGTCTGATCGATCAAGGTGATGACGCCATCGCTGAGGTATTAAATCTGTGGCCCGATGCCGATCGTCAGCAACTGCGTACTCTGATCCGCAACGCGAAGAAAGAGAAAGAAGGGAATAAGCCGCCGAAATCCGCACGCCAGATTTTCCAGTATCTGCGCGAGTTAGCGGAGAACGAAGGGTAA", + "dna_sequence_length": 552, + "functions": [ + "ribosome-associated UPF0307 family protein" + ], + "id": "CDS_4151", + "location": [ + [ + "NC_000913", + 4457865, + "-", + 552 + ] + ], + "md5": "e1f9c6ee32ac4e4f2fe655f39d3a9b7c", + "parent_gene": "", + "protein_md5": "9718f16e2e82da45c9a8064a1edf0d72", + "protein_translation": "MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAENEG", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013854" + ], + [ + "gene_synonym", + "ECK4230" + ], + [ + "gene_synonym", + "EcoGene:EG10741" + ], + [ + "gene_synonym", + "GI:16132057" + ], + [ + "gene_synonym", + "GeneID:948750" + ], + [ + "gene_synonym", + "JW4194" + ], + [ + "gene_synonym", + "NP_418656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK0" + ], + [ + "gene_synonym", + "b4235" + ], + [ + "gene_synonym", + "mcb" + ], + [ + "gene_synonym", + "pmbA" + ], + [ + "gene_synonym", + "tldE" + ] + ], + "dna_sequence": "ATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTGGAAGAAGCAGTTTCCACTGCGCTGGAGTTGGCCTCAGGCAAATCGGACGGTGCGGAAGTTGCCGTCAGCAAGACCACCGGCATTAGCGTAAGCACGCGTTATGGTGAAGTGGAGAATGTTGAATTCAATAGCGATGGCGCGCTGGGGATCACTGTTTATCACCAGAACCGCAAAGGTAGCGCATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGTTATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTTCCCCGGATGAAGCCATTGAACTGGCGGCCCGCGCAGAACAGGCGGCATTGCAGGCGGACAAACGCATCACCAATACCGAAGGTGGCAGCTTTAACAGCCACTACGGTGTCAAAGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTCACCGCGTAAACTCTCCACCATGAAAGCGCCAGTCATTTTTGCCAATGAAGTGGCAACCGGGCTTTTTGGGCATCTGGTGGGGGCGATAGCGGGTGGATCGGTTTATCGTAAATCTACCTTCCTGCTGGATTCGCTGGGTAAACAAATTCTGCCGGACTGGCTGACCATTGAAGAGCATCCGCATCTGCTGAAAGGGCTGGCGTCGACGCCATTCGACAGCGAAGGTGTGCGCACCGAGCGTCGCGATATTATTAAAGATGGCATCCTGACTCAGTGGCTGCTGACCAGCTACTCGGCGCGGAAACTGGGGCTGAAAAGCACCGGACATGCGGGCGGTATTCACAACTGGCGGATTGCCGGACAAGGTCTAAGCTTCGAGCAGATGCTCAAAGAGATGGGCACCGGGCTGGTGGTGACGGAATTGATGGGCCAGGGCGTGAGTGCCATTACCGGTGATTATTCCCGTGGTGCAGCGGGCTTCTGGGTAGAGAATGGCGAAATTCAGTATCCGGTGAGCGAAATCACCATCGCAGGTAATTTAAAAGATATGTGGCGCAATATTGTCACCGTCGGTAACGATATTGAAACACGCAGTAATATACAGTGTGGTTCTGTGCTGTTGCCGGAGATGAAAATCGCCGGACAGTAA", + "dna_sequence_length": 1353, + "functions": [ + "putative antibiotic peptide MccB17 maturation peptidase" + ], + "id": "CDS_4152", + "location": [ + [ + "NC_000913", + 4457959, + "+", + 1353 + ] + ], + "md5": "09fb961e57a9bd29546acf6aa0ae318c", + "parent_gene": "", + "protein_md5": "d29caf3d891e07fc006be50965ca02db", + "protein_translation": "MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013858" + ], + [ + "gene_synonym", + "ECK4231" + ], + [ + "gene_synonym", + "EcoGene:EG50008" + ], + [ + "gene_synonym", + "GeneID:948758" + ], + [ + "gene_synonym", + "JW4195" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABE7" + ], + [ + "gene_synonym", + "b4236" + ], + [ + "gene_synonym", + "cybC" + ] + ], + "dna_sequence": "ATTCTTGCAGTCTCCTCGTTGGTATTCAGTTCGGCGTCATTTGCTGCTGATCTCGAAGACAATATGGAAACCCTCAACGACAATTTAAAAGTGGTCGAAAAAGCCGATAACGCGGCGCAAGTCAAAGACGCGTTAACGAAGATGCGCGCCGCAGCGCTGGATGCGCAAAAAGCAACGCCGCCGAAGCTCGAAGATAAATCACCGGACAGCCCGGAAATGAAAGATTTCCGCCACGGTTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAA", + "dna_sequence_length": 366, + "id": "CDS_4153", + "location": [ + [ + "NC_000913", + 4459490, + "+", + 366 + ] + ], + "md5": "9256a449cbac338ecc7401d03d7697d7", + "parent_gene": "", + "protein_md5": "a00cd79ee0d295ab2d760b6670fea22a", + "protein_translation": "ILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNSYHKKYR", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013860" + ], + [ + "gene_synonym", + "ECK4232" + ], + [ + "gene_synonym", + "EcoGene:EG12523" + ], + [ + "gene_synonym", + "GI:16132059" + ], + [ + "gene_synonym", + "GeneID:948757" + ], + [ + "gene_synonym", + "JW4196" + ], + [ + "gene_synonym", + "NP_418658.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N8" + ], + [ + "gene_synonym", + "b4237" + ], + [ + "gene_synonym", + "nrdG" + ], + [ + "gene_synonym", + "yjgE" + ] + ], + "dna_sequence": "ATGAATTATCATCAGTACTATCCTGTCGACATCGTCAACGGCCCCGGCACTCGTTGCACCCTGTTTGTCTCCGGGTGTGTTCATGAATGCCCCGGTTGCTATAACAAAAGCACATGGCGGGTAAATTCCGGTCAGCCATTTACCAAAGCAATGGAAGACCAGATCATTAACGATCTGAATGACACTCGTATCAAACGCCAGGGTATTTCCCTCTCCGGCGGCGATCCGCTGCATCCGCAAAACGTGCCGGATATTCTGAAACTGGTACAACGCATCCGCGCCGAGTGTCCGGGTAAAGACATCTGGGTGTGGACAGGCTATAAACTCGACGAACTCAACGCTGCGCAAATGCAGGTTGTTGATTTGATTAACGTGCTGGTCGACGGCAAATTTGTGCAGGATTTAAAAGACCCTTCCCTGATCTGGCGCGGCAGCAGCAATCAGGTGGTGCATCATTTGCGATGA", + "dna_sequence_length": 465, + "functions": [ + "anaerobic ribonucleotide reductase activating protein" + ], + "id": "CDS_4154", + "location": [ + [ + "NC_000913", + 4460364, + "-", + 465 + ] + ], + "md5": "6f3fb4ee8686a9bcf76c6d2a8af48455", + "parent_gene": "", + "protein_md5": "f0d1233ca95f743a927fe329d7424072", + "protein_translation": "MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013865" + ], + [ + "gene_synonym", + "ECK4233" + ], + [ + "gene_synonym", + "EcoGene:EG11417" + ], + [ + "gene_synonym", + "GI:16132060" + ], + [ + "gene_synonym", + "GeneID:948755" + ], + [ + "gene_synonym", + "JW4197" + ], + [ + "gene_synonym", + "NP_418659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28903" + ], + [ + "gene_synonym", + "b4238" + ], + [ + "gene_synonym", + "nrdD" + ] + ], + "dna_sequence": "ATGACACCGCATGTGATGAAACGAGACGGCTGCAAAGTGCCGTTTAAATCAGAGCGCATCAAAGAAGCGATTCTGCGTGCAGCTAAAGCAGCGGAAGTCGATGATGCCGATTATTGCGCCACTGTTGCCGCGGTTGTCAGCGAGCAGATGCAGGGCCGCAACCAGGTGGATATCAATGAGATCCAGACCGCAGTTGAAAATCAGCTGATGTCAGGTCCATACAAACAACTGGCTCGTGCTTACATCGAGTACCGTCACGATCGCGACATTGAACGTGAAAAACGCGGTCGCCTGAACCAGGAGATCCGTGGTCTGGTCGAGCAGACCAACGCCTCGTTACTCAACGAAAACGCCAACAAAGACAGCAAGGTGATTCCAACCCAGCGCGACCTGCTGGCCGGGATCGTGGCTAAACACTATGCACGTCAGCACCTGCTGCCGCGTGACGTGGTGCAGGCACATGAGCGTGGCGATATTCACTATCACGATCTCGATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTTAAAATGGGGAACGCCGAGATTGAACCGCCGAAGTCGATCTCTACGGCAACCGCGGTAACTGCGCAGATTATTGCTCAGGTTGCCAGCCATATTTATGGCGGCACCACCATTAACCGTATCGATGAAGTGCTGGCACCGTTTGTCACTGCCAGCTACAACAAACATCGCAAGACCGCAGAAGAGTGGAACATCCCGGACGCCGAAGGCTACGCTAACTCTCGAACCATCAAAGAGTGCTACGATGCCTTCCAGTCACTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGACGCCGTTTGTAACCTTTGGTTTTGGCCTGGGCACCAGCTGGGAATCGCGCCTGATTCAGGAATCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCCGAAACTGGTGTTTGCGATTCGCGATGGCCTGAACCATAAAAAAGGCGATCCGAACTACGACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTGAACTACGATCAGGTAGTGAAAGTCACCGGTTCGTTTAAAACTCCGATGGGCTGCCGCAGCTTCCTCGGCGTGTGGGAAAATGAAAACGGCGAGCAGATCCACGATGGTCGTAACAACCTCGGCGTGATCAGCCTGAACCTGCCGCGTATTGCTCTGGAAGCAAAAGGCGATGAAGCCACCTTCTGGAAGCTGCTGGATGAACGTCTGGTGCTGGCACGTAAGGCGCTGATGACCCGTATCGCTCGTCTCGAAGGCGTGAAAGCGCGCGTGGCCCCGATCCTCTATATGGAAGGTGCTTGTGGCGTGCGTCTCAATGCTGACGATGATGTTTCTGAAATCTTCAAAAACGGTCGTGCGTCTATTTCGCTGGGTTACATCGGCATCCACGAAACCATTAACGCGCTGTTCGGCGGCGAGCATGTTTACGACAACGAGCAGCTTCGCGCGAAAGGTATCGCCATTGTTGAACGTCTGCGTCAGGCAGTGGATCAGTGGAAAGAAGAAACGGGTTATGGTTTCAGTCTCTACAGCACGCCGAGTGAAAACCTGTGCGATCGCTTCTGCCGTCTCGATACTGCTGAGTTTGGCGTGGTGCCGGGCGTGACCGATAAAGGTTACTACACCAACAGTTTCCACCTCGATGTGGAGAAGAAGGTGAACCCGTACGACAAGATCGACTTTGAAGCGCCTTACCCGCCGCTGGCGAACGGTGGTTTCATTTGCTACGGCGAGTATCCAAACATTCAGCACAACCTGAAGGCGCTGGAAGATGTCTGGGATTACAGCTATCAGCATGTACCGTATTACGGCACCAATACACCGATTGATGAGTGCTACGAGTGTGGCTTTACCGGTGAGTTCGAGTGCACCAGCAAAGGCTTCACTTGCCCGAAATGTGGTAACCATGACGCCTCCCGTGTGTCGGTAACTCGCCGCGTGTGCGGATATTTAGGTAGCCCGGATGCACGTCCGTTTAACGCTGGTAAGCAGGAAGAAGTTAAGCGCCGCGTTAAACATTTGGGGAATGGGCAGATAGGTTAA", + "dna_sequence_length": 2139, + "functions": [ + "anaerobic ribonucleoside-triphosphate reductase" + ], + "id": "CDS_4155", + "location": [ + [ + "NC_000913", + 4462660, + "-", + 2139 + ] + ], + "md5": "23f00962bb99b6547d568bdaff954de5", + "parent_gene": "", + "protein_md5": "1e679e31a4025e71e592af82d9aec514", + "protein_translation": "MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG", + "protein_translation_length": 712, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013870" + ], + [ + "gene_synonym", + "ECK4234" + ], + [ + "gene_synonym", + "EcoGene:EG11402" + ], + [ + "gene_synonym", + "GI:16132061" + ], + [ + "gene_synonym", + "GeneID:948762" + ], + [ + "gene_synonym", + "JW4198" + ], + [ + "gene_synonym", + "NP_418660.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28904" + ], + [ + "gene_synonym", + "b4239" + ], + [ + "gene_synonym", + "olgH" + ], + [ + "gene_synonym", + "treC" + ], + [ + "gene_synonym", + "treE" + ] + ], + "dna_sequence": "ATGACTCATCTTCCCCACTGGTGGCAAAACGGCGTTATCTACCAGATTTATCCAAAGAGTTTTCAGGACACCACGGGTAGCGGTACCGGCGATTTACGTGGCGTTATCCAACACCTGGACTATCTGCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGACGTAGCGAACTATACGGCGATTGATCCCACCTACGGCACGCTGGACGATTTTGACGAACTGGTGACGCAGGCAAAATCGCGCGGGATTCGTATCATTCTCGATATGGTGTTTAACCATACCTCTACCCAACATGCCTGGTTTCGCGAGGCGCTGAACAAAGAAAGCCCTTACCGCCAGTTTTATATCTGGCGCGATGGAGAACCAGAAACGCCACCGAACAACTGGCGTTCAAAATTTGGCGGTAGTGCGTGGCGCTGGCATGCGGAAAGCGAACAGTACTATTTGCATCTCTTTGCACCAGAACAGGCGGATCTCAACTGGGAGAATCCAGCGGTACGCGCAGAGCTGAAAAAAGTCTGTGAGTTCTGGGCCGATCGTGGGGTCGACGGGTTGCGCCTGGATGTGGTGAATCTGATCTCCAAAGACCCGCGTTTCCCTGAAGACCTGGACGGCGACGGGCGTCGCTTCTACACCGACGGGCCACGAGCACACGAGTTTTTGCACGAGATGAACCGCGATGTGTTTACGCCACGCGGGTTAATGACCGTAGGTGAAATGTCCTCCACCAGCCTTGAGCATTGCCAGCGATACGCGGCTCTGACAGGCAGTGAATTGTCGATGACCTTTAATTTTCATCACCTGAAGGTCGATTATCCCGGTGGTGAAAAATGGACGCTGGCTAAACCTGACTTTGTGGCGTTGAAAACATTGTTCCGCCACTGGCAACAAGGAATGCACAACGTAGCATGGAATGCCTTGTTCTGGTGTAACCACGATCAGCCGCGCATTGTTTCTCGCTTTGGTGATGAAGGTGAATACCGCGTGCCTGCGGCAAAAATGCTGGCGATGGTGCTGCATGGCATGCAGGGAACGCCGTATATCTACCAGGGCGAAGAGATTGGCATGACCAACCCGCATTTCACGCGCATTACTGACTATCGCGACGTAGAGAGCCTCAATATGTTTGCCGAGCTGCGCAACGATGGGCGTGATGCCGACGAGTTATTGGCAATCCTCGCCAGTAAATCCCGTGACAACAGTCGCACGCCCATGCAATGGAGCAACGGCGATAATGCCGGGTTTACGGCTGGCGAACCGTGGATTGGCCTGGGCGATAACTATCAACAAATCAACGTAGAAGCCGCGCTGGCCGATGATTCCTCGGTGTTTTACACCTACCAAAAGTTAATCGCACTGCGTAAGCAGGAAGCCATCCTGACATGGGGCAATTACCAGGATCTGCTGCCAAACAGCCCTGTATTGTGGTGCTATCGCCGTGAATGGAAGGGGCAAACCTTGCTGGTCATTGCCAACCTTAGCCGTGAGATCCAACCCTGGCAGGCAGGGCAAATGCGCGGCAACTGGCAGCTTGTGATGCATAACTACGAAGAAGCCTCACCACAACCCTGTGCCATGAATTTACGGCCTTTTGAGGCTGTCTGGTGGTTACAGAAGTAA", + "dna_sequence_length": 1656, + "functions": [ + "trehalose-6-P hydrolase" + ], + "id": "CDS_4156", + "location": [ + [ + "NC_000913", + 4464709, + "-", + 1656 + ] + ], + "md5": "19297d58f86e2ae503b4e21a5600cdef", + "parent_gene": "", + "protein_md5": "4ddead4311e0d6cac4e194807ecd63fd", + "protein_translation": "MTHLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQHLDYLHKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALADDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSREIQPWQAGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013872" + ], + [ + "gene_synonym", + "ECK4235" + ], + [ + "gene_synonym", + "EcoGene:EG12127" + ], + [ + "gene_synonym", + "GI:16132062" + ], + [ + "gene_synonym", + "GeneID:948761" + ], + [ + "gene_synonym", + "JW4199" + ], + [ + "gene_synonym", + "NP_418661.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36672" + ], + [ + "gene_synonym", + "b4240" + ], + [ + "gene_synonym", + "treB" + ] + ], + "dna_sequence": "ATGATGAGCAAAATAAACCAAACGGATATCGATCGGTTGATTGAACTGGTCGGCGGGCGCGGCAATATTGCGACGGTGAGCCACTGTATTACTCGCCTACGCTTTGTCCTCAACCAACCGGCCAATGCCAGACCGAAAGAAATTGAGCAACTCCCTATGGTGAAAGGCTGTTTCACCAATGCCGGGCAATTTCAGGTGGTGATTGGCACCAACGTGGGTGATTACTATCAAGCACTGATTGCGTCAACCGGACAGGCGCAGGTTGATAAAGAGCAGGTAAAAAAAGCCGCCCGGCATAATATGAAATGGCATGAGCAGTTGATCTCTCATTTCGCGGTGATCTTCTTCCCGTTGCTGCCCGCGTTGATTAGCGGCGGTTTGATCCTCGGTTTTCGCAATGTGATCGGCGATTTGCCCATGAGCAACGGTCAGACGCTGGCGCAAATGTACCCTTCCCTGCAAACGATCTACGATTTTCTGTGGTTGATCGGTGAAGCGATCTTCTTCTACCTGCCGGTCGGTATTTGCTGGTCAGCGGTGAAAAAAATGGGCGGCACGCCGATCCTTGGTATCGTGCTTGGCGTGACACTGGTTTCTCCACAGCTGATGAACGCTTATCTGCTCGGGCAGCAGCTGCCGGAAGTGTGGGACTTTGGCATGTTCAGCATCGCCAAAGTAGGCTATCAGGCGCAGGTGATCCCGGCACTGTTAGCCGGACTGGCGCTGGGCGTTATTGAAACTCGCCTTAAACGCATCGTGCCGGATTACCTCTATCTGGTGGTGGTACCCGTCTGTTCGCTGATCCTCGCGGTGTTCCTCGCCCATGCGCTGATTGGTCCGTTTGGTCGCATGATTGGCGATGGCGTTGCCTTTGCGGTACGTCACCTGATGACCGGCAGCTTTGCTCCGATTGGCGCAGCATTGTTTGGCTTCCTGTACGCCCCGCTGGTGATCACCGGTGTACACCAGACCACGCTTGCTATTGATTTGCAGATGATTCAAAGCATGGGTGGTACGCCAGTGTGGCCGCTGATTGCGCTGTCGAATATCGCTCAGGGCTCCGCCGTGATAGGCATTATCATTTCCAGCCGCAAGCACAATGAACGCGAGATCTCCGTGCCTGCCGCTATCTCCGCCTGGCTTGGGGTCACTGAGCCTGCAATGTACGGCATCAACCTGAAATATCGCTTCCCGATGCTGTGCGCGATGATTGGTTCTGGTCTGGCAGGATTGCTATGCGGCCTGAACGGCGTTATGGCGAATGGCATCGGCGTAGGCGGCCTGCCGGGAATTCTCTCGATTCAACCGAGCTACTGGCAGGTGTTTGCGCTGGCAATGGCTATCGCCATCATCATCCCGATTGTACTCACCTCGTTTATCTATCAGCGGAAATACCGCCTGGGCACGCTGGACATTGTTTAA", + "dna_sequence_length": 1422, + "functions": [ + "trehalose-specific PTS enzyme: IIB and IIC component" + ], + "id": "CDS_4157", + "location": [ + [ + "NC_000913", + 4466180, + "-", + 1422 + ] + ], + "md5": "04ae6afef11a571de67d0255dbc7cab6", + "parent_gene": "", + "protein_md5": "7fa2c192d6828e914c6ad63eac343409", + "protein_translation": "MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV", + "protein_translation_length": 473, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013875" + ], + [ + "gene_synonym", + "ECK4236" + ], + [ + "gene_synonym", + "EcoGene:EG12202" + ], + [ + "gene_synonym", + "GI:16132063" + ], + [ + "gene_synonym", + "GeneID:948760" + ], + [ + "gene_synonym", + "JW4200" + ], + [ + "gene_synonym", + "NP_418662.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36673" + ], + [ + "gene_synonym", + "b4241" + ], + [ + "gene_synonym", + "treR" + ] + ], + "dna_sequence": "ATGCAAAATCGGCTGACCATCAAAGATATCGCGCGCTTAAGCGGCGTGGGGAAATCTACAGTTTCCCGGGTGCTGAATAACGAAAGCGGCGTGAGCCAGCTCACCCGCGAGCGTGTTGAAGCAGTGATGAATCAGCATGGATTTTCCCCTTCCCGCTCTGCGCGCGCTATGCGTGGGCAAAGCGATAAAGTGGTCGCCATCATTGTTACCCGTCTGGATTCGTTGTCAGAAAATCTCGCCGTTCAAACCATGCTGCCAGCGTTCTATGAACAAGGTTACGACCCAATCATGATGGAAAGTCAGTTTTCCCCGCAATTAGTTGCCGAACATTTGGGAGTGCTGAAACGGCGTAATATCGACGGCGTAGTGCTGTTCGGTTTTACTGGCATAACAGAAGAAATGTTAGCCCACTGGCAGTCATCGCTGGTTCTGCTGGCGCGTGACGCAAAAGGCTTTGCTTCGGTCTGTTATGACGACGAAGGGGCAATCAAAATCCTGATGCAACGGCTGTATGACCAGGGGCATCGTAATATCAGTTATCTCGGCGTGCCGCACAGTGACGTGACAACCGGTAAGCGACGTCACGAAGCCTACCTGGCGTTCTGCAAAGCGCATAAACTGCATCCCGTTGCCGCCCTGCCAGGGCTTGCTATGAAGCAAGGCTATGAGAACGTTGCAAAAGTGATTACGCCTGAAACTACCGCCTTACTGTGCGCAACCGACACGCTGGCACTTGGCGCAAGTAAATACCTGCAAGAGCAACGCATCGACACCTTGCAACTGGCGAGCGTCGGTAATACGCCGTTAATGAAATTCCTCCATCCGGAGATCGTAACCGTAGATCCCGGTTACGCCGAAGCTGGACGCCAGGCGGCTTGCCAGTTGATCGCGCAGGTAACCGGGCGCAGCGAACCGCAACAAATCATCATCCCCGCCACCCTGTCCTGA", + "dna_sequence_length": 948, + "functions": [ + "trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor" + ], + "id": "CDS_4158", + "location": [ + [ + "NC_000913", + 4467246, + "-", + 948 + ] + ], + "md5": "966375c6e667f57330e056120b2da398", + "parent_gene": "", + "protein_md5": "4bc4e2950a34015dc197c68f8d50b94b", + "protein_translation": "MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4513" + ], + [ + "gene_synonym", + "EcoGene:EG14498" + ], + [ + "gene_synonym", + "GI:308209623" + ], + [ + "gene_synonym", + "GeneID:9797237" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:E2JKY7" + ], + [ + "gene_synonym", + "YP_003933616.1" + ], + [ + "gene_synonym", + "b4702" + ], + [ + "gene_synonym", + "mgtL" + ] + ], + "dna_sequence": "ATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAA", + "dna_sequence_length": 54, + "functions": [ + "regulatory leader peptide for mgtA" + ], + "id": "CDS_4159", + "location": [ + [ + "NC_000913", + 4467431, + "+", + 54 + ] + ], + "md5": "b094b53e5ad78157cdbaf1c6b8947e61", + "parent_gene": "", + "protein_md5": "f11f0a0cd138fc93b923468f234e4779", + "protein_translation": "MEPDPTPLPRRRLKLFR", + "protein_translation_length": 17, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013883" + ], + [ + "gene_synonym", + "ECK4237" + ], + [ + "gene_synonym", + "EcoGene:EG12525" + ], + [ + "gene_synonym", + "GI:16132064" + ], + [ + "gene_synonym", + "GeneID:948778" + ], + [ + "gene_synonym", + "JW4201" + ], + [ + "gene_synonym", + "NP_418663.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABB8" + ], + [ + "gene_synonym", + "b4242" + ], + [ + "gene_synonym", + "corB" + ], + [ + "gene_synonym", + "mgt" + ], + [ + "gene_synonym", + "mgtA" + ] + ], + "dna_sequence": "ATGTTTAAAGAAATTTTTACCCGGCTCATTCGCCATTTACCTTCCCGTCTGGTTCATCGTGATCCATTGCCTGGCGCGCAGCAGACAGTGAATACGGTGGTCCCGCCGTCCTTAAGTGCGCATTGCCTGAAAATGGCGGTGATGCCCGAAGAAGAATTGTGGAAAACGTTCGACACCCATCCGGAAGGGTTAAATCAGGCGGAAGTGGAATCTGCCCGCGAACAACATGGTGAAAATAAATTACCCGCACAACAACCGTCGCCGTGGTGGGTACATTTATGGGTCTGCTATCGCAACCCCTTTAATATTTTACTCACCATTCTCGGCGCTATTTCTTACGCCACGGAAGATTTATTTGCTGCGGGCGTTATCGCGCTAATGGTCGCTATTTCTACGTTGCTGAACTTTATTCAGGAAGCACGTTCCACTAAAGCGGCAGATGCCCTGAAAGCGATGGTCAGCAATACTGCGACGGTGCTGCGCGTAATTAACGACAAAGGCGAAAATGGCTGGCTGGAGATCCCGATCGACCAGCTGGTGCCCGGCGATATTATAAAACTGGCGGCGGGAGATATGATCCCGGCAGATTTACGTATCTTGCAGGCGCGGGATCTGTTCGTCGCTCAGGCGTCGTTAACCGGTGAGTCTCTGCCCGTAGAAAAAGCCGCTACCACTCGCCAGCCGGAGCACAGCAATCCGCTGGAGTGCGACACGCTGTGTTTTATGGGCACCACCGTGGTGAGCGGCACGGCACAAGCAATGGTGATTGCTACAGGTGCCAATACCTGGTTTGGTCAACTGGCGGGGCGTGTTAGTGAGCAGGAAAGCGAGCCGAATGCCTTTCAGCAAGGGATCAGCCGCGTCAGTATGCTGCTGATTCGCTTTATGCTGGTGATGGCACCGGTGGTGCTGTTAATCAATGGTTACACCAAAGGCGACTGGTGGGAAGCGGCGCTGTTTGCGCTTTCGGTCGCGGTAGGCCTAACGCCGGAAATGTTGCCGATGATTGTTACCTCGACGCTGGCGCGCGGCGCAGTAAAGCTGTCGAAACAGAAAGTGATCGTCAAACATCTGGATGCTATTCAGAACTTTGGCGCAATGGATATTCTGTGCACTGATAAAACCGGCACCCTGACGCAGGATAAAATTGTGCTGGAGAATCATACCGATATCTCCGGTAAAACCAGCGAACGCGTGCTGCATAGCGCGTGGTTGAACAGTCATTATCAGACCGGACTTAAAAACCTGCTCGATACAGCGGTGCTCGAAGGTACGGATGAAGAGTCAGCGCGCTCGCTGGCCAGTCGTTGGCAAAAAATTGATGAGATTCCGTTTGATTTCGAGCGTCGCCGGATGTCGGTGGTAGTGGCAGAAAATACCGAGCACCATCAGCTGGTTTGCAAAGGTGCATTGCAGGAAATCCTCAATGTGTGTTCGCAGGTGCGTCACAATGGCGAGATTGTGCCGCTCGATGACATCATGCTGCGTAAGATTAAGCGGGTTACTGATACGCTGAATCGTCAGGGGCTGCGCGTGGTTGCGGTGGCGACGAAATACCTGCCAGCGCGTGAAGGAGATTACCAGCGGGCGGATGAATCCGACCTGATCCTCGAAGGATATATTGCTTTTCTTGATCCGCCAAAAGAGACAACCGCTCCGGCACTGAAGGCATTAAAAGCGAGTGGAATTACCGTAAAAATCCTTACTGGCGACAGTGAGTTAGTTGCAGCGAAAGTGTGCCATGAAGTGGGGCTGGACGCGGGAGAGGTGGTCATTGGTAGTGATATTGAAACGCTATCTGACGACGAACTGGCAAATCTTGCACAGCGTACCACGCTGTTTGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGACGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGCGAGCTCTAACTTCGGTAATGTGTTCAGCGTGCTGGTAGCGAGTGCTTTCTTGCCCTTCCTGCCGATGTTGCCGTTACACTTGCTTATTCAGAACCTGCTGTACGATGTGTCACAGGTGGCGATCCCGTTTGATAACGTCGACGACGAGCAAATTCAAAAGCCGCAGCGTTGGAATCCGGCGGATCTGGGGCGCTTTATGATCTTCTTCGGACCGATCAGCTCGATCTTCGATATTTTGACGTTTTGCCTGATGTGGTGGGTATTCCATGCCAACACGCCGGAAACGCAAACGCTGTTCCAGTCGGGATGGTTTGTGGTGGGCTTACTGTCGCAAACGCTGATTGTGCATATGATCCGCACCCGCCGTGTGCCGTTTATTCAGAGCTGTGCATCGTGGCCGTTAATGATCATGACCGTGATCGTGATGATTGTCGGGATCGCATTGCCGTTTTCACCGCTGGCCAGTTATCTGCAATTACAGGCGCTGCCGTTAAGCTATTTCCCGTGGCTGGTTGCGATTCTGGCAGGGTATATGACATTAACCCAGTTGGTGAAAGGGTTCTATAGCCGTCGTTACGGCTGGCAATAA", + "dna_sequence_length": 2697, + "functions": [ + "magnesium transporter" + ], + "id": "CDS_4160", + "location": [ + [ + "NC_000913", + 4467625, + "+", + 2697 + ] + ], + "md5": "e15bb297cc28f64d57accfe931c12d99", + "parent_gene": "", + "protein_md5": "8c3797ea0fc14e13bb4e9f69749c967e", + "protein_translation": "MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLKMAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ", + "protein_translation_length": 898, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013886" + ], + [ + "gene_synonym", + "ECK4238" + ], + [ + "gene_synonym", + "EcoGene:EG12524" + ], + [ + "gene_synonym", + "GI:90111711" + ], + [ + "gene_synonym", + "GeneID:948771" + ], + [ + "gene_synonym", + "JW5755" + ], + [ + "gene_synonym", + "NP_418664.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF93" + ], + [ + "gene_synonym", + "b4243" + ], + [ + "gene_synonym", + "ridA" + ], + [ + "gene_synonym", + "yjgF" + ] + ], + "dna_sequence": "ATGAGCAAAACTATCGCGACGGAAAATGCACCGGCAGCTATCGGTCCTTACGTACAGGGCGTTGATCTGGGCAATATGATCATCACCTCCGGTCAGATCCCGGTAAATCCGAAAACGGGCGAAGTACCGGCAGACGTCGCTGCACAGGCACGTCAGTCGCTGGATAACGTAAAAGCGATCGTCGAAGCCGCTGGCCTGAAAGTGGGCGACATCGTTAAAACTACCGTGTTTGTAAAAGATCTGAACGACTTCGCAACCGTAAACGCCACTTACGAAGCCTTCTTCACCGAACACAACGCCACCTTCCCGGCACGTTCTTGCGTTGAAGTTGCCCGTCTGCCGAAAGACGTGAAGATTGAGATCGAAGCGATCGCTGTTCGTCGCTAA", + "dna_sequence_length": 387, + "functions": [ + "enamine/imine deaminase, reaction intermediate detoxification" + ], + "id": "CDS_4161", + "location": [ + [ + "NC_000913", + 4470913, + "-", + 387 + ] + ], + "md5": "2469f58dbe1cdf8597f60c23a389a6ad", + "parent_gene": "", + "protein_md5": "d14ba95667ec939b3c82f5d87a3b9a28", + "protein_translation": "MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013889" + ], + [ + "gene_synonym", + "ECK4239" + ], + [ + "gene_synonym", + "EcoGene:EG10811" + ], + [ + "gene_synonym", + "GI:16132066" + ], + [ + "gene_synonym", + "GeneID:948763" + ], + [ + "gene_synonym", + "JW4203" + ], + [ + "gene_synonym", + "NP_418665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7F3" + ], + [ + "gene_synonym", + "b4244" + ], + [ + "gene_synonym", + "pyrI" + ] + ], + "dna_sequence": "ATGACACACGATAATAAATTGCAGGTTGAAGCTATTAAACGCGGCACGGTAATTGACCATATCCCCGCCCAGATCGGTTTTAAGCTGTTGAGTCTGTTCAAGCTGACCGAAACGGATCAGCGCATCACCATTGGTCTGAACCTGCCTTCTGGCGAGATGGGCCGCAAAGATCTGATCAAAATCGAAAATACCTTTTTGAGTGAAGATCAAGTAGATCAACTGGCATTGTATGCGCCGCAAGCCACGGTTAACCGTATCGACAACTATGAAGTGGTGGGTAAATCGCGCCCAAGTCTGCCGGAGCGCATCGACAATGTGCTGGTCTGCCCGAACAGCAACTGTATCAGCCATGCCGAACCGGTTTCATCCAGCTTTGCCGTGCGAAAACGCGCCAATGATATCGCGCTCAAATGCAAATACTGTGAAAAAGAGTTTTCCCATAATGTGGTGCTGGCCAATTAA", + "dna_sequence_length": 462, + "functions": [ + "aspartate carbamoyltransferase, regulatory subunit" + ], + "id": "CDS_4162", + "location": [ + [ + "NC_000913", + 4471447, + "-", + 462 + ] + ], + "md5": "92c6c473f7652f8c8fc2a81188ab9816", + "parent_gene": "", + "protein_md5": "3b4798139750e07d544a7cf29d8b335c", + "protein_translation": "MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013892" + ], + [ + "gene_synonym", + "ECK4240" + ], + [ + "gene_synonym", + "EcoGene:EG10805" + ], + [ + "gene_synonym", + "GI:16132067" + ], + [ + "gene_synonym", + "GeneID:948767" + ], + [ + "gene_synonym", + "JW4204" + ], + [ + "gene_synonym", + "NP_418666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A786" + ], + [ + "gene_synonym", + "b4245" + ], + [ + "gene_synonym", + "pyrB" + ] + ], + "dna_sequence": "ATGGCTAATCCGCTATATCAGAAACATATCATTTCCATAAACGACCTTAGTCGCGATGACCTTAATCTGGTGCTGGCGACAGCGGCGAAACTGAAAGCAAACCCGCAACCAGAGCTGTTGAAGCACAAAGTCATTGCCAGCTGTTTCTTCGAAGCCTCTACCCGTACCCGCCTCTCTTTCGAAACATCTATGCACCGCCTGGGGGCCAGCGTGGTGGGCTTCTCCGACAGCGCCAATACATCACTGGGTAAAAAGGGCGAAACGCTGGCCGATACCATTTCGGTTATCAGCACTTACGTCGATGCGATAGTGATGCGTCATCCGCAGGAAGGTGCGGCGCGCCTGGCCACCGAGTTTTCCGGCAATGTACCGGTACTGAATGCCGGTGATGGCTCCAACCAACATCCGACGCAAACCTTGCTGGACTTATTCACTATTCAGGAAACCCAGGGGCGTCTGGACAATCTCCACGTCGCAATGGTTGGTGACCTGAAATATGGCCGCACCGTTCACTCCCTGACTCAGGCGTTAGCGAAGTTCGACGGCAACCGTTTTTACTTCATCGCGCCGGACGCGCTGGCAATGCCGCAATACATTCTGGATATGCTCGATGAAAAAGGGATCGCATGGAGTCTGCACAGCTCTATTGAAGAAGTGATGGCGGAAGTAGACATCCTGTACATGACCCGCGTGCAAAAAGAGCGTCTGGACCCGTCCGAGTACGCCAACGTGAAAGCGCAGTTTGTTCTTCGCGCCAGCGATCTCCACAACGCCAAAGCCAATATGAAAGTGCTGCATCCGCTGCCGCGTGTTGATGAGATTGCGACGGATGTTGATAAAACGCCACACGCCTGGTACTTCCAGCAGGCAGGCAACGGGATTTTCGCTCGCCAGGCGTTACTGGCACTGGTTCTGAATCGCGATCTGGTACTGTAA", + "dna_sequence_length": 936, + "functions": [ + "aspartate carbamoyltransferase, catalytic subunit" + ], + "id": "CDS_4163", + "location": [ + [ + "NC_000913", + 4472395, + "-", + 936 + ] + ], + "md5": "a99a479d69f34bd87207bb749af56d63", + "parent_gene": "", + "protein_md5": "9d0c600b70c827b4f4c4c35dd66337e1", + "protein_translation": "MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013899" + ], + [ + "gene_synonym", + "ECK4241" + ], + [ + "gene_synonym", + "EcoGene:EG11279" + ], + [ + "gene_synonym", + "GI:16132068" + ], + [ + "gene_synonym", + "GeneID:948768" + ], + [ + "gene_synonym", + "JW4205" + ], + [ + "gene_synonym", + "NP_418667.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD83" + ], + [ + "gene_synonym", + "b4246" + ], + [ + "gene_synonym", + "pyrL" + ] + ], + "dna_sequence": "ATGGTTCAGTGTGTTCGACATTTTGTCTTACCGCGTCTGAAAAAAGACGCTGGCCTGCCGTTTTTCTTCCCGTTGATCACCCATTCCCAGCCCCTCAATCGAGGGGCTTTTTTTTGCCCAGGCGTCAGGAGATAA", + "dna_sequence_length": 135, + "functions": [ + "pyrBI operon leader peptide" + ], + "id": "CDS_4164", + "location": [ + [ + "NC_000913", + 4472533, + "-", + 135 + ] + ], + "md5": "8385be0f338914960890eb84f36f5ab2", + "parent_gene": "", + "protein_md5": "3691bc3a112b689e4110d399f97fdaaf", + "protein_translation": "MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR", + "protein_translation_length": 44, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013905" + ], + [ + "gene_synonym", + "ECK4242" + ], + [ + "gene_synonym", + "EcoGene:EG12527" + ], + [ + "gene_synonym", + "GI:16132070" + ], + [ + "gene_synonym", + "GeneID:948769" + ], + [ + "gene_synonym", + "JW4206" + ], + [ + "gene_synonym", + "NP_418669.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39332" + ], + [ + "gene_synonym", + "b4248" + ], + [ + "gene_synonym", + "yjgH" + ] + ], + "dna_sequence": "ATGGTAGAAAGAACCGCTGTTTTCCCTGCTGGCCGACATTCACTATATGCTGAGCATCGTTATTCTGCGGCTATTCGTTCCGGCGATTTGCTGTTTGTTTCCGGGCAAGTAGGAAGTCGAGAGGACGGAACACCAGAACCCGATTTTCAGCAACAAGTCAGACTGGCATTTGATAATTTGCATGCGACCCTGGCAGCTGCGGGATGCACTTTTGACGATATCATTGATGTTACGAGCTTCCATACCGATCCAGAAAACCAATTTGAAGACATCATGACGGTGAAAAATGAAATATTTAGCGCCCCACCTTATCCAAACTGGACGGCGGTGGGTGTTACATGGCTGGCAGGCTTTGATTTTGAAATTAAAGTGATAGCGCGCATCCCTGAGCAGTAA", + "dna_sequence_length": 396, + "functions": [ + "UPF0131 family protein" + ], + "id": "CDS_4165", + "location": [ + [ + "NC_000913", + 4473209, + "-", + 396 + ] + ], + "md5": "c156a97729b1a158fcceafe6b7aef21d", + "parent_gene": "", + "protein_md5": "2bdec6e0c2bd6de2c717398f08792998", + "protein_translation": "MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013909" + ], + [ + "gene_synonym", + "ECK4243" + ], + [ + "gene_synonym", + "EcoGene:EG12528" + ], + [ + "gene_synonym", + "GI:16132071" + ], + [ + "gene_synonym", + "GeneID:948765" + ], + [ + "gene_synonym", + "JW4207" + ], + [ + "gene_synonym", + "NP_418670.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39333" + ], + [ + "gene_synonym", + "b4249" + ], + [ + "gene_synonym", + "bdcA" + ], + [ + "gene_synonym", + "yjgI" + ] + ], + "dna_sequence": "ATGGGCGCTTTTACAGGTAAGACAGTTCTCATCCTCGGTGGCAGTCGTGGTATCGGTGCCGCTATCGTACGTCGTTTCGTCACCGATGGGGCCAATGTACGATTCACCTATGCGGGGTCGAAAGATGCCGCTAAACGCCTGGCACAAGAGACTGGAGCGACAGCAGTATTCACAGATAGTGCTGACAGAGACGCTGTCATTGATGTCGTTCGTAAGAGCGGCGCATTGGATATCCTGGTGGTAAATGCAGGTATTGGCGTCTTTGGCGAGGCCCTGGAATTAAATGCCGACGATATTGATCGCCTTTTCAAAATCAATATTCATGCTCCTTATCATGCCTCTGTTGAAGCCGCCCGGCAGATGCCCGAAGGCGGGCGCATCTTAATCATCGGCTCCGTGAATGGCGATCGTATGCCTGTTGCAGGCATGGCTGCTTATGCCGCCAGCAAATCTGCCCTGCAAGGCATGGCGCGCGGGCTGGCCCGTGATTTTGGACCGCGTGGGATCACCATTAACGTCGTCCAGCCAGGGCCAATTGATACCGACGCTAATCCCGCCAACGGGCCAATGCGCGATATGTTGCATAGTTTGATGGCTATCAAAAGACATGGGCAACCGGAAGAGGTCGCTGGTATGGTCGCATGGTTAGCAGGGCCAGAAGCCAGTTTTGTTACCGGCGCGATGCATACCATTGATGGCGCGTTTGGCGCATAA", + "dna_sequence_length": 714, + "functions": [ + "c-di-GMP-binding biofilm dispersal mediator protein" + ], + "id": "CDS_4166", + "location": [ + [ + "NC_000913", + 4474053, + "-", + 714 + ] + ], + "md5": "83d9f9fb49f768fcd513f8226d5c60d3", + "parent_gene": "", + "protein_md5": "8fb2e1baeb2e2ef474c7f5e27d88e91b", + "protein_translation": "MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA", + "protein_translation_length": 237, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013918" + ], + [ + "gene_synonym", + "ECK4244" + ], + [ + "gene_synonym", + "EcoGene:EG12529" + ], + [ + "gene_synonym", + "GI:90111712" + ], + [ + "gene_synonym", + "GeneID:948775" + ], + [ + "gene_synonym", + "JW4208" + ], + [ + "gene_synonym", + "NP_418672.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39334" + ], + [ + "gene_synonym", + "b4251" + ], + [ + "gene_synonym", + "bdcR" + ], + [ + "gene_synonym", + "yjgJ" + ] + ], + "dna_sequence": "ATGGTCACTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTAACCCCCCGAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTGGTTGAGGTATTAAAAGAAGCGGCGCGCAGATATAGCCAAAACGGCGGCTGCGCTGGCTGTATGGTTCTTGAAGGTATTCATAGTCATGATCCACAAGCGCGTGATATTGCCGTTCAATATTATCACGCCGCAGAAACGACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGA", + "dna_sequence_length": 594, + "functions": [ + "transcriptional repressor for divergent bdcA" + ], + "id": "CDS_4167", + "location": [ + [ + "NC_000913", + 4474124, + "+", + 594 + ] + ], + "md5": "09506d0070c696253fb4818e81b93636", + "parent_gene": "", + "protein_md5": "3d49f8d590c20e84f8e85aedf5b38d3f", + "protein_translation": "MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013921" + ], + [ + "gene_synonym", + "ECK4245" + ], + [ + "gene_synonym", + "EcoGene:EG12530" + ], + [ + "gene_synonym", + "GI:90111713" + ], + [ + "gene_synonym", + "GeneID:948777" + ], + [ + "gene_synonym", + "JW5756" + ], + [ + "gene_synonym", + "NP_418673.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF96" + ], + [ + "gene_synonym", + "b4252" + ], + [ + "gene_synonym", + "tabA" + ], + [ + "gene_synonym", + "yjgK" + ] + ], + "dna_sequence": "ATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAGCATATCAAAGCACACGTTACGGCAGAAACGCCAAAGGGCAAGCACGATATCGAAGGCAATCGACTGTTTTATCTTATCTCGGAAGATATGACCGAGCCGTACGAAGCTCGCCGTGCGGAGTACCATGCCCGCTATCTTGACATTCAGATTGTGTTAAAAGGTCAGGAAGGCATGACCTTCAGCACGCAACCTGCAGGCGCGCCGGATACCGACTGGTTAGCTGATAAAGACATCGCATTTTTGCCGGAAGGCGTTGATGAGAAAACAGTTATTCTAAATGAAGGTGATTTTGTTGTGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGA", + "dna_sequence_length": 453, + "functions": [ + "biofilm modulator regulated by toxins", + "DUF386 family protein, cupin superfamily protein" + ], + "id": "CDS_4168", + "location": [ + [ + "NC_000913", + 4474862, + "+", + 453 + ] + ], + "md5": "67822e21a9e65ff869cb8ad86ffc0c02", + "parent_gene": "", + "protein_md5": "8e18647357463a0449b1373d616a32b7", + "protein_translation": "MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA", + "protein_translation_length": 150, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013925" + ], + [ + "gene_synonym", + "ECK4246" + ], + [ + "gene_synonym", + "EcoGene:EG12531" + ], + [ + "gene_synonym", + "GI:90111714" + ], + [ + "gene_synonym", + "GeneID:948776" + ], + [ + "gene_synonym", + "JW5757" + ], + [ + "gene_synonym", + "NP_418674.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39336" + ], + [ + "gene_synonym", + "b4253" + ], + [ + "gene_synonym", + "yjgL" + ] + ], + "dna_sequence": "ATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGGAAGTCCTTTGAAAGAAAAGATGAGAGTTCATTACACCTGATTACTAACAAGGTTCTGGCGTGTTACCAAAGTGAAGCTAACAAGAAAATAGCGCGTCTATTAAATAATAATCAGGAGTTAAATAATCTACAGAAATTAAATAATCTACAGAAGTTAAATAATCTACTGAAGTTAAATAATATACAGGGGTTAAATAATCCTCAGGAGTTAAATAATCCGCAGAATTTAAATGATTCTCAGGAGTTAAATAACTCGCAGGAATTAAATAGTCCACAGGAGTTAAATGATCCGCAGGAGTTAAATAATTCTCAGGACTTAAATAACTCTAAGGTGAGTTGTACAGTTTCAGTTGATTCTACGATTACGGGTTTATTAAAAGAACCATTGAATAATGCATTATTAGCAATAAGGAACGAACATCTGCTATTAATGCCTCATGTATGTGATGAATCGATTTCATACTTACTGGGCGAAAAAGGTATACTTGAAGAAATAGATAAGCTCTACGCATTAAATGATCACGGAATTGATAATGACAAAGTAGGTAACAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAGATAAAGCATGCATGCTCCGTAATAAATCATATTAATCTTCGCAGCGATCAGTCTAAAATAGCTGAGACATTATTTTTCAATCTCGATAAAGAACCCTATAAAAATAGCCCTGAATTACAGGGGTTGATTTGGAATAAGTTGGTTGTATATGTCAATGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAGATGATTAATTGGTACTTCCCTCAGTTACTTAAGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA", + "dna_sequence_length": 1815, + "functions": [ + "SopA-central-domain-like hexapeptide repeat protein" + ], + "id": "CDS_4169", + "location": [ + [ + "NC_000913", + 4475437, + "+", + 1815 + ] + ], + "md5": "a2cbac4a98bd70a0c416faf30881dcb1", + "parent_gene": "", + "protein_md5": "3acf9a02305d661c4b0ed457e46fb939", + "protein_translation": "MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA", + "protein_translation_length": 604, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013927" + ], + [ + "gene_synonym", + "ECK4247" + ], + [ + "gene_synonym", + "EcoGene:EG10069" + ], + [ + "gene_synonym", + "GI:16132076" + ], + [ + "gene_synonym", + "GeneID:948774" + ], + [ + "gene_synonym", + "JW4211" + ], + [ + "gene_synonym", + "NP_418675.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04391" + ], + [ + "gene_synonym", + "argI" + ], + [ + "gene_synonym", + "b4254" + ] + ], + "dna_sequence": "ATGTCCGGGTTTTATCATAAGCATTTCCTGAAATTACTCGATTTCACGCCAGCTGAACTCAACAGCCTGCTGCAGTTAGCCGCGAAGCTGAAAGCCGATAAGAAAAGCGGTAAAGAAGAAGCCAAACTCACTGGTAAAAACATCGCGCTCATCTTCGAAAAAGACTCGACTCGTACCCGATGCTCTTTCGAAGTTGCCGCATATGACCAGGGTGCTCGCGTTACTTATCTCGGCCCAAGCGGCAGCCAGATTGGTCATAAAGAGTCGATTAAAGACACTGCCCGCGTGCTTGGTCGCATGTATGACGGTATTCAGTATCGCGGCTATGGTCAGGAGATTGTCGAAACACTGGCGGAATACGCTAGCGTGCCGGTATGGAATGGCCTGACCAATGAGTTCCATCCCACGCAGCTGCTGGCGGATCTTCTCACCATGCAGGAGCATTTGCCCGGCAAAGCGTTCAACGAAATGACGCTGGTCTATGCAGGTGACGCGCGTAACAACATGGGCAATTCGATGCTCGAAGCTGCGGCGCTTACCGGTCTGGATTTGCGTCTGGTCGCGCCACAAGCGTGCTGGCCGGAAGCTGCGCTGGTTACGGAATGCCGCGCCCTGGCACAGCAAAATGGTGGGAATATTACGCTGACTGAAGATGTCGCGAAGGGAGTTGAAGGTGCTGACTTTATCTATACCGATGTGTGGGTGTCGATGGGGGAAGCAAAAGAGAAATGGGCGGAACGGATTGCATTGCTGCGTGAATATCAGGTGAACAGCAAGATGATGCAGTTGACCGGTAACCCGGAGGTCAAATTCCTCCACTGCCTGCCCGCGTTTCATGACGACCAAACGACGCTTGGCAAGAAAATGGCGGAAGAATTTGGCCTACATGGCGGTATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAA", + "dna_sequence_length": 1005, + "functions": [ + "ornithine carbamoyltransferase 1" + ], + "id": "CDS_4170", + "location": [ + [ + "NC_000913", + 4478311, + "-", + 1005 + ] + ], + "md5": "f9a9af7a7f97386c333c920d674785c2", + "parent_gene": "", + "protein_md5": "8e061b03736136d32fd4f4485c8e72dc", + "protein_translation": "MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK", + "protein_translation_length": 334, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013936" + ], + [ + "gene_synonym", + "ECK4248" + ], + [ + "gene_synonym", + "EcoGene:EG12453" + ], + [ + "gene_synonym", + "GI:16132077" + ], + [ + "gene_synonym", + "GeneID:948773" + ], + [ + "gene_synonym", + "JW4212" + ], + [ + "gene_synonym", + "NP_418676.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF90" + ], + [ + "gene_synonym", + "b4255" + ], + [ + "gene_synonym", + "rraB" + ], + [ + "gene_synonym", + "yjgD" + ] + ], + "dna_sequence": "ATGGCAAACCCGGAACAACTGGAAGAACAGCGTGAAGAAACACGTTTGATTATTGAAGAATTACTGGAAGATGGCAGCGATCCGGACGCGCTGTACACCATCGAACACCATCTTTCCGCAGACGATCTGGAAACCCTGGAAAAAGCAGCAGTTGAAGCGTTTAAACTCGGTTACGAAGTGACCGATCCAGAAGAGCTGGAAGTTGAAGATGGTGATATCGTGATTTGCTGCGACATCCTCAGCGAGTGCGCGTTGAATGCCGATCTGATCGATGCCCAGGTTGAACAACTGATGACGCTGGCAGAGAAATTTGACGTTGAGTACGACGGATGGGGCACTTACTTTGAAGATCCTAACGGCGAAGATGGCGACGATGAAGATTTTGTCGATGAAGACGATGACGGAGTTCGCCACTAA", + "dna_sequence_length": 417, + "functions": [ + "protein inhibitor of RNase E" + ], + "id": "CDS_4171", + "location": [ + [ + "NC_000913", + 4478473, + "+", + 417 + ] + ], + "md5": "91e39baa29a9bda69c5049cfc0991c59", + "parent_gene": "", + "protein_md5": "c1ce4550f2fd26228902b5e45090e656", + "protein_translation": "MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH", + "protein_translation_length": 138, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013939" + ], + [ + "gene_synonym", + "ECK4249" + ], + [ + "gene_synonym", + "EcoGene:EG12532" + ], + [ + "gene_synonym", + "GI:49176479" + ], + [ + "gene_synonym", + "GeneID:948772" + ], + [ + "gene_synonym", + "JW5758" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39337" + ], + [ + "gene_synonym", + "YP_026287.1" + ], + [ + "gene_synonym", + "b4256" + ], + [ + "gene_synonym", + "yjgM" + ] + ], + "dna_sequence": "ATGAATAACATTGCGCCGCAATCACCTGTAATGCGTCGCCTGACGCTGCAGGATAATCCTGCTATCGCCCGCGTCATTCGTCAGGTATCCGCCGAATACGGTCTTACCGCTGATAAAGGCTACACCGTCGCCGATCCGAATCTTGACGAGCTGTATCAAGTATATAGTCAGCCTGGCCATGCATATTGGGTCGTTGAGTACGAGGGTGAAGTGGTCGGCGGCGGTGGGATAGCGCCATTAACCGGGAGTGAGTCGGATATTTGCGAACTGCAAAAGATGTATTTTCTTCCGGCTATCCGCGGCAAAGGGCTGGCAAAAAAACTGGCCTTAATGGCGATGGAGCAGGCGCGAGAGATGGGTTTCAAACGCTGCTATCTGGAAACGACCGCTTTTTTAAAGGAAGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGATTGTGAAGTGCGGATGTTGCGCGAACTCTAA", + "dna_sequence_length": 504, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_4172", + "location": [ + [ + "NC_000913", + 4479537, + "-", + 504 + ] + ], + "md5": "94546f60105250123f483fecca42f58a", + "parent_gene": "", + "protein_md5": "83d579ef1486845a388edbf2bebce479", + "protein_translation": "MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013944" + ], + [ + "gene_synonym", + "ECK4250" + ], + [ + "gene_synonym", + "EcoGene:EG12533" + ], + [ + "gene_synonym", + "GI:49176480" + ], + [ + "gene_synonym", + "GeneID:948784" + ], + [ + "gene_synonym", + "JW5759" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39338" + ], + [ + "gene_synonym", + "YP_026288.1" + ], + [ + "gene_synonym", + "b4257" + ], + [ + "gene_synonym", + "yjgN" + ] + ], + "dna_sequence": "ATGGCTCAAGTTATTAATGAAATGGATGTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTATTTGTGTGGTGAATGTGTTGTTAACGATTATAACGCTAGGTATCTATTTACCATGGGCATTAATGAAATGTAAGCGTTATCTTTATGCTAATATGGAAGTTAACGGACAACGATTTTCTTATGGAATTACCGGTGGGAATGTTTTTGTTAGTTGTCTTTTTTTTGTTTTTTTCTATTTCGCAATCTTAATGACAGTGTCAGCAGATATGCCGCTTGTTGGTTGTGTTTTGACTTTGTTACTGTTGGTTTTGCTTATATTTATGGCAGCAAAAGGACTGCGTCATCAGGCCTTAATGACCAGTCTCAACGGCGTAAGATTTAGTTTTAATTGCTCTATGAAAGGGTTCTGGTGGGTGACCTTTTTCTTGCCGATTTTAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTACTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCTTTTCTCGCTGTTGCTGGTTATATTATCTTCGATCAAATATTAAATGCGTATGATAGTTCTGTATATGCAAATGATGACATTGAGAATTTACAGCAATTTATGGAAATGCAACGTAAAATGATAATCGCGCAGTTAATCTATTATTTTGGGATTGCTGTTAGCACAAGTTATTTAACGGTGTCTTTGCGAAACCATTTTATGAGCAACCTGTCACTGAATGATGGGCGTATTCGTTTTCGCTTAACTTTAACGTACCACGGTATGCTTTATCGCATGTGTGCGTTGGTGGTGATATCCGGGATTACGGGCGGTCTGGCTTATCCACTGCTGAAAATATGGATGATTGACTGGCAGGCAAAAAATACGTATTTGCTGGGCGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAA", + "dna_sequence_length": 1197, + "functions": [ + "DUF898 family inner membrane protein" + ], + "id": "CDS_4173", + "location": [ + [ + "NC_000913", + 4479730, + "+", + 1197 + ] + ], + "md5": "ac3539526c9dec7799ad2b95cc3578f4", + "parent_gene": "", + "protein_md5": "eeb381ed949b8e04d4b4393f6cb20b45", + "protein_translation": "MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL", + "protein_translation_length": 398, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013946" + ], + [ + "gene_synonym", + "ECK4251" + ], + [ + "gene_synonym", + "EcoGene:EG11067" + ], + [ + "gene_synonym", + "GI:16132080" + ], + [ + "gene_synonym", + "GeneID:948785" + ], + [ + "gene_synonym", + "JW4215" + ], + [ + "gene_synonym", + "NP_418679.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07118" + ], + [ + "gene_synonym", + "b4258" + ], + [ + "gene_synonym", + "val-act" + ], + [ + "gene_synonym", + "valS" + ] + ], + "dna_sequence": "ATGGAAAAGACATATAACCCACAAGATATCGAACAGCCGCTTTACGAGCACTGGGAAAAGCAGGGCTACTTTAAGCCTAATGGCGATGAAAGCCAGGAAAGTTTCTGCATCATGATCCCGCCGCCGAACGTCACCGGCAGTTTGCATATGGGTCACGCCTTCCAGCAAACCATCATGGATACCATGATCCGCTATCAGCGCATGCAGGGCAAAAACACCCTGTGGCAGGTCGGTACTGACCACGCCGGGATCGCTACCCAGATGGTCGTTGAGCGCAAGATTGCCGCAGAAGAAGGTAAAACCCGTCACGACTACGGCCGCGAAGCTTTCATCGACAAAATCTGGGAATGGAAAGCGGAATCTGGCGGCACCATTACCCGTCAGATGCGCCGTCTCGGCAACTCCGTCGACTGGGAGCGTGAACGCTTCACCATGGACGAAGGCCTGTCCAATGCGGTGAAAGAAGTTTTCGTTCGTCTGTATAAAGAAGACCTGATTTACCGTGGCAAACGCCTGGTAAACTGGGATCCGAAACTGCGCACCGCTATCTCTGACCTGGAAGTCGAAAACCGCGAATCGAAAGGTTCGATGTGGCACATCCGCTATCCGCTGGCTGACGGTGCGAAAACCGCAGACGGTAAAGATTATCTGGTGGTCGCGACTACCCGTCCAGAAACCCTGCTGGGCGATACTGGCGTAGCCGTTAACCCGGAAGATCCGCGTTACAAAGATCTGATTGGCAAATATGTCATTCTGCCGCTGGTTAACCGTCGTATTCCGATCGTTGGCGACGAACACGCCGACATGGAAAAAGGCACCGGCTGCGTGAAAATCACTCCGGCGCACGACTTTAACGACTATGAAGTGGGTAAACGTCACGCCCTGCCGATGATCAACATCCTGACCTTTGACGGCGATATCCGTGAAAGCGCCCAGGTGTTCGATACCAAAGGTAACGAATCTGACGTTTATTCCAGCGAAATCCCTGCAGAGTTCCAGAAACTGGAGCGTTTTGCTGCACGTAAAGCAGTCGTTGCCGCAGTTGACGCGCTTGGCCTGCTGGAAGAAATTAAACCGCACGACCTGACCGTTCCTTACGGCGACCGTGGCGGCGTAGTTATCGAACCAATGCTGACCGACCAGTGGTACGTGCGTGCCGATGTCCTGGCGAAACCGGCGGTTGAAGCGGTTGAGAACGGCGACATTCAGTTCGTACCGAAGCAGTACGAAAACATGTACTTCTCCTGGATGCGCGATATTCAGGACTGGTGTATCTCTCGTCAGTTGTGGTGGGGTCACCGTATCCCGGCATGGTATGACGAAGCGGGTAACGTTTATGTTGGCCGCAACGAAGACGAAGTGCGTAAAGAAAATAACCTCGGTGCTGATGTTGTCCTGCGTCAGGACGAAGACGTTCTCGATACCTGGTTCTCTTCTGCGCTGTGGACCTTCTCTACCCTTGGCTGGCCGGAAAATACCGACGCCCTGCGTCAGTTCCACCCAACCAGCGTGATGGTATCTGGTTTCGACATCATTTTCTTCTGGATTGCCCGCATGATCATGATGACCATGCACTTCATCAAAGATGAAAATGGCAAACCGCAGGTGCCGTTCCACACCGTTTACATGACCGGCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATGGTTGACGGTATTTCGCTGCCAGAACTGCTGGAAAAACGTACCGGCAATATGATGCAGCCGCAGCTGGCGGACAAAATCCGTAAGCGCACCGAGAAGCAGTTCCCGAACGGTATTGAGCCGCACGGTACTGACGCGCTGCGCTTCACCCTGGCGGCGCTGGCGTCTACCGGTCGTGACATCAACTGGGATATGAAGCGTCTGGAAGGTTACCGTAACTTCTGTAACAAGCTGTGGAACGCCAGCCGCTTTGTGCTGATGAACACAGAAGGTCAGGATTGCGGCTTCAACGGCGGCGAAATGACGCTGTCGCTGGCGGACCGCTGGATTCTGGCGGAGTTCAACCAGACCATCAAAGCGTACCGCGAAGCGCTGGACAGCTTCCGCTTCGATATCGCCGCAGGCATTCTGTATGAGTTCACCTGGAACCAGTTCTGTGACTGGTATCTCGAGCTGACCAAGCCGGTAATGAACGGTGGCACCGAAGCAGAACTGCGCGGTACTCGCCATACGCTGGTGACTGTACTGGAAGGTCTGCTGCGCCTCGCGCATCCGATCATTCCGTTCATCACCGAAACCATCTGGCAGCGTGTGAAAGTACTTTGCGGTATCACTGCCGACACCATCATGCTGCAGCCGTTCCCGCAGTACGATGCATCTCAGGTTGATGAAGCCGCACTGGCCGACACCGAATGGCTGAAACAGGCGATCGTTGCGGTACGTAACATCCGTGCAGAAATGAACATCGCGCCGGGCAAACCGCTGGAGCTGCTGCTGCGTGGTTGCAGCGCGGATGCAGAACGTCGCGTAAATGAAAACCGTGGCTTCCTGCAAACCCTGGCGCGTCTGGAAAGTATCACCGTGCTGCCTGCCGATGACAAAGGTCCGGTTTCCGTTACGAAGATCATCGACGGTGCAGAGCTGCTGATCCCGATGGCTGGCCTCATCAACAAAGAAGATGAGCTGGCGCGTCTGGCGAAAGAAGTGGCGAAGATTGAAGGTGAAATCAGCCGTATCGAGAACAAACTGGCGAACGAAGGCTTTGTCGCCCGCGCACCGGAAGCGGTCATCGCGAAAGAGCGTGAGAAGCTGGAAGGCTATGCGGAAGCGAAAGCGAAACTGATTGAACAGCAGGCTGTTATCGCCGCGCTGTAA", + "dna_sequence_length": 2856, + "functions": [ + "valyl-tRNA synthetase" + ], + "id": "CDS_4174", + "location": [ + [ + "NC_000913", + 4483837, + "-", + 2856 + ] + ], + "md5": "b69dae1285d5b10be47faca863f7fce9", + "parent_gene": "", + "protein_md5": "49d56ab928bea53c521c5ab492835eaf", + "protein_translation": "MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL", + "protein_translation_length": 951, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013948" + ], + [ + "gene_synonym", + "ECK4252" + ], + [ + "gene_synonym", + "EcoGene:EG11413" + ], + [ + "gene_synonym", + "GI:16132081" + ], + [ + "gene_synonym", + "GeneID:948787" + ], + [ + "gene_synonym", + "JW4216" + ], + [ + "gene_synonym", + "NP_418680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28905" + ], + [ + "gene_synonym", + "b4259" + ], + [ + "gene_synonym", + "holC" + ] + ], + "dna_sequence": "ATGAAAAACGCGACGTTCTACCTTCTGGACAATGACACCACCGTCGATGGCTTAAGCGCCGTTGAGCAACTGGTGTGTGAAATTGCCGCAGAACGTTGGCGCAGCGGTAAGCGCGTGCTCATCGCCTGTGAAGATGAAAAGCAGGCTTACCGGCTGGATGAAGCCCTGTGGGCGCGTCCGGCAGAAAGCTTTGTTCCGCATAATTTAGCGGGAGAAGGACCGCGCGGCGGTGCACCGGTGGAGATCGCCTGGCCGCAAAAGCGTAGCAGCAGCCGGCGCGATATATTGATTAGTCTGCGAACAAGCTTTGCAGATTTTGCCACCGCTTTCACAGAAGTGGTAGACTTCGTTCCTTATGAAGATTCTCTGAAACAACTGGCGCGCGAACGCTATAAAGCCTACCGCGTGGCTGGTTTCAACCTGAATACGGCAACCTGGAAATAA", + "dna_sequence_length": 444, + "functions": [ + "DNA polymerase III, chi subunit" + ], + "id": "CDS_4175", + "location": [ + [ + "NC_000913", + 4484280, + "-", + 444 + ] + ], + "md5": "a8088a80a043dbef8079fa07bf01a0c0", + "parent_gene": "", + "protein_md5": "73e440d3b37bece233f6f8c9b7987fe1", + "protein_translation": "MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013953" + ], + [ + "gene_synonym", + "ECK4253" + ], + [ + "gene_synonym", + "EcoGene:EG10694" + ], + [ + "gene_synonym", + "GI:16132082" + ], + [ + "gene_synonym", + "GeneID:948791" + ], + [ + "gene_synonym", + "JW4217" + ], + [ + "gene_synonym", + "NP_418681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68767" + ], + [ + "gene_synonym", + "b4260" + ], + [ + "gene_synonym", + "carP" + ], + [ + "gene_synonym", + "pepA" + ], + [ + "gene_synonym", + "xerB" + ] + ], + "dna_sequence": "ATGGAGTTTAGTGTAAAAAGCGGTAGCCCGGAGAAACAGCGGAGTGCCTGCATCGTCGTGGGCGTCTTCGAACCACGTCGCCTTTCTCCGATTGCAGAACAGCTCGATAAAATCAGCGATGGGTACATCAGCGCCCTGCTACGTCGGGGCGAACTGGAAGGAAAACCGGGGCAGACATTGTTGCTGCACCATGTTCCGAATGTACTTTCCGAGCGAATTCTCCTTATTGGTTGCGGCAAAGAACGTGAGCTGGATGAGCGTCAGTACAAGCAGGTTATTCAGAAAACCATTAATACGCTGAATGATACTGGCTCAATGGAAGCGGTCTGCTTTCTGACTGAGCTGCACGTTAAAGGCCGTAACAACTACTGGAAAGTGCGTCAGGCTGTCGAGACGGCAAAAGAGACGCTCTACAGTTTCGATCAGCTGAAAACGAACAAGAGCGAACCGCGTCGTCCGCTGCGTAAGATGGTGTTCAACGTGCCGACCCGCCGTGAACTGACCAGCGGTGAGCGCGCGATCCAGCACGGTCTGGCGATTGCCGCCGGGATTAAAGCAGCAAAAGATCTCGGCAATATGCCGCCGAATATCTGTAACGCCGCTTACCTCGCTTCACAAGCGCGCCAGCTGGCTGACAGCTACAGCAAGAATGTCATCACCCGCGTTATCGGCGAACAGCAGATGAAAGAGCTGGGGATGCATTCCTATCTGGCGGTCGGTCAGGGTTCGCAAAACGAATCGCTGATGTCGGTGATTGAGTACAAAGGCAACGCGTCGGAAGATGCACGCCCAATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGATGAGATGAAGTACGATATGTGCGGTGCGGCAGCGGTTTACGGCGTGATGCGGATGGTCGCGGAGCTACAACTGCCGATTAACGTTATCGGCGTGTTGGCAGGCTGCGAAAACATGCCTGGCGGACGAGCCTATCGTCCGGGCGATGTGTTAACCACCATGTCCGGTCAAACCGTTGAAGTGCTGAACACCGACGCTGAAGGCCGCCTGGTACTGTGCGACGTGTTAACTTACGTTGAGCGTTTTGAGCCGGAAGCGGTGATTGACGTGGCGACGCTGACCGGTGCCTGCGTGATCGCGCTGGGTCATCATATTACTGGTCTGATGGCGAACCATAATCCGCTGGCCCATGAACTGATTGCCGCGTCTGAACAATCCGGTGACCGCGCATGGCGCTTACCGCTGGGTGACGAGTATCAGGAACAACTGGAGTCCAATTTTGCCGATATGGCGAACATTGGCGGTCGTCCTGGTGGGGCGATTACCGCAGGTTGCTTCCTGTCACGCTTTACCCGTAAGTACAACTGGGCGCACCTGGATATCGCCGGTACCGCCTGGCGTTCTGGTAAAGCAAAAGGCGCCACCGGTCGTCCGGTAGCGTTGCTGGCACAGTTCCTGTTAAACCGCGCTGGGTTTAACGGCGAAGAGTAA", + "dna_sequence_length": 1512, + "functions": [ + "multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor" + ], + "id": "CDS_4176", + "location": [ + [ + "NC_000913", + 4485951, + "-", + 1512 + ] + ], + "md5": "ce99850e7d06a51d9cfa5ae21ff8174a", + "parent_gene": "", + "protein_md5": "265d817054fc93eac46c9c4d888ed0e2", + "protein_translation": "MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE", + "protein_translation_length": 503, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013958" + ], + [ + "gene_synonym", + "ECK4254" + ], + [ + "gene_synonym", + "EcoGene:EG12535" + ], + [ + "gene_synonym", + "GI:16132083" + ], + [ + "gene_synonym", + "GeneID:948795" + ], + [ + "gene_synonym", + "JW4218" + ], + [ + "gene_synonym", + "NP_418682.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF98" + ], + [ + "gene_synonym", + "b4261" + ], + [ + "gene_synonym", + "lptF" + ], + [ + "gene_synonym", + "yjgP" + ] + ], + "dna_sequence": "GTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGTTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATCGTAGCGGCGGTTAACGTGATGTGGGCGGGACCGTGGTCATCGCGTCATCAGGATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTGGCCGATTCCGGACATTTAACCCAGCTGCGCGACGGCTCCCAGGTCGTCACTCTCAACCAGGGAACGCGCTTCGAAGGCACTGCATTGTTACGTGATTTCCGCATTACGGACTTCCAGGATTATCAGGCGATCATTGGTCACCAGGCGGTGGCGCTCGACCCGAACGATACCGACCAGATGGACATGCGCACATTGTGGAACACTGACACCGATCGTGCTCGCGCAGAACTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGA", + "dna_sequence_length": 1101, + "functions": [ + "lipopolysaccharide export ABC permease" + ], + "id": "CDS_4177", + "location": [ + [ + "NC_000913", + 4486218, + "+", + 1101 + ] + ], + "md5": "a2ae530d95a606e8232730004825cdb1", + "parent_gene": "", + "protein_md5": "f4ff6dc96b1878923d1425f335eb7815", + "protein_translation": "MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV", + "protein_translation_length": 366, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013960" + ], + [ + "gene_synonym", + "ECK4255" + ], + [ + "gene_synonym", + "EcoGene:EG12536" + ], + [ + "gene_synonym", + "GI:90111715" + ], + [ + "gene_synonym", + "GeneID:945324" + ], + [ + "gene_synonym", + "JW5760" + ], + [ + "gene_synonym", + "NP_418683.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC6" + ], + [ + "gene_synonym", + "b4262" + ], + [ + "gene_synonym", + "lptG" + ], + [ + "gene_synonym", + "yjgQ" + ] + ], + "dna_sequence": "ATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCGTTGCTTGGTCTTGGGATGCTGGCGCAGCGCAGCGAACTGGTGGTGATGCAGGCTTCTGGTTTTACCCGTATGCAGGTGGCGCTGTCGGTGATGAAAACCGCCATTCCGCTGGTCTTGCTGACGATGGCGATTGGCGAATGGGTCGCGCCGCAGGGCGAGCAGATGGCGCGTAACTACCGTGCGCAGGCGATGTACGGCGGCTCGTTGCTCTCTACCCAGCAAGGCTTATGGGCGAAAGATGGCAACAACTTCGTCTACATTGAGCGGGTTAAAGGTGACGAAGAGTTAGGTGGCATCAGCATTTATGCCTTTAACGAGAATCGTCGTCTGCAATCCGTACGCTATGCCGCTACTGCGAAGTTTGACCCGGAACATAAAGTCTGGCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAA", + "dna_sequence_length": 1083, + "functions": [ + "lipopolysaccharide export ABC permease" + ], + "id": "CDS_4178", + "location": [ + [ + "NC_000913", + 4487318, + "+", + 1083 + ] + ], + "md5": "99fd011f7d42841d764d30ae13625d33", + "parent_gene": "", + "protein_md5": "ebd46305b825ee934c2340d3d0707d31", + "protein_translation": "MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS", + "protein_translation_length": 360, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013963" + ], + [ + "gene_synonym", + "ECK4256" + ], + [ + "gene_synonym", + "EcoGene:EG12537" + ], + [ + "gene_synonym", + "GI:16132085" + ], + [ + "gene_synonym", + "GeneID:948978" + ], + [ + "gene_synonym", + "JW4220" + ], + [ + "gene_synonym", + "NP_418684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39342" + ], + [ + "gene_synonym", + "b4263" + ], + [ + "gene_synonym", + "yjgR" + ] + ], + "dna_sequence": "ATGAGTGAACCCCTGTTAATTGCCCGCACGCCGGACACAGAACTGTTTTTACTGCCGGGAATGGCTAACCGTCATGGGCTGATTACCGGCGCAACGGGGACGGGTAAAACCGTTACGCTGCAAAAACTGGCGGAGTCATTGTCGGAAATCGGCGTGCCGGTGTTTATGGCTGATGTGAAAGGCGATCTGACCGGCGTCGCGCAGGCAGGAACGGTGTCGGAAAAACTGCTCGCAAGGCTTAAAAATATCGGCGTCAATGACTGGCAACCGCATGCCAATCCGGTGGTGGTGTGGGATATCTTTGGCGAGAAAGGCCATCCGGTGCGGGCGACGGTTTCGGATCTGGGGCCGCTGTTGCTGGCACGACTGTTGAATCTCAACGATGTGCAATCTGGCGTGCTGAATATCATCTTCCGCATTGCTGACGATCAGGGGCTGTTACTGCTCGACTTTAAAGATCTGCGGGCAATTACCCAGTACATCGGCGATAACGCCAAATCCTTCCAGAATCAGTACGGTAATATCAGTAGCGCATCGGTTGGTGCCATCCAGCGCGGGCTGTTGTCGCTGGAACAGCAAGGCGCAGCACACTTCTTTGGTGAGCCGATGCTGGATATCAAAGACTGGATGCGCACCGATGCCAACGGTAAAGGCGTTATCAATATCCTCAGCGCCGAGAAACTTTATCAGATGCCGAAACTGTACGCCGCCAGCCTGCTGTGGATGCTTTCAGAGTTGTATGAACAATTGCCGGAAGCGGGCGATCTGGAGAAACCAAAACTGGTGTTTTTCTTCGACGAGGCACATCTGCTGTTTAACGATGCCCCGCAGGTACTGCTGGATAAGATTGAGCAGGTGATAAGGCTTATTCGCTCAAAAGGCGTGGGCGTCTGGTTCGTTTCGCAAAACCCGTCTGATATTCCGGATAATGTGCTCGGGCAGCTCGGTAATCGCGTTCAACATGCTTTGCGGGCTTTTACGCCAAAAGATCAGAAAGCAGTGAAGGCAGCGGCGCAAACCATGCGGGCCAATCCGGCGTTTGATACCGAAAAGGCGATTCAGGAACTGGGCACCGGCGAGGCGTTGATCTCTTTTCTGGATGCGAAAGGAAGCCCTTCTGTGGTGGAGCGTGCGATGGTGATCGCGCCTTGTTCGCGGATGGGGCCGGTGACGGAAGATGAGCGTAATGGCTTGATTAATCACTCTCCGGTGTATGGCAAATATGAGGATGAGGTGGACCGGGAATCCGCCTATGAGATGTTGCAAAAAGGCTTTCAGGCCAGTACCGAGCAGCAAAATAATCCTCCCGCGAAAGGGAAAGAGGTAGCGGTGGATGACGGCATTCTTGGTGGATTGAAGGATATTTTGTTCGGCACTACCGGACCACGCGGCGGGAAGAAAGATGGTGTGGTGCAAACAATGGCCAAAAGCGCCGCTCGCCAAGTGACGAATCAGATTGTACGCGGGATGTTGGGGAGTTTGCTGGGGGGGAGAAGAAGGTAA", + "dna_sequence_length": 1503, + "functions": [ + "DUF853 family protein with NTPase fold" + ], + "id": "CDS_4179", + "location": [ + [ + "NC_000913", + 4490063, + "-", + 1503 + ] + ], + "md5": "adf27d90df6522327637b7c4a3520842", + "parent_gene": "", + "protein_md5": "5a1860d65fe4b0e401f478dec2d95bca", + "protein_translation": "MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAQAGTVSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013966" + ], + [ + "gene_synonym", + "ECK4257" + ], + [ + "gene_synonym", + "EcoGene:EG12538" + ], + [ + "gene_synonym", + "GI:16132086" + ], + [ + "gene_synonym", + "GeneID:949058" + ], + [ + "gene_synonym", + "JW4221" + ], + [ + "gene_synonym", + "NP_418685.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39343" + ], + [ + "gene_synonym", + "b4264" + ], + [ + "gene_synonym", + "gntH" + ], + [ + "gene_synonym", + "gntS?" + ], + [ + "gene_synonym", + "idnR" + ], + [ + "gene_synonym", + "yjgS" + ] + ], + "dna_sequence": "ATGCGCAATCACAGAATTTCTTTACAGGATATCGCTACGCTGGCTGGCGTAACAAAAATGACCGTGAGTCGTTATATCCGCTCGCCGAAAAAGGTGGCAAAGGAAACAGGCGAGCGCATCGCCAAAATTATGGAAGAGATCAATTATATCCCTAATCGCGCTCCCGGCATGTTGTTGAATGCACAAAGTTATACCCTCGGTATCTTGATTCCGTCATTTCAAAATCAACTCTTCGCTGACATTCTCGCGGGAATAGAATCCGTCACCTCTGAGCATAATTATCAGACCCTTATTGCTAATTACAATTACGATCGCGATTCCGAAGAAGAGTCGGTGATTAACCTGCTCTCTTATAACATTGACGGGATTATACTTTCGGAAAAATATCACACCATCAGGACGGTGAAATTTCTGCGTTCAGCCACCATTCCGGTCGTGGAATTGATGGATGTACAGGGAGAACGGCTGGATATGGAGGTCGGTTTTGATAATCGGCAGGCCGCTTTTGACATGGTGTGTACCATGCTGGAGAAGCGAGTCAGGCACAAAATTCTGTATCTCGGTTCCAAAGATGACACCCGCGATGAACAGCGTTATCAGGGGTATTGCGATGCGATGATGCTGCATAATCTTTCCCCATTACGCATGAATCCACGCGCCATCTCATCCATTCATTTAGGAATGCAGTTAATGCGTGATGCCCTTAGCGCAAACCCGGATTTAGACGGTGTATTTTGCACCAATGACGATATTGCGATGGGTGCGCTTCTGCTGTGCCGCGAGCGAAACCTCGCCGTGCCAGAACAAATTTCCATTGCGGGTTTTCATGGGCTGGAGATTGGCAGGCAAATGATCCCAAGCCTCGCCAGCGTAATTACTCCCCGTTTTGATATTGGTCGGATGGCCGCCCAAATGTTGCTGAGCAAAATTAAAAATAACGATCACAACCACAACACTGTTGACCTCGGGTATCAGATTTATCACGGCAACACGCTTTAG", + "dna_sequence_length": 999, + "functions": [ + "transcriptional repressor, 5-gluconate-binding" + ], + "id": "CDS_4180", + "location": [ + [ + "NC_000913", + 4491139, + "-", + 999 + ] + ], + "md5": "e584f3f787eb947133186e307b3e612a", + "parent_gene": "", + "protein_md5": "75a2facc22cbb3aaaff061320cf7a8a6", + "protein_translation": "MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013969" + ], + [ + "gene_synonym", + "ECK4258" + ], + [ + "gene_synonym", + "EcoGene:EG12539" + ], + [ + "gene_synonym", + "GI:16132087" + ], + [ + "gene_synonym", + "GeneID:948798" + ], + [ + "gene_synonym", + "JW4222" + ], + [ + "gene_synonym", + "NP_418686.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39344" + ], + [ + "gene_synonym", + "b4265" + ], + [ + "gene_synonym", + "gntW" + ], + [ + "gene_synonym", + "idnT" + ], + [ + "gene_synonym", + "yjgT" + ] + ], + "dna_sequence": "ATGCCATTAATCATTATTGCGGCAGGCGTCGCGCTGCTTCTTATCCTGATGATCGGCTTTAAAGTTAACGGCTTTATTGCCCTCGTTCTGGTAGCTGCCGTCGTCGGATTTGCCGAAGGGATGGATGCACAGGCCGTCCTGCACTCTATACAAAATGGTATCGGCAGCACGCTCGGCGGGCTGGCAATGATCCTCGGTTTCGGGGCCATGTTAGGCAAGCTGATTTCTGATACGGGTGCGGCACAACGTATCGCCACTACGCTGATTGCTACTTTTGGTAAAAAACGCGTGCAATGGGCGCTAGTGATCACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACTGTTTTCTGCCGCCACATCCAGGGCCTACTGCCATCGCGACTATCTTTGAGGCTAATCTCGGAACGACTTTACTGTATGGATTTATCATTACCATTCCGACAGTTATTGTCGCAGGACCGCTGTTTTCTAAACTGCTAACTCGCTTTGAGAAAGCACCACCGGAAGGCTTATTTAATCCTCATCTGTTTAGCGAAGAGGAGATGCCCTCCTTCTGGAACAGTATTTTCGCTGCCGTGATCCCGGTCATCCTGATGGCTATCGCCGCCGTTTGTGAAATTACGTTACCGAAAACTAACACCGTGCGCCTCTTCTTTGAATTTGTCGGTAACCCTGCCGTTGCGCTGTTTATTGCCATTGTTATTGCGATTTTCACACTGGGCCGACGTAATGGACGCACCATCGAGCAAATCATGGATATCATTGGGGATTCTATAGGCGCTATCGCGATGATTGTGTTTATTATCGCTGGCGGCGGCGCGTTTAAGCAGGTATTAGTAGATAGCGGTGTCGGGCACTATATTTCACACTTAATGACCGGAACTACACTTTCGCCGTTATTGATGTGCTGGACTGTTGCGGCGCTGTTGCGTATCGCTCTGGGCTCTGCCACCGTCGCGGCCATTACCACCGCGGGTGTGGTGTTGCCGATTATCAACGTTACCCATGCCGATCCCGCTTTAATGGTACTGGCAACCGGTGCGGGCAGCGTGATCGCGTCACACGTAAACGACCCTGGCTTCTGGCTATTTAAAGGGTATTTTAATCTGACGGTTGGTGAAACGTTGCGTACCTGGACGGTGATGGAAACCCTTATTTCTATTATGGGTTTGCTGGGCGTGTTAGCCATTAACGCCGTATTGCACTGA", + "dna_sequence_length": 1320, + "functions": [ + "L-idonate and D-gluconate transporter" + ], + "id": "CDS_4181", + "location": [ + [ + "NC_000913", + 4492525, + "-", + 1320 + ] + ], + "md5": "811abfc5fd3961fca658034ef8d9e7d8", + "parent_gene": "", + "protein_md5": "a29555aebeedc02f8e439afdb844e21e", + "protein_translation": "MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGHYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH", + "protein_translation_length": 439, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013971" + ], + [ + "gene_synonym", + "ECK4259" + ], + [ + "gene_synonym", + "EcoGene:EG12540" + ], + [ + "gene_synonym", + "GI:16132088" + ], + [ + "gene_synonym", + "GeneID:947109" + ], + [ + "gene_synonym", + "JW4223" + ], + [ + "gene_synonym", + "NP_418687.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9P9" + ], + [ + "gene_synonym", + "b4266" + ], + [ + "gene_synonym", + "idnO" + ], + [ + "gene_synonym", + "yjgU" + ] + ], + "dna_sequence": "ATGAACGATCTATTTTCACTGGCAGGAAAAAATATCTTGATTACCGGTTCAGCACAGGGCATTGGCTTTTTACTGGCAACCGGCCTGGGTAAATATGGCGCACAAATAATTATTAATGATATTACTGCCGAACGCGCAGAACTTGCTGTAGAAAAACTCCACCAGGAGGGTATTCAGGCCGTTGCCGCACCTTTTAATGTTACTCATAAACATGAAATTGATGCCGCCGTTGAACATATCGAAAAGGACATCGGCCCCATTGATGTGCTGGTGAATAACGCCGGTATCCAGCGCCGTCATCCTTTTACTGAGTTCCCTGAACAAGAGTGGAATGATGTGATCGCAGTAAACCAGACCGCCGTGTTCCTGGTATCGCAAGCGGTAACTCGTCACATGGTTGAACGCAAGGCAGGTAAAGTTATTAATATTTGCTCGATGCAAAGCGAACTGGGACGTGACACCATCACCCCTTATGCCGCATCGAAAGGGGCGGTAAAAATGCTCACCCGCGGCATGTGCGTCGAGCTGGCGCGCCACAATATTCAGGTCAACGGTATTGCGCCGGGCTATTTCAAAACAGAAATGACTAAAGCACTGGTTGAGGACGAAGCCTTCACCGCCTGGTTGTGCAAACGGACCCCCGCCGCACGCTGGGGAGATCCGCAGGAACTGATTGGTGCTGCGGTGTTCCTTTCTTCAAAAGCCTCTGATTTCGTAAACGGCCACCTGTTGTTTGTTGATGGCGGCATGTTAGTGGCTGTTTAA", + "dna_sequence_length": 765, + "functions": [ + "5-keto-D-gluconate-5-reductase" + ], + "id": "CDS_4182", + "location": [ + [ + "NC_000913", + 4493351, + "-", + 765 + ] + ], + "md5": "1669a1d58d3aad57481739af5829c68e", + "parent_gene": "", + "protein_md5": "9c88867cbc70ead29b8ecfa72389d5d4", + "protein_translation": "MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013975" + ], + [ + "gene_synonym", + "ECK4260" + ], + [ + "gene_synonym", + "EcoGene:EG12541" + ], + [ + "gene_synonym", + "GI:16132089" + ], + [ + "gene_synonym", + "GeneID:944769" + ], + [ + "gene_synonym", + "JW4224" + ], + [ + "gene_synonym", + "NP_418688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39346" + ], + [ + "gene_synonym", + "b4267" + ], + [ + "gene_synonym", + "idnD" + ], + [ + "gene_synonym", + "yjgV" + ] + ], + "dna_sequence": "ATGCAAGTGAAAACACAGTCCTGCGTTGTTGCGGGCAAGAAAACTGTTGCCGTTACCGAGCAGACGATAGATTGGAATAATAATGGAACATTAGTACAAATAACCCGAGGTGGAATTTGCGGTTCCGATTTACATTATTATCAGGAAGGAAAAGTAGGTAATTTCATGATAAAGGCACCGATGGTGTTAGGTCATGAAGTTATCGGTAAAGTTATTCATAGCGACTCATCAGAATTACATGAAGGGCAAACGGTAGCCATTAATCCGTCTAAACCGTGCGGTCACTGCAAATACTGCATTGAACATAACGAGAATCAGTGTACAGATATGCGTTTTTTTGGCAGTGCCATGTATTTCCCTCATGTTGATGGTGGTTTTACCCGTTATAAAATGGTCGAAACGTCGCAATGTGTCCCTTATCCGGCCAAAGCTGACGAAAAGGTTATGGCTTTTGCCGAACCTTTAGCCGTCGCGATTCATGCCGCACATCAGGCCGGCGAGTTACAGGGCAAGCGAGTATTTATTTCCGGTGTTGGACCCATTGGCTGCCTGATTGTCAGTGCAGTGAAAACACTGGGGGCCGCGGAAATTGTCTGTGCTGATGTGAGTCCCCGTTCCCTTTCGCTGGGCAAAGAGATGGGGGCGGATGTGCTCGTAAACCCACAAAACGACGACATGGATCACTGGAAAGCGGAAAAAGGCTATTTCGATGTCAGCTTTGAAGTGTCCGGTCATCCTTCATCAGTGAATACCTGTCTGGAGGTCACTCGTGCACGCGGCGTAATGGTGCAGGTAGGTATGGGAGGCGCGATGGCAGAATTCCCAATGATGACGTTGATTGGTAAGGAGATTTCACTCAGAGGCTCTTTCCGTTTTACCAGCGAATTTAATACCGCAGTGTCATGGCTGGCGAATGGCGTTATCAATCCACTGCCTTTACTGAGTGCTGAATATCCCTTCACTGACCTGGAAGAGGCGCTACGTTTCGCCGGTGATAAAACCCAGGCAGCAAAAGTCCAGCTTGTTTTCTAA", + "dna_sequence_length": 1032, + "functions": [ + "L-idonate 5-dehydrogenase, NAD-binding" + ], + "id": "CDS_4183", + "location": [ + [ + "NC_000913", + 4494406, + "-", + 1032 + ] + ], + "md5": "9fb09ba92abb50c858f5947f025ed8c3", + "parent_gene": "", + "protein_md5": "5fc767598f5b606964011ac95f917ab1", + "protein_translation": "MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLRGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013980" + ], + [ + "gene_synonym", + "ECK4261" + ], + [ + "gene_synonym", + "EcoGene:EG12152" + ], + [ + "gene_synonym", + "GI:16132090" + ], + [ + "gene_synonym", + "GeneID:946066" + ], + [ + "gene_synonym", + "JW4225" + ], + [ + "gene_synonym", + "NP_418689.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39208" + ], + [ + "gene_synonym", + "b4268" + ], + [ + "gene_synonym", + "gntV" + ], + [ + "gene_synonym", + "idnK" + ] + ], + "dna_sequence": "ATGGCGGGTGAAAGCTTTATTTTGATGGGCGTTTCAGGGAGTGGTAAAACATTAATTGGTAGCAAGGTTGCCGCGTTATTATCTGCTAAATTTATTGATGGTGACGATCTTCATCCAGCCAAAAATATAGATAAAATGTCGCAGGGTATTCCATTATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGACAAAACAGAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGA", + "dna_sequence_length": 564, + "functions": [ + "D-gluconate kinase, thermosensitive" + ], + "id": "CDS_4184", + "location": [ + [ + "NC_000913", + 4494623, + "+", + 564 + ] + ], + "md5": "fca417a483ae123877c643b40937fa1b", + "parent_gene": "", + "protein_md5": "8bef7645bff59027078b8dcd71c3ac20", + "protein_translation": "MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013982" + ], + [ + "gene_synonym", + "ECK4262" + ], + [ + "gene_synonym", + "EcoGene:EG11436" + ], + [ + "gene_synonym", + "GI:90111716" + ], + [ + "gene_synonym", + "GeneID:948802" + ], + [ + "gene_synonym", + "JW5761" + ], + [ + "gene_synonym", + "NP_418690.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27250" + ], + [ + "gene_synonym", + "ahr" + ], + [ + "gene_synonym", + "b4269" + ], + [ + "gene_synonym", + "yjgB" + ] + ], + "dna_sequence": "ATGTCGATGATAAAAAGCTATGCCGCAAAAGAAGCGGGCGGCGAACTGGAAGTTTATGAGTACGATCCCGGTGAGCTGAGGCCACAAGATGTTGAAGTGCAGGTGGATTACTGCGGGATCTGCCATTCCGATCTGTCGATGATCGATAACGAATGGGGATTTTCACAATATCCGCTGGTTGCCGGGCATGAGGTGATTGGGCGCGTGGTGGCACTCGGGAGCGCCGCGCAGGATAAAGGTTTGCAGGTCGGTCAGCGTGTCGGGATTGGCTGGACGGCGCGTAGCTGTGGTCACTGCGACGCCTGTATTAGCGGTAATCAGATCAACTGCGAGCAAGGTGCGGTGCCGACGATTATGAATCGCGGTGGCTTTGCCGAGAAGTTGCGTGCGGACTGGCAATGGGTGATTCCACTGCCAGAAAATATTGATATCGAGTCCGCCGGGCCGCTGTTGTGCGGCGGTATCACGGTCTTTAAACCACTGTTGATGCACCATATCACTGCTACCAGCCGCGTTGGGGTAATTGGTATTGGCGGGCTGGGGCATATCGCTATAAAACTTCTGCACGCAATGGGATGCGAGGTGACAGCCTTTAGTTCTAATCCGGCGAAAGAGCAGGAAGTGCTGGCGATGGGTGCCGATAAAGTGGTGAATAGCCGCGATCCGCAGGCACTGAAAGCACTGGCGGGGCAGTTTGATCTCATTATCAACACCGTCAACGTCAGCCTCGACTGGCAGCCCTATTTTGAGGCGCTGACCTATGGCGGTAATTTCCATACGGTCGGTGCGGTTCTCACGCCGCTGTCTGTTCCGGCCTTTACGTTAATTGCGGGCGATCGCAGCGTCTCTGGTTCTGCTACCGGCACGCCTTATGAGCTGCGTAAGCTGATGCGTTTTGCCGCCCGCAGCAAGGTTGCGCCGACCACCGAACTGTTCCCGATGTCGAAAATTAACGACGCCATCCAGCATGTGCGCGACGGTAAGGCGCGTTACCGCGTGGTGTTGAAAGCCGATTTTTGA", + "dna_sequence_length": 1020, + "functions": [ + "broad specificity NADPH-dependent aldehyde reductase, Zn-containing" + ], + "id": "CDS_4185", + "location": [ + [ + "NC_000913", + 4496209, + "-", + 1020 + ] + ], + "md5": "a63e4f9d357a0519e835943d279b386f", + "parent_gene": "", + "protein_md5": "a5e34328e12e34256dd07428af49849e", + "protein_translation": "MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF", + "protein_translation_length": 339, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013992" + ], + [ + "gene_synonym", + "ECK4264" + ], + [ + "gene_synonym", + "EcoGene:EG12364" + ], + [ + "gene_synonym", + "GeneID:948782" + ], + [ + "gene_synonym", + "JW4227" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39347" + ], + [ + "gene_synonym", + "b4271" + ], + [ + "gene_synonym", + "int" + ], + [ + "gene_synonym", + "intB" + ], + [ + "gene_synonym", + "yjgC" + ] + ], + "dna_sequence": "ATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTGCTTGTCCATCCAAATGGTTCTAAGTACTGGCGTTTGCAGTACCGTTATGAGGGAAAGCAAAAAATGCTGGCACTTGGGGTTTATCCTGAAATCACACTAGCGGATGCCAGAGTACGTCGTGACGAGGCGCGTAAGCTGCTTGCGAATGGCGTCGATCCGGGAGACAAAAAGAAAAATGATAAGGTTGAACAGAGTAAAGCACGAACCTTTAAAGAAGTCGCGATTGAGTGGCATGGCACCAATAAAAAGTGGTCTGAAGATCACGCCCATCGTGTGCTAAAAAGTCTTGAAGATAATCTTTTTGCAGCGCTTGGTGAACGTAATATCGCTGAGTTAAAAACTCGAGATTTATTAGCACCTATTAAGGCCGTAGAAATGTCTGGACGTCTTGAAGTGGCCGCTCGTCTTCAGCAGCGCACTACAGCCATCATGCGCTATGCAGTGCAAAGTGGGTTAATTGATTATAACCCGGCACAAGAGATGGCTGGGGCGGTTGCTTCCTGTAATCGACAACATCGTCCCGCGCTTGAATTAAAGCGCATCCCTGAGTTGCTTACAAAAATAGATAGCTATACTGGTAGGCCGCTAACCCGATGGGCGATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATAGTGCGTTACGGGTCATGGGGTATGATACAAAAGTAGAGGTTTGTGGTCATGGCTTTCGAACAATGGCCTGTAGTTCATTGGTCGAATCAGGTCTGTGGTCTCGTGATGCTGTTGAACGTCAGATGAGCCACATGGCGCGAAATTCAGTGAGGGCCGCGTATATCCATAAAGCAGAGCATCTGGAAGAACGGCGATTGATGCTACAGTGGTGGGCCGATTTTCTGGATGTAAACAGAGAAAGGTTTATCAGTCCATTTGAATATGCAAAGATTAATAATCCATTAAAACAGTAA", + "dna_sequence_length": 1266, + "id": "CDS_4186", + "location": [ + [ + "NC_000913", + 4496675, + "+", + 1266 + ] + ], + "md5": "4d3d2c9cc5cc98bbfc67271210841daf", + "parent_gene": "", + "protein_md5": "edc6fefcb63948715dad8302a266d488", + "protein_translation": "MALTDIKVRAAKPTDKQY", + "protein_translation_length": 18, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013999" + ], + [ + "gene_synonym", + "ECK0357" + ], + [ + "gene_synonym", + "EcoGene:EG40003" + ], + [ + "gene_synonym", + "GI:145698344" + ], + [ + "gene_synonym", + "GeneID:948781" + ], + [ + "gene_synonym", + "NP_418692.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF45" + ], + [ + "gene_synonym", + "b4272" + ], + [ + "gene_synonym", + "insC1" + ] + ], + "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", + "dna_sequence_length": 366, + "functions": [ + "IS2 repressor TnpA" + ], + "id": "CDS_4187", + "location": [ + [ + "NC_000913", + 4498272, + "+", + 366 + ] + ], + "md5": "9ed51bec276857ffa1620cbb329c920f", + "parent_gene": "", + "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", + "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014001" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "EcoGene:EG40004" + ], + [ + "gene_synonym", + "GI:16132094" + ], + [ + "gene_synonym", + "GeneID:948779" + ], + [ + "gene_synonym", + "NP_418693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF58" + ], + [ + "gene_synonym", + "b4273" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", + "dna_sequence_length": 906, + "functions": [ + "IS2 transposase TnpB" + ], + "id": "CDS_4188", + "location": [ + [ + "NC_000913", + 4498595, + "+", + 906 + ] + ], + "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", + "parent_gene": "", + "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", + "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014007" + ], + [ + "gene_synonym", + "ASAP:ABE-0014009" + ], + [ + "gene_synonym", + "ASAP:ABE-0285081" + ], + [ + "gene_synonym", + "ASAP:ABE-0285108" + ], + [ + "gene_synonym", + "ECK4266" + ], + [ + "gene_synonym", + "EcoGene:EG12543" + ], + [ + "gene_synonym", + "GeneID:4056033" + ], + [ + "gene_synonym", + "JW4234" + ], + [ + "gene_synonym", + "JW5763" + ], + [ + "gene_synonym", + "JW5764" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39349" + ], + [ + "gene_synonym", + "b4274" + ], + [ + "gene_synonym", + "b4575" + ], + [ + "gene_synonym", + "yjgW" + ], + [ + "gene_synonym", + "yjgX" + ], + [ + "gene_synonym", + "yjgY" + ] + ], + "dna_sequence": "GTGAACCGCCCCGTGTTTCCTGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTATTCGTGGTGATTTTCTGGCGGACACACCATCGCGACCACCGTAACTGGCTGGCTCTACGGCTATTCGTATTATGCTCTGTAAACCGTTGGCCATTGCGGATGGTTAAAGGAACAGTTGTGGGGACAACTGACACATTACGTGAAATGCAGCGTTATGAACAACTGAGTAGCACGGGGCTGACAACTGGAAAATCCAGCCGGGGAGCACCGTTATATGATACGATTGTTATTGTCACTGGTGAGAGTGTGCGCAGGGATTATATGTCAGTGTATGACTATCCCGTACCAACCACACCGTGGCTGAATACGGCACCCGGTTTATTTATTGACGATTATACCTCGACAGCCTCCAGTACAGTGTCTTCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGATTCCGGCAACAATGTGGTGGCGCTGGCAGCAAAAGCAGGATACAGCACATGGTGGATATCCAATCAAGGAAAACTGGGGGAGCATGACACACGCATCTCTGTTATTGCTTCTGATGCGGAGCATGCCACTTTCCTCAAGAAAGGCAGCTTCGCTTCCCGTAAAACAGATGACAAACTGTTGTTACAGGAAACAGAACGTGCGCTGGCGGATACATCCTCTCCGAAGATAATTTTCCTGCACATGATGGGTTCTCATCCAAATCCGTGTGACAGCCTTAACTCCTAGCCGAATAATTACCTGGAGCAGTATCCCCGAAAAATTGCCTGTTACCTCGCCAGCATCAGTAAACTGGATAACTTTCTTGGCCAGCTTGATGGTATCCTTCGCCGGTACTCACGTCATTTCGCCATGCTTTACTTTTCTGGCCTTGGGCTGTCGGTCAGCGACAGTGCCAATCCTGTTCATCATTATGGTCATGTGCAGGGAGGCTACAGTGTGCCACTGATTATTACCGCCAGTGACATAACGTCTCATCAGCCCGTCAGTAGAAAAATCAGTGCCCGTCATTTCGCAGGTATTTTTCAGTGGATGACCGGTATTTGTACTGAAAATATACCGCCATTCAATCCGCTGACAGACGAAGATAACTAACCTGTTATGGTTTTTAAGGGAGAGAGGAATATACCGGCAGACAGTTTGAAACCTCAGCCACTTATTCTTCCTGATCACAGGTAA", + "dna_sequence_length": 1200, + "id": "CDS_4189", + "location": [ + [ + "NC_000913", + 4500791, + "-", + 258 + ], + [ + "NC_000913", + 4500534, + "-", + 942 + ] + ], + "md5": "e98e76fa8a068bc4b28577b9787330a8", + "parent_gene": "", + "protein_md5": "b1da764cdf6348eb69527abb9d085502", + "protein_translation": "VNRPVFPVYHFLVSAAILVFVVIFWRTHHRDHRNWLALRLFVLCSVNRWPLRMVKGTVVGTTDTLREMQRYEQLSSTGLTTGKSSRGAPLYDTIVIVTGESVRRDYMSVYDYPVPTTPWLNTAPGLFIDDYTSTASSTVSSLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHDTRISVIASDAEHATFLKKGSFASRKTDDKLLLQETERALADTSSPKIIFLHMMGSHPNPCDSLNS", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014018" + ], + [ + "gene_synonym", + "ECK4267" + ], + [ + "gene_synonym", + "EcoGene:EG12603" + ], + [ + "gene_synonym", + "GI:16132098" + ], + [ + "gene_synonym", + "GeneID:948804" + ], + [ + "gene_synonym", + "JW4236" + ], + [ + "gene_synonym", + "NP_418697.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39351" + ], + [ + "gene_synonym", + "b4277" + ], + [ + "gene_synonym", + "yjgZ" + ] + ], + "dna_sequence": "TTGTTACCTCCTGGACCGCTTCTTGTCCTTCCAGTCGGAGCGAGAGTTAGCCGGGGCGGACTTTCACCGACGGAAAGATCGTGCATTTCAAGGCACACACAACAATATCTGCGAGCGTGCTATCCGTCCGGTCGTTATGGGACGAAAGGCCTGGTTGTTCGCTGGTTCACTGGTGGCCGGGAACCGCGCGGCACAGATAATGAGCCTTCTGGGAACCGCAGTCTGGAGCCACATGCTTGGCTGACGGACGTCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAA", + "dna_sequence_length": 330, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4190", + "location": [ + [ + "NC_000913", + 4501260, + "+", + 330 + ] + ], + "md5": "7cc1d8dad54a027caae1b09ec9ef55e0", + "parent_gene": "", + "protein_md5": "7e684458f3fdf197432229d4dfbbdb59", + "protein_translation": "MLPPGPLLVLPVGARVSRGGLSPTERSCISRHTQQYLRACYPSGRYGTKGLVVRWFTGGREPRGTDNEPSGNRSLEPHAWLTDVLTRLPEWPEERLAELLPLEGFTFFG", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014021" + ], + [ + "gene_synonym", + "ECK4268" + ], + [ + "gene_synonym", + "EcoGene:EG40007" + ], + [ + "gene_synonym", + "GI:16132099" + ], + [ + "gene_synonym", + "GeneID:948805" + ], + [ + "gene_synonym", + "NP_418698.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03835" + ], + [ + "gene_synonym", + "b4278" + ], + [ + "gene_synonym", + "insG" + ] + ], + "dna_sequence": "ATGCACATTGGACAGGCTCTTGATCTGGTATCCCGTTACGATTCTCTGCGTAACCCACTGACTTCTCTGGGGGATTACCTCGACCCCGAACTCATCTCTCGTTGCCTTGCCGAATCAGGTACTGTAACGCTACGCAAGCGCCGTCTTCCCCTCGAAATGATGGTCTGGTGTATTGTTGGCATGGCGCTTGAGCGTAAAGAACCTCTTCACCAGATTGTGAATCGCCTGGACATCATGCTGCCGGGCAATCGCCCCTTCGTTGCCCCCAGTGCCGTTATTCAGGCCCGCCAGCGCCTGGGAAGTGAGGCTGTCCGCCGCGTGTTCACGAAAACAGCGCAGCTCTGGCATAACGCCACGCCGCATCCGCACTGGTGCGGCCTGACCCTGCTGGCCATCGATGGTGTGTTCTGGCGCACACCGGATACACCAGAGAACGATGCAGCCTTCCCCCGCCAGACACATGCCGGGAACCCGGCGCTCTACCCGCAGGTCAAAATGGTCTGCCAGATGGAACTGACCAGCCATCTGCTGACGGCTGCAGCCTTCGGCACGATGAAGAACAGCGAAAATGAGCTTGCTGAGCAACTTATAGAACAAACCGGCGATAACACTCTGACGTTAATGGATAAAGGTTATTACTCACTGGGACTGTTAAATGCCTGGAGCCTGGCGGGAGAACACCGCCACTGGATGATACCTCTCAGAAAGGGAGCGCAATATGAAGAGATCAGAAAACTGGGTAAAGGCGATCATCTGGTGAAGCTGAAAACCAGCCCGCAGGCACGAAAAAAGTGGCCGGGACTGGGAAATGAAGTGACTGCCCGCCTGCTGACCGTGACGCGCAAAGGAAAAGTCTGCCATCTGCTGACGTCGATGACGGACGCCATGCGCTTCCCCGGAGGAGAAATGGGGGATCTGTACAGTCATCGCTGGGAAATCGAACTGGGATACAGGGAGATAAAACAGACGATGCAACGGAGCAGGCTGACGCTGAGAAGTAAAAAGCCGGAGCTTGTGGAGCAAGAGCTGTGGGGTGTCTTACTGGCTTATAATCTGGTGAGATATCAGATGATTAAAATGGCGGAACATCTGAAAGGTTACTGGCCGAATCAACTGAGTTTCTCAGAATCATGCGGAATGGTGATGAGAATGCTGATGACATTGCAGGGCGCTTCACCGGGACGTATACCGGAGCTGATGCGCGATCTTGCAAGTATGGGACAACTTGTGAAATTACCGACAAGAAGGGAAAGGGCCTTCCCGAGAGTGGTAAAGGAGAGGCCCTGGAAATACCCCACAGCCCCGAAAAAGAGCCAGTCAGTTGCTTAA", + "dna_sequence_length": 1329, + "functions": [ + "IS4 transposase" + ], + "id": "CDS_4191", + "location": [ + [ + "NC_000913", + 4503431, + "-", + 1329 + ] + ], + "md5": "7b66166e33554309cb59cfc4f3349856", + "parent_gene": "", + "protein_md5": "d25df419c68619bab3e27ac9208e2212", + "protein_translation": "MHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQARQRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGYYSLGLLNAWSLAGEHRHWMIPLRKGAQYEEIRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMGDLYSHRWEIELGYREIKQTMQRSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRERAFPRVVKERPWKYPTAPKKSQSVA", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014025" + ], + [ + "gene_synonym", + "ECK4269" + ], + [ + "gene_synonym", + "EcoGene:EG12544" + ], + [ + "gene_synonym", + "GI:90111718" + ], + [ + "gene_synonym", + "GeneID:948807" + ], + [ + "gene_synonym", + "JW5768" + ], + [ + "gene_synonym", + "NP_418699.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39352" + ], + [ + "gene_synonym", + "b4279" + ], + [ + "gene_synonym", + "yjhB" + ] + ], + "dna_sequence": "ATGGCAACAGCATGGTATAAACAAGTTAATCCACCACAACGGAAAGCTCTTTTTTCCGCATGGCTTGGATATGTATTTGATGGCTTTGATTTTATGATGATATTTTACATTCTTCATATTATAAAAGCAGATCTTGGCATTACGGATATTCAGGCTACTTTAATAGGGACAGTGGCCTTCATAGCCAGACCTATTGGAGGTGGTTTTTTTGGTGCCATGGCTGATAAATATGGTCGTAAGCCAATGATGATGTGGGCAATTTTCATTTACTCAGTCGGAACAGGCCTTAGCGGTATTGCTACAAACTTATATATGCTCGCAGTTTGCCGTTTTATTGTTGGCTTAGGGATGTCTGGTGAATATGCATGTGCTTCAACTTATGCGGTAGAAAGTTGGCCTAAAAATCTTCAATCTAAAGCTAGTGCTTTTTTGGTAAGTGGTTTTTCTGTTGGAAATATTATTGCGGCACAAATAATCCCTCAGTTTGCTGAAGTATATGGATGGAGAAACTCTTTTTTTATAGGCCTGTTACCAGTTTTACTAGTTCTTTGGATCAGAAAAAGTGCTCCAGAAAGTCAGGAGTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATATTTTTTGGTTTTGTTGGTGATAAGATTGGTGTAAAAAAAGCCTTTGTAGTCGGTCTAATAACTTCATTTATTTTCCTTTGTCCTCTTTTTTTTATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGTATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCTTATTTATAACTTAGGGGCAACTGGAGGAATGGCCGCACCTGTATTAGCTACATACATTTCAGGATATTATGGCTTAGGTGTTTCATTATTCATTGTTACGGTTGCATTCTCTGCCTTATTAATTTTGTTAGTTGGTTTTGATATTCCAGGTAAAATTTATAAACTATCCGTGGCTAAATGA", + "dna_sequence_length": 1218, + "functions": [ + "putative MFS transporter, membrane protein" + ], + "id": "CDS_4192", + "location": [ + [ + "NC_000913", + 4504058, + "+", + 1218 + ] + ], + "md5": "b84a808e9427a85bd6971a4b2be146c3", + "parent_gene": "", + "protein_md5": "37fb756d6dbd803e9fea18f0e62f8c0b", + "protein_translation": "MATAWYKQVNPPQRKALFSAWLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAFIARPIGGGFFGAMADKYGRKPMMMWAIFIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGEYACASTYAVESWPKNLQSKASAFLVSGFSVGNIIAAQIIPQFAEVYGWRNSFFIGLLPVLLVLWIRKSAPESQEWIEDKYKDKSTFLSVFRKPHLSISMIVFLVCFCLFGANWPINGLLPSYLADNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDKIGVKKAFVVGLITSFIFLCPLFFISVKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPTKLRGLGTGLIYNLGATGGMAAPVLATYISGYYGLGVSLFIVTVAFSALLILLVGFDIPGKIYKLSVAK", + "protein_translation_length": 405, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014027" + ], + [ + "gene_synonym", + "ECK4270" + ], + [ + "gene_synonym", + "EcoGene:EG12545" + ], + [ + "gene_synonym", + "GI:90111719" + ], + [ + "gene_synonym", + "GeneID:948808" + ], + [ + "gene_synonym", + "JW5769" + ], + [ + "gene_synonym", + "NP_418700.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39353" + ], + [ + "gene_synonym", + "b4280" + ], + [ + "gene_synonym", + "yjhC" + ] + ], + "dna_sequence": "ATGATTAATTATGGCGTTGTTGGTGTTGGATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGTCTCAAGTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCGTGTAAAGAAGCTGGTGTGACCTTTATGGCCGGGCATATTATGAATTTTTTCAATGGGGTTCAATATGCACGGAAGTTAATTAAAGAAGGTGTTATCGGCGAAATATTATCATGTCATACTAAGAGAAATGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAGATGAAAGAACAATCTGGTGGACATCTATATCATCATATACATGAGTTAGATTGTGTTCAGCATTTACTTGGAGAAATACCAGAGACGGTTACTATGATTGGTGGAAATTTGGCCCATTCTGGTCCAGGATTTGGCAATGAAGATGATATGTTATTTATGACCTTGGAATTCCCGTCAGGAAAACTAGCAACCTTAGAGTGGGGGAGTGCATTTAACTGGCCGGAACATTATGTCATCATCAATGGAACTAAAGGCTCTATTAAAATTGATATGCAAGAAACAGCAGGGTCACTTAGGATTGGCGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAA", + "dna_sequence_length": 1119, + "functions": [ + "GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent" + ], + "id": "CDS_4193", + "location": [ + [ + "NC_000913", + 4505287, + "+", + 1119 + ] + ], + "md5": "162d51765d9d904ff57dd471301bfbbd", + "parent_gene": "", + "protein_md5": "eaeaa260571feb2e0c2e4cc1dc7f8004", + "protein_translation": "MINYGVVGVGYFGAELARFMNMHDNAKITCVYDPENGENIARELQCINMSSLDALVSSKLVDCVIVATPNYLHKEPVIKAAKNKKHVFCEKPIALSYEDCVDMVKACKEAGVTFMAGHIMNFFNGVQYARKLIKEGVIGEILSCHTKRNGWENKQERLSWKKMKEQSGGHLYHHIHELDCVQHLLGEIPETVTMIGGNLAHSGPGFGNEDDMLFMTLEFPSGKLATLEWGSAFNWPEHYVIINGTKGSIKIDMQETAGSLRIGGQTKHFLVHETQEEDDDRRKGNMTSEMDGAIAYGHPGKKTPLWLASLIRKETLFLHNILCGAKPEEDYIDLLNGEAAMSAIATADAATLSRSQDRKVKISEIIKHTSVM", + "protein_translation_length": 372, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4434" + ], + [ + "gene_synonym", + "EcoGene:EG14464" + ], + [ + "gene_synonym", + "GI:157783151" + ], + [ + "gene_synonym", + "GeneID:5625581" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A8DYQ1" + ], + [ + "gene_synonym", + "YP_001491548.1" + ], + [ + "gene_synonym", + "b4655" + ], + [ + "gene_synonym", + "ythA" + ] + ], + "dna_sequence": "ATGATCAAGAATTTTATCTTCGATAATCTCATAATTTTAGCAGTGCCATTTATGATAAAAACATCCCTTAAAACCAATCTAATCTTTTTCTTCCTCTGTGTATTTGTTCCCCATATGGCGTCATAA", + "dna_sequence_length": 126, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4194", + "location": [ + [ + "NC_000913", + 4506448, + "+", + 126 + ] + ], + "md5": "27a3170550e291304d0bcd020a26f319", + "parent_gene": "", + "protein_md5": "4463a714b293351829c5618fe3434b89", + "protein_translation": "MIKNFIFDNLIILAVPFMIKTSLKTNLIFFFLCVFVPHMAS", + "protein_translation_length": 41, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014029" + ], + [ + "gene_synonym", + "ECK4271" + ], + [ + "gene_synonym", + "EcoGene:EG12546" + ], + [ + "gene_synonym", + "GeneID:948809" + ], + [ + "gene_synonym", + "JW5770" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39354" + ], + [ + "gene_synonym", + "b4281" + ], + [ + "gene_synonym", + "yjhD" + ] + ], + "dna_sequence": "GTGAACTGTGAGACGAAACAGCGTACACAGTTTGAATGTATCTACTTTTCCCAATACTGGGCGAAGGGAGATTTTATTGCGAAGCGCGCGCCAATTGGTCAGTGGGAACCTTATTCGGAAGAGTCACTACTTGGCATCATCGTCACCAGCGTCTGTCGTATTAAAGTCGCGATGCTAAAACCTGAACCTCCCAGAGATCCCCATATCCCGCTGATGGGGGATTTTAACTAA", + "dna_sequence_length": 231, + "id": "CDS_4195", + "location": [ + [ + "NC_000913", + 4506856, + "-", + 231 + ] + ], + "md5": "478c43d1bf7d5a4ef6e3e17de61b8007", + "parent_gene": "", + "protein_md5": "d965bafb5fce30905543b7d9edad0ed4", + "protein_translation": "VNCETKQRTQFECIYFSQYWAKGDFIAKRAPIGQWEPYSEESLLGIIVTSVCRIKVAMLKPEPPRDPHIPLMGDFN", + "protein_translation_length": 76, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014033" + ], + [ + "gene_synonym", + "ECK4272" + ], + [ + "gene_synonym", + "EcoGene:EG12547" + ], + [ + "gene_synonym", + "GeneID:948810" + ], + [ + "gene_synonym", + "JW4242" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39355" + ], + [ + "gene_synonym", + "b4282" + ], + [ + "gene_synonym", + "yjhE" + ] + ], + "dna_sequence": "TTGCTGGCCGATGAGCTGACCATTGGGCCTATCCGGGCTGTCCCGATGGATATTACGCCGAAGTATGTGGGAATTGCCAGCGGATTGATGAACGCCGGTTCCGCTGTCGCCGACATTATTTCACCTATCGCCTTTGGCATTATTATCGACAAAACAGGCAACTGGAGTTTACCATTCTACGGTTCCGTCGCATTGCTTGTTATTGGTATATTCCTGACGTTCTTCATGCGTCCAGATAAGTCATTGTAA", + "dna_sequence_length": 249, + "id": "CDS_4196", + "location": [ + [ + "NC_000913", + 4506861, + "+", + 249 + ] + ], + "md5": "50f5592290f287e72f9a2c08b7037cda", + "parent_gene": "", + "protein_md5": "d4b6050387b99ad55c3e38771f2647b9", + "protein_translation": "LLADELTIGPIRAVPMDITPKYVGIASGLMNAGSAVADIISPIAFGIIIDKTGNWSLPFYGSVALLVIGIFLTFFMRPDKSL", + "protein_translation_length": 82, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014040" + ], + [ + "gene_synonym", + "ECK4476" + ], + [ + "gene_synonym", + "EcoGene:EG40121" + ], + [ + "gene_synonym", + "GeneID:5061531" + ], + [ + "gene_synonym", + "ORFAB" + ], + [ + "gene_synonym", + "b4623" + ], + [ + "gene_synonym", + "insN2" + ], + [ + "gene_synonym", + "insO" + ], + [ + "gene_synonym", + "yjhW" + ] + ], + "dna_sequence": "ATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCACGGTTCGGCCGGAGCAAGAAGCATCGCCACAATGGCAACCCGGAGAGGCTACCAGATGGGACGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCAAAGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGA", + "dna_sequence_length": 1041, + "id": "CDS_4197", + "location": [ + [ + "NC_000913", + 4507197, + "+", + 255 + ], + [ + "NC_000913", + 4509009, + "+", + 471 + ], + [ + "NC_000913", + 4509479, + "+", + 315 + ] + ], + "md5": "22cc2fb0ac1a305469b1f566a58d5c01", + "parent_gene": "", + "protein_md5": "d181e0657c6f8e1118d900dddd360700", + "protein_translation": "MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRKLRKKLQRIEMENEILKKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFQSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAEASFS", + "protein_translation_length": 346, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014045" + ], + [ + "gene_synonym", + "ECK0258" + ], + [ + "gene_synonym", + "EcoGene:EG40009" + ], + [ + "gene_synonym", + "GI:16132105" + ], + [ + "gene_synonym", + "GeneID:948815" + ], + [ + "gene_synonym", + "NP_418704.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF90" + ], + [ + "gene_synonym", + "b4284" + ], + [ + "gene_synonym", + "insI1" + ] + ], + "dna_sequence": "ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGCGGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATAGCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGTTGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGCTTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAAACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACAGCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTAGGGCATTGGGAGGGCGATTTAGTCTCAGGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", + "dna_sequence_length": 1152, + "functions": [ + "IS30 transposase" + ], + "id": "CDS_4198", + "location": [ + [ + "NC_000913", + 4508617, + "-", + 1152 + ] + ], + "md5": "ec0d30272e812b24142e8fb5ab3917b7", + "parent_gene": "", + "protein_md5": "29e5a3b611b13a57961d86c92192eefc", + "protein_translation": "MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285082" + ], + [ + "gene_synonym", + "ECK4273" + ], + [ + "gene_synonym", + "EcoGene:EG40013" + ], + [ + "gene_synonym", + "GeneID:1450310" + ], + [ + "gene_synonym", + "b4561" + ], + [ + "gene_synonym", + "insM" + ] + ], + "dna_sequence": "ATGAGCAGAAAAACCCAACGTTACTCTAAAAAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGATCAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTACTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAGCGAGATATATTAAAAAAAGCAACTGTA", + "dna_sequence_length": 267, + "id": "CDS_4199", + "location": [ + [ + "NC_000913", + 4508942, + "-", + 267 + ] + ], + "md5": "ab608632d891f6a3289594af25d01094", + "parent_gene": "", + "protein_md5": "e4f0eb22682fd8317aaf3a81f4e27bb6", + "protein_translation": "MSRKTQRYSKKFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATV", + "protein_translation_length": 89, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014055" + ], + [ + "gene_synonym", + "ECK4276" + ], + [ + "gene_synonym", + "EcoGene:EG14409" + ], + [ + "gene_synonym", + "GeneID:948818" + ], + [ + "gene_synonym", + "JW4246" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47719" + ], + [ + "gene_synonym", + "b4286" + ], + [ + "gene_synonym", + "yjhV" + ] + ], + "dna_sequence": "CTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACGATGACTCTGGTTAATGATACCGGCTTTGACCCCGTATTTTCCGGCTCTATCGCTGAATCATGGCGTCAGCAGCCGTGCACACCATCCTATTGTTGTGACTGGGAGGCTGCCACCATGCTTCGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAA", + "dna_sequence_length": 330, + "id": "CDS_4200", + "location": [ + [ + "NC_000913", + 4509804, + "+", + 330 + ] + ], + "md5": "63e07bdfc402709e1752a62cedcd9c48", + "parent_gene": "", + "protein_md5": "e7549e3adbbf73b8ae2d6b89b2191333", + "protein_translation": "LPEGSRGRLAVAVAGDHPAAVQVTMTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPLAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV", + "protein_translation_length": 109, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014057" + ], + [ + "gene_synonym", + "ECK4277" + ], + [ + "gene_synonym", + "EcoGene:EG10290" + ], + [ + "gene_synonym", + "GI:16132108" + ], + [ + "gene_synonym", + "GeneID:948819" + ], + [ + "gene_synonym", + "JW4247" + ], + [ + "gene_synonym", + "NP_418707.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15031" + ], + [ + "gene_synonym", + "b4287" + ], + [ + "gene_synonym", + "fecE" + ] + ], + "dna_sequence": "ATGACTTTACGAACTGAAAATCTGACGGTCAGTTACGGGACAGACAAGGTACTTAACGACGTTTCACTCTCACTGCCAACGGGGAAGATCACCGCCCTGATCGGTCCTAACGGTTGCGGGAAATCGACGCTGTTAAACTGTTTTTCGCGGCTTTTAATGCCGCAGTCTGGCACCGTATTTCTCGGCGATAATCCCATAAATATGCTCTCATCGCGCCAGTTGGCCCGCAGGCTTTCGCTGCTGCCTCAGCACCATTTAACGCCAGAGGGGATCACAGTCCAGGAGCTGGTTTCGTATGGTCGTAATCCCTGGCTGTCACTCTGGGGGCGTCTCTCCGCTGAAGACAATGCACGAGTTAATGTCGCCATGAACCAGACCCGGATCAATCATCTTGCCGTTCGTCGGTTAACCGAGCTTTCCGGCGGTCAGCGCCAGCGCGCATTTCTGGCAATGGTCCTGGCCCAGAATACGCCCGTTGTATTACTTGATGAGCCAACCACCTATCTTGATATCAATCACCAGGTGGACCTGATGCGGTTGATGGGCGAACTCCGGACTCAGGGGAAAACGGTGGTCGCTGTGCTGCACGACCTTAATCAGGCTAGCCGGTACTGCGATCAACTGGTGGTAATGGCAAACGGACATGTTATGGCGCAAGGCACACCAGAAGAGGTGATGACCCCAGGATTGCTGAGAACAGTATTCAGCGTGGAAGCGGAAATACACCCCGAGCCGGTATCTGGCAGGCCGATGTGCCTAATGAGGTAG", + "dna_sequence_length": 768, + "functions": [ + "ferric citrate ABC transporter ATPase" + ], + "id": "CDS_4201", + "location": [ + [ + "NC_000913", + 4511457, + "-", + 768 + ] + ], + "md5": "0ff134124bcd9bee54a767fe0e3b765b", + "parent_gene": "", + "protein_md5": "318502bac10cf48ee99b7b70eaf4d0c1", + "protein_translation": "MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTLLNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRNPWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVVLLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMAQGTPEEVMTPGLLRTVFSVEAEIHPEPVSGRPMCLMR", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014059" + ], + [ + "gene_synonym", + "ECK4278" + ], + [ + "gene_synonym", + "EcoGene:EG10289" + ], + [ + "gene_synonym", + "GI:16132109" + ], + [ + "gene_synonym", + "GeneID:946816" + ], + [ + "gene_synonym", + "JW4248" + ], + [ + "gene_synonym", + "NP_418708.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15029" + ], + [ + "gene_synonym", + "b4288" + ], + [ + "gene_synonym", + "fecD" + ] + ], + "dna_sequence": "ATGAAAATTGCGCTGGTTATTTTCATCACCCTTGCCCTGGCGGGCTGTGCGCTGTTATCACTCCATATGGGAGTGATCCCCGTGCCGTGGCGCGCGCTGCTGACCGACTGGCAGGCCGGACACGAGCATTATTATGTATTGATGGAGTACCGACTGCCGCGCTTGCTGCTGGCACTGTTTGTCGGTGCAGCCCTCGCCGTGGCGGGCGTGCTGATACAGGGGATTGTGCGCAACCCTCTGGCATCACCGGATATTCTCGGTGTTAACCATGCCGCCAGCCTGGCCTCTGTGGGGGCTCTACTTCTTATGCCGTCACTGCCCGTGATGGTGCTGCCGCTGCTGGCCTTTGCGGGCGGCATGGCGGGGTTGATATTGCTGAAGATGCTGGCAAAGACCCACCAGCCGATGAAGCTGGCGCTCACCGGCGTGGCGCTTTCTGCATGCTGGGCCAGCCTGACGGATTATCTGATGCTCTCGCGCCCGCAGGATGTGAACAACGCCCTGCTGTGGCTGACCGGCAGCTTATGGGGCCGTGACTGGAGCTTTGTGAAGATTGCCATCCCGCTGATGATTTTATTTCTGCCGCTGAGCCTGAGTTTTTGCCGCGATCTCGACCTCCTTGCACTCGGCGATGCGCGCGCCACCACGCTCGGTGTGTCGGTGCCCCATACCCGATTCTGGGCTTTGTTACTAGCTGTCGCCATGACATCTACCGGCGTGGCCGCCTGCGGCCCGATTAGCTTTATTGGTCTCGTGGTGCCGCATATGATGCGTAGCATCACCGGTGGACGTCACCGCAGACTGCTGCCTGTTTCGGCCCTGACAGGTGCGTTGCTGTTGGTGGTTGCCGATCTGCTGGCGAGAATTATTCATCCCCCACTGGAGCTCCCGGTTGGCGTGCTGACCGCCATTATCGGTGCGCCGTGGTTTGTCTGGTTGCTTGTGAGAATGCGATAA", + "dna_sequence_length": 957, + "functions": [ + "ferric citrate ABC transporter permease" + ], + "id": "CDS_4202", + "location": [ + [ + "NC_000913", + 4512414, + "-", + 957 + ] + ], + "md5": "b960a0c9fd074bcdf1ff9ce971c3e6c7", + "parent_gene": "", + "protein_md5": "5507989de477096b4b7777fad1d90143", + "protein_translation": "MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGHEHYYVLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPSLPVMVLPLLAFAGGMAGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSRPQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLGVSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGALLLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014063" + ], + [ + "gene_synonym", + "ECK4279" + ], + [ + "gene_synonym", + "EcoGene:EG10288" + ], + [ + "gene_synonym", + "GI:16132110" + ], + [ + "gene_synonym", + "GeneID:948826" + ], + [ + "gene_synonym", + "JW4249" + ], + [ + "gene_synonym", + "NP_418709.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15030" + ], + [ + "gene_synonym", + "b4289" + ], + [ + "gene_synonym", + "fecC" + ] + ], + "dna_sequence": "ATGACCGCGATAAAACACCCGGTGCTGCTGTGGGGGCTTCCCGTTGCAGCACTTATTATTATTTTCTGGCTGAGTCTGTTTTGCTACTCGGCCATTCCTGTTTCCGGAGCAGATGCAACCCGCGCCCTGCTGCCTGGACACACGCCAACGCTACCAGAAGCGCTGGTGCAAAACCTTCGTTTGCCACGAAGCCTGGTCGCCGTTCTGATCGGCGCAAGCCTGGCGCTCGCGGGCACGCTGCTGCAAACCCTGACCCACAACCCAATGGCCTCTCCTTCACTGCTCGGCATTAACAGCGGCGCGGCGCTGGCTATGGCGCTTACCAGCGCGCTGAGTCCGACGCCGATTGCAGGCTATTCTCTGTCATTCATCGCGGCATGCGGGGGCGGCGTGAGCTGGCTGCTGGTCATGACCGCAGGAGGCGGATTTCGTCATACCCATGACAGAAACAAACTGATCCTCGCGGGTATCGCGCTGTCGGCCTTTTGTATGGGCCTTACCCGCATCACCCTGCTGCTGGCCGAAGATCATGCTTACGGCATCTTTTACTGGCTGGCAGGCGGAGTGTCCCACGCCCGCTGGCAGGATGTCTGGCAGCTCTTGCCGGTGGTGGTCACTGCAGTCCCTGTCGTGTTGCTGCTGGCGAATCAACTGAACCTGCTCAACCTCAGCGACAGCACCGCCCATACGCTGGGAGTGAACCTGACGAGGCTACGTTTGGTCATCAATATGTTAGTGCTGCTTCTGGTTGGTGCGTGCGTCAGCGTAGCAGGTCCGGTGGCGTTTATCGGTCTGCTGGTGCCACATCTGGCGCGCTTCTGGGCAGGCTTCGATCAGCGCAACGTACTGCCAGTGAGCATGCTGCTGGGGGCCACGCTGATGCTGCTGGCAGATGTACTCGCACGCGCGCTGGCCTTCCCCGGAGATCTGCCCGCAGGCGCAGTGCTGGCGCTGATTGGCAGCCCTTGCTTTGTCTGGCTTGTGAGGAGGCGAGGATGA", + "dna_sequence_length": 999, + "functions": [ + "ferric citrate ABC transporter permease" + ], + "id": "CDS_4203", + "location": [ + [ + "NC_000913", + 4513409, + "-", + 999 + ] + ], + "md5": "97dc3c1dd7555cdc9899092ad37c0ee4", + "parent_gene": "", + "protein_md5": "1db6169a836afa2000754b7e24465c9f", + "protein_translation": "MTAIKHPVLLWGLPVAALIIIFWLSLFCYSAIPVSGADATRALLPGHTPTLPEALVQNLRLPRSLVAVLIGASLALAGTLLQTLTHNPMASPSLLGINSGAALAMALTSALSPTPIAGYSLSFIAACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALSAFCMGLTRITLLLAEDHAYGIFYWLAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQLNLLNLSDSTAHTLGVNLTRLRLVINMLVLLLVGACVSVAGPVAFIGLLVPHLARFWAGFDQRNVLPVSMLLGATLMLLADVLARALAFPGDLPAGAVLALIGSPCFVWLVRRRG", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014065" + ], + [ + "gene_synonym", + "ECK4280" + ], + [ + "gene_synonym", + "EcoGene:EG10287" + ], + [ + "gene_synonym", + "GI:162135917" + ], + [ + "gene_synonym", + "GeneID:946838" + ], + [ + "gene_synonym", + "JW4250" + ], + [ + "gene_synonym", + "NP_418710.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15028" + ], + [ + "gene_synonym", + "b4290" + ], + [ + "gene_synonym", + "fecB" + ] + ], + "dna_sequence": "ATGTTGGCATTTATCCGTTTTCTTTTTGCAGGCCTGCTGCTGGTGATCAGCCACGCCTTTGCCGCCACGGTTCAGGACGAACACGGCACGTTTACACTCGAAAAAACGCCACAACGGATTGTGGTGCTGGAACTCTCGTTCGCCGATGCGCTGGCCGCCGTGGACGTCATCCCGATCGGTATTGCCGACGATAACGATGCAAAACGCATCCTGCCCGAAGTGCGTGCGCACCTGAAACCGTGGCAGTCCGTCGGAACGCGCGCGCAGCCGAGCCTGGAAGCCATTGCCGCTCTGAAACCAGACCTGATCATTGCCGACAGCAGTCGCCATGCGGGGGTTTACATCGCCTTGCAGCAAATCGCGCCGGTACTGCTGCTTAAGTCCCGCAACGAAACCTACGCTGAAAATTTGCAATCTGCGGCTATCATCGGCGAAATGGTGGGTAAAAAGCGAGAGATGCAGGCACGTCTGGAACAACATAAAGAGAGGATGGCGCAGTGGGCCAGCCAGCTTCCCAAAGGGACACGCGTGGCCTTTGGCACATCACGCGAACAGCAATTCAACCTGCATACTCAGGAGACCTGGACCGGCAGCGTGCTGGCCTCTCTGGGGCTGAACGTTCCCGCTGCGATGGCGGGTGCGTCCATGCCGTCCATCGGCCTGGAGCAACTGCTGGCGGTCAATCCTGCCTGGCTGCTGGTTGCCCACTATCGCGAAGAGAGCATTGTTAAACGCTGGCAACAAGATCCGCTCTGGCAGATGTTAACCGCCGCGCAGAAGCAGCAGGTTGCTTCGGTCGACAGTAACACCTGGGCGCGGATGCGCGGTATTTTTGCTGCAGAGCGTATTGCCGCTGACACGGTAAAAATCTTCCACCATCAGCCGCTTACCGTTGTGAAATGA", + "dna_sequence_length": 903, + "functions": [ + "ferric citrate ABC transporter periplasmic binding protein" + ], + "id": "CDS_4204", + "location": [ + [ + "NC_000913", + 4514308, + "-", + 903 + ] + ], + "md5": "5fcd8de5185d9f4d0fd1466bbb2cdf11", + "parent_gene": "", + "protein_md5": "c4ae3479ad18eee121eb99383b10962d", + "protein_translation": "MLAFIRFLFAGLLLVISHAFAATVQDEHGTFTLEKTPQRIVVLELSFADALAAVDVIPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDLIIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQHKERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMAGASMPSIGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRGIFAAERIAADTVKIFHHQPLTVVK", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014067" + ], + [ + "gene_synonym", + "ECK4281" + ], + [ + "gene_synonym", + "EcoGene:EG10286" + ], + [ + "gene_synonym", + "GI:16132112" + ], + [ + "gene_synonym", + "GeneID:946427" + ], + [ + "gene_synonym", + "JW4251" + ], + [ + "gene_synonym", + "NP_418711.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13036" + ], + [ + "gene_synonym", + "b4291" + ], + [ + "gene_synonym", + "fecA" + ] + ], + "dna_sequence": "ATGACGCCGTTACGCGTTTTTCGTAAAACAACACCTTTGGTTAACACCATTCGCCTGAGCCTGCTGCCGCTGGCCGGTCTCTCGTTTTCCGCTTTTGCTGCACAGGTTAATATCGCACCGGGATCGCTCGATAAAGCGCTCAATCAGTATGCCGCACACAGCGGATTTACCCTCTCGGTTGACGCCAGCCTGACGCGCGGCAAGCAGAGCAACGGCCTGCACGGCGATTACGACGTCGAGAGCGGCCTGCAACAACTGCTGGACGGCAGCGGACTGCAGGTAAAACCGCTGGGAAATAACAGCTGGACGCTGGAGCCCGCGCCCGCACCAAAAGAAGATGCCCTGACCGTGGTCGGCGACTGGCTGGGTGATGCGCGTGAAAACGACGTATTTGAACATGCTGGCGCGCGTGACGTGATCCGCCGTGAGGATTTCGCCAAAACCGGCGCAACCACCATGCGTGAGGTACTTAACCGCATCCCTGGCGTCAGCGCGCCGGAAAACAACGGCACCGGCAGCCACGACCTGGCGATGAACTTTGGCATCCGGGGCCTGAACCCGCGCCTCGCCAGCCGCTCGACCGTCCTGATGGACGGCATCCCCGTCCCCTTCGCCCCTTACGGTCAGCCGCAGCTTTCACTGGCTCCCGTTTCGCTCGGCAACATGGATGCCATTGACGTGGTACGCGGTGGTGGTGCGGTGCGTTACGGACCGCAGAGCGTGGGCGGCGTGGTGAACTTTGTTACCCGTGCCATTCCGCAGGACTTTGGTATCGAGGCGGGCGTGGAAGGTCAGCTCAGCCCAACCTCTTCACAAAACAACCCGAAAGAGACGCACAACCTGATGGTGGGCGGCACAGCGGACAACGGTTTTGGCACCGCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTGCACACCTTCAACAGCCTGCTGCAATATTACGACGGTGAAGCCGACATGCCCGGTGGCCTGTCTCGCGCGGATTACGACGCCGATCGCTGGCAATCCACCCGCCCGTATGACCGCTTCTGGGGTCGTCGCAAGCTGGCGAGCCTGGGCTACCAGTTCCAGCCAGACAGCCAGCATAAATTCAACATTCAGGGGTTCTACACCCAAACCCTGCGCAGCGGCTACCTGGAGCAAGGCAAACGCATCACCCTCTCGCCGCGTAACTACTGGGTGCGCGGTATTGAGCCACGCTACAGCCAGATCTTTATGATCGGCCCTTCCGCGCACGAAGTGGGCGTGGGCTATCGCTATTTGAATGAATCAACGCATGAAATGCGTTACTACACCGCCACCAGCAGCGGGCAGTTGCCGTCCGGCTCAAGCCCTTACGACCGCGATACGCGTTCCGGCACCGAGGCGCACGCCTGGTATCTGGATGACAAAATCGACATCGGCAACTGGACCATCACGCCGGGTATGCGTTTCGAACATATCGAGTCATACCAGAACAACGCCATCACAGGCACGCACGAAGAAGTGAGCTATAACGCACCGCTTCCGGCGTTGAACGTGCTCTATCACCTGACTGACAGCTGGAATCTTTATGCAAACACTGAAGGCTCGTTCGGCACCGTACAGTACAGCCAGATTGGCAAGGCTGTGCAAAGCGGCAATGTTGAACCGGAAAAAGCGCGAACCTGGGAACTCGGTACCCGCTACGACGACGGCGCGCTGACGGCGGAAATGGGGCTGTTCCTGATTAACTTTAACAATCAGTACGACTCCAACCAGACCAACGACACCGTCACTGCACGTGGCAAAACGCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTTCCATCTACGCCAGCTATGCGTATGTGAACGCGGAAATCCGCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGAAAGAGAGCGCCGACGGCAGTACCGGCCGCATTCCCGGCTTCATGCTCTGGGGCGCACGCGTGGCGTATGACTTTGGCCCGCAGATGGCAGATCTGAACCTGGCATTCGGTGTGAAAAACATCTTCGACCAGGACTACTTCATCCGCTCTTATGACGACAACAACAAAGGCATCTATGCAGGCCAGCCGCGCACGCTGTATATGCAGGGGTCGTTGAAGTTCTGA", + "dna_sequence_length": 2325, + "functions": [ + "TonB-dependent outer membrane ferric citrate transporter and signal transducer", + "ferric citrate extracelluar receptor", + "FecR-interacting protein" + ], + "id": "CDS_4205", + "location": [ + [ + "NC_000913", + 4516677, + "-", + 2325 + ] + ], + "md5": "30afd5b5d123366322c27c5904a9afb4", + "parent_gene": "", + "protein_md5": "502a91e51e5cb0e64c72580d2cfb3dd6", + "protein_translation": "MTPLRVFRKTTPLVNTIRLSLLPLAGLSFSAFAAQVNIAPGSLDKALNQYAAHSGFTLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSWTLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRIPGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVSLGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPKETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLLQYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNIQGFYTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNESTHEMRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQNNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKNIFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF", + "protein_translation_length": 774, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014070" + ], + [ + "gene_synonym", + "ECK4282" + ], + [ + "gene_synonym", + "EcoGene:EG10292" + ], + [ + "gene_synonym", + "GI:16132113" + ], + [ + "gene_synonym", + "GeneID:949104" + ], + [ + "gene_synonym", + "JW4252" + ], + [ + "gene_synonym", + "NP_418712.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23485" + ], + [ + "gene_synonym", + "b4292" + ], + [ + "gene_synonym", + "fecR" + ] + ], + "dna_sequence": "ATGAATCCTTTGTTAACCGATTCCCGCCGTCAGGCGCTGCGTTCAGCTTCCCACTGGTATGCCGTGCTAAGCGGCGAGCGCGTCAGCCCACAACAGGAAGCGCGCTGGCAACAGTGGTATGAACAGGATCAGGATAACCAGTGGGCCTGGCAGCAGGTTGAAAACCTGCGCAACCAGCTTGGCGGTGTGCCTGGCGACGTTGCCAGCCGGGCGTTGCACGATACCCGCCTCACCCGCCGTCACGTGATGAAAGGATTACTGCTGTTGCTCGGCGCTGGCGGAGGCTGGCAGCTCTGGCAGTCGGAAACCGGCGAAGGTCTGCGGGCAGATTACCGCACCGCCAAAGGCACAGTCAGCCGTCAGCAACTGGAAGATGGCTCCCTGCTCACGCTGAATACCCAAAGCGCGGCGGATGTGCGTTTTGATGCGCATCAGCGCACCGTCCGGCTCTGGTACGGTGAAATCGCCATTACTACCGCGAAAGATGCCCTGCAACGCCCCTTCCGTGTCCTGACCCGTCAGGGCCAGCTCACTGCTTTAGGGACAGAATTTACCGTCCGCCAGCAGGATAATTTCACGCAGCTTGACGTGCAGCAGCACGCTGTGGAAGTGCTTCTCGCCAGTGCCCCCGCGCAAAAACGCATCGTGAACGCTGGTGAAAGCCTGCAGTTCAGCGCCTCTGAGTTTGGCGCAGTGAAACCGCTGGATGACGAGAGTACAAGCTGGACGAAGGACATCCTGAGCTTCAGCGATAAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACATTTCACCACTGTAA", + "dna_sequence_length": 954, + "functions": [ + "anti-sigma transmembrane signal transducer for ferric citrate transport", + "periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator" + ], + "id": "CDS_4206", + "location": [ + [ + "NC_000913", + 4517717, + "-", + 954 + ] + ], + "md5": "69c305892ce742a9487e370b75a45425", + "parent_gene": "", + "protein_md5": "11bfa25c2ddcd65cb4263b1eab1be190", + "protein_translation": "MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014072" + ], + [ + "gene_synonym", + "ECK4283" + ], + [ + "gene_synonym", + "EcoGene:EG10291" + ], + [ + "gene_synonym", + "GI:16132114" + ], + [ + "gene_synonym", + "GeneID:946839" + ], + [ + "gene_synonym", + "JW4253" + ], + [ + "gene_synonym", + "NP_418713.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23484" + ], + [ + "gene_synonym", + "b4293" + ], + [ + "gene_synonym", + "fecI" + ] + ], + "dna_sequence": "ATGTCTGACCGCGCCACTACCACAGCTTCCTTAACGTTCGAGTCGCTTTATGGCACACATCACGGCTGGTTGAAAAGCTGGCTGACGCGCAAACTCCAGTCTGCTTTTGATGCAGATGACATTGCCCAGGACACTTTTTTGCGGGTAATGGTCAGCGAAACGCTCTCGACGATCCGCGATCCTCGCTCCTTCCTCTGCACTATCGCCAAACGCGTGATGGTGGACCTGTTTCGCCGAAACGCGCTGGAAAAAGCGTATCTGGAGATGCTGGCGCTTATGCCGGAGGGGGGAGCGCCTTCACCTGAGGAACGCGAAAGCCAACTCGAGACCCTACAACTCCTCGACAGCATGCTGGACGGGCTAAACGGCAAAACACGTGAAGCGTTTCTGCTTTCGCAACTGGATGGTCTGACATACAGCGAGATTGCGCACAAACTCGGTGTTTCCATCAGCTCCGTGAAAAAATACGTGGCGAAAGCCGTCGAGCACTGCCTGCTGTTCCGTCTGGAGTATGGGTTATGA", + "dna_sequence_length": 522, + "functions": [ + "RNA polymerase sigma-19 factor, fec operon-specific", + "ECF sigma factor" + ], + "id": "CDS_4207", + "location": [ + [ + "NC_000913", + 4518235, + "-", + 522 + ] + ], + "md5": "bced95741ab3705f3187189e54426652", + "parent_gene": "", + "protein_md5": "950bf3a1043701a72038bd6628bf2e3a", + "protein_translation": "MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014077" + ], + [ + "gene_synonym", + "ECK4562" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16132115" + ], + [ + "gene_synonym", + "GeneID:948830" + ], + [ + "gene_synonym", + "NP_418714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF12" + ], + [ + "gene_synonym", + "b4294" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": "GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTAAGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_4208", + "location": [ + [ + "NC_000913", + 4518527, + "+", + 276 + ] + ], + "md5": "f5af3585650baef18ef489643e546acb", + "parent_gene": "", + "protein_md5": "6ba2017697fea8233c5451e6b898f588", + "protein_translation": "MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSPCRKTWQLQFTYTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285109" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GeneID:4056034" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF29" + ], + [ + "gene_synonym", + "b4576" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA", + "dna_sequence_length": 504, + "id": "CDS_4209", + "location": [ + [ + "NC_000913", + 4518721, + "+", + 504 + ] + ], + "md5": "a04d791e206d163133192e809639bc24", + "parent_gene": "", + "protein_md5": "916595ab6f36a6d064f6063074541481", + "protein_translation": "MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVV", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014079" + ], + [ + "gene_synonym", + "ECK4284" + ], + [ + "gene_synonym", + "EcoGene:EG12604" + ], + [ + "gene_synonym", + "GI:90111724" + ], + [ + "gene_synonym", + "GeneID:948827" + ], + [ + "gene_synonym", + "JW5952" + ], + [ + "gene_synonym", + "NP_418715.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39356" + ], + [ + "gene_synonym", + "b4295" + ], + [ + "gene_synonym", + "yjhU" + ] + ], + "dna_sequence": "GTGGATAGAGATCAAACAAACAGCAGCCTGTTCAATGATGATCCCGTACTTCATGCAACATGGCTGTACTATCAGGAAGGCAAAAGCCAGACTGAAGTTGCAGCTATCATGGGGGTGTCCCGCGTCACGGTTGTCAAATACCTGCAAACAGCCCGGGAAAATGGACTGGTTCATATCAACCTGGATGTGAATGTCTTTGGCTCTATCGACGCTGCTTTGCAAATTCGCGATAAATTCAATCTCCAGAGAGTGATCATCGTGCCGGATGGCGAACATGCCGGAAAACGTGATGATACAAAGCTGATGCGGACTCGCCTTTCACGTGCCGGTGGCATGTATCTGAATCAGGTGATTGAGAATGGTGATGTGCTGGGGGTTGCCTGGGGAAGAACAATCCATCAGATGAGCAAAACCATGACGCCGAAGTCATGTAAAAATGTCACCGTTATACAGATGCTCGGTTCCATGCCATCTCAGCCAGACCTGACGATCATTGAATCCTCATCGCAAATCGCCTACAAGCTTTCAGGCCGTGTCGCCTCGCTGCACGTGCCCGCCGTGGTATCAAGCGCCAGACTGGCCATGGAGTTACAGGCAGAGCCTATTATTCGATCGAATTTTGACGTTCTGACTCGCTGTACGAAAGCCTTTTTTGTCGTGGGTAACGCGCTTGATGAAAATCCCCTGATTCGGGTGGGCGTGCTGAATAAGAAGGAAATGCAGACGTATCGGGATTTAGGCGCAGTAGGTGTCATTTGTGGTCGCTTCTATGACAAGGAAGGGATGCCCGTCGTGGCTGATGTTGACCAGCGTATTCTGGGAATCAGTCTGGCTCAGCTAAGGCAGATTGAACGGAAGATCTTCCTTGCTGGTGGGGAAAGAGGCTATGACGCAACGTTGGGTGCCCTGCTGGGAGGATATGTCACGGACCTGATTGTTGATGAAGGAACGGCAGAGTTTTTGCTGGCGTGTGAATTACCACACTAA", + "dna_sequence_length": 987, + "functions": [ + "putative DNA-binding transcriptional regulator", + "KpLE2 phage-like element" + ], + "id": "CDS_4210", + "location": [ + [ + "NC_000913", + 4520324, + "-", + 987 + ] + ], + "md5": "3dac60ca891f833268459dd89e1e1b61", + "parent_gene": "", + "protein_md5": "6c1b608ebee893fcf621d63906ff068a", + "protein_translation": "MDRDQTNSSLFNDDPVLHATWLYYQEGKSQTEVAAIMGVSRVTVVKYLQTARENGLVHINLDVNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGMYLNQVIENGDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSMPSQPDLTIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVGNALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATLGALLGGYVTDLIVDEGTAEFLLACELPH", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014084" + ], + [ + "gene_synonym", + "ECK4285" + ], + [ + "gene_synonym", + "EcoGene:EG12548" + ], + [ + "gene_synonym", + "GI:16132117" + ], + [ + "gene_synonym", + "GeneID:949102" + ], + [ + "gene_synonym", + "JW4258" + ], + [ + "gene_synonym", + "NP_418716.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39357" + ], + [ + "gene_synonym", + "b4296" + ], + [ + "gene_synonym", + "yjhF" + ] + ], + "dna_sequence": "ATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATGGATTTGAGTAAAGTCGTCACCTCAGTCGAATCCGGACTTGGCGGTACGCTGGGCCATATTGGTTTGATATTTGGCTTCGGTGTTATGCTCGGTCGCTTGCTGGCCGATGCGGGTGGTGCGCAGCGAATAGCGCTGACCATGCTGAATTATTTCGGGAAAAATAAACTTGACTGGGCAGTGGTCTGTTCGGCGTTTATTGTCGGTATCGCACTTTTTTTCGAAGTCGGTTTAATTCTTCTGGTACCTATTTTATTCGCTATTGCCCGTGAAGCAAAAATATCACCGATGTTTATGTGTGTGCCGATGCTTTCTGGTTTGCTGGTCGCACACGGTTTTTTGCCGCCGCACCCCGGCCCGACTGTTATCGCCAGGGAATATGGCGCTGATGTAGGATTGGTACTGATATACGGTATCATTGTCGGCATTCCAACCTTTATTCTTTGCGGCCCGGTATTGAATAAATTCTGCCAGCGCATTATTCCGGACGCCTTTAAAAAAGAGGGGAATATAGCCTCTCTCGGCGCGACCCGCCGATTCAGCGAAAGCGAAATGCCAGGCTTTGGGATCAGTTTTCTCACGGCAATGCTGCCGGTGATCCTGATGGCGGTTGTCACCATCATCCAGATGACTCATGCCAAAAGTGCCGCGGATTCAGGCTTATTTTACAACGTGATACTGTTCTTAGGTAATTCAACGATCGCCATGCTGATTTCACTGCTATTCGCGATCTATACCATGGGCCTGGGGCGCGGGAAAACAATCCCTGACCTGATGGATTCTTGCGGAAAAGCTATCGCGGGTATTGCCGGTCTGCTGCTGATTATCGGTGGTGGTGGTGCATTCAAGCAAGTTCTCATCGACTCTGGCGTTGGTCAGTATATTTCCACCCTGGTTTCGGGTATGGATATTAACCCGATCCTGATGGCCTGGGGCGTGGCCGCATTCCTGCGTATTTGTCTGGGTTCAGCCACCGTCGCGGCGATCTCTACCGCCGGTCTGGTCATCCCATTGTTGGCAGTACATCCCAATACCAACCTGGCCTTGATTACGCTGGCTACCGGTGCCGGATCCTGTATTTGTTCTCACGTTAACGATGCCAGTTTCTGGATGATTAAAGACTTTTTTGGCCTGACCACCAAAGAAACGCTGTTATCCTGGACGCTGATGTCCACACTCTTATCCATCAGTGGGCTGATTTTTATTCTGCTCGCCAGCTTAGTTTTATAA", + "dna_sequence_length": 1350, + "functions": [ + "putative transporter" + ], + "id": "CDS_4211", + "location": [ + [ + "NC_000913", + 4522020, + "-", + 1350 + ] + ], + "md5": "655782b3a8e984caf4a96c8323871f1a", + "parent_gene": "", + "protein_md5": "a8e33b8d22b84fa15a5d6ee62092687c", + "protein_translation": "MPLIIVVAGIALLLLLTIKIKLNTFVSLIIVSIAVAIASGMDLSKVVTSVESGLGGTLGHIGLIFGFGVMLGRLLADAGGAQRIALTMLNYFGKNKLDWAVVCSAFIVGIALFFEVGLILLVPILFAIAREAKISPMFMCVPMLSGLLVAHGFLPPHPGPTVIAREYGADVGLVLIYGIIVGIPTFILCGPVLNKFCQRIIPDAFKKEGNIASLGATRRFSESEMPGFGISFLTAMLPVILMAVVTIIQMTHAKSAADSGLFYNVILFLGNSTIAMLISLLFAIYTMGLGRGKTIPDLMDSCGKAIAGIAGLLLIIGGGGAFKQVLIDSGVGQYISTLVSGMDINPILMAWGVAAFLRICLGSATVAAISTAGLVIPLLAVHPNTNLALITLATGAGSCICSHVNDASFWMIKDFFGLTTKETLLSWTLMSTLLSISGLIFILLASLVL", + "protein_translation_length": 449, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014087" + ], + [ + "gene_synonym", + "ECK4286" + ], + [ + "gene_synonym", + "EcoGene:EG12549" + ], + [ + "gene_synonym", + "GI:16132118" + ], + [ + "gene_synonym", + "GeneID:946829" + ], + [ + "gene_synonym", + "JW4259" + ], + [ + "gene_synonym", + "NP_418717.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39358" + ], + [ + "gene_synonym", + "b4297" + ], + [ + "gene_synonym", + "yjhG" + ] + ], + "dna_sequence": "ATGTCTGTTCGCAATATTTTTGCTGACGAGAGCCACGATATTTACACCGTCAGAACGCACGCCGATGGCCCGGACGGCGAACTCCCATTAACCGCAGAGATGCTTATCAACCGCCCGAGCGGGGATCTGTTCGGTATGACCATGAATGCCGGAATGGGTTGGTCTCCGGACGAGCTGGATCGGGACGGTATTTTACTGCTCAGTACACTCGGTGGCTTACGCGGCGCAGACGGTAAACCCGTGGCGCTGGCGTTGCACCAGGGGCATTACGAACTGGACATCCAGATGAAAGCGGCGGCCGAGGTTATTAAAGCCAACCATGCCCTGCCCTATGCCGTGTACGTCTCCGATCCTTGTGACGGGCGTACTCAGGGTACAACGGGGATGTTTGATTCGCTACCATACCGAAATGACGCATCGATGGTAATGCGCCGCCTTATTCGCTCTCTGCCCGACGCGAAAGCAGTTATTGGTGTGGCGAGTTGCGATAAGGGGCTTCCGGCCACCATGATGGCACTCGCCGCGCAGCACAACATCGCAACCGTGCTGGTCCCCGGCGGCGCGACGCTGCCCGCAAAGGATGGAGAAGACAACGGCAAGGTGCAAACCATTGGCGCACGCTTCGCCAATGGCGAATTATCTCTACAGGACGCACGCCGTGCGGGCTGTAAAGCCTGTGCCTCTTCCGGCGGCGGCTGTCAATTTTTGGGCACTGCCGGGACATCTCAGGTGGTGGCCGAAGGATTGGGACTGGCAATCCCACATTCAGCCCTGGCCCCTTCCGGTGAGCCTGTGTGGCGGGAGATCGCCAGAGCTTCCGCGCGAGCTGCGCTGAACCTGAGTCAAAAAGGCATCACCACCCGGGAAATTCTCACCGATAAAGCGATAGAGAATGCGATGACGGTCCATGCCGCGTTCGGTGGTTCAACAAACCTGCTGTTACACATCCCGGCAATTGCTCACCAGGCAGGTTGCCATATCCCGACCGTTGATGACTGGATCCGCATCAACAAGCGCGTGCCCCGACTGGTGAGCGTACTGCCTAATGGCCCGGTTTATCATCCAACGGTCAATGCCTTTATGGCAGGTGGTGTGCCGGAAGTCATGTTGCATCTGCGCAGCCTCGGATTGTTGCATGAAGACGTTATGACGGTTACCGGCAGCACGCTGAAAGAAAACCTCGACTGGTGGGAGCACTCCGAACGGCGTCAGCGGTTCAAGCAACTCCTGCTCGATCAGGAACAAATCAACGCTGACGAAGTGATCATGTCTCCGCAGCAAGCAAAAGCGCGCGGATTAACCTCAACTATCACCTTCCCGGTGGGCAATATTGCGCCAGAAGGTTCGGTGATCAAATCCACCGCCATTGACCCCTCGATGATTGATGAGCAAGGTATCTATTACCATAAAGGTGTGGCGAAGGTTTATCTGTCCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACAATTACCTTCACAGGAGGAGGCAACTGCAATATTAAATGCCAGACCCAGCCATCAGGATTTACTTCCCGATCCTGAATTGCCAGATGATACCCGGCTATGGGCAATGCTTCAGGCCGTGAGTGGTGGGACATGGACCGGTTGTATTTATGATGTAAACAAAATTGGCGCGGCTTTGCGCGATTTTATGAATAAAAACTGA", + "dna_sequence_length": 1968, + "functions": [ + "putative dehydratase" + ], + "id": "CDS_4212", + "location": [ + [ + "NC_000913", + 4524094, + "-", + 1968 + ] + ], + "md5": "a4e32a8924d5001a30f8b57d047bf3c9", + "parent_gene": "", + "protein_md5": "de964a17f0160d3701ac605ab9bc2db8", + "protein_translation": "MSVRNIFADESHDIYTVRTHADGPDGELPLTAEMLINRPSGDLFGMTMNAGMGWSPDELDRDGILLLSTLGGLRGADGKPVALALHQGHYELDIQMKAAAEVIKANHALPYAVYVSDPCDGRTQGTTGMFDSLPYRNDASMVMRRLIRSLPDAKAVIGVASCDKGLPATMMALAAQHNIATVLVPGGATLPAKDGEDNGKVQTIGARFANGELSLQDARRAGCKACASSGGGCQFLGTAGTSQVVAEGLGLAIPHSALAPSGEPVWREIARASARAALNLSQKGITTREILTDKAIENAMTVHAAFGGSTNLLLHIPAIAHQAGCHIPTVDDWIRINKRVPRLVSVLPNGPVYHPTVNAFMAGGVPEVMLHLRSLGLLHEDVMTVTGSTLKENLDWWEHSERRQRFKQLLLDQEQINADEVIMSPQQAKARGLTSTITFPVGNIAPEGSVIKSTAIDPSMIDEQGIYYHKGVAKVYLSEKSAIYDIKHDKIKAGDILVIIGVGPSGTGMEETYQVTSALKHLSYGKHVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRTGDLIEIKIDCRELHGEVNFLGTRSDEQLPSQEEATAILNARPSHQDLLPDPELPDDTRLWAMLQAVSGGTWTGCIYDVNKIGAALRDFMNKN", + "protein_translation_length": 655, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014089" + ], + [ + "gene_synonym", + "ECK4287" + ], + [ + "gene_synonym", + "EcoGene:EG12550" + ], + [ + "gene_synonym", + "GI:90111725" + ], + [ + "gene_synonym", + "GeneID:948825" + ], + [ + "gene_synonym", + "JW5775" + ], + [ + "gene_synonym", + "NP_418718.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39359" + ], + [ + "gene_synonym", + "b4298" + ], + [ + "gene_synonym", + "yjhH" + ] + ], + "dna_sequence": "ATGAAAAAATTCAGCGGCATTATTCCACCGGTATCCAGCACGTTTCATCGTGACGGAACCCTTGATAAAAAGGCAATGCGCGAAGTTGCCGACTTCCTGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCCAGCGCATGGCACTCGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCGTCACCCTACCGGTGATCCTGTACAACTTTCCGGATCTGACGGGTCAGGACTTAACCCCGGAAACCGTGACGCGTCTGGCTCTGCAAAACGAGAATATCGTTGGCATCAAAGACACCATCGACAGCGTTGGTCACTTGCGTACGATGATCAACACAGTTAAGTCGGTACGCCCGTCGTTTTCGGTATTCTGCGGTTACGATGATCATTTGCTGAATACGATGCTGCTGGGCGGCGACGGTGCGATAACCGCCAGCGCTAACTTTGCTCCGGAACTCTCCGTCGGCATCTACCGCGCCTGGCGTGAAGGCGATCTGGCGACCGCTGCGACGCTGAATAAAAAACTACTACAACTGCCCGCTATTTACGCCCTCGAAACACCGTTTGTCTCACTGATCAAATACAGCATGCAGTGTGTCGGGCTGCCTGTAGAGACATATTGCTTACCACCGATTCTTGAAGCATCTGAAGAAGCAAAAGATAAAGTCCACGTGCTGCTTACCGCGCAGGGCATTTTACCAGTCTGA", + "dna_sequence_length": 906, + "functions": [ + "putative lyase/synthase" + ], + "id": "CDS_4213", + "location": [ + [ + "NC_000913", + 4525010, + "-", + 906 + ] + ], + "md5": "a8fe523d69bd693ddbe7f4754e3b10db", + "parent_gene": "", + "protein_md5": "f58413580917ac17af43c50f7c68e9b7", + "protein_translation": "MKKFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGIKDTIDSVGHLRTMINTVKSVRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNKKLLQLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEASEEAKDKVHVLLTAQGILPV", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014092" + ], + [ + "gene_synonym", + "ECK4288" + ], + [ + "gene_synonym", + "EcoGene:EG12551" + ], + [ + "gene_synonym", + "GI:16132120" + ], + [ + "gene_synonym", + "GeneID:949100" + ], + [ + "gene_synonym", + "JW4261" + ], + [ + "gene_synonym", + "NP_418719.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39360" + ], + [ + "gene_synonym", + "b4299" + ], + [ + "gene_synonym", + "yjhI" + ] + ], + "dna_sequence": "ATGGTTCGCAAAGGGTGTAATTCATTAGTCCGTGCTGAAAAAATATTAACCCACATTGCATGGGTTGGTATGGCAAGTTATATGGAGTTATTAAATAAATTCCAGTACCCCAAAAGCAGCCTGCTTAATTTATTGAATGTAATGGTGGATTGTGGTTTCTTAATTAAAAACAAAAACGGCTACTATTCACTGGGAATAAAAAACTACGAATTGGGTTGTCAGGCGTTACACCGTCAAAATATATTTGAGGTGACTAAGCGGCCAATGCAGGAGTTGTCGCTGAAAAGTGGACTGGTTTGTCATCTTGGGGCGATGGAGAGCATTTCGGCTATCTATCTCGACAAGATCGAAAGTCCGGACTCTGTACCGACGAGCAAAAGCTGGATTGGCAAAAAACTTGAGTTGCATATTACCGCGTTGGGTAAGGCATTATTAGCCTGGAAGACACGAGAAGAACTGGATTATTTTTTAGAAGCACTCACGTTAACTCCACATACGCGCAATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCCGGTAGTTTATTCAGGAAATAAGATAGACAGCTATCTGGAATTGCTCCGGAAATGCGCTGAGCAAATATCATATGGGCTGGGATACAGAAACGAAAATGAGCACTTACGAAAAGGAAACTGA", + "dna_sequence_length": 789, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_4214", + "location": [ + [ + "NC_000913", + 4525803, + "-", + 789 + ] + ], + "md5": "3ea126af59025c6f4ffc943bbd369f4f", + "parent_gene": "", + "protein_md5": "fb377975b23d27d625c1dae18683ef79", + "protein_translation": "MVRKGCNSLVRAEKILTHIAWVGMASYMELLNKFQYPKSSLLNLLNVMVDCGFLIKNKNGYYSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSGLVCHLGAMESISAIYLDKIESPDSVPTSKSWIGKKLELHITALGKALLAWKTREELDYFLEALTLTPHTRNTFTDKKLFLEELQKTRLRGWAIDNEESTYGAVCLSMPVFNMYNRVNYAISLSGDPVVYSGNKIDSYLELLRKCAEQISYGLGYRNENEHLRKGN", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014094" + ], + [ + "gene_synonym", + "ECK4289" + ], + [ + "gene_synonym", + "EcoGene:EG12552" + ], + [ + "gene_synonym", + "GI:16132121" + ], + [ + "gene_synonym", + "GeneID:946830" + ], + [ + "gene_synonym", + "JW4262" + ], + [ + "gene_synonym", + "NP_418720.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39361" + ], + [ + "gene_synonym", + "b4300" + ], + [ + "gene_synonym", + "sgcR" + ], + [ + "gene_synonym", + "yjhJ" + ] + ], + "dna_sequence": "ATGAGCCAACAGAGACCTGACCGTATCAAACAGATGCTGCACTACCTGTGGCAACATCGTCACCTCTCCACACAGCAGGCCATGGAGCTTTTTGGCTATGCGGAAGCGACTGTCCGTCGTGATTTCCAGTATATTGTCAACCAGTATCCAGGCATGATCCGCGGTCACGGTTGCCTGGACTTCGACGACAGTACAGACGACAAAGAGTACGTCTTCGACGTGAAACGTACATTGCAATCTGTGGCGAAAAGAGAAATAGCTGCCCTTGCCCGAACAATGATCAAAGATGGCGACTGCTTTTTTCTCGACTCCGGCTCAACCTGCCTCGAACTGGCGAAATGCCTGGCCGATGCGCGGGTAAAGGTCATCTGCAACGACATTAAAATCGCCAATGAACTGGGCTGTTTTCCCCATGTGGAAAGTTACATTATCGGAGGACTGATTCGCCCAGGTTATTTTTCGGTAGGAGAGAGTCTGGCGCTGGAGATGATCAATGCCTTTTCCGTAGAACGTGCGTTTATCTCCTGCGATGCGCTGTCGCTGGAGACGGGGATCACCAATGCCACCATGTTTGAGGTCGGGGTGAAAACACGGATTATTCAACGCTCGCGTGAAGTTATTCTCATGGCCGATCACTCAAAATTTGATGCCGTTGAGCCGCATGCTGTAGCAACACTATCATGTATTAAAACGATCATCAGTGACAGCGGGTTACCTGAGACTATTGCACAGCGTTATCAGCGAGCCGGATGTCAGTTGTTTTTACCTCATTCAATAAAGTGA", + "dna_sequence_length": 783, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_4215", + "location": [ + [ + "NC_000913", + 4526888, + "-", + 783 + ] + ], + "md5": "0524742ccbc59562299fabb1a3e19bae", + "parent_gene": "", + "protein_md5": "940a65cecb9f28664682dbe1bf36b1b0", + "protein_translation": "MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK", + "protein_translation_length": 260, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014097" + ], + [ + "gene_synonym", + "ECK4290" + ], + [ + "gene_synonym", + "EcoGene:EG12553" + ], + [ + "gene_synonym", + "GI:16132122" + ], + [ + "gene_synonym", + "GeneID:948829" + ], + [ + "gene_synonym", + "JW4263" + ], + [ + "gene_synonym", + "NP_418721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39362" + ], + [ + "gene_synonym", + "b4301" + ], + [ + "gene_synonym", + "sgcE" + ], + [ + "gene_synonym", + "yjhK" + ] + ], + "dna_sequence": "ATGATCCTGCACCCTTCTCTCGCCAGCGCAAATCCTCTGCACTATGGTCGTGAGCTGACGGCATTGGACAATCTGGATTTTGGGAGCCTGCATCTGGATATTGAGGACAGCAGCTTCATTAACAACATTACGTTTGGGATGAAAACGGTGCAGGCCGTCGCCAGACAGACGCCTCATCCCTTGTCCTTTCATTTCATGCTTGCCCGGCCACAGCGCTGGTTTAACGCGCTGGCTGAAATCAGACCCGCGTGGATCTTCGTTCATGCAGAAACGCTGGACTATCCTTCGGAAACGTTAACTGAGATCCGCCATACCGGCGCACGAGCCGGACTGGTATTTAATCCGGCAACCCCGATCGACGCCTGGCGATATCTGGCGTCTGAGCTGGACGGAGTGATGGTGATGACCAGTGAGCCCGATGGGCAGGGACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTACGCACGGCTTTTCCTCAGACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGGCGCGCCCTGTTCTCTTCATCTGACTATCGCGCGACCTTAGCTCAATTCGCCACCCTGTAA", + "dna_sequence_length": 633, + "functions": [ + "putative epimerase" + ], + "id": "CDS_4216", + "location": [ + [ + "NC_000913", + 4527537, + "-", + 633 + ] + ], + "md5": "731b1d17129d51b879dbd7ed20b9bf69", + "parent_gene": "", + "protein_md5": "897a4e7a4f1d051fb40e6cf8bd9341e2", + "protein_translation": "MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTECWADGGITLAAAQQLAAAGAQHMVIGRALFSSSDYRATLAQFATL", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014100" + ], + [ + "gene_synonym", + "ECK4291" + ], + [ + "gene_synonym", + "EcoGene:EG12554" + ], + [ + "gene_synonym", + "GI:16132123" + ], + [ + "gene_synonym", + "GeneID:948831" + ], + [ + "gene_synonym", + "JW4264" + ], + [ + "gene_synonym", + "NP_418722.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39363" + ], + [ + "gene_synonym", + "b4302" + ], + [ + "gene_synonym", + "sgcA" + ], + [ + "gene_synonym", + "yjhL" + ] + ], + "dna_sequence": "ATGATTAACGATATTAAATGGGTACAGGCACAACGTAAAGCCACCGACTGGCGTCAGGCCGTGGAAATCGCCACCCGCCCGCTGGTAGCCTATGGTGCCGCGCAGCCATGCTACGTTAATGGGATCATCGAAAATACCCTTAACTGGGGGCCTTATTATCTGATAGCCCCAGGAATCGCCTTGCCTCACGCCCGACCAGAGCAAGGCGCAAACTATAATCAGGTCAGTATCACCACGCTACGCACCCCGGTCGCCTTTGGTAACGAGGAGTGCGACCCCGTCTGGCTGCTTCTCTGCGTCAGCGCCACGGATGCCAACGCACATATTTTGACCATTCAGCGCATCAGCCAGTTTATTGATTCGCCACAACGCTTAACGGCAGTGGGAAATGCCAGCACAGACGATGCACTGTTTGCGCTGGTATCAGGTTAA", + "dna_sequence_length": 432, + "functions": [ + "putative phosphotransferase enzyme IIA component" + ], + "id": "CDS_4217", + "location": [ + [ + "NC_000913", + 4527980, + "-", + 432 + ] + ], + "md5": "f3fe7f6216473b1d8786f044f16f7936", + "parent_gene": "", + "protein_md5": "e0cd9049f038eec06d6236acd0441ae6", + "protein_translation": "MINDIKWVQAQRKATDWRQAVEIATRPLVAYGAAQPCYVNGIIENTLNWGPYYLIAPGIALPHARPEQGANYNQVSITTLRTPVAFGNEECDPVWLLLCVSATDANAHILTIQRISQFIDSPQRLTAVGNASTDDALFALVSG", + "protein_translation_length": 143, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014102" + ], + [ + "gene_synonym", + "ECK4292" + ], + [ + "gene_synonym", + "EcoGene:EG12555" + ], + [ + "gene_synonym", + "GI:16132124" + ], + [ + "gene_synonym", + "GeneID:948834" + ], + [ + "gene_synonym", + "JW4265" + ], + [ + "gene_synonym", + "NP_418723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39364" + ], + [ + "gene_synonym", + "b4303" + ], + [ + "gene_synonym", + "sgcQ" + ], + [ + "gene_synonym", + "yjhM" + ] + ], + "dna_sequence": "ATGAGTTGGCTGAAAGAGGTTATTGGGACGGAAAAAGCGGTCATCGCCATGTGCCATCTACGTGCATTGCCCGGCGACCCGAGTTTTGATGCGCAGTTGGGGATGAACTGGGTTATCGACAAAGCCTGGGACGATCTGATGGCGCTCCAAAATGGTGGGGTGGATGCAGTCATGTTCTCCAACGAGTTTAGTCTTCCCTATCTCACGAAGGTGCGTCCGGAAACCACTGCGGCAATGGCACGAATCATCGGGCAATTAATGAGCGATATCCGCATCCCGTTTGGCGTGAATGTTCTGTGGGATCCGGTCGCCTCATTCGACCTGGCGATGGCTACCGGCGCTAAGTTTATCCGCGAGATATTTACCGGTGCCTATGCCAGCGACTTTGGCGTCTGGGACACTAACGTCGGTGAGACCATCCGTCATCAACACCGGATTGGTGCAGGCGAAGTGAAAACCTTGTTCAATATCGTCCCAGAGGCCGCCGTGTATCTGGGCAATCGCGATATCTGTTCTATTGCTAAATCGACAGTATTTAACAACCATCCTGATGCGCTCTGTGTTTCTGGCCTGACCGCCGGGACGCGTACCGACAGCGCGCTGTTAAAACGGGTCAAAGAAACGGTGCCTGACACCGTCGTGTTGGCCAACACGGGCGTCTGCCTGGAAAACGTGGAGGAACAACTCAGTATCGCCGATGGCTGTGTGACCGCAACCACCTTTAAAAAGGACGGCGTTTTTGCCAATTTCGTTGACCAGGCGCGAGTCAGTCAGTTTATGGAGAAAGTGCATCATATACGCCGATAA", + "dna_sequence_length": 807, + "functions": [ + "putative nucleoside triphosphatase" + ], + "id": "CDS_4218", + "location": [ + [ + "NC_000913", + 4528917, + "-", + 807 + ] + ], + "md5": "e8f254891cef572ecee3e6cdddd006a6", + "parent_gene": "", + "protein_md5": "94cec7342cc2d33a20ea52ca1c7d546d", + "protein_translation": "MSWLKEVIGTEKAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWDPVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVSGLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFANFVDQARVSQFMEKVHHIRR", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014105" + ], + [ + "gene_synonym", + "ECK4293" + ], + [ + "gene_synonym", + "EcoGene:EG12556" + ], + [ + "gene_synonym", + "GI:16132125" + ], + [ + "gene_synonym", + "GeneID:946849" + ], + [ + "gene_synonym", + "JW4266" + ], + [ + "gene_synonym", + "NP_418724.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39365" + ], + [ + "gene_synonym", + "b4304" + ], + [ + "gene_synonym", + "sgcC" + ], + [ + "gene_synonym", + "yjhN" + ] + ], + "dna_sequence": "ATGTTTGATTACATCCTGTCTCTCGGCGGTACCGTTTTCGTCCCTATCATCATGATCGTGATTGGCCTTATCTTCCGCATCCCCTGGCTGCAGGCGATTAAGGCAGGGGTAACGGTTGGGATTGGTTTTGTCGGTATGGGACTGGTGATCGTCATGGCGATCGACAGCCTCAGTCCCCCTATCAAAGTGATGATTGAGCGTTTCGGCCTAGCCCTGCATGTCTTTGACGTTGGCGCAGGCCCTGCCTCCGGCGTTGGTTATGCGACAGCCATTGGCGCCATGATTATCCCAGTTATTTTTCTTCTCAATGTCGCCATGCTGGTCACCCGTCTGACCAAAACGATGAACGTCGATATTTACAATTACTGGCACTACGCCATTACGGGTACGGTGGTCCAGCTTATGACCGGTAGCCTGATTTATGGTGTGCTGGGGGCAATCTGCCATGCGGCGCTATCGTTAAAAATGGCCGACTGGACGGCAAAACGGGTACAGAACATCGTCGGGCTGGAAGGTATTTCGATACCGCAAGGCTACGGTTCCAGTTCAGTACCGCTTTTCGTTCTACTTGATGCTATCTATGAAAAAATCCCTTTCATGAAGGGACGCAATATCGATGCTCAGGAGATCCAGAAACGCTACGGCATGGTCGGCGATCCGGTGATTATCGGCGTAGTGCTCGGTCTGATTTTTGGCCTGGCGGCTGGTGAAGGCTTTAAAGGTTGCGCCAGTCTGATGATTACCGTTGCGGCAATCATGGTGTTGTTCCCGCGCATGATCCGCCTGATTGTTGAGGGCCTGCTGCCCATCTCCGACGGTGCAAGAAAGTTCTTCCAGAAATATTTCAAAGGACGTGAAGTGTATATCGGTCTGGATACTGCTGTGACGCTGGGGCATCCAACCACCATTGCTGTCGGTCTGCTACTGATACCCATTATGTTAATTCTGGCCAGCATTTTACCGGGCAACAAAGTGTTACCCCTCGCAGACCTGCCGGTAGCACCGTTCTTTATCTGTATGGCTACGGTTATCCACCGCGGAGACCTGGTCAGGACGTTGATAAGCGGGGTCATCGTGATGATTACCGTCCTGCTGATCGCCACCCAGTTCGCGCCTTACTTCACTGAAATGGCGCTCAAAGGCGGTTTCAGTTTTGCCGGTGAAAGTGCGCAAATCTCAGCGTTGTCCGTGGGCAATATGTTCGGTTGGTCGATTTCTGAATTGATGTCGCTTGGGATTATTGGCGTTGTCGTGGCGGTCGGTATTGTCGCCAGCGTCGTGCTGTTCTTACGTAAACGTGAATTATCGGAATAA", + "dna_sequence_length": 1314, + "functions": [ + "putative PTS system EIIC permease component" + ], + "id": "CDS_4219", + "location": [ + [ + "NC_000913", + 4530243, + "-", + 1314 + ] + ], + "md5": "0a6279819641e3010c961c07e146ee4d", + "parent_gene": "", + "protein_md5": "64a67c54f4b43fa50122167135447c57", + "protein_translation": "MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFKGCASLMITVAAIMVLFPRMIRLIVEGLLPISDGARKFFQKYFKGREVYIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVMITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAVGIVASVVLFLRKRELSE", + "protein_translation_length": 437, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285086" + ], + [ + "gene_synonym", + "ECK4294" + ], + [ + "gene_synonym", + "EcoGene:EG14343" + ], + [ + "gene_synonym", + "GI:94541133" + ], + [ + "gene_synonym", + "GeneID:1450295" + ], + [ + "gene_synonym", + "JW5967" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P58035" + ], + [ + "gene_synonym", + "YP_588476.1" + ], + [ + "gene_synonym", + "b4565" + ], + [ + "gene_synonym", + "sgcB" + ] + ], + "dna_sequence": "ATGAAAAAGATCCTTGTGGCATGCGGTACCGGCATGTCGACTTCAACCATGATTGCACACAAGCTGCAAGAGTTCCTGACTGAACAGGGCATTTCAGCCACTACCGCCCAATGCTGTCTGAATGAGATCCCTCTTAACTGTAACGGTATGGACCTTATTGTAACCTCCATGCGAACCAACAGTGATTACGGCATCCCTACGCTTAATGGCGCCGCCCTGCTCACAGGGATCAACGACGACGCGTTAAAACAACAAATCAAGGCTCTGTTAACTCAATAA", + "dna_sequence_length": 279, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_4220", + "location": [ + [ + "NC_000913", + 4530533, + "-", + 279 + ] + ], + "md5": "ddf35c85fdb3cae6149a55b3928f48f1", + "parent_gene": "", + "protein_md5": "c162aab7d8bceba320486920e09cd85c", + "protein_translation": "MKKILVACGTGMSTSTMIAHKLQEFLTEQGISATTAQCCLNEIPLNCNGMDLIVTSMRTNSDYGIPTLNGAALLTGINDDALKQQIKALLTQ", + "protein_translation_length": 92, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014112" + ], + [ + "gene_synonym", + "ECK4295" + ], + [ + "gene_synonym", + "EcoGene:EG12557" + ], + [ + "gene_synonym", + "GI:90111726" + ], + [ + "gene_synonym", + "GeneID:948840" + ], + [ + "gene_synonym", + "JW5776" + ], + [ + "gene_synonym", + "NP_418725.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39366" + ], + [ + "gene_synonym", + "b4305" + ], + [ + "gene_synonym", + "sgcX" + ], + [ + "gene_synonym", + "yjhO" + ] + ], + "dna_sequence": "ATGTCATTTTCTGTGCAGGAAACCCTGTTCTCGCTTTTGCAGCACAATGCGATTTCAGGACACGAAAACGCTGTCGCTGACGTCATGCTGTGCGAATTCAGGCGTCAGGCAAAAGAGGTCTGGCGAGACAGGCTTGGGAATGTCGTCGCGCGCTACGGTAGTGATAAACCCGATGCGCTGCGACTGATGATTTTTGCGCATATGGATGAAGTCGGTTTTATGGTGCGCAAAATAGAGCCGTCTGGATTTTTACGCTTTGAACGCGTAGGCGGTCCTGCGCAGGTCACTATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTTGCCAAAGGCGACGAGCGCACGCAGTCACCTTCTGTCGACAAACTGTGGATTGATATTGGTGCCAAAGACAAAGACGACGCTATACGGATGGGCATTCAGGTCGGTACGCCTGTCACTCTGTATAACCCGCCGCAACTCCTGGCAAACGATCTGGTGTGCAGTAAAGCACTAGACGATCGTCTAGGCTGTACTGCCCTGCTCGGTGTAGCGGATGCTATCAGTACTATGGAGCTTGATATCGCCGTTTATCTGGTGGCTTCGGTACAGGAAGAATTTAATATCCGCGGCATTGTTCCCGTATTACGCCGTGTAAAACCTGACCTGGCGATTGGTATTGATATCACTCCATCGTGTGACACCCCTGATTTACACGATTATTCCGAGGTCAGGATTAATCAGGGCGTTGGGATCACCTGCCTGAACTACCATGGTCGGGGAACGCTGGCCGGATTAATCACGCCTCCTCGCCTGATACGGATGTTGGAACAGACGGCTCTTGAACACAACATTCCGGTGCAGCGAGAAGTGGCTCCCGGCGTGATAACAGAAACCGGTTATATCCAGGTTGAGCAGGATGGTATTCCCTGCGCCAGTCTCTCTATTCCTTGTCGCTATACCCATTCTCCGGCGGAGGTTGCCAGCCTGCGTGATTTGACTGATTGCATCCGCCTATTGACCGCTCTGGCAGGTATGTCAGCAGCACATTTCCCCGTTGAGCCTGATTCAGGCACTACACAAGAGGCACATCCATTATGA", + "dna_sequence_length": 1122, + "functions": [ + "putative endoglucanase with Zn-dependent exopeptidase domain" + ], + "id": "CDS_4221", + "location": [ + [ + "NC_000913", + 4531651, + "-", + 1122 + ] + ], + "md5": "15e0e36a2fc73225f8de2d6266e2a0eb", + "parent_gene": "", + "protein_md5": "c3b618b7f16de54cefb4781d1516ca3e", + "protein_translation": "MSFSVQETLFSLLQHNAISGHENAVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDEVGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKGDERTQSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALLGVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLHDYSEVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVITETGYIQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTALAGMSAAHFPVEPDSGTTQEAHPL", + "protein_translation_length": 373, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4453" + ], + [ + "gene_synonym", + "EcoGene:EG14442" + ], + [ + "gene_synonym", + "GeneID:5625582" + ], + [ + "gene_synonym", + "b4656" + ], + [ + "gene_synonym", + "yjhY" + ] + ], + "dna_sequence": "ATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATGCACACAGTGCCAGTGATCAATATTGTGCGTAATGCAGCGACAGCAACGGCAATCTCAAACCCTGGGAAGAAGCGGTATCAGGTTTAGCCAGCTTCCTTGATTCCTGGCAAAAAGTCGGCCCGGAGGAAGCACATAAGCGTGCAAAACGTTATCTGACGGCAATGCCAGCCTGGGCTCATAAAGCGGAGAGTGATTTGAGCTGA", + "dna_sequence_length": 261, + "id": "CDS_4222", + "location": [ + [ + "NC_000913", + 4532310, + "-", + 261 + ] + ], + "md5": "88d5640e40c8ba691154fde9aab75d75", + "parent_gene": "", + "protein_md5": "b1cafeb6f134a798b3e17aef8d36815b", + "protein_translation": "MSQHEQFCQACGMPMSAPDAHSASDQYCA", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014115" + ], + [ + "gene_synonym", + "ECK4296" + ], + [ + "gene_synonym", + "EcoGene:EG12558" + ], + [ + "gene_synonym", + "GI:16132127" + ], + [ + "gene_synonym", + "GeneID:946851" + ], + [ + "gene_synonym", + "JW4268" + ], + [ + "gene_synonym", + "NP_418726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39367" + ], + [ + "gene_synonym", + "b4306" + ], + [ + "gene_synonym", + "yjhP" + ] + ], + "dna_sequence": "ATGGATATCCCACGTATTTTTACCATCAGCGAAAGTGAACACCGCATCCATAACCCGTTCACCGAAGAGAAGTACGCCACGCTGGGTCGCGTGCTGCGCATGAAGCCGGGCACCCGCATTCTTGACCTCGGCAGCGGCTCGGGCGAGATGCTCTGCACCTGGGCCAGGGATCATGGCATTACGGGGACTGGCATCGACATGAGTTCGCTCTTCACCGCGCAGGCAAAGCGTCGCGCGGAAGAACTCGGCGTCAGCGAACGCGTACATTTTATTCATAACGATGCGGCCGGTTACGTCGCAAATGAAAAATGTGACGTGGCGGCCTGCGTCGGCGCGACATGGATTGCCGGTGGGTTTGCCGGGGCGGAGGAGCTGCTAGCGCAAAGCCTGAAACCGGGCGGGATCATGCTTATCGGCGAACCCTACTGGCGTCAGCTACCAGCAACAGAAGAAATAGCCCAGGCCTGCGGCGTCAGCTCGACAAGCGATTTCCTGACGCTGCCAGGACTTGTCGGAGCGTTCGACGATCTCGGCTATGACGTGGTGGAAATGGTACTGGCAGACCAGGAAGGCTGGGACCGGTATGAAGCCGCAAAATGGCTGACCATGCGCCGCTGGCTGGAAGCGAATCCTGACGATGACTTCGCCGCCGAAGTCAGGGCCGAACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAA", + "dna_sequence_length": 747, + "functions": [ + "putative methyltransferase" + ], + "id": "CDS_4223", + "location": [ + [ + "NC_000913", + 4533183, + "-", + 747 + ] + ], + "md5": "9c99bab6a37d8d2652a6bba8bcb0bed0", + "parent_gene": "", + "protein_md5": "e1054c8967dc8e8814744e8a5addcd67", + "protein_translation": "MDIPRIFTISESEHRIHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMVLADQEGWDRYEAAKWLTMRRWLEANPDDDFAAEVRAELNIAPKRYVTYARECFGWGVFALIAR", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014119" + ], + [ + "gene_synonym", + "ECK4297" + ], + [ + "gene_synonym", + "EcoGene:EG12559" + ], + [ + "gene_synonym", + "GI:16132128" + ], + [ + "gene_synonym", + "GeneID:949059" + ], + [ + "gene_synonym", + "JW4269" + ], + [ + "gene_synonym", + "NP_418727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39368" + ], + [ + "gene_synonym", + "b4307" + ], + [ + "gene_synonym", + "yjhQ" + ] + ], + "dna_sequence": "ATGACAGTACACCACTTCACTTTTCATATCACAGATAAAAGTGATGCCAGTGATATCCGGGAAGTCGAAACCCGCGCATTTGGCTTCAGCAAAGAAGCCGATTTAGTGGCCTCTTTACTTGAGGATGAAAGCGCGCGCCCCGCGTTATCGCTGCTAGCCCGGTATGAAGGCAAAGCCGTCGGGCATATTTTATTTACCCGGGCAACCTTCAAAGGAGAAATGGATTCACCGTTGATGCACATCCTCGCTCCCCTGGCGGTCATACCGGAATACCAAGGGATGGGCGTGGGAGGACGGTTGATACGCACTGGCATCGAGCACCTGAGGTTGATGGGCTGCCAGACGGTTTTTGTTCTCGGCCACGCCACCTATTACCCCCGACATGGGTTCGAACCCTGTGCCGGAGACAAAGGCTATCCGGCACCTTATCCCATCCCGGAGGAGCACAAAGCCTGCTGGATGATGCAATCACTCACCGCTCAGCCCATGACCCTGACCGGCCACATCCGGTGCGCAGACCCTGATGAAACCGGAGCACTGACGTGA", + "dna_sequence_length": 546, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_4224", + "location": [ + [ + "NC_000913", + 4533784, + "-", + 546 + ] + ], + "md5": "fb0008e0de86e59f838b8d90afe1e4f0", + "parent_gene": "", + "protein_md5": "b2945841b68947a5b6a227480618cb62", + "protein_translation": "MTVHHFTFHITDKSDASDIREVETRAFGFSKEADLVASLLEDESARPALSLLARYEGKAVGHILFTRATFKGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLGHATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQSLTAQPMTLTGHIRCADPDETGALT", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285087" + ], + [ + "gene_synonym", + "ECK4298" + ], + [ + "gene_synonym", + "EcoGene:EG14430" + ], + [ + "gene_synonym", + "GI:94541138" + ], + [ + "gene_synonym", + "GeneID:1450297" + ], + [ + "gene_synonym", + "JW5968" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEU2" + ], + [ + "gene_synonym", + "YP_588477.1" + ], + [ + "gene_synonym", + "b4566" + ], + [ + "gene_synonym", + "yjhX" + ] + ], + "dna_sequence": "ATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTCGCTAAAGGTAGACGTATTGCGCACGTCCGCGATTCTTCAGGCCGCGTCACTTCCGTTGAATGCTACAGCCGCGAAGGGCTGTTGCTGACCGACTGCACGCTCGCCGTCTTCAAAAAACTCAAAACCAAAAAACTTATCAAGTCCGTCAATGGCCAGCCCTATCGAATCAACACCACCGAGCTGAATAAAGTTCGCGCTCAGCTCGATAATCGCTAA", + "dna_sequence_length": 258, + "functions": [ + "UPF0386 family protein" + ], + "id": "CDS_4225", + "location": [ + [ + "NC_000913", + 4534053, + "-", + 258 + ] + ], + "md5": "79b7e73416edfb6f91ef86f519777dc8", + "parent_gene": "", + "protein_md5": "21dd100becd619b627a33a2d4ba40fa1", + "protein_translation": "MNLSRQEQHTLHVLAKGRRIAHVRDSSGRVTSVECYSREGLLLTDCTLAVFKKLKTKKLIKSVNGQPYRINTTELNKVRAQLDNR", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4455" + ], + [ + "gene_synonym", + "EcoGene:EG14447" + ], + [ + "gene_synonym", + "GeneID:5625583" + ], + [ + "gene_synonym", + "b4657" + ], + [ + "gene_synonym", + "yjhZ" + ] + ], + "dna_sequence": "ATGACGCAGGTTTTGATTGGTGATATCTATTTACGTCAGCAATGCGATGTGTTTTGGCTCGGCTATACCATCAGTCCCGCTTATGCTCGCCAGGGATATGCAATTGAAGCAATTACCGCCACGATTGACTGAATAAAAGAGAACGGTTTTTCACTCATCAAAGCCGGTGTGAATCCGGAAAATACCCTTTCAAAAAAATTACTTATCAGGATTGGCTTCAATTTTTCAAGCATCGAAGATGGGTGA", + "dna_sequence_length": 246, + "id": "CDS_4226", + "location": [ + [ + "NC_000913", + 4534675, + "-", + 246 + ] + ], + "md5": "69cefa073b65c24b49571e51e6a3ed2e", + "parent_gene": "", + "protein_md5": "781164489585376cbb9a56d651124bab", + "protein_translation": "MTQVLIGDIYLRQQCDVFWLGYTISPAYARQGYAIEAITATID", + "protein_translation_length": 43, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014128" + ], + [ + "gene_synonym", + "ECK4299" + ], + [ + "gene_synonym", + "EcoGene:EG12560" + ], + [ + "gene_synonym", + "GeneID:944740" + ], + [ + "gene_synonym", + "JW4271" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39369" + ], + [ + "gene_synonym", + "b4308" + ], + [ + "gene_synonym", + "yjhR" + ] + ], + "dna_sequence": "TATTCGATAATAAATGGGTCTGGAAAAAGTGCAGCATCTGGCAGCGTAATGCAGGTAGCCCAGTTCAACTCTCACTACCAGTATGATCCCAAGTTCGAGCGCGGAATGTATCTGTATGAGCATCGTCGCTGTTTCAATAACATCATCGACTACTGTAACTCACTTTGCTATCACGGTAAGTTGCAGCCTAAAAGAGGGATGGAAAAAGGACGAATTTTCCCCGCAATGGGATATTTACATATTGATGGTAGAGGCATGAAGCCAAATGGAGGGAGCCGTCATAACCCTCTTGAAGCTGAAACAATAGCAGCATGGCTGGTGGCACATAAGGATGATATAGAGCGCCATTACGGGGAACCACTGTACAAAGTTGTTGGTGTTGTGACGCCATTTTCGGCGCAGGTTAATGCTATCAAAATGTCATTGCGTAAGCTGGAAATTAATGGCAAAGACGAGCAGGGTTTACTGACAGTGGGGACTGTGCACTCCTTGCAGGGGGCGGAAAGGGCGATTGTTCTCTTTTCTCCTGTCTACTCAAAACATGAAGATGGCAGGTTTCTTGATAGCAACAGCACTATCCTCAATGTTGCTGTCTCACGCGCTAAAGATAGTTTTCTGGTATTTGGCGATATGGACCTTATCGAGATGCAGCCCGCATTTTCGCCGCGAGGGTTATTGGCAAAATATCTCTTTTCTTCAGATAATAATGCGTTGCAATTTGAGTTTCAGAAACGACAGGATTTAATTTCCGCACATACACAAATTTCAACGCTGCATGGTGTGGAGCAGCATGATGAATTTTTGAACAAGACTCTTGCCGGAGCTCAAAAGAAAATAACGATTATTTCCCCTTGGTTATCCTGGCAAAAAGTGGAGCAAACGGGATTTCTGGCATCAATGGCTTTGGCCCGTTCCCGGGGCATTGATATTACCGTGGTGACGGATAAAAACTGCAATATAGCGCATGTCGATGATGATAAGCGTCAGGAGAAACAACATCTGCTGAATGATGCTGTTGAAAAGCTCAATAAGATGGGTATCGCTACGAAATTGGTTAATCGTGTTCACAGCAAAATTGTGATTGAGGATGAAGAACTGCTGTGTGTCGGATCTTTTAACTGGTTCAGTGCTACACGGGAAGATAAGTATCAACGATACGATACGTCTTTGGTGTACCGTGGTGAAGGCGTAAAAAATGAAATAAAGGCAATATATGGTAGTCTGGATCAACGTCAGCTTTAA", + "dna_sequence_length": 1242, + "id": "CDS_4227", + "location": [ + [ + "NC_000913", + 4534791, + "+", + 213 + ], + [ + "NC_000913", + 4535003, + "+", + 1029 + ] + ], + "md5": "8a96637a8b8eeb206e2bbe037d3994db", + "parent_gene": "", + "protein_md5": "43d5052af7cadb7bc3b2d0b28dc2a1f7", + "protein_translation": "YSIINGSGKSAASGSVMQVAQFNSHYQYDPKFERGMYLYEHRRCFNNIIDYCNSLCYHGKLQPKRGMEKGRIFPAMGYLHIDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKVVGVVTPFSAQVNAIKMSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVYSKHEDGRFLDSNSTILNVAVSRAKDSFLVFGDMDLIEMQPAFSPRGLLAKYLFSSDNNALQFEFQKRQDLISAHTQISTLHGVEQHDEFLNKTLAGAQKKITIISPWLSWQKVEQTGFLASMALARSRGIDITVVTDKNCNIAHVDDDKRQEKQHLLNDAVEKLNKMGIATKLVNRVHSKIVIEDEELLCVGSFNWFSATREDKYQRYDTSLVYRGEGVKNEIKAIYGSLDQRQL", + "protein_translation_length": 413, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014130" + ], + [ + "gene_synonym", + "ECK4300" + ], + [ + "gene_synonym", + "EcoGene:EG12561" + ], + [ + "gene_synonym", + "GI:16132130" + ], + [ + "gene_synonym", + "GeneID:948835" + ], + [ + "gene_synonym", + "JW4272" + ], + [ + "gene_synonym", + "NP_418729.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39370" + ], + [ + "gene_synonym", + "b4309" + ], + [ + "gene_synonym", + "nanS" + ], + [ + "gene_synonym", + "yjhS" + ] + ], + "dna_sequence": "ATGAACGCAATAATATCGCCCGATTATTACTATGTTCTTACCGTTGCTGGTCAGTCTAATGCCATGGCGTATGGCGAAGGACTGCCATTACCGGACAGGGAAGATGCGCCTCATCCCAGAATTAAACAATTAGCGAGATTTGCGCATACGCATCCCGGAGGCCCGCCATGTCACTTTAACGACATTATTCCACTGACTCACTGCCCACACGATGTTCAGGATATGCAGGGTTATCACCATCCTCTGGCAACGAATCATCAAACACAGTACGGCACCGTTGGCCAGGCACTGCATATTGCACGGAAATTACTGCCCTTCATTCCTGATAATGCAGGGATTCTTATCGTTCCGTGTTGCCGTGGCGGATCGGCTTTTACCGCGGGCAGCGAAGGGACATATTCAGAACGGCACGGAGCCAGCCATGATGCTTGTCGTTGGGGAACGGATACTCCGCTGTACCAGGATTTAGTCAGCAGAACGCGAGCCGCACTGGCAAAAAATCCGCAGAACAAATTCCTCGGCGCATGCTGGATGCAAGGCGAATTTGACTTAATGACCAGTGACTACGCGTCACACCCTCAACACTTTAATCATATGGTTGAAGCCTTTCGTAGGGATCTAAAACAATACCATTCTCAGCTTAATAATATTACTGACGCGCCGTGGTTTTGCGGCGATACCACCTGGTACTGGAAAGAAAATTTCCCGCATTCGTATGAAGCTATTTATGGCAATTATCAAAATAATGTTTTAGCCAATATTATTTTCGTCGACTTCCAGCAACAAGGTGAAAGAGGACTGACGAACGCGCCTGATGAAGACCCGGACGATTTAAGCACGGGATATTACGGTTCAGCGTACCGGTCACCGGAGAACTGGACGACGGCACTGCGAAGCAGTCATTTCAGCACTGCAGCCCGTCGGGGGATTATTTCTGACAGATTTGTAGAAGCAATTTTGCAGTTTTGGCGCGAAAGGTGA", + "dna_sequence_length": 981, + "functions": [ + "9-O-acetyl N-acetylneuraminic acid esterase" + ], + "id": "CDS_4228", + "location": [ + [ + "NC_000913", + 4537594, + "-", + 981 + ] + ], + "md5": "c1a7ddc8d9bd9adfc19d4a18de2c5fa5", + "parent_gene": "", + "protein_md5": "7d718bbf79ae0a5658a61f61f863b5bd", + "protein_translation": "MNAIISPDYYYVLTVAGQSNAMAYGEGLPLPDREDAPHPRIKQLARFAHTHPGGPPCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARKLLPFIPDNAGILIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRTRAALAKNPQNKFLGACWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNITDAPWFCGDTTWYWKENFPHSYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPDDLSTGYYGSAYRSPENWTTALRSSHFSTAARRGIISDRFVEAILQFWRER", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014132" + ], + [ + "gene_synonym", + "ECK4301" + ], + [ + "gene_synonym", + "EcoGene:EG12562" + ], + [ + "gene_synonym", + "GI:90111727" + ], + [ + "gene_synonym", + "GeneID:949106" + ], + [ + "gene_synonym", + "JW5777" + ], + [ + "gene_synonym", + "NP_418730.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39371" + ], + [ + "gene_synonym", + "b4310" + ], + [ + "gene_synonym", + "nanM" + ], + [ + "gene_synonym", + "yjhT" + ] + ], + "dna_sequence": "ATGAATAAAACAATAACGGCGCTTGCTATCATGATGGCTTCATTTGCCGCAAACGCGTCTGTATTACCGGAAACTCCTGTGCCATTTAAAAGTGGTACCGGAGCAATTGATAACGACACTGTCTACATTGGTTTAGGTAGCGCAGGTACGGCATGGTACAAGCTGGATACACAGGCCAAAGATAAAAAATGGACAGCGTTAGCTGCATTCCCTGGCGGACCAAGAGATCAAGCAACCTCTGCATTTATTGATGGCAATCTGTATGTGTTTGGCGGCATTGGCAAAAACAGCGAGGGCTTGACTCAGGTATTTAATGACGTACACAAATACAACCCCAAAACCAATAGTTGGGTTAAATTGATGTCGCACGCGCCGATGGGCATGGCGGGCCATGTGACTTTTGTACACAACGGCAAGGCTTATGTTACTGGTGGTGTTAACCAGAATATCTTCAATGGCTATTTTGAAGATCTCAACGAGGCTGGAAAAGATTCAACCGCTATAGATAAAATCAATGCTCACTATTTTGACAAAAAAGCAGAAGATTATTTCTTCAATAAGTTTCTGTTGTCTTTTGATCCCTCAACACAGCAATGGAGTTACGCTGGCGAATCGCCCTGGTACGGAACGGCTGGTGCGGCGGTTGTGAATAAAGGTGATAAAACCTGGCTTATTAATGGCGAAGCCAAACCAGGATTGCGAACGGATGCCGTATTTGAACTTGATTTCACCGGTAATAATTTAAAATGGAATAAGCTTGCTCCCGTCTCATCACCAGATGGCGTAGCTGGCGGTTTTGCGGGGATAAGCAATGATTCTCTTATATTTGCCGGAGGGGCCGGATTCAAAGGTTCACGAGAAAATTACCAGAACGGTAAGAACTATGCGCATGAAGGCCTGAAAAAATCATATAGCACTGATATTCATCTTTGGCATAACGGGAAATGGGATAAATCGGGTGAATTATCGCAAGGTCGGGCCTACGGAGTATCATTGCCCTGGAATAATAGTCTATTGATTATTGGCGGTGAAACTGCAGGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAA", + "dna_sequence_length": 1107, + "functions": [ + "N-acetylneuraminic acid mutarotase" + ], + "id": "CDS_4229", + "location": [ + [ + "NC_000913", + 4538765, + "-", + 1107 + ] + ], + "md5": "fdbc7063a9d7d9e578f45b5c0ffe0020", + "parent_gene": "", + "protein_md5": "780afeee808c0f4c3e9e112a503aaebd", + "protein_translation": "MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014136" + ], + [ + "gene_synonym", + "ECK4302" + ], + [ + "gene_synonym", + "EcoGene:EG12389" + ], + [ + "gene_synonym", + "GI:90111728" + ], + [ + "gene_synonym", + "GeneID:946843" + ], + [ + "gene_synonym", + "JW5778" + ], + [ + "gene_synonym", + "NP_418731.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69856" + ], + [ + "gene_synonym", + "b4311" + ], + [ + "gene_synonym", + "nanC" + ], + [ + "gene_synonym", + "yjhA" + ] + ], + "dna_sequence": "ATGAAAAAGGCTAAAATACTTTCTGGCGTATTATTACTGTGCTTTTCGTCCCCATTAATTTCTCAGGCTGCGACACTGGACGTACGTGGTGGATATCGTAGTGGAAGCCACGCCTATGAGACTCGACTCAAAGTCAGTGAGGGATGGCAAAATGGATGGTGGGCAAGCATGGAAAGTAATACCTGGAATACCATTCATGATAATAAAAAGGAAAATGCCGCACTCAATGATGTTCAGGTTGAAGTTAATTACGCGATTAAACTTGATGATCAATGGACGGTGCGCCCGGGAATGTTAACGCATTTTAGCAGCAACGGCACACGCTACGGACCCTACGTAAAACTGTCCTGGGACGCGACAAAAGATCTTAATTTTGGCATTCGCTATCGTTACGACTGGAAAGCTTACCGACAACAAGACTTATCCGGTGATATGTCTCGTGATAACGTTCATCGTTGGGATGGATATGTCACTTACCATATTAATAGTGATTTCACCTTCGCATGGCAAACGACGCTATACAGCAAACAGAACGATTATCGCTATGCAAACCATAAGAAATGGGCGACGGAAAATGCATTTGTTCTACAATACCATATGACGCCCGATATTACGCCATACATAGAATATGACTACCTTGACCGTCAGGGTGTTTACAACGGCAGAGATAATTTATCGGAAAACAGTTATCGCATTGGTGTGTCATTTAAACTGTAG", + "dna_sequence_length": 717, + "functions": [ + "N-acetylnuraminic acid outer membrane channel protein" + ], + "id": "CDS_4230", + "location": [ + [ + "NC_000913", + 4539501, + "-", + 717 + ] + ], + "md5": "f2412e4ec23fa47ba66f417aee3e97b5", + "parent_gene": "", + "protein_md5": "6ceea571b6308d455ec3e91e2da74fc0", + "protein_translation": "MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014141" + ], + [ + "gene_synonym", + "ECK4303" + ], + [ + "gene_synonym", + "EcoGene:EG10309" + ], + [ + "gene_synonym", + "GI:16132133" + ], + [ + "gene_synonym", + "GeneID:948832" + ], + [ + "gene_synonym", + "JW4275" + ], + [ + "gene_synonym", + "NP_418732.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADH5" + ], + [ + "gene_synonym", + "b4312" + ], + [ + "gene_synonym", + "fimB" + ] + ], + "dna_sequence": "ATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAG", + "dna_sequence_length": 603, + "functions": [ + "tyrosine recombinase/inversion of on/off regulator of fimA" + ], + "id": "CDS_4231", + "location": [ + [ + "NC_000913", + 4540957, + "+", + 603 + ] + ], + "md5": "62eaaa4dd91863d9deef4cac6df5f29e", + "parent_gene": "", + "protein_md5": "ac29b31e68529aa4f19039cb9034502f", + "protein_translation": "MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014143" + ], + [ + "gene_synonym", + "ECK4304" + ], + [ + "gene_synonym", + "EcoGene:EG10312" + ], + [ + "gene_synonym", + "GI:16132134" + ], + [ + "gene_synonym", + "GeneID:948836" + ], + [ + "gene_synonym", + "JW4276" + ], + [ + "gene_synonym", + "NP_418733.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADH7" + ], + [ + "gene_synonym", + "b4313" + ], + [ + "gene_synonym", + "fimE" + ], + [ + "gene_synonym", + "hyp" + ] + ], + "dna_sequence": "GTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGA", + "dna_sequence_length": 597, + "functions": [ + "tyrosine recombinase/inversion of on/off regulator of fimA" + ], + "id": "CDS_4232", + "location": [ + [ + "NC_000913", + 4542037, + "+", + 597 + ] + ], + "md5": "fe4b6af04752d881972090ca004a5fcd", + "parent_gene": "", + "protein_md5": "5f53c8e2ef9a116dc761efc6d4905828", + "protein_translation": "MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV", + "protein_translation_length": 198, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014145" + ], + [ + "gene_synonym", + "ECK4305" + ], + [ + "gene_synonym", + "EcoGene:EG10308" + ], + [ + "gene_synonym", + "GI:16132135" + ], + [ + "gene_synonym", + "GeneID:948838" + ], + [ + "gene_synonym", + "JW4277" + ], + [ + "gene_synonym", + "NP_418734.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04128" + ], + [ + "gene_synonym", + "b4314" + ], + [ + "gene_synonym", + "fimA" + ], + [ + "gene_synonym", + "fimD" + ], + [ + "gene_synonym", + "pilA" + ] + ], + "dna_sequence": "ATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAGTTGTTAACGCCGCTTGCGCAGTTGATGCAGGCTCTGTTGATCAAACCGTTCAGTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAA", + "dna_sequence_length": 549, + "functions": [ + "major type 1 subunit fimbrin (pilin)" + ], + "id": "CDS_4233", + "location": [ + [ + "NC_000913", + 4543115, + "+", + 549 + ] + ], + "md5": "123648dd8a81fd15ca5d41ad004bc373", + "parent_gene": "", + "protein_md5": "a87ba622c92d55b1135e52f538af07f4", + "protein_translation": "MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQ", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014147" + ], + [ + "gene_synonym", + "ECK4306" + ], + [ + "gene_synonym", + "EcoGene:EG11974" + ], + [ + "gene_synonym", + "GI:90111729" + ], + [ + "gene_synonym", + "GeneID:948841" + ], + [ + "gene_synonym", + "JW5779" + ], + [ + "gene_synonym", + "NP_418735.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39264" + ], + [ + "gene_synonym", + "b4315" + ], + [ + "gene_synonym", + "fimI" + ] + ], + "dna_sequence": "ATGAAAAGGAAGAGATTATTTCTATTAGCGTCGTTGCTGCCAATGTTTGCTCTGGCCGGAAATAAATGGAATACCACGTTGCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGAAACTTGCCGGATTGAAGCCGGTGATAAACAAATGACGGTCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGTTGGGGAAGATAGCGCACCGGTGCCTTTTGTTATTCATTTACGGGAATGTAGCACGGTGGTGAGTGAACGTGTAGGTGTGGCGTTTCACGGTGTCGCGGATGGTAAAAATCCGGATGTGCTTTCCGTGGGAGAGGGGCCAGGGATAGCCACCAATATTGGCGTAGCGTTGTTTGATGATGAAGGAAACCTCGTACCGATTAATCGTCCTCCAGCAAACTGGAAACGGCTTTATTCAGGCTCTACTTCGCTACATTTCATCGCCAAATATCGTGCTACCGGGCGTCGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAA", + "dna_sequence_length": 540, + "functions": [ + "fimbrial protein involved in type 1 pilus biosynthesis" + ], + "id": "CDS_4234", + "location": [ + [ + "NC_000913", + 4543728, + "+", + 540 + ] + ], + "md5": "dcc9dadee7e4c123c8ed47a5b63e3af0", + "parent_gene": "", + "protein_md5": "5a22c55d20f18030e04191659a3fa13a", + "protein_translation": "MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014149" + ], + [ + "gene_synonym", + "ECK4307" + ], + [ + "gene_synonym", + "EcoGene:EG10310" + ], + [ + "gene_synonym", + "GI:49176488" + ], + [ + "gene_synonym", + "GeneID:948843" + ], + [ + "gene_synonym", + "JW4279" + ], + [ + "gene_synonym", + "NP_418736.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31697" + ], + [ + "gene_synonym", + "b4316" + ], + [ + "gene_synonym", + "fimC" + ] + ], + "dna_sequence": "GTGAGTAATAAAAACGTCAATGTAAGGAAATCGCAGGAAATAACATTCTGCTTGCTGGCAGGTATCCTGATGTTCATGGCAATGATGGTTGCCGGACGCGCTGAAGCGGGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCGGCAGGGCAAAAACAAGAGCAACTTGCCGTGACAAATAATGATGAAAATAGTACCTATTTAATTCAATCATGGGTGGAAAATGCCGATGGTGTAAAGGATGGTCGTTTTATCGTGACGCCTCCTCTGTTTGCGATGAAGGGAAAAAAAGAGAATACCTTACGTATTCTTGATGCAACAAATAACCAATTGCCACAGGACCGGGAAAGTTTATTCTGGATGAACGTTAAAGCGATTCCGTCAATGGATAAATCAAAATTGACTGAGAATACGCTACAGCTCGCAATTATCAGCCGCATTAAACTGTACTATCGCCCGGCTAAATTAGCGTTGCCACCCGATCAGGCCGCAGAAAAATTAAGATTTCGTCGTAGCGCGAATTCTCTGACGCTGATTAACCCGACACCCTATTACCTGACGGTAACAGAGTTGAATGCCGGAACCCGGGTTCTTGAAAATGCATTGGTGCCTCCAATGGGCGAAAGCACGGTTAAATTGCCTTCTGATGCAGGAAGCAATATTACTTACCGAACAATAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAA", + "dna_sequence_length": 726, + "functions": [ + "periplasmic chaperone" + ], + "id": "CDS_4235", + "location": [ + [ + "NC_000913", + 4544304, + "+", + 726 + ] + ], + "md5": "f2d5982b501804b50d74bd6ab421103b", + "parent_gene": "", + "protein_md5": "ad6b5829a385eacdc226d898b4537d04", + "protein_translation": "MSNKNVNVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014151" + ], + [ + "gene_synonym", + "ECK4308" + ], + [ + "gene_synonym", + "EcoGene:EG10311" + ], + [ + "gene_synonym", + "GI:16132138" + ], + [ + "gene_synonym", + "GeneID:948844" + ], + [ + "gene_synonym", + "JW5780" + ], + [ + "gene_synonym", + "NP_418737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30130" + ], + [ + "gene_synonym", + "b4317" + ], + [ + "gene_synonym", + "fimD" + ] + ], + "dna_sequence": "ATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATCGTTTGGCTGGTTTTTTTGTCCGACTCGTTGTCGCCTGTGCTTTTGCCGCACAGGCACCTTTGTCATCTGCCGACCTCTATTTTAATCCGCGCTTTTTAGCGGATGATCCCCAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTATCGCGTCGATATCTATTTGAATAATGGTTATATGGCAACGCGTGATGTCACATTTAATACGGGCGACAGTGAACAAGGGATTGTTCCCTGCCTGACACGCGCGCAACTCGCCAGTATGGGGCTGAATACGGCTTCTGTCGCCGGTATGAATCTGCTGGCGGATGATGCCTGTGTGCCATTAACCACAATGGTCCAGGACGCTACTGCGCATCTGGATGTTGGTCAGCAGCGACTGAACCTGACGATCCCTCAGGCATTTATGAGTAATCGCGCGCGTGGTTATATTCCTCCTGAGTTATGGGATCCCGGTATTAATGCCGGATTGCTCAATTATAATTTCAGCGGAAATAGTGTACAGAATCGGATTGGGGGTAACAGCCATTATGCATATTTAAACCTACAGAGTGGGTTAAATATTGGTGCGTGGCGTTTACGCGACAATACCACCTGGAGTTATAACAGTAGCGACAGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAATTGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACAAAATGGGTATGACATTTATAATAGTACGGTGCCACCGGGGCCTTTTACCATCAACGATATCTATGCCGCAGGTAATAGTGGTGACTTGCAGGTAACGATCAAAGAGGCTGACGGCAGCACGCAGATTTTTACCGTACCCTATTCGTCAGTCCCGCTTTTGCAACGTGAAGGGCATACTCGTTATTCCATTACGGCAGGAGAATACCGTAGTGGAAATGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAATATATGGTGGAACGCAACTGGCGGATCGTTATCGTGCTTTTAATTTCGGTATCGGGAAAAACATGGGGGCACTGGGCGCTCTGTCTGTGGATATGACGCAGGCTAATTCCACACTTCCCGATGACAGTCAGCATGACGGACAATCGGTGCGTTTTCTCTATAACAAATCGCTCAATGAATCAGGCACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAGCTATAGCCTGACGAAAAACGCCTGGCAAAAAGGACGGGATCAGATGTTAGCGCTTAACGTCAATATTCCTTTCAGCCACTGGCTGCGTTCTGACAGTAAATCTCAGTGGCGACATGCCAGTGCCAGCTACAGCATGTCACACGATCTCAACGGTCGGATGACCAATCTGGCTGGTGTATACGGTACGTTGCTGGAAGACAACAACCTCAGCTATAGCGTGCAAACCGGCTATGCCGGGGGAGGCGATGGAAATAGCGGAAGTACAGGCTACGCCACGCTGAATTATCGCGGTGGTTACGGCAATGCCAATATCGGTTACAGCCATAGCGATGATATTAAGCAGCTCTATTACGGAGTCAGCGGTGGGGTACTGGCTCATGCCAATGGCGTAACGCTGGGGCAGCCGTTAAACGATACGGTGGTGCTTGTTAAAGCGCCTGGCGCAAAAGATGCAAAAGTCGAAAACCAGACGGGGGTGCGTACCGACTGGCGTGGTTATGCCGTGCTGCCTTATGCCACTGAATATCGGGAAAATAGAGTGGCGCTGGATACCAATACCCTGGCTGATAACGTCGATTTAGATAACGCGGTTGCTAACGTTGTTCCCACTCGTGGGGCGATCGTGCGAGCAGAGTTTAAAGCGCGCGTTGGGATAAAACTGCTCATGACGCTGACCCACAATAATAAGCCGCTGCCGTTTGGGGCGATGGTGACATCAGAGAGTAGCCAGAGTAGCGGCATTGTTGCGGATAATGGTCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTGAATGTCGTTAA", + "dna_sequence_length": 2637, + "functions": [ + "fimbrial usher outer membrane porin protein", + "FimCD chaperone-usher" + ], + "id": "CDS_4236", + "location": [ + [ + "NC_000913", + 4545096, + "+", + 2637 + ] + ], + "md5": "1f2eec4854be749b46fa38ec283ec9a9", + "parent_gene": "", + "protein_md5": "a4f073c7cf200e3cb219ffacecd03226", + "protein_translation": "MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLVVACAFAAQAPLSSADLYFNPRFLADDPQAVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLNTASVAGMNLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDPGINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVLVKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLAGKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR", + "protein_translation_length": 878, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014153" + ], + [ + "gene_synonym", + "ECK4309" + ], + [ + "gene_synonym", + "EcoGene:EG10313" + ], + [ + "gene_synonym", + "GI:16132139" + ], + [ + "gene_synonym", + "GeneID:948845" + ], + [ + "gene_synonym", + "JW4281" + ], + [ + "gene_synonym", + "NP_418738.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08189" + ], + [ + "gene_synonym", + "b4318" + ], + [ + "gene_synonym", + "fimF" + ] + ], + "dna_sequence": "ATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAGTGTGGCCGCTGAATCAACCAATTTTACTGTTGATCTGATGGAAAACGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCACCCTGTGGTAATGCCGTTTCTGCCGTAAAGGTTGGGTTTACTGGCGTTGCAGATAGCCACAATGCCAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAA", + "dna_sequence_length": 531, + "functions": [ + "minor component of type 1 fimbriae" + ], + "id": "CDS_4237", + "location": [ + [ + "NC_000913", + 4547742, + "+", + 531 + ] + ], + "md5": "4d8f9fde3560885e4847ec3064e2ba30", + "parent_gene": "", + "protein_md5": "9a61cbd8e64ac2456e2eb2bd91990de7", + "protein_translation": "MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014155" + ], + [ + "gene_synonym", + "ECK4310" + ], + [ + "gene_synonym", + "EcoGene:EG10314" + ], + [ + "gene_synonym", + "GI:16132140" + ], + [ + "gene_synonym", + "GeneID:948846" + ], + [ + "gene_synonym", + "JW4282" + ], + [ + "gene_synonym", + "NP_418739.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08190" + ], + [ + "gene_synonym", + "b4319" + ], + [ + "gene_synonym", + "fimG" + ] + ], + "dna_sequence": "ATGAAATGGTGCAAACGTGGGTATGTATTGGCGGCAATATTGGCGCTCGCAAGTGCGACGATACAGGCAGCCGATGTCACCATCACGGTGAACGGTAAGGTCGTCGCCAAACCGTGTACGGTTTCCACCACCAATGCCACGGTTGATCTCGGCGATCTTTATTCTTTCAGTCTTATGTCTGCCGGGGCGGCATCGGCCTGGCATGATGTTGCGCTTGAGTTGACTAATTGTCCGGTGGGAACGTCGAGGGTCACTGCCAGCTTCAGCGGGGCAGCCGACAGTACCGGATATTATAAAAACCAGGGGACCGCGCAAAACATCCAGTTAGAGCTACAGGATGACAGTGGCAACACATTGAATACTGGCGCAACCAAAACAGTTCAGGTGGATGATTCCTCACAATCAGCGCACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTCAGGCAGTGATTAGCATCACCTATACCTACAGCTGA", + "dna_sequence_length": 504, + "functions": [ + "minor component of type 1 fimbriae" + ], + "id": "CDS_4238", + "location": [ + [ + "NC_000913", + 4548285, + "+", + 504 + ] + ], + "md5": "202faeb5277c6be77a630af3151f33b2", + "parent_gene": "", + "protein_md5": "766a916333e7ba72d6e03f5f8664f02f", + "protein_translation": "MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014157" + ], + [ + "gene_synonym", + "ECK4311" + ], + [ + "gene_synonym", + "EcoGene:EG10315" + ], + [ + "gene_synonym", + "GI:16132141" + ], + [ + "gene_synonym", + "GeneID:948847" + ], + [ + "gene_synonym", + "JW4283" + ], + [ + "gene_synonym", + "NP_418740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08191" + ], + [ + "gene_synonym", + "b4320" + ], + [ + "gene_synonym", + "fimH" + ] + ], + "dna_sequence": "ATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAACTATAACAGCGATGATTTCCAGTTTGTGTGGAATATTTACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAACTCGATTTTCACCAATACCGCGTCGTTTTCACCTGCACAGGGCGTCGGCGTACAGTTGACGCGCAACGGTACGATTATTCCAGCGAATAACACGGTATCGTTAGGAGCAGTAGGGACTTCGGCGGTGAGTCTGGGATTAACGGCAAATTATGCACGTACCGGAGGGCAGGTGACTGCAGGGAATGTGCAATCGATTATTGGCGTGACTTTTGTTTATCAATAA", + "dna_sequence_length": 903, + "functions": [ + "minor component of type 1 fimbriae" + ], + "id": "CDS_4239", + "location": [ + [ + "NC_000913", + 4548808, + "+", + 903 + ] + ], + "md5": "d0fa5f05fa0462af75b40408f15ddedb", + "parent_gene": "", + "protein_md5": "691149782f4c1dcda521773be39ce382", + "protein_translation": "MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014161" + ], + [ + "gene_synonym", + "ECK4312" + ], + [ + "gene_synonym", + "EcoGene:EG12563" + ], + [ + "gene_synonym", + "GI:16132142" + ], + [ + "gene_synonym", + "GeneID:948848" + ], + [ + "gene_synonym", + "JW4284" + ], + [ + "gene_synonym", + "NP_418741.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC94" + ], + [ + "gene_synonym", + "b4321" + ], + [ + "gene_synonym", + "gntP" + ], + [ + "gene_synonym", + "yjiB" + ] + ], + "dna_sequence": "ATGCATGTGCTTAACATTCTCTGGGTGGTATTCGGCATTGGTCTGATGCTGGTACTGAATTTGAAGTTCAAAATCAATTCAATGGTGGCTTTGTTGGTGGCGGCGCTGTCCGTCGGGATGCTGGCGGGCATGGATTTGATGTCGCTGCTGCACACTATGAAAGCGGGCTTCGGCAACACGCTGGGGGAACTGGCTATCATCGTGGTGTTCGGTGCGGTCATCGGTAAATTGATGGTCGACTCCGGCGCGGCTCACCAGATAGCGCATACGCTGCTGGCGCGTCTCGGTCTGCGCTATGTACAGCTGTCGGTGATTATCATCGGCCTGATTTTTGGTCTGGCGATGTTCTATGAAGTGGCCTTTATCATGTTAGCGCCGCTGGTTATTGTTATTGCCGCCGAAGCTAAAATTCCGTTCCTGAAACTGGCGATCCCGGCAGTAGCAGCTGCCACTACCGCACATTCACTGTTCCCACCGCAGCCGGGTCCGGTGGCGCTGGTGAATGCTTATGGCGCGGATATGGGGATGGTTTATATCTATGGCGTACTGGTGACGATCCCAAGTGTAATCTGCGCAGGTCTGATCCTGCCGAAGTTCCTCGGCAATCTTGAGCGCCCAACGCCATCATTCCTGAAAGCAGATCAACCGGTAGATATGAATAATCTGCCCTCTTTCGGCGTTTCGATTCTGGTGCCGCTGATCCCGGCGATCATTATGATCTCTACCACCATCGCCAATATCTGGCTGGTAAAAGATACCCCTGCCTGGGAAGTGGTTAACTTTATCGGTTCCTCGCCGATTGCAATGTTTATTGCGATGGTGGTTGCATTCGTACTCTTTGGCACCGCACGTGGTCATGACATGCAGTGGGTGATGAACGCTTTTGAAAGCGCGGTGAAGAGTATTGCAATGGTGATTCTGATCATCGGTGCGGGTGGCGTGCTGAAGCAGACCATCATCGACACCGGCATTGGCGACACCATCGGCATGTTGATGTCCCACGGCAATATCTCGCCCTACATCATGGCATGGCTGATCACTGTGCTAATTCGTCTGGCGACGGGTCAGGGTGTCGTTTCGGCGATGACCGCCGCCGGGATTATCAGTGCTGCAATCCTAGATCCAGCAACTGGTCAGCTGGTTGGCGTGAATCCGGCGCTGCTGGTACTGGCGACGGCTGCGGGTTCCAACACCCTCACCCACATTAACGATGCATCTTTCTGGTTGTTCAAAGGTTACTTTGACCTGTCAGTAAAAGACACGTTGAAAACCTGGGGTCTGCTGGAGCTGGTCAACTCCGTGGTTGGGCTGATTATTGTGCTGATTATTAGCATGGTAGCGTAA", + "dna_sequence_length": 1344, + "functions": [ + "fructuronate transporter" + ], + "id": "CDS_4240", + "location": [ + [ + "NC_000913", + 4551296, + "-", + 1344 + ] + ], + "md5": "744f469ab0d023c1618662dbbd0a1618", + "parent_gene": "", + "protein_md5": "37684d301977c26fff05b379b229dcdd", + "protein_translation": "MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVAFIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMISTTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVSAMTAAGIISAAILDPATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKDTLKTWGLLELVNSVVGLIIVLIISMVA", + "protein_translation_length": 447, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014173" + ], + [ + "gene_synonym", + "ECK4313" + ], + [ + "gene_synonym", + "EcoGene:EG11066" + ], + [ + "gene_synonym", + "GI:16132143" + ], + [ + "gene_synonym", + "GeneID:947082" + ], + [ + "gene_synonym", + "JW4285" + ], + [ + "gene_synonym", + "NP_418742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24215" + ], + [ + "gene_synonym", + "b4322" + ], + [ + "gene_synonym", + "uxuA" + ] + ], + "dna_sequence": "ATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAGGCGGGCGCAACTGGCGTGGTTACCGCGCTGCACCATATCCCGAACGGCGAAGTATGGTCCGTTGAAGAGATCCTCAAACGCAAGGCGATCATTGAAGACGCAGGCCTGGTGTGGTCTGTCGTAGAAAGCGTGCCAATTCACGAAGATATCAAAACCCACACTGGCAACTATGAGCAGTGGATCGCTAACTATCAGCAGACTCTGCGCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATGGCTGTTCACCCGGACGATCCGCCGCGCCCGATCCTCGGCCTGCCGCGCATTGTTTCCACCATTGAAGATATGCAGTGGATGGTTGATACCGTAAACAGCATGGCAAACGGTTTTACCATGTGCACCGGTTCCTACGGCGTGCGTGCTGACAACGATCTGGTTGATATGATCAAGCAGTTCGGTCCGCGTATTTACTTCACCCATCTGCGCTCCACCATGCGTGAAGATAACCCGAAAACCTTCCACGAAGCGGCGCACCTGAACGGTGACGTTGATATGTACGAAGTGGTGAAAGCGATTGTTGAAGAAGAACACCGTCGTAAAGCGGAAGGCAAAGAAGACCTGATCCCGATGCGTCCGGACCACGGTCATCAGATGCTGGACGACCTGAAGAAGAAAACCAACCCAGGTTACTCCGCAATTGGTCGTCTGAAAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAA", + "dna_sequence_length": 1185, + "functions": [ + "mannonate hydrolase" + ], + "id": "CDS_4241", + "location": [ + [ + "NC_000913", + 4551636, + "+", + 1185 + ] + ], + "md5": "ca775205ee8b5c265b07ddd44a2b50c8", + "parent_gene": "", + "protein_md5": "08db55e41db71bce9bf1770750acbb97", + "protein_translation": "MEQTWRWYGPNDPVSLADVRQAGATGVVTALHHIPNGEVWSVEEILKRKAIIEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAERFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFFSR", + "protein_translation_length": 394, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014175" + ], + [ + "gene_synonym", + "ECK4314" + ], + [ + "gene_synonym", + "EcoGene:EG20248" + ], + [ + "gene_synonym", + "GI:16132144" + ], + [ + "gene_synonym", + "GeneID:946795" + ], + [ + "gene_synonym", + "JW4286" + ], + [ + "gene_synonym", + "NP_418743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39160" + ], + [ + "gene_synonym", + "b4323" + ], + [ + "gene_synonym", + "uxuB" + ] + ], + "dna_sequence": "ATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGGTTGCGGGGCGTTTCACCGCGCGCACCAGGCGCTGTATACCCATCATCTGCTGGAAAGCACCGACAGCGACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCAACGACCGCGTGCTGATCGAAAACCTGAAAAAACAGCAACTGCTGTACACCGTAGCGGAAAAAGGCGCAGAGAGCACCGAGCTGAAAATTATCGGTTCGATGAAAGAAGCGCTGCATCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTGCGTGAAAACGGTCATGTGGCGAAGGTCGCGGTACTGGGGCTGGCTCAGGCGCGTGACCCGCAGCTGGCGGCATGGATTGAAGAAAATGTCACCTTCCCGTGCACCATGGTTGACCGCATCGTTCCGGCGGCGACGCCAGAAACCTTACAGGAAATTGCTGACCAGCTGGGTGTTTACGACCCGTGCGCCATTGCCTGCGAACCGTTCCGTCAGTGGGTGATTGAAGATAACTTCGTTAATGGTCGCCCGGATTGGGATAAAGTGGGCGCACAGTTCGTTGCAGACGTTGTGCCGTTCGAAATGATGAAGCTGCGTATGCTGAACGGCAGCCACTCTTTTCTGGCGTACCTCGGTTACCTCGGCGGCTATGAAACCATTGCCGACACCGTGACTAACCCGGCTTATCGCAAAGCGGCCTTTGCCCTGATGATGCAGGAACAAGCGCCAACGCTGTCGATGCCGGAAGGTACAGACCTGAACGCCTATGCGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGTGGATGAGCAGGGTAATGCCATTGACGTGGTCGACCCGATGCTGGCGGAGTTCCAGAAGATCAACGCGCAGTATCAGGGCGCAGACCGCGTGAAAGCGCTGCTGGGCCTGAGCGGTATTTTTGCCGATGATCTGCCGCAGAATGCCGACTTTGTTGGCGCAGTGACGGCGGCATATCAGCAGCTGTGCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAA", + "dna_sequence_length": 1461, + "functions": [ + "D-mannonate oxidoreductase, NAD-dependent" + ], + "id": "CDS_4242", + "location": [ + [ + "NC_000913", + 4552901, + "+", + 1461 + ] + ], + "md5": "79861ada9242cc069a783dc70720eccf", + "parent_gene": "", + "protein_md5": "583cedfa52cd2ff7dbff6fdfb9eb5d36", + "protein_translation": "MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTVTNPAYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL", + "protein_translation_length": 486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014179" + ], + [ + "gene_synonym", + "ECK4315" + ], + [ + "gene_synonym", + "EcoGene:EG20249" + ], + [ + "gene_synonym", + "GI:16132145" + ], + [ + "gene_synonym", + "GeneID:948849" + ], + [ + "gene_synonym", + "JW4287" + ], + [ + "gene_synonym", + "NP_418744.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39161" + ], + [ + "gene_synonym", + "b4324" + ], + [ + "gene_synonym", + "uxuR" + ] + ], + "dna_sequence": "ATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCTGATCATAAAGACGCCGTACAATCCTGGCGAACGGCTGCCGCCGGAGCGTGAAATTGCAGAAATGCTTGATGTCACGCGGACGGTGGTACGTGAAGCGCTGATCATGCTGGAGATCAAAGGGCTGGTGGAAGTACGCCGGGGTGCCGGTATCTATGTTCTTGATAACTCAGGCAGCCAGAACACAGACAGTCCGGATGCCAACGTCTGCAACGATGCCGGTCCTTTTGAGCTGTTACAGGCGCGGCAGTTATTGGAGAGCAACATCGCCGAGTTTGCCGCTTTGCAGGCTACCCGCGAAGATATCGTCAAAATGCGTCAGGCATTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACGTTAAGCAACGTCTGCTGGAATTCTCGAACGTTGACGATATTTATTTTGATGGCTATCTGTTTGATTCATGGCCGCTGGATAAAGTCGACGCCTGA", + "dna_sequence_length": 774, + "functions": [ + "fructuronate-inducible hexuronate regulon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_4243", + "location": [ + [ + "NC_000913", + 4554576, + "+", + 774 + ] + ], + "md5": "b6570e143c294777159a7a517724ce56", + "parent_gene": "", + "protein_md5": "70486e9a70fd07afad407569bd60334b", + "protein_translation": "MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDNSGSQNTDSPDANVCNDAGPFELLQARQLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014181" + ], + [ + "gene_synonym", + "ECK4316" + ], + [ + "gene_synonym", + "EcoGene:EG12564" + ], + [ + "gene_synonym", + "GI:49176489" + ], + [ + "gene_synonym", + "GeneID:948850" + ], + [ + "gene_synonym", + "JW4288" + ], + [ + "gene_synonym", + "NP_418745.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39374" + ], + [ + "gene_synonym", + "b4325" + ], + [ + "gene_synonym", + "yjiC" + ] + ], + "dna_sequence": "ATGTCTATGCCATTAAGCAATGCCCTTCAGAGTCAAATTATTACAGATGCTCACTTCCTTCATCACCCAATAGTCGACAGTGAGTTTACACGTAAATTAAAATATGCACGCATGGATTCGGAAAACATCTATCTTCCGCCTCTTACTCGTGGCAATAACCATAATTACGATGGAAAAAGCGTTGTCGAAATTAGAAAACTTGATATTAGTAAAGAGCCTTGGCCATTTAATTATGTGACAGGAGCATGCAGAGAATCCGATGGTATTACAACAACAGGACGTATGCTCTATCGGAACTTGAAAATCACCTCAGCTTTAGACGAAATATATGGTGGCATATGTAAAAAGGCGCATGCTACCACAGAGTTAGCAGAAGGTTTACGGCTAAATTTATTTATGAAGAGCCCTTTCGATCCTGTTGAGGACTATACAGTTCATGAAATAACATTAGGCCCTGGTTGCAATGTTCCTGGTTATGCCGGAACCACGATAGGATATATTTCAACCCTTCCAGCTTCTCAGGCAAAAAGATGGACCAATGAGCAGCCAAGGATTGATATCTATATTGATCAGATAATGACGGTAACAGGGGTAGCAAATTCTTCCGGATTCGCCCTTGCCGCATTACTTAATGCTAATATTGAGTTGGGTAATGACCCAATAATTGGTATAGAAGCCTATCCCGGTACCGCGGAGATCCATGCAAAAATGGGATATAAAGTTATCCCGGGTGATGAAAATGCACCACTCAAACGTATGACTCTGCAACCGTCATCTCTTCCAGAACTGTTTGAATTAAAAAATGGTGAATGGAATTATATTGGTAAATAA", + "dna_sequence_length": 831, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4244", + "location": [ + [ + "NC_000913", + 4556320, + "-", + 831 + ] + ], + "md5": "9d895fd409529ded0edff7ed374dee53", + "parent_gene": "", + "protein_md5": "4a4a9858a78f783092c7cb465f0d5647", + "protein_translation": "MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014190" + ], + [ + "gene_synonym", + "ECK4317" + ], + [ + "gene_synonym", + "EcoGene:EG12565" + ], + [ + "gene_synonym", + "GI:90111730" + ], + [ + "gene_synonym", + "GeneID:948851" + ], + [ + "gene_synonym", + "JW5782" + ], + [ + "gene_synonym", + "NP_418746.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39375" + ], + [ + "gene_synonym", + "b4326" + ], + [ + "gene_synonym", + "iraD" + ], + [ + "gene_synonym", + "yjiD" + ] + ], + "dna_sequence": "ATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCACTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATAATGCTGTACCACGACGATGAACCGCTAACGTTTGATCTGGTCTGGGATAATGGCGGTTGGCGCAGTGCGACGCTGGAGAATGTCAGCTAA", + "dna_sequence_length": 393, + "functions": [ + "RpoS stabilzer after DNA damage, anti-RssB factor" + ], + "id": "CDS_4245", + "location": [ + [ + "NC_000913", + 4556993, + "+", + 393 + ] + ], + "md5": "d56fa53c9f0431c3d2e8cc025a4cc1c6", + "parent_gene": "", + "protein_md5": "46adb93bf2840c4b0352ea3c5ee7bd3d", + "protein_translation": "MMRQSLQAVLPEISGNKTSSLRKSVCSDLLTLFNSPHSALPSLLVSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIMLYHDDEPLTFDLVWDNGGWRSATLENVS", + "protein_translation_length": 130, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014192" + ], + [ + "gene_synonym", + "ECK4318" + ], + [ + "gene_synonym", + "EcoGene:EG12566" + ], + [ + "gene_synonym", + "GI:16132148" + ], + [ + "gene_synonym", + "GeneID:948852" + ], + [ + "gene_synonym", + "JW4290" + ], + [ + "gene_synonym", + "NP_418747.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39376" + ], + [ + "gene_synonym", + "b4327" + ], + [ + "gene_synonym", + "hypT" + ], + [ + "gene_synonym", + "qseD" + ], + [ + "gene_synonym", + "yjiE" + ] + ], + "dna_sequence": "ATGGATGACTGTGGTGCGATTTTGCATAATATTGAAACCAAATGGCTTTATGATTTTCTGACCCTGGAAAAATGCCGCAATTTTTCCCAGGCGGCAGTCAGTCGCAACGTCTCGCAACCGGCATTCAGCCGCCGCATCCGTGCGCTGGAACAGGCGATTGGTGTTGAATTGTTTAACCGCCAGGTAACGCCGCTGCAACTCTCAGAACAAGGGAAAATCTTCCATTCGCAGATCCGCCATCTGTTGCAACAGTTAGAGAGCAATCTGGCAGAGCTGCGTGGCGGCAGCGATTACGCGCAACGAAAAATCAAGATAGCCGCTGCACACTCTCTTTCCCTCGGGCTGTTACCGTCCATTATCAGCCAGATGCCGCCGCTCTTTACCTGGGCAATTGAAGCTATTGATGTCGATGAAGCGGTCGATAAACTGCGTGAAGGGCAAAGTGACTGTATTTTTTCCTTTCACGACGAAGATTTGCTGGAAGCGCCGTTTGACCACATTCGCTTATTTGAATCTCAATTGTTCCCTGTCTGCGCCAGTGACGAACACGGAGAAGCACTTTTTAACCTCGCGCAGCCACACTTTCCGTTACTGAATTACAGCCGCAACTCCTACATGGGGCGATTGATTAATCGCACCCTGACGCGCCACAGTGAGTTAAGTTTCAGCACCTTTTTTGTCTCTTCGATGAGCGAGCTTTTAAAGCAGGTTGCCCTCGACGGCTGTGGGATTGCCTGGCTGCCGGAGTACGCCATCCAACAAGAAATTCGCAGCGGGAAGCTCGTTGTACTGAATCGGGACGAACTGGTGATCCCGATTCAGGCCTATGCATACCGGATGAATACCCGCATGAATCCCGTTGCCGAACGCTTCTGGCGTGAACTGCGCGAGCTGGAGATTGTGCTTAGCTGA", + "dna_sequence_length": 912, + "functions": [ + "hypochlorite-responsive transcription factor" + ], + "id": "CDS_4246", + "location": [ + [ + "NC_000913", + 4558289, + "-", + 912 + ] + ], + "md5": "c439705a91d3ef93f1dd27aff1725f09", + "parent_gene": "", + "protein_md5": "b8d130ea5458a3d86d9e345c7a3aba6e", + "protein_translation": "MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEIVLS", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014195" + ], + [ + "gene_synonym", + "ECK4319" + ], + [ + "gene_synonym", + "EcoGene:EG12567" + ], + [ + "gene_synonym", + "GI:16132149" + ], + [ + "gene_synonym", + "GeneID:948853" + ], + [ + "gene_synonym", + "JW4291" + ], + [ + "gene_synonym", + "NP_418748.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39377" + ], + [ + "gene_synonym", + "b4328" + ], + [ + "gene_synonym", + "iadA" + ], + [ + "gene_synonym", + "yjiF" + ] + ], + "dna_sequence": "ATGATTGATTATACCGCAGCCGGTTTTACCCTGCTGCAGGGAGCGCATTTGTATGCGCCGGAAGATCGGGGAATTTGCGATGTCCTCGTCGCTAACGGCAAAATTATCGCCGTTGCCAGCAATATCCCTTCTGACATTGTACCGAACTGCACGGTTGTCGATCTCAGTGGGCAGATCCTCTGCCCAGGTTTTATTGATCAACACGTCCATTTGATTGGCGGTGGCGGCGAAGCAGGTCCCACGACGCGCACGCCGGAAGTGGCGCTAAGTCGCCTGACGGAAGCGGGCGTCACGTCAGTGGTTGGTCTGCTGGGCACCGACTCTATCTCTCGCCACCCGGAATCCCTGCTCGCCAAGACCCGTGCGCTCAATGAAGAAGGCATCAGCGCCTGGATGCTGACCGGCGCTTATCATGTCCCTTCCCGCACCATTACGGGTTCCGTGGAAAAAGACGTGGCGATTATCGATCGTGTGATTGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAATCCCGCGTTGGCGGTTTGCTCGGCGGTAAACCTGGCGTCACCGTGTTCCACATGGGCGACAGTAAAAAGGCGTTACAGCCTATTTATGACCTGCTGGAAAACTGCGATGTGCCGATCAGCAAGCTGCTGCCGACCCACGTTAACCGCAACGTACCGTTGTTTGAGCAGGCGCTGGAGTTCGCGCGCAAAGGCGGCACCATCGATATCACCAGCAGCATTGACGAACCGGTCGCCCCTGCCGAAGGTATTGCCCGCGCCGTTCAGGCGGGTATTCCGCTGGCACGCGTCACCCTCAGCTCCGACGGCAACGGTAGCCAGCCGTTCTTCGATGACGAAGGGAATTTAACCCATATCGGTGTTGCCGGTTTTGAAACGTTGCTGGAAACCGTGCAGGTGCTGGTCAAAGACTATGATTTCAGTATCAGCGATGCCCTGCGCCCGCTCACCAGTAGCGTAGCCGGTTTCCTTAACCTGACCGGGAAAGGCGAAATTCTGCCAGGCAATGATGCTGACTTGCTGGTCATGACGCCAGAACTGCGCATTGAGCAGGTATACGCTCGCGGCAAACTGATGGTCAAAGACGGCAAAGCCTGCGTGAAAGGAACGTTTGAAACGGCTTAA", + "dna_sequence_length": 1173, + "functions": [ + "isoaspartyl dipeptidase" + ], + "id": "CDS_4247", + "location": [ + [ + "NC_000913", + 4559526, + "-", + 1173 + ] + ], + "md5": "461bb15350527201baeb76717acc7a32", + "parent_gene": "", + "protein_md5": "b90310beaf7909b476c06d6a413d2b8f", + "protein_translation": "MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA", + "protein_translation_length": 390, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014197" + ], + [ + "gene_synonym", + "ECK4320" + ], + [ + "gene_synonym", + "EcoGene:EG12568" + ], + [ + "gene_synonym", + "GI:16132150" + ], + [ + "gene_synonym", + "GeneID:948854" + ], + [ + "gene_synonym", + "JW4292" + ], + [ + "gene_synonym", + "NP_418749.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEH8" + ], + [ + "gene_synonym", + "b4329" + ], + [ + "gene_synonym", + "yjiG" + ] + ], + "dna_sequence": "ATGACAACTCAGGTCCGCAAAAACGTCATGGATATGTTTATCGATGGCGCGCGCCGTGGCTTTACTATCGCCACGACCAACCTGCTGCCAAACGTGGTGATGGCGTTTGTCATCATTCAGGCGCTGAAAATTACCGGCCTGCTCGACTGGGTGGGGCATATCTGTGAACCCGTAATGGCGCTGTGGGGATTACCCGGTGAAGCGGCAACCGTCCTTTTAGCCGCATTAATGAGTATGGGTGGCGCAGTCGGTGTTGCCGCCAGTCTGGCAACCGCTGGCGCATTAACCGGTCACGATGTCACCGTTTTACTGCCCGCGATGTATTTAATGGGCAACCCGGTGCAAAATGTCGGTCGCTGCCTGGGGACAGCCGAAGTGAATGCCAAATATTACCCGCATATCATTACGGTCTGCGTGATTAACGCATTGCTGTCGATCTGGGTTATGCAGCTTATTGTTTAA", + "dna_sequence_length": 462, + "functions": [ + "SpmB family inner membrane protein" + ], + "id": "CDS_4248", + "location": [ + [ + "NC_000913", + 4560000, + "-", + 462 + ] + ], + "md5": "abcac1155d53a58bdc5abe50fb236049", + "parent_gene": "", + "protein_md5": "7cbd5b2fcab772bec69158cce8668da0", + "protein_translation": "MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTVLLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014201" + ], + [ + "gene_synonym", + "ECK4321" + ], + [ + "gene_synonym", + "EcoGene:EG12569" + ], + [ + "gene_synonym", + "GI:90111731" + ], + [ + "gene_synonym", + "GeneID:948856" + ], + [ + "gene_synonym", + "JW5783" + ], + [ + "gene_synonym", + "NP_418750.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39379" + ], + [ + "gene_synonym", + "b4330" + ], + [ + "gene_synonym", + "yjiH" + ] + ], + "dna_sequence": "ATGACACAACAAGGGGATGCTGTAGCCGGGGAGCTGGCGACAGAAAAAGTGGGCATTAAAGGGTATCTGGCCTTTTTTCTCACCATAATCTTTTTTTCCGGTGTTTTTTCCGGAACAGACAGCTGGTGGCGCGTTTTTGATTTTTCCGTTCTGAACGGATCGTTTGGGCAACTGCCTGGTGCGAACGGAGCCACCACCTCATTTCGCGGCGCGGGTGGCGCGGGGGCTAAAGATGGCTTTCTCTTTGCGCTGGAGCTGGCACCGTCAGTCATTCTCTCTCTGGGGATTATTTCAATTACCGATGGTCTTGGTGGATTACGCGCCGCGCAGCAGTTAATGACACCTGTGCTAAAACCGTTGTTGGGCATTCCAGGGATCTGCTCGCTGGCGCTGATCGCTAACCTGCAAAACACCGATGCCGCCGCCGGTATGACCAAAGAGCTGGCGCAGGAAGGTGAAATTACCGAACGCGATAAAGTGATTTTCGCCGCATATCAAACCAGCGGTAGCGCCATCATCACCAACTACTTCTCTTCCGGCGTCGCGGTGTTTGCCTTTCTGGGCACGTCCGTAATCGTACCTTTAGCCGTCATCCTGGTGTTTAAATTTGTCGGAGCCAACATTTTGCGCGTCTGGCTTAACTTCGAAGAACGTCGCAACCCAACGCAAGGAGCGCAAGCATGA", + "dna_sequence_length": 684, + "functions": [ + "nucleoside recognition pore and gate family putative inner membrane transporter" + ], + "id": "CDS_4249", + "location": [ + [ + "NC_000913", + 4560680, + "-", + 684 + ] + ], + "md5": "f5a804e54fb01389ae108344eda682f8", + "parent_gene": "", + "protein_md5": "e1be2efdebafdb2189690c233440a7a5", + "protein_translation": "MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA", + "protein_translation_length": 227, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014204" + ], + [ + "gene_synonym", + "ECK4322" + ], + [ + "gene_synonym", + "EcoGene:EG12570" + ], + [ + "gene_synonym", + "GI:90111732" + ], + [ + "gene_synonym", + "GeneID:948858" + ], + [ + "gene_synonym", + "JW5784" + ], + [ + "gene_synonym", + "NP_418751.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39380" + ], + [ + "gene_synonym", + "b4331" + ], + [ + "gene_synonym", + "kptA" + ], + [ + "gene_synonym", + "yjiI" + ] + ], + "dna_sequence": "ATGGCAAAGTACAACGAAAAAGAGCTGGCGGATACGAGCAAGTTTTTAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCCGTGCATTGCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAACACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAA", + "dna_sequence_length": 555, + "functions": [ + "RNA 2'-phosphotransferase" + ], + "id": "CDS_4250", + "location": [ + [ + "NC_000913", + 4560930, + "+", + 555 + ] + ], + "md5": "7df9a1d5956328934f17cd003d968eed", + "parent_gene": "", + "protein_md5": "cd431a6774e50be4d63663c4e48ab017", + "protein_translation": "MAKYNEKELADTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDTVVATSDKKRFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGLIAGERHYVHLSADEATARKVGARHGSPVILTVKAQEMAKRGLPFWQAENGVWLTSTVAVEFLEW", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014206" + ], + [ + "gene_synonym", + "ECK4323" + ], + [ + "gene_synonym", + "EcoGene:EG12571" + ], + [ + "gene_synonym", + "GI:16132153" + ], + [ + "gene_synonym", + "GeneID:948859" + ], + [ + "gene_synonym", + "JW4295" + ], + [ + "gene_synonym", + "NP_418752.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39381" + ], + [ + "gene_synonym", + "b4332" + ], + [ + "gene_synonym", + "yjiJ" + ] + ], + "dna_sequence": "ATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCTGGTTCTGACCTTAGGTATGGGTTTAGGCCGCTTCCTTTATACGCCTATGTTGCCCGTCATGATGGCGGAAGGATCGTTTTCATTTAGCCAGCTCTCGTGGATTGCCAGCGGCAACTATGCGGGGTATCTGGCTGGCAGTCTGCTATTTTCTTTTGGCGCATTTCACCAGCCATCGCGCCTGCGCCCATTTCTGTTGGCTTCTGCCCTGGCGAGCGGGTTGTTGATCCTCGCAATGGCATGGTTGCCGCCATTTATTCTGGTGTTATTGATTCGCGTCCTGGCGGGTGTCGCCAGCGCCGGTATGCTGATTTTTGGTTCGACGCTGATTATGCAGCACACGCGCCATCCTTTTGTGCTGGCAGCTTTGTTTTCTGGCGTTGGCATTGGCATCGCACTGGGCAATGAATATGTTCTGGCAGGCCTGCATTTTGACCTCTCCTCGCAAACGTTATGGCAAGGCGCCGGGGCGCTTTCTGGCATGATGCTGATTGCACTTACGCTTTTAATGCCCTCGAAAAAACACGCCATCACACCAATGCCATTGGCAAAAACGGAGCAACAGATAATGAGCTGGTGGTTACTGGCTATTCTGTACGGCCTGGCGGGATTTGGTTATATCATCGTCGCGACTTACCTGCCGCTCATGGCGAAAGATGCAGGCTCACCATTGTTAACCGCCCATCTCTGGACGTTAGTCGGCTTATCAATTGTGCCTGGTTGCTTTGGCTGGCTATGGGCAGCAAAACGTTGGGGGGCTTTGCCCTGCCTGACGGCGAATTTGCTGGTGCAGGCTATCTGTGTGCTGCTTACTCTCGCCAGCGACTCGCCTCTCTTGCTTATCATCAGCAGTCTTGGTTTTGGCGGTACCTTTATGGGCACGACATCTCTGGTGATGACTATCGCCCGCCAACTGAGCGTACCGGGAAATCTCAATCTTTTAGGCTTTGTGACGCTCATTTACGGCATTGGGCAAATCCTCGGCCCGGCGCTGACCAGTATGCTCAGCAATGGAACATCGGCGCTTGCCAGCGCCACTCTCTGCGGCGCGGCGGCGTTGTTTATTGCTGCGCTTATCAGCACAGTGCAATTATTTAAGCTACAAGTGGTCACTTCATGA", + "dna_sequence_length": 1179, + "functions": [ + "DUF1228 family putative inner membrane MFS superfamily transporter" + ], + "id": "CDS_4251", + "location": [ + [ + "NC_000913", + 4562675, + "-", + 1179 + ] + ], + "md5": "b4ca4c5db3b157d2f65441b1a2462d6d", + "parent_gene": "", + "protein_md5": "d31c9143ebdd32ac28ad77d7cbc7a6f7", + "protein_translation": "MPSSTHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVMMAEGSFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLASALASGLLILAMAWLPPFILVLLIRVLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIGIALGNEYVLAGLHFDLSSQTLWQGAGALSGMMLIALTLLMPSKKHAITPMPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLTANLLVQAICVLLTLASDSPLLLIISSLGFGGTFMGTTSLVMTIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLSNGTSALASATLCGAAALFIAALISTVQLFKLQVVTS", + "protein_translation_length": 392, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014209" + ], + [ + "gene_synonym", + "ECK4324" + ], + [ + "gene_synonym", + "EcoGene:EG12572" + ], + [ + "gene_synonym", + "GI:145698345" + ], + [ + "gene_synonym", + "GeneID:948957" + ], + [ + "gene_synonym", + "JW5869" + ], + [ + "gene_synonym", + "NP_418753.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39382" + ], + [ + "gene_synonym", + "b4333" + ], + [ + "gene_synonym", + "yjiK" + ] + ], + "dna_sequence": "GTGACAAAAAGTATTTCGTTAAGTAAACGCATCTCCATTATTGTGATTCTTTTTGCCATTGTGGCAGTGTGTACTTTCTTCGTGCAATCTTGCGCCCGTAAAAGCAATCATGCAGCATCATTTCAGAATTACCACGCCACCATTGACGGCAAAGAAATTGCAGGCATAACGAATAATATCTCTTCGCTGACCTGGTCGGCACAAAGCAATACTCTTTTTAGCACTATCAACAAACCTGCCGCCATTGTTGAAATGACCACCAATGGTGATTTTATCCGCACAATTCCTCTGGATTTTGTTAAGGATCTCGAGACGATCGAATACATTGGCGATAATCAGTTTGTCATTAGCGATGAGCGCGATTACGCCATTTATGTGATTTCACTGACCCCAAACTCGGAAGTAAAAATCCTCAAAAAAATAAAAATCCCGCTGCAAGACTCCCCAACCAATTGCGGTTTTGAAGGGTTGGCTTATTCTCGCCAGGATCACACTTTCTGGTTTTTTAAAGAGAAAAATCCGATTGAGGTCTACAAAGTTAACGGGCTGTTAAGTAGCAATGAATTACACATCAGCAAAGACGAGGCACTACAACGGCAATTTACTTTAGATGATGTGTCCGGCGCAGAATTTAACCAGCAAAAAAATACGCTTCTGGTGCTGTCTCATGAATCTCGCGCACTCCAGGAAGTAACCCTGGTTGGCGAGGTTATCGGTGAAATGTCACTAACCAAAGGCAGTCGAGGTTTGTCGCATAACATCAAACAGGCCGAAGGGGTTGCGATGGATGCCTCTGGTAATATTTATATCGTTAGCGAACCAAATCGTTTTTATCGCTTTACCCCTCAATCATCGCATTAA", + "dna_sequence_length": 861, + "functions": [ + "SdiA-regulated family putative membrane-anchored protein", + "putative phytase-like esterase" + ], + "id": "CDS_4252", + "location": [ + [ + "NC_000913", + 4563603, + "-", + 861 + ] + ], + "md5": "fde2766f4e54874ca68470cd1c4a69d4", + "parent_gene": "", + "protein_md5": "6d7340cc0d17d974210636b1af7004d3", + "protein_translation": "MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014212" + ], + [ + "gene_synonym", + "ECK4325" + ], + [ + "gene_synonym", + "EcoGene:EG12573" + ], + [ + "gene_synonym", + "GI:90111734" + ], + [ + "gene_synonym", + "GeneID:948837" + ], + [ + "gene_synonym", + "JW5785" + ], + [ + "gene_synonym", + "NP_418754.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39383" + ], + [ + "gene_synonym", + "b4334" + ], + [ + "gene_synonym", + "yjiL" + ] + ], + "dna_sequence": "GTGGCATATTCGATTGGCATTGATTCCGGCTCAACCGCCACCAAAGGGATCTTACTGGCAGACGGCGTGATTACGCGCCGTTTCCTCGTTCCAACCCCCTTTCGCCCGGCAACAGCAATTACTGAAGCCTGGGAAACTCTGCGCGAAGGGTTAGAGACAACGCCGTTTCTGACGCTCACCGGCTACGGGCGGCAACTGGTGGATTTTGCCGATAAACAGGTAACGGAAATCTCCTGTCACGGGCTGGGCGCACGGTTTCTTGCGCCAGCAACGCGCGCGGTAATCGACATCGGTGGTCAGGACAGCAAAGTGATTCAGCTTGATGATGACGGTAACCTGTGCGATTTCCTGATGAATGACAAATGCGCGGCGGGCACCGGGCGTTTCCTGGAGGTGATCTCGCGCACGCTTGGCACCAGCGTCGAGCAACTCGACAGCATTACCGAAAATGTCACGCCGCACGCCATCACGAGTATGTGCACAGTGTTTGCTGAATCAGAAGCGATCAGCCTGCGCTCAGCGGGCGTCGCGCCAGAAGCGATTCTCGCAGGAGTGATTAACGCGATGGCGCGGAGGAGTGCCAATTTCATTGCTCGTCTCTCCTGTGAAGCGCCGATTCTGTTTACTGGTGGCGTTAGTCATTGCCAGAAGTTTGCCCGGATGCTGGAATCTCACCTGCGAATGCCGGTAAATACCCATCCTGATGCGCAATTTGCTGGCGCAATTGGCGCGGCGGTAATTGGTCAACGAGTGAGGACACGCCGATGA", + "dna_sequence_length": 768, + "functions": [ + "putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase" + ], + "id": "CDS_4253", + "location": [ + [ + "NC_000913", + 4564689, + "-", + 768 + ] + ], + "md5": "cbde51231545aee1cbaadbb750df1097", + "parent_gene": "", + "protein_md5": "559d4e2d107e812e6db53ee5018b3516", + "protein_translation": "MAYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLTGYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMCTVFAESEAISLRSAGVAPEAILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQKFARMLESHLRMPVNTHPDAQFAGAIGAAVIGQRVRTRR", + "protein_translation_length": 255, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014214" + ], + [ + "gene_synonym", + "ECK4326" + ], + [ + "gene_synonym", + "EcoGene:EG12574" + ], + [ + "gene_synonym", + "GI:90111735" + ], + [ + "gene_synonym", + "GeneID:945789" + ], + [ + "gene_synonym", + "JW5786" + ], + [ + "gene_synonym", + "NP_418755.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39384" + ], + [ + "gene_synonym", + "b4335" + ], + [ + "gene_synonym", + "yjiM" + ] + ], + "dna_sequence": "ATGTCACTTGTCACCGATCTACCCGCCATTTTCGATCAGTTCTCTGAAGCTCGCCAGACAGGCTTTCTCACCGTCATGGATCTCAAGGAGCGCGGCATTCCGCTGGTTGGCACTTACTGCACCTTTATGCCGCAAGAGATCCCGATGGCAGCCGGTGCGGTTGTGGTTTCGCTCTGTTCCACCTCTGATGAAACCATTGAAGAAGCGGAGAAAGATCTGCCGCGCAACCTCTGCCCGCTGATTAAAAGCAGCTACGGCTTCGGCAAAACCGATAAATGCCCCTACTTCTACTTTTCGGATCTGGTGGTCGGTGAAACCACCTGCGACGGCAAAAAGAAAATGTATGAATACATGGCGGAGTTTAAGCCTGTTCATGTGATGCAATTGCCCAACAGCGTTAAGGACGATGCCTCGCGTGCGTTATGGAAAGCCGAGATGCTGCGCTTGCAAAAAACGGTAGAAGAACGTTTTGGGCACGAGATTAGCGAAGATGCTCTGCGCGATGCCATTGCGCTGAAAAACCGCGAACGTCGCGCACTGGCTAATTTTTATCATCTTGGGCAGTTAAATCCTCCGGCGCTTAGCGGCAGCGACATTCTGAAAGTGGTTTACGGCGCAACCTTCCGGTTCGATAAAGAGGCGTTGATCAATGAACTGGATGCAATGACCGCCCGCGTTCGTCAGCAGTGGGAAGAAGGCCAGCGACTGGACCCGCGTCCGCGCATTTTAATCACCGGCTGCCCGATTGGCGGCGCAGCAGAAAAAGTGGTGCGCGCGATTGAAGAGAATGGCGGCTGGGTTGTCGGTTATGAAAACTGCACCGGGGCGAAAGCGACCGAGCAATGCGTGGCAGAAACGGGCGATGTCTACGACGCGCTGGCGGATAAATATCTGGCGATTGGCTGCTCCTGTGTTTCGCCGAACGATCAGCGCCTGAAAATGCTCAGCCAGATGGTGGAGGAATATCAGGTCGATGGCGTAGTTGATGTGATTTTGCAGGCGTGCCATACCTACGCGGTGGAATCGCTGGCGATTAAACGTCATGTGCGCCAGCAGCACAACATTCCTTATATCGCTATTGAAACAGACTACTCCACCTCGGATGTCGGGCAGCTCAGTACCCGTGTCGCGGCCTTTATTGAGATGCTGTAA", + "dna_sequence_length": 1152, + "functions": [ + "putative 2-hydroxyglutaryl-CoA dehydratase" + ], + "id": "CDS_4254", + "location": [ + [ + "NC_000913", + 4565850, + "-", + 1152 + ] + ], + "md5": "1fd767843afe1d9eea06a3cafd89fda2", + "parent_gene": "", + "protein_md5": "b3af9dec4dc611b39b183d3abc9f204f", + "protein_translation": "MSLVTDLPAIFDQFSEARQTGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAIGCSCVSPNDQRLKMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAIETDYSTSDVGQLSTRVAAFIEML", + "protein_translation_length": 383, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014219" + ], + [ + "gene_synonym", + "ECK4327" + ], + [ + "gene_synonym", + "EcoGene:EG12575" + ], + [ + "gene_synonym", + "GI:16132157" + ], + [ + "gene_synonym", + "GeneID:948860" + ], + [ + "gene_synonym", + "JW4299" + ], + [ + "gene_synonym", + "NP_418756.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39385" + ], + [ + "gene_synonym", + "b4336" + ], + [ + "gene_synonym", + "yjiN" + ] + ], + "dna_sequence": "ATGAATAAACTCATCGAACTCAGACGCGCCAAAAGGTTGGCGCTCTCTTTACTGCTTATCGCCGCTGCTACCTTTGTCGTTACGCTGTTTTTGCCGCCCAATTTTTGGGTGAGCGGCGTGAAGGCGATTGCTGAAGCGGCGATGGTCGGCGCGCTGGCGGACTGGTTTGCGGTGGTGGCGCTGTTTCGCCGCGTGCCGATTCCGATCATTTCTCGCCATACGGCGATTATCCCGCGTAATAAAGACCGGATTGGCGAAAATCTCGGCCAGTTCGTGCAGGAAAAATTTCTTGATACTCAATCCCTGGTGGCATTGATTCGACGCCACGAACCGGCGTTGCTGATTGGCAACTGGTTTAGCCAGCCAGAAAACGCCCGCCGCGTTGGTCAGCATCTGTTGCAGATCATGAGCGGTTTTCTCGAACTTACCGATGATGCGCGTATTCAGCGCCTGCTTAAGCGCGCGGTCCATCGGGCGATTGATAAGGTCGATCTTTCCGGCACCAGTGCGTTGATGCTGGAGAGTATGACCAAAAACGATCGTCATCAGGTGCTGCTGGATACGCTGATCGCACAGTTGATCGCCCTTCTCCAGCGCGATAAATCGCGCAAGTTTATCGCCCAGCAAATTGTTCGCTGGCTGGAGAGCGAGCATCCACTGAAAGCCAAAATTCTCCCCACCGAATGGTTGGGCGAACATAGCGCGGAGTTGGTTTCTGACGCGGTGAATTCTTTGCTTGATGATATTAGTCGCGATCGTGCGCATCAGATCCGCCATGCGTTTGATCGCGCCACCTTCGCCCTGATCGACAAGCTGAAAAACGATCCGGAAATGGCAGCGCGAGCCGATGCCGTAAAAAGCTATCTGAAAGAAGATGAAGCTTTTAATCGCTATCTCAGTGAATTGTGGGGGGATTTACGGGAATGGCTGAAAGTGGATATCAACAGTGAAGATTCTCGTGTGAAAGAACGCATCGCACGAGCGGGTCAATGGTTTGGCGAAACGTTAATTGCCGATGATGCCTTGCGGGCGTCGTTAAATGGTCATCTTGAACAAGCCGCGCACCGCGTCGCGCCTGAGTTTTCCGCATTCCTGACGCGCCACATCAGCGATACGGTAAAAAGCTGGGATGCGCGGGATATGTCGCGGCAAATAGAGTTAAATATCGGCAAAGATCTGCAGTTTATTCGTGTCAACGGTACGCTGGTTGGCGGTTGTATTGGGCTAATTTTATATTTGCTGTCGCAGCTCCCGGCCTTGTTCCCCCTCGGCAATTTTTAG", + "dna_sequence_length": 1281, + "functions": [ + "zinc-type alcohol dehydrogenase-like protein" + ], + "id": "CDS_4255", + "location": [ + [ + "NC_000913", + 4567246, + "-", + 1281 + ] + ], + "md5": "03f913ce37f2af2ca07370a3ca3e55c9", + "parent_gene": "", + "protein_md5": "b639a67275714d06299c7666d66ffce3", + "protein_translation": "MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF", + "protein_translation_length": 426, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014221" + ], + [ + "gene_synonym", + "ECK4328" + ], + [ + "gene_synonym", + "EcoGene:EG12576" + ], + [ + "gene_synonym", + "GI:16132158" + ], + [ + "gene_synonym", + "GeneID:948861" + ], + [ + "gene_synonym", + "JW4300" + ], + [ + "gene_synonym", + "NP_418757.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39386" + ], + [ + "gene_synonym", + "b4337" + ], + [ + "gene_synonym", + "mdtM" + ], + [ + "gene_synonym", + "yjiO" + ] + ], + "dna_sequence": "ATGCCACGTTTTTTTACCCGCCATGCCGCCACGCTGTTTTTCCCGATGGCGTTGATTTTGTATGACTTTGCTGCGTATCTGTCGACGGATCTGATCCAGCCTGGGATCATTAATGTGGTACGTGATTTTAATGCCGATGTCAGTCTGGCCCCTGCTGCCGTCAGTCTCTATCTTGCTGGCGGTATGGCGTTACAGTGGCTGCTGGGGCCGCTTTCCGACAGAATTGGCCGCAGGCCGGTGCTGATTACCGGGGCGCTAATTTTTACCCTTGCCTGCGCCGCGACAATGTTCACAACGTCTATGACACAGTTTCTTATCGCGCGTGCAATTCAGGGCACCAGTATCTGTTTTATTGCCACCGTTGGTTATGTCACGGTGCAGGAGGCGTTCGGACAGACAAAAGGGATCAAGTTGATGGCGATTATCACCTCCATCGTACTGATTGCGCCGATTATCGGCCCGCTTTCCGGCGCAGCTCTGATGCACTTTATGCACTGGAAAGTCCTTTTTGCCATCATTGCGGTTATGGGTTTTATCTCATTTGTTGGCTTACTGTTGGCGATGCCAGAGACGGTGAAGCGCGGCGCGGTTCCGTTTAGCGCCAAAAGCGTCTTGCGCGATTTTCGTAATGTCTTTTGCAATCGGCTGTTCCTCTTTGGCGCAGCAACCATCTCTTTAAGCTATATCCCGATGATGAGCTGGGTGGCTGTCTCGCCGGTGATCCTTATCGATGCAGGCAGCTTAACAACTTCGCAGTTCGCCTGGACACAGGTTCCGGTGTTCGGCGCGGTGATTGTTGCGAATGCCATCGTGGCGCGTTTTGTTAAAGATCCGACCGAACCGCGGTTTATCTGGCGTGCCGTACCCATTCAACTGGTCGGCCTCTCGCTGTTGATTGTCGGCAATCTGCTGTCGCCGCACGTCTGGCTGTGGTCGGTGCTGGGCACCAGTCTGTATGCTTTCGGGATTGGTTTGATTTTCCCGACCTTATTCCGCTTTACGCTGTTTTCCAATAAGTTACCGAAAGGGACCGTCTCCGCATCGCTAAATATGGTGATCCTGATGGTGATGTCGGTCTCGGTCGAAATCGGCCGCTGGCTATGGTTTAACGGCGGTCGCTTGCCGTTTCATCTGTTAGCCGTTGTGGCGGGCGTTATCGTCGTTTTCACCCTGGCGGGATTGCTCAATCGCGTGCGCCAGCATCAGGCAGCCGAGCTAGTGGAGGAGCAGTGA", + "dna_sequence_length": 1233, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_4256", + "location": [ + [ + "NC_000913", + 4568519, + "-", + 1233 + ] + ], + "md5": "43bad8ad7bc80a6a9647c8d24eff8370", + "parent_gene": "", + "protein_md5": "668bc781042fc4e56f0d15fa7a269af5", + "protein_translation": "MPRFFTRHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFNADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAALMHFMHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFCNRLFLFGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLSLLIVGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNKLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAELVEEQ", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014227" + ], + [ + "gene_synonym", + "ASAP:ABE-0014229" + ], + [ + "gene_synonym", + "ECK4329" + ], + [ + "gene_synonym", + "EcoGene:EG12577" + ], + [ + "gene_synonym", + "GeneID:948866" + ], + [ + "gene_synonym", + "JW5953" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39387" + ], + [ + "gene_synonym", + "b4339" + ], + [ + "gene_synonym", + "yjiP" + ], + [ + "gene_synonym", + "yjiQ" + ] + ], + "dna_sequence": "ATGACAAACTTCACGACCAGCACGCCGCATGATGCATTATTTAAAACCTTTCTCACGCACCCTGACACTGCGCGGGATTTTATGGAGATTCACTTACCTAAAGATTTACGTGAACTGTGCGATCTCGATAGCTTAAAACTGGAATCCGCCAGCTTTGTCGATGAAAAATTGCGGGCGCTACACTCCGATATTTTATGGTCGGTAAAGACCCGCGAAGGCGATGGCTATATCTATGTGGTGATTGAACATCAGAGCCGCGAGGACATTCATATGGCCTTTCGCCTGATGCGCTATTCCATGGCGGTGATGTAGCGCCATATAGAGCATGATAAACGCCAGCCGCTACCGTTGGTCATCCCGATGCTATTTTATCACGGTAGCCGTAGTCCTTACCCCTGGTCCCTGTGCTGGCTGGACGAATTTGCCGACCCGACTACCGCACGGAAGCTTTATAACGCCGCGTTCCCGCTGGTGGATGTTACTGTCGTGCCAGACGACGAGATTGTGCAGCATCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAA", + "dna_sequence_length": 921, + "id": "CDS_4257", + "location": [ + [ + "NC_000913", + 4568998, + "+", + 921 + ] + ], + "md5": "6cf9a211443c62c1cd503a968cb75f29", + "parent_gene": "", + "protein_md5": "73f87c27c9ac302d9f41682e2f26e6ea", + "protein_translation": "MTNFTTSTPHDALFKTFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVM", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014232" + ], + [ + "gene_synonym", + "ECK4331" + ], + [ + "gene_synonym", + "EcoGene:EG12579" + ], + [ + "gene_synonym", + "GI:16132161" + ], + [ + "gene_synonym", + "GeneID:949089" + ], + [ + "gene_synonym", + "JW4303" + ], + [ + "gene_synonym", + "NP_418760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39389" + ], + [ + "gene_synonym", + "b4340" + ], + [ + "gene_synonym", + "yjiR" + ] + ], + "dna_sequence": "ATGACGCGTTATCAACATCTGGCGACTCTGCTTGCCGAACGGATTGAGCAAGGGCTGTATCGTCACGGGGAGAAATTGCCGTCGGTGCGCAGCTTAAGTCAGGAGCACGGCGTCAGTATCAGCACCGTGCAGCAGGCGTATCAGACGCTGGAGACGATGAAGCTCATCACTCCGCAGCCGCGTTCGGGTTATTTTGTCGCACAACGTAAAGCCCAGCCGCCAGTACCGCCGATGACGCGTCCGGTGCAGCGCCCGGTGGAAATTACCCAGTGGGATCAGGTGCTGGATATGCTGGAGGCGCATAGCGACAGTTCCATTGTTCCGTTAAGCAAAAGCACACCGGATGTCGAAGCGCCCAGCCTGAAACCGCTGTGGCGGGAGCTAAGCCGGGTGGTGCAGCATAATCTGCAAACCGTTCTCGGTTATGACTTGTTAGCCGGTCAGCGAGTATTGCGAGAGCAGATTGCCCGCCTGATGCTCGACAGCGGCTCGGTGGTCACCGCCGATGACATCATCATCACCAGCGGCTGCCATAACTCGATGTCGCTGGCGTTAATGGCAGTGTGTAAACCGGGCGATATTGTCGCGGTCGAATCCCCCTGTTATTACGGTTCGATGCAGATGCTGCGCGGCATGGGCGTGAAAGTGATTGAAATCCCAACCGATCCAGAAACTGGCATCAGCGTTGAAGCGCTGGAACTGGCGCTGGAACAGTGGCCGATTAAAGGCATCATTCTGGTGCCAAACTGTAATAATCCGCTGGGATTTATTATGCCGGACGCGCGCAAACGGGCCGTTCTCTCTCTCGCTCAGCGTCATGATATTGTGATTTTTGAAGATGATGTCTATGGCGAACTGGCGACGGAGTATCCGCGCCCGCGGACCATTCATTCCTGGGATATCGACGGGCGAGTGCTGTTGTGCAGCTCGTTCAGTAAAAGTATTGCACCAGGCCTGCGCGTGGGTTGGGTCGCACCGGGGCGTTATCACGATAAACTGATGCATATGAAATACGCCATCAGCAGCTTTAATGTGCCGTCCACGCAAATGGCGGCGGCAACGTTTGTGCTGGAAGGTCACTATCATCGCCATATCCGGCGGATGCGGCAGATCTATCAGCGCAATTTGGCGCTTTATACCTGCTGGATACGGGAATATTTTCCCTGCGAAATCTGTATTACGCGCCCGAAAGGCGGATTTTTACTGTGGATAGAATTGCCTGAACAGGTCGATATGGTCTGCGTCGCGCGGCAGCTGTGCCGCATGAAAATCCAGGTGGCGGCAGGCTCGATTTTCTCAGCTTCCGGCAAATACCGTAATTGTCTGCGCATCAACTGCGCTTTGCCGCTCAGCGAAACCTATCGCGAAGCACTGAAGCAAATTGGCGAGGCCGTGTATCGGGCAATGGAATAA", + "dna_sequence_length": 1413, + "functions": [ + "putative DNA-binding transcriptional regulator/putative aminotransferase" + ], + "id": "CDS_4258", + "location": [ + [ + "NC_000913", + 4571574, + "-", + 1413 + ] + ], + "md5": "cbed64fa4d2f8fd1a004b1c16d1efaa3", + "parent_gene": "", + "protein_md5": "da0147bc55215c8f28823ba0e0568575", + "protein_translation": "MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHSDSSIVPLSKSTPDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGEAVYRAME", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014236" + ], + [ + "gene_synonym", + "ECK4332" + ], + [ + "gene_synonym", + "EcoGene:EG12580" + ], + [ + "gene_synonym", + "GI:16132162" + ], + [ + "gene_synonym", + "GeneID:948903" + ], + [ + "gene_synonym", + "JW4304" + ], + [ + "gene_synonym", + "NP_418761.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39390" + ], + [ + "gene_synonym", + "b4341" + ], + [ + "gene_synonym", + "yjiS" + ] + ], + "dna_sequence": "ATGGAATTTCACGAAAACAGAGCTAAAGCGCCGTTTATCGGCCTGGTGCAACTCTGGCAGGCGGTGAGGCGTTGGCGGCGGCAAATGCAGACCCGACGCGTGTTACAGCAGATGAGTGATGAGCGGTTGAAGGATATCGGGTTACGCAGGGAGGATGTGGAGTGA", + "dna_sequence_length": 165, + "functions": [ + "DUF1127 family protein" + ], + "id": "CDS_4259", + "location": [ + [ + "NC_000913", + 4571751, + "+", + 165 + ] + ], + "md5": "73bc31bbf6bcffb444613406990c21e4", + "parent_gene": "", + "protein_md5": "3d9de68baafc0d21f6e70e9890af0763", + "protein_translation": "MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLKDIGLRREDVE", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014239" + ], + [ + "gene_synonym", + "ECK4333" + ], + [ + "gene_synonym", + "EcoGene:EG12581" + ], + [ + "gene_synonym", + "GeneID:945056" + ], + [ + "gene_synonym", + "JW5787" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39391" + ], + [ + "gene_synonym", + "b4342" + ], + [ + "gene_synonym", + "yjiT" + ] + ], + "dna_sequence": "TTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAACCAATGATGAATATACCCAATTAACGCAGCTACTCCGTGCAGTCGGTCAATCACAATCTAATATATGTAATAGGGACTTTGCTGCCTGTTTTGTTCTTTTTTGCTCTGAGTGGTACCGCAGGGATTATGAACGGCAATGCGGATGGACGTGGGACCCTATATATAAAAAAATAGGGATTTCATTCACCGCCACAGAGCTTGGTACTATCGTACCGAAAGGGATGGAAGATTACTGGCTGCGCCCAATTCGATTTTATGAATCTGAACGACGCAATTTTCTCGGAACATTATTCAGTGAAGGTGGTTTACCTTTCCGGCTACTCAAAGAATCAGACAGTCGCTTTCTGGCTGTTTTCTCCAGGATCCTTGGACAATATGAGCAAGCAAAGCAGTCAGGTTTTTCTGCCCTTTCGCTGGCAAGAGCTGTCATAGAAAAATCAGCGCTGCCAACTGTTTTTAGCGAAGATACCTCTGTAGAACTTATCAGTCATATGGCTGATAACCTCAATTCCTTAGTACTTACTCACAACCTAATAAATCACAAAGAACCAGTACAACAGCTTGAGAAGGTTCACCCTACCTGGCGAAGCGAGTTTCCAATACCGTTAGATGATGAAACAGGAACGCATTTTTTGAATGGACTGCTATGCGCAGCCTCTGTAGAGGCTAAGCCTCGACTACAAAAAAATAAGAGTACGCGTTGCCAATTCTATTGGTCAGAAAAGCATCCAGATGAGCTTAGGGTGATAGTATCTCTTCCGGACGAAGTTTCCTTTCCTGTAACAAGCGAGCCGTCAACTACGCGCTTTGAACTTGCCATTTGTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTTGGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGGATAATAGCAATGTTGCTGGTTTTGATGGCCAATCGAGGGCAGTAAACGTATTAGGACTAAAAGCACTACCTGTGAAGGGATGTCAGGACGTTACAGTTACAGCAAATGAAACTTATCGGATTCGCACCGGAAGAGAACAAATCAGCATCGGAAGGTTTGCTCTAAATGGAAAGCGTGCAAGCTGGGTTTGTCATCCAGATGAAACATTTATTGGTGTACCAAAAGTCATTTCTACACTACCGGATATTCAAAGCATTGATGTAACG", + "dna_sequence_length": 1503, + "id": "CDS_4260", + "location": [ + [ + "NC_000913", + 4572414, + "+", + 1503 + ] + ], + "md5": "575cad3f150815d92c9748ef1aeb02fa", + "parent_gene": "", + "protein_md5": "1a9dcd9861d82d3efc7e8a7d2bfb1430", + "protein_translation": "LGQSEYISWVKCTSWLSNFVNLRGLRQPDGRPLYEYHATNDEYTQLTQLLRAVGQSQSNICNRDFAACFVLFCSEWYRRDYERQCGWTWDPIYKKIGISFTATELGTIVPKGMEDYWLRPIRFYESERRNFLGTLFSEGGLPFRLLKESDSRFLAVFSRILGQYEQAKQSGFSALSLARAVIEKSALPTVFSEDTSVELISHMADNLNSLVLTHNLINHKEPVQQLEKVHPTWRSEFPIPLDDETGTHFLNGLLCAASVEAKPRLQKNKSTRCQFYWSEKHPDELRVIVSLPDEVSFPVTSEPSTTRFELAICEDGEEVSGLGPAYASLENRQATVRLRKSEVRFGRQNPSAGLSLVARAGGMIVGSIKLDDSEIAIGEVPLTFIVDADQWLLQGQASCSVRSSDVLIVLPRDNSNVAGFDGQSRAVNVLGLKALPVKGCQDVTVTANETYRIRTGREQISIGRFALNGKRASWVCHPDETFIGVPKVISTLPDIQSIDVT", + "protein_translation_length": 501, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174119" + ], + [ + "gene_synonym", + "ECK4467" + ], + [ + "gene_synonym", + "EcoGene:EG12583" + ], + [ + "gene_synonym", + "GeneID:2847669" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39393" + ], + [ + "gene_synonym", + "b4486" + ], + [ + "gene_synonym", + "mcrD" + ], + [ + "gene_synonym", + "yjiU" + ], + [ + "gene_synonym", + "yjiV" + ] + ], + "dna_sequence": "TTACACGTGCTGACAAAACAGCATTACAGCCAGCAGGAAGTACTGCGTTGGATCGATGTCTGTTCAGGGACTCAACCTAATGCAAAGGATCCCGCATTTCTTAAAGTCAGGGCGCATATCTTCCAGCGTAATACCTAGGGAATATGGGCTTGTGTTGATAAAGATTGCAGATTAAAGCACGGTACACCGCTCGACAAAGGCTGGCCCTTTGGCTATGTGTATGTGAACCAGCGACAAAATTGTGACTGTGGAAGCCCTGTATACGAAGTTGCATTCTGTAATGATTGTAATGAGCCTCATCTTCTGGCACGGGACAAAAAGGGCAAACTAGTCCAGTGGGAAAATAAAGGTGGCGATGAATTCTCTTTGCAGGATGAAGTACCTGTTGAACATGACGCTACAGAAGAAAAAGTCGAAAAAGAGAACAGTTTTCAGCCTCCGTTGATTATTGCCGCAGGAGAGACCAGCGAGGCAGGTTATACCCTACAACGCCTCGACCGTCAGACGCGCCGTATTGGCGTTATTAACAATGACAGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGCGTCGGACCAGATTCGTTGCCAGGACGAGGTCGTCGACTCATCACCTTTACAGACAGTCGACAAGGGACAGCCCGAATGGCGGTGCGTATGCAGCAAGAAGCAGAACGCAGTCGCTTACGCGGAAGCGTAGTCGAAATTCTCAGCTGGCATCAAAGGACGCAAACGTCTACAGCGCCGAATGCCAATGCCGATCTGGAAAAATTAGCGGCCAGGGCGAAGCAAGCCCGTGAGCAGGCAGAAGAATATCGAAGCTGGGGAATGCCAGACCAGGCGAAATTGTCACAAGCACAGGCTGAACAGCTTGAACAGGCTTATCAGGCTGCAACCGGTGGGAAAGCCGCGACTATCCTGGTATCCCGAACCTGGACGGAGATGGTTAACGAGCTTAAAGAGAGAGCCGATATCCGCGGGCCGGTTCTGCAATATAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAAAAAGGATTAACGCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAACTTCACACAGCTGGATGATGAGCTGAAAAACTGGATTGGTAGCCGTTTTTCATCAAAATTCGTCCGTAACCCGGAATCAAAAGATCCTGAAGATAATCAGAACAGACGCTGGCCTCAAATTCGTAATGGCAACGTATCCCATCGTTTAGCGAAGTTGCTGATGCTGGGGGCTGGATTCAAAACCGTCAATGCGGCAACTATTGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCGCGTGATGACGCTGGCCTCTCGCAGCCAGCAGGCAACGATTCCGGGGCCGGAGTGGCACCTGAATGACGAACTGGTGGTGCGTAGTCTCGGTTATAAAACGGTAGAACTGAACGAGTTTATTCTGCCGGCTAAAGCCACCAACGCTGTCGAGCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTCACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCGCCCCGGTAACCGGCCTTTCCATGACTGGATGAGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGA", + "dna_sequence_length": 2937, + "id": "CDS_4261", + "location": [ + [ + "NC_000913", + 4573919, + "+", + 2937 + ] + ], + "md5": "d80239dcf52d8d5eef194b69f59ca403", + "parent_gene": "", + "protein_md5": "3e56f94e51969dd913ceb138175c5bf7", + "protein_translation": "LHVLTKQHYSQQEVLRWIDVCSGTQPNAKDPAFLKVRAHIFQRNT", + "protein_translation_length": 45, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014248" + ], + [ + "gene_synonym", + "ECK4335" + ], + [ + "gene_synonym", + "EcoGene:EG10575" + ], + [ + "gene_synonym", + "GI:16132166" + ], + [ + "gene_synonym", + "GeneID:948880" + ], + [ + "gene_synonym", + "JW5789" + ], + [ + "gene_synonym", + "NP_418765.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15006" + ], + [ + "gene_synonym", + "b4345" + ], + [ + "gene_synonym", + "mcrC" + ] + ], + "dna_sequence": "GTGGAACAGCCCGTGATACCTGTCCGTAATATCTATTACATGCTTACCTATGCATGGGGTTATTTACAGGAAATTAAGCAGGCAAACCTTGAAGCCATACCCGGTAACAATCTTCTTGATATCCTGGGGTATGTATTAAATAAAGGGGTTTTACAGCTTTCACGCCGAGGGCTTGAGCTTGATTACAATCCTAACACCGAGATCATTCCTGGCATCAAAGGGCGAATAGAGTTTGCTAAAACAATACGCGGCTTCCATCTTAATCATGGGAAAACCGTCAGTACTTTTGATATGCTTAATGAAGACACGCTGGCTAACCGAATTATAAAAAGCACATTAGCCATATTAATTAAGCATGAAAAGTTAAATTCAACTATCAGAGATGAAGCTCGTTCACTTTATAGAAAATTACCGGGCATTAGCACTCTTCATTTAACTCCGCAGCATTTCAGCTATCTGAATGGCGGAAAAAATACGCGTTATTATAAATTCGTTATCAGTGTCTGCAAATTCATCGTCAATAATTCTATTCCAGGTCAAAACAAAGGACACTACCGTTTCTATGATTTTGAAAGAAACGAAAAAGAGATGTCATTACTTTATCAAAAGTTTCTTTATGAATTTTGCCGTCGTGAATTAACGTCTGCAAACACAACCCGCTCTTATTTAAAATGGGATGCATCGAGTATATCGGATCAGTCACTTAATTTGTTACCTCGAATGGAAACTGACATCACCATTCGCTCATCAGAAAAAATACTTATCGTTGACGCCAAATACTATAAGAGCATTTTTTCACGACGAATGGGAACAGAAAAATTTCATTCGCAAAATCTTTATCAACTGATGAATTACTTATGGTCGTTAAAGCCTGAAAATGGCGAAAACATAGGGGGGTTATTAATATATCCCCACGTAGATACCGCAGTGAAACATCGTTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAA", + "dna_sequence_length": 1047, + "functions": [ + "5-methylcytosine-specific restriction enzyme McrBC, subunit McrC" + ], + "id": "CDS_4262", + "location": [ + [ + "NC_000913", + 4577958, + "-", + 1047 + ] + ], + "md5": "94c55ce9c251821cd9b80b03f9f7445f", + "parent_gene": "", + "protein_md5": "79a071b5d5fcd9703d246487d2373a51", + "protein_translation": "MEQPVIPVRNIYYMLTYAWGYLQEIKQANLEAIPGNNLLDILGYVLNKGVLQLSRRGLELDYNPNTEIIPGIKGRIEFAKTIRGFHLNHGKTVSTFDMLNEDTLANRIIKSTLAILIKHEKLNSTIRDEARSLYRKLPGISTLHLTPQHFSYLNGGKNTRYYKFVISVCKFIVNNSIPGQNKGHYRFYDFERNEKEMSLLYQKFLYEFCRRELTSANTTRSYLKWDASSISDQSLNLLPRMETDITIRSSEKILIVDAKYYKSIFSRRMGTEKFHSQNLYQLMNYLWSLKPENGENIGGLLIYPHVDTAVKHRYKINGFDIGLCTVNLGQEWPCIHQELLDIFDEYLK", + "protein_translation_length": 348, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014250" + ], + [ + "gene_synonym", + "ECK4336" + ], + [ + "gene_synonym", + "EcoGene:EG10574" + ], + [ + "gene_synonym", + "GI:90111737" + ], + [ + "gene_synonym", + "GeneID:949122" + ], + [ + "gene_synonym", + "JW5871" + ], + [ + "gene_synonym", + "NP_418766.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15005" + ], + [ + "gene_synonym", + "b4346" + ], + [ + "gene_synonym", + "mcrB" + ], + [ + "gene_synonym", + "rglB" + ] + ], + "dna_sequence": "ATGGAATCTATTCAACCCTGGATTGAAAAATTTATTAAGCAAGCACAGCAACAACGTTCGCAATCCACTAAAGATTATCCAACGTCTTACCGTAACCTGCGAGTAAAATTGAGTTTCGGTTATGGTAATTTTACGTCTATTCCCTGGTTTGCATTTCTTGGAGAAGGTCAGGAAGCTTCTAACGGTATATATCCCGTTATTCTCTATTATAAAGATTTTGATGAGTTGGTTTTGGCTTATGGTATAAGCGACACGAATGAACCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTCTATGCTGGACAACATAATCAACGACTATAAATTAATATTTAATTCTGGCAAGAGTGTTATTCCACCTATGTCAAAAACTGAATCATACTGTCTGGAAGATGCGTTAAATGATTTGTTTATCCCTGAAACCACAATAGAGACGATACTCAAACGATTAACCATCAAAAAAAATATTATCCTCCAGGGGCCGCCCGGCGTTGGAAAAACCTTTGTTGCACGCCGTCTGGCTTACTTGCTGACAGGAGAAAAGGCTCCGCAACGCGTCAATATGGTTCAGTTCCATCAATCTTATAGCTATGAGGATTTTATACAGGGCTATCGTCCGAATGGCGTCGGCTTCCGACGTAAAGACGGCATATTTTACAATTTTTGTCAGCAAGCTAAAGAGCAGCCAGAGAAAAAGTATATTTTTATTATAGATGAAATCAATCGTGCCAATCTCAGTAAAGTATTTGGCGAAGTGATGATGTTAATGGAACATGATAAACGAGGTGAAAACTGGTCTGTTCCCCTAACCTACTCCGAAAACGATGAAGAACGATTCTATGTCCCGGAGAATGTTTATATCATCGGTTTAATGAATACTGCCGATCGCTCTCTGGCCGTTGTTGACTATGCCCTACGCAGACGATTTTCTTTCATAGATATTGAGCCAGGTTTTGATACACCACAGTTCCGGAATTTTTTACTGAATAAAAAAGCAGAACCTTCATTTGTTGAGTCTTTATGCCAAAAAATGAACGAGTTGAACCAGGAAATCAGCAAAGAGGCCACTATCCTTGGGAAAGGATTCCGCATTGGGCATAGTTACTTCTGCTGTGGGTTGGAAGATGGCACCTCTCCGGATACGCAATGGCTTAATGAAATTGTGATGACGGATATCGCCCCTTTACTCGAAGAATATTTCTTTGATGACCCCTATAAACAACAGAAATGGACCAACAAATTATTAGGGGACTCATAG", + "dna_sequence_length": 1380, + "functions": [ + "5-methylcytosine-specific restriction enzyme McrBC, subunit McrB" + ], + "id": "CDS_4263", + "location": [ + [ + "NC_000913", + 4579337, + "-", + 1380 + ] + ], + "md5": "30c7f7882dee476f6e2878335a0f9153", + "parent_gene": "", + "protein_md5": "d3d52507d6ad18ac7e64dd834ad56493", + "protein_translation": "MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDDPYKQQKWTNKLLGDS", + "protein_translation_length": 459, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014253" + ], + [ + "gene_synonym", + "ECK4337" + ], + [ + "gene_synonym", + "EcoGene:EG12584" + ], + [ + "gene_synonym", + "GI:145698346" + ], + [ + "gene_synonym", + "GeneID:949088" + ], + [ + "gene_synonym", + "JW4310" + ], + [ + "gene_synonym", + "NP_418767.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39394" + ], + [ + "gene_synonym", + "b4347" + ], + [ + "gene_synonym", + "dinL" + ], + [ + "gene_synonym", + "sosC" + ], + [ + "gene_synonym", + "symE" + ], + [ + "gene_synonym", + "yjiW" + ] + ], + "dna_sequence": "ATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTATGCGAGTCGCTACCCGGATTACAGCCGTATTCCCGCCATCACCCTGAAAGGTCAGTGGCTGGAAGCCGCCGGTTTTGCCACTGGCACGGCGGTAGATGTCAAAGTGATGGAAGGCTGTATTGTCCTCACCGCCCAACCACCCGCCGCCGAGGAGAGCGAACTGATGCAGTCGCTACGCCAGGTGTGCAAACTGTCGGCGCGTAAACAAAAGCAGGTGCAGGCGTTTATTGGAGTGATTGCCGGTAAACAGAAAGTCGCGTAA", + "dna_sequence_length": 342, + "functions": [ + "toxic peptide regulated by antisense sRNA symR" + ], + "id": "CDS_4264", + "location": [ + [ + "NC_000913", + 4579840, + "-", + 342 + ] + ], + "md5": "9bb65cb60a4985c5bda9bd785108143a", + "parent_gene": "", + "protein_md5": "16820e7acaeecd23f6e3732b11b924e9", + "protein_translation": "MTDTHSIAQPFEAEVSPANNRHVTVGYASRYPDYSRIPAITLKGQWLEAAGFATGTAVDVKVMEGCIVLTAQPPAAEESELMQSLRQVCKLSARKQKQVQAFIGVIAGKQKVA", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014258" + ], + [ + "gene_synonym", + "ECK4338" + ], + [ + "gene_synonym", + "EcoGene:EG10460" + ], + [ + "gene_synonym", + "GI:16132169" + ], + [ + "gene_synonym", + "GeneID:948867" + ], + [ + "gene_synonym", + "JW4311" + ], + [ + "gene_synonym", + "NP_418768.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05719" + ], + [ + "gene_synonym", + "b4348" + ], + [ + "gene_synonym", + "hsdS" + ], + [ + "gene_synonym", + "hsp" + ], + [ + "gene_synonym", + "hss" + ] + ], + "dna_sequence": "ATGAGTGCGGGGAAATTGCCGGAGGGGTGGGTTATCGCCCCAGTATCTACGGTCACAACTCTAATCCGAGGAGTAACGTATAAAAAAGAGCAGGCAATAAATTATCTAAAAGATGATTATTTGCCTCTTATCCGTGCGAACAATATTCAGAATGGCAAGTTTGATACTACGGACTTGGTTTTTGTTCCTAAAAATCTTGTTAAAGAAAGTCAAAAAATATCTCCTGAAGATATTGTTATTGCAATGTCATCAGGGAGCAAATCCGTAGTTGGTAAATCCGCACATCAGCATCTACCATTTGAATGTAGTTTCGGCGCATTTTGCGGTGTATTACGTCCTGAAAAACTTATATTTTCTGGTTTTATTGCTCATTTCACAAAATCTTCTCTTTATCGAAACAAAATTTCATCACTTTCTGCTGGTGCAAATATTAATAATATTAAGCCGGCAAGCTTTGATTTGATAAATATACCAATCCCACCACTTGCCGAACAAAAAATCATCGCTGAAAAACTCGATACGCTGCTGGCGCAGGTAGACAGCACCAAAGCACGTTTTGAGCAAATCCCACAAATCCTGAAACGTTTTCGTCAAGCGGTATTGGGGGGCGCAGTTAATGGAAAATTGACAGAAAAATGGCGTAATTTTGAGCCGCAACATTCTGTATTTAAGAAGTTAAATTTTGAATCTATCTTAACTGAATTACGTAATGGTCTTTCATCAAAGCCAAATGAAAGTGGTGTTGGTCATCCAATACTACGCATTAGTTCTGTACGTGCTGGCCATGTAGATCAAAACGATATTCGGTTTCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTTTTTTCATCCCCCTCAGCACGAAATGCAATGATGAACTGCGTGAAAACAACTTCTGGTCAAAAAGGTATTTCAGGAAAAGATATCAAATCCCAAGTTGTTTTATTACCTCCAGTAAAAGAACAAGCCGAAATCGTTCGCCGCGTCGAGCAACTCTTCGCCTACGCCGACACCATAGAAAAACAGGTCAACAACGCCTTAGCCCGCGTCAACAACCTGACGCAATCCATCCTGGCAAAAGCGTTCCGTGGTGAACTTACCGCCCAGTGGCGGGCCGAAAACCCGGATTTGATCAGCGGAGAAAACAGCGCCGCCGCGTTGCTGGAAAAAATCAAAGCTGAACGCGCAGCTAGCGGGGGTAAAAAAGCCTCACGTAAAAAATCCTGA", + "dna_sequence_length": 1395, + "functions": [ + "specificity determinant for hsdM and hsdR" + ], + "id": "CDS_4265", + "location": [ + [ + "NC_000913", + 4581462, + "-", + 1395 + ] + ], + "md5": "965f16d92fdce2d6783c865ca78a3472", + "parent_gene": "", + "protein_md5": "7e75f62a2f893246c1048a171350c7da", + "protein_translation": "MSAGKLPEGWVIAPVSTVTTLIRGVTYKKEQAINYLKDDYLPLIRANNIQNGKFDTTDLVFVPKNLVKESQKISPEDIVIAMSSGSKSVVGKSAHQHLPFECSFGAFCGVLRPEKLIFSGFIAHFTKSSLYRNKISSLSAGANINNIKPASFDLINIPIPPLAEQKIIAEKLDTLLAQVDSTKARFEQIPQILKRFRQAVLGGAVNGKLTEKWRNFEPQHSVFKKLNFESILTELRNGLSSKPNESGVGHPILRISSVRAGHVDQNDIRFLECSESELNRHKLQDGDLLFTRYNGSLEFVGVCGLLKKLQHQNLLYPDKLIRARLTKDALPEYIEIFFSSPSARNAMMNCVKTTSGQKGISGKDIKSQVVLLPPVKEQAEIVRRVEQLFAYADTIEKQVNNALARVNNLTQSILAKAFRGELTAQWRAENPDLISGENSAAALLEKIKAERAASGGKKASRKKS", + "protein_translation_length": 464, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014260" + ], + [ + "gene_synonym", + "ECK4339" + ], + [ + "gene_synonym", + "EcoGene:EG10458" + ], + [ + "gene_synonym", + "GI:16132170" + ], + [ + "gene_synonym", + "GeneID:948872" + ], + [ + "gene_synonym", + "JW4312" + ], + [ + "gene_synonym", + "NP_418769.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08957" + ], + [ + "gene_synonym", + "b4349" + ], + [ + "gene_synonym", + "hsdM" + ], + [ + "gene_synonym", + "hsm" + ], + [ + "gene_synonym", + "hsp" + ] + ], + "dna_sequence": "ATGAACAATAACGATCTGGTCGCGAAGCTGTGGAAGCTGTGCGACAACCTGCGCGATGGCGGCGTTTCCTATCAAAACTACGTCAATGAACTCGCCTCGCTGCTGTTTTTGAAAATGTGTAAAGAGACCGGTCAGGAAGCGGAATACCTGCCGGAAGGTTACCGCTGGGATGACCTGAAATCCCGCATCGGCCAGGAGCAGTTGCAGTTCTACCGAAAAATGCTCGTGCATTTAGGCGAAGATGACAAAAAGCTGGTACAGGCAGTTTTTCATAATGTTAGTACCACCATCACCGAGCCGAAACAAATAACCGCACTGGTCAGCAATATGGATTCGCTGGACTGGTACAACGGCGCGCACGGTAAGTCGCGCGATGACTTCGGCGATATGTACGAAGGGCTGTTGCAGAAGAACGCGAATGAAACCAAGTCTGGTGCAGGCCAGTACTTCACCCCGCGTCCGCTGATTAAAACCATTATTCATCTGCTGAAACCGCAGCCGCGTGAAGTGGTGCAGGACCCGGCGGCAGGTACGGCGGGCTTTTTGATTGAAGCCGACCGCTATGTTAAGTCGCAAACCAATGATCTGGACGACCTTGATGGCGACACGCAGGATTTCCAGATCCACCGCGCGTTTATCGGCCTCGAACTGGTGCCCGGCACCCGTCGTCTGGCACTGATGAACTGCCTGCTGCACGATATTGAAGGCAACCTCGACCACGGCGGCGCAATCCGTCTGGGCAACACTCTGGGTAGCGACGGTGAAAACCTGCCGAAGGCGCATATTGTCGCCACTAACCCGCCGTTTGGCAGCGCCGCAGGCACCAACATTACCCGCACCTTTGTTCACCCGACCAGCAACAAACAGTTGTGCTTTATGCAGCATATTATCGAAACGCTGCATCCCGGCGGTCGTGCGGCGGTGGTGGTGCCGGATAACGTGCTGTTTGAAGGCGGCAAAGGCACCGACATTCGTCGTGACCTGATGGATAAGTGTCATCTGCACACCATTCTGCGTCTGCCGACCGGTATTTTTTACGCTCAGGGCGTGAAGACCAACGTGCTGTTCTTTACCAAAGGGACGGTGGCGAACCCGAATCAGGATAAGAACTGTACCGATGATGTGTGGGTGTATGACCTGCGTACCAATATGCCGAGTTTCGGCAAGCGCACACCGTTTACCGACGAGCATTTGCAGCCGTTTGAGCGCGTGTATGGCGAAGACCCGCACGGTTTAAGCCCGCGCACTGAAGGTGAATGGAGTTTTAACGCCGAAGAGACGGAAGTTGCCGACAGCGAAGAGAACAAAAACACCGACCAGCATCTTGCTACCAGCCGCTGGCGCAAGTTCAGCCGTGAGTGGATCCGCACCGCAAAATCCGATTCGCTGGATATCTCCTGGCTGAAAGATAAAGACAGTATTGATGCCGACAGCCTGCCGGAGCCGGATGTATTAGCGGCAGAAGCGATGGGCGAACTGGTACAGGCGCTGTCTGAACTGGATGCGCTGATGCGTGAACTGGGGGCGAGCGATGAGGCCGATTTGCAGCGTCAGTTGCTGGAAGAAGCGTTTGGTGGGGTGAAGGAATGA", + "dna_sequence_length": 1590, + "functions": [ + "DNA methyltransferase M" + ], + "id": "CDS_4266", + "location": [ + [ + "NC_000913", + 4583048, + "-", + 1590 + ] + ], + "md5": "ae983ed21cbdbbe641c910d8282703e7", + "parent_gene": "", + "protein_md5": "98ff0fc7a56cc50b026f7de7db9792cf", + "protein_translation": "MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEAEYLPEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVSTTITEPKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPSFGKRTPFTDEHLQPFERVYGEDPHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMRELGASDEADLQRQLLEEAFGGVKE", + "protein_translation_length": 529, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014264" + ], + [ + "gene_synonym", + "ECK4340" + ], + [ + "gene_synonym", + "EcoGene:EG10459" + ], + [ + "gene_synonym", + "GI:226524764" + ], + [ + "gene_synonym", + "GeneID:948878" + ], + [ + "gene_synonym", + "JW4313" + ], + [ + "gene_synonym", + "NP_418770.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08956" + ], + [ + "gene_synonym", + "b4350" + ], + [ + "gene_synonym", + "hsdR" + ], + [ + "gene_synonym", + "hsp" + ], + [ + "gene_synonym", + "hsr" + ] + ], + "dna_sequence": "ATGATGAATAAATCCAATTTTGAATTCCTGAAGGGCGTCAACGACTTCACTTATGCCATCGCCTGTGCGGCGGAAAATAACTACCCGGATGATCCCAACACGACGCTGATTAAAATGCGTATGTTTGGCGAAGCCACAGCGAAACATCTTGGTCTGTTACTCAACATCCCCCCTTGTGAGAATCAACACGATCTCCTGCGTGAACTCGGCAAAATCGCCTTTGTTGATGACAACATCCTCTCTGTATTTCACAAATTACGCCGCATTGGTAACCAGGCGGTGCACGAATATCATAACGATCTCAACGATGCCCAGATGTGCCTGCGACTCGGGTTCCGCCTGGCTGTCTGGTACTACCGTCTGGTCACTAAAGATTATGACTTCCCGGTGCCGGTGTTTGTGTTGCCGGAACGTGGTGAAAACCTCTATCACCAGGAAGTGCTGACGCTAAAACAACAGCTTGAACAGCAGGTGCGAGAAAAAGCGCAGACTCAGGCAGAAGTCGAAGCGCAACAGCAGAAGCTGGTTGCCCTGAACGGCTATATCGCCATTCTGGAAGGCAAACAGCAGGAAACCGAAGCGCAAACCCAGGCTCGCCTTGCGGCACTGGAAGCACAGCTCGCCGAGAAGAACGCGGAACTGGCAAAACAGACCGAACAGGAACGTAAGGCTTACCACAAAGAAATTACCGATCAGGCCATCAAGCGCACACTCAACCTTAGCGAAGAAGAGAGTCGCTTCCTGATTGATGCGCAACTGCGTAAAGCAGGCTGGCAGGCCGACAGCAAAACCCTGCGCTTCTCCAAAGGCGCACGTCCGGAACCCGGCGTCAATAAAGCCATTGCCGAATGGCCGACCGGAAAAGATGAAACGGGTAATCAGGGCTTTGCGGATTATGTGCTGTTTGTCGGCCTCAAACCCATCGCGGTGGTAGAGGCGAAACGTAACAATATCGACGTTCCCGCCAGGCTCAATGAGTCGTATCGCTACAGTAAATGTTTCGATAATGGCTTCCTGCGGGAAACCTTGCTTGAGCACTACTCACCGGATGAAGTGCATGAAGCAGTGCCAGAGTATGAAACCAGCTGGCAGGACACCAGCGGCAAACAACGGTTTAAAATCCCCTTCTGCTACTCGACCAACGGGCGCGAATACCGCGCAACAATGAAGACCAAAAGCGGCATCTGGTATCGCGACGTGCGTGATACCCGCAATATGTCGAAAGCCTTACCCGAGTGGCACCGCCCGGAAGAGCTGCTGGAAATGCTCGGCAGCGAACCGCAAAAACAGAATCAGTGGTTTGCCGATAACCCTGGCATGAGCGAGCTGGGCCTGCGTTATTATCAGGAAGATGCCGTCCGCGCGGTTGAAAAGGCAATCGTCAAGGGGCAACAAGAGATCCTGCTGGCGATGGCGACCGGTACCGGTAAAACCCGTACGGCAATCGCCATGATGTTCCGCCTGATCCAGTCCCAGCGTTTTAAACGCATTCTCTTCCTTGTCGACCGCCGTTCTCTTGGCGAACAGGCGCTGGGCGCGTTTGAAGATACGCGTATTAACGGCGACACCTTCAACAGCATTTTCGACATTAAAGGGCTGACGGATAAATTCCCGGAAGACAGCACCAAAATTCACGTTGCCACCGTACAGTCGCTGGTGAAACGCACCCTGCAATCAGATGAACCGATGCCGGTGGCCCGTTACGACTGTATCGTCGTTGACGAAGCGCATCGCGGCTATATTCTCGATAAAGAGCAGACCGAAGGCGAACTGCAGTTCCGCAGCCAGCTGGATTACGTCTCTGCCTACCGTCGCATTCTCGATCACTTCGATGCGGTAAAAATCGCTCTCACCGCCACCCCGGCGCTACATACTGTGCAGATTTTCGGCGAGCCGGTTTACCGTTATACCTACCGTACCGCGGTTATCGACGGTTTTCTGATCGACCAGGATCCGCCTATTCAGATCATCACCCGCAACGCGCAGGAGGGGGTTTATCTCTCCAAAGGCGAGCAGGTAGAGCGCATCAGCCCGCAGGGAGAAGTGATCAATGACACCCTGGAAGACGATCAGGATTTTGAAGTCGCCGACTTTAACCGTGGCCTGGTGATCCCGGCGTTTAACCGCGCCGTCTGTAACGAACTCACCAATTATCTTGACCCGACCGGATCGCAAAAAACGCTGGTCTTCTGCGTCACCAATGCCCATGCCGATATGGTGGTGGAAGAGCTGCGTGCCGCGTTCAAGAAAAAGTATCCGCAACTGGAGCACGACGCGATCATCAAGATCACCGGTGATGCCGATAAAGACGCGCGCAAAGTGCAGACCATGATCACCCGCTTCAATAAAGAGCGGCTGCCCAATATCGTGGTAACCGTCGACCTGCTGACGACCGGCGTCGATATTCCGTCGATCTGTAATATCGTGTTCCTGCGTAAAGTACGCAGCCGCATTCTGTACGAACAGATGAAAGGCCGCGCCACGCGCTTATGCCCGGAGGTGAATAAAACCAGCTTTAAGATTTTTGACTGTGTCGATATCTACAGCACGCTGGAGAGCGTCGACACCATGCGTCCGGTGGTGGTGCGCCCGAAGGTGGAACTGCAAACGCTGGTCAATGAAATTACCGATTCAGAAACCTATAAAATCACCGAAGCGGATGGCCGCAGTTTTGCCGAGCACAGCCATGAACAACTGGTGGCGAAGCTCCAGCGTATCATCGGTCTGGCCACGTTTAACCGTGACCGCAGCGAAACGATAGATAAACAGGTGCGTCGTCTGGATGAGCTATGCCAGGACGCGGCGGGCGTGAACTTTAACGGCTTCGCCTCGCGCCTGCGGGAAAAAGGGCCGCACTGGAGCGCCGAAGTCTTTAACAAACTGCCTGGCTTTATCGCCCGTCTGGAAAAGCTGAAAACGGACATCAACAACCTGAATGATGCGCCGATCTTCCTCGATATCGACGATGAAGTGGTGAGTGTAAAATCGCTGTACGGTGATTACGACACGCCGCAGGATTTCCTCGAAGCCTTTGACTCGCTGGTGCAACGTTCCCCGAACGCGCAACCGGCATTGCAGGCAGTTATTAATCGCCCGCGCGATCTCACCCGTAAAGGGCTGGTCGAGCTACAGGAGTGGTTTGACCGCCAGCACTTTGAGGAATCTTCCCTGCGCAAAGCATGGAAAGAGACGCGCAATGAAGATATCGCCGCCCGGCTGATTGGTCATATTCGCCGCGCTGCGGTGGGCGATGCGCTGAAACCGTTTGAGGAACGTGTCGATCACGCGCTGACGCGCATTAAGGGCGAAAACGACTGGAGCAGCGAGCAATTAAGCTGGCTCGATCGTTTAGCGCAGGCGCTGAAAGAGAAAGTGGTGCTCGACGACGATGTCTTCAAAACCGGCAACTTCCACCGTCGCGGCGGGAAGGCGATGCTGCAAAGAACCTTTGACGATAATCTCGATACCCTGCTGGGCAAATTCAGCGATTATATCTGGGACGAGCTGGCCTGA", + "dna_sequence_length": 3513, + "functions": [ + "endonuclease R Type I restriction enzyme" + ], + "id": "CDS_4267", + "location": [ + [ + "NC_000913", + 4586761, + "-", + 3513 + ] + ], + "md5": "ecdf84c5255c0a24e6960ee48bc8ca45", + "parent_gene": "", + "protein_md5": "d0ccf511285d58dc53b601913fa752d4", + "protein_translation": "MMNKSNFEFLKGVNDFTYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGLLLNIPPCENQHDLLRELGKIAFVDDNILSVFHKLRRIGNQAVHEYHNDLNDAQMCLRLGFRLAVWYYRLVTKDYDFPVPVFVLPERGENLYHQEVLTLKQQLEQQVREKAQTQAEVEAQQQKLVALNGYIAILEGKQQETEAQTQARLAALEAQLAEKNAELAKQTEQERKAYHKEITDQAIKRTLNLSEEESRFLIDAQLRKAGWQADSKTLRFSKGARPEPGVNKAIAEWPTGKDETGNQGFADYVLFVGLKPIAVVEAKRNNIDVPARLNESYRYSKCFDNGFLRETLLEHYSPDEVHEAVPEYETSWQDTSGKQRFKIPFCYSTNGREYRATMKTKSGIWYRDVRDTRNMSKALPEWHRPEELLEMLGSEPQKQNQWFADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATPALHTVQIFGEPVYRYTYRTAVIDGFLIDQDPPIQIITRNAQEGVYLSKGEQVERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLDPTGSQKTLVFCVTNAHADMVVEELRAAFKKKYPQLEHDAIIKITGDADKDARKVQTMITRFNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFKIFDCVDIYSTLESVDTMRPVVVRPKVELQTLVNEITDSETYKITEADGRSFAEHSHEQLVAKLQRIIGLATFNRDRSETIDKQVRRLDELCQDAAGVNFNGFASRLREKGPHWSAEVFNKLPGFIARLEKLKTDINNLNDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDSLVQRSPNAQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRKAWKETRNEDIAARLIGHIRRAAVGDALKPFEERVDHALTRIKGENDWSSEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRRGGKAMLQRTFDDNLDTLLGKFSDYIWDELA", + "protein_translation_length": 1170, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014271" + ], + [ + "gene_synonym", + "ECK4341" + ], + [ + "gene_synonym", + "EcoGene:EG10612" + ], + [ + "gene_synonym", + "GI:16132172" + ], + [ + "gene_synonym", + "GeneID:948898" + ], + [ + "gene_synonym", + "JW4314" + ], + [ + "gene_synonym", + "NP_418771.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24202" + ], + [ + "gene_synonym", + "b4351" + ], + [ + "gene_synonym", + "mcrF" + ], + [ + "gene_synonym", + "mrr" + ] + ], + "dna_sequence": "ATGACGGTTCCTACCTATGACAAATTTATTGAACCTGTTCTGCGTTATCTGGCAACAAAACCGGAAGGTGCAGCCGCGCGTGATGTTCATGAGGCTGCCGCGGATGCATTAGGACTGGATGACAGCCAGCGAGCGAAAGTCATTACCAGCGGACAACTTGTTTATAAAAATCGTGCAGGCTGGGCGCATGACCGTTTAAAACGTGCCGGGTTGTCGCAAAGTTTGTCGCGTGGCAAATGGTGCCTGACTCCTGCGGGTTTTGACTGGGTTGCGTCTCATCCCCAGCCAATGACGGAGCAGGAGACGAACCATCTGGCCTTCGCTTTTGTGAATGTCAAACTTAAGTCACGGCCGGATGCCGTCGATTTAGATCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATGTTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAAGTTTATGTTCAGGCAAAACGTTGGCAGAATACTGTAGGCAGGCCAGAATTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAACGTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGA", + "dna_sequence_length": 915, + "functions": [ + "methylated adenine and cytosine restriction protein" + ], + "id": "CDS_4268", + "location": [ + [ + "NC_000913", + 4586949, + "+", + 915 + ] + ], + "md5": "acba34a693d1120d24a5944de183fed1", + "parent_gene": "", + "protein_md5": "bf70ee8986945f0221afa8a2145fda80", + "protein_translation": "MTVPTYDKFIEPVLRYLATKPEGAAARDVHEAAADALGLDDSQRAKVITSGQLVYKNRAGWAHDRLKRAGLSQSLSRGKWCLTPAGFDWVASHPQPMTEQETNHLAFAFVNVKLKSRPDAVDLDPKADSPDHEELAKSSPDDRLDQALKELRDAVADEVLENLLQVSPSRFEVIVLDVLHRLGYGGHRDDLQRVGGTGDGGIDGVISLDKLGLEKVYVQAKRWQNTVGRPELQAFYGALAGQKAKRGVFITTSGFTSQARDFAQSVEGMVLVDGERLVHLMIENEVGVSSRLLKVPKLDMDYFE", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014273" + ], + [ + "gene_synonym", + "ECK4342" + ], + [ + "gene_synonym", + "EcoGene:EG10021" + ], + [ + "gene_synonym", + "GI:90111738" + ], + [ + "gene_synonym", + "GeneID:948882" + ], + [ + "gene_synonym", + "JW5790" + ], + [ + "gene_synonym", + "NP_418772.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24203" + ], + [ + "gene_synonym", + "b4352" + ], + [ + "gene_synonym", + "yjiA" + ] + ], + "dna_sequence": "ATGAACCCGATTGCAGTTACCCTACTCACCGGTTTTTTAGGCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACGGCTGCATCTGTTGTTCGCGCTCCAACGAGCTGGAGGACGCGCTACTCGACCTGCTGGACAATCTCGACAAGGGCAATATTCAGTTCGACCGTCTGGTCATTGAATGCACCGGCATGGCCGATCCCGGCCCGATTATTCAGACCTTTTTCTCCCATGAAGTTTTATGCCAGCGTTATCTGCTGGACGGCGTGATTGCGCTGGTGGATGCGGTACATGCCGATGAGCAGATGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGGCGCGCATCAACGCCCGCGCACCGGTCTACACCGTCACCCACGGCGACATCGATCTGGGCCTGCTGTTCAACACCAACGGTTTTATGCTGGAAGAAAACGTCGTCAGCACCAAACCGCGTTTCCACTTTATCGCAGATAAACAAAACGATATTTCGTCGATTGTGGTGGAACTGGATTACCCGGTAGATATCAGCGAAGTTTCCCGCGTGATGGAAAACCTGCTGCTGGAGTCGGCGGATAAACTGCTACGTTACAAAGGGATGCTGTGGATTGACGGCGAACCTAACCGCCTGCTGTTCCAGGGCGTCCAGCGCCTCTACAGCGCCGACTGGGACAGGCCGTGGGGCGATGAAAAACCGCATAGCACGATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAA", + "dna_sequence_length": 957, + "functions": [ + "metal-binding GTPase" + ], + "id": "CDS_4269", + "location": [ + [ + "NC_000913", + 4588865, + "-", + 957 + ] + ], + "md5": "e4f613dfa51e26129f5e1f3675c6e1f8", + "parent_gene": "", + "protein_md5": "08af59eb182da08376042bc1a25bb8a7", + "protein_translation": "MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFIGIQLPEEEIRAAFAGLRK", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014276" + ], + [ + "gene_synonym", + "ECK4343" + ], + [ + "gene_synonym", + "EcoGene:EG12585" + ], + [ + "gene_synonym", + "GI:16132174" + ], + [ + "gene_synonym", + "GeneID:949090" + ], + [ + "gene_synonym", + "JW4316" + ], + [ + "gene_synonym", + "NP_418773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC8" + ], + [ + "gene_synonym", + "b4353" + ], + [ + "gene_synonym", + "yjiX" + ] + ], + "dna_sequence": "ATGTTTGGTAACTTAGGACAGGCAAAAAAATATCTCGGCCAGGCGGCGAAGATGTTGATTGGCATTCCAGACTACGACAACTACGTCGAGCATATGAAGACCAACCATCCCGACAAGCCGTACATGAGCTATGAAGAATTCTTCCGCGAACGCCAGAACGCGCGCTACGGCGGCGATGGTAAAGGCGGTATGCGCTGTTGTTAA", + "dna_sequence_length": 204, + "functions": [ + "DUF466 family protein" + ], + "id": "CDS_4270", + "location": [ + [ + "NC_000913", + 4589079, + "-", + 204 + ] + ], + "md5": "e68a318772c71c8fe96d1fc3bf5efa6b", + "parent_gene": "", + "protein_md5": "64ebf211c2df241d1e2cc73dd08a01e7", + "protein_translation": "MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC", + "protein_translation_length": 67, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014278" + ], + [ + "gene_synonym", + "ECK4344" + ], + [ + "gene_synonym", + "EcoGene:EG12586" + ], + [ + "gene_synonym", + "GI:90111739" + ], + [ + "gene_synonym", + "GeneID:948914" + ], + [ + "gene_synonym", + "JW5791" + ], + [ + "gene_synonym", + "NP_418774.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39396" + ], + [ + "gene_synonym", + "b4354" + ], + [ + "gene_synonym", + "oppE?" + ], + [ + "gene_synonym", + "yjiY" + ] + ], + "dna_sequence": "ATGGATACTAAAAAGATATTCAAGCACATACCCTGGGTGATTCTCGGAATCATCGGTGCATTCTGCCTCGCGGTAGTTGCATTACGTCGGGGGGAGCACATCAGCGCCCTGTGGATCGTGGTCGCCTCTGTATCGGTGTATCTGGTGGCGTATCGCTACTACAGTCTGTACATCGCCCAGAAGGTGATGAAACTCGACCCCACGCGCGCGACGCCTGCGGTTATTAACAACGACGGTCTGAACTACGTTCCGACCAACCGTTACGTGTTGTTTGGTCACCACTTCGCCGCTATCGCCGGTGCTGGTCCGCTGGTGGGTCCGGTTCTCGCCGCGCAGATGGGCTACCTGCCTGGCACGCTGTGGCTGCTGGCGGGGGTCGTGCTGGCCGGTGCGGTTCAGGACTTTATGGTGCTGTTTATCTCCTCTCGCCGTAATGGCGCATCTCTTGGTGAGATGATCAAAGAAGAGATGGGACCAGTACCGGGGACTATCGCGCTGTTTGGCTGTTTCTTAATCATGATCATCATCCTCGCCGTCCTGGCGCTGATTGTGGTTAAAGCCCTGGCCGAAAGTCCGTGGGGTGTCTTCACCGTTTGCTCAACCGTACCGATTGCGCTGTTTATGGGTATCTACATGCGCTTTATTCGTCCGGGGCGTGTGGGTGAAGTCTCTGTCATTGGTATCGTGCTGCTGGTTGCCTCTATCTACTTCGGTGGCGTGATTGCTCACGATCCGTACTGGGGTCCGGCACTGACCTTTAAAGACACCACCATTACCTTCGCGCTGATTGGCTATGCGTTTGTTTCCGCACTGCTGCCAGTGTGGCTGATCCTCGCACCGCGCGACTATCTGGCAACCTTCCTGAAAATCGGCGTTATCGTCGGCCTGGCGCTGGGTATCGTGGTGCTGAACCCGGAACTGAAAATGCCTGCCATGACCCAGTACATTGACGGTACTGGCCCGCTGTGGAAAGGCGCTCTGTTCCCGTTCCTGTTCATCACCATCGCCTGTGGTGCGGTATCTGGCTTCCACGCGCTGATCTCTTCCGGTACGACGCCAAAACTGCTGGCTAATGAAACCGACGCGCGTTTCATCGGCTACGGCGCAATGCTGATGGAGTCCTTCGTGGCGATTATGGCGCTGGTTGCTGCGTCCATCATCGAACCGGGTCTTTACTTCGCGATGAACACCCCGCCTGCTGGCCTTGGCATCACCATGCCTAACCTGCATGAAATGGGTGGCGAGAACGCGCCGATCATCATGGCGCAGCTGAAAGACGTTACCGCACACGCGGCAGCGACCGTCAGCTCCTGGGGCTTCGTGATTTCGCCAGAGCAGATCCTGCAAACCGCGAAAGACATTGGTGAGCCTTCTGTCCTGAACCGTGCAGGTGGCGCGCCGACGCTGGCGGTAGGTATCGCGCACGTGTTCCACAAAGTGCTGCCGATGGCTGACATGGGCTTCTGGTATCACTTCGGTATTCTGTTCGAAGCCCTGTTCATCCTGACCGCGCTGGATGCGGGTACCCGTTCTGGCCGCTTTATGCTGCAAGACCTGCTGGGTAACTTCATCCCGTTCCTGAAAAAAACCGATTCTCTGGTTGCCGGTATCATCGGTACTGCGGGCTGTGTGGGTCTGTGGGGCTACCTGCTGTATCAGGGCGTGGTTGATCCGCTGGGCGGCGTTAAGAGCCTGTGGCCGCTGTTCGGTATCTCCAACCAGATGCTGGCAGCCGTAGCGCTGGTACTGGGCACCGTTGTGCTGATTAAGATGAAGCGCACCCAATACATCTGGGTAACTGTTGTTCCGGCTGTATGGCTGCTTATCTGCACCACCTGGGCGCTGGGCCTGAAACTGTTCAGCACCAACCCGCAGATGGAAGGCTTCTTCTACATGGCAAGCCAGTACAAAGAGAAGATTGCTAACGGTACTGACCTGACGGCGCAGCAGATTGCCAATATGAACCACATCGTTGTGAACAACTACACCAACGCAGGTCTGAGTATTCTGTTCCTGATTGTGGTGTACAGCATCATCTTCTACGGTTTCAAAACCTGGCTTGCGGTGCGTAACAGCGACAAACGTACTGACAAAGAAACACCGTACGTTCCAATCCCGGAAGGCGGCGTGAAGATCTCTTCGCACCACTAA", + "dna_sequence_length": 2151, + "functions": [ + "putative transporter" + ], + "id": "CDS_4271", + "location": [ + [ + "NC_000913", + 4591279, + "-", + 2151 + ] + ], + "md5": "6faf939cbe917aeb2b76d89d70b94ff5", + "parent_gene": "", + "protein_md5": "27dd46188d259a7adad5de61000d36e8", + "protein_translation": "MDTKKIFKHIPWVILGIIGAFCLAVVALRRGEHISALWIVVASVSVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH", + "protein_translation_length": 716, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014282" + ], + [ + "gene_synonym", + "ECK4345" + ], + [ + "gene_synonym", + "EcoGene:EG11034" + ], + [ + "gene_synonym", + "GI:16132176" + ], + [ + "gene_synonym", + "GeneID:948884" + ], + [ + "gene_synonym", + "JW4318" + ], + [ + "gene_synonym", + "NP_418775.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02942" + ], + [ + "gene_synonym", + "b4355" + ], + [ + "gene_synonym", + "cheD" + ], + [ + "gene_synonym", + "tsr" + ] + ], + "dna_sequence": "ATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAATCGCCTGATTGACAGCATTCGTCATATTGCAGGCGGCGATCTGGTGAAACCGATTGAGGTGGATGGCTCTAATGAGATGGGGCAACTGGCAGAGAGTTTGCGCCATATGCAGGGAGAGCTGATGCGTACCGTCGGTGATGTGCGCAACGGGGCCAATGCCATCTATAGCGGTGCCAGCGAAATCGCCACCGGCAATAACGATCTCTCTTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCAACTGACCGCAACGGTGAAGCAGAACGCCGAAAATGCGCGCCAGGCCAGCCATCTGGCGTTAAGTGCTTCTGAAACGGCGCAACGCGGCGGTAAAGTGGTAGATAACGTGGTGCAGACTATGCGCGATATCTCCACCAGTTCGCAGAAAATCGCCGATATTATCAGCGTAATTGACGGCATTGCCTTCCAGACCAATATTCTGGCTTTGAACGCGGCGGTTGAGGCTGCGCGTGCGGGTGAGCAAGGGCGCGGTTTTGCGGTGGTCGCGGGAGAAGTGCGTAATCTGGCCCAGCGCAGCGCCCAGGCGGCTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAA", + "dna_sequence_length": 1656, + "functions": [ + "methyl-accepting chemotaxis protein I, serine sensor receptor" + ], + "id": "CDS_4272", + "location": [ + [ + "NC_000913", + 4591657, + "+", + 1656 + ] + ], + "md5": "20843ef460094e89ace53e47cd63f39d", + "parent_gene": "", + "protein_md5": "ef341e0061e3f93c9c7468f6d9d09ba0", + "protein_translation": "MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMESASISLKQAEKNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLHDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRLTEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF", + "protein_translation_length": 551, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014284" + ], + [ + "gene_synonym", + "ECK4346" + ], + [ + "gene_synonym", + "EcoGene:EG12588" + ], + [ + "gene_synonym", + "GI:16132177" + ], + [ + "gene_synonym", + "GeneID:948879" + ], + [ + "gene_synonym", + "JW4319" + ], + [ + "gene_synonym", + "NP_418776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39398" + ], + [ + "gene_synonym", + "b4356" + ], + [ + "gene_synonym", + "lgoT" + ], + [ + "gene_synonym", + "yjiZ" + ], + [ + "gene_synonym", + "yjjL" + ] + ], + "dna_sequence": "GTGGAAAAAGAAAATATCACCATCGATCCGCGTTCTTCATTTACTCCATCTTCGTCGGCAGATATTCCCGTGCCACCAGATGGATTAGTTCAACGCAGTACCCGAATTAAACGCATTCAAACCACCGCCATGTTGTTATTATTTTTTGCGGCGGTAATCAATTATCTCGACCGCAGTTCGCTGTCGGTAGCAAATTTAACGATTCGTGAAGAATTGGGATTAAGTGCCACCGAAATCGGCGCTTTGCTCTCCGTGTTTTCACTCGCTTACGGGATTGCGCAACTTCCTTGCGGCCCACTATTGGATCGTAAAGGCCCACGCCTGATGCTGGGACTGGGGATGTTCTTCTGGTCACTGTTCCAGGCAATGTCTGGCATGGTGCACAACTTTACGCAGTTCGTGTTGGTGCGTATCGGTATGGGGATTGGTGAAGCGCCGATGAACCCATGCGGTGTAAAAGTCATTAACGACTGGTTCAACATCAAAGAGCGCGGACGCCCGATGGGCTTCTTCAACGCAGCTTCTACCATTGGCGTTGCCGTAAGCCCACCGATTCTGGCGGCGATGATGCTGGTGATGGGCTGGCGCGGGATGTTTATTACCATTGGTGTACTGGGGATTTTTCTCGCCATCGGCTGGTATATGCTCTATCGCAACCGCGAGCACGTAGAACTGACTGCCGTTGAGCAAGCTTATCTCAATGCAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCATCAACTACACTGCGTGGCTGTATCTGGCCTGGCTTCCTGGTTACCTGCAAACAGCCTATAACCTGGATTTAAAAAGCACAGGGTTGATGGCGGCTATCCCTTTCCTGTTTGGGGCTGCCGGGATGCTGGTCAACGGTTACGTTACCGACTGGCTGGTCAAAGGGGGAATGGCTCCGATTAAAAGCCGTAAGATCTGCATTATTGCCGGGATGTTCTGTTCTGCCGCCTTTACGCTGATAGTACCACAAGCGACAACATCCATGACGGCGGTTCTGCTGATTGGCATGGCACTGTTCTGTATTCACTTTGCCGGAACATCCTGCTGGGGCTTGATCCACGTCGCAGTTGCTTCTCGCATGACTGCGTCGGTGGGCAGTATCCAGAACTTTGCCAGCTTCATCTGCGCCTCTTTTGCGCCGATCATTACTGGTTTTATTGTTGATACCACCCACTCATTCCGTCTGGCACTAATCATCTGCGGTTGCGTCACCGCAGCGGGGGCACTGGCGTACATCTTCCTGGTTCGTCAGCCGATCAACGACCCACGTAAAGATTAA", + "dna_sequence_length": 1362, + "functions": [ + "putative L-galactonate:H+ symporter" + ], + "id": "CDS_4273", + "location": [ + [ + "NC_000913", + 4594722, + "-", + 1362 + ] + ], + "md5": "2b958296dd3a24300e1fb844118345d3", + "parent_gene": "", + "protein_md5": "fbeabd7fabfb9bc29568aa3b03f8a07e", + "protein_translation": "MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD", + "protein_translation_length": 453, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014287" + ], + [ + "gene_synonym", + "ECK4347" + ], + [ + "gene_synonym", + "EcoGene:EG12589" + ], + [ + "gene_synonym", + "GI:49176497" + ], + [ + "gene_synonym", + "GeneID:948881" + ], + [ + "gene_synonym", + "JW5792" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39399" + ], + [ + "gene_synonym", + "YP_026290.1" + ], + [ + "gene_synonym", + "b4357" + ], + [ + "gene_synonym", + "lgoR" + ], + [ + "gene_synonym", + "yjjM" + ] + ], + "dna_sequence": "ATGAGTCGTTCACAAAATTTACGCCACAATGTGATTAACCAGGTCATTGATGATATGGCGCGGGGTCATATCCCTTCCCCACTTCCATCGCAAAGTGCGCTGGCGGAAATGTACAACATCAGCCGCACCACAGTGCGTCATATTCTCAGCCACTTACGCGAATGCGGCGTCTTGACGCAGGTTGGAAACGACTATGTTATTGCGCGTAAACCTGACCATGATGACGGTTTCGCCTGTACTACCGCTTCAATGAGTGAACAAAACAAAGTGTTTGAGCAGGCTTTTTTCACGATGATAAACCAGCGCCAGTTACGCCCAGGGGAAACGTTTTCTGAACTGCAACTGGCTCGGGCCGCGGGTGTCAGCCCGGTTGTAGTAAGAGAATATCTTTTAAAATTCGGCCGTTATAATCTTATTCACAGCGAAAAGCGCGGCCAGTGGAGCATGAAGCAATTCGATCAATCCTACGCCGAGCAGCTGTTTGAGCTACGCGAAATGCTCGAAACACATTCACTTCAGCACTTTCTCAACCTGCCTGATCATGATCCCCGCTGGCTGCAGGCGAAAACCATGCTCGAACGTCATCGGCTACTGCGTGACAACATCGGCAATAGCTTTCGCATGTTCTCGCAACTTGACAGAGATTTTCACTCCTTACTGCTTTCAGCTGCCGACAATATCTTTTTTGATCAATCGCTTGAGATCATCTCAGTCATCTTTCATTTTCACTATCAATGGGACGAAAGCGATCTTAAACAGCGCAATATCATTGCCGTCGATGAGCATATGACCATTCTCAGCGCTCTGATTTGCCGCAGTGACCTTGATGCCACCCTTGCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAA", + "dna_sequence_length": 915, + "functions": [ + "putative transcriptional activator for L-galactonate catabolism" + ], + "id": "CDS_4274", + "location": [ + [ + "NC_000913", + 4595851, + "-", + 915 + ] + ], + "md5": "fac0506a719e072f546658457549fbe3", + "parent_gene": "", + "protein_md5": "f982de5dbcd4b891c77e6945f9c4d0ac", + "protein_translation": "MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIHSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENTRYAH", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014294" + ], + [ + "gene_synonym", + "ECK4348" + ], + [ + "gene_synonym", + "EcoGene:EG12590" + ], + [ + "gene_synonym", + "GI:226524765" + ], + [ + "gene_synonym", + "GeneID:948883" + ], + [ + "gene_synonym", + "JW5793" + ], + [ + "gene_synonym", + "NP_418778.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39400" + ], + [ + "gene_synonym", + "b4358" + ], + [ + "gene_synonym", + "lgoD" + ], + [ + "gene_synonym", + "yjjN" + ] + ], + "dna_sequence": "ATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAACGCGAGATACCTATTCCGGGTGACAATGAAGCATTAATAAAAATTAAGTCTGTCGGGATTTGCGGTACCGATATTCATGCCTGGGGTGGAAATCAACCATTTTTTAGTTATCCACGTGTTTTAGGCCATGAAATATGTGGGGAGATTGTTGGGCTGGGTAAAAATATTGCTGATCTTAAAAATGGTCAGCAAGTTGCTGTGATCCCTTATGTTGCCTGTCAGCAATGCCCGGCGTGTAAAAGCGGGCGTACCAATTGCTGTGAAAAAATTTCAGTCATTGGCGTGCATCAGGATGGCGGTTTTAGTGAGTATTTGAGCGTGCCGGTGGCGAACATTTTGCCCGCAGACGGTATTGACCCGCAGGCGGCAGCATTGATTGAACCTTTCGCTATTAGCGCTCATGCGGTGCGTCGCGCAGCCATTGCTCCCGGCGAGCAGGTGCTGGTGGTCGGGGCGGGGCCAATCGGTCTGGGCGCGGCGGCAATCGCTAAAGCCGATGGCGCACAGGTGGTGGTGGCGGATACCAGTCCGGCGCGCCGTGAACATGTGGCAACGCGTCTGGAATTACCTTTACTGGACCCGTCAGCCGAAGATTTTGACGCGCAGCTACGGGCGCAGTTTGGTGGTTCGCTGGCGCAGAAAGTGATCGACGCGACAGGTAATCAACATGCGATGAATAACACCGTGAATTTGATTCGTCACGGCGGCACGGTGGTATTTGTCGGCCTGTTTAAAGGTGAGTTGCAGTTCTCCGATCCGGAATTCCATAAAAAAGAAACGACGATGATGGGCAGCCGCAACGCCACGCCGGAAGATTTTGCTAAAGTCGGTCGACTGATGGCGGAAGGAAAAATCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGA", + "dna_sequence_length": 1023, + "functions": [ + "L-galactonate oxidoreductase", + "L-gulonate oxidoreductase" + ], + "id": "CDS_4275", + "location": [ + [ + "NC_000913", + 4595990, + "+", + 1023 + ] + ], + "md5": "338c57dc2ab36b3bca765d560a9143bc", + "parent_gene": "", + "protein_md5": "b22520d4f94fd62d19b36ddd2670e02b", + "protein_translation": "MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVLGHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF", + "protein_translation_length": 340, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014297" + ], + [ + "gene_synonym", + "ECK4349" + ], + [ + "gene_synonym", + "EcoGene:EG12591" + ], + [ + "gene_synonym", + "GI:90111741" + ], + [ + "gene_synonym", + "GeneID:948888" + ], + [ + "gene_synonym", + "JW5794" + ], + [ + "gene_synonym", + "NP_418779.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39401" + ], + [ + "gene_synonym", + "b4359" + ], + [ + "gene_synonym", + "mdoB" + ], + [ + "gene_synonym", + "opgB" + ], + [ + "gene_synonym", + "yjjO" + ] + ], + "dna_sequence": "TTGTCAGAACTACTCTCTTTCGCCCTTTTTCTCGCCTCTGTGCTGATTTACGCATGGAAAGCGGGACGTAACACCTGGTGGTTTGCAGCCACGTTAACGGTGCTGGGGCTATTTGTCGTTTTAAATATCACCCTGTTTGCCAGCGACTATTTTACTGGCGATGGTATTAACGACGCGGTTCTCTATACCTTAACCAACAGCCTGACCGGTGCTGGCGTCAGCAAATACATTTTGCCGGGTATCGGCATTGTGCTGGGGCTGACAGCGGTGTTCGGTGCGCTGGGCTGGATCCTGCGCCGTCGTCGCCATCATCCGCACCATTTTGGTTACAGCCTGCTGGCGCTCTTACTGGCGCTGGGTTCGGTGGACGCCAGCCCGGCATTTCGTCAGATAACGGAACTGGTGAAATCCCAGTCACGCGACGGCGACCCGGACTTTGCGGCTTATTATAAAGAGCCGTCGAAAACTATCCCTGACCCGAAACTCAACCTGGTTTATATCTACGGCGAAAGTCTCGAGCGGACCTATTTTGATAACGAGGCTTTCCCGGATCTCACGCCTGAACTGGGCGCGTTGAAAAATGAAGGCCTGGATTTCAGCCACACGCAGCAGCTGCCGGGAACAGATTACACGATTGCGGGCATGGTGGCTTCTCAGTGCGGCATACCGCTGTTTGCCCCCTTTGAAGGCAACGCCTCCGCCTCTGTCTCCAGCTTCTTCCCGCAGAACATCTGTCTGGGAGATATCCTGAAAAACTCGGGTTATCAGAACTATTTCGTGCAGGGCGCGAATCTGCGTTTTGCCGGTAAAGATGTGTTCCTGAAGTCGCATGGCTTCGACCACTTATACGGCTCAGAAGAGCTGAAAAGCGTGGTAGCCGACCCGCACTATCGCAACGACTGGGGATTCTACGACGATACCGTTCTCGATGAAGCGTGGAAAAAGTTTGAAGAGCTTTCCCGCTCAGGTCAGCGATTCTCACTGTTTACCCTGACAGTCGATACCCATCACCCGGATGGTTTTATCTCTCGTACCTGTAACCGCAAAAAATATGATTTTGACGGTAAACCGAATCAGTCATTCAGCGCGGTAAGTTGCAGCCAGGAGAACATCGCGACGTTTATCAACAAAATCAAAGCGTCACCGTGGTTTAAAGATACCGTCATCGTCGTCTCTTCTGACCATTTAGCGATGAACAACACGGCGTGGAAATACCTCAATAAGCAGGATCGCAATAACCTGTTTTTTGTCATTCGTGGCGACAAGCCGCAGCAAGAGACGCTGGCAGTGAAGCGTAACACGATGGATAACGGCGCGACGGTGCTGGACATTCTCGGTGGCGATAACTATCTCGGACTTGGTCGTAGCAGTTTATCCGGGCAGTCGATGTCGGAAATCTTCCTCAATATCAAAGAGAAAACATTGGCGTGGAAGCCAGATATCATCCGCCTGTGGAAATTCCCTAAAGAGATGAAAGAGTTCACCATCGACCAGCAGAAAAACATGATTGCCTTCTCGGGTAGCCATTTCCGTTTGCCGCTGCTGTTGCGGGTTTCAGACAAACGCGTGGAACCGCTGCCGGAAAGCGAATACTCAGCACCGCTGCGTTTCCAGCTGGCCGATTTCGCTCCACGCGACAATTTCGTCTGGGTTGACCGTTGCTACAAGATGGCACAACTCTGGGCTCCGGAACTGGCACTTTCCACCGACTGGTGTGTCTCGCAAGGGCAGCTTGGCGGTCAGCAAATTGTTCAGCATGTTGACAAAACAACATGGCAGGGCAAAACGGCATTTAAAGATACGGTCATCGACATGGCGCGTTACAAAGGCAATGTCGATACGCTGAAGATTGTTGATAACGATATTCGCTACAAAGCCGACAGTTTCATCTTTAACGTCGCCGGTGCGCCAGAAGAGGTGAAACAGTTTAGCGGGATTTCCCGTCCGGAGTCGTGGGGCCGCTGGTCCAACGCGCAGCTGGGCGATGAAGTAAAAATCGAGTACAAGCATCCGCTGCCGAAGAAATTTGACCTGGTGATTACCGCCAAAGCATACGGCAATAACGCCAGCCGTCCTATTCCGGTACGCGTAGGCAATGAAGAACAAACTCTTGTGCTGGGCAATGAAGTGACCACCACCACACTGCATTTCGATAACCCAACCGATGCCGACACACTGGTAATTGTGCCGCCGGAACCTGTCTCAACCAACGAAGGGAATATCCTCGGACACTCGCCGCGTAAGCTCGGGATCGGCATGGTGGAAATTAAAGTGGTAGAACGTGAAGGGTAA", + "dna_sequence_length": 2292, + "functions": [ + "OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane-bound) and II (soluble)" + ], + "id": "CDS_4276", + "location": [ + [ + "NC_000913", + 4599441, + "-", + 2292 + ] + ], + "md5": "c5b42e446d6bd9537fcf60162b937b57", + "parent_gene": "", + "protein_md5": "71adbdc7d8bc54b5bc35848d0ddfbbd6", + "protein_translation": "MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRRHHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIATFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG", + "protein_translation_length": 763, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014301" + ], + [ + "gene_synonym", + "ECK4350" + ], + [ + "gene_synonym", + "EcoGene:EG11214" + ], + [ + "gene_synonym", + "GI:90111742" + ], + [ + "gene_synonym", + "GeneID:948887" + ], + [ + "gene_synonym", + "JW5795" + ], + [ + "gene_synonym", + "NP_418780.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18390" + ], + [ + "gene_synonym", + "b4360" + ], + [ + "gene_synonym", + "yjjA" + ] + ], + "dna_sequence": "ATGATGAAAACTGTTAAACATCTTCTGTGCTGTGCCATTGCCGCCAGCGCATTAATTTCCACCGGGGTGCATGCTGCGTCCTGGAAAGATGCGCTCTCCAGCGCCGCCAGCGAACTTGGCAACCAAAACAGCACGACACAGGAAGGCGGTTGGTCGCTCGCGTCATTAACTAACTTGCTTAGCAGCGGAAACCAGGCCTTAAGCGCAGATAACATGAACAATGCCGCAGGCATTCTGCAATACTGCGCGAAGCAAAAGCTGGCGTCGGTAACCGATGCCGAAAACATCAAGAACCAGGTGCTGGAAAAGCTGGGCCTGAACAGTGAAGAGCAAAAAGAAGACACCAACTATCTGGACGGCATTCAGGGTTTGCTGAAAACCAAAGATGGTCAGCAACTCAATCTGGATAACATCGGAACAACTCCGCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGA", + "dna_sequence_length": 495, + "functions": [ + "putative DUF2501 family periplasmic protein" + ], + "id": "CDS_4277", + "location": [ + [ + "NC_000913", + 4600189, + "-", + 495 + ] + ], + "md5": "9be11a985fc9a9e8b651d1d2234dcf02", + "parent_gene": "", + "protein_md5": "6627c6aea3c9475dae4a7d6fa188c03a", + "protein_translation": "MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014304" + ], + [ + "gene_synonym", + "ECK4351" + ], + [ + "gene_synonym", + "EcoGene:EG10237" + ], + [ + "gene_synonym", + "GI:16132182" + ], + [ + "gene_synonym", + "GeneID:948864" + ], + [ + "gene_synonym", + "JW4325" + ], + [ + "gene_synonym", + "NP_418781.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEF0" + ], + [ + "gene_synonym", + "b4361" + ], + [ + "gene_synonym", + "dnaC" + ], + [ + "gene_synonym", + "dnaD" + ] + ], + "dna_sequence": "ATGAAAAACGTTGGCGACCTGATGCAACGCCTGCAAAAAATGATGCCTGCCCATATCAAACCCGCATTCAAAACGGGTGAAGAACTACTGGCCTGGCAAAAAGAACAAGGAGCGATCCGCTCCGCCGCTCTCGAACGTGAAAATCGGGCGATGAAAATGCAGCGCACCTTTAACCGCTCCGGTATTCGTCCACTGCATCAGAACTGTTCCTTTGAGAACTATCGCGTTGAGTGTGAAGGGCAGATGAATGCGTTAAGCAAAGCGCGCCAGTATGTCGAAGAGTTTGACGGCAACATCGCCAGCTTCATCTTTTCTGGTAAGCCAGGAACCGGCAAAAACCATCTGGCGGCGGCAATCTGCAACGAGCTGCTGCTACGCGGTAAATCCGTATTGATCATCACCGTGGCCGATATTATGTCGGCGATGAAAGATACCTTCAGGAATAGCGGTACCAGCGAAGAACAACTGCTTAACGATCTGAGCAACGTTGATCTGCTGGTGATCGATGAGATCGGCGTGCAGACCGAATCGAAATACGAAAAAGTGATCATCAACCAGATCGTCGATCGCCGCTCTTCTTCCAAACGCCCAACCGGGATGCTGACCAACAGTAATATGGAAGAGATGACCAAGTTGCTGGGCGAACGCGTGATGGACCGTATGCGCCTGGGTAACAGTTTGTGGGTGATCTTCAACTGGGATAGCTACCGTAGCCGGGTAACAGGTAAAGAGTATTAA", + "dna_sequence_length": 738, + "functions": [ + "DNA biosynthesis protein" + ], + "id": "CDS_4278", + "location": [ + [ + "NC_000913", + 4600975, + "-", + 738 + ] + ], + "md5": "76758ac138b6874d5a6a9678e486a7d1", + "parent_gene": "", + "protein_md5": "3a20811860fd83fc5985fe52fc54224b", + "protein_translation": "MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRVTGKEY", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014306" + ], + [ + "gene_synonym", + "ECK4352" + ], + [ + "gene_synonym", + "EcoGene:EG10244" + ], + [ + "gene_synonym", + "GI:16132183" + ], + [ + "gene_synonym", + "GeneID:948813" + ], + [ + "gene_synonym", + "JW4326" + ], + [ + "gene_synonym", + "NP_418782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8J2" + ], + [ + "gene_synonym", + "b4362" + ], + [ + "gene_synonym", + "dnaT" + ] + ], + "dna_sequence": "ATGTCTTCCAGAGTTTTGACCCCGGACGTCGTTGGTATTGACGCCCTGGTACACGATCACCAAACCGTTCTGGCAAAAGCTGAAGGCGGTGTGGTTGCCGTATTTGCTAACAATGCCCCGGCGTTTTATGCCGTCACGCCTGCACGCCTGGCTGAACTGCTGGCGCTGGAAGAAAAGCTGGCGCGTCCGGGAAGCGATGTCGCTCTGGACGATCAACTCTATCAGGAACCGCAAGCCGCTCCCGTTGCTGTACCCATGGGGAAATTCGCCATGTATCCGGACTGGCAACCCGATGCCGATTTTATCCGCCTGGCGGCGCTATGGGGCGTGGCGCTAAGAGAGCCGGTGACCACCGAAGAACTGGCCTCATTCATTGCCTACTGGCAGGCGGAAGGTAAAGTCTTTCACCATGTGCAGTGGCAACAAAAACTGGCGCGCAGCCTGCAAATCGGTCGTGCCAGCAACGGCGGACTGCCGAAACGAGATGTGAATACGGTCAGCGAACCTGACAGCCAAATTCCACCAGGATTCAGAGGGTAA", + "dna_sequence_length": 540, + "functions": [ + "DNA biosynthesis protein (primosomal protein I)" + ], + "id": "CDS_4279", + "location": [ + [ + "NC_000913", + 4601517, + "-", + 540 + ] + ], + "md5": "d969921217176098863f86b5adf91c55", + "parent_gene": "", + "protein_md5": "fcc61c0ea47cfb1f334791ad9d324d25", + "protein_translation": "MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014310" + ], + [ + "gene_synonym", + "ECK4353" + ], + [ + "gene_synonym", + "EcoGene:EG11215" + ], + [ + "gene_synonym", + "GI:145698348" + ], + [ + "gene_synonym", + "GeneID:948811" + ], + [ + "gene_synonym", + "JW4327" + ], + [ + "gene_synonym", + "NP_418783.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD2" + ], + [ + "gene_synonym", + "b4363" + ], + [ + "gene_synonym", + "yjjB" + ] + ], + "dna_sequence": "ATGGGTGTGATCGAATTTCTGTTAGCGTTGGCGCAGGATATGATCCTCGCCGCCATTCCTGCGGTCGGCTTTGCGATGGTGTTCAACGTTCCCGTGCGGGCGTTACGCTGGTGTGCGCTGCTTGGCTCGATAGGTCATGGTTCCCGAATGATCTTGATGACCAGCGGGTTGAATATTGAGTGGTCAACCTTTATGGCTTCTATGCTGGTCGGTACCATTGGTATTCAATGGTCGCGCTGGTATCTGGCGCATCCGAAAGTGTTTACCGTGGCGGCCGTTATCCCTATGTTCCCGGGCATATCGGCTTATACCGCAATGATTTCGGCGGTAAAAATCAGCCAGTTAGGTTACAGCGAACCGTTGATGATTACCCTGTTAACCAACTTTCTTACAGCTTCATCGATTGTTGGTGCGTTATCCATCGGTCTTTCCATTCCTGGATTATGGTTGTACCGCAAGCGCCCTCGCGTATAA", + "dna_sequence_length": 474, + "functions": [ + "DUF3815 family inner membrane protein" + ], + "id": "CDS_4280", + "location": [ + [ + "NC_000913", + 4602097, + "-", + 474 + ] + ], + "md5": "63d49616ffedadc1ab9925e107bc7836", + "parent_gene": "", + "protein_md5": "81cce493566012b3367597e359c44185", + "protein_translation": "MGVIEFLLALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGSIGHGSRMILMTSGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014313" + ], + [ + "gene_synonym", + "ECK4354" + ], + [ + "gene_synonym", + "EcoGene:EG12592" + ], + [ + "gene_synonym", + "GI:90111743" + ], + [ + "gene_synonym", + "GeneID:948812" + ], + [ + "gene_synonym", + "JW5796" + ], + [ + "gene_synonym", + "NP_418784.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD5" + ], + [ + "gene_synonym", + "b4364" + ], + [ + "gene_synonym", + "yjjP" + ] + ], + "dna_sequence": "ATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCCTCACGACTGGGTCGGGCACTGGGAATGGACAGCGTCGAAAGTTCTATCTCTTCGAACGCCATAGTGCTGACAACTATTAAAGATGGGCAATGCCTGACATCGACACGTAAAAATCACGATCGCGGCATTAATATGCATGTGGTGACTGAAGTCCAGCACATTGTGATTCTTGCGGAGCATCATCTGCTGGATTACAAAGGCGTAGAGAAACGATTTAGCCAAATTCAGCCATTACGTTACCCAAGATGGCTGGTAGCCTTAATGGTTGGCCTTTCTTGCGCCTGTTTCTGTAAACTCAATAACGGTGGCTGGGATGGTGCCGTCATCACCTTCTTTGCCAGTACGACCGCGATGTATATCCGCCAGCTGCTGGCACAACGTCATCTTCATCCACAGATCAACTTTTGCCTTACCGCTTTCGCCGCCACCACCATTTCCGGATTGCTTTTGCAACTCCCCACTTTCAGCAATACCCCCACCATTGCGATGGCCGCCAGCGTTCTGCTGCTAGTGCCGGGCTTTCCGTTGATTAATGCCGTCGCCGATATGTTTAAAGGCCACATCAATACCGGACTGGCACGCTGGGCGATCGCCAGTCTGCTGACACTGGCTACCTGCGTCGGCGTAGTGATGGCACTGACGATTTGGGGGCTACGCGGATGGGTGTGA", + "dna_sequence_length": 771, + "functions": [ + "DUF1212 family inner membrane protein" + ], + "id": "CDS_4281", + "location": [ + [ + "NC_000913", + 4602858, + "-", + 771 + ] + ], + "md5": "9d0a222af0992eb15e6e0d99d915d784", + "parent_gene": "", + "protein_md5": "6949e890fc713d041a3fb4210745d3d7", + "protein_translation": "MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014322" + ], + [ + "gene_synonym", + "ECK4355" + ], + [ + "gene_synonym", + "EcoGene:EG12593" + ], + [ + "gene_synonym", + "GI:16132186" + ], + [ + "gene_synonym", + "GeneID:948896" + ], + [ + "gene_synonym", + "JW4329" + ], + [ + "gene_synonym", + "NP_418785.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD7" + ], + [ + "gene_synonym", + "b4365" + ], + [ + "gene_synonym", + "yjjQ" + ] + ], + "dna_sequence": "ATGTTGCCAGGATGCTGCAAAAATGGAATTGTTATCAGTAAAATACCTGTTATGCAAGCAGGGTTAAAAGAGGTCATGAGGACTCACTTCCCTGAATATGAAATAATATCCAGCGCCTCTGCGGAGGACCTTACCTTATTACAATTACGTCGTTCCGGATTAGTCATTGCTGATTTAGCCGGTGAAAGTGAAGATCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAG", + "dna_sequence_length": 726, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4282", + "location": [ + [ + "NC_000913", + 4603477, + "+", + 726 + ] + ], + "md5": "2646f63d67f263e87009ea4ac52ef44b", + "parent_gene": "", + "protein_md5": "66319064d61836b210e41c9ee90775ca", + "protein_translation": "MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014324" + ], + [ + "gene_synonym", + "ECK4356" + ], + [ + "gene_synonym", + "EcoGene:EG12594" + ], + [ + "gene_synonym", + "GI:345452726" + ], + [ + "gene_synonym", + "GeneID:948889" + ], + [ + "gene_synonym", + "JW5955" + ], + [ + "gene_synonym", + "NP_418786.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39404" + ], + [ + "gene_synonym", + "b4366" + ], + [ + "gene_synonym", + "bglJ" + ], + [ + "gene_synonym", + "yjjR" + ] + ], + "dna_sequence": "ATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATCAGTGGTACATTAACCAAAGCCGGACGTTAAGCCCGACGGAGAGAGAAATATTGCGCTTTATGTCGCGTGGCTACTCAATGACACAAATTGCCGAGCAGCTTAAACGCAATATCAAAACGATCCGTGCACATAAATTTAATGTGATGTCGAAACTGGGCGTCAGTTCTGACGCAGGGTTGTTGGAGGCCGCAGATATTCTGTTATGTATGCGGCATTGCGAAACAAGTAATGTGTTGCATCCCTATTAA", + "dna_sequence_length": 678, + "functions": [ + "bgl operon transcriptional activator" + ], + "id": "CDS_4283", + "location": [ + [ + "NC_000913", + 4604160, + "+", + 678 + ] + ], + "md5": "e6312ac5639170a8d4fba9c5ec4a58b8", + "parent_gene": "", + "protein_md5": "8aac247d75279091427528fb926f5683", + "protein_translation": "MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014326" + ], + [ + "gene_synonym", + "ECK4357" + ], + [ + "gene_synonym", + "EcoGene:EG12595" + ], + [ + "gene_synonym", + "GI:16132188" + ], + [ + "gene_synonym", + "GeneID:948891" + ], + [ + "gene_synonym", + "JW4331" + ], + [ + "gene_synonym", + "NP_418787.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39405" + ], + [ + "gene_synonym", + "b4367" + ], + [ + "gene_synonym", + "fhuF" + ], + [ + "gene_synonym", + "yjjS" + ] + ], + "dna_sequence": "ATGGCCTATCGTTCCGCACCGCTCTATGAAGATGTCATCTGGCGAACGCATCTCCAGCCGCAGGATCCCACGCTTGCGCAAGCCGTGCGGGCGACGATCGCAAAACATCGTGAACATTTGCTGGAGTTTATCCGCCTGGATGAACCTGCCCCACTTAACGCCATGACGCTGGCGCAATGGTCATCACCGAATGTGCTAAGTTCTCTGCTGGCGGTCTATTCCGATCATATCTATCGCAACCAACCGATGATGATCCGCGAGAACAAACCGCTGATCTCACTATGGGCACAATGGTATATCGGCCTGATGGTGCCACCATTAATGCTGGCGCTACTGACGCAGGAAAAGGCATTAGATGTGTCGCCGGAACATTTCCATGCTGAGTTTCACGAAACCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCATCGAATGGAAACGTTAATCAGCCAGGCGCTGGTTCCGGTTGTGCAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATACCGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCGCTGCGCCATGCCCTCTTTTTTGAGAAAACGCTCACGAACGGTGAAGATAATCCACTCTGGCGTACCGTGGTACTGCGCGACGGCCTGCTGGTGCGCCGCACTTGCTGCCAGCGTTATCGCTTACCGGATGTGCAGCAATGTGGCGATTGTACGCTGAAATGA", + "dna_sequence_length": 789, + "functions": [ + "ferric iron reductase involved in ferric hydroximate transport" + ], + "id": "CDS_4284", + "location": [ + [ + "NC_000913", + 4605663, + "-", + 789 + ] + ], + "md5": "b41406149404aad852d0b5af8807247d", + "parent_gene": "", + "protein_md5": "2704ed60e17f87c7a2fdff7908a32ae9", + "protein_translation": "MAYRSAPLYEDVIWRTHLQPQDPTLAQAVRATIAKHREHLLEFIRLDEPAPLNAMTLAQWSSPNVLSSLLAVYSDHIYRNQPMMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQHRMETLISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK", + "protein_translation_length": 262, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285088" + ], + [ + "gene_synonym", + "ECK4358" + ], + [ + "gene_synonym", + "EcoGene:EG13348" + ], + [ + "gene_synonym", + "GI:94541134" + ], + [ + "gene_synonym", + "GeneID:1450313" + ], + [ + "gene_synonym", + "JW5797" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P55914" + ], + [ + "gene_synonym", + "YP_588478.1" + ], + [ + "gene_synonym", + "b4567" + ], + [ + "gene_synonym", + "yjjZ" + ] + ], + "dna_sequence": "ATGTTGCAACGTACGCTGGGCAGTGGCTGGGGAGTGTTGCTGCCGGGATTGCTGATTGCAGGGCTGATGTATGCGGATTTATCGTCAGATCAGTGGCGGATTGTCATTCTGATGGGATTAGTATTGACGCCGATGATGCTGTATCACAAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGA", + "dna_sequence_length": 237, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4285", + "location": [ + [ + "NC_000913", + 4605804, + "+", + 237 + ] + ], + "md5": "578bb40d9be343af886e28b25a774284", + "parent_gene": "", + "protein_md5": "18d3a59c8ae74d442ae92f53bfd78174", + "protein_translation": "MLQRTLGSGWGVLLPGLLIAGLMYADLSSDQWRIVILMGLVLTPMMLYHKQLRHYILLPSCLALIAGIMLMIMNLNQG", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014336" + ], + [ + "gene_synonym", + "ECK4362" + ], + [ + "gene_synonym", + "EcoGene:EG12596" + ], + [ + "gene_synonym", + "GI:16132189" + ], + [ + "gene_synonym", + "GeneID:948892" + ], + [ + "gene_synonym", + "JW4333" + ], + [ + "gene_synonym", + "NP_418788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39406" + ], + [ + "gene_synonym", + "b4371" + ], + [ + "gene_synonym", + "rsmC" + ], + [ + "gene_synonym", + "yjjT" + ] + ], + "dna_sequence": "ATGTCTGCATTTACCCCGGCAAGTGAAGTCTTGCTGCGTCACAGTGATGATTTCGAACAAAGCCGTATTCTGTTTGCCGGAGACTTACAGGATGACCTGCCCGCGCGTTTAGATACCGCGGCCAGCCGTGCTCATACCCAGCAATTCCACCACTGGCAGGTATTAAGCCGCCAGATGGGGGATAACGCCCGTTTCAGTCTGGTCGCCACGGCGGATGACGTCGCAGATTGCGATACGCTGATTTACTACTGGCCGAAGAACAAACCGGAAGCCCAGTTCCAGTTGATGAATTTACTTTCTCTGCTGCCAGTGGGGACAGATATTTTTGTCGTTGGCGAGAACCGCAGCGGCGTGCGCAGCGCCGAGCAGATGCTGGCAGATTATGCGCCGTTGAATAAAGTCGACAGCGCTCGTCGCTGTGGCCTCTATTTTGGTCGTCTGGAAAAACAGCCGGTATTTGATGCGGAGAAATTCTGGGGCGAATACAGCGTCGATGGCCTGACGGTCAAAACGCTGCCTGGCGTGTTTAGCCGCGACGGTCTGGATGTCGGTAGCCAGTTGCTGCTCTCGACGTTAACTCCGCACACGAAAGGTAAAGTGCTGGATGTCGGCTGTGGCGCGGGCGTGCTTTCAGTTGCCTTTGCGCGCCATTCGCCGAAAATTCGTCTCACCTTGTGCGATGTCTCTGCCCCGGCGGTAGAAGCCAGCCGCGCAACACTTGCGGCCAACGGTGTTGAAGGTGAAGTCTTTGCCAGCAACGTCTTTTCCGAGGTGAAAGGTCGTTTTGATATGATCATCTCCAACCCGCCGTTCCACGATGGGATGCAAACCAGCCTGGATGCGGCGCAAACGCTGATTCGCGGTGCGGTGCGTCATCTTAATAGCGGCGGCGAGCTGCGAATTGTAGCGAACGCCTTCCTGCCTTATCCGGACGTGCTGGATGAGACATTTGGCTTCCACGAAGTGATCGCGCAAACAGGGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAA", + "dna_sequence_length": 1032, + "functions": [ + "16S rRNA m(2)G1207 methyltransferase, SAM-dependent" + ], + "id": "CDS_4286", + "location": [ + [ + "NC_000913", + 4607700, + "-", + 1032 + ] + ], + "md5": "19fd3f5970916c7309de8596221eba33", + "parent_gene": "", + "protein_md5": "b81ec75a547bbfc9714c0fc07e7e9f7f", + "protein_translation": "MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDAEKFWGEYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG", + "protein_translation_length": 343, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014340" + ], + [ + "gene_synonym", + "ECK4363" + ], + [ + "gene_synonym", + "EcoGene:EG11414" + ], + [ + "gene_synonym", + "GI:16132190" + ], + [ + "gene_synonym", + "GeneID:948890" + ], + [ + "gene_synonym", + "JW4334" + ], + [ + "gene_synonym", + "NP_418789.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28632" + ], + [ + "gene_synonym", + "b4372" + ], + [ + "gene_synonym", + "holD" + ] + ], + "dna_sequence": "ATGACATCCCGACGAGACTGGCAGTTACAGCAACTGGGCATTACCCAGTGGTCGCTGCGTCGCCCTGGCGCGTTGCAGGGGGAGATTGCCATTGCGATCCCGGCACACGTCCGTCTGGTGATGGTGGCAAACGATCTTCCCGCCCTGACTGATCCTTTAGTGAGCGATGTTCTGCGCGCATTAACCGTCAGCCCCGACCAGGTGCTGCAACTGACGCCAGAAAAAATCGCGATGCTGCCGCAAGGCAGTCACTGCAACAGTTGGCGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGA", + "dna_sequence_length": 414, + "functions": [ + "DNA polymerase III, psi subunit" + ], + "id": "CDS_4287", + "location": [ + [ + "NC_000913", + 4607803, + "+", + 414 + ] + ], + "md5": "42f97ab3447b85ea1b796a95c07ef345", + "parent_gene": "", + "protein_md5": "171ec41d686c0605e00aef622a540ff2", + "protein_translation": "MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014342" + ], + [ + "gene_synonym", + "ECK4364" + ], + [ + "gene_synonym", + "EcoGene:EG10850" + ], + [ + "gene_synonym", + "GI:16132191" + ], + [ + "gene_synonym", + "GeneID:948894" + ], + [ + "gene_synonym", + "JW4335" + ], + [ + "gene_synonym", + "NP_418790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A944" + ], + [ + "gene_synonym", + "b4373" + ], + [ + "gene_synonym", + "rimI" + ] + ], + "dna_sequence": "ATGAACACGATTTCTTCCCTCGAAACGACTGATTTACCGGCGGCTTACCACATTGAACAACGCGCCCACGCCTTTCCGTGGAGTGAAAAAACGTTTGCCAGCAACCAGGGCGAGCGTTATCTCAACTTTCAGTTAACGCAAAACGGCAAAATGGCGGCGTTTGCGATTACGCAAGTGGTGCTGGATGAAGCTACATTGTTCAATATTGCGGTCGATCCTGACTATCAGCGTCAGGGATTGGGAAGGGCGCTGCTGGAACATCTGATCGACGAACTGGAAAAACGCGGCGTGGCGACACTATGGCTGGAAGTCCGTGCTTCAAACGCTGCCGCCATTGCCCTGTACGAAAGTTTAGGCTTTAACGAGGCGACGATTCGCCGCAATTACTACCCCACCACGGACGGTCGCGAAGACGCCATCATCATGGCGTTGCCAATCAGTATGTAA", + "dna_sequence_length": 447, + "functions": [ + "ribosomal-protein-S18-alanine N-acetyltransferase" + ], + "id": "CDS_4288", + "location": [ + [ + "NC_000913", + 4608185, + "+", + 447 + ] + ], + "md5": "274a620e9329743c3cfd60793ef9aeaa", + "parent_gene": "", + "protein_md5": "8c23dcd724defdfc273aaee51bbabc62", + "protein_translation": "MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014344" + ], + [ + "gene_synonym", + "ECK4365" + ], + [ + "gene_synonym", + "EcoGene:EG12115" + ], + [ + "gene_synonym", + "GI:16132192" + ], + [ + "gene_synonym", + "GeneID:948899" + ], + [ + "gene_synonym", + "JW4336" + ], + [ + "gene_synonym", + "NP_418791.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8Y1" + ], + [ + "gene_synonym", + "b4374" + ], + [ + "gene_synonym", + "yjjG" + ] + ], + "dna_sequence": "ATGAAGTGGGACTGGATTTTCTTTGATGCCGATGAAACGCTGTTTACCTTTGACTCATTCACCGGCCTGCAGCGGATGTTTCTTGATTACAGCGTCACCTTTACCGCTGAAGATTTTCAGGACTATCAGGCCGTTAACAAGCCACTGTGGGTGGATTATCAAAACGGCGCGATCACTTCATTACAGCTTCAGCACGGGCGGTTTGAGAGCTGGGCCGAACGGCTGAACGTCGAGCCAGGTAAACTCAACGAAGCCTTTATTAATGCGATGGCGGAAATCTGCACGCCGCTGCCGGGCGCGGTTTCTCTGCTTAACGCCATTCGTGGCAACGCCAAAATCGGCATCATCACCAACGGCTTTAGTGCCTTGCAACAGGTGCGTCTGGAACGCACGGGCCTGCGTGATTACTTCGATTTGCTGGTGATTTCCGAAGAAGTTGGCGTTGCCAAACCGAATAAGAAAATTTTCGATTATGCGCTGGAACAGGCGGGCAATCCTGACCGTTCACGCGTGCTGATGGTTGGCGACACTGCCGAGTCCGATATTCTCGGTGGCATCAACGCCGGGCTTGCGACCTGCTGGCTGAATGCACACCATCGCGAGCAACCAGAAGGCATCGCGCCCACCTGGACCGTTTCTTCGTTGCACGAACTGGAGCAGCTCCTGTGTAAACACTGA", + "dna_sequence_length": 678, + "functions": [ + "dUMP phosphatase" + ], + "id": "CDS_4289", + "location": [ + [ + "NC_000913", + 4608646, + "+", + 678 + ] + ], + "md5": "568e73a9e7aad3d808d791f831ae85c4", + "parent_gene": "", + "protein_md5": "f0389e84b9d713597e4b99ff29cf5e7e", + "protein_translation": "MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014346" + ], + [ + "gene_synonym", + "ECK4366" + ], + [ + "gene_synonym", + "EcoGene:EG12114" + ], + [ + "gene_synonym", + "GI:16132193" + ], + [ + "gene_synonym", + "GeneID:948897" + ], + [ + "gene_synonym", + "JW5873" + ], + [ + "gene_synonym", + "NP_418792.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7I4" + ], + [ + "gene_synonym", + "b4375" + ], + [ + "gene_synonym", + "miaD" + ], + [ + "gene_synonym", + "prfC" + ], + [ + "gene_synonym", + "sra" + ], + [ + "gene_synonym", + "srb" + ], + [ + "gene_synonym", + "tos" + ] + ], + "dna_sequence": "ATGACGTTGTCTCCTTATTTGCAAGAGGTGGCGAAGCGCCGCACTTTTGCCATTATTTCTCACCCGGACGCCGGTAAGACTACCATCACCGAGAAGGTGCTGCTGTTCGGACAGGCCATTCAGACCGCCGGTACAGTAAAAGGCCGTGGTTCCAACCAGCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCTCCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACACGCCGATCCTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGTGACGAACTGGAACTGGTGAAAGGCGCGTCTAACGAGTTCGACAAAGAGCTGTTCCTTGCGGGCGAAATCACTCCGGTATTCTTCGGTACTGCGCTGGGTAACTTCGGCGTCGATCATATGTTGGATGGCCTGGTGGAGTGGGCACCTGCGCCGATGCCGCGTCAGACTGATACCCGTACCGTAGAAGCGAGCGAAGATAAATTTACCGGCTTCGTATTTAAAATTCAGGCCAACATGGACCCGAAACACCGCGACCGCGTGGCGTTTATGCGTGTGGTGTCCGGTAAATATGAAAAAGGCATGAAACTGCGCCAGGTGCGCACTGCGAAAGATGTGGTGATCTCCGACGCGCTGACCTTTATGGCGGGTGACCGTTCGCACGTTGAAGAAGCGTATCCGGGCGATATCCTCGGCCTGCACAACCACGGCACCATTCAGATCGGCGACACCTTTACCCAGGGTGAGATGATGAAGTTCACCGGTATTCCGAACTTCGCACCAGAACTGTTCCGTCGTATCCGCCTGAAAGATCCGCTGAAGCAAAAACAGCTGCTCAAAGGGCTGGTACAGCTTTCCGAAGAGGGCGCGGTGCAGGTGTTCCGTCCAATCTCCAACAACGATCTGATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGAAGCAGTGTATGAGTCAGTCAACGTTGCCACTGCCCGCTGGGTAGAATGTGCAGACGCGAAGAAATTCGAAGAGTTCAAGCGTAAGAACGAAAGCCAACTGGCGCTTGATGGCGGCGATAACCTCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAA", + "dna_sequence_length": 1590, + "functions": [ + "peptide chain release factor RF-3" + ], + "id": "CDS_4290", + "location": [ + [ + "NC_000913", + 4609414, + "+", + 1590 + ] + ], + "md5": "3a36625d994c78664c68b22074e3b79c", + "parent_gene": "", + "protein_md5": "75317e6add306fb74e1b6394237d64db", + "protein_translation": "MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH", + "protein_translation_length": 529, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014348" + ], + [ + "gene_synonym", + "ECK4367" + ], + [ + "gene_synonym", + "EcoGene:EG11391" + ], + [ + "gene_synonym", + "GI:16132194" + ], + [ + "gene_synonym", + "GeneID:948895" + ], + [ + "gene_synonym", + "JW4338" + ], + [ + "gene_synonym", + "NP_418793.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFH8" + ], + [ + "gene_synonym", + "b4376" + ], + [ + "gene_synonym", + "osmY" + ] + ], + "dna_sequence": "ATGACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCGGCTCTGCCTACGCGGAAAACAACGCGCAGACTACCAATGAAAGCGCAGGGCAAAAAGTCGATAGCTCTATGAATAAAGTCGGTAATTTCATGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTAAAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCCCAGGCCGAAGAGGCAGTGAAAGTGGCGAAAGGCGTTGAAGGGGTGACCTCTGTCAGCGACAAACTGCACGTTCGCGACGCTAAAGAAGGCTCGGTGAAGGGCTACGCGGGTGACACCGCCACCACCAGTGAAATCAAAGCCAAACTGCTGGCGGACGATATCGTCCCTTCCCGTCATGTGAAAGTTGAAACCACCGACGGCGTGGTTCAGCTCTCCGGTACCGTCGATTCTCAGGCACAAAGTGACCGTGCTGAAAGTATCGCCAAAGCGGTAGATGGTGTGAAAAGCGTTAAAAATGATCTGAAAACTAAGTAA", + "dna_sequence_length": 606, + "functions": [ + "salt-inducible putative ABC transporter periplasmic binding protein" + ], + "id": "CDS_4291", + "location": [ + [ + "NC_000913", + 4611396, + "+", + 606 + ] + ], + "md5": "8f41f4b8c9789fdb28a8455aea92419c", + "parent_gene": "", + "protein_md5": "59bd70e631fe0e3e5f6ba0e4fbdaef5d", + "protein_translation": "MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285089" + ], + [ + "gene_synonym", + "ECK4368" + ], + [ + "gene_synonym", + "EcoGene:EG14398" + ], + [ + "gene_synonym", + "GI:145698350" + ], + [ + "gene_synonym", + "GeneID:1450298" + ], + [ + "gene_synonym", + "JW5891" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2M5U1" + ], + [ + "gene_synonym", + "YP_588479.2" + ], + [ + "gene_synonym", + "b4568" + ], + [ + "gene_synonym", + "ytjA" + ] + ], + "dna_sequence": "ATGTTTCGTTGGGGCATCATATTTCTGGTTATCGCGTTAATCGCCGCCGCACTTGGGTTTGGTGGTCTGGCCGGTACCGCTGCAGGCGCAGCTAAAATTGTCTTTGTCGTCGGGATTATTCTGTTCCTGGTGAGTTTGTTCATGGGCCGAAAACGACCCTAG", + "dna_sequence_length": 162, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4292", + "location": [ + [ + "NC_000913", + 4612128, + "+", + 162 + ] + ], + "md5": "b1235d5ecff331d049321de48448c82a", + "parent_gene": "", + "protein_md5": "641b094eec9c13e543b311f76ec6fb3d", + "protein_translation": "MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP", + "protein_translation_length": 53, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014351" + ], + [ + "gene_synonym", + "ECK4369" + ], + [ + "gene_synonym", + "EcoGene:EG12597" + ], + [ + "gene_synonym", + "GI:16132195" + ], + [ + "gene_synonym", + "GeneID:948906" + ], + [ + "gene_synonym", + "JW4340" + ], + [ + "gene_synonym", + "NP_418794.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39407" + ], + [ + "gene_synonym", + "b4377" + ], + [ + "gene_synonym", + "yjjU" + ] + ], + "dna_sequence": "GTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTGGACGAATAGCTCTGGTGTGCGAAGGCGGCGGACAGCGTGGAATTTTCACGGCTGGCGTGCTGGATGAGTTTATGCGCGCGCAGTTTAATCCTTTCGATCTTTATCTCGGCACATCTGCCGGGGCGCAGAACCTCTCGGCGTTTATCTGCAATCAGCCCGGTTACGCGCGCAAAGTCATCATGCGCTATACCACAAAACGCGAATTTTTCGATCCATTGCGCTTTGTCCGTGGAGGAAATCTTATCGATCTCGACTGGCTGGTGGAGGCCACTGCAAGCCAGATGCCGTTGCAAATGGATACCGCCGCGCGGTTGTTTGACAGCGGCAAATCGTTTTATATGTGCGCCTGTCGTCAGGATGACTACGCGCCGAATTACTTTTTACCAACCAAACAAAACTGGCTGGATGTGATTCGCGCCTCCAGTGCGATACCTGGCTTTTATCGTAGCGGAGTGTCGCTGGAAGGCATTAACTACCTGGATGGCGGGATCAGTGATGCGATTCCGGTTAAAGAGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATTCGCACTGTGCCGTCACAAATGTACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACATTTAACAATGAGGATCTGGCTTGA", + "dna_sequence_length": 1074, + "functions": [ + "putative patatin-like family phospholipase" + ], + "id": "CDS_4293", + "location": [ + [ + "NC_000913", + 4612411, + "+", + 1074 + ] + ], + "md5": "c605220ffd8bfcd65633049bb71d06b9", + "parent_gene": "", + "protein_md5": "d9140d4ffc1e6dd5b94632a5d324d5a7", + "protein_translation": "MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA", + "protein_translation_length": 357, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014356" + ], + [ + "gene_synonym", + "ECK4370" + ], + [ + "gene_synonym", + "EcoGene:EG12598" + ], + [ + "gene_synonym", + "GI:90111745" + ], + [ + "gene_synonym", + "GeneID:2847741" + ], + [ + "gene_synonym", + "JW4341" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39408" + ], + [ + "gene_synonym", + "YP_026291.2" + ], + [ + "gene_synonym", + "b4378" + ], + [ + "gene_synonym", + "yjjV" + ] + ], + "dna_sequence": "TTGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCATCCTGGTATGTTGGAAAAACATAGCGATGTGTCTCTTGAGCAGCTACAGCAGGCGCTGGAAAGGCGTCCGGCGAAGGTGGTGGCGGTGGGGGAGATCGGTCTGGATCTCTTTGGCGACGATCCGCAATTTGAGAGGCAGCAGTGGTTACTCGACGAACAACTGAAACTGGCGAAACGCTACGATCTGCCGGTGATCCTGCATTCACGGCGCACGCACGACAAACTGGCGATGCATCTTAAACGCCACGATTTACCGCGCACTGGCGTGGTTCACGGTTTTTCCGGCAGCCTGCAACAGGCCGAACGGTTTGTACAGCTGGGCTACAAAATTGGCGTAGGCGGTACTATCACCTATCCACGCGCCAGTAAAACCCGCGATGTCATCGCAAAATTACCGCTGGCATCGTTATTGCTGGAAACCGACGCGCCGGATATGCCGCTCAACGGTTTTCAGGGGCAGCCTAACCGCCCGGAGCAGGCTGCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAG", + "dna_sequence_length": 780, + "functions": [ + "putative DNase" + ], + "id": "CDS_4294", + "location": [ + [ + "NC_000913", + 4613481, + "+", + 780 + ] + ], + "md5": "e8fc173722f9090cecab594e0326a06d", + "parent_gene": "", + "protein_md5": "957eba51673707bef346d48959c876ee", + "protein_translation": "MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014359" + ], + [ + "gene_synonym", + "ECK4371" + ], + [ + "gene_synonym", + "EcoGene:EG12599" + ], + [ + "gene_synonym", + "GI:16132196" + ], + [ + "gene_synonym", + "GeneID:948905" + ], + [ + "gene_synonym", + "JW4342" + ], + [ + "gene_synonym", + "NP_418796.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39409" + ], + [ + "gene_synonym", + "b4379" + ], + [ + "gene_synonym", + "yjjW" + ] + ], + "dna_sequence": "ATGAACAGCAGATGCGCTTTAGTCAGTAAGATTATCCCCTTCTCCTGCGTTGACGGGCCAGGCAGTCGTCTGGCTCTGTTTTTGCAGGGCTGCAATCTGCGCTGCAAAAACTGTCACAATCCGTGGACGATGGGACGTTGCAATGACTGTGGGGAGTGCGTGCCACAGTGTCCGCATCAGGCGTTGCAGATTGTTGACGGCAAAGTGGTGTGGAACGCTGTGGTTTGCGAGCAGTGTGATACCTGCCTGAAGAGGTGTCCGCAACATGCCACGCCCATGGCGCAATCCATGAGCGTGGACGAAGTGCTTAGCCATGTCCGCAAAGCAGTGCTGTTTATCGAAGGGATAACGGTGAGTGGCGGTGAAGCCACGACCCAGCTGCCGTTTGTGGTGGCGCTGTTTACTGCTATCAAAAACGATCCGCAACTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGATTAAGCGCAGCATCTATTTGCTGGCAGAGCGCGGCAAGCTGGCGGAACTGCGTTTGCTGGTGATCCCTGGCCAGGTGGATTATTTGCAACACATCGAAGAACTGGCGGCGTTTATCAAGGGACTCGGCGATGTTCCGGTACGCCTGAACGCGTTTCATGCCCACGGCGTGTATGGCGAGGCGCAAAGCTGGGCGAGCGCCACGCCGGAAGACGTTGAGCCGTTGGCTGATGCGTTAAAGGTGCGCGGGGTGAGCCGGTTGATATTTCCGGCGCTCTATTTGTGA", + "dna_sequence_length": 864, + "functions": [ + "putative pyruvate formate lyase activating enzyme" + ], + "id": "CDS_4295", + "location": [ + [ + "NC_000913", + 4615543, + "-", + 864 + ] + ], + "md5": "143dd92b2447084507d5f35ae3d27d0c", + "parent_gene": "", + "protein_md5": "ada089347979bae80e6dda0dcd6c36f5", + "protein_translation": "MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSVDEVLSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSIYLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFPALYL", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014361" + ], + [ + "gene_synonym", + "ECK4372" + ], + [ + "gene_synonym", + "EcoGene:EG12171" + ], + [ + "gene_synonym", + "GI:16132197" + ], + [ + "gene_synonym", + "GeneID:948904" + ], + [ + "gene_synonym", + "JW4343" + ], + [ + "gene_synonym", + "NP_418797.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37342" + ], + [ + "gene_synonym", + "b4380" + ], + [ + "gene_synonym", + "yjjH" + ], + [ + "gene_synonym", + "yjjI" + ] + ], + "dna_sequence": "ATGCCCACTTCTCATGAAAATGCACTGCAACAACGTTGCCAGCAAATTGTCACCAGCCCAGTGCTTAGCCCGGAGCAGAAGCGCCATTTTCTGGCACTGGAAGCAGAAAACAATCTGCCTTACCCACAGCTTCCTGCCGAAGCCCGCCGCGCGCTGGATGAAGGTGTAATCTGCGATATGTTTGAAGGTCATGCGCCGTACAAACCGCGCTATGTCTTACCCGATTACGCCCGTTTTCTGGCGAACGGTTCCGAATGGCTGGAGCTGGAAGGCGCGAAAGATCTTGATGACGCACTCTCTCTGCTGACCATTCTTTACCACCACGTACCGTCGGTCACATCGATGCCGGTCTACCTGGGGCAACTGGATGCGTTGTTGCAACCGTATGTTAGAATTCTAACACAAGACGAGATCGATGTTCGAATAAAACGTTTCTGGCGTTACCTCGACAGAACCCTGCCAGACGCCTTTATGCACGCCAATATCGGCCCGTCTGATTCGCCCATTACCCGCGCGATCTTACGTGCAGATGCAGAGTTGAAGCAGGTTTCACCGAACCTGACCTTTATCTACGATCCTGAAATCACCCCTGATGACCTGCTGCTGGAAGTGGCGAAGAACATCTGTGAATGTAGCAAACCGCACATCGCCAACGGTCCGGTGCATGATAAAATTTTCACAAAAGGGGGCTACGGGATTGTGAGCTGTTACAACTCACTGCCGCTGGCGGGTGGTGGCAGCACGCTGGTACGCCTTAACCTGAAAGCCATTGCCGAGCGCAGCGAATCGCTGGATGACTTCTTTACGCGCACTCTACCGCACTACTGCCAGCAGCAGATCGCCATCATCGATGCGCGGTGTGAATTCCTCTATCAACAATCACACTTCTTTGAGAATAGCTTCCTGGTGAAAGAAGGGCTGATTAACCCTGAACGTTTTGTGCCAATGTTTGGCATGTATGGGCTGGCGGAAGCGGTTAACTTGCTGTGTGAAAAAGAAGGGATTGCCGCGCGCTACGGTAAAGAAGCCGCCGCAAATGAAGTAGGTTATCGCATCAGCGCGCAACTGGCGGAGTTTGTCGCCAATACCCCCGTGAAATATGGCTGGCAAAAACGCGCCATGTTACACGCACAGTCGGGGATCAGTTCCGATATCGGCACCACGCCGGGCGCGCGTTTGCCGTATGGCGATGAGCCAGATCCGATCACCCATCTGCAAACTGTCGCCCCGCATCATGCTTATTATTATTCCGGCATCAGCGACATTCTGACGCTCGACGAAACCATCAAACGTAACCCGCAGGCACTGGTACAGCTTTGCCTCGGTGCCTTTAAAGCCGGAATGCGTGAATTTACCGCCAATGTCAGCGGTAACGATCTGGTTCGCGTTACCGGTTATATGGTGCGTTTGTCGGATTTAGAAAAATATCGCGCCGAAGGTTCACGCACCAACACCACCTGGCTGGGCGAAGAAGCCGCACGCAACACTCGTATTCTGGAACGCCAGCCGCGCGTGATAAGCCATGAACAGCAGATGCGCTTTAGTCAGTAA", + "dna_sequence_length": 1551, + "functions": [ + "DUF3029 family protein, putative glycine radical enzyme" + ], + "id": "CDS_4296", + "location": [ + [ + "NC_000913", + 4617065, + "-", + 1551 + ] + ], + "md5": "401766deaa100f3bd03019468d050cce", + "parent_gene": "", + "protein_md5": "c44f33bc2a0e3689851126cc9d92b98d", + "protein_translation": "MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ", + "protein_translation_length": 516, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014371" + ], + [ + "gene_synonym", + "ECK4373" + ], + [ + "gene_synonym", + "EcoGene:EG10221" + ], + [ + "gene_synonym", + "GI:16132198" + ], + [ + "gene_synonym", + "GeneID:948902" + ], + [ + "gene_synonym", + "JW4344" + ], + [ + "gene_synonym", + "NP_418798.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6L0" + ], + [ + "gene_synonym", + "b4381" + ], + [ + "gene_synonym", + "deoC" + ], + [ + "gene_synonym", + "dra" + ], + [ + "gene_synonym", + "thyR" + ], + [ + "gene_synonym", + "tlr" + ] + ], + "dna_sequence": "ATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGACCTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTGAAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACGCCGGAAAGCGCGCGCATCATGATGGAAGTGATCCGTGATATGGGCGTAGAAAAAACCGTTGGTTTCAAACCGGCGGGCGGCGTGCGTACTGCGGAAGATGCGCAGAAATATCTCGCCATTGCAGATGAACTGTTCGGTGCTGACTGGGCAGATGCGCGTCACTACCGCTTTGGCGCTTCCAGCCTGCTGGCAAGCCTGCTGAAAGCGCTGGGTCACGGCGACGGTAAGAGCGCCAGCAGCTACTAA", + "dna_sequence_length": 780, + "functions": [ + "2-deoxyribose-5-phosphate aldolase, NAD(P)-linked" + ], + "id": "CDS_4297", + "location": [ + [ + "NC_000913", + 4617323, + "+", + 780 + ] + ], + "md5": "57bae629587bd788733d6fe18d7beb2e", + "parent_gene": "", + "protein_md5": "55ea46e6b9c609e5e34370717064842e", + "protein_translation": "MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014374" + ], + [ + "gene_synonym", + "ECK4374" + ], + [ + "gene_synonym", + "EcoGene:EG10219" + ], + [ + "gene_synonym", + "GI:16132199" + ], + [ + "gene_synonym", + "GeneID:948901" + ], + [ + "gene_synonym", + "JW4345" + ], + [ + "gene_synonym", + "NP_418799.1" + ], + [ + "gene_synonym", + "TP" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07650" + ], + [ + "gene_synonym", + "b4382" + ], + [ + "gene_synonym", + "deoA" + ], + [ + "gene_synonym", + "tpp" + ], + [ + "gene_synonym", + "ttg" + ] + ], + "dna_sequence": "TTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGTATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACACTCCACCGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGGTACGCTCGACAAACTGGAATCCATCCCTGGCTTCGACATTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCGATTATCGGTCAGACCAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCGTGGACTCCATCCCGCTGATCACCGCCTCTATTCTGGCGAAGAAACTTGCGGAAGGTCTGGACGCGCTGGTGATGGACGTGAAAGTGGGTAGCGGCGCGTTTATGCCGACCTACGAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGACGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCACGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCGACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAA", + "dna_sequence_length": 1323, + "functions": [ + "thymidine phosphorylase" + ], + "id": "CDS_4298", + "location": [ + [ + "NC_000913", + 4618229, + "+", + 1323 + ] + ], + "md5": "b64fabd6528066c067780cd24b131056", + "parent_gene": "", + "protein_md5": "1ecf1123362ce5c42234eb46e078ae1c", + "protein_translation": "MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENNWQEAAKAVKAAIKLADKAPESTPTVYRRISE", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014377" + ], + [ + "gene_synonym", + "ECK4375" + ], + [ + "gene_synonym", + "EcoGene:EG10220" + ], + [ + "gene_synonym", + "GI:16132200" + ], + [ + "gene_synonym", + "GeneID:948910" + ], + [ + "gene_synonym", + "JW4346" + ], + [ + "gene_synonym", + "NP_418800.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6K6" + ], + [ + "gene_synonym", + "b4383" + ], + [ + "gene_synonym", + "deoB" + ], + [ + "gene_synonym", + "drm" + ], + [ + "gene_synonym", + "thyR" + ], + [ + "gene_synonym", + "tlr" + ] + ], + "dna_sequence": "ATGAAACGTGCATTTATTATGGTGCTGGACTCATTCGGCATCGGCGCTACAGAAGATGCAGAACGCTTTGGTGACGTCGGGGCTGACACCCTGGGTCATATCGCAGAAGCTTGTGCCAAAGGCGAAGCTGATAACGGTCGTAAAGGCCCGCTCAATCTGCCAAATCTGACCCGTCTGGGGCTGGCGAAAGCACACGAAGGTTCTACCGGTTTCATTCCGGCGGGAATGGACGGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTGAGTGGGGATATTTCTCCGATCACGAAAACAGCTTCCCGCAAGAGCTGCTGGATAAACTGGTCGAACGCGCTAATCTGCCGGGTTACCTCGGTAACTGCCACTCTTCCGGTACGGTCATTCTGGATCAACTGGGCGAAGAGCACATGAAAACCGGCAAGCCGATTTTCTATACCTCCGCTGACTCCGTGTTCCAGATTGCCTGCCATGAAGAAACTTTCGGTCTGGATAAACTCTACGAACTGTGCGAAATCGCCCGTGAAGAGCTGACCAACGGCGGCTACAATATCGGTCGTGTTATCGCTCGTCCGTTTATCGGCGACAAAGCCGGTAACTTCCAGCGTACCGGTAACCGTCACGACCTGGCTGTTGAGCCGCCAGCACCGACCGTGCTGCAGAAACTGGTTGATGAAAAACACGGCCAGGTGGTTTCTGTCGGTAAAATTGCGGACATCTACGCCAACTGCGGTATCACCAAAAAAGTGAAAGCGACTGGCCTGGACGCGCTGTTTGACGCCACCATCAAAGAGATGAAAGAAGCGGGTGATAACACCATCGTCTTCACCAACTTCGTTGACTTCGACTCTTCCTGGGGCCACCGTCGCGACGTCGCCGGTTATGCCGCGGGTCTGGAACTGTTCGACCGCCGTCTGCCGGAGCTGATGTCTCTGCTGCGCGATGACGACATCCTGATCCTCACCGCTGACCACGGTTGCGATCCGACCTGGACCGGTACTGACCACACGCGTGAACACATTCCGGTACTGGTATATGGCCCGAAAGTAAAACCGGGCTCACTGGGTCATCGTGAAACCTTCGCGGATATCGGCCAGACTCTGGCAAAATATTTTGGTACTTCTGATATGGAATATGGCAAAGCCATGTTCTGA", + "dna_sequence_length": 1224, + "functions": [ + "phosphopentomutase" + ], + "id": "CDS_4299", + "location": [ + [ + "NC_000913", + 4619603, + "+", + 1224 + ] + ], + "md5": "270cf44fc2a277fc4c34cdc6407421f0", + "parent_gene": "", + "protein_md5": "12c49188e28038b39c9508073edea871", + "protein_translation": "MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF", + "protein_translation_length": 407, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014379" + ], + [ + "gene_synonym", + "ECK4376" + ], + [ + "gene_synonym", + "EcoGene:EG10222" + ], + [ + "gene_synonym", + "GI:16132201" + ], + [ + "gene_synonym", + "GeneID:945654" + ], + [ + "gene_synonym", + "JW4347" + ], + [ + "gene_synonym", + "NP_418801.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABP8" + ], + [ + "gene_synonym", + "b4384" + ], + [ + "gene_synonym", + "deoD" + ], + [ + "gene_synonym", + "pup" + ] + ], + "dna_sequence": "ATGGCTACCCCACACATTAATGCAGAAATGGGCGATTTCGCTGACGTAGTTTTGATGCCAGGCGACCCGCTGCGTGCGAAGTATATTGCTGAAACTTTCCTTGAAGATGCCCGTGAAGTGAACAACGTTCGCGGTATGCTGGGCTTCACCGGTACTTACAAAGGCCGCAAAATTTCCGTAATGGGTCACGGTATGGGTATCCCGTCCTGCTCCATCTACACCAAAGAACTGATCACCGATTTCGGCGTGAAGAAAATTATCCGCGTGGGTTCCTGTGGCGCAGTTCTGCCGCACGTAAAACTGCGCGACGTCGTTATCGGTATGGGTGCCTGCACCGATTCCAAAGTTAACCGCATCCGTTTTAAAGACCATGACTTTGCCGCTATCGCTGACTTCGACATGGTGCGTAACGCAGTAGATGCAGCTAAAGCACTGGGTATTGATGCTCGCGTGGGTAACCTGTTCTCCGCTGACCTGTTCTACTCTCCGGACGGCGAAATGTTCGACGTGATGGAAAAATACGGCATTCTCGGCGTGGAAATGGAAGCGGCTGGTATCTACGGCGTCGCTGCAGAATTTGGCGCGAAAGCCCTGACCATCTGCACCGTATCTGACCACATCCGCACTCACGAGCAGACCACTGCCGCTGAGCGTCAGACTACCTTCAACGACATGATCAAAATCGCACTGGAATCCGTTCTGCTGGGCGATAAAGAGTAA", + "dna_sequence_length": 720, + "functions": [ + "purine nucleoside phosphorylase 1", + "nicotinamide 1-beta-D-riboside phosphorylase" + ], + "id": "CDS_4300", + "location": [ + [ + "NC_000913", + 4620883, + "+", + 720 + ] + ], + "md5": "f2094031c934115d920e6970e5a546b8", + "parent_gene": "", + "protein_md5": "11a22032f6951d841446133a246dcd2f", + "protein_translation": "MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014383" + ], + [ + "gene_synonym", + "ECK4377" + ], + [ + "gene_synonym", + "EcoGene:EG12342" + ], + [ + "gene_synonym", + "GI:16132202" + ], + [ + "gene_synonym", + "GeneID:944883" + ], + [ + "gene_synonym", + "JW4348" + ], + [ + "gene_synonym", + "NP_418802.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39410" + ], + [ + "gene_synonym", + "b4385" + ], + [ + "gene_synonym", + "yjjJ" + ] + ], + "dna_sequence": "ATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTTGGTCGGGGAGGGGAATTATCAGCGATGGATTACTGCACAACACCCTGCGGAAATTCCTCTGGATCAAAAACTCACCCATTACGAACAGCTGGCAAGTGATGCACTGGCAGGAGAAATTGTGGGTTCTTCTGCGGGCGGCGAGCAGCCAAAATTTACCTACTATGCACAAACGCCGTCAGGCAATAAACATGTGTTGGTGAAATTCACCGTACCACAGCAAACCGCGGTCAGCCAACGTTGGGGTGACCTGCTAATTGCTGAATCTATTGCCGCGCAAATCCTGCGTGACGGTGGGATCCACGCCATCGAGTCAACGGTGCTTGTAACAAGTAACAGGCAGGTATTCCTCGAAGCGGAACGCTTTGACTGCAAAGGTAACGATGGTCGCTTGCCTATTGTGTCGCTGGAGGCGGTGCAGAGTGAGTTTATCTCTTCTCCGGGATCGTGGCCGCAGGCAATGCGCCGTTTGTGTGAGCAACAACTTGTCACTCACCAGAGCGTGGCGCAAACAGAAGTGATCTGGGCATTTGGGCGACTTATCGCCAACAGCGATATGCACGCAGGTAATTTATCGTTTTATTTATCTGAACCGCCATTTGCGCTGACGCCCGTCTACGACATGCTGCCGATGGTCTATGCACCAAACAGCGCTGGAATGCTGCGTGATGCTGCCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAA", + "dna_sequence_length": 1332, + "functions": [ + "putative protein kinase" + ], + "id": "CDS_4301", + "location": [ + [ + "NC_000913", + 4621769, + "+", + 1332 + ] + ], + "md5": "3c90cf68cabebc7b0fa317a820da8ba7", + "parent_gene": "", + "protein_md5": "5655a9af257d4623bc23e22b2ac2589c", + "protein_translation": "MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDTGKAHKFADIRLCWPQGSCLVTGADGDEQWFDGLPWYLTDLRPQGFLGRAWGRKLAAQLNLTDDIRLWQEEDVLYALTVFNGEYTGGWLVGEGNYQRWITAQHPAEIPLDQKLTHYEQLASDALAGEIVGSSAGGEQPKFTYYAQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILRDGGIHAIESTVLVTSNRQVFLEAERFDCKGNDGRLPIVSLEAVQSEFISSPGSWPQAMRRLCEQQLVTHQSVAQTEVIWAFGRLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMVYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQTVARDPRISEAFRHIAQEMPEKIRQIEEKVARMGG", + "protein_translation_length": 443, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014385" + ], + [ + "gene_synonym", + "ECK4378" + ], + [ + "gene_synonym", + "EcoGene:EG11796" + ], + [ + "gene_synonym", + "GI:16132203" + ], + [ + "gene_synonym", + "GeneID:944865" + ], + [ + "gene_synonym", + "JW4349" + ], + [ + "gene_synonym", + "NP_418803.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32099" + ], + [ + "gene_synonym", + "b4386" + ], + [ + "gene_synonym", + "lplA" + ], + [ + "gene_synonym", + "slr" + ], + [ + "gene_synonym", + "yjjF" + ] + ], + "dna_sequence": "ATGTCCACATTACGCCTGCTCATCTCTGACTCTTACGACCCGTGGTTTAACCTGGCGGTGGAAGAGTGTATTTTTCGCCAAATGCCCGCCACGCAGCGCGTTCTGTTTCTCTGGCGCAATGCCGACACGGTAGTAATTGGTCGCGCGCAGAACCCGTGGAAAGAGTGTAATACCCGGCGGATGGAAGAAGATAACGTCCGCCTGGCGCGGCGCAGTAGCGGTGGCGGCGCGGTGTTCCACGATCTCGGCAATACCTGCTTTACCTTTATGGCTGGCAAGCCGGAGTACGATAAAACTATCTCCACGTCGATTGTGCTCAATGCGCTGAACGCGCTCGGCGTCAGCGCCGAAGCGTCCGGACGTAACGATCTGGTGGTGAAAACCGTCGAAGGCGACCGCAAAGTCTCAGGCTCGGCCTATCGCGAAACCAAAGATCGCGGCTTCCACCACGGCACCTTGCTACTCAATGCCGACCTCAGCCGCCTGGCAAACTATCTCAATCCGGATAAAAAGAAACTGGCGGCGAAAGGCATTACGTCGGTACGTTCCCGCGTGACCAACCTCACCGAGCTGTTGCCGGGGATCACCCATGAGCAGGTTTGCGAGGCCATAACCGAGGCCTTTTTCGCCCATTATGGCGAGCGCGTGGAAGCGGAAATCATCTCCCCGAACAAAACGCCAGACTTGCCAAACTTCGCCGAAACCTTTGCCCGCCAGAGTAGCTGGGAATGGAACTTCGGTCAGGCTCCGGCATTCTCGCATCTGCTGGATGAACGCTTTACCTGGGGCGGCGTGGAACTGCATTTCGACGTTGAAAAAGGCCATATCACCCGCGCCCAGGTGTTTACCGACAGCCTCAACCCCGCGCCGCTGGAAGCCCTCGCCGGACGACTGCAAGGCTGCCTGTACCGCGCAGATATGCTGCAACAGGAGTGCGAAGCGCTGTTGGTTGACTTCCCGGAACAGGAAAAAGAGCTACGGGAGTTATCGGCATGGATGGCGGGGGCTGTAAGGTAG", + "dna_sequence_length": 1017, + "functions": [ + "lipoate-protein ligase A" + ], + "id": "CDS_4302", + "location": [ + [ + "NC_000913", + 4624117, + "-", + 1017 + ] + ], + "md5": "c10e476bbccab7943b70a0ecaf499d0a", + "parent_gene": "", + "protein_md5": "9cda00b95bfa5c8d32f0b70e58afbcb2", + "protein_translation": "MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAGAVR", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014387" + ], + [ + "gene_synonym", + "ECK4379" + ], + [ + "gene_synonym", + "EcoGene:EG10951" + ], + [ + "gene_synonym", + "GI:16132204" + ], + [ + "gene_synonym", + "GeneID:946089" + ], + [ + "gene_synonym", + "JW4350" + ], + [ + "gene_synonym", + "NP_418804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC7" + ], + [ + "gene_synonym", + "b4387" + ], + [ + "gene_synonym", + "smp" + ], + [ + "gene_synonym", + "ytjB" + ] + ], + "dna_sequence": "ATGGCTCGCACAAAACTGAAATTCCGGCTGCATCGGGCAGTGATTGTCCTGTTCTGTCTTGCCTTGTTAGTGGCGCTGATGCAGGGAGCGTCATGGTTTAGTCAAAACCACCAGCGACAGCGTAATCCACAGCTGGAAGAACTGGCCCGCACCCTGGCGCGTCAGGTGACGCTGAACGTTGCACCGCTGATGCGTACCGACTCACCGGATGAAAAACGCATTCAGGCGATCCTCGATCAGTTAACGGATGAAAGCCGTATCCTCGACGCGGGTGTGTATGACGAACAAGGCGATCTTATCGCACGTTCTGGCGAAAGCGTCGAAGTGCGCGACCGGCTGGCGCTCGACGGTAAAAAAGCAGGCGGCTATTTTAACCAGCAGATTGTCGAGCCAATTGCGGGTAAAAACGGACCGCTCGGCTATCTGCGCCTGACACTCGACACCCATACGCTCGCCACCGAAGCCCAACAGGTGGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCCAGCAAACCGGTGCCGGAAGAGGAAGAAAGCGAGAAAAAAGAGTGA", + "dna_sequence_length": 645, + "functions": [ + "SMP_2 family putative membrane-anchored periplasmic protein" + ], + "id": "CDS_4303", + "location": [ + [ + "NC_000913", + 4624789, + "-", + 645 + ] + ], + "md5": "6a5de82b1a8123b73f8049285bb0d1b7", + "parent_gene": "", + "protein_md5": "298a94e68b859667f2f6e80c04f005b7", + "protein_translation": "MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE", + "protein_translation_length": 214, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014393" + ], + [ + "gene_synonym", + "ECK4380" + ], + [ + "gene_synonym", + "EcoGene:EG10945" + ], + [ + "gene_synonym", + "GI:16132205" + ], + [ + "gene_synonym", + "GeneID:948913" + ], + [ + "gene_synonym", + "JW4351" + ], + [ + "gene_synonym", + "NP_418805.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGB0" + ], + [ + "gene_synonym", + "b4388" + ], + [ + "gene_synonym", + "serB" + ] + ], + "dna_sequence": "ATGCCTAACATTACCTGGTGCGACCTGCCTGAAGATGTCTCTTTATGGCCGGGTCTGCCTCTTTCATTAAGTGGTGATGAAGTGATGCCACTGGATTACCACGCAGGTCGTAGCGGCTGGCTGCTGTATGGTCGTGGGCTGGATAAACAACGTCTGACCCAATACCAGAGCAAACTGGGTGCGGCGATGGTGATTGTTGCCGCCTGGTGCGTGGAAGATTATCAGGTGATTCGTCTGGCAGGTTCACTCACCGCACGGGCTACACGCCTGGCCCACGAAGCGCAGCTGGATGTCGCCCCGCTGGGGAAAATCCCGCACCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCGGAAGTAACCGAACGGGCGATGCGCGGCGAACTCGATTTTACCGCCAGCCTGCGCAGCCGTGTGGCGACGCTGAAAGGCGCTGACGCCAATATTCTGCAACAGGTGCGTGAAAATCTGCCGCTGATGCCAGGCTTAACGCAACTGGTGCTCAAGCTGGAAACGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCAATGTGATCGGCGACATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGGATTGCCTACCATGCCAAGCCAAAAGTGAATGAAAAGGCGGAAGTCACCATCCGTCACGCTGACCTGATGGGGGTATTCTGCATCCTCTCAGGCAGCCTGAATCAGAAGTAA", + "dna_sequence_length": 969, + "functions": [ + "3-phosphoserine phosphatase" + ], + "id": "CDS_4304", + "location": [ + [ + "NC_000913", + 4624895, + "+", + 969 + ] + ], + "md5": "3ccb74aa3c64e2b58a0f18ec62671577", + "parent_gene": "", + "protein_md5": "d7cfd88177bda29164d71217f3bdd681", + "protein_translation": "MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK", + "protein_translation_length": 322, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014395" + ], + [ + "gene_synonym", + "ECK4381" + ], + [ + "gene_synonym", + "EcoGene:EG11296" + ], + [ + "gene_synonym", + "GI:16132206" + ], + [ + "gene_synonym", + "GeneID:948912" + ], + [ + "gene_synonym", + "JW4352" + ], + [ + "gene_synonym", + "NP_418806.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24554" + ], + [ + "gene_synonym", + "b4389" + ], + [ + "gene_synonym", + "radA" + ], + [ + "gene_synonym", + "sms" + ] + ], + "dna_sequence": "GTGGCAAAAGCTCCAAAACGCGCCTTTGTTTGTAATGAATGCGGGGCCGATTATCCGCGCTGGCAGGGGCAGTGCAGTGCCTGTCATGCCTGGAACACCATCACCGAGGTGCGTCTTGCTGCGTCGCCAATGGTGGCGCGTAACGAGCGTCTCAGCGGCTATGCCGGTAGCGCCGGGGTGGCAAAAGTCCAGAAACTCTCCGATATCAGCCTTGAAGAGCTGCCGCGTTTTTCCACCGGATTTAAAGAGTTCGACCGCGTACTAGGCGGCGGCGTGGTGCCAGGAAGTGCCATTCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGCGACAGACCGCTGCCGCAGGATCTGGTGGTGTTTGGTGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAA", + "dna_sequence_length": 1383, + "functions": [ + "DNA repair protein" + ], + "id": "CDS_4305", + "location": [ + [ + "NC_000913", + 4625912, + "+", + 1383 + ] + ], + "md5": "cb6021e67d8a53ae2875fe60a0d78299", + "parent_gene": "", + "protein_md5": "0a91a9325e040d25feec5e930f5ea5a8", + "protein_translation": "MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014397" + ], + [ + "gene_synonym", + "ECK4382" + ], + [ + "gene_synonym", + "EcoGene:EG11335" + ], + [ + "gene_synonym", + "GI:90111746" + ], + [ + "gene_synonym", + "GeneID:948911" + ], + [ + "gene_synonym", + "JW5800" + ], + [ + "gene_synonym", + "NP_418807.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27278" + ], + [ + "gene_synonym", + "b4390" + ], + [ + "gene_synonym", + "nadI" + ], + [ + "gene_synonym", + "nadR" + ], + [ + "gene_synonym", + "pnuA" + ] + ], + "dna_sequence": "ATGTCGTCATTTGATTACCTGAAAACTGCCATCAAGCAACAGGGCTGCACGCTACAGCAGGTAGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTCGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAGCAACGGCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTTTTTGTGCGTACCGTGGCGATCCTTGGCGGCGAGTCGAGCGGTAAATCCACCCTGGTAAACAAACTTGCCAATATCTTCAACACCACCAGTGCGTGGGAATATGGCCGCGATTATGTCTTTTCACACCTCGGCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCGTGGGTGGCGGATGGTTTACGCAGCCTCGGCAGTTCGGTGGATCGCAAAGAGTTCCAGAACTTGCTGGTGGAGATGCTCGAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAA", + "dna_sequence_length": 1233, + "functions": [ + "trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor" + ], + "id": "CDS_4306", + "location": [ + [ + "NC_000913", + 4627315, + "+", + 1233 + ] + ], + "md5": "6d1df63578eeca69d85982242a2426cc", + "parent_gene": "", + "protein_md5": "c3b021ada18333c1b42899a480d98b5e", + "protein_translation": "MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIETVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEEDYDSRFLRCVELVREMMGEQR", + "protein_translation_length": 410, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014400" + ], + [ + "gene_synonym", + "ECK4383" + ], + [ + "gene_synonym", + "EcoGene:EG12343" + ], + [ + "gene_synonym", + "GI:16132208" + ], + [ + "gene_synonym", + "GeneID:948909" + ], + [ + "gene_synonym", + "JW4354" + ], + [ + "gene_synonym", + "NP_418808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9W3" + ], + [ + "gene_synonym", + "b4391" + ], + [ + "gene_synonym", + "ettA" + ], + [ + "gene_synonym", + "yjjK" + ] + ], + "dna_sequence": "GTGGCTCAATTCGTTTATACCATGCATCGTGTCGGCAAAGTTGTTCCGCCGAAACGTCATATTTTGAAAAACATCTCTCTGAGTTTCTTCCCTGGGGCAAAAATTGGTGTCCTGGGTCTGAATGGCGCGGGTAAGTCCACCCTGCTGCGCATTATGGCGGGCATTGATAAAGACATCGAAGGTGAAGCGCGTCCGCAGCCAGACATCAAGATTGGTTATCTGCCGCAGGAACCGCAGCTGAACCCGGAACACACCGTGCGTGAGTCCATTGAAGAAGCGGTTTCAGAAGTGGTTAACGCCCTGAAACGCCTGGATGAAGTGTATGCGCTGTACGCCGATCCGGATGCCGATTTTGACAAGCTGGCCGCTGAACAAGGCCGTCTGGAAGAGATCATTCAGGCTCACGACGGTCATAATCTGAACGTACAGCTGGAGCGTGCGGCGGATGCGCTACGTCTGCCGGACTGGGACGCGAAAATCGCTAACCTCTCCGGTGGTGAACGTCGTCGCGTAGCGTTGTGCCGCCTGCTGCTGGAAAAACCAGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGATGCCGAATCCGTGGCCTGGCTGGAACGCTTCCTGCACGACTTCGAAGGCACCGTTGTGGCGATTACCCACGACCGTTACTTCCTCGATAACGTTGCAGGCTGGATCCTCGAACTTGACCGCGGTGAAGGTATTCCGTGGGAAGGTAACTACTCCTCCTGGCTGGAGCAGAAAGATCAGCGCCTGGCGCAGGAAGCTTCACAAGAAGCGGCGCGTCGTAAGTCGATTGAGAAAGAGCTGGAATGGGTACGTCAAGGTACTAAAGGCCGTCAGTCGAAAGGTAAAGCACGTCTGGCGCGCTTTGAAGAACTGAACAGCACCGAATATCAGAAACGTAACGAAACCAACGAACTGTTTATTCCACCTGGACCGCGTCTGGGCGATAAAGTGCTGGAAGTCAGCAACCTGCGTAAATCCTATGGCGATCGTCTGCTGATTGATGACCTGAGCTTCTCGATCCCGAAAGGAGCGATCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAGCCGGACAGCGGCACCATCACTTTGGGTGAAACGGTGAAACTGGCGTCGGTTGATCAGTTCCGTGACTCAATGGATAACAGCAAAACCGTTTGGGAAGAAGTTTCCGGCGGGCTGGATATCATGAAGATCGGCAACACCGAGATGCCAAGCCGCGCCTACGTTGGCCGCTTTAACTTTAAAGGGGTTGATCAGGGTAAACGCGTTGGTGAACTCTCCGGTGGTGAGCGCGGTCGTCTGCATCTGGCGAAGCTGCTGCAGGTTGGCGGCAACATGCTGCTGCTCGACGAACCAACCAACGACCTGGATATCGAAACCCTGCGCGCGCTGGAAAACGCCCTGCTGGAGTTCCCGGGCTGTGCGATGGTTATCTCGCACGACCGTTGGTTCCTCGACCGTATCGCCACGCACATTCTGGATTACCAGGATGAAGGTAAAGTTGAGTTCTTCGAAGGTAACTTTACCGAGTACGAAGAGTACAAGAAACGCACGCTGGGCGCAGACGCGCTGGAGCCGAAGCGTATCAAGTACAAGCGTATTGCGAAGTAA", + "dna_sequence_length": 1668, + "functions": [ + "energy-dependent translational throttle A" + ], + "id": "CDS_4307", + "location": [ + [ + "NC_000913", + 4630522, + "-", + 1668 + ] + ], + "md5": "d44b52e086389efc5a36ee76ba772705", + "parent_gene": "", + "protein_md5": "d06e7beffcadb54bcd237e537c434a6c", + "protein_translation": "MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK", + "protein_translation_length": 555, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014404" + ], + [ + "gene_synonym", + "ECK4384" + ], + [ + "gene_synonym", + "EcoGene:EG10950" + ], + [ + "gene_synonym", + "GI:90111747" + ], + [ + "gene_synonym", + "GeneID:948908" + ], + [ + "gene_synonym", + "JW4355" + ], + [ + "gene_synonym", + "NP_418809.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC3" + ], + [ + "gene_synonym", + "b4392" + ], + [ + "gene_synonym", + "slt" + ], + [ + "gene_synonym", + "sltY" + ] + ], + "dna_sequence": "GTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGATAATCGACAAATGGATGTGGTCGAACAAATGATGCCTGGACTGAAGGATTATCCGCTTTATCCCTACCTGGAATACCGCCAGATCACCGATGATCTGATGAATCAACCGGCGGTGACGGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGTCTGCCTATGGAAGCGAAAGAGAAAGATGAATGGCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTATGCTTTCAACAACCAATGGTGGGATCTTAGCGTTCAGGCAACGATCGCCGGGAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCGGTTATAGCAGTCCTGGGCAATTGCTGGATCCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAGGGCGGGTGCGAACCTGGCTTGGCAACAGCGCCGGGCGTATCGACGCAGTGGCATTTGTCGAGAGTATTCCATTCTCCGAGACGCGCGGTTATGTGAAGAACGTGCTGGCTTATGACGCTTACTACCGCTATTTCATGGGGGATAAACCGACGTTGATGAGCGCCACGGAATGGGGACGTCGTTACTGA", + "dna_sequence_length": 1938, + "functions": [ + "lytic murein transglycosylase, soluble" + ], + "id": "CDS_4308", + "location": [ + [ + "NC_000913", + 4630733, + "+", + 1938 + ] + ], + "md5": "95c2d3bf9e1a13f47536409723571ca4", + "parent_gene": "", + "protein_md5": "1610adf754ede07a1bc172b5d4e5e7b3", + "protein_translation": "MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY", + "protein_translation_length": 645, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014408" + ], + [ + "gene_synonym", + "ECK4385" + ], + [ + "gene_synonym", + "EcoGene:EG11029" + ], + [ + "gene_synonym", + "GI:16132210" + ], + [ + "gene_synonym", + "GeneID:948917" + ], + [ + "gene_synonym", + "JW4356" + ], + [ + "gene_synonym", + "NP_418810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A881" + ], + [ + "gene_synonym", + "b4393" + ], + [ + "gene_synonym", + "trpR" + ] + ], + "dna_sequence": "ATGGCCCAACAATCACCCTATTCAGCAGCGATGGCAGAACAGCGTCACCAGGAGTGGTTACGTTTTGTCGACCTGCTTAAGAATGCCTACCAAAACGATCTCCATTTACCGTTGTTAAACCTGATGCTGACGCCAGATGAGCGCGAAGCGTTGGGGACTCGCGTGCGTATTGTCGAAGAGCTGTTGCGCGGCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGA", + "dna_sequence_length": 327, + "functions": [ + "transcriptional repressor, tryptophan-binding" + ], + "id": "CDS_4309", + "location": [ + [ + "NC_000913", + 4632760, + "+", + 327 + ] + ], + "md5": "13c282e6741216b6ff1bcee0743e9c6b", + "parent_gene": "", + "protein_md5": "1129ce31eceb1fd2c2e696746fb9ebd9", + "protein_translation": "MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014411" + ], + [ + "gene_synonym", + "ECK4386" + ], + [ + "gene_synonym", + "EcoGene:EG12600" + ], + [ + "gene_synonym", + "GI:90111748" + ], + [ + "gene_synonym", + "GeneID:948919" + ], + [ + "gene_synonym", + "JW5801" + ], + [ + "gene_synonym", + "NP_418811.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39411" + ], + [ + "gene_synonym", + "b4394" + ], + [ + "gene_synonym", + "yjjX" + ] + ], + "dna_sequence": "ATGCACCAAGTTGTCTGTGCGACCACCAATCCCGCTAAAATTCAGGCCATTCTGCAGGCATTTCACGAGATCTTCGGCGAAGGATCCTGCCATATTGCATCCGTTGCCGTCGAGAGCGGTGTACCGGAACAGCCCTTTGGCAGTGAGGAAACGCGCGCTGGCGCACGAAATCGGGTAGCCAATGCCCGCCGTTTACTTCCAGAGGCTGATTTTTGGGTGGCGATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGGCGAGGCGCGTTCGGCTACTTTGCCGTTGCCTGCGGTGATTCTGGAAAAAGTGCGTGAAGGTGAGGCGCTTGGTCCCGTGATGTCGCGTTATACCGGTATTGATGAGATTGGTCGTAAGGAAGGGGCGATCGGCGTGTTTACCGCCGGGAAACTCACTCGCGCCAGCGTCTATCACCAGGCGGTGATCCTGGCGCTGAGTCCGTTTCATAATGCCGTGTATTAA", + "dna_sequence_length": 513, + "functions": [ + "non-canonical purine NTP phosphatase, ITPase/XTPase" + ], + "id": "CDS_4310", + "location": [ + [ + "NC_000913", + 4633745, + "-", + 513 + ] + ], + "md5": "6fb0d301f084ba2292aaedb32cd4d206", + "parent_gene": "", + "protein_md5": "2e930eee5a4dca3e2883e9da4b48131c", + "protein_translation": "MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPLPAVILEKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVILALSPFHNAVY", + "protein_translation_length": 170, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014416" + ], + [ + "gene_synonym", + "ECK4387" + ], + [ + "gene_synonym", + "EcoGene:EG12164" + ], + [ + "gene_synonym", + "GI:16132212" + ], + [ + "gene_synonym", + "GeneID:948918" + ], + [ + "gene_synonym", + "JW4358" + ], + [ + "gene_synonym", + "NP_418812.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7A2" + ], + [ + "gene_synonym", + "b4395" + ], + [ + "gene_synonym", + "gpmB" + ], + [ + "gene_synonym", + "ytjC" + ] + ], + "dna_sequence": "ATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCAACCCGTGCCAAAGAGCTTGGCATTACGCATATCATCAGTAGCGATTTAGGACGCACCCGGCGTACGGCGGAAATCATCGCCCAGGCCTGCGGCTGTGACATCATCTTTGATTCTCGCCTGCGTGAATTAAACATGGGTGTGCTGGAAAAAAGACATATCGATTCTCTGACCGAAGAAGAAGAGAACTGGCGTCGGCAGCTGGTCAATGGCACCGTTGACGGGCGTATTCCTGAAGGCGAGTCAATGCAGGAGCTCAGCGATCGCGTCAATGCGGCACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAA", + "dna_sequence_length": 648, + "functions": [ + "phosphatase" + ], + "id": "CDS_4311", + "location": [ + [ + "NC_000913", + 4633797, + "+", + 648 + ] + ], + "md5": "88efdb0cc883b5647e194fbcdf50a5eb", + "parent_gene": "", + "protein_md5": "b9287a396936572817b1db247faaae97", + "protein_translation": "MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014420" + ], + [ + "gene_synonym", + "ECK4388" + ], + [ + "gene_synonym", + "EcoGene:EG11366" + ], + [ + "gene_synonym", + "GI:16132213" + ], + [ + "gene_synonym", + "GeneID:948916" + ], + [ + "gene_synonym", + "JW4359" + ], + [ + "gene_synonym", + "NP_418813.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACI0" + ], + [ + "gene_synonym", + "b4396" + ], + [ + "gene_synonym", + "cbpB" + ], + [ + "gene_synonym", + "rob" + ], + [ + "gene_synonym", + "robA" + ] + ], + "dna_sequence": "ATGGATCAGGCCGGCATTATTCGCGACCTTTTAATCTGGCTGGAAGGTCATCTGGATCAGCCCCTGTCGCTCGACAATGTAGCGGCGAAAGCAGGTTATTCCAAGTGGCACTTACAGAGAATGTTTAAAGATGTCACTGGCCATGCTATTGGCGCGTATATTCGTGCTCGTCGTTTGTCGAAATCGGCGGTCGCACTACGCCTGACTGCGCGTCCGATTCTGGACATCGCGCTGCAATACCGCTTCGACTCTCAACAGACATTTACCCGCGCATTCAAGAAGCAGTTTGCCCAGACTCCTGCACTTTACCGCCGTTCTCCTGAATGGAGCGCCTTTGGTATTCGCCCGCCGCTACGCCTGGGTGAATTCACTATGCCAGAGCACAAATTTGTCACCCTGGAAGATACGCCGCTGATTGGTGTTACCCAGAGCTACTCCTGTTCGCTGGAGCAAATCTCTGATTTCCGCCATGAAATGCGTTATCAGTTCTGGCACGATTTTCTCGGCAACGCGCCGACCATTCCGCCGGTGCTCTACGGCCTGAATGAAACGCGTCCGAGTCAGGATAAAGACGACGAGCAAGAGGTATTCTATACCACCGCGTTAGCCCAGGATCAGGCAGATGGCTATGTACTGACGGGGCATCCGGTGATGCTGCAGGGCGGCGAATATGTGATGTTTACCTATGAAGGTCTGGGAACCGGCGTGCAGGAGTTTATCCTGACGGTATACGGAACGTGCATGCCAATGCTCAACCTGACGCGCCGTAAAGGTCAGGATATTGAGCGATACTACCCGGCAGAAGATGCCAAAGCGGGAGATCGCCCAATTAATCTACGCTGTGAACTGCTGATTCCGATCCGTCGTTAA", + "dna_sequence_length": 870, + "functions": [ + "right oriC-binding transcriptional activator, AraC family" + ], + "id": "CDS_4312", + "location": [ + [ + "NC_000913", + 4635310, + "-", + 870 + ] + ], + "md5": "57427569a4e7fd9d4c0778a245be0a0c", + "parent_gene": "", + "protein_md5": "bc065e0b1cf7ff5683bfa06a591c9fc5", + "protein_translation": "MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014426" + ], + [ + "gene_synonym", + "ECK4389" + ], + [ + "gene_synonym", + "EcoGene:EG11217" + ], + [ + "gene_synonym", + "GI:16132214" + ], + [ + "gene_synonym", + "GeneID:948920" + ], + [ + "gene_synonym", + "JW4360" + ], + [ + "gene_synonym", + "NP_418814.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE91" + ], + [ + "gene_synonym", + "b4397" + ], + [ + "gene_synonym", + "creA" + ], + [ + "gene_synonym", + "yjjD" + ] + ], + "dna_sequence": "ATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCATGCCGTGGCGGCAATAA", + "dna_sequence_length": 474, + "functions": [ + "putative periplasmic protein" + ], + "id": "CDS_4313", + "location": [ + [ + "NC_000913", + 4635521, + "+", + 474 + ] + ], + "md5": "2afad2951fc0dbe5f19f3440afa81d2e", + "parent_gene": "", + "protein_md5": "d95d12290aaa87a91f47d25299cfb6ce", + "protein_translation": "MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ", + "protein_translation_length": 157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014428" + ], + [ + "gene_synonym", + "ECK4390" + ], + [ + "gene_synonym", + "EcoGene:EG11218" + ], + [ + "gene_synonym", + "GI:16132215" + ], + [ + "gene_synonym", + "GeneID:948922" + ], + [ + "gene_synonym", + "JW4361" + ], + [ + "gene_synonym", + "NP_418815.1" + ], + [ + "gene_synonym", + "ORF2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08368" + ], + [ + "gene_synonym", + "b4398" + ], + [ + "gene_synonym", + "creB" + ], + [ + "gene_synonym", + "yjjE" + ] + ], + "dna_sequence": "ATGCAACGGGAAACGGTCTGGTTAGTGGAAGATGAGCAAGGGATAGCCGACACGCTGGTCTACATGTTGCAGCAGGAAGGTTTTGCCGTCGAGGTCTTTGAGCGAGGCTTGCCGGTGCTGGATAAAGCTCGCAAGCAGGTACCCGACGTCATGATTCTCGATGTTGGTCTGCCGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAA", + "dna_sequence_length": 690, + "functions": [ + "response regulator in two-component regulatory system with CreC" + ], + "id": "CDS_4314", + "location": [ + [ + "NC_000913", + 4636007, + "+", + 690 + ] + ], + "md5": "c2e2f4faa8cdd0d810dc3a8aa888dd61", + "parent_gene": "", + "protein_md5": "1a7254421c3634fc4c1769b280bd30cf", + "protein_translation": "MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARKQVPDVMILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLRRVKKFSTPSPVIRIGHFELNEPAAQISWFDTPLALTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRGL", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014430" + ], + [ + "gene_synonym", + "ECK4391" + ], + [ + "gene_synonym", + "EcoGene:EG10730" + ], + [ + "gene_synonym", + "GI:16132216" + ], + [ + "gene_synonym", + "GeneID:948609" + ], + [ + "gene_synonym", + "JW4362" + ], + [ + "gene_synonym", + "NP_418816.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08401" + ], + [ + "gene_synonym", + "b4399" + ], + [ + "gene_synonym", + "creC" + ], + [ + "gene_synonym", + "phoM" + ] + ], + "dna_sequence": "ATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCTATTGCCCGGCTCACTCGCTATGCTGATTCCGTCACTGACAATAAGCCCGTTCCTCTCCCCGATCTCGGTAGTAGCGAGTTGCGTAAACTCGCGCAGGCGCTGGAAAGTATGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGCTGTTGATGTGGCGGCATTATTCCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAAAATCACTCTGCATGTTACGCCCACCGAGGTTAACGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGAAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAG", + "dna_sequence_length": 1425, + "functions": [ + "sensory histidine kinase in two-component regulatory system with CreB or PhoB" + ], + "id": "CDS_4315", + "location": [ + [ + "NC_000913", + 4636696, + "+", + 1425 + ] + ], + "md5": "9c2463585963d2bab59f2f06cd9b0784", + "parent_gene": "", + "protein_md5": "672a35a2e967d53f1ea6a756e33ab8a2", + "protein_translation": "MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDAQGKVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRLIGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKKITLHVTPTEVNVAAEPALLEQALGNLLDNAIDFTPESGCITLSAEVDQEHVTLKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGGVLASLRLHRHFT", + "protein_translation_length": 474, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014432" + ], + [ + "gene_synonym", + "ECK4392" + ], + [ + "gene_synonym", + "EcoGene:EG10145" + ], + [ + "gene_synonym", + "GI:16132217" + ], + [ + "gene_synonym", + "GeneID:948868" + ], + [ + "gene_synonym", + "JW4363" + ], + [ + "gene_synonym", + "NP_418817.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08369" + ], + [ + "gene_synonym", + "b4400" + ], + [ + "gene_synonym", + "cet" + ], + [ + "gene_synonym", + "creD" + ], + [ + "gene_synonym", + "refII" + ] + ], + "dna_sequence": "ATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCAATCAGAACGTGGAAGAACGCAAGATAGGGATTTATACCGGTCAGGTCTGGCACAGTGATTTAACGTTAAAAGCCGATTTCGATGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGATGTGGGGACTGCTCAACTCTGCCGATAGCGCGCTGTTGTTGGGAACCAGTGTGCTGGTGGTGGCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAA", + "dna_sequence_length": 1353, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_4316", + "location": [ + [ + "NC_000913", + 4638178, + "+", + 1353 + ] + ], + "md5": "db74c6d14ab6789c4aa3979607670210", + "parent_gene": "", + "protein_md5": "4b572b134243f8d4ddd88f968e1dd010", + "protein_translation": "MLKSPLFWKMTSLFGAVLLLLIPIMLIRQVIVERADYRSDVEDAIRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPGGRNSEMTLTSNWPHPSFLGDFLPAKREVSESGFQAHWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIGAIMNGIYLQAVLKGWCNSMLFTLALLLLDGVMWGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTTDDELRIWK", + "protein_translation_length": 450, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014434" + ], + [ + "gene_synonym", + "ECK4393" + ], + [ + "gene_synonym", + "EcoGene:EG10061" + ], + [ + "gene_synonym", + "GI:16132218" + ], + [ + "gene_synonym", + "GeneID:948874" + ], + [ + "gene_synonym", + "JW4364" + ], + [ + "gene_synonym", + "NP_418818.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Q1" + ], + [ + "gene_synonym", + "arcA" + ], + [ + "gene_synonym", + "b4401" + ], + [ + "gene_synonym", + "cpxC" + ], + [ + "gene_synonym", + "dye" + ], + [ + "gene_synonym", + "fexA" + ], + [ + "gene_synonym", + "msp" + ], + [ + "gene_synonym", + "seg" + ], + [ + "gene_synonym", + "sfrA" + ] + ], + "dna_sequence": "ATGCAGACCCCGCACATTCTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAAGTATTTTCGAAGCGGAAGGCTATGATGTTTTCGAAGCGACAGATGGCGCGGAAATGCATCAGATCCTCTCTGAATATGACATCAACCTGGTGATCATGGATATCAATCTGCCGGGTAAGAACGGTCTTCTGTTAGCGCGTGAACTGCGCGAGCAGGCGAATGTTGCGTTGATGTTCCTGACTGGCCGTGACAACGAAGTCGATAAAATTCTCGGCCTCGAAATCGGTGCAGATGACTACATCACCAAACCGTTCAACCCGCGTGAACTGACGATTCGTGCACGCAACCTACTGTCCCGTACCATGAATCTGGGTACTGTCAGCGAAGAACGTCGTAGCGTTGAAAGCTACAAGTTCAATGGTTGGGAACTGGACATCAACAGCCGTTCGTTGATCGGCCCTGATGGCGAGCAGTACAAGCTGCCGCGCAGCGAGTTCCGCGCCATGCTTCACTTCTGTGAAAACCCAGGCAAAATTCAGTCCCGTGCTGAACTGCTGAAGAAAATGACCGGCCGTGAGCTGAAACCGCACGACCGTACTGTAGACGTGACGATCCGCCGTATTCGTAAACATTTCGAATCTACGCCGGATACGCCGGAAATCATCGCCACCATTCACGGTGAAGGTTATCGCTTCTGCGGTGATCTGGAAGATTAA", + "dna_sequence_length": 717, + "functions": [ + "response regulator in two-component regulatory system with ArcB or CpxA" + ], + "id": "CDS_4317", + "location": [ + [ + "NC_000913", + 4640306, + "-", + 717 + ] + ], + "md5": "e452b8943ecd4b5e38543fbe36db1b29", + "parent_gene": "", + "protein_md5": "1917eff55d421295934a3e3ab9e8c178", + "protein_translation": "MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014437" + ], + [ + "gene_synonym", + "ECK4394" + ], + [ + "gene_synonym", + "EcoGene:EG12601" + ], + [ + "gene_synonym", + "GI:16132219" + ], + [ + "gene_synonym", + "GeneID:948925" + ], + [ + "gene_synonym", + "JW4365" + ], + [ + "gene_synonym", + "NP_418819.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD9" + ], + [ + "gene_synonym", + "b4402" + ], + [ + "gene_synonym", + "yjjY" + ] + ], + "dna_sequence": "ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAA", + "dna_sequence_length": 141, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4318", + "location": [ + [ + "NC_000913", + 4640402, + "+", + 141 + ] + ], + "md5": "774c8ad4517921114a55c82b4917d9a6", + "parent_gene": "", + "protein_md5": "833365d3c81d8fff0f42f49ee69d9fa9", + "protein_translation": "MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILTAT", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014442" + ], + [ + "gene_synonym", + "ECK4395" + ], + [ + "gene_synonym", + "EcoGene:EG12309" + ], + [ + "gene_synonym", + "GI:16132220" + ], + [ + "gene_synonym", + "GeneID:948924" + ], + [ + "gene_synonym", + "JW4366" + ], + [ + "gene_synonym", + "NP_418820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37005" + ], + [ + "gene_synonym", + "b4403" + ], + [ + "gene_synonym", + "lasT" + ], + [ + "gene_synonym", + "yjtD" + ] + ], + "dna_sequence": "ATGCGTATAACGATTATTCTGGTCGCACCCGCCAGAGCAGAAAATATTGGGGCAGCGGCGCGGGCAATGAAAACGATGGGGTTTAGCGATCTGCGGATTGTCGATAGTCAGGCACACCTGGAGCCAGCCACCCGCTGGGTCGCACATGGATCTGGTGATATTATTGATAATATTAAAGTTTTCCCGACATTGGCTGAATCGTTACACGATGTCGATTTCACTGTCGCCACCACTGCGCGCAGTCGGGCGAAATATCATTACTACGCCACGCCAGTTGAACTGGTGCCGCTGTTAGAGGAAAAATCTTCATGGATGAGCCATGCCGCGCTGGTGTTTGGTCGCGAAGATTCCGGGTTGACTAACGAAGAGTTAGCGTTGGCTGACGTTCTTACTGGTGTGCCGATGGTGGCGGATTATCCTTCGCTCAATCTGGGGCAGGCGGTGATGGTCTATTGCTATCAATTAGCAACATTAATACAACAACCGGCGAAAAGTGATGCAACGGCAGACCAACATCAACTGCAAGCTTTACGCGAACGAGCCATGACATTGCTGACGACTCTGGCAGTGGCAGATGACATAAAACTGGTCGACTGGTTACAACAACGCCTGGGGCTTTTAGAGCAACGAGACACGGCAATGTTGCACCGTTTGCTGCATGATATTGAAAAAAATATCACCAAATAA", + "dna_sequence_length": 687, + "functions": [ + "putative methyltransferase" + ], + "id": "CDS_4319", + "location": [ + [ + "NC_000913", + 4640942, + "+", + 687 + ] + ], + "md5": "bb3b817ca5149195111092e3115eca06", + "parent_gene": "", + "protein_md5": "c75e37d0bd96316e92f64e8a61352941", + "protein_translation": "MRITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDATADQHQLQALRERAMTLLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK", + "protein_translation_length": 228, + "type": "CDS" + } + ], + "dna_size": 4641652, + "domain": "Bacteria", + "external_source_origination_date": "16-DEC-2014", + "feature_counts": { + "CDS": 4319, + "mRNA": 0, + "non_coding_features": 0, + "protein_encoding_gene": 0 + }, + "features": [], + "gc_content": 0.50791, + "genetic_code": 11, + "genome_tiers": [ + "ExternalDB" + ], + "genome_type": "Unknown", + "id": "Escherichia_coli_str_K_12_substr_MG1655_RefSeq", + "md5": "afd67f98d72869f1e5b943aa9efd72af", + "molecule_type": "Unknown", + "mrnas": [], + "non_coding_features": [], + "num_contigs": 1, + "original_source_file_name": "GCF_000005845.2_ASM584v2_genomic.gbff", + "publications": [ + [ + 16397293, + "PubMed", + "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005", + "http://www.ncbi.nlm.nih.gov/pubmed/16397293", + "2006", + "Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.", + "Nucleic Acids Res. 34 (1), 1-9 (2006)" + ], + [ + 0, + "", + "Direct Submission", + "", + "15-NOV-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "02-SEP-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains", + "", + "", + "Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "30-JUL-2014", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "10-JUN-2004", + "Plunkett,G. III.", + "Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "06-FEB-2013", + "Rudd,K.E.", + "Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "07-FEB-2006", + "Plunkett,G. III.", + "Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Workshop on Annotation of Escherichia coli K-12", + "", + "", + "Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "26-SEP-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 9278503, + "PubMed", + "The complete genome sequence of Escherichia coli K-12", + "http://www.ncbi.nlm.nih.gov/pubmed/9278503", + "1997", + "Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y.", + "Science 277 (5331), 1453-1462 (1997)" + ], + [ + 0, + "NCBI Genome Project", + "Direct Submission", + "", + "26-AUG-2014", + "", + "Submitted (26-AUG-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "16-JAN-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 16738553, + "PubMed", + "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110", + "http://www.ncbi.nlm.nih.gov/pubmed/16738553", + "2006", + "Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.", + "Mol. Syst. Biol. 2, 2006 (2006)" + ], + [ + 0, + "", + "ASAP: Escherichia coli K-12 strain MG1655 version m56", + "", + "", + "Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.", + "Unpublished" + ], + [ + 0, + "", + "Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction", + "", + "", + "Perna,N.T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "13-OCT-1998", + "Plunkett,G. III.", + "Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "24-APR-2007", + "Rudd,K.E.", + "Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "A manual approach to accurate translation start site annotation: an E. coli K-12 case study", + "", + "", + "Rudd,K.E.", + "Unpublished" + ] + ], + "reference_annotation": 0, + "scientific_name": "Escherichia coli str. K-12 substr. MG1655", + "source": "RefSeq", + "source_id": "NC_000913", + "taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "type": "reference_test", + "warnings": [ + "For prokaryotes, CDS array should generally be the same length as the Features array.", + "Genome molecule_type Unknown is not expected for domain Bacteria.", + "Unable to determine organism taxonomy" + ] +} \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 7a93d816..84ebbc47 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -10,11 +10,14 @@ import urllib.parse import urllib.request from configparser import ConfigParser +from copy import deepcopy +from datetime import datetime from os import environ import requests # noqa: F401 from installed_clients.AssemblyUtilClient import AssemblyUtil +from installed_clients.AbstractHandleClient import AbstractHandle as HandleService from installed_clients.DataFileUtilClient import DataFileUtil from GenomeFileUtil.GenomeFileUtilImpl import GenomeFileUtil from GenomeFileUtil.GenomeFileUtilImpl import SDKConfig @@ -22,6 +25,16 @@ from GenomeFileUtil.authclient import KBaseAuth as _KBaseAuth from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService +from test_utils import check_result_object_info_provenance_data, PROVENANCE, METAGENOME, load_expected_data + +_KBASE_GENOME = "KBaseGenomes.Genome" +_KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + +_GENOME_FILE_WARNINGS = [ + 'For prokaryotes, CDS array should generally be the same length as the Features array.', + 'Genome molecule_type Unknown is not expected for domain Bacteria.', + 'Unable to determine organism taxonomy' +] class SaveGenomeTest(unittest.TestCase): @@ -58,6 +71,8 @@ def setUpClass(cls): cls.callback_url = os.environ['SDK_CALLBACK_URL'] cls.dfu = DataFileUtil(cls.callback_url) + cls.hs = HandleService(cls.cfg['handle-service-url'], token=cls.token) + cls.provenance = PROVENANCE cls.cfg['KB_AUTH_TOKEN'] = cls.token # build genome interface instance @@ -92,6 +107,7 @@ def setUpClass(cls): suffix = int(time.time() * 1000) cls.wsName = "test_SaveGenomeTest_" + str(suffix) cls.wsClient.create_workspace({'workspace': cls.wsName}) + cls.wsID = cls.dfu.ws_name_to_id(cls.wsName) cls.nodes_to_delete = [] cls.prepare_data() @@ -114,17 +130,61 @@ def delete_shock_node(cls, node_id): @classmethod def prepare_data(cls): - assembly_file_path = os.path.join(cls.scratch, - 'e_coli_assembly.fasta') + assembly_file_path = os.path.join(cls.scratch,'e_coli_assembly.fasta') + meta_file_path = os.path.join(cls.scratch,'metagenome.fa') + shutil.copy('data/e_coli/e_coli_assembly.fasta', assembly_file_path) + shutil.copy('data/metagenomes/toy/metagenome.fa', meta_file_path) + au = AssemblyUtil(os.environ['SDK_CALLBACK_URL']) - assembly_ref = au.save_assembly_from_fasta({ - 'workspace_name': cls.wsName, - 'assembly_name': 'e_coli.assembly', - 'file': {'path': assembly_file_path} - }) + assembly_refs = au.save_assemblies_from_fastas( + { + 'workspace_id': cls.wsID, + 'inputs': [ + { + 'assembly_name': 'e_coli.assembly', + 'file': assembly_file_path + }, + { + 'assembly_name': 'metagenome.assembly', + 'file': meta_file_path + } + ] + } + )["results"] + cls.test_genome_data = json.load(open('data/e_coli/e_coli.json')) - cls.test_genome_data['assembly_ref'] = assembly_ref + cls.test_genome_data['assembly_ref'] = assembly_refs[0]["upa"] + + cls.test_metagenome_data = METAGENOME + cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] + + # Define target paths in the shared folder + fhr_path = os.path.join(cls.scratch, 'features_handle_ref') + phr_path = os.path.join(cls.scratch, 'protein_handle_ref') + + # Create the files directly in the shared folder + with open(fhr_path, 'w', encoding='utf-8') as fhr_file: + fhr_file.write("test features_handle_ref") + + with open(phr_path, 'w', encoding='utf-8') as phr_file: + phr_file.write("test protein_handle_ref") + + # Upload files to the blobstore + handle_service_outputs = cls.dfu.file_to_shock_mass([ + {'file_path': fhr_path, 'make_handle': 1, 'pack': 'gzip'}, + {'file_path': phr_path, 'make_handle': 1, 'pack': 'gzip'} + ]) + + # Update metagenome + cls.test_metagenome_data["features_handle_ref"] = handle_service_outputs[0]["handle"]["hid"] + cls.test_metagenome_data["protein_handle_ref"] = handle_service_outputs[1]["handle"]["hid"] + + # Track shock_ids for cleanup + cls.nodes_to_delete.extend([ + handle_service_outputs[0]["shock_id"], + handle_service_outputs[1]["shock_id"] + ]) def getWsClient(self): return self.__class__.wsClient @@ -142,29 +202,58 @@ def start_test(self): testname = inspect.stack()[1][3] print(('\n*** starting test: ' + testname + ' **')) - def fail_save_one_genome(self, params, error, exception=ValueError, contains=False): + def fail_save_genome(self, params, error, exception=ValueError, contains=False, mass=False): with self.assertRaises(exception) as context: - self.getImpl().save_one_genome(self.ctx, params) + if mass: + self.genome_interface.save_genome_mass(params) + else: + self.getImpl().save_one_genome(self.ctx, params) if contains: self.assertIn(error, str(context.exception)) else: self.assertEqual(error, str(context.exception)) - def check_save_one_genome_output(self, ret, genome_name): + def check_save_one_genome_output( + self, + ret, + genome_name, + data_type=_KBASE_GENOME, + warnings=_GENOME_FILE_WARNINGS + ): self.assertTrue('info' in ret) + self.assertTrue('warnings' in ret) + # Check info genome_info = ret['info'] self.assertEqual(genome_info[1], genome_name) - self.assertEqual(genome_info[2].split('-')[0], 'KBaseGenomes.Genome') + self.assertEqual(genome_info[2].split('-')[0], data_type) + self.assertTrue(datetime.strptime(genome_info[3], '%Y-%m-%dT%H:%M:%S+%f')) + self.assertEqual(genome_info[5], self.user_id) + self.assertEqual(genome_info[6], self.wsID) + self.assertEqual(genome_info[7], self.wsName) + + # Check warnings + self.assertEqual(ret['warnings'], warnings) + + def check_hidden(self, object_id): + object_list = self.wsClient.list_objects( + {'workspaces': [self.wsName], 'minObjectID': object_id, 'maxObjectID': object_id} + ) + self.assertFalse(object_list) + + object_list = self.wsClient.list_objects( + {'workspaces': [self.wsName], 'showHidden':1, 'minObjectID': object_id, 'maxObjectID': object_id} + ) + self.assertTrue(object_list) def test_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', 'data': 'data'} - error_msg = '"workspace" parameter is required, but missing' - self.fail_save_one_genome(invalidate_params, error_msg) + error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" + self.fail_save_genome(invalidate_params, error_msg) def test_one_genome(self): self.start_test() @@ -177,26 +266,265 @@ def test_one_genome(self): def test_one_genome_with_hidden(self): self.start_test() - genome_name = 'test_genome_hidden' + genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, 'name': genome_name, 'data': self.test_genome_data, 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + self.check_hidden(ret["info"][0]) + genome_name = 'test_genome_hidden_2' params = {'workspace': self.wsName, 'name': genome_name, 'data': self.test_genome_data, 'hidden': True} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + self.check_hidden(ret["info"][0]) + + def _setup_handle(self, file_name, genome_data): + # Copy local genbank file to scratch dir + local_genbank_path = "data/e_coli/Ecoli_spoofing_test_genome.gbff" + file_path = os.path.join(self.scratch, file_name) + shutil.copy2(local_genbank_path, file_path) + + # Upload to blobstore + shock_ret = self.dfu.file_to_shock( + {"file_path": file_path, "make_handle": 1, "pack": "gzip"} + ) + + # Register this node for cleanup in the deletion + self.nodes_to_delete.append(shock_ret['shock_id']) + + # Return updated genome + genome_with_handle_ref = deepcopy(genome_data) + genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] + return genome_with_handle_ref + + def test_genomes(self): + self.start_test() + + genome_name1 = 'e_coli_test_genome_1.gbff' + genome_name2 = 'e_coli_test_genome_2.gbff' + + genome_with_genbank_handle_ref_1 = self._setup_handle(genome_name1, self.test_genome_data) + genome_with_genbank_handle_ref_2 = self._setup_handle(genome_name2, self.test_genome_data) + + file_names = [genome_name1, genome_name2] + expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d", "457e38b607e3f4c5800cbe608abee12d"] + + genome_metas = [ + { + "Taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "Size": "4641652", + "foo": "zoo", + "Source": "RefSeq", + "Name": "Escherichia coli str. K-12 substr. MG1655", + "GC content": "0.50791", + "Genetic code": "11", + "Number of Genome Level Warnings": "3", + "Source ID": "NC_000913", + "Number of Protein Encoding Genes": "0", + "Number contigs": "1", + "Domain": "Bacteria", + "Number of CDS": "4319", + "Genome Type": "Unknown", + "MD5": "afd67f98d72869f1e5b943aa9efd72af", + }, + { + "Taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "Size": "4641652", + "Source": "RefSeq", + "Name": "Escherichia coli str. K-12 substr. MG1655", + "GC content": "0.50791", + "Genetic code": "11", + "Number of Genome Level Warnings": "3", + "Source ID": "NC_000913", + "Number of Protein Encoding Genes": "0", + "Number contigs": "1", + "zoo": "foo", + "Domain": "Bacteria", + "Number of CDS": "4319", + "Genome Type": "Unknown", + "MD5": "afd67f98d72869f1e5b943aa9efd72af", + } + ] + + expected_genome_data = [ + load_expected_data("data/e_coli/e_coli_with_assembly_curated.json"), + load_expected_data("data/e_coli/e_coli_with_assembly_curated.json"), + ] + + inputs = [ + { + 'name': genome_name1, + 'data': genome_with_genbank_handle_ref_1, + 'meta': {"foo": "zoo"} + }, + { + 'name': genome_name2, + 'data': genome_with_genbank_handle_ref_2, + 'meta': {"zoo": "foo"} + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + results = self.genome_interface.save_genome_mass(params, validate_genome=True) + + # check genome result + check_result_object_info_provenance_data( + results, + file_names, + self.scratch, + self.wsClient, + self.hs, + self.dfu, + self.wsID, + self.wsName, + genome_metas, + self.provenance, + expected_genome_data, + expected_genome_md5sum + ) + + def test_genomes_with_hidden(self): + self.start_test() + genome_name = 'test_genomes_hidden_1' + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + 'hidden': 1, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_hidden(ret["info"][0]) + + genome_name = 'test_genomes_hidden_2' + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + 'hidden': True, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_hidden(ret["info"][0]) + + def test_genomes_with_upgrade(self): + self.start_test() + + genome_name = 'MyMetagenome' + metagenome_with_genbank_handle_ref = self._setup_handle(genome_name, self.test_metagenome_data) + + file_names = [genome_name] + expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d"] + genome_metas = [ + { + 'GC content': '0.64469', + 'Source ID': 'unknown', + 'Size': '538871', + 'cat': 'dog', + 'Number features': '40', + 'Number contigs': '1', + 'Number of Warnings': '1', + 'Source': 'GFF', + 'MD5': 'e2ccbd5a9bed0148015bd6b784e3c1c3' + } + ] + expected_genome_data = [ + { + "contig_ids": ["Ga0065724_100001"], + "contig_lengths": [538871], + "dna_size": 538871, + "domain": "Eukaryota", + "environment": None, + "external_source_origination_date": None, + "feature_counts": { + "CDS": 20, + "gene": 20, + "non_coding_features": 0, + "protein_encoding_gene": 20, + }, + "gc_content": 0.64469, + "genetic_code": 1, + "genome_type": "Metagenome", + "id": "MyMetagenome", + "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", + "molecule_type": "SingleLetterAlphabet", + "notes": None, + "num_contigs": 1, + "num_features": 40, + "ontologies_present": {}, + "ontology_events": [ + { + "id": "GO", + "method": "GenomeFileUtils Genbank uploader from annotations", + "method_version": "0.11.7", + } + ], + "original_source_file_name": None, + "publications": [], + "scientific_name": "Arabidopsis thaliana", + "source": "GFF", + "source_id": "unknown", + "suspect": 1, + "taxon_assignments": {"ncbi": "3702"}, + "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", + "warnings": [ + "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." + ], + } + ] + + inputs = [ + { + 'name': genome_name, + 'data': metagenome_with_genbank_handle_ref, + 'workspace_datatype': _KBASE_METAGENOME, + 'meta': {"cat": "dog"}, + 'upgrade': True, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + results = self.genome_interface.save_genome_mass(params) + + # check metagenome result + check_result_object_info_provenance_data( + results, + file_names, + self.scratch, + self.wsClient, + self.hs, + self.dfu, + self.wsID, + self.wsName, + genome_metas, + self.provenance, + expected_genome_data, + expected_genome_md5sum, + is_metagenome=True + ) + + def test_bad_genomes_params_missing_parameter(self): + self.start_test() + invalidate_params = { + 'workspace_id': self.wsID, + 'inputs': [{'data': 'data'}], + } + error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" + self.fail_save_genome(invalidate_params, error_msg, mass=True) def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() - self.genome_interface._check_dna_sequence_in_features(copied_genome) + self.genome_interface.check_dna_sequence_in_features(copied_genome) self.assertEqual(copied_genome, genome) # with contigs @@ -204,7 +532,7 @@ def test_GenomeInterface_check_dna_sequence_in_features(self): for feat in copied_genome['features']: if 'dna_sequence' in feat: del feat['dna_sequence'] - self.genome_interface._check_dna_sequence_in_features(copied_genome) + self.genome_interface.check_dna_sequence_in_features(copied_genome) feature_dna_sum = 0 for feature in copied_genome['features']: diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index 7a55066e..02a4445b 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -1,15 +1,9 @@ -import hashlib -import json import os import pytest -import re import shutil import time import unittest -import uuid from configparser import ConfigParser -from copy import deepcopy -from datetime import datetime from GenomeFileUtil.GenomeFileUtilImpl import GenomeFileUtil from GenomeFileUtil.GenomeFileUtilServer import MethodContext @@ -17,10 +11,8 @@ from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WorkspaceClient import Workspace as workspaceService from conftest import assert_exception_correct +from test_utils import check_result_object_info_provenance_data, PROVENANCE, load_expected_data -_UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') -_OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') -_PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') class GenomeFileUtilTest(unittest.TestCase): @classmethod @@ -29,44 +21,7 @@ def setUpClass(cls): # WARNING: don't call any logging methods on the context object, # it'll result in a NoneType error cls.ctx = MethodContext(None) - cls.provenance = [ - { - "service": "GenomeFileUtil", - "service_ver": "local-dev", - "method": "run_local_tests", - "method_params": [], - "input_ws_objects": [], - "resolved_ws_objects": [], - "intermediate_incoming": [], - "intermediate_outgoing": [], - "external_data": [], - "subactions": [ - { - "name": "GenomeFileUtil", - "ver": "local-dev", - "code_url": "https://localhost", - }, - { - "name": "AssemblyUtil", - "code_url": "https://github.com/kbaseapps/AssemblyUtil", - }, - { - "name": "DataFileUtil", - "code_url": "https://github.com/kbaseapps/DataFileUtil", - }, - { - 'name': 'GenomeAnnotationAPI', - 'code_url': 'https://github.com/kbase/genome_annotation_api', - }, - { - "name": "WsLargeDataIO", - "code_url": "https://github.com/kbaseapps/WsLargeDataIO", - }, - ], - "custom": {}, - "description": "KBase SDK method run via the KBase Execution Engine", - } - ] + cls.provenance = PROVENANCE cls.ctx.update( { 'token': token, @@ -86,6 +41,7 @@ def setUpClass(cls): cls.wsName = "test_GenomeFileUtil_" + str(suffix) cls.wsID = cls.wsClient.create_workspace({'workspace': cls.wsName})[0] cls.serviceImpl = GenomeFileUtil(cls.cfg) + cls.scratch = cls.cfg['scratch'] cls.dfuClient = DataFileUtil(os.environ['SDK_CALLBACK_URL']) cls.hs = HandleService(cls.cfg['handle-service-url'], token=token) cls.kbase_endpoint = cls.cfg['kbase-endpoint'] @@ -216,189 +172,6 @@ def _run_test_fail_mass(self, params, error_message): self.serviceImpl.genbanks_to_genomes(self.ctx, params) assert_exception_correct(got.value, ValueError(error_message)) - def _load_expected_data(self, json_path): - with open(json_path, "r") as read_file: - data = json.load(read_file) - return data - - def _dump_retrieved_data(self, json_path, dictionary): - with open(json_path, "w") as outfile: - json.dump(dictionary, outfile) - - def _get_blob_id(self, handle_id): - handles = self.hs.hids_to_handles([handle_id]) - blob_id = handles[0]['id'] - return blob_id - - def _download_file_from_blobstore(self, handle_id): - output_dir = self.cfg['scratch'] + "/" + str(uuid.uuid4()) - os.makedirs(output_dir) - file_ret = self.dfuClient.shock_to_file( - { - 'handle_id': handle_id, - 'file_path': output_dir, - 'unpack': 'unpack', - } - ) - return file_ret - - def _calculate_md5sum(self, file_path): - md5 = hashlib.md5() - with open(file_path, "rb") as f: - for chunk in iter(lambda: f.read(4096), b""): - md5.update(chunk) - return md5.hexdigest() - - def _retrieve_provenance(self, provenance): - # make a deep copy to avoid modifying the original provenance - provs = [prov.copy() for prov in provenance] - for prov in provs: - for key in ["time", "epoch"]: - prov.pop(key) - for subaction in prov['subactions']: - subaction.pop("commit") - if subaction["name"] != "GenomeFileUtil": - version = subaction.pop("ver") - assert _PROV_SUBACTION_VERSION_PATTERN.match(version) - return provs - - def _check_assembly_upa(self, retrieved_upa, expected_upa): - assert _UPA_PATTERN.match(retrieved_upa) - assert retrieved_upa == expected_upa - - def _retrieve_genome_metadata(self, metadata, expected_assembly_upa): - # make a deep copy to avoid modifying the original metadata - metadata = deepcopy(metadata) - retrieved_assembly_upa = metadata.pop("Assembly Object") - self._check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) - return metadata - - def _retrieve_genome_data(self, data, expected_assembly_ref): - # make a deep copy to avoid modifying the original genome data - data = deepcopy(data) - for key in ["cdss", "features", "mrnas", "non_coding_features"]: - for dist in data.get(key): - if dist.get("aliases"): - dist["aliases"] = sorted(dist["aliases"]) - - retrieved_assembly_ref = data.pop("assembly_ref") - assert _UPA_PATTERN.match(retrieved_assembly_ref) - assert retrieved_assembly_ref == expected_assembly_ref - - # check handle ref - handle_id = data.pop("genbank_handle_ref") - file_ret = self._download_file_from_blobstore(handle_id) - - file_path = file_ret['file_path'] - retrieved_node_filename = file_ret['node_file_name'] - retrieved_genome_md5sum = self._calculate_md5sum(file_path) - - for ontology_event in data.get("ontology_events", []): - ontology_event.pop("timestamp") - ontology_ref = ontology_event.pop("ontology_ref") - assert _UPA_PATTERN.match(ontology_ref) - - return data, retrieved_genome_md5sum, retrieved_node_filename - - def _retrieve_assembly_data(self, data): - # make a deep copy to avoid modifying the original assembly data - data = deepcopy(data) - - handle_id = data.pop("fasta_handle_ref") - assert handle_id.split("_")[0] == "KBH" - - handle_info = data["fasta_handle_info"] - blob_id = handle_info.pop("shock_id") - - handle = handle_info['handle'] - assert handle.pop('hid') == handle_id - assert handle.pop('id') == blob_id - - # check handle_id and blob_id are match - retrieved_blob_id = self._get_blob_id(handle_id) - assert retrieved_blob_id == blob_id - - # check handle ref - file_ret = self._download_file_from_blobstore(handle_id) - file_path = file_ret['file_path'] - retrieved_node_filename = file_ret['node_file_name'] - retrieved_assembly_md5sum = self._calculate_md5sum(file_path) - assert retrieved_assembly_md5sum == handle["remote_md5"] - - url = handle.get('url') - assert url.startswith('https://') - assert url.endswith('kbase.us/services/shock-api') - - return data, retrieved_assembly_md5sum, retrieved_node_filename - - def _get_object(self, result, is_genome): - ref = 'genome_ref' if is_genome else 'assembly_ref' - assert _OBJECT_VERSION_PATTERN.match(result[ref]) - return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] - - def _check_info(self, obj, result, file_name, expected_metadata, is_genome): - info = obj["info"] - assembly_upa = result["assembly_ref"] - object_info = 'genome_info' if is_genome else 'assembly_info' - object_name = file_name if is_genome else file_name + "_assembly" - object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' - retrieved_metadata = self._retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] - - assert info == result[object_info] - assert info[1] == object_name - assert info[2].split('-')[0] == object_type - - # check version - assert info[4] == 1 - # datetime.fromisoformat is not available in Python 3.6 or below - assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') - assert info[6] == self.wsID - assert info[7] == self.wsName - - # check metadata - assert retrieved_metadata == expected_metadata - - def _check_prov(self, obj, expected_provenance): - provenance = obj["provenance"] - retrieved_provenance = self._retrieve_provenance(provenance) - assert retrieved_provenance == expected_provenance - - def _check_data(self, obj, result, file_name, expected_data, expected_md5sum, is_genome): - data = obj["data"] - expected_assembly_ref = result["assembly_ref"] - - retrieved_data, retrieved_md5sum, retrieved_node_filename = ( - self._retrieve_genome_data(data, expected_assembly_ref) - if is_genome - else self._retrieve_assembly_data(data) - ) - - expected_node_filename = ( - file_name + ".gz" - if is_genome - else file_name + "_assembly.fasta" - ) - - assert retrieved_data == expected_data - assert retrieved_md5sum == expected_md5sum - assert retrieved_node_filename == expected_node_filename - - def _check_result_object_info_provenance_data( - self, - results, - file_names, - expected_metadata, - expected_provenance, - expected_data, - expected_md5sum, - is_genome=True, - ): - for idx, res in enumerate(results): - obj = self._get_object(res, is_genome) - self._check_info(obj, res, file_names[idx], expected_metadata[idx], is_genome) - self._check_prov(obj, expected_provenance) - self._check_data(obj, res, file_names[idx], expected_data[idx], expected_md5sum[idx], is_genome) - def test_genbank_to_genome_invalid_workspace(self): genome_name = "GCF_000970165.1_ASM97016v1_genomic.gbff.gz" params = { @@ -488,15 +261,15 @@ def test_genbanks_to_genomes(self): ] expected_genome_data = [ - self._load_expected_data("data/genome_curated/genome_Cyanidioschyzon_merolae_one_locus.json"), - self._load_expected_data("data/genome_curated/genome_mRNA_with_no_parent.json"), - self._load_expected_data("data/genome_curated/genome_ontology.json"), + load_expected_data("data/genome_curated/genome_Cyanidioschyzon_merolae_one_locus.json"), + load_expected_data("data/genome_curated/genome_mRNA_with_no_parent.json"), + load_expected_data("data/genome_curated/genome_ontology.json"), ] expected_assembly_data = [ - self._load_expected_data("data/genome_curated/assembly_Cyanidioschyzon_merolae_one_locus.json"), - self._load_expected_data("data/genome_curated/assembly_mRNA_with_no_parent.json"), - self._load_expected_data("data/genome_curated/assembly_ontology.json"), + load_expected_data("data/genome_curated/assembly_Cyanidioschyzon_merolae_one_locus.json"), + load_expected_data("data/genome_curated/assembly_mRNA_with_no_parent.json"), + load_expected_data("data/genome_curated/assembly_ontology.json"), ] expected_genome_md5sum = [ @@ -544,18 +317,30 @@ def test_genbanks_to_genomes(self): self.assertEqual(len(results), 3) # check genome result - self._check_result_object_info_provenance_data( + check_result_object_info_provenance_data( results, file_names, + self.scratch, + self.wsClient, + self.hs, + self.dfuClient, + self.wsID, + self.wsName, genome_metas, self.provenance, expected_genome_data, expected_genome_md5sum ) # check assembly result - self._check_result_object_info_provenance_data( + check_result_object_info_provenance_data( results, file_names, + self.scratch, + self.wsClient, + self.hs, + self.dfuClient, + self.wsID, + self.wsName, assembly_metas, self.provenance, expected_assembly_data, diff --git a/test/test_utils.py b/test/test_utils.py new file mode 100644 index 00000000..de243cfd --- /dev/null +++ b/test/test_utils.py @@ -0,0 +1,331 @@ +from copy import deepcopy +import hashlib +import json +import os +import re +from datetime import datetime +import uuid + +_UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') +_OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') +_PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') + +PROVENANCE = [ + { + "service": "GenomeFileUtil", + "service_ver": "local-dev", + "method": "run_local_tests", + "method_params": [], + "input_ws_objects": [], + "resolved_ws_objects": [], + "intermediate_incoming": [], + "intermediate_outgoing": [], + "external_data": [], + "subactions": [ + { + "name": "GenomeFileUtil", + "ver": "local-dev", + "code_url": "https://localhost", + }, + { + "name": "AssemblyUtil", + "code_url": "https://github.com/kbaseapps/AssemblyUtil", + }, + { + "name": "DataFileUtil", + "code_url": "https://github.com/kbaseapps/DataFileUtil", + }, + { + "name": "GenomeAnnotationAPI", + "code_url": "https://github.com/kbase/genome_annotation_api", + }, + { + "name": "WsLargeDataIO", + "code_url": "https://github.com/kbaseapps/WsLargeDataIO", + }, + ], + "custom": {}, + "description": "KBase SDK method run via the KBase Execution Engine", + } +] + +METAGENOME = { + "contig_ids": [ + "Ga0065724_100001" + ], + "contig_lengths": [ + 538871 + ], + "dna_size": 538871, + "domain": "Eukaryota", + "environment": None, + "external_source_origination_date": None, + "feature_counts": { + "CDS": 20, + "gene": 20, + "non_coding_features": 0, + "protein_encoding_gene": 20 + }, + "gc_content": 0.64469, + "genetic_code": 1, + "genome_type": "Metagenome", + "id": "MyMetagenome", + "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", + "molecule_type": "SingleLetterAlphabet", + "notes": None, + "num_contigs": 1, + "num_features": 40, + "ontologies_present": {}, + "ontology_events": [ + { + "id": "GO", + "method": "GenomeFileUtils Genbank uploader from annotations", + "method_version": "0.11.7", + "ontology_ref": "KBaseOntology/gene_ontology", + "timestamp": "2024_09_05_06_45_31" + } + ], + "original_source_file_name": None, + "publications": [], + "scientific_name": "Arabidopsis thaliana", + "source": "GFF", + "source_id": "unknown", + "suspect": 1, + "taxon_assignments": { + "ncbi": "3702" + }, + "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", + "warnings": [ + "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." + ] +} + +def check_result_object_info_provenance_data( + results, + file_names, + scratch_dir, + ws_client, + hs_client, + dfu_client, + expected_wsID, + expected_wsName, + expected_metadata, + expected_provenance, + expected_data, + expected_md5sum, + is_genome=True, + is_metagenome=False +): + for idx, res in enumerate(results): + expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) + obj = _get_object(ws_client, ref) + _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome) + _check_prov(obj, expected_provenance) + _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome, is_metagenome) + +def _get_info_and_ref(result, is_genome): + # Process the result returned by import_genbank_mass + if "genome_ref" in result and "assembly_ref" in result: + ref_type = "genome_ref" if is_genome else "assembly_ref" + object_info = "genome_info" if is_genome else "assembly_info" + + info = result[object_info] + ref = result[ref_type] + assembly_upa = result["assembly_ref"] + + # Process the result returned by save_genome_mass + elif "info" in result: + info = result["info"] + ref = f'{info[6]}/{info[0]}/{info[4]}' + assembly_upa = info[10]["Assembly Object"] + + else: + raise ValueError("Result must originate from either import_genbank_mass or save_genome_mass.") + + return info, ref, assembly_upa + +def _get_object(ws_client, ref): + assert _OBJECT_VERSION_PATTERN.match(ref) + return ws_client.get_objects2({"objects": [{'ref': ref}]})["data"][0] + +def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome): + info = obj["info"] + object_name = file_name if is_genome else file_name + "_assembly" + object_type = _get_object_type(is_genome, is_metagenome) + retrieved_metadata = _retrieve_genome_metadata(info[10], expected_assembly_upa) if is_genome else info[10] + + assert info == expected_info + assert info[1] == object_name + assert info[2].split('-')[0] == object_type + + # check version + assert info[4] == 1 + # datetime.fromisoformat is not available in Python 3.6 or below + assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') + assert info[6] == expected_wsID + assert info[7] == expected_wsName + + # check metadata + assert retrieved_metadata == expected_metadata + +def _get_object_type(is_genome, is_metagenome): + if is_metagenome: + return "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + if is_genome: + return "KBaseGenomes.Genome" + return "KBaseGenomeAnnotations.Assembly" + +def _retrieve_genome_metadata(metadata, expected_assembly_upa): + # make a deep copy to avoid modifying the original metadata + metadata = deepcopy(metadata) + retrieved_assembly_upa = metadata.pop("Assembly Object") + _check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) + return metadata + +def _check_assembly_upa(retrieved_upa, expected_upa): + assert _UPA_PATTERN.match(retrieved_upa) + assert retrieved_upa == expected_upa + +def _check_prov(obj, expected_provenance): + provenance = obj["provenance"] + retrieved_provenance = _retrieve_provenance(provenance) + assert retrieved_provenance == expected_provenance + +def _retrieve_provenance(provenance): + # make a deep copy to avoid modifying the original provenance + provs = [prov.copy() for prov in provenance] + for prov in provs: + for key in ["time", "epoch"]: + prov.pop(key) + for subaction in prov['subactions']: + subaction.pop("commit") + if subaction["name"] != "GenomeFileUtil": + version = subaction.pop("ver") + assert _PROV_SUBACTION_VERSION_PATTERN.match(version) + return provs + +def _check_data( + obj, + file_name, + scratch_dir, + hs_client, + dfu_client, + expected_data, + expected_md5sum, + expected_assembly_ref, + is_genome, + is_metagenome +): + data = obj["data"] + + retrieved_data, retrieved_md5sum, retrieved_node_filename = ( + _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, is_metagenome) + if is_genome + else _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data) + ) + + expected_node_filename = ( + file_name + ".gz" + if is_genome + else file_name + "_assembly.fasta" + ) + + assert retrieved_data == expected_data + assert retrieved_md5sum == expected_md5sum + assert retrieved_node_filename == expected_node_filename + +def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, is_metagenome): + # make a deep copy to avoid modifying the original genome data + data = deepcopy(data) + + for key in ["cdss", "features", "mrnas", "non_coding_features"]: + for dist in data.get(key, []): + if dist.get("aliases"): + dist["aliases"] = sorted(dist["aliases"]) + + retrieved_assembly_ref = data.pop("assembly_ref") + assert _UPA_PATTERN.match(retrieved_assembly_ref) + assert retrieved_assembly_ref == expected_assembly_ref + + # check features_handle_ref and protein_handle_ref + if is_metagenome: + features_handle_ref = data.pop("features_handle_ref") + protein_handle_ref = data.pop("protein_handle_ref") + + assert features_handle_ref.split("_")[0] == "KBH" + assert protein_handle_ref.split("_")[0] == "KBH" + + # check handle ref + handle_id = data.pop("genbank_handle_ref") + file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) + + file_path = file_ret['file_path'] + retrieved_node_filename = file_ret['node_file_name'] + retrieved_genome_md5sum = _calculate_md5sum(file_path) + + for ontology_event in data.get("ontology_events", []): + ontology_event.pop("timestamp") + ontology_ref = ontology_event.pop("ontology_ref") + assert _UPA_PATTERN.match(ontology_ref) + + return data, retrieved_genome_md5sum, retrieved_node_filename + +def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): + # make a deep copy to avoid modifying the original assembly data + data = deepcopy(data) + + handle_id = data.pop("fasta_handle_ref") + assert handle_id.split("_")[0] == "KBH" + + handle_info = data["fasta_handle_info"] + blob_id = handle_info.pop("shock_id") + + handle = handle_info['handle'] + assert handle.pop('hid') == handle_id + assert handle.pop('id') == blob_id + + # check handle_id and blob_id are match + retrieved_blob_id = _get_blob_id(hs_client, handle_id) + assert retrieved_blob_id == blob_id + + # check handle ref + file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) + file_path = file_ret['file_path'] + retrieved_node_filename = file_ret['node_file_name'] + retrieved_assembly_md5sum = _calculate_md5sum(file_path) + assert retrieved_assembly_md5sum == handle["remote_md5"] + + url = handle.get('url') + assert url.startswith('https://') + assert url.endswith('kbase.us/services/shock-api') + + return data, retrieved_assembly_md5sum, retrieved_node_filename + +def _download_file_from_blobstore(dfu_client, scratch_dir, handle_id): + output_dir = scratch_dir + "/" + str(uuid.uuid4()) + os.makedirs(output_dir) + file_ret = dfu_client.shock_to_file( + { + 'handle_id': handle_id, + 'file_path': output_dir, + 'unpack': 'unpack', + } + ) + return file_ret + +def _calculate_md5sum(file_path): + md5 = hashlib.md5() + with open(file_path, "rb") as f: + for chunk in iter(lambda: f.read(4096), b""): + md5.update(chunk) + return md5.hexdigest() + +def load_expected_data(json_path): + with open(json_path, "r") as read_file: + data = json.load(read_file) + return data + +def _get_blob_id(hs_client, handle_id): + handles = hs_client.hids_to_handles([handle_id]) + blob_id = handles[0]['id'] + return blob_id diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index 1340cb45..2472e6c9 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -1,8 +1,7 @@ +import mock import os -import shutil import time import unittest -import mock from configparser import ConfigParser from installed_clients.DataFileUtilClient import DataFileUtil @@ -33,8 +32,12 @@ def setUpClass(cls): cls.cfg[nameval[0]] = nameval[1] cls.wsURL = cls.cfg['workspace-url'] cls.wsClient = workspaceService(cls.wsURL, token=token) + cls.dfuClient = DataFileUtil(os.environ['SDK_CALLBACK_URL'], token=token, service_ver='dev') cls.serviceImpl = GenomeFileUtil(cls.cfg) - cls.token = token + + suffix = int(time.time() * 1000) + cls.wsName = "test_GenomeFileUtil_" + str(suffix) + cls.wsID = cls.wsClient.create_workspace({'workspace': cls.wsName})[0] @classmethod def tearDownClass(cls): @@ -42,42 +45,55 @@ def tearDownClass(cls): cls.wsClient.delete_workspace({'workspace': cls.wsName}) print('Test workspace was deleted') - def getWsClient(self): - return self.__class__.wsClient + def _prep_input(self, gbk_path, ws_obj_name, g2g_mass=False): - def getWsName(self): - if hasattr(self.__class__, 'wsName'): - return self.__class__.wsName - suffix = int(time.time() * 1000) - wsName = "test_GenomeFileUtil_" + str(suffix) - self.getWsClient().create_workspace({'workspace': wsName}) - self.__class__.wsName = wsName - return wsName + base_input = { + 'file': {'path': gbk_path}, + 'workspace_name': self.wsName, + 'genome_name': ws_obj_name, + 'generate_ids_if_needed': 1 + } + + if g2g_mass: - def getImpl(self): - return self.__class__.serviceImpl + base_input.pop('workspace_name') + return { + 'workspace_id': self.wsID, + 'inputs': [base_input] + } - def getContext(self): - return self.__class__.ctx + return base_input def test_full_sequence(self): # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. print("test_full_sequence") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'full_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "full_sequence", + self._check_full_sequence + ) + + def test_full_sequence_mass(self): + # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. + print("test_full_sequence_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "full_sequence", + self._check_full_sequence, + True, + ) + + def _test_sequence(self, gbk_path, ws_obj_name, check_seq_func, g2g_mass=False): + input_data = self._prep_input(gbk_path, ws_obj_name, g2g_mass) + if g2g_mass: + result = self.serviceImpl.genbanks_to_genomes(self.ctx, input_data)[0]["results"][0] + else: + result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + + check_seq_func(result) + + def _check_full_sequence(self, result): + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_without_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" not in feature: @@ -101,21 +117,25 @@ def test_full_sequence(self): def test_partial_sequence(self): # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. print("test_partial_sequence") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'partial_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "partial_sequence", + self._check_partial_sequence + ) + + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 14000000) + def test_partial_sequence_mass(self): + # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. + print("test_partial_sequence_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "partial_sequence", + self._check_partial_sequence, + True + ) + + def _check_partial_sequence(self, result): + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" in feature: @@ -139,21 +159,25 @@ def test_partial_sequence(self): def test_no_sequence_kept(self): # features, cds, and non_coding_features should not have sequences in it. print("test_no_sequence_kept") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'no_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "no_sequence", + self._check_no_sequence + ) + + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 9000000) + def test_no_sequence_kept_mass(self): + # features, cds, and non_coding_features should not have sequences in it. + print("test_no_sequence_kept_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "no_sequence", + self._check_no_sequence, + True + ) + + def _check_no_sequence(self, result): + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" in feature: @@ -174,4 +198,13 @@ def test_no_sequence_kept(self): @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 1) def test_max_genome_size(self): with self.assertRaisesRegex(ValueError, "This genome size of "): - GenomeInterface.validate_genome({"taxon_ref": "", "domain": ""}) \ No newline at end of file + GenomeInterface.validate_genome({"taxon_ref": "", "domain": ""}) + + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 1) + def test_max_genome_size_with_genbanks_to_genomes(self): + print("test_max_genome_size_with_genbanks_to_genomes") + gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" + ws_obj_name = 'large_genome_with_g2g_mass' + input_data = self._prep_input(gbk_path, ws_obj_name, g2g_mass=True) + with self.assertRaisesRegex(ValueError, "This genome size of "): + self.serviceImpl.genbanks_to_genomes(self.ctx, input_data)