[pre-commit.ci] auto fixes from pre-commit.com hooks

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Author: pre-commit-ci[bot]

src/obnb/__init__.py

@@ -1,4 +1,5 @@
 """Collection of network learning evaluation utilities."""
+
 from obnb import graph, label, model_trainer
 from obnb.dataset import Dataset, OpenBiomedNetBench
 from obnb.util.checkers import checkVersion

src/obnb/config/__init__.py

@@ -1,4 +1,5 @@
 """Configurations used by obnb."""
+
 from obnb.typing import Dict
 
 __all__ = [

src/obnb/data/__init__.py

@@ -1,4 +1,5 @@
 """Interface with various databases to retrieve data."""
+
 from obnb.data import annotated_ontology, annotation, network, ontology
 from obnb.data.annotated_ontology import (
     DISEASES,

src/obnb/data/annotated_ontology/__init__.py

@@ -1,4 +1,5 @@
 """Annotated ontology data."""
+
 from obnb.data.annotated_ontology.diseases import (
     DISEASES,
     DISEASES_ExperimentsFiltered,

src/obnb/data/annotation/__init__.py

@@ -1,4 +1,5 @@
 """Annotation data."""
+
 from obnb.data.annotation.diseases import DISEASESAnnotation
 from obnb.data.annotation.disgenet import DisGeNETAnnotation
 from obnb.data.annotation.gene_ontology import GeneOntologyAnnotation

src/obnb/data/experimental/__init__.py

@@ -8,6 +8,7 @@
     versions of the package.
 
 """
+
 from obnb.data.experimental.alevinfry import AlevinFry
 
 __all__ = [

src/obnb/data/network/__init__.py

@@ -1,4 +1,5 @@
 """Network data."""
+
 from obnb.data.network.biogrid import BioGRID
 from obnb.data.network.bioplex import BioPlex
 from obnb.data.network.comppi import ComPPIHumanInt

src/obnb/data/ontology/__init__.py

@@ -1,4 +1,5 @@
 """Ontology data."""
+
 from obnb.data.ontology.gene_ontology import GeneOntology
 from obnb.data.ontology.mondo import MondoDiseaseOntology
 

src/obnb/dataset/__init__.py

@@ -1,4 +1,5 @@
 """Dataset objects."""
+
 from obnb.dataset.base import Dataset
 from obnb.dataset.dataset import OpenBiomedNetBench
 from obnb.dataset.dataset_dgl import OpenBiomedNetBenchDGL

src/obnb/dataset/base.py

@@ -1,4 +1,5 @@
 """Dataset object."""
+
 import numpy as np
 from sklearn.preprocessing import KBinsDiscretizer