Imaging Data Commons

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66 repositories

CrossSegmentationExplorer
Public
Tools for verifying the result of AI segmentation.
Python
•
Apache License 2.0
•1•0•1•0•Updated Nov 19, 2025Nov 19, 2025
idc-slim
Public
Interoperable slide microscopy viewer for thin clients (CORE REPO)
core-repo idc-viewers
TypeScript
•
Apache License 2.0
•0•0•3•0•Updated Nov 19, 2025Nov 19, 2025
IDC-WebApp
Public
Web Application front end for IDC (CORE REPO)
core-repo
JavaScript
•
Apache License 2.0
•9•6•104•1•Updated Nov 19, 2025Nov 19, 2025
slim
Public
Interoperable web-based DICOM slide microscopy viewer and annotation tool
react oidc dicomweb digital-pathology idc-viewers
TypeScript
•
Apache License 2.0
•44•150•69•0•Updated Nov 19, 2025Nov 19, 2025
dicom-microscopy-viewer
Public
Web-based DICOM slide microscopy viewer library
javascript npm dicom openlayers dicomweb dicom-json idc-viewers
JavaScript
•
MIT License
•42•113•10•3•Updated Nov 19, 2025Nov 19, 2025
ViewersV3
Public
OHIF zero-footprint DICOM viewer tracking V3 (CORE REPO)
core-repo idc-viewers
TypeScript
•
MIT License
•4k•1•4•0•Updated Nov 19, 2025Nov 19, 2025
libdicom
Public
C library for reading DICOM files
c dicom medical-imaging
C
•
MIT License
•11•30•1•1•Updated Nov 19, 2025Nov 19, 2025
idc-index-data
Public
Python package providing the index to query and download data hosted by the NCI Imaging Data Commons
Python
•
MIT License
•4•1•3•1•Updated Nov 18, 2025Nov 18, 2025
SlicerIDCBrowser
Public
A 3D Slicer extension to support access to the content of NCI Imaging Data Commons
3d-slicer-extension
Python
•
BSD 3-Clause "New" or "Revised" License
•6•6•14•1•Updated Nov 18, 2025Nov 18, 2025
s5cmd-python-distributions
Public
This project provides the infrastructure to build s5cmd Python wheels.
Python
•
MIT License
•1•6•0•0•Updated Nov 18, 2025Nov 18, 2025
idc-index
Public
Python package to simplify access to the data available from NCI Imaging Data Commons
Python
•
MIT License
•9•18•27•1•Updated Nov 17, 2025Nov 17, 2025
ThrottleProxy
Public
(CORE REPO)
core-repo
Python
•
Apache License 2.0
•0•2•4•0•Updated Nov 14, 2025Nov 14, 2025
etl_flow
Public
(CORE REPO)
core-repo
Python
•
Apache License 2.0
•3•4•6•0•Updated Nov 14, 2025Nov 14, 2025
IDC-Common
Public
Shared code between repositories (CORE REPO)
core-repo
Python
•
Apache License 2.0
•4•0•0•1•Updated Nov 13, 2025Nov 13, 2025
highdicom
Public
High-level DICOM abstractions for the Python programming language
numpy dicom python3 pydicom typehints
Python
•
MIT License
•46•209•26•5•Updated Nov 13, 2025Nov 13, 2025
dicomweb-client
Public
Python client for DICOMweb RESTful services
numpy dicom python3 pytest python-requests dicomweb pydicom typehints
Python
•
MIT License
•41•124•11•5•Updated Nov 13, 2025Nov 13, 2025
idc-sm-annotations-conversion
Public
conversion dicom pathomics
Python
•
MIT License
•1•0•0•0•Updated Nov 12, 2025Nov 12, 2025
idc-downloader
Public
C++
•
Other
•1•0•1•0•Updated Nov 4, 2025Nov 4, 2025
IDC-Tutorials
Public
Self-guided notebook tutorials to help get started with IDC
Jupyter Notebook
•
BSD 3-Clause "New" or "Revised" License
•18•41•16•6•Updated Oct 29, 2025Oct 29, 2025
conversion_mirax_dicom
Public
Code for the conversion of BMDeep dataset in MRXS format to DICOM format
Python
•
BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Oct 24, 2025Oct 24, 2025
IDC-Cron
Public
Cron jobs run for IDC monitoring (CORE REPO)
core-repo
Python
•
Apache License 2.0
•0•0•0•1•Updated Oct 22, 2025Oct 22, 2025
download
Public
Browser-based code for accessing IDC data resources
HTML
•
Apache License 2.0
•0•1•5•0•Updated Oct 22, 2025Oct 22, 2025
IDC-Docs
Public
Source for IDC documentation
BSD 3-Clause "New" or "Revised" License
•3•5•7•1•Updated Oct 20, 2025Oct 20, 2025
idc-viewers-sandbox-gha-testing
Public
MIT License
•1•1•0•0•Updated Oct 15, 2025Oct 15, 2025
gcp-dicomweb-proxy
Public
Simple proxy to support un-authenticated access to Google Cloud DICOM stores
dicom dicomweb google-healthcare
JavaScript
•
Apache License 2.0
•1•2•0•0•Updated Oct 13, 2025Oct 13, 2025
CloudFunctions
Public
(CORE REPO)
core-repo
Python
•
Apache License 2.0
•0•2•0•0•Updated Oct 2, 2025Oct 2, 2025
.github
Public
MIT License
•0•0•0•0•Updated Oct 2, 2025Oct 2, 2025
github_analytics
Public
Scripts for monitoring and archival of GitHub insights for IDC-related repositories
Jupyter Notebook
•
BSD 3-Clause "New" or "Revised" License
•1•0•0•0•Updated Sep 20, 2025Sep 20, 2025
IDC-Admin
Public
Scripts to help in project admin (CORE REPO)
core-repo
Shell
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Apache License 2.0
•0•0•0•0•Updated Sep 18, 2025Sep 18, 2025
idc-comppath-reproducibility
Public
Classification of lung tumor slide images with the NCI Imaging Data Commons
machine-learning artificial-intelligence cloud-computing reproducibility fair-data computational-pathology
Jupyter Notebook
•
BSD 3-Clause "New" or "Revised" License
•0•2•0•0•Updated Sep 10, 2025Sep 10, 2025