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Merge pull request #3 from sicHiRsch/patch-1
changed RepeatMasker library filename
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Dockerfiles/RepeatMasker-onbuild/Dockerfile

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@@ -111,11 +111,11 @@ RUN wget http://www.repeatmasker.org/RepeatModeler/RepeatModeler-open-1.0.10.tar
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# I can't bundle the girinst RepBase libraries with the docker image,
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# so you'll need to get them yourself. Download them from
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# http://www.girinst.org/server/RepBase/protected/repeatmaskerlibraries/repeatmaskerlibraries-20140131.tar.gz
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# http://www.girinst.org/server/RepBase/protected/repeatmaskerlibraries/RepBaseRepeatMaskerEdition-20170127.tar.gz
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ONBUILD WORKDIR /usr/local/RepeatMasker
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ONBUILD ADD repeatmaskerlibraries.tar.gz /usr/local/RepeatMasker
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ONBUILD RUN cd /usr/local/RepeatMasker && util/buildRMLibFromEMBL.pl Libraries/RepeatMaskerLib.embl > Libraries/RepeatMasker.lib \
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ONBUILD RUN cd /usr/local/RepeatMasker && util/buildRMLibFromEMBL.pl Libraries/RMRBSeqs.embl > Libraries/RepeatMasker.lib \
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&& makeblastdb -dbtype nucl -in Libraries/RepeatMasker.lib > /dev/null 2>&1 \
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&& makeblastdb -dbtype prot -in Libraries/RepeatPeps.lib > /dev/null 2>&1
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