@@ -84,15 +84,26 @@ Now we load tidyprint for a tidy data display
8484``` r
8585library(tidyprint )
8686airway
87- # > class: RangedSummarizedExperiment
88- # > dim: 63677 8
89- # > metadata(1): ''
90- # > assays(1): counts
91- # > rownames(63677): ENSG00000000003 ENSG00000000005 ... ENSG00000273492
92- # > ENSG00000273493
93- # > rowData names(10): gene_id gene_name ... seq_coord_system symbol
94- # > colnames(8): SRR1039508 SRR1039509 ... SRR1039520 SRR1039521
95- # > colData names(9): SampleName cell ... Sample BioSample
87+ # > # A SummarizedExperiment-tibble abstraction: Features=63677 | Samples=8 |
88+ # > # Assays=counts
89+ # > # |----------------- COVARIATES ---------------|
90+ # > .feature .sample | counts | SampleName cell dex albut Run avgLength
91+ # > <chr> <chr> | <chr> | <fct> <fct> <fct> <fct> <fct> <chr>
92+ # > 1 ENSG0000… SRR103… | 679 | GSM1275862 N613… untrt untrt SRR1… 126
93+ # > 2 ENSG0000… SRR103… | 0 | GSM1275862 N613… untrt untrt SRR1… 126
94+ # > 3 ENSG0000… SRR103… | 467 | GSM1275862 N613… untrt untrt SRR1… 126
95+ # > 4 ENSG0000… SRR103… | 260 | GSM1275862 N613… untrt untrt SRR1… 126
96+ # > 5 ENSG0000… SRR103… | 60 | GSM1275862 N613… untrt untrt SRR1… 126
97+ # > -------- ------- - ------ - ---------- ---- --- ----- --- ---------
98+ # > 509412 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
99+ # > 509413 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
100+ # > 509414 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
101+ # > 509415 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
102+ # > 509416 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
103+ # > # ℹ 14 more variables: Experiment <fct>, Sample <fct>, BioSample <fct>,
104+ # > # `|` <|>, gene_id <chr>, gene_name <chr>, entrezid <chr>,
105+ # > # gene_biotype <chr>, gene_seq_start <chr>, gene_seq_end <chr>,
106+ # > # seq_name <chr>, seq_strand <chr>, seq_coord_system <chr>, symbol <chr>
96107```
97108
98109------------------------------------------------------------------------
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