Skip to content

Commit aa8840d

Browse files
committed
README update
1 parent a86907b commit aa8840d

File tree

1 file changed

+20
-9
lines changed

1 file changed

+20
-9
lines changed

README.md

Lines changed: 20 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -84,15 +84,26 @@ Now we load tidyprint for a tidy data display
8484
``` r
8585
library(tidyprint)
8686
airway
87-
#> class: RangedSummarizedExperiment
88-
#> dim: 63677 8
89-
#> metadata(1): ''
90-
#> assays(1): counts
91-
#> rownames(63677): ENSG00000000003 ENSG00000000005 ... ENSG00000273492
92-
#> ENSG00000273493
93-
#> rowData names(10): gene_id gene_name ... seq_coord_system symbol
94-
#> colnames(8): SRR1039508 SRR1039509 ... SRR1039520 SRR1039521
95-
#> colData names(9): SampleName cell ... Sample BioSample
87+
#> # A SummarizedExperiment-tibble abstraction: Features=63677 | Samples=8 |
88+
#> # Assays=counts
89+
#> # |----------------- COVARIATES ---------------|
90+
#> .feature .sample | counts | SampleName cell dex albut Run avgLength
91+
#> <chr> <chr> | <chr> | <fct> <fct> <fct> <fct> <fct> <chr>
92+
#> 1 ENSG0000… SRR103… | 679 | GSM1275862 N613… untrt untrt SRR1… 126
93+
#> 2 ENSG0000… SRR103… | 0 | GSM1275862 N613… untrt untrt SRR1… 126
94+
#> 3 ENSG0000… SRR103… | 467 | GSM1275862 N613… untrt untrt SRR1… 126
95+
#> 4 ENSG0000… SRR103… | 260 | GSM1275862 N613… untrt untrt SRR1… 126
96+
#> 5 ENSG0000… SRR103… | 60 | GSM1275862 N613… untrt untrt SRR1… 126
97+
#> -------- ------- - ------ - ---------- ---- --- ----- --- ---------
98+
#> 509412 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
99+
#> 509413 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
100+
#> 509414 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
101+
#> 509415 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
102+
#> 509416 ENSG0000… SRR103… | 0 | GSM1275875 N061… trt untrt SRR1… 98
103+
#> # ℹ 14 more variables: Experiment <fct>, Sample <fct>, BioSample <fct>,
104+
#> # `|` <|>, gene_id <chr>, gene_name <chr>, entrezid <chr>,
105+
#> # gene_biotype <chr>, gene_seq_start <chr>, gene_seq_end <chr>,
106+
#> # seq_name <chr>, seq_strand <chr>, seq_coord_system <chr>, symbol <chr>
96107
```
97108

98109
------------------------------------------------------------------------

0 commit comments

Comments
 (0)