Update generated requirements for JAX 0.9.0

docs/install_maxtext.md

@@ -124,9 +124,11 @@ You can find the latest commit hashes in the [JAX `build/` folder](https://githu
 
 Next, run the `seed-env` CLI to generate the new requirements files. You will need to do this separately for the TPU and GPU environments. The generated files will be placed in a directory specified by `--output-dir`.
 
-### For TPU
+> **Note:** The current `src/dependencies/requirements/generated_requirements/` in the repository were generated using JAX build commit: [d83b06508d669add43a8875ae7fd9e9fe7abf160](https://github.com/jax-ml/jax/commit/d83b06508d669add43a8875ae7fd9e9fe7abf160).
 
-Run the following command, replacing `<jax-build-commit-hash>` with the hash you copied in the previous step.
+### TPU Pre-Training
+
+If you have made changes to the pre-training dependencies in `src/dependencies/requirements/base_requirements/tpu-base-requirements.txt`, you need to regenerate the pinned pre-training requirements in `generated_requirements/` directory. Run the following command, replacing `<jax-build-commit-hash>` with the hash you copied in the previous step:
 
 ```bash
 seed-env \
@@ -138,53 +140,77 @@ seed-env \
   --output-dir=generated_tpu_artifacts
 ```
 
-### For GPU
+After generating the new requirements, you need to copy the generated files from `generated_tpu_artifacts/tpu-requirements.txt` to `src/dependencies/requirements/generated_requirements/tpu-requirements.txt`.
+
+#### TPU Post-Training
 
-Similarly, run the command for the GPU requirements.
+If you have made changes to the post-training dependencies in `src/dependencies/requirements/base_requirements/tpu-post-train-requirements.txt`, you need to regenerate the pinned post-training requirements in `generated_requirements/` directory. Run the following command, replacing `<jax-build-commit-hash>` with the hash you copied in the previous step:
 
 ```bash
 seed-env \
-  --local-requirements=src/dependencies/requirements/base_requirements/cuda12-base-requirements.txt \
+  --local-requirements=src/dependencies/requirements/base_requirements/tpu-post-train-requirements.txt \
   --host-name=MaxText \
   --seed-commit=<jax-build-commit-hash> \
   --python-version=3.12 \
-  --requirements-txt=cuda12-requirements.txt \
-  --hardware=cuda12 \
-  --output-dir=generated_gpu_artifacts
+  --requirements-txt=tpu-post-train-requirements.txt \
+  --output-dir=generated_tpu_post_train_artifacts
 ```
 
-## Step 4: Update Project Files
+After generating the new requirements, you need to copy the generated files from `generated_tpu_post_train_artifacts/tpu-post-train-requirements.txt` to `src/dependencies/requirements/generated_requirements/tpu-post-train-requirements.txt`.
 
-After generating the new requirements, you need to update the files in the MaxText repository.
+### GPU Pre-Training
 
-1. **Copy the generated files:**
+If you have made changes to the GPU pre-training dependencies in `src/dependencies/requirements/base_requirements/gpu-base-requirements.txt`, you need to regenerate the pinned pre-training requirements in `generated_requirements/` directory. Run the following command, replacing `<jax-build-commit-hash>` with the hash you copied in the previous step:
 
-   - Move `generated_tpu_artifacts/tpu-requirements.txt` to `generated_requirements/tpu-requirements.txt`.
-   - Move `generated_gpu_artifacts/cuda12-requirements.txt` to `generated_requirements/cuda12-requirements.txt`.
+```bash
+seed-env \
+  --local-requirements=src/dependencies/requirements/base_requirements/gpu-base-requirements.txt \
+  --host-name=MaxText \
+  --seed-commit=<jax-build-commit-hash> \
+  --python-version=3.12 \
+  --requirements-txt=cuda12-requirements.txt \
+  --hardware=cuda12 \
+  --output-dir=generated_gpu_artifacts
+```
 
-2. **Update `extra_deps_from_github.txt` (if necessary):**
-   Currently, MaxText uses a few dependencies, such as `mlperf-logging` and `google-jetstream`, that are installed directly from GitHub source. These are defined in `base_requirements/requirements.txt`, and the `seed-env` tool will carry them over to the generated requirements files.
+After generating the new requirements, you need to copy the generated files from `generated_gpu_artifacts/cuda12-requirements.txt` to `src/dependencies/requirements/generated_requirements/cuda12-requirements.txt`.
 
-## Step 5: Verify the New Dependencies
+## Step 4: Verify the New Dependencies
 
 Finally, test that the new dependencies install correctly and that MaxText runs as expected.
 
 1. **Create a clean environment:** It's best to start with a fresh Python virtual environment.
 
 ```bash
+# Ensure uv is installed
+pip install uv
+
+# Create and activate the virtual environment
 uv venv --python 3.12 --seed maxtext_venv
 source maxtext_venv/bin/activate
 ```
 
-2. **Run the setup script:** Execute `bash setup.sh` to install the new dependencies.
+2. **Install MaxText and dependencies**: Install the package in editable mode with the appropriate extras. Choose the command that matches your hardware:
+
+**TPU Pre-Training**:
 
 ```bash
-pip install uv
-# install the tpu package
 uv pip install -e .[tpu] --resolution=lowest
-# or install the gpu package by running the following line:
-# uv pip install -e .[cuda12] --resolution=lowest
-install_maxtext_github_deps
+install_maxtext_tpu_github_deps
+```
+
+**TPU Post-Training**:
+
+```bash
+uv pip install -e .[tpu-post-train] --resolution=lowest
+install_maxtext_tpu_post_train_extra_deps
+```
+
+**GPU Pre-Training**:
+
+```bash
+uv pip install -e .[cuda12] --resolution=lowest
+install_maxtext_cuda12_github_dep
 ```
 
-3. **Run tests:** Run MaxText tests to ensure there are no regressions.
+3. **Verify the installation**: Run MaxText tests to ensure everything is working as expected with the newly installed dependencies and there are no regressions.

src/dependencies/requirements/base_requirements/requirements.txt

@@ -1,8 +1,9 @@
 absl-py
 aqtp
 array-record
+chex
 cloud-accelerator-diagnostics
-cloud-tpu-diagnostics
+cloud-tpu-diagnostics!=1.1.14
 datasets
 drjax
 flax
@@ -40,9 +41,7 @@ tensorflow-datasets
 tensorflow-text
 tensorflow
 tiktoken
-tokamax
+tokamax!=0.1.0
 transformers
 uvloop
 qwix
-google-jetstream @ https://github.com/AI-Hypercomputer/JetStream/archive/29329e8e73820993f77cfc8efe34eb2a73f5de98.zip
-mlperf-logging @ https://github.com/mlcommons/logging/archive/38ab22670527888c8eb7825a4ece176fcc36a95d.zip

src/dependencies/requirements/base_requirements/tpu-base-requirements.txt

@@ -1,2 +1 @@
 -r requirements.txt
-google-tunix

src/dependencies/requirements/base_requirements/tpu-post-train-requirements.txt

@@ -0,0 +1,3 @@
+-r requirements.txt
+ipykernel
+papermill