Closes #111 update adrg to mention the json standard version dataset json v110 from cdisc

[bms63]

• Removed old files from Pilot 3 ADRG ( a lot of files 🗑️ )
• Appendix 2: Inserted Pilot 3 QC Findings from Wiki, Pilot 5 findings are minor and will be done later
• Appendix 3: Inserted text from wiki comparing 1.1 and 1.0 standards
• Conformance Summaries: comparison of two methods explanations and findings
• Cosmetic Updates
• Code updated to use version = 5 for xpt write out.

[github-actions]

Dataset QC Check Complete!

Date: 2025-09-26
Run by: bms63
Git Ref: refs/pull/123/merge
BASE: Pilot 5 Datasets
COMPARE: Pilot 3 Datasets

✅ Dataset: adadas

No issues were found!

✅ Dataset: adae

No issues were found!

✅ Dataset: adlbc

No issues were found!

✅ Dataset: adsl

No issues were found!

✅ Dataset: adtte

No issues were found!

[github-actions]

TLF QC Check Complete!

Date: 2025-09-26
Run by: bms63
Git Ref: refs/pull/123/merge
BASE: Pilot 5 Datasets
COMPARE: Pilot 3 Datasets

✅ Dataset: tlf-demographic-pilot5.out

old[36:40] vs new[36:40]
  "—————————————————————————————————————————————————————————————————————————————————————————————————"
  ""
  "Program: tlf-demographic.r "
- "2025-09-24 23:21:51.570937"
+ "2024-04-18 20:17:25"
  ""

✅ TLF: tlf-kmplot-pilot5.pdf - Score: 85

[1] "1. The second image has a visible grid pattern in the background while the first image has a plain white background. 2. The font size and style of the title appears slightly different - the second image has a bolder, more prominent title. 3. The legend positioning is slightly different - in the first image it appears more to the right, while in the second it's positioned more centrally. 4. The axis labels and tick marks appear to have slightly different formatting and spacing. 5. The confidence intervals (shaded areas) around the survival curves appear to have slightly different transparency/opacity levels. 6. The table at the bottom has minor formatting differences in terms of spacing and alignment. 7. The program information at the bottom shows different timestamps and version information. 8. The overall plot dimensions and aspect ratio appear slightly different between the two images."

✅ TLF: tlf-efficacy-pilot5.rtf - Score: 98

[1] "After careful examination of both images, I found these are essentially identical ANCOVA statistical tables showing 'Change from Baseline at Week 26'. Both tables contain the same data structure, values, and layout including: same title, identical column headers (Treatment groups, N values, Mean (SE) values for different doses), same row labels (Estimated High Dose vs Placebo, Estimated High Dose vs Medium), identical statistical values throughout all cells, same footnote text about ANCOVA model and treatment/baseline value covariates, and same overall formatting and spacing. The only potential differences might be extremely minor variations in image quality, compression, or pixel-level artifacts that don't affect the substantive content."

✅ TLF: tlf-primary-pilot5.rtf - Score: 100

[1] "After careful examination of both images, I found no detectable differences between them. Both images appear to be identical medical/clinical documents showing Patient CEH0609/Page 1 of 2 Precision Dosing form. The documents contain the same tabular data with identical values across all rows and columns, including: matching patient identifier (CEH0609), identical page numbering (1 of 2), same header text about 'Primary Diagnosis Analysis ADHD - using Ranger plus decision as listed at 1557', identical table structure with same row labels (MetaGIS, Normal Range, Weight etc.), matching numerical values throughout all data cells, identical formatting and layout, same footer text and disclaimers, and matching document structure with two similar table sections. The images appear to be exact duplicates with no visible variations in content, formatting, positioning, or quality."

[bms63]

Hi all!! Got some big updates for ADRG - if any one has time to review I would be much appreciated by EOD. If not, I will just merge in and keep trying to push forward.

Can always update ADRG later if issues are identified.