Skip to content
Draft
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
9 changes: 5 additions & 4 deletions Dockerfile
Original file line number Diff line number Diff line change
@@ -1,19 +1,20 @@
FROM kbase/sdkbase2:python
FROM kbase/sdkpython:3.8.0

MAINTAINER KBase Developer
# -----------------------------------------
# In this section, you can install any system dependencies required
# to run your App. For instance, you could place an apt-get update or
# install line here, a git checkout to download code, or run any other
# installation scripts.

RUN apt-get update
RUN apt-get install libgomp1
RUN apt-get update -y
RUN apt-get install libgomp1 unzip -y

ENV FASTANI_VERSION='v1.33'

RUN curl -LJO https://github.com/ParBLiSS/FastANI/releases/download/${FASTANI_VERSION}/fastANI-Linux64-${FASTANI_VERSION}.zip \
&& unzip fastANI-Linux64-${FASTANI_VERSION}.zip \
&& mv fastANI /miniconda/bin/
&& mv fastANI /usr/local/bin/

RUN pip install pipenv==2018.11.26

Expand Down