Avoid segmentation fault errors during CI tests#842

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leehart wants to merge 22 commits intomasterfrom

GH835_fix_segfault

Commits on Jan 13, 2026

WIP: debug segfault, ignore test_wgs_data_catalog[adir1_sim]
leehart
committed
WIP: debug segfault, ignore test_wgs_data_catalog[adir1_sim]
leehart
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WIP: debug segfault, ignore test_wgs_data_catalog[adir1_sim] in coverage.yml
leehart
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Use pd.Series for lookup_sample() to avoid lint error (pd.core.series.Series is not defined)
leehart
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Remove _extract_gff3_attribute. Use defined series to avoid linting error (Series[Any] not callable)
leehart
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Fix lint errors in _unpack_gff3_attributes
leehart
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Avoid using .apply in _unpack_gff3_attributes for type checking
leehart
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Ensure attributes in _unpack_gff3_attributes are dictionaries
leehart
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WIP: address linting failures in _unpack_gff3_attributes
leehart
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WIP: dev code comments in _unpack_gff3_attributes
leehart
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WIP: ignore all test_wgs_data_catalog cases (debug segfault)
leehart
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WIP: debug test_wgs_data_catalog (segfault)
leehart
committed

Commits on Jan 16, 2026

Commits on Jan 22, 2026