Feat: Implement a visualisation feature to NiTransforms by jmarabotto · Pull Request #212 · nipy/nitransforms

Commits on Jul 11, 2024

feat: Implement vis

Julien Marabotto
authored and
Julien Marabotto
committed
enh: Update plotting

Julien Marabotto
authored and
Julien Marabotto
committed
enh: Reworked figure formatting and code structure

Julien Marabotto
authored and
Julien Marabotto
committed
enh: code structure. Plotting now a class object.

Julien Marabotto
authored and
Julien Marabotto
committed
fix: remove straneous spaces

Julien Marabotto
authored and
Julien Marabotto
committed
fix: remove straneous spaces

Julien Marabotto
authored and
Julien Marabotto
committed
enh: code structure

Julien Marabotto
authored and
Julien Marabotto
committed
N/A

Julien Marabotto
authored and
Julien Marabotto
committed
enh: update progress on vis

Julien Marabotto
authored and
Julien Marabotto
committed
enh: Implemented function descriptions, reworked some lines.

Julien Marabotto
authored and
Julien Marabotto
committed
feat: First implementation of draft dsm plots.

Julien Marabotto
authored and
Julien Marabotto
committed
feat: First draft of vis.py

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: Addition of new, improved file vis_v2.py with new developments to plotting feature

Julien Marabotto
authored and
Julien Marabotto
committed
enh: 1. Implemented 3d quiver; 2. Updated formatting; 3. Updated function descriptions

Julien Marabotto
authored and
Julien Marabotto
committed
fix: Reworked file naming and versions

Julien Marabotto
authored and
Julien Marabotto
committed
fix: Relocate draft files

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: New file version, implemented divergence of deltas field. New (draft) interactive slider feature to switch between slices.

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: ajust location of draft files

Julien Marabotto
authored and
Julien Marabotto
committed
enh: finalised div map, removed normalised dsm plot. Prepared V5

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: fixed jacobian calculations, implemented jacobian-mapped scatter plot. Implemented function descriptors.

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: Created v6 and reorganised drafts

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: Created v6 and reorganised drafts

Julien Marabotto
authored and
Julien Marabotto
committed
fix: debug grid, partial fix

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: Finalised grid, code functional. Required: clean up files; clean up straneous comments and code; implement NotImplemented errors for sliders

Julien Marabotto
authored and
Julien Marabotto
committed
Enh: formatting

Julien Marabotto
authored and
Julien Marabotto
committed
Enh: Removed draft files, rename final vis.py

Julien Marabotto
authored and
Julien Marabotto
committed
fix: corrected descriptions

Julien Marabotto
authored and
Julien Marabotto
committed
enh: code structure

Julien Marabotto
authored and
Julien Marabotto
committed
remove example

Julien Marabotto
authored and
Julien Marabotto
committed
Enh: New file test_vis.py for implementation of tests. Added checks for slice values in vis.py, removed straneous imports and updated various comments.

Julien Marabotto
authored and
Julien Marabotto
committed
removed draft python files

Julien Marabotto
authored and
Julien Marabotto
committed
enh: Further additions to test_vis, output path for figures added to conftest

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: test 3d quiver fixed, fixed identical savefig filenames

Julien Marabotto
authored and
Julien Marabotto
committed
fix: accidentally running examples

Julien Marabotto
authored and
Julien Marabotto
committed

Commits on Jul 15, 2024

Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Enh: increase CodeCov coverage

Julien Marabotto
authored and
Julien Marabotto
committed
Enh: increase CodeCov coverage, pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix Pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed

Commits on Jul 16, 2024

Fix: RGB quiver plot failing if plotting transforms independent of one or more spatial dimensions (see someones_displacement_field.nii.gz). Fixed.

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Fix: pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
Feat: creation of notebook for vis module

Julien Marabotto
authored and
Julien Marabotto
committed

Commits on Jul 19, 2024

feat: plot linear, planar and spherical coefficient. Other code tidying.

Julien Marabotto
authored and
Julien Marabotto
committed
pacify flake8

Julien Marabotto
authored and
Julien Marabotto
committed
fix: mistakenly broke syntax

Julien Marabotto
authored and
Julien Marabotto
committed
enh: added tests for codecov

Julien Marabotto
authored and
Julien Marabotto
committed

Commits on Jul 23, 2024

Update nitransforms/tests/test_vis.py

jmarabotto
and
effigies
authored
Update nitransforms/tests/test_vis.py

jmarabotto
and
effigies
authored
Update nitransforms/vis.py

jmarabotto
and
effigies
authored
Update nitransforms/vis.py

jmarabotto
and
effigies
authored
Update nitransforms/vis.py

jmarabotto
and
effigies
authored
fix: pacify flake8, updated notebook

Julien Marabotto
authored and
Julien Marabotto
committed
fix? read the docs

Julien Marabotto
authored and
Julien Marabotto
committed

Feat: Implement a visualisation feature to NiTransforms#212jmarabotto wants to merge 82 commits intonipy:masternipy/nitransforms:masterfrom jmarabotto:feat/visjmarabotto/nitransforms:feat/visCopy head branch name to clipboard

Commits

Commits on Jul 11, 2024

Commits on Jul 15, 2024

Commits on Jul 16, 2024

Commits on Jul 19, 2024

Commits on Jul 23, 2024

Commits on Sep 16, 2024

Commits on Jul 18, 2025

Commits on Jul 19, 2025

Feat: Implement a visualisation feature to NiTransforms#212
jmarabotto wants to merge 82 commits intonipy:masterfrom
jmarabotto:feat/vis