Docs update, bump up coverage

.gitignore

@@ -1,5 +1,5 @@
 opacity/version.py
-
+.DS_Store
 
 # Byte-compiled / optimized / DLL files
 __pycache__/

.readthedocs.yaml

@@ -20,3 +20,4 @@ python:
       path: .
       extra_requirements:
         - docs
+        - all

README.rst

@@ -1,6 +1,14 @@
 opacity
 =======
 
+.. image:: https://github.com/opacities/opacity/actions/workflows/ci.yml/badge.svg
+   :target: https://github.com/opacities/opacity/actions/workflows/ci.yml
+
+.. image:: https://codecov.io/gh/opacities/opacity/branch/main/graph/badge.svg?token=DKM812Q0FU 
+   :target: https://codecov.io/gh/opacities/opacity
+
+
+
 Browse, retrieve, and cache opacity grids from MAESTRO stored on AWS S3.
 
 This package is currently under construction. You shouldn't rely on backwards compatibility until further notice.
@@ -11,5 +19,3 @@ MAESTRO
 * `About MAESTRO <https://github.com/opacities/.github/blob/main/profile/README.md>`_
 * `Submit your opacity grid to MAESTRO <https://github.com/opacities/submit-data>`_
 
-
-

docs/conf.py

@@ -75,14 +75,21 @@
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-# html_logo = "assets/logo.png"
-# html_favicon = "assets/logo.ico"
+html_logo = "_static/logo.png"
 
 html_theme_options = {
-    "use_download_button": True,
-    "repository_url": "https://github.com/opacities/opacity",
-    "repository_branch": "main",
-    "path_to_docs": "docs",
+    "logo": {
+        "text": "opacity",
+        "image": "_static/logo.png",
+    },
+    "icon_links": [
+        {
+            "name": "GitHub",
+            "url": "https://github.com/opacities/opacity",
+            "icon": "fa-brands fa-square-github",
+            "type": "fontawesome",
+        }
+    ]
 }
 
 numpydoc_show_class_members = False

docs/index.rst

@@ -9,6 +9,7 @@ This package is currently under construction. You shouldn't rely on backwards co
    :maxdepth: 1
    :caption: Contents:
 
+   getting_started.rst
    api.rst
 
 

opacity/tests/test_dataset.py

@@ -35,12 +35,31 @@
         ('VO', 'pressure', grid1460_pressure),
     ]
 )
-def test_open_dataset_coordinates(tmpdir, species, coord, expected):
+def test_open_dataset_cache_coordinates(tmpdir, species, coord, expected):
     tmp_path = os.path.join(tmpdir, species + '.zarr')
     local_cache_store = zarr.storage.LocalStore(tmp_path)
     ds = open_dataset(
         species=species,
+        cache_path=tmp_path,
         local_cache_store=local_cache_store,
         max_cache_size_gb=1e-3
     )
     assert all(ds[coord] == expected)
+
+
+@pytest.mark.remote_data
+@pytest.mark.parametrize(
+    "species, coord, expected", [
+        ('H2O', 'temperature', grid1460_temperature),
+        ('H2O', 'pressure', grid1460_pressure),
+        ('VO', 'temperature', grid1460_temperature),
+        ('VO', 'pressure', grid1460_pressure),
+    ]
+)
+def test_open_dataset_nocache_coordinates(tmpdir, species, coord, expected):
+    ds = open_dataset(
+        species=species,
+        cache=False,
+        max_cache_size_gb=1e-3
+    )
+    assert all(ds[coord] == expected)

pyproject.toml

@@ -35,7 +35,7 @@ test = [
 docs = [
     "sphinx",
     "sphinx-automodapi",
-    "sphinx-book-theme>=0.3.3",
+    "sphinx-book-theme",
     "numpydoc",
     "matplotlib",
 ]