Repositories list

• gateway-web

  Public
  TypeScript

  •

  Apache License 2.0

  •1•0•2•0•Updated Nov 27, 2025Nov 27, 2025

• search-service

  Public
  Go

  •1•0•0•0•Updated Nov 27, 2025Nov 27, 2025

• gateway-api

  Public
  gateway api 2.0

  PHP

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  Apache License 2.0

  •1•0•0•0•Updated Nov 27, 2025Nov 27, 2025

• traser

  Public
  JavaScript

  •

  Apache License 2.0

  •1•0•0•0•Updated Nov 27, 2025Nov 27, 2025

• GliomaML

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 17, 2025Nov 17, 2025

• depmine

  Public
  Python

  •0•0•0•0•Updated Nov 1, 2025Nov 1, 2025

• RNAgen

  Public
  Simulated bulk RNA-Seq sequencing for batch correction evaluation

  R

  •

  MIT License

  •1•0•0•0•Updated Sep 29, 2025Sep 29, 2025

• HarmonizeNN

  Public
  Adversarial autoencoder for bulk RNA‑seq batch effect correction that removes batch signal while preserving biological variation, outputting a corrected logCPM matrix and latent embeddings with optional supervised label preservation.

  Python

  •

  MIT License

  •1•0•0•0•Updated Sep 25, 2025Sep 25, 2025

• CRUK_filters

  Public
  JavaScript

  •1•0•0•0•Updated Aug 26, 2025Aug 26, 2025

• CRUK_filter_style

  Public
  JavaScript

  •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

• Synthetic-RNA-Seq-Raw-Counts-Generator

  Public
  Generates synthetic Bulk RNA-Seq raw count data in a easy to use Google Colab Sheet, accelerated using vectorization

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Apr 3, 2025Apr 3, 2025

• RNA-Seq-Preprocessing-Scripts

  Public
  This repository contains a collection of preprocessing scripts designed to help streamline data preparation tasks.

  Jupyter Notebook

  •1•1•0•0•Updated Mar 15, 2025Mar 15, 2025