[bot] update/containers-2025-08-27

quay.io/biocontainers/align_trim/container.yaml

@@ -0,0 +1,18 @@
+url: https://biocontainers.pro/tools/align_trim
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for align_trim
+latest:
+  1.0.1--pyhdfd78af_0: 
+    sha256:cf7a180e474aec951580411f67c0fd5915204a40ae8a2758eede7973d37f7ab3
+tags:
+  1.0.1--pyhdfd78af_0: 
+    sha256:cf7a180e474aec951580411f67c0fd5915204a40ae8a2758eede7973d37f7ab3
+docker: quay.io/biocontainers/align_trim
+aliases:
+  align_trim: /usr/local/bin/align_trim
+  primalbedtools: /usr/local/bin/primalbedtools
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  numpy-config: /usr/local/bin/numpy-config

quay.io/biocontainers/cactus-gfa-tools/container.yaml

@@ -0,0 +1,22 @@
+url: https://biocontainers.pro/tools/cactus-gfa-tools
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for cactus-gfa-tools
+latest:
+  0.1--h9948957_0: 
+    sha256:6fafebd3c38f4a45ea0f8427f9056fa9ce1a6e9bc96969cf76628381ba0dd0e9
+tags:
+  0.1--h9948957_0: 
+    sha256:6fafebd3c38f4a45ea0f8427f9056fa9ce1a6e9bc96969cf76628381ba0dd0e9
+docker: quay.io/biocontainers/cactus-gfa-tools
+aliases:
+  faprefix.sh: /usr/local/bin/faprefix.sh
+  gaf2paf: /usr/local/bin/gaf2paf
+  gaf2unstable: /usr/local/bin/gaf2unstable
+  gaffilter: /usr/local/bin/gaffilter
+  mzgaf2paf: /usr/local/bin/mzgaf2paf
+  paf2lastz: /usr/local/bin/paf2lastz
+  paf2stable: /usr/local/bin/paf2stable
+  pafcoverage: /usr/local/bin/pafcoverage
+  pafmask: /usr/local/bin/pafmask
+  rgfa-split: /usr/local/bin/rgfa-split
+  rgfa2paf: /usr/local/bin/rgfa2paf

quay.io/biocontainers/delve-bio/container.yaml

@@ -0,0 +1,12 @@
+url: https://biocontainers.pro/tools/delve-bio
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for delve-bio
+latest:
+  0.1.0--h4349ce8_0: 
+    sha256:1ac2a421f83ee9487c2888e75ea09bab42170c7e358a50c4506df03f53e01fbc
+tags:
+  0.1.0--h4349ce8_0: 
+    sha256:1ac2a421f83ee9487c2888e75ea09bab42170c7e358a50c4506df03f53e01fbc
+docker: quay.io/biocontainers/delve-bio
+aliases:
+  delve: /usr/local/bin/delve

quay.io/biocontainers/esme_esmf_psmpi_5_12_1/container.yaml

@@ -0,0 +1,52 @@
+url: https://biocontainers.pro/tools/esme_esmf_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_esmf_psmpi_5_12_1
+latest:
+  8.9.0--h499a0f0_0: 
+    sha256:f5e38d4db531abbbecbef41326ac2e702c06f19297644423d496a1c3ef4177dc
+tags:
+  8.9.0--h499a0f0_0: 
+    sha256:f5e38d4db531abbbecbef41326ac2e702c06f19297644423d496a1c3ef4177dc
+docker: quay.io/biocontainers/esme_esmf_psmpi_5_12_1
+aliases:
+  fido2-assert: /usr/local/bin/fido2-assert
+  fido2-cred: /usr/local/bin/fido2-cred
+  fido2-token: /usr/local/bin/fido2-token
+  pcc: /usr/local/bin/pcc
+  prte-info: /usr/local/bin/prte-info
+  prte-submit: /usr/local/bin/prte-submit
+  prte-term: /usr/local/bin/prte-term
+  scp: /usr/local/bin/scp
+  sftp: /usr/local/bin/sftp
+  ssh: /usr/local/bin/ssh
+  ssh-add: /usr/local/bin/ssh-add
+  ssh-agent: /usr/local/bin/ssh-agent
+  ssh-keygen: /usr/local/bin/ssh-keygen
+  ssh-keyscan: /usr/local/bin/ssh-keyscan
+  sshd: /usr/local/bin/sshd
+  prte: /usr/local/bin/prte
+  prte_info: /usr/local/bin/prte_info
+  prted: /usr/local/bin/prted
+  prterun: /usr/local/bin/prterun
+  pterm: /usr/local/bin/pterm
+  prun: /usr/local/bin/prun
+  ESMF_PrintInfo: /usr/local/bin/ESMF_PrintInfo
+  ESMF_PrintInfoC: /usr/local/bin/ESMF_PrintInfoC
+  ESMF_Regrid: /usr/local/bin/ESMF_Regrid
+  ESMF_RegridWeightGen: /usr/local/bin/ESMF_RegridWeightGen
+  ESMF_Scrip2Unstruct: /usr/local/bin/ESMF_Scrip2Unstruct
+  ESMF_WebServController: /usr/local/bin/ESMF_WebServController
+  ESMX_Builder: /usr/local/bin/ESMX_Builder
+  nc4print: /usr/local/bin/nc4print
+  ocprint: /usr/local/bin/ocprint
+  chacl: /usr/local/bin/chacl
+  getfacl: /usr/local/bin/getfacl
+  setfacl: /usr/local/bin/setfacl
+  cdfdiff: /usr/local/bin/cdfdiff
+  ncmpidiff: /usr/local/bin/ncmpidiff
+  ncmpidump: /usr/local/bin/ncmpidump
+  ncmpigen: /usr/local/bin/ncmpigen
+  ncoffsets: /usr/local/bin/ncoffsets
+  ncvalidator: /usr/local/bin/ncvalidator
+  pnetcdf-config: /usr/local/bin/pnetcdf-config

quay.io/biocontainers/esme_hdf5_psmpi_5_12_1/container.yaml

@@ -0,0 +1,37 @@
+url: https://biocontainers.pro/tools/esme_hdf5_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_hdf5_psmpi_5_12_1
+latest:
+  1.14.6--h43f4046_0: 
+    sha256:a222db65dcba893944904ac0e1cd75c2e7f844f3b98f05940f9cbde0d65cbe6b
+tags:
+  1.14.6--h43f4046_0: 
+    sha256:a222db65dcba893944904ac0e1cd75c2e7f844f3b98f05940f9cbde0d65cbe6b
+docker: quay.io/biocontainers/esme_hdf5_psmpi_5_12_1
+aliases:
+  chacl: /usr/local/bin/chacl
+  getfacl: /usr/local/bin/getfacl
+  setfacl: /usr/local/bin/setfacl
+  h5pcc: /usr/local/bin/h5pcc
+  h5perf: /usr/local/bin/h5perf
+  h5pfc: /usr/local/bin/h5pfc
+  ph5diff: /usr/local/bin/ph5diff
+  h5fuse: /usr/local/bin/h5fuse
+  attr: /usr/local/bin/attr
+  getfattr: /usr/local/bin/getfattr
+  setfattr: /usr/local/bin/setfattr
+  h5delete: /usr/local/bin/h5delete
+  h5clear: /usr/local/bin/h5clear
+  h5format_convert: /usr/local/bin/h5format_convert
+  h5watch: /usr/local/bin/h5watch
+  h5copy: /usr/local/bin/h5copy
+  h5debug: /usr/local/bin/h5debug
+  h5diff: /usr/local/bin/h5diff
+  h5import: /usr/local/bin/h5import
+  h5jam: /usr/local/bin/h5jam
+  h5ls: /usr/local/bin/h5ls
+  h5mkgrp: /usr/local/bin/h5mkgrp
+  h5perf_serial: /usr/local/bin/h5perf_serial
+  h5redeploy: /usr/local/bin/h5redeploy
+  h5repack: /usr/local/bin/h5repack

quay.io/biocontainers/esme_netcdf-c_psmpi_5_12_1/container.yaml

@@ -0,0 +1,19 @@
+url: https://biocontainers.pro/tools/esme_netcdf-c_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_netcdf-c_psmpi_5_12_1
+latest:
+  4.9.3--h5dc524c_0: 
+    sha256:066aac4c608d583b6e19db7b78aa0db36aa05523c935f482b08c37d558558bc0
+tags:
+  4.9.3--h5dc524c_0: 
+    sha256:066aac4c608d583b6e19db7b78aa0db36aa05523c935f482b08c37d558558bc0
+docker: quay.io/biocontainers/esme_netcdf-c_psmpi_5_12_1
+aliases:
+  nc4print: /usr/local/bin/nc4print
+  ocprint: /usr/local/bin/ocprint
+  nc-config: /usr/local/bin/nc-config
+  nccopy: /usr/local/bin/nccopy
+  ncdump: /usr/local/bin/ncdump
+  ncgen: /usr/local/bin/ncgen
+  ncgen3: /usr/local/bin/ncgen3

quay.io/biocontainers/esme_netcdf-fortran_psmpi_5_12_1/container.yaml

@@ -0,0 +1,13 @@
+url: https://biocontainers.pro/tools/esme_netcdf-fortran_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_netcdf-fortran_psmpi_5_12_1
+latest:
+  4.6.2--hb2a3317_0: 
+    sha256:142fd17166f0e587f6c7b74d6b234cace4a3edad5f5c044b1bbaee91a3d1a409
+tags:
+  4.6.2--hb2a3317_0: 
+    sha256:142fd17166f0e587f6c7b74d6b234cace4a3edad5f5c044b1bbaee91a3d1a409
+docker: quay.io/biocontainers/esme_netcdf-fortran_psmpi_5_12_1
+aliases:
+  nf-config: /usr/local/bin/nf-config

quay.io/biocontainers/esme_omb_psmpi_5_12_1/container.yaml

@@ -0,0 +1,52 @@
+url: https://biocontainers.pro/tools/esme_omb_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_omb_psmpi_5_12_1
+latest:
+  7.5.1--hcc2a5ad_0: 
+    sha256:9e8d077dec001629e03097a0bc79be0137963214fc9e8d8f51dc96212a30d4b2
+tags:
+  7.5.1--hcc2a5ad_0: 
+    sha256:9e8d077dec001629e03097a0bc79be0137963214fc9e8d8f51dc96212a30d4b2
+docker: quay.io/biocontainers/esme_omb_psmpi_5_12_1
+aliases:
+  fido2-assert: /usr/local/bin/fido2-assert
+  fido2-cred: /usr/local/bin/fido2-cred
+  fido2-token: /usr/local/bin/fido2-token
+  pcc: /usr/local/bin/pcc
+  prte-info: /usr/local/bin/prte-info
+  prte-submit: /usr/local/bin/prte-submit
+  prte-term: /usr/local/bin/prte-term
+  scp: /usr/local/bin/scp
+  sftp: /usr/local/bin/sftp
+  ssh: /usr/local/bin/ssh
+  ssh-add: /usr/local/bin/ssh-add
+  ssh-agent: /usr/local/bin/ssh-agent
+  ssh-keygen: /usr/local/bin/ssh-keygen
+  ssh-keyscan: /usr/local/bin/ssh-keyscan
+  sshd: /usr/local/bin/sshd
+  prte: /usr/local/bin/prte
+  prte_info: /usr/local/bin/prte_info
+  prted: /usr/local/bin/prted
+  prterun: /usr/local/bin/prterun
+  pterm: /usr/local/bin/pterm
+  prun: /usr/local/bin/prun
+  ucx_perftest_daemon: /usr/local/bin/ucx_perftest_daemon
+  mpichversion: /usr/local/bin/mpichversion
+  mpivars: /usr/local/bin/mpivars
+  genl-ctrl-list: /usr/local/bin/genl-ctrl-list
+  idiag-socket-details: /usr/local/bin/idiag-socket-details
+  nf-ct-add: /usr/local/bin/nf-ct-add
+  nf-ct-events: /usr/local/bin/nf-ct-events
+  nf-ct-list: /usr/local/bin/nf-ct-list
+  nf-exp-add: /usr/local/bin/nf-exp-add
+  nf-exp-delete: /usr/local/bin/nf-exp-delete
+  nf-exp-list: /usr/local/bin/nf-exp-list
+  nf-log: /usr/local/bin/nf-log
+  nf-monitor: /usr/local/bin/nf-monitor
+  nf-queue: /usr/local/bin/nf-queue
+  nl-addr-add: /usr/local/bin/nl-addr-add
+  nl-addr-delete: /usr/local/bin/nl-addr-delete
+  nl-addr-list: /usr/local/bin/nl-addr-list
+  nl-class-add: /usr/local/bin/nl-class-add
+  nl-class-delete: /usr/local/bin/nl-class-delete

quay.io/biocontainers/esme_pio_psmpi_5_12_1/container.yaml

@@ -0,0 +1,11 @@
+url: https://biocontainers.pro/tools/esme_pio_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_pio_psmpi_5_12_1
+latest:
+  2.6.6--hb2a3317_0: 
+    sha256:8bca4b7b0a03640c045af950110af44cf28d5d2a50fbc3244203aa679f46a090
+tags:
+  2.6.6--hb2a3317_0: 
+    sha256:8bca4b7b0a03640c045af950110af44cf28d5d2a50fbc3244203aa679f46a090
+docker: quay.io/biocontainers/esme_pio_psmpi_5_12_1

quay.io/biocontainers/esme_pnetcdf_psmpi_5_12_1/container.yaml

@@ -0,0 +1,20 @@
+url: https://biocontainers.pro/tools/esme_pnetcdf_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for 
+  esme_pnetcdf_psmpi_5_12_1
+latest:
+  1.14.1--hb2a3317_0: 
+    sha256:3abdd05facdeba0d70406c3244d78b80a29cd05bddc5848493238330045d5acd
+tags:
+  1.14.1--hb2a3317_0: 
+    sha256:3abdd05facdeba0d70406c3244d78b80a29cd05bddc5848493238330045d5acd
+docker: quay.io/biocontainers/esme_pnetcdf_psmpi_5_12_1
+aliases:
+  cdfdiff: /usr/local/bin/cdfdiff
+  ncmpidiff: /usr/local/bin/ncmpidiff
+  ncmpidump: /usr/local/bin/ncmpidump
+  ncmpigen: /usr/local/bin/ncmpigen
+  ncoffsets: /usr/local/bin/ncoffsets
+  ncvalidator: /usr/local/bin/ncvalidator
+  pnetcdf-config: /usr/local/bin/pnetcdf-config
+  pnetcdf_version: /usr/local/bin/pnetcdf_version

quay.io/biocontainers/esme_psmpi_5_12_1/container.yaml

@@ -0,0 +1,51 @@
+url: https://biocontainers.pro/tools/esme_psmpi_5_12_1
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for esme_psmpi_5_12_1
+latest:
+  1.0.2--psmpi__h90a7f1b_0: 
+    sha256:031dda342773d5a9fb721dfa96d6cbb2e721c6fd5fc6e68ced32d7631b632a22
+tags:
+  1.0.2--psmpi__h90a7f1b_0: 
+    sha256:031dda342773d5a9fb721dfa96d6cbb2e721c6fd5fc6e68ced32d7631b632a22
+docker: quay.io/biocontainers/esme_psmpi_5_12_1
+aliases:
+  fido2-assert: /usr/local/bin/fido2-assert
+  fido2-cred: /usr/local/bin/fido2-cred
+  fido2-token: /usr/local/bin/fido2-token
+  pcc: /usr/local/bin/pcc
+  prte-info: /usr/local/bin/prte-info
+  prte-submit: /usr/local/bin/prte-submit
+  prte-term: /usr/local/bin/prte-term
+  scp: /usr/local/bin/scp
+  sftp: /usr/local/bin/sftp
+  ssh: /usr/local/bin/ssh
+  ssh-add: /usr/local/bin/ssh-add
+  ssh-agent: /usr/local/bin/ssh-agent
+  ssh-keygen: /usr/local/bin/ssh-keygen
+  ssh-keyscan: /usr/local/bin/ssh-keyscan
+  sshd: /usr/local/bin/sshd
+  prte: /usr/local/bin/prte
+  prte_info: /usr/local/bin/prte_info
+  prted: /usr/local/bin/prted
+  prterun: /usr/local/bin/prterun
+  pterm: /usr/local/bin/pterm
+  prun: /usr/local/bin/prun
+  ESMF_PrintInfo: /usr/local/bin/ESMF_PrintInfo
+  ESMF_PrintInfoC: /usr/local/bin/ESMF_PrintInfoC
+  ESMF_Regrid: /usr/local/bin/ESMF_Regrid
+  ESMF_RegridWeightGen: /usr/local/bin/ESMF_RegridWeightGen
+  ESMF_Scrip2Unstruct: /usr/local/bin/ESMF_Scrip2Unstruct
+  ESMF_WebServController: /usr/local/bin/ESMF_WebServController
+  ESMX_Builder: /usr/local/bin/ESMX_Builder
+  gost12-256-hash: /usr/local/bin/gost12-256-hash
+  gost12-512-hash: /usr/local/bin/gost12-512-hash
+  edonr256-hash: /usr/local/bin/edonr256-hash
+  edonr512-hash: /usr/local/bin/edonr512-hash
+  ccmake: /usr/local/bin/ccmake
+  cmake: /usr/local/bin/cmake
+  cpack: /usr/local/bin/cpack
+  ctest: /usr/local/bin/ctest
+  ed2k-link: /usr/local/bin/ed2k-link
+  has160-hash: /usr/local/bin/has160-hash
+  magnet-link: /usr/local/bin/magnet-link
+  rhash: /usr/local/bin/rhash

quay.io/biocontainers/maaslin3/container.yaml

@@ -0,0 +1,30 @@
+url: https://biocontainers.pro/tools/maaslin3
+maintainer: '@vsoch'
+description: singularity registry hpc automated addition for maaslin3
+latest:
+  0.99.16--r44hdfd78af_0: 
+    sha256:4a7f3a2b58fc77a065f0715ef2b08267b7501eddcda4e549c3ec03e93df96011
+tags:
+  0.99.16--r44hdfd78af_0: 
+    sha256:4a7f3a2b58fc77a065f0715ef2b08267b7501eddcda4e549c3ec03e93df96011
+docker: quay.io/biocontainers/maaslin3
+aliases:
+  x86_64-conda-linux-gnu.cfg: /usr/local/bin/x86_64-conda-linux-gnu.cfg
+  idle3.13: /usr/local/bin/idle3.13
+  pydoc3.13: /usr/local/bin/pydoc3.13
+  python3.13: /usr/local/bin/python3.13
+  python3.13-config: /usr/local/bin/python3.13-config
+  numpy-config: /usr/local/bin/numpy-config
+  installBiocDataPackage.sh: /usr/local/bin/installBiocDataPackage.sh
+  tomlq: /usr/local/bin/tomlq
+  xq: /usr/local/bin/xq
+  yq: /usr/local/bin/yq
+  jq: /usr/local/bin/jq
+  onig-config: /usr/local/bin/onig-config
+  activate-global-python-argcomplete: 
+    /usr/local/bin/activate-global-python-argcomplete
+  python-argcomplete-check-easy-install-script: 
+    /usr/local/bin/python-argcomplete-check-easy-install-script
+  register-python-argcomplete: /usr/local/bin/register-python-argcomplete
+  hb-info: /usr/local/bin/hb-info
+  tjbench: /usr/local/bin/tjbench