docs: paper#111

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cmeesters wants to merge 20 commits intomainfrom

Commits on Apr 7, 2025

docs: first paper draft
cmeesters
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Commits on Jun 25, 2025

Commits on Jun 30, 2025

docs: removed unused references from bibiliography and updated remaining references
yeising
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docs: added Usage section, extended workflow example section, minor draft adjustments
yeising
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Commits on Jul 1, 2025