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No DP in VCF getting error when using kirsp_vcf

Status: Open.

#34 In grunwaldlab/krisp;

· buchanri opened on Apr 21, 2025

Discrepancy between table and alignment output

Status: Open.

#33 In grunwaldlab/krisp;

· cahuparo opened on Sep 24, 2024

data availability for reproducing steps and refactoring

Status: Open.

#32 In grunwaldlab/krisp;

· tavallaie opened on Aug 28, 2024

TypeError: unsupported operand type(s) for +: 'int' and 'NoneType'

Status: Open.

#30 In grunwaldlab/krisp;

· Janehol opened on Jul 18, 2024

KeyError: 'invalid FORMAT: GQ'

Status: Open.

#29 In grunwaldlab/krisp;

· Janehol opened on Jul 9, 2024

Mismatching csv output and text alignment output

Status: Open.

#28 In grunwaldlab/krisp;

· buchanri opened on Apr 2, 2024

Options to decrease run time

Status: Open.

#27 In grunwaldlab/krisp;

· buchanri opened on Nov 7, 2023

Error first time an index is built

Status: Open.

#26 In grunwaldlab/krisp;

· zachary-foster opened on Oct 26, 2023

Index is built each time an uncompressed .vcf file is used as input

bugSomething isn't workingSomething isn't working

Status: Open.

#25 In grunwaldlab/krisp;

· zachary-foster opened on Oct 25, 2023

place variants in center of acceptable range when possible, but check for other options

Status: Open.

#24 In grunwaldlab/krisp;

· zachary-foster opened on Oct 18, 2023

krisp_fasta csv file improvement

Status: Open.

#23 In grunwaldlab/krisp;

· cahuparo opened on Oct 18, 2023

krisp_fasta: ingroup sequeneces not conserved

Status: Open.

#18 In grunwaldlab/krisp;

· zachary-foster opened on May 10, 2023