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Adding test data for TEtranscripts module #1829

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Merged
hanalysis merged 2 commits into from
Mar 30, 2026
Merged

Adding test data for TEtranscripts module #1829

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1c44ecb
Repeatmasker file for TEtranscripts module
hanalysis Jan 9, 2026
90bebf9
Update README.md
hanalysis Jan 9, 2026
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1 change: 1 addition & 0 deletions README.md
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Expand Up @@ -347,6 +347,7 @@ The earth sciences folder contain subfolders for different data formats encounte
- .cnn: copy number reference file for chr_21
- .snp: Eigenstrat snp file of 1240k snps on chr 21
- dbsnp_138.hg38.first_10_biallelic_sites.tsv: first 10 biallelic snp positions and alleles for use with the stitch module.
- GRCh38_GENCODE_rmsk_TE_chr21.gtf - repeatmasker annotation for human chr21 with additional transposable element information
- germlineresources: directory containing several germline resource vcfs and tbis, including:
- 1000G_omni2.5
- 1000G_phase1.snps
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